Your job contains 1 sequence.
>psy9822
MSGCRHLYGMSGQVAYTLEPRTVKTDANRTNIKLKTGSSCPLRCDQRTDCQDCLTSSGGE
GGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAH
CGWCALQRDTTGGMGVCTEGSLNSPSSGPESSTCDILFYQTYPDQVIEVNNNDSFSWNYV
KCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCS
EPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDP
RDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNH
TTGPKCEDCVEGKENRQSRN
The BLAST search returned 12 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9822
(380 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0031981 - symbol:CG7466 species:7227 "Drosophila m... 990 4.7e-100 2
RGD|621190 - symbol:Megf8 "multiple EGF-like-domains 8" s... 531 9.5e-64 2
UNIPROTKB|F1RGK2 - symbol:MEGF8 "Uncharacterized protein"... 531 1.5e-63 2
UNIPROTKB|Q7Z7M0 - symbol:MEGF8 "Multiple epidermal growt... 527 1.6e-63 2
MGI|MGI:2446294 - symbol:Megf8 "multiple EGF-like-domains... 527 2.0e-63 2
UNIPROTKB|E2RM39 - symbol:MEGF8 "Uncharacterized protein"... 524 5.2e-63 2
ZFIN|ZDB-GENE-090730-1 - symbol:megf8 "multiple EGF-like-... 528 5.2e-55 4
UNIPROTKB|E1BPS6 - symbol:MEGF8 "Uncharacterized protein"... 536 5.1e-53 2
ZFIN|ZDB-GENE-090312-21 - symbol:atrn "attractin" species... 204 6.0e-16 3
UNIPROTKB|Q8MJ16 - symbol:ATRN "Uncharacterized protein" ... 216 6.4e-16 2
MGI|MGI:1341628 - symbol:Atrn "attractin" species:10090 "... 229 7.4e-16 1
RGD|69063 - symbol:Atrn "attractin" species:10116 "Rattus... 229 7.4e-16 1
UNIPROTKB|F1MXV1 - symbol:ATRNL1 "Uncharacterized protein... 199 9.5e-16 2
UNIPROTKB|E1BYK5 - symbol:ATRNL1 "Uncharacterized protein... 205 1.3e-15 2
UNIPROTKB|I3LUK3 - symbol:ATRNL1 "Uncharacterized protein... 197 1.3e-15 2
UNIPROTKB|E2R6C0 - symbol:ATRNL1 "Uncharacterized protein... 195 3.2e-15 2
UNIPROTKB|F1Q117 - symbol:ATRN "Uncharacterized protein" ... 218 5.1e-15 2
UNIPROTKB|Q5VV63 - symbol:ATRNL1 "Attractin-like protein ... 201 5.2e-15 2
UNIPROTKB|F1M2P5 - symbol:Atrnl1 "Protein Atrnl1" species... 208 5.7e-15 2
UNIPROTKB|O75882 - symbol:ATRN "Attractin" species:9606 "... 218 6.3e-15 2
UNIPROTKB|F1M3T8 - symbol:Atrnl1 "Protein Atrnl1" species... 206 7.5e-15 2
MGI|MGI:2147749 - symbol:Atrnl1 "attractin like 1" specie... 215 7.8e-15 2
UNIPROTKB|K7GNE0 - symbol:ATRN "Uncharacterized protein" ... 218 1.2e-14 1
UNIPROTKB|F1S8B6 - symbol:ATRN "Uncharacterized protein" ... 218 1.4e-14 1
UNIPROTKB|F1P2W2 - symbol:ATRN "Uncharacterized protein" ... 215 2.7e-14 1
WB|WBGene00006432 - symbol:tag-53 species:6239 "Caenorhab... 164 4.3e-14 3
ZFIN|ZDB-GENE-030131-8092 - symbol:atrnl1b "attractin-lik... 185 1.5e-13 2
ZFIN|ZDB-GENE-081028-60 - symbol:atrnl1a "attractin-like ... 201 1.2e-12 1
FB|FBgn0259896 - symbol:nimC1 "nimrod C1" species:7227 "D... 192 1.6e-12 2
FB|FBgn0028939 - symbol:nimC2 "nimrod C2" species:7227 "D... 187 1.7e-11 1
FB|FBgn0243514 - symbol:eater "eater" species:7227 "Droso... 182 1.1e-10 1
ZFIN|ZDB-GENE-041014-220 - symbol:si:ch211-221n20.8 "si:c... 159 3.8e-10 2
FB|FBgn0039528 - symbol:dsd "distracted" species:7227 "Dr... 133 1.3e-09 2
FB|FBgn0003390 - symbol:shf "shifted" species:7227 "Droso... 148 2.0e-09 2
UNIPROTKB|F1NJR4 - symbol:FBN1 "Uncharacterized protein" ... 164 5.8e-09 1
UNIPROTKB|F1NJ23 - symbol:LAMB1 "Laminin subunit beta-1" ... 169 5.8e-09 1
UNIPROTKB|F1NJR3 - symbol:FBN1 "Uncharacterized protein" ... 164 6.4e-09 1
ZFIN|ZDB-GENE-021226-1 - symbol:lamb1a "laminin, beta 1a"... 168 7.5e-09 1
UNIPROTKB|E2R4J1 - symbol:LAMB2 "Uncharacterized protein"... 168 7.6e-09 1
UNIPROTKB|F1MF28 - symbol:NTN5 "Uncharacterized protein" ... 160 9.9e-09 1
UNIPROTKB|F1SPT5 - symbol:LAMB2 "Uncharacterized protein"... 165 1.5e-08 1
RGD|628777 - symbol:Ush2a "Usher syndrome 2A (autosomal r... 163 2.2e-08 1
UNIPROTKB|D4AA94 - symbol:Megf6 "Multiple epidermal growt... 137 2.7e-08 2
UNIPROTKB|I3L9D5 - symbol:NOTCH3 "Uncharacterized protein... 161 2.7e-08 1
UNIPROTKB|E1BDK6 - symbol:LAMB2 "Uncharacterized protein"... 163 2.7e-08 1
UNIPROTKB|A6PVP2 - symbol:PEAR1 "Platelet endothelial agg... 124 3.0e-08 2
FB|FBgn0261451 - symbol:trol "terribly reduced optic lobe... 130 3.6e-08 3
UNIPROTKB|F1NMJ0 - symbol:NELL1 "Uncharacterized protein"... 158 3.6e-08 1
UNIPROTKB|F1S0X0 - symbol:LAMC3 "Uncharacterized protein"... 161 3.9e-08 1
ZFIN|ZDB-GENE-050310-2 - symbol:ntn2 "netrin 2" species:7... 155 5.0e-08 1
ZFIN|ZDB-GENE-060503-252 - symbol:megf11 "multiple EGF-li... 158 5.4e-08 1
UNIPROTKB|F1NK85 - symbol:NTN1 "Netrin-1" species:9031 "G... 150 5.7e-08 1
UNIPROTKB|F1NEW2 - symbol:NTN1 "Netrin-1" species:9031 "G... 150 6.0e-08 1
ZFIN|ZDB-GENE-980526-104 - symbol:tnc "tenascin C" specie... 151 6.2e-08 2
RGD|1305653 - symbol:Pear1 "platelet endothelial aggregat... 157 6.4e-08 1
RGD|620999 - symbol:Nell2 "NEL-like 2 (chicken)" species:... 155 7.8e-08 1
UNIPROTKB|F1NII7 - symbol:FBN1 "Uncharacterized protein" ... 160 9.5e-08 1
UNIPROTKB|F1NJQ9 - symbol:FBN1 "Uncharacterized protein" ... 160 9.6e-08 1
UNIPROTKB|D4A284 - symbol:Nell1 "Protein kinase C-binding... 149 9.8e-08 1
UNIPROTKB|Q561K2 - symbol:Nell2 "Protein kinase C-binding... 154 1.0e-07 1
UNIPROTKB|Q5VY43 - symbol:PEAR1 "Platelet endothelial agg... 160 1.0e-07 2
UNIPROTKB|Q90922 - symbol:NTN1 "Netrin-1" species:9031 "G... 152 1.1e-07 1
UNIPROTKB|E1BWU4 - symbol:E1BWU4 "Uncharacterized protein... 137 1.2e-07 2
UNIPROTKB|Q225E5 - symbol:TTHERM_02290890 "Putative uncha... 147 1.3e-07 1
MGI|MGI:1920432 - symbol:Pear1 "platelet endothelial aggr... 154 1.4e-07 1
UNIPROTKB|Q2HXW4 - symbol:NTN1 "Netrin-1" species:9823 "S... 151 1.4e-07 1
ZFIN|ZDB-GENE-990415-168 - symbol:ntn1b "netrin 1b" speci... 151 1.4e-07 1
UNIPROTKB|F1N0C7 - symbol:NTN1 "Uncharacterized protein" ... 151 1.4e-07 1
UNIPROTKB|F1PSP7 - symbol:NTN1 "Uncharacterized protein" ... 151 1.4e-07 1
UNIPROTKB|O95631 - symbol:NTN1 "Netrin-1" species:9606 "H... 151 1.4e-07 1
MGI|MGI:105088 - symbol:Ntn1 "netrin 1" species:10090 "Mu... 151 1.4e-07 1
RGD|619809 - symbol:Ntn1 "netrin 1" species:10116 "Rattus... 151 1.4e-07 1
UNIPROTKB|F1LPC8 - symbol:Ntn1 "Netrin-1" species:10116 "... 151 1.4e-07 1
UNIPROTKB|A8XMW6 - symbol:ced-1 "Cell death abnormality p... 154 1.5e-07 1
UNIPROTKB|Q9Y2I2 - symbol:NTNG1 "Netrin-G1" species:9606 ... 136 1.6e-07 2
ZFIN|ZDB-GENE-021226-2 - symbol:lamb4 "laminin, beta 4" s... 156 1.6e-07 1
MGI|MGI:1934028 - symbol:Ntng1 "netrin G1" species:10090 ... 135 1.6e-07 2
UNIPROTKB|Q90923 - symbol:NTN3 "Netrin-3" species:9031 "G... 150 1.7e-07 1
RGD|621188 - symbol:Megf6 "multiple EGF-like-domains 6" s... 137 1.8e-07 3
UNIPROTKB|O88281 - symbol:Megf6 "Multiple epidermal growt... 137 1.8e-07 3
UNIPROTKB|Q9H1U4 - symbol:MEGF9 "Multiple epidermal growt... 150 1.8e-07 1
UNIPROTKB|F1LPI5 - symbol:Lamb3 "Protein Lamb3" species:1... 153 2.1e-07 1
ZFIN|ZDB-GENE-060118-1 - symbol:lama1 "laminin, alpha 1" ... 157 2.2e-07 1
UNIPROTKB|A6QP76 - symbol:PEAR1 "Uncharacterized protein"... 152 2.3e-07 1
UNIPROTKB|F1MPK6 - symbol:TNXB "Uncharacterized protein" ... 136 2.3e-07 2
ZFIN|ZDB-GENE-990415-169 - symbol:ntn1a "netrin 1a" speci... 149 2.4e-07 1
UNIPROTKB|F5H6I3 - symbol:NELL1 "Protein kinase C-binding... 150 2.5e-07 1
UNIPROTKB|H0YDQ9 - symbol:ATRNL1 "Attractin-like protein ... 138 2.6e-07 1
MGI|MGI:1341292 - symbol:Ush2a "Usher syndrome 2A (autoso... 171 2.6e-07 2
FB|FBgn0261514 - symbol:nimA "nimrod A" species:7227 "Dro... 148 2.6e-07 1
UNIPROTKB|P55268 - symbol:LAMB2 "Laminin subunit beta-2" ... 154 2.6e-07 1
UNIPROTKB|E1C3A6 - symbol:FBN2 "Uncharacterized protein" ... 156 2.7e-07 1
UNIPROTKB|Q92832 - symbol:NELL1 "Protein kinase C-binding... 150 2.8e-07 1
MGI|MGI:2443902 - symbol:Nell1 "NEL-like 1" species:10090... 150 2.8e-07 1
UNIPROTKB|J3KNC5 - symbol:NELL1 "Protein kinase C-binding... 150 2.9e-07 1
UNIPROTKB|Q04721 - symbol:NOTCH2 "Neurogenic locus notch ... 146 2.9e-07 2
RGD|1309399 - symbol:Lamc3 "laminin gamma 3" species:1011... 153 2.9e-07 1
FB|FBgn0028543 - symbol:nimB2 "nimrod B2" species:7227 "D... 145 3.6e-07 1
UNIPROTKB|F1RIQ1 - symbol:NTN5 "Uncharacterized protein" ... 147 3.7e-07 2
ZFIN|ZDB-GENE-000329-5 - symbol:notch3 "notch homolog 3" ... 154 3.8e-07 1
WARNING: Descriptions of 471 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0031981 [details] [associations]
symbol:CG7466 species:7227 "Drosophila melanogaster"
[GO:0016020 "membrane" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002165 InterPro:IPR015915 InterPro:IPR018097
Pfam:PF01437 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0016021
EMBL:AE014134 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 InterPro:IPR009030 SUPFAM:SSF57184
HSSP:P35555 Pfam:PF12661 InterPro:IPR011043 SUPFAM:SSF50965
OMA:GHSMVFH FlyBase:FBgn0031981 RefSeq:NP_609180.2 UniGene:Dm.2153
ProteinModelPortal:Q9VLT6 SMR:Q9VLT6 MINT:MINT-1329221
EnsemblMetazoa:FBtr0079541 GeneID:34099 KEGG:dme:Dmel_CG7466
UCSC:CG7466-RA InParanoid:Q9VLT6 PhylomeDB:Q9VLT6 GenomeRNAi:34099
NextBio:786863 ArrayExpress:Q9VLT6 Bgee:Q9VLT6 Uniprot:Q9VLT6
Length = 2898
Score = 990 (353.6 bits), Expect = 4.7e-100, Sum P(2) = 4.7e-100
Identities = 168/336 (50%), Positives = 218/336 (64%)
Query: 39 SCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQ 98
SCPL C +C CL+ + + EC+WS+MLN C++PS + L CAGGVCGLVL +
Sbjct: 2089 SCPLPCHTYENCSLCLSQTPTQDH-QECKWSTMLNLCLTPSSQPLLCAGGVCGLVLEASE 2147
Query: 99 APQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTXXXXXXXXXXXXXXTCDILF 158
+CP C YTQCS+CL HAHCGWCA R+ G G+CT TCD+++
Sbjct: 2148 LQRCPEPCHVYTQCSSCLEHAHCGWCA--REGFNGDGICTEGALEHKQEHPSGSTCDLIY 2205
Query: 159 YQTYPDQVIEVNNNDSFSWNYVKCPPENECLNDHHTCDPQSEQCVDL--ADGFECVCGRG 216
D ++ + D SW+YV+CP ENEC+N HH CD SEQC+DL A G++CVC +G
Sbjct: 2206 ASWRNDS--QLTHADVVSWHYVQCPAENECINGHHNCDTVSEQCIDLDTAVGYKCVCAQG 2263
Query: 217 YNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDV 276
Y EE G C+PVCSQGCVRG C PD+CQCDFGYVG NCSIQC CNGH++C +LD+
Sbjct: 2264 YR--EEQGACLPVCSQGCVRGNCVSPDQCQCDFGYVGANCSIQCLCNGHSNCESSSRLDI 2321
Query: 277 CLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGG 336
CL+CHN+T G QC+KC+PL+VG+PR+ C PC +YC+GH+ +C+ F+
Sbjct: 2322 CLKCHNNTMGEQCEKCQPLFVGNPREGHACQPCLDYCHGHSDVCVAYDADPAVFNMTR-- 2379
Query: 337 TSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCVEG 372
SEL L EGP A C+ CGNHT G +C+ C+ G
Sbjct: 2380 -SELERILQEGPAYNATCLRCGNHTAGDRCDSCLTG 2414
Score = 314 (115.6 bits), Expect = 2.9e-26, P = 2.9e-26
Identities = 87/313 (27%), Positives = 131/313 (41%)
Query: 29 RTNIKLKTGSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPS-YEALY--- 84
+TN ++ CP C +R CQ+CL GE G C W +C S S Y + Y
Sbjct: 1037 KTNSSVRAVEHCPRSCRERHGCQECL----GERG--RCVWCEASAQCFSFSVYTSEYQFG 1090
Query: 85 -CAGGVCGLV------LGPHQAPQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVC 137
C V +V + H+ Q P QC +C +H +C C T G C
Sbjct: 1091 MCREWVDQVVSRQTQEIADHKPQQTPHFLQQ--QCKSCEQHRNCSSCL----RTLSCGWC 1144
Query: 138 TXXXXXXXXXXXXXXTCDILFYQTYPDQVIEVNNNDSFSWNYVKCPPENECLNDHHTCDP 197
D + + +++ W Y +CP +EC H C
Sbjct: 1145 FDRDNPIEGICMQG---DFSYSAGNCSLALNSSSHHDAEWAYAQCPDVDECGLGLHDCHK 1201
Query: 198 QSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCS-EPD-KCQCDFGYVGVN 255
+++ C + + C C RGY + CV C + C G CS PD C+C G+ G +
Sbjct: 1202 EAK-CTNTQGSYNCHCRRGYI-GDGKFSCVRTCYELCQNGNCSGPPDYTCRCALGWTGAD 1259
Query: 256 CSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNG 315
C + C CN H+ C ++L C +C + ++G +C++C G+ C+PC CNG
Sbjct: 1260 CGLSCGCNNHSTCN--ERLGKCDQCQDWSEGEKCERCRQGSYGNATAPHGCLPCE--CNG 1315
Query: 316 H----TGLCINAS 324
H G+C N S
Sbjct: 1316 HGNQDLGVC-NVS 1327
Score = 132 (51.5 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 57/209 (27%), Positives = 75/209 (35%)
Query: 177 WNYVKCPPENECL-NDHHTCDPQSE-----QCVDLADGFECV-CGRGY-NKSEEGGECVP 228
+ YV +CL N H C+ S +C + G +C C + EG C P
Sbjct: 2294 FGYVGANCSIQCLCNGHSNCESSSRLDICLKCHNNTMGEQCEKCQPLFVGNPREGHACQP 2353
Query: 229 VCSQGCV--RGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKG 286
C C VC D F Q GP CLRC NHT G
Sbjct: 2354 -CLDYCHGHSDVCVAYDADPAVFNMTRSELERILQ-------EGPAYNATCLRCGNHTAG 2405
Query: 287 PQCDKCEPLYVGDPRD-NGECVPCSEYCNGHTGLC--INASLASLPFSPES------GGT 337
+CD C Y D + EC PC C+GH +C + + + ES GG
Sbjct: 2406 DRCDSCLTGYFRGSEDLHKECRPCQ--CHGHGNICDPVTGEKCNCANNTESDATCTAGGG 2463
Query: 338 SELAAFLDEGPTTRARCMHCGNHTTGPKC 366
A ++ R + GN T G +C
Sbjct: 2464 KNSAQLCWMVQCSKCRDSYAGNPTDGHQC 2492
Score = 126 (49.4 bits), Expect = 7.7e-07, Sum P(3) = 7.7e-07
Identities = 38/111 (34%), Positives = 50/111 (45%)
Query: 208 GFECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQ-CDFGYVGVNCS-----IQCQ 261
G +C G N E + C Q C SE +KC+ C G G N + + C+
Sbjct: 1257 GADCGLSCGCNNHSTCNERLGKCDQ-CQDW--SEGEKCERCRQGSYG-NATAPHGCLPCE 1312
Query: 262 CNGHADCAGPDKLDVC------LRCHNHTKGPQCDKCEPLYVGDPRDNGEC 306
CNGH G L VC C ++T+G C+ C P Y GDPR G+C
Sbjct: 1313 CNGH----GNQDLGVCNVSNGECYCKDNTQGLNCELCAPGYYGDPRGGGKC 1359
Score = 81 (33.6 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 23/85 (27%), Positives = 31/85 (36%)
Query: 43 RCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSY-EALYCAGGVCGLVLGPH---Q 98
+C Q ++C CLT + C W + N C S E C + Q
Sbjct: 949 KCTQYSNCLHCLTDAS-------CAWCPLTNICHLRSVNETEVCKMETLDTFHWSYLISQ 1001
Query: 99 APQCPRSCSAYTQCSTCLRHAHCGW 123
QC +C+ Y C C R C W
Sbjct: 1002 PSQCS-NCTNYVSCEACARSGECEW 1025
Score = 69 (29.3 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 100 PQCPRSCSAYTQCSTCLRHAHCGWCAL 126
P C+ Y+ C CL A C WC L
Sbjct: 944 PYYSGKCTQYSNCLHCLTDASCAWCPL 970
Score = 63 (27.2 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 19/60 (31%), Positives = 27/60 (45%)
Query: 66 CRWSSMLNECISPSYEALYC-AGGVC-GLVLGPH-----QAPQCPRSCSAYTQCSTCLRH 118
CR S C+S + E +C A C G +G + Q +CP C + C +CL H
Sbjct: 659 CRLHSSHTACLS-NPECGWCSADSSCYGRTIGANCTTNLQTTRCPGICPSLGDCHSCLVH 717
Score = 62 (26.9 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 105 SCSAYTQCSTCLRHAHCGWCALQRDTTGG-MGV-CT 138
SC ++ + CL + CGWC+ G +G CT
Sbjct: 658 SCRLHSSHTACLSNPECGWCSADSSCYGRTIGANCT 693
Score = 54 (24.1 bits), Expect = 4.7e-100, Sum P(2) = 4.7e-100
Identities = 21/61 (34%), Positives = 28/61 (45%)
Query: 21 RTVKTDANRTNIKLKTGSSCPLRCDQRTDCQDCLT--SSGGEGGWHECRWSSM----LNE 74
RT+ AN T L+T + CP C DC CL S G+ ++ +S LNE
Sbjct: 686 RTI--GANCTT-NLQT-TRCPGICPSLGDCHSCLVHGSQWGKSSGNKAAFSVASKLGLNE 741
Query: 75 C 75
C
Sbjct: 742 C 742
Score = 49 (22.3 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 104 RSCSAYTQCSTCLR----HAH----CGWCALQRDTTGGMGVC 137
R+CS++ C CL H C WC D G G C
Sbjct: 1979 RNCSSFATCGACLAAWPTHQEVAPVCHWC----DDCGIRGRC 2016
Score = 49 (22.3 bits), Expect = 0.00015, Sum P(2) = 0.00014
Identities = 24/117 (20%), Positives = 40/117 (34%)
Query: 21 RTVKTDANRTNIKLKTGSSCPLRCDQRTDCQDCLTSSGGEGGW--HE-----CRWSS--- 70
RT + N T + + G++C +C T W H+ C W
Sbjct: 1953 RTPCANHNGTLV-VNNGAACDDDWMASRNCSSFATCGACLAAWPTHQEVAPVCHWCDDCG 2011
Query: 71 MLNECISPSYE----ALYCAGGVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHCGW 123
+ C+ + + +C + VLG PQC + C +C+ C W
Sbjct: 2012 IRGRCVPAGVDCGRRSAWCNKELSVGVLGLCPLPQCYQ-----LSCESCMLQPQCNW 2063
>RGD|621190 [details] [associations]
symbol:Megf8 "multiple EGF-like-domains 8" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0061371 "determination of heart
left/right asymmetry" evidence=ISO] [GO:0071907 "determination of
digestive tract left/right asymmetry" evidence=ISO] [GO:0016020
"membrane" evidence=ISO] [GO:0060287 "epithelial cilium movement
involved in determination of left/right asymmetry" evidence=ISO]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR002165
InterPro:IPR015915 InterPro:IPR018097 Pfam:PF01437 Pfam:PF07645
PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:621190 GO:GO:0016021 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027 Gene3D:2.60.120.290
InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854
PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 eggNOG:NOG304142 HOGENOM:HOG000113554
HOVERGEN:HBG108128 OrthoDB:EOG4JHCDR EMBL:AABR03001918
EMBL:AABR03001941 EMBL:AABR03004237 EMBL:AB011534 IPI:IPI00766905
UniGene:Rn.21378 ProteinModelPortal:Q9QYP0 IntAct:Q9QYP0
STRING:Q9QYP0 PhosphoSite:Q9QYP0 PRIDE:Q9QYP0
Ensembl:ENSRNOT00000027831 UCSC:RGD:621190 InParanoid:Q9QYP0
Genevestigator:Q9QYP0 Uniprot:Q9QYP0
Length = 2788
Score = 531 (192.0 bits), Expect = 9.5e-64, Sum P(2) = 9.5e-64
Identities = 90/201 (44%), Positives = 124/201 (61%)
Query: 176 SWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCV 235
SW ++ CPPE+EC N HH C+ +++ C D G+EC C GY G C PVC+QGCV
Sbjct: 2113 SWAFLSCPPEDECANGHHDCN-ETQNCHDQPHGYECSCKTGYTMDNVTGVCRPVCAQGCV 2171
Query: 236 RGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPL 295
G C EPD C+C FG+VG NCS +C+CN H++CAG D CL C NHTKG C++C PL
Sbjct: 2172 NGSCVEPDHCRCHFGFVGRNCSTECRCNRHSECAGVGARDHCLLCRNHTKGSHCEQCLPL 2231
Query: 296 YVGDPRDNGECVPCSEYCNGHTGLCINAS-LASLPFSPE--SGGTSELAAFLDEGPTT-R 351
+VG G C PC +C G++ +C++ L PE S E+ A++ EGP+
Sbjct: 2232 FVGSALGGGTCRPCHAFCRGNSHVCVSRKELEMARREPEKYSLDPEEIEAWVAEGPSEDE 2291
Query: 352 ARCMHCGNHTTGPKCEDCVEG 372
A C++C N++ G +CE C+ G
Sbjct: 2292 AVCVNCQNNSYGDRCESCLHG 2312
Score = 257 (95.5 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 73/234 (31%), Positives = 90/234 (38%)
Query: 40 CPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVL-GPHQ 98
CP C +C CL S G +GGW C WSS L +C+SPSY L C G CG +L GP
Sbjct: 2000 CPTPCHLLPNCTSCLASKGADGGWQHCVWSSSLQQCLSPSYLPLRCMAGGCGRLLRGPES 2059
Query: 99 APQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTXXXXXXXXXXXXXXTCDILF 158
C C+ TQC+ CLR HCGWCA GG + F
Sbjct: 2060 ---CSLGCAQATQCALCLRRPHCGWCAWGGQDGGGHCMEGGLSGPRDGLTCGRPGASWAF 2116
Query: 159 YQTYPDQVIEVNNNDSFSWNYVKCPPENECLNDHH--TCDPQSEQCVDLADGFEC--VCG 214
P+ ++D C C + H C ++ +D G C VC
Sbjct: 2117 LSCPPEDECANGHHD--------CNETQNCHDQPHGYECSCKTGYTMDNVTGV-CRPVCA 2167
Query: 215 RG-YNKS-EEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQ-CNGH 265
+G N S E C C G V CS +C GV C C H
Sbjct: 2168 QGCVNGSCVEPDHCR--CHFGFVGRNCSTECRCNRHSECAGVGARDHCLLCRNH 2219
Score = 225 (84.3 bits), Expect = 6.7e-28, Sum P(2) = 6.7e-28
Identities = 57/169 (33%), Positives = 74/169 (43%)
Query: 177 WNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVR 236
W Y +CP +EC C P++ C++ +EC C RGY + + C C + C
Sbjct: 1067 WAYARCPDVDECRLGLARCHPRAT-CLNTPLSYECHCQRGY-QGDGITHCNRTCLEDCGH 1124
Query: 237 GVCS-EPD-KCQCDFGYVG-------------VNCSIQCQCNGHADCA--GPDKLDVCLR 279
GVCS PD C CD G+ CS C CN H+ C GP C
Sbjct: 1125 GVCSGPPDFTCVCDLGWTSDLPPPTPAPGPPAPRCSRDCGCNFHSHCRRRGPG---YCDE 1181
Query: 280 CHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGH----TGLCINAS 324
C + T G C++C P G+ +G C PC CNGH G C N S
Sbjct: 1182 CQDWTWGEHCERCRPGSFGNATGSGGCRPCQ--CNGHGDPRRGHCDNLS 1228
Score = 171 (65.3 bits), Expect = 9.5e-64, Sum P(2) = 9.5e-64
Identities = 37/105 (35%), Positives = 49/105 (46%)
Query: 34 LKTGSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNEC-ISPSYEALYCAGGVCGL 92
LK CP C QR C+DCL +S +C W + C + +Y A Y GG G
Sbjct: 940 LKNPEECPPLCSQRLTCEDCLANSS------QCAWCQSTHTCFLFAAYLARYPHGGCRGW 993
Query: 93 VLGPHQAPQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVC 137
H P+C RSC + C CL+ CGWC + + T +G C
Sbjct: 994 DDSVHSEPRC-RSCHGFLTCHECLQSHECGWCGNEDNPT--LGRC 1035
Score = 133 (51.9 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 36/87 (41%), Positives = 39/87 (44%)
Query: 260 CQCNGHADCA-GP-DKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHT 317
CQCNGH D G D L C +HT+G C C P Y GDPR G C C G
Sbjct: 1211 CQCNGHGDPRRGHCDNLSGLCFCQDHTEGAHCQICSPGYYGDPRAGGSCF---RECGGRA 1267
Query: 318 GLCINAS---LASLPFS---PESGGTS 338
L N S L S F P GGT+
Sbjct: 1268 -LLTNVSSVALGSRRFGGLLPPGGGTA 1293
Score = 98 (39.6 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 27/78 (34%), Positives = 37/78 (47%)
Query: 243 DKCQ-CDFGYVGVN--CSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGD 299
D+C+ C GY ++ C+ +CQCNGHAD C C N+T+ C P D
Sbjct: 2304 DRCESCLHGYFLLDGKCT-KCQCNGHADTCNEQDGTGC-PCQNNTETGVCQGSSP---SD 2358
Query: 300 PRD--NGECVPCSEYCNG 315
RD +C C E +G
Sbjct: 2359 RRDCYKYQCAKCRESFHG 2376
Score = 78 (32.5 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 29/88 (32%), Positives = 36/88 (40%)
Query: 208 GFECVCGRGYNKSEEGGECVPVCSQGCV-RGVCSEPDKCQCDFGYVGVNCSIQ-C--QCN 263
GF G S G C PV Q CV + + C+C G+ G +C + C CN
Sbjct: 1397 GFNASVGSARCGSGGPGSC-PV-PQECVPQDGAAGAGLCRCPQGWAGPHCRMALCPENCN 1454
Query: 264 GHADCAG--PDKLDVCLRCHNHTKGPQC 289
H AG L VC+ C GP C
Sbjct: 1455 AHTG-AGICNQSLGVCI-CAEGFGGPDC 1480
Score = 77 (32.2 bits), Expect = 8.7e-12, Sum P(2) = 8.7e-12
Identities = 35/128 (27%), Positives = 53/128 (41%)
Query: 191 DHHTCDPQSEQCVDLADG---FECVCGRGYNKSEEGGECVPVCSQG--CVRGVCSEPDKC 245
+ ++ DP+ + +A+G E VC N S G C C G + G C+ KC
Sbjct: 2270 EKYSLDPEEIEAW-VAEGPSEDEAVCVNCQNNSY-GDRCES-CLHGYFLLDGKCT---KC 2323
Query: 246 QCDFGYVGVNCSIQ----CQCNGHAD---CAGPDKLDVCLRCHNHTKGPQCDKCEPLYVG 298
QC+ G+ C+ Q C C + + C G D C+ + QC KC + G
Sbjct: 2324 QCN-GHADT-CNEQDGTGCPCQNNTETGVCQGSSPSDR-RDCYKY----QCAKCRESFHG 2376
Query: 299 DPRDNGEC 306
P +C
Sbjct: 2377 SPLGGQQC 2384
Score = 71 (30.1 bits), Expect = 3.1e-54, Sum P(3) = 3.1e-54
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 105 SCSAYTQCSTCLRHAHCGWC 124
+CS+Y+ C CL CGWC
Sbjct: 847 ACSSYSSCLGCLADQGCGWC 866
Score = 64 (27.6 bits), Expect = 1.7e-52, Sum P(2) = 1.7e-52
Identities = 10/19 (52%), Positives = 10/19 (52%)
Query: 106 CSAYTQCSTCLRHAHCGWC 124
CS YT S C R C WC
Sbjct: 562 CSMYTDHSVCSRDPECSWC 580
Score = 63 (27.2 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 29/99 (29%), Positives = 38/99 (38%)
Query: 253 GVNCSI---QCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPC 309
G N S+ +C G C P + C+ C +C + G P + C
Sbjct: 1397 GFNASVGSARCGSGGPGSCPVPQE---CVPQDGAAGAGLC-RCPQGWAG-P--HCRMALC 1449
Query: 310 SEYCNGHTGLCI-NASLASLPFSPESGGTSELAAFLDEG 347
E CN HTG I N SL + E G + A LD G
Sbjct: 1450 PENCNAHTGAGICNQSLG-VCICAEGFGGPDCATKLDGG 1487
Score = 60 (26.2 bits), Expect = 4.6e-52, Sum P(2) = 4.6e-52
Identities = 23/85 (27%), Positives = 27/85 (31%)
Query: 42 LRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYC---AGGVCGLVLGPHQ 98
L C + C CL G C W C A +C G LVL P
Sbjct: 846 LACSSYSSCLGCLADQG-------CGWCLNSATCHLRQGRA-HCEDDGNGESLLVLVP-- 895
Query: 99 APQCPRSCSAYTQCSTCLRHAHCGW 123
CP C + C C + C W
Sbjct: 896 -ALCPL-CEEHRDCHACTQDPFCEW 918
Score = 60 (26.2 bits), Expect = 9.3e-21, Sum P(2) = 9.3e-21
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 270 GPDKLD-VCLRCHNHTKGPQCDKC-EPLYVGDPRD-----NGECVPCSEY----C----N 314
GP + + VC+ C N++ G +C+ C ++ D + NG C+E C N
Sbjct: 2286 GPSEDEAVCVNCQNNSYGDRCESCLHGYFLLDGKCTKCQCNGHADTCNEQDGTGCPCQNN 2345
Query: 315 GHTGLCINAS 324
TG+C +S
Sbjct: 2346 TETGVCQGSS 2355
Score = 58 (25.5 bits), Expect = 7.4e-52, Sum P(2) = 7.4e-52
Identities = 19/61 (31%), Positives = 26/61 (42%)
Query: 59 GEGGWHECRWSSMLNECISPSYEALYCAGGVCGLV---LGPH-QAPQCPRSCSAYTQCST 114
G GG C + EC+ P A G+C GPH + CP +C+A+T
Sbjct: 1408 GSGGPGSC---PVPQECV-PQDGA--AGAGLCRCPQGWAGPHCRMALCPENCNAHTGAGI 1461
Query: 115 C 115
C
Sbjct: 1462 C 1462
Score = 57 (25.1 bits), Expect = 9.1e-53, Sum P(3) = 9.1e-53
Identities = 14/43 (32%), Positives = 17/43 (39%)
Query: 83 LYCAGGVCGLVLGPHQAPQCPRS-CSAYTQCSTCLRHAHCGWC 124
LY +GG G+ LG A P C C + C WC
Sbjct: 1796 LYISGGFGGVALGRLLALTLPPDPCRLLPSPEACNQSGACTWC 1838
Score = 57 (25.1 bits), Expect = 9.5e-52, Sum P(2) = 9.5e-52
Identities = 14/35 (40%), Positives = 15/35 (42%)
Query: 34 LKTGSSCPLRCDQRTDCQDCLTSSGGEGGWHECRW 68
L+ SC L C Q T C CL GW C W
Sbjct: 2054 LRGPESCSLGCAQATQCALCLRRP--HCGW--CAW 2084
Score = 53 (23.7 bits), Expect = 2.5e-51, Sum P(2) = 2.5e-51
Identities = 20/93 (21%), Positives = 28/93 (30%)
Query: 41 PLRCDQRTDCQDCLTS-------SGGEGGWHECRWSSMLNE--CISPSYEALYCAGGVCG 91
P C + C +CL GE C+W + E CI + + C
Sbjct: 1865 PEECRRLRTCSECLARHPRTLQPGDGEASVPRCKWCTNCPEGACIGRNGSCT--SENDCR 1922
Query: 92 LVLGP-HQAPQCPRSCSAYTQCSTCLRHAHCGW 123
+ A C + C C R C W
Sbjct: 1923 INQREVFWAGNCSEAACGAADCEQCTREGKCMW 1955
Score = 51 (23.0 bits), Expect = 3.9e-52, Sum P(3) = 3.9e-52
Identities = 16/44 (36%), Positives = 20/44 (45%)
Query: 95 GPHQAPQCPRSCSAYTQCSTCLRHAHC-----GWCALQRDTTGG 133
GP AP+C R C C H+HC G+C +D T G
Sbjct: 1153 GP-PAPRCSRDCG-------CNFHSHCRRRGPGYCDECQDWTWG 1188
Score = 47 (21.6 bits), Expect = 1.0e-51, Sum P(3) = 1.0e-51
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 100 PQCPRSCSAYTQCSTCL-RH 118
P+ P C CS CL RH
Sbjct: 1862 PRSPEECRRLRTCSECLARH 1881
Score = 45 (20.9 bits), Expect = 1.7e-50, Sum P(2) = 1.7e-50
Identities = 14/45 (31%), Positives = 18/45 (40%)
Query: 102 CPRSCSAYTQCST---CLRHAHCGW----CALQRDTT--GGMGVC 137
CP C + QC + C+ GW C LQ + G G C
Sbjct: 142 CPGGCQNHGQCKSPGVCV--CEPGWGGPDCGLQECSAYCGSHGTC 184
Score = 42 (19.8 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 8/19 (42%), Positives = 9/19 (47%)
Query: 354 CMHCGNHTTGPKCEDCVEG 372
C C + T G CE C G
Sbjct: 1179 CDECQDWTWGEHCERCRPG 1197
Score = 38 (18.4 bits), Expect = 3.1e-54, Sum P(3) = 3.1e-54
Identities = 14/43 (32%), Positives = 16/43 (37%)
Query: 48 TDCQDCLTSSGGEG---GWHECRWSSMLNECISPSYEALYCAG 87
+DCQ CL S G W + NE P E C G
Sbjct: 610 SDCQACLAFSSPTAPPRGPGTLGWC-VHNESCLPRPEQARCRG 651
>UNIPROTKB|F1RGK2 [details] [associations]
symbol:MEGF8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002165 InterPro:IPR015915
InterPro:IPR018097 Pfam:PF01437 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0016021 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 OMA:GHSMVFH EMBL:FP102452
Ensembl:ENSSSCT00000003355 Uniprot:F1RGK2
Length = 2789
Score = 531 (192.0 bits), Expect = 1.5e-63, Sum P(2) = 1.5e-63
Identities = 90/201 (44%), Positives = 124/201 (61%)
Query: 176 SWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCV 235
SW ++ CPPE+EC N HH C+ +++ C D G+EC C GY G C PVC+QGCV
Sbjct: 2114 SWAFLSCPPEDECANGHHDCN-ETQNCHDRPHGYECSCKTGYTMDNVTGLCRPVCAQGCV 2172
Query: 236 RGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPL 295
G C EPD C+C FG+VG NCS +C+CN H++CAG D CL CHNHTKG C++C PL
Sbjct: 2173 NGSCVEPDHCRCHFGFVGRNCSTECRCNRHSECAGVGARDHCLLCHNHTKGSHCEQCLPL 2232
Query: 296 YVGDPRDNGECVPCSEYCNGHTGLCINAS-LASLPFSPE--SGGTSELAAFLDEGPTT-R 351
+VG G C PC +C G++ +C++ L PE S ++ ++ EGP+
Sbjct: 2233 FVGSAVGGGTCRPCHAFCRGNSHVCLSRKELEMARREPEKYSLDPDKIENWVSEGPSEDE 2292
Query: 352 ARCMHCGNHTTGPKCEDCVEG 372
A C++C N++ G KCE C+ G
Sbjct: 2293 AVCVNCQNNSYGDKCESCLHG 2313
Score = 257 (95.5 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 73/234 (31%), Positives = 91/234 (38%)
Query: 40 CPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVL-GPHQ 98
CP C +C CL S G +GGW C WSS L +C+SPSY L C G CG +L GP
Sbjct: 2001 CPTPCHLLPNCTSCLDSKGADGGWQHCVWSSSLQQCLSPSYLPLRCMAGGCGRLLRGPES 2060
Query: 99 APQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTXXXXXXXXXXXXXXTCDILF 158
C C+ TQC+ CLR HCGWCA GG + F
Sbjct: 2061 ---CSLGCAQATQCALCLRRPHCGWCAWGSQDGGGHCLEGGLSGPRDGLTCGRPGASWAF 2117
Query: 159 YQTYPDQVIEVNNNDSFSWNYVKCPPENECLNDHH--TCDPQSEQCVDLADGFEC--VCG 214
P+ ++D C C + H C ++ +D G C VC
Sbjct: 2118 LSCPPEDECANGHHD--------CNETQNCHDRPHGYECSCKTGYTMDNVTGL-CRPVCA 2168
Query: 215 RG-YNKS-EEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQ-CNGH 265
+G N S E C C G V CS +C GV C C+ H
Sbjct: 2169 QGCVNGSCVEPDHCR--CHFGFVGRNCSTECRCNRHSECAGVGARDHCLLCHNH 2220
Score = 213 (80.0 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 56/169 (33%), Positives = 73/169 (43%)
Query: 177 WNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVR 236
W Y +CP +EC C ++ C++ +EC C RGY + + C C + C
Sbjct: 1067 WAYARCPDVDECRLGLARCHLRAT-CLNTPLSYECHCQRGY-QGDGITYCNRTCLEDCGH 1124
Query: 237 GVCS-EPD-KCQCDFGYVG-------------VNCSIQCQCNGHADCA--GPDKLDVCLR 279
GVCS PD C CD G+ CS C CN H+ C GP C
Sbjct: 1125 GVCSGPPDFTCVCDLGWTSDLPLPTPAPGPPAPRCSRDCGCNFHSHCRKRGPG---FCDE 1181
Query: 280 CHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGH----TGLCINAS 324
C + T G C++C P G+ +G C PC CNGH G C N S
Sbjct: 1182 CQDWTWGEHCERCRPGSFGNATGSGGCRPCQ--CNGHGDPRRGHCDNLS 1228
Score = 169 (64.5 bits), Expect = 1.5e-63, Sum P(2) = 1.5e-63
Identities = 37/105 (35%), Positives = 48/105 (45%)
Query: 34 LKTGSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECIS-PSYEALYCAGGVCGL 92
LK+ CP C QR C DCL +S +C W + C +Y A Y GG G
Sbjct: 940 LKSPEECPPLCSQRLTCDDCLANSS------QCAWCQSTHTCFMFAAYLARYPHGGCRGW 993
Query: 93 VLGPHQAPQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVC 137
H P+C RSC + C CL+ CGWC + + T +G C
Sbjct: 994 DDSVHSEPRC-RSCDRFLTCHECLQSHECGWCGNEDNPT--LGRC 1035
Score = 130 (50.8 bits), Expect = 4.6e-17, Sum P(2) = 4.6e-17
Identities = 33/79 (41%), Positives = 36/79 (45%)
Query: 260 CQCNGHADCA-GP-DKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHT 317
CQCNGH D G D L C +HT+G C C P Y GDPR G C C G
Sbjct: 1211 CQCNGHGDPRRGHCDNLSGLCFCQDHTEGAHCQLCSPGYYGDPRAGGSCF---RECGGRA 1267
Query: 318 GLCINASLASLPFSPESGG 336
L N S +L S GG
Sbjct: 1268 -LLTNVSSVALG-SRRVGG 1284
Score = 103 (41.3 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 35/101 (34%), Positives = 43/101 (42%)
Query: 220 SEEGGECVPVCSQGCVRGVCSEPDKCQ-CDFGYVGVN--CSIQCQCNGHADCAGPDKLDV 276
SE E VC C S DKC+ C GY + C+ +CQCNGHAD
Sbjct: 2285 SEGPSEDEAVCVN-CQNN--SYGDKCESCLHGYFLLEGKCT-KCQCNGHADTCNEQDGTG 2340
Query: 277 CLRCHNHTKGPQCDKCEPLYVGDPRD--NGECVPCSEYCNG 315
C C N+T+ C P D RD +C C E +G
Sbjct: 2341 C-PCQNNTETGTCQGSSP---SDRRDCYKYQCAKCRESFHG 2377
Score = 82 (33.9 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 32/89 (35%), Positives = 37/89 (41%)
Query: 208 GFECVCGRGYNKSEEGGECVPVCSQGCVR--GVCSEPDKCQCDFGYVGVNCSIQ-C--QC 262
GF G S G C PV Q CV GV CQC G+ G +C + C C
Sbjct: 1397 GFNASVGSARCGSGGPGSC-PV-PQECVPQDGVTGA-GLCQCPQGWAGPHCRMALCPENC 1453
Query: 263 NGHADCAGP--DKLDVCLRCHNHTKGPQC 289
N H + AG L VC+ C GP C
Sbjct: 1454 NAH-NGAGTCNQSLGVCI-CAEGFGGPDC 1480
Score = 78 (32.5 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 31/106 (29%), Positives = 43/106 (40%)
Query: 210 ECVCGRGYNKSEEGGECVPVCSQG--CVRGVCSEPDKCQCDFGYVGVNCSIQ----CQCN 263
E VC N S G +C C G + G C+ KCQC+ G+ C+ Q C C
Sbjct: 2292 EAVCVNCQNNSY-GDKCES-CLHGYFLLEGKCT---KCQCN-GHADT-CNEQDGTGCPCQ 2344
Query: 264 GHAD---CAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGEC 306
+ + C G D C+ + QC KC + G P +C
Sbjct: 2345 NNTETGTCQGSSPSDR-RDCYKY----QCAKCRESFHGSPLGGQQC 2385
Score = 69 (29.3 bits), Expect = 5.2e-53, Sum P(2) = 5.2e-53
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 100 PQCPRSCSAYTQCSTCLRHAHCGWC 124
P +C++Y+ C CL CGWC
Sbjct: 842 PYRSSACASYSSCLGCLADQGCGWC 866
Score = 64 (27.6 bits), Expect = 1.7e-52, Sum P(2) = 1.7e-52
Identities = 10/19 (52%), Positives = 10/19 (52%)
Query: 106 CSAYTQCSTCLRHAHCGWC 124
CS YT S C R C WC
Sbjct: 562 CSMYTDHSVCSRDPECSWC 580
Score = 61 (26.5 bits), Expect = 3.6e-52, Sum P(2) = 3.6e-52
Identities = 15/37 (40%), Positives = 16/37 (43%)
Query: 34 LKTGSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSS 70
L+ SC L C Q T C CL GW C W S
Sbjct: 2055 LRGPESCSLGCAQATQCALCLRRP--HCGW--CAWGS 2087
Score = 59 (25.8 bits), Expect = 5.8e-52, Sum P(2) = 5.8e-52
Identities = 15/43 (34%), Positives = 18/43 (41%)
Query: 83 LYCAGGVCGLVLGPHQAPQCPR-SCSAYTQCSTCLRHAHCGWC 124
LY +GG G+ LG A P SC C + C WC
Sbjct: 1797 LYISGGFGGVALGRLLALTLPPDSCRLLPSPEACNQSGACIWC 1839
Score = 58 (25.5 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 28/99 (28%), Positives = 37/99 (37%)
Query: 253 GVNCSI---QCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPC 309
G N S+ +C G C P + C+ T C +C + G P + C
Sbjct: 1397 GFNASVGSARCGSGGPGSCPVPQE---CVPQDGVTGAGLC-QCPQGWAG-P--HCRMALC 1449
Query: 310 SEYCNGHTGL-CINASLASLPFSPESGGTSELAAFLDEG 347
E CN H G N SL + E G + A LD G
Sbjct: 1450 PENCNAHNGAGTCNQSLG-VCICAEGFGGPDCATKLDGG 1487
Score = 57 (25.1 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 20/69 (28%), Positives = 29/69 (42%)
Query: 258 IQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDP--RDNGECVPCSEYCNG 315
+ CQ N + D K + CL + +G +C KC+ D +G PC N
Sbjct: 2296 VNCQNNSYGD-----KCESCLHGYFLLEG-KCTKCQCNGHADTCNEQDGTGCPCQN--NT 2347
Query: 316 HTGLCINAS 324
TG C +S
Sbjct: 2348 ETGTCQGSS 2356
Score = 55 (24.4 bits), Expect = 1.5e-51, Sum P(2) = 1.5e-51
Identities = 18/55 (32%), Positives = 20/55 (36%)
Query: 66 CRWSSMLNECISPSY-EALYCAGGVCGLVLGPHQAPQCPRSCSAYTQCSTCL-RH 118
C W C+S L C G C + PH P C CS CL RH
Sbjct: 1836 CIWCH--GACLSGDQAHRLGCGGSPCSPM--PHS----PEECRRLRTCSECLARH 1882
Score = 55 (24.4 bits), Expect = 1.5e-51, Sum P(2) = 1.5e-51
Identities = 19/61 (31%), Positives = 28/61 (45%)
Query: 59 GEGGWHECRWSSMLNECISPSYEALYCAGGVCGLV---LGPH-QAPQCPRSCSAYTQCST 114
G GG C + EC+ P + + AG +C GPH + CP +C+A+ T
Sbjct: 1408 GSGGPGSC---PVPQECV-PQ-DGVTGAG-LCQCPQGWAGPHCRMALCPENCNAHNGAGT 1461
Query: 115 C 115
C
Sbjct: 1462 C 1462
Score = 51 (23.0 bits), Expect = 4.1e-51, Sum P(2) = 4.1e-51
Identities = 32/110 (29%), Positives = 41/110 (37%)
Query: 43 RCDQRTDC------QDCLTSSGGEG-GWHECRWSSMLNEC----IS--PSYEALYCAGGV 89
RC R C +C G +G G C + L +C S P + + G
Sbjct: 1084 RCHLRATCLNTPLSYECHCQRGYQGDGITYCN-RTCLEDCGHGVCSGPPDFTCVCDLGWT 1142
Query: 90 CGLVLG-PHQAPQCPRSCSAYTQCSTCLRHAHC-----GWCALQRDTTGG 133
L L P P PR CS C C H+HC G+C +D T G
Sbjct: 1143 SDLPLPTPAPGPPAPR-CSR--DCG-CNFHSHCRKRGPGFCDECQDWTWG 1188
Score = 50 (22.7 bits), Expect = 5.2e-51, Sum P(2) = 5.2e-51
Identities = 20/93 (21%), Positives = 28/93 (30%)
Query: 41 PLRCDQRTDCQDCLTS-------SGGEGGWHECRWSSMLNE--CISPSYEALYCAGGVCG 91
P C + C +CL GE C+W + E CI + + C
Sbjct: 1866 PEECRRLRTCSECLARHPRTLQPGDGEAPAPRCKWCTNCPEGACIGRNGSCT--SENDCR 1923
Query: 92 LVLGP-HQAPQCPRSCSAYTQCSTCLRHAHCGW 123
+ A C + C C R C W
Sbjct: 1924 INQREVFWAGNCSEAVCGAADCEQCTREGKCMW 1956
Score = 45 (20.9 bits), Expect = 1.7e-50, Sum P(2) = 1.7e-50
Identities = 14/45 (31%), Positives = 18/45 (40%)
Query: 102 CPRSCSAYTQCS---TCLRHAHCGW----CALQRDTT--GGMGVC 137
CP C ++ QC C+ GW C+LQ G G C
Sbjct: 142 CPGGCRSHGQCQPPGVCV--CEPGWGGPDCSLQECQAYCGSHGTC 184
Score = 44 (20.5 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 27/108 (25%), Positives = 36/108 (33%)
Query: 280 CHNHTKGPQCDKCEPLYVGDPRD--NGECVP-CSE-YCNG---HTGLCINASLASLPFSP 332
C N +C C+ Y GD N C+ C C+G T +C + LP
Sbjct: 1091 CLNTPLSYECH-CQRGYQGDGITYCNRTCLEDCGHGVCSGPPDFTCVCDLGWTSDLPLPT 1149
Query: 333 ESGGTSELAAFLDEGPTTRARCM--------HCGNHTTGPKCEDCVEG 372
+ G D G + C C + T G CE C G
Sbjct: 1150 PAPGPPAPRCSRDCGCNFHSHCRKRGPGFCDECQDWTWGEHCERCRPG 1197
>UNIPROTKB|Q7Z7M0 [details] [associations]
symbol:MEGF8 "Multiple epidermal growth factor-like domains
protein 8" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=NAS] [GO:0005198 "structural molecule activity"
evidence=NAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002165 InterPro:IPR015915 InterPro:IPR018097
Pfam:PF01437 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0016021
GO:GO:0005198 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
InterPro:IPR011043 SUPFAM:SSF50965 EMBL:AB011541 EMBL:AC011497
EMBL:AC024078 EMBL:BC153880 EMBL:AY280362 IPI:IPI00027310
IPI:IPI00607580 PIR:T00209 RefSeq:NP_001258867.1 RefSeq:NP_001401.2
UniGene:Hs.132483 ProteinModelPortal:Q7Z7M0 SMR:Q7Z7M0
IntAct:Q7Z7M0 MINT:MINT-2808456 STRING:Q7Z7M0 PhosphoSite:Q7Z7M0
DMDM:218511690 PaxDb:Q7Z7M0 PRIDE:Q7Z7M0 Ensembl:ENST00000251268
Ensembl:ENST00000334370 GeneID:1954 KEGG:hsa:1954 UCSC:uc002otl.4
UCSC:uc002otm.4 CTD:1954 GeneCards:GC19P042829 HGNC:HGNC:3233
HPA:HPA049248 MIM:604267 neXtProt:NX_Q7Z7M0 PharmGKB:PA27666
eggNOG:NOG304142 HOGENOM:HOG000113554 HOVERGEN:HBG108128
OMA:GHSMVFH ChiTaRS:MEGF8 GenomeRNAi:1954 NextBio:7919
ArrayExpress:Q7Z7M0 Bgee:Q7Z7M0 CleanEx:HS_MEGF8
Genevestigator:Q7Z7M0 GermOnline:ENSG00000105429 Uniprot:Q7Z7M0
Length = 2845
Score = 527 (190.6 bits), Expect = 1.6e-63, Sum P(2) = 1.6e-63
Identities = 90/201 (44%), Positives = 124/201 (61%)
Query: 176 SWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCV 235
SW ++ CPPE+EC N HH C+ +++ C D G+EC C GY G C PVC+QGCV
Sbjct: 2170 SWAFLSCPPEDECANGHHDCN-ETQNCHDQPHGYECSCKTGYTMDNMTGLCRPVCAQGCV 2228
Query: 236 RGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPL 295
G C EPD C+C FG+VG NCS +C+CN H++CAG D CL C NHTKG C++C PL
Sbjct: 2229 NGSCVEPDHCRCHFGFVGRNCSTECRCNRHSECAGVGARDHCLLCRNHTKGSHCEQCLPL 2288
Query: 296 YVGDPRDNGECVPCSEYCNGHTGLCINAS-LASLPFSPE--SGGTSELAAFLDEGPTT-R 351
+VG G C PC +C G++ +CI+ L P+ S E+ ++ EGP+
Sbjct: 2289 FVGSAVGGGTCRPCHAFCRGNSHICISRKELQMSKGEPKKYSLDPEEIENWVTEGPSEDE 2348
Query: 352 ARCMHCGNHTTGPKCEDCVEG 372
A C++C N++ G KCE C++G
Sbjct: 2349 AVCVNCQNNSYGEKCESCLQG 2369
Score = 257 (95.5 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 73/234 (31%), Positives = 90/234 (38%)
Query: 40 CPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVL-GPHQ 98
CP C +C CL S G +GGW C WSS L +C+SPSY L C G CG +L GP
Sbjct: 2057 CPTPCHLLPNCTSCLDSKGADGGWQHCVWSSSLQQCLSPSYLPLRCMAGGCGRLLRGPES 2116
Query: 99 APQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTXXXXXXXXXXXXXXTCDILF 158
C C+ TQC+ CLR HCGWCA GG + F
Sbjct: 2117 ---CSLGCAQATQCALCLRRPHCGWCAWGGQDGGGRCMEGGLSGPRDGLTCGRPGASWAF 2173
Query: 159 YQTYPDQVIEVNNNDSFSWNYVKCPPENECLNDHH--TCDPQSEQCVDLADGFEC--VCG 214
P+ ++D C C + H C ++ +D G C VC
Sbjct: 2174 LSCPPEDECANGHHD--------CNETQNCHDQPHGYECSCKTGYTMDNMTGL-CRPVCA 2224
Query: 215 RG-YNKS-EEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQ-CNGH 265
+G N S E C C G V CS +C GV C C H
Sbjct: 2225 QGCVNGSCVEPDHCR--CHFGFVGRNCSTECRCNRHSECAGVGARDHCLLCRNH 2276
Score = 214 (80.4 bits), Expect = 9.3e-27, Sum P(2) = 9.3e-27
Identities = 55/169 (32%), Positives = 73/169 (43%)
Query: 177 WNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVR 236
W Y +CP +EC C P++ C++ +EC C RGY + + C C + C
Sbjct: 1067 WAYARCPDVDECRLGLARCHPRAT-CLNTPLSYECHCQRGY-QGDGISHCNRTCLEDCGH 1124
Query: 237 GVCS-EPD-KCQCDFGYVG-------------VNCSIQCQCNGHADCA--GPDKLDVCLR 279
GVCS PD C CD G+ CS C C+ H+ C GP C
Sbjct: 1125 GVCSGPPDFTCVCDLGWTSDLPPPTPAPGPPAPRCSRDCGCSFHSHCRKRGPG---FCDE 1181
Query: 280 CHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGH----TGLCINAS 324
C + T G C++C P G+ + C PC CNGH G C N S
Sbjct: 1182 CQDWTWGEHCERCRPGSFGNATGSRGCRPCQ--CNGHGDPRRGHCDNLS 1228
Score = 173 (66.0 bits), Expect = 1.6e-63, Sum P(2) = 1.6e-63
Identities = 37/105 (35%), Positives = 50/105 (47%)
Query: 34 LKTGSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNEC-ISPSYEALYCAGGVCGL 92
LK+ CP C QR C+DCL +S +C W + C + +Y A Y GG G
Sbjct: 940 LKSPEECPPLCSQRLTCEDCLANSS------QCAWCQSTHTCFLFAAYLARYPHGGCRGW 993
Query: 93 VLGPHQAPQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVC 137
H P+C RSC + C CL+ CGWC + + T +G C
Sbjct: 994 DDSVHSEPRC-RSCDGFLTCHECLQSHECGWCGNEDNPT--LGRC 1035
Score = 130 (50.8 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 33/79 (41%), Positives = 36/79 (45%)
Query: 260 CQCNGHADCA-GP-DKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHT 317
CQCNGH D G D L C +HT+G C C P Y GDPR G C C G
Sbjct: 1211 CQCNGHGDPRRGHCDNLSGLCFCQDHTEGAHCQLCSPGYYGDPRAGGSCF---RECGGRA 1267
Query: 318 GLCINASLASLPFSPESGG 336
L N S +L S GG
Sbjct: 1268 -LLTNVSSVALG-SRRVGG 1284
Score = 99 (39.9 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 45/176 (25%), Positives = 69/176 (39%)
Query: 188 CLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRG---VCSEPDK 244
C N HT EQC+ L G + GG C P C C RG +C +
Sbjct: 2273 CRN--HTKGSHCEQCLPLFVG----------SAVGGGTCRP-CHAFC-RGNSHICISRKE 2318
Query: 245 CQCDFGYVGVNCSIQCQCNGHADCAGPDKLD-VCLRCHNHTKGPQCDKC-EPLYVGDPRD 302
Q G S+ + + GP + + VC+ C N++ G +C+ C + ++ D
Sbjct: 2319 LQMSKGEPK-KYSLDPEEIENWVTEGPSEDEAVCVNCQNNSYGEKCESCLQGYFLLD--- 2374
Query: 303 NGECVPCSEYCNGHTGLCINASLASLPFSPESG-GTSELAAFLDEGPTTRARCMHC 357
G+C C CNGH C P + GT + ++ D + +C C
Sbjct: 2375 -GKCTKCQ--CNGHADTCNEQDGTGCPCQNNTETGTCQGSSPSDRRDCYKYQCAKC 2427
Score = 96 (38.9 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 27/78 (34%), Positives = 37/78 (47%)
Query: 243 DKCQ-CDFGYVGVN--CSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGD 299
+KC+ C GY ++ C+ +CQCNGHAD C C N+T+ C P D
Sbjct: 2361 EKCESCLQGYFLLDGKCT-KCQCNGHADTCNEQDGTGC-PCQNNTETGTCQGSSP---SD 2415
Query: 300 PRD--NGECVPCSEYCNG 315
RD +C C E +G
Sbjct: 2416 RRDCYKYQCAKCRESFHG 2433
Score = 80 (33.2 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 32/106 (30%), Positives = 43/106 (40%)
Query: 210 ECVCGRGYNKSEEGGECVPVCSQG--CVRGVCSEPDKCQCDFGYVGVNCSIQ----CQCN 263
E VC N S GE C QG + G C+ KCQC+ G+ C+ Q C C
Sbjct: 2348 EAVCVNCQNNSY--GEKCESCLQGYFLLDGKCT---KCQCN-GHADT-CNEQDGTGCPCQ 2400
Query: 264 GHAD---CAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGEC 306
+ + C G D C+ + QC KC + G P +C
Sbjct: 2401 NNTETGTCQGSSPSDR-RDCYKY----QCAKCRESFHGSPLGGQQC 2441
Score = 79 (32.9 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 29/88 (32%), Positives = 36/88 (40%)
Query: 208 GFECVCGRGYNKSEEGGECVPVCSQGCV-RGVCSEPDKCQCDFGYVGVNCSIQ-C--QCN 263
GF G S G C PV Q CV + + C+C G+ G +C + C CN
Sbjct: 1397 GFNASVGSARCGSGGPGSC-PV-PQECVPQDGAAGAGLCRCPQGWAGPHCRMALCPENCN 1454
Query: 264 GHADCAGP--DKLDVCLRCHNHTKGPQC 289
H AG L VC+ C GP C
Sbjct: 1455 AHTG-AGTCNQSLGVCI-CAEGFGGPDC 1480
Score = 72 (30.4 bits), Expect = 7.0e-53, Sum P(2) = 7.0e-53
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 100 PQCPRSCSAYTQCSTCLRHAHCGWC 124
P SC++Y+ C CL CGWC
Sbjct: 842 PYRSSSCTSYSSCLGCLADQGCGWC 866
Score = 69 (29.3 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 15/50 (30%), Positives = 23/50 (46%)
Query: 211 CVCGRGYNKSEEG-GECVPVCSQGCVRGVCSEP-DKCQCDFGYVGVNCSI 258
C C G+ + G EC C G C+ P C+C+ G++G C +
Sbjct: 158 CACEPGWGGPDCGLQECSAYCGS---HGTCASPLGPCRCEPGFLGRACDL 204
Score = 66 (28.3 bits), Expect = 3.0e-52, Sum P(2) = 3.0e-52
Identities = 15/36 (41%), Positives = 16/36 (44%)
Query: 106 CSAYTQCSTCLRHAHCGWC--ALQRDTTGG--MGVC 137
CS YT S C R C WC A Q G +G C
Sbjct: 562 CSMYTDHSVCSRDPECSWCQGACQAAPPPGTPLGAC 597
Score = 64 (27.6 bits), Expect = 4.9e-52, Sum P(2) = 4.9e-52
Identities = 20/61 (32%), Positives = 27/61 (44%)
Query: 59 GEGGWHECRWSSMLNECISPSYEALYCAGGVCGLV---LGPH-QAPQCPRSCSAYTQCST 114
G GG C + EC+ P A G+C GPH + CP +C+A+T T
Sbjct: 1408 GSGGPGSC---PVPQECV-PQDGA--AGAGLCRCPQGWAGPHCRMALCPENCNAHTGAGT 1461
Query: 115 C 115
C
Sbjct: 1462 C 1462
Score = 60 (26.2 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 28/99 (28%), Positives = 37/99 (37%)
Query: 253 GVNCSI---QCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPC 309
G N S+ +C G C P + C+ C +C + G P + C
Sbjct: 1397 GFNASVGSARCGSGGPGSCPVPQE---CVPQDGAAGAGLC-RCPQGWAG-P--HCRMALC 1449
Query: 310 SEYCNGHTGL-CINASLASLPFSPESGGTSELAAFLDEG 347
E CN HTG N SL + E G + A LD G
Sbjct: 1450 PENCNAHTGAGTCNQSLG-VCICAEGFGGPDCATKLDGG 1487
Score = 59 (25.8 bits), Expect = 1.6e-51, Sum P(2) = 1.6e-51
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 83 LYCAGGVCGLVLGPHQAPQCPRS-CSAYTQCSTCLRHAHCGWC 124
LY +GG G+ LG A P C + C + C WC
Sbjct: 1853 LYISGGFGGVALGRLLALTLPPDPCRLLSSPEACNQSGACTWC 1895
Score = 57 (25.1 bits), Expect = 2.6e-51, Sum P(2) = 2.6e-51
Identities = 14/35 (40%), Positives = 15/35 (42%)
Query: 34 LKTGSSCPLRCDQRTDCQDCLTSSGGEGGWHECRW 68
L+ SC L C Q T C CL GW C W
Sbjct: 2111 LRGPESCSLGCAQATQCALCLRRP--HCGW--CAW 2141
Score = 57 (25.1 bits), Expect = 2.6e-51, Sum P(2) = 2.6e-51
Identities = 18/55 (32%), Positives = 20/55 (36%)
Query: 66 CRWSSMLNECISPSY-EALYCAGGVCGLVLGPHQAPQCPRSCSAYTQCSTCL-RH 118
C W C+S L C G C P P+ P C CS CL RH
Sbjct: 1892 CTWCH--GACLSGDQAHRLGCGGSPCS----P--MPRSPEECRRLRTCSECLARH 1938
Score = 54 (24.1 bits), Expect = 5.5e-51, Sum P(2) = 5.5e-51
Identities = 20/93 (21%), Positives = 28/93 (30%)
Query: 41 PLRCDQRTDCQDCLTS-------SGGEGGWHECRWSSMLNE--CISPSYEALYCAGGVCG 91
P C + C +CL GE C+W + E CI + + C
Sbjct: 1922 PEECRRLRTCSECLARHPRTLQPGDGEASTPRCKWCTNCPEGACIGRNGSCT--SENDCR 1979
Query: 92 LVLGP-HQAPQCPRSCSAYTQCSTCLRHAHCGW 123
+ A C + C C R C W
Sbjct: 1980 INQREVFWAGNCSEAACGAADCEQCTREGKCMW 2012
Score = 51 (23.0 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 16/44 (36%), Positives = 20/44 (45%)
Query: 95 GPHQAPQCPRSCSAYTQCSTCLRHAHC-----GWCALQRDTTGG 133
GP AP+C R C C H+HC G+C +D T G
Sbjct: 1153 GP-PAPRCSRDCG-------CSFHSHCRKRGPGFCDECQDWTWG 1188
Score = 45 (20.9 bits), Expect = 4.8e-50, Sum P(2) = 4.8e-50
Identities = 14/45 (31%), Positives = 17/45 (37%)
Query: 102 CPRSCSAYTQCS---TCLRHAHCGW----CALQRDTT--GGMGVC 137
CP C ++ QC C GW C LQ + G G C
Sbjct: 142 CPGGCQSHGQCQPPGVCA--CEPGWGGPDCGLQECSAYCGSHGTC 184
Score = 43 (20.2 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 27/108 (25%), Positives = 37/108 (34%)
Query: 280 CHNHTKGPQCDKCEPLYVGD--PRDNGECVP-CSE-YCNG---HTGLCINASLASLPFSP 332
C N +C C+ Y GD N C+ C C+G T +C + LP
Sbjct: 1091 CLNTPLSYECH-CQRGYQGDGISHCNRTCLEDCGHGVCSGPPDFTCVCDLGWTSDLPPPT 1149
Query: 333 ESGGTSELAAFLDEGPTTRARCM--------HCGNHTTGPKCEDCVEG 372
+ G D G + + C C + T G CE C G
Sbjct: 1150 PAPGPPAPRCSRDCGCSFHSHCRKRGPGFCDECQDWTWGEHCERCRPG 1197
>MGI|MGI:2446294 [details] [associations]
symbol:Megf8 "multiple EGF-like-domains 8" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0060287
"epithelial cilium movement involved in determination of left/right
asymmetry" evidence=IMP] [GO:0061371 "determination of heart
left/right asymmetry" evidence=ISO;IMP] [GO:0071907 "determination
of digestive tract left/right asymmetry" evidence=ISO;IMP]
[GO:1900164 "nodal signaling pathway involved in determination of
lateral mesoderm left/right asymmetry" evidence=ISO]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR002165
InterPro:IPR015915 InterPro:IPR018097 Pfam:PF01437 Pfam:PF07645
PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 MGI:MGI:2446294 GO:GO:0016021 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027 Gene3D:2.60.120.290
InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854
PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 CTD:1954 eggNOG:NOG304142
HOVERGEN:HBG108128 OMA:GHSMVFH EMBL:EU723517 EMBL:BC031185
EMBL:BC036727 EMBL:BC051121 EMBL:BC060277 EMBL:AK122377
EMBL:AK030408 IPI:IPI00930841 RefSeq:NP_001153872.1
UniGene:Mm.38527 ProteinModelPortal:P60882 SMR:P60882
PhosphoSite:P60882 PaxDb:P60882 PRIDE:P60882
Ensembl:ENSMUST00000128119 GeneID:269878 KEGG:mmu:269878
UCSC:uc009fsj.2 InParanoid:B3GR00 OrthoDB:EOG4JHCDR NextBio:393077
Bgee:P60882 CleanEx:MM_MEGF8 Genevestigator:P60882
GermOnline:ENSMUSG00000045039 Uniprot:P60882
Length = 2789
Score = 527 (190.6 bits), Expect = 2.0e-63, Sum P(2) = 2.0e-63
Identities = 89/201 (44%), Positives = 123/201 (61%)
Query: 176 SWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCV 235
SW ++ CPPE+EC N HH C+ +++ C D G+EC C GY G C PVC+QGCV
Sbjct: 2114 SWAFLSCPPEDECANGHHDCN-ETQNCHDQPHGYECSCKTGYTMDNVTGVCRPVCAQGCV 2172
Query: 236 RGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPL 295
G C EPD C+C FG+VG NCS +C+CN H++CAG D CL C NHTKG C++C PL
Sbjct: 2173 NGSCVEPDHCRCHFGFVGRNCSTECRCNRHSECAGVGAQDHCLLCRNHTKGSHCEQCLPL 2232
Query: 296 YVGDPRDNGECVPCSEYCNGHTGLCINAS-LASLPFSPE--SGGTSELAAFLDEGPTT-R 351
+VG G C PC +C G++ +C++ L PE S E+ ++ EGP+
Sbjct: 2233 FVGSALGGGTCRPCHAFCRGNSHVCVSRKELEMARKEPEKYSLDPEEIETWVAEGPSEDE 2292
Query: 352 ARCMHCGNHTTGPKCEDCVEG 372
A C++C N++ G +CE C+ G
Sbjct: 2293 AVCVNCQNNSYGDRCESCLHG 2313
Score = 258 (95.9 bits), Expect = 5.5e-25, Sum P(2) = 5.5e-25
Identities = 73/234 (31%), Positives = 90/234 (38%)
Query: 40 CPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVL-GPHQ 98
CP C +C CL S G +GGW C WSS L +C+SPSY L C G CG +L GP
Sbjct: 2001 CPTPCHLLPNCTSCLASKGADGGWQHCVWSSSLQQCLSPSYLPLRCMAGGCGRLLRGPES 2060
Query: 99 APQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTXXXXXXXXXXXXXXTCDILF 158
C C+ TQC+ CLR HCGWCA GG + F
Sbjct: 2061 ---CSLGCAQATQCALCLRRPHCGWCAWGGQDGGGHCMEGGLSGPRDGLTCGRPGASWAF 2117
Query: 159 YQTYPDQVIEVNNNDSFSWNYVKCPPENECLNDHH--TCDPQSEQCVDLADGFEC--VCG 214
P+ ++D C C + H C ++ +D G C VC
Sbjct: 2118 LSCPPEDECANGHHD--------CNETQNCHDQPHGYECSCKTGYTMDNVTGV-CRPVCA 2168
Query: 215 RG-YNKS-EEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQ-CNGH 265
+G N S E C C G V CS +C GV C C H
Sbjct: 2169 QGCVNGSCVEPDHCR--CHFGFVGRNCSTECRCNRHSECAGVGAQDHCLLCRNH 2220
Score = 218 (81.8 bits), Expect = 3.7e-27, Sum P(2) = 3.7e-27
Identities = 52/157 (33%), Positives = 70/157 (44%)
Query: 177 WNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVR 236
W Y +CP +EC C P++ C++ +EC C RGY + + C C + C
Sbjct: 1067 WAYARCPDVDECRLGLARCHPRAT-CLNTPLSYECHCQRGY-QGDGITHCNRTCLEDCGH 1124
Query: 237 GVCS-EPD-KCQCDFGYVG-------------VNCSIQCQCNGHADCA--GPDKLDVCLR 279
GVCS PD C CD G+ CS C C+ H+ C GP C
Sbjct: 1125 GVCSGPPDFTCVCDLGWTSDLPPPTPAPGPPAPRCSRDCGCSFHSHCRRRGPG---YCDE 1181
Query: 280 CHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGH 316
C + T G C++C P G+ +G C PC CNGH
Sbjct: 1182 CQDWTWGEHCERCRPGSFGNATGSGGCRPCQ--CNGH 1216
Score = 172 (65.6 bits), Expect = 2.0e-63, Sum P(2) = 2.0e-63
Identities = 37/105 (35%), Positives = 49/105 (46%)
Query: 34 LKTGSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNEC-ISPSYEALYCAGGVCGL 92
LK CP C QR C+DCL +S +C W + C + +Y A Y GG G
Sbjct: 940 LKNPEECPPLCSQRLTCEDCLANSS------QCAWCQSTHTCFLFAAYLARYPHGGCRGW 993
Query: 93 VLGPHQAPQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVC 137
H P+C RSC + C CL+ CGWC + + T +G C
Sbjct: 994 DDSVHSEPRC-RSCGGFLTCHECLQSHECGWCGNEDNPT--LGRC 1035
Score = 128 (50.1 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
Identities = 33/79 (41%), Positives = 36/79 (45%)
Query: 260 CQCNGHADCA-GP-DKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHT 317
CQCNGH D G D L C +HT+G C C P Y GDPR G C C G
Sbjct: 1211 CQCNGHGDPRRGHCDNLTGLCFCQDHTEGAHCQICSPGYYGDPRAGGSCF---RECGGRA 1267
Query: 318 GLCINASLASLPFSPESGG 336
L N S +L S GG
Sbjct: 1268 -LLTNVSSVALG-SRRFGG 1284
Score = 99 (39.9 bits), Expect = 5.5e-25, Sum P(2) = 5.5e-25
Identities = 27/78 (34%), Positives = 37/78 (47%)
Query: 243 DKCQ-CDFGYVGVN--CSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGD 299
D+C+ C GY ++ C+ +CQCNGHAD C C N+T+ C P D
Sbjct: 2305 DRCESCLHGYFLLDGKCT-KCQCNGHADTCNEQDGTGC-PCQNNTETGTCQGSSP---SD 2359
Query: 300 PRD--NGECVPCSEYCNG 315
RD +C C E +G
Sbjct: 2360 RRDCYKYQCAKCRESFHG 2377
Score = 92 (37.4 bits), Expect = 3.0e-24, Sum P(2) = 3.0e-24
Identities = 25/90 (27%), Positives = 41/90 (45%)
Query: 270 GPDKLD-VCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASL 328
GP + + VC+ C N++ G +C+ C L+ G +G+C C CNGH C
Sbjct: 2287 GPSEDEAVCVNCQNNSYGDRCESC--LH-GYFLLDGKCTKCQ--CNGHADTCNEQDGTGC 2341
Query: 329 PFSPESG-GTSELAAFLDEGPTTRARCMHC 357
P + GT + ++ D + +C C
Sbjct: 2342 PCQNNTETGTCQGSSPSDRRDCYKYQCAKC 2371
Score = 78 (32.5 bits), Expect = 5.3e-12, Sum P(2) = 5.3e-12
Identities = 29/88 (32%), Positives = 36/88 (40%)
Query: 208 GFECVCGRGYNKSEEGGECVPVCSQGCV-RGVCSEPDKCQCDFGYVGVNCSIQ-C--QCN 263
GF G S G C PV Q CV + + C+C G+ G +C + C CN
Sbjct: 1397 GFNASVGSARCGSGGPGSC-PV-PQECVPQDGAAGAGLCRCPQGWAGPHCRMALCPENCN 1454
Query: 264 GHADCAG--PDKLDVCLRCHNHTKGPQC 289
H AG L VC+ C GP C
Sbjct: 1455 AHTG-AGICNQSLGVCI-CAEGFGGPDC 1480
Score = 76 (31.8 bits), Expect = 8.5e-12, Sum P(2) = 8.5e-12
Identities = 35/128 (27%), Positives = 53/128 (41%)
Query: 191 DHHTCDPQSEQCVDLADG---FECVCGRGYNKSEEGGECVPVCSQG--CVRGVCSEPDKC 245
+ ++ DP+ + +A+G E VC N S G C C G + G C+ KC
Sbjct: 2271 EKYSLDPEEIETW-VAEGPSEDEAVCVNCQNNSY-GDRCES-CLHGYFLLDGKCT---KC 2324
Query: 246 QCDFGYVGVNCSIQ----CQCNGHAD---CAGPDKLDVCLRCHNHTKGPQCDKCEPLYVG 298
QC+ G+ C+ Q C C + + C G D C+ + QC KC + G
Sbjct: 2325 QCN-GHADT-CNEQDGTGCPCQNNTETGTCQGSSPSDR-RDCYKY----QCAKCRESFHG 2377
Query: 299 DPRDNGEC 306
P +C
Sbjct: 2378 SPLGGQQC 2385
Score = 70 (29.7 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 42/149 (28%), Positives = 54/149 (36%)
Query: 244 KCQCDFGYVG---VNCSIQC--QCNGHADCAGP-DKLDVC-------LRCHNHTKGP--- 287
+C C GY G +C+ C C GH C+GP D VC L GP
Sbjct: 1099 ECHCQRGYQGDGITHCNRTCLEDC-GHGVCSGPPDFTCVCDLGWTSDLPPPTPAPGPPAP 1157
Query: 288 QCDK-CEPLYVGDPRDNGE--CVPCSEYCNG-HTGLCINASLASLPFSPESGGTSELAAF 343
+C + C + R G C C ++ G H C S + + SGG
Sbjct: 1158 RCSRDCGCSFHSHCRRRGPGYCDECQDWTWGEHCERCRPGSFGN---ATGSGGCRPCQCN 1214
Query: 344 LDEGPTTRARCMHCGNHTTGPKCEDCVEG 372
G R HC N T C+D EG
Sbjct: 1215 -GHGDPRRG---HCDNLTGLCFCQDHTEG 1239
Score = 69 (29.3 bits), Expect = 1.3e-53, Sum P(3) = 1.3e-53
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 100 PQCPRSCSAYTQCSTCLRHAHCGWC 124
P +C++Y+ C CL CGWC
Sbjct: 842 PYRSSACTSYSSCLGCLADQGCGWC 866
Score = 64 (27.6 bits), Expect = 4.6e-52, Sum P(2) = 4.6e-52
Identities = 10/19 (52%), Positives = 10/19 (52%)
Query: 106 CSAYTQCSTCLRHAHCGWC 124
CS YT S C R C WC
Sbjct: 562 CSMYTDHSVCSRDPECSWC 580
Score = 63 (27.2 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 29/99 (29%), Positives = 38/99 (38%)
Query: 253 GVNCSI---QCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPC 309
G N S+ +C G C P + C+ C +C + G P + C
Sbjct: 1397 GFNASVGSARCGSGGPGSCPVPQE---CVPQDGAAGAGLC-RCPQGWAG-P--HCRMALC 1449
Query: 310 SEYCNGHTGLCI-NASLASLPFSPESGGTSELAAFLDEG 347
E CN HTG I N SL + E G + A LD G
Sbjct: 1450 PENCNAHTGAGICNQSLG-VCICAEGFGGPDCATKLDGG 1487
Score = 58 (25.5 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
Identities = 19/61 (31%), Positives = 26/61 (42%)
Query: 59 GEGGWHECRWSSMLNECISPSYEALYCAGGVCGLV---LGPH-QAPQCPRSCSAYTQCST 114
G GG C + EC+ P A G+C GPH + CP +C+A+T
Sbjct: 1408 GSGGPGSC---PVPQECV-PQDGA--AGAGLCRCPQGWAGPHCRMALCPENCNAHTGAGI 1461
Query: 115 C 115
C
Sbjct: 1462 C 1462
Score = 57 (25.1 bits), Expect = 2.4e-52, Sum P(3) = 2.4e-52
Identities = 14/43 (32%), Positives = 17/43 (39%)
Query: 83 LYCAGGVCGLVLGPHQAPQCPRS-CSAYTQCSTCLRHAHCGWC 124
LY +GG G+ LG A P C C + C WC
Sbjct: 1797 LYISGGFGGVALGRLLALTLPPDPCRLLPSPEACNQSGACTWC 1839
Score = 57 (25.1 bits), Expect = 2.5e-51, Sum P(2) = 2.5e-51
Identities = 14/35 (40%), Positives = 15/35 (42%)
Query: 34 LKTGSSCPLRCDQRTDCQDCLTSSGGEGGWHECRW 68
L+ SC L C Q T C CL GW C W
Sbjct: 2055 LRGPESCSLGCAQATQCALCLRRP--HCGW--CAW 2085
Score = 53 (23.7 bits), Expect = 6.6e-51, Sum P(2) = 6.6e-51
Identities = 20/93 (21%), Positives = 28/93 (30%)
Query: 41 PLRCDQRTDCQDCLTS-------SGGEGGWHECRWSSMLNE--CISPSYEALYCAGGVCG 91
P C + C +CL GE C+W + E CI + + C
Sbjct: 1866 PEECRRLRTCSECLARHPRTLQPGDGEASIPRCKWCTNCPEGACIGRNGSCT--SENDCR 1923
Query: 92 LVLGP-HQAPQCPRSCSAYTQCSTCLRHAHCGW 123
+ A C + C C R C W
Sbjct: 1924 INQREVFWAGNCSEAACGAADCEQCTREGKCMW 1956
Score = 52 (23.4 bits), Expect = 8.0e-52, Sum P(3) = 8.0e-52
Identities = 16/44 (36%), Positives = 20/44 (45%)
Query: 95 GPHQAPQCPRSCSAYTQCSTCLRHAHC-----GWCALQRDTTGG 133
GP AP+C R C C H+HC G+C +D T G
Sbjct: 1153 GP-PAPRCSRDCG-------CSFHSHCRRRGPGYCDECQDWTWG 1188
Score = 47 (21.6 bits), Expect = 2.7e-51, Sum P(3) = 2.7e-51
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 100 PQCPRSCSAYTQCSTCL-RH 118
P+ P C CS CL RH
Sbjct: 1863 PRSPEECRRLRTCSECLARH 1882
Score = 45 (20.9 bits), Expect = 4.6e-50, Sum P(2) = 4.6e-50
Identities = 14/45 (31%), Positives = 18/45 (40%)
Query: 102 CPRSCSAYTQCST---CLRHAHCGW----CALQRDTT--GGMGVC 137
CP C + QC + C+ GW C LQ + G G C
Sbjct: 142 CPGGCQNHGQCKSPGVCV--CEPGWGGPDCGLQECSAYCGSHGTC 184
Score = 43 (20.2 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 27/108 (25%), Positives = 37/108 (34%)
Query: 280 CHNHTKGPQCDKCEPLYVGD--PRDNGECVP-CSE-YCNG---HTGLCINASLASLPFSP 332
C N +C C+ Y GD N C+ C C+G T +C + LP
Sbjct: 1091 CLNTPLSYECH-CQRGYQGDGITHCNRTCLEDCGHGVCSGPPDFTCVCDLGWTSDLPPPT 1149
Query: 333 ESGGTSELAAFLDEGPTTRARCMH--------CGNHTTGPKCEDCVEG 372
+ G D G + + C C + T G CE C G
Sbjct: 1150 PAPGPPAPRCSRDCGCSFHSHCRRRGPGYCDECQDWTWGEHCERCRPG 1197
Score = 38 (18.4 bits), Expect = 1.3e-53, Sum P(3) = 1.3e-53
Identities = 14/43 (32%), Positives = 16/43 (37%)
Query: 48 TDCQDCLTSSGGEG---GWHECRWSSMLNECISPSYEALYCAG 87
+DCQ CL S G W + NE P E C G
Sbjct: 610 SDCQACLAFSSPTAPPRGPGALGWC-VHNESCLPRPEQARCRG 651
>UNIPROTKB|E2RM39 [details] [associations]
symbol:MEGF8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002165 InterPro:IPR015915
InterPro:IPR018097 Pfam:PF01437 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0016021 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 OMA:GHSMVFH EMBL:AAEX03000913
EMBL:AAEX03000914 Ensembl:ENSCAFT00000007776 Uniprot:E2RM39
Length = 2787
Score = 524 (189.5 bits), Expect = 5.2e-63, Sum P(2) = 5.2e-63
Identities = 89/201 (44%), Positives = 122/201 (60%)
Query: 176 SWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCV 235
SW ++ CPPE+EC N HH C+ +++ C D G+EC C GY G C PVC+QGCV
Sbjct: 2112 SWAFLSCPPEDECANGHHDCN-ETQNCHDRPHGYECSCKAGYTMDNVTGLCRPVCAQGCV 2170
Query: 236 RGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPL 295
G C EPD C+C FG+VG NCS +C+CN H++CAG D CL C NHTKG C++C PL
Sbjct: 2171 NGSCVEPDHCRCHFGFVGRNCSTECRCNRHSECAGVGARDHCLLCRNHTKGSHCEQCLPL 2230
Query: 296 YVGDPRDNGECVPCSEYCNGHTGLCINAS-LASLPFSPESG--GTSELAAFLDEGPTT-R 351
+VG G C PC +C G++ +C++ L PE E+ ++ EGP+
Sbjct: 2231 FVGSAVGGGTCRPCHAFCRGNSHVCVSRKELEMARKEPEKYPLDPEEIENWVTEGPSEDE 2290
Query: 352 ARCMHCGNHTTGPKCEDCVEG 372
A C++C N++ G KCE C+ G
Sbjct: 2291 AVCVNCQNNSYGDKCESCLHG 2311
Score = 256 (95.2 bits), Expect = 5.5e-25, Sum P(2) = 5.5e-25
Identities = 73/234 (31%), Positives = 90/234 (38%)
Query: 40 CPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVL-GPHQ 98
CP C +C CL S G +GGW C WSS L +C+SPSY L C G CG +L GP
Sbjct: 1999 CPTPCHLLPNCTSCLDSKGADGGWQHCVWSSSLQQCLSPSYLPLRCMAGGCGRLLRGPES 2058
Query: 99 APQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTXXXXXXXXXXXXXXTCDILF 158
C C+ TQC+ CLR HCGWCA GG + F
Sbjct: 2059 ---CSLGCAQATQCALCLRRPHCGWCAWGGQDGGGHCLEGGLSGPRDGLTCGRPEASWAF 2115
Query: 159 YQTYPDQVIEVNNNDSFSWNYVKCPPENECLNDHH--TCDPQSEQCVDLADGFEC--VCG 214
P+ ++D C C + H C ++ +D G C VC
Sbjct: 2116 LSCPPEDECANGHHD--------CNETQNCHDRPHGYECSCKAGYTMDNVTGL-CRPVCA 2166
Query: 215 RG-YNKS-EEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQ-CNGH 265
+G N S E C C G V CS +C GV C C H
Sbjct: 2167 QGCVNGSCVEPDHCR--CHFGFVGRNCSTECRCNRHSECAGVGARDHCLLCRNH 2218
Score = 213 (80.0 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 56/169 (33%), Positives = 73/169 (43%)
Query: 177 WNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVR 236
W Y +CP +EC C ++ C++ +EC C RGY + + C C + C
Sbjct: 1066 WAYARCPDVDECRLGLARCHLRAT-CLNTPLSYECHCQRGY-QGDGITYCNRTCLEDCGH 1123
Query: 237 GVCS-EPD-KCQCDFGYVG-------------VNCSIQCQCNGHADCA--GPDKLDVCLR 279
GVCS PD C CD G+ CS C CN H+ C GP C
Sbjct: 1124 GVCSGPPDFTCVCDLGWTSDLPPPTPAPGPPAPRCSRDCGCNFHSHCRKRGPG---FCDE 1180
Query: 280 CHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGH----TGLCINAS 324
C + T G C++C P G+ +G C PC CNGH G C N S
Sbjct: 1181 CQDWTWGEHCERCRPGSFGNATGSGGCRPCQ--CNGHGDPRRGHCDNLS 1227
Score = 171 (65.3 bits), Expect = 5.2e-63, Sum P(2) = 5.2e-63
Identities = 38/110 (34%), Positives = 51/110 (46%)
Query: 29 RTNIKLKTGSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNEC-ISPSYEALYCAG 87
R+ LK+ CP C QR C DCL +S +C W + C + +Y A Y G
Sbjct: 934 RSRGALKSPEECPPLCSQRLTCDDCLANSS------QCAWCQSTHTCFLFAAYLARYPHG 987
Query: 88 GVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVC 137
G G H P+C RSC + C CL+ CGWC + + T +G C
Sbjct: 988 GCRGWDDSVHSEPRC-RSCDRFLTCHECLQSHECGWCGNEDNPT--LGRC 1034
Score = 129 (50.5 bits), Expect = 3.5e-17, Sum P(2) = 3.5e-17
Identities = 33/79 (41%), Positives = 36/79 (45%)
Query: 260 CQCNGHADCA-GP-DKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHT 317
CQCNGH D G D L C +HT+G C C P Y GDPR G C C G
Sbjct: 1210 CQCNGHGDPRRGHCDNLSGLCFCQDHTEGAHCQFCSPGYYGDPRAGGSCF---RECGGRA 1266
Query: 318 GLCINASLASLPFSPESGG 336
L N S +L S GG
Sbjct: 1267 -LLTNVSSVALG-SRRVGG 1283
Score = 102 (41.0 bits), Expect = 5.5e-25, Sum P(2) = 5.5e-25
Identities = 28/78 (35%), Positives = 37/78 (47%)
Query: 243 DKCQ-CDFGYVGVN--CSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGD 299
DKC+ C GY ++ C+ +CQCNGHAD C C N+T+ C P D
Sbjct: 2303 DKCESCLHGYFLLDGKCT-KCQCNGHADTCNEQDGTGC-PCQNNTETGTCQGSSP---SD 2357
Query: 300 PRD--NGECVPCSEYCNG 315
RD +C C E +G
Sbjct: 2358 RRDCYKYQCAKCRESFHG 2375
Score = 92 (37.4 bits), Expect = 6.1e-24, Sum P(2) = 6.1e-24
Identities = 25/90 (27%), Positives = 41/90 (45%)
Query: 270 GPDKLD-VCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASL 328
GP + + VC+ C N++ G +C+ C L+ G +G+C C CNGH C
Sbjct: 2285 GPSEDEAVCVNCQNNSYGDKCESC--LH-GYFLLDGKCTKCQ--CNGHADTCNEQDGTGC 2339
Query: 329 PFSPESG-GTSELAAFLDEGPTTRARCMHC 357
P + GT + ++ D + +C C
Sbjct: 2340 PCQNNTETGTCQGSSPSDRRDCYKYQCAKC 2369
Score = 79 (32.9 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 28/88 (31%), Positives = 37/88 (42%)
Query: 208 GFECVCGRGYNKSEEGGECVPVCSQGCV-RGVCSEPDKCQCDFGYVGVNCSIQ-C--QCN 263
GF G S G C PV Q C+ + + C+C G+ G +C + C CN
Sbjct: 1396 GFNASVGSARCGSGGPGSC-PV-PQECIPQDGATGAGLCRCPQGWAGPHCRMALCPENCN 1453
Query: 264 GHADCAGP--DKLDVCLRCHNHTKGPQC 289
H+ AG L VC+ C GP C
Sbjct: 1454 AHSG-AGTCNQSLGVCI-CAEGFGGPDC 1479
Score = 76 (31.8 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 31/106 (29%), Positives = 43/106 (40%)
Query: 210 ECVCGRGYNKSEEGGECVPVCSQG--CVRGVCSEPDKCQCDFGYVGVNCSIQ----CQCN 263
E VC N S G +C C G + G C+ KCQC+ G+ C+ Q C C
Sbjct: 2290 EAVCVNCQNNSY-GDKCES-CLHGYFLLDGKCT---KCQCN-GHADT-CNEQDGTGCPCQ 2342
Query: 264 GHAD---CAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGEC 306
+ + C G D C+ + QC KC + G P +C
Sbjct: 2343 NNTETGTCQGSSPSDR-RDCYKY----QCAKCRESFHGSPLGGQQC 2383
Score = 72 (30.4 bits), Expect = 1.4e-52, Sum P(2) = 1.4e-52
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 100 PQCPRSCSAYTQCSTCLRHAHCGWC 124
P +CS+Y+ C CL CGWC
Sbjct: 841 PYRSSACSSYSSCLGCLADQGCGWC 865
Score = 64 (27.6 bits), Expect = 9.5e-52, Sum P(2) = 9.5e-52
Identities = 10/19 (52%), Positives = 10/19 (52%)
Query: 106 CSAYTQCSTCLRHAHCGWC 124
CS YT S C R C WC
Sbjct: 561 CSMYTDHSVCSRDPECSWC 579
Score = 62 (26.9 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 28/99 (28%), Positives = 38/99 (38%)
Query: 253 GVNCSI---QCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPC 309
G N S+ +C G C P + C+ T C +C + G P + C
Sbjct: 1396 GFNASVGSARCGSGGPGSCPVPQE---CIPQDGATGAGLC-RCPQGWAG-P--HCRMALC 1448
Query: 310 SEYCNGHTGL-CINASLASLPFSPESGGTSELAAFLDEG 347
E CN H+G N SL + E G + A LD G
Sbjct: 1449 PENCNAHSGAGTCNQSLG-VCICAEGFGGPDCATKLDGG 1486
Score = 61 (26.5 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
Identities = 25/90 (27%), Positives = 31/90 (34%)
Query: 34 LKTGSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLN--ECISPSYEALYCAGGVCG 91
L+ SC L C Q T C CL GW C W C+ +G G
Sbjct: 2053 LRGPESCSLGCAQATQCALCLRRP--HCGW--CAWGGQDGGGHCLEGGL-----SGPRDG 2103
Query: 92 LVLGPHQAPQCPRSCSAYTQCSTCLRHAHC 121
L G +A SC +C+ H C
Sbjct: 2104 LTCGRPEASWAFLSCPPEDECAN--GHHDC 2131
Score = 60 (26.2 bits), Expect = 2.5e-51, Sum P(2) = 2.5e-51
Identities = 20/61 (32%), Positives = 27/61 (44%)
Query: 59 GEGGWHECRWSSMLNECISPSYEALYCAGGVCGLV---LGPH-QAPQCPRSCSAYTQCST 114
G GG C + ECI P A G+C GPH + CP +C+A++ T
Sbjct: 1407 GSGGPGSC---PVPQECI-PQDGAT--GAGLCRCPQGWAGPHCRMALCPENCNAHSGAGT 1460
Query: 115 C 115
C
Sbjct: 1461 C 1461
Score = 57 (25.1 bits), Expect = 5.2e-51, Sum P(2) = 5.2e-51
Identities = 14/43 (32%), Positives = 17/43 (39%)
Query: 83 LYCAGGVCGLVLGPHQAPQCPRS-CSAYTQCSTCLRHAHCGWC 124
LY +GG G+ LG A P C C + C WC
Sbjct: 1795 LYLSGGFGGVALGRLLALTLPPDPCRLLPSPEACNQSGACTWC 1837
Score = 55 (24.4 bits), Expect = 8.4e-51, Sum P(2) = 8.4e-51
Identities = 18/55 (32%), Positives = 20/55 (36%)
Query: 66 CRWSSMLNECISPSY-EALYCAGGVCGLVLGPHQAPQCPRSCSAYTQCSTCL-RH 118
C W C+S L C G C P P+ P C CS CL RH
Sbjct: 1834 CTWCH--GACLSGDQAHRLGCGGPPCS----P--MPRSPEECRRLRTCSECLARH 1880
Score = 52 (23.4 bits), Expect = 1.7e-50, Sum P(2) = 1.7e-50
Identities = 20/93 (21%), Positives = 28/93 (30%)
Query: 41 PLRCDQRTDCQDCLTS-------SGGEGGWHECRWSSMLNE--CISPSYEALYCAGGVCG 91
P C + C +CL GE C+W + E CI + + C
Sbjct: 1864 PEECRRLRTCSECLARHPRTLQPGDGEASAPRCKWCTNCPEGACIGRNGSCT--SENDCR 1921
Query: 92 LVLGP-HQAPQCPRSCSAYTQCSTCLRHAHCGW 123
+ A C + C C R C W
Sbjct: 1922 INQREVFWAGNCSEAVCGAADCEQCTREGKCMW 1954
Score = 50 (22.7 bits), Expect = 2.8e-50, Sum P(2) = 2.8e-50
Identities = 16/44 (36%), Positives = 20/44 (45%)
Query: 95 GPHQAPQCPRSCSAYTQCSTCLRHAHC-----GWCALQRDTTGG 133
GP AP+C R C C H+HC G+C +D T G
Sbjct: 1152 GP-PAPRCSRDCG-------CNFHSHCRKRGPGFCDECQDWTWG 1187
Score = 47 (21.6 bits), Expect = 5.9e-50, Sum P(2) = 5.9e-50
Identities = 14/43 (32%), Positives = 17/43 (39%)
Query: 102 CPRSCSAYTQCSTC-LRHAHCGW----CALQRDTT--GGMGVC 137
CP CS + QC + GW C+LQ G G C
Sbjct: 141 CPGGCSGHGQCQAPGVCTCEPGWGGPDCSLQECPAYCGSHGTC 183
Score = 42 (19.8 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 95 GPHQAPQ-CPRSCSAYTQCSTCLRHAHC 121
GP + Q CP C ++ C++ L C
Sbjct: 165 GPDCSLQECPAYCGSHGTCASPLGPCRC 192
Score = 42 (19.8 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 8/19 (42%), Positives = 9/19 (47%)
Query: 354 CMHCGNHTTGPKCEDCVEG 372
C C + T G CE C G
Sbjct: 1178 CDECQDWTWGEHCERCRPG 1196
>ZFIN|ZDB-GENE-090730-1 [details] [associations]
symbol:megf8 "multiple EGF-like-domains 8"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0061371 "determination of heart
left/right asymmetry" evidence=IMP] [GO:0071907 "determination of
digestive tract left/right asymmetry" evidence=IMP] [GO:0007368
"determination of left/right symmetry" evidence=IMP] [GO:1900164
"nodal signaling pathway involved in determination of lateral
mesoderm left/right asymmetry" evidence=IMP] [GO:0042074 "cell
migration involved in gastrulation" evidence=IMP] [GO:0055113
"epiboly involved in gastrulation with mouth forming second"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR006652 InterPro:IPR015915
InterPro:IPR018097 Pfam:PF01344 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-090730-1 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.120.10.80 GO:GO:0007368 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0042074 GO:GO:0055113
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 InterPro:IPR024731 Pfam:PF12947
EMBL:BX571757 EMBL:BX571761 IPI:IPI00933480
Ensembl:ENSDART00000110951 Uniprot:F1R219
Length = 2774
Score = 528 (190.9 bits), Expect = 5.2e-55, Sum P(4) = 5.2e-55
Identities = 88/201 (43%), Positives = 123/201 (61%)
Query: 176 SWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCV 235
SW+++ CP E+EC N HH C+ ++ C DL +G+ C C +GY S G+C PVC+QGCV
Sbjct: 2114 SWSFLHCPEEDECSNGHHHCNV-TQDCHDLPEGYHCTCRQGYVLSSVSGQCEPVCAQGCV 2172
Query: 236 RGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPL 295
G C P CQC FG+VG NCS QC+CN H++C +LD CL C N+TKG CDKC+PL
Sbjct: 2173 NGTCISPGICQCHFGFVGENCSSQCRCNKHSNCKSISQLDTCLECKNNTKGQHCDKCKPL 2232
Query: 296 YVGDPRDNGECVPCSEYCNGHTGLCINASLASLPF-SPESG--GTSELAAFLDEGPTT-R 351
+VG G C PC E+C G++ +C++ + +P+ + + EGPT
Sbjct: 2233 FVGSAMGGGMCRPCREFCRGNSDICLSKDEHNKAMENPKDYPLDRESIEQWATEGPTEDH 2292
Query: 352 ARCMHCGNHTTGPKCEDCVEG 372
A C+ C N++ G KCE C+ G
Sbjct: 2293 AVCVSCQNNSVGDKCESCLSG 2313
Score = 351 (128.6 bits), Expect = 1.4e-33, Sum P(3) = 1.4e-33
Identities = 93/307 (30%), Positives = 127/307 (41%)
Query: 34 LKTGSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECIS-PSYEALYCAGGVCGL 92
++ CP C+QR C +CL++S +C W C +Y + G
Sbjct: 927 IREPGGCPNVCNQRLTCGECLSNSS------QCAWCESAQSCFYFAAYLTKFPYGECRDW 980
Query: 93 VLGPHQAPQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTXXXXXXXXXXXXXX 152
H PQC + C+A T CS CL+ CGWC + T +G C
Sbjct: 981 YDSVHSVPQC-KQCTALTTCSECLQTFQCGWCGDYSNPT--IGRCLRGDWGGMNDHSAV- 1036
Query: 153 TCDILFYQTYPDQVIEVNNNDSFSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECV 212
C + + +E + D+ W+Y CP EC HTC P S CV+ +EC
Sbjct: 1037 NCSTAVAEL---EGME-GDGDAV-WSYPSCPDVEECRLGLHTCHP-SATCVNTPTSYECH 1090
Query: 213 CGRGYNKSEEGGECVPVCSQGCVRGVCS-EP-DKCQCDFGYV---------GVNCSIQCQ 261
C RG+ + C C C +G CS P +C+C G+ GV C + C
Sbjct: 1091 CERGFT-GDGVHHCNQTCYNECRQGRCSGSPLFECECSLGWTSDPATLVLSGVECDVDCG 1149
Query: 262 CNGHADC-AGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGE-CVPCSEYCNGH--- 316
CN H+ C P D C + T GP C+ C+P G G+ CVPC CNGH
Sbjct: 1150 CNFHSTCITAPGICDQCQGL-DWTTGPHCEHCKPGSFGSALARGDGCVPCQ--CNGHGDP 1206
Query: 317 -TGLCIN 322
G C N
Sbjct: 1207 LQGFCHN 1213
Score = 232 (86.7 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 69/249 (27%), Positives = 97/249 (38%)
Query: 40 CPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQA 99
CP C + C CL+S G +GGW C WS L +C+SPS+ L C G CG +L +
Sbjct: 2002 CPEPCHEIKTCSQCLSSRGSDGGWQRCVWSMALQQCMSPSFVPLRCEAGQCGRLLSDEDS 2061
Query: 100 PQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTXXXXXXXXXXXXXXTCDILFY 159
C C TQCS C+ CGWCA + G G C +
Sbjct: 2062 --CSPQCFQLTQCSQCISRPQCGWCAGRGGN--GSGRCLQGGLNGVSEALCPQWNSSWSF 2117
Query: 160 QTYPDQVIEVNNNDSFSWNYVKCPPENEC--LNDHHTCDPQSEQCVDLADGFEC--VCGR 215
P++ D S + C +C L + + C + + G +C VC +
Sbjct: 2118 LHCPEE-------DECSNGHHHCNVTQDCHDLPEGYHCTCRQGYVLSSVSG-QCEPVCAQ 2169
Query: 216 GYNKSEEGGECV-P---VCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGP 271
G G C+ P C G V CS +C+C+ NC Q + +C
Sbjct: 2170 GC----VNGTCISPGICQCHFGFVGENCSS--QCRCN---KHSNCKSISQLDTCLECKNN 2220
Query: 272 DKLDVCLRC 280
K C +C
Sbjct: 2221 TKGQHCDKC 2229
Score = 181 (68.8 bits), Expect = 1.8e-12, Sum P(3) = 1.8e-12
Identities = 59/203 (29%), Positives = 83/203 (40%)
Query: 177 WNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVR 236
W+Y CP EC HTC P S CV+ +EC C RG+ + C C C +
Sbjct: 1056 WSYPSCPDVEECRLGLHTCHP-SATCVNTPTSYECHCERGFT-GDGVHHCNQTCYNECRQ 1113
Query: 237 GVCS-EP-DKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTK---GPQ-CD 290
G CS P +C+C G+ ++ +G +C DV C+ H+ P CD
Sbjct: 1114 GRCSGSPLFECECSLGWTSDPATLVL--SG-VEC------DVDCGCNFHSTCITAPGICD 1164
Query: 291 KCEPLYVGDPRDNGECVPCSEYCN-GHTGLCINASLASLPFSPESGGTSELAAFLDEGPT 349
+C+ L D C E+C G G + +P G L F
Sbjct: 1165 QCQGL---DWTTGPHC----EHCKPGSFGSALARGDGCVPCQCNGHG-DPLQGFCHN--- 1213
Query: 350 TRARCMHCGNHTTGPKCEDCVEG 372
+C +C +HT GP CE C+ G
Sbjct: 1214 QTGQC-YCTHHTQGPHCESCLPG 1235
Score = 149 (57.5 bits), Expect = 7.9e-09, Sum P(3) = 7.9e-09
Identities = 49/144 (34%), Positives = 66/144 (45%)
Query: 199 SEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGV-CSEPDKCQ-C---DFGYV- 252
S+ + G EC G N +C Q C +G+ + C+ C FG
Sbjct: 1132 SDPATLVLSGVECDVDCGCNFHSTCITAPGICDQ-C-QGLDWTTGPHCEHCKPGSFGSAL 1189
Query: 253 --GVNCSIQCQCNGHAD-CAG--PDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECV 307
G C + CQCNGH D G ++ C C +HT+GP C+ C P Y GDPRDNG C
Sbjct: 1190 ARGDGC-VPCQCNGHGDPLQGFCHNQTGQCY-CTHHTQGPHCESCLPGYYGDPRDNGTCF 1247
Query: 308 PCSEYCNGHTGLCINASLASLPFS 331
S+ C G + L ++ SL S
Sbjct: 1248 --SQ-CQGRSVLLSSSVPLSLSSS 1268
Score = 94 (38.1 bits), Expect = 9.0e-05, Sum P(4) = 9.0e-05
Identities = 36/119 (30%), Positives = 50/119 (42%)
Query: 243 DKCQ-CDFGYVGVN--CSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGD 299
DKC+ C GY + C +CQCNGHAD C C N+T+ C P D
Sbjct: 2305 DKCESCLSGYFLLQGKCE-KCQCNGHADTCNEHDGTGC-PCQNNTETSSC-LSSPQ--ND 2359
Query: 300 PRD--NGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMH 356
++ +C C E NG+ +N F+ +S F D PT++ C H
Sbjct: 2360 RKECYRQQCAKCKESFNGNP---VNGRQCYRQFNVDSE-----CCF-D--PTSQVNCFH 2407
Score = 75 (31.5 bits), Expect = 9.3e-55, Sum P(3) = 9.3e-55
Identities = 20/69 (28%), Positives = 24/69 (34%)
Query: 61 GGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQA-----PQCPRSCSAYTQCSTC 115
G W+ + LN S + GL G + P SCS Y C C
Sbjct: 783 GNWYLIQAEGYLNNSASGQTSEMALTWNRTGLPGGSEISFLFLEPFRSNSCSEYRSCLAC 842
Query: 116 LRHAHCGWC 124
L CGWC
Sbjct: 843 LSDQSCGWC 851
Score = 64 (27.6 bits), Expect = 3.6e-52, Sum P(2) = 3.6e-52
Identities = 23/86 (26%), Positives = 33/86 (38%)
Query: 44 CDQRTDCQDCLTSSGGEGGW----HECRWSSMLNE--CISPSYEALYCAGGVCGLVLGPH 97
C + C CL+ GW + C S +N+ CI P E + L+L P
Sbjct: 833 CSEYRSCLACLSDQSC--GWCPTVNLCFLRSDINQQPCIDPQGEERH-------LLLNPL 883
Query: 98 QAPQCPRSCSAYTQCSTCLRHAHCGW 123
C C Y C+ C + +C W
Sbjct: 884 H---CTL-CEEYRDCAACTQDPYCEW 905
Score = 61 (26.5 bits), Expect = 9.0e-05, Sum P(4) = 9.0e-05
Identities = 21/63 (33%), Positives = 27/63 (42%)
Query: 201 QCVDLADGFECVCGRGYNKSEEGGECV-PVCSQGCV----RGVCS-EPDKCQCDFGYVGV 254
QC++ G C C G G +C PVC C RG C+ C C G+ G
Sbjct: 1417 QCIN---GL-CECPHGLG----GPQCDRPVCPGSCGAEEGRGTCNMNLGLCVCTEGWAGS 1468
Query: 255 NCS 257
+CS
Sbjct: 1469 DCS 1471
Score = 59 (25.8 bits), Expect = 1.2e-51, Sum P(2) = 1.2e-51
Identities = 22/99 (22%), Positives = 35/99 (35%)
Query: 23 VKTDANRTNIKLKTGSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEA 82
++ +A + L SC +C Q T C C+ S + GW R + C+
Sbjct: 2045 LRCEAGQCGRLLSDEDSCSPQCFQLTQCSQCI--SRPQCGWCAGRGGNGSGRCLQGGLNG 2102
Query: 83 LYCAGGVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHC 121
+ + +C CP +CS H HC
Sbjct: 2103 V--SEALCPQWNSSWSFLHCPEE----DECSN--GHHHC 2133
Score = 57 (25.1 bits), Expect = 1.9e-51, Sum P(2) = 1.9e-51
Identities = 12/39 (30%), Positives = 15/39 (38%)
Query: 102 CPRSCSAYTQCSTCLRHAHC--GWCALQRDTTGGMGVCT 138
CP CS + +C C GW L +T CT
Sbjct: 130 CPGDCSGHGRCDVATARCQCQQGWGGLDCNTPLCSQACT 168
Score = 55 (24.4 bits), Expect = 5.2e-55, Sum P(4) = 5.2e-55
Identities = 18/53 (33%), Positives = 21/53 (39%)
Query: 85 CAGGVC----GLVLGPH-QAPQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTG 132
C G+C GL GP P CP SC A TC + + G C G
Sbjct: 1418 CINGLCECPHGLG-GPQCDRPVCPGSCGAEEGRGTC--NMNLGLCVCTEGWAG 1467
Score = 52 (23.4 bits), Expect = 3.8e-52, Sum P(3) = 3.8e-52
Identities = 22/97 (22%), Positives = 36/97 (37%)
Query: 106 CSAYTQCSTCLRHAHCGWCALQ-RD---TTGGMGVC-TXXXXXXXXXXXXXXTCDILFYQ 160
C+ S CL++ C WC + R+ T +G C + +C L +
Sbjct: 548 CAEAPSESLCLKNPECSWCEGRCREYQPTDPLVGECGSTGCLGLARFLSDCQSC--LVFS 605
Query: 161 TYPDQVIEVNNNDSFSWNYVKCPPENECL--NDHHTC 195
P+ + V+ F W C CL ++H C
Sbjct: 606 GVPNSLPRVSGE--FGW----CVQNESCLPVSEHSAC 636
Score = 50 (22.7 bits), Expect = 1.4e-33, Sum P(3) = 1.4e-33
Identities = 21/73 (28%), Positives = 29/73 (39%)
Query: 300 PRDNGECVPCSEYCNGHTGLCI--NASLASLPFSPESGGTSELAAFLDEGPTTRARCMHC 357
P D +P E CN TG C+ + AS + G T L+ PT R+ C
Sbjct: 1814 PSDPCILLPTPEACNSSTGSCVWCRGTCASSDAAERLGCTLGLSTC---SPTPRSPDQ-C 1869
Query: 358 GNHTTGPKCEDCV 370
T C +C+
Sbjct: 1870 RRLKT---CSECL 1879
Score = 49 (22.3 bits), Expect = 4.8e-52, Sum P(3) = 4.8e-52
Identities = 18/55 (32%), Positives = 21/55 (38%)
Query: 66 CRWSSMLNECISP-SYEALYCAGGVCGLVLGPHQAPQCPRSCSAYTQCSTCL-RH 118
C W C S + E L C G+ P P+ P C CS CL RH
Sbjct: 1834 CVWCR--GTCASSDAAERLGCTLGLS--TCSP--TPRSPDQCRRLKTCSECLARH 1882
Score = 47 (21.6 bits), Expect = 5.2e-55, Sum P(4) = 5.2e-55
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 58 GGEGGWHECRWSSMLNECISPSYEALYC 85
GG GG C W +++ ++P C
Sbjct: 1282 GGHGGLSHCLWVLSVSQDLAPCMPGQSC 1309
Score = 43 (20.2 bits), Expect = 5.8e-50, Sum P(2) = 5.8e-50
Identities = 25/97 (25%), Positives = 34/97 (35%)
Query: 41 PLRCDQRTDCQDCL-----TSSGG---EGGWHECRWSSMLNE--CISPSYEALY---CAG 87
P +C + C +CL T S E +C+W + E CIS S C
Sbjct: 1866 PDQCRRLKTCSECLARHPKTFSSPVQPELSTLQCKWCTNCPEGACISSSVSCTSEHDCRI 1925
Query: 88 GVCGLVLGPHQAPQCPR-SCSAYTQCSTCLRHAHCGW 123
+ L + C SC A + C C C W
Sbjct: 1926 NQREIFLSSN----CTETSCEA-SDCPKCTASGKCMW 1957
Score = 42 (19.8 bits), Expect = 5.2e-55, Sum P(4) = 5.2e-55
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 48 TDCQDCLTSSG 58
+DCQ CL SG
Sbjct: 596 SDCQSCLVFSG 606
Score = 40 (19.1 bits), Expect = 1.5e-54, Sum P(3) = 1.5e-54
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 49 DCQDCLTSSGGEGGWHE 65
DCQ L + G G W E
Sbjct: 192 DCQLGLRDNSGAGQWWE 208
>UNIPROTKB|E1BPS6 [details] [associations]
symbol:MEGF8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR015915
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027 Gene3D:2.60.120.290
InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854
PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 OMA:GHSMVFH EMBL:DAAA02047205
EMBL:DAAA02047206 EMBL:DAAA02047207 EMBL:DAAA02047208
EMBL:DAAA02047209 EMBL:DAAA02047210 IPI:IPI00999849
Ensembl:ENSBTAT00000043858 Uniprot:E1BPS6
Length = 2772
Score = 536 (193.7 bits), Expect = 5.1e-53, Sum P(2) = 5.1e-53
Identities = 92/201 (45%), Positives = 123/201 (61%)
Query: 176 SWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCV 235
SW ++ CPPE+EC N HH C+ +++ C D G+EC C GY G C PVC+QGCV
Sbjct: 2097 SWAFLSCPPEDECANGHHDCN-ETQNCHDRPHGYECSCKAGYTMDNVTGLCRPVCAQGCV 2155
Query: 236 RGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPL 295
G C EPD C+C FG+VG NCS +C+CN H+DCAG D CL CHNHTKG C++C PL
Sbjct: 2156 NGSCVEPDHCRCHFGFVGRNCSTECRCNRHSDCAGVGARDHCLLCHNHTKGSHCEQCLPL 2215
Query: 296 YVGDPRDNGECVPCSEYCNGHTGLCINAS-LASLPFSPE--SGGTSELAAFLDEGPTT-R 351
+VG G C PC +C G++ +C++ L PE S E+ + EGP+
Sbjct: 2216 FVGSAVGGGTCRPCHAFCRGNSHVCVSRKELEIARREPEKYSLDPDEIEHWATEGPSEDE 2275
Query: 352 ARCMHCGNHTTGPKCEDCVEG 372
A C++C N++ G KCE C+ G
Sbjct: 2276 AVCVNCQNNSYGDKCESCLHG 2296
Score = 254 (94.5 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 72/234 (30%), Positives = 90/234 (38%)
Query: 40 CPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVL-GPHQ 98
CP C +C CL S G +GGW C WSS L +C+SPSY L C G CG +L GP
Sbjct: 1984 CPTPCHLLPNCTSCLDSKGADGGWQHCVWSSSLQQCLSPSYLPLRCMAGGCGRLLRGPES 2043
Query: 99 APQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTXXXXXXXXXXXXXXTCDILF 158
C C+ TQC+ CLR HCGWC GG + F
Sbjct: 2044 ---CSLGCAQATQCALCLRRPHCGWCTWGGQDGGGRCLEGGLSGPRDGLTCGRPGASWAF 2100
Query: 159 YQTYPDQVIEVNNNDSFSWNYVKCPPENECLNDHH--TCDPQSEQCVDLADGFEC--VCG 214
P+ ++D C C + H C ++ +D G C VC
Sbjct: 2101 LSCPPEDECANGHHD--------CNETQNCHDRPHGYECSCKAGYTMDNVTGL-CRPVCA 2151
Query: 215 RG-YNKS-EEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQ-CNGH 265
+G N S E C C G V CS +C GV C C+ H
Sbjct: 2152 QGCVNGSCVEPDHCR--CHFGFVGRNCSTECRCNRHSDCAGVGARDHCLLCHNH 2203
Score = 214 (80.4 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 56/169 (33%), Positives = 73/169 (43%)
Query: 177 WNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVR 236
W Y +CP +EC C ++ C++ +EC C RGY + + C C + C
Sbjct: 1050 WAYARCPDVDECRLGLARCHLRAT-CLNTPLSYECHCQRGY-QGDGVTYCNRTCLEDCGH 1107
Query: 237 GVCS-EPD-KCQCDFGYVG-------------VNCSIQCQCNGHADC--AGPDKLDVCLR 279
GVCS PD C CD G+ CS C CN H+ C GP C
Sbjct: 1108 GVCSGPPDFTCVCDLGWTSDLPLPTPAPGPPAPRCSRDCGCNFHSHCHKRGPG---FCDE 1164
Query: 280 CHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGH----TGLCINAS 324
C + T G C++C P G+ +G C PC CNGH G C N S
Sbjct: 1165 CQDWTWGEHCERCRPGSFGNATGSGGCRPCQ--CNGHGDPRRGHCDNLS 1211
Score = 130 (50.8 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 33/79 (41%), Positives = 36/79 (45%)
Query: 260 CQCNGHADCA-GP-DKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHT 317
CQCNGH D G D L C +HT+G C C P Y GDPR G C C G
Sbjct: 1194 CQCNGHGDPRRGHCDNLSGLCFCQDHTEGAHCQLCSPGYYGDPRAGGSCF---RECGGRA 1250
Query: 318 GLCINASLASLPFSPESGG 336
L N S +L S GG
Sbjct: 1251 -LLTNVSSVALG-SRRFGG 1267
Score = 102 (41.0 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 28/78 (35%), Positives = 37/78 (47%)
Query: 243 DKCQ-CDFGYVGVN--CSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGD 299
DKC+ C GY ++ C+ +CQCNGHAD C C N+T+ C P D
Sbjct: 2288 DKCESCLHGYFLLDGKCT-KCQCNGHADTCNEQDGTGC-PCQNNTETGTCQGSSP---SD 2342
Query: 300 PRD--NGECVPCSEYCNG 315
RD +C C E +G
Sbjct: 2343 RRDCYKYQCAKCRESFHG 2360
Score = 73 (30.8 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 211 CVCGRGYNKSEEGGEC-VPVCSQGC-VRGVCSEP-DKCQCDFGYVGVNCSI 258
CVC G+ G +C + CS C G C+ P C+C+ G++G C +
Sbjct: 158 CVCEPGWG----GPDCSLQECSAYCGSHGTCTSPLGPCRCEPGFLGRACDL 204
Score = 64 (27.6 bits), Expect = 5.1e-53, Sum P(2) = 5.1e-53
Identities = 10/19 (52%), Positives = 10/19 (52%)
Query: 106 CSAYTQCSTCLRHAHCGWC 124
CS YT S C R C WC
Sbjct: 562 CSMYTDHSVCSRDPECSWC 580
Score = 59 (25.8 bits), Expect = 3.7e-20, Sum P(2) = 3.7e-20
Identities = 21/75 (28%), Positives = 33/75 (44%)
Query: 265 HADCAGPDKLD-VCLRCHNHTKGPQCDKC-EPLYVGDPRD-----NGECVPCSEY----C 313
H GP + + VC+ C N++ G +C+ C ++ D + NG C+E C
Sbjct: 2265 HWATEGPSEDEAVCVNCQNNSYGDKCESCLHGYFLLDGKCTKCQCNGHADTCNEQDGTGC 2324
Query: 314 ----NGHTGLCINAS 324
N TG C +S
Sbjct: 2325 PCQNNTETGTCQGSS 2339
Score = 57 (25.1 bits), Expect = 2.8e-52, Sum P(2) = 2.8e-52
Identities = 14/35 (40%), Positives = 15/35 (42%)
Query: 34 LKTGSSCPLRCDQRTDCQDCLTSSGGEGGWHECRW 68
L+ SC L C Q T C CL GW C W
Sbjct: 2038 LRGPESCSLGCAQATQCALCLRRP--HCGW--CTW 2068
Score = 55 (24.4 bits), Expect = 4.5e-52, Sum P(2) = 4.5e-52
Identities = 18/55 (32%), Positives = 20/55 (36%)
Query: 66 CRWSSMLNECISPSY-EALYCAGGVCGLVLGPHQAPQCPRSCSAYTQCSTCL-RH 118
C W C+S L C G C + PH P C CS CL RH
Sbjct: 1819 CTWCH--GACLSGDQAHRLGCGGTPCSPM--PHS----PEECRRLRTCSECLARH 1865
Score = 54 (24.1 bits), Expect = 5.7e-52, Sum P(2) = 5.7e-52
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 95 GPH-QAPQCPRSCSAYTQCSTC 115
GPH + CP +C+A+ TC
Sbjct: 1424 GPHCRMAVCPENCNAHNGAGTC 1445
Score = 52 (23.4 bits), Expect = 9.3e-52, Sum P(2) = 9.3e-52
Identities = 13/43 (30%), Positives = 17/43 (39%)
Query: 83 LYCAGGVCGLVLGPHQAPQCPRS-CSAYTQCSTCLRHAHCGWC 124
L+ +GG G+ LG A P C C + C WC
Sbjct: 1780 LFISGGFGGVALGRLLALTLPPDPCRLLPSPEACNQTGACTWC 1822
Score = 52 (23.4 bits), Expect = 9.3e-52, Sum P(2) = 9.3e-52
Identities = 15/46 (32%), Positives = 20/46 (43%)
Query: 102 CPRSCSAYTQCS---TCLRHAHCGW----CALQRDTT--GGMGVCT 138
CP C ++ QC C+ GW C+LQ + G G CT
Sbjct: 142 CPGGCRSHGQCQPPGVCV--CEPGWGGPDCSLQECSAYCGSHGTCT 185
Score = 52 (23.4 bits), Expect = 9.3e-52, Sum P(2) = 9.3e-52
Identities = 20/93 (21%), Positives = 28/93 (30%)
Query: 41 PLRCDQRTDCQDCLTS-------SGGEGGWHECRWSSMLNE--CISPSYEALYCAGGVCG 91
P C + C +CL GE C+W + E CI + + C
Sbjct: 1849 PEECRRLRTCSECLARHPRTLQPGDGEASAPRCKWCTNCPEGACIGRNGSCT--SENDCR 1906
Query: 92 LVLGP-HQAPQCPRSCSAYTQCSTCLRHAHCGW 123
+ A C + C C R C W
Sbjct: 1907 INQREVFWAGNCSEAVCGAADCEQCTREGKCMW 1939
Score = 51 (23.0 bits), Expect = 1.2e-51, Sum P(2) = 1.2e-51
Identities = 32/110 (29%), Positives = 41/110 (37%)
Query: 43 RCDQRTDC------QDCLTSSGGEG-GWHECRWSSMLNEC----IS--PSYEALYCAGGV 89
RC R C +C G +G G C + L +C S P + + G
Sbjct: 1067 RCHLRATCLNTPLSYECHCQRGYQGDGVTYCN-RTCLEDCGHGVCSGPPDFTCVCDLGWT 1125
Query: 90 CGLVLG-PHQAPQCPRSCSAYTQCSTCLRHAHC-----GWCALQRDTTGG 133
L L P P PR CS C C H+HC G+C +D T G
Sbjct: 1126 SDLPLPTPAPGPPAPR-CSR--DCG-CNFHSHCHKRGPGFCDECQDWTWG 1171
Score = 39 (18.8 bits), Expect = 2.2e-50, Sum P(2) = 2.2e-50
Identities = 5/11 (45%), Positives = 6/11 (54%)
Query: 115 CLRHAHCGWCA 125
C CGWC+
Sbjct: 837 CTPRPPCGWCS 847
>ZFIN|ZDB-GENE-090312-21 [details] [associations]
symbol:atrn "attractin" species:7955 "Danio rerio"
[GO:0016020 "membrane" evidence=IEA] [GO:0030246 "carbohydrate
binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001304
InterPro:IPR002165 InterPro:IPR015915 Pfam:PF01437 PROSITE:PS50026
PROSITE:PS50041 SMART:SM00034 SMART:SM00181 ZFIN:ZDB-GENE-090312-21
GO:GO:0016021 GO:GO:0030246 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.120.10.80 PROSITE:PS01186
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 EMBL:CR388098 EMBL:CR589874
EMBL:CT583702 IPI:IPI00806015 ProteinModelPortal:F1Q5V0
Ensembl:ENSDART00000089528 ArrayExpress:F1Q5V0 Bgee:F1Q5V0
Uniprot:F1Q5V0
Length = 1383
Score = 204 (76.9 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 66/242 (27%), Positives = 97/242 (40%)
Query: 30 TNIKLKTGSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECI-SPSYEALYCAGG 88
TN +K C C R+ C +C + S EC W S + +C+ S +Y + G
Sbjct: 871 TNHSVK---QCRTPCALRSSCSECTSGSS------ECMWCSNMRQCVDSNAYVPSF-PYG 920
Query: 89 VCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTXXXXXXXXXX 148
C + P P +CS Y C CL CGWC +T G +
Sbjct: 921 QCMEWYTMNSCP--PENCSGYKTCGHCLDQPGCGWCTDPSNTGRGQCIEGSYRGPVQTLF 978
Query: 149 XXXXTCDILFYQTYPDQVIEVNN---NDSFSWNYVKCPPENECLNDHHTCDPQS--EQCV 203
T P ++ V+ +++W++++CP +C N H +C +S E+C
Sbjct: 979 HAPSTSGPSILPA-PQPMLNVSLCPVEGNYNWSFIQCPA-CQC-NGHSSCVNESVCERCE 1035
Query: 204 DLADGFECV-CGRGY-NKSEEGGECVPVCSQGCVRGVC-SEPDKCQCDF-GYVGVNCSIQ 259
DL G +C C GY GG C P C +C S KC C G G C +
Sbjct: 1036 DLTTGKQCESCISGYYGDPTNGGSCQP-CKCNGHASMCNSNNGKCFCTTKGIKGDRCHV- 1093
Query: 260 CQ 261
C+
Sbjct: 1094 CE 1095
Score = 183 (69.5 bits), Expect = 6.0e-16, Sum P(3) = 6.0e-16
Identities = 51/154 (33%), Positives = 70/154 (45%)
Query: 182 CPPENECLNDHHTC-----DPQSEQCVDLAD-GF-ECVCG--RG------YNKSEEGGEC 226
CPPEN C + + TC P C D ++ G +C+ G RG + S G
Sbjct: 931 CPPEN-C-SGYKTCGHCLDQPGCGWCTDPSNTGRGQCIEGSYRGPVQTLFHAPSTSGPSI 988
Query: 227 VPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKG 286
+P +C P + ++ + + C CQCNGH+ C VC RC + T G
Sbjct: 989 LPAPQPMLNVSLC--P--VEGNYNWSFIQCPA-CQCNGHSSCVNES---VCERCEDLTTG 1040
Query: 287 PQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLC 320
QC+ C Y GDP + G C PC CNGH +C
Sbjct: 1041 KQCESCISGYYGDPTNGGSCQPCK--CNGHASMC 1072
Score = 99 (39.9 bits), Expect = 6.0e-16, Sum P(3) = 6.0e-16
Identities = 25/96 (26%), Positives = 39/96 (40%)
Query: 43 RCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQAPQC 102
+C+Q +DC C ++ + C+W S L C+S GG+ P P
Sbjct: 655 KCEQYSDCYSCTANT------NSCQWCSTL--CVSSHSNCTSSPGGIMEYEACPKDNPSS 706
Query: 103 PRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMG-VC 137
CS T C +C +C W ++ T G +C
Sbjct: 707 V--CSKRTSCKSCATDQNCQWETRNQECTTLPGNIC 740
Score = 60 (26.2 bits), Expect = 0.00035, Sum P(4) = 0.00035
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 354 CMHCGNHTTGPKCEDCVEG 372
C C + TTG +CE C+ G
Sbjct: 1031 CERCEDLTTGKQCESCISG 1049
Score = 54 (24.1 bits), Expect = 0.00035, Sum P(4) = 0.00035
Identities = 37/147 (25%), Positives = 53/147 (36%)
Query: 202 CVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVN-CSIQC 260
CV+ +G +C R N S + +C C+ +R CSE C G CS
Sbjct: 858 CVNSVNG--SLCERPTNHSVK--QCRTPCA---LRSSCSE-----CTSGSSECMWCSNMR 905
Query: 261 QCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYV-GDPRDNGECVPCSEYCNGHTGL 319
QC C+ + P + C G D C C++ N G
Sbjct: 906 QCVDSNAYVPSFPYGQCMEWYTMNSCPP-ENCSGYKTCGHCLDQPGCGWCTDPSNTGRGQ 964
Query: 320 CINAS----LASLPFSPESGGTSELAA 342
CI S + +L +P + G S L A
Sbjct: 965 CIEGSYRGPVQTLFHAPSTSGPSILPA 991
Score = 52 (23.4 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 83 LYCAGGVCGLVLGPHQAPQCPRSCSAYTQ---CSTCLRHAHCGW 123
+Y GG L+LG P SC+A+++ C T + C W
Sbjct: 578 MYVYGGFNSLMLGD-VLRFTPASCAAFSEHLECVTAVPGVKCVW 620
Score = 40 (19.1 bits), Expect = 6.0e-16, Sum P(3) = 6.0e-16
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 31 NIKLKTGSSCPLRCDQRTDCQ 51
NI + ++CP C R +C+
Sbjct: 193 NISYRL-NTCPNNCSDRGECR 212
>UNIPROTKB|Q8MJ16 [details] [associations]
symbol:ATRN "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0040014 "regulation of multicellular organism growth"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030246 "carbohydrate binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001304
InterPro:IPR002165 InterPro:IPR006652 InterPro:IPR015915
Pfam:PF01344 Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041
SMART:SM00034 SMART:SM00181 GO:GO:0016021 GO:GO:0005615
GO:GO:0030246 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0040014 GO:GO:0004872
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 HSSP:P02468 HOVERGEN:HBG004312
InterPro:IPR003659 SMART:SM00423 GeneTree:ENSGT00390000001118
HOGENOM:HOG000231727 CTD:8455 OMA:NPLKGTC EMBL:DAAA02036180
EMBL:DAAA02036185 EMBL:DAAA02036181 EMBL:DAAA02036182
EMBL:DAAA02036183 EMBL:DAAA02036184 EMBL:AF531101 IPI:IPI00697240
IPI:IPI01002340 RefSeq:NP_776420.1 UniGene:Bt.12296 STRING:Q8MJ16
Ensembl:ENSBTAT00000039853 GeneID:281017 KEGG:bta:281017
InParanoid:Q8MJ16 NextBio:20805109 Uniprot:Q8MJ16
Length = 1415
Score = 216 (81.1 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 66/236 (27%), Positives = 94/236 (39%)
Query: 36 TGSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLG 95
+ C C RT C +C + S EC W S + +C+ + Y A G +
Sbjct: 911 SAKQCRTPCALRTACGECTSGSS------ECMWCSNMKQCVDSN---AYVASFPFGQCME 961
Query: 96 PHQAPQCP-RSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTXXXXXXXXXXXXXXTC 154
+ CP +CS Y CS CL CGWC +T G G C
Sbjct: 962 WYTMSSCPPENCSGYCTCSHCLEQPGCGWCTDPSNT--GKGKCIEGSYKGPVKMPSQGPT 1019
Query: 155 DILFYQTYPDQVIEVNN--NDS-FSWNYVKCPPENECLNDHHTCDPQS--EQCVDLADGF 209
+YP ++ + DS ++W+++ CP +C N H C QS E+C +L G
Sbjct: 1020 G----NSYPQPLLNSSMCLEDSRYNWSFIHCPA-CQC-NGHSKCINQSICEKCENLTTGK 1073
Query: 210 EC-VCGRG-YNKSEEGGECVPVCSQGCVRGVCS-EPDKCQCDF-GYVGVNCSIQCQ 261
C C G Y GG+C P G +C+ KC C G G C + C+
Sbjct: 1074 HCETCISGFYGDPTNGGKCQPCRCNGHA-SLCNTNTGKCFCTTKGVKGDECQL-CE 1127
Score = 186 (70.5 bits), Expect = 6.4e-16, Sum P(2) = 6.4e-16
Identities = 50/147 (34%), Positives = 67/147 (45%)
Query: 182 CPPENECLNDHHTCDPQSEQ--CVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVC 239
CPPEN C + + TC EQ C D G+ S +G +P SQG
Sbjct: 968 CPPEN-C-SGYCTCSHCLEQPGCGWCTDPSNTGKGKCIEGSYKGPVKMP--SQGPTGNSY 1023
Query: 240 SEP----DKCQCD--FGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCE 293
+P C D + + ++C CQCNGH+ C +C +C N T G C+ C
Sbjct: 1024 PQPLLNSSMCLEDSRYNWSFIHCPA-CQCNGHSKCINQS---ICEKCENLTTGKHCETCI 1079
Query: 294 PLYVGDPRDNGECVPCSEYCNGHTGLC 320
+ GDP + G+C PC CNGH LC
Sbjct: 1080 SGFYGDPTNGGKCQPCR--CNGHASLC 1104
Score = 94 (38.1 bits), Expect = 6.4e-16, Sum P(2) = 6.4e-16
Identities = 22/82 (26%), Positives = 34/82 (41%)
Query: 43 RCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQAPQC 102
RCDQ TDC C ++ G C+W + + C+ ++ C G + H
Sbjct: 689 RCDQLTDCYSCTANTNG------CQWCN--DHCVPTNHS---CTEGQISIFKYDHCPKDN 737
Query: 103 PRS-CSAYTQCSTCLRHAHCGW 123
P C+ T C +C +C W
Sbjct: 738 PMYYCNKKTSCRSCALDQNCQW 759
Score = 68 (29.0 bits), Expect = 5.1e-14, Sum P(3) = 5.1e-14
Identities = 14/40 (35%), Positives = 17/40 (42%)
Query: 87 GGVCGLVLGPHQAPQCPRSCSAYTQCSTCLR-HAHCGWCA 125
G VC H A QC C+ T C C + C WC+
Sbjct: 901 GSVCERPAN-HSAKQCRTPCALRTACGECTSGSSECMWCS 939
Score = 49 (22.3 bits), Expect = 5.1e-14, Sum P(3) = 5.1e-14
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 44 CDQRTDCQDCLTSSGGEGGWHECRWSSMLNECIS 77
C+++T C+ C C+W ECI+
Sbjct: 742 CNKKTSCRSCALDQN-------CQWEPRNQECIA 768
Score = 47 (21.6 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 106 CSAYTQCSTCLRHAH-CGWC 124
C T C +C + + C WC
Sbjct: 690 CDQLTDCYSCTANTNGCQWC 709
Score = 37 (18.1 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 18/75 (24%), Positives = 28/75 (37%)
Query: 40 CPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQA 99
CP C R +C+ +S+ + E W C P +C CG PH+
Sbjct: 237 CPNNCSGRGECKISNSSNTVQCECSE-NWKG--EACDIP-----HCVNN-CGF---PHRG 284
Query: 100 ---PQCPRSCSAYTQ 111
R CS +++
Sbjct: 285 ICNSSDVRGCSCFSE 299
Score = 37 (18.1 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 5/11 (45%), Positives = 7/11 (63%)
Query: 102 CPRSCSAYTQC 112
CP +CS +C
Sbjct: 237 CPNNCSGRGEC 247
>MGI|MGI:1341628 [details] [associations]
symbol:Atrn "attractin" species:10090 "Mus musculus"
[GO:0004872 "receptor activity" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005615 "extracellular space"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0006954 "inflammatory response"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0021549 "cerebellum
development" evidence=IMP] [GO:0030246 "carbohydrate binding"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IMP] [GO:0042552 "myelination" evidence=IMP]
[GO:0043473 "pigmentation" evidence=IMP] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR006652
InterPro:IPR015915 Pfam:PF01344 Pfam:PF01437 PROSITE:PS50026
PROSITE:PS50041 SMART:SM00034 SMART:SM00181 MGI:MGI:1341628
GO:GO:0016021 GO:GO:0005886 GO:GO:0005737 GO:GO:0005615
GO:GO:0006979 GO:GO:0030246 GO:GO:0006954 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0040014
GO:GO:0004872 EMBL:CH466519 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0042552 Gene3D:2.120.10.80 GO:GO:0021549 PROSITE:PS01186
EMBL:AL833771 InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431
SMART:SM00042 SUPFAM:SSF49854 PROSITE:PS01180 GO:GO:0043473
eggNOG:NOG242225 HOVERGEN:HBG004312 InterPro:IPR003659
SMART:SM00423 GeneTree:ENSGT00390000001118 HOGENOM:HOG000231727
CTD:8455 OMA:NPLKGTC OrthoDB:EOG4R23SZ EMBL:AF116897 EMBL:AF119821
EMBL:AH007542 IPI:IPI00224752 RefSeq:NP_033860.2 UniGene:Mm.119936
ProteinModelPortal:Q9WU60 SMR:Q9WU60 STRING:Q9WU60
PhosphoSite:Q9WU60 PaxDb:Q9WU60 PRIDE:Q9WU60
Ensembl:ENSMUST00000028781 GeneID:11990 KEGG:mmu:11990
InParanoid:A2AP43 NextBio:280155 Bgee:Q9WU60 CleanEx:MM_ATRN
Genevestigator:Q9WU60 GermOnline:ENSMUSG00000027312 Uniprot:Q9WU60
Length = 1428
Score = 229 (85.7 bits), Expect = 7.4e-16, P = 7.4e-16
Identities = 68/236 (28%), Positives = 95/236 (40%)
Query: 36 TGSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLG 95
+ C C RT C +C +SS EC W S + +C+ + Y A G +
Sbjct: 924 SAKQCRTPCALRTACGECTSSSS------ECMWCSNMKQCVDSN---AYVASFPFGQCME 974
Query: 96 PHQAPQCP-RSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTXXXXXXXXXXXXXXTC 154
+ CP +CS Y CS CL CGWC +T G G C +
Sbjct: 975 WYTMSSCPPENCSGYCTCSHCLEQPGCGWCTDPSNT--GKGKCIEGSYKGPVKMPSQASA 1032
Query: 155 DILFYQTYPDQVIEVNN--NDS-FSWNYVKCPPENECLNDHHTCDPQS--EQCVDLADGF 209
YP ++ + DS ++W+++ CP +C N H C QS E+C DL G
Sbjct: 1033 G----NVYPQPLLNSSMCLEDSRYNWSFIHCPA-CQC-NGHSKCINQSICEKCEDLTTGK 1086
Query: 210 EC-VCGRG-YNKSEEGGECVPVCSQGCVRGVCS-EPDKCQCDF-GYVGVNCSIQCQ 261
C C G Y GG+C P C +C+ KC C G G C + C+
Sbjct: 1087 HCETCISGFYGDPTNGGKCQP-CKCNGHASLCNTNTGKCFCTTKGVKGDECQL-CE 1140
Score = 184 (69.8 bits), Expect = 6.0e-15, Sum P(2) = 6.0e-15
Identities = 49/147 (33%), Positives = 67/147 (45%)
Query: 182 CPPENECLNDHHTCDPQSEQ--CVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVC 239
CPPEN C + + TC EQ C D G+ S +G +P SQ V
Sbjct: 981 CPPEN-C-SGYCTCSHCLEQPGCGWCTDPSNTGKGKCIEGSYKGPVKMP--SQASAGNVY 1036
Query: 240 SEP----DKCQCD--FGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCE 293
+P C D + + ++C CQCNGH+ C +C +C + T G C+ C
Sbjct: 1037 PQPLLNSSMCLEDSRYNWSFIHCPA-CQCNGHSKCINQS---ICEKCEDLTTGKHCETCI 1092
Query: 294 PLYVGDPRDNGECVPCSEYCNGHTGLC 320
+ GDP + G+C PC CNGH LC
Sbjct: 1093 SGFYGDPTNGGKCQPCK--CNGHASLC 1117
Score = 87 (35.7 bits), Expect = 6.0e-15, Sum P(2) = 6.0e-15
Identities = 21/86 (24%), Positives = 36/86 (41%)
Query: 43 RCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQAPQC 102
RCDQ TDC C ++ ++C W + + C+ ++ C G + + C
Sbjct: 702 RCDQHTDCYSCTANT------NDCHWCN--DHCVPVNHS---CTEGQISIA----KYESC 746
Query: 103 PRS-----CSAYTQCSTCLRHAHCGW 123
P+ C+ T C +C +C W
Sbjct: 747 PKDNPMYYCNKKTSCRSCALDQNCQW 772
Score = 68 (29.0 bits), Expect = 7.2e-14, Sum P(3) = 7.2e-14
Identities = 14/40 (35%), Positives = 17/40 (42%)
Query: 87 GGVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHA-HCGWCA 125
G VC H A QC C+ T C C + C WC+
Sbjct: 914 GSVCERPAN-HSAKQCRTPCALRTACGECTSSSSECMWCS 952
Score = 50 (22.7 bits), Expect = 7.2e-14, Sum P(3) = 7.2e-14
Identities = 13/51 (25%), Positives = 20/51 (39%)
Query: 32 IKLKTGSSCP-----LRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECIS 77
I + SCP C+++T C+ C C+W ECI+
Sbjct: 738 ISIAKYESCPKDNPMYYCNKKTSCRSCALDQN-------CQWEPRNQECIA 781
Score = 50 (22.7 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 19/70 (27%), Positives = 25/70 (35%)
Query: 40 CPLRCDQRTDCQDCLTSSGGE----GGW--HECRWSSMLNECISPSYEALYCAGGVCGLV 93
CP C R +C+ +SS E W C + C P + + A G
Sbjct: 249 CPNNCSGRGECKSSNSSSAVECECSENWKGESCDIPHCTDNCGFP-HRGICNASDTRGCS 307
Query: 94 LGPH-QAPQC 102
PH Q P C
Sbjct: 308 CFPHWQGPGC 317
Score = 38 (18.4 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 5/13 (38%), Positives = 8/13 (61%)
Query: 102 CPRSCSAYTQCST 114
CP +CS +C +
Sbjct: 249 CPNNCSGRGECKS 261
>RGD|69063 [details] [associations]
symbol:Atrn "attractin" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0004872 "receptor
activity" evidence=IEA;ISO] [GO:0005615 "extracellular space"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006954 "inflammatory response"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IMP] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0021549 "cerebellum development" evidence=ISO] [GO:0030246
"carbohydrate binding" evidence=IEA] [GO:0040014 "regulation of
multicellular organism growth" evidence=IEA;ISO] [GO:0042552
"myelination" evidence=ISO] [GO:0043473 "pigmentation" evidence=ISO]
InterPro:IPR000742 InterPro:IPR001304 InterPro:IPR002165
InterPro:IPR006652 InterPro:IPR015915 Pfam:PF01344 Pfam:PF01437
PROSITE:PS50026 PROSITE:PS50041 SMART:SM00034 SMART:SM00181
RGD:69063 GO:GO:0016021 GO:GO:0005886 GO:GO:0005737 GO:GO:0005615
GO:GO:0006979 GO:GO:0030246 GO:GO:0006954 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436
PROSITE:PS00615 GO:GO:0040014 GO:GO:0004872 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.120.10.80 PROSITE:PS01186
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 eggNOG:NOG242225 HOVERGEN:HBG004312
InterPro:IPR003659 SMART:SM00423 GeneTree:ENSGT00390000001118
HOGENOM:HOG000231727 CTD:8455 OrthoDB:EOG4R23SZ EMBL:AB038387
EMBL:AB038388 EMBL:AB049248 IPI:IPI00194733 IPI:IPI00553894
RefSeq:NP_112641.1 UniGene:Rn.53846 ProteinModelPortal:Q99J86
STRING:Q99J86 PhosphoSite:Q99J86 PRIDE:Q99J86
Ensembl:ENSRNOT00000028847 GeneID:83526 KEGG:rno:83526
UCSC:RGD:69063 InParanoid:Q99J86 NextBio:616013
Genevestigator:Q99J86 Uniprot:Q99J86
Length = 1432
Score = 229 (85.7 bits), Expect = 7.4e-16, P = 7.4e-16
Identities = 68/236 (28%), Positives = 95/236 (40%)
Query: 36 TGSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLG 95
+ C C RT C +C +SS EC W S + +C+ + Y A G +
Sbjct: 928 SAKQCRTPCALRTACGECTSSSS------ECMWCSNMKQCVDSN---AYVASFPFGQCME 978
Query: 96 PHQAPQCP-RSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTXXXXXXXXXXXXXXTC 154
+ CP +CS Y CS CL CGWC +T G G C +
Sbjct: 979 WYTMSSCPPENCSGYCTCSHCLEQPGCGWCTDPSNT--GKGKCIEGSYKGPVKMPSHAST 1036
Query: 155 DILFYQTYPDQVIEVNN--NDS-FSWNYVKCPPENECLNDHHTCDPQS--EQCVDLADGF 209
YP ++ + DS ++W+++ CP +C N H C QS E+C DL G
Sbjct: 1037 G----NVYPQPLLNSSMCLEDSRYNWSFIHCPA-CQC-NGHSKCINQSICEKCEDLTTGK 1090
Query: 210 EC-VCGRG-YNKSEEGGECVPVCSQGCVRGVCS-EPDKCQCDF-GYVGVNCSIQCQ 261
C C G Y GG+C P C +C+ KC C G G C + C+
Sbjct: 1091 HCETCISGFYGDPTNGGKCQP-CKCNGHASLCNTNTGKCFCTTKGVKGEECQL-CE 1144
Score = 179 (68.1 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 49/149 (32%), Positives = 69/149 (46%)
Query: 182 CPPENECLNDHHTCDPQSEQ-----CVDLAD-GF-ECVCG--RGYNKSEEGGECVPVCSQ 232
CPPEN C + + TC EQ C D ++ G +C+ G +G K V Q
Sbjct: 985 CPPEN-C-SGYCTCSHCLEQPGCGWCTDPSNTGKGKCIEGSYKGPVKMPSHASTGNVYPQ 1042
Query: 233 GCVRG-VCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDK 291
+ +C E + F ++C CQCNGH+ C +C +C + T G C+
Sbjct: 1043 PLLNSSMCLEDSRYNWSF----IHCPA-CQCNGHSKCINQS---ICEKCEDLTTGKHCET 1094
Query: 292 CEPLYVGDPRDNGECVPCSEYCNGHTGLC 320
C + GDP + G+C PC CNGH LC
Sbjct: 1095 CISGFYGDPTNGGKCQPCK--CNGHASLC 1121
Score = 87 (35.7 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 21/86 (24%), Positives = 36/86 (41%)
Query: 43 RCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQAPQC 102
RCDQ TDC C ++ ++C W + + C+ ++ C G + + C
Sbjct: 706 RCDQHTDCYSCTANT------NDCHWCN--DHCVPVNHS---CTEGQISIA----KYDNC 750
Query: 103 PRS-----CSAYTQCSTCLRHAHCGW 123
P+ C+ T C +C +C W
Sbjct: 751 PKDNPMYYCNKKTSCRSCALDQNCQW 776
Score = 68 (29.0 bits), Expect = 3.6e-13, Sum P(3) = 3.6e-13
Identities = 14/40 (35%), Positives = 17/40 (42%)
Query: 87 GGVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHA-HCGWCA 125
G VC H A QC C+ T C C + C WC+
Sbjct: 918 GSVCERPAN-HSAKQCRTPCALRTACGECTSSSSECMWCS 956
Score = 49 (22.3 bits), Expect = 3.6e-13, Sum P(3) = 3.6e-13
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 44 CDQRTDCQDCLTSSGGEGGWHECRWSSMLNECIS 77
C+++T C+ C C+W ECI+
Sbjct: 759 CNKKTSCRSCALDQN-------CQWEPRNQECIA 785
Score = 48 (22.0 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 19/70 (27%), Positives = 25/70 (35%)
Query: 40 CPLRCDQRTDCQDCLTSSGGE----GGW--HECRWSSMLNECISPSYEALYCAGGVCGLV 93
CP C R +C+ +SS E W C + C P + + A G
Sbjct: 253 CPNNCSGRGECKSSNSSSTVECECSENWKGESCDIPHCTDNCGFP-HRGICNASDTRGCS 311
Query: 94 LGPH-QAPQC 102
PH Q P C
Sbjct: 312 CFPHWQGPGC 321
Score = 38 (18.4 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 5/13 (38%), Positives = 8/13 (61%)
Query: 102 CPRSCSAYTQCST 114
CP +CS +C +
Sbjct: 253 CPNNCSGRGECKS 265
>UNIPROTKB|F1MXV1 [details] [associations]
symbol:ATRNL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030246 "carbohydrate binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR015915
Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041 SMART:SM00034
SMART:SM00181 GO:GO:0016021 GO:GO:0030246 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0007186
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 OMA:YTQQKVS InterPro:IPR013111
InterPro:IPR003659 Pfam:PF07974 SMART:SM00423
GeneTree:ENSGT00390000001118 EMBL:DAAA02059311 EMBL:DAAA02059312
EMBL:DAAA02059313 EMBL:DAAA02059314 EMBL:DAAA02059315
EMBL:DAAA02059316 EMBL:DAAA02059317 EMBL:DAAA02059318
EMBL:DAAA02059319 EMBL:DAAA02059320 EMBL:DAAA02059321
IPI:IPI00699369 Ensembl:ENSBTAT00000023559 Uniprot:F1MXV1
Length = 1180
Score = 199 (75.1 bits), Expect = 9.5e-16, Sum P(2) = 9.5e-16
Identities = 51/157 (32%), Positives = 75/157 (47%)
Query: 179 YVKCPPENECLN-DHHTCDPQSEQCVDLADGFECV----CGRGYNKSEEG-GECVPVCSQ 232
Y+ P +CL TC PQ+ C L +C+ CG + S G G C+ S+
Sbjct: 879 YIISFPYGQCLEWQTATCSPQN--CSGLRTCGQCLEQPGCGWCNDPSNTGRGHCIEGSSR 936
Query: 233 GCVR--GVCSEP---DKCQC----DFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNH 283
G ++ G+ + D C ++ + + C CQCNGH+ C + VC +C N
Sbjct: 937 GPMKLVGMLNNEMLLDTSLCPKEKNYEWSFIQCPA-CQCNGHSTCINNN---VCEQCKNL 992
Query: 284 TKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLC 320
T G QC C P Y GDP + G+C C+ C+GH +C
Sbjct: 993 TTGKQCQDCMPGYYGDPTNGGQCTACT--CSGHANIC 1027
Score = 197 (74.4 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 64/228 (28%), Positives = 89/228 (39%)
Query: 40 CPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQA 99
C C RT C +C TS+G EC W S C+ + + G C L A
Sbjct: 844 CKKPCSLRTSCSNC-TSNG-----MECMWCSSTKRCVDSNAYIISFPYGQC---LEWQTA 894
Query: 100 PQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTXXXXXXXXXXXXXXTCDILFY 159
P++CS C CL CGWC +T G G C ++L
Sbjct: 895 TCSPQNCSGLRTCGQCLEQPGCGWCNDPSNT--GRGHCIEGSSRGPMKLVGMLNNEMLLD 952
Query: 160 QTYPDQVIEVNNNDSFSWNYVKCPPENECLNDHHTCDPQS--EQCVDLADGFECV-CGRG 216
+ + E N + W++++CP +C N H TC + EQC +L G +C C G
Sbjct: 953 TSLCPK--EKN----YEWSFIQCPA-CQC-NGHSTCINNNVCEQCKNLTTGKQCQDCMPG 1004
Query: 217 Y-NKSEEGGECVPVCSQGCVRGVCS-EPDKCQCDF-GYVGVNCSIQCQ 261
Y GG+C C+ +C KC C G G C C+
Sbjct: 1005 YYGDPTNGGQCT-ACTCSGHANICHMHTGKCFCTTKGIKGDQCQF-CK 1050
Score = 76 (31.8 bits), Expect = 9.5e-16, Sum P(2) = 9.5e-16
Identities = 26/101 (25%), Positives = 41/101 (40%)
Query: 29 RTNIKLKTGSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGG 88
R LKT +S RC + DC C ++ G C+W +CIS + C+
Sbjct: 611 RAKCPLKTAASDD-RCYRYADCASCTANTNG------CQWCDD-KKCISSTSN---CSMS 659
Query: 89 VCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHCGWCALQRD 129
V + Q C+ T C +C + +C W Q++
Sbjct: 660 VKNYTKCHVRNEQI---CNKLTSCKSCSLNLNCQWDQRQQE 697
Score = 75 (31.5 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 87 GGVCGL-VLGPHQ-APQCPRSCSAYTQCSTCLRHA-HCGWCA 125
G VC V+ P+Q A C + CS T CS C + C WC+
Sbjct: 827 GLVCEKPVVSPNQNARPCKKPCSLRTSCSNCTSNGMECMWCS 868
Score = 49 (22.3 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 7/23 (30%), Positives = 15/23 (65%)
Query: 102 CPRSCSAYTQCSTCLRHAHCGWC 124
CP +CS + +C+T + ++ +C
Sbjct: 169 CPNNCSGHGKCTTSVSVSNQVYC 191
>UNIPROTKB|E1BYK5 [details] [associations]
symbol:ATRNL1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0030246 "carbohydrate binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001304 InterPro:IPR002165
InterPro:IPR015915 Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041
SMART:SM00034 SMART:SM00181 GO:GO:0016021 GO:GO:0030246
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 GO:GO:0007186 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 Gene3D:2.60.120.290
InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854
PROSITE:PS01180 OMA:YTQQKVS InterPro:IPR013111 InterPro:IPR003659
Pfam:PF07974 SMART:SM00423 GeneTree:ENSGT00390000001118
EMBL:AADN02030934 IPI:IPI00585255 ProteinModelPortal:E1BYK5
Ensembl:ENSGALT00000014903 Uniprot:E1BYK5
Length = 1242
Score = 205 (77.2 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 61/225 (27%), Positives = 89/225 (39%)
Query: 40 CPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQA 99
C C RT C +C TS+G EC W S C+ + + G C L A
Sbjct: 889 CKKPCSLRTSCSNC-TSNG-----MECMWCSSTKRCVDSNAYIISFPYGQC---LEWQTA 939
Query: 100 PQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTXXXXXXXXXXXXXXTCDILFY 159
P++CS C CL CGWC +T G G C + +++
Sbjct: 940 TCSPQNCSGLRTCGQCLEQPGCGWCNDPSNT--GKGQCLEGSSRGPMKPVGMHSAEMVLD 997
Query: 160 QTYPDQVIEVNNNDSFSWNYVKCPPENECLNDHHTCDPQS--EQCVDLADGFEC-VCGRG 216
T + S+ W++++CP +C N H TC + +QC +L G +C C G
Sbjct: 998 ATLCPK------EKSYEWSFIQCPA-CQC-NGHSTCINSNVCDQCKNLTTGKQCETCMPG 1049
Query: 217 Y-NKSEEGGECVPVCSQGCVRGVCS-EPDKCQCDF-GYVGVNCSI 258
Y GG+C C+ +C + KC C G G C +
Sbjct: 1050 YYGDPTNGGQCT-ACTCSGHANICHMQTGKCFCTTKGIKGDQCQL 1093
Score = 200 (75.5 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 52/157 (33%), Positives = 76/157 (48%)
Query: 179 YVKCPPENECLN-DHHTCDPQSEQCVDLADGFECV----CGRGYNKSEEG-GECVPVCSQ 232
Y+ P +CL TC PQ+ C L +C+ CG + S G G+C+ S+
Sbjct: 924 YIISFPYGQCLEWQTATCSPQN--CSGLRTCGQCLEQPGCGWCNDPSNTGKGQCLEGSSR 981
Query: 233 GCVR--GVCSEP---DKCQC----DFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNH 283
G ++ G+ S D C + + + C CQCNGH+ C + VC +C N
Sbjct: 982 GPMKPVGMHSAEMVLDATLCPKEKSYEWSFIQCPA-CQCNGHSTCINSN---VCDQCKNL 1037
Query: 284 TKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLC 320
T G QC+ C P Y GDP + G+C C+ C+GH +C
Sbjct: 1038 TTGKQCETCMPGYYGDPTNGGQCTACT--CSGHANIC 1072
Score = 75 (31.5 bits), Expect = 2.1e-15, Sum P(3) = 2.1e-15
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 87 GGVCGL-VLGPHQ-APQCPRSCSAYTQCSTCLRHA-HCGWCA 125
G VC V+ P+Q A C + CS T CS C + C WC+
Sbjct: 872 GLVCEKPVVSPNQNARPCKKPCSLRTSCSNCTSNGMECMWCS 913
Score = 74 (31.1 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 22/87 (25%), Positives = 35/87 (40%)
Query: 43 RCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQAPQC 102
RC + DC C ++ G C+W +CIS + C+ V + Q
Sbjct: 669 RCYRYADCASCTANTNG------CQWCDD-KKCISANSN---CSMSVKNYTKCHVRNEQI 718
Query: 103 PRSCSAYTQCSTCLRHAHCGWCALQRD 129
C+ T C +C H +C W Q++
Sbjct: 719 ---CNKLTSCKSCSLHLNCQWDQRQQE 742
Score = 48 (22.0 bits), Expect = 6.6e-13, Sum P(2) = 6.6e-13
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 102 CPRSCSAYTQCSTCL 116
CP +CS + +C+T L
Sbjct: 214 CPNNCSEHGKCTTSL 228
Score = 37 (18.1 bits), Expect = 2.1e-15, Sum P(3) = 2.1e-15
Identities = 6/18 (33%), Positives = 9/18 (50%)
Query: 38 SSCPLRCDQRTDCQDCLT 55
+SCP C + C L+
Sbjct: 212 NSCPNNCSEHGKCTTSLS 229
>UNIPROTKB|I3LUK3 [details] [associations]
symbol:ATRNL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030246 "carbohydrate binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR015915
Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041 SMART:SM00034
SMART:SM00181 GO:GO:0016021 GO:GO:0030246 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0007186
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 OMA:YTQQKVS InterPro:IPR003659
SMART:SM00423 GeneTree:ENSGT00390000001118 EMBL:CU468352
EMBL:CU915583 EMBL:FP476124 Ensembl:ENSSSCT00000032203
Uniprot:I3LUK3
Length = 1092
Score = 197 (74.4 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 51/157 (32%), Positives = 75/157 (47%)
Query: 179 YVKCPPENECLN-DHHTCDPQSEQCVDLADGFECV----CGRGYNKSEEG-GECVPVCSQ 232
Y+ P +CL TC PQ+ C L +C+ CG + S G G C+ S+
Sbjct: 924 YIISFPYGQCLEWQTATCSPQN--CSGLRTCGQCLEQPGCGWCNDPSNTGRGHCIEGSSR 981
Query: 233 GCVR--GVCSEP---DKCQC----DFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNH 283
G ++ G+ + D C ++ + + C CQCNGH+ C + VC +C N
Sbjct: 982 GPMKLVGMHNNEMALDTSLCPKEKNYEWSFIQCPA-CQCNGHSTCINNN---VCEQCKNL 1037
Query: 284 TKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLC 320
T G QC C P Y GDP + G+C C+ C+GH +C
Sbjct: 1038 TTGKQCQDCMPGYYGDPTNGGQCTACT--CSGHANIC 1072
Score = 191 (72.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 62/223 (27%), Positives = 86/223 (38%)
Query: 40 CPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQA 99
C C RT C +C TS+G EC W S C+ + + G C L A
Sbjct: 889 CKKPCSLRTSCSNC-TSNG-----MECMWCSSTKRCVDSNAYIISFPYGQC---LEWQTA 939
Query: 100 PQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTXXXXXXXXXXXXXXTCDILFY 159
P++CS C CL CGWC +T G G C ++
Sbjct: 940 TCSPQNCSGLRTCGQCLEQPGCGWCNDPSNT--GRGHCIEGSSRGPMKLVGMHNNEMALD 997
Query: 160 QTYPDQVIEVNNNDSFSWNYVKCPPENECLNDHHTCDPQS--EQCVDLADGFECV-CGRG 216
+ + E N + W++++CP +C N H TC + EQC +L G +C C G
Sbjct: 998 TSLCPK--EKN----YEWSFIQCPA-CQC-NGHSTCINNNVCEQCKNLTTGKQCQDCMPG 1049
Query: 217 Y-NKSEEGGECVPVCSQGCVRGVCS-EPDKCQCDF-GYVGVNC 256
Y GG+C C+ +C KC C G G C
Sbjct: 1050 YYGDPTNGGQCT-ACTCSGHANICHMHTGKCFCTTKGIKGDQC 1091
Score = 76 (31.8 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 26/101 (25%), Positives = 41/101 (40%)
Query: 29 RTNIKLKTGSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGG 88
R LKT +S RC + DC C ++ G C+W +CIS + C+
Sbjct: 656 RAKCPLKTAASDD-RCYRYADCASCTANTNG------CQWCDD-KKCISSNSN---CSMS 704
Query: 89 VCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHCGWCALQRD 129
V + Q C+ T C +C + +C W Q++
Sbjct: 705 VKNYTKCHVRNEQI---CNKLTSCKSCSLNLNCQWDQRQQE 742
Score = 75 (31.5 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 87 GGVCGL-VLGPHQ-APQCPRSCSAYTQCSTCLRHA-HCGWCA 125
G VC V+ P+Q A C + CS T CS C + C WC+
Sbjct: 872 GLVCEKPVVSPNQNARPCKKPCSLRTSCSNCTSNGMECMWCS 913
Score = 47 (21.6 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 102 CPRSCSAYTQCSTCL 116
CP +CS + +C+T +
Sbjct: 212 CPNNCSGHGKCTTSI 226
>UNIPROTKB|E2R6C0 [details] [associations]
symbol:ATRNL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030246 "carbohydrate binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001304 InterPro:IPR002165
InterPro:IPR015915 Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041
SMART:SM00034 SMART:SM00181 GO:GO:0016021 GO:GO:0030246
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 GO:GO:0007186 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431
SMART:SM00042 SUPFAM:SSF49854 PROSITE:PS01180 CTD:26033 OMA:YTQQKVS
InterPro:IPR013111 InterPro:IPR003659 Pfam:PF07974 SMART:SM00423
GeneTree:ENSGT00390000001118 EMBL:AAEX03015548 EMBL:AAEX03015549
EMBL:AAEX03015550 EMBL:AAEX03015551 EMBL:AAEX03015552
RefSeq:XP_544031.3 Ensembl:ENSCAFT00000018678 GeneID:486901
KEGG:cfa:486901 NextBio:20860606 Uniprot:E2R6C0
Length = 1381
Score = 195 (73.7 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 51/157 (32%), Positives = 74/157 (47%)
Query: 179 YVKCPPENECLN-DHHTCDPQSEQCVDLADGFECV----CGRGYNKSEEG-GECVPVCSQ 232
Y+ P +CL TC PQ+ C L C+ CG + S G G C+ S+
Sbjct: 922 YIISFPYGQCLEWQTATCSPQN--CSGLRTCGHCLEQPGCGWCNDPSNTGRGHCIEGSSR 979
Query: 233 GCVR--GVCSEP---DKCQC----DFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNH 283
G ++ G+ + D C ++ + + C CQCNGH+ C + VC +C N
Sbjct: 980 GPMKLVGMHNNEMVLDTSLCPKEKNYEWSFIQCPA-CQCNGHSTCINNN---VCEQCKNL 1035
Query: 284 TKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLC 320
T G QC C P Y GDP + G+C C+ C+GH +C
Sbjct: 1036 TTGKQCQDCMPGYYGDPTNGGQCTACT--CSGHANIC 1070
Score = 194 (73.4 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 62/225 (27%), Positives = 88/225 (39%)
Query: 40 CPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQA 99
C C RT C +C TS+G EC W S C+ + + G C L A
Sbjct: 887 CKKPCSLRTSCSNC-TSNG-----MECMWCSSTRRCVDSNAYIISFPYGQC---LEWQTA 937
Query: 100 PQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTXXXXXXXXXXXXXXTCDILFY 159
P++CS C CL CGWC +T G G C +++
Sbjct: 938 TCSPQNCSGLRTCGHCLEQPGCGWCNDPSNT--GRGHCIEGSSRGPMKLVGMHNNEMVLD 995
Query: 160 QTYPDQVIEVNNNDSFSWNYVKCPPENECLNDHHTCDPQS--EQCVDLADGFECV-CGRG 216
+ + E N + W++++CP +C N H TC + EQC +L G +C C G
Sbjct: 996 TSLCPK--EKN----YEWSFIQCPA-CQC-NGHSTCINNNVCEQCKNLTTGKQCQDCMPG 1047
Query: 217 Y-NKSEEGGECVPVCSQGCVRGVCS-EPDKCQCDF-GYVGVNCSI 258
Y GG+C C+ +C KC C G G C +
Sbjct: 1048 YYGDPTNGGQCT-ACTCSGHANICHMHTGKCFCTTKGIKGDQCQL 1091
Score = 77 (32.2 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 18/45 (40%), Positives = 23/45 (51%)
Query: 87 GGVCGL-VLGPHQ-APQCPRSCSAYTQCSTCLRHA-HCGWCALQR 128
G VC V+ P+Q A C + CS T CS C + C WC+ R
Sbjct: 870 GLVCEKPVVSPNQNARPCKKPCSLRTSCSNCTSNGMECMWCSSTR 914
Score = 67 (28.6 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 21/87 (24%), Positives = 35/87 (40%)
Query: 43 RCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQAPQC 102
RC + DC C ++ G C+W +CIS + C+ V + Q
Sbjct: 667 RCYRYADCASCAANTNG------CQWCDD-KKCISANSN---CSVSVKNYTKCHVRNEQI 716
Query: 103 PRSCSAYTQCSTCLRHAHCGWCALQRD 129
C+ T C +C + +C W Q++
Sbjct: 717 ---CNKLTSCKSCSLNLNCQWDQRQQE 740
Score = 47 (21.6 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 102 CPRSCSAYTQCSTCL 116
CP +CS + +C+T +
Sbjct: 212 CPNNCSGHGKCTTSI 226
>UNIPROTKB|F1Q117 [details] [associations]
symbol:ATRN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030246 "carbohydrate binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR006652
InterPro:IPR015915 Pfam:PF01344 Pfam:PF01437 PROSITE:PS50026
PROSITE:PS50041 SMART:SM00034 SMART:SM00181 GO:GO:0016021
GO:GO:0030246 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.120.10.80 InterPro:IPR002049 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 Gene3D:2.60.120.290
InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854
PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 CTD:8455 OMA:NPLKGTC EMBL:AAEX03013830
EMBL:AAEX03013831 RefSeq:XP_534360.2 Ensembl:ENSCAFT00000010258
GeneID:477170 KEGG:cfa:477170 Uniprot:F1Q117
Length = 1417
Score = 218 (81.8 bits), Expect = 9.2e-14, Sum P(2) = 9.2e-14
Identities = 66/236 (27%), Positives = 93/236 (39%)
Query: 36 TGSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLG 95
+ C C RT C +C + S EC W S + +C+ + Y A G +
Sbjct: 913 SAKQCRTPCALRTACGECTSGSS------ECMWCSNMKQCVDSN---AYVASFPFGQCME 963
Query: 96 PHQAPQCP-RSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTXXXXXXXXXXXXXXTC 154
+ CP +CS Y CS CL CGWC +T G G C
Sbjct: 964 WYTMSSCPPENCSGYCTCSHCLEQPGCGWCTDPSNT--GKGKCIEGSYKGPVKMPSQAPA 1021
Query: 155 DILFYQTYPDQVIEVNN--NDS-FSWNYVKCPPENECLNDHHTCDPQS--EQCVDLADGF 209
+YP ++ + DS ++W+++ CP +C N H C QS E+C +L G
Sbjct: 1022 G----NSYPQPLLNSSMCLEDSRYNWSFIHCPA-CQC-NGHSKCINQSICEKCENLTTGK 1075
Query: 210 EC-VCGRG-YNKSEEGGECVPVCSQGCVRGVCS-EPDKCQCDF-GYVGVNCSIQCQ 261
C C G Y GG C P C +C+ KC C G G C + C+
Sbjct: 1076 HCETCISGFYGDPTNGGRCQP-CKCNGHASLCNTNTGKCFCTTKGVKGDECQL-CE 1129
Score = 180 (68.4 bits), Expect = 5.1e-15, Sum P(2) = 5.1e-15
Identities = 49/147 (33%), Positives = 65/147 (44%)
Query: 182 CPPENECLNDHHTCDPQSEQ--CVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVC 239
CPPEN C + + TC EQ C D G+ S +G +P SQ
Sbjct: 970 CPPEN-C-SGYCTCSHCLEQPGCGWCTDPSNTGKGKCIEGSYKGPVKMP--SQAPAGNSY 1025
Query: 240 SEP----DKCQCD--FGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCE 293
+P C D + + ++C CQCNGH+ C +C +C N T G C+ C
Sbjct: 1026 PQPLLNSSMCLEDSRYNWSFIHCPA-CQCNGHSKCINQS---ICEKCENLTTGKHCETCI 1081
Query: 294 PLYVGDPRDNGECVPCSEYCNGHTGLC 320
+ GDP + G C PC CNGH LC
Sbjct: 1082 SGFYGDPTNGGRCQPCK--CNGHASLC 1106
Score = 92 (37.4 bits), Expect = 5.1e-15, Sum P(2) = 5.1e-15
Identities = 27/107 (25%), Positives = 44/107 (41%)
Query: 25 TDANRTNIKLKTGSSCPL---RCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYE 81
T+A +K + S L RCDQ TDC C ++ ++C W S + C+ ++
Sbjct: 670 TEAQEEKLKSECFSKRTLDHDRCDQHTDCYSCTANT------NDCHWCS--DHCVPVNHS 721
Query: 82 ALYCAGGVCGLVLGPHQAPQCPRS-----CSAYTQCSTCLRHAHCGW 123
C G + + CP+ C+ T C +C +C W
Sbjct: 722 ---CTEGQISI----SRYENCPKDNPMYYCNKKTSCRSCALDQNCQW 761
Score = 68 (29.0 bits), Expect = 2.6e-13, Sum P(3) = 2.6e-13
Identities = 14/40 (35%), Positives = 17/40 (42%)
Query: 87 GGVCGLVLGPHQAPQCPRSCSAYTQCSTCLR-HAHCGWCA 125
G VC H A QC C+ T C C + C WC+
Sbjct: 903 GSVCERPAN-HSAKQCRTPCALRTACGECTSGSSECMWCS 941
Score = 51 (23.0 bits), Expect = 2.3e-10, Sum P(3) = 2.3e-10
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 106 CSAYTQCSTCLRHAH-CGWCA 125
C +T C +C + + C WC+
Sbjct: 692 CDQHTDCYSCTANTNDCHWCS 712
Score = 49 (22.3 bits), Expect = 2.6e-13, Sum P(3) = 2.6e-13
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 44 CDQRTDCQDCLTSSGGEGGWHECRWSSMLNECIS 77
C+++T C+ C C+W ECI+
Sbjct: 744 CNKKTSCRSCALDQN-------CQWEPRNQECIA 770
Score = 38 (18.4 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 5/13 (38%), Positives = 8/13 (61%)
Query: 102 CPRSCSAYTQCST 114
CP +CS +C +
Sbjct: 238 CPNNCSGRGECKS 250
Score = 37 (18.1 bits), Expect = 9.2e-14, Sum P(2) = 9.2e-14
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 40 CPLRCDQRTDCQDCLTSS 57
CP C R +C+ +S+
Sbjct: 238 CPNNCSGRGECKSSNSSN 255
>UNIPROTKB|Q5VV63 [details] [associations]
symbol:ATRNL1 "Attractin-like protein 1" species:9606 "Homo
sapiens" [GO:0030246 "carbohydrate binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001304 InterPro:IPR002165
InterPro:IPR015915 Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041
SMART:SM00034 SMART:SM00181 GO:GO:0016021 GO:GO:0030246
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 PROSITE:PS00615 GO:GO:0007186 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.120.10.80 PROSITE:PS01186
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 EMBL:AY442317 EMBL:AL357059
EMBL:AC022542 EMBL:AC091667 EMBL:AL355530 EMBL:AL356100
EMBL:AL392087 EMBL:AL512304 EMBL:BC047716 EMBL:BC139916
EMBL:BC139923 EMBL:AK127277 EMBL:AB011106 IPI:IPI00297233
IPI:IPI00749514 PIR:T00266 RefSeq:NP_997186.1 UniGene:Hs.501127
HSSP:P02468 ProteinModelPortal:Q5VV63 SMR:Q5VV63 IntAct:Q5VV63
PhosphoSite:Q5VV63 DMDM:189081675 PRIDE:Q5VV63 DNASU:26033
Ensembl:ENST00000355044 GeneID:26033 KEGG:hsa:26033 UCSC:uc001lcf.3
UCSC:uc001lcg.3 CTD:26033 GeneCards:GC10P116843 H-InvDB:HIX0021959
HGNC:HGNC:29063 HPA:HPA038070 MIM:612869 neXtProt:NX_Q5VV63
PharmGKB:PA134961599 eggNOG:NOG242225 HOVERGEN:HBG004312
InParanoid:Q5VV63 OMA:YTQQKVS OrthoDB:EOG4QC14F PhylomeDB:Q5VV63
ChiTaRS:ATRNL1 GenomeRNAi:26033 NextBio:47842 ArrayExpress:Q5VV63
Bgee:Q5VV63 CleanEx:HS_ATRNL1 Genevestigator:Q5VV63
InterPro:IPR013111 InterPro:IPR003659 Pfam:PF07974 SMART:SM00423
Uniprot:Q5VV63
Length = 1379
Score = 201 (75.8 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 63/228 (27%), Positives = 89/228 (39%)
Query: 40 CPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQA 99
C C RT C +C TS+G EC W S C+ + + G C L A
Sbjct: 886 CKKPCSLRTSCSNC-TSNG-----MECMWCSSTKRCVDSNAYIISFPYGQC---LEWQTA 936
Query: 100 PQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTXXXXXXXXXXXXXXTCDILFY 159
P++CS C CL CGWC +T G G C L
Sbjct: 937 TCSPQNCSGLRTCGQCLEQPGCGWCNDPSNT--GRGHCIEGSSRGPMK---------LIG 985
Query: 160 QTYPDQVIEVN---NNDSFSWNYVKCPPENECLNDHHTCDPQS--EQCVDLADGFECV-C 213
+ + V++ N ++ W++++CP +C N H TC + EQC +L G +C C
Sbjct: 986 MHHSEMVLDTNLCPKEKNYEWSFIQCPA-CQC-NGHSTCINNNVCEQCKNLTTGKQCQDC 1043
Query: 214 GRGY-NKSEEGGECVPVCSQGCVRGVCS-EPDKCQCDF-GYVGVNCSI 258
GY GG+C C+ +C KC C G G C +
Sbjct: 1044 MPGYYGDPTNGGQCT-ACTCSGHANICHLHTGKCFCTTKGIKGDQCQL 1090
Score = 195 (73.7 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 53/157 (33%), Positives = 76/157 (48%)
Query: 179 YVKCPPENECLN-DHHTCDPQSEQCVDLADGFECV----CGRGYNKSEEG-GECVPVCSQ 232
Y+ P +CL TC PQ+ C L +C+ CG + S G G C+ S+
Sbjct: 921 YIISFPYGQCLEWQTATCSPQN--CSGLRTCGQCLEQPGCGWCNDPSNTGRGHCIEGSSR 978
Query: 233 GCVR--GVC-SEP--DKCQC----DFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNH 283
G ++ G+ SE D C ++ + + C CQCNGH+ C + VC +C N
Sbjct: 979 GPMKLIGMHHSEMVLDTNLCPKEKNYEWSFIQCPA-CQCNGHSTCINNN---VCEQCKNL 1034
Query: 284 TKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLC 320
T G QC C P Y GDP + G+C C+ C+GH +C
Sbjct: 1035 TTGKQCQDCMPGYYGDPTNGGQCTACT--CSGHANIC 1069
Score = 75 (31.5 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 87 GGVCGL-VLGPHQ-APQCPRSCSAYTQCSTCLRHA-HCGWCA 125
G VC V+ P+Q A C + CS T CS C + C WC+
Sbjct: 869 GLVCEKPVVSPNQNARPCKKPCSLRTSCSNCTSNGMECMWCS 910
Score = 69 (29.3 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 24/95 (25%), Positives = 39/95 (41%)
Query: 35 KTGSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVL 94
KT +S RC + DC C ++ G C+W +CIS + C+ V
Sbjct: 659 KTAASDD-RCYRYADCASCTANTNG------CQWCDD-KKCISANSN---CSMSVKNYTK 707
Query: 95 GPHQAPQCPRSCSAYTQCSTCLRHAHCGWCALQRD 129
+ Q C+ T C +C + +C W Q++
Sbjct: 708 CHVRNEQI---CNKLTSCKSCSLNLNCQWDQRQQE 739
Score = 46 (21.3 bits), Expect = 5.3e-12, Sum P(2) = 5.3e-12
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 102 CPRSCSAYTQCST 114
CP +CS + +C+T
Sbjct: 211 CPNNCSGHGKCTT 223
>UNIPROTKB|F1M2P5 [details] [associations]
symbol:Atrnl1 "Protein Atrnl1" species:10116 "Rattus
norvegicus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030246 "carbohydrate binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR015915
Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041 SMART:SM00034
SMART:SM00181 RGD:1563485 GO:GO:0016021 GO:GO:0030246
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 Gene3D:2.130.10.80 InterPro:IPR015916
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR013111
InterPro:IPR003659 Pfam:PF07974 SMART:SM00423
GeneTree:ENSGT00390000001118 IPI:IPI00949489
Ensembl:ENSRNOT00000067127 ArrayExpress:F1M2P5 Uniprot:F1M2P5
Length = 1076
Score = 208 (78.3 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 65/228 (28%), Positives = 89/228 (39%)
Query: 40 CPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQA 99
C C RT C +C TS+G EC W S C+ + + G C L A
Sbjct: 867 CKKPCSLRTSCANC-TSNG-----MECMWCSSTKRCVDSNAYIISFPYGQC---LEWQTA 917
Query: 100 PQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTXXXXXXXXXXXXXXTCDILFY 159
P++CS C CL CGWC +T G G C ++
Sbjct: 918 TCSPQNCSGLRTCGQCLEQPGCGWCNDPSNT--GRGYCIEGSSRGPMKLAGVHNSEVALD 975
Query: 160 QTYPDQVIEVNNNDSFSWNYVKCPPENECLNDHHTCDPQS--EQCVDLADGFECV-CGRG 216
+ + E N + W++++CP +C N H TC + EQC +L G +C C G
Sbjct: 976 TSLCPK--EKN----YEWSFIQCPA-CQC-NGHSTCINNNVCEQCKNLTTGRQCQDCMPG 1027
Query: 217 Y-NKSEEGGECVPVCSQGCVRGVCS-EPDKCQCDF-GYVGVNCSIQCQ 261
Y GG+C C+ G VC KC C G G C + Q
Sbjct: 1028 YYGDPTNGGQCT-ACTCGGHANVCHLHTGKCFCTTKGIKGDQCQLYYQ 1074
Score = 195 (73.7 bits), Expect = 5.7e-15, Sum P(2) = 5.7e-15
Identities = 52/157 (33%), Positives = 74/157 (47%)
Query: 179 YVKCPPENECLN-DHHTCDPQSEQCVDLADGFECV----CGRGYNKSEEG-GECVPVCSQ 232
Y+ P +CL TC PQ+ C L +C+ CG + S G G C+ S+
Sbjct: 902 YIISFPYGQCLEWQTATCSPQN--CSGLRTCGQCLEQPGCGWCNDPSNTGRGYCIEGSSR 959
Query: 233 GCVR--GVCSEP---DKCQC----DFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNH 283
G ++ GV + D C ++ + + C CQCNGH+ C + VC +C N
Sbjct: 960 GPMKLAGVHNSEVALDTSLCPKEKNYEWSFIQCPA-CQCNGHSTCINNN---VCEQCKNL 1015
Query: 284 TKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLC 320
T G QC C P Y GDP + G+C C+ C GH +C
Sbjct: 1016 TTGRQCQDCMPGYYGDPTNGGQCTACT--CGGHANVC 1050
Score = 72 (30.4 bits), Expect = 5.7e-15, Sum P(2) = 5.7e-15
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 87 GGVCGL-VLGPHQ-APQCPRSCSAYTQCSTCLRHA-HCGWCA 125
G VC V+ P+Q A C + CS T C+ C + C WC+
Sbjct: 850 GLVCEKPVVSPNQNARPCKKPCSLRTSCANCTSNGMECMWCS 891
Score = 71 (30.1 bits), Expect = 7.2e-15, Sum P(2) = 7.2e-15
Identities = 22/87 (25%), Positives = 35/87 (40%)
Query: 43 RCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQAPQC 102
RC + DC C ++ G C+W +CIS S C+ V + Q
Sbjct: 647 RCYRYADCASCTANTNG------CQWCDD-KKCISASSN---CSTSVRNYTKCHIRNEQI 696
Query: 103 PRSCSAYTQCSTCLRHAHCGWCALQRD 129
C+ T C +C + +C W Q++
Sbjct: 697 ---CNKLTSCKSCSLNLNCQWDQRQQE 720
Score = 50 (22.7 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 102 CPRSCSAYTQCSTCLRHAHCGWC 124
CP +CS + +C+T + A +C
Sbjct: 193 CPNNCSGHGKCTTSVSVASQVYC 215
>UNIPROTKB|O75882 [details] [associations]
symbol:ATRN "Attractin" species:9606 "Homo sapiens"
[GO:0030246 "carbohydrate binding" evidence=IEA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0040014 "regulation of multicellular organism growth"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=NAS] [GO:0005887 "integral
to plasma membrane" evidence=TAS] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR006652
InterPro:IPR015915 Pfam:PF01344 Pfam:PF01437 PROSITE:PS50026
PROSITE:PS50041 SMART:SM00034 SMART:SM00181 GO:GO:0005737
GO:GO:0005615 GO:GO:0005887 GO:GO:0006979 GO:GO:0030246
GO:GO:0006954 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 PROSITE:PS00615 GO:GO:0040014
GO:GO:0004872 InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
PROSITE:PS01186 InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431
SMART:SM00042 SUPFAM:SSF49854 PROSITE:PS01180 eggNOG:NOG242225
HOVERGEN:HBG004312 InterPro:IPR003659 SMART:SM00423 EMBL:AF218915
EMBL:AF218889 EMBL:AF218890 EMBL:AF218891 EMBL:AF218892
EMBL:AF218893 EMBL:AF218894 EMBL:AF218895 EMBL:AF218896
EMBL:AF218897 EMBL:AF218898 EMBL:AF218899 EMBL:AF218900
EMBL:AF218901 EMBL:AF218902 EMBL:AF218903 EMBL:AF218904
EMBL:AF218905 EMBL:AF218906 EMBL:AF218907 EMBL:AF218908
EMBL:AF218909 EMBL:AF218911 EMBL:AF218912 EMBL:AF218913
EMBL:AF218914 EMBL:AF218910 EMBL:AF106861 EMBL:AK293010
EMBL:AL109805 EMBL:AL132773 EMBL:AL353193 EMBL:BC101705
EMBL:AB011120 IPI:IPI00027235 IPI:IPI00162735 IPI:IPI00939169
RefSeq:NP_001193976.1 RefSeq:NP_647537.1 RefSeq:NP_647538.1
UniGene:Hs.276252 ProteinModelPortal:O75882 SMR:O75882
IntAct:O75882 STRING:O75882 PhosphoSite:O75882 PaxDb:O75882
PRIDE:O75882 Ensembl:ENST00000262919 Ensembl:ENST00000446916
GeneID:8455 KEGG:hsa:8455 UCSC:uc002wil.2 UCSC:uc002wim.2
UCSC:uc021vzz.1 CTD:8455 GeneCards:GC20P003451 HGNC:HGNC:885
HPA:HPA008853 MIM:603130 neXtProt:NX_O75882 PharmGKB:PA25178
InParanoid:O75882 OMA:NPLKGTC OrthoDB:EOG4R23SZ PhylomeDB:O75882
ChiTaRS:ATRN GenomeRNAi:8455 NextBio:31642 ArrayExpress:O75882
Bgee:O75882 Genevestigator:O75882 GermOnline:ENSG00000088812
Uniprot:O75882
Length = 1429
Score = 218 (81.8 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 64/233 (27%), Positives = 93/233 (39%)
Query: 36 TGSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLG 95
+ C C RT C DC + S EC W S + +C+ + Y A G +
Sbjct: 925 SAKQCRTPCALRTACGDCTSGSS------ECMWCSNMKQCVDSN---AYVASFPFGQCME 975
Query: 96 PHQAPQCP-RSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTXXXXXXXXXXXXXXTC 154
+ CP +CS Y CS CL CGWC +T G G C
Sbjct: 976 WYTMSTCPPENCSGYCTCSHCLEQPGCGWCTDPSNT--GKGKCIEGSYKGPVKMPSQAPT 1033
Query: 155 DILFYQTYPDQVIEVNNNDSFSWNYVKCPPENECLNDHHTCDPQS--EQCVDLADGFEC- 211
+ Q + + + ++ ++W+++ CP +C N H C QS E+C +L G C
Sbjct: 1034 GNFYPQPLLNSSMCLEDS-RYNWSFIHCPA-CQC-NGHSKCINQSICEKCENLTTGKHCE 1090
Query: 212 VCGRG-YNKSEEGGECVPVCSQGCVRGVCS-EPDKCQCDF-GYVGVNCSIQCQ 261
C G Y GG+C P C +C+ KC C G G C + C+
Sbjct: 1091 TCISGFYGDPTNGGKCQP-CKCNGHASLCNTNTGKCFCTTKGVKGDECQL-CE 1141
Score = 182 (69.1 bits), Expect = 6.3e-15, Sum P(2) = 6.3e-15
Identities = 49/147 (33%), Positives = 66/147 (44%)
Query: 182 CPPENECLNDHHTCDPQSEQ--CVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVC 239
CPPEN C + + TC EQ C D G+ S +G +P SQ
Sbjct: 982 CPPEN-C-SGYCTCSHCLEQPGCGWCTDPSNTGKGKCIEGSYKGPVKMP--SQAPTGNFY 1037
Query: 240 SEP----DKCQCD--FGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCE 293
+P C D + + ++C CQCNGH+ C +C +C N T G C+ C
Sbjct: 1038 PQPLLNSSMCLEDSRYNWSFIHCPA-CQCNGHSKCINQS---ICEKCENLTTGKHCETCI 1093
Query: 294 PLYVGDPRDNGECVPCSEYCNGHTGLC 320
+ GDP + G+C PC CNGH LC
Sbjct: 1094 SGFYGDPTNGGKCQPCK--CNGHASLC 1118
Score = 89 (36.4 bits), Expect = 6.3e-15, Sum P(2) = 6.3e-15
Identities = 26/107 (24%), Positives = 44/107 (41%)
Query: 25 TDANRTNIKLKTGSSCPL---RCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYE 81
TD +K + S L RCDQ TDC C ++ ++C W + + C+ ++
Sbjct: 682 TDEQEEKLKSECFSKRTLDHDRCDQHTDCYSCTANT------NDCHWCN--DHCVPRNHS 733
Query: 82 ALYCAGGVCGLVLGPHQAPQCPRS-----CSAYTQCSTCLRHAHCGW 123
C+ G + + CP+ C+ T C +C +C W
Sbjct: 734 ---CSEGQISIF----RYENCPKDNPMYYCNKKTSCRSCALDQNCQW 773
Score = 68 (29.0 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 14/40 (35%), Positives = 17/40 (42%)
Query: 87 GGVCGLVLGPHQAPQCPRSCSAYTQCSTCLR-HAHCGWCA 125
G VC H A QC C+ T C C + C WC+
Sbjct: 915 GSVCERPAN-HSAKQCRTPCALRTACGDCTSGSSECMWCS 953
Score = 50 (22.7 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 106 CSAYTQCSTCLRHAH-CGWC 124
C +T C +C + + C WC
Sbjct: 704 CDQHTDCYSCTANTNDCHWC 723
Score = 49 (22.3 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 44 CDQRTDCQDCLTSSGGEGGWHECRWSSMLNECIS 77
C+++T C+ C C+W ECI+
Sbjct: 756 CNKKTSCRSCALDQN-------CQWEPRNQECIA 782
Score = 37 (18.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 5/11 (45%), Positives = 7/11 (63%)
Query: 102 CPRSCSAYTQC 112
CP +CS +C
Sbjct: 250 CPNNCSGRGEC 260
>UNIPROTKB|F1M3T8 [details] [associations]
symbol:Atrnl1 "Protein Atrnl1" species:10116 "Rattus
norvegicus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030246 "carbohydrate binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR015915
Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041 SMART:SM00034
SMART:SM00181 RGD:1563485 GO:GO:0016021 GO:GO:0030246
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 GO:GO:0007186 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431
SMART:SM00042 SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR013111
InterPro:IPR003659 Pfam:PF07974 SMART:SM00423
GeneTree:ENSGT00390000001118 IPI:IPI00358542
Ensembl:ENSRNOT00000023414 ArrayExpress:F1M3T8 Uniprot:F1M3T8
Length = 1199
Score = 206 (77.6 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 64/225 (28%), Positives = 88/225 (39%)
Query: 40 CPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQA 99
C C RT C +C TS+G EC W S C+ + + G C L A
Sbjct: 867 CKKPCSLRTSCANC-TSNG-----MECMWCSSTKRCVDSNAYIISFPYGQC---LEWQTA 917
Query: 100 PQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTXXXXXXXXXXXXXXTCDILFY 159
P++CS C CL CGWC +T G G C ++
Sbjct: 918 TCSPQNCSGLRTCGQCLEQPGCGWCNDPSNT--GRGYCIEGSSRGPMKLAGVHNSEVALD 975
Query: 160 QTYPDQVIEVNNNDSFSWNYVKCPPENECLNDHHTCDPQS--EQCVDLADGFECV-CGRG 216
+ + E N + W++++CP +C N H TC + EQC +L G +C C G
Sbjct: 976 TSLCPK--EKN----YEWSFIQCPA-CQC-NGHSTCINNNVCEQCKNLTTGRQCQDCMPG 1027
Query: 217 Y-NKSEEGGECVPVCSQGCVRGVCS-EPDKCQCDF-GYVGVNCSI 258
Y GG+C C+ G VC KC C G G C +
Sbjct: 1028 YYGDPTNGGQCT-ACTCGGHANVCHLHTGKCFCTTKGIKGDQCQL 1071
Score = 195 (73.7 bits), Expect = 7.5e-15, Sum P(2) = 7.5e-15
Identities = 52/157 (33%), Positives = 74/157 (47%)
Query: 179 YVKCPPENECLN-DHHTCDPQSEQCVDLADGFECV----CGRGYNKSEEG-GECVPVCSQ 232
Y+ P +CL TC PQ+ C L +C+ CG + S G G C+ S+
Sbjct: 902 YIISFPYGQCLEWQTATCSPQN--CSGLRTCGQCLEQPGCGWCNDPSNTGRGYCIEGSSR 959
Query: 233 GCVR--GVCSEP---DKCQC----DFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNH 283
G ++ GV + D C ++ + + C CQCNGH+ C + VC +C N
Sbjct: 960 GPMKLAGVHNSEVALDTSLCPKEKNYEWSFIQCPA-CQCNGHSTCINNN---VCEQCKNL 1015
Query: 284 TKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLC 320
T G QC C P Y GDP + G+C C+ C GH +C
Sbjct: 1016 TTGRQCQDCMPGYYGDPTNGGQCTACT--CGGHANVC 1050
Score = 72 (30.4 bits), Expect = 7.5e-15, Sum P(2) = 7.5e-15
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 87 GGVCGL-VLGPHQ-APQCPRSCSAYTQCSTCLRHA-HCGWCA 125
G VC V+ P+Q A C + CS T C+ C + C WC+
Sbjct: 850 GLVCEKPVVSPNQNARPCKKPCSLRTSCANCTSNGMECMWCS 891
Score = 71 (30.1 bits), Expect = 9.5e-15, Sum P(2) = 9.5e-15
Identities = 22/87 (25%), Positives = 35/87 (40%)
Query: 43 RCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQAPQC 102
RC + DC C ++ G C+W +CIS S C+ V + Q
Sbjct: 647 RCYRYADCASCTANTNG------CQWCDD-KKCISASSN---CSTSVRNYTKCHIRNEQI 696
Query: 103 PRSCSAYTQCSTCLRHAHCGWCALQRD 129
C+ T C +C + +C W Q++
Sbjct: 697 ---CNKLTSCKSCSLNLNCQWDQRQQE 720
Score = 50 (22.7 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 102 CPRSCSAYTQCSTCLRHAHCGWC 124
CP +CS + +C+T + A +C
Sbjct: 193 CPNNCSGHGKCTTSVSVASQVYC 215
>MGI|MGI:2147749 [details] [associations]
symbol:Atrnl1 "attractin like 1" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005575
"cellular_component" evidence=ND] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IPI] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030246
"carbohydrate binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR015915
Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041 SMART:SM00034
SMART:SM00181 MGI:MGI:2147749 GO:GO:0016021 GO:GO:0005886
GO:GO:0030246 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 PROSITE:PS00615 GO:GO:0007186
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 Gene3D:2.60.120.290
InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854
PROSITE:PS01180 HSSP:P02468 CTD:26033 eggNOG:NOG242225
HOVERGEN:HBG004312 OMA:YTQQKVS OrthoDB:EOG4QC14F ChiTaRS:ATRNL1
InterPro:IPR013111 InterPro:IPR003659 Pfam:PF07974 SMART:SM00423
EMBL:AY688677 EMBL:AK172967 EMBL:AK050882 EMBL:AK147492
EMBL:BC030872 EMBL:BC050020 IPI:IPI00462742 IPI:IPI00874371
IPI:IPI00895221 RefSeq:NP_852080.3 UniGene:Mm.245340
ProteinModelPortal:Q6A051 SMR:Q6A051 STRING:Q6A051
PhosphoSite:Q6A051 PaxDb:Q6A051 PRIDE:Q6A051
Ensembl:ENSMUST00000077282 GeneID:226255 KEGG:mmu:226255
UCSC:uc008iai.2 UCSC:uc008iaj.1 GeneTree:ENSGT00390000001118
HOGENOM:HOG000231727 InParanoid:Q6A051 NextBio:378084 Bgee:Q6A051
Genevestigator:Q6A051 Uniprot:Q6A051
Length = 1378
Score = 215 (80.7 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 66/225 (29%), Positives = 89/225 (39%)
Query: 40 CPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQA 99
C C RT C +C TSSG EC W S C+ + + G C L A
Sbjct: 885 CKKPCSLRTSCANC-TSSG-----MECMWCSSTKRCVDSNAYIISFPYGQC---LEWQTA 935
Query: 100 PQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTXXXXXXXXXXXXXXTCDILFY 159
P++CS C CL CGWC +T G G C D++
Sbjct: 936 TCSPQNCSGLRTCGQCLEQPGCGWCNDPSNT--GRGYCIEGSSRGPMKLAGVHNSDVVLD 993
Query: 160 QTYPDQVIEVNNNDSFSWNYVKCPPENECLNDHHTCDPQS--EQCVDLADGFECV-CGRG 216
+ + E N + W++++CP +C N H TC + EQC +L G +C C G
Sbjct: 994 TSLCPK--EKN----YEWSFIQCPA-CQC-NGHSTCINNNVCEQCKNLTTGRQCQECMPG 1045
Query: 217 Y-NKSEEGGECVPVCSQGCVRGVCS-EPDKCQCDF-GYVGVNCSI 258
Y GG+C C+ G VC KC C G G C +
Sbjct: 1046 YYGDPTNGGQCT-ACTCGGHANVCHLHTGKCFCTTKGIKGDQCQL 1089
Score = 197 (74.4 bits), Expect = 7.8e-15, Sum P(2) = 7.8e-15
Identities = 52/157 (33%), Positives = 75/157 (47%)
Query: 179 YVKCPPENECLN-DHHTCDPQSEQCVDLADGFECV----CGRGYNKSEEG-GECVPVCSQ 232
Y+ P +CL TC PQ+ C L +C+ CG + S G G C+ S+
Sbjct: 920 YIISFPYGQCLEWQTATCSPQN--CSGLRTCGQCLEQPGCGWCNDPSNTGRGYCIEGSSR 977
Query: 233 GCVR--GVCSEP---DKCQC----DFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNH 283
G ++ GV + D C ++ + + C CQCNGH+ C + VC +C N
Sbjct: 978 GPMKLAGVHNSDVVLDTSLCPKEKNYEWSFIQCPA-CQCNGHSTCINNN---VCEQCKNL 1033
Query: 284 TKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLC 320
T G QC +C P Y GDP + G+C C+ C GH +C
Sbjct: 1034 TTGRQCQECMPGYYGDPTNGGQCTACT--CGGHANVC 1068
Score = 71 (30.1 bits), Expect = 7.8e-15, Sum P(2) = 7.8e-15
Identities = 22/87 (25%), Positives = 35/87 (40%)
Query: 43 RCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQAPQC 102
RC + DC C ++ G C+W +CIS S C+ V + Q
Sbjct: 665 RCYRYADCASCTANTNG------CQWCDD-KKCISASSN---CSTSVRNYTKCHIRNEQI 714
Query: 103 PRSCSAYTQCSTCLRHAHCGWCALQRD 129
C+ T C +C + +C W Q++
Sbjct: 715 ---CNKLTSCKSCSLNLNCQWDQRQQE 738
Score = 70 (29.7 bits), Expect = 9.9e-15, Sum P(2) = 9.9e-15
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 87 GGVCGL-VLGPHQ-APQCPRSCSAYTQCSTCLRHA-HCGWCA 125
G VC V+ P+Q A C + CS T C+ C C WC+
Sbjct: 868 GLVCEKPVVSPNQNARPCKKPCSLRTSCANCTSSGMECMWCS 909
Score = 50 (22.7 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 102 CPRSCSAYTQCSTCLRHAHCGWC 124
CP +CS + +C+T + A +C
Sbjct: 210 CPNNCSGHGKCTTSVSVASQVYC 232
>UNIPROTKB|K7GNE0 [details] [associations]
symbol:ATRN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030246 "carbohydrate binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR006652
InterPro:IPR015915 Pfam:PF01344 Pfam:PF01437 PROSITE:PS50026
PROSITE:PS50041 SMART:SM00034 SMART:SM00181 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 SUPFAM:SSF49854
PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 EMBL:CU302393 EMBL:CU468397
Ensembl:ENSSSCT00000035365 Uniprot:K7GNE0
Length = 1260
Score = 218 (81.8 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 66/236 (27%), Positives = 94/236 (39%)
Query: 36 TGSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLG 95
+ C C RT C +C + S EC W S + +C+ + Y A G +
Sbjct: 756 SAKQCRTPCALRTACGECTSGSS------ECMWCSNMKQCVDSN---AYVASFPFGQCME 806
Query: 96 PHQAPQCP-RSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTXXXXXXXXXXXXXXTC 154
+ CP +CS Y CS CL CGWC +T G G C
Sbjct: 807 WYTMSSCPPENCSGYCTCSHCLEQPGCGWCTDPSNT--GKGKCIEGSYKGPVKMPSQAPS 864
Query: 155 DILFYQTYPDQVIEVNN--NDS-FSWNYVKCPPENECLNDHHTCDPQS--EQCVDLADGF 209
+YP ++ + DS ++W+++ CP +C N H C QS E+C +L G
Sbjct: 865 G----SSYPQPLLNSSMCLEDSRYNWSFIHCPA-CQC-NGHSKCVNQSVCEKCENLTTGR 918
Query: 210 EC-VCGRG-YNKSEEGGECVPVCSQGCVRGVCS-EPDKCQCDF-GYVGVNCSIQCQ 261
C C G Y GG+C P C +C+ KC C G G C + C+
Sbjct: 919 HCETCISGFYGDPTNGGKCQP-CKCNGHASLCNTNTGKCFCTTKGVKGDECQL-CE 972
Score = 180 (68.4 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 50/147 (34%), Positives = 66/147 (44%)
Query: 182 CPPENECLNDHHTCDPQSEQ--CVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVC 239
CPPEN C + + TC EQ C D G+ S +G +P SQ
Sbjct: 813 CPPEN-C-SGYCTCSHCLEQPGCGWCTDPSNTGKGKCIEGSYKGPVKMP--SQAPSGSSY 868
Query: 240 SEP----DKCQCD--FGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCE 293
+P C D + + ++C CQCNGH+ C VC +C N T G C+ C
Sbjct: 869 PQPLLNSSMCLEDSRYNWSFIHCPA-CQCNGHSKCVNQS---VCEKCENLTTGRHCETCI 924
Query: 294 PLYVGDPRDNGECVPCSEYCNGHTGLC 320
+ GDP + G+C PC CNGH LC
Sbjct: 925 SGFYGDPTNGGKCQPCK--CNGHASLC 949
Score = 87 (35.7 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 21/86 (24%), Positives = 36/86 (41%)
Query: 43 RCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQAPQC 102
RCDQ TDC C ++ ++C W + + C+ ++ C G + + C
Sbjct: 534 RCDQHTDCYSCTANT------NDCHWCN--DHCVPMNHS---CTEGQISIA----KYENC 578
Query: 103 PRS-----CSAYTQCSTCLRHAHCGW 123
P+ C+ T C +C +C W
Sbjct: 579 PKDNPMYYCNKKTSCRSCALDQNCQW 604
Score = 70 (29.7 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 19/59 (32%), Positives = 26/59 (44%)
Query: 71 MLNECISPSYEALYCAGGVCGLVLG-P--HQAPQCPRSCSAYTQCSTCLR-HAHCGWCA 125
+L+E S +A C + G V P H A QC C+ T C C + C WC+
Sbjct: 726 ILSEPSSRGLKAATCINPLNGSVCERPANHSAKQCRTPCALRTACGECTSGSSECMWCS 784
Score = 49 (22.3 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 44 CDQRTDCQDCLTSSGGEGGWHECRWSSMLNECIS 77
C+++T C+ C C+W ECI+
Sbjct: 587 CNKKTSCRSCALDQN-------CQWEPRNQECIA 613
Score = 37 (18.1 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 5/11 (45%), Positives = 7/11 (63%)
Query: 102 CPRSCSAYTQC 112
CP +CS +C
Sbjct: 81 CPNNCSGRGEC 91
Score = 37 (18.1 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 18/75 (24%), Positives = 28/75 (37%)
Query: 40 CPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQA 99
CP C R +C+ +S+ + E W C P +C CG PH+
Sbjct: 81 CPNNCSGRGECKISNSSNTVQCECSE-NWKG--EACDIP-----HCVNN-CGF---PHRG 128
Query: 100 ---PQCPRSCSAYTQ 111
R CS +++
Sbjct: 129 ICNSSDVRGCSCFSE 143
>UNIPROTKB|F1S8B6 [details] [associations]
symbol:ATRN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0040014 "regulation of multicellular organism growth"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030246 "carbohydrate binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001304
InterPro:IPR002165 InterPro:IPR006652 InterPro:IPR015915
Pfam:PF01344 Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041
SMART:SM00034 SMART:SM00181 GO:GO:0016021 GO:GO:0005615
GO:GO:0030246 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0040014 GO:GO:0004872
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 OMA:NPLKGTC EMBL:CU302393
EMBL:CU468397 Ensembl:ENSSSCT00000007826 Uniprot:F1S8B6
Length = 1416
Score = 218 (81.8 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 66/236 (27%), Positives = 94/236 (39%)
Query: 36 TGSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLG 95
+ C C RT C +C + S EC W S + +C+ + Y A G +
Sbjct: 912 SAKQCRTPCALRTACGECTSGSS------ECMWCSNMKQCVDSN---AYVASFPFGQCME 962
Query: 96 PHQAPQCP-RSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTXXXXXXXXXXXXXXTC 154
+ CP +CS Y CS CL CGWC +T G G C
Sbjct: 963 WYTMSSCPPENCSGYCTCSHCLEQPGCGWCTDPSNT--GKGKCIEGSYKGPVKMPSQAPS 1020
Query: 155 DILFYQTYPDQVIEVNN--NDS-FSWNYVKCPPENECLNDHHTCDPQS--EQCVDLADGF 209
+YP ++ + DS ++W+++ CP +C N H C QS E+C +L G
Sbjct: 1021 G----SSYPQPLLNSSMCLEDSRYNWSFIHCPA-CQC-NGHSKCVNQSVCEKCENLTTGR 1074
Query: 210 EC-VCGRG-YNKSEEGGECVPVCSQGCVRGVCS-EPDKCQCDF-GYVGVNCSIQCQ 261
C C G Y GG+C P C +C+ KC C G G C + C+
Sbjct: 1075 HCETCISGFYGDPTNGGKCQP-CKCNGHASLCNTNTGKCFCTTKGVKGDECQL-CE 1128
Score = 180 (68.4 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 50/147 (34%), Positives = 66/147 (44%)
Query: 182 CPPENECLNDHHTCDPQSEQ--CVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVC 239
CPPEN C + + TC EQ C D G+ S +G +P SQ
Sbjct: 969 CPPEN-C-SGYCTCSHCLEQPGCGWCTDPSNTGKGKCIEGSYKGPVKMP--SQAPSGSSY 1024
Query: 240 SEP----DKCQCD--FGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCE 293
+P C D + + ++C CQCNGH+ C VC +C N T G C+ C
Sbjct: 1025 PQPLLNSSMCLEDSRYNWSFIHCPA-CQCNGHSKCVNQS---VCEKCENLTTGRHCETCI 1080
Query: 294 PLYVGDPRDNGECVPCSEYCNGHTGLC 320
+ GDP + G+C PC CNGH LC
Sbjct: 1081 SGFYGDPTNGGKCQPCK--CNGHASLC 1105
Score = 87 (35.7 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 21/86 (24%), Positives = 36/86 (41%)
Query: 43 RCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQAPQC 102
RCDQ TDC C ++ ++C W + + C+ ++ C G + + C
Sbjct: 690 RCDQHTDCYSCTANT------NDCHWCN--DHCVPMNHS---CTEGQISIA----KYENC 734
Query: 103 PRS-----CSAYTQCSTCLRHAHCGW 123
P+ C+ T C +C +C W
Sbjct: 735 PKDNPMYYCNKKTSCRSCALDQNCQW 760
Score = 70 (29.7 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 19/59 (32%), Positives = 26/59 (44%)
Query: 71 MLNECISPSYEALYCAGGVCGLVLG-P--HQAPQCPRSCSAYTQCSTCLR-HAHCGWCA 125
+L+E S +A C + G V P H A QC C+ T C C + C WC+
Sbjct: 882 ILSEPSSRGLKAATCINPLNGSVCERPANHSAKQCRTPCALRTACGECTSGSSECMWCS 940
Score = 49 (22.3 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 44 CDQRTDCQDCLTSSGGEGGWHECRWSSMLNECIS 77
C+++T C+ C C+W ECI+
Sbjct: 743 CNKKTSCRSCALDQN-------CQWEPRNQECIA 769
Score = 37 (18.1 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 5/11 (45%), Positives = 7/11 (63%)
Query: 102 CPRSCSAYTQC 112
CP +CS +C
Sbjct: 237 CPNNCSGRGEC 247
Score = 37 (18.1 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 18/75 (24%), Positives = 28/75 (37%)
Query: 40 CPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQA 99
CP C R +C+ +S+ + E W C P +C CG PH+
Sbjct: 237 CPNNCSGRGECKISNSSNTVQCECSE-NWKG--EACDIP-----HCVNN-CGF---PHRG 284
Query: 100 ---PQCPRSCSAYTQ 111
R CS +++
Sbjct: 285 ICNSSDVRGCSCFSE 299
>UNIPROTKB|F1P2W2 [details] [associations]
symbol:ATRN "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0030246 "carbohydrate binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] InterPro:IPR000742 InterPro:IPR001304
InterPro:IPR002165 InterPro:IPR006652 InterPro:IPR015915
Pfam:PF01344 Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041
SMART:SM00034 SMART:SM00181 GO:GO:0016021 GO:GO:0005615
GO:GO:0030246 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0040014 GO:GO:0004872
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 OMA:NPLKGTC EMBL:AADN02048964
EMBL:AADN02048965 EMBL:AADN02048966 EMBL:AADN02048967
EMBL:AADN02048968 EMBL:AADN02048969 EMBL:AADN02048970
EMBL:AADN02048971 EMBL:AADN02048972 EMBL:AADN02048973
EMBL:AADN02048974 EMBL:AADN02048975 EMBL:AADN02048976
EMBL:AADN02048977 EMBL:AADN02048978 EMBL:AADN02048979
EMBL:AADN02048980 EMBL:AADN02048981 IPI:IPI00572900
ProteinModelPortal:F1P2W2 Ensembl:ENSGALT00000025829 Uniprot:F1P2W2
Length = 1296
Score = 215 (80.7 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 67/236 (28%), Positives = 96/236 (40%)
Query: 36 TGSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLG 95
+ C C RT C +C + S EC W S + +C+ + Y A G +
Sbjct: 790 SAKQCRTPCALRTMCGECTSGSS------ECMWCSNMKQCVDSN---AYVASFPYGQCME 840
Query: 96 PHQAPQCP-RSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTXXXXXXXXXXXXXXTC 154
+ CP +CS Y CS CL CGWC +T G G CT T
Sbjct: 841 WYTMSSCPPENCSGYCTCSHCLEQPGCGWCTDPSNT--GKGKCTDGSYRGPVKVP---TP 895
Query: 155 DILFYQTYPDQVIEVN---NNDSFSWNYVKCPPENECLNDHHTCDPQS--EQCVDLADGF 209
Q+ + V+ V+ +++W++++CP +C N H C +S E+C +L G
Sbjct: 896 SATGKQSL-EPVLNVSMCLEEHNYNWSFIQCPA-CQC-NGHSKCINESICEKCENLTTGK 952
Query: 210 EC-VCGRGY-NKSEEGGECVPVCSQGCVRGVCS-EPDKCQCDF-GYVGVNCSIQCQ 261
C C GY GG C P C VC+ KC C G G C + C+
Sbjct: 953 HCETCISGYYGDPTNGGTCQP-CKCNGHASVCNTNTGKCFCTTKGIKGDECQL-CE 1006
Score = 180 (68.4 bits), Expect = 4.7e-14, Sum P(3) = 4.7e-14
Identities = 47/145 (32%), Positives = 64/145 (44%)
Query: 182 CPPENECLNDHHTCDPQSEQ--CVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVC 239
CPPEN C + + TC EQ C D G+ + S G VP S + +
Sbjct: 847 CPPEN-C-SGYCTCSHCLEQPGCGWCTDPSNTGKGKCTDGSYRGPVKVPTPSATGKQSLE 904
Query: 240 SEPDKCQC----DFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPL 295
+ C ++ + + C CQCNGH+ C +C +C N T G C+ C
Sbjct: 905 PVLNVSMCLEEHNYNWSFIQCPA-CQCNGHSKCINES---ICEKCENLTTGKHCETCISG 960
Query: 296 YVGDPRDNGECVPCSEYCNGHTGLC 320
Y GDP + G C PC CNGH +C
Sbjct: 961 YYGDPTNGGTCQPCK--CNGHASVC 983
Score = 77 (32.2 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 20/81 (24%), Positives = 32/81 (39%)
Query: 43 RCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQAPQC 102
+CDQ TDC C ++ + C+W + ++CIS + P P
Sbjct: 568 KCDQITDCYSCTANT------NNCQWCT--DQCISMHNNCTEEQVPITAYENCPKDNPAY 619
Query: 103 PRSCSAYTQCSTCLRHAHCGW 123
C+ T C +C +C W
Sbjct: 620 --HCNKRTSCKSCAMDQNCQW 638
Score = 71 (30.1 bits), Expect = 4.7e-14, Sum P(3) = 4.7e-14
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 87 GGVC---GLVLGPHQAPQCPRSCSAYTQCSTCLR-HAHCGWCA 125
G VC G+ H A QC C+ T C C + C WC+
Sbjct: 776 GSVCERAGVSSPNHSAKQCRTPCALRTMCGECTSGSSECMWCS 818
Score = 52 (23.4 bits), Expect = 4.7e-14, Sum P(3) = 4.7e-14
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 44 CDQRTDCQDCLTSSGGEGGWHECRWSSMLNECIS 77
C++RT C+ C C+W ECI+
Sbjct: 621 CNKRTSCKSCAMDQN-------CQWEPRNQECIA 647
Score = 37 (18.1 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 5/11 (45%), Positives = 7/11 (63%)
Query: 102 CPRSCSAYTQC 112
CP +CS +C
Sbjct: 115 CPNNCSGRGEC 125
>WB|WBGene00006432 [details] [associations]
symbol:tag-53 species:6239 "Caenorhabditis elegans"
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] InterPro:IPR000742 InterPro:IPR002165
InterPro:IPR006652 InterPro:IPR015915 Pfam:PF01344 Pfam:PF01437
PROSITE:PS50026 SMART:SM00181 GO:GO:0016021 GO:GO:0018991
GO:GO:0040011 InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
PROSITE:PS01186 Gene3D:2.130.10.80 InterPro:IPR015916
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431
SMART:SM00042 SUPFAM:SSF49854 PROSITE:PS01180 eggNOG:NOG242225
InterPro:IPR003659 SMART:SM00423 GeneTree:ENSGT00390000001118
EMBL:AF339882 EMBL:Z69790 PIR:T21694 RefSeq:NP_001024625.2
RefSeq:NP_510443.4 UniGene:Cel.8097 ProteinModelPortal:Q19981
SMR:Q19981 MINT:MINT-1127971 STRING:Q19981 PaxDb:Q19981
PRIDE:Q19981 EnsemblMetazoa:F33C8.1a GeneID:181566
KEGG:cel:CELE_F33C8.1 UCSC:F33C8.1b CTD:181566 WormBase:F33C8.1a
WormBase:F33C8.1b HOGENOM:HOG000018337 InParanoid:Q19981
OMA:MVVIFGH NextBio:914466 Uniprot:Q19981
Length = 1329
Score = 164 (62.8 bits), Expect = 4.3e-14, Sum P(3) = 4.3e-14
Identities = 34/95 (35%), Positives = 48/95 (50%)
Query: 234 CVRGVCSEP--DKCQCDFGYVGVNCSIQCQCNGHADC---AG---PDKLDVCLRCHNHTK 285
C+RG + P K + Y ++C CQCNGH+ C G P ++ C C NHT
Sbjct: 919 CIRGTSTGPLEPKPENSTWYF-IDCPA-CQCNGHSTCFTSVGSFPPVTIEKCQSCQNHTT 976
Query: 286 GPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLC 320
G C++C P + GD R+ G C PC C+ +C
Sbjct: 977 GAHCERCAPGFYGDARNGGVCSPCD--CHHQADMC 1009
Score = 137 (53.3 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 62/266 (23%), Positives = 94/266 (35%)
Query: 14 VAYTLEPRTVKTDANR----TNIK--LKTGSSCPLRCDQRTDCQDCLTSSGGEGGWHECR 67
V Y E ++V D N+ ++ + + CP+ C QR +C DC +C
Sbjct: 792 VVYEYETKSVLADRNKFLSPSHFPSFFRNATECPMPCAQRNNCSDCTDLE-------QCM 844
Query: 68 WSSMLNECISPSYEALYCAGGVCGLVLGPHQAPQCPRSCSA-------YTQCSTCLRHAH 120
W N CI+ L A G C + R C A + C C R
Sbjct: 845 WCPSTNRCINLEAYTLSFAYGQCHSWVTSGSGSVINRVCQAESVVCEEHKTCGECQRDPG 904
Query: 121 CGWCALQRDTTGGMGVCTXXXXXXXXXXXXXXTCDILFYQTYPDQVIEVNNNDSFSWNYV 180
CGW A D+ G+G+C + ++ P + N + + +
Sbjct: 905 CGWLA--DDSKTGLGLCIRGTSTGPLEPKPENST--WYFIDCP--ACQCNGHSTCFTSVG 958
Query: 181 KCPPEN--ECLN-DHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRG 237
PP +C + +HT E+C A GF Y + GG C P C
Sbjct: 959 SFPPVTIEKCQSCQNHTTGAHCERC---APGF-------YGDARNGGVCSP-CDCHHQAD 1007
Query: 238 VCSEPD-KCQCDF-GYVGVNCSIQCQ 261
+C +C C G G C +C+
Sbjct: 1008 MCDPVSGQCFCKTKGVTGDRCD-KCE 1032
Score = 98 (39.6 bits), Expect = 4.3e-14, Sum P(3) = 4.3e-14
Identities = 30/119 (25%), Positives = 47/119 (39%)
Query: 15 AYTLEPRTVKTDANRTNIKLKTGSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNE 74
A ++ T K+ TN L+ C+++TDC C + SG C W S +
Sbjct: 638 ASMIKSSTPKSFDECTNTPLRLALKT---CEEQTDCVSCASKSG-------CGWCSSGEQ 687
Query: 75 CISPSYEALYCAGGVCGLVLGPHQAPQ-----CPRSCSAYTQCSTCLRHAHCGWCALQR 128
C+ E C G G++ + PQ R C+ C +C HC W + +
Sbjct: 688 CLPNEQE---CVDGP-GMLTSWEKCPQRNSVATMRPCNMENNCGSCRISPHCTWYPIDK 742
Score = 97 (39.2 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 28/60 (46%), Positives = 32/60 (53%)
Query: 253 GVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKG---PQCDKCEPLYVGDPRDNGECVPC 309
GV CS C C+ AD P V +C TKG +CDKCE YVG+PR NG PC
Sbjct: 995 GV-CS-PCDCHHQADMCDP----VSGQCFCKTKGVTGDRCDKCEAKYVGNPR-NG--TPC 1045
Score = 79 (32.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 13/25 (52%), Positives = 14/25 (56%)
Query: 348 PTTRARCMHCGNHTTGPKCEDCVEG 372
P T +C C NHTTG CE C G
Sbjct: 962 PVTIEKCQSCQNHTTGAHCERCAPG 986
Score = 49 (22.3 bits), Expect = 3.9e-09, Sum P(3) = 3.9e-09
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 194 TCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRG--VCSEPDKC 245
TC+ Q++ CV A C G+ S G +C+P Q CV G + + +KC
Sbjct: 663 TCEEQTD-CVSCASKSGC----GWCSS--GEQCLPN-EQECVDGPGMLTSWEKC 708
Score = 44 (20.5 bits), Expect = 4.3e-14, Sum P(3) = 4.3e-14
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 325 LASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTG 363
+AS PF+ S L+ F G T C N+ G
Sbjct: 1219 MASRPFASTKMELSMLSQFSSAGGPTPLSIEPCSNYRAG 1257
>ZFIN|ZDB-GENE-030131-8092 [details] [associations]
symbol:atrnl1b "attractin-like 1b" species:7955
"Danio rerio" [GO:0030246 "carbohydrate binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR000742 InterPro:IPR001304
InterPro:IPR002165 InterPro:IPR015915 Pfam:PF01437 PROSITE:PS50026
PROSITE:PS50041 SMART:SM00034 SMART:SM00181
ZFIN:ZDB-GENE-030131-8092 GO:GO:0016021 GO:GO:0030246
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 Gene3D:2.130.10.80 InterPro:IPR015916
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 EMBL:CU464184 EMBL:BX004794
IPI:IPI00834013 RefSeq:XP_697655.4 UniGene:Dr.81107
ProteinModelPortal:E7F6C7 Ensembl:ENSDART00000042514 GeneID:569196
KEGG:dre:569196 CTD:569196 NextBio:20889561 Bgee:E7F6C7
Uniprot:E7F6C7
Length = 1364
Score = 185 (70.2 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 51/160 (31%), Positives = 70/160 (43%)
Query: 179 YVKCPPENECLNDHHTCDPQSEQCVDLADGFECV----CGRGYNKSEEG-GECVPVCSQG 233
YV P +CL + T D S+ C L C+ CG + S G G+C+ +G
Sbjct: 905 YVISFPYGQCL-EWQTADCLSQNCSGLRTCGLCLEQPDCGWCGDPSNTGRGQCM----EG 959
Query: 234 CVRGVCSEPDKCQCD-------------FGYVGVNCSIQCQCNGHADCAGPDKLDVCLRC 280
RG P + D F + + C CQCNGH+ C + +C +C
Sbjct: 960 SYRGPMKSPSRHSQDMVLETGLCPKERGFEWAFIQCPA-CQCNGHSTCVN---VSMCEQC 1015
Query: 281 HNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLC 320
N T G C+ C P Y GDP + G+C C CNGH +C
Sbjct: 1016 RNLTTGLHCETCLPGYYGDPTNGGKCQACK--CNGHANMC 1053
Score = 183 (69.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 61/225 (27%), Positives = 80/225 (35%)
Query: 40 CPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQA 99
C C RT C +C TS EC W C+ + + G C L A
Sbjct: 870 CKTPCSLRTTCDNC-TSQA-----MECMWCGSTKRCVDSNAYVISFPYGQC---LEWQTA 920
Query: 100 PQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTXXXXXXXXXXXXXXTCDILFY 159
++CS C CL CGWC +T G G C + D++
Sbjct: 921 DCLSQNCSGLRTCGLCLEQPDCGWCGDPSNT--GRGQCMEGSYRGPMKSPSRHSQDMVL- 977
Query: 160 QTYPDQVIEVNNNDSFSWNYVKCPPENECLNDHHTCDPQS--EQCVDLADGFEC-VCGRG 216
+ F W +++CP +C N H TC S EQC +L G C C G
Sbjct: 978 -----ETGLCPKERGFEWAFIQCPA-CQC-NGHSTCVNVSMCEQCRNLTTGLHCETCLPG 1030
Query: 217 Y-NKSEEGGECVPVCSQGCVRGVCSE-PDKCQCDF-GYVGVNCSI 258
Y GG+C C +C E KC C G G C +
Sbjct: 1031 YYGDPTNGGKC-QACKCNGHANMCHELTGKCFCTTKGIKGDQCQL 1074
Score = 72 (30.4 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 22/87 (25%), Positives = 33/87 (37%)
Query: 43 RCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQAPQC 102
RC + +DC C ++ G C+W +CIS C V P + Q
Sbjct: 648 RCYRFSDCTSCTANTNG------CQWCDS-KKCISALSN---CTSTVKNFTKCPIRNEQI 697
Query: 103 PRSCSAYTQCSTCLRHAHCGWCALQRD 129
CS C +C + C W Q++
Sbjct: 698 ---CSKMANCKSCSLNLSCQWDPQQQE 721
Score = 68 (29.0 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 16/41 (39%), Positives = 19/41 (46%)
Query: 87 GGVCGL-VLGPHQ-APQCPRSCSAYTQCSTCLRHA-HCGWC 124
G +C V+ P+Q A C CS T C C A C WC
Sbjct: 853 GLICEKPVVSPNQNARPCKTPCSLRTTCDNCTSQAMECMWC 893
Score = 45 (20.9 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 102 CPRSCSAYTQCST 114
CP +CS + +CS+
Sbjct: 192 CPNNCSGHGKCSS 204
>ZFIN|ZDB-GENE-081028-60 [details] [associations]
symbol:atrnl1a "attractin-like 1a" species:7955
"Danio rerio" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0030246 "carbohydrate
binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001304
InterPro:IPR002165 InterPro:IPR006652 InterPro:IPR015915
InterPro:IPR016201 Pfam:PF01344 Pfam:PF01437 PROSITE:PS50026
PROSITE:PS50041 SMART:SM00034 SMART:SM00181 ZFIN:ZDB-GENE-081028-60
GO:GO:0016021 GO:GO:0007275 GO:GO:0030246 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0004872
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 SUPFAM:SSF103575 EMBL:AL954359
EMBL:CABZ01039684 EMBL:CABZ01039685 EMBL:CABZ01039686
EMBL:CABZ01039687 EMBL:CABZ01039688 EMBL:CABZ01039689
EMBL:CABZ01039690 EMBL:CABZ01039691 EMBL:CABZ01039692
EMBL:CABZ01039693 EMBL:CABZ01039694 EMBL:CABZ01039695
EMBL:CABZ01039696 EMBL:CR762487 EMBL:CT573136 IPI:IPI00836296
Ensembl:ENSDART00000089533 ArrayExpress:F1Q4X2 Bgee:F1Q4X2
Uniprot:F1Q4X2
Length = 1400
Score = 201 (75.8 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 66/226 (29%), Positives = 84/226 (37%)
Query: 40 CPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQA 99
C + C RT C +C TS EC W S C+ + + G C L Q
Sbjct: 908 CKMPCALRTTCANC-TSQA-----MECMWCSSTKRCVDSNAYVISFPYGQC---L-EWQT 957
Query: 100 PQC-PRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTXXXXXXXXXXXXXXTCDILF 158
C ++CS + C CL CGWC DT G G C + + +
Sbjct: 958 GDCGAQNCSGHRTCGQCLEQPDCGWCGDPTDT--GQGQCIEGSYRGPMRSLSRQSRERVL 1015
Query: 159 YQTYPDQVIEVNNNDSFSWNYVKCPPENECLNDHHTCDPQS--EQCVDLADGFEC-VCGR 215
D + + F W Y+ CP +C N H TC S EQC +L G C C
Sbjct: 1016 -----DTSV-CSREKGFDWAYITCPA-CQC-NGHSTCVNGSVCEQCKNLTAGLHCQFCLP 1067
Query: 216 GY-NKSEEGGECVPVCSQGCVRGVC-SEPDKCQCDF-GYVGVNCSI 258
GY GG+C C VC S KC C G G C +
Sbjct: 1068 GYYGDPTNGGKC-QACRCNNHANVCHSSSGKCYCTTKGVKGDQCQL 1112
Score = 185 (70.2 bits), Expect = 2.7e-12, Sum P(3) = 2.7e-12
Identities = 51/169 (30%), Positives = 73/169 (43%)
Query: 166 VIEVNNNDSFSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEG-G 224
VI W C +N C + H TC QC++ D CG + ++ G G
Sbjct: 944 VISFPYGQCLEWQTGDCGAQN-C-SGHRTCG----QCLEQPD-----CGWCGDPTDTGQG 992
Query: 225 ECVPVCSQGCVRGVCSEP-----DKCQCD----FGYVGVNCSIQCQCNGHADCAGPDKLD 275
+C+ +G +R + + D C F + + C CQCNGH+ C
Sbjct: 993 QCIEGSYRGPMRSLSRQSRERVLDTSVCSREKGFDWAYITCPA-CQCNGHSTCVNGS--- 1048
Query: 276 VCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLCINAS 324
VC +C N T G C C P Y GDP + G+C C CN H +C ++S
Sbjct: 1049 VCEQCKNLTAGLHCQFCLPGYYGDPTNGGKCQACR--CNNHANVCHSSS 1095
Score = 56 (24.8 bits), Expect = 2.7e-12, Sum P(3) = 2.7e-12
Identities = 19/69 (27%), Positives = 30/69 (43%)
Query: 18 LEPRTVKTDANRTNIKLKTGSSCPLR-------CDQRTDCQDCLTSSGGEGGWHECRWSS 70
+E R D++ N + S CP R C Q +DC C ++ ++C+W
Sbjct: 616 IENRCEPWDSSHANDSVPA-SFCPARTNAADKQCQQFSDCASCTANT------NDCQWCE 668
Query: 71 MLNECISPS 79
+CIS S
Sbjct: 669 D-KKCISSS 676
Score = 48 (22.0 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 102 CPRSCSAYTQCSTCLRHAHCGWCALQR 128
CP +CS + +C+T + +C +R
Sbjct: 191 CPNNCSGHGRCTTGNSISSSVYCECER 217
Score = 45 (20.9 bits), Expect = 2.7e-12, Sum P(3) = 2.7e-12
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 106 CSAYTQCSTCLRHAHCGWCALQRD 129
CS C +C + +C W Q++
Sbjct: 736 CSKLVNCRSCSLNINCQWEPQQQE 759
>FB|FBgn0259896 [details] [associations]
symbol:nimC1 "nimrod C1" species:7227 "Drosophila
melanogaster" [GO:0017147 "Wnt-protein binding" evidence=ISS]
[GO:0016055 "Wnt receptor signaling pathway" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016021 "integral
to membrane" evidence=ISM] [GO:0006909 "phagocytosis" evidence=IMP]
InterPro:IPR000742 InterPro:IPR011489 PROSITE:PS51041 SMART:SM00181
GO:GO:0016021 GO:GO:0005886 EMBL:AE014134 GO:GO:0006909
InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR009030
SUPFAM:SSF57184 GeneTree:ENSGT00660000095436 HSSP:P02876
FlyBase:FBgn0259896 ChiTaRS:nimC1 RefSeq:NP_609693.1
UniGene:Dm.8746 ProteinModelPortal:Q9VJU5 SMR:Q9VJU5 IntAct:Q9VJU5
MINT:MINT-295945 STRING:Q9VJU5 EnsemblMetazoa:FBtr0080615
GeneID:34816 KEGG:dme:Dmel_CG8942 UCSC:CG8942-RA CTD:34816
InParanoid:Q9VJU5 OMA:CEYVDEC PhylomeDB:Q9VJU5 GenomeRNAi:34816
NextBio:790360 ArrayExpress:Q9VJU5 Bgee:Q9VJU5 Uniprot:Q9VJU5
Length = 620
Score = 192 (72.6 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 49/150 (32%), Positives = 65/150 (43%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGF---ECVCGRGYNKSEEGGECVPVCSQGCVRGV 238
C P ND C P E+C D A +C C GY S +CVP CS+GC G
Sbjct: 262 CKPGYVMRND--LCQPHCEKCSDNAHCVAPNQCECFPGYESSGADKKCVPKCSKGCTNGF 319
Query: 239 CSEPDKCQCDFGY-VGVN--CSIQCQCNG-HADCAGPDKLDVCLRCHNHTKGPQCDKCEP 294
C P+ C C GY +G N C +C N H C P+ C + K +C+P
Sbjct: 320 CFAPETCVCSIGYQMGPNQVCEPKCSLNCVHGKCTSPETC-TCDPGYRF-KDNSHHECDP 377
Query: 295 LYVGDPRDNGECVPCSEYCNGHTGLCINAS 324
+ NG CV +C H G +N++
Sbjct: 378 I-CDSGCSNGHCV-APNFCICHDGYQLNST 405
Score = 166 (63.5 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 68/266 (25%), Positives = 99/266 (37%)
Query: 22 TVKTDANRTNIKLKTGSSCPLRCDQRTDCQ-----DCLTSSGGEGGWHECRWSSMLNECI 76
TV D + N CP C Q + C +C G+ G CR + + C
Sbjct: 192 TVFPDGYKNNSNGNCSPICPKDCGQNSRCVRPGVCECENGYAGDDGGTNCR--PVCSTC- 248
Query: 77 SPSYEALYCAGGVCGLVLG-PHQAPQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGG-- 133
P L + GVC G + C C + + C+ C C +++G
Sbjct: 249 -PE-NGLCLSPGVCVCKPGYVMRNDLCQPHCEKCSDNAHCVAPNQCE-CFPGYESSGADK 305
Query: 134 --MGVCTXXXXXXXXXXXXXXTCDILFYQTYPDQVIEVNNNDSFSWNYVKCPPENECL-- 189
+ C+ C I YQ P+QV E S + + KC C
Sbjct: 306 KCVPKCSKGCTNGFCFAPETCVCSI-GYQMGPNQVCEPKC--SLNCVHGKCTSPETCTCD 362
Query: 190 -------NDHHTCDPQSEQ-CVD---LADGFECVCGRGYNKSEEG---GECVPVCSQGCV 235
N HH CDP + C + +A F C+C GY + C P+C +GC
Sbjct: 363 PGYRFKDNSHHECDPICDSGCSNGHCVAPNF-CICHDGYQLNSTNPVTSMCQPIC-KGCQ 420
Query: 236 RGVCSEPDKCQCDFGYVGVN--CSIQ 259
G C P+ C+C+ GY +N C +Q
Sbjct: 421 FGDCVAPNVCECNVGYENINGLCELQ 446
Score = 145 (56.1 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 36/117 (30%), Positives = 55/117 (47%)
Query: 211 CVCGRGYNKSEEGGECVPVCSQGCVR-GVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCA 269
C C GY ++ C+PVC + C CSEP KC+C+ GY V +G+ + +
Sbjct: 144 CSCQNGYKRTSPSDNCLPVCEKECGHHSFCSEPGKCECEPGYEKVGNGTVFP-DGYKNNS 202
Query: 270 GPDKLDVCLR-CHNHTK--GPQCDKCEPLYVGDPRDNG-ECVPCSEYCNGHTGLCIN 322
+ +C + C +++ P +CE Y GD D G C P C GLC++
Sbjct: 203 NGNCSPICPKDCGQNSRCVRPGVCECENGYAGD--DGGTNCRPVCSTCP-ENGLCLS 256
Score = 139 (54.0 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 47/148 (31%), Positives = 60/148 (40%)
Query: 184 PENECLNDHHTCDP-------QSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVR 236
P+ N + C P Q+ +CV G C C GY + G C PVCS
Sbjct: 195 PDGYKNNSNGNCSPICPKDCGQNSRCV--RPGV-CECENGYAGDDGGTNCRPVCSTCPEN 251
Query: 237 GVCSEPDKCQCDFGYVGVN--CSIQCQ-CNGHADCAGPDKLDVCLRCHNHTKGPQCDKCE 293
G+C P C C GYV N C C+ C+ +A C P+ QC+ C
Sbjct: 252 GLCLSPGVCVCKPGYVMRNDLCQPHCEKCSDNAHCVAPN---------------QCE-CF 295
Query: 294 PLYVGDPRDNGECVP-CSEYCNGHTGLC 320
P Y D +CVP CS+ C G C
Sbjct: 296 PGYESSGADK-KCVPKCSKGCTN--GFC 320
Score = 138 (53.6 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 40/112 (35%), Positives = 49/112 (43%)
Query: 213 CGRGYNKSEEGGECVPVCSQGCVR-GVCSEPDKCQCDFGYVGVNCSIQCQ--CNGHADCA 269
C GY S E C PVC Q C + G CS P+ C C+ GY G++C C C + C
Sbjct: 82 CCEGYEGSVEN--CKPVCRQQCPQHGFCSSPNTCSCNAGYGGIDCHPVCPTVCGKNEFC- 138
Query: 270 GPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVP-CSEYCNGHTGLC 320
D+ VC C N K P DN C+P C + C GH C
Sbjct: 139 --DRPGVC-SCQNGYKRTS-----------PSDN--CLPVCEKEC-GHHSFC 173
Score = 45 (20.9 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 22/80 (27%), Positives = 27/80 (33%)
Query: 40 CPLRCDQRTDCQDCLTSS--GGEGG--WHE-CRWSSMLNE-CISPSYEALYCAGGVCGLV 93
C +C Q C T S G GG H C NE C P C G
Sbjct: 97 CRQQCPQHGFCSSPNTCSCNAGYGGIDCHPVCPTVCGKNEFCDRPG--VCSCQNGYKRTS 154
Query: 94 LGPHQAPQCPRSCSAYTQCS 113
+ P C + C ++ CS
Sbjct: 155 PSDNCLPVCEKECGHHSFCS 174
>FB|FBgn0028939 [details] [associations]
symbol:nimC2 "nimrod C2" species:7227 "Drosophila
melanogaster" [GO:0006909 "phagocytosis" evidence=ISS] [GO:0016021
"integral to membrane" evidence=ISM] InterPro:IPR000742
SMART:SM00181 GO:GO:0016021 EMBL:AE014134 GO:GO:0006909
GeneTree:ENSGT00660000095436 InterPro:IPR003341 Pfam:PF02363
RefSeq:NP_788047.1 UniGene:Dm.12176 ProteinModelPortal:Q86BL2
SMR:Q86BL2 STRING:Q86BL2 PRIDE:Q86BL2 EnsemblMetazoa:FBtr0080589
GeneID:34818 KEGG:dme:Dmel_CG18146 UCSC:CG18146-RB CTD:34818
FlyBase:FBgn0028939 InParanoid:Q86BL2 OMA:NECTREP OrthoDB:EOG4HQC0P
PhylomeDB:Q86BL2 GenomeRNAi:34818 NextBio:790370
ArrayExpress:Q86BL2 Bgee:Q86BL2 Uniprot:Q86BL2
Length = 701
Score = 187 (70.9 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 51/145 (35%), Positives = 75/145 (51%)
Query: 179 YVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGV 238
Y++ NEC+ + C S +C+ L + C+CG+GY ++ G C P CS+ CV G
Sbjct: 69 YIR-DENNECVPLCNDCGA-SGKCL-LPN--VCLCGKGYVSRKDHGHCEPECSESCVNGK 123
Query: 239 CSEPDKCQCDFGYVGVNCSIQCQCNGHA--DCAGPDKLDV--CLRCHN-HTKGPQCDKCE 293
C PD+C+C G+ VN S Q C DCA L+ CL C+N + + + KC
Sbjct: 124 CVAPDECECLAGHRFVNGS-QTACEPICVEDCANGRCLETGKCL-CNNGYQRDEKLKKCV 181
Query: 294 PLYVGDPRDNGECVPCSEYCNGHTG 318
P+ D +G+CV +E C H G
Sbjct: 182 PI-CQDACYHGDCVAPNE-CRCHPG 204
Score = 172 (65.6 bits), Expect = 8.1e-10, P = 8.1e-10
Identities = 52/159 (32%), Positives = 72/159 (45%)
Query: 181 KC--PPENECLNDHH-------TCDPQS-EQCVD---LADGFECVCGRGYNKSEEGGECV 227
KC P E ECL H C+P E C + L G +C+C GY + E+ +CV
Sbjct: 123 KCVAPDECECLAGHRFVNGSQTACEPICVEDCANGRCLETG-KCLCNNGYQRDEKLKKCV 181
Query: 228 PVCSQGCVRGVCSEPDKCQCDFGY---VGVN--CSIQCQ--C-NGHADCAGPDKLDVCLR 279
P+C C G C P++C+C G+ +GV C C C NG+ C G + + C
Sbjct: 182 PICQDACYHGDCVAPNECRCHPGHEQRLGVPWICDPICSSGCANGY--CQGAE-VCACKM 238
Query: 280 CHNHTKGPQCDKCEPLYVGDPRDNGECV-PCSEYCN-GH 316
+ H CEP+ P NG C+ P C+ GH
Sbjct: 239 GYAHKDNTLASGCEPV-CNPPCTNGTCISPGHCACSEGH 276
Score = 161 (61.7 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 44/136 (32%), Positives = 59/136 (43%)
Query: 195 CDPQSEQ-CVD--LADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGY 251
CDP+ + C + + C C GY ++ ECVP C C G CS P C+CD G+
Sbjct: 493 CDPECQPGCRNGTCVEPNSCACFAGYEDTKVPYECVPSCRPRCENGRCSSPGHCECDPGH 552
Query: 252 VGVN------CSIQCQ--CNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDN 303
V N C QCQ C +A+C P+K CL + + CEP+
Sbjct: 553 VVTNSSEPNSCRPQCQEQCI-NAECVAPEKC-ACLPRYRFLPDSSTE-CEPICSKGCLSG 609
Query: 304 GECVPCSEYCNGHTGL 319
ECV + C G L
Sbjct: 610 QECV-APDTCAGFESL 624
Score = 150 (57.9 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 46/116 (39%), Positives = 53/116 (45%)
Query: 210 ECVCGRGY--NKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGV----NCSIQC--Q 261
EC C GY N S C P+CSQGCV G C P+ CQCD G++ C C +
Sbjct: 406 ECRCFTGYRPNPSLGANVCEPICSQGCVHGFCIAPEICQCDLGFIKRWATGTCEPHCPQK 465
Query: 262 C-NGHADCAGPDKLDVCLRCHNHTK-GPQCDK-CEPLYVGDPRDNGECV-PCSEYC 313
C N H C G VC RC+ K P C+P R NG CV P S C
Sbjct: 466 CVNSH--CLGSG---VC-RCYEGYKLRPGSTSICDPECQPGCR-NGTCVEPNSCAC 514
Score = 149 (57.5 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 38/118 (32%), Positives = 53/118 (44%)
Query: 195 CDPQSEQCVDLADGFECVCGRGYNKSEEGG-ECVPVCSQGCVRGVCSEPDKCQCDFGYVG 253
C+P ++ G C C G+ +E ECVP C GC G CS P +C+C G+
Sbjct: 255 CNPPCTNGTCISPG-HCACSEGHVFAEGSRHECVPSCRSGCENGYCSSPGRCECHEGFEK 313
Query: 254 VN---CSIQCQ--CNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGEC 306
+ CS C+ C ++ CA PD C + G + CEP + R NG C
Sbjct: 314 TSPHRCSPTCRPGCGQNSRCAAPDTC-ACDVGYVFVNGSTTE-CEPFCPRNCR-NGIC 368
Score = 114 (45.2 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 38/131 (29%), Positives = 56/131 (42%)
Query: 211 CVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGY-----VGVN-CSIQC-QCN 263
C C G+ ++ C+PVCS+ C+ G C P++C+C GY +G N C C Q
Sbjct: 374 CTCLEGF-QALLSFYCIPVCSKTCIHGSCVAPNECRCFTGYRPNPSLGANVCEPICSQGC 432
Query: 264 GHADCAGPDKLDVCLRCH-NHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLCIN 322
H C P+ +C +C K CEP + N C+ S C + G +
Sbjct: 433 VHGFCIAPE---IC-QCDLGFIKRWATGTCEP-HCPQKCVNSHCLG-SGVCRCYEGYKLR 486
Query: 323 ASLASLPFSPE 333
S+ PE
Sbjct: 487 PGSTSI-CDPE 496
Score = 114 (45.2 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 38/133 (28%), Positives = 50/133 (37%)
Query: 194 TCDPQSEQCVDLADGFECVCGRGY---NKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFG 250
TC P Q A C C GY N S EC P C + C G+CS P C C G
Sbjct: 322 TCRPGCGQNSRCAAPDTCACDVGYVFVNGSTT--ECEPFCPRNCRNGICSSPGVCTCLEG 379
Query: 251 YVGVNCSIQC--QCNG---HADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGE 305
+ + S C C+ H C P++ C + + CEP+ +G
Sbjct: 380 FQAL-LSFYCIPVCSKTCIHGSCVAPNECR-CFTGYRPNPSLGANVCEPI-CSQGCVHGF 436
Query: 306 CVPCSEYCNGHTG 318
C+ E C G
Sbjct: 437 CI-APEICQCDLG 448
Score = 51 (23.0 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 15/48 (31%), Positives = 20/48 (41%)
Query: 84 YCAGG-VCGLVLG-PHQ----APQCPRSCSAYTQCSTCLRHAHCGWCA 125
YC G VC +G H+ A C C+ TC+ HC C+
Sbjct: 227 YCQGAEVCACKMGYAHKDNTLASGCEPVCNPPCTNGTCISPGHCA-CS 273
>FB|FBgn0243514 [details] [associations]
symbol:eater "eater" species:7227 "Drosophila melanogaster"
[GO:0006910 "phagocytosis, recognition" evidence=IMP] [GO:0051635
"bacterial cell surface binding" evidence=IDA] [GO:0051637
"Gram-positive bacterial cell surface binding" evidence=IDA]
[GO:0046331 "lateral inhibition" evidence=IMP] InterPro:IPR000742
SMART:SM00181 EMBL:AE014297 GO:GO:0046331 InterPro:IPR009030
SUPFAM:SSF57184 GO:GO:0006910 GO:GO:0051637 InterPro:IPR003341
Pfam:PF02363 OrthoDB:EOG4HQC0P RefSeq:NP_651533.2 UniGene:Dm.16409
ProteinModelPortal:Q9VB78 SMR:Q9VB78 STRING:Q9VB78 GeneID:43262
KEGG:dme:Dmel_CG6124 UCSC:CG6124-RA CTD:43262 FlyBase:FBgn0243514
InParanoid:Q9VB78 OMA:CNDGYSK PhylomeDB:Q9VB78 GenomeRNAi:43262
NextBio:833030 ArrayExpress:Q9VB78 Bgee:Q9VB78 Uniprot:Q9VB78
Length = 1054
Score = 182 (69.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 62/198 (31%), Positives = 89/198 (44%)
Query: 189 LNDHHTCDPQ-SEQCVD---LADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDK 244
++ + C P S C + +A G +C C GY+K E G C P+CS+GC G C P+K
Sbjct: 453 MDSENRCSPVCSGGCKNGFCVAPG-KCSCDEGYSK-ETGNSCKPICSKGCENGFCDAPEK 510
Query: 245 CQCDFGYV--GVN-CSIQCQ--C-NGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVG 298
C C+ GY G N CS C C NG C P+K C ++ G + C+P+
Sbjct: 511 CSCNDGYEMDGENRCSPVCSGGCKNGF--CVAPEKCS-CDEGYSKETG---NSCKPI-CS 563
Query: 299 DPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCG 358
+ +NG C E C+ + G ++ P SGG F P + C
Sbjct: 564 NGCENGFC-DAPEKCSCNDGYEMDGENRCSPVC--SGGCKN--GFC-VAPG-KCSCDEGY 616
Query: 359 NHTTGPKCED-CVEGKEN 375
+ TG C+ C +G EN
Sbjct: 617 SKETGNSCKPICSKGCEN 634
Score = 173 (66.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 49/140 (35%), Positives = 66/140 (47%)
Query: 189 LNDHHTCDPQ-SEQCVD---LADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDK 244
++ + C P S C + +A G +C C GY+K E C P C GCV G+C PD
Sbjct: 849 MDSENRCSPVCSGGCKNGFCVAPG-KCSCDEGYSKETEIS-CAPFCKDGCVNGLCVSPDF 906
Query: 245 CQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHT--KGP-QCDKCEPLYVGDPR 301
C+CD GY+ V S CQ + + G D D C N T +G C K L+ +
Sbjct: 907 CKCDDGYIFVEESKSCQLD--KELLG-DYSDCDKNCRNGTCVEGICTCSKQYKLHRNEDD 963
Query: 302 DNGECVP-CSEYCNGHTGLC 320
+N C+P C C GLC
Sbjct: 964 NNLICLPICEPECLN--GLC 981
Score = 173 (66.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 60/198 (30%), Positives = 86/198 (43%)
Query: 189 LNDHHTCDPQ-SEQCVD---LADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDK 244
++ + C P S C + +A G +C C GY+K E G C P+CS+GC G C P+K
Sbjct: 651 MDSENRCSPVCSGGCKNGFCIAPG-KCSCDEGYSK-ETGNSCKPICSKGCENGFCDAPEK 708
Query: 245 CQCDFGYV--GVN-CSIQCQ--C-NGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVG 298
C C+ GY N CS C C NG C P K C ++ G + C+P+
Sbjct: 709 CSCNDGYEMDSENRCSPVCSGGCKNGF--CVAPGKCS-CDEGYSKETG---NSCKPI-CS 761
Query: 299 DPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCG 358
+NG C E C+ + G ++ P SGG + G + C
Sbjct: 762 KGCENGFC-EAPEKCSCNDGYEMDGENRCSPVC--SGGCKN-GFCIAPG---KCSCDEGY 814
Query: 359 NHTTGPKCED-CVEGKEN 375
+ TG C+ C +G EN
Sbjct: 815 SRETGNSCKPICSKGCEN 832
Score = 171 (65.3 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 63/201 (31%), Positives = 89/201 (44%)
Query: 189 LNDHHTCDPQ-SEQCVD---LADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDK 244
++ + C P S C + +A G +C C GY+K E G C P+CS+GC G C P+K
Sbjct: 717 MDSENRCSPVCSGGCKNGFCVAPG-KCSCDEGYSK-ETGNSCKPICSKGCENGFCEAPEK 774
Query: 245 CQCDFGYV--GVN-CSIQCQ--C-NGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVG 298
C C+ GY G N CS C C NG C P K C ++ G + C+P+
Sbjct: 775 CSCNDGYEMDGENRCSPVCSGGCKNGF--CIAPGKCS-CDEGYSRETG---NSCKPI-CS 827
Query: 299 DPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSE---LA---AFLDEGPTTRA 352
+NG C E C+ + G +++ P SGG +A DEG +
Sbjct: 828 KGCENGFC-DAPEKCSCNDGYEMDSENRCSPVC--SGGCKNGFCVAPGKCSCDEGYSKET 884
Query: 353 RCMHCGNHTTGPKCED-CVEG 372
+ C P C+D CV G
Sbjct: 885 E-ISCA-----PFCKDGCVNG 899
Score = 171 (65.3 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 60/198 (30%), Positives = 84/198 (42%)
Query: 189 LNDHHTCDPQ-SEQCVD---LADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDK 244
++ + C P S C + +A G +C C GY+K E G C P+CS+GC G C P+K
Sbjct: 387 MDGENRCSPVCSGGCKNGFCVAPG-KCSCDEGYSK-ETGNSCKPICSKGCENGFCDAPEK 444
Query: 245 CQCDFGYV--GVN-CSIQCQ--C-NGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVG 298
C C+ GY N CS C C NG C P K C ++ G + C+P+
Sbjct: 445 CSCNDGYEMDSENRCSPVCSGGCKNGF--CVAPGKCS-CDEGYSKETG---NSCKPI-CS 497
Query: 299 DPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCG 358
+NG C E C+ + G ++ P SGG E + C
Sbjct: 498 KGCENGFC-DAPEKCSCNDGYEMDGENRCSPVC--SGGCKNGFCVAPE----KCSCDEGY 550
Query: 359 NHTTGPKCED-CVEGKEN 375
+ TG C+ C G EN
Sbjct: 551 SKETGNSCKPICSNGCEN 568
Score = 170 (64.9 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 61/198 (30%), Positives = 87/198 (43%)
Query: 189 LNDHHTCDPQ-SEQCVD---LADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDK 244
++ + C P S C + +A G +C C GY+K E G C P+CS+GC G C P+K
Sbjct: 585 MDGENRCSPVCSGGCKNGFCVAPG-KCSCDEGYSK-ETGNSCKPICSKGCENGFCDAPEK 642
Query: 245 CQCDFGYV--GVN-CSIQCQ--C-NGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVG 298
C C+ GY N CS C C NG C P K C ++ G + C+P+
Sbjct: 643 CSCNDGYEMDSENRCSPVCSGGCKNGF--CIAPGKCS-CDEGYSKETG---NSCKPI-CS 695
Query: 299 DPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCG 358
+NG C E C+ + G +++ P SGG F P + C
Sbjct: 696 KGCENGFC-DAPEKCSCNDGYEMDSENRCSPVC--SGGCKN--GFC-VAPG-KCSCDEGY 748
Query: 359 NHTTGPKCED-CVEGKEN 375
+ TG C+ C +G EN
Sbjct: 749 SKETGNSCKPICSKGCEN 766
Score = 169 (64.5 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 61/198 (30%), Positives = 86/198 (43%)
Query: 189 LNDHHTCDPQ-SEQCVD---LADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDK 244
++ + C P S C + +A G +C C GY K G C P+CS+GC G C P+K
Sbjct: 321 MDSENRCSPVCSGGCKNGFCVAPG-KCSCDEGYIKGT-GNSCKPICSKGCENGFCDAPEK 378
Query: 245 CQCDFGYV--GVN-CSIQCQ--C-NGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVG 298
C C+ GY G N CS C C NG C P K C ++ G + C+P+
Sbjct: 379 CSCNDGYEMDGENRCSPVCSGGCKNGF--CVAPGKCS-CDEGYSKETG---NSCKPI-CS 431
Query: 299 DPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCG 358
+NG C E C+ + G +++ P SGG F P + C
Sbjct: 432 KGCENGFC-DAPEKCSCNDGYEMDSENRCSPVC--SGGCKN--GFC-VAPG-KCSCDEGY 484
Query: 359 NHTTGPKCED-CVEGKEN 375
+ TG C+ C +G EN
Sbjct: 485 SKETGNSCKPICSKGCEN 502
Score = 160 (61.4 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 47/140 (33%), Positives = 65/140 (46%)
Query: 189 LNDHHTCDPQ-SEQCVD---LADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDK 244
++ + C P S C + +A G +C C GY++ E G C P+CS+GC G C P+K
Sbjct: 783 MDGENRCSPVCSGGCKNGFCIAPG-KCSCDEGYSR-ETGNSCKPICSKGCENGFCDAPEK 840
Query: 245 CQCDFGYV--GVN-CSIQCQ--C-NGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVG 298
C C+ GY N CS C C NG C P K C ++K + C P +
Sbjct: 841 CSCNDGYEMDSENRCSPVCSGGCKNGF--CVAPGK---CSCDEGYSKETEIS-CAP-FCK 893
Query: 299 DPRDNGECVPCSEYCNGHTG 318
D NG CV ++C G
Sbjct: 894 DGCVNGLCVS-PDFCKCDDG 912
Score = 149 (57.5 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 53/172 (30%), Positives = 72/172 (41%)
Query: 210 ECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGY--VGVN-CSIQCQ--CNG 264
+C C + Y K +G CVP+C GCV G C+ PD CQC GY +G N C C C
Sbjct: 214 KCECNKFYEKDIDGN-CVPICENGCVNGNCTAPDVCQCLTGYTKIGHNVCLAVCPEGCQN 272
Query: 265 HADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLCINAS 324
C P++ C + +G C P+ D NG C E C+ + G +++
Sbjct: 273 GV-CVAPNECS-CNAGYTKLEGV----CTPV-CKDGCVNGFCAS-PEKCSCNDGYEMDSE 324
Query: 325 LASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCED-CVEGKEN 375
P SGG F P + C TG C+ C +G EN
Sbjct: 325 NRCSPVC--SGGCKN--GFC-VAPG-KCSCDEGYIKGTGNSCKPICSKGCEN 370
Score = 148 (57.2 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 54/167 (32%), Positives = 73/167 (43%)
Query: 171 NNDSFSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGF-----ECVCGRGY--NKSEEG 223
NN S + Y P CL TC + C + +GF C C G+ +
Sbjct: 141 NNCSCNKGYKLNPTTQVCLP---TC---KDNCAAV-NGFCAAPNRCECNPGFIPKPKSKS 193
Query: 224 GECVPVCSQGCVRGVCSEPDKCQCDFGY---VGVNCSIQCQCNG--HADCAGPDKLDVCL 278
EC P C GC GVC PDKC+C+ Y + NC C+ NG + +C PD VC
Sbjct: 194 FECQPKCKNGCSNGVCRAPDKCECNKFYEKDIDGNCVPICE-NGCVNGNCTAPD---VCQ 249
Query: 279 RCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEY-CN-GHT---GLC 320
+TK + C + + NG CV +E CN G+T G+C
Sbjct: 250 CLTGYTKIGH-NVCLAV-CPEGCQNGVCVAPNECSCNAGYTKLEGVC 294
Score = 134 (52.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 37/139 (26%), Positives = 56/139 (40%)
Query: 184 PENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPD 243
P N C+ C + Q + G C+C + + C+P C+ GC G C P+
Sbjct: 87 PSNRCVPYCKGCSRGTCQ----SPG-RCICSARHLLDKTTNNCIPQCASGCPNGTCITPN 141
Query: 244 KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDN 303
C C+ GY +N + Q C P D C + P +C P ++ P+
Sbjct: 142 NCSCNKGYK-LNPTTQV-------CL-PTCKDNCAAVNGFCAAPNRCECNPGFIPKPKSK 192
Query: 304 G-ECVP-CSEYCNGHTGLC 320
EC P C C+ G+C
Sbjct: 193 SFECQPKCKNGCSN--GVC 209
>ZFIN|ZDB-GENE-041014-220 [details] [associations]
symbol:si:ch211-221n20.8 "si:ch211-221n20.8"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-041014-220 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 PROSITE:PS00010 InterPro:IPR026823
Pfam:PF12662 Pfam:PF12661 GeneTree:ENSGT00700000104291
EMBL:AL929003 EMBL:BX005301 IPI:IPI00515869
ProteinModelPortal:F1QA64 Ensembl:ENSDART00000057960 Uniprot:F1QA64
Length = 737
Score = 159 (61.0 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 38/118 (32%), Positives = 53/118 (44%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYN-KSEEGGECVPVCSQGCVR-GVC 239
C +EC++ + C+ + CV+ A GF C C G+ + + +C P+C C GVC
Sbjct: 433 CIDVDECVSVNGGCE---QVCVNHAGGFNCSCRAGFELRKDHPTKCQPLCDPACQNSGVC 489
Query: 240 SEPDKCQCDFGYVGVNCSIQCQ--CNGHADCAGPDKLDVCLRCHNHTKGPQCDK--CE 293
P+ C C GY G CS C C C + +VCL C G C CE
Sbjct: 490 VAPNTCDCPAGYPGAGCSAMCSPPCAHGGSCM---RWNVCL-CSPGWTGEGCHTAVCE 543
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 42/153 (27%), Positives = 62/153 (40%)
Query: 178 NYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG-- 233
N C NECL+ H CD + +C ++ + C C +GY S +G C V C+Q
Sbjct: 223 NGTHCTDINECLSGDHGCDVNA-RCGNIMGSYFCQCHQGY--SGDGHACYDVDECTQDNR 279
Query: 234 -CVRGVCSEPDK--CQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGP--- 287
C ++P CQC GY + + C +C + D C + +T G
Sbjct: 280 LCEHTCTNQPGSYSCQCSAGYT-ITADLH-NCTDVDECVSSN--DRCEQTCTNTAGSFLC 335
Query: 288 QCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLC 320
C + L++ D CV E C G C
Sbjct: 336 SCRRGFQLHI----DGHSCVDIDE-CKLQNGGC 363
Score = 121 (47.7 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 42/127 (33%), Positives = 57/127 (44%)
Query: 178 NYVKCPPEN---ECLNDHHTCDP---QSEQCVDLADGFECVCG-RGYNKSEEGGECVPVC 230
N +CP + +CL C P +CV + + C+ G RG E CVP C
Sbjct: 556 NTCQCPSDYSGPQCLTPQ--CSPPCVNGGRCVAI-NTCSCLDGWRGARCQIEPVRCVPAC 612
Query: 231 SQGCVRGVCSEPDKCQCDFGYVGVNCSIQ----C--QCNGHADCAGPDKLDVCLRCHNHT 284
+ G GVC ++CQC GY G +C C C A CA P L+ C+ C T
Sbjct: 613 NNG---GVCVGLNRCQCVEGYTGKHCETALVTPCVPPCQHGAVCA-P--LNSCV-CPKGT 665
Query: 285 KGPQCDK 291
G +C+K
Sbjct: 666 SGIRCEK 672
Score = 107 (42.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 48/168 (28%), Positives = 70/168 (41%)
Query: 211 CVCGRGYNKSEEGGEC-VPVCSQGCVRGV-CSEPDKCQCDFGYVGVNC-SIQCQ--CNGH 265
C+C G+ + EG C VC C G C P+ CQC Y G C + QC C
Sbjct: 526 CLCSPGW--TGEG--CHTAVCELPCANGGRCIAPNTCQCPSDYSGPQCLTPQCSPPCVNG 581
Query: 266 ADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGE-CVPCSE-YC-NGHTGLCIN 322
C ++ C C + +G +C + EP+ +NG CV + C G+TG
Sbjct: 582 GRCVA---INTC-SCLDGWRGARC-QIEPVRCVPACNNGGVCVGLNRCQCVEGYTGKHCE 636
Query: 323 ASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCV 370
+L + P G + A L+ C+ C T+G +CE V
Sbjct: 637 TALVTPCVPPCQHGA--VCAPLNS-------CV-CPKGTSGIRCEKLV 674
Score = 61 (26.5 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 21/74 (28%), Positives = 32/74 (43%)
Query: 41 PLRCDQRTDCQD------CLTSSGGEGGWHECRWSSMLNECISPSYEALYC-AGGVCGLV 93
P CD R DC++ C+ G G C + +NEC+S + C CG +
Sbjct: 196 PHLCDGRGDCENTLGSYRCVCQRGYRGNGTHC---TDINECLSGDHG---CDVNARCGNI 249
Query: 94 LGPHQAPQCPRSCS 107
+G + QC + S
Sbjct: 250 MGSYFC-QCHQGYS 262
>FB|FBgn0039528 [details] [associations]
symbol:dsd "distracted" species:7227 "Drosophila
melanogaster" [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008039 "synaptic
target recognition" evidence=IMP] InterPro:IPR000742
InterPro:IPR015915 PROSITE:PS50026 SMART:SM00181 EMBL:AE014297
GO:GO:0016021 InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
PROSITE:PS01186 InterPro:IPR002049 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 OMA:MVVIFGH FlyBase:FBgn0039528
RefSeq:NP_651571.3 UniGene:Dm.7161 ProteinModelPortal:Q9VB20
SMR:Q9VB20 MINT:MINT-977402 STRING:Q9VB20
EnsemblMetazoa:FBtr0301390 GeneID:43315 KEGG:dme:Dmel_CG5634
UCSC:CG5634-RA CTD:43315 InParanoid:Q9VB20 PhylomeDB:Q9VB20
GenomeRNAi:43315 NextBio:833301 ArrayExpress:Q9VB20 Bgee:Q9VB20
Uniprot:Q9VB20
Length = 1323
Score = 133 (51.9 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 36/109 (33%), Positives = 47/109 (43%)
Query: 213 CGRGYNKSEEG-GECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGP 271
CG N S G G CV V G + D +C + +C CNGH+ C
Sbjct: 908 CGWCDNGSNTGLGRCV-------VGGALAPYDDTECALKHWFFTSCPRCNCNGHSYCN-- 958
Query: 272 DKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLC 320
D+ C+N T G C+KC Y G+P + G+C C CNG C
Sbjct: 959 DQQHCEQPCNNLTTGAHCEKCRTGYWGNPINGGKCQRCD--CNGQGVYC 1005
Score = 90 (36.7 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 37/130 (28%), Positives = 47/130 (36%)
Query: 4 CRHLYGMSGQVAYTLEPRTVKTDANRTNIKLKTGSSCPLR--------CDQRTDCQDCLT 55
CR M+ + V T + N K SCP+ CDQ +C+ C
Sbjct: 728 CRETTSMASVFFESSTQMAVSTASPPLNAKHL--DSCPISEEYLVSSVCDQLHNCRACSA 785
Query: 56 SSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQAP-QCPRSCSAYTQCST 114
+ CRW S N C S Y + G GL L Q C SC++ T C
Sbjct: 786 NLA-------CRWDSEHNRCKS------YTSYG--GLALNRTQDEVACSPSCASLTNCQN 830
Query: 115 CLRHAHCGWC 124
C C WC
Sbjct: 831 CTED-ECIWC 839
Score = 88 (36.0 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 32/114 (28%), Positives = 46/114 (40%)
Query: 27 ANRTNIKLKTGSSCPLRCDQRTDCQD--CLTSSGGEGGWHECR-WSSMLNECISPSYEAL 83
A+ TN + T C + C C D T+S G +CR W++ +C S ++
Sbjct: 823 ASLTNCQNCTEDEC-IWCQNEQRCVDRNAYTASFPYG---QCREWTTFTAKCRSAPIQST 878
Query: 84 YCAGGVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVC 137
L +G A + C Y C CL CGWC +T G+G C
Sbjct: 879 -------ALAVGSTTALSSAQ-CGYYNSCQMCLDDPACGWCDNGSNT--GLGRC 922
Score = 83 (34.3 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 30/103 (29%), Positives = 40/103 (38%)
Query: 211 CVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVG--VN---CSIQCQCNGH 265
C C G++ + C C+ C +KC+ GY G +N C +C CNG
Sbjct: 949 CNCN-GHSYCNDQQHCEQPCNNLTTGAHC---EKCRT--GYWGNPINGGKCQ-RCDCNGQ 1001
Query: 266 ADCAGPDKLDVCLRCHNHTKGPQCDKCEPL--YVGDPRDNGEC 306
PD C G C+KC+ Y GDP G C
Sbjct: 1002 GVYCHPDT-GKCFCTTKGIVGDHCEKCDSQNHYHGDPL-KGSC 1042
Score = 63 (27.2 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 64 HECRWSSMLNECISPSYEALYCAGGVC 90
H C+ + C+S ++ YC GVC
Sbjct: 697 HRCQELASCQSCVSTAFGCTYCGNGVC 723
Score = 47 (21.6 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 22/90 (24%), Positives = 32/90 (35%)
Query: 43 RCDQRTDCQDCL-TSSG----GEG--GWHECRWSSMLNECISPSYEALYCAGGVCGLVLG 95
RC + CQ C+ T+ G G G CR ++ + S + A L
Sbjct: 698 RCQELASCQSCVSTAFGCTYCGNGVCSKERCRETTSMASVFFESSTQM--AVSTASPPLN 755
Query: 96 PHQAPQCPRSCSAYTQCSTCLRHAHCGWCA 125
CP S Y S C + +C C+
Sbjct: 756 AKHLDSCPIS-EEYLVSSVCDQLHNCRACS 784
>FB|FBgn0003390 [details] [associations]
symbol:shf "shifted" species:7227 "Drosophila melanogaster"
[GO:0050821 "protein stabilization" evidence=IMP] [GO:0005578
"proteinaceous extracellular matrix" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IMP] [GO:0007224 "smoothened signaling pathway"
evidence=IGI;IMP] [GO:0008589 "regulation of smoothened signaling
pathway" evidence=IMP] [GO:0005576 "extracellular region"
evidence=IDA] [GO:0008039 "synaptic target recognition"
evidence=IMP] [GO:0045880 "positive regulation of smoothened
signaling pathway" evidence=IMP] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 InterPro:IPR003306 GO:GO:0007275 GO:GO:0050821
EMBL:AE014298 GO:GO:0005578 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 GO:GO:0007224 Pfam:PF12661 GO:GO:0045880
Pfam:PF02019 ProDom:PD013948 PROSITE:PS50814 CTD:90525
GeneTree:ENSGT00660000095436 eggNOG:NOG328460 KO:K01691
EMBL:AY051622 RefSeq:NP_572349.1 UniGene:Dm.58
ProteinModelPortal:Q9W3W5 SMR:Q9W3W5 STRING:Q9W3W5
EnsemblMetazoa:FBtr0070978 GeneID:31617 KEGG:dme:Dmel_CG3135
UCSC:CG3135-RA FlyBase:FBgn0003390 InParanoid:Q9W3W5 OMA:YCETAFC
OrthoDB:EOG46WWQP PhylomeDB:Q9W3W5 ChiTaRS:SHF GenomeRNAi:31617
NextBio:774508 Bgee:Q9W3W5 GermOnline:CG3135 Uniprot:Q9W3W5
Length = 456
Score = 148 (57.2 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 38/112 (33%), Positives = 49/112 (43%)
Query: 211 CVCGRGYNKSE-EGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSI-QC--QCNGHA 266
C C GY ++ EGG C C G G C + DKCQC GY G+ C +C C
Sbjct: 331 CTCPEGYQGTQCEGGICKDKCLNG---GKCIQKDKCQCSKGYYGLRCEYSKCVIPCKNEG 387
Query: 267 DCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTG 318
C G + +C RC N +G C+ NG CV ++C H G
Sbjct: 388 RCIGNN---LC-RCPNGLRGDHCEIGRKQRSICKCRNGTCVS-HKHCKCHPG 434
Score = 60 (26.2 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 22/80 (27%), Positives = 33/80 (41%)
Query: 26 DANRTN-IKLKTGSSCPLRCDQRTDCQD---CLTSSGGEGGWHECRWS--SMLN--ECIS 77
D + +N L T C L+C + C + C + G G + E + LN C +
Sbjct: 268 DIDASNPTSLTTLQECSLKCGKNGYCNEHHICKCNVGYTGQYCETAFCFPQCLNGGNCTA 327
Query: 78 PS-------YEALYCAGGVC 90
PS Y+ C GG+C
Sbjct: 328 PSVCTCPEGYQGTQCEGGIC 347
>UNIPROTKB|F1NJR4 [details] [associations]
symbol:FBN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR011398
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 InterPro:IPR000152 GO:GO:0005578 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS01186 PROSITE:PS00010
InterPro:IPR026823 Pfam:PF12662 GO:GO:0005201 InterPro:IPR024731
Pfam:PF12947 GeneTree:ENSGT00700000104076 Gene3D:3.90.290.10
InterPro:IPR017878 PANTHER:PTHR24039:SF0 Pfam:PF00683
SUPFAM:SSF57581 PROSITE:PS51364 EMBL:AADN02045220 EMBL:AADN02045221
EMBL:AADN02045222 EMBL:AADN02045223 EMBL:AADN02045224
EMBL:AADN02045225 EMBL:AADN02045226 EMBL:AADN02045227
EMBL:AADN02045228 EMBL:AADN02045229 EMBL:AADN02045230
EMBL:AADN02045231 EMBL:AADN02045232 EMBL:AADN02045233
EMBL:AADN02045234 EMBL:AADN02045235 EMBL:AADN02045236
IPI:IPI00821611 Ensembl:ENSGALT00000038875 ArrayExpress:F1NJR4
Uniprot:F1NJR4
Length = 658
Score = 164 (62.8 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 49/167 (29%), Positives = 78/167 (46%)
Query: 174 SFSW--NYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV-- 229
S W N +KC +EC N H C P ++ C + + C+C GY + +G C +
Sbjct: 324 SSGWIGNGIKCTDLDECSNGTHKCSPHAD-CKNTMGSYRCLCKEGY--TGDGFTCTDLDE 380
Query: 230 CSQG---CVRGVC-SEPD--KCQCDFGYVGVNCSIQCQ-CNGHADCAGPDKLDVCL--RC 280
CS+ C G C + P +C+CD G++ S+ + C +C+ P+ +C+ C
Sbjct: 381 CSENLNLCENGQCLNAPGGYRCECDMGFLP---SLDGKACEDIDECSLPN---ICVYGTC 434
Query: 281 HNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHT---GLCINAS 324
HN +C+ CE Y D R G C +E + T G C+N +
Sbjct: 435 HNLPGLFRCE-CEVGYELD-RSGGNCTDVNECADPTTCISGTCVNTA 479
Score = 131 (51.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 54/206 (26%), Positives = 79/206 (38%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG---CVR 236
C +EC ++ + CD QC ++ + C+C G+ SE+ CV V C C+
Sbjct: 209 CTDIDECEDNPNICD--GGQCTNIPGEYRCLCYDGFMASEDMKTCVDVNECDLHPNICLS 266
Query: 237 GVCSEPDK---CQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCE 293
G C C CD GY G + C + G D C N +C C
Sbjct: 267 GTCENTKGSFICHCDMGYSGKKGTTGCTDINECEI-GAHNCDRHAVCTNIPGSFKCS-CS 324
Query: 294 PLYVGDP---RDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSE--LAAFLDEGP 348
++G+ D EC + C+ H C N ++ S + G T + LDE
Sbjct: 325 SGWIGNGIKCTDLDECSNGTHKCSPHAD-CKN-TMGSYRCLCKEGYTGDGFTCTDLDECS 382
Query: 349 TTRARCMH--CGNHTTGPKCEDCVEG 372
C + C N G +CE C G
Sbjct: 383 ENLNLCENGQCLNAPGGYRCE-CDMG 407
Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
Identities = 51/195 (26%), Positives = 81/195 (41%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG--CVRG 237
C +EC + + C+ + QC++ G+ C C G+ S +G C + CS CV G
Sbjct: 375 CTDLDECSENLNLCE--NGQCLNAPGGYRCECDMGFLPSLDGKACEDIDECSLPNICVYG 432
Query: 238 VCSE-PD--KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEP 294
C P +C+C+ GY ++ S C +CA P + C N T G +C P
Sbjct: 433 TCHNLPGLFRCECEVGYE-LDRS-GGNCTDVNECADPTTC-ISGTCVN-TAGSYTCECPP 488
Query: 295 LYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARC 354
+ +P G CV + +G C + ++GGT + + G + + C
Sbjct: 489 DFELNPTRVG-CV------DTRSGNCY----LDIKTRGDNGGTF-CSNEIGVGVSKASCC 536
Query: 355 MHCGNHTTGPKCEDC 369
G G CE C
Sbjct: 537 CSLGR-AWGVPCEQC 550
>UNIPROTKB|F1NJ23 [details] [associations]
symbol:LAMB1 "Laminin subunit beta-1" species:9031 "Gallus
gallus" [GO:0005178 "integrin binding" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0007162 "negative
regulation of cell adhesion" evidence=IEA] [GO:0007566 "embryo
implantation" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0030335 "positive regulation of cell migration" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0034446 "substrate adhesion-dependent cell spreading"
evidence=IEA] [GO:0042476 "odontogenesis" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] GO:GO:0048471 GO:GO:0005615 GO:GO:0016477
GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005201
GO:GO:0043208 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005606 GO:GO:0043259
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:NTWQLAS EMBL:AADN02036854 EMBL:AADN02036852 EMBL:AADN02036853
IPI:IPI00586930 Ensembl:ENSGALT00000012832 ArrayExpress:F1NJ23
Uniprot:F1NJ23
Length = 1782
Score = 169 (64.5 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 51/149 (34%), Positives = 65/149 (43%)
Query: 181 KCPPENECLNDHHTCDPQSEQCVDLAD--GFECV-CGRGYNKSEEGGECVPV-CS-QGCV 235
+C P+ + CDP QC + G +C C G G C P C +G
Sbjct: 766 QCDPQGSLSS---VCDPSGGQCQCRPNVVGRQCNRCAPGTFGFGPSG-CRPCECHLRGSY 821
Query: 236 RGVC-SEPDKCQCDFGYVGVNC-----------SIQ-CQCNGHADCAGPDKLDVCLRCHN 282
C +E +C C G G C S Q C CNGHAD P + CL C +
Sbjct: 822 NSFCDAETGQCHCFPGVYGRQCDRCLPGFWGFPSCQPCHCNGHADDCSPYTGE-CLHCRD 880
Query: 283 HTKGPQCDKCEPLYVGDP-RDNGE-CVPC 309
HT GP C++CE Y GDP +G+ C PC
Sbjct: 881 HTAGPNCERCEAGYYGDPILGSGDHCRPC 909
>UNIPROTKB|F1NJR3 [details] [associations]
symbol:FBN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR011398
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 InterPro:IPR000152 GO:GO:0005578 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS01186 PROSITE:PS00010
InterPro:IPR026823 Pfam:PF12662 GO:GO:0005201 InterPro:IPR024731
Pfam:PF12947 GeneTree:ENSGT00700000104076 Gene3D:3.90.290.10
InterPro:IPR017878 PANTHER:PTHR24039:SF0 Pfam:PF00683
SUPFAM:SSF57581 PROSITE:PS51364 EMBL:AADN02045220 EMBL:AADN02045221
EMBL:AADN02045222 EMBL:AADN02045223 EMBL:AADN02045224
EMBL:AADN02045225 EMBL:AADN02045226 EMBL:AADN02045227
EMBL:AADN02045228 EMBL:AADN02045229 EMBL:AADN02045230
EMBL:AADN02045231 EMBL:AADN02045232 EMBL:AADN02045233
EMBL:AADN02045234 EMBL:AADN02045235 EMBL:AADN02045236
IPI:IPI01017395 Ensembl:ENSGALT00000038877 ArrayExpress:F1NJR3
Uniprot:F1NJR3
Length = 708
Score = 164 (62.8 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 49/167 (29%), Positives = 78/167 (46%)
Query: 174 SFSW--NYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV-- 229
S W N +KC +EC N H C P ++ C + + C+C GY + +G C +
Sbjct: 374 SSGWIGNGIKCTDLDECSNGTHKCSPHAD-CKNTMGSYRCLCKEGY--TGDGFTCTDLDE 430
Query: 230 CSQG---CVRGVC-SEPD--KCQCDFGYVGVNCSIQCQ-CNGHADCAGPDKLDVCL--RC 280
CS+ C G C + P +C+CD G++ S+ + C +C+ P+ +C+ C
Sbjct: 431 CSENLNLCENGQCLNAPGGYRCECDMGFLP---SLDGKACEDIDECSLPN---ICVYGTC 484
Query: 281 HNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHT---GLCINAS 324
HN +C+ CE Y D R G C +E + T G C+N +
Sbjct: 485 HNLPGLFRCE-CEVGYELD-RSGGNCTDVNECADPTTCISGTCVNTA 529
Score = 131 (51.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 54/206 (26%), Positives = 79/206 (38%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG---CVR 236
C +EC ++ + CD QC ++ + C+C G+ SE+ CV V C C+
Sbjct: 259 CTDIDECEDNPNICD--GGQCTNIPGEYRCLCYDGFMASEDMKTCVDVNECDLHPNICLS 316
Query: 237 GVCSEPDK---CQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCE 293
G C C CD GY G + C + G D C N +C C
Sbjct: 317 GTCENTKGSFICHCDMGYSGKKGTTGCTDINECEI-GAHNCDRHAVCTNIPGSFKCS-CS 374
Query: 294 PLYVGDP---RDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSE--LAAFLDEGP 348
++G+ D EC + C+ H C N ++ S + G T + LDE
Sbjct: 375 SGWIGNGIKCTDLDECSNGTHKCSPHAD-CKN-TMGSYRCLCKEGYTGDGFTCTDLDECS 432
Query: 349 TTRARCMH--CGNHTTGPKCEDCVEG 372
C + C N G +CE C G
Sbjct: 433 ENLNLCENGQCLNAPGGYRCE-CDMG 457
Score = 122 (48.0 bits), Expect = 0.00028, P = 0.00028
Identities = 51/195 (26%), Positives = 81/195 (41%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG--CVRG 237
C +EC + + C+ + QC++ G+ C C G+ S +G C + CS CV G
Sbjct: 425 CTDLDECSENLNLCE--NGQCLNAPGGYRCECDMGFLPSLDGKACEDIDECSLPNICVYG 482
Query: 238 VCSE-PD--KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEP 294
C P +C+C+ GY ++ S C +CA P + C N T G +C P
Sbjct: 483 TCHNLPGLFRCECEVGYE-LDRS-GGNCTDVNECADPTTC-ISGTCVN-TAGSYTCECPP 538
Query: 295 LYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARC 354
+ +P G CV + +G C + ++GGT + + G + + C
Sbjct: 539 DFELNPTRVG-CV------DTRSGNCY----LDIKTRGDNGGTF-CSNEIGVGVSKASCC 586
Query: 355 MHCGNHTTGPKCEDC 369
G G CE C
Sbjct: 587 CSLGR-AWGVPCEQC 600
>ZFIN|ZDB-GENE-021226-1 [details] [associations]
symbol:lamb1a "laminin, beta 1a" species:7955 "Danio
rerio" [GO:0007634 "optokinetic behavior" evidence=IMP] [GO:0050908
"detection of light stimulus involved in visual perception"
evidence=IMP] [GO:0007517 "muscle organ development" evidence=IMP]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP]
ZFIN:ZDB-GENE-021226-1 GO:GO:0048471 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0007517 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 HSSP:P02468
GO:GO:0050908 GO:GO:0031290 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GO:GO:0007634 HOGENOM:HOG000007552
KO:K05636 InterPro:IPR013015 PROSITE:PS51116 HOVERGEN:HBG052301
EMBL:AF468049 IPI:IPI00485526 RefSeq:NP_775382.1 UniGene:Dr.76526
ProteinModelPortal:Q8JHV7 STRING:Q8JHV7 PRIDE:Q8JHV7 GeneID:286830
KEGG:dre:286830 CTD:286830 NextBio:20806481 Bgee:Q8JHV7
Uniprot:Q8JHV7
Length = 1785
Score = 168 (64.2 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 70/216 (32%), Positives = 88/216 (40%)
Query: 181 KCPPENECLNDHHTCDPQSEQCVDLAD--GFECV-CGRGYNKSEEGGECVPV-CS-QGCV 235
+C P+ CDP QC + G C C G C P CS +G V
Sbjct: 770 QCDPQGSLST---VCDPSGGQCQCRPNVVGRNCDRCAPATFLFXPQG-CRPCDCSPEGSV 825
Query: 236 RGVCSEPD-KC---------QCDF---GYVGV-NCSIQCQCNGHADCAGPDKLDVCLRCH 281
C E +C QCD GY G NC C CNGHA+ P + CL C
Sbjct: 826 HSYCHEATGQCECIAGAYGRQCDRCLPGYWGFPNCR-PCTCNGHAEQCDP-QTGQCLSCR 883
Query: 282 NHTKGPQCDKCEPLYVGDP-RDNGE-CVPCSEYCNGHTGLCINASLASLPFSPESGGTSE 339
+HT G C++C Y GDP +G+ C PC C G S A SP+S S+
Sbjct: 884 DHTTGHNCERCLGGYYGDPVLGSGDHCRPCM--CPDGPGSGRQFSGACYK-SPDS---SQ 937
Query: 340 LAAFLDEGPTTRARCMHC-----GN-HTTGPKCEDC 369
+ ++G ARC C GN H G +C C
Sbjct: 938 VFCVCNQG-YKGARCEECAPGYYGNPHEVGGECRPC 972
Score = 126 (49.4 bits), Expect = 0.00031, P = 0.00031
Identities = 55/193 (28%), Positives = 69/193 (35%)
Query: 191 DHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFG 250
DH C P C D G Y KS + + VC+QG C E C G
Sbjct: 908 DH--CRPC--MCPDGPGSGRQFSGACY-KSPDSSQVFCVCNQGYKGARCEE-----CAPG 957
Query: 251 Y------VGVNCSIQCQCNGHADCAGPDKLDV----CLRCHNHTKGPQCDKCEPLYVGDP 300
Y VG C CQCN + D P+ D C++C HT+G C++C Y G+
Sbjct: 958 YYGNPHEVGGECR-PCQCNSNIDMMDPESCDARTGACVKCLYHTEGESCNRCRLGYYGNA 1016
Query: 301 RDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCG-- 358
C C CN G + P + TS L C C
Sbjct: 1017 LTQS-CRKC--VCN-QMGTV--EEMCPSPGNCNCDLTSGQCLCLPN--VVGQHCDQCAPD 1068
Query: 359 --NHTTGPKCEDC 369
N +G CEDC
Sbjct: 1069 TWNMASGKGCEDC 1081
>UNIPROTKB|E2R4J1 [details] [associations]
symbol:LAMB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0072274 "metanephric glomerular basement
membrane development" evidence=IEA] [GO:0072249 "metanephric
glomerular visceral epithelial cell development" evidence=IEA]
[GO:0060041 "retina development in camera-type eye" evidence=IEA]
[GO:0048677 "axon extension involved in regeneration" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0014044 "Schwann cell
development" evidence=IEA] [GO:0014002 "astrocyte development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0007528 "neuromuscular junction development" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0005608 "laminin-3
complex" evidence=IEA] [GO:0005178 "integrin binding" evidence=IEA]
GO:GO:0007411 GO:GO:0007528 GO:GO:0007601 GO:GO:0060041
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:QPYCIVS GO:GO:0048677 GO:GO:0072274 GO:GO:0072249
EMBL:AAEX03012231 ProteinModelPortal:E2R4J1
Ensembl:ENSCAFT00000018765 Uniprot:E2R4J1
Length = 1803
Score = 168 (64.2 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 47/149 (31%), Positives = 64/149 (42%)
Query: 181 KCPPENECLNDHHTCDPQSEQCV--DLADGFECV-CGRG-YNKSEEGGECVPVCSQGCVR 236
+C P+ ++ C+P QCV G C C G Y G + +G +
Sbjct: 787 QCDPQGSLSSE---CNPHGGQCVCKPAVVGRRCDHCAPGFYGFGPTGCQACQCSPEGALS 843
Query: 237 GVCSEPD-KCQCDFGYVGVNC-----------SIQ-CQCNGHAD-CAGPDKLDVCLRCHN 282
G+C E +C C G G+ C S Q C CNGHAD C C+ C +
Sbjct: 844 GLCEETSGQCPCRTGAFGLRCDRCQRGQWGFPSCQPCVCNGHADEC--DTHTGACVGCRD 901
Query: 283 HTKGPQCDKCEPLYVGDPR--DNGECVPC 309
HT G C++C + GDPR G+C PC
Sbjct: 902 HTGGEHCERCIAGFHGDPRLPYGGQCRPC 930
Score = 131 (51.2 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 55/166 (33%), Positives = 67/166 (40%)
Query: 211 CVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAG 270
C C GY G C C+ G G S PD QC C+CNG+ D
Sbjct: 957 CHCRAGYT----GLRC-EACAPGHF-GDPSRPDG-QCQ----------PCECNGNIDPMD 999
Query: 271 PDKLDV----CLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCN--GHTGLCINAS 324
PD D CLRC HT+GP C C+P + G C C+ CN G T S
Sbjct: 1000 PDACDPRTGQCLRCLYHTEGPHCAHCKPGFYGQAARQS-CHRCT--CNLLG-TDPQQCPS 1055
Query: 325 LASLPFSPESGGTSELAAFLDEGPTTRARCM-HCGNHTTGPKCEDC 369
+ P SG L +GPT RC + N T+G C+ C
Sbjct: 1056 IDRCNCDPSSGQCPCLPNV--QGPTCD-RCAPNFWNLTSGHGCQPC 1098
Score = 55 (24.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 27/96 (28%), Positives = 35/96 (36%)
Query: 50 CQDCLTSSGGEG--GWHECRWS---SMLNECISPSYEALYCAGGVCGLVLGPHQAPQCPR 104
C C G G G C+ S ++ C S + C G GL + +C R
Sbjct: 816 CDHCAPGFYGFGPTGCQACQCSPEGALSGLCEETSGQCP-CRTGAFGL-----RCDRCQR 869
Query: 105 SCSAYTQCSTCL--RHA-----HCGWCALQRDTTGG 133
+ C C+ HA H G C RD TGG
Sbjct: 870 GQWGFPSCQPCVCNGHADECDTHTGACVGCRDHTGG 905
>UNIPROTKB|F1MF28 [details] [associations]
symbol:NTN5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 CTD:126147 OMA:GGPFLLT
EMBL:DAAA02047467 IPI:IPI01001483 RefSeq:NP_001193801.1
UniGene:Bt.48155 Ensembl:ENSBTAT00000061223 GeneID:785970
KEGG:bta:785970 NextBio:20927619 Uniprot:F1MF28
Length = 489
Score = 160 (61.4 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 45/122 (36%), Positives = 54/122 (44%)
Query: 259 QCQCNGHAD-CAGPDKLDVCLRCHNHTKGPQCDKCEPLY------VGDPRDNGECVPCSE 311
+CQC+GHA CA D+ C RC +HT GP C+ C+P + PR C+PCS
Sbjct: 156 RCQCHGHAARCAARDRPPRC-RCRHHTTGPGCESCQPSHRDWPWRPATPRHPHPCLPCS- 213
Query: 312 YCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCV 370
CN H C N+ L L SGG E RC H HT G C C
Sbjct: 214 -CNQHARRCRFNSELFRLS-GGRSGGVCE-------------RCRH---HTAGRHCHYCQ 255
Query: 371 EG 372
G
Sbjct: 256 PG 257
>UNIPROTKB|F1SPT5 [details] [associations]
symbol:LAMB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072274 "metanephric glomerular basement membrane
development" evidence=IEA] [GO:0072249 "metanephric glomerular
visceral epithelial cell development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0048677
"axon extension involved in regeneration" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0014044 "Schwann cell development"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0005608 "laminin-3 complex"
evidence=IEA] [GO:0005178 "integrin binding" evidence=IEA]
GO:GO:0007411 GO:GO:0007528 GO:GO:0007601 GO:GO:0060041
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:QPYCIVS GO:GO:0048677 GO:GO:0072274 GO:GO:0072249 EMBL:CU856115
Ensembl:ENSSSCT00000012455 ArrayExpress:F1SPT5 Uniprot:F1SPT5
Length = 1642
Score = 165 (63.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 47/150 (31%), Positives = 65/150 (43%)
Query: 181 KCPPENECLNDHHTCDPQSEQCV--DLADGFEC-VCGRGYNKSEEGGECVPVCS-QGCVR 236
+C P+ ++ C+P QC+ G C +C GY G CS +G +
Sbjct: 786 QCDPQGSLSSE---CNPHGGQCLCKPAVVGRRCNICAPGYYGFGPTGCQACQCSPEGALS 842
Query: 237 GVCSEPD-KCQCDFGYVGVNCSIQCQ-------------CNGHAD-CAGPDKLDVCLRCH 281
G+C +C C G G+ C +CQ CNGHAD C CL C
Sbjct: 843 GLCEATSGQCPCRTGAFGLRCD-RCQRGQWGFPSCRPCVCNGHADEC--DTHTGTCLGCR 899
Query: 282 NHTKGPQCDKCEPLYVGDPR--DNGECVPC 309
+HT G C++C + GDPR G+C PC
Sbjct: 900 DHTGGEHCERCIAGFHGDPRLPYGGQCRPC 929
>RGD|628777 [details] [associations]
symbol:Ush2a "Usher syndrome 2A (autosomal recessive, mild)"
species:10116 "Rattus norvegicus" [GO:0002142 "stereocilia ankle
link complex" evidence=ISO] [GO:0005518 "collagen binding"
evidence=ISO] [GO:0005578 "proteinaceous extracellular matrix"
evidence=NAS] [GO:0005604 "basement membrane" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA;ISO] [GO:0016324 "apical plasma membrane"
evidence=ISO] [GO:0017022 "myosin binding" evidence=ISO]
[GO:0032421 "stereocilium bundle" evidence=ISO] [GO:0045494
"photoreceptor cell maintenance" evidence=ISO] [GO:0048496
"maintenance of organ identity" evidence=ISO] [GO:0050896 "response
to stimulus" evidence=IEA] [GO:0050953 "sensory perception of light
stimulus" evidence=ISO] [GO:0060113 "inner ear receptor cell
differentiation" evidence=ISO] [GO:0060171 "stereocilium membrane"
evidence=ISO] [GO:0001917 "photoreceptor inner segment"
evidence=IDA] [GO:0032391 "photoreceptor connecting cilium"
evidence=IDA] [GO:0043025 "neuronal cell body" evidence=IDA]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
RGD:628777 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0007601
SUPFAM:SSF49265 GO:GO:0005578 GO:GO:0050896 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0007605 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 CTD:7399
eggNOG:NOG245744 InterPro:IPR026915 PANTHER:PTHR10574:SF53
EMBL:AY077844 IPI:IPI00202312 RefSeq:NP_001231686.1
RefSeq:NP_742045.2 UniGene:Rn.200477 ProteinModelPortal:Q8K3K1
STRING:Q8K3K1 PhosphoSite:Q8K3K1 PRIDE:Q8K3K1 GeneID:289369
KEGG:rno:289369 UCSC:RGD:628777 NextBio:629723
Genevestigator:Q8K3K1 Uniprot:Q8K3K1
Length = 1512
Score = 163 (62.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 44/121 (36%), Positives = 56/121 (46%)
Query: 259 QCQCNGHAD-CAGPDKLDVCLRC--HNHTKGPQCDKCEPLYVGDPRDNGE------CVPC 309
+CQC+GHA+ C + CL C H+ T+GPQC +C PLY P +G C PC
Sbjct: 513 RCQCHGHAETCDRTRRPYRCL-CSPHSFTEGPQCGRCSPLYNDKPFRSGNKVHAFNCKPC 571
Query: 310 SEYCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCED 368
C+GH C +AS+ P GG G C C +HTTG CE
Sbjct: 572 Q--CHGHASSCHYDASMDPFPLEYNRGG----------GGV----CDDCQHHTTGRNCES 615
Query: 369 C 369
C
Sbjct: 616 C 616
>UNIPROTKB|D4AA94 [details] [associations]
symbol:Megf6 "Multiple epidermal growth factor-like domains
protein 6" species:10116 "Rattus norvegicus" [GO:0005509 "calcium
ion binding" evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 RGD:621188
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
OrthoDB:EOG4CZBF1 IPI:IPI00776570 ProteinModelPortal:D4AA94
Ensembl:ENSRNOT00000055386 Uniprot:D4AA94
Length = 1193
Score = 137 (53.3 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 48/164 (29%), Positives = 67/164 (40%)
Query: 174 SFSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECV-CGRGYNKSEEGGECV-PV-C 230
S W C C ND H CDP + +C A G+ + C R + G +C+ P C
Sbjct: 713 SAGWYGTGCQIRCACANDGH-CDPTTGRC-SCAPGWTGLSCQRACDSGHWGPDCIHPCNC 770
Query: 231 SQG---C--VRGVCS-----EPDKCQ--CDFGYVGVNCSIQCQCNGHADCAGPDKLDVCL 278
S G C V G+C E +C+ C GY G +C +C+C A C D +
Sbjct: 771 SAGHGNCDAVSGLCLCEAGYEGPRCEQSCRQGYYGPSCEQKCRCEHGAAC---DHVSGAC 827
Query: 279 RCHNHTKGPQCDK-CEPLYVGDPRDNGECVPCSEYCNGHTGLCI 321
C +G C+ C + G D+ C+ TG CI
Sbjct: 828 TCPAGWRGSFCEHACPAGFFGLDCDSACNCSAGAPCDAVTGSCI 871
Score = 115 (45.5 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 49/166 (29%), Positives = 65/166 (39%)
Query: 173 DSFSWNYVKCPPENECLNDHHTCDPQSEQCVDLA--DGFECV--CGRGYNKSEEGGECVP 228
DS W P N C H CD S C+ A +G C C +GY +C
Sbjct: 756 DSGHWGPDCIHPCN-CSAGHGNCDAVSGLCLCEAGYEGPRCEQSCRQGYYGPSCEQKCR- 813
Query: 229 VCSQG--C--VRGVCSEP-----DKCQ--CDFGYVGVNCSIQCQCNGHADCAGPDKLDVC 277
C G C V G C+ P C+ C G+ G++C C C+ A C D +
Sbjct: 814 -CEHGAACDHVSGACTCPAGWRGSFCEHACPAGFFGLDCDSACNCSAGAPC---DAVTGS 869
Query: 278 LRCHNHTKGPQC-DKCEP-LYVGDPRDNGECVPCSEYCNGHTGLCI 321
C GP+C KC P Y + N C+ C+ TG C+
Sbjct: 870 CICPAGRWGPRCAQKCLPGHYAAGCQLNCSCLH-GGICDRLTGHCL 914
Score = 108 (43.1 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 38/135 (28%), Positives = 51/135 (37%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECV-CGRGYNKSEEGGECVPVCSQGCVRGVCS 240
CPP C HH + +C GF + C +G G C +C C+ G
Sbjct: 943 CPPNASC---HHV----TGEC-RCPPGFTGLSCEQGCPSGRYGPGCEHICK--CLNGGTC 992
Query: 241 EP--DKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVG 298
+P C C G++G +CS+ C G GP VC C +G CD +
Sbjct: 993 DPATGACYCPAGFLGADCSLACP-QGRF---GPSCAHVCA-CR---QGAACDPVSGACIC 1044
Query: 299 DPRDNGECVPCSEYC 313
P G V C C
Sbjct: 1045 SPGKTG--VRCEHGC 1057
Score = 101 (40.6 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 56/191 (29%), Positives = 66/191 (34%)
Query: 198 QSEQC-VDLADGF-------ECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDF 249
Q E+C + GF C C G GEC C G C + +C
Sbjct: 573 QGERCQAECESGFFGPGCRHRCTCQPGVACDPVSGECRTQCPPGYQGEDCGQ----ECPV 628
Query: 250 GYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDK-CEPLYVGDPRDNGECVP 308
G GVNCS C C G A C CL C G C C G E P
Sbjct: 629 GTFGVNCSGSCSCVG-APCHRVT--GECL-CPPGKTGEDCGADCPEGRWG--LGCQEICP 682
Query: 309 CSEY---CNGHTGLCINASLASLP-FSPESGGTSELAAFLDEGPTTRARCM---HCGNHT 361
E+ CN TG C+ LP F + A + G R C HC + T
Sbjct: 683 ACEHGASCNPETGTCL-----CLPGFVGSRCQDTCSAGWYGTGCQIRCACANDGHC-DPT 736
Query: 362 TGPKCEDCVEG 372
TG +C C G
Sbjct: 737 TG-RCS-CAPG 745
Score = 97 (39.2 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 41/141 (29%), Positives = 52/141 (36%)
Query: 195 CDPQSEQCVDLAD--GFECVCGRGYNKSEEGGECVPVCSQG--C--VRGVCSEP-----D 243
CDP S C+ G C G ++ +G E C G C G CS P
Sbjct: 1035 CDPVSGACICSPGKTGVRCEHGCPQDRFGKGCELKCACRNGGLCHATNGSCSCPLGWMGP 1094
Query: 244 KCQ--CDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCE---PLYVG 298
C+ C G G C ++C C + C P CL C G C+ CE PL +
Sbjct: 1095 HCEHACPAGRYGAACLLECFCQNNGSCE-PTT-GACL-CGPGFYGQACEHCEWGCPLPLS 1151
Query: 299 DPRDNGECVP-CSEYCNGHTG 318
P +G P C C G
Sbjct: 1152 CP--SGFHGPGCQRVCECQQG 1170
Score = 72 (30.4 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 28/101 (27%), Positives = 38/101 (37%)
Query: 37 GSSCPLRCDQRTDCQDCLTSSGGEGGWHECR--WSSML-NECISPSYEALYCA------- 86
G C L CD DC++ T G+ G +C W+ ++ NE P C+
Sbjct: 412 GHDCSLTCD---DCRNGGTCFPGQDGC-DCPEGWTGIICNETCPPDTFGKNCSSPCTCQN 467
Query: 87 GGVCGLVLGPHQAP------QCPRSCSAYTQCSTCLRHAHC 121
GG C VLG + P C C C + HC
Sbjct: 468 GGTCDPVLGACRCPPGVSGAHCEDGCPKGFYGKHCRKKCHC 508
Score = 52 (23.4 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 17/48 (35%), Positives = 21/48 (43%)
Query: 45 DQRTDCQDCLTSSGGEGGWHEC--RWSSMLNECISPSYEALYCAGGVC 90
DQR D +C +GG H C S L EC P + L+ G C
Sbjct: 51 DQRPDVDECRAHNGG--CQHRCVNTPGSYLCEC-KPGFR-LHTDGRTC 94
Score = 44 (20.5 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 22/84 (26%), Positives = 28/84 (33%)
Query: 37 GSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVC--GLV- 93
G C C T +C S G C + EC+ P + G C G
Sbjct: 619 GEDCGQECPVGTFGVNCSGSCSCVGA--PCH--RVTGECLCPPGKTGEDCGADCPEGRWG 674
Query: 94 LGPHQ-APQCPRSCSAYTQCSTCL 116
LG + P C S + TCL
Sbjct: 675 LGCQEICPACEHGASCNPETGTCL 698
>UNIPROTKB|I3L9D5 [details] [associations]
symbol:NOTCH3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR000742 InterPro:IPR000800
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 Pfam:PF00066
Pfam:PF07645 PRINTS:PR01452 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50258 SMART:SM00004 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0030154 GO:GO:0016020 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186 PROSITE:PS00010
GeneTree:ENSGT00700000104305 SUPFAM:SSF90193 EMBL:CU467692
Ensembl:ENSSSCT00000025522 OMA:VCPRGTE Uniprot:I3L9D5
Length = 1175
Score = 161 (61.7 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 90/370 (24%), Positives = 128/370 (34%)
Query: 36 TGSSCPLRCDQ--RTDCQDCLTSSGGEGGWH-ECRWSSMLNECISPSYEALY--CAGGVC 90
TG C + ++ + C + + GE G+ C S+ C+ PS+ C+ GVC
Sbjct: 513 TGPLCNMEINECASSPCGEGGSCVDGENGFRCLCPPGSLPPLCLPPSHPCAQEPCSHGVC 572
Query: 91 -----GL--VLGPH-QAPQCPRSCSAYTQC--STCLRHAHCGWCALQRDTTGGMGVCTXX 140
G V P PQC R C + C + C HC TG
Sbjct: 573 HDAPGGFRCVCEPGWSGPQCSRQCELLSPCVPNPCEHGGHC------ESATGSFSCTCHE 626
Query: 141 XXXXXXXXXXXXTCD---ILFYQTYPDQVIEVNNNDSFSWNYVKCPPE-NECLNDHHTCD 196
CD L + D V + + + +C + +ECL+ +C
Sbjct: 627 GYSGPSCDQDINDCDPNPCLNGGSCQDGVGSFSCSCLPGFAGPRCARDVDECLSSPCSCF 686
Query: 197 PQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRG-VCS--EPD-KCQCDFGYV 252
CVD F C+C GY + E P S+ C+ G +C+ P +C C G+
Sbjct: 687 -NGGTCVDGVTSFTCLCRPGYTGAHCQHEADPCLSRPCLHGGICTAAHPGFRCACPEGFT 745
Query: 253 GVNCSIQ---CQ---CNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDN-GE 305
G C C C CA CL C G CD + L + G
Sbjct: 746 GAQCQTLVDWCSRVPCQNGGRCARAGASFYCL-CPPGWSGRLCD-IQSLPCREAAAQIG- 802
Query: 306 CVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMH---CGNHTT 362
VP + C G C++ + PE S +D P C H C +
Sbjct: 803 -VPVEQLCQAG-GQCVDKDGSHYCVCPEGRTGSHCEQEVD--PCLAQPCQHGGTCQGYMG 858
Query: 363 GPKCEDCVEG 372
G CE C G
Sbjct: 859 GYVCE-CPAG 867
>UNIPROTKB|E1BDK6 [details] [associations]
symbol:LAMB2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072274 "metanephric glomerular basement membrane
development" evidence=IEA] [GO:0072249 "metanephric glomerular
visceral epithelial cell development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0048677
"axon extension involved in regeneration" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0014044 "Schwann cell development"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0005608 "laminin-3 complex"
evidence=IEA] [GO:0005178 "integrin binding" evidence=IEA]
GO:GO:0007411 GO:GO:0007528 GO:GO:0007601 GO:GO:0060041
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:QPYCIVS GO:GO:0048677 GO:GO:0072274 GO:GO:0072249
EMBL:DAAA02054428 IPI:IPI00904771 UniGene:Bt.7183
Ensembl:ENSBTAT00000057452 NextBio:20873039 ArrayExpress:E1BDK6
Uniprot:E1BDK6
Length = 1802
Score = 163 (62.4 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 46/149 (30%), Positives = 65/149 (43%)
Query: 181 KCPPENECLNDHHTCDPQSEQC--VDLADGFEC-VCGRGYNKSEEGGECVPVCS-QGCVR 236
+C P+ ++ C+P QC G C +C GY G CS +G +
Sbjct: 788 QCDPQGSLSSE---CNPHGGQCRCKPAVVGRRCDLCAPGYYGFGPTGCQACQCSPEGALS 844
Query: 237 GVCSEPD-KCQCDFGYVGVNCSIQCQ-------------CNGHADCAGPDKLDVCLRCHN 282
G+C +C C G G+ C +CQ C+GHAD P+ CL C +
Sbjct: 845 GLCDATSGQCPCRAGAFGLRCD-RCQRGQWGFPSCRPCVCHGHADECDPNT-GTCLGCRD 902
Query: 283 HTKGPQCDKCEPLYVGDPR--DNGECVPC 309
HT G C++C + GDPR G+C PC
Sbjct: 903 HTGGEHCERCIAGFHGDPRLPYGGQCRPC 931
Score = 112 (44.5 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 43/138 (31%), Positives = 55/138 (39%)
Query: 191 DHHTCDPQSEQCVDLAD--GFECV-CGRGYNKSEEGGECVP-VCSQGCVRG-VCSE-PDK 244
DH CDP S QC L + G C C + G C P C RG C+E +
Sbjct: 1058 DHCNCDPSSGQCPCLPNVQGLSCDRCAPNFWNLTSGRGCQPCACHPSRARGPACNEFTGQ 1117
Query: 245 CQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKG---PQCDKCEPLYVGDPR 301
C C G+ G CS +CQ H G L C C +G PQC + P
Sbjct: 1118 CHCRAGFGGRTCS-ECQ-ELHW---GDPGLQ-CRACDCDPRGIDTPQCHRSTGHCSCRPG 1171
Query: 302 DNGECVPCSEYCNGHTGL 319
+G V C + G +G+
Sbjct: 1172 VSG--VRCDQCARGFSGV 1187
Score = 59 (25.8 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 27/96 (28%), Positives = 36/96 (37%)
Query: 50 CQDCLTSSGGEG--GWHECRWS---SMLNECISPSYEALYCAGGVCGLVLGPHQAPQCPR 104
C C G G G C+ S ++ C + S + C G GL + +C R
Sbjct: 817 CDLCAPGYYGFGPTGCQACQCSPEGALSGLCDATSGQCP-CRAGAFGL-----RCDRCQR 870
Query: 105 SCSAYTQCSTCLRHAH---C----GWCALQRDTTGG 133
+ C C+ H H C G C RD TGG
Sbjct: 871 GQWGFPSCRPCVCHGHADECDPNTGTCLGCRDHTGG 906
>UNIPROTKB|A6PVP2 [details] [associations]
symbol:PEAR1 "Platelet endothelial aggregation receptor 1"
species:9606 "Homo sapiens" [GO:0001891 "phagocytic cup"
evidence=IEA] [GO:0043654 "recognition of apoptotic cell"
evidence=IEA] InterPro:IPR000742 InterPro:IPR011489 Pfam:PF07546
PROSITE:PS51041 SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0001891 EMBL:AL356104 Pfam:PF12661 GO:GO:0043654
EMBL:AL158169 UniGene:Hs.142003 HGNC:HGNC:33631 IPI:IPI00787779
SMR:A6PVP2 STRING:A6PVP2 Ensembl:ENST00000455314
HOGENOM:HOG000198270 HOVERGEN:HBG069167 Uniprot:A6PVP2
Length = 173
Score = 124 (48.7 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 26/70 (37%), Positives = 36/70 (51%)
Query: 213 CGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQC-------QCNGH 265
C G+ +S G CVP+C+Q CV G C P++CQC G+ G +CS +C QC+
Sbjct: 90 CCHGFYESR--GFCVPLCAQECVHGRCVAPNQCQCVPGWRGDDCSSECAPGMWGPQCDKP 147
Query: 266 ADCAGPDKLD 275
C D
Sbjct: 148 CSCGNNSSCD 157
Score = 40 (19.1 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 91 GLVLGPHQAPQCPRSCSAYTQCSTCLRHAH 120
GL L P P +CS + +T + +H
Sbjct: 14 GLRLAGTLNPSDPNTCSFWESFTTTTKESH 43
>FB|FBgn0261451 [details] [associations]
symbol:trol "terribly reduced optic lobes" species:7227
"Drosophila melanogaster" [GO:0005578 "proteinaceous extracellular
matrix" evidence=NAS] [GO:0005604 "basement membrane" evidence=ISS]
[GO:0055059 "asymmetric neuroblast division" evidence=NAS]
[GO:0045199 "maintenance of epithelial cell apical/basal polarity"
evidence=IMP] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0072347 "response to anesthetic" evidence=IMP]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068
PROSITE:PS50835 SMART:SM00181 SMART:SM00192 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0005811 EMBL:AE014298 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0005604 InterPro:IPR013098
Pfam:PF07679 GO:GO:0045199 GO:GO:0072347 InterPro:IPR009030
SUPFAM:SSF57184 Pfam:PF02210 InterPro:IPR018031 InterPro:IPR000034
Pfam:PF00052 SMART:SM00281 PROSITE:PS51115 UniGene:Dm.14114
GeneID:45320 KEGG:dme:Dmel_CG33950 CTD:45320 FlyBase:FBgn0261451
ChiTaRS:trol GenomeRNAi:45320 NextBio:838006 RefSeq:NP_001027038.2
ProteinModelPortal:Q9W4Y3 SMR:Q9W4Y3 STRING:Q9W4Y3 PRIDE:Q9W4Y3
UCSC:CG33950-RF InParanoid:Q9W4Y3 PhylomeDB:Q9W4Y3
ArrayExpress:Q9W4Y3 Bgee:Q9W4Y3 Uniprot:Q9W4Y3
Length = 4629
Score = 130 (50.8 bits), Expect = 3.6e-08, Sum P(3) = 3.6e-08
Identities = 46/156 (29%), Positives = 66/156 (42%)
Query: 230 CSQGCVRGVCSEPDKCQCDFG-YVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQ 288
C Q C G +P+ G Y+G+ C C+CNGH+ D D C C ++T+GP
Sbjct: 2440 CEQ-CAPGYARDPEG-----GIYLGL-CR-PCECNGHSKYCNSDTGD-CEECSDNTEGPS 2490
Query: 289 CDKCEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGG-TSELAAFLD-E 346
C++C YVGD G C G+ +P P G T E A+ E
Sbjct: 2491 CERCAAGYVGDAT-RGTIYDCQPD-EGYP----------IPSPPAPGNQTLECTAYCQIE 2538
Query: 347 GP-TTRAR-CMHCGNHTTGPKCEDCVEGKENRQSRN 380
G R C+ C + G +C+ C G ++N
Sbjct: 2539 GIYDCRGNECL-CKRNVIGDQCDQCRPGTYGLSAQN 2573
Score = 126 (49.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 48/153 (31%), Positives = 64/153 (41%)
Query: 182 CPPENECLNDHHT-CDPQS---EQCVDLADGFECV-CGRGYNKSEEGG---ECVPVCSQG 233
C P EC N H C+ + E+C D +G C C GY G +C P +G
Sbjct: 2460 CRP-CEC-NGHSKYCNSDTGDCEECSDNTEGPSCERCAAGYVGDATRGTIYDCQP--DEG 2515
Query: 234 CVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCE 293
+ S P G + C+ CQ G DC G + CL C + G QCD+C
Sbjct: 2516 YP--IPSPPAP-----GNQTLECTAYCQIEGIYDCRGNE----CL-CKRNVIGDQCDQCR 2563
Query: 294 PLYVGDPRDNGE-CVPCSEYCNGHTGLCINASL 325
P G N + C C YC+G C +A+L
Sbjct: 2564 PGTYGLSAQNQDGCKEC--YCSGLASQCRSAAL 2594
Score = 90 (36.7 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 28/89 (31%), Positives = 37/89 (41%)
Query: 273 KLDVCLRCHNHTKGPQCDKCEPLYVGDPRDN---GECVPCSEYCNGHTGLCINASLASLP 329
+++ C RC G C++C P Y DP G C PC CNGH+ C + +
Sbjct: 2425 EVEQC-RCPEGYLGLSCEQCAPGYARDPEGGIYLGLCRPCE--CNGHSKYCNSDTGDCEE 2481
Query: 330 FSPESGGTS-ELAAFLDEGPTTRARCMHC 357
S + G S E A G TR C
Sbjct: 2482 CSDNTEGPSCERCAAGYVGDATRGTIYDC 2510
Score = 75 (31.5 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 28/111 (25%), Positives = 46/111 (41%)
Query: 178 NYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRG 237
N +C +C++ C+ +++ C D +D E CG + + +G E V +
Sbjct: 1366 NQFRCN-SGQCVSSSVRCNGRTD-CQDSSD--EQNCGHRHTEVSQGLETTGVFTTSTTST 1421
Query: 238 VCSEPDKCQC---DFGYVGVNC-SIQCQCNGHADCA--GPDKLDVCLRCHN 282
P + C F C S+ +CNG DC G D+ D C + N
Sbjct: 1422 TAMTPLRIICPPTSFKCENGPCISLGLKCNGRVDCPYDGSDEAD-CGQISN 1471
Score = 70 (29.7 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 18/55 (32%), Positives = 25/55 (45%)
Query: 159 YQTY-PDQVIE-VNNNDSFSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFEC 211
YQ Y P V E N+ + + N +C N C+ H CD C D++D C
Sbjct: 715 YQVYQPSNVYEKANSQNPCASNQFRCTTSNVCIPLHLRCDG-FYHCNDMSDEKSC 768
Score = 69 (29.3 bits), Expect = 3.6e-08, Sum P(3) = 3.6e-08
Identities = 19/64 (29%), Positives = 28/64 (43%)
Query: 181 KCPPENEC--LNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGV 238
+C EN+C +D +CDP+ + F+C G KS + VP C+ G
Sbjct: 1675 RCDGENDCGDNSDETSCDPEPSGAPCRYNEFQCRSGHCIPKSFQCDN-VPDCTDGTDEVG 1733
Query: 239 CSEP 242
C P
Sbjct: 1734 CMAP 1737
Score = 69 (29.3 bits), Expect = 3.6e-08, Sum P(3) = 3.6e-08
Identities = 22/74 (29%), Positives = 32/74 (43%)
Query: 49 DCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQAPQCPRSCSA 108
D Q C+ ++ G+++CR S CI C G C V G AP C+
Sbjct: 1294 DRQFCINATQQCDGYYDCRDFSDEQNCIGCYANQFRCNNGDC--VSG--SAP-----CNG 1344
Query: 109 YTQCSTCLRHAHCG 122
Y++CS +CG
Sbjct: 1345 YSECSDHSDELNCG 1358
Score = 60 (26.2 bits), Expect = 1.3e-06, Sum P(4) = 1.3e-06
Identities = 14/32 (43%), Positives = 15/32 (46%)
Query: 90 CGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHC 121
C L HQ CP S YT+ C RH HC
Sbjct: 1244 CSLPCPQHQ---CP-SGRCYTESERCDRHRHC 1271
Score = 53 (23.7 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 28/109 (25%), Positives = 40/109 (36%)
Query: 38 SSC-PL--RCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEA-LYCA--GGVCG 91
S C PL +CD DC+D EC+ S + C+ +E YC +C
Sbjct: 995 SQCLPLEKKCDGYADCEDMSDEL-------ECQ--SYTDHCLESEFECDSYCLPRDQLCN 1045
Query: 92 LVLGPHQAPQCPRSCSAYTQCSTCLRHAH-C--GWCALQRDTTGGMGVC 137
+ P C + S C+ C A+ C G C G+ C
Sbjct: 1046 GI------PNC-QDGSDERNCTFCREDAYLCNTGECVADNQRCNGIADC 1087
Score = 52 (23.4 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 9/14 (64%), Positives = 11/14 (78%)
Query: 39 SCPLRCDQRTDCQD 52
S +RC+ RTDCQD
Sbjct: 1377 SSSVRCNGRTDCQD 1390
Score = 48 (22.0 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 21/82 (25%), Positives = 29/82 (35%)
Query: 43 RCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGV-CGLVLGPHQAPQ 101
RCD R DC + + G ++ +W CI+ + L C G + C P
Sbjct: 582 RCDGRADCPNDRSDEEGCPCLYD-KWQCDDGTCIA---KELLCNGNIDC-----PEDISD 632
Query: 102 CPRSCSAYTQCSTC-LRHAHCG 122
R C C HCG
Sbjct: 633 -ERYCEGGYDSEECRFDEFHCG 653
Score = 40 (19.1 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 30 TNIKLKTGS--SCPLRCDQRTDC 50
T+ K + G S L+C+ R DC
Sbjct: 1434 TSFKCENGPCISLGLKCNGRVDC 1456
Score = 37 (18.1 bits), Expect = 1.3e-06, Sum P(4) = 1.3e-06
Identities = 7/16 (43%), Positives = 8/16 (50%)
Query: 43 RCDQRTDCQDCLTSSG 58
RCD DC D +G
Sbjct: 411 RCDGSIDCLDQTDEAG 426
Score = 37 (18.1 bits), Expect = 0.00016, Sum P(4) = 0.00016
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 95 GPHQAPQCPRSCSAYT-QC 112
G + +CP +CS QC
Sbjct: 507 GEDENEECPAACSGMEYQC 525
>UNIPROTKB|F1NMJ0 [details] [associations]
symbol:NELL1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0010468 "regulation of gene
expression" evidence=IEA] [GO:0030501 "positive regulation of bone
mineralization" evidence=IEA] [GO:0033689 "negative regulation of
osteoblast proliferation" evidence=IEA] [GO:0045669 "positive
regulation of osteoblast differentiation" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:2000599
"negative regulation of cyclin catabolic process" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001007 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00093 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS01208 PROSITE:PS50026 PROSITE:PS50184 SMART:SM00179
SMART:SM00181 SMART:SM00214 InterPro:IPR000152 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR026823 Pfam:PF12662 Pfam:PF02210
Pfam:PF12661 SMART:SM00210 GeneTree:ENSGT00700000104369
InterPro:IPR024731 Pfam:PF12947 OMA:GSHCEKD EMBL:AADN02040080
EMBL:AADN02040081 EMBL:AADN02040082 EMBL:AADN02040083
EMBL:AADN02040084 EMBL:AADN02040085 EMBL:AADN02040086
EMBL:AADN02040087 IPI:IPI00592543 Ensembl:ENSGALT00000005993
Uniprot:F1NMJ0
Length = 811
Score = 158 (60.7 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 56/188 (29%), Positives = 77/188 (40%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGC-VRGVCS 240
C +EC + H CD ++ C + G C C GY + G C C +GC G C
Sbjct: 474 CTEHDECGSGRHNCD-ENAICTNSVRGHSCTCKPGYVGN--GTICRAFCEEGCRYGGTCV 530
Query: 241 EPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKG---PQCDKCEPLYV 297
P+KC C G+ G +C + + +CA + + CHNH++ P CE
Sbjct: 531 APNKCVCPSGFTGNHCEKEADID---ECA-----EGIIECHNHSRCVNLPGWYHCE-CRS 581
Query: 298 GDPRDNGE-------CVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTT 350
G DNG CV E C T C N S A + + GG L GP+
Sbjct: 582 GF-HDNGSYSLSGESCVDIDE-CALKTHTCWNDS-ACVNLA---GGFDCLCP---SGPSC 632
Query: 351 RARCMHCG 358
C+H G
Sbjct: 633 TGDCLHEG 640
>UNIPROTKB|F1S0X0 [details] [associations]
symbol:LAMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0000904 "cell morphogenesis involved in
differentiation" evidence=IEA] GO:GO:0007601 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0060041 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 GeneTree:ENSGT00690000102103 OMA:QRGRRCE
EMBL:FP236754 EMBL:CU407178 Ensembl:ENSSSCT00000006279
Uniprot:F1S0X0
Length = 1583
Score = 161 (61.7 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 38/114 (33%), Positives = 53/114 (46%)
Query: 259 QCQCNGHADCAGPDKL-DVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHT 317
+C+CNGHA GPD+ + RC ++T GP C++C P + P G +E
Sbjct: 276 RCKCNGHASECGPDEEGQLACRCQHNTTGPDCERCLPFFQDRPWARGTAEAANE------ 329
Query: 318 GLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCVE 371
C+ + + S E EL G RC+HC +HT GP CE C E
Sbjct: 330 --CLPCNCSG--HSEECIFDRELFRTSGHG----GRCLHCRDHTAGPHCERCQE 375
>ZFIN|ZDB-GENE-050310-2 [details] [associations]
symbol:ntn2 "netrin 2" species:7955 "Danio rerio"
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 ZFIN:ZDB-GENE-050310-2 GO:GO:0005576
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933
Pfam:PF01759 SMART:SM00643 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464 eggNOG:NOG244580
HOGENOM:HOG000286017 OrthoDB:EOG4VHK67 GeneTree:ENSGT00700000104042
OMA:RAHPASY EMBL:FP102170 EMBL:CU929347 EMBL:AY928518
IPI:IPI00628796 RefSeq:NP_001032492.1 UniGene:Dr.153063
Ensembl:ENSDART00000112318 GeneID:641469 KEGG:dre:641469 CTD:641469
NextBio:20901575 Uniprot:Q32SK9
Length = 600
Score = 155 (59.6 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 41/122 (33%), Positives = 57/122 (46%)
Query: 259 QCQCNGHAD-CAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDP--RDNG----ECVPCSE 311
+C+CNGHA C + C ++T+GP+CD+C+P + P R G EC+PC+
Sbjct: 278 RCKCNGHASRCVREKDGKLLCECKHNTEGPECDRCKPFHYDRPWQRATGKEANECLPCN- 336
Query: 312 YCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCV 370
CN H C N L L +SGG CM+C ++T G C C
Sbjct: 337 -CNLHARRCRFNMELYKLS-GRKSGGV----------------CMNCRHNTAGRHCHYCK 378
Query: 371 EG 372
EG
Sbjct: 379 EG 380
>ZFIN|ZDB-GENE-060503-252 [details] [associations]
symbol:megf11 "multiple EGF-like-domains 11"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR007527
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS50966 PROSITE:PS51041
SMART:SM00181 ZFIN:ZDB-GENE-060503-252 GO:GO:0008270
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS50027
InterPro:IPR006212 InterPro:IPR009030 SMART:SM00261 SUPFAM:SSF57184
Pfam:PF12661 GeneTree:ENSGT00690000101691 EMBL:BX890618
EMBL:BX908395 EMBL:CR788229 IPI:IPI00785724
Ensembl:ENSDART00000090855 Uniprot:F1Q4V3
Length = 1114
Score = 158 (60.7 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 56/178 (31%), Positives = 74/178 (41%)
Query: 213 CGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQ-------CNGH 265
C GY E G CVP CS+ C G C PD CQC+ G+ G++CS C+ C+
Sbjct: 94 CCPGY--FESGDLCVPRCSEECAHGRCVSPDTCQCEPGWGGLDCSSGCESGYWGPHCSNR 151
Query: 266 ADCAGPDKLD----VCLRCHNHTKGPQC-DKCEPLYVGDPRD-NGECVPCSEYCNGHTGL 319
C + C+ C + +G +C D CEP Y G +C+ + C+ TG
Sbjct: 152 CQCKNGALCNPITGACV-CTDGYQGWRCEDLCEPGYYGKGCQLQCQCLNGAT-CHHETGE 209
Query: 320 CINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGN-----HTTGPKCEDCVEG 372
CI A P E + GP RC C N H TG +C C G
Sbjct: 210 CICAPGYMGPICGERCPSGS------HGPQCEQRCP-CQNGGTCHHITG-ECS-CPAG 258
Score = 121 (47.7 bits), Expect = 0.00064, P = 0.00064
Identities = 80/319 (25%), Positives = 106/319 (33%)
Query: 36 TGSSCPLRCDQRTDCQD---CLTSSGG---EGGW--HECRWSSMLNEC-ISPSYEALYCA 86
+GS P +C+QR CQ+ C +G GW C + I+ S E
Sbjct: 227 SGSHGP-QCEQRCPCQNGGTCHHITGECSCPAGWTGSVCAQPCPFGKYGINCSKECSCRN 285
Query: 87 GGVCGLVLGPHQAP------QCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTXX 140
GG+C + G Q +C C T C H C A G +C
Sbjct: 286 GGLCDHITGQCQCMAGYSGHRCQEECPVGTYGPQCTLHCDCQNGAKCYHINGAC-LCDTG 344
Query: 141 XXXXXXXXXXXXTCDILFYQTYPDQVIEVNNNDSFSWNYVKCPP-ENEC--------LND 191
C Y D+ N S N + C P EC L
Sbjct: 345 FKGHHCQDRF---CPPGLYGLICDKYCPCN-----STNTISCHPLTGECSCTAGWTGLYC 396
Query: 192 HHTCDP--QSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDF 249
+ TC P E C G C C G + G C+ C+ G CS+ C
Sbjct: 397 NETCPPGYYGEGC-----GVPCQCANGADCHSLTGACI--CAPGYTGDDCSQT----CPS 445
Query: 250 GYVGVNCSIQCQCNGHADCAGPDKLDVC----------LRCHNHTKGPQCDK---CEPLY 296
G G NC+ C C+ A C+ D +C + C + T G C++ C
Sbjct: 446 GLFGTNCTSICHCHNQASCSPIDGSCICKEGWQGVDCSILCSSGTWGLGCNQTCLCANGA 505
Query: 297 VGDPRDNGECVPCSEYCNG 315
DP D G C CS G
Sbjct: 506 ACDPID-GSCT-CSSGWRG 522
>UNIPROTKB|F1NK85 [details] [associations]
symbol:NTN1 "Netrin-1" species:9031 "Gallus gallus"
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
GeneTree:ENSGT00700000104042 EMBL:AADN02049477 EMBL:AADN02049478
IPI:IPI00819575 Ensembl:ENSGALT00000039263 Uniprot:F1NK85
Length = 330
Score = 150 (57.9 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 41/123 (33%), Positives = 58/123 (47%)
Query: 259 QCQCNGHADCAGPDKLD--VCLRCHNHTKGPQCDKCEPLYVGDP------RDNGECVPCS 310
+C+CNGHA DK VC C ++T+GP+CD+C+P + P R+ EC+ C+
Sbjct: 13 RCKCNGHASRCVKDKEQKLVC-DCKHNTEGPECDRCKPFHYDRPWQRASAREANECLACN 71
Query: 311 EYCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDC 369
CN H C N L L +SGG C++C ++T G C C
Sbjct: 72 --CNLHARRCRFNMELYKLS-GRKSGGV----------------CLNCRHNTAGRHCHYC 112
Query: 370 VEG 372
EG
Sbjct: 113 KEG 115
>UNIPROTKB|F1NEW2 [details] [associations]
symbol:NTN1 "Netrin-1" species:9031 "Gallus gallus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005794
GO:GO:0005576 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
GeneTree:ENSGT00700000104042 EMBL:AADN02049477 EMBL:AADN02049478
IPI:IPI01017205 Ensembl:ENSGALT00000014992 OMA:THKKACK
Uniprot:F1NEW2
Length = 336
Score = 150 (57.9 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 41/123 (33%), Positives = 58/123 (47%)
Query: 259 QCQCNGHADCAGPDKLD--VCLRCHNHTKGPQCDKCEPLYVGDP------RDNGECVPCS 310
+C+CNGHA DK VC C ++T+GP+CD+C+P + P R+ EC+ C+
Sbjct: 16 RCKCNGHASRCVKDKEQKLVC-DCKHNTEGPECDRCKPFHYDRPWQRASAREANECLACN 74
Query: 311 EYCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDC 369
CN H C N L L +SGG C++C ++T G C C
Sbjct: 75 --CNLHARRCRFNMELYKLS-GRKSGGV----------------CLNCRHNTAGRHCHYC 115
Query: 370 VEG 372
EG
Sbjct: 116 KEG 118
>ZFIN|ZDB-GENE-980526-104 [details] [associations]
symbol:tnc "tenascin C" species:7955 "Danio rerio"
[GO:0005575 "cellular_component" evidence=ND] [GO:0007498 "mesoderm
development" evidence=IEP] [GO:0001755 "neural crest cell
migration" evidence=IEP] [GO:0030517 "negative regulation of axon
extension" evidence=IMP] [GO:0007413 "axonal fasciculation"
evidence=IMP] [GO:0007411 "axon guidance" evidence=IMP] [GO:0021554
"optic nerve development" evidence=IMP] [GO:0014814 "axon
regeneration at neuromuscular junction" evidence=IMP] [GO:0048680
"positive regulation of axon regeneration" evidence=IMP]
[GO:0045887 "positive regulation of synaptic growth at
neuromuscular junction" evidence=IMP] InterPro:IPR000742
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50026 PROSITE:PS50853
SMART:SM00060 SMART:SM00181 INTERPRO:IPR002181
ZFIN:ZDB-GENE-980526-104 GO:GO:0007411 GO:GO:0007165
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0007498 GO:GO:0001755
GO:GO:0045887 SUPFAM:SSF49265 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 GO:GO:0048680 GO:GO:0007413 Gene3D:3.90.215.10
Gene3D:4.10.530.10 InterPro:IPR014716 InterPro:IPR014715
Pfam:PF00147 SMART:SM00186 SUPFAM:SSF56496 PROSITE:PS51406
InterPro:IPR013111 Pfam:PF07974 GO:GO:0030517 Pfam:PF12661
GO:GO:0021554 GeneTree:ENSGT00690000102056 EMBL:FP015972
IPI:IPI00899922 Ensembl:ENSDART00000026107
Ensembl:ENSDART00000131729 GO:GO:0014814 Uniprot:F1QYE2
Length = 1811
Score = 151 (58.2 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 88/363 (24%), Positives = 123/363 (33%)
Query: 40 CPLRCDQRTDCQD--CLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPH 97
CP+ C + +C D C+ + G G +C S+ + C+ C C
Sbjct: 225 CPVDCGENGECIDGACICAEGFIG--EDCSLSNCPSNCLGRGR----CVDDECVC----- 273
Query: 98 QAPQCPRSCSAYTQCSTCLRHAHC--GWCALQRDTTG---GMGVCTXXXXXXXXXXXXXX 152
P CS + C C G C TG G C
Sbjct: 274 DEPWTGFDCSELICPNDCFDRGRCENGTCYCDEGFTGEDCGELTCPQNCNHHGRCVNGQC 333
Query: 153 TCDILFYQTYPDQVIEVNNNDSFSWNYVKCPPENECLNDHHTCDPQSE-------QCVDL 205
C+I + ++ +N+ C C N CDP E C D
Sbjct: 334 ICNIGYSGEDCSKLTCLND----------CSERGHCFNGKCICDPGFEGEDCSLLSCPDN 383
Query: 206 ADGF------ECVCGRGYNKSEEGGECVPV-CSQGCV-RGVCSEPDKCQCDFGYVGVNCS 257
+G EC+CG GY EG +C + C C RG C KC C G+ G +CS
Sbjct: 384 CNGRGHCVNGECICGPGY----EGDDCSELSCLNNCHDRGRCVN-GKCICKAGFAGEDCS 438
Query: 258 IQ-C--QCNGHADCAGPDKLDVCLRCHNHTKGPQCD-KCEPLYVGDPRDNGECVPCSEYC 313
I+ C C+G +C C+ CH+ G C K P + +G+CV C
Sbjct: 439 IKTCPHDCHGRGECVDGK----CV-CHDGFAGEHCGIKTCPHHC---HGHGQCVDGKCIC 490
Query: 314 NGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCM--HCGNHTTGPKCEDCV 370
H G + S+ + P G + C C NH G CV
Sbjct: 491 --HKGFAGEDCSIKTCPNHCHGQGQCIDGKCICHDGFAGEDCSIKTCPNHCHGRG--RCV 546
Query: 371 EGK 373
+GK
Sbjct: 547 DGK 549
Score = 127 (49.8 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 42/130 (32%), Positives = 57/130 (43%)
Query: 195 CDPQSEQCVDLADGFECVCGRGYNKSEEGGEC-VPVCSQGCV-RGVCSEPDKCQCDFGYV 252
C Q QC+D G +C+C G+ G +C + C C RG C + KC C G+
Sbjct: 508 CHGQG-QCID---G-KCICHDGF----AGEDCSIKTCPNHCHGRGRCVD-GKCICHDGFA 557
Query: 253 GVNCSIQ-C--QCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPC 309
G +C+I+ C C+ H +C C+ CH G C E D + G CV
Sbjct: 558 GEDCNIKTCPNDCHDHGECVDGK----CI-CHAGFTGHDCS--ELTCPNDCHNRGRCVNG 610
Query: 310 SEYCN-GHTG 318
CN G TG
Sbjct: 611 QCVCNIGFTG 620
Score = 115 (45.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 40/123 (32%), Positives = 51/123 (41%)
Query: 185 ENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGEC-VPVCSQGCV-RGVCSEP 242
E C ND H +CV+ G +CVC G+ G +C C C+ RG C E
Sbjct: 594 ELTCPNDCHN----RGRCVN---G-QCVCNIGFT----GEDCGTKTCPNNCLDRGFC-ED 640
Query: 243 DKCQCDFGYVGVNCSI-QC--QCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGD 299
KC C GY G +CS+ C CN C +C+ C G C + P
Sbjct: 641 GKCVCFEGYTGEDCSVLTCPADCNDQGQCLN----GMCI-CDLGFTGDDCSEISP----- 690
Query: 300 PRD 302
PRD
Sbjct: 691 PRD 693
Score = 83 (34.3 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 28/97 (28%), Positives = 36/97 (37%)
Query: 39 SCPLRCDQRTDCQ--DCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVC----GL 92
SCP C+ R C +C+ G EG +C S LN C ++ C G C G
Sbjct: 379 SCPDNCNGRGHCVNGECICGPGYEGD--DCSELSCLNNC----HDRGRCVNGKCICKAGF 432
Query: 93 VLGPHQAPQCPRSCSAYTQC--STCLRH-----AHCG 122
CP C +C C+ H HCG
Sbjct: 433 AGEDCSIKTCPHDCHGRGECVDGKCVCHDGFAGEHCG 469
Score = 63 (27.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 21/80 (26%), Positives = 30/80 (37%)
Query: 39 SCPLRCDQRTDCQD--CLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLG- 95
+CP C R C D C+ G G +C + N+C ++ C G C G
Sbjct: 534 TCPNHCHGRGRCVDGKCICHDGFAG--EDCNIKTCPNDC----HDHGECVDGKCICHAGF 587
Query: 96 -PHQAPQ--CPRSCSAYTQC 112
H + CP C +C
Sbjct: 588 TGHDCSELTCPNDCHNRGRC 607
Score = 62 (26.9 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 23/90 (25%), Positives = 35/90 (38%)
Query: 39 SCPLRCDQRTDCQD--CLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGP 96
+CP C+ C + C+ + G G +C + LN+C E +C G C + P
Sbjct: 317 TCPQNCNHHGRCVNGQCICNIGYSG--EDCSKLTCLNDCS----ERGHCFNGKC--ICDP 368
Query: 97 HQAPQCPRSCSAYTQCSTCLRHAHC--GWC 124
+ CS + C HC G C
Sbjct: 369 GFEGE---DCSLLSCPDNCNGRGHCVNGEC 395
Score = 60 (26.2 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 24/79 (30%), Positives = 28/79 (35%)
Query: 40 CPLRCDQRTDCQD----CLTSSGGEG-GWHECRWSSMLN-ECISPSYEALYCAGGVCGLV 93
CP C + C+D C GGE G C N ECI A CA G G
Sbjct: 194 CPNYCQDQGRCEDGKCVCFEGFGGEDCGIELCPVDCGENGECIDG---ACICAEGFIG-- 248
Query: 94 LGPHQAPQCPRSCSAYTQC 112
CP +C +C
Sbjct: 249 -EDCSLSNCPSNCLGRGRC 266
Score = 58 (25.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 22/80 (27%), Positives = 31/80 (38%)
Query: 38 SSCPLRCDQRTDCQD--CLTSSGGEGGWHECRWSSMLNECISPSY-E--ALYCAGGVCGL 92
S+CP C R C D C+ G +C N+C E YC G G
Sbjct: 254 SNCPSNCLGRGRCVDDECVCDEPWTG--FDCSELICPNDCFDRGRCENGTCYCDEGFTGE 311
Query: 93 VLGPHQAPQCPRSCSAYTQC 112
G CP++C+ + +C
Sbjct: 312 DCGELT---CPQNCNHHGRC 328
Score = 58 (25.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 23/89 (25%), Positives = 33/89 (37%)
Query: 39 SCPLRCDQRTDCQD--CLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVC----GL 92
SC C R C + C+ +G G +C + ++C C G C G
Sbjct: 410 SCLNNCHDRGRCVNGKCICKAGFAG--EDCSIKTCPHDCHGRGE----CVDGKCVCHDGF 463
Query: 93 VLGPHQAPQ-CPRSCSAYTQC--STCLRH 118
G H + CP C + QC C+ H
Sbjct: 464 A-GEHCGIKTCPHHCHGHGQCVDGKCICH 491
>RGD|1305653 [details] [associations]
symbol:Pear1 "platelet endothelial aggregation receptor 1"
species:10116 "Rattus norvegicus" [GO:0001891 "phagocytic cup"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0043654 "recognition of
apoptotic cell" evidence=IEA;ISO] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
RGD:1305653 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
Pfam:PF12661 GeneTree:ENSGT00690000101691 GO:GO:0043654 OMA:PPGTWGF
IPI:IPI00914278 Ensembl:ENSRNOT00000019502 UCSC:RGD:1305653
ArrayExpress:E9PTZ1 Uniprot:E9PTZ1
Length = 1033
Score = 157 (60.3 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 51/162 (31%), Positives = 67/162 (41%)
Query: 183 PPENEC---LNDHHTCDPQS-------EQCV--DLADGFECVCGRGYNKSEEGGECVPVC 230
PP C D HTC + Q V D +C CG GY +S G CVP+C
Sbjct: 48 PPAESCDRPWEDPHTCAQPTVVYRTVYRQVVKMDSRPRLQC-CG-GYYESS--GACVPLC 103
Query: 231 SQGCVRGVCSEPDKCQCDFGYVGVNCSIQC-------QCNGHADCAGPDKLD----VCLR 279
+Q CV G C P++CQC G+ G +CS +C QC+ C D VC
Sbjct: 104 AQECVHGRCVAPNRCQCAPGWRGDDCSSECAPGMWGPQCDRLCLCGNSSSCDPRSGVCF- 162
Query: 280 CHNHTKGPQC-DKCEPLYVGDPRDNGECVPCSEYCNGHTGLC 320
C + + P C C + G P +C C+ G C
Sbjct: 163 CPSGLQPPDCLQPCPDGHYG-PACQFDCHCYGASCDPRDGAC 203
Score = 141 (54.7 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 63/214 (29%), Positives = 82/214 (38%)
Query: 176 SWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECV-CGRGYNKSEEGGECVPVC---- 230
+W + C +C ++ C PQ+ C G+ V C K + G C VC
Sbjct: 483 TWGF-SCNASCQCAHEG-VCSPQTGACT-CTPGWRGVHCQLPCPKGQFGEGCASVCDCDH 539
Query: 231 SQGC--VRGVCS-----EPDKCQ--CDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCH 281
S GC V G C +C C G+ G NCS C C C P+ + C+ C
Sbjct: 540 SDGCDPVHGHCRCQAGWMGTRCHLPCPEGFWGANCSNACTCKNGGTCV-PENGN-CV-CA 596
Query: 282 NHTKGPQCDK-CEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSEL 340
+GP C + C P G R CVPC CN H+ C P G S L
Sbjct: 597 PGFRGPSCQRPCPP---G--RYGKRCVPCK--CNNHSS-C----------HPSDGTCSCL 638
Query: 341 AAFLDEGPTTRARCM--HCGNHTTGPKCEDCVEG 372
A + GP C H G + P C+ C G
Sbjct: 639 AGWT--GPDCSESCPPGHWGLKCSQP-CQ-CHHG 668
Score = 131 (51.2 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 51/160 (31%), Positives = 64/160 (40%)
Query: 177 WNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECV-CGRGYNKSEEGGECVPV-CSQ-- 232
W C C N TC P++ CV A GF C R G CVP C+
Sbjct: 570 WG-ANCSNACTCKNGG-TCVPENGNCV-CAPGFRGPSCQRPCPPGRYGKRCVPCKCNNHS 626
Query: 233 GC--VRGVCS------EPDKCQ-CDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNH 283
C G CS PD + C G+ G+ CS CQC+ A C D VC+
Sbjct: 627 SCHPSDGTCSCLAGWTGPDCSESCPPGHWGLKCSQPCQCHHGATCHPQDGSCVCIP--GR 684
Query: 284 TKGPQCDK-CEPLYVG-DPRDNGECVPCSEYCNGHTGLCI 321
T GP C + C G + +C P E C+ TG C+
Sbjct: 685 T-GPNCSEGCPSRMFGVNCSQLCQCDP-GEMCHPETGACV 722
Score = 57 (25.1 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 27/98 (27%), Positives = 31/98 (31%)
Query: 37 GSSC--PLRCDQR--TDCQDCLTSSGGEGGWH--ECRWSSMLNECISPSYEALYCA-GGV 89
G SC P CD C + GW C S + + E C GGV
Sbjct: 354 GLSCQDPCTCDPEHSLSCHPMHGECSCQPGWAGLHCNESCPQDTHGAGCQEHCLCLHGGV 413
Query: 90 C----GLV-LGP-HQAPQCPRSCSAYTQCSTCLRHAHC 121
C GL P + P C C T C H C
Sbjct: 414 CLADSGLCRCAPGYTGPHCANLCPPNTYGINCSSHCSC 451
Score = 55 (24.4 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 26/92 (28%), Positives = 33/92 (35%)
Query: 35 KTGSSCPLRCDQRTDCQDC-LTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLV 93
+TG SC + C Q TD C T GG + S C P + G +C L
Sbjct: 209 RTGPSCNVPCSQGTDGFFCPRTYPCQNGGVPQGSQGSC--SC-PPGW-----MGVICSLP 260
Query: 94 L--GPHQAPQCPRSCSAYTQ--CSTCLRHAHC 121
G H P C + C + C HC
Sbjct: 261 CPEGFH-GPNCTQECRCHNGGLCDRFTGQCHC 291
>RGD|620999 [details] [associations]
symbol:Nell2 "NEL-like 2 (chicken)" species:10116 "Rattus
norvegicus" [GO:0005080 "protein kinase C binding" evidence=IDA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005615
"extracellular space" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0008201 "heparin binding" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0030425 "dendrite"
evidence=IDA] [GO:0040008 "regulation of growth" evidence=IDA]
[GO:0042802 "identical protein binding" evidence=IDA] [GO:0043204
"perikaryon" evidence=IDA] [GO:0070207 "protein homotrimerization"
evidence=IDA] InterPro:IPR000742 InterPro:IPR001007
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00093 Pfam:PF07645
PROSITE:PS01187 PROSITE:PS01208 PROSITE:PS50026 PROSITE:PS50184
SMART:SM00179 SMART:SM00181 SMART:SM00214 InterPro:IPR000152
RGD:620999 GO:GO:0005737 GO:GO:0005080 GO:GO:0005615 GO:GO:0016020
GO:GO:0030425 GO:GO:0043204 GO:GO:0008201 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0042802
GO:GO:0040008 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0070207 InterPro:IPR026823
Pfam:PF12662 Pfam:PF02210 SMART:SM00210 InterPro:IPR024731
Pfam:PF12947 eggNOG:NOG253557 HOVERGEN:HBG004805 OrthoDB:EOG44TP76
EMBL:U48245 IPI:IPI00568410 UniGene:Rn.11567
ProteinModelPortal:Q62918 STRING:Q62918 PRIDE:Q62918
UCSC:RGD:620999 InParanoid:Q62918 ArrayExpress:Q62918
Genevestigator:Q62918 GermOnline:ENSRNOG00000006235 Uniprot:Q62918
Length = 816
Score = 155 (59.6 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 41/135 (30%), Positives = 53/135 (39%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRG-VCS 240
C +ECL + H CD ++ C + G CVC GY + G C C GC G C
Sbjct: 480 CTEHDECLTNQHNCD-ENALCFNTVGGHNCVCKPGYTGN--GTTCKAFCKDGCKNGGACI 536
Query: 241 EPDKCQCDFGYVGVNCSIQC-QCN-GHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVG 298
+ C C G+ G +C +C+ G C D C N C+ C Y
Sbjct: 537 AANVCACPQGFTGPSCETDIDECSEGFVQC------DSRANCINLPGWYHCE-CRDGY-- 587
Query: 299 DPRDNGECVPCSEYC 313
DNG P E C
Sbjct: 588 --HDNGMFAPGGESC 600
>UNIPROTKB|F1NII7 [details] [associations]
symbol:FBN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0006030 "chitin metabolic process" evidence=IEA] [GO:0008061
"chitin binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002557 InterPro:IPR011398
InterPro:IPR018097 Pfam:PF07645 PIRSF:PIRSF036312 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50940 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005578 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 PROSITE:PS00010 GO:GO:0008061
InterPro:IPR026823 Pfam:PF12662 GO:GO:0005201 GO:GO:0006030
InterPro:IPR024731 Pfam:PF12947 GeneTree:ENSGT00700000104076
Gene3D:3.90.290.10 InterPro:IPR017878 PANTHER:PTHR24039:SF0
Pfam:PF00683 SUPFAM:SSF57581 PROSITE:PS51364 EMBL:AADN02045220
EMBL:AADN02045221 EMBL:AADN02045222 EMBL:AADN02045223
EMBL:AADN02045224 EMBL:AADN02045225 EMBL:AADN02045226
EMBL:AADN02045227 EMBL:AADN02045228 EMBL:AADN02045229
EMBL:AADN02045230 EMBL:AADN02045231 EMBL:AADN02045232
EMBL:AADN02045233 EMBL:AADN02045234 EMBL:AADN02045235
EMBL:AADN02045236 IPI:IPI00819082 ProteinModelPortal:F1NII7
Ensembl:ENSGALT00000007955 ArrayExpress:F1NII7 Uniprot:F1NII7
Length = 2822
Score = 160 (61.4 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 48/168 (28%), Positives = 78/168 (46%)
Query: 174 SFSW--NYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV-- 229
S W N +KC +EC N H C P ++ C + + C+C GY + +G C +
Sbjct: 1294 SSGWIGNGIKCTDLDECSNGTHKCSPHAD-CKNTMGSYRCLCKEGY--TGDGFTCTDLDE 1350
Query: 230 CSQG---CVRGVC-SEPD--KCQCDFGYVGVNCSIQCQ-CNGHADCAGPDKLDVCL--RC 280
CS+ C G C + P +C+CD G++ S+ + C +C+ P+ +C+ C
Sbjct: 1351 CSENLNLCENGQCLNAPGGYRCECDMGFLP---SLDGKACEDIDECSLPN---ICVYGTC 1404
Query: 281 HNHTKGPQCDKCEPLYVGDPRDNGECVP----CSEYCNGHTGLCINAS 324
HN +C+ CE Y D R G C C++ +G C+N +
Sbjct: 1405 HNLPGLFRCE-CEVGYELD-RSGGNCTADVNECADPTTCISGTCVNTA 1450
Score = 131 (51.2 bits), Expect = 0.00014, P = 0.00014
Identities = 54/206 (26%), Positives = 79/206 (38%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG---CVR 236
C +EC ++ + CD QC ++ + C+C G+ SE+ CV V C C+
Sbjct: 1179 CTDIDECEDNPNICD--GGQCTNIPGEYRCLCYDGFMASEDMKTCVDVNECDLHPNICLS 1236
Query: 237 GVCSEPDK---CQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCE 293
G C C CD GY G + C + G D C N +C C
Sbjct: 1237 GTCENTKGSFICHCDMGYSGKKGTTGCTDINECEI-GAHNCDRHAVCTNIPGSFKCS-CS 1294
Query: 294 PLYVGDP---RDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSE--LAAFLDEGP 348
++G+ D EC + C+ H C N ++ S + G T + LDE
Sbjct: 1295 SGWIGNGIKCTDLDECSNGTHKCSPHAD-CKN-TMGSYRCLCKEGYTGDGFTCTDLDECS 1352
Query: 349 TTRARCMH--CGNHTTGPKCEDCVEG 372
C + C N G +CE C G
Sbjct: 1353 ENLNLCENGQCLNAPGGYRCE-CDMG 1377
Score = 128 (50.1 bits), Expect = 0.00031, P = 0.00031
Identities = 29/97 (29%), Positives = 45/97 (46%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECV--------P-VCSQ 232
C +NEC H CD + +C +L + C+CG GY + +G C+ P +C
Sbjct: 2190 CRDQNECEEGIHDCDSKQMECKNLIGTYMCICGPGYQRRPDGEGCIDENECQTKPGLCEN 2249
Query: 233 G-CVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADC 268
G CV V S +C+C+ G+ + +C N C
Sbjct: 2250 GRCVNTVGSY--RCECNEGFTVSDTQNECLDNREGYC 2284
Score = 125 (49.1 bits), Expect = 0.00065, P = 0.00065
Identities = 50/195 (25%), Positives = 80/195 (41%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG--CVRG 237
C +EC + + C+ + QC++ G+ C C G+ S +G C + CS CV G
Sbjct: 1345 CTDLDECSENLNLCE--NGQCLNAPGGYRCECDMGFLPSLDGKACEDIDECSLPNICVYG 1402
Query: 238 VCSE-PD--KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEP 294
C P +C+C+ GY C + + +CA P + C N T G +C P
Sbjct: 1403 TCHNLPGLFRCECEVGYELDRSGGNCTADVN-ECADPTTC-ISGTCVN-TAGSYTCECPP 1459
Query: 295 LYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARC 354
+ +P G CV + +G C + ++GGT + + G + + C
Sbjct: 1460 DFELNPTRVG-CV------DTRSGNCY----LDIKTRGDNGGTF-CSNEIGVGVSKASCC 1507
Query: 355 MHCGNHTTGPKCEDC 369
G G CE C
Sbjct: 1508 CSLGR-AWGVPCEQC 1521
>UNIPROTKB|F1NJQ9 [details] [associations]
symbol:FBN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006030 "chitin metabolic process" evidence=IEA]
[GO:0008061 "chitin binding" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0001527 "microfibril"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0007507 "heart
development" evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002557 InterPro:IPR011398 InterPro:IPR018097
Pfam:PF07645 PIRSF:PIRSF036312 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50940 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005615 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 PROSITE:PS00010 GO:GO:0005604 GO:GO:0008061
GO:GO:0001527 InterPro:IPR026823 Pfam:PF12662 GO:GO:0005201
GO:GO:0006030 InterPro:IPR024731 Pfam:PF12947
GeneTree:ENSGT00700000104076 Gene3D:3.90.290.10 InterPro:IPR017878
PANTHER:PTHR24039:SF0 Pfam:PF00683 SUPFAM:SSF57581 PROSITE:PS51364
EMBL:AADN02045220 EMBL:AADN02045221 EMBL:AADN02045222
EMBL:AADN02045223 EMBL:AADN02045224 EMBL:AADN02045225
EMBL:AADN02045226 EMBL:AADN02045227 EMBL:AADN02045228
EMBL:AADN02045229 EMBL:AADN02045230 EMBL:AADN02045231
EMBL:AADN02045232 EMBL:AADN02045233 EMBL:AADN02045234
EMBL:AADN02045235 EMBL:AADN02045236 IPI:IPI00591865
Ensembl:ENSGALT00000038883 OMA:CDECPEK ArrayExpress:F1NJQ9
Uniprot:F1NJQ9
Length = 2838
Score = 160 (61.4 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 48/168 (28%), Positives = 78/168 (46%)
Query: 174 SFSW--NYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV-- 229
S W N +KC +EC N H C P ++ C + + C+C GY + +G C +
Sbjct: 1310 SSGWIGNGIKCTDLDECSNGTHKCSPHAD-CKNTMGSYRCLCKEGY--TGDGFTCTDLDE 1366
Query: 230 CSQG---CVRGVC-SEPD--KCQCDFGYVGVNCSIQCQ-CNGHADCAGPDKLDVCL--RC 280
CS+ C G C + P +C+CD G++ S+ + C +C+ P+ +C+ C
Sbjct: 1367 CSENLNLCENGQCLNAPGGYRCECDMGFLP---SLDGKACEDIDECSLPN---ICVYGTC 1420
Query: 281 HNHTKGPQCDKCEPLYVGDPRDNGECVP----CSEYCNGHTGLCINAS 324
HN +C+ CE Y D R G C C++ +G C+N +
Sbjct: 1421 HNLPGLFRCE-CEVGYELD-RSGGNCTADVNECADPTTCISGTCVNTA 1466
Score = 131 (51.2 bits), Expect = 0.00015, P = 0.00015
Identities = 54/206 (26%), Positives = 79/206 (38%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG---CVR 236
C +EC ++ + CD QC ++ + C+C G+ SE+ CV V C C+
Sbjct: 1195 CTDIDECEDNPNICD--GGQCTNIPGEYRCLCYDGFMASEDMKTCVDVNECDLHPNICLS 1252
Query: 237 GVCSEPDK---CQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCE 293
G C C CD GY G + C + G D C N +C C
Sbjct: 1253 GTCENTKGSFICHCDMGYSGKKGTTGCTDINECEI-GAHNCDRHAVCTNIPGSFKCS-CS 1310
Query: 294 PLYVGDP---RDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSE--LAAFLDEGP 348
++G+ D EC + C+ H C N ++ S + G T + LDE
Sbjct: 1311 SGWIGNGIKCTDLDECSNGTHKCSPHAD-CKN-TMGSYRCLCKEGYTGDGFTCTDLDECS 1368
Query: 349 TTRARCMH--CGNHTTGPKCEDCVEG 372
C + C N G +CE C G
Sbjct: 1369 ENLNLCENGQCLNAPGGYRCE-CDMG 1393
Score = 128 (50.1 bits), Expect = 0.00031, P = 0.00031
Identities = 29/97 (29%), Positives = 45/97 (46%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECV--------P-VCSQ 232
C +NEC H CD + +C +L + C+CG GY + +G C+ P +C
Sbjct: 2206 CRDQNECEEGIHDCDSKQMECKNLIGTYMCICGPGYQRRPDGEGCIDENECQTKPGLCEN 2265
Query: 233 G-CVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADC 268
G CV V S +C+C+ G+ + +C N C
Sbjct: 2266 GRCVNTVGSY--RCECNEGFTVSDTQNECLDNREGYC 2300
Score = 125 (49.1 bits), Expect = 0.00066, P = 0.00066
Identities = 50/195 (25%), Positives = 80/195 (41%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG--CVRG 237
C +EC + + C+ + QC++ G+ C C G+ S +G C + CS CV G
Sbjct: 1361 CTDLDECSENLNLCE--NGQCLNAPGGYRCECDMGFLPSLDGKACEDIDECSLPNICVYG 1418
Query: 238 VCSE-PD--KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEP 294
C P +C+C+ GY C + + +CA P + C N T G +C P
Sbjct: 1419 TCHNLPGLFRCECEVGYELDRSGGNCTADVN-ECADPTTC-ISGTCVN-TAGSYTCECPP 1475
Query: 295 LYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARC 354
+ +P G CV + +G C + ++GGT + + G + + C
Sbjct: 1476 DFELNPTRVG-CV------DTRSGNCY----LDIKTRGDNGGTF-CSNEIGVGVSKASCC 1523
Query: 355 MHCGNHTTGPKCEDC 369
G G CE C
Sbjct: 1524 CSLGR-AWGVPCEQC 1537
>UNIPROTKB|D4A284 [details] [associations]
symbol:Nell1 "Protein kinase C-binding protein NELL1"
species:10116 "Rattus norvegicus" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005635 "nuclear envelope" evidence=IEA]
[GO:0010468 "regulation of gene expression" evidence=IEA]
[GO:0030501 "positive regulation of bone mineralization"
evidence=IEA] [GO:0033689 "negative regulation of osteoblast
proliferation" evidence=IEA] [GO:0045669 "positive regulation of
osteoblast differentiation" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:2000599 "negative regulation
of cyclin catabolic process" evidence=IEA] InterPro:IPR000742
InterPro:IPR001007 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00093 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS01208
PROSITE:PS50026 PROSITE:PS50184 SMART:SM00179 SMART:SM00181
SMART:SM00214 InterPro:IPR000152 RGD:620998 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186 PROSITE:PS00010
Pfam:PF12661 GeneTree:ENSGT00700000104369 InterPro:IPR024731
Pfam:PF12947 Gene3D:2.40.155.10 InterPro:IPR023413 IPI:IPI00779084
Ensembl:ENSRNOT00000056030 ArrayExpress:D4A284 Uniprot:D4A284
Length = 369
Score = 149 (57.5 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 52/183 (28%), Positives = 72/183 (39%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGC-VRGVCS 240
C ++C + H CD ++ C + G C C GY + G C C +GC G C
Sbjct: 33 CTEHDDCGSGQHNCD-KNAICTNTVQGHSCTCQPGYVGN--GTICKAFCEEGCRYGGTCV 89
Query: 241 EPDKCQCDFGYVGVNCSIQC-QC-NGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVG 298
P+KC C G+ G +C +C G +C RC N C+ C +
Sbjct: 90 APNKCVCPSGFTGSHCEKDIDECAEGFVECHNHS------RCVNLPGWYHCE-CRSGFHD 142
Query: 299 DPRDN--GE-CVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCM 355
D + GE C+ E C T C N S A + + GG L GP+ C
Sbjct: 143 DGTYSLSGESCIDIDE-CALRTHTCWNDS-ACINLA---GGFDCLCP---SGPSCSGDCP 194
Query: 356 HCG 358
H G
Sbjct: 195 HEG 197
>UNIPROTKB|Q561K2 [details] [associations]
symbol:Nell2 "Protein kinase C-binding protein NELL2"
species:10116 "Rattus norvegicus" [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001007
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00093 Pfam:PF07645
PROSITE:PS01187 PROSITE:PS01208 PROSITE:PS50026 PROSITE:PS50184
SMART:SM00179 SMART:SM00181 SMART:SM00214 InterPro:IPR000152
RGD:620999 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 InterPro:IPR026823 Pfam:PF12662 Pfam:PF02210
SMART:SM00210 GeneTree:ENSGT00700000104369 InterPro:IPR024731
Pfam:PF12947 HOGENOM:HOG000217920 HOVERGEN:HBG004805 CTD:4753
IPI:IPI00568410 UniGene:Rn.11567 EMBL:BC093617 RefSeq:NP_112332.2
STRING:Q561K2 Ensembl:ENSRNOT00000008985 GeneID:81734
KEGG:rno:81734 InParanoid:Q561K2 NextBio:615408
Genevestigator:Q561K2 Uniprot:Q561K2
Length = 819
Score = 154 (59.3 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 41/135 (30%), Positives = 53/135 (39%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRG-VCS 240
C +ECL + H CD ++ C + G CVC GY + G C C GC G C
Sbjct: 483 CTEHDECLTNQHNCD-ENALCFNTVGGHNCVCKPGYTGN--GTTCKAFCKDGCRNGGACI 539
Query: 241 EPDKCQCDFGYVGVNCSIQC-QCN-GHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVG 298
+ C C G+ G +C +C+ G C D C N C+ C Y
Sbjct: 540 AANVCACPQGFTGPSCETDIDECSEGFVQC------DSRANCINLPGWYHCE-CRDGY-- 590
Query: 299 DPRDNGECVPCSEYC 313
DNG P E C
Sbjct: 591 --HDNGMFAPGGESC 603
>UNIPROTKB|Q5VY43 [details] [associations]
symbol:PEAR1 "Platelet endothelial aggregation receptor 1"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
[GO:0043654 "recognition of apoptotic cell" evidence=IEA]
InterPro:IPR000742 InterPro:IPR011489 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00181 GO:GO:0016021 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0001891 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 EMBL:AL356104 HOGENOM:HOG000294130
Pfam:PF12661 GO:GO:0043654 EMBL:AL158169 HOVERGEN:HBG108333
EMBL:AK074121 IPI:IPI00154858 RefSeq:NP_001073940.1
UniGene:Hs.142003 HSSP:P01133 ProteinModelPortal:Q5VY43 SMR:Q5VY43
IntAct:Q5VY43 STRING:Q5VY43 PhosphoSite:Q5VY43 DMDM:74757035
PRIDE:Q5VY43 DNASU:375033 Ensembl:ENST00000292357
Ensembl:ENST00000338302 GeneID:375033 KEGG:hsa:375033
UCSC:uc001fqj.1 CTD:375033 GeneCards:GC01P156865 H-InvDB:HIX0001178
HGNC:HGNC:33631 HPA:HPA035217 MIM:610278 neXtProt:NX_Q5VY43
PharmGKB:PA162399233 eggNOG:NOG320509 InParanoid:Q5VY43 OMA:PPGTWGF
OrthoDB:EOG451DPW GenomeRNAi:375033 NextBio:100378
ArrayExpress:Q5VY43 Bgee:Q5VY43 CleanEx:HS_PEAR1
Genevestigator:Q5VY43 Uniprot:Q5VY43
Length = 1037
Score = 160 (61.4 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 41/120 (34%), Positives = 54/120 (45%)
Query: 213 CGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQC-------QCNGH 265
C G+ +S G CVP+C+Q CV G C P++CQC G+ G +CS +C QC+
Sbjct: 90 CCHGFYESR--GFCVPLCAQECVHGRCVAPNQCQCVPGWRGDDCSSECAPGMWGPQCDKP 147
Query: 266 ADCAGPDKLD----VCLRCHNHTKGPQC-DKCEPLYVGDPRDNGECVPCSEYCNGHTGLC 320
C D VC C + + P C C P Y G P C C+ TG C
Sbjct: 148 CSCGNNSSCDPKSGVC-SCPSGLQPPNCLQPCTPGYYG-PACQFRCQCHGAPCDPQTGAC 205
Score = 129 (50.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 46/163 (28%), Positives = 62/163 (38%)
Query: 176 SWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVC----S 231
+W + C +C ++ C PQ+ C C K + G C C S
Sbjct: 485 TWGF-SCNASCQCAHEA-VCSPQTGACTCTPGWHGAHCQLPCPKGQFGEGCASRCDCDHS 542
Query: 232 QGC--VRGVCS-----EPDKCQ--CDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHN 282
GC V G C +C C G GVNCS C C C P+ + C+ C
Sbjct: 543 DGCDPVHGRCQCQAGWMGARCHLSCPEGLWGVNCSNTCTCKNGGTCL-PENGN-CV-CAP 599
Query: 283 HTKGPQCDK-CEPLYVGDPRDNGECVPCS----EYCNGHTGLC 320
+GP C + C+P G R CVPC +C+ G C
Sbjct: 600 GFRGPSCQRSCQP---G--RYGKRCVPCKCANHSFCHPSNGTC 637
Score = 120 (47.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 50/161 (31%), Positives = 64/161 (39%)
Query: 177 WNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECV-CGRGYNKSEEGGECVPV-CSQG- 233
W V C C N TC P++ CV A GF C R G CVP C+
Sbjct: 572 WG-VNCSNTCTCKNGG-TCLPENGNCV-CAPGFRGPSCQRSCQPGRYGKRCVPCKCANHS 628
Query: 234 -C--VRGVC------SEPDKCQ-CDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNH 283
C G C + PD Q C G+ G NC+ CQC+ C D C+ C
Sbjct: 629 FCHPSNGTCYCLAGWTGPDCSQPCPPGHWGENCAQTCQCHHGGTCHPQD--GSCI-CPLG 685
Query: 284 TKGPQC-DKCEPL--YVGDPRDNGECVPCSEYCNGHTGLCI 321
G C + C PL + + +C P E C+ TG C+
Sbjct: 686 WTGHHCLEGC-PLGTFGANCSQPCQCGP-GEKCHPETGACV 724
Score = 50 (22.7 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 24/96 (25%), Positives = 32/96 (33%)
Query: 38 SSCP-----LRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGL 92
S CP + C R C++ + S +G C+ C P C G G
Sbjct: 436 SLCPPDTYGVNCSARCSCENAIACSPIDGEC-VCKEGWQRGNCSVP------CPPGTWGF 488
Query: 93 VLGPHQAPQCPRS--CSAYTQCSTCLRHAHCGWCAL 126
+ + QC CS T TC H C L
Sbjct: 489 SC--NASCQCAHEAVCSPQTGACTCTPGWHGAHCQL 522
Score = 42 (19.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 14/55 (25%), Positives = 20/55 (36%)
Query: 66 CRWSSMLNECISPSYEALYCA----GGVCGLVLGPHQ-APQCPRSCSAYTQCSTC 115
C + C++P+ C G C P PQC + CS S+C
Sbjct: 105 CAQECVHGRCVAPNQ--CQCVPGWRGDDCSSECAPGMWGPQCDKPCSCGNN-SSC 156
Score = 40 (19.1 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 91 GLVLGPHQAPQCPRSCSAYTQCSTCLRHAH 120
GL L P P +CS + +T + +H
Sbjct: 14 GLRLAGTLNPSDPNTCSFWESFTTTTKESH 43
>UNIPROTKB|Q90922 [details] [associations]
symbol:NTN1 "Netrin-1" species:9031 "Gallus gallus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0071944 "cell
periphery" evidence=IDA] InterPro:IPR001134 PROSITE:PS50189
GO:GO:0005578 PROSITE:PS00022 GO:GO:0071944 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 EMBL:L34549 IPI:IPI00570611 PIR:A54665
RefSeq:NP_990750.1 UniGene:Gga.794 ProteinModelPortal:Q90922
IntAct:Q90922 STRING:Q90922 GeneID:396389 KEGG:gga:396389
eggNOG:NOG237372 HOVERGEN:HBG006464 KO:K06843 NextBio:20816431
Uniprot:Q90922
Length = 606
Score = 152 (58.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 42/123 (34%), Positives = 58/123 (47%)
Query: 259 QCQCNGHADCAGPDKLD--VCLRCHNHTKGPQCDKCEPLYVGDP------RDNGECVPCS 310
+C+CNGHA D+ D VC C ++T GP+CD+C+P + P R+ ECV C+
Sbjct: 286 RCKCNGHASRCVRDRDDNLVC-DCKHNTAGPECDRCKPFHYDRPWQRATAREANECVACN 344
Query: 311 EYCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDC 369
CN H C N L L +SGG C++C ++T G C C
Sbjct: 345 --CNLHARRCRFNMELYKLS-GRKSGGV----------------CLNCRHNTAGRHCHYC 385
Query: 370 VEG 372
EG
Sbjct: 386 KEG 388
>UNIPROTKB|E1BWU4 [details] [associations]
symbol:E1BWU4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
[GO:0046658 "anchored to plasma membrane" evidence=IEA]
InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
OMA:YCECFGH EMBL:AADN02033768 EMBL:AADN02033769 EMBL:AADN02033770
EMBL:AADN02033771 EMBL:AADN02033772 IPI:IPI00587584
ProteinModelPortal:E1BWU4 Ensembl:ENSGALT00000002932 Uniprot:E1BWU4
Length = 541
Score = 137 (53.3 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 36/112 (32%), Positives = 57/112 (50%)
Query: 259 QCQCNGHAD-CAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHT 317
+C+CN HA C +K +C C ++T GP C KC+ Y G P G +P + G
Sbjct: 298 RCKCNLHATGCKEENKRLLC-ECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPK---GTA 353
Query: 318 GLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDC 369
+CI S++S+ + E G S ++++ T C+ C ++T G CE C
Sbjct: 354 NICI-PSISSIG-NCECFGHSNRCSYIELLNTVI--CVSCKHNTRGQHCELC 401
Score = 57 (25.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 15/48 (31%), Positives = 21/48 (43%)
Query: 177 WNYVKCPPENECLNDHH--TCDPQSEQCVDLADGFECVCGRGYNKSEE 222
W+Y+ C PE + + T DP C D + F C G Y + E
Sbjct: 45 WDYMACQPEARDMIKYVRVTLDPPDITCGDPPETF-CAMGNPYMCNNE 91
>UNIPROTKB|Q225E5 [details] [associations]
symbol:TTHERM_02290890 "Putative uncharacterized protein"
species:312017 "Tetrahymena thermophila SB210" [GO:0004252
"serine-type endopeptidase activity" evidence=ISS]
InterPro:IPR001577 GO:GO:0016020 GO:GO:0008270 GO:GO:0006508
GO:GO:0007155 GO:GO:0004222 GO:GO:0004252 InterPro:IPR006212
InterPro:IPR009030 SMART:SM00261 SUPFAM:SSF57184 PANTHER:PTHR10942
EMBL:GG663348 RefSeq:XP_001028574.1 ProteinModelPortal:Q225E5
EnsemblProtists:EAR80911 GeneID:7901721 KEGG:tet:TTHERM_02290890
ProtClustDB:CLSZ2500114 Uniprot:Q225E5
Length = 333
Score = 147 (56.8 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 74/307 (24%), Positives = 113/307 (36%)
Query: 47 RTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEAL-------YCAGGVCGLVLGPHQ- 98
RT C + G G +C +S ++C PS Y + G C Q
Sbjct: 8 RTTCPNGTYQDSGSGLCKQCDFSC--SQCTGPSNSQCKACQFLTYLSNGSCVTTCPTGQY 65
Query: 99 APQCPRSCSAYTQ-CSTCLRHAHCGWCALQRDTTGGMGVCTXXXXXXXXXXXXXXTCDIL 157
A + ++CS CS+C + +C C + T G C+ +
Sbjct: 66 ADETSKTCSNCPDGCSSCTSYTNCTGC--KTGYTSSSGACSDSSCTGNCATCSSSSKSSC 123
Query: 158 FYQTYPDQVIEVNNNDSFSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECV-CGRG 216
T + ++ N + + CP + + TC S C +DG C C
Sbjct: 124 LSCT-SNLYLQPGNTCNST-----CPSGYYQNSQNMTCTACSTGCKACSDGKTCTQCDAS 177
Query: 217 YNKSEEGGECVPVCSQGCVRGVCSEPDKCQ-CDFG-YVGVN-CSIQCQCNGHADCAGPDK 273
++G C +C+ C S P+ CQ C+ G Y+ N C + CQ G+ + GP+
Sbjct: 178 SGYRQQGNSCT-LCASTCATCSSSNPNSCQSCENGLYLFNNQCVVTCQ-KGYFN--GPNY 233
Query: 274 LDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGE-CVPCSE----YCNGHTGLCINASLASL 328
C C G CD+C NG C CS + + +CIN+S
Sbjct: 234 --TCSPC---VTG--CDQCS---------NGNSCTTCSTDYQPFTYKNQQICINSSSCFS 277
Query: 329 PFSPESG 335
P S SG
Sbjct: 278 PCSTCSG 284
>MGI|MGI:1920432 [details] [associations]
symbol:Pear1 "platelet endothelial aggregation receptor 1"
species:10090 "Mus musculus" [GO:0001891 "phagocytic cup"
evidence=IDA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0043654 "recognition of apoptotic cell" evidence=IMP;IDA]
InterPro:IPR000742 InterPro:IPR011489 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00181 MGI:MGI:1920432 GO:GO:0016021
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 HOGENOM:HOG000294130
Pfam:PF12661 GeneTree:ENSGT00690000101691 GO:GO:0043654 HSSP:P01132
HOVERGEN:HBG108333 CTD:375033 eggNOG:NOG320509 OMA:PPGTWGF
OrthoDB:EOG451DPW EMBL:AF461685 EMBL:AF444274 EMBL:AF440279
EMBL:AK141082 EMBL:AK053551 EMBL:BC042490 EMBL:AK131151
IPI:IPI00283616 IPI:IPI00874618 IPI:IPI00874792 IPI:IPI00874938
RefSeq:NP_001027585.1 RefSeq:NP_001027586.1 RefSeq:NP_082736.1
RefSeq:NP_690012.2 UniGene:Mm.158962 ProteinModelPortal:Q8VIK5
SMR:Q8VIK5 STRING:Q8VIK5 PhosphoSite:Q8VIK5 PaxDb:Q8VIK5
PRIDE:Q8VIK5 Ensembl:ENSMUST00000029714 Ensembl:ENSMUST00000079083
Ensembl:ENSMUST00000090981 Ensembl:ENSMUST00000172621
Ensembl:ENSMUST00000174759 GeneID:73182 KEGG:mmu:73182
UCSC:uc008psq.1 UCSC:uc008psu.1 InParanoid:Q8VIK5 ChiTaRS:PEAR1
NextBio:337625 Bgee:Q8VIK5 CleanEx:MM_PEAR1 Genevestigator:Q8VIK5
Uniprot:Q8VIK5
Length = 1034
Score = 154 (59.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 39/120 (32%), Positives = 53/120 (44%)
Query: 213 CGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQC-------QCNGH 265
C RGY +S G CVP+C+Q CV G C P++CQC G+ G +CS +C QC+
Sbjct: 88 CCRGYYESR--GACVPLCAQECVHGRCVAPNQCQCAPGWRGGDCSSECAPGMWGPQCDKF 145
Query: 266 ADCAGPDKLD----VCLRCHNHTKGPQC-DKCEPLYVGDPRDNGECVPCSEYCNGHTGLC 320
C D C C + + P C C + G P +C C+ G C
Sbjct: 146 CHCGNNSSCDPKSGTCF-CPSGLQPPNCLQPCPAGHYG-PACQFDCQCYGASCDPQDGAC 203
Score = 129 (50.5 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 45/159 (28%), Positives = 58/159 (36%)
Query: 176 SWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVC----S 231
+W + C +C +D C PQ+ C C K + G C VC S
Sbjct: 483 TWGF-NCNASCQCAHDG-VCSPQTGACTCTPGWHGAHCQLPCPKGQFGEGCASVCDCDHS 540
Query: 232 QGC--VRGVCS-----EPDKCQ--CDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHN 282
GC V G C +C C G+ G NCS C C C + C+ C
Sbjct: 541 DGCDPVHGQCRCQAGWMGTRCHLPCPEGFWGANCSNTCTCKNGGTCVSEN--GNCV-CAP 597
Query: 283 HTKGPQCDK-CEPLYVGDPRDNGECVPCSEYCNGHTGLC 320
+GP C + C P G R CV C CN + C
Sbjct: 598 GFRGPSCQRPCPP---G--RYGKRCVQCK--CNNNHSSC 629
Score = 50 (22.7 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 25/92 (27%), Positives = 32/92 (34%)
Query: 35 KTGSSCPLRCDQRTDCQDC-LTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLV 93
+ G SC + C Q TD C T GG + S C P + G +C L
Sbjct: 209 RAGPSCNVPCSQGTDGFFCPRTYPCQNGGVPQGSQGSC--SC-PPGW-----MGVICSLP 260
Query: 94 L--GPHQAPQCPRSCSAYTQ--CSTCLRHAHC 121
G H P C + C + C HC
Sbjct: 261 CPEGFH-GPNCTQECRCHNGGLCDRFTGQCHC 291
Score = 40 (19.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 27/115 (23%), Positives = 41/115 (35%)
Query: 8 YGMSGQVAYTLEPR-TVKTDANRTNIKLKTGSSCPLRCDQRTDCQDCLTSSGGEGGWHEC 66
YG+S Q T +P ++ + G + L C++ C + G G C
Sbjct: 353 YGLSCQEPCTCDPEHSLSCHPMHGECSCQPGWA-GLHCNE-----SCPQDTHGPGCQEHC 406
Query: 67 RWSSMLNECISPSYEALYCAGGVCGLVLGPHQAPQCPR-----SCSAYTQCSTCL 116
C++ S CA G G PH A CP +CS+ C +
Sbjct: 407 LCLHG-GLCLADS-GLCRCAPGYTG----PHCANLCPPDTYGINCSSRCSCENAI 455
Score = 38 (18.4 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 19/82 (23%), Positives = 27/82 (32%)
Query: 42 LRCDQRTDCQDCLTSSGGEGGWHE-CRWSSMLNECISPSYEALYCAGGVCGLVLGPHQAP 100
++ D R Q C G C + C++P+ CA G G G
Sbjct: 78 VKMDSRPRLQCCRGYYESRGACVPLCAQECVHGRCVAPNQ--CQCAPGWRG---G----- 127
Query: 101 QCPRSCSAYTQCSTCLRHAHCG 122
C C+ C + HCG
Sbjct: 128 DCSSECAPGMWGPQCDKFCHCG 149
>UNIPROTKB|Q2HXW4 [details] [associations]
symbol:NTN1 "Netrin-1" species:9823 "Sus scrofa"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0006915 GO:GO:0005578 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HOVERGEN:HBG006464 KO:K06843 eggNOG:NOG244580
HOGENOM:HOG000286017 OrthoDB:EOG4H19V9 EMBL:DQ368597
RefSeq:NP_001038013.1 UniGene:Ssc.22870 ProteinModelPortal:Q2HXW4
STRING:Q2HXW4 GeneID:733599 KEGG:ssc:733599 CTD:180961
Uniprot:Q2HXW4
Length = 600
Score = 151 (58.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 42/123 (34%), Positives = 58/123 (47%)
Query: 259 QCQCNGHADCAGPDKLD--VCLRCHNHTKGPQCDKCEPLYVGDP------RDNGECVPCS 310
+C+CNGHA D+ D VC C ++T GP+CD+C+P + P R+ ECV C+
Sbjct: 284 RCKCNGHAARCVRDRDDSLVC-DCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACN 342
Query: 311 EYCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDC 369
CN H C N L L +SGG C++C ++T G C C
Sbjct: 343 --CNLHARRCRFNMELYKLS-GRKSGGV----------------CLNCRHNTAGRHCHYC 383
Query: 370 VEG 372
EG
Sbjct: 384 KEG 386
>ZFIN|ZDB-GENE-990415-168 [details] [associations]
symbol:ntn1b "netrin 1b" species:7955 "Danio rerio"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0016358
"dendrite development" evidence=IGI] InterPro:IPR001134
PROSITE:PS50189 ZFIN:ZDB-GENE-990415-168 GO:GO:0005576
GO:GO:0016358 GO:GO:2001240 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759 HSSP:P02468
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HOVERGEN:HBG006464 KO:K06843 EMBL:AF017420
IPI:IPI00512636 RefSeq:NP_571073.1 UniGene:Dr.75773
ProteinModelPortal:O42203 STRING:O42203 PRIDE:O42203 GeneID:30192
KEGG:dre:30192 CTD:30192 InParanoid:O42203 NextBio:20806657
ArrayExpress:O42203 Bgee:O42203 Uniprot:O42203
Length = 602
Score = 151 (58.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 39/122 (31%), Positives = 56/122 (45%)
Query: 259 QCQCNGHAD-CAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDP------RDNGECVPCSE 311
+C+CNGHA C + ++ C ++T GP+CD+C+P + P R+ ECV C
Sbjct: 283 RCKCNGHASKCVKDREGNLVCECKHNTAGPECDRCKPFHYDRPWQRATAREANECVAC-- 340
Query: 312 YCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCV 370
+CN H C N L L SGG C++C ++T G C C
Sbjct: 341 HCNLHARRCRFNMELYKLS-GRRSGGV----------------CLNCRHNTAGRHCHYCK 383
Query: 371 EG 372
EG
Sbjct: 384 EG 385
>UNIPROTKB|F1N0C7 [details] [associations]
symbol:NTN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060603 "mammary gland duct morphogenesis"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0030517 "negative regulation of axon extension" evidence=IEA]
[GO:0030334 "regulation of cell migration" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005737 GO:GO:0007411 GO:GO:0001764
GO:GO:0008284 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334
GO:GO:0016337 GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933
Pfam:PF01759 GO:GO:0030517 SMART:SM00643 GO:GO:0060603
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 KO:K06843 CTD:9423 OMA:NCHTCDA
EMBL:DAAA02048825 EMBL:DAAA02048826 EMBL:DAAA02048827
EMBL:DAAA02048828 EMBL:DAAA02048829 EMBL:DAAA02048830
EMBL:DAAA02048831 IPI:IPI00704401 RefSeq:NP_001179495.1
UniGene:Bt.88333 Ensembl:ENSBTAT00000016103 GeneID:522767
KEGG:bta:522767 NextBio:20873588 Uniprot:F1N0C7
Length = 603
Score = 151 (58.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 42/123 (34%), Positives = 58/123 (47%)
Query: 259 QCQCNGHADCAGPDKLD--VCLRCHNHTKGPQCDKCEPLYVGDP------RDNGECVPCS 310
+C+CNGHA D+ D VC C ++T GP+CD+C+P + P R+ ECV C+
Sbjct: 283 RCKCNGHAARCVRDRDDSLVC-DCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACN 341
Query: 311 EYCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDC 369
CN H C N L L +SGG C++C ++T G C C
Sbjct: 342 --CNLHARRCRFNMELYKLS-GRKSGGV----------------CLNCRHNTAGRHCHYC 382
Query: 370 VEG 372
EG
Sbjct: 383 KEG 385
>UNIPROTKB|F1PSP7 [details] [associations]
symbol:NTN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 OMA:NCHTCDA EMBL:AAEX03003649
EMBL:AAEX03003650 EMBL:AAEX03003651 EMBL:AAEX03003652
EMBL:AAEX03003653 Ensembl:ENSCAFT00000027581 Uniprot:F1PSP7
Length = 603
Score = 151 (58.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 42/123 (34%), Positives = 58/123 (47%)
Query: 259 QCQCNGHADCAGPDKLD--VCLRCHNHTKGPQCDKCEPLYVGDP------RDNGECVPCS 310
+C+CNGHA D+ D VC C ++T GP+CD+C+P + P R+ ECV C+
Sbjct: 284 RCKCNGHAARCVRDRDDSLVC-DCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACN 342
Query: 311 EYCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDC 369
CN H C N L L +SGG C++C ++T G C C
Sbjct: 343 --CNLHARRCRFNMELYKLS-GRKSGGV----------------CLNCRHNTAGRHCHYC 383
Query: 370 VEG 372
EG
Sbjct: 384 KEG 386
>UNIPROTKB|O95631 [details] [associations]
symbol:NTN1 "Netrin-1" species:9606 "Homo sapiens"
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030517 "negative
regulation of axon extension" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0042472
"inner ear morphogenesis" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0060603 "mammary
gland duct morphogenesis" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005737
Reactome:REACT_111045 GO:GO:0006915 GO:GO:0007411 GO:GO:0001764
GO:GO:0005576 GO:GO:0008284 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0030334 Reactome:REACT_111155 GO:GO:0016337 PROSITE:PS01186
GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933 Pfam:PF01759
GO:GO:0030517 SMART:SM00643 GO:GO:0060603 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464
KO:K06843 EMBL:U75586 EMBL:GU727649 EMBL:AC090610 EMBL:AC005695
IPI:IPI00006732 RefSeq:NP_004813.2 UniGene:Hs.660885
ProteinModelPortal:O95631 SMR:O95631 DIP:DIP-46273N IntAct:O95631
STRING:O95631 PhosphoSite:O95631 PaxDb:O95631 PRIDE:O95631
Ensembl:ENST00000173229 Ensembl:ENST00000538852
Ensembl:ENST00000546090 GeneID:9423 KEGG:hsa:9423 UCSC:uc002glw.4
CTD:9423 GeneCards:GC17P008865 H-InvDB:HIX0039241 HGNC:HGNC:8029
MIM:601614 neXtProt:NX_O95631 PharmGKB:PA31813 eggNOG:NOG244580
HOGENOM:HOG000286017 InParanoid:O95631 OMA:NCHTCDA
OrthoDB:EOG4H19V9 PhylomeDB:O95631 ChEMBL:CHEMBL1741307
GenomeRNAi:9423 NextBio:35298 ArrayExpress:O95631 Bgee:O95631
CleanEx:HS_NTN1 Genevestigator:O95631 GermOnline:ENSG00000065320
Uniprot:O95631
Length = 604
Score = 151 (58.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 42/123 (34%), Positives = 58/123 (47%)
Query: 259 QCQCNGHADCAGPDKLD--VCLRCHNHTKGPQCDKCEPLYVGDP------RDNGECVPCS 310
+C+CNGHA D+ D VC C ++T GP+CD+C+P + P R+ ECV C+
Sbjct: 284 RCKCNGHAARCVRDRDDSLVC-DCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACN 342
Query: 311 EYCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDC 369
CN H C N L L +SGG C++C ++T G C C
Sbjct: 343 --CNLHARRCRFNMELYKLS-GRKSGGV----------------CLNCRHNTAGRHCHYC 383
Query: 370 VEG 372
EG
Sbjct: 384 KEG 386
>MGI|MGI:105088 [details] [associations]
symbol:Ntn1 "netrin 1" species:10090 "Mus musculus"
[GO:0001764 "neuron migration" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=ISO] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0007409 "axonogenesis" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IDA;IMP] [GO:0008284 "positive
regulation of cell proliferation" evidence=IMP] [GO:0016337
"cell-cell adhesion" evidence=IGI] [GO:0030334 "regulation of cell
migration" evidence=IMP;IDA] [GO:0030517 "negative regulation of
axon extension" evidence=IDA] [GO:0030879 "mammary gland
development" evidence=IGI] [GO:0033564 "anterior/posterior axon
guidance" evidence=IMP] [GO:0040023 "establishment of nucleus
localization" evidence=IDA] [GO:0042472 "inner ear morphogenesis"
evidence=IMP] [GO:0045773 "positive regulation of axon extension"
evidence=IDA] [GO:0060603 "mammary gland duct morphogenesis"
evidence=IGI] [GO:0071944 "cell periphery" evidence=ISO]
InterPro:IPR001134 PROSITE:PS50189 MGI:MGI:105088 GO:GO:0005737
GO:GO:0006915 GO:GO:0007411 GO:GO:0001764 GO:GO:0008284
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334
Reactome:REACT_127416 GO:GO:0042472 GO:GO:0071944 GO:GO:0016337
PROSITE:PS01186 GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933
Pfam:PF01759 EMBL:CH466601 GO:GO:0030517 Reactome:REACT_137402
SMART:SM00643 GO:GO:0060603 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00690000102103
HOVERGEN:HBG006464 KO:K06843 CTD:9423 eggNOG:NOG244580
HOGENOM:HOG000286017 OMA:NCHTCDA OrthoDB:EOG4H19V9 EMBL:U65418
EMBL:AF128865 EMBL:AL669842 EMBL:AL606831 EMBL:AL662894
EMBL:BC141294 EMBL:U23505 IPI:IPI00114257 RefSeq:NP_032770.2
UniGene:Mm.39095 ProteinModelPortal:O09118 SMR:O09118 IntAct:O09118
STRING:O09118 PhosphoSite:O09118 PRIDE:O09118
Ensembl:ENSMUST00000021284 Ensembl:ENSMUST00000108674 GeneID:18208
KEGG:mmu:18208 InParanoid:B1ARR0 NextBio:293590 Bgee:O09118
CleanEx:MM_NTN1 Genevestigator:O09118 GermOnline:ENSMUSG00000020902
Uniprot:O09118
Length = 604
Score = 151 (58.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 42/123 (34%), Positives = 58/123 (47%)
Query: 259 QCQCNGHADCAGPDKLD--VCLRCHNHTKGPQCDKCEPLYVGDP------RDNGECVPCS 310
+C+CNGHA D+ D VC C ++T GP+CD+C+P + P R+ ECV C+
Sbjct: 284 RCKCNGHAARCVRDRDDSLVC-DCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACN 342
Query: 311 EYCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDC 369
CN H C N L L +SGG C++C ++T G C C
Sbjct: 343 --CNLHARRCRFNMELYKLS-GRKSGGV----------------CLNCRHNTAGRHCHYC 383
Query: 370 VEG 372
EG
Sbjct: 384 KEG 386
>RGD|619809 [details] [associations]
symbol:Ntn1 "netrin 1" species:10116 "Rattus norvegicus"
[GO:0001764 "neuron migration" evidence=ISO] [GO:0005576
"extracellular region" evidence=TAS] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0005604 "basement membrane"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=ISO] [GO:0007411 "axon guidance" evidence=ISO;NAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO] [GO:0016337 "cell-cell adhesion" evidence=ISO]
[GO:0030334 "regulation of cell migration" evidence=ISO]
[GO:0030517 "negative regulation of axon extension" evidence=ISO]
[GO:0030879 "mammary gland development" evidence=ISO] [GO:0033564
"anterior/posterior axon guidance" evidence=ISO] [GO:0040023
"establishment of nucleus localization" evidence=ISO] [GO:0042472
"inner ear morphogenesis" evidence=ISO] [GO:0045773 "positive
regulation of axon extension" evidence=ISO] [GO:0060603 "mammary
gland duct morphogenesis" evidence=ISO] InterPro:IPR001134
PROSITE:PS50189 RGD:619809 GO:GO:0005737 GO:GO:0006915
GO:GO:0007411 GO:GO:0001764 GO:GO:0008284 GO:GO:0005578
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334
Reactome:REACT_127416 Reactome:REACT_96538 GO:GO:0016337
PROSITE:PS01186 GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933
Pfam:PF01759 HSSP:P02468 GO:GO:0030517 SMART:SM00643 GO:GO:0060603
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
HOVERGEN:HBG006464 CTD:9423 eggNOG:NOG244580 HOGENOM:HOG000286017
OrthoDB:EOG4H19V9 EMBL:AY028417 IPI:IPI00205229 UniGene:Rn.41052
ProteinModelPortal:Q924Z9 IntAct:Q924Z9 STRING:Q924Z9 PRIDE:Q924Z9
UCSC:RGD:619809 InParanoid:Q924Z9 NextBio:618675
ArrayExpress:Q924Z9 Genevestigator:Q924Z9 Uniprot:Q924Z9
Length = 604
Score = 151 (58.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 42/123 (34%), Positives = 58/123 (47%)
Query: 259 QCQCNGHADCAGPDKLD--VCLRCHNHTKGPQCDKCEPLYVGDP------RDNGECVPCS 310
+C+CNGHA D+ D VC C ++T GP+CD+C+P + P R+ ECV C+
Sbjct: 284 RCKCNGHAARCVRDRDDSLVC-DCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACN 342
Query: 311 EYCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDC 369
CN H C N L L +SGG C++C ++T G C C
Sbjct: 343 --CNLHARRCRFNMELYKLS-GRKSGGV----------------CLNCRHNTAGRHCHYC 383
Query: 370 VEG 372
EG
Sbjct: 384 KEG 386
>UNIPROTKB|F1LPC8 [details] [associations]
symbol:Ntn1 "Netrin-1" species:10116 "Rattus norvegicus"
[GO:0001764 "neuron migration" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0016337
"cell-cell adhesion" evidence=IEA] [GO:0030334 "regulation of cell
migration" evidence=IEA] [GO:0030517 "negative regulation of axon
extension" evidence=IEA] [GO:0040023 "establishment of nucleus
localization" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0060603 "mammary gland duct morphogenesis"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 RGD:619809
GO:GO:0005737 GO:GO:0007411 GO:GO:0001764 GO:GO:0008284
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334 GO:GO:0016337
GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933 Pfam:PF01759
GO:GO:0030517 SMART:SM00643 GO:GO:0060603 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 KO:K06843 OMA:NCHTCDA IPI:IPI00205229
RefSeq:NP_446183.2 Ensembl:ENSRNOT00000005255 GeneID:114523
KEGG:rno:114523 ArrayExpress:F1LPC8 Uniprot:F1LPC8
Length = 604
Score = 151 (58.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 42/123 (34%), Positives = 58/123 (47%)
Query: 259 QCQCNGHADCAGPDKLD--VCLRCHNHTKGPQCDKCEPLYVGDP------RDNGECVPCS 310
+C+CNGHA D+ D VC C ++T GP+CD+C+P + P R+ ECV C+
Sbjct: 284 RCKCNGHAARCVRDRDDSLVC-DCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACN 342
Query: 311 EYCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDC 369
CN H C N L L +SGG C++C ++T G C C
Sbjct: 343 --CNLHARRCRFNMELYKLS-GRKSGGV----------------CLNCRHNTAGRHCHYC 383
Query: 370 VEG 372
EG
Sbjct: 384 KEG 386
>UNIPROTKB|A8XMW6 [details] [associations]
symbol:ced-1 "Cell death abnormality protein 1"
species:6238 "Caenorhabditis briggsae" [GO:0001845 "phagolysosome
assembly" evidence=ISS] [GO:0009986 "cell surface" evidence=ISS]
[GO:0012501 "programmed cell death" evidence=ISS] [GO:0031532
"actin cytoskeleton reorganization" evidence=ISS] [GO:0034620
"cellular response to unfolded protein" evidence=ISS] [GO:0042742
"defense response to bacterium" evidence=ISS] [GO:0043652
"engulfment of apoptotic cell" evidence=ISS] [GO:0045184
"establishment of protein localization" evidence=ISS]
InterPro:IPR000742 InterPro:IPR011489 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00181 GO:GO:0016021 GO:GO:0005886
GO:GO:0006915 GO:GO:0009986 GO:GO:0030670 GO:GO:0042742
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0045184 GO:GO:0031532
PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 GO:GO:0043652 GO:GO:0012501 GO:GO:0034620
InterPro:IPR006212 InterPro:IPR009030 SMART:SM00261 SUPFAM:SSF57184
EMBL:HE600911 ProteinModelPortal:A8XMW6 STRING:A8XMW6
EnsemblMetazoa:CBG15845 WormBase:CBG15845 HOGENOM:HOG000294130
GO:GO:0001845 Pfam:PF12661 Uniprot:A8XMW6
Length = 1134
Score = 154 (59.3 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 40/122 (32%), Positives = 59/122 (48%)
Query: 213 CGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQ-------CNGH 265
C GY ++++ +C P C+ C +G C EP KC+CD G+ G CS C C+
Sbjct: 105 CCEGYYQTKDN-QCQPDCNPPCKKGKCVEPGKCECDPGFGGKICSSSCSIGTWGLGCSKK 163
Query: 266 ADC---AGPD-KLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSE--YCNGHTGL 319
DC A D +L C+ C + +G +C++ P+ P C PC CN H G
Sbjct: 164 CDCENGANCDPELGDCI-CPSGFQGKRCEEECPIDKWGPNCVKSC-PCQNGGKCN-HEGK 220
Query: 320 CI 321
C+
Sbjct: 221 CV 222
Score = 141 (54.7 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 90/360 (25%), Positives = 126/360 (35%)
Query: 44 CDQRT-DCQDCLTS-SGGEGGWHECR----WSSMLNECISPSYEALYCAG--GVCGLVLG 95
CD +T +CQ C + G +C + +C + CA G C G
Sbjct: 348 CDAKTGECQ-CESGYKGANCDERKCSADTYGADCSKQCSCVMSNTVMCAPNTGFCRCKPG 406
Query: 96 PHQAPQCPRSCSAYTQCSTCLRHAHCGWC-ALQRDTTGGMGVCTXXXXXXXXXXXXXXTC 154
+ C +CS + C + A C W A + D G VC C
Sbjct: 407 FY-GDNCELACSKDSYGPNCEKQAMCDWTHASEADPANGKCVCKSGRSGANCSQ----PC 461
Query: 155 DILFYQTYPDQVIEVNNNDSFSWNYV-KCPPENECLNDH--HTCDPQSEQCVDLADGFEC 211
I FY E N + KC C + H C+ C L G C
Sbjct: 462 PIDFYGPNCALQCECNGRGIGCHGFDGKC----NCAPGYTGHRCE---HHCPALTFGANC 514
Query: 212 V----CGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQ--CDFGYVGVNCSIQCQC-NG 264
C G + GEC C G +G+ KC C G G C + C+C NG
Sbjct: 515 EKRCQCPAGVGCNPITGECE--CPAGR-QGL-----KCDISCPEGSYGPECKLHCKCVNG 566
Query: 265 HADCAGPDKLDVCLRCHNHTKGPQCD-KCEPLYVGDPRDNGECVPCSE-YCNGHTGLCI- 321
D P+ + C C G C C GD + C CS+ YC+ TG CI
Sbjct: 567 KCD---PETGE-C-SCEPGFGGADCSTSCPKGKYGDACELS-C-DCSDSYCSRQTGKCIC 619
Query: 322 ----NASLASLPFSPESGGTS-ELAAFLDEGPTTRAR---CMHCGNHTTGPKCE-DCVEG 372
+L P + G +L + +T R C+ C ++G +CE +C +G
Sbjct: 620 PLGKKGTLCDQPCEANTYGPQCQLTTTPSQCASTDPRNGVCLTCPPGSSGHQCEQNCPQG 679
Score = 133 (51.9 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 91/356 (25%), Positives = 130/356 (36%)
Query: 19 EPRTVKTDANRTNIKLKTGSSCPLRCD-QRTDCQ----DCLTSSGGEGGWHE--CRWSSM 71
EP D + + K K G +C L CD + C C+ G +G + C ++
Sbjct: 578 EPGFGGADCSTSCPKGKYGDACELSCDCSDSYCSRQTGKCICPLGKKGTLCDQPCEANTY 637
Query: 72 LNEC---ISPSYEALYCA-GGVCGLVLGPHQAP-QCPRSCSAYTQCSTCLRHAHCGWCAL 126
+C +PS A GVC L P + QC ++C T + C C
Sbjct: 638 GPQCQLTTTPSQCASTDPRNGVC-LTCPPGSSGHQCEQNCPQGTYGTDCASKCACADGGH 696
Query: 127 QRDTTGGMGVCTXXXXXXXXXXXXXXTCDILFYQTYPDQVIEVNNNDSFSWNYVK-CPPE 185
D T G +C TC + PD F + + CP
Sbjct: 697 GCDPTTGECICEPGYHGA--------TCS----EKCPD--------GKFGYACAQNCP-- 734
Query: 186 NECLNDHHTCDPQSEQCVDLA--DGFECV--CGRGY--NKSEEGGECVPVCSQ-GCVRGV 238
+C +CD S QCV A +G C CG G+ N + C Q G
Sbjct: 735 -KCAAGS-SCDHISGQCVCPAGLEGATCTRPCGVGFWGNGCRQVCRCTSEFKQCNAQTGE 792
Query: 239 CSEP-----DKCQ--CDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDK 291
CS P D+C C+ GY G +C +C+C G A + VC+ CH G C
Sbjct: 793 CSCPAGFQGDRCDKPCEDGYYGPDCIKKCKCQGTATASCNRVTGVCI-CHPGFTGEFCHA 851
Query: 292 CEPLYVGDPRDNGECVP--CSE-Y-CNGHTGLC----INASLASLPFSPESGGTSE 339
P R + EC C + Y C+ G C ++ A F +GG ++
Sbjct: 852 LCPESTFGLRCSKECPKDGCGDGYECDAAIGCCHVDQMSCGKAKQEFEALNGGRAK 907
>UNIPROTKB|Q9Y2I2 [details] [associations]
symbol:NTNG1 "Netrin-G1" species:9606 "Homo sapiens"
[GO:0005515 "protein binding" evidence=IPI] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0046658 "anchored to plasma
membrane" evidence=ISS] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0007409
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 Orphanet:3095 PDB:3ZYJ
PDBsum:3ZYJ EMBL:AB023193 EMBL:AY358365 EMBL:BX538348 EMBL:AL590427
EMBL:AL513187 EMBL:AC114491 EMBL:BC030220 IPI:IPI00412988
IPI:IPI00412989 IPI:IPI00477903 IPI:IPI00478407 IPI:IPI00478746
IPI:IPI00479203 RefSeq:NP_001106697.1 RefSeq:NP_001106699.1
RefSeq:NP_055732.2 UniGene:Hs.732535 ProteinModelPortal:Q9Y2I2
SMR:Q9Y2I2 STRING:Q9Y2I2 PhosphoSite:Q9Y2I2 DMDM:57015420
PRIDE:Q9Y2I2 DNASU:22854 Ensembl:ENST00000294649
Ensembl:ENST00000370065 Ensembl:ENST00000370066
Ensembl:ENST00000370067 Ensembl:ENST00000370068
Ensembl:ENST00000370071 Ensembl:ENST00000370073
Ensembl:ENST00000370074 Ensembl:ENST00000370076 GeneID:22854
KEGG:hsa:22854 UCSC:uc001dvc.4 UCSC:uc001dvd.1 UCSC:uc001dvf.4
UCSC:uc001dvh.4 CTD:22854 GeneCards:GC01P107682 HGNC:HGNC:23319
MIM:608818 neXtProt:NX_Q9Y2I2 PharmGKB:PA164742200 eggNOG:NOG286598
HOVERGEN:HBG052676 KO:K07522 OMA:YCECFGH ChiTaRS:NTNG1
GenomeRNAi:22854 NextBio:43337 ArrayExpress:Q9Y2I2 Bgee:Q9Y2I2
CleanEx:HS_NTNG1 Genevestigator:Q9Y2I2 GermOnline:ENSG00000162631
Uniprot:Q9Y2I2
Length = 539
Score = 136 (52.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 35/111 (31%), Positives = 53/111 (47%)
Query: 259 QCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTG 318
+C+CN HA D + C ++T GP C KC+ Y G P G +P + G
Sbjct: 296 RCKCNLHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPK---GTAN 352
Query: 319 LCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDC 369
CI S++S+ + E G S +++D T C+ C ++T G CE C
Sbjct: 353 TCI-PSISSIG-NCECFGHSNRCSYIDLLNTVI--CVSCKHNTRGQHCELC 399
Score = 57 (25.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 15/54 (27%), Positives = 22/54 (40%)
Query: 177 WNYVKCPPENECLNDHHTC--DPQSEQCVDLADGFECVCGRGYNKSEEGGECVP 228
W+Y+ C PE+ + + DP C D + F C G Y + E P
Sbjct: 45 WDYMACQPESTDMTKYLKVKLDPPDITCGDPPETF-CAMGNPYMCNNECDASTP 97
>ZFIN|ZDB-GENE-021226-2 [details] [associations]
symbol:lamb4 "laminin, beta 4" species:7955 "Danio
rerio" [GO:0005576 "extracellular region" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] ZFIN:ZDB-GENE-021226-2 GO:GO:0007155 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604 HSSP:P02468
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
HOGENOM:HOG000007552 InterPro:IPR013015 PROSITE:PS51116
HOVERGEN:HBG052301 EMBL:AF468050 IPI:IPI00485935 RefSeq:NP_775383.1
UniGene:Dr.120997 ProteinModelPortal:Q8JHV6 STRING:Q8JHV6
PRIDE:Q8JHV6 GeneID:286831 KEGG:dre:286831 CTD:22798
eggNOG:NOG303831 InParanoid:Q8JHV6 KO:K06245 OrthoDB:EOG41G346
NextBio:20806482 ArrayExpress:Q8JHV6 Uniprot:Q8JHV6
Length = 1827
Score = 156 (60.0 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 37/100 (37%), Positives = 47/100 (47%)
Query: 211 CVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKC-QCDFGYVGVNCSIQCQCNGHADCA 269
C C R + +E + CS C G+ +C +C GY G +CQCN AD
Sbjct: 901 CDCDRSGSTTELCDQTTGQCS--CRDGITGL--QCNRCYPGYYGFPLCRRCQCNRLADIC 956
Query: 270 GPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPC 309
P D CL C H+ G C++CE YVGDP C PC
Sbjct: 957 DPITGD-CLDCREHSAGRNCERCEEGYVGDPVSGQPCEPC 995
>MGI|MGI:1934028 [details] [associations]
symbol:Ntng1 "netrin G1" species:10090 "Mus musculus"
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0031225
"anchored to membrane" evidence=IEA] [GO:0046658 "anchored to
plasma membrane" evidence=IDA] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 MGI:MGI:1934028 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0007409 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00700000104042 CTD:22854 eggNOG:NOG286598
HOVERGEN:HBG052676 KO:K07522 EMBL:AB038662 EMBL:AB038663
EMBL:AB038664 EMBL:AB038665 EMBL:AB038666 EMBL:AB038667
EMBL:AF475069 EMBL:AF475070 EMBL:AF475071 EMBL:AF475072
EMBL:AF475073 EMBL:AF475074 EMBL:AF475075 EMBL:AF475076
EMBL:AF475077 EMBL:AF475078 EMBL:AK034465 EMBL:AK173075
EMBL:BC079881 IPI:IPI00323012 IPI:IPI00323015 IPI:IPI00323016
IPI:IPI00323017 IPI:IPI00354768 IPI:IPI00354771 IPI:IPI00354773
IPI:IPI00465860 IPI:IPI00469999 IPI:IPI00742371
RefSeq:NP_001156820.1 RefSeq:NP_001156821.1 RefSeq:NP_001156822.1
RefSeq:NP_001156823.1 RefSeq:NP_109624.1 RefSeq:NP_597995.1
UniGene:Mm.39262 ProteinModelPortal:Q8R4G0 SMR:Q8R4G0 STRING:Q8R4G0
PRIDE:Q8R4G0 Ensembl:ENSMUST00000072596 GeneID:80883 KEGG:mmu:80883
UCSC:uc008rai.2 UCSC:uc008raj.2 UCSC:uc008rak.2 UCSC:uc008ral.2
UCSC:uc008ram.2 UCSC:uc008rao.2 UCSC:uc008rap.1 UCSC:uc008raq.1
UCSC:uc008rar.2 InParanoid:Q8R4G0 NextBio:350195 Bgee:Q8R4G0
CleanEx:MM_NTNG1 Genevestigator:Q8R4G0
GermOnline:ENSMUSG00000059857 Uniprot:Q8R4G0
Length = 539
Score = 135 (52.6 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 35/111 (31%), Positives = 53/111 (47%)
Query: 259 QCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTG 318
+C+CN HA D + C ++T GP C KC+ Y G P G +P + G
Sbjct: 296 RCKCNLHATSCLYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPK---GTAN 352
Query: 319 LCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDC 369
CI S++S+ + E G S +++D T C+ C ++T G CE C
Sbjct: 353 TCI-PSISSIG-NCECFGHSNRCSYIDLLNTVI--CVSCKHNTRGQHCELC 399
Score = 58 (25.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 15/54 (27%), Positives = 21/54 (38%)
Query: 177 WNYVKCPPENECLNDHHTC--DPQSEQCVDLADGFECVCGRGYNKSEEGGECVP 228
W+Y C PE+ + + DP C D + F C G Y + E P
Sbjct: 45 WDYTACQPESTDMTKYLKVKLDPPDITCGDPPESF-CAMGNPYMCNNECDASTP 97
>UNIPROTKB|Q90923 [details] [associations]
symbol:NTN3 "Netrin-3" species:9031 "Gallus gallus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0007520 "myoblast fusion"
evidence=IDA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005794
GO:GO:0006355 GO:GO:0005578 PROSITE:PS00022 GO:GO:0007520
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933
Pfam:PF01759 SMART:SM00643 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464 eggNOG:NOG244580
HOGENOM:HOG000286017 EMBL:L34550 IPI:IPI00581364 PIR:B54665
UniGene:Gga.792 ProteinModelPortal:Q90923 STRING:Q90923
InParanoid:Q90923 OrthoDB:EOG4VHK67 Uniprot:Q90923
Length = 581
Score = 150 (57.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 41/123 (33%), Positives = 58/123 (47%)
Query: 259 QCQCNGHADCAGPDKLD--VCLRCHNHTKGPQCDKCEPLYVGDP------RDNGECVPCS 310
+C+CNGHA DK VC C ++T+GP+CD+C+P + P R+ EC+ C+
Sbjct: 261 RCKCNGHASRCVKDKEQKLVC-DCKHNTEGPECDRCKPFHYDRPWQRASAREANECLACN 319
Query: 311 EYCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDC 369
CN H C N L L +SGG C++C ++T G C C
Sbjct: 320 --CNLHARRCRFNMELYKLS-GRKSGGV----------------CLNCRHNTAGRHCHYC 360
Query: 370 VEG 372
EG
Sbjct: 361 KEG 363
>RGD|621188 [details] [associations]
symbol:Megf6 "multiple EGF-like-domains 6" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR011489 InterPro:IPR018097
Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51041
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 RGD:621188
GO:GO:0005576 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 InterPro:IPR026823 Pfam:PF12662
CTD:1953 HOGENOM:HOG000097840 HOVERGEN:HBG079790 EMBL:AB011532
IPI:IPI00207575 PIR:T13954 RefSeq:NP_075244.1 UniGene:Rn.195598
ProteinModelPortal:O88281 PRIDE:O88281 GeneID:65049 KEGG:rno:65049
UCSC:RGD:621188 InParanoid:O88281 NextBio:613892
Genevestigator:O88281 Uniprot:O88281
Length = 1574
Score = 137 (53.3 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 48/164 (29%), Positives = 67/164 (40%)
Query: 174 SFSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECV-CGRGYNKSEEGGECV-PV-C 230
S W C C ND H CDP + +C A G+ + C R + G +C+ P C
Sbjct: 822 SAGWYGTGCQIRCACANDGH-CDPTTGRC-SCAPGWTGLSCQRACDSGHWGPDCIHPCNC 879
Query: 231 SQG---C--VRGVCS-----EPDKCQ--CDFGYVGVNCSIQCQCNGHADCAGPDKLDVCL 278
S G C V G+C E +C+ C GY G +C +C+C A C D +
Sbjct: 880 SAGHGNCDAVSGLCLCEAGYEGPRCEQSCRQGYYGPSCEQKCRCEHGAAC---DHVSGAC 936
Query: 279 RCHNHTKGPQCDK-CEPLYVGDPRDNGECVPCSEYCNGHTGLCI 321
C +G C+ C + G D+ C+ TG CI
Sbjct: 937 TCPAGWRGSFCEHACPAGFFGLDCDSACNCSAGAPCDAVTGSCI 980
Score = 112 (44.5 bits), Expect = 9.6e-05, Sum P(3) = 9.6e-05
Identities = 48/166 (28%), Positives = 63/166 (37%)
Query: 173 DSFSWNYVKCPPENECLNDHHTCDPQSEQCVDLA--DGFECV--CGRGYNKSEEGGECVP 228
DS W P N C H CD S C+ A +G C C +GY +C
Sbjct: 865 DSGHWGPDCIHPCN-CSAGHGNCDAVSGLCLCEAGYEGPRCEQSCRQGYYGPSCEQKCR- 922
Query: 229 VCSQG--C--VRGVCSEP-----DKCQ--CDFGYVGVNCSIQCQCNGHADCAGPDKLDVC 277
C G C V G C+ P C+ C G+ G++C C C+ A C D +
Sbjct: 923 -CEHGAACDHVSGACTCPAGWRGSFCEHACPAGFFGLDCDSACNCSAGAPC---DAVTGS 978
Query: 278 LRCHNHTKGPQC-DKCEPLYVGDPRDNGECVPC--SEYCNGHTGLC 320
C GP+C C PL G + + C C+ TG C
Sbjct: 979 CICPAGRWGPRCAQSCPPLTFG--LNCSQICTCFNGASCDSVTGQC 1022
Score = 109 (43.4 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 35/129 (27%), Positives = 47/129 (36%)
Query: 187 ECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEP--DK 244
+C + CDP S C A C + G C +C C+ G +P
Sbjct: 1223 QCPGETWACDPASGVCTCAAGYHGTGCLQRCPSGRYGPGCEHICK--CLNGGTCDPATGA 1280
Query: 245 CQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNG 304
C C G++G +CS+ C G GP VC C +G CD + P G
Sbjct: 1281 CYCPAGFLGADCSLACP-QGRF---GPSCAHVCA-CR---QGAACDPVSGACICSPGKTG 1332
Query: 305 ECVPCSEYC 313
V C C
Sbjct: 1333 --VRCEHGC 1339
Score = 105 (42.0 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 48/169 (28%), Positives = 63/169 (37%)
Query: 210 ECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCA 269
EC C + G C+ C G C C G+ G C C+C A C
Sbjct: 1394 ECFCQNNGSCEPTTGACL--CGPGFYGQACEH----SCPSGFHGPGCQRVCECQQGAPC- 1446
Query: 270 GPDKLD-VCLRCHNHTKGPQCDK-CEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLAS 327
D + CL C G C+K CE GD G C + CN HTG+ + ++
Sbjct: 1447 --DPVSGQCL-CPAGFHGQFCEKGCESGSFGD----G----CLQQCNCHTGVPCDP-ISG 1494
Query: 328 LPFSP--ESGGTSELAAFLDE-GPTTRARCMHCGNHTTGPKCEDCVEGK 373
L P +G +L GP RC CG G C D + G+
Sbjct: 1495 LCLCPPGRTGAACDLDCRRGRFGPGCALRC-DCGG---GADC-DPISGQ 1538
Score = 79 (32.9 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGEC 226
C +EC + H C+ C +LA F+C C GY E+ C
Sbjct: 413 CEDVDECASGHGGCE---HHCSNLAGSFQCFCEAGYRLDEDRRGC 454
Score = 72 (30.4 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 28/101 (27%), Positives = 38/101 (37%)
Query: 37 GSSCPLRCDQRTDCQDCLTSSGGEGGWHECR--WSSML-NECISPSYEALYCA------- 86
G C L CD DC++ T G+ G +C W+ ++ NE P C+
Sbjct: 521 GHDCSLTCD---DCRNGGTCFPGQDGC-DCPEGWTGIICNETCPPDTFGKNCSSPCTCQN 576
Query: 87 GGVCGLVLGPHQAP------QCPRSCSAYTQCSTCLRHAHC 121
GG C VLG + P C C C + HC
Sbjct: 577 GGTCDPVLGACRCPPGVSGAHCEDGCPKGFYGKHCRKKCHC 617
Score = 44 (20.5 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 22/84 (26%), Positives = 28/84 (33%)
Query: 37 GSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVC--GLV- 93
G C C T +C S G C + EC+ P + G C G
Sbjct: 728 GEDCGQECPVGTFGVNCSGSCSCVGA--PCH--RVTGECLCPPGKTGEDCGADCPEGRWG 783
Query: 94 LGPHQ-APQCPRSCSAYTQCSTCL 116
LG + P C S + TCL
Sbjct: 784 LGCQEICPACEHGASCNPETGTCL 807
Score = 37 (18.1 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 5 RHLYGMSGQVAYTLEPRTV 23
R +Y MS + Y E RTV
Sbjct: 86 RTVYYMSYRQVYATEARTV 104
>UNIPROTKB|O88281 [details] [associations]
symbol:Megf6 "Multiple epidermal growth factor-like domains
protein 6" species:10116 "Rattus norvegicus" [GO:0005509 "calcium
ion binding" evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR011489 InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:621188 GO:GO:0005576 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186 eggNOG:NOG12793
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
InterPro:IPR026823 Pfam:PF12662 CTD:1953 HOGENOM:HOG000097840
HOVERGEN:HBG079790 EMBL:AB011532 IPI:IPI00207575 PIR:T13954
RefSeq:NP_075244.1 UniGene:Rn.195598 ProteinModelPortal:O88281
PRIDE:O88281 GeneID:65049 KEGG:rno:65049 UCSC:RGD:621188
InParanoid:O88281 NextBio:613892 Genevestigator:O88281
Uniprot:O88281
Length = 1574
Score = 137 (53.3 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 48/164 (29%), Positives = 67/164 (40%)
Query: 174 SFSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECV-CGRGYNKSEEGGECV-PV-C 230
S W C C ND H CDP + +C A G+ + C R + G +C+ P C
Sbjct: 822 SAGWYGTGCQIRCACANDGH-CDPTTGRC-SCAPGWTGLSCQRACDSGHWGPDCIHPCNC 879
Query: 231 SQG---C--VRGVCS-----EPDKCQ--CDFGYVGVNCSIQCQCNGHADCAGPDKLDVCL 278
S G C V G+C E +C+ C GY G +C +C+C A C D +
Sbjct: 880 SAGHGNCDAVSGLCLCEAGYEGPRCEQSCRQGYYGPSCEQKCRCEHGAAC---DHVSGAC 936
Query: 279 RCHNHTKGPQCDK-CEPLYVGDPRDNGECVPCSEYCNGHTGLCI 321
C +G C+ C + G D+ C+ TG CI
Sbjct: 937 TCPAGWRGSFCEHACPAGFFGLDCDSACNCSAGAPCDAVTGSCI 980
Score = 112 (44.5 bits), Expect = 9.6e-05, Sum P(3) = 9.6e-05
Identities = 48/166 (28%), Positives = 63/166 (37%)
Query: 173 DSFSWNYVKCPPENECLNDHHTCDPQSEQCVDLA--DGFECV--CGRGYNKSEEGGECVP 228
DS W P N C H CD S C+ A +G C C +GY +C
Sbjct: 865 DSGHWGPDCIHPCN-CSAGHGNCDAVSGLCLCEAGYEGPRCEQSCRQGYYGPSCEQKCR- 922
Query: 229 VCSQG--C--VRGVCSEP-----DKCQ--CDFGYVGVNCSIQCQCNGHADCAGPDKLDVC 277
C G C V G C+ P C+ C G+ G++C C C+ A C D +
Sbjct: 923 -CEHGAACDHVSGACTCPAGWRGSFCEHACPAGFFGLDCDSACNCSAGAPC---DAVTGS 978
Query: 278 LRCHNHTKGPQC-DKCEPLYVGDPRDNGECVPC--SEYCNGHTGLC 320
C GP+C C PL G + + C C+ TG C
Sbjct: 979 CICPAGRWGPRCAQSCPPLTFG--LNCSQICTCFNGASCDSVTGQC 1022
Score = 109 (43.4 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 35/129 (27%), Positives = 47/129 (36%)
Query: 187 ECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEP--DK 244
+C + CDP S C A C + G C +C C+ G +P
Sbjct: 1223 QCPGETWACDPASGVCTCAAGYHGTGCLQRCPSGRYGPGCEHICK--CLNGGTCDPATGA 1280
Query: 245 CQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNG 304
C C G++G +CS+ C G GP VC C +G CD + P G
Sbjct: 1281 CYCPAGFLGADCSLACP-QGRF---GPSCAHVCA-CR---QGAACDPVSGACICSPGKTG 1332
Query: 305 ECVPCSEYC 313
V C C
Sbjct: 1333 --VRCEHGC 1339
Score = 105 (42.0 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 48/169 (28%), Positives = 63/169 (37%)
Query: 210 ECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCA 269
EC C + G C+ C G C C G+ G C C+C A C
Sbjct: 1394 ECFCQNNGSCEPTTGACL--CGPGFYGQACEH----SCPSGFHGPGCQRVCECQQGAPC- 1446
Query: 270 GPDKLD-VCLRCHNHTKGPQCDK-CEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLAS 327
D + CL C G C+K CE GD G C + CN HTG+ + ++
Sbjct: 1447 --DPVSGQCL-CPAGFHGQFCEKGCESGSFGD----G----CLQQCNCHTGVPCDP-ISG 1494
Query: 328 LPFSP--ESGGTSELAAFLDE-GPTTRARCMHCGNHTTGPKCEDCVEGK 373
L P +G +L GP RC CG G C D + G+
Sbjct: 1495 LCLCPPGRTGAACDLDCRRGRFGPGCALRC-DCGG---GADC-DPISGQ 1538
Score = 79 (32.9 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGEC 226
C +EC + H C+ C +LA F+C C GY E+ C
Sbjct: 413 CEDVDECASGHGGCE---HHCSNLAGSFQCFCEAGYRLDEDRRGC 454
Score = 72 (30.4 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 28/101 (27%), Positives = 38/101 (37%)
Query: 37 GSSCPLRCDQRTDCQDCLTSSGGEGGWHECR--WSSML-NECISPSYEALYCA------- 86
G C L CD DC++ T G+ G +C W+ ++ NE P C+
Sbjct: 521 GHDCSLTCD---DCRNGGTCFPGQDGC-DCPEGWTGIICNETCPPDTFGKNCSSPCTCQN 576
Query: 87 GGVCGLVLGPHQAP------QCPRSCSAYTQCSTCLRHAHC 121
GG C VLG + P C C C + HC
Sbjct: 577 GGTCDPVLGACRCPPGVSGAHCEDGCPKGFYGKHCRKKCHC 617
Score = 44 (20.5 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 22/84 (26%), Positives = 28/84 (33%)
Query: 37 GSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVC--GLV- 93
G C C T +C S G C + EC+ P + G C G
Sbjct: 728 GEDCGQECPVGTFGVNCSGSCSCVGA--PCH--RVTGECLCPPGKTGEDCGADCPEGRWG 783
Query: 94 LGPHQ-APQCPRSCSAYTQCSTCL 116
LG + P C S + TCL
Sbjct: 784 LGCQEICPACEHGASCNPETGTCL 807
Score = 37 (18.1 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 5 RHLYGMSGQVAYTLEPRTV 23
R +Y MS + Y E RTV
Sbjct: 86 RTVYYMSYRQVYATEARTV 104
>UNIPROTKB|Q9H1U4 [details] [associations]
symbol:MEGF9 "Multiple epidermal growth factor-like domains
protein 9" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=NAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001368
SMART:SM00208 GO:GO:0016021 EMBL:CH471090 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 EMBL:AL138836 EMBL:AK295380 EMBL:AY358370
EMBL:AB011542 IPI:IPI00401283 RefSeq:NP_001073966.2
UniGene:Hs.741238 ProteinModelPortal:Q9H1U4 SMR:Q9H1U4
STRING:Q9H1U4 PhosphoSite:Q9H1U4 DMDM:116242627 PaxDb:Q9H1U4
PRIDE:Q9H1U4 DNASU:1955 Ensembl:ENST00000373930 GeneID:1955
KEGG:hsa:1955 UCSC:uc022bms.1 CTD:1955 GeneCards:GC09M123363
HGNC:HGNC:3234 HPA:HPA014319 MIM:604268 neXtProt:NX_Q9H1U4
eggNOG:NOG302694 HOGENOM:HOG000234343 HOVERGEN:HBG080442
InParanoid:Q9H1U4 OrthoDB:EOG43R3MN PhylomeDB:Q9H1U4
GenomeRNAi:1955 NextBio:7923 ArrayExpress:Q9H1U4 Bgee:Q9H1U4
CleanEx:HS_MEGF9 Genevestigator:Q9H1U4 GermOnline:ENSG00000106780
Uniprot:Q9H1U4
Length = 602
Score = 150 (57.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 46/153 (30%), Positives = 63/153 (41%)
Query: 201 QCVDLADGFEC-VCGRGYNKSEEGGECVPV-CS-QGCVRGVCSEPDKCQCDFGYVGVNCS 257
+C G C C G+ + G C P CS G + C+ KCQC G +G C
Sbjct: 225 ECRPGYQGLHCETCKEGFYLNYTSGLCQPCDCSPHGALSIPCNSSGKCQCKVGVIGSICD 284
Query: 258 --------------IQCQCNGHADCAGPDKLD-VCLRCHNHTKGPQCDKCEPLYVGDPRD 302
+ CQCN + A D L CL C ++KG C++C+ + P
Sbjct: 285 RCQDGYYGFSKNGCLPCQCNNRS--ASCDALTGACLNCQENSKGNHCEECKEGFYQSPDA 342
Query: 303 NGECV--PCSEYCNGHTGLCINASLASLPFSPE 333
EC+ PCS + TG C S+ S PE
Sbjct: 343 TKECLRCPCSAVTS--TGSC---SIKSSELEPE 370
>UNIPROTKB|F1LPI5 [details] [associations]
symbol:Lamb3 "Protein Lamb3" species:10116 "Rattus
norvegicus" [GO:0005610 "laminin-5 complex" evidence=IEA]
[GO:0050873 "brown fat cell differentiation" evidence=IEA]
RGD:1562668 GO:GO:0050873 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005610 GeneTree:ENSGT00620000087753
OMA:RSQMEED IPI:IPI00363443 UniGene:Rn.49634
ProteinModelPortal:F1LPI5 Ensembl:ENSRNOT00000008440 NextBio:654049
ArrayExpress:F1LPI5 Uniprot:F1LPI5
Length = 1171
Score = 153 (58.9 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 64/224 (28%), Positives = 85/224 (37%)
Query: 168 EVNNNDSFSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGEC- 226
+V+ +W V+C P ++ N H T +DLA + K +E G+
Sbjct: 159 QVHQGQPKNWQDVRCRPLSQRPNGHLTGGKVQLNLMDLASAIPASQSK---KIQELGDIT 215
Query: 227 ---VPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHAD-CA----GPDKL---- 274
V V S P F + C C+GHAD CA GP
Sbjct: 216 NLRVNFTKLAPVPQRGSYPPSAY--FAVSQLRLQGSCFCHGHADRCAPNPGGPTGSTTAV 273
Query: 275 ---DVCLRCHNHTKGPQCDKCEPLYVGDP------RDNGECVPCSEYCNGHTGLCINASL 325
DVC+ C ++T GP CD+C P Y P +D EC C CNGH+ C
Sbjct: 274 QVNDVCV-CQHNTAGPNCDRCAPFYNNRPWRPAEGQDIHECQRCD--CNGHSETC----- 325
Query: 326 ASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDC 369
F P A F T+ C +C +HT G CE C
Sbjct: 326 ---HFDP--------AVFAASQGTSGGVCDNCQDHTEGKNCERC 358
Score = 127 (49.8 bits), Expect = 0.00015, P = 0.00015
Identities = 59/202 (29%), Positives = 75/202 (37%)
Query: 195 CDPQSE----QCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQ-CDF 249
CDP C D G +CVC K GE +C G + P C CD
Sbjct: 381 CDPDGAVPGAPC-DRLTG-QCVC-----KDHVQGERCDLCKPGFTGLTFANPQGCHPCDC 433
Query: 250 GYVGVNCSIQCQCN-GHADC----AGPDKLDVCLRCH-NHTKGPQCDKC--EPLYVGDPR 301
+G + C+ G C GP K D C H G C+ C +P +
Sbjct: 434 SILGTRQDMPCEEETGRCLCLPNVVGP-KCDQCAPSHWKLASGRGCEPCACDPRNSLSSQ 492
Query: 302 DN---GECVPCSEYCNGHTGLCINASLASLPFSPESG-GTSELAAFLD----EGP---TT 350
N G+C PC E G T C +A++ P T A D EGP T
Sbjct: 493 CNQFTGQC-PCREGFGGLT--CSSAAIRQCPDRTHGDVATGCRACDCDFRGTEGPGCDKT 549
Query: 351 RARCMHCGNHTTGPKCEDCVEG 372
RC+ C TGP+C+ C G
Sbjct: 550 SGRCL-CRPGLTGPRCDQCQRG 570
>ZFIN|ZDB-GENE-060118-1 [details] [associations]
symbol:lama1 "laminin, alpha 1" species:7955 "Danio
rerio" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0043010 "camera-type eye development" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0030903 "notochord development"
evidence=IMP] [GO:0048514 "blood vessel morphogenesis"
evidence=IGI] [GO:0001568 "blood vessel development" evidence=IGI]
[GO:0007634 "optokinetic behavior" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0001764 "neuron migration" evidence=IGI;IMP]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
ZFIN:ZDB-GENE-060118-1 GO:GO:0001764 GO:GO:0030155 GO:GO:0048514
GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0043010 GO:GO:0030334
GO:GO:0008045 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0031290 Pfam:PF02210
GO:GO:0045995 GO:GO:0030903 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0007634
CTD:284217 HOVERGEN:HBG052298 KO:K05637 OrthoDB:EOG4K3KVB
GO:GO:0005606 EMBL:DQ131910 IPI:IPI00492896 RefSeq:NP_001030158.1
UniGene:Dr.94156 ProteinModelPortal:Q45H72 SMR:Q45H72 STRING:Q45H72
GeneID:569971 KEGG:dre:569971 NextBio:20889926 Uniprot:Q45H72
Length = 3075
Score = 157 (60.3 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 38/105 (36%), Positives = 46/105 (43%)
Query: 229 VCSQGCVRGVCSEPDKCQ-CDFGYVGV------NCSIQCQCNGHADCAGPDKLDV----C 277
+C Q C G DKCQ C GY G CS C+CNG+ D + + D C
Sbjct: 818 ICDQ-CQSGYTG--DKCQRCADGYFGEPVVPGQRCS-PCECNGNVDPSEAGRCDTHTGEC 873
Query: 278 LRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLCIN 322
L+C HT GP C++C Y GD C C Y NG N
Sbjct: 874 LKCVGHTAGPHCERCRDGYYGDAIQEKNCQACGCYSNGSLSTICN 918
>UNIPROTKB|A6QP76 [details] [associations]
symbol:PEAR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043654 "recognition of apoptotic cell" evidence=IEA]
[GO:0001891 "phagocytic cup" evidence=IEA] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS50027
HOGENOM:HOG000294130 Pfam:PF12661 GeneTree:ENSGT00690000101691
GO:GO:0043654 HOVERGEN:HBG108333 CTD:375033 eggNOG:NOG320509
OMA:PPGTWGF OrthoDB:EOG451DPW EMBL:DAAA02007120 EMBL:BC149186
IPI:IPI00712923 RefSeq:NP_001094770.1 UniGene:Bt.27046
Ensembl:ENSBTAT00000033952 GeneID:787112 KEGG:bta:787112
InParanoid:A6QP76 NextBio:20928268 Uniprot:A6QP76
Length = 1040
Score = 152 (58.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 39/121 (32%), Positives = 53/121 (43%)
Query: 213 CGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQC-------QCNGH 265
C RG+ +S G CVP+C+Q CV G C P++CQC + G +CS C +C+
Sbjct: 90 CCRGFYESR--GACVPLCAQECVHGRCVAPNQCQCVQDWRGDDCSSACAPGVWGPKCDKP 147
Query: 266 ADCAGPDKLD----VCLRCHNHTKGPQC-DKCEPLYVGDPRDNGECVPCSEYCNGHTGLC 320
+C D C C + + P C C P G P C CN TG C
Sbjct: 148 CNCGNSSSCDPKSGAC-SCPSGLQPPHCLQPCSPGLYG-PACQFSCQCHGAPCNPQTGAC 205
Query: 321 I 321
+
Sbjct: 206 L 206
Score = 126 (49.4 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 47/160 (29%), Positives = 61/160 (38%)
Query: 177 WNYVKCPPENECLNDHHTCDPQSEQCVDLADGFEC-VCGRGYNKSEEGGECVPV-CSQ-- 232
W C C N TC P++ CV A GF C + G CVP C+
Sbjct: 572 WG-ANCSNACACRNGG-TCIPKNGNCV-CAPGFRGPFCQKSCQPGRYGKRCVPCKCANHS 628
Query: 233 GC--VRGVC------SEPDKCQ-CDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNH 283
C G C + PD Q C G+ G NC+ CQC C D C C
Sbjct: 629 SCHPSNGTCYCLAGWTGPDCSQPCPLGHWGANCAQLCQCRHGGTCHPQD--GSCF-CPPG 685
Query: 284 TKGPQC-DKCEP-LYVGDPRDNGECVPCSEYCNGHTGLCI 321
G C + C P ++ + +C P E C+ TG C+
Sbjct: 686 WTGHLCLEGCSPGMFGANCSQPCQCGP-GERCHPETGACV 724
Score = 120 (47.3 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 45/156 (28%), Positives = 59/156 (37%)
Query: 176 SWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVC----S 231
+W + C +C ++ C PQ+ C C K + G C C +
Sbjct: 485 TWGF-GCNASCQCAHEA-ACSPQTGACTCTPGWHGTNCQLPCPKGQFGEGCASRCDCDHA 542
Query: 232 QGC--VRGVCS-----EPDKCQ--CDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHN 282
GC V G C +C C G+ G NCS C C C P K C+ C
Sbjct: 543 DGCDPVHGHCQCQAGWTGTRCHQPCPEGFWGANCSNACACRNGGTCI-P-KNGNCV-CAP 599
Query: 283 HTKGPQCDK-CEPLYVGDPRDNGECVPCSEYCNGHT 317
+GP C K C+P G R CVPC C H+
Sbjct: 600 GFRGPFCQKSCQP---G--RYGKRCVPCK--CANHS 628
Score = 68 (29.0 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 37/128 (28%), Positives = 50/128 (39%)
Query: 7 LYGMSGQVAYTLEPRTVKT----DANRTNIKLKTGSSCPLRCDQRTD---CQD-CLTSSG 58
LYG+S QV T +P + + + G C C Q T CQ+ CL G
Sbjct: 354 LYGLSCQVPCTCDPEHSLSCHPMSGECSCLPGWAGLHCNESCPQDTHGPGCQEHCLCLHG 413
Query: 59 GEGGWHECRWSSMLNECISPSYEALYCAGGVCGL-VLGPHQAPQCPRSCSAYTQCSTCLR 117
G C+ S L C +P Y +CA +C G + + +C SC CS
Sbjct: 414 GV-----CQPDSGLCRC-APGYTGPHCAS-LCPPDTYGVNCSQRC--SCENAIACSPIDG 464
Query: 118 HAHC--GW 123
C GW
Sbjct: 465 TCVCKEGW 472
>UNIPROTKB|F1MPK6 [details] [associations]
symbol:TNXB "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048251 "elastic fiber assembly" evidence=IEA]
[GO:0043506 "regulation of JUN kinase activity" evidence=IEA]
[GO:0043206 "extracellular fibril organization" evidence=IEA]
[GO:0032963 "collagen metabolic process" evidence=IEA] [GO:0030199
"collagen fibril organization" evidence=IEA] [GO:0016337 "cell-cell
adhesion" evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0007160 "cell-matrix adhesion" evidence=IEA] [GO:0006641
"triglyceride metabolic process" evidence=IEA] [GO:0006631 "fatty
acid metabolic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005583 "fibrillar collagen" evidence=IEA] [GO:0005518
"collagen binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50026 PROSITE:PS50853
SMART:SM00060 SMART:SM00181 INTERPRO:IPR002181 INTERPRO:IPR020837
GO:GO:0007165 GO:GO:0005615 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 GO:GO:0030199 GO:GO:0008201 GO:GO:0006631
GO:GO:0005622 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0006641
GO:GO:0016337 PROSITE:PS01186 GO:GO:0007160 Gene3D:3.90.215.10
Gene3D:4.10.530.10 InterPro:IPR014716 InterPro:IPR014715
Pfam:PF00147 SMART:SM00186 SUPFAM:SSF56496 PROSITE:PS00514
PROSITE:PS51406 GO:GO:0048251 InterPro:IPR013111 Pfam:PF07974
GO:GO:0043206 GO:GO:0043506 Pfam:PF12661 GO:GO:0005583
GeneTree:ENSGT00700000104247 GO:GO:0032963 EMBL:DAAA02055361
EMBL:DAAA02055362 EMBL:DAAA02055363 EMBL:DAAA02055364
EMBL:DAAA02055365 EMBL:DAAA02055366 EMBL:DAAA02055367
IPI:IPI00713324 Ensembl:ENSBTAT00000001893 OMA:PEGHFDH
Uniprot:F1MPK6
Length = 4059
Score = 136 (52.9 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 50/153 (32%), Positives = 64/153 (41%)
Query: 182 CPPENECLNDHHTCDP--QSEQCVDLADGFEC----VCGRGYNKSEEG--GE-C-VPVCS 231
C +CL CD + E C +C VC G EG GE C + VC
Sbjct: 485 CQGRGQCLEGRCVCDDGYEGEDCGVRRCPRDCNQRGVCQDGVCTCWEGFAGEDCGLRVCP 544
Query: 232 QGCVR-GVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKL--DVCLRCHNHTKGPQ 288
C R G C E +C CD GY G +C+ + C ADC G + VC+ CH G
Sbjct: 545 SNCHRRGRC-ENGRCVCDSGYTGPSCATRT-CP--ADCRGRGRCVQGVCV-CHVGYSGED 599
Query: 289 CDKCEPLYVGDPRDNGECVPCSEYCNGHTGLCI 321
C + EP P G C P E C+ +C+
Sbjct: 600 CGQEEPPASACP---GGCGP-RELCSAGQCVCV 628
Score = 123 (48.4 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 43/119 (36%), Positives = 53/119 (44%)
Query: 207 DGFECVCGRGYNKSEEGGEC-VPVCSQGC-VRGVCSEPDKCQCDFGYVGVNCSIQCQCNG 264
DG EC+C GY+ G +C V C C RG C E +C C GY G +C + C
Sbjct: 307 DG-ECICDPGYS----GDDCGVRSCPSDCNQRGRC-EDGRCVCWPGYSGPDCGARA-CP- 358
Query: 265 HADCAGPDKLD--VCLRCHNHTKGPQCD--KCEPLYVGDPRDNGECVPCSEYC-NGHTG 318
DC G + + VC+ CH G C C P GD R G C C G+TG
Sbjct: 359 -RDCRGRGRCENGVCV-CHAGYSGEDCGVRSC-P---GDCRGRGRCESGRCVCWPGYTG 411
Score = 118 (46.6 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 42/129 (32%), Positives = 54/129 (41%)
Query: 194 TCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVG 253
+C Q DG CVC GY+ + G P +G RG C E C C GY G
Sbjct: 325 SCPSDCNQRGRCEDG-RCVCWPGYSGPDCGARACPRDCRG--RGRC-ENGVCVCHAGYSG 380
Query: 254 VNCSIQCQCNGHADCAGPDKLDV--CLRCHNHTKGPQCD-KCEPLYVGDPRDNGECVPCS 310
+C ++ C G DC G + + C+ +T G C + P GD R G CV
Sbjct: 381 EDCGVR-SCPG--DCRGRGRCESGRCVCWPGYT-GRDCGTRACP---GDCRGRGRCVDGR 433
Query: 311 EYCN-GHTG 318
CN G G
Sbjct: 434 CVCNPGFAG 442
Score = 109 (43.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 40/117 (34%), Positives = 52/117 (44%)
Query: 207 DGFECVCGRGYNKSEEGGECVP-VCSQGCV-RGVCSEPDKCQCDFGYVGVNCSIQCQCNG 264
DG C C GY EG +C C +GC RG C E +C CD GY G +C ++ +C
Sbjct: 462 DGV-CSCDVGY----EGEDCGKRSCPRGCQGRGQCLE-GRCVCDDGYEGEDCGVR-RCPR 514
Query: 265 HADCAGPDKLDVCLRCHNHTKGPQCDK--CEPLYVGDPR-DNGECVPCSEYCNGHTG 318
+ G + VC C G C C R +NG CV C +G+TG
Sbjct: 515 DCNQRGVCQDGVCT-CWEGFAGEDCGLRVCPSNCHRRGRCENGRCV-CD---SGYTG 566
Score = 75 (31.5 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 24/80 (30%), Positives = 30/80 (37%)
Query: 39 SCPLRCDQRTDCQD--CLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVC----GL 92
SCP C QR C+D C+ + G G +C S +C C G C G
Sbjct: 170 SCPRGCSQRGRCEDGRCVCNPGYSG--EDCGVRSCPRDCSQRGR----CENGRCVCNPGY 223
Query: 93 VLGPHQAPQCPRSCSAYTQC 112
CPR CS +C
Sbjct: 224 TGDDCGVRSCPRGCSQKGRC 243
Score = 71 (30.1 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 26/89 (29%), Positives = 34/89 (38%)
Query: 39 SCPLRCDQRTDCQD--CLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGL---V 93
+CP C R C+D C+ G G +C + C S + C G C
Sbjct: 294 TCPRDCRGRGRCEDGECICDPGYSGD--DCG----VRSCPSDCNQRGRCEDGRCVCWPGY 347
Query: 94 LGPH-QAPQCPRSCSAYTQCST--CLRHA 119
GP A CPR C +C C+ HA
Sbjct: 348 SGPDCGARACPRDCRGRGRCENGVCVCHA 376
Score = 66 (28.3 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 26/85 (30%), Positives = 32/85 (37%)
Query: 39 SCPLRCDQRTDCQD--CLTSSGGEG---GWHECRWSSMLNECISPSYEALYCAGGVCGLV 93
SCP C Q+ C+D C+ G G G C W +C E C G C V
Sbjct: 232 SCPRGCSQKGRCEDGRCVCDPGYTGDDCGSRTCPW-----DC----GEGGRCVDGRC--V 280
Query: 94 LGPHQAPQ------CPRSCSAYTQC 112
P A + CPR C +C
Sbjct: 281 CWPGYAGEDCSTRTCPRDCRGRGRC 305
Score = 63 (27.2 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 22/71 (30%), Positives = 29/71 (40%)
Query: 39 SCPLRCDQRTDCQD--CLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGP 96
SCP C+QR C+D C+ G G +C + +C C GVC G
Sbjct: 325 SCPSDCNQRGRCEDGRCVCWPGYSGP--DCGARACPRDCRGRGR----CENGVCVCHAG- 377
Query: 97 HQAPQCP-RSC 106
+ C RSC
Sbjct: 378 YSGEDCGVRSC 388
Score = 61 (26.5 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 22/80 (27%), Positives = 28/80 (35%)
Query: 39 SCPLRCDQRTDCQD--CLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGP 96
+CP C R C D C+ + G G +C +C C GVC +G
Sbjct: 418 ACPGDCRGRGRCVDGRCVCNPGFAG--EDCGSRRCPGDCRGRGR----CEDGVCSCDVGY 471
Query: 97 HQAP----QCPRSCSAYTQC 112
CPR C QC
Sbjct: 472 EGEDCGKRSCPRGCQGRGQC 491
Score = 43 (20.2 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 19/79 (24%), Positives = 23/79 (29%)
Query: 38 SSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLV---L 94
S C C+ C G EG S C + C G C
Sbjct: 74 SRCACSCEPGWGGPTCSDPEGAEGP--PSSPPSAPGSCPDDCNDQGRCVRGRCVCFPGYT 131
Query: 95 GPHQA-PQCPRSCSAYTQC 112
GP + P CP C +C
Sbjct: 132 GPSCSWPSCPGDCHGRGRC 150
>ZFIN|ZDB-GENE-990415-169 [details] [associations]
symbol:ntn1a "netrin 1a" species:7955 "Danio rerio"
[GO:0033564 "anterior/posterior axon guidance" evidence=IMP]
[GO:0048665 "neuron fate specification" evidence=IMP] [GO:0016525
"negative regulation of angiogenesis" evidence=IMP] [GO:0001569
"patterning of blood vessels" evidence=IMP] [GO:0005576
"extracellular region" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IMP] [GO:0016358 "dendrite development" evidence=IGI]
InterPro:IPR001134 PROSITE:PS50189 ZFIN:ZDB-GENE-990415-169
GO:GO:0005576 GO:GO:0016358 GO:GO:0001569 GO:GO:0016525
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0048665
InterPro:IPR018933 Pfam:PF01759 HSSP:P02468 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 HOVERGEN:HBG006464 KO:K06843
HOGENOM:HOG000286017 OMA:NCHTCDA GO:GO:0033564 EMBL:BX255899
EMBL:AF002717 EMBL:CU638812 IPI:IPI00500311 RefSeq:NP_571104.1
UniGene:Dr.545 STRING:O42140 Ensembl:ENSDART00000027806
Ensembl:ENSDART00000148565 GeneID:30227 KEGG:dre:30227 CTD:30227
InParanoid:O42140 NextBio:20806684 Uniprot:O42140
Length = 603
Score = 149 (57.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 39/122 (31%), Positives = 56/122 (45%)
Query: 259 QCQCNGHAD-CAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDP------RDNGECVPCSE 311
+C+CNGHA C ++ C ++T GP+CD+C+P + P R+ ECV C+
Sbjct: 283 RCKCNGHASRCVKDRDGNLVCECKHNTAGPECDRCKPFHYDRPWQRATAREANECVACN- 341
Query: 312 YCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCV 370
CN H C N L L +SGG C++C ++T G C C
Sbjct: 342 -CNLHARRCRFNMELYKLS-GRKSGGV----------------CLNCRHNTAGRHCHYCK 383
Query: 371 EG 372
EG
Sbjct: 384 EG 385
>UNIPROTKB|F5H6I3 [details] [associations]
symbol:NELL1 "Protein kinase C-binding protein NELL1"
species:9606 "Homo sapiens" [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001007
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00093 Pfam:PF07645
PROSITE:PS01187 PROSITE:PS01208 PROSITE:PS50026 PROSITE:PS50184
SMART:SM00179 SMART:SM00181 SMART:SM00214 InterPro:IPR000152
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR008985
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 PROSITE:PS00010
Pfam:PF12661 SMART:SM00210 InterPro:IPR024731 Pfam:PF12947
EMBL:AC010811 EMBL:AC067794 EMBL:AC069575 EMBL:AC087279
EMBL:AC090707 EMBL:AC090857 EMBL:AC099730 EMBL:AC105190
EMBL:AC108460 HGNC:HGNC:7750 IPI:IPI00910471
ProteinModelPortal:F5H6I3 SMR:F5H6I3 Ensembl:ENST00000325319
UCSC:uc010rdo.2 ArrayExpress:F5H6I3 Bgee:F5H6I3 Uniprot:F5H6I3
Length = 753
Score = 150 (57.9 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 53/187 (28%), Positives = 76/187 (40%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGC-VRGVCS 240
C +EC + H CD ++ C + G C C GY + G C C +GC G C
Sbjct: 417 CTEHDECGSGQHNCD-ENAICTNTVQGHSCTCKPGYVGN--GTICRAFCEEGCRYGGTCV 473
Query: 241 EPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKG---P---QCDKCEP 294
P+KC C G+ G +C +C+ + + CHNH++ P C+ C
Sbjct: 474 APNKCVCPSGFTGSHCEKDID-----ECS-----EGIIECHNHSRCVNLPGWYHCE-CRS 522
Query: 295 LYVGDPRDN--GE-CVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTR 351
+ D + GE C+ E C T C N S A + + GG L GP+
Sbjct: 523 GFHDDGTYSLSGESCIDIDE-CALRTHTCWNDS-ACINLA---GGFDCLCP---SGPSCS 574
Query: 352 ARCMHCG 358
C H G
Sbjct: 575 GDCPHEG 581
>UNIPROTKB|H0YDQ9 [details] [associations]
symbol:ATRNL1 "Attractin-like protein 1" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR002165 Pfam:PF01437 GO:GO:0016021 EMBL:AL357059
EMBL:AC022542 EMBL:AC091667 EMBL:AL355530 EMBL:AL356100
EMBL:AL392087 EMBL:AL512304 HGNC:HGNC:29063 ChiTaRS:ATRNL1
InterPro:IPR003659 SMART:SM00423 Ensembl:ENST00000526373
Uniprot:H0YDQ9
Length = 216
Score = 138 (53.6 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 42/174 (24%), Positives = 64/174 (36%)
Query: 40 CPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQA 99
C C RT C +C TS+G EC W S C+ + + G C L A
Sbjct: 16 CKKPCSLRTSCSNC-TSNG-----MECMWCSSTKRCVDSNAYIISFPYGQC---LEWQTA 66
Query: 100 PQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTXXXXXXXXXXXXXXTCDILFY 159
P++CS C CL CGWC +T G G C L
Sbjct: 67 TCSPQNCSGLRTCGQCLEQPGCGWCNDPSNT--GRGHCIEGSSRGPMK---------LIG 115
Query: 160 QTYPDQVIEVN---NNDSFSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFE 210
+ + V++ N ++ W++++CP C + C + +C G +
Sbjct: 116 MHHSEMVLDTNLCPKEKNYEWSFIQCPACT-CSGHANICHLHTGKCFCTTKGIK 168
Score = 95 (38.5 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 43/145 (29%), Positives = 61/145 (42%)
Query: 179 YVKCPPENECLN-DHHTCDPQSEQCVDLADGFECV----CGRGYNKSEEG-GECVPVCSQ 232
Y+ P +CL TC PQ+ C L +C+ CG + S G G C+ S+
Sbjct: 51 YIISFPYGQCLEWQTATCSPQN--CSGLRTCGQCLEQPGCGWCNDPSNTGRGHCIEGSSR 108
Query: 233 GCVR--GVC-SEP--DKCQC----DFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNH 283
G ++ G+ SE D C ++ + + C C C+GHA+ C
Sbjct: 109 GPMKLIGMHHSEMVLDTNLCPKEKNYEWSFIQCPA-CTCSGHANICHLHT-GKCFCTTKG 166
Query: 284 TKGPQCDKC--EPLYVGDPRDNGEC 306
KG QC C E YVG+P G C
Sbjct: 167 IKGDQCQLCDSENRYVGNPL-RGTC 190
Score = 73 (30.8 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 93 VLGPHQ-APQCPRSCSAYTQCSTCLRHA-HCGWCA 125
V+ P+Q A C + CS T CS C + C WC+
Sbjct: 6 VVSPNQNARPCKKPCSLRTSCSNCTSNGMECMWCS 40
>MGI|MGI:1341292 [details] [associations]
symbol:Ush2a "Usher syndrome 2A (autosomal recessive, mild)"
species:10090 "Mus musculus" [GO:0001917 "photoreceptor inner
segment" evidence=ISO] [GO:0002141 "stereocilia ankle link"
evidence=NAS] [GO:0002142 "stereocilia ankle link complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005518 "collagen binding" evidence=ISO;IDA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005604 "basement
membrane" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016324 "apical plasma
membrane" evidence=IDA] [GO:0017022 "myosin binding" evidence=IPI]
[GO:0032391 "photoreceptor connecting cilium" evidence=ISO]
[GO:0032421 "stereocilium bundle" evidence=IDA] [GO:0042995 "cell
projection" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045494 "photoreceptor cell maintenance"
evidence=ISO;IMP] [GO:0048496 "maintenance of organ identity"
evidence=ISO] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0050953 "sensory perception of light stimulus" evidence=ISO]
[GO:0060113 "inner ear receptor cell differentiation" evidence=IMP]
[GO:0060171 "stereocilium membrane" evidence=IDA]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
MGI:MGI:1341292 GO:GO:0016021 GO:GO:0005737 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016324 SUPFAM:SSF49265 GO:GO:0045494
GO:GO:0050896 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005518
GO:GO:0007605 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0005604 GO:GO:0060113 Pfam:PF02210
GO:GO:0035315 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0002142 GO:GO:0048496 GO:GO:0060171
GeneTree:ENSGT00700000104042 CTD:7399 eggNOG:NOG245744
HOGENOM:HOG000124780 HOVERGEN:HBG094138 OMA:EIRIQAC
OrthoDB:EOG4B5P57 InterPro:IPR026915 PANTHER:PTHR10574:SF53
EMBL:AF151717 EMBL:DQ073638 EMBL:AC121799 EMBL:AC121892
EMBL:AC122122 EMBL:AC129312 EMBL:AC135863 EMBL:AC165230
IPI:IPI00720231 IPI:IPI00742431 IPI:IPI01007786 RefSeq:NP_067383.3
UniGene:Mm.331238 ProteinModelPortal:Q2QI47 STRING:Q2QI47
PhosphoSite:Q2QI47 PRIDE:Q2QI47 Ensembl:ENSMUST00000060479
GeneID:22283 KEGG:mmu:22283 UCSC:uc007eae.1 UCSC:uc007eaf.1
ChiTaRS:USH2A NextBio:302411 Bgee:Q2QI47 Genevestigator:Q2QI47
GermOnline:ENSMUSG00000026609 Uniprot:Q2QI47
Length = 5193
Score = 171 (65.3 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 45/121 (37%), Positives = 58/121 (47%)
Query: 259 QCQCNGHAD-CAGPDKLDVCLRC--HNHTKGPQCDKCEPLYVGDPRDNGE------CVPC 309
+CQC+GHA+ C + CL C H+ T+GPQCD+C PLY P +G+ C PC
Sbjct: 514 RCQCHGHAETCDRTRRPYRCL-CSPHSFTEGPQCDRCSPLYNDKPFRSGDNVNAFNCKPC 572
Query: 310 SEYCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCED 368
C+GH C +AS+ P GG G C C +HTTG CE
Sbjct: 573 Q--CHGHASSCHYDASVDPFPLEHNRGG----------GGV----CDDCQHHTTGRHCES 616
Query: 369 C 369
C
Sbjct: 617 C 617
Score = 39 (18.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 92 LVLGPHQAPQCPR--SCSAYTQCSTCLRHAHCGW 123
LVL Q PR + A+ + ST HA CG+
Sbjct: 27 LVLAASQGV-FPRLENVGAFRKVSTVPTHATCGF 59
>FB|FBgn0261514 [details] [associations]
symbol:nimA "nimrod A" species:7227 "Drosophila melanogaster"
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0006909
"phagocytosis" evidence=ISS] InterPro:IPR000742 InterPro:IPR011489
Pfam:PF07546 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
GO:GO:0016021 EMBL:AE014134 GO:GO:0006909 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0004180 RefSeq:NP_609691.6 UniGene:Dm.23800
ProteinModelPortal:Q8IP58 SMR:Q8IP58 STRING:Q8IP58 GeneID:318930
KEGG:dme:Dmel_CG42282 CTD:318930 FlyBase:FBgn0261514
InParanoid:Q8IP58 OrthoDB:EOG4Z8WBT GenomeRNAi:318930
NextBio:846614 Bgee:Q8IP58 Uniprot:Q8IP58
Length = 550
Score = 148 (57.2 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 43/128 (33%), Positives = 61/128 (47%)
Query: 213 CGRGY--NKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAG 270
C +GY N S+ C P+C GC RG C PD C C+ GY+G +C+ +C H D G
Sbjct: 97 CCQGYEGNLSDSQATCKPICRGGCGRGSCVMPDICSCEEGYIGKHCTQRCD---H-DRWG 152
Query: 271 PDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGE-C-VPCSEYCNGHTGLCINA-SLAS 327
D ++C +C N G CD L G+ C +PC + G +C A
Sbjct: 153 LDCKNLC-QCQN---GAACDNKSGLCHCIAGWTGQFCELPCPQGTYGI--MCRKACDCDE 206
Query: 328 LPFSPESG 335
P +P++G
Sbjct: 207 KPCNPQTG 214
>UNIPROTKB|P55268 [details] [associations]
symbol:LAMB2 "Laminin subunit beta-2" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005178
"integrin binding" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0014002 "astrocyte development" evidence=IEA] [GO:0014044
"Schwann cell development" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0048677 "axon extension involved in regeneration"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0072249 "metanephric glomerular visceral
epithelial cell development" evidence=IEA] [GO:0072274 "metanephric
glomerular basement membrane development" evidence=IEA] [GO:0005604
"basement membrane" evidence=IDA] [GO:0005608 "laminin-3 complex"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=NAS] [GO:0005605 "basal lamina" evidence=TAS] [GO:0005576
"extracellular region" evidence=TAS] [GO:0031012 "extracellular
matrix" evidence=ISS;IDA] [GO:0043260 "laminin-11 complex"
evidence=TAS] Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
GO:GO:0007411 GO:GO:0005198 GO:GO:0007528 GO:GO:0007601
GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0060041
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0014044
GO:GO:0014002 Orphanet:98915 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GO:GO:0005608 GO:GO:0043260
eggNOG:NOG241384 HOGENOM:HOG000007552 InterPro:IPR013015
PROSITE:PS51116 HOVERGEN:HBG052301 EMBL:Z68155 EMBL:Z68156
EMBL:X79683 EMBL:S77512 IPI:IPI00296922 PIR:A55677 PIR:S53869
RefSeq:NP_002283.3 UniGene:Hs.439726 ProteinModelPortal:P55268
SMR:P55268 DIP:DIP-42106N IntAct:P55268 MINT:MINT-1197111
STRING:P55268 PhosphoSite:P55268 DMDM:156630892 PaxDb:P55268
PRIDE:P55268 DNASU:3913 Ensembl:ENST00000305544
Ensembl:ENST00000418109 GeneID:3913 KEGG:hsa:3913 UCSC:uc003cwe.3
CTD:3913 GeneCards:GC03M049133 HGNC:HGNC:6487 HPA:CAB000053
HPA:HPA001895 MIM:150325 MIM:609049 MIM:614199 neXtProt:NX_P55268
Orphanet:2670 PharmGKB:PA164741827 InParanoid:P55268 KO:K06243
OMA:QPYCIVS OrthoDB:EOG4KSPHW PhylomeDB:P55268 ChiTaRS:LAMB2
GenomeRNAi:3913 NextBio:15371 ArrayExpress:P55268 Bgee:P55268
CleanEx:HS_LAMB2 Genevestigator:P55268 GermOnline:ENSG00000172037
GO:GO:0048677 GO:GO:0072274 GO:GO:0072249 Uniprot:P55268
Length = 1798
Score = 154 (59.3 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 45/149 (30%), Positives = 64/149 (42%)
Query: 181 KCPPENECLNDHHTCDPQSEQCVDLAD--GFEC-VCGRGYNKSEEGGECVPVCS-QGCVR 236
+C P+ ++ C+P QC+ G C +C GY G CS +G +
Sbjct: 784 QCNPQGSLSSE---CNPHGGQCLCKPGVVGRRCDLCAPGYYGFGPTGCQACQCSHEGALS 840
Query: 237 GVCSEPD-KCQCDFGYVGVNCSIQCQ-------------CNGHADCAGPDKLDVCLRCHN 282
+C + +C C G G+ C +CQ CNGHAD CL C +
Sbjct: 841 SLCEKTSGQCLCRTGAFGLRCD-RCQRGQWGFPSCRPCVCNGHADECNTHT-GACLGCRD 898
Query: 283 HTKGPQCDKCEPLYVGDPR--DNGECVPC 309
HT G C++C + GDPR G+C PC
Sbjct: 899 HTGGEHCERCIAGFHGDPRLPYGGQCRPC 927
Score = 124 (48.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 55/198 (27%), Positives = 75/198 (37%)
Query: 182 CP-PENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCS 240
CP PE H ++ + C C GY G C + C G
Sbjct: 927 CPCPEGPGSQRHFATSCHQDE---YSQQIVCHCRAGYT----GLRC-----EACAPGHFG 974
Query: 241 EPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDV----CLRCHNHTKGPQCDKCEPLY 296
+P + G C + C+C+G+ D PD D CLRC +HT+GP C C+P +
Sbjct: 975 DPSR-------PGGRCQL-CECSGNIDPMDPDACDPHTGQCLRCLHHTEGPHCAHCKPGF 1026
Query: 297 VGDPRDNGECVPCSEYCNGHTGLCINASLASLP----FSPESGGTSELAAFLDEGPTTRA 352
G C C+ CN L N P P SG L +GP+
Sbjct: 1027 HGQAARQS-CHRCT--CNL---LGTNPQQCPSPDQCHCDPSSGQCPCLPNV--QGPSCD- 1077
Query: 353 RCM-HCGNHTTGPKCEDC 369
RC + N T+G C+ C
Sbjct: 1078 RCAPNFWNLTSGHGCQPC 1095
Score = 61 (26.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 30/93 (32%), Positives = 36/93 (38%)
Query: 48 TDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQAPQCPRSCS 107
T CQ C S HE SS+ C S + L C G GL + +C R
Sbjct: 826 TGCQACQCS-------HEGALSSL---CEKTSGQCL-CRTGAFGL-----RCDRCQRGQW 869
Query: 108 AYTQCSTCL--RHA-----HCGWCALQRDTTGG 133
+ C C+ HA H G C RD TGG
Sbjct: 870 GFPSCRPCVCNGHADECNTHTGACLGCRDHTGG 902
>UNIPROTKB|E1C3A6 [details] [associations]
symbol:FBN2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IEA]
[GO:0030501 "positive regulation of bone mineralization"
evidence=IEA] [GO:0035583 "sequestering of TGFbeta in extracellular
matrix" evidence=IEA] [GO:0045669 "positive regulation of
osteoblast differentiation" evidence=IEA] [GO:0060346 "bone
trabecula formation" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR011398 InterPro:IPR018097
Pfam:PF07645 PIRSF:PIRSF036312 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005578
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030501
GO:GO:0045669 PROSITE:PS01186 PROSITE:PS00010 InterPro:IPR026823
Pfam:PF12662 GO:GO:0005201 GeneTree:ENSGT00700000104076
Gene3D:3.90.290.10 InterPro:IPR017878 PANTHER:PTHR24039:SF0
Pfam:PF00683 SUPFAM:SSF57581 PROSITE:PS51364 GO:GO:0035583
OMA:SGRNCID EMBL:AADN02058264 EMBL:AADN02058265 EMBL:AADN02058266
EMBL:AADN02058267 EMBL:AADN02058268 EMBL:AADN02058269
EMBL:AADN02058270 EMBL:AADN02058271 EMBL:AADN02058272
EMBL:AADN02058273 EMBL:AADN02058274 EMBL:AADN02058275
EMBL:AADN02058276 EMBL:AADN02058277 EMBL:AADN02058278
EMBL:AADN02058279 EMBL:AADN02058280 EMBL:AADN02058281
EMBL:AADN02058282 EMBL:AADN02058283 EMBL:AADN02058284
IPI:IPI00820359 Ensembl:ENSGALT00000023666 ArrayExpress:E1C3A6
Uniprot:E1C3A6
Length = 2914
Score = 156 (60.0 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 77/315 (24%), Positives = 119/315 (37%)
Query: 40 CPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECIS-PSYEALYCAGGVCGLVLGPHQ 98
C C +C + S G + R + ++EC + P C GG C + G ++
Sbjct: 1251 CDTHCTNSEGSYEC-SCSDGYALMPDVRTCADIDECENNPDI----CDGGQCSNIPGEYR 1305
Query: 99 APQCPRSCSAYTQCSTCLRHAHCGW----CAL-QRDTTGGMGVCTXXXXXXXXXXXXXXT 153
C A TC+ C C + + T G +C T
Sbjct: 1306 C-LCYDGFMASMDMKTCIDVNECDLNSNICMFGECENTKGSFICHCQLGYSVKKGTTGCT 1364
Query: 154 ----CDILFYQTYPDQVIE-VNNNDSFS------W--NYVKCPPENECLNDHHTCDPQSE 200
C+I + D VN SF W N +KC +EC N H C +
Sbjct: 1365 DVDECEIGAHNC--DMHASCVNVPGSFKCTCREGWFGNGIKCIDLDECSNGTHQCSVNA- 1421
Query: 201 QCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG---CVRGVC-SEPD--KCQCDFGYV 252
QCV+ + C C G+ + +G C V C++ C G C + P +C+C+ G+
Sbjct: 1422 QCVNTPGSYRCACAEGF--TGDGFTCSDVDECAENINLCENGQCLNVPGAYRCECEMGFT 1479
Query: 253 GVNCSIQCQCNGHADCAGPDKLDVCL--RCHNHTKGPQCDKCEPLYVGDPRDNGECVP-- 308
+ S CQ +C+ + +C+ C+N C C+ Y D R G C
Sbjct: 1480 PASDSKSCQ--DIDECSFQN---ICVFGTCNNLPGMFHCI-CDDGYELD-RSGGNCTDID 1532
Query: 309 -CSEYCNGHTGLCIN 322
C++ N GLC+N
Sbjct: 1533 ECADPINCVNGLCVN 1547
Score = 129 (50.5 bits), Expect = 0.00025, P = 0.00025
Identities = 35/110 (31%), Positives = 48/110 (43%)
Query: 197 PQSEQCV------DLADGF-----ECVCGRGYNKSEEGGECVPVCSQGCVRG-VCSEPDK 244
P QC+ DGF C C G G + CS C+ G C++ D+
Sbjct: 99 PGGNQCIVPICRNSCGDGFCSRPNMCTCASGQISPTCGPKSTQQCSIRCMNGGTCAD-DR 157
Query: 245 CQCDFGYVGVNCSIQ-CQ--CNGHADCAGPDKLDVCLRCHNHTKGPQCDK 291
CQC GY+GV C C+ C C GP++ C + T GPQC++
Sbjct: 158 CQCQKGYIGVYCGQPVCEKGCQNGGRCIGPNR---CACVYGFT-GPQCER 203
>UNIPROTKB|Q92832 [details] [associations]
symbol:NELL1 "Protein kinase C-binding protein NELL1"
species:9606 "Homo sapiens" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:2000599 "negative regulation of cyclin catabolic
process" evidence=IDA] [GO:0010468 "regulation of gene expression"
evidence=IDA] [GO:0030501 "positive regulation of bone
mineralization" evidence=IDA] [GO:0045669 "positive regulation of
osteoblast differentiation" evidence=IDA] [GO:0033689 "negative
regulation of osteoblast proliferation" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0007399 "nervous system
development" evidence=TAS] InterPro:IPR000742 InterPro:IPR001007
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00093 Pfam:PF07645
PROSITE:PS01187 PROSITE:PS01208 PROSITE:PS50026 PROSITE:PS50184
SMART:SM00179 SMART:SM00181 SMART:SM00214 InterPro:IPR000152
GO:GO:0005635 GO:GO:0048471 GO:GO:0005576 GO:GO:0007399
GO:GO:0030154 EMBL:CH471064 GO:GO:0006917 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030501
GO:GO:0045669 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0010468 GO:GO:2000599
GO:GO:0033689 InterPro:IPR026823 Pfam:PF12662 Pfam:PF02210
Pfam:PF12661 SMART:SM00210 InterPro:IPR024731 Pfam:PF12947
EMBL:D83017 EMBL:AK313445 EMBL:EU518937 EMBL:AC010811 EMBL:AC067794
EMBL:AC069575 EMBL:AC087279 EMBL:AC090707 EMBL:AC090857
EMBL:AC099730 EMBL:AC105190 EMBL:AC108460 EMBL:BC069674
EMBL:BC096100 EMBL:BC096101 EMBL:BC096102 EMBL:U57523
IPI:IPI00607581 IPI:IPI00974196 RefSeq:NP_006148.2
RefSeq:NP_963845.1 UniGene:Hs.657172 ProteinModelPortal:Q92832
SMR:Q92832 IntAct:Q92832 MINT:MINT-7034527 STRING:Q92832
PhosphoSite:Q92832 DMDM:311033486 PRIDE:Q92832 DNASU:4745
Ensembl:ENST00000357134 Ensembl:ENST00000532434 GeneID:4745
KEGG:hsa:4745 UCSC:uc001mqe.3 UCSC:uc001mqf.3 CTD:4745
GeneCards:GC11P020647 H-InvDB:HIX0009505 HGNC:HGNC:7750
HPA:HPA051535 MIM:602319 neXtProt:NX_Q92832 PharmGKB:PA31552
eggNOG:NOG253557 HOGENOM:HOG000217920 HOVERGEN:HBG004805
InParanoid:Q92832 OrthoDB:EOG4M0F11 PhylomeDB:Q92832
GenomeRNAi:4745 NextBio:18292 ArrayExpress:Q92832 Bgee:Q92832
CleanEx:HS_NELL1 CleanEx:HS_NRP1 Genevestigator:Q92832
GermOnline:ENSG00000165973 Uniprot:Q92832
Length = 810
Score = 150 (57.9 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 53/187 (28%), Positives = 76/187 (40%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGC-VRGVCS 240
C +EC + H CD ++ C + G C C GY + G C C +GC G C
Sbjct: 474 CTEHDECGSGQHNCD-ENAICTNTVQGHSCTCKPGYVGN--GTICRAFCEEGCRYGGTCV 530
Query: 241 EPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKG---P---QCDKCEP 294
P+KC C G+ G +C +C+ + + CHNH++ P C+ C
Sbjct: 531 APNKCVCPSGFTGSHCEKDID-----ECS-----EGIIECHNHSRCVNLPGWYHCE-CRS 579
Query: 295 LYVGDPRDN--GE-CVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTR 351
+ D + GE C+ E C T C N S A + + GG L GP+
Sbjct: 580 GFHDDGTYSLSGESCIDIDE-CALRTHTCWNDS-ACINLA---GGFDCLCP---SGPSCS 631
Query: 352 ARCMHCG 358
C H G
Sbjct: 632 GDCPHEG 638
>MGI|MGI:2443902 [details] [associations]
symbol:Nell1 "NEL-like 1" species:10090 "Mus musculus"
[GO:0005080 "protein kinase C binding" evidence=ISO] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0005576 "extracellular
region" evidence=IEA] [GO:0005615 "extracellular space"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006917 "induction of apoptosis" evidence=ISO]
[GO:0008201 "heparin binding" evidence=ISO] [GO:0010468 "regulation
of gene expression" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030501 "positive regulation of
bone mineralization" evidence=ISO] [GO:0033689 "negative regulation
of osteoblast proliferation" evidence=ISO] [GO:0042802 "identical
protein binding" evidence=ISO] [GO:0045667 "regulation of
osteoblast differentiation" evidence=ISO] [GO:0045669 "positive
regulation of osteoblast differentiation" evidence=ISO] [GO:0045778
"positive regulation of ossification" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0070207
"protein homotrimerization" evidence=ISO] [GO:2000599 "negative
regulation of cyclin catabolic process" evidence=ISO]
InterPro:IPR000742 InterPro:IPR001007 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00093 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS01208 PROSITE:PS50026 PROSITE:PS50184 SMART:SM00179
SMART:SM00181 SMART:SM00214 InterPro:IPR000152 MGI:MGI:2443902
GO:GO:0005635 GO:GO:0048471 GO:GO:0005576 GO:GO:0030154
GO:GO:0006917 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030501 GO:GO:0045669 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0010468 GO:GO:2000599 GO:GO:0033689 Pfam:PF02210 Pfam:PF12661
SMART:SM00210 GeneTree:ENSGT00700000104369 InterPro:IPR024731
Pfam:PF12947 CTD:4745 eggNOG:NOG253557 HOGENOM:HOG000217920
HOVERGEN:HBG004805 OrthoDB:EOG4M0F11 EMBL:AY622226 IPI:IPI00222885
RefSeq:NP_001032995.1 UniGene:Mm.383528 ProteinModelPortal:Q2VWQ2
SMR:Q2VWQ2 STRING:Q2VWQ2 PRIDE:Q2VWQ2 DNASU:338352
Ensembl:ENSMUST00000081872 GeneID:338352 KEGG:mmu:338352
UCSC:uc009hby.1 InParanoid:Q2VWQ2 OMA:GSHCEKD ChiTaRS:NELL1
NextBio:400121 Bgee:Q2VWQ2 CleanEx:MM_NELL1 Genevestigator:Q2VWQ2
Uniprot:Q2VWQ2
Length = 810
Score = 150 (57.9 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 52/183 (28%), Positives = 72/183 (39%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGC-VRGVCS 240
C ++C + H CD ++ C + G C C GY + G C C +GC G C
Sbjct: 474 CTEHDDCGSGQHNCD-KNAICTNTVQGHSCTCQPGYVGN--GTVCKAFCEEGCRYGGTCV 530
Query: 241 EPDKCQCDFGYVGVNCSIQC-QC-NGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVG 298
P+KC C G+ G +C +C G +C RC N C+ C +
Sbjct: 531 APNKCVCPSGFTGSHCEKDIDECAEGFVECHNHS------RCVNLPGWYHCE-CRSGFHD 583
Query: 299 DPRDN--GE-CVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCM 355
D + GE C+ E C T C N S A + + GG L GP+ C
Sbjct: 584 DGTYSLSGESCIDIDE-CALRTHTCWNDS-ACINLA---GGFDCLCP---SGPSCSGDCP 635
Query: 356 HCG 358
H G
Sbjct: 636 HEG 638
>UNIPROTKB|J3KNC5 [details] [associations]
symbol:NELL1 "Protein kinase C-binding protein NELL1"
species:9606 "Homo sapiens" [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001007
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00093 Pfam:PF07645
PROSITE:PS01187 PROSITE:PS01208 PROSITE:PS50026 PROSITE:PS50184
SMART:SM00179 SMART:SM00181 SMART:SM00214 InterPro:IPR000152
EMBL:CH471064 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 Pfam:PF02210 Pfam:PF12661 SMART:SM00210
InterPro:IPR024731 Pfam:PF12947 EMBL:AC010811 EMBL:AC067794
EMBL:AC069575 EMBL:AC087279 EMBL:AC090707 EMBL:AC090857
EMBL:AC099730 EMBL:AC105190 EMBL:AC108460 UniGene:Hs.657172
HGNC:HGNC:7750 OMA:GSHCEKD ProteinModelPortal:J3KNC5
Ensembl:ENST00000298925 Uniprot:J3KNC5
Length = 838
Score = 150 (57.9 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 53/187 (28%), Positives = 76/187 (40%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGC-VRGVCS 240
C +EC + H CD ++ C + G C C GY + G C C +GC G C
Sbjct: 502 CTEHDECGSGQHNCD-ENAICTNTVQGHSCTCKPGYVGN--GTICRAFCEEGCRYGGTCV 558
Query: 241 EPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKG---P---QCDKCEP 294
P+KC C G+ G +C +C+ + + CHNH++ P C+ C
Sbjct: 559 APNKCVCPSGFTGSHCEKDID-----ECS-----EGIIECHNHSRCVNLPGWYHCE-CRS 607
Query: 295 LYVGDPRDN--GE-CVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTR 351
+ D + GE C+ E C T C N S A + + GG L GP+
Sbjct: 608 GFHDDGTYSLSGESCIDIDE-CALRTHTCWNDS-ACINLA---GGFDCLCP---SGPSCS 659
Query: 352 ARCMHCG 358
C H G
Sbjct: 660 GDCPHEG 666
>UNIPROTKB|Q04721 [details] [associations]
symbol:NOTCH2 "Neurogenic locus notch homolog protein 2"
species:9606 "Homo sapiens" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0002437 "inflammatory response to antigenic
stimulus" evidence=IEA] [GO:0006959 "humoral immune response"
evidence=IEA] [GO:0007368 "determination of left/right symmetry"
evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA] [GO:0060674 "placenta blood vessel development"
evidence=IEA] [GO:0072602 "interleukin-4 secretion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0030097 "hemopoiesis"
evidence=TAS] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=NAS] [GO:0001709 "cell fate determination" evidence=TAS]
[GO:0009986 "cell surface" evidence=IDA] [GO:0004872 "receptor
activity" evidence=NAS] [GO:0009887 "organ morphogenesis"
evidence=IEP] [GO:0043066 "negative regulation of apoptotic
process" evidence=TAS] [GO:0006917 "induction of apoptosis"
evidence=TAS] [GO:0019827 "stem cell maintenance" evidence=TAS]
[GO:0007050 "cell cycle arrest" evidence=IDA] [GO:0016049 "cell
growth" evidence=IDA] [GO:0046579 "positive regulation of Ras
protein signal transduction" evidence=IDA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IDA] [GO:0007399
"nervous system development" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0046849 "bone remodeling"
evidence=IMP] [GO:0000139 "Golgi membrane" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0007220 "Notch receptor processing" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0003184 "pulmonary
valve morphogenesis" evidence=IMP] [GO:0060413 "atrial septum
morphogenesis" evidence=IMP] [GO:0061314 "Notch signaling involved
in heart development" evidence=IC] Reactome:REACT_2001
Reactome:REACT_691 Reactome:REACT_71 InterPro:IPR002110
InterPro:IPR000742 InterPro:IPR000800 InterPro:IPR001881
InterPro:IPR008297 InterPro:IPR010660 InterPro:IPR011656
InterPro:IPR018097 Pfam:PF00008 Pfam:PF00023 Pfam:PF00066
Pfam:PF06816 Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279
PRINTS:PR01452 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088
PROSITE:PS50258 SMART:SM00004 SMART:SM00179 SMART:SM00181
SMART:SM00248 InterPro:IPR000152 Reactome:REACT_111102
GO:GO:0043066 GO:GO:0005576 GO:GO:0008285 GO:GO:0007399
GO:GO:0005654 GO:GO:0009986 GO:GO:0000139 GO:GO:0005887
GO:GO:0006917 GO:GO:0006355 GO:GO:0002437 GO:GO:0005789
eggNOG:COG0666 GO:GO:0016049 GO:GO:0046849 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0005509 GO:GO:0004872 GO:GO:0007050 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0030326 GO:GO:0007368 PROSITE:PS01186
GO:GO:0007220 GO:GO:0042246 EMBL:AL359752 GO:GO:0030097
PROSITE:PS00010 GO:GO:0006959 GO:GO:0006367 GO:GO:0001709
GO:GO:0046579 GO:GO:0019827 Reactome:REACT_2155 GO:GO:0060413
GO:GO:0002011 GO:GO:0061314 GO:GO:0072602 SUPFAM:SSF90193
GO:GO:0003184 HOGENOM:HOG000234369 HOVERGEN:HBG052650 KO:K02599
InterPro:IPR024600 Pfam:PF11936 EMBL:AF308601 EMBL:AF315356
EMBL:AL512503 EMBL:AL596222 EMBL:U77493 IPI:IPI00297655
RefSeq:NP_001186930.1 RefSeq:NP_077719.2 UniGene:Hs.487360 PDB:2OO4
PDBsum:2OO4 ProteinModelPortal:Q04721 SMR:Q04721 IntAct:Q04721
MINT:MINT-1187009 STRING:Q04721 PhosphoSite:Q04721 DMDM:143811429
PaxDb:Q04721 PRIDE:Q04721 Ensembl:ENST00000256646
Ensembl:ENST00000581899 GeneID:4853 KEGG:hsa:4853 UCSC:uc001eik.3
CTD:4853 GeneCards:GC01M120454 HGNC:HGNC:7882 MIM:102500 MIM:600275
MIM:610205 neXtProt:NX_Q04721 Orphanet:955 Orphanet:261629
PharmGKB:PA31684 InParanoid:Q04721 OrthoDB:EOG4Q58NH
PhylomeDB:Q04721 ChiTaRS:NOTCH2 EvolutionaryTrace:Q04721
GenomeRNAi:4853 NextBio:18692 ArrayExpress:Q04721 Bgee:Q04721
CleanEx:HS_NOTCH2 Genevestigator:Q04721 GermOnline:ENSG00000134250
InterPro:IPR022336 PRINTS:PR01985 Uniprot:Q04721
Length = 2471
Score = 146 (56.5 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 60/204 (29%), Positives = 77/204 (37%)
Query: 188 CLNDHHTCDPQS----EQCVDLADGFECVCGRGYNKS---EEGGECV--PVCSQG-CVRG 237
C N+ + C S CVD + F C+C G+ S E EC P ++G CV G
Sbjct: 984 CENNINECTESSCFNGGTCVDGINSFSCLCPVGFTGSFCLHEINECSSHPCLNEGTCVDG 1043
Query: 238 VCSEPDKCQCDFGYVGVNCSIQ---CQ---CNGHADCAGPDKLDVCLRCHNHTKGPQCDK 291
+ + +C C GY G NC C C C CL C + G CD
Sbjct: 1044 LGTY--RCSCPLGYTGKNCQTLVNLCSRSPCKNKGTCVQKKAESQCL-CPSGWAGAYCDV 1100
Query: 292 CEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTR 351
P D + V C H+G+CINA P S LDE +
Sbjct: 1101 --PNVSCDIAASRRGVLVEHLCQ-HSGVCINAGNTHYCQCPLGYTGSYCEEQLDECASNP 1157
Query: 352 ARCMH---CGNHTTGPKCEDCVEG 372
C H C + G +CE CV G
Sbjct: 1158 --CQHGATCSDFIGGYRCE-CVPG 1178
Score = 132 (51.5 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 51/204 (25%), Positives = 86/204 (42%)
Query: 186 NECLNDHHTCDPQSEQCVDLADGFECVCGRG-YNKS--EEGGECVPVCSQGCVRGVCS-- 240
+EC ++ C + C++ +GF C+C G ++ S + EC+ S C+ G C+
Sbjct: 684 DECASN--PCR-KGATCINGVNGFRCICPEGPHHPSCYSQVNECL---SNPCIHGNCTGG 737
Query: 241 -EPDKCQCDFGYVGVNCSI---QCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLY 296
KC CD G+VG+NC + +C N + D L RC KG + C+ +
Sbjct: 738 LSGYKCLCDAGWVGINCEVDKNECLSNPCQNGGTCDNLVNGYRC-TCKKGFKGYNCQ-VN 795
Query: 297 VGDPRDNGECV---PCSEYCNGHTGLCI---NASLASLPFSPESGGTSELAAFLDEGPTT 350
+ + N C+ C + +G+T C+ +P S E AA E P
Sbjct: 796 IDECASN-PCLNQGTCFDDISGYTCHCVLPYTGKNCQTVLAPCSPNPCENAAVCKESPNF 854
Query: 351 RARCMHCGNHTTGPKC----EDCV 370
+ C G +C ++C+
Sbjct: 855 ESYTCLCAPGWQGQRCTIDIDECI 878
Score = 59 (25.8 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 25/83 (30%), Positives = 36/83 (43%)
Query: 53 CLTSSGGEGGWHECRWSSMLNECIS-PSYEALYCAGGVCGLVLGPHQAPQCPRSCSAYTQ 111
C+ S G G C ++EC S P + C GV G + P P SC Y+Q
Sbjct: 668 CVCSPGFTG--QRCNID--IDECASNPCRKGATCINGVNGFRCICPEGPHHP-SC--YSQ 720
Query: 112 CSTCLRHAHCGWCALQRDTTGGM 134
+ CL + C + + TGG+
Sbjct: 721 VNECLSNP-C----IHGNCTGGL 738
Score = 49 (22.3 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 19/67 (28%), Positives = 26/67 (38%)
Query: 36 TGSSCPLRCDQ--RTDCQDCLTSSGGEGGW--------HECRWSSMLNECIS-PSYEALY 84
TG C + D+ C+ T G G+ H S +NEC+S P
Sbjct: 675 TGQRCNIDIDECASNPCRKGATCINGVNGFRCICPEGPHHPSCYSQVNECLSNPCIHG-N 733
Query: 85 CAGGVCG 91
C GG+ G
Sbjct: 734 CTGGLSG 740
Score = 41 (19.5 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 62 GWHECRWSSMLNECISPSYEALYCAG-GVCGLVLGPHQAPQCP 103
GW R + ++ECIS C G+C G + +CP
Sbjct: 864 GWQGQRCTIDIDECISKP-----CMNHGLCHNTQGSYMC-ECP 900
>RGD|1309399 [details] [associations]
symbol:Lamc3 "laminin gamma 3" species:10116 "Rattus norvegicus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=ISO] [GO:0005604 "basement membrane" evidence=ISO]
[GO:0007601 "visual perception" evidence=ISO] [GO:0014002
"astrocyte development" evidence=ISO] [GO:0060041 "retina
development in camera-type eye" evidence=ISO] RGD:1309399
GO:GO:0007601 GO:GO:0060041 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 OrthoDB:EOG498TZW EMBL:AC105586 IPI:IPI00950417
Ensembl:ENSRNOT00000066978 UCSC:RGD:1309399 ArrayExpress:D3ZYW4
Uniprot:D3ZYW4
Length = 1580
Score = 153 (58.9 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 37/118 (31%), Positives = 52/118 (44%)
Query: 259 QCQCNGHADCAGPDKL-DVCLRCHNHTKGPQCDKCEPLYVGDP------RDNGECVPCSE 311
+C+CNGHA GP++ + C ++T G C++C P + P D EC+PC+
Sbjct: 279 RCKCNGHASACGPNEAGQLACHCQHNTTGVDCERCLPFFQDRPWARGTAEDANECLPCN- 337
Query: 312 YCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDC 369
C+GH+ C F EL G C C +HT GP CE C
Sbjct: 338 -CSGHSEECT--------FD------RELYRSTGHG----GHCQRCRDHTAGPHCEHC 376
>FB|FBgn0028543 [details] [associations]
symbol:nimB2 "nimrod B2" species:7227 "Drosophila
melanogaster" [GO:0007498 "mesoderm development" evidence=IEP]
[GO:0005576 "extracellular region" evidence=ISM;ISS] [GO:0042742
"defense response to bacterium" evidence=ISS] [GO:0051635
"bacterial cell surface binding" evidence=ISS] InterPro:IPR000742
SMART:SM00181 GO:GO:0005576 EMBL:AE014134 GO:GO:0007498
GO:GO:0042742 GO:GO:0051635 InterPro:IPR009030 SUPFAM:SSF57184
GeneTree:ENSGT00660000095436 HSSP:P02876 EMBL:BT012496
RefSeq:NP_723857.1 UniGene:Dm.12414 SMR:Q7KTA1
EnsemblMetazoa:FBtr0080618 GeneID:260645 KEGG:dme:Dmel_CG31839
UCSC:CG31839-RA CTD:260645 FlyBase:FBgn0028543 eggNOG:NOG304867
InParanoid:Q7KTA1 OMA:SAPNFCI OrthoDB:EOG45MKMK ChiTaRS:nimB2
GenomeRNAi:260645 NextBio:843615 InterPro:IPR003341 Pfam:PF02363
Uniprot:Q7KTA1
Length = 421
Score = 145 (56.1 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 47/151 (31%), Positives = 67/151 (44%)
Query: 178 NYVKCPPENEC--LNDHH-----TCDPQSEQCVD---LADGFECVCGRGYNKSEEGGECV 227
++ +C N+C L+ + +C+P + C + A G C C GY K + G C
Sbjct: 258 SFGRCVAPNKCACLDGYRLAADGSCEPVCDSCENGKCTAPG-HCNCNAGYLKLQ--GRCE 314
Query: 228 PVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGP 287
P+CS C G C PD C+C G+ S +C C P VC+ N+
Sbjct: 315 PICSIPCKNGRCIGPDICECASGFEWDRKSAECL----PKCDLPCLNGVCVG--NN---- 364
Query: 288 QCDKCEPLYVGDPRDNGECVP-CSEYC-NGH 316
QCD C+ YV D C P C + C NG+
Sbjct: 365 QCD-CKTGYVRDEHQRNICQPHCPQGCQNGY 394
Score = 137 (53.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 37/115 (32%), Positives = 54/115 (46%)
Query: 211 CVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGY-----VGVNCSIQCQ--CN 263
CVC G+ ++ EG +C+ C GC GVC E ++C+C GY C +C+ C+
Sbjct: 200 CVCIPGHVRTAEG-KCISTCPLGCGNGVCDERNECKCREGYSLEPETRKYCQPECKPGCS 258
Query: 264 GHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTG 318
C P+K CL + CEP V D +NG+C +CN + G
Sbjct: 259 -FGRCVAPNKC-ACLDGYRLAAD---GSCEP--VCDSCENGKCT-APGHCNCNAG 305
Score = 124 (48.7 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 32/102 (31%), Positives = 43/102 (42%)
Query: 210 ECVCGRGYNKSEEGGE-CVPVCSQGCVRGVCSEPDKCQCDFGY---VGVNCSIQCQCNGH 265
EC C GY+ E + C P C GC G C P+KC C GY +C C +
Sbjct: 232 ECKCREGYSLEPETRKYCQPECKPGCSFGRCVAPNKCACLDGYRLAADGSCEPVCDSCEN 291
Query: 266 ADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECV 307
C P + C + +G +CEP+ P NG C+
Sbjct: 292 GKCTAPGHCN-CNAGYLKLQG----RCEPI-CSIPCKNGRCI 327
Score = 106 (42.4 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 23/70 (32%), Positives = 32/70 (45%)
Query: 211 CVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVN-----CSIQCQ--C- 262
C C G+ + EC+P C C+ GVC ++C C GYV C C C
Sbjct: 332 CECASGFEWDRKSAECLPKCDLPCLNGVCVGNNQCDCKTGYVRDEHQRNICQPHCPQGCQ 391
Query: 263 NGHADCAGPD 272
NG+ C+ P+
Sbjct: 392 NGY--CSAPN 399
Score = 103 (41.3 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 21/55 (38%), Positives = 28/55 (50%)
Query: 210 ECVCGRGYNKSE-EGGECVPVCSQGCVRGVCSEPDKCQCDFGYV--GVNCSIQCQ 261
+C C GY + E + C P C QGC G CS P+ C C G++ G+ CQ
Sbjct: 365 QCDCKTGYVRDEHQRNICQPHCPQGCQNGYCSAPNFCICRPGFIKSGIKGRQTCQ 419
Score = 54 (24.1 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 29/102 (28%), Positives = 40/102 (39%)
Query: 38 SSCPLRC-----DQRTDCQDCLTSSGGEGGWH-----ECRWSSMLNECISPSYEALYCAG 87
S+CPL C D+R +C+ C E EC+ C++P+ A C
Sbjct: 216 STCPLGCGNGVCDERNECK-CREGYSLEPETRKYCQPECKPGCSFGRCVAPNKCA--CLD 272
Query: 88 GVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHC--GWCALQ 127
G L P C SC +C T H +C G+ LQ
Sbjct: 273 GY-RLAADGSCEPVCD-SCEN-GKC-TAPGHCNCNAGYLKLQ 310
>UNIPROTKB|F1RIQ1 [details] [associations]
symbol:NTN5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 OMA:GGPFLLT
EMBL:CU929759 Ensembl:ENSSSCT00000003491 Uniprot:F1RIQ1
Length = 489
Score = 147 (56.8 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 43/122 (35%), Positives = 53/122 (43%)
Query: 259 QCQCNGHAD-CAGPDKLDVCLRCHNHTKGPQCDKCEPLY------VGDPRDNGECVPCSE 311
+CQC+GHA CA + C RC +HT GP C+ C P + P+ C+PCS
Sbjct: 156 RCQCHGHAARCAARAQPPRC-RCRHHTTGPGCESCRPSHRDWPWRPATPQHPHPCLPCS- 213
Query: 312 YCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCV 370
CN H C N+ L L +SGG E RC H HT G C C
Sbjct: 214 -CNQHARRCRFNSELFRLS-GGQSGGVCE-------------RCRH---HTAGRHCHYCQ 255
Query: 371 EG 372
G
Sbjct: 256 PG 257
Score = 40 (19.1 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 10/32 (31%), Positives = 12/32 (37%)
Query: 75 CISPSYEALYCAGGVCGLVLGPHQAPQCPRSC 106
C P +C V L A CPR+C
Sbjct: 19 CYHPGGRPRFCLPPVTQLAA---MAASCPRAC 47
>ZFIN|ZDB-GENE-000329-5 [details] [associations]
symbol:notch3 "notch homolog 3" species:7955 "Danio
rerio" [GO:0030154 "cell differentiation" evidence=IEA] [GO:0050793
"regulation of developmental process" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA;IGI] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0050768
"negative regulation of neurogenesis" evidence=IEP] [GO:0035019
"somatic stem cell maintenance" evidence=IEP] [GO:0048259
"regulation of receptor-mediated endocytosis" evidence=IGI]
[GO:0048793 "pronephros development" evidence=IMP] [GO:0001889
"liver development" evidence=IGI;IMP] [GO:0001840 "neural plate
development" evidence=IGI] [GO:0048936 "peripheral nervous system
neuron axonogenesis" evidence=IGI] [GO:0021654 "rhombomere boundary
formation" evidence=IGI] InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
InterPro:IPR022331 Pfam:PF00008 Pfam:PF00066 Pfam:PF06816
Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279 PRINTS:PR01452
PRINTS:PR01986 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088
PROSITE:PS50258 SMART:SM00004 SMART:SM00179 SMART:SM00181
SMART:SM00248 InterPro:IPR000152 ZFIN:ZDB-GENE-000329-5
GO:GO:0016021 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0007219 GO:GO:0005509
GO:GO:0001889 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
GO:GO:0035019 PROSITE:PS00010 HSSP:P07207 GO:GO:0048259
GO:GO:0050768 GO:GO:0048793 Pfam:PF12661 GO:GO:0001840
SUPFAM:SSF90193 GO:GO:0048936 HOGENOM:HOG000234369
HOVERGEN:HBG052650 KO:K02599 InterPro:IPR024600 Pfam:PF11936
CTD:4854 GO:GO:0021654 EMBL:AF152001 IPI:IPI00498136
RefSeq:NP_571624.2 UniGene:Dr.75827 ProteinModelPortal:Q800E4
SMR:Q800E4 STRING:Q800E4 PRIDE:Q800E4 GeneID:58066 KEGG:dre:58066
InParanoid:Q800E4 NextBio:20892327 ArrayExpress:Q800E4 Bgee:Q800E4
Uniprot:Q800E4
Length = 2468
Score = 154 (59.3 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 90/371 (24%), Positives = 134/371 (36%)
Query: 36 TGSSCPLRCDQ--RTDCQD---CLTSSGGEGGWHECR----WSSMLNECISPSYEALYCA 86
TG+ C + D+ T CQ+ C+ G +ECR + L E + + C
Sbjct: 476 TGTMCQIDIDECASTPCQNGAKCIDRPNG----YECRCAEGFEGRLCESNIDNCKPDPCH 531
Query: 87 GGVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTXXXXXXXX 146
G C + + C + Y +C L H C GG V
Sbjct: 532 HGTCVDGIASYTC-NCEPGYTGY-RCENQLNECHSNPCQ-----NGGKCVDLVNKYICQC 584
Query: 147 XXXXXXT-CDILFYQTYPDQVIEVNNNDSFSWNYVKCPPE---NECLNDHHTC--DP--Q 198
T C+I F + D + C P +C ++ C +P
Sbjct: 585 QHGTSGTNCEINFDDCASNPCDYGICKDGINRYECVCKPGFTGPQCKDEIDECQSNPCRN 644
Query: 199 SEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVC-SEPD--KCQCDFGYVGVN 255
CVD +GF C C G++ + S C+ G C +P+ +C C+ G+VG N
Sbjct: 645 GGTCVDDENGFHCQCPEGFHDPYCYSQVDECASNPCLHGTCRDDPNGYRCDCEPGWVGKN 704
Query: 256 CSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDP-RDN-GECVPCSEYC 313
C + DC P C + G C KC + G+ + N EC S C
Sbjct: 705 CDLD-----RNDCL-PSPCQNAGTCFDQLNGFTC-KCRQGFRGNLCQVNINECA--SSPC 755
Query: 314 NGHTGLCIN--ASLASLPFSPESGGT-SELAAFLDEGP-TTRARCMHCGNHTTGPKCEDC 369
G C++ AS L P SG T +EL P A C+H ++ G +C +C
Sbjct: 756 LNQ-GTCVDGVASFTCLCEPPYSGPTCAELLTPCSPNPCANHASCVHTPDYL-GYQC-NC 812
Query: 370 VEGKENRQSRN 380
G + N
Sbjct: 813 QPGWQGHLCNN 823
Score = 129 (50.5 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 53/167 (31%), Positives = 69/167 (41%)
Query: 181 KCPPE-NECLNDHHTCDPQSE-QCVDLADGFECVCGRGYNKSEEGGEC---VPVC-SQGC 234
+C + NECL++ C+P + C+ L + ++CVC G+ G C VC SQ C
Sbjct: 1218 RCEGDINECLSN--PCNPSNSLDCIQLPNDYQCVCKPGFT----GRGCQSRFSVCESQPC 1271
Query: 235 VRG-VCS----EPD--KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGP 287
G VCS P C C GY G NC C C C T+G
Sbjct: 1272 KNGGVCSLSGSSPPGYSCTCQLGYAGSNCERSMNCK-ELPCYNGGS------CTLTTRGA 1324
Query: 288 QCDKCEPLYVG---DPRDNGECVPCSEYC-NGHTGLCINASLASLPF 330
+C C + G R N C S+ C NG GLC + S PF
Sbjct: 1325 RCT-CIQGFGGPLCQHRSNDGC--SSKPCHNG--GLCTEET--SYPF 1364
Score = 45 (20.9 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 21/74 (28%), Positives = 29/74 (39%)
Query: 24 KTDANRTNIKLKTGSSCPLRCDQRTDCQDCLTSSGG-----EGGWHECRWSSMLNE--CI 76
K NR K G + P D+ +CQ +GG E G+H C+ ++ C
Sbjct: 611 KDGINRYECVCKPGFTGPQCKDEIDECQSNPCRNGGTCVDDENGFH-CQCPEGFHDPYCY 669
Query: 77 SPSYEALYCAGGVC 90
S E CA C
Sbjct: 670 SQVDE---CASNPC 680
>FB|FBgn0027594 [details] [associations]
symbol:drpr "draper" species:7227 "Drosophila melanogaster"
[GO:0007155 "cell adhesion" evidence=ISS] [GO:0008345 "larval
locomotory behavior" evidence=IMP] [GO:0006909 "phagocytosis"
evidence=IMP;TAS] [GO:0031224 "intrinsic to membrane" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016322 "neuron
remodeling" evidence=IMP] [GO:0035212 "cell competition in a
multicellular organism" evidence=IMP] [GO:0048190 "wing disc
dorsal/ventral pattern formation" evidence=IGI] [GO:0043277
"apoptotic cell clearance" evidence=IMP] [GO:0035071 "salivary
gland cell autophagic cell death" evidence=IMP] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
GO:GO:0048190 EMBL:AE014296 GO:GO:0016322 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 GO:GO:0008345 GO:GO:0035071
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 GO:GO:0031224
GO:GO:0043277 Pfam:PF12661 GO:GO:0035212
GeneTree:ENSGT00690000101914 RefSeq:NP_728660.2 UniGene:Dm.3167
ProteinModelPortal:Q9W0A0 SMR:Q9W0A0 DIP:DIP-19640N
MINT:MINT-7555415 STRING:Q9W0A0 EnsemblMetazoa:FBtr0072799
GeneID:38218 KEGG:dme:Dmel_CG2086 UCSC:CG2086-RB CTD:38218
FlyBase:FBgn0027594 InParanoid:Q9W0A0 OMA:ALCDHIS OrthoDB:EOG4RXWF6
ChiTaRS:drpr GenomeRNAi:38218 NextBio:807575 Bgee:Q9W0A0
Uniprot:Q9W0A0
Length = 1031
Score = 150 (57.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 59/173 (34%), Positives = 70/173 (40%)
Query: 213 CGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGY-------------VGVNCSIQ 259
C GY S GECVP CS+ C G C P+KC+CD GY G NCS+Q
Sbjct: 87 CCDGYIAS--AGECVPHCSEPCQHGRCISPEKCKCDHGYGGPACDINCPPGWYGRNCSMQ 144
Query: 260 CQCNGHADCAGPDKLDVCLRCHNHTKGPQC-DKCEPLYVGDPRDNGECVPCSEYCNGHTG 318
C C +A C P D C C G +C D C + G CSE C G
Sbjct: 145 CDCLNNAVCE-PFSGD-C-ECAKGYTGARCADICPEGFFG--------ANCSEKCRCENG 193
Query: 319 -LCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCE-DC 369
C + S +P G T GP RC G H G +C+ DC
Sbjct: 194 GKCHHVS-GECQCAP--GFT---------GPLCDMRCPD-GKH--GAQCQQDC 231
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 55/203 (27%), Positives = 77/203 (37%)
Query: 181 KCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGV-C 239
+C + C ND C P++ C+ VC G C C C +G C
Sbjct: 226 QCQQDCPCQNDGK-CQPETGACMCNPGWTGDVCANKCPVGSYGPGCQESCE--CYKGAPC 282
Query: 240 SE-PDKCQCDFGYVGVNCSIQCQCNGHA-------DCAGPDKLD----VCLRCHNHTKGP 287
+C+C GY G C +CQ N + DCA D C+ C+ G
Sbjct: 283 HHITGQCECPPGYRGERCFDECQLNTYGFNCSMTCDCANDAMCDRANGTCI-CNPGWTGA 341
Query: 288 QCDK--CEPLYVG-DPRDNGEC-VPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAF 343
+C + CE G D EC + ++ C+ TG C S+ +S S + F
Sbjct: 342 KCAERICEANKYGLDCNRTCECDMEHTDLCHPETGNC----QCSIGWS--SAQCTRPCTF 395
Query: 344 LDEGPTTRARCMHCGNHTTGPKC 366
L GP C +C N G KC
Sbjct: 396 LRYGPNCELTC-NCKN---GAKC 414
Score = 123 (48.4 bits), Expect = 0.00035, P = 0.00035
Identities = 76/300 (25%), Positives = 109/300 (36%)
Query: 88 GVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTXXXXXXXXX 147
G C G + P C SC T C C A TG +CT
Sbjct: 419 GTCLCAPG-WRGPTCEESCEPGTFGQDCALRCDCQNGAKCEPETGQC-LCTAGWKNIKCD 476
Query: 148 XXXXXTCDILFYQTYPDQVIEVNNNDSFSWNYVKCPPEN-ECLNDHHTCDPQSEQCVDLA 206
CD+ + +V + +NN + C P+N C + E+ D
Sbjct: 477 R----PCDLNHFGQDCAKVCDCHNNAA-------CNPQNGSCTCAAGWTGERCERKCDTG 525
Query: 207 D-GFECV--CGRGYNKS----EEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQ 259
G +C C +N S G CV C Q GV E + C GY G NC
Sbjct: 526 KFGHDCAQKCQCDFNNSLACDATNGRCV--CKQDW-GGVHCETN---CRSGYYGENCDKV 579
Query: 260 CQCNGHADCAGPDKLDVCLRCHNHTKGPQC-DKCEPLYVG-DPRDN-GECVPCSEYCNGH 316
C+C ++ C PD + C+ C G C + C P + G + ++ E + ++ C+
Sbjct: 580 CRCLNNSSC-DPDSGN-CI-CSAGWTGADCAEPCPPGFYGMECKERCPEILHGNKSCDHI 636
Query: 317 TG--LCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCG--NHTTGPKCEDCVEG 372
TG LC + P G G + C H G NH TG +C+ C+ G
Sbjct: 637 TGEILCRTGYIGLTCEHPCPAG------LYGPGCKLKCNCEHGGECNHVTG-QCQ-CLPG 688
>UNIPROTKB|F1N0T1 [details] [associations]
symbol:Bt.54919 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0000904 "cell morphogenesis involved in
differentiation" evidence=IEA] GO:GO:0007601 GO:GO:0060041
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 GO:GO:0014002 GO:GO:0000904
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GeneTree:ENSGT00690000102103 OMA:QRGRRCE EMBL:DAAA02032247
EMBL:DAAA02032248 EMBL:DAAA02032249 EMBL:DAAA02032250
EMBL:DAAA02032251 EMBL:DAAA02032252 EMBL:DAAA02032253
EMBL:DAAA02032254 IPI:IPI00698418 Ensembl:ENSBTAT00000023245
Uniprot:F1N0T1
Length = 1585
Score = 152 (58.6 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 38/114 (33%), Positives = 52/114 (45%)
Query: 259 QCQCNGHADCAGPDKLD-VCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHT 317
+C+CNGHA GPD+ + RC ++T G C++C P + P G +E
Sbjct: 283 RCKCNGHASECGPDEEGRLACRCQHNTTGTDCERCLPFFQDRPWARGTAEAANE------ 336
Query: 318 GLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCVE 371
C+ + + S E EL F G RC+HC HT GP CE C E
Sbjct: 337 --CLPCNCSG--HSEECTFDREL--FRSSGHG--GRCLHCRAHTAGPHCERCQE 382
Score = 124 (48.7 bits), Expect = 0.00045, P = 0.00045
Identities = 32/93 (34%), Positives = 43/93 (46%)
Query: 230 CSQGCVRGVCSE--PD-KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKG 286
C QG C P K G +C + C CN H C P+ VCL C +HT+G
Sbjct: 689 CPQGYTGQFCESCAPGYKRNTPLGGPYASC-VPCTCNQHGTC-DPNT-GVCL-CGHHTEG 744
Query: 287 PQCDKCEPLYVGDPRDN--GECVPCSEYCNGHT 317
P C++C P + G+P +C PC C G +
Sbjct: 745 PSCERCLPGFYGNPFTGQADDCQPCP--CPGQS 775
Score = 99 (39.9 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 36/149 (24%), Positives = 56/149 (37%)
Query: 188 CLNDH-HTCDPQSEQCVDLADGFE-------CVC---GRGYNKSEEGGECVPVCSQGCVR 236
CL+ HT P E+C + + C C G + ++ G CV C +
Sbjct: 365 CLHCRAHTAGPHCERCQENFYRWSPQTPCQPCDCHPAGSLRLQCDDLGTCV--CKPTVMG 422
Query: 237 GVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEP-L 295
C D+C F + C CN D C + +G CD+C P
Sbjct: 423 WKC---DRCLSGFHSLSEGGCRPCTCNPVGSLGTCDPRSGRCHCKENVEGSLCDRCRPGA 479
Query: 296 YVGDPRDNGECVPCSEYCNGHTGLCINAS 324
+ P + C C +C GH+ +C+ A+
Sbjct: 480 FNLQPHNPAGCSSC--FCYGHSKVCVAAA 506
Score = 71 (30.1 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 348 PTTRARCMHCGNHTTGPKCEDCVEG 372
P T C+ CG+HT GP CE C+ G
Sbjct: 731 PNTGV-CL-CGHHTEGPSCERCLPG 753
>UNIPROTKB|F1MJM5 [details] [associations]
symbol:LTBP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 PROSITE:PS00010
GeneTree:ENSGT00700000104076 Gene3D:3.90.290.10 InterPro:IPR017878
Pfam:PF00683 SUPFAM:SSF57581 PROSITE:PS51364 EMBL:DAAA02030450
EMBL:DAAA02030451 EMBL:DAAA02030452 EMBL:DAAA02030453
EMBL:DAAA02030454 EMBL:DAAA02030455 EMBL:DAAA02030456
EMBL:DAAA02030457 EMBL:DAAA02030458 EMBL:DAAA02030459
EMBL:DAAA02030460 EMBL:DAAA02030461 EMBL:DAAA02030462
EMBL:DAAA02030463 EMBL:DAAA02030464 EMBL:DAAA02030465
EMBL:DAAA02030466 EMBL:DAAA02030467 EMBL:DAAA02030468
EMBL:DAAA02030469 EMBL:DAAA02030470 IPI:IPI00824031
Ensembl:ENSBTAT00000055559 Uniprot:F1MJM5
Length = 1338
Score = 146 (56.5 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 50/172 (29%), Positives = 70/172 (40%)
Query: 173 DSFSWNYV--KCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVC 230
D + +N KC +EC D H C +C + F C+C G+ SEEG C+ V
Sbjct: 521 DGYKFNEQQRKCVDIDECAQDQHLCS--QGRCENTEGSFLCICPAGFMASEEGTNCIDV- 577
Query: 231 SQGCVR-GVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGP-DKLDVCLRCHNHTKGPQ 288
C+R VC E C G C C H G + +D CL + P
Sbjct: 578 -DECLRPDVCGE-GHCVNTMG--AFRCEY-CDSGYHMTPGGQCEDVDECL---TPSTCPD 629
Query: 289 CDKCEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSEL 340
++C V P + +CVPC+E G G C++ P +G S L
Sbjct: 630 -EQC----VNSP-GSYQCVPCTEGFRGWNGQCLDVDECLEPKICTNGTCSNL 675
Score = 129 (50.5 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 48/163 (29%), Positives = 69/163 (42%)
Query: 177 WNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG- 233
WN +C +ECL + C + C +L + C C +GY+ + + C + C QG
Sbjct: 651 WNG-QCLDVDECL-EPKICT--NGTCSNLEGSYMCSCHKGYSPTPDHKHCEDIDECQQGT 706
Query: 234 -CVRGVCSEPD---KCQCDFGYVGVNCSIQCQ----CNGHADCAGPDKLDVCLRCHNHTK 285
C+ G C D +C C GY QC+ C H C+ +C N T+
Sbjct: 707 MCMNGQCKNTDGSFRCTCGQGYQLSAAKDQCEDIDECQHHHLCSNG-------QCRN-TE 758
Query: 286 GP-QCDKCEPLY----VGDP-RDNGECVPCSEYCNGHTGLCIN 322
G +C C+ Y +GD D EC+ C G G CIN
Sbjct: 759 GSFRC-VCDHGYRASALGDHCEDINECLEDKSVCQG--GDCIN 798
Score = 115 (45.5 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 51/190 (26%), Positives = 80/190 (42%)
Query: 156 ILFYQTYPDQVIEVNNNDSFSW-NYVKCPPE----NECLNDHHTCDPQSEQCVDLADGFE 210
++ +T P +EV S S + V P + NEC + C + C++L +
Sbjct: 459 VVIEKTSPPMPVEVAPEASTSSASQVIAPTQVTEINECTVNPDICG--AGHCINLPVRYT 516
Query: 211 CVCGRGYNKSEEGGECVPV--CSQG---CVRGVCSEPDK---CQCDFGYV----GVNCSI 258
C+C GY +E+ +CV + C+Q C +G C + C C G++ G NC I
Sbjct: 517 CICYDGYKFNEQQRKCVDIDECAQDQHLCSQGRCENTEGSFLCICPAGFMASEEGTNC-I 575
Query: 259 QCQCNGHADCAGPDKLDVCLRCHN-HTKGP-QCDKCEPLYVGDPRDNGECVPCSEYCNGH 316
+C PD VC H +T G +C+ C+ Y P G+C E
Sbjct: 576 DVD-----ECLRPD---VCGEGHCVNTMGAFRCEYCDSGYHMTP--GGQCEDVDECLTPS 625
Query: 317 T---GLCINA 323
T C+N+
Sbjct: 626 TCPDEQCVNS 635
Score = 52 (23.4 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 15/55 (27%), Positives = 23/55 (41%)
Query: 13 QVAYTLEPRTVKTDANRTNIKLKTGSSCPLRCDQRTDCQDCLTSSGGEGGWHECR 67
QV + P KT R + GS C + +DC + G G+H+C+
Sbjct: 214 QVIPHVYPVAAKTQLGRC-FQETIGSQCGKALPGLSKQEDCCGTVGTSWGFHKCQ 267
Score = 39 (18.8 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 85 CAGGVCGLVLGPHQAPQCPRSCS 107
C G V G G H+ +CP+ S
Sbjct: 253 CCGTV-GTSWGFHKCQKCPKKPS 274
>RGD|68380 [details] [associations]
symbol:Ltbp2 "latent transforming growth factor beta binding
protein 2" species:10116 "Rattus norvegicus" [GO:0005509 "calcium
ion binding" evidence=IEA] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005615 "extracellular space" evidence=ISO]
[GO:0007179 "transforming growth factor beta receptor signaling
pathway" evidence=NAS] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0019838 "growth factor binding" evidence=IEA] [GO:0070062
"extracellular vesicular exosome" evidence=ISO] [GO:0031012
"extracellular matrix" evidence=ISO] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 Pfam:PF07645
PROSITE:PS00070 PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 RGD:68380 GO:GO:0005576
GO:GO:0008201 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0007179 PROSITE:PS01186 PROSITE:PS00010 InterPro:IPR009030
SUPFAM:SSF57184 Gene3D:3.90.290.10 InterPro:IPR017878 Pfam:PF00683
SUPFAM:SSF57581 PROSITE:PS51364 eggNOG:NOG318792 KO:K08023
HOGENOM:HOG000293153 HOVERGEN:HBG052370 CTD:4053 EMBL:Y12760
IPI:IPI00391111 RefSeq:NP_067597.2 UniGene:Rn.40921
ProteinModelPortal:O35806 STRING:O35806 PRIDE:O35806 GeneID:59106
KEGG:rno:59106 UCSC:RGD:68380 NextBio:611735 ArrayExpress:O35806
Genevestigator:O35806 GermOnline:ENSRNOG00000012094 Uniprot:O35806
Length = 1764
Score = 152 (58.6 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 66/212 (31%), Positives = 85/212 (40%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGG--ECVPV--CSQ-G-CV 235
C +NECL + C+ + +CV+ + C+C GY + G EC V C Q G C
Sbjct: 875 CTDDNECLRN--PCEGRG-RCVNSVGSYSCLCYPGYTLATLGDTQECQDVDECEQPGVCS 931
Query: 236 RGVCSEPD---KCQCDFGYVGV---NCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQC 289
G CS + C+CD GYV V +C +C C PD RC N C
Sbjct: 932 GGRCSNTEGSYHCECDQGYVMVRRGHCQDINECRHPGTC--PDG-----RCVNSPGSYTC 984
Query: 290 DKCEPLYVGDPRDNGECVPCSEYCN----GHTGLCINASLASLPFSPESGG--TSELAAF 343
CE Y+G +G CV +E H G CIN S S E G T +
Sbjct: 985 LACEEGYIGQ---SGNCVDMNECLTPGICAH-GRCINME-GSFRCSCEPGYELTPDKKGC 1039
Query: 344 LD-EGPTTRARCMH--CGNHTTGPKCEDCVEG 372
D + +RA C C N C C G
Sbjct: 1040 RDVDECASRASCPTGLCLNTEGSFTCSACQSG 1071
>UNIPROTKB|F1M7L7 [details] [associations]
symbol:Ltbp2 "Latent-transforming growth factor
beta-binding protein 2" species:10116 "Rattus norvegicus"
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 Pfam:PF07645
PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:68380 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 PROSITE:PS00010 InterPro:IPR009030
SUPFAM:SSF57184 GeneTree:ENSGT00700000104076 Gene3D:3.90.290.10
InterPro:IPR017878 Pfam:PF00683 SUPFAM:SSF57581 PROSITE:PS51364
IPI:IPI00391111 Ensembl:ENSRNOT00000031331 ArrayExpress:F1M7L7
Uniprot:F1M7L7
Length = 1764
Score = 152 (58.6 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 66/212 (31%), Positives = 85/212 (40%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGG--ECVPV--CSQ-G-CV 235
C +NECL + C+ + +CV+ + C+C GY + G EC V C Q G C
Sbjct: 875 CTDDNECLRN--PCEGRG-RCVNSVGSYSCLCYPGYTLATLGDTQECQDVDECEQPGVCS 931
Query: 236 RGVCSEPD---KCQCDFGYVGV---NCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQC 289
G CS + C+CD GYV V +C +C C PD RC N C
Sbjct: 932 GGRCSNTEGSYHCECDQGYVMVRRGHCQDINECRHPGTC--PDG-----RCVNSPGSYTC 984
Query: 290 DKCEPLYVGDPRDNGECVPCSEYCN----GHTGLCINASLASLPFSPESGG--TSELAAF 343
CE Y+G +G CV +E H G CIN S S E G T +
Sbjct: 985 LACEEGYIGQ---SGNCVDMNECLTPGICAH-GRCINME-GSFRCSCEPGYELTPDKKGC 1039
Query: 344 LD-EGPTTRARCMH--CGNHTTGPKCEDCVEG 372
D + +RA C C N C C G
Sbjct: 1040 RDVDECASRASCPTGLCLNTEGSFTCSACQSG 1071
>MGI|MGI:99915 [details] [associations]
symbol:Lamb3 "laminin, beta 3" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005604
"basement membrane" evidence=ISS;IDA] [GO:0005610 "laminin-5
complex" evidence=IDA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=ISO] [GO:0050873
"brown fat cell differentiation" evidence=IDA] MGI:MGI:99915
GO:GO:0050873 GO:GO:0007155 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 EMBL:CH466555 GO:GO:0005610
GeneTree:ENSGT00620000087753 CTD:3914 eggNOG:NOG289025
HOGENOM:HOG000113279 HOVERGEN:HBG052302 KO:K06244 OMA:RSQMEED
OrthoDB:EOG4JDH5Z ChiTaRS:LAMB3 EMBL:U43298 EMBL:AK155769
EMBL:BC008516 IPI:IPI00117093 RefSeq:NP_032510.2 UniGene:Mm.435441
ProteinModelPortal:Q61087 SMR:Q61087 STRING:Q61087
PhosphoSite:Q61087 PaxDb:Q61087 PRIDE:Q61087
Ensembl:ENSMUST00000016315 Ensembl:ENSMUST00000159955 GeneID:16780
KEGG:mmu:16780 InParanoid:Q91V90 NextBio:290632 Bgee:Q61087
CleanEx:MM_LAMB3 Genevestigator:Q61087
GermOnline:ENSMUSG00000026639 Uniprot:Q61087
Length = 1168
Score = 150 (57.9 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 60/221 (27%), Positives = 82/221 (37%)
Query: 168 EVNNNDSFSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGEC- 226
+V+ +W V+C P ++ N H T +DLA + K +E G+
Sbjct: 159 QVHQGQPKNWQDVRCRPLSQRPNGHLTGGKVQLNLMDLASAIPASQSK---KIQELGDIT 215
Query: 227 ---VPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDK---------L 274
V V S P F + C C+GHAD P+
Sbjct: 216 NLRVNFTKLAPVPQRGSYPPSAY--FAVSQLRLQGSCFCHGHADRCAPNPGGSTTAVQVN 273
Query: 275 DVCLRCHNHTKGPQCDKCEPLYVGDP------RDNGECVPCSEYCNGHTGLCINASLASL 328
+VC+ C ++T GP CD+C P Y P +D EC C CNGH+ C
Sbjct: 274 NVCV-CQHNTAGPNCDRCAPFYNNRPWRPAEGQDTHECQRCD--CNGHSETC-------- 322
Query: 329 PFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDC 369
F P A F T C +C +HT G CE C
Sbjct: 323 HFDP--------AVFAASQGTNGGVCDNCRDHTEGKNCERC 355
Score = 121 (47.7 bits), Expect = 0.00067, P = 0.00067
Identities = 60/206 (29%), Positives = 79/206 (38%)
Query: 195 CDP----QSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQ-CDF 249
CDP Q C D G +CVC + Y +G C +C G + P C CD
Sbjct: 378 CDPDGAVQGAPC-DRLTG-QCVC-KEY---VQGERC-DLCKPGFTGLTFANPKGCHACDC 430
Query: 250 GYVGVNCSIQCQCN-GHADC----AGPDKLDVCLRCH-NHTKGPQCDKC--EPLYVGDPR 301
+G + C+ G C GP K D C H G C+ C +P +
Sbjct: 431 SILGARKDMPCEEETGRCLCLPNVVGP-KCDQCAPSHWKLASGLGCEPCACDPRNSLSSQ 489
Query: 302 DN---GECVPCSEYCNGHTGLCINASLASLPFSPESG-GTSELAAFLD----EGP---TT 350
N G+C PC E G T C +A++ P T A D EGP
Sbjct: 490 CNQFTGQC-PCREGFGGLT--CSSAAIRQCPDQTYGHVATGCRACDCDFRGTEGPGCDKA 546
Query: 351 RARCMHCGNHTTGPKCEDCVEGKENR 376
RC+ C TGP+C+ C G +R
Sbjct: 547 SGRCL-CRPGFTGPRCDQCQRGHCDR 571
>UNIPROTKB|E9PSN2 [details] [associations]
symbol:Ltbp2 "Latent-transforming growth factor
beta-binding protein 2" species:10116 "Rattus norvegicus"
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 Pfam:PF07645
PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:68380 GO:GO:0005615 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186 GO:GO:0031012
PROSITE:PS00010 InterPro:IPR009030 SUPFAM:SSF57184
Gene3D:3.90.290.10 InterPro:IPR017878 Pfam:PF00683 SUPFAM:SSF57581
PROSITE:PS51364 IPI:IPI00559551 Ensembl:ENSRNOT00000046940
ArrayExpress:E9PSN2 Uniprot:E9PSN2
Length = 1814
Score = 152 (58.6 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 66/212 (31%), Positives = 85/212 (40%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGG--ECVPV--CSQ-G-CV 235
C +NECL + C+ + +CV+ + C+C GY + G EC V C Q G C
Sbjct: 878 CTDDNECLRN--PCEGRG-RCVNSVGSYSCLCYPGYTLATLGDTQECQDVDECEQPGVCS 934
Query: 236 RGVCSEPD---KCQCDFGYVGV---NCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQC 289
G CS + C+CD GYV V +C +C C PD RC N C
Sbjct: 935 GGRCSNTEGSYHCECDQGYVMVRRGHCQDINECRHPGTC--PDG-----RCVNSPGSYTC 987
Query: 290 DKCEPLYVGDPRDNGECVPCSEYCN----GHTGLCINASLASLPFSPESGG--TSELAAF 343
CE Y+G +G CV +E H G CIN S S E G T +
Sbjct: 988 LACEEGYIGQ---SGNCVDMNECLTPGICAH-GRCINME-GSFRCSCEPGYELTPDKKGC 1042
Query: 344 LD-EGPTTRARCMH--CGNHTTGPKCEDCVEG 372
D + +RA C C N C C G
Sbjct: 1043 RDVDECASRASCPTGLCLNTEGSFTCSACQSG 1074
Score = 138 (53.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 43/157 (27%), Positives = 66/157 (42%)
Query: 178 NYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CS--QG 233
N C +EC+ + H C P E C++ F C+C G+ +E G C V C+ +
Sbjct: 1163 NGTVCEDVDECVGEEH-CAPHGE-CLNSPGSFFCLCAPGFASAEGGTRCQDVDECATTEP 1220
Query: 234 CVRGVCSEPD---KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCD 290
C+ G C + C C+ G+ S +C + G D + RC N +C
Sbjct: 1221 CLGGHCVNTEGSFNCLCETGFQPAPDSGECVDIDECEDQG-DPVCGDWRCENSPGSYRCV 1279
Query: 291 K-CEPLYVGDPRDNGECVPCSEYCN----GHTGLCIN 322
C+P + P G+C+ E N G+ G C N
Sbjct: 1280 LGCQPGFYVAP--TGDCIDIDECANDTVCGNHGFCDN 1314
>UNIPROTKB|Q29116 [details] [associations]
symbol:TNC "Tenascin" species:9823 "Sus scrofa" [GO:0031012
"extracellular matrix" evidence=IDA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00041
PROSITE:PS50026 PROSITE:PS50853 SMART:SM00060 SMART:SM00181
INTERPRO:IPR002181 GO:GO:0007165 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 GO:GO:0005578 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186 eggNOG:NOG12793
Gene3D:3.90.215.10 Gene3D:4.10.530.10 InterPro:IPR014716
InterPro:IPR014715 Pfam:PF00147 SMART:SM00186 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 InterPro:IPR013111 Pfam:PF07974
Pfam:PF12661 HOVERGEN:HBG008949 OrthoDB:EOG4MSCX9 CTD:3371
KO:K06252 HOGENOM:HOG000234355 EMBL:X61599 PIR:S19694
RefSeq:NP_999395.1 UniGene:Ssc.16209 ProteinModelPortal:Q29116
SMR:Q29116 STRING:Q29116 GeneID:397460 KEGG:ssc:397460
Uniprot:Q29116
Length = 1746
Score = 159 (61.0 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 101/374 (27%), Positives = 134/374 (35%)
Query: 40 CPLRCDQRTDCQD--CLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPH 97
CP C R C D C+ + G G +C S L C S + C GVC G +
Sbjct: 190 CPSNCHLRGQCVDGQCVCNEGFTG--EDC---SQL-ACPSDCNDQGKCVNGVCVCFEG-Y 242
Query: 98 QAPQCPRSCSAYTQCSTCLRHAHC--GWCALQRDTTG---GMGVCTXXXXXXXXXXXXXX 152
C R + CS H C G C Q G +C
Sbjct: 243 SGVDCSRE-TCPVPCSE--EHGRCVDGRCVCQEGFAGEDCNEPLCLHNCHGRGRCVENEC 299
Query: 153 TCDILFYQTYPDQVIEVNNNDSFSWNYVKCPPENECLNDHHTCDP--QSEQCVDLA---- 206
CD F T D + D F C+N CD + E C LA
Sbjct: 300 VCDEGF--TGEDCGELICPKDCFD--------RGRCINGTCYCDEGFEGEDCGRLACPHG 349
Query: 207 --------DGFECVCGRGYNKSEEGGECVPV-CSQGCV-RGVCSEPDKCQCDFGYVGVNC 256
+G +CVC G+ G +C C C RG C + +C+CD G+ G +C
Sbjct: 350 CRGRGRCEEG-QCVCDEGF----AGADCSERRCPSDCHNRGRCLD-GRCECDDGFEGEDC 403
Query: 257 S-IQCQ--CNGHADCA-GPDKLDV------C--LRCHN--HTKGPQC--DKCEPLYVGDP 300
++C C+GH C G D C LRC N H +G +C +CE +
Sbjct: 404 GELRCPGGCSGHGRCVNGQCVCDEGRTGEDCSQLRCPNDCHGRG-RCVQGRCECEHGFQG 462
Query: 301 RDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLD-EGPTT-RARCMH-- 356
D E + C C+ H G C+N + G T E L G + R RC+
Sbjct: 463 YDCSE-MSCPHDCHQH-GRCVNGMCVC-----DDGYTGEDCRELRCPGDCSQRGRCVDGR 515
Query: 357 --CGNHTTGPKCED 368
C + GP C D
Sbjct: 516 CVCEHGFAGPDCAD 529
Score = 129 (50.5 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 46/135 (34%), Positives = 60/135 (44%)
Query: 193 HTCDPQSEQCVDLADGFECVCGRGYNKSEEGGE--CVPVCSQGCVRGVCSEPDKCQCDFG 250
H C Q +CV+ G CVC GY E+ E C CSQ RG C + +C C+ G
Sbjct: 472 HDCH-QHGRCVN---GM-CVCDDGYT-GEDCRELRCPGDCSQ---RGRCVD-GRCVCEHG 521
Query: 251 YVGVNCS-IQC--QCNGHADCAGPDKLDVCLRCHNHTKGPQCD--KCEPLYVGDPRDNGE 305
+ G +C+ + C C+G C C+ CH G C +C P GD G
Sbjct: 522 FAGPDCADLACPSDCHGRGRCVNGQ----CV-CHEGFTGKDCGQRRC-P---GDCHGQGR 572
Query: 306 CVPCSEYCN-GHTGL 319
CV C+ G TGL
Sbjct: 573 CVDGQCVCHEGFTGL 587
Score = 52 (23.4 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 21/80 (26%), Positives = 30/80 (37%)
Query: 39 SCPLRCDQRTDCQD--CLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGP 96
+CP C R C++ C+ G G +C S C S + C G C G
Sbjct: 345 ACPHGCRGRGRCEEGQCVCDEGFAGA--DC--SE--RRCPSDCHNRGRCLDGRCECDDGF 398
Query: 97 HQAP----QCPRSCSAYTQC 112
+CP CS + +C
Sbjct: 399 EGEDCGELRCPGGCSGHGRC 418
Score = 46 (21.3 bits), Expect = 0.00036, Sum P(3) = 0.00036
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 95 GPH-QAPQCPRSCSAYTQC 112
GP+ P+CP +C QC
Sbjct: 182 GPNCSEPECPSNCHLRGQC 200
Score = 40 (19.1 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 31 NIKLKTGSSCPLRCDQRTDCQDCLTSS 57
NIKL GS C + + + +D S
Sbjct: 55 NIKLPVGSQCSVDLESASGDKDLAAPS 81
>RGD|620998 [details] [associations]
symbol:Nell1 "NEL-like 1 (chicken)" species:10116 "Rattus
norvegicus" [GO:0005080 "protein kinase C binding" evidence=IDA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005615
"extracellular space" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0006917 "induction of apoptosis" evidence=IMP] [GO:0008201
"heparin binding" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IEA;ISO;ISS] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030501 "positive regulation of
bone mineralization" evidence=IEA;ISO;ISS] [GO:0033689 "negative
regulation of osteoblast proliferation" evidence=IEA;ISO;ISS]
[GO:0042802 "identical protein binding" evidence=IDA] [GO:0045667
"regulation of osteoblast differentiation" evidence=IMP]
[GO:0045669 "positive regulation of osteoblast differentiation"
evidence=IEA;ISO;ISS] [GO:0045778 "positive regulation of
ossification" evidence=IMP] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA;ISO;ISS] [GO:0070207 "protein
homotrimerization" evidence=IDA] [GO:2000599 "negative regulation
of cyclin catabolic process" evidence=IEA;ISO;ISS]
InterPro:IPR000742 InterPro:IPR001007 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00093 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS01208 PROSITE:PS50026 PROSITE:PS50184 SMART:SM00179
SMART:SM00181 SMART:SM00214 InterPro:IPR000152 RGD:620998
GO:GO:0005635 GO:GO:0048471 GO:GO:0005080 GO:GO:0005615
GO:GO:0030154 GO:GO:0006917 GO:GO:0008201 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0042802
GO:GO:0030501 GO:GO:0045669 PROSITE:PS01186 InterPro:IPR001791
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 GO:GO:0070207
GO:GO:0010468 GO:GO:2000599 GO:GO:0033689 Pfam:PF02210 Pfam:PF12661
SMART:SM00210 InterPro:IPR024731 Pfam:PF12947 CTD:4745
eggNOG:NOG253557 HOGENOM:HOG000217920 HOVERGEN:HBG004805
OrthoDB:EOG4M0F11 EMBL:U48246 IPI:IPI00210166 PIR:T10756
RefSeq:NP_112331.1 UniGene:Rn.10695 ProteinModelPortal:Q62919
STRING:Q62919 PhosphoSite:Q62919 PRIDE:Q62919 GeneID:81733
KEGG:rno:81733 UCSC:RGD:620998 NextBio:615404 ArrayExpress:Q62919
Genevestigator:Q62919 GermOnline:ENSRNOG00000015675 Uniprot:Q62919
Length = 810
Score = 148 (57.2 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 52/183 (28%), Positives = 72/183 (39%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGC-VRGVCS 240
C ++C + H CD ++ C + G C C GY + G C C +GC G C
Sbjct: 474 CTEHDDCGSGQHNCD-KNAICTNTVQGHSCTCQPGYVGN--GTICKAFCEEGCRYGGTCV 530
Query: 241 EPDKCQCDFGYVGVNCSIQC-QC-NGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVG 298
P+KC C G+ G +C +C G +C RC N C+ C +
Sbjct: 531 APNKCVCPSGFTGSHCEKDIDECAEGFVECHNYS------RCVNLPGWYHCE-CRSGFHD 583
Query: 299 DPRDN--GE-CVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCM 355
D + GE C+ E C T C N S A + + GG L GP+ C
Sbjct: 584 DGTYSLSGESCIDIDE-CALRTHTCWNDS-ACINLA---GGFDCLCP---SGPSCSGDCP 635
Query: 356 HCG 358
H G
Sbjct: 636 HEG 638
>UNIPROTKB|Q62919 [details] [associations]
symbol:Nell1 "Protein kinase C-binding protein NELL1"
species:10116 "Rattus norvegicus" [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001007
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00093 Pfam:PF07645
PROSITE:PS01187 PROSITE:PS01208 PROSITE:PS50026 PROSITE:PS50184
SMART:SM00179 SMART:SM00181 SMART:SM00214 InterPro:IPR000152
RGD:620998 GO:GO:0005635 GO:GO:0048471 GO:GO:0005080 GO:GO:0005615
GO:GO:0030154 GO:GO:0006917 GO:GO:0008201 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0042802
GO:GO:0030501 GO:GO:0045669 PROSITE:PS01186 InterPro:IPR001791
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 GO:GO:0070207
GO:GO:0010468 GO:GO:2000599 GO:GO:0033689 Pfam:PF02210 Pfam:PF12661
SMART:SM00210 InterPro:IPR024731 Pfam:PF12947 CTD:4745
eggNOG:NOG253557 HOGENOM:HOG000217920 HOVERGEN:HBG004805
OrthoDB:EOG4M0F11 EMBL:U48246 IPI:IPI00210166 PIR:T10756
RefSeq:NP_112331.1 UniGene:Rn.10695 ProteinModelPortal:Q62919
STRING:Q62919 PhosphoSite:Q62919 PRIDE:Q62919 GeneID:81733
KEGG:rno:81733 UCSC:RGD:620998 NextBio:615404 ArrayExpress:Q62919
Genevestigator:Q62919 GermOnline:ENSRNOG00000015675 Uniprot:Q62919
Length = 810
Score = 148 (57.2 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 52/183 (28%), Positives = 72/183 (39%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGC-VRGVCS 240
C ++C + H CD ++ C + G C C GY + G C C +GC G C
Sbjct: 474 CTEHDDCGSGQHNCD-KNAICTNTVQGHSCTCQPGYVGN--GTICKAFCEEGCRYGGTCV 530
Query: 241 EPDKCQCDFGYVGVNCSIQC-QC-NGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVG 298
P+KC C G+ G +C +C G +C RC N C+ C +
Sbjct: 531 APNKCVCPSGFTGSHCEKDIDECAEGFVECHNYS------RCVNLPGWYHCE-CRSGFHD 583
Query: 299 DPRDN--GE-CVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCM 355
D + GE C+ E C T C N S A + + GG L GP+ C
Sbjct: 584 DGTYSLSGESCIDIDE-CALRTHTCWNDS-ACINLA---GGFDCLCP---SGPSCSGDCP 635
Query: 356 HCG 358
H G
Sbjct: 636 HEG 638
>UNIPROTKB|Q8WTR8 [details] [associations]
symbol:NTN5 "Netrin-5" species:9606 "Homo sapiens"
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005576 PROSITE:PS00022 PROSITE:PS01186
EMBL:CH471177 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 HSSP:P02468 SMART:SM00643
HOGENOM:HOG000286017 EMBL:BC018654 EMBL:BC018697 EMBL:BC021210
EMBL:BC033207 IPI:IPI00102812 IPI:IPI00645833 RefSeq:NP_665806.1
UniGene:Hs.326217 ProteinModelPortal:Q8WTR8 SMR:Q8WTR8
DMDM:74730628 PaxDb:Q8WTR8 PRIDE:Q8WTR8 Ensembl:ENST00000270235
GeneID:126147 KEGG:hsa:126147 UCSC:uc002pkb.3 UCSC:uc002pkc.3
CTD:126147 GeneCards:GC19M049164 HGNC:HGNC:25208 neXtProt:NX_Q8WTR8
PharmGKB:PA164724232 eggNOG:NOG327968 HOVERGEN:HBG096704
InParanoid:Q8WTR8 OMA:GGPFLLT OrthoDB:EOG402WS1 GenomeRNAi:126147
NextBio:81704 Bgee:Q8WTR8 Genevestigator:Q8WTR8 Uniprot:Q8WTR8
Length = 489
Score = 145 (56.1 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 43/122 (35%), Positives = 51/122 (41%)
Query: 259 QCQCNGHAD-CAGPDKLDVCLRCHNHTKGPQCDKCEPLY------VGDPRDNGECVPCSE 311
+CQC+GHA CA + C C +HT GP C+ C P + PR C+PCS
Sbjct: 156 RCQCHGHAARCAARARPPRC-HCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCS- 213
Query: 312 YCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCV 370
CN H C N+ L L SGG E RC H HT G C C
Sbjct: 214 -CNQHARRCRFNSELFRLS-GGRSGGVCE-------------RCRH---HTAGRHCHYCQ 255
Query: 371 EG 372
G
Sbjct: 256 PG 257
>UNIPROTKB|P98160 [details] [associations]
symbol:HSPG2 "Basement membrane-specific heparan sulfate
proteoglycan core protein" species:9606 "Homo sapiens" [GO:0001525
"angiogenesis" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0002062 "chondrocyte differentiation" evidence=IEA] [GO:0005605
"basal lamina" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0048738 "cardiac muscle tissue development" evidence=IEA]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0070062 "extracellular vesicular exosome" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005796 "Golgi
lumen" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0006024 "glycosaminoglycan biosynthetic process" evidence=TAS]
[GO:0006027 "glycosaminoglycan catabolic process" evidence=TAS]
[GO:0006629 "lipid metabolic process" evidence=TAS] [GO:0030203
"glycosaminoglycan metabolic process" evidence=TAS] [GO:0030204
"chondroitin sulfate metabolic process" evidence=TAS] [GO:0042157
"lipoprotein metabolic process" evidence=TAS] [GO:0043202
"lysosomal lumen" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0031012 "extracellular matrix" evidence=ISS;IDA]
Reactome:REACT_111217 InterPro:IPR000742 InterPro:IPR002172
InterPro:IPR007110 Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026
PROSITE:PS50068 PROSITE:PS50835 SMART:SM00181 SMART:SM00192
GO:GO:0005886 Reactome:REACT_116125 GO:GO:0005615 GO:GO:0008104
GO:GO:0007420 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
GO:GO:0005975 GO:GO:0070062 InterPro:IPR003598 SMART:SM00408
DrugBank:DB00102 GO:GO:0006629 GO:GO:0030198 GO:GO:0001525
GO:GO:0042157 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0048738
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 PROSITE:PS01186 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209 GO:GO:0043202
InterPro:IPR002049 InterPro:IPR001791 InterPro:IPR000082
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282 SMART:SM00200
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
GO:GO:0005796 GO:GO:0030204 GO:GO:0006024 GO:GO:0006027
InterPro:IPR013098 Pfam:PF07679 GO:GO:0048704 GO:GO:0002062
GO:GO:0001958 Pfam:PF02210 GO:GO:0060351 Pfam:PF12661 EMBL:AL590556
DrugBank:DB00039 InterPro:IPR018031 InterPro:IPR000034 Pfam:PF00052
SMART:SM00281 PROSITE:PS51115 EMBL:AL590103 EMBL:M85289 EMBL:X62515
EMBL:L22078 EMBL:AL445795 EMBL:S76436 EMBL:M64283 IPI:IPI00024284
PIR:A38096 RefSeq:NP_005520.4 UniGene:Hs.562227 PDB:3SH4 PDB:3SH5
PDBsum:3SH4 PDBsum:3SH5 ProteinModelPortal:P98160 SMR:P98160
IntAct:P98160 MINT:MINT-123304 STRING:P98160 PhosphoSite:P98160
DMDM:218512120 DOSAC-COBS-2DPAGE:P98160 PaxDb:P98160 PRIDE:P98160
Ensembl:ENST00000374695 GeneID:3339 KEGG:hsa:3339 UCSC:uc001bfj.3
CTD:3339 GeneCards:GC01M022148 H-InvDB:HIX0023554
H-InvDB:HIX0023598 HGNC:HGNC:5273 HPA:CAB009820 HPA:CAB020718
HPA:HPA018892 MIM:142461 MIM:224410 MIM:255800 neXtProt:NX_P98160
Orphanet:1865 Orphanet:800 PharmGKB:PA29537 eggNOG:NOG258321
HOGENOM:HOG000049276 HOVERGEN:HBG008174 InParanoid:P98160 KO:K06255
OMA:GVTQQCA OrthoDB:EOG44QT00 ChiTaRS:HSPG2 GenomeRNAi:3339
NextBio:13216 ArrayExpress:P98160 Bgee:P98160 CleanEx:HS_HSPG2
Genevestigator:P98160 GermOnline:ENSG00000142798 Uniprot:P98160
Length = 4391
Score = 135 (52.6 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 30/78 (38%), Positives = 43/78 (55%)
Query: 245 CQ-CDFGYV----GV---NCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLY 296
CQ CD GY G+ C +C C+GH++ P+ C C +HT+GP+C++C+P Y
Sbjct: 1137 CQDCDTGYTRTPSGLYLGTCE-RCSCHGHSEACEPET-GACQGCQHHTEGPRCEQCQPGY 1194
Query: 297 VGD-----PRDNGECVPC 309
GD P+D C PC
Sbjct: 1195 YGDAQRGTPQDCQLC-PC 1211
Score = 124 (48.7 bits), Expect = 5.0e-07, Sum P(4) = 5.0e-07
Identities = 26/61 (42%), Positives = 33/61 (54%)
Query: 251 YVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNG--ECVP 308
Y+G CS C CNGHA P CL C ++T+GPQC+KC+ + GD C P
Sbjct: 757 YLGT-CS-GCNCNGHASSCDP-VYGHCLNCQHNTEGPQCNKCKAGFFGDAMKATATSCRP 813
Query: 309 C 309
C
Sbjct: 814 C 814
Score = 120 (47.3 bits), Expect = 0.00087, Sum P(3) = 0.00086
Identities = 27/86 (31%), Positives = 42/86 (48%)
Query: 230 CSQGCVRGVCSE--PDKCQCDFG-YVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKG 286
C G + C + P + G Y+G +C + C+CNGH+D P+ C +C ++ G
Sbjct: 1532 CPPGYIGLSCQDCAPGYTRTGSGLYLG-HCEL-CECNGHSDLCHPET-GACSQCQHNAAG 1588
Query: 287 PQCDKCEPLYVGDPRDNG--ECVPCS 310
C+ C P Y GD +C PC+
Sbjct: 1589 EFCELCAPGYYGDATAGTPEDCQPCA 1614
Score = 72 (30.4 bits), Expect = 5.0e-07, Sum P(4) = 5.0e-07
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 348 PTTRARCMHCGNHTTGPKCEDCVEG 372
P T A C C +HT GP+CE C G
Sbjct: 1170 PETGA-CQGCQHHTEGPRCEQCQPG 1193
Score = 57 (25.1 bits), Expect = 5.0e-07, Sum P(4) = 5.0e-07
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 181 KCPPENECLNDHHTCDPQSEQCVDLADGFECV 212
+C N C+ CD +S+ C D +D F C+
Sbjct: 374 RCVSTNMCIPASFHCDEESD-CPDRSDEFGCM 404
Score = 56 (24.8 bits), Expect = 1.7e-05, Sum P(4) = 1.7e-05
Identities = 19/57 (33%), Positives = 21/57 (36%)
Query: 319 LCINASLASLPFSPESGGTSELAAFLDE-G--PTTRARCMHCGNHTTGPKCEDCVEG 372
L I AS A P G S A +E G P C GP C+DC G
Sbjct: 1087 LLIRASYAQQPAESRVSGISMDVAVPEETGQDPALEVEQCSCPPGYRGPSCQDCDTG 1143
Score = 54 (24.1 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFEC 211
C NEC+ + CD + + C D++D C
Sbjct: 206 CHSYNECVALEYRCDRRPD-CRDMSDELNC 234
Score = 47 (21.6 bits), Expect = 5.0e-07, Sum P(4) = 5.0e-07
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 43 RCDQRTDCQD 52
RCD+R DC+D
Sbjct: 218 RCDRRPDCRD 227
Score = 39 (18.8 bits), Expect = 6.6e-05, Sum P(3) = 6.6e-05
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 44 CDQRTDCQDCLTSSGGEG-GWHECRWSSMLNECISPSY 80
C+ RTD +C T E G + R S N CI S+
Sbjct: 350 CEDRTDEANCPTKRPEEVCGPTQFRCVST-NMCIPASF 386
Score = 38 (18.4 bits), Expect = 8.3e-05, Sum P(3) = 8.3e-05
Identities = 5/9 (55%), Positives = 7/9 (77%)
Query: 44 CDQRTDCQD 52
CD+ +DC D
Sbjct: 388 CDEESDCPD 396
Score = 37 (18.1 bits), Expect = 4.6e-06, Sum P(4) = 4.6e-06
Identities = 6/10 (60%), Positives = 7/10 (70%)
Query: 43 RCDQRTDCQD 52
RCD DC+D
Sbjct: 343 RCDGDFDCED 352
>UNIPROTKB|F1SN67 [details] [associations]
symbol:FBN1 "Fibrillin-1" species:9823 "Sus scrofa"
[GO:0007507 "heart development" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0001527 "microfibril" evidence=IEA] [GO:0001501
"skeletal system development" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR011398 InterPro:IPR018097
Pfam:PF07645 PIRSF:PIRSF036312 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005615
GO:GO:0007507 GO:GO:0005509 InterPro:IPR013032 GO:GO:0001501
PROSITE:PS01186 PROSITE:PS00010 GO:GO:0005604 GO:GO:0001527
InterPro:IPR026823 Pfam:PF12662 GO:GO:0005201
GeneTree:ENSGT00700000104076 Gene3D:3.90.290.10 InterPro:IPR017878
PANTHER:PTHR24039:SF0 Pfam:PF00683 SUPFAM:SSF57581 PROSITE:PS51364
OMA:DATGRIC EMBL:CU075371 EMBL:CU076048 Ensembl:ENSSSCT00000005143
ArrayExpress:F1SN67 Uniprot:F1SN67
Length = 2336
Score = 152 (58.6 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 48/162 (29%), Positives = 73/162 (45%)
Query: 180 VKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG---C 234
+KC +EC N H C Q C + + C+C GY + +G C + CS+ C
Sbjct: 1359 IKCTDLDECSNGTHMCS-QHADCKNTMGSYRCLCKEGY--TGDGFTCTDLDECSENLNLC 1415
Query: 235 VRGVC-SEPD--KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCL--RCHNHTKGPQC 289
G C + P +C+CD G+V + C +C+ P+ +C+ CHN +C
Sbjct: 1416 GNGQCLNAPGGYRCECDMGFVP--SPDRKACEDIDECSLPN---ICVFGTCHNLPGLFRC 1470
Query: 290 DKCEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFS 331
+ CE Y D R G C +E C T CI+ + + P S
Sbjct: 1471 E-CEIGYELD-RSGGNCTDVNE-CLDPT-TCISGNCVNTPGS 1508
Score = 148 (57.2 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 60/213 (28%), Positives = 88/213 (41%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG---CVR 236
C +EC ++ + CD QC ++ + C+C G+ SE+ CV V C C+
Sbjct: 1236 CTDIDECEDNPNICD--GGQCTNIPGEYRCLCYDGFMASEDMKTCVDVNECDLNPNICLS 1293
Query: 237 GVCSEPDK---CQCDFGYVG----VNCSI--QCQCNGHADCAGPDKLDVCLRCHNHTKGP 287
G C C CD GY G C+ +C+ H +C D+ VC +T G
Sbjct: 1294 GTCENTKGSFICHCDMGYSGKKGKTGCTDINECEIGAH-NC---DRHAVC----TNTAGS 1345
Query: 288 -QCDKCEPLYVGDP---RDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSE--LA 341
+C C P ++GD D EC + C+ H C N ++ S + G T +
Sbjct: 1346 FKCS-CSPGWIGDGIKCTDLDECSNGTHMCSQHAD-CKN-TMGSYRCLCKEGYTGDGFTC 1402
Query: 342 AFLDEGPTTRARCMH--CGNHTTGPKCEDCVEG 372
LDE C + C N G +CE C G
Sbjct: 1403 TDLDECSENLNLCGNGQCLNAPGGYRCE-CDMG 1434
>UNIPROTKB|O00634 [details] [associations]
symbol:NTN3 "Netrin-3" species:9606 "Homo sapiens"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0042692 "muscle cell
differentiation" evidence=TAS] [GO:0051149 "positive regulation of
muscle cell differentiation" evidence=TAS] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005794 Reactome:REACT_111045 GO:GO:0007411
GO:GO:0005578 PROSITE:PS00022 GO:GO:0042692 GO:GO:0051149
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464
eggNOG:NOG244580 HOGENOM:HOG000286017 OrthoDB:EOG4VHK67 EMBL:U86759
EMBL:U86758 IPI:IPI00006193 RefSeq:NP_006172.1 UniGene:Hs.158336
ProteinModelPortal:O00634 SMR:O00634 STRING:O00634 PaxDb:O00634
PRIDE:O00634 Ensembl:ENST00000293973 GeneID:4917 KEGG:hsa:4917
UCSC:uc002cqj.3 CTD:4917 GeneCards:GC16P002521 HGNC:HGNC:8030
MIM:602349 neXtProt:NX_O00634 PharmGKB:PA164724231
InParanoid:O00634 KO:K06844 OMA:TASPLCW PhylomeDB:O00634
GenomeRNAi:4917 NextBio:18935 Bgee:O00634 CleanEx:HS_NTN3
Genevestigator:O00634 GermOnline:ENSG00000162068 Uniprot:O00634
Length = 580
Score = 145 (56.1 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 40/134 (29%), Positives = 58/134 (43%)
Query: 249 FGYVGVNCSI--QCQCNGHAD-CAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDP----- 300
+ Y + + +C+CNGHA C + + C + T+GP C +C+P Y P
Sbjct: 242 YSYAATDLQVGGRCKCNGHASRCLLDTQGHLICDCRHGTEGPDCGRCKPFYCDRPWQRAT 301
Query: 301 -RDNGECVPCSEYCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCG 358
R++ C+ CS CNGH C N L L SGG C++C
Sbjct: 302 ARESHACLACS--CNGHARRCRFNMELYRLS-GRRSGGV----------------CLNCR 342
Query: 359 NHTTGPKCEDCVEG 372
++T G C C EG
Sbjct: 343 HNTAGRHCHYCREG 356
>UNIPROTKB|F1N444 [details] [associations]
symbol:LTBP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 GO:GO:0005578 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186 PROSITE:PS00010
GeneTree:ENSGT00700000104076 Gene3D:3.90.290.10 InterPro:IPR017878
Pfam:PF00683 SUPFAM:SSF57581 PROSITE:PS51364 OMA:TQLGRCF
EMBL:DAAA02030450 EMBL:DAAA02030451 EMBL:DAAA02030452
EMBL:DAAA02030453 EMBL:DAAA02030454 EMBL:DAAA02030455
EMBL:DAAA02030456 EMBL:DAAA02030457 EMBL:DAAA02030458
EMBL:DAAA02030459 EMBL:DAAA02030460 EMBL:DAAA02030461
EMBL:DAAA02030462 EMBL:DAAA02030463 EMBL:DAAA02030464
EMBL:DAAA02030465 EMBL:DAAA02030466 EMBL:DAAA02030467
EMBL:DAAA02030468 EMBL:DAAA02030469 EMBL:DAAA02030470
IPI:IPI00906944 Ensembl:ENSBTAT00000026435 Uniprot:F1N444
Length = 1709
Score = 146 (56.5 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 50/172 (29%), Positives = 70/172 (40%)
Query: 173 DSFSWNYV--KCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVC 230
D + +N KC +EC D H C +C + F C+C G+ SEEG C+ V
Sbjct: 891 DGYKFNEQQRKCVDIDECAQDQHLCS--QGRCENTEGSFLCICPAGFMASEEGTNCIDV- 947
Query: 231 SQGCVR-GVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGP-DKLDVCLRCHNHTKGPQ 288
C+R VC E C G C C H G + +D CL + P
Sbjct: 948 -DECLRPDVCGE-GHCVNTMG--AFRCEY-CDSGYHMTPGGQCEDVDECL---TPSTCPD 999
Query: 289 CDKCEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSEL 340
++C V P + +CVPC+E G G C++ P +G S L
Sbjct: 1000 -EQC----VNSP-GSYQCVPCTEGFRGWNGQCLDVDECLEPKICTNGTCSNL 1045
Score = 129 (50.5 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 48/163 (29%), Positives = 69/163 (42%)
Query: 177 WNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG- 233
WN +C +ECL + C + C +L + C C +GY+ + + C + C QG
Sbjct: 1021 WNG-QCLDVDECL-EPKICT--NGTCSNLEGSYMCSCHKGYSPTPDHKHCEDIDECQQGT 1076
Query: 234 -CVRGVCSEPD---KCQCDFGYVGVNCSIQCQ----CNGHADCAGPDKLDVCLRCHNHTK 285
C+ G C D +C C GY QC+ C H C+ +C N T+
Sbjct: 1077 MCMNGQCKNTDGSFRCTCGQGYQLSAAKDQCEDIDECQHHHLCSNG-------QCRN-TE 1128
Query: 286 GP-QCDKCEPLY----VGDP-RDNGECVPCSEYCNGHTGLCIN 322
G +C C+ Y +GD D EC+ C G G CIN
Sbjct: 1129 GSFRC-VCDHGYRASALGDHCEDINECLEDKSVCQG--GDCIN 1168
Score = 52 (23.4 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 15/55 (27%), Positives = 23/55 (41%)
Query: 13 QVAYTLEPRTVKTDANRTNIKLKTGSSCPLRCDQRTDCQDCLTSSGGEGGWHECR 67
QV + P KT R + GS C + +DC + G G+H+C+
Sbjct: 531 QVIPHVYPVAAKTQLGRC-FQETIGSQCGKALPGLSKQEDCCGTVGTSWGFHKCQ 584
Score = 47 (21.6 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 13/39 (33%), Positives = 17/39 (43%)
Query: 85 CAGGVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHCGW 123
C G V G G H+ +CP+ S + C L GW
Sbjct: 570 CCGTV-GTSWGFHKCQKCPKKPSYHGSCF--LLWCTVGW 605
>UNIPROTKB|F1MYW1 [details] [associations]
symbol:LOC100849141 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0051636 "Gram-negative bacterial cell surface
binding" evidence=IEA] [GO:0042742 "defense response to bacterium"
evidence=IEA] [GO:0030169 "low-density lipoprotein particle
binding" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005044
"scavenger receptor activity" evidence=IEA] [GO:0005041
"low-density lipoprotein receptor activity" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0005540 "hyaluronic
acid binding" evidence=IEA] InterPro:IPR000538 InterPro:IPR000742
Pfam:PF00193 PROSITE:PS01241 PROSITE:PS50026 PROSITE:PS50963
SMART:SM00181 SMART:SM00445 Pfam:PF02469 InterPro:IPR000782
GO:GO:0005737 GO:GO:0005887 GO:GO:0042742 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186 GO:GO:0030169
Gene3D:2.30.180.10 SMART:SM00554 SUPFAM:SSF82153 PROSITE:PS50213
InterPro:IPR009030 SUPFAM:SSF57184 GO:GO:0051636 GO:GO:0005044
GO:GO:0005540 GO:GO:0005041 InterPro:IPR024731 Pfam:PF12947
Gene3D:2.40.155.10 InterPro:IPR023413 GeneTree:ENSGT00690000101914
OMA:IPKCCKG EMBL:DAAA02013716 EMBL:DAAA02013715 IPI:IPI01000876
Ensembl:ENSBTAT00000007896 Uniprot:F1MYW1
Length = 2558
Score = 111 (44.1 bits), Expect = 7.1e-07, Sum P(3) = 7.1e-07
Identities = 49/164 (29%), Positives = 60/164 (36%)
Query: 195 CDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQGCVRGVCSEPDKCQCDFGYV 252
C P + C C Y +G C V C Q G C++ KC V
Sbjct: 2059 CTPPCSAHATCKNNNTCECNLNYEG--DGITCTVVDFCKQN--NGGCAKVAKCSQKGTKV 2114
Query: 253 GVNCSIQCQCNGHADCAGPDKLDVCL--RCHNHTK----GPQCDKCE--PLYVGDPRD-N 303
+C Q +GH+ C D L RCH H GP KCE YVGD D
Sbjct: 2115 SCSCQKGYQGDGHS-CTAIDPCADGLNGRCHEHATCKMTGPGKHKCECKSHYVGDGLDCE 2173
Query: 304 GECVPCSEYCNGHTGLC-INASLASLPFSPESGGTSELAAFLDE 346
E +P C G C NA A L F + G L + L +
Sbjct: 2174 PEQLPIDR-CLQDNGQCHANADCADLHFQDTTVGVFHLRSPLGQ 2216
Score = 98 (39.6 bits), Expect = 7.1e-07, Sum P(3) = 7.1e-07
Identities = 39/154 (25%), Positives = 50/154 (32%)
Query: 66 CRWSSMLNECI-SPSYEALYCAGGVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHCGWC 124
C +S C+ P YE G C + + P P CS Y +C R H C
Sbjct: 851 CEYSDGTASCVCKPGYEG---DGSFC-VEMDPCSG-SIPGGCSRYAECIRTGRGTHT--C 903
Query: 125 ALQRDTTGGMGVCTXXXXXXXXXXXXXXTCDILFYQTYPDQVIEVNNNDSFSWNYVKCPP 184
+ TG C+ Y P Q E F N + C P
Sbjct: 904 VCREGWTGDGRDCSEINPCLLPSAGSCHHNATCLY-VGPGQN-ECECKKGFQGNGIDCEP 961
Query: 185 ENECLNDHHTCDPQSEQCVDLADG-FECVCGRGY 217
CL C P + C + G + CVC GY
Sbjct: 962 ITSCLEQTEKCHPLAT-CQLTSSGIWSCVCQEGY 994
Score = 88 (36.0 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 40/158 (25%), Positives = 60/158 (37%)
Query: 223 GGECVPVCSQGCVRGVCSEP----DKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCL 278
GG P C+ RG+C +P +CQC+ G+ G C + DC P
Sbjct: 1972 GGPDTP-CNN---RGICLDPYSPSRQCQCNSGFNGTTCELCWPGRFGPDCQ-PCGCSDHG 2026
Query: 279 RCHNHTKGP-QCDKCEPLYVGDPRDNGECV-P-CSEYCNGHTGLCINASLASLPFSPESG 335
+C + G +C CE + G D + P C+ C+ H C N + + E
Sbjct: 2027 QCDDGITGSGECI-CETGWTGRFCDTQTALAPVCTPPCSAHA-TCKNNNTCECNLNYEGD 2084
Query: 336 G-TSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCVEG 372
G T + F + A+ C T C C +G
Sbjct: 2085 GITCTVVDFCKQNNGGCAKVAKCSQKGTKVSCS-CQKG 2121
Score = 40 (19.1 bits), Expect = 7.1e-07, Sum P(3) = 7.1e-07
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 43 RCDQ------RTDCQDCLTSSG 58
RCD+ RT+CQ C + G
Sbjct: 38 RCDKKSLLTIRTECQSCSVNFG 59
>UNIPROTKB|P07942 [details] [associations]
symbol:LAMB1 "Laminin subunit beta-1" species:9606 "Homo
sapiens" [GO:0005178 "integrin binding" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IEA] [GO:0007566
"embryo implantation" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0043257
"laminin-8 complex" evidence=IDA;TAS] [GO:0005607 "laminin-2
complex" evidence=IDA;TAS] [GO:0031175 "neuron projection
development" evidence=IDA] [GO:0042476 "odontogenesis"
evidence=IDA] [GO:0005604 "basement membrane" evidence=IDA;TAS]
[GO:0005198 "structural molecule activity" evidence=NAS]
[GO:0005606 "laminin-1 complex" evidence=IDA;TAS;IPI] [GO:0030335
"positive regulation of cell migration" evidence=IDA] [GO:0043259
"laminin-10 complex" evidence=IDA] [GO:0005615 "extracellular
space" evidence=IDA] [GO:0070062 "extracellular vesicular exosome"
evidence=IDA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IDA] [GO:0007155 "cell adhesion"
evidence=TAS] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=TAS] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=IDA]
[GO:0031012 "extracellular matrix" evidence=ISS] GO:GO:0048471
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111045 Reactome:REACT_111102 GO:GO:0007411
GO:GO:0005615 GO:GO:0016477 GO:GO:0070062 PROSITE:PS00022
PROSITE:PS01186 GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0034446 Pathway_Interaction_DB:amb2_neutrophils_pathway
GO:GO:0042476 DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031
EMBL:CH236947 GO:GO:0050679 GO:GO:0007566 InterPro:IPR009053
SUPFAM:SSF46579 DrugBank:DB00015 GO:GO:0005201 GO:GO:0043208
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GO:GO:0005606 GO:GO:0043259 eggNOG:NOG241384 HOGENOM:HOG000007552
GO:GO:0005607 GO:GO:0043257 KO:K05636 InterPro:IPR013015
PROSITE:PS51116 EMBL:M61951 EMBL:M58147 EMBL:M61917 EMBL:M61918
EMBL:M61921 EMBL:M61922 EMBL:M61923 EMBL:M61924 EMBL:M61925
EMBL:M61926 EMBL:M61927 EMBL:M61928 EMBL:M61929 EMBL:M61930
EMBL:M61931 EMBL:M61932 EMBL:M61933 EMBL:M61934 EMBL:M61935
EMBL:M61936 EMBL:M61938 EMBL:M61939 EMBL:M61940 EMBL:M61941
EMBL:M61942 EMBL:M61943 EMBL:M61944 EMBL:M61945 EMBL:M61946
EMBL:M61947 EMBL:M61948 EMBL:M61949 EMBL:M61950 EMBL:M55370
EMBL:M55378 EMBL:M55365 EMBL:M55371 EMBL:M55372 EMBL:M55373
EMBL:M55374 EMBL:M55375 EMBL:M55376 EMBL:M55344 EMBL:M55345
EMBL:M55346 EMBL:M55347 EMBL:M55348 EMBL:M55349 EMBL:M55350
EMBL:M55351 EMBL:M55352 EMBL:M55353 EMBL:M55355 EMBL:M55356
EMBL:M55357 EMBL:M55358 EMBL:M55359 EMBL:M55360 EMBL:M55361
EMBL:M55362 EMBL:M55363 EMBL:M55364 EMBL:M55366 EMBL:M55367
EMBL:M55368 EMBL:M55369 EMBL:M61916 EMBL:BC113455 EMBL:M20206
IPI:IPI00013976 PIR:S13547 RefSeq:NP_002282.2 UniGene:Hs.650585
ProteinModelPortal:P07942 SMR:P07942 IntAct:P07942
MINT:MINT-2860329 STRING:P07942 PhosphoSite:P07942 DMDM:126366
PaxDb:P07942 PRIDE:P07942 Ensembl:ENST00000222399 GeneID:3912
KEGG:hsa:3912 UCSC:uc003vev.2 CTD:3912 GeneCards:GC07M107564
H-InvDB:HIX0025323 HGNC:HGNC:6486 HPA:CAB004256 HPA:HPA004056
HPA:HPA004132 MIM:150240 neXtProt:NX_P07942 PharmGKB:PA30275
HOVERGEN:HBG052301 PhylomeDB:P07942 ChiTaRS:LAMB1 GenomeRNAi:3912
NextBio:15367 ArrayExpress:P07942 Bgee:P07942 CleanEx:HS_LAMB1
Genevestigator:P07942 GermOnline:ENSG00000091136 Uniprot:P07942
Length = 1786
Score = 150 (57.9 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 65/215 (30%), Positives = 83/215 (38%)
Query: 181 KCPPENECLNDHHTCDPQSEQCVDLAD--GFECV-CGRGYNKSEEGGECVPV-CS-QGCV 235
+C P+ + CDP QC + G C C G G C P C QG V
Sbjct: 774 ECDPQGSLSS---VCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPSG-CKPCECHLQGSV 829
Query: 236 RGVCSE-PDKCQCDFGYVGVNC-----------SIQ-CQCNGHADCAGPDKLDVCLRCHN 282
C+ +C C G C S Q CQCNGHAD P + CL C +
Sbjct: 830 NAFCNPVTGQCHCFQGVYARQCDRCLPGHWGFPSCQPCQCNGHADDCDPVTGE-CLNCQD 888
Query: 283 HTKGPQCDKCEPLYVGDPR-DNGE-CVPCSEYCNGHTGLCINASLASLPFSPESGGTSEL 340
+T G C++C Y GDP +G+ C PC +G S P T +L
Sbjct: 889 YTMGHNCERCLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQFARSCYQDPV------TLQL 942
Query: 341 AAFLDEGPTTRARCMHC-----GNHT-TGPKCEDC 369
A D G +RC C GN + G C+ C
Sbjct: 943 ACVCDPG-YIGSRCDDCASGYFGNPSEVGGSCQPC 976
>WB|WBGene00002247 [details] [associations]
symbol:lam-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0060465 "pharynx development" evidence=IMP]
[GO:0005604 "basement membrane" evidence=IDA] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] GO:GO:0009792 GO:GO:0002119
InterPro:IPR016140 SMART:SM00499 GO:GO:0010171 GO:GO:0040011
GO:GO:0040017 GO:GO:0000003 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604 GO:GO:0060465
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
HOGENOM:HOG000007552 GeneTree:ENSGT00620000087753
InterPro:IPR013015 PROSITE:PS51116 EMBL:FO080652 RefSeq:NP_500734.3
PaxDb:O44565 EnsemblMetazoa:W03F8.5 GeneID:177292
KEGG:cel:CELE_W03F8.5 UCSC:W03F8.5 CTD:177292 WormBase:W03F8.5
NextBio:896146 Uniprot:O44565
Length = 1790
Score = 150 (57.9 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 50/169 (29%), Positives = 70/169 (41%)
Query: 210 ECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKC-QCDFGYVGVNCSIQCQCNGHADC 268
+ V G + ++ G+CV C + +G+ +C QC G+ G CQCN HA+
Sbjct: 830 DAVGSLGNDCDKQSGQCV--CRE---KGIYGR--QCNQCQPGFWGFPECRTCQCNDHANI 882
Query: 269 AGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEY-CNGHTGLCINASLAS 327
C+ C + T G CD+C+ Y GDPR G +PC C G G A
Sbjct: 883 CDQSS-GACIECRDLTTGHYCDRCQDGYYGDPR-LGVGIPCKPCPCPG--GPTSGYQHAD 938
Query: 328 LPFSPESGG-TSELAAFLDEGPTTRARCMHCG-NHTTGPK-----CEDC 369
+ SG T ++ G RC C NH P+ CE C
Sbjct: 939 TCYLRNSGNNTQDIVCNCKSGYQGE-RCGECAQNHWGSPREVGGTCERC 986
Score = 118 (46.6 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 30/80 (37%), Positives = 38/80 (47%)
Query: 252 VGVNCSIQCQCNGHADCAGPDKLDV----CLRCHNHTKGPQCDKCEPLYVGDPRDNG--E 305
VG C +C CNG+ D A D CL+C +HT+G QC+ C Y GD +
Sbjct: 979 VGGTCE-RCDCNGNIDMAMEGSCDAATGECLKCLHHTEGAQCEHCVDGYYGDAKLKTCQR 1037
Query: 306 CVPCSEY-CNGHTGLCINAS 324
CV C+E N G C S
Sbjct: 1038 CV-CNELGTNSTKGACDRVS 1056
Score = 58 (25.5 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 20/80 (25%), Positives = 30/80 (37%)
Query: 50 CQDCLTSSGGEG--GWHECRWS---SMLNECISPSYEALYCAGGVCGLVLGPHQAPQCPR 104
C C + G G G +C S+ N+C S + + G+ G Q QC
Sbjct: 809 CDQCAIGTYGFGPSGCKKCDCDAVGSLGNDCDKQSGQCVCREKGIYG-----RQCNQCQP 863
Query: 105 SCSAYTQCSTCLRHAHCGWC 124
+ +C TC + H C
Sbjct: 864 GFWGFPECRTCQCNDHANIC 883
>ZFIN|ZDB-GENE-060929-1226 [details] [associations]
symbol:vwde "von Willebrand factor D and EGF
domains" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181
ZFIN:ZDB-GENE-060929-1226 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 Pfam:PF12661 GeneTree:ENSGT00660000095436
EMBL:CT027647 IPI:IPI00799971 ProteinModelPortal:F1Q701
Ensembl:ENSDART00000132999 Uniprot:F1Q701
Length = 212
Score = 134 (52.2 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 47/184 (25%), Positives = 69/184 (37%)
Query: 194 TCDPQSEQCVDLADGFECVCGRGYN-KSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYV 252
TCDP + C C RGY ++ + C P C G G C P KC+C G+
Sbjct: 46 TCDPPCKHAGICIRNNTCFCSRGYEGETCQFANCYPKCKNG---GECLRPGKCRCPSGFG 102
Query: 253 GVNCS-IQCQ--CNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPC 309
G C + C C +C + C+ C + G +C + + C
Sbjct: 103 GKFCHRVVCDAGCWNGGECTAVNGEAKCI-CPSSWTGSRCQ--------------DAI-C 146
Query: 310 SEYC-NGHTGLCINASLASLPFSPESGGTSELAAF----LDEGPTTRARCMHCGNHTTGP 364
+ C NG G+C+ + S P GG A ++ G C TGP
Sbjct: 147 PQGCKNG--GICVAPGICSCP-DGWIGGACHTAVCKKPCVNGGKCVSPNTCRCRGLFTGP 203
Query: 365 KCED 368
+CE+
Sbjct: 204 QCEE 207
Score = 126 (49.4 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 30/101 (29%), Positives = 45/101 (44%)
Query: 201 QCVDLADGFECVCGRGYNKSEEGGECVP-VCSQGCVRG-VCSEPDKCQCDFGYVGVNC-S 257
+C + +C+C + G C +C QGC G +C P C C G++G C +
Sbjct: 120 ECTAVNGEAKCICPSSWT----GSRCQDAICPQGCKNGGICVAPGICSCPDGWIGGACHT 175
Query: 258 IQCQ--CNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLY 296
C+ C C P+ C RC GPQC++ + LY
Sbjct: 176 AVCKKPCVNGGKCVSPN---TC-RCRGLFTGPQCEERKKLY 212
>UNIPROTKB|F1MER7 [details] [associations]
symbol:HSPG2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060351 "cartilage development involved in endochondral
bone morphogenesis" evidence=IEA] [GO:0048738 "cardiac muscle
tissue development" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0030198 "extracellular
matrix organization" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005605 "basal lamina" evidence=IEA] [GO:0002062 "chondrocyte
differentiation" evidence=IEA] [GO:0001958 "endochondral
ossification" evidence=IEA] InterPro:IPR000742 InterPro:IPR002172
InterPro:IPR007110 Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026
PROSITE:PS50068 PROSITE:PS50835 SMART:SM00181 SMART:SM00192
GO:GO:0005615 GO:GO:0008104 GO:GO:0007420 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 GO:GO:0030198
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0048738
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 PROSITE:PS01186 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209
InterPro:IPR002049 InterPro:IPR001791 InterPro:IPR000082
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282 SMART:SM00200
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
GeneTree:ENSGT00530000063501 InterPro:IPR013098 Pfam:PF07679
GO:GO:0048704 GO:GO:0002062 GO:GO:0001958 Pfam:PF02210
GO:GO:0060351 Pfam:PF12661 InterPro:IPR018031 InterPro:IPR000034
Pfam:PF00052 SMART:SM00281 PROSITE:PS51115 OMA:GVTQQCA
EMBL:DAAA02006470 EMBL:DAAA02006471 IPI:IPI01000857 IntAct:F1MER7
Ensembl:ENSBTAT00000022744 Uniprot:F1MER7
Length = 4374
Score = 147 (56.8 bits), Expect = 8.1e-07, Sum P(3) = 8.1e-07
Identities = 36/109 (33%), Positives = 54/109 (49%)
Query: 216 GYNKSEEGGECVPVCSQGCVRGVCSEPDKCQ-CDFGYVGVNCSI------QCQCNGHADC 268
G + + E +C C G RG P CQ CD GY + + +C C+GH +
Sbjct: 1095 GQDPAREVEQCA--CPPG-YRG----PS-CQDCDAGYTRMPSGLYLGTCERCSCHGHTEV 1146
Query: 269 AGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNG--ECVPCSEYCNG 315
P+ C C +HT+GP+C++C+P Y GD + +C PC C+G
Sbjct: 1147 CEPET-GACQECQHHTEGPRCEQCQPGYYGDAQRGTPHDCQPCP--CHG 1192
Score = 135 (52.6 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 230 CSQGCVRGVCSE--PDKCQCDFG-YVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKG 286
C G V C + P + G Y+G +C + C+CNGH+D P+ C +C +H G
Sbjct: 1512 CPPGYVGSSCQDCAPGYTRTGSGLYLG-HCEL-CECNGHSDLCHPET-GACSQCQHHAAG 1568
Query: 287 PQCDKCEPLYVGDPRDNG--ECVPCS 310
C++C P Y GD +C PC+
Sbjct: 1569 EFCEQCAPGYYGDATAGTPEDCQPCA 1594
Score = 123 (48.4 bits), Expect = 3.5e-05, Sum P(4) = 3.5e-05
Identities = 26/61 (42%), Positives = 33/61 (54%)
Query: 251 YVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGE--CVP 308
Y+G CS C CNGHA P CL C ++T+GPQC+KC+ + GD C P
Sbjct: 736 YLGT-CS-GCNCNGHASSCDP-VYGHCLNCQHNTEGPQCNKCKAGFFGDATKATATACRP 792
Query: 309 C 309
C
Sbjct: 793 C 793
Score = 58 (25.5 bits), Expect = 8.1e-07, Sum P(3) = 8.1e-07
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 181 KCPPENECLNDHHTCDPQSEQCVDLADGFECV 212
+C N C+ CD +S+ C D +D F C+
Sbjct: 353 RCVSTNTCIPASFHCDEESD-CPDRSDEFGCM 383
Score = 55 (24.4 bits), Expect = 0.00025, Sum P(4) = 0.00025
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFEC 211
C NEC+ + CD + + C D++D +C
Sbjct: 185 CHRYNECVALEYRCDRRPD-CRDMSDELDC 213
Score = 53 (23.7 bits), Expect = 3.5e-05, Sum P(4) = 3.5e-05
Identities = 18/57 (31%), Positives = 21/57 (36%)
Query: 319 LCINASLASLPFSPESGGTS-ELAAFLDEG--PTTRARCMHCGNHTTGPKCEDCVEG 372
L I AS P G S ++A D G P C GP C+DC G
Sbjct: 1066 LLIQASHTQRPAESRVSGISMDVAVPEDTGQDPAREVEQCACPPGYRGPSCQDCDAG 1122
Score = 47 (21.6 bits), Expect = 8.1e-07, Sum P(3) = 8.1e-07
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 43 RCDQRTDCQD 52
RCD+R DC+D
Sbjct: 197 RCDRRPDCRD 206
Score = 46 (21.3 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 17/63 (26%), Positives = 21/63 (33%)
Query: 49 DCQDCLTSSGGEGGW--HECRWSS----MLNECISPSYEALYCAGGVCGLVLGPHQAPQC 102
DCQ C G H C + + C SP + +C G P Q C
Sbjct: 1184 DCQPCPCHGAPAAGQATHTCFLDTDGHPTCDAC-SPGHSGRHCERCAPGYYGNPSQGQPC 1242
Query: 103 PRS 105
RS
Sbjct: 1243 RRS 1245
Score = 41 (19.5 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 20/67 (29%), Positives = 26/67 (38%)
Query: 58 GGEGGWHECRWSSMLNECISPSYEALYCAG--GVCGLVLGPHQAPQCPRSCSAYTQCS-T 114
G EG + +L+ IS A Y G LG PQ PR+C T+
Sbjct: 130 GSEGNADGAQIQEVLHGVISSGSIASYVTSPQGFQFRRLGT--VPQVPRAC---TEAEFA 184
Query: 115 CLRHAHC 121
C R+ C
Sbjct: 185 CHRYNEC 191
Score = 37 (18.1 bits), Expect = 0.00031, Sum P(4) = 0.00031
Identities = 6/10 (60%), Positives = 7/10 (70%)
Query: 43 RCDQRTDCQD 52
RCD DC+D
Sbjct: 322 RCDGDFDCED 331
>UNIPROTKB|P35555 [details] [associations]
symbol:FBN1 "Fibrillin-1" species:9606 "Homo sapiens"
[GO:0001501 "skeletal system development" evidence=IMP] [GO:0005578
"proteinaceous extracellular matrix" evidence=IDA] [GO:0001527
"microfibril" evidence=IDA] [GO:0005201 "extracellular matrix
structural constituent" evidence=IDA] [GO:0005615 "extracellular
space" evidence=IDA] [GO:0005509 "calcium ion binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005604 "basement membrane" evidence=IDA] [GO:0007507 "heart
development" evidence=IMP] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0031012 "extracellular matrix" evidence=IDA]
[GO:0035582 "sequestering of BMP in extracellular matrix"
evidence=ISS] [GO:0035583 "sequestering of TGFbeta in extracellular
matrix" evidence=ISS] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR011398 InterPro:IPR018097 Pfam:PF07645
PIRSF:PIRSF036312 PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179
SMART:SM00181 Reactome:REACT_118779 InterPro:IPR000152
Reactome:REACT_111102 GO:GO:0005615 GO:GO:0007507 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001501 Orphanet:91387
PROSITE:PS01186 eggNOG:NOG12793 PROSITE:PS00010 GO:GO:0005604
EMBL:CH471082 Orphanet:2623 Orphanet:1885 Orphanet:3449
GO:GO:0001527 InterPro:IPR009030 SUPFAM:SSF57184 InterPro:IPR026823
Pfam:PF12662 GO:GO:0005201 EMBL:AC084757 GO:GO:0035582 CTD:2200
HOGENOM:HOG000231768 HOVERGEN:HBG005643 KO:K06825
Gene3D:3.90.290.10 InterPro:IPR017878 PANTHER:PTHR24039:SF0
Pfam:PF00683 SUPFAM:SSF57581 PROSITE:PS51364 EMBL:L13923
EMBL:AB177803 EMBL:GU143398 EMBL:AC022467 EMBL:AC084758
EMBL:BC146854 EMBL:L19896 EMBL:X63556 EMBL:X62008 EMBL:S54426
EMBL:S54425 IPI:IPI00328113 PIR:A47221 RefSeq:NP_000129.3
UniGene:Hs.591133 PDB:1APJ PDB:1EMN PDB:1EMO PDB:1LMJ PDB:1UZJ
PDB:1UZK PDB:1UZP PDB:1UZQ PDB:2W86 PDBsum:1APJ PDBsum:1EMN
PDBsum:1EMO PDBsum:1LMJ PDBsum:1UZJ PDBsum:1UZK PDBsum:1UZP
PDBsum:1UZQ PDBsum:2W86 ProteinModelPortal:P35555 SMR:P35555
DIP:DIP-29985N IntAct:P35555 MINT:MINT-206075 STRING:P35555
PhosphoSite:P35555 DMDM:311033452 PaxDb:P35555 PRIDE:P35555
Ensembl:ENST00000316623 GeneID:2200 KEGG:hsa:2200
GeneCards:GC15M048700 HGNC:HGNC:3603 HPA:CAB002670 HPA:HPA017759
HPA:HPA021057 MIM:102370 MIM:129600 MIM:134797 MIM:154700
MIM:182212 MIM:184900 MIM:604308 MIM:608328 MIM:614185
neXtProt:NX_P35555 Orphanet:969 Orphanet:2084 Orphanet:284963
Orphanet:284979 Orphanet:300382 Orphanet:2462 Orphanet:2833
PharmGKB:PA28016 InParanoid:P35555 OMA:DATGRIC OrthoDB:EOG45TCM7
ChiTaRS:FBN1 EvolutionaryTrace:P35555 GenomeRNAi:2200 NextBio:8891
ArrayExpress:P35555 Bgee:P35555 CleanEx:HS_FBN1
Genevestigator:P35555 GermOnline:ENSG00000166147 GO:GO:0035583
Uniprot:P35555
Length = 2871
Score = 151 (58.2 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 48/162 (29%), Positives = 73/162 (45%)
Query: 180 VKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG---C 234
+KC +EC N H C Q C + + C+C GY + +G C + CS+ C
Sbjct: 1359 IKCTDLDECSNGTHMCS-QHADCKNTMGSYRCLCKEGY--TGDGFTCTDLDECSENLNLC 1415
Query: 235 VRGVC-SEPD--KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCL--RCHNHTKGPQC 289
G C + P +C+CD G+V C+ +C+ P+ +C+ CHN +C
Sbjct: 1416 GNGQCLNAPGGYRCECDMGFVPSADGKACE--DIDECSLPN---ICVFGTCHNLPGLFRC 1470
Query: 290 DKCEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFS 331
+ CE Y D R G C +E C T CI+ + + P S
Sbjct: 1471 E-CEIGYELD-RSGGNCTDVNE-CLDPT-TCISGNCVNTPGS 1508
Score = 145 (56.1 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 60/213 (28%), Positives = 87/213 (40%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG---CVR 236
C +EC ++ + CD QC ++ + C+C G+ SE+ CV V C C+
Sbjct: 1236 CTDIDECEDNPNICD--GGQCTNIPGEYRCLCYDGFMASEDMKTCVDVNECDLNPNICLS 1293
Query: 237 GVCSEPDK---CQCDFGYVG----VNCSI--QCQCNGHADCAGPDKLDVCLRCHNHTKGP 287
G C C CD GY G C+ +C+ H +C K VC +T G
Sbjct: 1294 GTCENTKGSFICHCDMGYSGKKGKTGCTDINECEIGAH-NCG---KHAVC----TNTAGS 1345
Query: 288 -QCDKCEPLYVGDP---RDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSE--LA 341
+C C P ++GD D EC + C+ H C N ++ S + G T +
Sbjct: 1346 FKCS-CSPGWIGDGIKCTDLDECSNGTHMCSQHAD-CKN-TMGSYRCLCKEGYTGDGFTC 1402
Query: 342 AFLDEGPTTRARCMH--CGNHTTGPKCEDCVEG 372
LDE C + C N G +CE C G
Sbjct: 1403 TDLDECSENLNLCGNGQCLNAPGGYRCE-CDMG 1434
Score = 135 (52.6 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 58/205 (28%), Positives = 80/205 (39%)
Query: 186 NECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG---CVRGVCS 240
+EC H C ++ +CV+ + C+C GY G CV + C+Q C +C
Sbjct: 2404 DECKVIHDVC--RNGECVNDRGSYHCICKTGYTPDITGTSCVDLNECNQAPKPC-NFICK 2460
Query: 241 EPD---KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVC-LRCHNHTKGPQCDKCEPLY 296
+ +C C GY+ C+ +CA K C C N G C KC P +
Sbjct: 2461 NTEGSYQCSCPKGYILQEDGRSCK--DLDECA--TKQHNCQFLCVNTIGGFTC-KCPPGF 2515
Query: 297 VGDPR---DNGECVPCSEYCNGHTGLCINA--SLA---SLPFSPESGGTSELAAFLDEGP 348
DN EC C G G+C N S FS + G+S +DE
Sbjct: 2516 TQHHTSCIDNNECTSDINLC-GSKGICQNTPGSFTCECQRGFSLDQTGSS--CEDVDECE 2572
Query: 349 TTRARCMH-CGNHTTGPKCEDCVEG 372
RC H C N G +C C +G
Sbjct: 2573 GNH-RCQHGCQNIIGGYRCS-CPQG 2595
Score = 50 (22.7 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 17/49 (34%), Positives = 18/49 (36%)
Query: 40 CPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGG 88
C L R C S G G EC M N +P YE L C G
Sbjct: 967 CTLPIAGRHRMDACCCSVGAAWGTEECEECPMRN---TPEYEEL-CPRG 1011
Score = 47 (21.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 20/87 (22%), Positives = 29/87 (33%)
Query: 37 GSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEAL--YCAGGVCGLVL 94
G C + Q+C + GEG W C + EA C G G+++
Sbjct: 2067 GGKCSSPKSRNHSKQECCCALKGEG------WGDPCELCPTEPDEAFRQICPYG-SGIIV 2119
Query: 95 GPHQAPQCPRSCSAYTQCSTCLRHAHC 121
GP + C C +H C
Sbjct: 2120 GPDDSAVDMDECKEPDVC----KHGQC 2142
Score = 46 (21.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 16/53 (30%), Positives = 20/53 (37%)
Query: 44 CDQRTDCQD------CLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVC 90
C Q DC++ CL G G C + L+EC S C G C
Sbjct: 1374 CSQHADCKNTMGSYRCLCKEGYTGDGFTC---TDLDEC---SENLNLCGNGQC 1420
Score = 44 (20.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 20/75 (26%), Positives = 27/75 (36%)
Query: 40 CPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQA 99
CP+ R D + C E G H+C M EC + Y +CG G +
Sbjct: 2232 CPVGYVLREDRRMCKDEDECEEGKHDCTEKQM--EC--KNLIGTYMC--ICGP--GYQRR 2283
Query: 100 PQCPRSCSAYTQCST 114
P C +C T
Sbjct: 2284 PD-GEGCVDENECQT 2297
>ZFIN|ZDB-GENE-090112-3 [details] [associations]
symbol:fbn2b "fibrillin 2b" species:7955 "Danio
rerio" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=IMP] [GO:0001570
"vasculogenesis" evidence=IMP] [GO:0048570 "notochord
morphogenesis" evidence=IGI;IMP] [GO:0003160 "endocardium
morphogenesis" evidence=IMP] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR011398 InterPro:IPR018097 Pfam:PF07645
PIRSF:PIRSF036312 PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 ZFIN:ZDB-GENE-090112-3
GO:GO:0005578 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 GO:GO:0001570 eggNOG:NOG12793 PROSITE:PS00010
InterPro:IPR026823 Pfam:PF12662 GO:GO:0005201 GO:GO:0048570
HOGENOM:HOG000231768 HOVERGEN:HBG005643 Gene3D:3.90.290.10
InterPro:IPR017878 PANTHER:PTHR24039:SF0 Pfam:PF00683
SUPFAM:SSF57581 PROSITE:PS51364 EMBL:EU449516 IPI:IPI00772654
RefSeq:NP_001129262.1 UniGene:Dr.51457 ProteinModelPortal:B6CS38
STRING:B6CS38 GeneID:571786 KEGG:dre:571786 CTD:571786
NextBio:20890698 Uniprot:B6CS38
Length = 2868
Score = 151 (58.2 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 83/356 (23%), Positives = 129/356 (36%)
Query: 8 YGMSGQVAYTLEP-RTVKTDANRTNIKLKTGSSCPLRCDQRTDCQDCLTSSGGEGGWHEC 66
Y S + Y + P R D + I C C +C + S G +
Sbjct: 1183 YQCSCETGYQVTPDRQGCVDIDECTIM---NGGCDTHCTNSEGSYEC-SCSEGYALMPDL 1238
Query: 67 RWSSMLNECI-SPSYEALYCAGGVCGLVLGPHQ--------APQCPRSCSAYTQC----S 113
R + ++EC +P C GG C + G ++ A R+C +C +
Sbjct: 1239 RTCADIDECEDTPDI----CDGGQCTNIPGEYRCLCYDGFMASMDMRTCIDVNECDLNPN 1294
Query: 114 TCLRHAHC----G----WCALQRDTTGGMGVCTXXXXXXXXXXXXXXTCDILFYQTYPDQ 165
CL H C G C L G CT CD+
Sbjct: 1295 ICL-HGDCENTKGSFICHCQLGYFVKKGSTGCTDVDECEIGAH----NCDLHAACVNAPG 1349
Query: 166 VIEVNNNDSFSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGE 225
+ D + + +KC +EC+ + H C+P +E C++ + C C G+N +G
Sbjct: 1350 SFKCRCRDGWEGDGIKCIDVDECVTEEHNCNPNAE-CLNTPGSYRCSCKEGFNG--DGFS 1406
Query: 226 CVPV--CSQG---CVRGVC-SEPD--KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVC 277
C + C+ C G C + P +C+C+ G+ S CQ D + ++C
Sbjct: 1407 CSDMDECADNVNLCENGQCLNAPGGYRCECEMGFTPTEDSKACQ-----DIDECNFQNIC 1461
Query: 278 L--RCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFS 331
+ C N +C C+ Y D R G C +E C CIN +LP S
Sbjct: 1462 VFGSCQNLPGMFRC-VCDYGYELD-RSGGNCTDINE-CFDPVN-CINGVCVNLPGS 1513
Score = 120 (47.3 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 59/207 (28%), Positives = 75/207 (36%)
Query: 186 NECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG--CVRGVCSE 241
NEC+ + C + C++ F C C GYN G CV CS G C G CS
Sbjct: 2133 NECVENPEICG--NGLCINTDGSFRCECPFGYNLDYTGVNCVDTDECSIGNPCGNGTCSN 2190
Query: 242 -PD--KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYV- 297
P +C C G+ C +CA + L RC N +C C YV
Sbjct: 2191 VPGGFECSCQEGF---EPGPMMTCEDINECA-VNPLLCAFRCVNTFGSYEC-MCPTGYVL 2245
Query: 298 GDP----RDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGT----SELAAFLDEGPT 349
D RD EC + C C N + P G T E L+E +
Sbjct: 2246 RDDNRMCRDQDECAEGLDDCASRGMACKNQIGTFMCICPP-GMTRRPDGEGCMDLNECRS 2304
Query: 350 TRARCMH--CGNHTTGPKCEDCVEGKE 374
C + C N +CE C EG E
Sbjct: 2305 KPGICKNGRCVNTVGSYRCE-CNEGFE 2330
Score = 55 (24.4 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 17/53 (32%), Positives = 22/53 (41%)
Query: 72 LNECISPSYEALYCAGGVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHCGWC 124
++EC + S C GG C G + CPR T S C+ H G C
Sbjct: 288 IDECATISG---VCDGGECTNTAGSYVCT-CPRGYITSTDGSRCVDH-RIGTC 335
>UNIPROTKB|F1PIA3 [details] [associations]
symbol:FBN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR011398 InterPro:IPR018097 Pfam:PF07645
PIRSF:PIRSF036312 PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 GO:GO:0005578 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186 PROSITE:PS00010
InterPro:IPR009030 SUPFAM:SSF57184 InterPro:IPR026823 Pfam:PF12662
GO:GO:0005201 GeneTree:ENSGT00700000104076 CTD:2200 KO:K06825
Gene3D:3.90.290.10 InterPro:IPR017878 PANTHER:PTHR24039:SF0
Pfam:PF00683 SUPFAM:SSF57581 PROSITE:PS51364 OMA:DATGRIC
EMBL:AAEX03016111 RefSeq:XP_861706.2 Ensembl:ENSCAFT00000023394
GeneID:478293 KEGG:cfa:478293 Uniprot:F1PIA3
Length = 2871
Score = 151 (58.2 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 48/162 (29%), Positives = 73/162 (45%)
Query: 180 VKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG---C 234
+KC +EC N H C Q C + + C+C GY + +G C + CS+ C
Sbjct: 1359 IKCTDLDECSNGTHMCS-QHADCKNTMGSYRCLCKEGY--TGDGFTCTDLDECSENLNLC 1415
Query: 235 VRGVC-SEPD--KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCL--RCHNHTKGPQC 289
G C + P +C+CD G+V C+ +C+ P+ +C+ CHN +C
Sbjct: 1416 GNGQCLNAPGGYRCECDMGFVPSADGKACE--DIDECSLPN---ICVFGTCHNLPGLFRC 1470
Query: 290 DKCEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFS 331
+ CE Y D R G C +E C T CI+ + + P S
Sbjct: 1471 E-CEIGYELD-RSGGNCTDVNE-CLDPT-TCISGNCVNTPGS 1508
Score = 148 (57.2 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 60/213 (28%), Positives = 88/213 (41%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG---CVR 236
C +EC ++ + CD QC ++ + C+C G+ SE+ CV V C C+
Sbjct: 1236 CTDIDECEDNPNICD--GGQCTNIPGEYRCLCYDGFMASEDMKTCVDVNECDLNPNICLS 1293
Query: 237 GVCSEPDK---CQCDFGYVG----VNCSI--QCQCNGHADCAGPDKLDVCLRCHNHTKGP 287
G C C CD GY G C+ +C+ H +C D+ VC +T G
Sbjct: 1294 GTCENTKGSFICHCDMGYSGKKGKTGCTDINECEIGAH-NC---DRHAVC----TNTAGS 1345
Query: 288 -QCDKCEPLYVGDP---RDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSE--LA 341
+C C P ++GD D EC + C+ H C N ++ S + G T +
Sbjct: 1346 FKCS-CSPGWIGDGIKCTDLDECSNGTHMCSQHAD-CKN-TMGSYRCLCKEGYTGDGFTC 1402
Query: 342 AFLDEGPTTRARCMH--CGNHTTGPKCEDCVEG 372
LDE C + C N G +CE C G
Sbjct: 1403 TDLDECSENLNLCGNGQCLNAPGGYRCE-CDMG 1434
Score = 130 (50.8 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 58/205 (28%), Positives = 79/205 (38%)
Query: 186 NECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG---CVRGVCS 240
+EC H C ++ +CV+ + C+C GY G CV + C+Q C +C
Sbjct: 2404 DECKVIHDVC--RNGECVNDRGSYHCLCKNGYTPDITGTSCVDLNECNQAPKPC-NFICK 2460
Query: 241 EPD---KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVC-LRCHNHTKGPQCDKCEPLY 296
+ +C C GY+ C+ +CA K C C N T G KC P +
Sbjct: 2461 NTEGSFQCSCPKGYILQEDGRSCK--DLDECA--TKQHNCQFLCVN-TIGSFTCKCPPGF 2515
Query: 297 VGDPR---DNGECVPCSEYCNGHTGLCINA--SLA---SLPFSPESGGTSELAAFLDEGP 348
DN EC C G G+C N S FS + G S +DE
Sbjct: 2516 TQHHTACIDNNECTSDINLC-GSKGICQNTPGSFTCECQRGFSLDQSGAS--CEDVDECE 2572
Query: 349 TTRARCMH-CGNHTTGPKCEDCVEG 372
RC H C N G +C C +G
Sbjct: 2573 GNH-RCQHGCQNIIGGYRCS-CPQG 2595
Score = 47 (21.6 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 20/87 (22%), Positives = 29/87 (33%)
Query: 37 GSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEAL--YCAGGVCGLVL 94
G C + Q+C + GEG W C + EA C G G+++
Sbjct: 2067 GGKCSSPKSRNHSKQECCCALKGEG------WGDPCELCPTEPDEAFRQICPYG-SGIIV 2119
Query: 95 GPHQAPQCPRSCSAYTQCSTCLRHAHC 121
GP + C C +H C
Sbjct: 2120 GPDDSAVDMDECKEPDVC----KHGQC 2142
Score = 46 (21.3 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 16/53 (30%), Positives = 20/53 (37%)
Query: 44 CDQRTDCQD------CLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVC 90
C Q DC++ CL G G C + L+EC S C G C
Sbjct: 1374 CSQHADCKNTMGSYRCLCKEGYTGDGFTC---TDLDEC---SENLNLCGNGQC 1420
>UNIPROTKB|F1N4K8 [details] [associations]
symbol:FBN1 "Fibrillin-1" species:9913 "Bos taurus"
[GO:0007507 "heart development" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0001527 "microfibril" evidence=IEA] [GO:0001501
"skeletal system development" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR011398 InterPro:IPR018097
Pfam:PF07645 PIRSF:PIRSF036312 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005615
GO:GO:0007507 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0001501 PROSITE:PS01186 PROSITE:PS00010 GO:GO:0005604
GO:GO:0001527 InterPro:IPR009030 SUPFAM:SSF57184 InterPro:IPR026823
Pfam:PF12662 GO:GO:0005201 GeneTree:ENSGT00700000104076
IPI:IPI00714359 UniGene:Bt.107024 Gene3D:3.90.290.10
InterPro:IPR017878 PANTHER:PTHR24039:SF0 Pfam:PF00683
SUPFAM:SSF57581 PROSITE:PS51364 OMA:DATGRIC EMBL:DAAA02029120
EMBL:DAAA02029121 EMBL:DAAA02029122 Ensembl:ENSBTAT00000002944
Uniprot:F1N4K8
Length = 2871
Score = 151 (58.2 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 48/162 (29%), Positives = 73/162 (45%)
Query: 180 VKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG---C 234
+KC +EC N H C Q C + + C+C GY + +G C + CS+ C
Sbjct: 1359 IKCTDLDECSNGTHMCS-QHADCKNTMGSYRCLCKEGY--TGDGFTCTDLDECSENLNLC 1415
Query: 235 VRGVC-SEPD--KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCL--RCHNHTKGPQC 289
G C + P +C+CD G+V C+ +C+ P+ +C+ CHN +C
Sbjct: 1416 GNGQCLNAPGGYRCECDMGFVPSADGKACE--DIDECSLPN---ICVFGTCHNLPGLFRC 1470
Query: 290 DKCEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFS 331
+ CE Y D R G C +E C T CI+ + + P S
Sbjct: 1471 E-CEIGYELD-RSGGNCTDVNE-CLDPT-TCISGNCVNTPGS 1508
Score = 148 (57.2 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 60/213 (28%), Positives = 88/213 (41%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG---CVR 236
C +EC ++ + CD QC ++ + C+C G+ SE+ CV V C C+
Sbjct: 1236 CTDIDECEDNPNICD--GGQCTNIPGEYRCLCYDGFMASEDMKTCVDVNECDLNPNICLS 1293
Query: 237 GVCSEPDK---CQCDFGYVG----VNCSI--QCQCNGHADCAGPDKLDVCLRCHNHTKGP 287
G C C CD GY G C+ +C+ H +C D+ VC +T G
Sbjct: 1294 GTCENTKGSFICHCDMGYSGKKGKTGCTDINECEIGAH-NC---DRHAVC----TNTAGS 1345
Query: 288 -QCDKCEPLYVGDP---RDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSE--LA 341
+C C P ++GD D EC + C+ H C N ++ S + G T +
Sbjct: 1346 FKCS-CSPGWIGDGIKCTDLDECSNGTHMCSQHAD-CKN-TMGSYRCLCKEGYTGDGFTC 1402
Query: 342 AFLDEGPTTRARCMH--CGNHTTGPKCEDCVEG 372
LDE C + C N G +CE C G
Sbjct: 1403 TDLDECSENLNLCGNGQCLNAPGGYRCE-CDMG 1434
Score = 129 (50.5 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 58/205 (28%), Positives = 79/205 (38%)
Query: 186 NECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG---CVRGVCS 240
+EC H C ++ +CV+ + C+C GY G CV + C+Q C +C
Sbjct: 2404 DECKVIHDVC--RNGECVNDRGSYHCICKTGYTPDITGTACVDLNECNQAPKPC-NFICK 2460
Query: 241 EPD---KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVC-LRCHNHTKGPQCDKCEPLY 296
+ +C C GY+ C+ +CA K C C N T G KC P +
Sbjct: 2461 NTEGSYQCSCPKGYILQEDGRSCK--DLDECA--TKQHNCQFLCVN-TIGSFTCKCPPGF 2515
Query: 297 VGDPR---DNGECVPCSEYCNGHTGLCINA--SLA---SLPFSPESGGTSELAAFLDEGP 348
DN EC C G G+C N S FS + G S +DE
Sbjct: 2516 TQHHTACIDNNECTSDINLC-GSKGICQNTPGSFTCECQRGFSLDPSGAS--CEDVDECE 2572
Query: 349 TTRARCMH-CGNHTTGPKCEDCVEG 372
RC H C N G +C C +G
Sbjct: 2573 GNH-RCQHGCQNIIGGYRCS-CPQG 2595
Score = 47 (21.6 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 20/87 (22%), Positives = 29/87 (33%)
Query: 37 GSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEAL--YCAGGVCGLVL 94
G C + Q+C + GEG W C + EA C G G+++
Sbjct: 2067 GGKCSSPKSRNHSKQECCCALKGEG------WGDPCELCPTEPDEAFRQICPYG-SGIIV 2119
Query: 95 GPHQAPQCPRSCSAYTQCSTCLRHAHC 121
GP + C C +H C
Sbjct: 2120 GPDDSAVDMDECKEPDVC----KHGQC 2142
Score = 46 (21.3 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 16/53 (30%), Positives = 20/53 (37%)
Query: 44 CDQRTDCQD------CLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVC 90
C Q DC++ CL G G C + L+EC S C G C
Sbjct: 1374 CSQHADCKNTMGSYRCLCKEGYTGDGFTC---TDLDEC---SENLNLCGNGQC 1420
>UNIPROTKB|P98133 [details] [associations]
symbol:FBN1 "Fibrillin-1" species:9913 "Bos taurus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR011398
InterPro:IPR018097 Pfam:PF07645 PIRSF:PIRSF036312 PROSITE:PS01187
PROSITE:PS50026 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005578 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 eggNOG:NOG12793 PROSITE:PS00010 InterPro:IPR009030
SUPFAM:SSF57184 InterPro:IPR026823 Pfam:PF12662 GO:GO:0005201
EMBL:L28748 IPI:IPI00714359 PIR:A55567 RefSeq:NP_776478.1
UniGene:Bt.107024 ProteinModelPortal:P98133 SMR:P98133
STRING:P98133 PRIDE:P98133 GeneID:281154 KEGG:bta:281154 CTD:2200
HOGENOM:HOG000231768 HOVERGEN:HBG005643 KO:K06825 NextBio:20805217
Gene3D:3.90.290.10 InterPro:IPR017878 PANTHER:PTHR24039:SF0
Pfam:PF00683 SUPFAM:SSF57581 PROSITE:PS51364 Uniprot:P98133
Length = 2871
Score = 151 (58.2 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 48/162 (29%), Positives = 73/162 (45%)
Query: 180 VKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG---C 234
+KC +EC N H C Q C + + C+C GY + +G C + CS+ C
Sbjct: 1359 IKCTDLDECSNGTHMCS-QHADCKNTMGSYRCLCKEGY--TGDGFTCTDLDECSENLNLC 1415
Query: 235 VRGVC-SEPD--KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCL--RCHNHTKGPQC 289
G C + P +C+CD G+V C+ +C+ P+ +C+ CHN +C
Sbjct: 1416 GNGQCLNAPGGYRCECDMGFVPSADGKACE--DIDECSLPN---ICVFGTCHNLPGLFRC 1470
Query: 290 DKCEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFS 331
+ CE Y D R G C +E C T CI+ + + P S
Sbjct: 1471 E-CEIGYELD-RSGGNCTDVNE-CLDPT-TCISGNCVNTPGS 1508
Score = 148 (57.2 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 60/213 (28%), Positives = 88/213 (41%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG---CVR 236
C +EC ++ + CD QC ++ + C+C G+ SE+ CV V C C+
Sbjct: 1236 CTDIDECEDNPNICD--GGQCTNIPGEYRCLCYDGFMASEDMKTCVDVNECDLNPNICLS 1293
Query: 237 GVCSEPDK---CQCDFGYVG----VNCSI--QCQCNGHADCAGPDKLDVCLRCHNHTKGP 287
G C C CD GY G C+ +C+ H +C D+ VC +T G
Sbjct: 1294 GTCENTKGSFICHCDMGYSGKKGKTGCTDINECEIGAH-NC---DRHAVC----TNTAGS 1345
Query: 288 -QCDKCEPLYVGDP---RDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSE--LA 341
+C C P ++GD D EC + C+ H C N ++ S + G T +
Sbjct: 1346 FKCS-CSPGWIGDGIKCTDLDECSNGTHMCSQHAD-CKN-TMGSYRCLCKEGYTGDGFTC 1402
Query: 342 AFLDEGPTTRARCMH--CGNHTTGPKCEDCVEG 372
LDE C + C N G +CE C G
Sbjct: 1403 TDLDECSENLNLCGNGQCLNAPGGYRCE-CDMG 1434
Score = 127 (49.8 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 58/205 (28%), Positives = 79/205 (38%)
Query: 186 NECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG---CVRGVCS 240
+EC H C ++ +CV+ + C+C GY G CV + C+Q C +C
Sbjct: 2404 DECKVIHDVC--RNGECVNDRGSYHCICKTGYTPDITGTACVDLNECNQAPKPC-NFICK 2460
Query: 241 EPD---KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVC-LRCHNHTKGPQCDKCEPLY 296
+ +C C GY+ C+ +CA K C C N T G KC P +
Sbjct: 2461 NTEGSYQCSCPKGYILQEDGRSCK--DLDECA--TKQHNCQFLCVN-TIGSFTCKCPPGF 2515
Query: 297 VGDPR---DNGECVPCSEYCNGHTGLCINA--SLA---SLPFSPESGGTSELAAFLDEGP 348
DN EC C G G+C N S FS + G S +DE
Sbjct: 2516 TQHHTACIDNNECTSDINLC-GSKGICQNTPGSFTCECQRGFSLDPTGAS--CEDVDECE 2572
Query: 349 TTRARCMH-CGNHTTGPKCEDCVEG 372
RC H C N G +C C +G
Sbjct: 2573 GNH-RCQHGCQNIIGGYRCS-CPQG 2595
Score = 47 (21.6 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 20/87 (22%), Positives = 29/87 (33%)
Query: 37 GSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEAL--YCAGGVCGLVL 94
G C + Q+C + GEG W C + EA C G G+++
Sbjct: 2067 GGKCSSPKSRNHSKQECCCALKGEG------WGDPCELCPTEPDEAFRQICPYG-SGIIV 2119
Query: 95 GPHQAPQCPRSCSAYTQCSTCLRHAHC 121
GP + C C +H C
Sbjct: 2120 GPDDSAVDMDECKEPDVC----KHGQC 2142
Score = 46 (21.3 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 16/53 (30%), Positives = 20/53 (37%)
Query: 44 CDQRTDCQD------CLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVC 90
C Q DC++ CL G G C + L+EC S C G C
Sbjct: 1374 CSQHADCKNTMGSYRCLCKEGYTGDGFTC---TDLDEC---SENLNLCGNGQC 1420
>UNIPROTKB|E2RS46 [details] [associations]
symbol:FBN2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060346 "bone trabecula formation"
evidence=IEA] [GO:0045669 "positive regulation of osteoblast
differentiation" evidence=IEA] [GO:0035583 "sequestering of TGFbeta
in extracellular matrix" evidence=IEA] [GO:0030501 "positive
regulation of bone mineralization" evidence=IEA] [GO:0030326
"embryonic limb morphogenesis" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0005201 "extracellular
matrix structural constituent" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR011398 InterPro:IPR018097
Pfam:PF07645 PIRSF:PIRSF036312 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005578
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030326
GO:GO:0030501 GO:GO:0045669 PROSITE:PS01186 PROSITE:PS00010
InterPro:IPR009030 SUPFAM:SSF57184 InterPro:IPR026823 Pfam:PF12662
GO:GO:0005201 GO:GO:0060346 GeneTree:ENSGT00700000104076
Gene3D:3.90.290.10 InterPro:IPR017878 PANTHER:PTHR24039:SF0
Pfam:PF00683 SUPFAM:SSF57581 PROSITE:PS51364 GO:GO:0035583 CTD:2201
OMA:SGRNCID EMBL:AAEX03007759 RefSeq:XP_538612.2
Ensembl:ENSCAFT00000001089 GeneID:481491 KEGG:cfa:481491
Uniprot:E2RS46
Length = 2921
Score = 151 (58.2 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 85/348 (24%), Positives = 129/348 (37%)
Query: 8 YGMSGQVAYTLEP-RTVKTDANRTNIKLKTGSSCPLRCDQRTDCQDCLTSSGGEGGWHEC 66
Y S Y P R TD + I C RC +C + S G +
Sbjct: 1232 YQCSCNPGYQATPDRQGCTDIDECMIM---NGGCDTRCTNSEGSYEC-SCSEGYALMPDG 1287
Query: 67 RWSSMLNECIS-PSYEALYCAGGVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHCGW-- 123
R + ++EC + P C GG C + G ++ C A TC+ C
Sbjct: 1288 RSCADIDECENNPDI----CDGGQCTNIPGEYRC-LCYDGFMASMDMKTCIDVNECDLNS 1342
Query: 124 --CAL-QRDTTGGMGVCTXXXXXXXXXXXXXXT----CDILFYQTYPDQVIE-VNNNDSF 175
C + + T G +C T C+I + D +N SF
Sbjct: 1343 NICMFGECENTKGSFICHCQLGYSVKKGTTGCTDVDECEIGAHNC--DMHASCLNVPGSF 1400
Query: 176 S------W--NYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECV 227
W N +KC +EC N H C + QCV+ + C C G+ + +G C
Sbjct: 1401 KCSCREGWVGNGIKCIDLDECSNGTHQCSINA-QCVNTPGSYRCACSEGF--TGDGFTCS 1457
Query: 228 PV--CSQG---CVRGVC-SEPD--KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCL- 278
V C++ C G C + P +C+C+ G+ + S CQ +C+ + +C+
Sbjct: 1458 DVDECAENINLCENGQCLNVPGAYRCECEMGFTPASDSRSCQ--DIDECSFQN---ICVF 1512
Query: 279 -RCHNHTKGPQCDKCEPLYVGDPRDNGECVP---CSEYCNGHTGLCIN 322
C+N C C+ Y D R G C C++ N GLC+N
Sbjct: 1513 GTCNNLPGMFHCI-CDDGYELD-RTGGNCTDIDECADPINCVNGLCVN 1558
Score = 128 (50.1 bits), Expect = 0.00032, P = 0.00032
Identities = 52/210 (24%), Positives = 85/210 (40%)
Query: 172 NDSFSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV-- 229
++ F+ + C +EC + + C+ + QC+++ + C C G+ + + C +
Sbjct: 1446 SEGFTGDGFTCSDVDECAENINLCE--NGQCLNVPGAYRCECEMGFTPASDSRSCQDIDE 1503
Query: 230 CS-QG-CVRGVCSE-PDK--CQCDFGY----VGVNCSIQCQCNGHADCAGPDKLDVCLRC 280
CS Q CV G C+ P C CD GY G NC+ +C +C +C+
Sbjct: 1504 CSFQNICVFGTCNNLPGMFHCICDDGYELDRTGGNCTDIDECADPINCVN----GLCV-- 1557
Query: 281 HNHTKGP-QCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSE 339
+T G +C+ C P + +P G CV + G C L F P G+
Sbjct: 1558 --NTPGRYECN-CPPDFQLNPTGVG-CV------DNRVGNCY------LKFGPRGDGSLS 1601
Query: 340 LAAFLDEGPTTRARCMHCGNHTTGPKCEDC 369
+ G + + C G P CE C
Sbjct: 1602 CNTEIGVGVSRSSCCCSLGKAWGNP-CETC 1630
>UNIPROTKB|G3I6Z6 [details] [associations]
symbol:I79_019276 "Neurogenic locus notch-like protein 1"
species:10029 "Cricetulus griseus" [GO:0000139 "Golgi membrane"
evidence=TAS] [GO:0005796 "Golgi lumen" evidence=TAS]
InterPro:IPR002110 InterPro:IPR000742 InterPro:IPR000800
InterPro:IPR001881 InterPro:IPR008297 InterPro:IPR010660
InterPro:IPR011656 InterPro:IPR018097 InterPro:IPR022362
Pfam:PF00008 Pfam:PF00023 Pfam:PF00066 Pfam:PF06816 Pfam:PF07645
Pfam:PF07684 PIRSF:PIRSF002279 PRINTS:PR01452 PRINTS:PR01984
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258
SMART:SM00004 SMART:SM00179 SMART:SM00181 SMART:SM00248
InterPro:IPR000152 GO:GO:0016021 GO:GO:0007275 GO:GO:0030154
GO:GO:0000139 GO:GO:0006355 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0007219
GO:GO:0005509 GO:GO:0004872 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 PROSITE:PS00010 GO:GO:0005796 GO:GO:0050793
Pfam:PF12661 SUPFAM:SSF90193 InterPro:IPR024600 Pfam:PF11936
EMBL:JH001398 Uniprot:G3I6Z6
Length = 2412
Score = 150 (57.9 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 59/198 (29%), Positives = 81/198 (40%)
Query: 201 QCVDLADGFECVCGRGYNKSE---EGGECVP-VCSQG-CVRGVCSEPDKCQCDFGYVGVN 255
+C+D + + CVC GY + + EC P C G C GV + C C GY G +
Sbjct: 500 KCLDGPNTYTCVCTEGYTGTHCEVDIDECDPDPCHYGFCKDGVATFT--CLCQPGYTGHH 557
Query: 256 CSI---QCQ---CNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPC 309
C +C C C D +CL C T GP C+ +P D+G C+
Sbjct: 558 CETNINECHSQPCRHGGTCQDRDNSYLCL-CLKGTTGPNCEINLDDCASNPCDSGTCLDK 616
Query: 310 SE-Y---CN-GHTGLCINASLASLPFSP-ESGGTSE--LAAFL---DEG---PTTRARCM 355
+ Y C G+TG N ++ SP +GGT E +A F EG PT +
Sbjct: 617 IDGYECACEPGYTGSMCNVNIDECAGSPCHNGGTCEDGIAGFTCRCPEGYHDPTCLSEVN 676
Query: 356 HCG-NHTTGPKCEDCVEG 372
C N C D + G
Sbjct: 677 ECNSNPCIHGACRDGLNG 694
Score = 141 (54.7 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 48/141 (34%), Positives = 59/141 (41%)
Query: 188 CLNDHHTCDPQSEQ----CVDLADGFECVCGRGY---NKSEEGGECVPVCSQGCVRG-VC 239
C ++ C P Q C D GF C C GY N SEE EC+ SQ C G C
Sbjct: 1100 CEDEVDECSPNPCQNGATCTDYLGGFSCKCVAGYHGSNCSEEINECL---SQPCQNGGTC 1156
Query: 240 ---SEPDKCQCDFGYVGVNCSIQCQ-CNGHADCAGPDKLDVCLR---CHNHTKGPQCDKC 292
+ KC C G GV+C I C+ H D A + C C + G C C
Sbjct: 1157 IDLTNTYKCSCPRGTQGVHCEINVDDCHPHLDPAS--RSPKCFNNGTCVDQVGGYSCT-C 1213
Query: 293 EPLYVGD--PRDNGECV--PC 309
P +VG+ D EC+ PC
Sbjct: 1214 PPGFVGERCEGDINECLSNPC 1234
Score = 132 (51.5 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 47/151 (31%), Positives = 64/151 (42%)
Query: 181 KCPPE-NECLNDHHTCDPQSEQ-CVDLADGFECVCGRGYN----KSEEGGECVPVCSQGC 234
+C + NECL++ CDP+ Q CV + F C C G+ +S G C G
Sbjct: 1221 RCEGDINECLSN--PCDPRGTQDCVQRVNDFHCECRAGHTGRRCESVINGCRGKPCKNGG 1278
Query: 235 VRGVCSEPDK---CQCDFGYVGVNC--------SIQCQCNGHADCAGPDKLDVCLRCHNH 283
V V S + C+C G+ G C S++C NG +GP + CL C
Sbjct: 1279 VCAVASNTARGFICRCPAGFEGATCENDARTCGSLRC-LNGGTCISGP-RSPTCL-CLGS 1335
Query: 284 TKGPQCD--KCEPLYVGDPRDN-GECVPCSE 311
GP+C P +P N G C P SE
Sbjct: 1336 FTGPECQFPASSPCVGSNPCYNQGTCEPTSE 1366
Score = 59 (25.8 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 24/102 (23%), Positives = 38/102 (37%)
Query: 32 IKLKTGSSCPLRCDQ--RTDCQD--CLTSSGG-----EGGWHECRWSSMLNECI-SPSYE 81
+K TG +C + D C CL G E G+ + ++EC SP +
Sbjct: 588 LKGTTGPNCEINLDDCASNPCDSGTCLDKIDGYECACEPGYTGSMCNVNIDECAGSPCHN 647
Query: 82 ALYCAGGVCGLVLGPHQAPQCPRSCSAYTQCST--CLRHAHC 121
C G+ G + P S +C++ C+ H C
Sbjct: 648 GGTCEDGIAGFTCRCPEGYHDPTCLSEVNECNSNPCI-HGAC 688
Score = 58 (25.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 25/95 (26%), Positives = 36/95 (37%)
Query: 36 TGSSCPLRCDQRTD--CQD---CLTSSGG-----EGGWHECRWSSMLNECISPSYEALYC 85
TGS C D+ + CQ+ C GG G+H S +NEC+S +
Sbjct: 1096 TGSYCEDEVDECSPNPCQNGATCTDYLGGFSCKCVAGYHGSNCSEEINECLSQPCQN--- 1152
Query: 86 AGGVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAH 120
GG C + ++ CPR C + H
Sbjct: 1153 -GGTCIDLTNTYKC-SCPRGTQG-VHCEINVDDCH 1184
Score = 47 (21.6 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 29/112 (25%), Positives = 40/112 (35%)
Query: 36 TGSSCPLRCDQ--RTDCQDCLTSSGGEGGWHECRWSSMLNE--CISPSYEALY--CAGGV 89
TGS C + D+ + C + T G G+ CR ++ C+S E C G
Sbjct: 629 TGSMCNVNIDECAGSPCHNGGTCEDGIAGF-TCRCPEGYHDPTCLSEVNECNSNPCIHGA 687
Query: 90 CGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHCGWCA---LQRDTTGGMGVCT 138
C L ++ C S T C C +D T G VCT
Sbjct: 688 CRDGLNGYKC-DCAPGWSG-TNCDINNNECESNPCVNGGTCKDMTSGY-VCT 736
Score = 41 (19.5 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 74 ECIS-PSYEALYC 85
+CI P YE +YC
Sbjct: 433 QCICMPGYEGVYC 445
>ZFIN|ZDB-GENE-080807-4 [details] [associations]
symbol:hspg2 "heparan sulfate proteoglycan 2"
species:7955 "Danio rerio" [GO:0007519 "skeletal muscle tissue
development" evidence=IMP] [GO:0001525 "angiogenesis" evidence=IMP]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068
PROSITE:PS50835 SMART:SM00181 SMART:SM00192 ZFIN:ZDB-GENE-080807-4
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0001525
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 InterPro:IPR002049
InterPro:IPR001791 InterPro:IPR000082 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 PROSITE:PS50024 GeneTree:ENSGT00530000063501
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR009030 SUPFAM:SSF57184
Pfam:PF02210 GO:GO:0007519 Pfam:PF12661 InterPro:IPR018031
InterPro:IPR000034 Pfam:PF00052 SMART:SM00281 PROSITE:PS51115
EMBL:CR936463 EMBL:CR855310 IPI:IPI00889358
Ensembl:ENSDART00000111029 Bgee:F1RCP6 Uniprot:F1RCP6
Length = 3422
Score = 136 (52.9 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 251 YVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDN--GECVP 308
Y+G+ C+ C CNGHA P CL C + T+G QC+KC+P + GDP +C P
Sbjct: 681 YLGI-CA-GCNCNGHASACDPVS-GHCLSCQHKTEGAQCEKCKPGFFGDPSRGQYDDCKP 737
Query: 309 C 309
C
Sbjct: 738 C 738
Score = 129 (50.5 bits), Expect = 8.5e-05, Sum P(4) = 8.5e-05
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 251 YVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNG--ECVP 308
Y+G +C C+CNGH+D P+ +C C ++TKG C++C + GDP +C P
Sbjct: 1474 YLG-HCE-PCECNGHSDTCHPET-GICTNCQHNTKGELCEQCVDGFFGDPTAGTPEDCQP 1530
Query: 309 CSEYCNG 315
C+ C G
Sbjct: 1531 CA--CPG 1535
Score = 60 (26.2 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 354 CMHCGNHTTGPKCEDCVEG 372
C +C ++T G CE CV+G
Sbjct: 1497 CTNCQHNTKGELCEQCVDG 1515
Score = 51 (23.0 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 18/48 (37%), Positives = 23/48 (47%)
Query: 182 CPPEN-ECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVP 228
C PE CL+D C P S QC + D C ++S+E G C P
Sbjct: 282 CAPEQFVCLSDRK-CIPASYQCDEEPD-----CA---DRSDEFG-CAP 319
Score = 48 (22.0 bits), Expect = 1.5e-05, Sum P(4) = 1.5e-05
Identities = 18/58 (31%), Positives = 23/58 (39%)
Query: 321 INASLASLPFS-PESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCED---CVEGKE 374
IN L +S ES S+ D+ P R C+H G + E C EG E
Sbjct: 3113 INGKKVDLSYSFTESRAISQCN---DDSPCDRRPCLHAGTCMATAEYEYQCFCAEGYE 3167
Score = 44 (20.5 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 13/34 (38%), Positives = 14/34 (41%)
Query: 19 EPRTVKTDANRTNIKLKTGSSCPLRCDQRTDCQD 52
EP K R +KL RCD DCQD
Sbjct: 240 EPNEFKCQNGRCALKL-------WRCDGDNDCQD 266
Score = 41 (19.5 bits), Expect = 2.0e-06, Sum P(4) = 2.0e-06
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 44 CDQRTDCQD 52
CD+R DC D
Sbjct: 158 CDKRPDCND 166
Score = 38 (18.4 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 353 RCMHCGNHTTGPKCEDCVEG 372
+C C +G C+DC G
Sbjct: 1447 QCQ-CPPGYSGLSCQDCASG 1465
Score = 37 (18.1 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 5/10 (50%), Positives = 7/10 (70%)
Query: 43 RCDQRTDCQD 52
+CD+ DC D
Sbjct: 301 QCDEEPDCAD 310
>UNIPROTKB|Q9Y6N6 [details] [associations]
symbol:LAMC3 "Laminin subunit gamma-3" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0000904
"cell morphogenesis involved in differentiation" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0014002
"astrocyte development" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=TAS] [GO:0005198 "structural molecule activity"
evidence=TAS] [GO:0016020 "membrane" evidence=TAS] [GO:0005576
"extracellular region" evidence=TAS]
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0016020
GO:GO:0005198 GO:GO:0007601 GO:GO:0005578 GO:GO:0007155
PROSITE:PS00022 GO:GO:0060041 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0005604
GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 eggNOG:NOG235720 HOGENOM:HOG000019301
HOVERGEN:HBG100808 EMBL:AF041835 EMBL:AL583807 EMBL:AL355872
EMBL:AB208887 IPI:IPI00914899 RefSeq:NP_006050.3 UniGene:Hs.201805
ProteinModelPortal:Q9Y6N6 SMR:Q9Y6N6 IntAct:Q9Y6N6
MINT:MINT-7034525 STRING:Q9Y6N6 DMDM:308153586 PaxDb:Q9Y6N6
PRIDE:Q9Y6N6 DNASU:10319 Ensembl:ENST00000361069 GeneID:10319
KEGG:hsa:10319 UCSC:uc004caa.1 CTD:10319 GeneCards:GC09P133884
H-InvDB:HIX0008477 HGNC:HGNC:6494 MIM:604349 MIM:614115
neXtProt:NX_Q9Y6N6 Orphanet:280640 PharmGKB:PA30282 KO:K06247
OrthoDB:EOG498TZW ChiTaRS:LAMC3 GenomeRNAi:10319 NextBio:39119
ArrayExpress:Q9Y6N6 Bgee:Q9Y6N6 CleanEx:HS_LAMC3
Genevestigator:Q9Y6N6 GermOnline:ENSG00000050555 Uniprot:Q9Y6N6
Length = 1575
Score = 148 (57.2 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 37/114 (32%), Positives = 49/114 (42%)
Query: 259 QCQCNGHADCAGPDKL-DVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHT 317
+C+CNGHA GPD + RC ++T G C++C P + P G E
Sbjct: 270 RCKCNGHASECGPDVAGQLACRCQHNTTGTDCERCLPFFQDRPWARGTAEAAHE------ 323
Query: 318 GLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCVE 371
C+ + + S E EL G RC HC +HT GP CE C E
Sbjct: 324 --CLPCNCSGR--SEECTFDRELFRSTGHG----GRCHHCRDHTAGPHCERCQE 369
Score = 126 (49.4 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 52/196 (26%), Positives = 72/196 (36%)
Query: 190 NDHHTCD-PQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVR---GVCSEPDKC 245
+D C P C + + E VC + G C VC G G+ P C
Sbjct: 750 DDCQPCPCPGQSACTTIPESREVVCTH-CPPGQRGRRC-EVCDDGFFGDPLGLFGHPQPC 807
Query: 246 QCDFGYVGVNCSIQCQCNGHAD--CAGP-DKLDV-CLRCHNHTKGPQCDKCEPLYVGD-- 299
QCQC+G+ D G D L CLRC ++T G C+ C+ + G
Sbjct: 808 H------------QCQCSGNVDPNAVGNCDPLSGHCLRCLHNTTGDHCEHCQEGFYGSAL 855
Query: 300 -PRDNGECVPCSEYCNGHTGL---C--INASLASLPFSPESGGTSELAAFLDEGPTTRAR 353
PR +C+PCS + G C + + LP + F D P R
Sbjct: 856 APRPADKCMPCSCHPQGSVSEQMPCDPVTGQCSCLPHVTARDCSRCYPGFFDLQPG-RG- 913
Query: 354 CMHCGNHTTGPKCEDC 369
C C H G + + C
Sbjct: 914 CRSCKCHPLGSQEDQC 929
Score = 42 (19.8 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 23/95 (24%), Positives = 35/95 (36%)
Query: 39 SCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQ 98
+C R ++ T ++ S+G G H CR + C E Y H
Sbjct: 328 NCSGRSEECTFDRELFRSTGHGGRCHHCRDHTAGPHC-ERCQENFY------------HW 374
Query: 99 APQCP-RSCSAYTQCSTCLRHAHCGWCALQRDTTG 132
P+ P + C + S L+ G CA + TG
Sbjct: 375 DPRMPCQPCDCQSAGSLHLQCDDTGTCACKPTVTG 409
>MGI|MGI:1344394 [details] [associations]
symbol:Lamc3 "laminin gamma 3" species:10090 "Mus musculus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=IGI] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005604 "basement membrane" evidence=IDA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007601 "visual perception"
evidence=IGI] [GO:0014002 "astrocyte development" evidence=IGI]
[GO:0060041 "retina development in camera-type eye" evidence=IGI]
MGI:MGI:1344394 GO:GO:0007601 GO:GO:0007155 PROSITE:PS00022
GO:GO:0060041 PROSITE:PS01186 EMBL:CH466542 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 eggNOG:NOG235720
GeneTree:ENSGT00690000102103 HOGENOM:HOG000019301
HOVERGEN:HBG100808 CTD:10319 KO:K06247 OrthoDB:EOG498TZW
EMBL:AF083372 EMBL:AL928893 EMBL:BX511243 EMBL:BC096366
EMBL:AF079520 IPI:IPI00756854 RefSeq:NP_035966.2 UniGene:Mm.302362
ProteinModelPortal:Q9R0B6 SMR:Q9R0B6 STRING:Q9R0B6 PaxDb:Q9R0B6
PRIDE:Q9R0B6 Ensembl:ENSMUST00000028187 GeneID:23928 KEGG:mmu:23928
OMA:QRGRRCE NextBio:303725 Bgee:Q9R0B6 CleanEx:MM_LAMC3
Genevestigator:Q9R0B6 GermOnline:ENSMUSG00000026840 Uniprot:Q9R0B6
Length = 1581
Score = 148 (57.2 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 38/118 (32%), Positives = 52/118 (44%)
Query: 259 QCQCNGHADCAGPDKL-DVCLRCHNHTKGPQCDKCEPLYVGDP------RDNGECVPCSE 311
+C+CNGHA P+ + RC ++T G C++C P + P D EC+PC+
Sbjct: 279 RCKCNGHASECEPNAAGQLACRCQHNTTGVDCERCLPFFQDRPWARGTAEDANECLPCN- 337
Query: 312 YCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDC 369
C+GH+ C F EL G C C +HTTGP CE C
Sbjct: 338 -CSGHSEECT--------FD------RELYRSTGHG----GHCQRCRDHTTGPHCERC 376
>UNIPROTKB|F5GXC9 [details] [associations]
symbol:LTBP4 "Latent-transforming growth factor
beta-binding protein 4" species:9606 "Homo sapiens" [GO:0005509
"calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
PROSITE:PS00010 Gene3D:3.90.290.10 InterPro:IPR017878 Pfam:PF00683
SUPFAM:SSF57581 PROSITE:PS51364 EMBL:AC010412 HGNC:HGNC:6717
ChiTaRS:LTBP4 IPI:IPI01018340 ProteinModelPortal:F5GXC9 SMR:F5GXC9
Ensembl:ENST00000545697 UCSC:uc002ook.1 ArrayExpress:F5GXC9
Bgee:F5GXC9 Uniprot:F5GXC9
Length = 899
Score = 145 (56.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 52/170 (30%), Positives = 66/170 (38%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG--CVRG 237
C NECL C P E C++ F C C GY G C+ V CS+ C G
Sbjct: 329 CADVNECLEGDF-CFPHGE-CLNTDGSFACTCAPGYRPGPRGASCLDVDECSEEDLCQSG 386
Query: 238 VCSEPD---KCQCDFGY-VGVNCSIQCQCNGHADCA--GPDKLDVCLRCHNHTKGPQCDK 291
+C+ D +C C G+ G + + C +C GP L RC N +C +
Sbjct: 387 ICTNTDGSFECICPPGHRAGPDLA---SCLDVDECRERGP-ALCGSQRCENSPGSYRCVR 442
Query: 292 -CEPLYVGDPR----DNGECVPCSEYCNGHTGLCINAS---LASLPFSPE 333
C+P Y P D EC C LC N L P SPE
Sbjct: 443 DCDPGYHAGPEGTCDDVNECETLQGVCGA--ALCENVEGSFLCVCPNSPE 490
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 41/152 (26%), Positives = 55/152 (36%)
Query: 186 NECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG---CVRGVCS 240
+EC + C P +C + A F C C G+ G C V C++ C G C
Sbjct: 165 DECAQEPPPCGPG--RCDNTAGSFHCACPAGFRSRGPGAPCQDVDECARSPPPCTYGRCE 222
Query: 241 EPD---KCQCDFGY----VGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCE 293
+ +C C G+ G C +C H C G + C N QC C
Sbjct: 223 NTEGSFQCVCPMGFQPNTAGSECEDVDECENHLACPGQE-------CVNSPGSFQCRTCP 275
Query: 294 P---LYVGDPRDNGECVPCSEYCNGHTGLCIN 322
L+ G D EC + C H G C N
Sbjct: 276 SGHHLHRGRCTDVDECSSGAPPCGPH-GHCTN 306
>MGI|MGI:99460 [details] [associations]
symbol:Notch3 "notch 3" species:10090 "Mus musculus"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005887 "integral
to plasma membrane" evidence=IC] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0007219 "Notch
signaling pathway" evidence=ISO;IC;IDA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IGI] [GO:0045596 "negative regulation of cell
differentiation" evidence=IMP] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IMP] [GO:0048661 "positive
regulation of smooth muscle cell proliferation" evidence=IDA]
[GO:0048663 "neuron fate commitment" evidence=IGI] [GO:0050793
"regulation of developmental process" evidence=IEA]
InterPro:IPR002110 InterPro:IPR000742 InterPro:IPR000800
InterPro:IPR001881 InterPro:IPR008297 InterPro:IPR010660
InterPro:IPR011656 InterPro:IPR018097 InterPro:IPR022331
Pfam:PF00008 Pfam:PF00023 Pfam:PF00066 Pfam:PF06816 Pfam:PF07645
Pfam:PF07684 PIRSF:PIRSF002279 PRINTS:PR01452 PRINTS:PR01986
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258
SMART:SM00004 SMART:SM00179 SMART:SM00181 SMART:SM00248
InterPro:IPR000152 MGI:MGI:99460 GO:GO:0005634 GO:GO:0005887
GO:GO:0006355 eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0048661 GO:GO:0030900
GO:GO:0045665 GO:GO:0007219 GO:GO:0005509 GO:GO:0006351
Reactome:REACT_115202 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 GO:GO:0042246 PROSITE:PS00010 GO:GO:0048663
GO:GO:0072104 Pfam:PF12661 GeneTree:ENSGT00700000104305
SUPFAM:SSF90193 HOGENOM:HOG000234369 HOVERGEN:HBG052650 KO:K02599
InterPro:IPR024600 Pfam:PF11936 CTD:4854 OMA:LTFTCHC
OrthoDB:EOG4C2H8K EMBL:X74760 IPI:IPI00620432 PIR:S45306
RefSeq:NP_032742.1 UniGene:Mm.439741 ProteinModelPortal:Q61982
SMR:Q61982 MINT:MINT-1955915 STRING:Q61982 PhosphoSite:Q61982
PaxDb:Q61982 PRIDE:Q61982 Ensembl:ENSMUST00000087723 GeneID:18131
KEGG:mmu:18131 InParanoid:Q61982 NextBio:293368 Bgee:Q61982
CleanEx:MM_NOTCH3 Genevestigator:Q61982
GermOnline:ENSMUSG00000038146 Uniprot:Q61982
Length = 2318
Score = 149 (57.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 95/376 (25%), Positives = 142/376 (37%)
Query: 31 NIKLKTGSSCPLRCDQRTDCQDCLTSSGGEGGWH-ECRWSSMLNECISPSYEALY--CAG 87
N+++ +S P C + C D GE G+H C S+ C+ ++ + C+
Sbjct: 656 NVEINECASSP--CGEGGSCVD------GENGFHCLCPPGSLPPLCLPANHPCAHKPCSH 707
Query: 88 GVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHCGWCALQRD---TTGGMGV-CTXXXXX 143
GVC G + C S +CS L C Q T+ G+G CT
Sbjct: 708 GVCHDAPGGFRCV-CEPGWSG-PRCSQSLAPDACESQPCQAGGTCTSDGIGFRCTCAPGF 765
Query: 144 XXXXXXXXXTC--DILFY----QTYPDQVIEVNNNDSFSWNYVKCPPE-NECLNDHHTCD 196
C + + ++ PD++ + W +C + +EC C
Sbjct: 766 QGHQCEVLSPCTPSLCEHGGHCESDPDRLTVCSCPPG--WQGPRCQQDVDECAGAS-PCG 822
Query: 197 PQSEQCVDLADGFECVCGRGYNK---SEEGGECVP-VCSQG--CVRGVCSEPDKCQCDFG 250
P C +L F C+C RGY ++ +C P C G C GV S C C G
Sbjct: 823 PHGT-CTNLPGNFRCICHRGYTGPFCDQDIDDCDPNPCLHGGSCQDGVGSF--SCSCLDG 879
Query: 251 YVGVNCSIQC-QCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGD--PRDNGECV 307
+ G C+ +C + C GP C +H C C P Y G D +C
Sbjct: 880 FAGPRCARDVDECLS-SPC-GPGT------CTDHVASFTC-ACPPGYGGFHCEIDLPDCS 930
Query: 308 PCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCG--NHT-TGP 364
P S + NG G C++ ++S G T + + P C+H G N T G
Sbjct: 931 PSSCF-NG--GTCVDG-VSSFSCLCRPGYTGTHCQY-EADPCFSRPCLHGGICNPTHPGF 985
Query: 365 KCEDCVEGKENRQSRN 380
+C C EG Q +N
Sbjct: 986 ECT-CREGFTGSQCQN 1000
Score = 136 (52.9 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 50/155 (32%), Positives = 61/155 (39%)
Query: 201 QCVDLADGFECVCGRGYNKS--EEG-GECVP-VCSQG-CVRGVCSEPDKCQCDFGYVGVN 255
+CVD DG+EC C G+ + E +C P C G CV G+ S C C GY G+
Sbjct: 522 KCVDQPDGYECRCAEGFEGTLCERNVDDCSPDPCHHGRCVDGIASF--SCACAPGYTGIR 579
Query: 256 CSIQC-QCNGHADCAGPDKLDVC----LRCHNHTKGPQC----DKC--EPLYVGDPRDNG 304
C Q +C G LD+ RC T G C D C P G RD
Sbjct: 580 CESQVDECRSQPCRYGGKCLDLVDKYLCRCPPGTTGVNCEVNIDDCASNPCTFGVCRDGI 639
Query: 305 ECVPCSEYCN-GHTGLCINASLASLPFSP-ESGGT 337
C C G TG N + SP GG+
Sbjct: 640 NRYDC--VCQPGFTGPLCNVEINECASSPCGEGGS 672
>ZFIN|ZDB-GENE-030131-7972 [details] [associations]
symbol:nell2a "NEL-like 2a" species:7955 "Danio
rerio" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR000742
InterPro:IPR001007 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00093 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS01208
PROSITE:PS50026 PROSITE:PS50184 SMART:SM00179 SMART:SM00181
SMART:SM00214 InterPro:IPR000152 ZFIN:ZDB-GENE-030131-7972
GO:GO:0005576 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 SMART:SM00210 HOVERGEN:HBG004805
EMBL:BC128854 IPI:IPI00829092 RefSeq:NP_001073544.1
UniGene:Dr.107080 UniGene:Dr.124568 ProteinModelPortal:A1A5Y0
GeneID:790930 KEGG:dre:790930 CTD:790930 NextBio:20930414
Uniprot:A1A5Y0
Length = 811
Score = 144 (55.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 32/96 (33%), Positives = 43/96 (44%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRG-VCS 240
C +EC + H CD ++ C + G C C GY S G C +C C+ G C+
Sbjct: 478 CTEHDECASGQHDCD-ENALCFNTVGGHSCSCKPGY--SGNGTVCRALCDGRCLNGGSCA 534
Query: 241 EPDKCQCDFGYVGVNCSI---QC-----QCNGHADC 268
P+ C C G+ G NC +C QC HA C
Sbjct: 535 SPNVCVCVQGFSGQNCETDIDECSEGLVQCAAHATC 570
>UNIPROTKB|F1PEI6 [details] [associations]
symbol:NELL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001007 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00093 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS01208 PROSITE:PS50026 PROSITE:PS50184 SMART:SM00179
SMART:SM00181 SMART:SM00214 InterPro:IPR000152 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 Pfam:PF02210 Pfam:PF12661 SMART:SM00210
GeneTree:ENSGT00700000104369 InterPro:IPR024731 Pfam:PF12947
OMA:GSHCEKD EMBL:AAEX03012997 EMBL:AAEX03012998 EMBL:AAEX03012999
EMBL:AAEX03013000 EMBL:AAEX03013001 Ensembl:ENSCAFT00000015919
Uniprot:F1PEI6
Length = 792
Score = 146 (56.5 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 53/187 (28%), Positives = 75/187 (40%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGC-VRGVCS 240
C +EC + H CD ++ C + G C C GY + G C C +GC G C
Sbjct: 456 CTEHDECGSGQHNCD-ENAICTNTVRGHSCTCKPGYVGN--GTICRAFCQEGCRYGGSCV 512
Query: 241 EPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKG---P---QCDKCEP 294
P+KC C G+ G +C +C + + CHNH++ P C+ C
Sbjct: 513 SPNKCVCPSGFTGSHCEKDID-----ECT-----EGIIECHNHSRCVNLPGWYHCE-CRS 561
Query: 295 LYVGDPRDN--GE-CVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTR 351
+ D + GE C+ E C T C N S A + + GG L GP+
Sbjct: 562 GFHDDGTYSLSGESCIDIDE-CALRTHTCWNDS-ACINLA---GGFDCLCP---SGPSCS 613
Query: 352 ARCMHCG 358
C H G
Sbjct: 614 GDCPHEG 620
Score = 41 (19.5 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 50 CQDCLTSSGGEGGWHECRWSSM--LNECISPSYEALYCAGGVC 90
C++C +GG ECR S LN C SP ++ AG C
Sbjct: 274 CRNCTC----KGGAVECRRMSCPPLN-C-SPDSLPVHIAGQCC 310
>UNIPROTKB|E9PTH8 [details] [associations]
symbol:Ltbp2 "Latent-transforming growth factor
beta-binding protein 2" species:10116 "Rattus norvegicus"
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 Pfam:PF07645
PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:68380 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 PROSITE:PS00010 Gene3D:3.90.290.10
InterPro:IPR017878 Pfam:PF00683 SUPFAM:SSF57581 PROSITE:PS51364
IPI:IPI00947893 Ensembl:ENSRNOT00000067906 ArrayExpress:E9PTH8
Uniprot:E9PTH8
Length = 1788
Score = 147 (56.8 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 63/197 (31%), Positives = 76/197 (38%)
Query: 195 CDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQ-G-CVRGVCSEPD---KCQC 247
C P + CV L +G+ CVC GY C V C Q G C G CS + C+C
Sbjct: 866 CGPGT--CVKLPNGYRCVCSPGYQLHPSQDYCTDVDECEQPGVCSGGRCSNTEGSYHCEC 923
Query: 248 DFGYVGV---NCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNG 304
D GYV V +C +C C PD RC N C CE Y+G +G
Sbjct: 924 DQGYVMVRRGHCQDINECRHPGTC--PDG-----RCVNSPGSYTCLACEEGYIGQ---SG 973
Query: 305 ECVPCSEYCN----GHTGLCINASLASLPFSPESGG--TSELAAFLD-EGPTTRARCMH- 356
CV +E H G CIN S S E G T + D + +RA C
Sbjct: 974 NCVDMNECLTPGICAH-GRCINME-GSFRCSCEPGYELTPDKKGCRDVDECASRASCPTG 1031
Query: 357 -CGNHTTGPKCEDCVEG 372
C N C C G
Sbjct: 1032 LCLNTEGSFTCSACQSG 1048
Score = 138 (53.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 43/157 (27%), Positives = 66/157 (42%)
Query: 178 NYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CS--QG 233
N C +EC+ + H C P E C++ F C+C G+ +E G C V C+ +
Sbjct: 1137 NGTVCEDVDECVGEEH-CAPHGE-CLNSPGSFFCLCAPGFASAEGGTRCQDVDECATTEP 1194
Query: 234 CVRGVCSEPD---KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCD 290
C+ G C + C C+ G+ S +C + G D + RC N +C
Sbjct: 1195 CLGGHCVNTEGSFNCLCETGFQPAPDSGECVDIDECEDQG-DPVCGDWRCENSPGSYRCV 1253
Query: 291 K-CEPLYVGDPRDNGECVPCSEYCN----GHTGLCIN 322
C+P + P G+C+ E N G+ G C N
Sbjct: 1254 LGCQPGFYVAP--TGDCIDIDECANDTVCGNHGFCDN 1288
>RGD|620761 [details] [associations]
symbol:Notch3 "notch 3" species:10116 "Rattus norvegicus"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0007219 "Notch signaling pathway"
evidence=IEA;ISO;IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0030154 "cell differentiation" evidence=IEA;TAS] [GO:0030900
"forebrain development" evidence=ISO] [GO:0042246 "tissue
regeneration" evidence=IEP] [GO:0045596 "negative regulation of
cell differentiation" evidence=ISO] [GO:0045665 "negative
regulation of neuron differentiation" evidence=ISO] [GO:0048661
"positive regulation of smooth muscle cell proliferation"
evidence=ISO] [GO:0048663 "neuron fate commitment" evidence=ISO]
[GO:0050793 "regulation of developmental process" evidence=IEA]
InterPro:IPR002110 InterPro:IPR000742 InterPro:IPR000800
InterPro:IPR001881 InterPro:IPR008297 InterPro:IPR010660
InterPro:IPR011656 InterPro:IPR018097 InterPro:IPR022331
Pfam:PF00008 Pfam:PF00066 Pfam:PF06816 Pfam:PF07645 Pfam:PF07684
PIRSF:PIRSF002279 PRINTS:PR01452 PRINTS:PR01986 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004
SMART:SM00179 SMART:SM00181 SMART:SM00248 InterPro:IPR000152
RGD:620761 GO:GO:0016021 GO:GO:0005886 GO:GO:0005634 GO:GO:0030154
GO:GO:0006355 eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0048661
GO:GO:0030900 GO:GO:0045665 GO:GO:0007219 GO:GO:0005509
GO:GO:0006351 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
GO:GO:0042246 PROSITE:PS00010 GO:GO:0048663 GO:GO:0072104
Pfam:PF12661 SUPFAM:SSF90193 HOGENOM:HOG000234369
HOVERGEN:HBG052650 KO:K02599 InterPro:IPR024600 Pfam:PF11936
CTD:4854 OrthoDB:EOG4C2H8K EMBL:AF164486 IPI:IPI00206814
RefSeq:NP_064472.2 UniGene:Rn.228683 ProteinModelPortal:Q9R172
SMR:Q9R172 STRING:Q9R172 PRIDE:Q9R172 GeneID:56761 KEGG:rno:56761
UCSC:RGD:620761 InParanoid:Q9R172 NextBio:611142
ArrayExpress:Q9R172 Genevestigator:Q9R172
GermOnline:ENSRNOG00000004346 Uniprot:Q9R172
Length = 2319
Score = 148 (57.2 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 96/376 (25%), Positives = 141/376 (37%)
Query: 31 NIKLKTGSSCPLRCDQRTDCQDCLTSSGGEGGWH-ECRWSSMLNECISPSYEALY--CAG 87
N+++ +S P C + C D GE G+H C S+ C+ ++ + C+
Sbjct: 657 NVEINECASSP--CGEGGSCVD------GENGFHCLCPPGSLPPLCLPANHPCAHKPCSH 708
Query: 88 GVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHCGWCALQRD---TTGGMGV-CTXXXXX 143
GVC G Q C S +CS L C Q T+ G+G CT
Sbjct: 709 GVCHDAPGGFQCV-CDPGWSG-PRCSQSLAPDACESQPCQAGGTCTSDGIGFHCTCAPGF 766
Query: 144 XXXXXXXXXTC--DILFY----QTYPDQVIEVNNNDSFSWNYVKCPPE-NECLNDHHTCD 196
C + + ++ PDQ+ + W +C + +EC C
Sbjct: 767 QGHQCEVLSPCTPSLCEHGGHCESDPDQLTVCSCPPG--WQGPRCQQDVDECAGAS-PCG 823
Query: 197 PQSEQCVDLADGFECVCGRGYNK---SEEGGECVP-VCSQG--CVRGVCSEPDKCQCDFG 250
P C +L F C+C GY ++ +C P C G C GV S C C G
Sbjct: 824 PHGT-CTNLPGSFRCICHGGYTGPFCDQDIDDCDPNPCLNGGSCQDGVGSF--SCSCLSG 880
Query: 251 YVGVNCSIQC-QCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGD--PRDNGECV 307
+ G C+ +C + C GP C +H C C P Y G D +C
Sbjct: 881 FAGPRCARDVDECLS-SPC-GPGT------CTDHVASFTCT-CPPGYGGFHCETDLLDCS 931
Query: 308 PCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCG--NHT-TGP 364
P S + NG G C++ + S G T + + P C+H G N T +G
Sbjct: 932 PSSCF-NG--GTCVDG-VNSFSCLCRPGYTGTHCQYKVD-PCFSRPCLHGGICNPTHSGF 986
Query: 365 KCEDCVEGKENRQSRN 380
+C C EG Q +N
Sbjct: 987 ECT-CREGFTGNQCQN 1001
Score = 136 (52.9 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 50/155 (32%), Positives = 61/155 (39%)
Query: 201 QCVDLADGFECVCGRGYNKS--EEG-GECVP-VCSQG-CVRGVCSEPDKCQCDFGYVGVN 255
+CVD DG+EC C G+ + E +C P C G CV G+ S C C GY G+
Sbjct: 523 KCVDQPDGYECRCAEGFEGTLCERNVDDCSPDPCHHGRCVDGIASF--SCACAPGYTGIR 580
Query: 256 CSIQC-QCNGHADCAGPDKLDVC----LRCHNHTKGPQC----DKC--EPLYVGDPRDNG 304
C Q +C G LD+ RC T G C D C P G RD
Sbjct: 581 CESQVDECRSQPCRYGGKCLDLVDKYLCRCPPGTTGVNCEVNIDDCASNPCTFGVCRDGI 640
Query: 305 ECVPCSEYCN-GHTGLCINASLASLPFSP-ESGGT 337
C C G TG N + SP GG+
Sbjct: 641 NRYDC--VCQPGFTGPLCNVEINECASSPCGEGGS 673
>UNIPROTKB|Q9R172 [details] [associations]
symbol:Notch3 "Neurogenic locus notch homolog protein 3"
species:10116 "Rattus norvegicus" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0050793 "regulation of developmental process"
evidence=IEA] InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
InterPro:IPR022331 Pfam:PF00008 Pfam:PF00066 Pfam:PF06816
Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279 PRINTS:PR01452
PRINTS:PR01986 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088
PROSITE:PS50258 SMART:SM00004 SMART:SM00179 SMART:SM00181
SMART:SM00248 InterPro:IPR000152 RGD:620761 GO:GO:0016021
GO:GO:0005886 GO:GO:0005634 GO:GO:0030154 GO:GO:0006355
eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0048661 GO:GO:0030900
GO:GO:0045665 GO:GO:0007219 GO:GO:0005509 GO:GO:0006351
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186 GO:GO:0042246
PROSITE:PS00010 GO:GO:0048663 GO:GO:0072104 Pfam:PF12661
SUPFAM:SSF90193 HOGENOM:HOG000234369 HOVERGEN:HBG052650 KO:K02599
InterPro:IPR024600 Pfam:PF11936 CTD:4854 OrthoDB:EOG4C2H8K
EMBL:AF164486 IPI:IPI00206814 RefSeq:NP_064472.2 UniGene:Rn.228683
ProteinModelPortal:Q9R172 SMR:Q9R172 STRING:Q9R172 PRIDE:Q9R172
GeneID:56761 KEGG:rno:56761 UCSC:RGD:620761 InParanoid:Q9R172
NextBio:611142 ArrayExpress:Q9R172 Genevestigator:Q9R172
GermOnline:ENSRNOG00000004346 Uniprot:Q9R172
Length = 2319
Score = 148 (57.2 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 96/376 (25%), Positives = 141/376 (37%)
Query: 31 NIKLKTGSSCPLRCDQRTDCQDCLTSSGGEGGWH-ECRWSSMLNECISPSYEALY--CAG 87
N+++ +S P C + C D GE G+H C S+ C+ ++ + C+
Sbjct: 657 NVEINECASSP--CGEGGSCVD------GENGFHCLCPPGSLPPLCLPANHPCAHKPCSH 708
Query: 88 GVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHCGWCALQRD---TTGGMGV-CTXXXXX 143
GVC G Q C S +CS L C Q T+ G+G CT
Sbjct: 709 GVCHDAPGGFQCV-CDPGWSG-PRCSQSLAPDACESQPCQAGGTCTSDGIGFHCTCAPGF 766
Query: 144 XXXXXXXXXTC--DILFY----QTYPDQVIEVNNNDSFSWNYVKCPPE-NECLNDHHTCD 196
C + + ++ PDQ+ + W +C + +EC C
Sbjct: 767 QGHQCEVLSPCTPSLCEHGGHCESDPDQLTVCSCPPG--WQGPRCQQDVDECAGAS-PCG 823
Query: 197 PQSEQCVDLADGFECVCGRGYNK---SEEGGECVP-VCSQG--CVRGVCSEPDKCQCDFG 250
P C +L F C+C GY ++ +C P C G C GV S C C G
Sbjct: 824 PHGT-CTNLPGSFRCICHGGYTGPFCDQDIDDCDPNPCLNGGSCQDGVGSF--SCSCLSG 880
Query: 251 YVGVNCSIQC-QCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGD--PRDNGECV 307
+ G C+ +C + C GP C +H C C P Y G D +C
Sbjct: 881 FAGPRCARDVDECLS-SPC-GPGT------CTDHVASFTCT-CPPGYGGFHCETDLLDCS 931
Query: 308 PCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCG--NHT-TGP 364
P S + NG G C++ + S G T + + P C+H G N T +G
Sbjct: 932 PSSCF-NG--GTCVDG-VNSFSCLCRPGYTGTHCQYKVD-PCFSRPCLHGGICNPTHSGF 986
Query: 365 KCEDCVEGKENRQSRN 380
+C C EG Q +N
Sbjct: 987 ECT-CREGFTGNQCQN 1001
Score = 136 (52.9 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 50/155 (32%), Positives = 61/155 (39%)
Query: 201 QCVDLADGFECVCGRGYNKS--EEG-GECVP-VCSQG-CVRGVCSEPDKCQCDFGYVGVN 255
+CVD DG+EC C G+ + E +C P C G CV G+ S C C GY G+
Sbjct: 523 KCVDQPDGYECRCAEGFEGTLCERNVDDCSPDPCHHGRCVDGIASF--SCACAPGYTGIR 580
Query: 256 CSIQC-QCNGHADCAGPDKLDVC----LRCHNHTKGPQC----DKC--EPLYVGDPRDNG 304
C Q +C G LD+ RC T G C D C P G RD
Sbjct: 581 CESQVDECRSQPCRYGGKCLDLVDKYLCRCPPGTTGVNCEVNIDDCASNPCTFGVCRDGI 640
Query: 305 ECVPCSEYCN-GHTGLCINASLASLPFSP-ESGGT 337
C C G TG N + SP GG+
Sbjct: 641 NRYDC--VCQPGFTGPLCNVEINECASSPCGEGGS 673
>UNIPROTKB|G3N0E7 [details] [associations]
symbol:NTN3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005794
GO:GO:0005576 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 CTD:4917 KO:K06844 OMA:TASPLCW
GeneTree:ENSGT00700000104042 EMBL:DAAA02057314
RefSeq:NP_001193834.1 UniGene:Bt.111865 Ensembl:ENSBTAT00000063051
GeneID:787961 KEGG:bta:787961 NextBio:20928798 Uniprot:G3N0E7
Length = 580
Score = 141 (54.7 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 39/122 (31%), Positives = 53/122 (43%)
Query: 259 QCQCNGHAD-CAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDP------RDNGECVPCSE 311
+C+CNGHA C + + C + T+GP C +C+P Y P R+ C+ CS
Sbjct: 254 RCKCNGHASRCLLDPQGHLTCDCRHGTEGPDCSRCKPFYCDRPWQRATAREAHACLACS- 312
Query: 312 YCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCV 370
CNGH C N L L SGG C++C ++T G C C
Sbjct: 313 -CNGHARRCRFNMELYRLS-GRRSGGV----------------CLNCRHNTAGRHCHYCR 354
Query: 371 EG 372
EG
Sbjct: 355 EG 356
>MGI|MGI:1341188 [details] [associations]
symbol:Ntn3 "netrin 3" species:10090 "Mus musculus"
[GO:0005102 "receptor binding" evidence=IDA;IPI] [GO:0005576
"extracellular region" evidence=IDA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISA] [GO:0007409 "axonogenesis"
evidence=TAS] [GO:0007520 "myoblast fusion" evidence=ISA]
InterPro:IPR001134 PROSITE:PS50189 MGI:MGI:1341188 GO:GO:0005794
GO:GO:0005576 GO:GO:0006355 GO:GO:0005578 GO:GO:0005102
InterPro:IPR013032 PROSITE:PS00022 Reactome:REACT_127416
GO:GO:0007409 PROSITE:PS01186 GO:GO:0007520 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HOVERGEN:HBG006464 eggNOG:NOG244580
HOGENOM:HOG000286017 OrthoDB:EOG4VHK67 CTD:4917 KO:K06844
OMA:TASPLCW EMBL:AF152418 EMBL:AK031199 EMBL:AF149094 EMBL:AF128866
IPI:IPI00471207 RefSeq:NP_035077.1 UniGene:Mm.259542
ProteinModelPortal:Q9R1A3 SMR:Q9R1A3 STRING:Q9R1A3
PhosphoSite:Q9R1A3 PRIDE:Q9R1A3 Ensembl:ENSMUST00000024931
GeneID:18209 KEGG:mmu:18209 GeneTree:ENSGT00700000104042
InParanoid:Q9R1A3 NextBio:293594 Bgee:Q9R1A3 Genevestigator:Q9R1A3
GermOnline:ENSMUSG00000036473 Uniprot:Q9R1A3
Length = 580
Score = 141 (54.7 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 40/122 (32%), Positives = 53/122 (43%)
Query: 259 QCQCNGHAD-CAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDP--RDNGE----CVPCSE 311
+C+CNGHA C + C + T+GP C +C+P Y P R G+ C+ CS
Sbjct: 254 RCKCNGHASRCLLDTHGHLVCDCQHGTEGPDCSRCKPFYCDRPWQRATGQEAHACLACS- 312
Query: 312 YCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCV 370
CNGH C N L L SGG C++C ++T G C C
Sbjct: 313 -CNGHARRCRFNMELYRLS-GRRSGGV----------------CLNCRHNTAGRHCHYCR 354
Query: 371 EG 372
EG
Sbjct: 355 EG 356
>MGI|MGI:96257 [details] [associations]
symbol:Hspg2 "perlecan (heparan sulfate proteoglycan 2)"
species:10090 "Mus musculus" [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IMP]
[GO:0002062 "chondrocyte differentiation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IDA] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005605 "basal lamina" evidence=IDA] [GO:0005615 "extracellular
space" evidence=ISO] [GO:0007420 "brain development" evidence=IMP]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008104
"protein localization" evidence=IMP] [GO:0030198 "extracellular
matrix organization" evidence=IMP] [GO:0031012 "extracellular
matrix" evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IMP]
[GO:0048738 "cardiac muscle tissue development" evidence=IMP]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=IMP] [GO:0070062 "extracellular vesicular
exosome" evidence=ISO] Reactome:REACT_112621 InterPro:IPR000742
InterPro:IPR002172 InterPro:IPR007110 Pfam:PF00008 Pfam:PF00057
PROSITE:PS50026 PROSITE:PS50068 PROSITE:PS50835 SMART:SM00181
SMART:SM00192 MGI:MGI:96257 GO:GO:0008104 GO:GO:0007420
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0030198 GO:GO:0001525 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0048738 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005605 PROSITE:PS01186
Reactome:REACT_118324 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 InterPro:IPR002049
InterPro:IPR001791 InterPro:IPR000082 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 SMART:SM00200 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024 GO:GO:0005796
InterPro:IPR013098 Pfam:PF07679 GO:GO:0048704 GO:GO:0002062
GO:GO:0001958 Pfam:PF02210 GO:GO:0060351 InterPro:IPR018031
InterPro:IPR000034 Pfam:PF00052 SMART:SM00281 PROSITE:PS51115
PDB:1GL4 PDBsum:1GL4 CTD:3339 eggNOG:NOG258321 HOGENOM:HOG000049276
HOVERGEN:HBG008174 KO:K06255 EMBL:M77174 EMBL:J04054 EMBL:J04055
IPI:IPI00113824 PIR:S18252 RefSeq:NP_032331.2 UniGene:Mm.273662
ProteinModelPortal:Q05793 SMR:Q05793 IntAct:Q05793 MINT:MINT-215413
STRING:Q05793 PhosphoSite:Q05793 PaxDb:Q05793 PRIDE:Q05793
GeneID:15530 KEGG:mmu:15530 EvolutionaryTrace:Q05793 NextBio:288458
CleanEx:MM_HSPG2 Genevestigator:Q05793
GermOnline:ENSMUSG00000028763 Uniprot:Q05793
Length = 3707
Score = 140 (54.3 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 35/106 (33%), Positives = 51/106 (48%)
Query: 216 GYNKSEEGGECVPVCSQGCVRGVCSEPDKCQ-CDFGYVGVNCSI------QCQCNGHADC 268
G + + E +C C G RG P CQ CD GY V + +C C+GH++
Sbjct: 1116 GQDSAREVEQCT--CPPG-YRG----PS-CQDCDTGYTRVPSGLYLGTCERCNCHGHSET 1167
Query: 269 AGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNG--ECVPCSEY 312
P+ C C +HT+G C++C+P Y GD + +C PC Y
Sbjct: 1168 CEPET-GACQSCQHHTEGASCEQCQPGYYGDAQRGTPQDCQPCPCY 1212
Score = 136 (52.9 bits), Expect = 1.7e-06, Sum P(4) = 1.7e-06
Identities = 28/61 (45%), Positives = 34/61 (55%)
Query: 251 YVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGE--CVP 308
Y+G CS C CNGHA P CL C ++T+GPQCDKC+P + GD C P
Sbjct: 757 YLGT-CS-GCNCNGHASSCDP-VYGHCLNCQHNTEGPQCDKCKPGFFGDATKATATACRP 813
Query: 309 C 309
C
Sbjct: 814 C 814
Score = 59 (25.8 bits), Expect = 1.7e-06, Sum P(4) = 1.7e-06
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 179 YVKCPPENECLNDHHTCDPQSEQCVDLADGFECV 212
+ +C N C+ CD +S+ C D +D F C+
Sbjct: 372 HFQCVSTNRCIPASFHCDEESD-CPDRSDEFGCM 404
Score = 54 (24.1 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFEC 211
C NEC+ + CD + + C D++D C
Sbjct: 206 CHSYNECVALEYRCDRRPD-CRDMSDELNC 234
Score = 48 (22.0 bits), Expect = 1.7e-06, Sum P(4) = 1.7e-06
Identities = 18/61 (29%), Positives = 21/61 (34%)
Query: 315 GHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMH---CGNHTTGPKCEDCVE 371
G L I AS P G S A + AR + C GP C+DC
Sbjct: 1083 GIDALLIQASYTQQPAESRLSGISMDVAVPENTGQDSAREVEQCTCPPGYRGPSCQDCDT 1142
Query: 372 G 372
G
Sbjct: 1143 G 1143
Score = 47 (21.6 bits), Expect = 1.7e-06, Sum P(4) = 1.7e-06
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 43 RCDQRTDCQD 52
RCD+R DC+D
Sbjct: 218 RCDRRPDCRD 227
Score = 47 (21.6 bits), Expect = 7.8e-05, Sum P(3) = 7.8e-05
Identities = 14/40 (35%), Positives = 18/40 (45%)
Query: 44 CDQRTDCQDCLTSSGGE--GGWH-ECRWSSMLNECISPSY 80
C+ RTD +C GE G H +C N CI S+
Sbjct: 350 CEDRTDEANCSVKQPGEVCGPTHFQC---VSTNRCIPASF 386
Score = 38 (18.4 bits), Expect = 0.00060, Sum P(3) = 0.00060
Identities = 5/9 (55%), Positives = 7/9 (77%)
Query: 44 CDQRTDCQD 52
CD+ +DC D
Sbjct: 388 CDEESDCPD 396
>UNIPROTKB|P22105 [details] [associations]
symbol:TNXB "Tenascin-X" species:9606 "Homo sapiens"
[GO:0005518 "collagen binding" evidence=IEA] [GO:0006631 "fatty
acid metabolic process" evidence=IEA] [GO:0006641 "triglyceride
metabolic process" evidence=IEA] [GO:0007160 "cell-matrix adhesion"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0030199 "collagen fibril organization" evidence=IEA]
[GO:0043206 "extracellular fibril organization" evidence=IEA]
[GO:0043506 "regulation of JUN kinase activity" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=NAS]
[GO:0048251 "elastic fiber assembly" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0005583 "fibrillar collagen"
evidence=IDA] [GO:0007155 "cell adhesion" evidence=ISS] [GO:0008201
"heparin binding" evidence=ISS] [GO:0032963 "collagen metabolic
process" evidence=IMP] [GO:0030036 "actin cytoskeleton
organization" evidence=ISS] [GO:0005178 "integrin binding"
evidence=ISS] [GO:0005615 "extracellular space" evidence=IDA]
[GO:0031012 "extracellular matrix" evidence=ISS;IDA]
InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50026
PROSITE:PS50853 SMART:SM00060 SMART:SM00181 INTERPRO:IPR002181
INTERPRO:IPR020837 GO:GO:0007165 GO:GO:0005615 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:CH471081 GO:GO:0030036 SUPFAM:SSF49265
GO:GO:0005578 GO:GO:0030199 GO:GO:0008201 GO:GO:0007155
GO:GO:0006631 GO:GO:0005622 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0006641 GO:GO:0005178 GO:GO:0016337 PROSITE:PS01186
GO:GO:0007160 Gene3D:3.90.215.10 Gene3D:4.10.530.10
InterPro:IPR014716 InterPro:IPR014715 Pfam:PF00147 SMART:SM00186
SUPFAM:SSF56496 PROSITE:PS00514 PROSITE:PS51406 EMBL:U89337
EMBL:AL049547 EMBL:AL662828 EMBL:AL662884 EMBL:U52696
GermOnline:ENSG00000168477 GO:GO:0048251 GO:GO:0043206
GO:GO:0043506 Pfam:PF12661 EMBL:AF019413 EMBL:AL662849
EMBL:AL645922 MIM:130020 Orphanet:285 GO:GO:0032963 KO:K06252
MIM:600985 EMBL:U24488 EMBL:AL772248 EMBL:BC033740 EMBL:BC125114
EMBL:BC125115 EMBL:BC130037 EMBL:X71923 EMBL:Y13782 EMBL:Y13783
EMBL:AB209012 EMBL:M25813 IPI:IPI00025276 IPI:IPI00218639
IPI:IPI00895929 PIR:A40701 PIR:A42175 PIR:B42175 PIR:D42175
RefSeq:NP_061978.6 RefSeq:NP_115859.2 UniGene:Hs.485104 PDB:2CUH
PDB:2CUI PDB:2CUM PDBsum:2CUH PDBsum:2CUI PDBsum:2CUM
ProteinModelPortal:P22105 SMR:P22105 IntAct:P22105
PhosphoSite:P22105 DMDM:290457668 PRIDE:P22105 DNASU:7148
Ensembl:ENST00000375247 Ensembl:ENST00000451343
Ensembl:ENST00000546684 Ensembl:ENST00000550539 GeneID:7148
KEGG:hsa:7148 UCSC:uc003nzg.1 UCSC:uc003nzl.2 CTD:7148
GeneCards:GC06M032008 H-InvDB:HIX0165968 H-InvDB:HIX0207682
HGNC:HGNC:11976 HPA:CAB005373 MIM:606408 neXtProt:NX_P22105
Orphanet:230839 PharmGKB:PA36662 HOVERGEN:HBG006855
InParanoid:P22105 ChiTaRS:TNXB EvolutionaryTrace:P22105
GenomeRNAi:7148 NextBio:27974 Bgee:P22105 Genevestigator:P22105
Uniprot:P22105
Length = 4289
Score = 134 (52.2 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 49/139 (35%), Positives = 60/139 (43%)
Query: 187 ECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGEC-VPVCSQGCV-RGVCSEPDK 244
+C ND C Q C DG C+C GY SE+ C + C C RG C E +
Sbjct: 589 QCPND---CS-QHGVC---QDGV-CICWEGY-VSED---CSIRTCPSNCHGRGRCEE-GR 635
Query: 245 CQCDFGYVGVNCSIQCQCNGHADCAGPDKL--DVCLRCHNHTKGPQCDKCEPLYVGDPRD 302
C CD GY G C+ + C ADC G + VCL CH G C + EP P
Sbjct: 636 CLCDPGYTGPTCATR-MCP--ADCRGRGRCVQGVCL-CHVGYGGEDCGQEEPPASACP-- 689
Query: 303 NGECVPCSEYCNGHTGLCI 321
G C P E C +C+
Sbjct: 690 -GGCGP-RELCRAGQCVCV 706
Score = 118 (46.6 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 61/215 (28%), Positives = 81/215 (37%)
Query: 182 CPPENECLNDHHTCDP--QSEQCV------DLADGFECVCGR-----GYNKSEEGGEC-V 227
C C + CDP E C D +G CV GR GY G +C
Sbjct: 315 CSQRGRCKDGRCVCDPGYTGEDCGTRSCPWDCGEGGRCVDGRCVCWPGYT----GEDCST 370
Query: 228 PVCSQGCV-RGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKG 286
C + C RG C E +C CD GY G +C ++ C G + G + C+ +T G
Sbjct: 371 RTCPRDCRGRGRC-EDGECICDTGYSGDDCGVR-SCPGDCNQRGRCEDGRCVCWPGYT-G 427
Query: 287 PQCDK--CEPLYVGDPR-DNGECVPCSEYCN-GHTGLCINASLASLPFSPESGGTSELAA 342
C C G R +NG CV CN G++G + + S P G E
Sbjct: 428 TDCGSRACPRDCRGRGRCENGVCV-----CNAGYSGE--DCGVRSCPGDCRGRGRCESGR 480
Query: 343 FLD-EGPTTRARCMHCGNHTTGPKCED---CVEGK 373
+ G T R CG C CV+G+
Sbjct: 481 CMCWPGYTGR----DCGTRACPGDCRGRGRCVDGR 511
Score = 69 (29.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 26/83 (31%), Positives = 30/83 (36%)
Query: 39 SCPLRCDQRTDCQD--CLTSSG--GEG-GWHECRWSSMLNECISPSYEALYCAGGVC--- 90
SCP C QR C+D C+ G GE G C W +C E C G C
Sbjct: 310 SCPRGCSQRGRCKDGRCVCDPGYTGEDCGTRSCPW-----DC----GEGGRCVDGRCVCW 360
Query: 91 -GLVLGPHQAPQCPRSCSAYTQC 112
G CPR C +C
Sbjct: 361 PGYTGEDCSTRTCPRDCRGRGRC 383
Score = 69 (29.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 25/80 (31%), Positives = 29/80 (36%)
Query: 39 SCPLRCDQRTDCQD--CLTSSGGEG---GWHEC-RWSSMLNECISPSYEALYCAGGVCGL 92
SCP C QR C+ C+ G G G C R S C + C G G
Sbjct: 248 SCPRGCSQRGRCEGGRCVCDPGYTGDDCGMRSCPRGCSQRGRCENGR---CVCNPGYTGE 304
Query: 93 VLGPHQAPQCPRSCSAYTQC 112
G CPR CS +C
Sbjct: 305 DCGVRS---CPRGCSQRGRC 321
Score = 60 (26.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 22/71 (30%), Positives = 29/71 (40%)
Query: 39 SCPLRCDQRTDCQD--CLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGP 96
SCP C+QR C+D C+ G G +C + +C C GVC G
Sbjct: 403 SCPGDCNQRGRCEDGRCVCWPGYTGT--DCGSRACPRDCRGRGR----CENGVCVCNAG- 455
Query: 97 HQAPQCP-RSC 106
+ C RSC
Sbjct: 456 YSGEDCGVRSC 466
Score = 60 (26.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 24/88 (27%), Positives = 33/88 (37%)
Query: 39 SCPLRCDQRTDCQD--CLTSSGGEGGWHECRWSSMLNECISPSY-E--ALYCAGGVCGLV 93
+CP C R C+D C+ +G G +C S +C E C G G
Sbjct: 372 TCPRDCRGRGRCEDGECICDTGYSGD--DCGVRSCPGDCNQRGRCEDGRCVCWPGYTGTD 429
Query: 94 LGPHQAPQCPRSCSAYTQCST--CLRHA 119
G CPR C +C C+ +A
Sbjct: 430 CGSRA---CPRDCRGRGRCENGVCVCNA 454
Score = 58 (25.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 24/80 (30%), Positives = 29/80 (36%)
Query: 39 SCPLRCDQRTDCQD--CLTSSG--GEG-GWHEC-RWSSMLNECISPSYEALYCAGGVCGL 92
SCP C QR C++ C+ + G GE G C R S C C G G
Sbjct: 279 SCPRGCSQRGRCENGRCVCNPGYTGEDCGVRSCPRGCSQRGRCKDGR---CVCDPGYTGE 335
Query: 93 VLGPHQAPQCPRSCSAYTQC 112
G CP C +C
Sbjct: 336 DCGTRS---CPWDCGEGGRC 352
Score = 50 (22.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 22/82 (26%), Positives = 32/82 (39%)
Query: 37 GS-SCPLRCDQRTDCQD--CLTSSGGEGGWHECRWSSMLNECISPSY-EA--LYCAGGVC 90
GS +CP C R C++ C+ ++G G +C S +C E+ C G
Sbjct: 431 GSRACPRDCRGRGRCENGVCVCNAGYSG--EDCGVRSCPGDCRGRGRCESGRCMCWPGYT 488
Query: 91 GLVLGPHQAPQCPRSCSAYTQC 112
G G CP C +C
Sbjct: 489 GRDCGTRA---CPGDCRGRGRC 507
>UNIPROTKB|E1BGE0 [details] [associations]
symbol:E1BGE0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR011489
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
GeneTree:ENSGT00690000101691 OMA:QGAACDP EMBL:DAAA02043188
EMBL:DAAA02043189 EMBL:DAAA02043190 IPI:IPI00703880
Ensembl:ENSBTAT00000027771 Uniprot:E1BGE0
Length = 1572
Score = 132 (51.5 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 61/224 (27%), Positives = 85/224 (37%)
Query: 177 WNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECV-CGRGYNKSEEGGECVPVCS---- 231
W C + C ND C P + +C A G+ + C R + G +C C+
Sbjct: 822 WFGPGCQTQCSCANDG-LCHPVTGRC-SCAPGWTGLSCQRACDSGHWGPDCSFTCNCSAG 879
Query: 232 -QGC--VRGVC-SEPD----KCQ--CDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCH 281
GC V G+C E +C+ C GY G C QCQC A C D + C
Sbjct: 880 HGGCDAVSGLCVCEAGYVGPRCEQRCPQGYFGPGCGRQCQCEHGAAC---DHVSGACTCP 936
Query: 282 NHTKGPQCDK-CEPLYVGDPRDNGECVPCSEY--CNGHTGLCINASLASLPFSPES---- 334
+G C++ C + G D G CS C+ +G C+ S P ++
Sbjct: 937 AGWRGTFCERACPAGFFGV--DCGHACDCSAGVPCDPVSGSCLCPSGRQGPRCAQTCPAH 994
Query: 335 --GGTSELAAFLDEGPT---TRARCMHCGNHTTGPKC-EDCVEG 372
G A G + +C CG TGP C + C EG
Sbjct: 995 MFGHNCSQACSCFNGASCDPVHGQC-RCGPGWTGPTCLQACPEG 1037
Score = 108 (43.1 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 56/204 (27%), Positives = 78/204 (38%)
Query: 181 KCPPENECLNDHHTCDPQSEQCVDLADGFECV-CGRGYNKSEEGGECVPVCSQGCVRG-V 238
+C + C ++ C P S C A G+ C + G C +C GC+ G
Sbjct: 1214 RCGQQCHCPGENQACHPASGTCA-CAPGYHGAGCQQRCPPGRFGPGCELLC--GCLNGGS 1270
Query: 239 CSE-PDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCD------K 291
C C+C G++G +CS+ C +G GP VC C +G CD
Sbjct: 1271 CDAVTGACRCPAGFLGTDCSLACP-HGRF---GPGCAYVC-GCG---QGAACDPVTGSCS 1322
Query: 292 CEPLYVGDPRDNGEC------VPCSEYCNGHTG-LCINASLASLPFSPE-SGGTSELAAF 343
C P G ++G C V C C+ G LC +A+ S +G ELA
Sbjct: 1323 CPPGRTGVHCEHG-CPQNRFGVNCEHACSCRNGGLC-HATNGSCSCGLGWTGPHCELAC- 1379
Query: 344 LDEGPTTRARCMHCGNHTTGPKCE 367
G A + C H G CE
Sbjct: 1380 -PAGRYGAACSLECSCHNHGA-CE 1401
Score = 62 (26.9 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 28/102 (27%), Positives = 33/102 (32%)
Query: 44 CDQRTDCQDCLTSSGGEGGW--HECR----WSSMLNECISPSYEALYCAGGVCG--LVLG 95
CD+R C +G G W EC+ C P A G CG G
Sbjct: 665 CDKRDG--SCACKAGFRGEWCQDECQPGFFGPGCRQACTCPPGVACDPVSGECGKQCPAG 722
Query: 96 PHQAPQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVC 137
H C + C A T C CG R T G +C
Sbjct: 723 YH-GEDCGQECPAGTFGQNCSGSCSCGDAPCDRVT--GQCLC 761
Score = 51 (23.0 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 24/101 (23%), Positives = 33/101 (32%)
Query: 37 GSSCPLRCDQRTDCQDCLTSSGGEGGWHECR--WSSML-NECISPSYEALYCA------- 86
G C L CD + CL + +C W+ ++ NE P C+
Sbjct: 518 GPDCSLTCDDCRNGGTCLPTLDS----CDCPDGWTGLVCNETCPPDTFGKNCSFSCSCQN 573
Query: 87 GGVCGLVLGPHQAP------QCPRSCSAYTQCSTCLRHAHC 121
GG C V G + P C C C + HC
Sbjct: 574 GGTCDPVTGACRCPPGVGGAHCEDGCPKGFYGKHCRKKCHC 614
>WB|WBGene00000415 [details] [associations]
symbol:ced-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0043652
"engulfment of apoptotic cell" evidence=IMP] [GO:0043654
"recognition of apoptotic cell" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005044 "scavenger receptor activity"
evidence=ISS;IPI] [GO:0030670 "phagocytic vesicle membrane"
evidence=IDA] [GO:0031260 "pseudopodium membrane" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0001891 "phagocytic
cup" evidence=IDA] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 GO:GO:0016021
GO:GO:0006915 GO:GO:0009986 GO:GO:0030670 GO:GO:0042742
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0045184 GO:GO:0031532
GO:GO:0001891 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 HSSP:P46531 GO:GO:0043652 GO:GO:0012501
GO:GO:0034620 InterPro:IPR006212 SMART:SM00261 GO:GO:0005044
HOGENOM:HOG000294130 GO:GO:0001845 EMBL:AF332568 EMBL:AL032657
PIR:T26972 RefSeq:NP_001021772.1 RefSeq:NP_001021773.1
RefSeq:NP_001076621.1 RefSeq:NP_740922.1 UniGene:Cel.7093
ProteinModelPortal:Q9XWD6 SMR:Q9XWD6 IntAct:Q9XWD6 MINT:MINT-223151
STRING:Q9XWD6 PaxDb:Q9XWD6 PRIDE:Q9XWD6 EnsemblMetazoa:Y47H9C.4a
GeneID:173064 KEGG:cel:CELE_Y47H9C.4 UCSC:Y47H9C.4a CTD:173064
WormBase:Y47H9C.4a WormBase:Y47H9C.4b WormBase:Y47H9C.4c
WormBase:Y47H9C.4d GeneTree:ENSGT00690000101691 InParanoid:Q9XWD6
OMA:VYNDTEQ NextBio:878121 GO:GO:0031260 GO:GO:0043654
Uniprot:Q9XWD6
Length = 1111
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 40/122 (32%), Positives = 57/122 (46%)
Query: 213 CGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQ-------CNGH 265
C GY ++++ C+P C+ C +G C EP KC+CD GY G C+ C C+
Sbjct: 105 CCDGYYQTKDHF-CLPDCNPPCKKGKCIEPGKCECDPGYGGKYCASSCSVGTWGLGCSKS 163
Query: 266 ADC---AGPD-KLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSE--YCNGHTGL 319
DC A D +L C+ C + +G +C+K P P C PC CN G
Sbjct: 164 CDCENGANCDPELGTCI-CTSGFQGERCEKPCPDNKWGPNCVKSC-PCQNGGKCNKE-GK 220
Query: 320 CI 321
C+
Sbjct: 221 CV 222
>UNIPROTKB|Q9XWD6 [details] [associations]
symbol:ced-1 "Cell death abnormality protein 1"
species:6239 "Caenorhabditis elegans" [GO:0001845 "phagolysosome
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IDA;IMP] [GO:0042742 "defense response to bacterium"
evidence=IMP] [GO:0034620 "cellular response to unfolded protein"
evidence=IDA] [GO:0045184 "establishment of protein localization"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0031532 "actin cytoskeleton reorganization" evidence=IDA]
[GO:0012501 "programmed cell death" evidence=IMP] [GO:0009986 "cell
surface" evidence=IDA] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 GO:GO:0016021
GO:GO:0006915 GO:GO:0009986 GO:GO:0030670 GO:GO:0042742
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0045184 GO:GO:0031532
GO:GO:0001891 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 HSSP:P46531 GO:GO:0043652 GO:GO:0012501
GO:GO:0034620 InterPro:IPR006212 SMART:SM00261 GO:GO:0005044
HOGENOM:HOG000294130 GO:GO:0001845 EMBL:AF332568 EMBL:AL032657
PIR:T26972 RefSeq:NP_001021772.1 RefSeq:NP_001021773.1
RefSeq:NP_001076621.1 RefSeq:NP_740922.1 UniGene:Cel.7093
ProteinModelPortal:Q9XWD6 SMR:Q9XWD6 IntAct:Q9XWD6 MINT:MINT-223151
STRING:Q9XWD6 PaxDb:Q9XWD6 PRIDE:Q9XWD6 EnsemblMetazoa:Y47H9C.4a
GeneID:173064 KEGG:cel:CELE_Y47H9C.4 UCSC:Y47H9C.4a CTD:173064
WormBase:Y47H9C.4a WormBase:Y47H9C.4b WormBase:Y47H9C.4c
WormBase:Y47H9C.4d GeneTree:ENSGT00690000101691 InParanoid:Q9XWD6
OMA:VYNDTEQ NextBio:878121 GO:GO:0031260 GO:GO:0043654
Uniprot:Q9XWD6
Length = 1111
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 40/122 (32%), Positives = 57/122 (46%)
Query: 213 CGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQ-------CNGH 265
C GY ++++ C+P C+ C +G C EP KC+CD GY G C+ C C+
Sbjct: 105 CCDGYYQTKDHF-CLPDCNPPCKKGKCIEPGKCECDPGYGGKYCASSCSVGTWGLGCSKS 163
Query: 266 ADC---AGPD-KLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSE--YCNGHTGL 319
DC A D +L C+ C + +G +C+K P P C PC CN G
Sbjct: 164 CDCENGANCDPELGTCI-CTSGFQGERCEKPCPDNKWGPNCVKSC-PCQNGGKCNKE-GK 220
Query: 320 CI 321
C+
Sbjct: 221 CV 222
>RGD|620910 [details] [associations]
symbol:Fbn2 "fibrillin 2" species:10116 "Rattus norvegicus"
[GO:0030326 "embryonic limb morphogenesis" evidence=ISO]
[GO:0030501 "positive regulation of bone mineralization"
evidence=ISO] [GO:0035108 "limb morphogenesis" evidence=ISO]
[GO:0035583 "sequestering of TGFbeta in extracellular matrix"
evidence=ISO] [GO:0045669 "positive regulation of osteoblast
differentiation" evidence=ISO] [GO:0060346 "bone trabecula
formation" evidence=ISO] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR011398 InterPro:IPR018097 Pfam:PF07645
PIRSF:PIRSF036312 PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 RGD:620910 GO:GO:0005578
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
eggNOG:NOG12793 PROSITE:PS00010 InterPro:IPR009030 SUPFAM:SSF57184
InterPro:IPR026823 Pfam:PF12662 HSSP:P35555 GO:GO:0005201
HOVERGEN:HBG005643 Gene3D:3.90.290.10 InterPro:IPR017878
PANTHER:PTHR24039:SF0 Pfam:PF00683 SUPFAM:SSF57581 PROSITE:PS51364
CTD:2201 IPI:IPI00204009 EMBL:AF135060 RefSeq:NP_114014.1
UniGene:Rn.22906 ProteinModelPortal:Q9WUH9 SMR:Q9WUH9 IntAct:Q9WUH9
PRIDE:Q9WUH9 GeneID:689008 KEGG:rno:689008 NextBio:737709
Genevestigator:Q9WUH9 Uniprot:Q9WUH9
Length = 2906
Score = 148 (57.2 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 76/315 (24%), Positives = 120/315 (38%)
Query: 40 CPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECIS-PSYEALYCAGGVCGLVLGPHQ 98
C +C +C + S G + R + ++EC + P C GG C + G ++
Sbjct: 1245 CDTQCTNSEGSYEC-SCSEGYALMPDGRSCADIDECENNPDI----CDGGQCTNIPGEYR 1299
Query: 99 APQCPRSCSAYTQCSTCLRHAHCGW----CAL-QRDTTGGMGVCTXXXXXXXXXXXXXXT 153
C A TC+ C C + + T G +C T
Sbjct: 1300 C-LCYDGFMASMDMKTCIDVNECDLNPNICMFGECENTKGSFICHCQLGYSVKKGATGCT 1358
Query: 154 ----CDILFYQTYPDQVIE-VNNNDSFS------W--NYVKCPPENECLNDHHTCDPQSE 200
C+I + D +N SF W N +KC +EC N H C +
Sbjct: 1359 DVDECEIGAHNC--DMHASCLNVPGSFKCSCREGWVGNGIKCIDLDECANGTHQCSINA- 1415
Query: 201 QCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG---CVRGVC-SEPD--KCQCDFGYV 252
QCV+ + C C G+ + +G C V C++ C G C + P +C+C+ G+
Sbjct: 1416 QCVNTPGSYRCACSEGF--TGDGFTCSDVDECAENINLCENGQCLNVPGAYRCECEMGFT 1473
Query: 253 GVNCSIQCQCNGHADCAGPDKLDVCL--RCHNHTKGPQCDKCEPLYVGDPRDNGECVP-- 308
+ S CQ +C+ + +C+ C+N C C+ Y G R G C
Sbjct: 1474 PASDSRSCQ--DIDECSFQN---ICVFGTCNNLPGMFHCI-CDDGY-GLDRTGGHCTDID 1526
Query: 309 -CSEYCNGHTGLCIN 322
C++ N GLC+N
Sbjct: 1527 ECADPINCVNGLCVN 1541
Score = 126 (49.4 bits), Expect = 0.00052, P = 0.00052
Identities = 52/207 (25%), Positives = 83/207 (40%)
Query: 172 NDSFSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV-- 229
++ F+ + C +EC + + C+ + QC+++ + C C G+ + + C +
Sbjct: 1429 SEGFTGDGFTCSDVDECAENINLCE--NGQCLNVPGAYRCECEMGFTPASDSRSCQDIDE 1486
Query: 230 CS-QG-CVRGVCSE-PDK--CQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLR--CHN 282
CS Q CV G C+ P C CD GY G++ + C +CA P C+ C N
Sbjct: 1487 CSFQNICVFGTCNNLPGMFHCICDDGY-GLDRT-GGHCTDIDECADPIN---CVNGLCVN 1541
Query: 283 HTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAA 342
+C+ C P D + N V C + G C L F P G+
Sbjct: 1542 TPGRYECN-CPP----DFQLNATGVGCVD---NRVGNCY------LKFGPRGDGSLSCKT 1587
Query: 343 FLDEGPTTRARCMHCGNHTTGPKCEDC 369
+ G + + C G P CE C
Sbjct: 1588 EVGVGVSCSSCCCSLGKAWGNP-CETC 1613
>MGI|MGI:95490 [details] [associations]
symbol:Fbn2 "fibrillin 2" species:10090 "Mus musculus"
[GO:0001527 "microfibril" evidence=TAS] [GO:0005201 "extracellular
matrix structural constituent" evidence=IEA] [GO:0005509 "calcium
ion binding" evidence=TAS] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IMP] [GO:0030501 "positive regulation of bone
mineralization" evidence=IMP] [GO:0035108 "limb morphogenesis"
evidence=IMP] [GO:0035583 "sequestering of TGFbeta in extracellular
matrix" evidence=IMP] [GO:0045669 "positive regulation of
osteoblast differentiation" evidence=IMP] [GO:0060346 "bone
trabecula formation" evidence=IMP] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR011398 InterPro:IPR018097
Pfam:PF07645 PIRSF:PIRSF036312 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 MGI:MGI:95490 InterPro:IPR000152
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030326
GO:GO:0030501 GO:GO:0045669 PROSITE:PS01186 eggNOG:NOG12793
PROSITE:PS00010 GO:GO:0001527 InterPro:IPR009030 SUPFAM:SSF57184
InterPro:IPR026823 Pfam:PF12662 GO:GO:0005201 GO:GO:0060346
GeneTree:ENSGT00700000104076 HOGENOM:HOG000231768
HOVERGEN:HBG005643 Gene3D:3.90.290.10 InterPro:IPR017878
PANTHER:PTHR24039:SF0 Pfam:PF00683 SUPFAM:SSF57581 PROSITE:PS51364
OrthoDB:EOG45TCM7 GO:GO:0035583 CTD:2201 OMA:SGRNCID EMBL:L39790
EMBL:AC102317 EMBL:AC127358 EMBL:S69359 IPI:IPI00122439 PIR:A57278
RefSeq:NP_034311.2 RefSeq:XP_001473465.1 UniGene:Mm.20271
ProteinModelPortal:Q61555 SMR:Q61555 STRING:Q61555
PhosphoSite:Q61555 PRIDE:Q61555 Ensembl:ENSMUST00000025497
GeneID:100047082 GeneID:14119 KEGG:mmu:100047082 KEGG:mmu:14119
UCSC:uc008ezn.1 InParanoid:Q61555 NextBio:460520 Bgee:Q61555
CleanEx:MM_FBN2 Genevestigator:Q61555 GermOnline:ENSMUSG00000024598
Uniprot:Q61555
Length = 2907
Score = 148 (57.2 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 84/348 (24%), Positives = 129/348 (37%)
Query: 8 YGMSGQVAYTLEP-RTVKTDANRTNIKLKTGSSCPLRCDQRTDCQDCLTSSGGEGGWHEC 66
Y S Y P R TD + I C +C +C + S G +
Sbjct: 1216 YQCSCNPGYQATPDRQGCTDIDECMIM---NGGCDTQCTNSEGSYEC-SCSEGYALMPDG 1271
Query: 67 RWSSMLNECIS-PSYEALYCAGGVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHCGW-- 123
R + ++EC + P C GG C + G ++ C A TC+ C
Sbjct: 1272 RSCADIDECENNPDI----CDGGQCTNIPGEYRC-LCYDGFMASMDMKTCIDVNECDLNP 1326
Query: 124 --CAL-QRDTTGGMGVCTXXXXXXXXXXXXXXT----CDILFYQTYPDQVIE-VNNNDSF 175
C + + T G +C T C+I + D +N SF
Sbjct: 1327 NICMFGECENTKGSFICHCQLGYSVKKGTTGCTDVDECEIGAHNC--DMHASCLNVPGSF 1384
Query: 176 S------W--NYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECV 227
W N +KC +EC N H C + QCV+ + C C G+ + +G C
Sbjct: 1385 KCSCREGWVGNGIKCIDLDECANGTHQCSINA-QCVNTPGSYRCACSEGF--TGDGFTCS 1441
Query: 228 PV--CSQG---CVRGVC-SEPD--KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCL- 278
V C++ C G C + P +C+C+ G+ + S CQ +C+ + +C+
Sbjct: 1442 DVDECAENTNLCENGQCLNVPGAYRCECEMGFTPASDSRSCQ--DIDECSFQN---ICVF 1496
Query: 279 -RCHNHTKGPQCDKCEPLYVGDPRDNGECVP---CSEYCNGHTGLCIN 322
C+N C C+ Y D R G C C++ N GLC+N
Sbjct: 1497 GTCNNLPGMFHCI-CDDGYELD-RTGGNCTDIDECADPINCVNGLCVN 1542
Score = 128 (50.1 bits), Expect = 0.00032, P = 0.00032
Identities = 52/210 (24%), Positives = 85/210 (40%)
Query: 172 NDSFSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV-- 229
++ F+ + C +EC + + C+ + QC+++ + C C G+ + + C +
Sbjct: 1430 SEGFTGDGFTCSDVDECAENTNLCE--NGQCLNVPGAYRCECEMGFTPASDSRSCQDIDE 1487
Query: 230 CS-QG-CVRGVCSE-PDK--CQCDFGY----VGVNCSIQCQCNGHADCAGPDKLDVCLRC 280
CS Q CV G C+ P C CD GY G NC+ +C +C +C+
Sbjct: 1488 CSFQNICVFGTCNNLPGMFHCICDDGYELDRTGGNCTDIDECADPINCVN----GLCV-- 1541
Query: 281 HNHTKGP-QCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSE 339
+T G +C+ C P + +P G CV + G C L F P G+
Sbjct: 1542 --NTPGRYECN-CPPDFQLNPTGVG-CV------DNRVGNCY------LKFGPRGDGSLS 1585
Query: 340 LAAFLDEGPTTRARCMHCGNHTTGPKCEDC 369
+ G + + C G P CE C
Sbjct: 1586 CNTEVGVGVSRSSCCCSLGKAWGNP-CETC 1614
>UNIPROTKB|Q28019 [details] [associations]
symbol:LTBP2 "Latent-transforming growth factor
beta-binding protein 2" species:9913 "Bos taurus" [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0019838
"growth factor binding" evidence=IEA] [GO:0008201 "heparin binding"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005578
GO:GO:0008201 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 PROSITE:PS00010 InterPro:IPR009030 SUPFAM:SSF57184
InterPro:IPR026823 Pfam:PF12662 Gene3D:3.90.290.10
InterPro:IPR017878 Pfam:PF00683 SUPFAM:SSF57581 PROSITE:PS51364
eggNOG:NOG318792 KO:K08023 HOGENOM:HOG000293153 HOVERGEN:HBG052370
EMBL:U35363 IPI:IPI00718698 RefSeq:NP_776810.1 UniGene:Bt.5011
ProteinModelPortal:Q28019 PRIDE:Q28019 GeneID:281905
KEGG:bta:281905 CTD:4053 InParanoid:Q28019 OrthoDB:EOG46Q6RN
NextBio:20805800 Uniprot:Q28019
Length = 1842
Score = 147 (56.8 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 55/171 (32%), Positives = 70/171 (40%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGG--ECVPV--CSQ-G-CV 235
C +NECL D C + +CV+ + C C GY + G EC + C Q G C
Sbjct: 877 CTDDNECLRD--PCKGRG-RCVNRVGSYSCFCYPGYKLATSGATQECQDIDECEQPGVCS 933
Query: 236 RGVCSEPD---KCQCDFGYVGV---NCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQC 289
RG C+ + C+CD GY+ V +C +C C PD +C N C
Sbjct: 934 RGRCTNTEGSYHCECDQGYIMVRKGHCQDINECRHPGTC--PDG-----KCVNSPGSYTC 986
Query: 290 DKCEPLYVGDPRDNGECVPCSE-----YCNGHTGLCINASLASLPFSPESG 335
CE Y G G CV +E C H G CIN S S E G
Sbjct: 987 LPCEEGYRGQ---GGSCVDVNECLTPGVCT-H-GTCINLE-GSFRCSCEQG 1031
Score = 127 (49.8 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 42/157 (26%), Positives = 65/157 (41%)
Query: 178 NYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CS--QG 233
N C +EC+ + + C P+ E C++ F C+C G+ ++ G C V C+
Sbjct: 1162 NGTVCEDVDECVGEEY-CAPRGE-CLNSHGSFFCLCADGFVSADGGTSCQDVDECAVTDR 1219
Query: 234 CVRGVCSEPD---KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCD 290
CV G C D C C+ G+ S +C + G + + RC N +C
Sbjct: 1220 CVGGQCVNTDGSFNCVCETGFQPSPESGECVDIDECEDLG-EPICGAWRCENSPGSYRCV 1278
Query: 291 K-CEPLYVGDPRDNGECVPCSEYCN----GHTGLCIN 322
C+P + P G+C+ E N G G C N
Sbjct: 1279 LGCQPGFHMAP--TGDCIDIDECANDTVCGSHGFCDN 1313
Score = 124 (48.7 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 58/199 (29%), Positives = 82/199 (41%)
Query: 195 CDPQSEQCVDLADGFECVCGRGY--NKSE----EGGECV--PVCSQG-CVRGVCSEPDKC 245
C P + CV+L DG+ C+C GY + S+ + EC+ P +G CV V S C
Sbjct: 848 CGPGT--CVNLPDGYRCICSPGYRLHPSQAYCTDDNECLRDPCKGRGRCVNRVGSY--SC 903
Query: 246 QCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLR--CHNHTKGPQCDKCEPLYVGDPRDN 303
C GY +C +C P VC R C N T+G +C+ Y+ +
Sbjct: 904 FCYPGYKLATSGATQECQDIDECEQPG---VCSRGRCTN-TEGSYHCECDQGYIMVRK-- 957
Query: 304 GECVPCSEYCNGHTGLCINASLASLPFS----P-ESGGTSELAAFLDEGPT-TRARCMH- 356
G C +E C H G C + + P S P E G + + +D T C H
Sbjct: 958 GHCQDINE-CR-HPGTCPDGKCVNSPGSYTCLPCEEGYRGQGGSCVDVNECLTPGVCTHG 1015
Query: 357 -CGNHTTGPKCEDCVEGKE 374
C N +C C +G E
Sbjct: 1016 TCINLEGSFRCS-CEQGYE 1033
Score = 47 (21.6 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 16/52 (30%), Positives = 20/52 (38%)
Query: 39 SCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEAL--YCAGG 88
+C L QR Q C S G+ W S+ +C P EA C G
Sbjct: 670 TCALPLAQRITKQICCCSRVGKA------WGSLCEKCPLPGTEAFREICPAG 715
>FB|FBgn0028542 [details] [associations]
symbol:nimB4 "nimrod B4" species:7227 "Drosophila
melanogaster" [GO:0017147 "Wnt-protein binding" evidence=ISS]
[GO:0016055 "Wnt receptor signaling pathway" evidence=ISS]
[GO:0042742 "defense response to bacterium" evidence=ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0051635
"bacterial cell surface binding" evidence=ISS] InterPro:IPR000742
SMART:SM00181 GO:GO:0005576 EMBL:AE014134 GO:GO:0042742
GO:GO:0051635 HSSP:P10968 GeneTree:ENSGT00660000095436
EMBL:AY118814 RefSeq:NP_788046.1 UniGene:Dm.13869 SMR:Q9VJU8
IntAct:Q9VJU8 MINT:MINT-777605 EnsemblMetazoa:FBtr0080617
GeneID:34814 KEGG:dme:Dmel_CG33115 UCSC:CG33115-RA CTD:34814
FlyBase:FBgn0028542 eggNOG:NOG310715 InParanoid:Q9VJU8 OMA:VIEVCCK
OrthoDB:EOG4W0VVD GenomeRNAi:34814 NextBio:790350 Uniprot:Q9VJU8
Length = 448
Score = 134 (52.2 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 53/178 (29%), Positives = 74/178 (41%)
Query: 157 LFYQTYPDQVIEVNNNDSFSW-NYVK--CPPENECLNDHHTCDPQ-SEQCVD---LADGF 209
+F+Q Y +V V N+ + + N ++ C D C P E+C + G
Sbjct: 99 VFFQ-YDKEVKIVGNSSTNPYMNVIEVCCKGWRRYEYDWSQCVPDCGERCQENGFCVAGG 157
Query: 210 ECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYV--GVNCSIQCQCN---G 264
+CVC + + CVP C GC G C CQCD GY G Q QCN G
Sbjct: 158 KCVCFTDFVLNYRNN-CVPTCPLGCPHGRCYLNGTCQCDKGYELDGSRKFCQPQCNATCG 216
Query: 265 HAD-CAGPDKLDVCLRCHNHTKGPQCDK---CEPLYVGDPRDNGECVPCSEYCNGHTG 318
H + C P K C +T+G + C+P+ + D G CV +E C G
Sbjct: 217 HNEVCLEPGK---CSCAEGYTRGLRESAALGCQPICIPDC-GYGHCVRPNE-CECFPG 269
Score = 123 (48.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 38/122 (31%), Positives = 51/122 (41%)
Query: 178 NYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRG 237
N + C E +C + TC+ + C A+ CVC GY + C+P C C G
Sbjct: 275 NGITC--EGDC---YMTCE--NGFC---ANKTTCVCQNGYRYDKNTTTCLPDCGDNCDNG 324
Query: 238 VCSEPDKCQCDFGYVG--VNCSIQCQ--CNGHADCAGPDKLDVCLRCHNHTKGPQ--CDK 291
VC P C+C GYV C C C + C P+ VC C GP+ +
Sbjct: 325 VCISPGNCRCFKGYVRNRERCEAVCVGGCGFYGKCIAPN---VC-GCAI-VPGPERTYQR 379
Query: 292 CE 293
CE
Sbjct: 380 CE 381
Score = 120 (47.3 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 42/136 (30%), Positives = 58/136 (42%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKS-EEGGE--CVPVCSQGCVRGV 238
C P+ C + TC +E C++ G +C C GY + E C P+C C G
Sbjct: 207 CQPQ--C---NATCG-HNEVCLE--PG-KCSCAEGYTRGLRESAALGCQPICIPDCGYGH 257
Query: 239 CSEPDKCQCDFGYV----GVNCSIQCQ--C-NGHADCAGPDKLDVCLRCHNHTKGPQCDK 291
C P++C+C G+ G+ C C C NG CA VC + + K
Sbjct: 258 CVRPNECECFPGFQKRKNGITCEGDCYMTCENGF--CANKTTC-VCQNGYRYDKNTTT-- 312
Query: 292 CEPLYVGDPRDNGECV 307
C P GD DNG C+
Sbjct: 313 CLP-DCGDNCDNGVCI 327
Score = 100 (40.3 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 27/103 (26%), Positives = 40/103 (38%)
Query: 210 ECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQC--QCNGHAD 267
EC C G+ K + G C C C G C+ C C GY + C C + D
Sbjct: 263 ECECFPGFQKRKNGITCEGDCYMTCENGFCANKTTCVCQNGYRYDKNTTTCLPDCGDNCD 322
Query: 268 ---CAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECV 307
C P C + + + ++CE + VG G+C+
Sbjct: 323 NGVCISPGNCR-CFKGYVRNR----ERCEAVCVGGCGFYGKCI 360
Score = 58 (25.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 21/66 (31%), Positives = 27/66 (40%)
Query: 62 GW--HECRWSSMLNECISPSYEALYC-AGGVC----GLVLGPHQ--APQCPRSCSAYTQC 112
GW +E WS + +C E +C AGG C VL P CP C + +C
Sbjct: 128 GWRRYEYDWSQCVPDCGERCQENGFCVAGGKCVCFTDFVLNYRNNCVPTCPLGCP-HGRC 186
Query: 113 ---STC 115
TC
Sbjct: 187 YLNGTC 192
>ZFIN|ZDB-GENE-070112-1202 [details] [associations]
symbol:zgc:158328 "zgc:158328" species:7955 "Danio
rerio" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR011489 InterPro:IPR018097
Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51041
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-070112-1202 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS00010 Pfam:PF12661
HOGENOM:HOG000097840 HOVERGEN:HBG079790 EMBL:BC129204
IPI:IPI00829071 RefSeq:NP_001073658.1 UniGene:Dr.95104
ProteinModelPortal:A1L1T4 STRING:A1L1T4 GeneID:567225
KEGG:dre:567225 InParanoid:A1L1T4 NextBio:20888577 Uniprot:A1L1T4
Length = 1339
Score = 146 (56.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 72/234 (30%), Positives = 97/234 (41%)
Query: 180 VKCPPENECLNDHHTCDPQSEQCVDLADGF---EC--VCGRG-YNKSEEGGECVPVCSQG 233
+ C +C N +CDP S QC A G+ C C G + K+ E +C+
Sbjct: 897 LNCSQSCDCHNGG-SCDPVSGQC-SCAPGWTGDRCQQTCASGWFGKNCEQ-KCICPVGVA 953
Query: 234 C--VRGVCSEP-----DKCQ--CDFGYVGVNCSIQCQCNG-----H-----ADCAGPDKL 274
C V G C P + C+ C G G+NCS C C+G H C
Sbjct: 954 CDHVTGRCGCPAGYTGNSCEKMCPQGRFGLNCSRVCSCSGDQYRCHHITGRCSCQPGYNG 1013
Query: 275 DVCL-RCHNHTKGPQCDK-CEPLYVG--DPRDNGECVPCSEYCNGHTGLCINASLASLPF 330
+ CL RC T GP C K C G D R NG C+ C G+ G N S+ S P
Sbjct: 1014 NRCLLRCREGTYGPYCKKRCSCANGGRCDFR-NGSCI-CQP---GYFGP--NCSI-SCPS 1065
Query: 331 SPESGGTSELAAFLDEG---PTTRARCMHCGNHTTGPKCED-CVEGKENRQSRN 380
+++ + ++G P T RC +C TTG CE C G+ Q R+
Sbjct: 1066 GHYGRDCAQVCSCGEKGQCHPET-GRC-NCAPGTTGLSCEQMCPRGRYGVQCRS 1117
Score = 131 (51.2 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 59/212 (27%), Positives = 76/212 (35%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCS- 240
C C N CD ++ C+ F C G +C VCS G +G C
Sbjct: 1029 CKKRCSCANGGR-CDFRNGSCICQPGYFGPNCSISCPSGHYGRDCAQVCSCG-EKGQCHP 1086
Query: 241 EPDKCQCDFGYVGVNCSIQC-------QCNGHADCAGP---DKLDVCLRCHNHTKGPQCD 290
E +C C G G++C C QC CA D ++ RC G C+
Sbjct: 1087 ETGRCNCAPGTTGLSCEQMCPRGRYGVQCRSFCTCANGGVCDPVNGTCRCGLGWTGQHCE 1146
Query: 291 K-CEPLYVGDPRDNGECVPCSEY--CNGHTGLCINASLASLPFSPESGGTSELAAFLDEG 347
K C + G + +CV C C+ TG C S S + P A F E
Sbjct: 1147 KVCVSGHYGVNCEQ-KCV-CQNNGTCDRFTGCC---SCPSGYYGPACQHRCP-AGFFGEL 1200
Query: 348 PTTRARCM--HCGNHTTGPKCEDCVEGKENRQ 377
C H +H TG KCE C G Q
Sbjct: 1201 CAQPCVCKQGHQCDHVTG-KCE-CPPGYHGNQ 1230
Score = 124 (48.7 bits), Expect = 0.00037, P = 0.00037
Identities = 90/369 (24%), Positives = 121/369 (32%)
Query: 37 GSSCPLRCD--QRTDCQ----DCLTSSGGEGGW-H-EC-RWS---SMLNECISPSYEALY 84
G C RC+ C CL + G G + H C +WS EC +L
Sbjct: 633 GRLCRRRCNCPNNGHCHRLYGGCLCTPGLYGKFCHLPCPKWSHGAGCSEECECVQENSLS 692
Query: 85 CAG--GVCGLVLGPHQAPQCPRSCS-AYTQCSTCLRHAHCGWCALQRDTTGGMGVCTXXX 141
C G C G H +C C Y C H C C+ + G C
Sbjct: 693 CDPQMGTCLCKPGYH-GDRCQTDCDDGYFGVG-C--HGLCN-CSDGKSCDPKTGECQRMC 747
Query: 142 XXXXXXXXXXXTCDILFYQTYPDQVIEVNNND-SFSWNYVKCPPENECLNDHHTCDPQSE 200
C+ F+ V + +N S + +C E+ H CD +
Sbjct: 748 PAGYHGEKCQMVCEAGFWGAGCANVCQCASNAVSCESSSGRCVCESGYTGQH--CDKKCS 805
Query: 201 QCVDLADGFE-CVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQ 259
+ + AD + C C G G C C+ G V C + +C G+ G +C+
Sbjct: 806 EGLYGADCKQVCECENGAECDHVSGACT--CAAGWVGSHCEK----RCPVGFYGQDCAQM 859
Query: 260 CQCNGHADCAGPDKLDVCLRCHNHTKGPQCD-KCEPLYVG-------DPRDNGECVPCSE 311
CQC A C + RC P C C G D + G C P S
Sbjct: 860 CQCRNEAQC---HHITGACRCTPGWAPPHCILACPAGTFGLNCSQSCDCHNGGSCDPVSG 916
Query: 312 YCN---GHTGLCINASLASLPFSPESGGTSELAAFLDEGPT---TRARCMHCGNHTTGPK 365
C+ G TG + AS F G E G RC C TG
Sbjct: 917 QCSCAPGWTGDRCQQTCASGWF----GKNCEQKCICPVGVACDHVTGRC-GCPAGYTGNS 971
Query: 366 CED-CVEGK 373
CE C +G+
Sbjct: 972 CEKMCPQGR 980
Score = 56 (24.8 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 21/86 (24%), Positives = 30/86 (34%)
Query: 36 TGSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLG 95
TG+SC C Q +C G + C + C P Y C G
Sbjct: 968 TGNSCEKMCPQGRFGLNCSRVCSCSGDQYRCHHITGRCSC-QPGYNGNRCLLRCREGTYG 1026
Query: 96 PHQAPQCPRSCSAYTQCSTCLRHAHC 121
P+ +C SC+ +C R+ C
Sbjct: 1027 PYCKKRC--SCANGGRCD--FRNGSC 1048
Score = 45 (20.9 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 23/91 (25%), Positives = 29/91 (31%)
Query: 36 TGSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGL-VL 94
TG C +C + DC E G EC S C + + +C C +
Sbjct: 796 TGQHCDKKCSEGLYGADCKQVCECENG-AECDHVSGACTCAA-GWVGSHCEKR-CPVGFY 852
Query: 95 GPHQAPQCPRSCSAYTQCSTCLRHAHC--GW 123
G A C C QC C GW
Sbjct: 853 GQDCAQMC--QCRNEAQCHHITGACRCTPGW 881
>UNIPROTKB|F1RKK1 [details] [associations]
symbol:FBN2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR011398 InterPro:IPR018097 Pfam:PF07645
PIRSF:PIRSF036312 PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 GO:GO:0005578 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS01186 PROSITE:PS00010
InterPro:IPR009030 SUPFAM:SSF57184 InterPro:IPR026823 Pfam:PF12662
GO:GO:0005201 GeneTree:ENSGT00700000104076 Gene3D:3.90.290.10
InterPro:IPR017878 PANTHER:PTHR24039:SF0 Pfam:PF00683
SUPFAM:SSF57581 PROSITE:PS51364 EMBL:CU929945
Ensembl:ENSSSCT00000015577 Uniprot:F1RKK1
Length = 2432
Score = 147 (56.8 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 84/348 (24%), Positives = 129/348 (37%)
Query: 8 YGMSGQVAYTLEP-RTVKTDANRTNIKLKTGSSCPLRCDQRTDCQDCLTSSGGEGGWHEC 66
Y S Y P R TD + I C +C +C + S G +
Sbjct: 736 YQCSCNPGYQATPDRQGCTDIDECMIM---NGGCDTQCTNSEGSYEC-SCSEGYALMPDG 791
Query: 67 RWSSMLNECIS-PSYEALYCAGGVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHCGW-- 123
R + ++EC + P C GG C + G ++ C A TC+ C
Sbjct: 792 RSCADIDECENNPDI----CDGGQCTNIPGEYRC-LCYDGFMASMDMKTCIDVNECDLNS 846
Query: 124 --CAL-QRDTTGGMGVCTXXXXXXXXXXXXXXT----CDILFYQTYPDQVIE-VNNNDSF 175
C + + T G +C T C+I + D +N SF
Sbjct: 847 NICMFGECENTKGSFICHCQLGYSVKKGTTGCTDVDECEIGAHNC--DMHASCLNVPGSF 904
Query: 176 S------W--NYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECV 227
W N +KC +EC N H C + QCV+ + C C G+ + +G C
Sbjct: 905 KCSCREGWVGNGIKCIDLDECSNGTHQCSINA-QCVNTPGSYRCACSEGF--TGDGFTCS 961
Query: 228 PV--CSQG---CVRGVC-SEPD--KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCL- 278
V C++ C G C + P +C+C+ G+ + S CQ +C+ + +C+
Sbjct: 962 DVDECAENINLCENGQCLNVPGAYRCECEMGFTPASDSRSCQ--DIDECSFQN---ICVF 1016
Query: 279 -RCHNHTKGPQCDKCEPLYVGDPRDNGECVP---CSEYCNGHTGLCIN 322
C+N C C+ Y D R G C C++ N GLC+N
Sbjct: 1017 GTCNNLPGMFHCI-CDDGYELD-RTGGNCTDIDECADPINCVNGLCVN 1062
Score = 128 (50.1 bits), Expect = 0.00026, P = 0.00026
Identities = 52/210 (24%), Positives = 85/210 (40%)
Query: 172 NDSFSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV-- 229
++ F+ + C +EC + + C+ + QC+++ + C C G+ + + C +
Sbjct: 950 SEGFTGDGFTCSDVDECAENINLCE--NGQCLNVPGAYRCECEMGFTPASDSRSCQDIDE 1007
Query: 230 CS-QG-CVRGVCSE-PDK--CQCDFGY----VGVNCSIQCQCNGHADCAGPDKLDVCLRC 280
CS Q CV G C+ P C CD GY G NC+ +C +C +C+
Sbjct: 1008 CSFQNICVFGTCNNLPGMFHCICDDGYELDRTGGNCTDIDECADPINCVN----GLCV-- 1061
Query: 281 HNHTKGP-QCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSE 339
+T G +C+ C P + +P G CV + G C L F P G+
Sbjct: 1062 --NTPGRYECN-CPPDFQLNPTGVG-CV------DNRVGNCY------LKFGPRGDGSLS 1105
Query: 340 LAAFLDEGPTTRARCMHCGNHTTGPKCEDC 369
+ G + + C G P CE C
Sbjct: 1106 CNTEIGVGVSRSSCCCSLGKAWGNP-CETC 1134
>UNIPROTKB|I3LJJ0 [details] [associations]
symbol:FBN2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060346 "bone trabecula formation" evidence=IEA]
[GO:0045669 "positive regulation of osteoblast differentiation"
evidence=IEA] [GO:0035583 "sequestering of TGFbeta in extracellular
matrix" evidence=IEA] [GO:0030501 "positive regulation of bone
mineralization" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR011398 InterPro:IPR018097 Pfam:PF07645
PIRSF:PIRSF036312 PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 GO:GO:0005578 GO:GO:0005509
InterPro:IPR013032 GO:GO:0030326 GO:GO:0030501 GO:GO:0045669
PROSITE:PS01186 PROSITE:PS00010 InterPro:IPR009030 SUPFAM:SSF57184
InterPro:IPR026823 Pfam:PF12662 GO:GO:0005201 GO:GO:0060346
GeneTree:ENSGT00700000104076 Gene3D:3.90.290.10 InterPro:IPR017878
PANTHER:PTHR24039:SF0 Pfam:PF00683 SUPFAM:SSF57581 PROSITE:PS51364
GO:GO:0035583 OMA:SGRNCID EMBL:CU929945 Ensembl:ENSSSCT00000025170
Uniprot:I3LJJ0
Length = 2433
Score = 147 (56.8 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 84/348 (24%), Positives = 129/348 (37%)
Query: 8 YGMSGQVAYTLEP-RTVKTDANRTNIKLKTGSSCPLRCDQRTDCQDCLTSSGGEGGWHEC 66
Y S Y P R TD + I C +C +C + S G +
Sbjct: 736 YQCSCNPGYQATPDRQGCTDIDECMIM---NGGCDTQCTNSEGSYEC-SCSEGYALMPDG 791
Query: 67 RWSSMLNECIS-PSYEALYCAGGVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHCGW-- 123
R + ++EC + P C GG C + G ++ C A TC+ C
Sbjct: 792 RSCADIDECENNPDI----CDGGQCTNIPGEYRC-LCYDGFMASMDMKTCIDVNECDLNS 846
Query: 124 --CAL-QRDTTGGMGVCTXXXXXXXXXXXXXXT----CDILFYQTYPDQVIE-VNNNDSF 175
C + + T G +C T C+I + D +N SF
Sbjct: 847 NICMFGECENTKGSFICHCQLGYSVKKGTTGCTDVDECEIGAHNC--DMHASCLNVPGSF 904
Query: 176 S------W--NYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECV 227
W N +KC +EC N H C + QCV+ + C C G+ + +G C
Sbjct: 905 KCSCREGWVGNGIKCIDLDECSNGTHQCSINA-QCVNTPGSYRCACSEGF--TGDGFTCS 961
Query: 228 PV--CSQG---CVRGVC-SEPD--KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCL- 278
V C++ C G C + P +C+C+ G+ + S CQ +C+ + +C+
Sbjct: 962 DVDECAENINLCENGQCLNVPGAYRCECEMGFTPASDSRSCQ--DIDECSFQN---ICVF 1016
Query: 279 -RCHNHTKGPQCDKCEPLYVGDPRDNGECVP---CSEYCNGHTGLCIN 322
C+N C C+ Y D R G C C++ N GLC+N
Sbjct: 1017 GTCNNLPGMFHCI-CDDGYELD-RTGGNCTDIDECADPINCVNGLCVN 1062
Score = 128 (50.1 bits), Expect = 0.00026, P = 0.00026
Identities = 52/210 (24%), Positives = 85/210 (40%)
Query: 172 NDSFSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV-- 229
++ F+ + C +EC + + C+ + QC+++ + C C G+ + + C +
Sbjct: 950 SEGFTGDGFTCSDVDECAENINLCE--NGQCLNVPGAYRCECEMGFTPASDSRSCQDIDE 1007
Query: 230 CS-QG-CVRGVCSE-PDK--CQCDFGY----VGVNCSIQCQCNGHADCAGPDKLDVCLRC 280
CS Q CV G C+ P C CD GY G NC+ +C +C +C+
Sbjct: 1008 CSFQNICVFGTCNNLPGMFHCICDDGYELDRTGGNCTDIDECADPINCVN----GLCV-- 1061
Query: 281 HNHTKGP-QCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSE 339
+T G +C+ C P + +P G CV + G C L F P G+
Sbjct: 1062 --NTPGRYECN-CPPDFQLNPTGVG-CV------DNRVGNCY------LKFGPRGDGSLS 1105
Query: 340 LAAFLDEGPTTRARCMHCGNHTTGPKCEDC 369
+ G + + C G P CE C
Sbjct: 1106 CNTEIGVGVSRSSCCCSLGKAWGNP-CETC 1134
>UNIPROTKB|E2R3Q6 [details] [associations]
symbol:NTN3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] InterPro:IPR001134 PROSITE:PS50189
GO:GO:0005794 GO:GO:0005576 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
CTD:4917 KO:K06844 OMA:TASPLCW GeneTree:ENSGT00700000104042
EMBL:AAEX03004613 RefSeq:XP_537003.3 Ensembl:ENSCAFT00000030773
GeneID:479878 KEGG:cfa:479878 NextBio:20854992 Uniprot:E2R3Q6
Length = 577
Score = 140 (54.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 39/122 (31%), Positives = 53/122 (43%)
Query: 259 QCQCNGHAD-CAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDP------RDNGECVPCSE 311
+C+CNGHA C + + C + T+GP C +C+P Y P R+ C+ CS
Sbjct: 254 RCKCNGHASRCLLDTQGHLICDCQHGTEGPDCGRCKPFYCDRPWQRATAREAHACLACS- 312
Query: 312 YCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCV 370
CNGH C N L L SGG C++C ++T G C C
Sbjct: 313 -CNGHARRCRFNMELYRLS-GRRSGGV----------------CLNCRHNTAGRHCHYCR 354
Query: 371 EG 372
EG
Sbjct: 355 EG 356
>UNIPROTKB|F1SUI0 [details] [associations]
symbol:NTN3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005794
GO:GO:0005576 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 CTD:4917 KO:K06844
GeneTree:ENSGT00700000104042 OMA:RAHPASY EMBL:FP102361
RefSeq:XP_003354720.1 Ensembl:ENSSSCT00000008826 GeneID:100622906
KEGG:ssc:100622906 Uniprot:F1SUI0
Length = 580
Score = 140 (54.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 39/122 (31%), Positives = 53/122 (43%)
Query: 259 QCQCNGHAD-CAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDP------RDNGECVPCSE 311
+C+CNGHA C + + C + T+GP C +C+P Y P R+ C+ CS
Sbjct: 254 RCKCNGHASKCLLDTQGHLICDCRHGTEGPDCGRCKPFYCDRPWQRATAREAHACLACS- 312
Query: 312 YCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCV 370
CNGH C N L L SGG C++C ++T G C C
Sbjct: 313 -CNGHARRCRFNMELYRLS-GRRSGGV----------------CLNCRHNTAGRHCHYCR 354
Query: 371 EG 372
EG
Sbjct: 355 EG 356
>UNIPROTKB|F1MF86 [details] [associations]
symbol:LTBP2 "Latent-transforming growth factor
beta-binding protein 2" species:9913 "Bos taurus" [GO:0031012
"extracellular matrix" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005615 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 GO:GO:0031012 PROSITE:PS00010 InterPro:IPR009030
SUPFAM:SSF57184 GeneTree:ENSGT00700000104076 Gene3D:3.90.290.10
InterPro:IPR017878 Pfam:PF00683 SUPFAM:SSF57581 PROSITE:PS51364
IPI:IPI00718698 UniGene:Bt.5011 OMA:GRDECWC EMBL:DAAA02029614
Ensembl:ENSBTAT00000029274 Uniprot:F1MF86
Length = 1963
Score = 147 (56.8 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 55/171 (32%), Positives = 70/171 (40%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGG--ECVPV--CSQ-G-CV 235
C +NECL D C + +CV+ + C C GY + G EC + C Q G C
Sbjct: 998 CTDDNECLRD--PCKGRG-RCVNRVGSYSCFCYPGYKLATSGATQECQDIDECEQPGVCS 1054
Query: 236 RGVCSEPD---KCQCDFGYVGV---NCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQC 289
RG C+ + C+CD GY+ V +C +C C PD +C N C
Sbjct: 1055 RGRCTNTEGSYHCECDQGYIMVRKGHCQDINECRHPGTC--PDG-----KCVNSPGSYTC 1107
Query: 290 DKCEPLYVGDPRDNGECVPCSE-----YCNGHTGLCINASLASLPFSPESG 335
CE Y G G CV +E C H G CIN S S E G
Sbjct: 1108 LPCEEGYRGQ---GGSCVDVNECLTPGVCT-H-GTCINLE-GSFRCSCEQG 1152
Score = 124 (48.7 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 41/157 (26%), Positives = 65/157 (41%)
Query: 178 NYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CS--QG 233
N C +EC+ + + C P+ E C++ F C+C G+ ++ G C V C+
Sbjct: 1283 NGTVCEDVDECVGEEY-CAPRGE-CLNSHGSFFCLCADGFVSADGGTSCQDVDECAVTDR 1340
Query: 234 CVRGVCSEPD---KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCD 290
C+ G C D C C+ G+ S +C + G + + RC N +C
Sbjct: 1341 CLGGQCVNTDGSFNCVCETGFQPSPESGECVDIDECEDLG-EPICGAWRCENSPGSYRCV 1399
Query: 291 K-CEPLYVGDPRDNGECVPCSEYCN----GHTGLCIN 322
C+P + P G+C+ E N G G C N
Sbjct: 1400 LGCQPGFHMAP--TGDCIDIDECANDTVCGSHGFCDN 1434
Score = 124 (48.7 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 58/199 (29%), Positives = 82/199 (41%)
Query: 195 CDPQSEQCVDLADGFECVCGRGY--NKSE----EGGECV--PVCSQG-CVRGVCSEPDKC 245
C P + CV+L DG+ C+C GY + S+ + EC+ P +G CV V S C
Sbjct: 969 CGPGT--CVNLPDGYRCICSPGYRLHPSQAYCTDDNECLRDPCKGRGRCVNRVGSY--SC 1024
Query: 246 QCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLR--CHNHTKGPQCDKCEPLYVGDPRDN 303
C GY +C +C P VC R C N T+G +C+ Y+ +
Sbjct: 1025 FCYPGYKLATSGATQECQDIDECEQPG---VCSRGRCTN-TEGSYHCECDQGYIMVRK-- 1078
Query: 304 GECVPCSEYCNGHTGLCINASLASLPFS----P-ESGGTSELAAFLDEGPT-TRARCMH- 356
G C +E C H G C + + P S P E G + + +D T C H
Sbjct: 1079 GHCQDINE-CR-HPGTCPDGKCVNSPGSYTCLPCEEGYRGQGGSCVDVNECLTPGVCTHG 1136
Query: 357 -CGNHTTGPKCEDCVEGKE 374
C N +C C +G E
Sbjct: 1137 TCINLEGSFRCS-CEQGYE 1154
Score = 47 (21.6 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 16/52 (30%), Positives = 20/52 (38%)
Query: 39 SCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEAL--YCAGG 88
+C L QR Q C S G+ W S+ +C P EA C G
Sbjct: 791 TCALPLAQRITKQICCCSRVGKA------WGSLCEKCPLPGTEAFREICPAG 836
>UNIPROTKB|P35556 [details] [associations]
symbol:FBN2 "Fibrillin-2" species:9606 "Homo sapiens"
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=TAS]
[GO:0009653 "anatomical structure morphogenesis" evidence=TAS]
[GO:0030501 "positive regulation of bone mineralization"
evidence=ISS] [GO:0035583 "sequestering of TGFbeta in extracellular
matrix" evidence=ISS] [GO:0045669 "positive regulation of
osteoblast differentiation" evidence=ISS] [GO:0060346 "bone
trabecula formation" evidence=ISS] [GO:0001527 "microfibril"
evidence=TAS] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR011398 InterPro:IPR018097 Pfam:PF07645
PIRSF:PIRSF036312 PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179
SMART:SM00181 Reactome:REACT_118779 InterPro:IPR000152
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030326
GO:GO:0030501 GO:GO:0045669 PROSITE:PS01186 eggNOG:NOG12793
PROSITE:PS00010 GO:GO:0001527 InterPro:IPR026823 Pfam:PF12662
GO:GO:0005201 GO:GO:0060346 HOGENOM:HOG000231768 HOVERGEN:HBG005643
Gene3D:3.90.290.10 InterPro:IPR017878 PANTHER:PTHR24039:SF0
Pfam:PF00683 SUPFAM:SSF57581 PROSITE:PS51364 GO:GO:0035583
EMBL:U03272 EMBL:AK300440 EMBL:AC025169 EMBL:AC034235 EMBL:AC113387
EMBL:X62009 EMBL:AB209735 IPI:IPI00019439 IPI:IPI00930504
PIR:A54105 RefSeq:NP_001990.2 UniGene:Hs.519294
ProteinModelPortal:P35556 SMR:P35556 IntAct:P35556 STRING:P35556
PhosphoSite:P35556 DMDM:238054385 PaxDb:P35556 PRIDE:P35556
Ensembl:ENST00000262464 Ensembl:ENST00000508053 GeneID:2201
KEGG:hsa:2201 UCSC:uc003kuu.3 CTD:2201 GeneCards:GC05M127621
H-InvDB:HIX0005141 H-InvDB:HIX0137461 HGNC:HGNC:3604 HPA:CAB026401
HPA:HPA012853 MIM:121050 MIM:612570 neXtProt:NX_P35556 Orphanet:115
PharmGKB:PA28017 InParanoid:P35556 OMA:SGRNCID GenomeRNAi:2201
NextBio:8895 ArrayExpress:P35556 Bgee:P35556 CleanEx:HS_FBN2
Genevestigator:P35556 GermOnline:ENSG00000138829 Uniprot:P35556
Length = 2912
Score = 147 (56.8 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 84/348 (24%), Positives = 129/348 (37%)
Query: 8 YGMSGQVAYTLEP-RTVKTDANRTNIKLKTGSSCPLRCDQRTDCQDCLTSSGGEGGWHEC 66
Y S Y P R TD + I C +C +C + S G +
Sbjct: 1223 YQCSCNPGYQATPDRQGCTDIDECMIM---NGGCDTQCTNSEGSYEC-SCSEGYALMPDG 1278
Query: 67 RWSSMLNECIS-PSYEALYCAGGVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHCGW-- 123
R + ++EC + P C GG C + G ++ C A TC+ C
Sbjct: 1279 RSCADIDECENNPDI----CDGGQCTNIPGEYRC-LCYDGFMASMDMKTCIDVNECDLNS 1333
Query: 124 --CAL-QRDTTGGMGVCTXXXXXXXXXXXXXXT----CDILFYQTYPDQVIE-VNNNDSF 175
C + + T G +C T C+I + D +N SF
Sbjct: 1334 NICMFGECENTKGSFICHCQLGYSVKKGTTGCTDVDECEIGAHNC--DMHASCLNIPGSF 1391
Query: 176 S------W--NYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECV 227
W N +KC +EC N H C + QCV+ + C C G+ + +G C
Sbjct: 1392 KCSCREGWIGNGIKCIDLDECSNGTHQCSINA-QCVNTPGSYRCACSEGF--TGDGFTCS 1448
Query: 228 PV--CSQG---CVRGVC-SEPD--KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCL- 278
V C++ C G C + P +C+C+ G+ + S CQ +C+ + +C+
Sbjct: 1449 DVDECAENINLCENGQCLNVPGAYRCECEMGFTPASDSRSCQ--DIDECSFQN---ICVF 1503
Query: 279 -RCHNHTKGPQCDKCEPLYVGDPRDNGECVP---CSEYCNGHTGLCIN 322
C+N C C+ Y D R G C C++ N GLC+N
Sbjct: 1504 GTCNNLPGMFHCI-CDDGYELD-RTGGNCTDIDECADPINCVNGLCVN 1549
Score = 128 (50.1 bits), Expect = 0.00032, P = 0.00032
Identities = 52/210 (24%), Positives = 85/210 (40%)
Query: 172 NDSFSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV-- 229
++ F+ + C +EC + + C+ + QC+++ + C C G+ + + C +
Sbjct: 1437 SEGFTGDGFTCSDVDECAENINLCE--NGQCLNVPGAYRCECEMGFTPASDSRSCQDIDE 1494
Query: 230 CS-QG-CVRGVCSE-PDK--CQCDFGY----VGVNCSIQCQCNGHADCAGPDKLDVCLRC 280
CS Q CV G C+ P C CD GY G NC+ +C +C +C+
Sbjct: 1495 CSFQNICVFGTCNNLPGMFHCICDDGYELDRTGGNCTDIDECADPINCVN----GLCV-- 1548
Query: 281 HNHTKGP-QCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSE 339
+T G +C+ C P + +P G CV + G C L F P G+
Sbjct: 1549 --NTPGRYECN-CPPDFQLNPTGVG-CV------DNRVGNCY------LKFGPRGDGSLS 1592
Query: 340 LAAFLDEGPTTRARCMHCGNHTTGPKCEDC 369
+ G + + C G P CE C
Sbjct: 1593 CNTEIGVGVSRSSCCCSLGKAWGNP-CETC 1621
>UNIPROTKB|Q14162 [details] [associations]
symbol:SCARF1 "Scavenger receptor class F member 1"
species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
[GO:0030169 "low-density lipoprotein particle binding"
evidence=IDA] [GO:0006898 "receptor-mediated endocytosis"
evidence=TAS] [GO:0004888 "transmembrane signaling receptor
activity" evidence=TAS] [GO:0016021 "integral to membrane"
evidence=IDA] [GO:0005044 "scavenger receptor activity"
evidence=IDA] [GO:0006707 "cholesterol catabolic process"
evidence=IC] [GO:0010976 "positive regulation of neuron projection
development" evidence=ISS] [GO:0016322 "neuron remodeling"
evidence=ISS] [GO:0048680 "positive regulation of axon
regeneration" evidence=ISS] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 GO:GO:0016021 EMBL:CH471108 GO:GO:0006707
EMBL:AC130343 GO:GO:0016358 GO:GO:0016322 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 GO:GO:0048680 GO:GO:0004888
GO:GO:0030169 InterPro:IPR009030 SUPFAM:SSF57184 GO:GO:0005044
Pfam:PF12661 eggNOG:NOG284054 HOGENOM:HOG000015093 EMBL:D86864
EMBL:AB052946 EMBL:AB052947 EMBL:AB052948 EMBL:AB052949
EMBL:AB052950 EMBL:D63483 EMBL:BC039735 IPI:IPI00066367
IPI:IPI00169257 IPI:IPI00169258 IPI:IPI00337750 IPI:IPI00337751
RefSeq:NP_003684.2 RefSeq:NP_663325.1 RefSeq:NP_663327.2
UniGene:Hs.647430 ProteinModelPortal:Q14162 SMR:Q14162
STRING:Q14162 PhosphoSite:Q14162 DMDM:311033530 PaxDb:Q14162
PRIDE:Q14162 Ensembl:ENST00000263071 Ensembl:ENST00000348987
Ensembl:ENST00000434376 Ensembl:ENST00000571272 GeneID:8578
KEGG:hsa:8578 UCSC:uc002fsy.1 UCSC:uc002fsz.1 UCSC:uc010cjv.1
CTD:8578 GeneCards:GC17M001537 H-InvDB:HIX0013404 HGNC:HGNC:16820
HPA:HPA035108 MIM:607873 neXtProt:NX_Q14162 PharmGKB:PA38420
HOVERGEN:HBG099941 InParanoid:Q14162 OMA:GWWGPEC OrthoDB:EOG4S1T6G
GenomeRNAi:8578 NextBio:32179 ArrayExpress:Q14162 Bgee:Q14162
CleanEx:HS_SCARF1 Genevestigator:Q14162 GermOnline:ENSG00000074660
Uniprot:Q14162
Length = 830
Score = 135 (52.6 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 52/188 (27%), Positives = 66/188 (35%)
Query: 195 CDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPD-KCQCDFGYVG 253
C+ C D C C G+ G EC C CVRG CS +C C G+ G
Sbjct: 194 CNCHGSPCEQ--DSGRCACRPGW----WGPECQQQCE--CVRGRCSAASGECTCPPGFRG 245
Query: 254 VNCSIQCQCNGHA-DCAGPDKLDVCLRC-HNHTKGPQ---CDKCEPLYVGDPRDNGECVP 308
C + C H CA C RC HN P C+ CEP + G C+P
Sbjct: 246 ARCELPCPAGSHGVQCAHS-----CGRCKHNEPCSPDTGSCESCEPGWNGTQCQQ-PCLP 299
Query: 309 CS--EYCNGHTGLCINASLASLPFSPESGGTSEL-AAFLDEGPTTRARC-MHCGNHTTGP 364
+ E C C + P++G +L GP C G
Sbjct: 300 GTFGESCEQQCPHCRHGEACE----PDTGHCQRCDPGWL--GPRCEDPCPTGTFGEDCGS 353
Query: 365 KCEDCVEG 372
C CV+G
Sbjct: 354 TCPTCVQG 361
Score = 127 (49.8 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 42/141 (29%), Positives = 62/141 (43%)
Query: 196 DPQSEQ-CVDLADGFECVCGRGYNKSEEGGEC-VPVCS--QGCVRG-VCSEPDKCQCDFG 250
DP+ + CV + E C G+ + ++ EC +P+C C + VC +P C+C G
Sbjct: 23 DPKGQHVCVASSPSAELQCCAGWRQKDQ--ECTIPICEGPDACQKDEVCVKPGLCRCKPG 80
Query: 251 YVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNH------TKGPQCD------KCE-PLYV 297
+ G +CS +C GPD + C CH H T QC +CE P
Sbjct: 81 FFGAHCSSRCP----GQYWGPDCRESC-PCHPHGQCEPATGACQCQADRWGARCEFPCAC 135
Query: 298 GDPRDNGECVPCSEYCNGHTG 318
G P +G C P + C+ G
Sbjct: 136 G-P--HGRCDPATGVCHCEPG 153
Score = 51 (23.0 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 17/61 (27%), Positives = 21/61 (34%)
Query: 72 LNECISPSYEALYCAGGVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHCGWCALQRDTT 131
L C P + +C+ G GP CP C + QC G C Q D
Sbjct: 74 LCRC-KPGFFGAHCSSRCPGQYWGPDCRESCP--CHPHGQCEPAT-----GACQCQADRW 125
Query: 132 G 132
G
Sbjct: 126 G 126
Score = 45 (20.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 26/99 (26%), Positives = 36/99 (36%)
Query: 53 CLTSSGGEGGWHECRWSSMLN---ECISPSYEALYCA----GGVCGL--VLGPHQAPQC- 102
C + G+ +CR S + +C P+ A C G C GPH +C
Sbjct: 86 CSSRCPGQYWGPDCRESCPCHPHGQC-EPATGACQCQADRWGARCEFPCACGPHG--RCD 142
Query: 103 PRS----CSAYTQCSTCLRHAHCGWCALQRDTTGGMGVC 137
P + C STC R C A + + G VC
Sbjct: 143 PATGVCHCEPGWWSSTCRRPCQCNTAAARCEQATGACVC 181
>UNIPROTKB|F1MMT2 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042383 "sarcolemma" evidence=IEA] [GO:0032224
"positive regulation of synaptic transmission, cholinergic"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0007411 GO:GO:0030155 GO:GO:0007155 GO:GO:0042383
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GO:GO:0032224 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 OMA:NCNSFGS
EMBL:DAAA02026607 EMBL:DAAA02026593 EMBL:DAAA02026594
EMBL:DAAA02026595 EMBL:DAAA02026596 EMBL:DAAA02026597
EMBL:DAAA02026598 EMBL:DAAA02026599 EMBL:DAAA02026600
EMBL:DAAA02026601 EMBL:DAAA02026602 EMBL:DAAA02026603
EMBL:DAAA02026604 EMBL:DAAA02026605 EMBL:DAAA02026606
IPI:IPI00924129 Ensembl:ENSBTAT00000061257 Uniprot:F1MMT2
Length = 3085
Score = 147 (56.8 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 41/120 (34%), Positives = 51/120 (42%)
Query: 260 CQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRD--NGECVPCSEYCNGHT 317
CQC GHA+ D CL C +HT GP CDKC P + GDP + +C PC+ C
Sbjct: 720 CQCFGHAESCD-DTTGECLNCKDHTDGPYCDKCLPGFYGDPTKGTSDDCQPCA--CP--- 773
Query: 318 GLCINASLASLPFSPESGGTSELAAFLDEGPT--TRARCMHCGN------HTTGPKCEDC 369
+N+ S FSP L DE P + RC C G C+ C
Sbjct: 774 ---LNSP--SNNFSPTCHMDRSLGLICDECPVGYSGQRCERCAEGYFGQPSVPGGSCQPC 828
Score = 125 (49.1 bits), Expect = 0.00072, P = 0.00072
Identities = 44/154 (28%), Positives = 58/154 (37%)
Query: 229 VCSQGCVRGVCSEPDKCQ-CDFGYVGVNC----SIQ-CQCNGHADCAGPDKLDV----CL 278
+C + C G + +C+ C GY G S Q CQCN + D + P D CL
Sbjct: 794 ICDE-CPVGYSGQ--RCERCAEGYFGQPSVPGGSCQPCQCNDNLDFSIPGSCDSLSGSCL 850
Query: 279 RCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFSPE-SGGT 337
C T G C+ C Y GD D C PC NG +A P G
Sbjct: 851 ICKPGTTGRYCELCADGYFGDAVDAKNCQPCHCNANGSFSEVCHAQTGQCECKPNVQGRR 910
Query: 338 SELAAFLDEGPTTRARCMHCGNHTTGPKCEDCVE 371
+ G + C+ C ++ G K DC E
Sbjct: 911 CDECKPETFGLQSARGCIPCNCNSFGSKSFDCEE 944
>MGI|MGI:1918264 [details] [associations]
symbol:Megf9 "multiple EGF-like-domains 9" species:10090
"Mus musculus" [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001368
SMART:SM00208 MGI:MGI:1918264 GO:GO:0016021 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 CTD:1955 eggNOG:NOG302694
HOVERGEN:HBG080442 EMBL:AK035987 EMBL:AK039319 EMBL:AK052434
EMBL:AK122378 IPI:IPI00221701 RefSeq:NP_766282.1 UniGene:Mm.251188
ProteinModelPortal:Q8BH27 SMR:Q8BH27 STRING:Q8BH27
PhosphoSite:Q8BH27 PaxDb:Q8BH27 PRIDE:Q8BH27
Ensembl:ENSMUST00000107359 GeneID:230316 KEGG:mmu:230316
GeneTree:ENSGT00680000100051 HOGENOM:HOG000203602 InParanoid:Q8BH27
OMA:NGCLPCQ NextBio:379877 Bgee:Q8BH27 CleanEx:MM_MEGF9
Genevestigator:Q8BH27 GermOnline:ENSMUSG00000039270 Uniprot:Q8BH27
Length = 600
Score = 139 (54.0 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 38/132 (28%), Positives = 53/132 (40%)
Query: 208 GFEC-VCGRGYNKSEEGGECVPV-CS-QGCVRGVCSEPDKCQCDFGYVGVNCS------- 257
G C C G+ + G C+P CS G V +C+ CQC G G C
Sbjct: 230 GLHCDTCKEGFYLNHTVGLCLPCHCSPHGAVSILCNSSGNCQCKVGVTGSMCDKCQDGHY 289
Query: 258 -------IQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGEC--VP 308
+ CQCN +D CL C ++KG C++C+ + P +C P
Sbjct: 290 GFGKTGCLPCQCNNRSDSCDVHT-GACLNCQENSKGEHCEECKEGFYPSPDAAKQCHRCP 348
Query: 309 CSEYCNGHTGLC 320
CS + TG C
Sbjct: 349 CSAVTS--TGNC 358
>WB|WBGene00001403 [details] [associations]
symbol:fbl-1 species:6239 "Caenorhabditis elegans"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0030198 "extracellular
matrix organization" evidence=IMP] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0005201 "extracellular
matrix structural constituent" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR000020
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF07645 PROSITE:PS01177 PROSITE:PS01178 PROSITE:PS01187
PROSITE:PS50026 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0007275 GO:GO:0005578 GO:GO:0030198 GO:GO:0040017
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
eggNOG:NOG12793 PROSITE:PS00010 GO:GO:0005604 InterPro:IPR026823
Pfam:PF12662 GO:GO:0005201 EMBL:AF051401 EMBL:AF051402
EMBL:AF051403 EMBL:AF070477 EMBL:Z68219 EMBL:Z68749 PIR:T22793
PIR:T42760 PIR:T42990 PIR:T43210 RefSeq:NP_001023236.1
RefSeq:NP_001023237.1 RefSeq:NP_501694.2 UniGene:Cel.12816
ProteinModelPortal:O77469 SMR:O77469 DIP:DIP-26629N IntAct:O77469
MINT:MINT-117673 STRING:O77469 PaxDb:O77469 PRIDE:O77469
EnsemblMetazoa:F56H11.1c GeneID:177788 KEGG:cel:CELE_F56H11.1
UCSC:F56H11.1a.1 CTD:177788 WormBase:F56H11.1a WormBase:F56H11.1b
WormBase:F56H11.1c GeneTree:ENSGT00700000104076
HOGENOM:HOG000007079 InParanoid:O77469 OMA:MDSATEQ NextBio:898378
ArrayExpress:O77469 InterPro:IPR017048 PIRSF:PIRSF036313
Uniprot:O77469
Length = 728
Score = 146 (56.5 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 47/159 (29%), Positives = 68/159 (42%)
Query: 181 KCPPENECLN-DHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG---C 234
+C +EC+ H CD +E C++ FEC C G+ + +G C V C+ G C
Sbjct: 427 RCEDVDECIKFAGHVCDLSAE-CINTIGSFECKCKPGFQLASDGRRCEDVNECTTGIAAC 485
Query: 235 VRGVCSEPD--KCQCDFGYV----GVNCSIQCQCNGHADCAGPDKLDVCLR-CHNHTKGP 287
+ + P +C CD G+ G C +C+ A D+C+ C N TKG
Sbjct: 486 EQKCVNIPGSYQCICDRGFALGPDGTKCEDIDECSIWAGSGN----DLCMGGCIN-TKGS 540
Query: 288 QCDKCEPLYVGDPRDNGECVPCSEY----CNGHTGLCIN 322
+C P Y P D CV E C G +C+N
Sbjct: 541 YLCQCPPGYKIQP-DGRTCVDVDECAMGECAGSDKVCVN 578
Score = 37 (18.1 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 38 SSCPLRCDQRTDCQDCLTSSGG 59
+ C R T +DC+ + GG
Sbjct: 197 NECLTRQSPCTQSEDCVNTIGG 218
>UNIPROTKB|F1PJ02 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 OMA:EPFYWRL GO:GO:0005606
EMBL:AAEX03005489 EMBL:AAEX03005490 EMBL:AAEX03005491
Ensembl:ENSCAFT00000029520 Uniprot:F1PJ02
Length = 3034
Score = 131 (51.2 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 42/133 (31%), Positives = 62/133 (46%)
Query: 195 CDP-QSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVG 253
CDP S V + D + G +K ++ G+C P C +G C D+CQ FGY
Sbjct: 352 CDPFGSLSSVCIKDELQS----GLHKGKQPGQC-P-CKEGYAGEKC---DRCQ--FGYKA 400
Query: 254 VNCSIQCQCNGHADCAGPDKL-DVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSE- 311
I+C+C+ A D + CL C + +G CD C+P + N E CSE
Sbjct: 401 YPACIRCECS-RAGSVNEDPCSEPCL-CKENVEGDNCDLCKPGFYNLKERNPE--GCSEC 456
Query: 312 YCNGHTGLCINAS 324
+C G + +C + S
Sbjct: 457 FCFGVSDVCDSLS 469
Score = 130 (50.8 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 57/202 (28%), Positives = 74/202 (36%)
Query: 188 CLNDHHTCDPQSEQCVDLADGFEC-VCGRGYNKSEEGGECVPV-CS-QGCVRGVCSEPDK 244
C D CD C G +C C GY + G C+P CS G + C+E +
Sbjct: 867 CHLDTGLCD-----CKPHVTGQQCDQCLPGYYGLDTGLGCLPCNCSASGSMSDDCTEDGQ 921
Query: 245 CQCDFGYVGVNCSIQCQCNGHA---------DCA------GPDKLDVCLRCHNHTKGPQC 289
C C G G C +C +A DCA P+ C+ C HT+G C
Sbjct: 922 CHCLPGVAGEKCD-RCARGFYAYQDGGCTPCDCAHTQHTCDPES-GACI-CPPHTRGATC 978
Query: 290 DKCEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPT 349
D+CE Y G + G C C+ G +A P P GG S L G
Sbjct: 979 DQCEDGYWGHDLELG-CQACNCSAVGSASHGCDALTGHCPCKPAFGGLSCHQCSL--GYR 1035
Query: 350 TRARCMHCGNHTTGPKCEDCVE 371
C+ C G + C E
Sbjct: 1036 DFPDCVACDCDLRGTLADTCDE 1057
Score = 115 (45.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 20/54 (37%), Positives = 27/54 (50%)
Query: 258 IQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNG-ECVPCS 310
+ C CN H+D P+ CL C + T G CD C P Y G + +C PC+
Sbjct: 1354 VPCNCNNHSDACDPET-GKCLNCSHSTTGEHCDVCAPGYYGKVTGSASDCSPCA 1406
Score = 107 (42.7 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 40/138 (28%), Positives = 53/138 (38%)
Query: 182 CPPENECLNDHHTCDPQSEQCV--DLADGFEC-VCGRGY--NKSEEGGECVPVCSQGCVR 236
C P +C + HTCDP+S C+ G C C GY + E G + + G
Sbjct: 948 CTP-CDCAHTQHTCDPESGACICPPHTRGATCDQCEDGYWGHDLELGCQACNCSAVGSAS 1006
Query: 237 GVCSE-PDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKC--E 293
C C C + G++C QC G+ D PD C+ C +G D C E
Sbjct: 1007 HGCDALTGHCPCKPAFGGLSCH-QCSL-GYRDF--PD----CVACDCDLRGTLADTCDEE 1058
Query: 294 PLYVGDPRDNGECVPCSE 311
D G C C E
Sbjct: 1059 QGLCSCAEDTGTC-SCKE 1075
Score = 68 (29.0 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 32/119 (26%), Positives = 41/119 (34%)
Query: 16 YTLEPRTVKTDANRTNIKLKTGSS-----CPLRCDQRTDCQDCLTSSGGEGGWHE-CRWS 69
Y L R D R L T S+ C L C C + G G W E C
Sbjct: 730 YGLPSRGTPGDCQRCACPLSTTSNNFSPTCHLEAGDEVVCDQC--APGYSGSWCERCADG 787
Query: 70 SMLNECISPSYEALYCAGGVCGLVLGPHQAPQCPRSCSAYTQCSTCLRH---AHCGWCA 125
N + P + C C + P +A C S +C C+ + AHC CA
Sbjct: 788 YYGNPTV-PGESCVPCN---CSGNVDPFEAGHCD---SVTGECLKCIGNTDGAHCERCA 839
Score = 61 (26.5 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 348 PTTRARCMHCGNHTTGPKCEDCVEG 372
P T +C++C + TTG C+ C G
Sbjct: 1367 PET-GKCLNCSHSTTGEHCDVCAPG 1390
Score = 57 (25.1 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 354 CMHCGNHTTGPKCEDCVEGKENRQSR 379
C C ++TTG CE C G SR
Sbjct: 710 CSVCKHNTTGDHCEQCAPGFYGLPSR 735
Score = 45 (20.9 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 353 RCMHCGNHTTGPKCEDCVEG 372
+C+ C T G C+DC G
Sbjct: 1314 KCL-CPPGTAGFSCQDCAPG 1332
>UNIPROTKB|F1MTZ4 [details] [associations]
symbol:Bt.110891 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0060346 "bone trabecula formation" evidence=IEA]
[GO:0045669 "positive regulation of osteoblast differentiation"
evidence=IEA] [GO:0035583 "sequestering of TGFbeta in extracellular
matrix" evidence=IEA] [GO:0030501 "positive regulation of bone
mineralization" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR011398 InterPro:IPR018097 Pfam:PF07645
PIRSF:PIRSF036312 PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 GO:GO:0005578 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030326 GO:GO:0030501
GO:GO:0045669 PROSITE:PS01186 PROSITE:PS00010 InterPro:IPR026823
Pfam:PF12662 GO:GO:0005201 GO:GO:0060346
GeneTree:ENSGT00700000104076 Gene3D:3.90.290.10 InterPro:IPR017878
PANTHER:PTHR24039:SF0 Pfam:PF00683 SUPFAM:SSF57581 PROSITE:PS51364
GO:GO:0035583 EMBL:DAAA02019770 EMBL:DAAA02019764 EMBL:DAAA02019765
EMBL:DAAA02019766 EMBL:DAAA02019767 EMBL:DAAA02019768
EMBL:DAAA02019769 IPI:IPI00696214 Ensembl:ENSBTAT00000020360
OMA:CNNTEGG Uniprot:F1MTZ4
Length = 3672
Score = 147 (56.8 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 84/348 (24%), Positives = 129/348 (37%)
Query: 8 YGMSGQVAYTLEP-RTVKTDANRTNIKLKTGSSCPLRCDQRTDCQDCLTSSGGEGGWHEC 66
Y S Y P R TD + I C +C +C + S G +
Sbjct: 1977 YQCSCNPGYQATPDRQGCTDIDECMIM---NGGCDTQCTNAEGSYEC-SCSEGYALMPDG 2032
Query: 67 RWSSMLNECIS-PSYEALYCAGGVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHCGW-- 123
R + ++EC + P C GG C + G ++ C A TC+ C
Sbjct: 2033 RSCADIDECENNPDI----CDGGQCTNIPGEYRC-LCYDGFMASMDMKTCIDVNECDLNS 2087
Query: 124 --CAL-QRDTTGGMGVCTXXXXXXXXXXXXXXT----CDILFYQTYPDQVIE-VNNNDSF 175
C + + T G +C T C+I + D +N SF
Sbjct: 2088 NICMFGECENTKGSFICHCQLGYSVKKGTTGCTDVDECEIGAHNC--DMHASCLNVPGSF 2145
Query: 176 S------W--NYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECV 227
W N +KC +EC N H C + QCV+ + C C G+ + +G C
Sbjct: 2146 KCSCREGWVGNGIKCIDLDECSNGTHQCSINA-QCVNTPGSYRCACSEGF--TGDGFTCS 2202
Query: 228 PV--CSQG---CVRGVC-SEPD--KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCL- 278
V C++ C G C + P +C+C+ G+ + S CQ +C+ + +C+
Sbjct: 2203 DVDECAENINLCENGQCLNVPGAYRCECEMGFTPASDSRSCQ--DIDECSFQN---ICVF 2257
Query: 279 -RCHNHTKGPQCDKCEPLYVGDPRDNGECVP---CSEYCNGHTGLCIN 322
C+N C C+ Y D R G C C++ N GLC+N
Sbjct: 2258 GTCNNLPGMFHCI-CDDGYELD-RTGGNCTDIDECADPINCVNGLCVN 2303
Score = 128 (50.1 bits), Expect = 0.00041, P = 0.00041
Identities = 52/210 (24%), Positives = 85/210 (40%)
Query: 172 NDSFSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV-- 229
++ F+ + C +EC + + C+ + QC+++ + C C G+ + + C +
Sbjct: 2191 SEGFTGDGFTCSDVDECAENINLCE--NGQCLNVPGAYRCECEMGFTPASDSRSCQDIDE 2248
Query: 230 CS-QG-CVRGVCSE-PDK--CQCDFGY----VGVNCSIQCQCNGHADCAGPDKLDVCLRC 280
CS Q CV G C+ P C CD GY G NC+ +C +C +C+
Sbjct: 2249 CSFQNICVFGTCNNLPGMFHCICDDGYELDRTGGNCTDIDECADPINCVN----GLCV-- 2302
Query: 281 HNHTKGP-QCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSE 339
+T G +C+ C P + +P G CV + G C L F P G+
Sbjct: 2303 --NTPGRYECN-CPPDFQLNPTGVG-CV------DNRVGNCY------LKFGPRGDGSLS 2346
Query: 340 LAAFLDEGPTTRARCMHCGNHTTGPKCEDC 369
+ G + + C G P CE C
Sbjct: 2347 CNTEIGVGVSRSSCCCSLGKAWGNP-CETC 2375
>UNIPROTKB|F1RHK7 [details] [associations]
symbol:PEAR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043654 "recognition of apoptotic cell" evidence=IEA]
[GO:0001891 "phagocytic cup" evidence=IEA] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 Pfam:PF12661
GeneTree:ENSGT00690000101691 GO:GO:0043654 CTD:375033 OMA:PPGTWGF
EMBL:CU151867 RefSeq:XP_001929552.1 UniGene:Ssc.28869
Ensembl:ENSSSCT00000007080 GeneID:100156908 KEGG:ssc:100156908
Uniprot:F1RHK7
Length = 1038
Score = 145 (56.1 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 39/121 (32%), Positives = 52/121 (42%)
Query: 213 CGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQC-------QCNGH 265
C +G+ +S G CVP+CSQ CV G C P++CQC + G +CS C QC+
Sbjct: 90 CCQGFYESR--GACVPLCSQECVHGRCVAPNQCQCVQDWRGDDCSSACAPGVWGPQCDKP 147
Query: 266 ADCAGPDKLD----VCLRCHNHTKGPQC-DKCEPLYVGDPRDNGECVPCSEYCNGHTGLC 320
+C D C C + P C C P G P C C+ TG C
Sbjct: 148 CNCGNSSSCDPKSGAC-SCPPGLQPPHCLQPCSPGRYG-PACQYSCQCHRAPCDPQTGAC 205
Query: 321 I 321
+
Sbjct: 206 L 206
Score = 123 (48.4 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 44/156 (28%), Positives = 59/156 (37%)
Query: 176 SWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVC----S 231
+W + C +C + C PQ+ C C K + G C C S
Sbjct: 485 TWGF-NCNASCQCAHGA-ACSPQTGACTCTPGWHGAHCQLPCPKGQFGEGCASHCDCDHS 542
Query: 232 QGC--VRGVCS-----EPDKCQ--CDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHN 282
GC V G C +C C G+ G NCS C C C P+ + C+ C
Sbjct: 543 DGCDPVHGRCHCQAGWTGTRCHLPCPEGFWGTNCSNTCTCKNGGTCI-PENGN-CV-CAP 599
Query: 283 HTKGPQCDK-CEPLYVGDPRDNGECVPCSEYCNGHT 317
+GP C + C+P G R CVPC C H+
Sbjct: 600 GFRGPSCQRPCQP---G--RYGKRCVPCK--CANHS 628
Score = 117 (46.2 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 47/160 (29%), Positives = 60/160 (37%)
Query: 177 WNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECV-CGRGYNKSEEGGECVPV-CSQ-- 232
W C C N TC P++ CV A GF C R G CVP C+
Sbjct: 572 WG-TNCSNTCTCKNGG-TCIPENGNCV-CAPGFRGPSCQRPCQPGRYGKRCVPCKCANHS 628
Query: 233 GC--VRGVC------SEPDKCQ-CDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNH 283
C G C + PD Q C G+ G NC+ CQC C D C C
Sbjct: 629 SCHPSNGTCYCLAGWTGPDCSQPCPLGHWGANCAQLCQCRHGGTCHPQD--GSCF-CPPG 685
Query: 284 TKGPQC-DKCEP-LYVGDPRDNGECVPCSEYCNGHTGLCI 321
G C + C P ++ + +C E C+ TG C+
Sbjct: 686 WIGHLCLEGCPPGMFGANCSQPCQC-GSGERCHPETGACV 724
Score = 104 (41.7 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 36/123 (29%), Positives = 48/123 (39%)
Query: 181 KCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRG-VC 239
+C P +C N H +C P + C LA C + G C +C C G C
Sbjct: 618 RCVP-CKCAN-HSSCHPSNGTCYCLAGWTGPDCSQPCPLGHWGANCAQLCQ--CRHGGTC 673
Query: 240 SEPD-KCQCDFGYVGVNCSIQCQCNGH-ADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYV 297
D C C G++G C C A+C+ P + RCH T C C P +
Sbjct: 674 HPQDGSCFCPPGWIGHLCLEGCPPGMFGANCSQPCQCGSGERCHPETGA--C-VCPPGHS 730
Query: 298 GDP 300
G P
Sbjct: 731 GAP 733
Score = 65 (27.9 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 37/128 (28%), Positives = 50/128 (39%)
Query: 7 LYGMSGQVAYTLEPRTVKT----DANRTNIKLKTGSSCPLRCDQRTD---CQD-CLTSSG 58
LYG+S QV T +P + + + G C C Q T CQ+ CL G
Sbjct: 354 LYGLSCQVPCTCDPEHSFSCHPMSGECSCLPGWAGLHCNESCPQDTHGPGCQEHCLCLHG 413
Query: 59 GEGGWHECRWSSMLNECISPSYEALYCAGGVCGL-VLGPHQAPQCPRSCSAYTQCSTCLR 117
G C+ S L C +P Y +CA +C G + + +C SC CS
Sbjct: 414 GV-----CQPDSGLCRC-APGYTGPHCAS-LCPPDSYGVNCSSRC--SCENAIACSPVDG 464
Query: 118 HAHC--GW 123
C GW
Sbjct: 465 ACICKEGW 472
Score = 54 (24.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 24/96 (25%), Positives = 33/96 (34%)
Query: 38 SSCP-----LRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGL 92
S CP + C R C++ + S +G C+ C P C G G
Sbjct: 436 SLCPPDSYGVNCSSRCSCENAIACSPVDGACI-CKEGWQRGNCSIP------CPPGTWGF 488
Query: 93 VLGPHQAPQCPR--SCSAYTQCSTCLRHAHCGWCAL 126
+ + QC +CS T TC H C L
Sbjct: 489 --NCNASCQCAHGAACSPQTGACTCTPGWHGAHCQL 522
Score = 39 (18.8 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 76 ISPSYEALYCAGGVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAH 120
+SP +L GL G P+ P +CS + +T + +H
Sbjct: 1 MSPPLRSLLLLALALGLA-GTLN-PKDPNTCSFWESFTTTTKESH 43
>UNIPROTKB|F1LYF9 [details] [associations]
symbol:Ntng1 "Protein Ntng1" species:10116 "Rattus
norvegicus" [GO:0007409 "axonogenesis" evidence=IEA] [GO:0046658
"anchored to plasma membrane" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 RGD:1563465 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 IPI:IPI00565565 Ensembl:ENSRNOT00000050140
ArrayExpress:F1LYF9 Uniprot:F1LYF9
Length = 412
Score = 136 (52.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 35/111 (31%), Positives = 53/111 (47%)
Query: 259 QCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTG 318
+C+CN HA D + C ++T GP C KC+ Y G P G +P + G
Sbjct: 214 RCKCNLHATMCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPK---GTAN 270
Query: 319 LCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDC 369
CI S++S+ + E G S +++D T C+ C ++T G CE C
Sbjct: 271 TCI-PSISSIG-NCECFGHSNRCSYIDLLNTVI--CVSCKHNTRGQHCELC 317
>UNIPROTKB|Q22C74 [details] [associations]
symbol:TTHERM_01075660 "Putative uncharacterized protein"
species:312017 "Tetrahymena thermophila SB210" [GO:0004252
"serine-type endopeptidase activity" evidence=ISS]
InterPro:IPR000742 SMART:SM00181 GO:GO:0004252 InterPro:IPR015500
PANTHER:PTHR10795 InterPro:IPR006212 InterPro:IPR009030
SMART:SM00261 SUPFAM:SSF57184 Gene3D:2.40.40.10 InterPro:IPR014733
InterPro:IPR009009 SUPFAM:SSF50685 ProtClustDB:CLSZ2499145
EMBL:GG662480 RefSeq:XP_001030545.1 ProteinModelPortal:Q22C74
EnsemblProtists:EAR82882 GeneID:7834210 KEGG:tet:TTHERM_01075660
Uniprot:Q22C74
Length = 820
Score = 140 (54.3 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 84/365 (23%), Positives = 116/365 (31%)
Query: 36 TGSSCPLRCDQRTDCQDCLTSSGG----EGGWHECRWSSMLNECISPSYEALYCAGGVCG 91
T S CP C T C T + G C + C+S + C V G
Sbjct: 413 TCSKCPSNCTSCTSNSSCQTCTDNYVLISGSCQPCN-----SPCLSCKTDTNTCTSCVKG 467
Query: 92 LVLGPHQAP-QCPRSCSAY------TQCSTC-----LRHAHCGWCALQRDTTGGMGVCTX 139
L + C +C TQC++C L + G C + CT
Sbjct: 468 YTLNGNTCQASCDSTCKTCSKTQDATQCTSCNTGFYLNGTNVGSCV---QCSSNCSSCTS 524
Query: 140 XXXXXXXXXXXXXTCDILFYQTYPDQVIE--VNNNDSFSWNYVKCPPENECL-NDHHTCD 196
T P Q + V N S Y N C ++ C
Sbjct: 525 QNSCQTCTNNTILVSGQCQSCTSPCQTCQTSVTNCQSCVQGYTL--NGNTCTASNTGNCH 582
Query: 197 PQSEQCVDLADGFECV-CGRGYNKSEEGGECVPVCSQGCVRGVCS-EPDKC-QC--DFGY 251
P + C D C C GY GG C P C + C CS P+ C C ++
Sbjct: 583 PSCQTCSKPNDQNSCTSCPTGYLVL--GGNCQP-CQKPCQN--CSGNPNSCTSCIANYSL 637
Query: 252 VGVNC--SIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEP--LYVGDPRDNGECV 307
G C S Q Q H C C H+ C C L +G NG C
Sbjct: 638 SGNTCVGSNQDQTQCHPSCK------TCSVQHDQNA---CTSCFDGFLILG----NGNCQ 684
Query: 308 PCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCE 367
PC C +G N + + ++ ++G S++ L + + C C C
Sbjct: 685 PCQPPCFNCSGNPNNCTACASGYAVQNGTCSKI---LSDNSQCNSTCQTCTQANNANACA 741
Query: 368 DCVEG 372
C+ G
Sbjct: 742 TCMNG 746
>ZFIN|ZDB-GENE-060119-1 [details] [associations]
symbol:lama2 "laminin, alpha 2" species:7955 "Danio
rerio" [GO:0030155 "regulation of cell adhesion" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0045995 "regulation of embryonic development" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0060538 "skeletal muscle organ
development" evidence=IMP] [GO:0016203 "muscle attachment"
evidence=IGI;IMP] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 ZFIN:ZDB-GENE-060119-1 GO:GO:0030155
GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0016203 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
EMBL:JN786913 Uniprot:G8IHT9
Length = 3124
Score = 146 (56.5 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 50/181 (27%), Positives = 76/181 (41%)
Query: 198 QSEQCVDLADGFE-CVCGRGYNKSEEGGECVPVCSQGCVR-GVCSEPDKCQCDFGYVGVN 255
++ Q ++A E CVC +GY G C C+ G R V + + FG +
Sbjct: 1343 RASQDSEIAHQIEKCVCPQGY----AGLSCEE-CAAGFYRLSVLAGGSASRAGFG----S 1393
Query: 256 CSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRD-NGECVPCSEYCN 314
C ++CQCNGH+D P+ +C C ++T G +C++C + G R +C PC+ C
Sbjct: 1394 C-VRCQCNGHSDSCDPET-SICQNCQHNTVGDKCERCAAGFYGVVRGFTDDCKPCA--CP 1449
Query: 315 GHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHC--GNH----TTGPKCED 368
+N P G EG + C C G H G +CE+
Sbjct: 1450 -----LLNPENNFSPTCQTEGFNEYRCTACPEGYEGK-HCERCAPGFHGDPGVLGGRCEE 1503
Query: 369 C 369
C
Sbjct: 1504 C 1504
Score = 143 (55.4 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 53/162 (32%), Positives = 66/162 (40%)
Query: 227 VPVCSQGCVRGVCSEPDKCQ-CDFGYVGVNCSIQ------CQCNGHAD-CAGPDKLDVCL 278
V VC C G + C+ C GY VN +I CQC+GH + C D CL
Sbjct: 706 VEVCQ--CPPGY--DGTSCEMCALGYRRVNGTIYQGVCELCQCHGHTERC--DDLTGHCL 759
Query: 279 RCHNHTKGPQCDKCEPLYVGDP-RDNGE-CVPCSEYCNGHTGLCINASLASLPFSPESGG 336
C +HT GP C +C P Y GD R + C PC+ C S A+ FSP
Sbjct: 760 GCRDHTVGPNCGQCAPGYYGDATRGTADDCQPCA---------CPLLSPAN-NFSPTCRV 809
Query: 337 TSELAAFLDEGPT--TRARCMHCGN------HTTGPKCEDCV 370
D P T +RC C N + G C+ CV
Sbjct: 810 DGRGEVICDRCPPGYTGSRCDRCSNGYFGRPNIPGGSCQPCV 851
Score = 132 (51.5 bits), Expect = 0.00013, P = 0.00013
Identities = 49/183 (26%), Positives = 66/183 (36%)
Query: 195 CDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGV 254
C +E+C DL C+ R + G+C P RG + C C
Sbjct: 744 CHGHTERCDDLTG--HCLGCRDHTVGPNCGQCAPGYYGDATRGTADDCQPCACPLLSPAN 801
Query: 255 NCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPR-DNGECVPCSEYC 313
N S C+ +G + +C RC G +CD+C Y G P G C PC C
Sbjct: 802 NFSPTCRVDGRGEV-------ICDRCPPGYTGSRCDRCSNGYFGRPNIPGGSCQPC--VC 852
Query: 314 NGHTGL-----CINASLASLPFSPESGGTS-ELAAFLDEGPTTRAR-CMHCGNHTTGPKC 366
+G+ C + A L GG E A G A+ C C H+ G
Sbjct: 853 SGNLDQTAPLSCDPLTGACLRCRKGYGGADCERCADGYFGDALIAKNCQACQCHSNGSVS 912
Query: 367 EDC 369
E C
Sbjct: 913 ELC 915
>MGI|MGI:99916 [details] [associations]
symbol:Lamb2 "laminin, beta 2" species:10090 "Mus musculus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=IGI] [GO:0005178 "integrin binding" evidence=IPI]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005604
"basement membrane" evidence=ISO;IDA] [GO:0005605 "basal lamina"
evidence=IDA] [GO:0005608 "laminin-3 complex" evidence=ISO;IDA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IGI] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0007601 "visual perception"
evidence=IGI] [GO:0014002 "astrocyte development" evidence=IGI]
[GO:0014044 "Schwann cell development" evidence=IDA] [GO:0031175
"neuron projection development" evidence=IDA] [GO:0043256 "laminin
complex" evidence=IDA] [GO:0045202 "synapse" evidence=IDA]
[GO:0048677 "axon extension involved in regeneration" evidence=IMP]
[GO:0050808 "synapse organization" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IGI] [GO:0072249
"metanephric glomerular visceral epithelial cell development"
evidence=IMP] [GO:0072274 "metanephric glomerular basement membrane
development" evidence=IMP] MGI:MGI:99916 GO:GO:0007411
GO:GO:0007528 GO:GO:0007601 GO:GO:0007155 GO:GO:0045202
PROSITE:PS00022 GO:GO:0060041 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
EMBL:CH466560 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
eggNOG:NOG241384 HOGENOM:HOG000007552 GeneTree:ENSGT00620000087753
InterPro:IPR013015 PROSITE:PS51116 HOVERGEN:HBG052301 CTD:3913
KO:K06243 OMA:QPYCIVS OrthoDB:EOG4KSPHW ChiTaRS:LAMB2 GO:GO:0048677
GO:GO:0072274 GO:GO:0072249 EMBL:U43541 EMBL:U42624 EMBL:BC026051
EMBL:X75928 IPI:IPI00119065 PIR:I48749 RefSeq:NP_032509.2
UniGene:Mm.425599 ProteinModelPortal:Q61292 SMR:Q61292
STRING:Q61292 PhosphoSite:Q61292 PaxDb:Q61292 PRIDE:Q61292
Ensembl:ENSMUST00000065014 GeneID:16779 KEGG:mmu:16779
InParanoid:Q8R0Y0 NextBio:290628 Bgee:Q61292 CleanEx:MM_LAMB2
Genevestigator:Q61292 GermOnline:ENSMUSG00000052911 Uniprot:Q61292
Length = 1799
Score = 137 (53.3 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 45/149 (30%), Positives = 59/149 (39%)
Query: 181 KCPPENECLNDHHTCDPQSEQCVDLAD--GFEC-VCGRGYNKSEEGGECVPVCS-QGCVR 236
+C P+ ++ C P QC G C VC GY G CS G +
Sbjct: 785 QCDPQGSLSSE---CSPHGGQCRCKPGVVGRRCDVCATGYYGFGPAGCQACQCSPDGALS 841
Query: 237 GVCSEPD-KCQCDFGYVGVNCS-IQ-----------CQCNGHAD-CAGPDKLDVCLRCHN 282
+C +C C G G+ C Q C CNG AD C CL C +
Sbjct: 842 ALCEGTSGQCPCRPGAFGLRCDHCQRGQWGFPNCRPCVCNGRADEC--DTHTGACLGCRD 899
Query: 283 HTKGPQCDKCEPLYVGDPR--DNGECVPC 309
+T G C++C + GDPR G+C PC
Sbjct: 900 YTGGEHCERCIAGFHGDPRLPYGGQCRPC 928
Score = 120 (47.3 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 49/170 (28%), Positives = 66/170 (38%)
Query: 211 CVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAG 270
C C GY G C + C G +P K G C + C+C+G+ D
Sbjct: 955 CQCREGYT----GLRC-----EACAPGHFGDPSK-------PGGRCQL-CECSGNIDPMD 997
Query: 271 PDKLDV----CLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCN--G-HTGLCINA 323
PD D CLRC ++T+GP C C+P + G C C+ CN G C +
Sbjct: 998 PDACDPHTGQCLRCLHNTEGPHCGYCKPGFHGQAARQS-CHRCT--CNLLGTDPRRCPST 1054
Query: 324 SLASLPFSPESGGTSELAAFLDEGPTTRARCMHCG----NHTTGPKCEDC 369
L P +G L +G C HC N T+G C+ C
Sbjct: 1055 DLCHC--DPSTGQCPCLPHV--QG----LNCDHCAPNFWNFTSGRGCQPC 1096
Score = 55 (24.4 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 348 PTTRARCMHCGNHTTGPKCEDCVEGKENRQSR 379
P T +C+ C ++T GP C C G + +R
Sbjct: 1003 PHT-GQCLRCLHNTEGPHCGYCKPGFHGQAAR 1033
Score = 53 (23.7 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 27/93 (29%), Positives = 31/93 (33%)
Query: 50 CQDCLTSSGGEG--GWHECRWS--SMLNECISPSYEALYCAGGVCGLVL-----GPHQAP 100
C C T G G G C+ S L+ + C G GL G P
Sbjct: 814 CDVCATGYYGFGPAGCQACQCSPDGALSALCEGTSGQCPCRPGAFGLRCDHCQRGQWGFP 873
Query: 101 QCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGG 133
C R C + C H G C RD TGG
Sbjct: 874 NC-RPCVCNGRADEC--DTHTGACLGCRDYTGG 903
>ZFIN|ZDB-GENE-990415-173 [details] [associations]
symbol:notch1a "notch homolog 1a" species:7955
"Danio rerio" [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA;IGI] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050793 "regulation of developmental process" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0031017 "exocrine pancreas development" evidence=IMP]
[GO:0001756 "somitogenesis" evidence=IGI;IMP] [GO:0021986 "habenula
development" evidence=IMP] [GO:0007368 "determination of left/right
symmetry" evidence=IMP] [GO:0048699 "generation of neurons"
evidence=IMP] [GO:0021523 "somatic motor neuron differentiation"
evidence=IMP] [GO:0009952 "anterior/posterior pattern
specification" evidence=IMP] [GO:0048259 "regulation of
receptor-mediated endocytosis" evidence=IGI] [GO:0055016 "hypochord
development" evidence=IMP] [GO:0042663 "regulation of endodermal
cell fate specification" evidence=IMP] [GO:0048337 "positive
regulation of mesodermal cell fate specification" evidence=IMP]
[GO:0031016 "pancreas development" evidence=IMP] [GO:0001840
"neural plate development" evidence=IGI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0021531 "spinal cord radial
glial cell differentiation" evidence=IMP] [GO:0048936 "peripheral
nervous system neuron axonogenesis" evidence=IGI]
InterPro:IPR002110 InterPro:IPR000742 InterPro:IPR000800
InterPro:IPR001881 InterPro:IPR008297 InterPro:IPR010660
InterPro:IPR011656 InterPro:IPR018097 InterPro:IPR022362
Pfam:PF00008 Pfam:PF00023 Pfam:PF00066 Pfam:PF06816 Pfam:PF07645
Pfam:PF07684 PIRSF:PIRSF002279 PRINTS:PR01452 PRINTS:PR01984
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258
SMART:SM00004 SMART:SM00179 SMART:SM00181 SMART:SM00248
InterPro:IPR000152 ZFIN:ZDB-GENE-990415-173 GO:GO:0016021
GO:GO:0006355 eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0007219 GO:GO:0005509
GO:GO:0004872 GO:GO:0006351 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0001756 GO:GO:0007368 PROSITE:PS01186 InterPro:IPR003645
SMART:SM00274 PROSITE:PS00010 GO:GO:0048259 InterPro:IPR019931
TIGRFAMs:TIGR01167 Pfam:PF12661 GO:GO:0031017 GO:GO:0021523
GO:GO:0001840 GO:GO:0042663 SUPFAM:SSF90193 GO:GO:0048936
GO:GO:0055016 EMBL:X69088 IPI:IPI00483779 PIR:S42612
RefSeq:NP_571516.1 UniGene:Dr.137595 UniGene:Dr.75753
ProteinModelPortal:P46530 SMR:P46530 STRING:P46530 GeneID:30718
KEGG:dre:30718 CTD:30718 HOGENOM:HOG000234369 HOVERGEN:HBG052650
KO:K02599 NextBio:20807067 GO:GO:0021986 GO:GO:0048337
GO:GO:0021531 InterPro:IPR024600 Pfam:PF11936 Uniprot:P46530
Length = 2437
Score = 133 (51.9 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 60/210 (28%), Positives = 82/210 (39%)
Query: 181 KCPPE-NECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECV---PVC-SQGCV 235
+C + NEC ++ C + C+D GF C+C GY EG C C SQ C+
Sbjct: 447 RCEMDVNECKSN--PCQNDAT-CLDQIGGFHCICMPGY----EGVFCQINSDDCASQPCL 499
Query: 236 RGVCSEPDK---CQCDFGYVGVNCSI---QCQ---CNGHADCA-GPDKLDVCLRCHNHTK 285
G C + C+C G+ G C + +C C A C GP+K C C
Sbjct: 500 NGKCIDKINSFHCECPKGFSGSLCQVDVDECASTPCKNGAKCTDGPNKY-TC-ECTPGFS 557
Query: 286 GPQCD----KC--EPLYVGDPRDNGECVPCSEYCN-GHTGLCINASLASLPFSP-ESGGT 337
G C+ +C P + G RD C C G+TG ++ P +GGT
Sbjct: 558 GIHCELDINECASSPCHYGVCRDGVASFTCD--CRPGYTGRLCETNINECLSQPCRNGGT 615
Query: 338 SELAAFLDEGPTTRARCMHCGNHTTGPKCE 367
+ D A C TTG CE
Sbjct: 616 CQ-----DR---ENAYICTCPKGTTGVNCE 637
Score = 131 (51.2 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 47/149 (31%), Positives = 59/149 (39%)
Query: 181 KCPPE-NECLNDHHTCDPQ-SEQCVDLADGFECVCGRGYN--KSE---EGGECVPVCSQG 233
+C + NECL+D CDP S CV L + F C C GY + E G + P C G
Sbjct: 1261 RCEGDVNECLSD--PCDPSGSYNCVQLINDFRCECRTGYTGKRCETVFNGCKDTP-CKNG 1317
Query: 234 CVRGVCSEPDK---CQCDFGYVGVNC---SIQC---QCNGHADCAGPDKLDVCLRCHNHT 284
V S C+C GY G +C S C +C A C CL C
Sbjct: 1318 GTCAVASNTKHGYICKCQPGYSGSSCEYDSQSCGSLRCRNGATCVSGHLSPRCL-CAPGF 1376
Query: 285 KGPQCDKC--EPLYVGDPRDNGECVPCSE 311
G +C P V + G C P S+
Sbjct: 1377 SGHECQTRMDSPCLVNPCYNGGTCQPISD 1405
Score = 64 (27.6 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 24/79 (30%), Positives = 34/79 (43%)
Query: 36 TGSSCPLRCD--QRTDCQD---CLTSSGGEG-----GWHECRWSSMLNECISPSYEALYC 85
TGS C + D Q CQ+ C GG G+H S +NEC+S +
Sbjct: 1136 TGSYCQEQVDECQPNPCQNGATCTDYLGGYSCECVPGYHGMNCSKEINECLSQPCQN--- 1192
Query: 86 AGGVCGLVLGPHQAPQCPR 104
GG C ++ ++ CPR
Sbjct: 1193 -GGTCIDLVNTYKC-SCPR 1209
Score = 49 (22.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 18/69 (26%), Positives = 27/69 (39%)
Query: 60 EGGWHECRWSSMLNECIS-PSYEALYC----AGGVCGLVLGPHQAPQCPRSCSAYTQCST 114
E GW +NEC+S P C +G +C G P C + + +C++
Sbjct: 740 EAGWMGRNCDININECLSNPCVNGGTCKDMTSGYLCTCRAG-FSGPNCQMNIN---ECAS 795
Query: 115 --CLRHAHC 121
CL C
Sbjct: 796 NPCLNQGSC 804
>UNIPROTKB|I3L701 [details] [associations]
symbol:I3L701 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] InterPro:IPR000742 InterPro:IPR011398 PROSITE:PS50026
SMART:SM00181 GO:GO:0005578 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 GO:GO:0005201 PANTHER:PTHR24039:SF0
EMBL:CU468430 Ensembl:ENSSSCT00000028009
GeneTree:ENSGT00580000082028 Uniprot:I3L701
Length = 209
Score = 128 (50.1 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 34/110 (30%), Positives = 47/110 (42%)
Query: 197 PQSEQCV------DLADGF-----ECVCGRGYNKSEEGGECVPVCSQGCVRG-VCSEPDK 244
P QC+ DGF C C G G + + CS C+ G C++ D
Sbjct: 105 PGGNQCIVPICRNSCGDGFCSRPNMCTCSSGQISPTCGSKSIQQCSVRCMNGGTCAD-DH 163
Query: 245 CQCDFGYVGVNCSIQ-CQ--CNGHADCAGPDKLDVCLRCHNHTKGPQCDK 291
CQC GY+G C C+ C C GP++ C + T GPQC++
Sbjct: 164 CQCQKGYIGTYCGQPVCENGCQNGGRCIGPNR---CACVYGFT-GPQCER 209
>UNIPROTKB|F1RKL7 [details] [associations]
symbol:MEGF10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0055001 "muscle cell development" evidence=IEA]
[GO:0051147 "regulation of muscle cell differentiation"
evidence=IEA] [GO:0048641 "regulation of skeletal muscle tissue
development" evidence=IEA] [GO:0043654 "recognition of apoptotic
cell" evidence=IEA] [GO:0034109 "homotypic cell-cell adhesion"
evidence=IEA] [GO:0014841 "satellite cell proliferation"
evidence=IEA] [GO:0014816 "satellite cell differentiation"
evidence=IEA] [GO:0014719 "satellite cell activation" evidence=IEA]
[GO:0001891 "phagocytic cup" evidence=IEA] InterPro:IPR000742
InterPro:IPR011489 Pfam:PF07546 PROSITE:PS50026 PROSITE:PS51041
SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891
GO:GO:0048641 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
GO:GO:0055001 GO:GO:0034109 GO:GO:0014816 Pfam:PF12661
GeneTree:ENSGT00690000101691 GO:GO:0043654 GO:GO:0051147
GO:GO:0014719 GO:GO:0014841 EMBL:AEMK01186990 EMBL:CU582932
EMBL:CU914445 Ensembl:ENSSSCT00000015571 OMA:EDCAKEC
ArrayExpress:F1RKL7 Uniprot:F1RKL7
Length = 305
Score = 133 (51.9 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 51/177 (28%), Positives = 69/177 (38%)
Query: 213 CGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQ-------CNGH 265
C G+ +S E CVP C+ CV G C P+ CQC+ G+ G NCS C C+
Sbjct: 94 CCPGFYESRE--MCVPHCADKCVHGRCIAPNTCQCEPGWGGTNCSSACDGDHWGPHCSSR 151
Query: 266 ADCAGPDKLD-VCLRCHNHT--KGPQCD-KCEP-LYVGDPRDNGECVPCSEYCNGHTGLC 320
C + + CH +G +C+ +CE Y D +C + C+ TG C
Sbjct: 152 CQCKNRALCNPITGACHCAAGFRGWRCEERCEQGTYGNDCHQRCQCQNGAT-CDHVTGEC 210
Query: 321 INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGN-----HTTGPKCEDCVEG 372
P +L GP RC C N H TG +C C G
Sbjct: 211 ------RCPPGYTGAFCEDLCPPGKHGPQCEQRCP-CQNGGVCHHVTG-ECP-CPPG 258
>UNIPROTKB|I3LI73 [details] [associations]
symbol:I3LI73 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR011398 InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 SMART:SM00179 InterPro:IPR000152 GO:GO:0005578
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS01186 PROSITE:PS00010
GO:GO:0005201 InterPro:IPR024731 Pfam:PF12947
GeneTree:ENSGT00700000104076 Gene3D:3.90.290.10 InterPro:IPR017878
PANTHER:PTHR24039:SF0 Pfam:PF00683 SUPFAM:SSF57581 PROSITE:PS51364
EMBL:CU929699 ProteinModelPortal:I3LI73 Ensembl:ENSSSCT00000032576
OMA:ANCTNIN Uniprot:I3LI73
Length = 881
Score = 145 (56.1 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 47/155 (30%), Positives = 68/155 (43%)
Query: 175 FSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQ 232
F+ + C +EC + C+ + QC++ G+ C C G+N +E+ C V C
Sbjct: 717 FTGDGFSCEDRDECAENVDLCE--NGQCLNAPGGYRCECEMGFNPTEDQRACQDVDECVL 774
Query: 233 G--CVRGVCSE-PD--KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLR--CHNHTK 285
G CV G+C P +C CD GY ++ QC +CA P C+ C N
Sbjct: 775 GNLCVFGICENLPGMFRCVCDEGYE-LDRRYP-QCTDVNECADPVN---CINGLCVNTPG 829
Query: 286 GPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLC 320
QC+ C + +P G CV E C GLC
Sbjct: 830 SYQCN-CPQDFELNPSGVG-CVDIDE-CQELPGLC 861
Score = 39 (18.8 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 13/50 (26%), Positives = 20/50 (40%)
Query: 72 LNECISPSYEALYCAGGVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHC 121
++EC+S C GVC + G + A +C + CL C
Sbjct: 173 IDECLSNP-----CVNGVCRNLAGSY-ACECAPGSRLGPSGTVCLDVNEC 216
>UNIPROTKB|F1LWK9 [details] [associations]
symbol:Ntng1 "Protein Ntng1" species:10116 "Rattus
norvegicus" [GO:0007409 "axonogenesis" evidence=IEA] [GO:0046658
"anchored to plasma membrane" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 RGD:1563465 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
IPI:IPI00948119 Ensembl:ENSRNOT00000066218 ArrayExpress:F1LWK9
Uniprot:F1LWK9
Length = 457
Score = 136 (52.9 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 35/111 (31%), Positives = 53/111 (47%)
Query: 259 QCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTG 318
+C+CN HA D + C ++T GP C KC+ Y G P G +P + G
Sbjct: 214 RCKCNLHATMCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPK---GTAN 270
Query: 319 LCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDC 369
CI S++S+ + E G S +++D T C+ C ++T G CE C
Sbjct: 271 TCI-PSISSIG-NCECFGHSNRCSYIDLLNTVI--CVSCKHNTRGQHCELC 317
>UNIPROTKB|F1S575 [details] [associations]
symbol:NTNG2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 OMA:YCECFGH
EMBL:CU179665 EMBL:CU407227 Ensembl:ENSSSCT00000007505
Uniprot:F1S575
Length = 469
Score = 136 (52.9 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 35/111 (31%), Positives = 53/111 (47%)
Query: 259 QCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTG 318
+C+CN HA D + C ++T GP C KC+ Y G P G +P + G
Sbjct: 219 RCKCNLHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPK---GTAN 275
Query: 319 LCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDC 369
CI S++S+ + E G S +++D T C+ C ++T G CE C
Sbjct: 276 TCI-PSISSIG-NCECFGHSNRCSYIDLLNTVI--CVSCKHNTRGQHCELC 322
>MGI|MGI:99892 [details] [associations]
symbol:Lama1 "laminin, alpha 1" species:10090 "Mus musculus"
[GO:0002011 "morphogenesis of an epithelial sheet" evidence=IMP]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0005604 "basement membrane"
evidence=ISO;IDA] [GO:0005605 "basal lamina" evidence=TAS]
[GO:0005606 "laminin-1 complex" evidence=ISO;IDA] [GO:0005608
"laminin-3 complex" evidence=ISO] [GO:0005615 "extracellular space"
evidence=ISO] [GO:0005911 "cell-cell junction" evidence=IDA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007166 "cell surface
receptor signaling pathway" evidence=IDA] [GO:0009888 "tissue
development" evidence=IMP] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=IDA]
[GO:0031175 "neuron projection development" evidence=IDA]
[GO:0043208 "glycosphingolipid binding" evidence=IDA] [GO:0043256
"laminin complex" evidence=IDA] [GO:0045198 "establishment of
epithelial cell apical/basal polarity" evidence=IMP] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0060441
"epithelial tube branching involved in lung morphogenesis"
evidence=IMP] [GO:0060445 "branching involved in salivary gland
morphogenesis" evidence=IMP] [GO:0061304 "retinal blood vessel
morphogenesis" evidence=IMP] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 MGI:MGI:99892 GO:GO:0030155 GO:GO:0007155
GO:GO:0005911 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 Reactome:REACT_127416 GO:GO:0007166
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0031175 GO:GO:0060441
GO:GO:0060445 Pfam:PF02210 GO:GO:0045198 GO:GO:0045995
GO:GO:0005201 GO:GO:0043208 GO:GO:0002011 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0061304 CTD:284217 eggNOG:NOG247347 HOGENOM:HOG000293201
HOVERGEN:HBG052298 KO:K05637 OrthoDB:EOG4K3KVB GO:GO:0005606
EMBL:J04064 EMBL:X07737 EMBL:X13459 EMBL:M36775 IPI:IPI00113726
PIR:A31771 RefSeq:NP_032506.2 UniGene:Mm.303386 PDB:2JD4
PDBsum:2JD4 ProteinModelPortal:P19137 SMR:P19137 MINT:MINT-2635122
STRING:P19137 PhosphoSite:P19137 PaxDb:P19137 PRIDE:P19137
GeneID:16772 KEGG:mmu:16772 UCSC:uc008dkh.1 InParanoid:P19137
EvolutionaryTrace:P19137 NextBio:290602 CleanEx:MM_LAMA1
Genevestigator:P19137 GermOnline:ENSMUSG00000032796 Uniprot:P19137
Length = 3084
Score = 136 (52.9 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 56/186 (30%), Positives = 74/186 (39%)
Query: 202 CVDLADGFEC-VCGRGYNKSEEGGECVPV-CS-QGCVRGVCSEPDKCQCDFGYVGVNCSI 258
C G +C C GY + G CVP CS +G V C+E +C C G G C
Sbjct: 930 CKPHVTGQQCDQCLSGYYGLDTGLGCVPCNCSVEGSVSDNCTEEGQCHCGPGVSGKQCD- 988
Query: 259 QCQCNGHA---------DCAGP-DKLDV----CLRCHNHTKGPQCDKCEPLYVG-DPRDN 303
+C +A DCA + D CL C HT+G +C++CE Y G DP +
Sbjct: 989 RCSHGFYAFQDGGCTPCDCAHTQNNCDPASGECL-CPPHTQGLKCEECEEAYWGLDP-EQ 1046
Query: 304 GECVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTG 363
G C C+ G T + P GG S L G + C+ CG G
Sbjct: 1047 G-CQACNCSAVGSTSAQCDVLSGHCPCKKGFGGQSCHQCSL--GYRSFPDCVPCGCDLRG 1103
Query: 364 PKCEDC 369
+ C
Sbjct: 1104 TLPDTC 1109
Score = 136 (52.9 bits), Expect = 9.2e-06, Sum P(3) = 9.2e-06
Identities = 42/134 (31%), Positives = 59/134 (44%)
Query: 191 DHHTCDPQSEQCVDLADGFECVCGRGYNKSE-EGGECVPVCSQGCVRGVCSEPDKC-QCD 248
D H C P + C D VC + ++ G+ C C +G DKC +C
Sbjct: 397 DDHPCRPCN--C-DPVGSLSSVCIKDDRHADLANGKWPGQCP--CRKGYAG--DKCDRCQ 449
Query: 249 FGYVGV-NCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECV 307
FGY G NC I C C ++ CL C + +G CD+C+P + N E
Sbjct: 450 FGYRGFPNC-IPCDCRTVGSLNEDPCIEPCL-CKKNVEGKNCDRCKPGFYNLKERNPE-- 505
Query: 308 PCSE-YCNGHTGLC 320
CSE +C G +G+C
Sbjct: 506 GCSECFCFGVSGVC 519
Score = 125 (49.1 bits), Expect = 0.00072, P = 0.00072
Identities = 82/315 (26%), Positives = 112/315 (35%)
Query: 36 TGSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLG 95
TG C L+C TD C + G G + + C +L GVC L G
Sbjct: 874 TGE-C-LKCLWNTDGAHCERCADGFYG--DAVTAKNCRACDCHENGSL---SGVCHLETG 926
Query: 96 -----PH-QAPQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTXXXXXXXXXXX 149
PH QC + S Y T L C C+++ + CT
Sbjct: 927 LCDCKPHVTGQQCDQCLSGYYGLDTGLGCVPCN-CSVEGSVSDN---CTEEGQCHCGPGV 982
Query: 150 XXXTCDILFYQTYPDQVIEVNNNDSFSWNYVKCPPEN-ECLNDHHTCDPQSEQC------ 202
CD + Y Q D + C P + ECL HT + E+C
Sbjct: 983 SGKQCDRCSHGFYAFQDGGCTPCDC-AHTQNNCDPASGECLCPPHTQGLKCEECEEAYWG 1041
Query: 203 VDLADGFE-CVCGRGYNKSEE----GGECVPVCSQG--------CVRGVCSEPD--KCQC 247
+D G + C C + S + G C P C +G C G S PD C C
Sbjct: 1042 LDPEQGCQACNCSAVGSTSAQCDVLSGHC-P-CKKGFGGQSCHQCSLGYRSFPDCVPCGC 1099
Query: 248 DF-GYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGE- 305
D G + C ++ G C+ + C C + GPQC KC+ DN +
Sbjct: 1100 DLRGTLPDTCDLE---QGLCSCS--EDSGTC-SCKENVVGPQCSKCQAGTFALRGDNPQG 1153
Query: 306 CVPCSEYCNGHTGLC 320
C PC +C G + LC
Sbjct: 1154 CSPC--FCFGLSQLC 1166
Score = 119 (46.9 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 22/60 (36%), Positives = 29/60 (48%)
Query: 258 IQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRD-NGECVPCSEYCNGH 316
+ C CN H+D P+ CL C +HT G C+ C Y G G+C PC+ C H
Sbjct: 1408 VPCNCNNHSDVCDPET-GKCLSCRDHTSGDHCELCASGYYGKVTGLPGDCTPCT--CPHH 1464
Score = 70 (29.7 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 47/193 (24%), Positives = 73/193 (37%)
Query: 95 GPHQAPQCPRSCSAYTQCSTCLRHAHCGWC------ALQR---DTTG---GMGVCTXXXX 142
G HQ P P + S+ +C C H C A +R +T G G GVC
Sbjct: 314 GYHQQPWRPGTISSGNECEECNCHNKAKDCYYDSSVAKERRSLNTAGQYSGGGVCVNCSQ 373
Query: 143 XXXXXXXXXXTCDILFYQTYPDQVIEVNNNDSFSWNYVKCPPENECLNDHHTCDPQSEQC 202
TC +Y+ + +V+ D C P + C + ++
Sbjct: 374 NTTGINCE--TCIDQYYRPH-----KVSPYDDHPCRPCNCDPVGSLSS---VCI-KDDRH 422
Query: 203 VDLADGF---ECVCGRGY-----NKSEEG--G--ECVPVCSQGCVRGVCSEP--DKCQCD 248
DLA+G +C C +GY ++ + G G C+P C V + +P + C C
Sbjct: 423 ADLANGKWPGQCPCRKGYAGDKCDRCQFGYRGFPNCIP-CDCRTVGSLNEDPCIEPCLCK 481
Query: 249 FGYVGVNCSIQCQ 261
G NC +C+
Sbjct: 482 KNVEGKNCD-RCK 493
Score = 60 (26.2 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 26/95 (27%), Positives = 34/95 (35%)
Query: 39 SCPLRCDQRTDCQDCLTSSGGEGGWHECR--WS-SMLNECISPSYEALYCAGGVC-GLVL 94
+CPL D C + G E +C +S S C Y GG C
Sbjct: 799 ACPLSIDSNNFSPTCHLTDGEEVVCDQCAPGYSGSWCERCADGYYGNPTVPGGTCVPCNC 858
Query: 95 GPHQAPQCPRSCSAYT-QCSTCLRH---AHCGWCA 125
+ P C + T +C CL + AHC CA
Sbjct: 859 SGNVDPLEAGHCDSVTGECLKCLWNTDGAHCERCA 893
Score = 59 (25.8 bits), Expect = 9.2e-06, Sum P(3) = 9.2e-06
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 354 CMHCGNHTTGPKCEDCVEGKENRQSR 379
C C ++TTG CE C+ G SR
Sbjct: 764 CSVCTHNTTGDHCEQCLPGFYGTPSR 789
Score = 43 (20.2 bits), Expect = 9.2e-06, Sum P(3) = 9.2e-06
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 49 DCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVC 90
+C++C + + +++ SS+ E S + Y GGVC
Sbjct: 330 ECEECNCHNKAKDCYYD---SSVAKERRSLNTAGQYSGGGVC 368
Score = 40 (19.1 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 7/16 (43%), Positives = 8/16 (50%)
Query: 357 CGNHTTGPKCEDCVEG 372
C TG CE C+ G
Sbjct: 718 CPQGYTGTSCEACLPG 733
Score = 40 (19.1 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 9/27 (33%), Positives = 11/27 (40%)
Query: 106 CSAYTQCSTCLRHAHCGWCALQRDTTG 132
C + S C H C C +TTG
Sbjct: 749 CECHGHASECDIHGICSVCT--HNTTG 773
>UNIPROTKB|H7BZ76 [details] [associations]
symbol:LTBP1 "Latent-transforming growth factor
beta-binding protein 1" species:9606 "Homo sapiens" [GO:0005509
"calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 SMART:SM00179 InterPro:IPR000152 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS01186 PROSITE:PS00010 EMBL:AC020594
EMBL:AC019195 EMBL:AC019127 HGNC:HGNC:6714 ChiTaRS:LTBP1
EMBL:AL133244 ProteinModelPortal:H7BZ76 Ensembl:ENST00000415140
Uniprot:H7BZ76
Length = 262
Score = 131 (51.2 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 50/155 (32%), Positives = 70/155 (45%)
Query: 186 NECLNDHHTCDPQSEQCVDLADGFECV-CGRGYNKSEEGGECVPV--CSQG--CVRGVCS 240
+ECLN TC P EQCV+ ++CV C G+ G+C+ + C QG CV G C
Sbjct: 3 DECLNPS-TC-PD-EQCVNSPGSYQCVPCTEGFRGWN--GQCLDIDECQQGNLCVNGQCK 57
Query: 241 EPD---KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCL--RCHNHTKGP-QCDKCEP 294
+ +C C GY + + QC +C +C +C N T+G QC C+
Sbjct: 58 NTEGSFRCTCGQGYQ--LSAAKDQCEDIDEC---QHRHLCAHGQCRN-TEGSFQC-VCDQ 110
Query: 295 LY----VGDP-RDNGECVPCSEYCNGHTGLCINAS 324
Y +GD D EC+ C G CIN +
Sbjct: 111 GYRASGLGDHCEDINECLEDKSVCQ--RGDCINTA 143
Score = 124 (48.7 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 46/153 (30%), Positives = 60/153 (39%)
Query: 177 WNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG- 233
WN +C +EC + C + QC + F C CG+GY S +C + C
Sbjct: 35 WNG-QCLDIDEC-QQGNLC--VNGQCKNTEGSFRCTCGQGYQLSAAKDQCEDIDECQHRH 90
Query: 234 -CVRGVCSEPD---KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLR--CHNHTKGP 287
C G C + +C CD GY C+ +C DK VC R C N
Sbjct: 91 LCAHGQCRNTEGSFQCVCDQGYRASGLGDHCEDIN--ECL-EDK-SVCQRGDCINTAGSY 146
Query: 288 QCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLC 320
C C + D DN C +E C H GLC
Sbjct: 147 DCT-CPDGFQLD--DNKTCQDINE-CE-HPGLC 174
>FB|FBgn0027929 [details] [associations]
symbol:nimB1 "nimrod B1" species:7227 "Drosophila
melanogaster" [GO:0051635 "bacterial cell surface binding"
evidence=ISS] [GO:0042742 "defense response to bacterium"
evidence=ISS] [GO:0005576 "extracellular region" evidence=ISM]
InterPro:IPR000742 SMART:SM00181 GO:GO:0005576 EMBL:AE014134
GO:GO:0042742 GO:GO:0051635 GeneTree:ENSGT00660000095436
HSSP:P01175 EMBL:AF160879 RefSeq:NP_788045.1 UniGene:Dm.19213
SMR:Q9VJU9 STRING:Q9VJU9 EnsemblMetazoa:FBtr0080585 GeneID:34813
KEGG:dme:Dmel_CG33119 UCSC:CG33119-RA CTD:34813 FlyBase:FBgn0027929
eggNOG:NOG288690 InParanoid:Q9VJU9 OMA:GACIHTC OrthoDB:EOG48KPSR
GenomeRNAi:34813 NextBio:790345 Uniprot:Q9VJU9
Length = 402
Score = 133 (51.9 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 37/124 (29%), Positives = 58/124 (46%)
Query: 200 EQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVG-VNCSI 258
E+CV A G +C C GY ++ + G C PVC+ C G C P++C+C G++ N ++
Sbjct: 188 EECV--APG-QCDCSPGYRRTPDLG-CQPVCAPDCGFGKCVAPNQCECFAGFIKRPNWNV 243
Query: 259 QCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVP-CSEYCNGHT 317
C+ + +C + +CH C Y D C+P CS+ C
Sbjct: 244 -CEAECYLNCEN-GLCESRYKCH----------CREGYRYDVNTTS-CLPECSDNCGQGN 290
Query: 318 GLCI 321
G+CI
Sbjct: 291 GVCI 294
Score = 42 (19.8 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 5/13 (38%), Positives = 9/13 (69%)
Query: 100 PQCPRSCSAYTQC 112
P+C +SC + +C
Sbjct: 178 PKCSQSCGTHEEC 190
>UNIPROTKB|F1N968 [details] [associations]
symbol:F1N968 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0031012
"extracellular matrix" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005615 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 GO:GO:0031012 PROSITE:PS00010
GeneTree:ENSGT00700000104076 Gene3D:3.90.290.10 InterPro:IPR017878
Pfam:PF00683 SUPFAM:SSF57581 PROSITE:PS51364 OMA:GRDECWC
EMBL:AADN02003450 EMBL:AADN02003451 EMBL:AADN02003452
EMBL:AADN02003453 IPI:IPI00577169 Ensembl:ENSGALT00000016690
Uniprot:F1N968
Length = 1650
Score = 135 (52.6 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 44/164 (26%), Positives = 67/164 (40%)
Query: 178 NYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG-- 233
N C NECLN C P E C++ + C+C G++ S+ G C V C+
Sbjct: 996 NGTVCQDVNECLNSE-ICSPNGE-CLNSHGSYFCICAPGFSSSDGGVNCQDVDECTDKSR 1053
Query: 234 CVRGVCSEPD---KCQCDFGYVGVNCSIQC----QCNGHADCAGPDKLDVC--LRCHNHT 284
C +G C + +C C+ G+ + C +C + D +C RC N
Sbjct: 1054 CSQGQCLNTEGSYRCLCENGFKHSQETDDCIDVDECKEYGDA-------ICGTWRCQNSL 1106
Query: 285 KGPQCDK-CEPLYVGDPRDNGECVPCSEYCN----GHTGLCINA 323
+C C+P + P G+C+ E N G G C N+
Sbjct: 1107 GSYRCIMGCQPGFHWTPP--GDCIDIDECANETLCGSHGFCENS 1148
Score = 55 (24.4 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 27/96 (28%), Positives = 35/96 (36%)
Query: 38 SSCP-LRCDQRTDCQDCLTSSGGEGGWH-ECRWSSMLNECISPSYEALYCAGGVCGLVLG 95
S+CP RC C G G +C +NEC+ PS C G C G
Sbjct: 762 STCPGQRCVNTPGSYRCECKEGFAMGLRGQCE---DINECVDPSP----CPHGKCVNTPG 814
Query: 96 PHQAPQC-----PRS--CSAYTQC---STCLRHAHC 121
++ C PR+ C +C TC H C
Sbjct: 815 SYRCVGCADGYQPRNGRCIDVDECLVERTCA-HGQC 849
Score = 42 (19.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 82 ALYCAGGVCGLVLGPHQ 98
A+ C GG C LG ++
Sbjct: 969 AIQCLGGACRNTLGSYE 985
Score = 38 (18.4 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 15/54 (27%), Positives = 16/54 (29%)
Query: 37 GSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEAL--YCAGG 88
G C R Q C S G+G W EC P A C G
Sbjct: 501 GGVCSFPLSHRITQQICCCSRVGKG------WGKNCEECPVPGSGAFKEICPAG 548
>UNIPROTKB|F5H1T4 [details] [associations]
symbol:ERBB2 "Receptor tyrosine-protein kinase erbB-2"
species:9606 "Homo sapiens" [GO:0004714 "transmembrane receptor
protein tyrosine kinase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0007169 "transmembrane receptor protein
tyrosine kinase signaling pathway" evidence=IEA] [GO:0001934
"positive regulation of protein phosphorylation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007422 "peripheral
nervous system development" evidence=IEA] [GO:0007507 "heart
development" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0016324 "apical plasma membrane" evidence=IEA]
[GO:0032321 "positive regulation of Rho GTPase activity"
evidence=IEA] [GO:0033088 "negative regulation of immature T cell
proliferation in thymus" evidence=IEA] [GO:0042552 "myelination"
evidence=IEA] InterPro:IPR000494 InterPro:IPR006211 Pfam:PF00757
Pfam:PF01030 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0043066 GO:GO:0007507 GO:GO:0042493 GO:GO:0016324
GO:GO:0008284 GO:GO:0045211 GO:GO:0007528 GO:GO:0004714
GO:GO:0007422 GO:GO:0048678 GO:GO:0014068 GO:GO:0001889
GO:GO:0046777 GO:GO:0045121 GO:GO:0007169 GO:GO:0008045
GO:GO:0042552 GO:GO:0043410 GO:GO:0032570 GO:GO:0032321
GO:GO:0001934 GO:GO:0005902 GO:GO:0009925 GO:GO:0048485
GO:GO:0060056 GO:GO:0046579 GO:GO:0010001 InterPro:IPR006212
InterPro:IPR009030 SMART:SM00261 SUPFAM:SSF57184 GO:GO:0033088
GO:GO:0043219 HGNC:HGNC:3430 ChiTaRS:ERBB2 GO:GO:0060209
GO:GO:0043586 EMBL:AC079199 EMBL:AC087491 IPI:IPI01009701
SMR:F5H1T4 Ensembl:ENST00000540042 Ensembl:ENST00000578199
UCSC:uc002hsl.3 Uniprot:F5H1T4
Length = 603
Score = 106 (42.4 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 43/143 (30%), Positives = 60/143 (41%)
Query: 193 HTCDPQSEQCVDLADGFEC--VCGRGYNKSEEGGECVPVCSQGCVRGV-CSEPDKCQCDF 249
HT + ++CV +G C +C RG+ +CV CSQ +RG C E +C+
Sbjct: 465 HTANRPEDECV--GEGLACHQLCARGHCWGPGPTQCVN-CSQ-FLRGQECVE--ECRVLQ 518
Query: 250 G----YVGVN----CSIQCQC-NGHADCAGPDKLDVCLRCHNHTKGPQC-DKCEPLYVGD 299
G YV C +CQ NG C GP+ D C+ C ++ P C +C D
Sbjct: 519 GLPREYVNARHCLPCHPECQPQNGSVTCFGPEA-DQCVACAHYKDPPFCVARCPSGVKPD 577
Query: 300 ---------PRDNGECVPCSEYC 313
P + G C PC C
Sbjct: 578 LSYMPIWKFPDEEGACQPCPINC 600
Score = 89 (36.4 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 33/106 (31%), Positives = 44/106 (41%)
Query: 253 GVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQC-DKCEPLYVGDPRD--NGE-CVP 308
G+ C C GH C GP C+ C +G +C ++C L G PR+ N C+P
Sbjct: 478 GLACHQLC-ARGH--CWGPGPTQ-CVNCSQFLRGQECVEECRVLQ-GLPREYVNARHCLP 532
Query: 309 CSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARC 354
C C G S+ F PE+ A + D P ARC
Sbjct: 533 CHPECQPQNG-----SVTC--FGPEADQCVACAHYKDP-PFCVARC 570
Score = 76 (31.8 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 26/83 (31%), Positives = 30/83 (36%)
Query: 50 CQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQAPQCPRSCSA- 108
C C G W E SS +C S CAGG C GP C C+A
Sbjct: 162 CHPCSPMCKGSRCWGE---SS--EDC--QSLTRTVCAGG-CARCKGPLPTDCCHEQCAAG 213
Query: 109 -----YTQCSTCLRHAHCGWCAL 126
++ C CL H G C L
Sbjct: 214 CTGPKHSDCLACLHFNHSGICEL 236
>UNIPROTKB|E9PHW4 [details] [associations]
symbol:FBN2 "Fibrillin-2" species:9606 "Homo sapiens"
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR011398
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005578
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
PROSITE:PS00010 GO:GO:0005201 Gene3D:3.90.290.10 InterPro:IPR017878
PANTHER:PTHR24039:SF0 Pfam:PF00683 SUPFAM:SSF57581 PROSITE:PS51364
EMBL:AC025169 EMBL:AC034235 EMBL:AC113387 HGNC:HGNC:3604
EMBL:AC114276 IPI:IPI00966506 ProteinModelPortal:E9PHW4 SMR:E9PHW4
Ensembl:ENST00000502468 UCSC:uc003kuw.4 ArrayExpress:E9PHW4
Bgee:E9PHW4 Uniprot:E9PHW4
Length = 341
Score = 133 (51.9 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 35/110 (31%), Positives = 48/110 (43%)
Query: 197 PQSEQCV------DLADGF-----ECVCGRGYNKSEEGGECVPVCSQGCVRG-VCSEPDK 244
P QC+ DGF C C G S G + + CS C+ G C++ D
Sbjct: 105 PGGNQCIVPICRNSCGDGFCSRPNMCTCSSGQISSTCGSKSIQQCSVRCMNGGTCAD-DH 163
Query: 245 CQCDFGYVGVNCSIQ-CQ--CNGHADCAGPDKLDVCLRCHNHTKGPQCDK 291
CQC GY+G C C+ C C GP++ C + T GPQC++
Sbjct: 164 CQCQKGYIGTYCGQPVCENGCQNGGRCIGPNR---CACVYGFT-GPQCER 209
>FB|FBgn0261563 [details] [associations]
symbol:wb "wing blister" species:7227 "Drosophila
melanogaster" [GO:0005605 "basal lamina" evidence=ISS;NAS;IDA]
[GO:0005604 "basement membrane" evidence=ISS] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0005102 "receptor
binding" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0007502 "digestive tract mesoderm development" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0008406
EMBL:AE014134 GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0005605
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0007476 Pfam:PF02210 HSSP:P00740 GO:GO:0045995
GeneTree:ENSGT00700000104140 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 GO:GO:0007502 GO:GO:0005606 FlyBase:FBgn0261563
ChiTaRS:wb RefSeq:NP_723870.1 ProteinModelPortal:Q8IP51 SMR:Q8IP51
STRING:Q8IP51 PRIDE:Q8IP51 EnsemblMetazoa:FBtr0302731 GeneID:43946
KEGG:dme:Dmel_CG42677 UCSC:CG15288-RB CTD:43946 InParanoid:Q8IP51
OMA:CNCNAYG GenomeRNAi:43946 NextBio:836431 ArrayExpress:Q8IP51
Bgee:Q8IP51 Uniprot:Q8IP51
Length = 3375
Score = 141 (54.7 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 56/193 (29%), Positives = 75/193 (38%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCSE 241
CP + N +C +S +DL FE + E E + C+Q C G
Sbjct: 904 CPLSEDSNNFSPSCQLKSYNYMDLNPQFELI---------EHAEYI--CTQ-CPEGYTG- 950
Query: 242 PDKCQ-CDFGYVGVNCSIQCQCNGHADCAG-PDKLDV--CLRCHNHTKGPQCDKCEPLYV 297
D CQ CD GY G C DCAG P + C+ C +T+G C++C+ Y
Sbjct: 951 -DHCQVCDDGYFGNPRQPGSSCQ-RCDCAGGPCNVTTGECITCRGNTEGWHCERCKLGYW 1008
Query: 298 GDPRDNGECVPCSEYCNG-HTGLCINASLASLPFSPESGGTSELAAFLDEG-PTTRARCM 355
GDP C PC + G +GLC + L P G + D G RC
Sbjct: 1009 GDPAVG--CDPCHCHTEGSESGLCDSTDGQCL-CKPRYAG--QKCDECDVGYANVELRCP 1063
Query: 356 HCGNHTTGPKCED 368
C G +D
Sbjct: 1064 SCNCDPLGSLVQD 1076
Score = 125 (49.1 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 37/149 (24%), Positives = 59/149 (39%)
Query: 200 EQCVDLADGFEC-VCGRGYNKSEEG---GECVPV-CSQGCVRGVC-SEPDKCQCDFGYVG 253
+ C + G EC C G+ + + C+P C+ G C S+ C C G+ G
Sbjct: 473 QSCSNNTAGIECEFCEMGFYRELDAPLTDPCLPCSCNPARSTGGCQSDGGSCNCLEGFQG 532
Query: 254 VNCSI-----------QCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRD 302
NC +C+C+ +C + +G C +C P Y +
Sbjct: 533 KNCEECAPGYYGDDCKRCECDERGSLGSTGSCSGVCQCKLNVEGSTCSECAPGYFDLSAE 592
Query: 303 NGE-CVPCSEYCNGHTGLCINASLASLPF 330
N E C C +C+G + C +A L +L F
Sbjct: 593 NAEGCTSC--WCSGVSQTCHSAKLQTLAF 619
Score = 123 (48.4 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 48/193 (24%), Positives = 69/193 (35%)
Query: 184 PENECLNDHHTCDPQSEQCVDLAD------GFECVCGRGYNKSEEGGECV--PVCSQGCV 235
P +C+ H+TC Q EQC L G EC + Y +E C P +G
Sbjct: 416 PLMQCICQHNTCGAQCEQCCPLFQDRPYQMGGECEICQCYGHAES---CTYDPFLDKGIC 472
Query: 236 RGVCSEPDKCQCDFGYVG---------VNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKG 286
+ + +C+F +G + + C CN G C +G
Sbjct: 473 QSCSNNTAGIECEFCEMGFYRELDAPLTDPCLPCSCNPARSTGGCQSDGGSCNCLEGFQG 532
Query: 287 PQCDKCEPLYVGDPRDNGECVPCSEYCN-GHTGLCINASLASLPFSPESGGTSELA-AFL 344
C++C P Y GD D C C E + G TG C + + + E SE A +
Sbjct: 533 KNCEECAPGYYGD--DCKRC-ECDERGSLGSTGSC--SGVCQCKLNVEGSTCSECAPGYF 587
Query: 345 DEGPTTRARCMHC 357
D C C
Sbjct: 588 DLSAENAEGCTSC 600
Score = 122 (48.0 bits), Expect = 0.00061, Sum P(3) = 0.00061
Identities = 54/205 (26%), Positives = 79/205 (38%)
Query: 176 SWNYVKCPPENECLND-HHTCDPQSEQCVDLADGFEC-VCGRGY--NKSEEGGECVPVCS 231
S+NY+ P+ E + + C QC + G C VC GY N + G C C
Sbjct: 921 SYNYMDLNPQFELIEHAEYICT----QCPEGYTGDHCQVCDDGYFGNPRQPGSSCQR-CD 975
Query: 232 QGCVRGVCS-EPDKC-QCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQC 289
C G C+ +C C G +C +C+ D A C CH HT+G +
Sbjct: 976 --CAGGPCNVTTGECITCRGNTEGWHCE-RCKLGYWGDPAVG-----CDPCHCHTEGSES 1027
Query: 290 DKCEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDE--G 347
C D D G+C+ Y C + A++ S L + + +
Sbjct: 1028 GLC------DSTD-GQCLCKPRYAGQKCDEC-DVGYANVELRCPSCNCDPLGSLVQDRCD 1079
Query: 348 PTTRARCMHCGNHTTGPKCEDCVEG 372
P T +C HC G KC +C +G
Sbjct: 1080 PHT-GQC-HCKEGVMGAKCHECQDG 1102
Score = 54 (24.1 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 354 CMHCGNHTTGPKCEDCVEG 372
C +C +T G C C EG
Sbjct: 1686 CQNCRGNTGGDHCHQCAEG 1704
Score = 46 (21.3 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 22/90 (24%), Positives = 27/90 (30%)
Query: 36 TGSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLG 95
T P C+ C S GG E EC +P Y C C
Sbjct: 500 TDPCLPCSCNPARSTGGC-QSDGGSCNCLEGFQGKNCEEC-APGYYGDDCKRCECD---- 553
Query: 96 PHQAPQCPRSCSAYTQCSTCLRHAHCGWCA 125
+ SCS QC + + C CA
Sbjct: 554 ERGSLGSTGSCSGVCQCKLNVEGSTCSECA 583
Score = 44 (20.5 bits), Expect = 5.3e-05, Sum P(3) = 5.3e-05
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 353 RCMHCGNHTTGPKCEDC 369
RC +C TG KC+ C
Sbjct: 1791 RC-YCREGVTGLKCDKC 1806
>UNIPROTKB|Q96KG7 [details] [associations]
symbol:MEGF10 "Multiple epidermal growth factor-like
domains protein 10" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043654 "recognition of apoptotic cell"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
[GO:0016323 "basolateral plasma membrane" evidence=IEA] [GO:0048641
"regulation of skeletal muscle tissue development" evidence=IMP]
[GO:0014719 "satellite cell activation" evidence=ISS] [GO:0014841
"satellite cell proliferation" evidence=ISS] [GO:0034109 "homotypic
cell-cell adhesion" evidence=IDA] [GO:0051147 "regulation of muscle
cell differentiation" evidence=IMP] [GO:0014816 "satellite cell
differentiation" evidence=IMP] [GO:0055001 "muscle cell
development" evidence=IMP] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 GO:GO:0016021
EMBL:CH471062 GO:GO:0016323 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0042995 GO:GO:0001891 GO:GO:0048641 PROSITE:PS01186
eggNOG:NOG12793 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
GO:GO:0055001 GO:GO:0034109 GO:GO:0014816 HOGENOM:HOG000294130
Pfam:PF12661 GO:GO:0043654 HSSP:P01132 GO:GO:0051147 EMBL:AB058676
EMBL:CR749437 EMBL:BC020198 EMBL:BC152478 IPI:IPI00064607
IPI:IPI00873983 RefSeq:NP_001243474.1 RefSeq:NP_115822.1
UniGene:Hs.438709 ProteinModelPortal:Q96KG7 SMR:Q96KG7
IntAct:Q96KG7 STRING:Q96KG7 PhosphoSite:Q96KG7 DMDM:74716908
PaxDb:Q96KG7 PRIDE:Q96KG7 Ensembl:ENST00000274473
Ensembl:ENST00000418761 Ensembl:ENST00000503335
Ensembl:ENST00000508365 GeneID:84466 KEGG:hsa:84466 UCSC:uc003kuh.4
UCSC:uc010jdc.1 CTD:84466 GeneCards:GC05P126654 HGNC:HGNC:29634
HPA:HPA026876 MIM:612453 MIM:614399 neXtProt:NX_Q96KG7
Orphanet:98920 PharmGKB:PA144596410 HOVERGEN:HBG108333
InParanoid:Q96KG7 OMA:FGCNLTC PhylomeDB:Q96KG7 GenomeRNAi:84466
NextBio:74274 Bgee:Q96KG7 CleanEx:HS_MEGF10 Genevestigator:Q96KG7
GO:GO:0014719 GO:GO:0014841 Uniprot:Q96KG7
Length = 1140
Score = 140 (54.3 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 63/233 (27%), Positives = 86/233 (36%)
Query: 160 QTYP---DQVIEVNNNDSFSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRG 216
++YP DQ+ + D +W KC + T E+ + +C C
Sbjct: 46 ESYPHPFDQIYYTSCTDILNW--FKCTRHRV---SYRTAYRHGEKTMYRRKS-QC-CPGF 98
Query: 217 YNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQ-------CNGHADCA 269
Y E G CVP C+ CV G C P+ CQC+ G+ G NCS C C C
Sbjct: 99 Y---ESGEMCVPHCADKCVHGRCIAPNTCQCEPGWGGTNCSSACDGDHWGPHCTSRCQCK 155
Query: 270 GPDKLD-VCLRCHNHT--KGPQC-DKCEP-LYVGDPRDNGECVPCSEYCNGHTGLCINAS 324
+ + CH +G +C D+CE Y D +C + C+ TG C
Sbjct: 156 NGALCNPITGACHCAAGFRGWRCEDRCEQGTYGNDCHQRCQCQNGAT-CDHVTGEC---- 210
Query: 325 LASLPFSPESGGTSELAAFLDEGPTTRARCMHCGN-----HTTGPKCEDCVEG 372
P +L GP RC C N H TG +C C G
Sbjct: 211 --RCPPGYTGAFCEDLCPPGKHGPQCEQRCP-CQNGGVCHHVTG-ECS-CPSG 258
Score = 134 (52.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 73/296 (24%), Positives = 104/296 (35%)
Query: 42 LRCDQRTDCQ-DCLTSSGGEGGWHECR--WSSML-NECISPSYEALYCAGGVCGLVLGPH 97
++CD+R C + S G C+ WS + NE SP + Y G C +
Sbjct: 362 IKCDKRCPCHLENTHSCHPMSGECACKPGWSGLYCNETCSPGF---Y--GEACQQICSCQ 416
Query: 98 QAPQCPRSCSAYTQCSTCLRHAHCGW-CALQRDTTGGMGVCTXXXXXXXXXXXXXXTCDI 156
C S + C+ + C C L C TC
Sbjct: 417 NGADCD-SVTGKCTCAPGFKGIDCSTPCPLGTYGINCSSRCGCKNDAVCSPVDGSCTCKA 475
Query: 157 LFYQTYPDQVIEVNNND-SFSWNYV-KCPPENEC--LNDHHTCDP--QSEQC-VDLADG- 208
++ D I + F N +C C L+ TC P + E+C + DG
Sbjct: 476 GWHGV--DCSIRCPSGTWGFGCNLTCQCLNGGACNTLDGTCTCAPGWRGEKCELPCQDGT 533
Query: 209 FECVCGRGYNKSEEGGECVPVCSQ-GCVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHAD 267
+ C + S G C P C+ G C G G NCS+ C C A
Sbjct: 534 YGLNCAERCDCSHADG-CHPTTGHCRCLPGWSGVHCDSVCAEGRWGPNCSLPCYCKNGAS 592
Query: 268 CAGPDKLDVCLRCHNHTKGPQCDK-CEPLYVGD--PRDNGECVPCSEYCNGHTGLC 320
C+ PD +C C +G C + C P + G + +CV S C+ TGLC
Sbjct: 593 CS-PDD-GIC-ECAPGFRGTTCQRICSPGFYGHRCSQTCPQCVHSSGPCHHITGLC 645
Score = 115 (45.5 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 63/231 (27%), Positives = 88/231 (38%)
Query: 180 VKCPPENEC-LNDHHTCDPQSEQCVDLA--DGFEC--VCGRG-YNKS-------EEGGEC 226
+KC C L + H+C P S +C G C C G Y ++ + G +C
Sbjct: 362 IKCDKRCPCHLENTHSCHPMSGECACKPGWSGLYCNETCSPGFYGEACQQICSCQNGADC 421
Query: 227 VPV-----CSQGCVRGV-CSEPDKCQCDFGYVGVNCSIQCQCNGHADC----------AG 270
V C+ G +G+ CS P C G G+NCS +C C A C AG
Sbjct: 422 DSVTGKCTCAPG-FKGIDCSTP----CPLGTYGINCSSRCGCKNDAVCSPVDGSCTCKAG 476
Query: 271 PDKLDVCLRCHNHTKGPQCD-KCEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLP 329
+D +RC + T G C+ C+ L + G C C G LP
Sbjct: 477 WHGVDCSIRCPSGTWGFGCNLTCQCL------NGGACNTLDGTCTCAPGW--RGEKCELP 528
Query: 330 FSPESGGTSELAAFLD----EG--PTTRARCMHCGNHTTGPKCED-CVEGK 373
+ G + A D +G PTT C C +G C+ C EG+
Sbjct: 529 CQDGTYGLN-CAERCDCSHADGCHPTT-GHC-RCLPGWSGVHCDSVCAEGR 576
Score = 114 (45.2 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 60/205 (29%), Positives = 73/205 (35%)
Query: 181 KCPPENECLNDHHTCDP--QSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGV 238
+CPP C P QC C C G GEC C G + V
Sbjct: 211 RCPPGYTGAFCEDLCPPGKHGPQCEQ-----RCPCQNGGVCHHVTGECS--CPSGWMGTV 263
Query: 239 CSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVG 298
C +P C G G NCS +CQC+ C +CH C P Y G
Sbjct: 264 CGQP----CPEGRFGKNCSQECQCHNGGTCDAATG-----QCH----------CSPGYTG 304
Query: 299 DPRDNGEC------VPCSEYC---NGHTGLCINASLASLPFSPESGGTSELAAFLDEGP- 348
+ R EC V C+E C NG G C + S A L + +G E A EG
Sbjct: 305 E-RCQDECPVGTYGVLCAETCQCVNG--GKCYHVSGACLCEAGFAGERCE-ARLCPEGLY 360
Query: 349 --TTRARC-MHCGN-HTTGPKCEDC 369
RC H N H+ P +C
Sbjct: 361 GIKCDKRCPCHLENTHSCHPMSGEC 385
Score = 52 (23.4 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 18/69 (26%), Positives = 22/69 (31%)
Query: 73 NEC-ISPSYEALYCAGGVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHC-----GWCAL 126
N C P + C+ G GPH +C C C+ HC GW
Sbjct: 122 NTCQCEPGWGGTNCSSACDGDHWGPHCTSRC--QCKNGALCNPITGACHCAAGFRGWRCE 179
Query: 127 QRDTTGGMG 135
R G G
Sbjct: 180 DRCEQGTYG 188
>UNIPROTKB|H7C557 [details] [associations]
symbol:MEGF6 "Multiple epidermal growth factor-like domains
protein 6" species:9606 "Homo sapiens" [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
EMBL:AL512413 Pfam:PF12661 EMBL:AL513320 HGNC:HGNC:3232
ProteinModelPortal:H7C557 Ensembl:ENST00000485002 Uniprot:H7C557
Length = 1156
Score = 126 (49.4 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 55/220 (25%), Positives = 72/220 (32%)
Query: 177 WNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECV-CGRGYNKSEEGGECVPVCSQGCV 235
W C C ND H C P + C A G+ C R + G +C C+
Sbjct: 661 WYGPSCQTRCSCANDGH-CHPATGHC-SCAPGWTGFSCQRACDTGHWGPDCSHPCNCSAG 718
Query: 236 RGVCSE-PDKCQCDFGYVGVNCSIQCQ-------CNGHADC---AGPDKLDVCLRCHNHT 284
G C C C+ GYVG C QC C C A D + C
Sbjct: 719 HGSCDAISGLCLCEAGYVGPRCEQQCPQGHFGPGCEQRCQCQHGAACDHVSGACTCPAGW 778
Query: 285 KGPQCDK-CEPLYVG-DPRDNGECVPCSEYCNGHTGLCINASLASLPFSPES------GG 336
+G C+ C + G D R C C+ G C+ + P E+ G
Sbjct: 779 RGTFCEHACPAGFFGLDCRSACNCT-AGAACDAVNGSCLCPAGRRGPRCAETCPAHTYGH 837
Query: 337 TSELAAFLDEGPT---TRARCMHCGNHTTGPKC-EDCVEG 372
A G + +C HC GP C + C G
Sbjct: 838 NCSQACACFNGASCDPVHGQC-HCAPGWMGPSCLQACPAG 876
Score = 61 (26.5 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 27/86 (31%), Positives = 35/86 (40%)
Query: 37 GSSCPLRCDQRTDCQDCLTSSGGEGGWHECR--WSSML-NECISPSYEALYCA------- 86
G C L CD DC++ T G G +C W+ ++ NE P C+
Sbjct: 357 GHDCSLTCD---DCRNGGTCLLGLDGC-DCPEGWTGLICNETCPPDTFGKNCSFSCSCQN 412
Query: 87 GGVCGLVLGPHQAPQCPRSCSAYTQC 112
GG C V G A +CP S T C
Sbjct: 413 GGTCDSVTG---ACRCPPGVSG-TNC 434
Score = 56 (24.8 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 29/106 (27%), Positives = 36/106 (33%)
Query: 35 KTGSSCPLRCDQRTD-CQ-DCLTSSGGEGGWHECRWSSMLNECISPSYEA-LYCAGGVCG 91
K SC + R + CQ +C G G W C + C S S E C G G
Sbjct: 506 KRDGSCSCKAGFRGERCQAECELGYFGPGCWQACTCPVGV-ACDSVSGECGKRCPAGFQG 564
Query: 92 LVLGPHQAPQCPR-----SCSAYTQCSTCLRHAHCGWCALQRDTTG 132
G +CP +CS+ C H G C TG
Sbjct: 565 EDCGQ----ECPVGTFGVNCSSSCSCGGAPCHGVTGQCRCPPGRTG 606
Score = 53 (23.7 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 21/84 (25%), Positives = 23/84 (27%)
Query: 44 CDQRTDCQDCLTSSGGEGGWHECRWS----SMLNECISPSYEALYCAGGVCGLVL-GPHQ 98
CD+R C GE EC C P A G CG Q
Sbjct: 504 CDKRDGSCSCKAGFRGERCQAECELGYFGPGCWQACTCPVGVACDSVSGECGKRCPAGFQ 563
Query: 99 APQCPRSCSAYTQCSTCLRHAHCG 122
C + C T C CG
Sbjct: 564 GEDCGQECPVGTFGVNCSSSCSCG 587
>UNIPROTKB|F1NCH8 [details] [associations]
symbol:F1NCH8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000904 "cell morphogenesis involved in
differentiation" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0014002 "astrocyte development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA]
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 GeneTree:ENSGT00690000102103 OMA:QRGRRCE
EMBL:AADN02026542 EMBL:AADN02026543 IPI:IPI00589777
Ensembl:ENSGALT00000006123 Uniprot:F1NCH8
Length = 1444
Score = 141 (54.7 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 39/120 (32%), Positives = 55/120 (45%)
Query: 259 QCQCNGHA-DCAGPDKLD--VCLRCHNHTKGPQCDKCEPLYVGDPRDNG------ECVPC 309
+C+CNGHA +CA PD+ VC+ C ++T G C C+P Y P G EC+PC
Sbjct: 270 RCKCNGHASECA-PDEAGRLVCV-CEHNTAGTDCQHCQPFYQDRPWARGTAEAANECLPC 327
Query: 310 SEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDC 369
C+G + C +EL G C +C ++T GP+CE C
Sbjct: 328 D--CSGRSEECFY--------------DAELFRRTGRG----GHCRNCRDNTAGPRCEQC 367
Score = 133 (51.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 54/182 (29%), Positives = 70/182 (38%)
Query: 211 CVC-GRG-YNKSEEGGECVPVCSQGCVRGVCSEPDKCQ-CDFGYVG--------VNCSIQ 259
C C GR + GE V C+ C G +C+ CD G+ G V +
Sbjct: 759 CPCPGRSPCTQLPSSGEVV--CTH-CPPG--QRGKRCELCDDGFFGDPLGQRGPVRPCVP 813
Query: 260 CQCNGHADCAGPDKLDV----CLRCHNHTKGPQCDKCEPLYVGD---PRDNGECVPCSEY 312
CQC+G+ D D CLRC ++T G QC +C P + GD P G+C C+
Sbjct: 814 CQCHGNVDLNAVGNCDSVSGRCLRCLHNTTGEQCQQCRPGFYGDALAPSPAGKCASCN-- 871
Query: 313 CN--GHT-GL--CINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCE 367
CN G GL C + L G T L G C C H G +
Sbjct: 872 CNPDGSALGLEGCDPGTGQCLCLPHVLGRTCGLCQHGYYGLQAAVGCKSCECHPVGSQDS 931
Query: 368 DC 369
C
Sbjct: 932 GC 933
Score = 130 (50.8 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 32/96 (33%), Positives = 44/96 (45%)
Query: 225 ECV-PVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNH 283
EC P G C+ K FG V C + C CN H DC + L RC ++
Sbjct: 676 ECTCPPSYTGSFCESCAPGFKRDIPFGGPFVTC-VPCTCNQHGDC---EPLSGHCRCLHN 731
Query: 284 TKGPQCDKCEPLYVGDPRDN--GECVPCSEYCNGHT 317
T+GP C++C P + G+P +C PC C G +
Sbjct: 732 TEGPSCERCSPGFYGNPFTGHPDDCKPCP--CPGRS 765
Score = 41 (19.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 22/76 (28%), Positives = 29/76 (38%)
Query: 39 SC-PLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPH 97
+C P C+Q DC+ SG H CR L+ PS E C+ G G H
Sbjct: 707 TCVPCTCNQHGDCEPL---SG-----H-CR---CLHNTEGPSCER--CSPGFYGNPFTGH 752
Query: 98 QAPQCPRSCSAYTQCS 113
P C + C+
Sbjct: 753 PDDCKPCPCPGRSPCT 768
>MGI|MGI:101922 [details] [associations]
symbol:Tnc "tenascin C" species:10090 "Mus musculus"
[GO:0001968 "fibronectin binding" evidence=ISO] [GO:0005576
"extracellular region" evidence=IDA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0005614 "interstitial matrix" evidence=IDA]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0008284 "positive regulation of cell
proliferation" evidence=IDA] [GO:0010628 "positive regulation of
gene expression" evidence=IDA] [GO:0014012 "peripheral nervous
system axon regeneration" evidence=IMP] [GO:0045545 "syndecan
binding" evidence=ISO] [GO:0060739 "mesenchymal-epithelial cell
signaling involved in prostate gland development" evidence=IMP]
[GO:0060740 "prostate gland epithelium morphogenesis" evidence=IMP]
InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50026
PROSITE:PS50853 SMART:SM00060 SMART:SM00181 MGI:MGI:101922
INTERPRO:IPR002181 GO:GO:0007165 GO:GO:0005615 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0008284 GO:GO:0007528 SUPFAM:SSF49265
GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
GO:GO:0010628 eggNOG:NOG12793 GO:GO:0005604 GO:GO:0060740
Gene3D:3.90.215.10 Gene3D:4.10.530.10 InterPro:IPR014716
InterPro:IPR014715 Pfam:PF00147 SMART:SM00186 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 GO:GO:0014012 GO:GO:0005614
InterPro:IPR013111 Pfam:PF07974 Pfam:PF12661 GO:GO:0045545
HOVERGEN:HBG008949 OrthoDB:EOG4MSCX9 CTD:3371 KO:K06252 OMA:GQRSCPN
GO:GO:0060739 EMBL:D90343 EMBL:X56304 EMBL:AL732556 IPI:IPI00403938
IPI:IPI00420656 IPI:IPI00785310 IPI:IPI00785346 IPI:IPI00785360
PIR:JQ1322 RefSeq:NP_035737.2 UniGene:Mm.454219 UniGene:Mm.980
HSSP:P24821 ProteinModelPortal:Q80YX1 SMR:Q80YX1 STRING:Q80YX1
PhosphoSite:Q80YX1 PaxDb:Q80YX1 PRIDE:Q80YX1
Ensembl:ENSMUST00000030056 Ensembl:ENSMUST00000107372
Ensembl:ENSMUST00000107377 GeneID:21923 KEGG:mmu:21923
UCSC:uc008thg.2 GeneTree:ENSGT00690000102056 HOGENOM:HOG000234355
InParanoid:Q80YX1 NextBio:301496 Bgee:Q80YX1 CleanEx:MM_TNC
Genevestigator:Q80YX1 GermOnline:ENSMUSG00000028364 Uniprot:Q80YX1
Length = 2110
Score = 147 (56.8 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 93/368 (25%), Positives = 128/368 (34%)
Query: 40 CPLRCDQRTDCQD--CLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPH 97
CP C+ R C D C+ G G +C + N+C C GVC G +
Sbjct: 190 CPGNCNLRGQCLDGQCICDEGFTG--EDCSQLACPNDCNDQGR----CVNGVCVCFEG-Y 242
Query: 98 QAPQCPRSCSAYTQCSTCLRHAHC--GWCALQRDTTG---GMGVCTXXXXXXXXXXXXXX 152
P C CS H C G C + G +C
Sbjct: 243 AGPDCGLEVCP-VPCSE--EHGMCVDGRCVCKDGFAGEDCNEPLCLNNCYNRGRCVENEC 299
Query: 153 TCDILFYQTYPDQVIEVNNNDSFSWNYVKCPPENECLNDHHTCDP--QSEQCVDLADGFE 210
CD F T D + ND F C+N C+ E C +L +
Sbjct: 300 VCDEGF--TGEDCSELICPNDCFD--------RGRCINGTCYCEEGFTGEDCGELTCPND 349
Query: 211 CVCGRGY--------NKSEEGGECVPV-CSQGCV-RGVCSEPDKCQCDFGYVGVNCS-IQ 259
C GRG N+ G +C C C RG C +C+CD G+ G +C +Q
Sbjct: 350 CQ-GRGQCEEGQCVCNEGFAGADCSEKRCPADCHHRGRCLN-GQCECDDGFTGADCGDLQ 407
Query: 260 CQ--CNGHADCA-GPDKLDV------CL--RCHN--HTKGPQCDK----CEPLYVGDPRD 302
C C+GH C G D C RC N H +G C + CE + G D
Sbjct: 408 CPNGCSGHGRCVNGQCVCDEGYTGEDCSQRRCPNDCHNRG-LCVQGKCICEQGFKGF--D 464
Query: 303 NGECVPCSEYCNGHTGLCINAS-LASLPFSPESGGTSELAAFLDE-GPTTRARCMHCGNH 360
E + C C+ H G C+N + ++ E + G +C+ C +
Sbjct: 465 CSE-MSCPNDCHQH-GRCVNGMCICDDDYTGEDCRDRRCPRDCSQRGRCVDGQCI-CEDG 521
Query: 361 TTGPKCED 368
TGP C +
Sbjct: 522 FTGPDCAE 529
Score = 117 (46.2 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 56/199 (28%), Positives = 84/199 (42%)
Query: 185 ENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV-CSQGCV-RGVCSEP 242
+ C D C Q +CVD G +C+C G+ G +C + C C G C
Sbjct: 498 DRRCPRD---CS-QRGRCVD---G-QCICEDGFT----GPDCAELSCPSDCHGHGRCVN- 544
Query: 243 DKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLD--VCLRCHNHTKGPQCDK--CEPLYVG 298
+C C G+ G +C Q +C +DC G + + C+ CH G C + C P
Sbjct: 545 GQCICHEGFTGKDCKEQ-RCP--SDCHGQGRCEDGQCI-CHEGFTGLDCGQRSC-P---N 596
Query: 299 DPRDNGECVPCSEYCN-GHTGL-CINASLAS-LPFSPESGGTSELAAFLDEGPTTRARCM 355
D + G+CV CN G+TG+ C S L + + T LA + +E T M
Sbjct: 597 DCSNQGQCVSGRCICNEGYTGIDCSEVSPPKDLIVTEVTEETVNLA-WDNEMRVTEYLIM 655
Query: 356 HCGNHTTGPKCEDCVEGKE 374
+ H G + + V G +
Sbjct: 656 YTPTHADGLEMQFRVPGDQ 674
Score = 65 (27.9 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 22/80 (27%), Positives = 32/80 (40%)
Query: 39 SCPLRCDQRTDCQD--CLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGP 96
+CP C R C++ C+ + G G +C S C + + C G C G
Sbjct: 345 TCPNDCQGRGQCEEGQCVCNEGFAGA--DC--SE--KRCPADCHHRGRCLNGQCECDDGF 398
Query: 97 HQAP----QCPRSCSAYTQC 112
A QCP CS + +C
Sbjct: 399 TGADCGDLQCPNGCSGHGRC 418
Score = 44 (20.5 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 31 NIKLKTGSSCPLRCDQRTDCQDCLTSSGGEGGWHE 65
NIKL GS C + + + +D + G + E
Sbjct: 55 NIKLPMGSQCSVDLESASGEKDLTPTPESSGSFQE 89
>UNIPROTKB|Q22C00 [details] [associations]
symbol:TTHERM_01081690 "Putative uncharacterized protein"
species:312017 "Tetrahymena thermophila SB210" [GO:0004252
"serine-type endopeptidase activity" evidence=ISS]
InterPro:IPR000334 InterPro:IPR000742 Pfam:PF02015 SMART:SM00181
GO:GO:0005975 GO:GO:0004252 InterPro:IPR015500 PANTHER:PTHR10795
InterPro:IPR006212 InterPro:IPR009030 SMART:SM00261 SUPFAM:SSF57184
GO:GO:0008810 Gene3D:2.40.40.10 InterPro:IPR014733
InterPro:IPR009009 SUPFAM:SSF50685 EMBL:GG662684
RefSeq:XP_001030472.1 ProteinModelPortal:Q22C00
EnsemblProtists:EAR82809 GeneID:7842605 KEGG:tet:TTHERM_01081690
ProtClustDB:CLSZ2499145 Uniprot:Q22C00
Length = 548
Score = 136 (52.9 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 49/194 (25%), Positives = 68/194 (35%)
Query: 187 ECLNDHHTCDPQSEQCVDLADGFECV-CGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKC 245
+C N TCDP + C D +C C G+ S G+C C+ C C
Sbjct: 306 QCTN--FTCDPTCKTCSASNDANKCTSCNTGHYLSSNPGQCT-ACTPSLNCQECYNSSTC 362
Query: 246 -QCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNG 304
C GYV + + Q C+ C C + QC C + D G
Sbjct: 363 TSCVKGYVLIGNTCQATCDS-----------TCKTCSKNQDATQCTSCNSGFYLDGTTVG 411
Query: 305 ECVPCSEYCNGHTGL--CINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHC----- 357
CV CS+ C T C+N S ++ S G + T+ C+ C
Sbjct: 412 SCVQCSQNCISCTSKNNCLNCSNNTILVS---GQCQSCTSPCQTCQTSVTNCLSCVQGYT 468
Query: 358 --GNHTTGPKCEDC 369
GN T +DC
Sbjct: 469 LKGNICTPTDTKDC 482
>MGI|MGI:96743 [details] [associations]
symbol:Lamb1 "laminin B1" species:10090 "Mus musculus"
[GO:0005178 "integrin binding" evidence=IMP] [GO:0005201
"extracellular matrix structural constituent" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0005604 "basement membrane"
evidence=ISO;IDA] [GO:0005605 "basal lamina" evidence=IDA]
[GO:0005606 "laminin-1 complex" evidence=ISO;IDA] [GO:0005607
"laminin-2 complex" evidence=ISO] [GO:0005615 "extracellular space"
evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IDA] [GO:0007566
"embryo implantation" evidence=IMP] [GO:0007611 "learning or
memory" evidence=NAS] [GO:0016477 "cell migration" evidence=IMP]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0030335 "positive
regulation of cell migration" evidence=ISO] [GO:0031012
"extracellular matrix" evidence=ISO] [GO:0031175 "neuron projection
development" evidence=ISO;IDA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=ISO] [GO:0042476
"odontogenesis" evidence=ISO] [GO:0043208 "glycosphingolipid
binding" evidence=IDA] [GO:0043256 "laminin complex" evidence=IDA]
[GO:0043257 "laminin-8 complex" evidence=ISO] [GO:0043259
"laminin-10 complex" evidence=ISO;IPI] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IDA] [GO:0070062 "extracellular
vesicular exosome" evidence=ISO] MGI:MGI:96743 GO:GO:0048471
GO:GO:0016477 GO:GO:0007155 PROSITE:PS00022 GO:GO:0007611
Reactome:REACT_127416 GO:GO:0005178 PROSITE:PS01186 GO:GO:0007162
GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0031175 GO:GO:0042476
GO:GO:0007566 InterPro:IPR009053 SUPFAM:SSF46579 GO:GO:0005201
GO:GO:0043208 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005606 GO:GO:0043259 eggNOG:NOG241384
OrthoDB:EOG44BB1B GO:GO:0005607 GO:GO:0043257
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
HOVERGEN:HBG052301 ChiTaRS:LAMB1 EMBL:M15525 EMBL:CR974423
EMBL:CT571245 EMBL:X05212 IPI:IPI00988644 PIR:A26413
UniGene:Mm.172674 PDB:4AQS PDBsum:4AQS ProteinModelPortal:P02469
SMR:P02469 MINT:MINT-1206337 STRING:P02469 PhosphoSite:P02469
PaxDb:P02469 PRIDE:P02469 Ensembl:ENSMUST00000169088
InParanoid:P02469 Bgee:P02469 CleanEx:MM_LAMB1-1
Genevestigator:P02469 GermOnline:ENSMUSG00000002900 Uniprot:P02469
Length = 1786
Score = 138 (53.6 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 66/217 (30%), Positives = 83/217 (38%)
Query: 181 KCPPENECLNDHHTCDPQSEQCVDLAD--GFECV-CGRGYNKSEEGGECVPV-CS-QGCV 235
+C P+ + CDP QC + G C C G G C P C QG
Sbjct: 774 ECDPQGSLSS---VCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPNG-CKPCDCHLQGSA 829
Query: 236 RGVCSE-PDKC---------QCDF---GYVGVNCSIQCQCNGHA-DCAGPDKLD-VCLRC 280
C +C QCD GY G CQCNGHA DC D + CL C
Sbjct: 830 SAFCDAITGQCHCFQGIYARQCDRCLPGYWGFPSCQPCQCNGHALDC---DTVTGECLSC 886
Query: 281 HNHTKGPQCDKCEPLYVGDPR-DNGE-CVPCSEYCNGHTGLCINASLASLPFSPESGGTS 338
++T G C++C Y GDP +G+ C PC +G S P T
Sbjct: 887 QDYTTGHNCERCLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQFARSCYQDPV------TL 940
Query: 339 ELAAFLDEGPTTRARCMHC-----GNHTT-GPKCEDC 369
+LA D G +RC C GN + G C+ C
Sbjct: 941 QLACVCDPG-YIGSRCDDCASGFFGNPSDFGGSCQPC 976
Score = 125 (49.1 bits), Expect = 0.00040, P = 0.00040
Identities = 54/178 (30%), Positives = 72/178 (40%)
Query: 211 CVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAG 270
CVC GY G C C G P DFG G +C CQC+ + D
Sbjct: 944 CVCDPGYI----GSRC-----DDCASGFFGNPS----DFG--G-SCQ-PCQCHHNIDTTD 986
Query: 271 PDKLDV----CLRCHNHTKGPQCDKCEPLYVGDP--RDNGECVPCS------EYCNGHTG 318
P+ D CL+C HT+G C C+ Y GD +D +CV C+ E+CNG
Sbjct: 987 PEACDKETGRCLKCLYHTEGDHCQLCQYGYYGDALRQDCRKCV-CNYLGTVKEHCNGSDC 1045
Query: 319 LCINAS--LASLP--FSPE----SGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCED 368
C A+ + LP + T +LA+ GP C H+ GP C +
Sbjct: 1046 HCDKATGQCSCLPNVIGQNCDRCAPNTWQLASGTGCGP-----CNCNAAHSFGPSCNE 1098
Score = 52 (23.4 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 353 RCMHCGNHTTGPKCEDCVEG 372
RC+ C HT G C+ C G
Sbjct: 996 RCLKCLYHTEGDHCQLCQYG 1015
>UNIPROTKB|G3MXC3 [details] [associations]
symbol:G3MXC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 PROSITE:PS00010
GeneTree:ENSGT00700000104076 Gene3D:3.90.290.10 InterPro:IPR017878
Pfam:PF00683 SUPFAM:SSF57581 PROSITE:PS51364 EMBL:DAAA02047083
EMBL:DAAA02047084 EMBL:DAAA02047085 EMBL:DAAA02047086
EMBL:DAAA02047087 EMBL:DAAA02047088 Ensembl:ENSBTAT00000063872
Uniprot:G3MXC3
Length = 1280
Score = 140 (54.3 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 50/159 (31%), Positives = 65/159 (40%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG--CVRG 237
C NECL C P E C++ F C C GY G C+ V CS+ C G
Sbjct: 716 CQDVNECLEGDF-CFPHGE-CLNTDGSFACTCAPGYRPGPRGASCLDVDECSEEDLCQSG 773
Query: 238 VCSEPD---KCQCDFGY-VG---VNC-SI-QCQCNGHADCAGPDKLDVCLRCHNHTKGPQ 288
+C+ D +C C G+ G +C I +CQ G A C RC N +
Sbjct: 774 ICTNTDGSFECICPPGHRAGPDLASCLDIDECQEYGPAICGAQ-------RCENTPGSYR 826
Query: 289 CDK-CEPLYVGDP----RDNGECVPCSEYCNGHTGLCIN 322
C C+P Y P +D EC S +C H +C N
Sbjct: 827 CTPACDPGYQPTPGGGCQDVDECRNRS-FCGAHA-VCQN 863
Score = 132 (51.5 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 45/151 (29%), Positives = 61/151 (40%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG---CVR 236
C +EC C P +C + F CVCG G+ G EC+ V C Q C R
Sbjct: 593 CIDVDECRRVPTPCAPG--RCENTPGSFRCVCGPGFRAGPRGTECLDVDECIQSPGLCGR 650
Query: 237 GVCSE-PD--KCQCDFGYVGVNCSIQC-QCNGHADCAGPDKLDVCLRCHNHTKGPQCDKC 292
GVC P +C C G+ G C +C GP + D + H P +
Sbjct: 651 GVCENLPGSFRCVCPAGFRGSACEEDVDECAQEPPPCGPGRCDNTVGSF-HCACPAGFRS 709
Query: 293 EPLYVGDP-RDNGECVPCSEYCNGHTGLCIN 322
G P +D EC+ ++C H G C+N
Sbjct: 710 RG--PGAPCQDVNECLE-GDFCFPH-GECLN 736
>UNIPROTKB|G3V6X3 [details] [associations]
symbol:Ntn3 "Netrin 2-like (Chicken)" species:10116 "Rattus
norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] InterPro:IPR001134 PROSITE:PS50189
RGD:619811 GO:GO:0005576 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 EMBL:CH473948
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 CTD:4917 KO:K06844
OMA:TASPLCW GeneTree:ENSGT00700000104042 RefSeq:NP_446184.1
UniGene:Rn.95949 Ensembl:ENSRNOT00000009735 GeneID:114524
KEGG:rno:114524 NextBio:618679 Uniprot:G3V6X3
Length = 580
Score = 139 (54.0 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 39/122 (31%), Positives = 53/122 (43%)
Query: 259 QCQCNGHAD-CAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDP--RDNGE----CVPCSE 311
+C+CNGH+ C + C + T+GP C +C+P Y P R G+ C+ CS
Sbjct: 254 RCKCNGHSSRCLMDTHGHLVCDCQHGTEGPDCSRCKPFYCDRPWQRATGQEAHACLACS- 312
Query: 312 YCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCV 370
CNGH C N L L SGG C++C ++T G C C
Sbjct: 313 -CNGHARRCRFNMELYRLS-GRRSGGV----------------CLNCRHNTAGRHCHYCR 354
Query: 371 EG 372
EG
Sbjct: 355 EG 356
Score = 39 (18.8 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 7/16 (43%), Positives = 8/16 (50%)
Query: 192 HHTCDPQSEQCVDLAD 207
+H CDP Q AD
Sbjct: 64 NHVCDPSDPQRAHSAD 79
>UNIPROTKB|E1C1G8 [details] [associations]
symbol:FBLN5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004888 "transmembrane signaling receptor activity"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0007596 "blood coagulation" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0034394 "protein
localization to cell surface" evidence=IEA] [GO:0048251 "elastic
fiber assembly" evidence=IEA] [GO:0071953 "elastic fiber"
evidence=IEA] [GO:2000121 "regulation of removal of superoxide
radicals" evidence=IEA] InterPro:IPR000742 InterPro:IPR001491
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF07645 PRINTS:PR00907
PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179 InterPro:IPR000152
GO:GO:0005737 GO:GO:0005615 GO:GO:0016020 GO:GO:0007596
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS01186 PROSITE:PS00010
GO:GO:0034394 GO:GO:0004888 GO:GO:0048251 GO:GO:2000121
InterPro:IPR026823 Pfam:PF12662 GeneTree:ENSGT00700000104291
GO:GO:0071953 CTD:10516 OMA:IKGPRDI EMBL:AADN02003653
IPI:IPI00578026 RefSeq:XP_421323.1 UniGene:Gga.10096
ProteinModelPortal:E1C1G8 Ensembl:ENSGALT00000017485 GeneID:423413
KEGG:gga:423413 NextBio:20825887 Uniprot:E1C1G8
Length = 444
Score = 134 (52.2 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 41/149 (27%), Positives = 66/149 (44%)
Query: 181 KCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQGCVRGV 238
+C +EC +D H C+P ++ C++ G+ C C GY E G+C+ + C G + +
Sbjct: 120 QCADIDECASDSHQCNP-TQICINTEGGYTCSCTEGYWLLE--GQCLDIDECRYGYCQQL 176
Query: 239 CSE-PDK--CQCDFGYV----GVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDK 291
C+ P C C+ G+ G +C +C G C+ C+ +T G +
Sbjct: 177 CANVPGSYSCTCNPGFTLNDDGRSCQDVNECTGENPCS-----QTCV----NTYGSFLCR 227
Query: 292 CEPLYVGDPRDNGECVPCSEYCNGHTGLC 320
CEP Y + D C E C+ LC
Sbjct: 228 CEPGYELEA-DGVNCSDMDE-CSFSEFLC 254
>RGD|3188 [details] [associations]
symbol:Notch2 "notch 2" species:10116 "Rattus norvegicus"
[GO:0001701 "in utero embryonic development" evidence=IEA;ISO]
[GO:0001709 "cell fate determination" evidence=IDA] [GO:0001890
"placenta development" evidence=ISO] [GO:0001947 "heart looping"
evidence=ISO] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA;ISO] [GO:0002437 "inflammatory response to antigenic
stimulus" evidence=IEA;ISO] [GO:0003184 "pulmonary valve
morphogenesis" evidence=IEA;ISO] [GO:0004872 "receptor activity"
evidence=TAS] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO;ISS] [GO:0005887 "integral to
plasma membrane" evidence=IEA;ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006959 "humoral
immune response" evidence=IEA;ISO] [GO:0007050 "cell cycle arrest"
evidence=IEA;ISO;ISS] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0007368 "determination of left/right symmetry"
evidence=IEA;ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA;ISO;ISS] [GO:0009887 "organ
morphogenesis" evidence=ISO;ISS] [GO:0009986 "cell surface"
evidence=IEA;ISO;ISS;TAS] [GO:0016049 "cell growth"
evidence=IEA;ISO;ISS] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0030326
"embryonic limb morphogenesis" evidence=IEA;ISO] [GO:0042060 "wound
healing" evidence=ISO] [GO:0042246 "tissue regeneration"
evidence=IEP] [GO:0043065 "positive regulation of apoptotic process"
evidence=IEA;ISO] [GO:0045672 "positive regulation of osteoclast
differentiation" evidence=ISO] [GO:0046579 "positive regulation of
Ras protein signal transduction" evidence=IEA;ISO;ISS] [GO:0046849
"bone remodeling" evidence=IEA;ISO] [GO:0050793 "regulation of
developmental process" evidence=IEA] [GO:0051059 "NF-kappaB binding"
evidence=ISO] [GO:0060413 "atrial septum morphogenesis"
evidence=IEA;ISO] [GO:0060674 "placenta blood vessel development"
evidence=IEA;ISO] [GO:0070986 "left/right axis specification"
evidence=ISO] [GO:0072602 "interleukin-4 secretion" evidence=IEA;ISO]
InterPro:IPR002110 InterPro:IPR000742 InterPro:IPR000800
InterPro:IPR001881 InterPro:IPR008297 InterPro:IPR010660
InterPro:IPR011656 InterPro:IPR018097 Pfam:PF00008 Pfam:PF00023
Pfam:PF00066 Pfam:PF06816 Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279
PRINTS:PR01452 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088
PROSITE:PS50258 SMART:SM00004 SMART:SM00179 SMART:SM00181
SMART:SM00248 InterPro:IPR000152 RGD:3188 GO:GO:0005634 GO:GO:0008285
GO:GO:0009986 GO:GO:0005887 GO:GO:0006355 GO:GO:0002437
eggNOG:COG0666 GO:GO:0016049 GO:GO:0046849 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0007219 GO:GO:0005509 GO:GO:0004872 GO:GO:0007050 GO:GO:0006351
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0043065 GO:GO:0009887
GO:GO:0030326 GO:GO:0007368 PROSITE:PS01186 GO:GO:0042246
PROSITE:PS00010 GO:GO:0006959 GO:GO:0050793 GO:GO:0001709
GO:GO:0046579 Pfam:PF12661 GO:GO:0002011 GO:GO:0072602
SUPFAM:SSF90193 HOGENOM:HOG000234369 HOVERGEN:HBG052650 KO:K02599
InterPro:IPR024600 Pfam:PF11936 CTD:4853 OrthoDB:EOG4Q58NH
InterPro:IPR022336 PRINTS:PR01985 EMBL:M93661 IPI:IPI00211689
PIR:A49128 RefSeq:NP_077334.1 UniGene:Rn.65930
ProteinModelPortal:Q9QW30 SMR:Q9QW30 STRING:Q9QW30 PhosphoSite:Q9QW30
PRIDE:Q9QW30 GeneID:29492 KEGG:rno:29492 UCSC:RGD:3188
InParanoid:Q9QW30 NextBio:609375 ArrayExpress:Q9QW30
Genevestigator:Q9QW30 GermOnline:ENSRNOG00000018835 Uniprot:Q9QW30
Length = 2471
Score = 140 (54.3 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 59/204 (28%), Positives = 73/204 (35%)
Query: 188 CLNDHHTCDPQS----EQCVDLADGFECVCGRGYNKS---EEGGECV--PVCSQG-CVRG 237
C N+ C S CVD + F C+C G+ + EC P + G CV G
Sbjct: 984 CENNIDECTESSCFNGGTCVDGINSFSCLCPVGFTGPFCLHDINECSSNPCLNSGTCVDG 1043
Query: 238 VCSEPDKCQCDFGYVGVNCSIQ---CQ---CNGHADCAGPDKLDVCLRCHNHTKGPQCDK 291
+ + +C C GY G NC C C CA CL C G CD
Sbjct: 1044 LGTY--RCTCPLGYTGKNCQTLVNLCSPSPCKNKGTCAQEKARPRCL-CPPGWDGAYCDV 1100
Query: 292 CEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTR 351
G VP C H+G+CINA P S LDE +
Sbjct: 1101 LNVSCKAAALQKG--VPVEHLCQ-HSGICINAGNTHHCQCPLGYTGSYCEEQLDECASNP 1157
Query: 352 ARCMH---CGNHTTGPKCEDCVEG 372
C H C + G +CE CV G
Sbjct: 1158 --CQHGATCSDFIGGYRCE-CVPG 1178
Score = 125 (49.1 bits), Expect = 0.00057, P = 0.00057
Identities = 54/204 (26%), Positives = 79/204 (38%)
Query: 186 NECLNDHHTCDPQSEQCVDLADGFECVCGRG-YNKS--EEGGECVPVCSQGCVRGVCS-- 240
+EC ++ C + C++ +GF C+C G ++ S + EC+ S C+ G C+
Sbjct: 684 DECASN--PCRKDAT-CINDVNGFRCMCPEGPHHPSCYSQVNECL---SSPCIHGNCTGG 737
Query: 241 -EPDKCQCDFGYVGVNCSI---QC---QCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCE 293
KC CD G+VG+NC + +C C C C C KG C
Sbjct: 738 LSGYKCLCDAGWVGINCEVDKNECLSNPCQNGGTCNNLVNGYRCT-CKKGFKGYNCQVNI 796
Query: 294 PLYVGDPRDN-GECVP-CSEY-CNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTT 350
+P N G C+ S Y C H L +P S E AA E P
Sbjct: 797 DECASNPCLNQGTCLDDVSGYTC--HCMLPYTGKNCQTVLAPCSPNPCENAAVCKEAPNF 854
Query: 351 RARCMHCGNHTTGPKC----EDCV 370
+ C G +C ++CV
Sbjct: 855 ESFTCLCAPGWQGQRCTVDVDECV 878
Score = 52 (23.4 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 21/74 (28%), Positives = 29/74 (39%)
Query: 53 CLTSSGGEGGWHECRWSSMLNECIS-PSYEALYCAGGVCGLVLGPHQAPQCPRSCSAYTQ 111
C+ S G G C ++EC S P + C V G P+ P S Y+Q
Sbjct: 668 CVCSPGFTG--QRCNID--IDECASNPCRKDATCINDVNGFRC---MCPEGPHHPSCYSQ 720
Query: 112 CSTCLR----HAHC 121
+ CL H +C
Sbjct: 721 VNECLSSPCIHGNC 734
>UNIPROTKB|Q9QW30 [details] [associations]
symbol:Notch2 "Neurogenic locus notch homolog protein 2"
species:10116 "Rattus norvegicus" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0050793 "regulation of developmental process"
evidence=IEA] InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
Pfam:PF00008 Pfam:PF00023 Pfam:PF00066 Pfam:PF06816 Pfam:PF07645
Pfam:PF07684 PIRSF:PIRSF002279 PRINTS:PR01452 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004
SMART:SM00179 SMART:SM00181 SMART:SM00248 InterPro:IPR000152
RGD:3188 GO:GO:0005634 GO:GO:0008285 GO:GO:0009986 GO:GO:0005887
GO:GO:0006355 GO:GO:0002437 eggNOG:COG0666 GO:GO:0016049
GO:GO:0046849 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0007219 GO:GO:0005509
GO:GO:0004872 GO:GO:0007050 GO:GO:0006351 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0043065 GO:GO:0009887 GO:GO:0030326
GO:GO:0007368 PROSITE:PS01186 GO:GO:0042246 PROSITE:PS00010
GO:GO:0006959 GO:GO:0050793 GO:GO:0001709 GO:GO:0046579
Pfam:PF12661 GO:GO:0002011 GO:GO:0072602 SUPFAM:SSF90193
HOGENOM:HOG000234369 HOVERGEN:HBG052650 KO:K02599
InterPro:IPR024600 Pfam:PF11936 CTD:4853 OrthoDB:EOG4Q58NH
InterPro:IPR022336 PRINTS:PR01985 EMBL:M93661 IPI:IPI00211689
PIR:A49128 RefSeq:NP_077334.1 UniGene:Rn.65930
ProteinModelPortal:Q9QW30 SMR:Q9QW30 STRING:Q9QW30
PhosphoSite:Q9QW30 PRIDE:Q9QW30 GeneID:29492 KEGG:rno:29492
UCSC:RGD:3188 InParanoid:Q9QW30 NextBio:609375 ArrayExpress:Q9QW30
Genevestigator:Q9QW30 GermOnline:ENSRNOG00000018835 Uniprot:Q9QW30
Length = 2471
Score = 140 (54.3 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 59/204 (28%), Positives = 73/204 (35%)
Query: 188 CLNDHHTCDPQS----EQCVDLADGFECVCGRGYNKS---EEGGECV--PVCSQG-CVRG 237
C N+ C S CVD + F C+C G+ + EC P + G CV G
Sbjct: 984 CENNIDECTESSCFNGGTCVDGINSFSCLCPVGFTGPFCLHDINECSSNPCLNSGTCVDG 1043
Query: 238 VCSEPDKCQCDFGYVGVNCSIQ---CQ---CNGHADCAGPDKLDVCLRCHNHTKGPQCDK 291
+ + +C C GY G NC C C CA CL C G CD
Sbjct: 1044 LGTY--RCTCPLGYTGKNCQTLVNLCSPSPCKNKGTCAQEKARPRCL-CPPGWDGAYCDV 1100
Query: 292 CEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTR 351
G VP C H+G+CINA P S LDE +
Sbjct: 1101 LNVSCKAAALQKG--VPVEHLCQ-HSGICINAGNTHHCQCPLGYTGSYCEEQLDECASNP 1157
Query: 352 ARCMH---CGNHTTGPKCEDCVEG 372
C H C + G +CE CV G
Sbjct: 1158 --CQHGATCSDFIGGYRCE-CVPG 1178
Score = 125 (49.1 bits), Expect = 0.00057, P = 0.00057
Identities = 54/204 (26%), Positives = 79/204 (38%)
Query: 186 NECLNDHHTCDPQSEQCVDLADGFECVCGRG-YNKS--EEGGECVPVCSQGCVRGVCS-- 240
+EC ++ C + C++ +GF C+C G ++ S + EC+ S C+ G C+
Sbjct: 684 DECASN--PCRKDAT-CINDVNGFRCMCPEGPHHPSCYSQVNECL---SSPCIHGNCTGG 737
Query: 241 -EPDKCQCDFGYVGVNCSI---QC---QCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCE 293
KC CD G+VG+NC + +C C C C C KG C
Sbjct: 738 LSGYKCLCDAGWVGINCEVDKNECLSNPCQNGGTCNNLVNGYRCT-CKKGFKGYNCQVNI 796
Query: 294 PLYVGDPRDN-GECVP-CSEY-CNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTT 350
+P N G C+ S Y C H L +P S E AA E P
Sbjct: 797 DECASNPCLNQGTCLDDVSGYTC--HCMLPYTGKNCQTVLAPCSPNPCENAAVCKEAPNF 854
Query: 351 RARCMHCGNHTTGPKC----EDCV 370
+ C G +C ++CV
Sbjct: 855 ESFTCLCAPGWQGQRCTVDVDECV 878
Score = 52 (23.4 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 21/74 (28%), Positives = 29/74 (39%)
Query: 53 CLTSSGGEGGWHECRWSSMLNECIS-PSYEALYCAGGVCGLVLGPHQAPQCPRSCSAYTQ 111
C+ S G G C ++EC S P + C V G P+ P S Y+Q
Sbjct: 668 CVCSPGFTG--QRCNID--IDECASNPCRKDATCINDVNGFRC---MCPEGPHHPSCYSQ 720
Query: 112 CSTCLR----HAHC 121
+ CL H +C
Sbjct: 721 VNECLSSPCIHGNC 734
>UNIPROTKB|F1MAP4 [details] [associations]
symbol:Megf10 "Protein Megf10" species:10116 "Rattus
norvegicus" [GO:0001891 "phagocytic cup" evidence=IEA] [GO:0014719
"satellite cell activation" evidence=IEA] [GO:0014816 "satellite
cell differentiation" evidence=IEA] [GO:0014841 "satellite cell
proliferation" evidence=IEA] [GO:0034109 "homotypic cell-cell
adhesion" evidence=IEA] [GO:0043654 "recognition of apoptotic cell"
evidence=IEA] [GO:0048641 "regulation of skeletal muscle tissue
development" evidence=IEA] [GO:0051147 "regulation of muscle cell
differentiation" evidence=IEA] [GO:0055001 "muscle cell
development" evidence=IEA] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 RGD:735084
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891 GO:GO:0048641
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
GO:GO:0055001 GO:GO:0034109 GO:GO:0014816 Pfam:PF12661
GeneTree:ENSGT00690000101691 GO:GO:0043654 GO:GO:0051147 CTD:84466
OMA:FGCNLTC GO:GO:0014719 GO:GO:0014841 EMBL:AC095558
IPI:IPI00371424 RefSeq:NP_001094127.1 UniGene:Rn.224926
Ensembl:ENSRNOT00000037901 GeneID:291445 KEGG:rno:291445
NextBio:632612 Uniprot:F1MAP4
Length = 1145
Score = 139 (54.0 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 75/296 (25%), Positives = 103/296 (34%)
Query: 42 LRCDQRTDCQ-DCLTSSGGEGGWHECR--WSSML-NECISPSYEALYCAGGVCGLVLGPH 97
++CD+R C D S G C+ WS + NE SP + Y G C +
Sbjct: 362 IKCDKRCPCHLDNTHSCHPMSGECGCKPGWSGLYCNETCSPGF---Y--GEACQQICSCQ 416
Query: 98 QAPQCPRSCSAYTQCSTCLRHAHCGW-CALQRDTTGGMGVCTXXXXXXXXXXXXXXTCDI 156
C S S C+ + C C L R C C
Sbjct: 417 NGADCD-SVSGRCACAPGFKGTDCSTPCPLGRYGINCSSRCGCKNDAVCSPVDGSCICKA 475
Query: 157 LFYQTYPDQVIEVNNND-SFSWNYV-KCPPENEC--LNDHHTCDP--QSEQC-VDLADG- 208
++ D I + F N +C C L+ TC P + E+C DG
Sbjct: 476 GWHGV--DCSISCPSGTWGFGCNLTCQCLNGGACNTLDGTCTCAPGWRGEKCEFPCQDGT 533
Query: 209 FECVCGRGYNKSEEGGECVPVCSQ-GCVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHAD 267
+ C + S G C P C+ G C G G NCS+ C C A
Sbjct: 534 YGLNCAERCDCSHADG-CHPTTGHCRCLPGWSGVHCDSVCAEGRWGPNCSLPCYCKNGAS 592
Query: 268 CAGPDKLDVCLRCHNHTKGPQCDK-CEPLYVGD--PRDNGECVPCSEYCNGHTGLC 320
C+ PD +C C +G C + C P + G + +CV S C+ TGLC
Sbjct: 593 CS-PDD-GIC-ECAPGFRGTTCQRICSPGFYGHRCSQTCPQCVHSSGPCHHITGLC 645
Score = 136 (52.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 61/234 (26%), Positives = 88/234 (37%)
Query: 160 QTYP---DQVIEVNNNDSFSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRG 216
++YP DQ+ + D +W KC + T E+ + +C C G
Sbjct: 46 ESYPHPFDQIYYTSCTDILNW--FKCTRHRV---SYRTAYRHGEKTMYRRKS-QC-CP-G 97
Query: 217 YNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQ-------CNGHADCA 269
+ +S + CVP C+ CV G C P+ CQC+ G+ G NCS C C+ C
Sbjct: 98 FYESRD--VCVPHCADKCVHGRCIAPNTCQCEPGWGGTNCSSACDGDHWGPHCSSRCQCK 155
Query: 270 GPDKLD-VCLRCHNHT--KGPQC-DKCEPLYVGDPRDNGECVPCSEYCNGHTGLCINASL 325
+ + CH +G +C D+CE G+ C + C G +
Sbjct: 156 NRALCNPITGACHCAAGYRGWRCEDRCEQGTYGND--------CHQRCQCQNGATCDHIT 207
Query: 326 ASLPFSPESGGT--SELAAFLDEGPTTRARCMHCGN-----HTTGPKCEDCVEG 372
SP G +L GP RC C N H TG +C C G
Sbjct: 208 GECRCSPGYTGAFCEDLCPPGKHGPQCEQRCP-CQNGGVCHHVTG-ECS-CPSG 258
Score = 112 (44.5 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 34/112 (30%), Positives = 47/112 (41%)
Query: 211 CVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAG 270
C C G S GEC C+ G C++ +C G+ G +C++ CQC ADC
Sbjct: 716 CNCHNGAFCSAYDGECK--CTPGWTGLYCTQ----RCPLGFYGKDCALVCQCQNGADC-- 767
Query: 271 PDKLDVCLRCHNHTKGPQCD-KCEP-LYVGDPRDNGECVPCSEYCNGHTGLC 320
D + C G C+ KC Y R +C+ S C+ TG C
Sbjct: 768 -DHISGQCTCRTGFMGRHCEQKCPAGTYGYGCRQICDCLNNST-CDHITGTC 817
Score = 94 (38.1 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 40/150 (26%), Positives = 54/150 (36%)
Query: 188 CLNDHHTCDPQSEQCVDLADGFE-CVCGRGYNKSEEGGECVPVCSQGCVR--GVCSE-PD 243
C N +C P C + A GF C R + G C C Q CV G C
Sbjct: 587 CKNGA-SCSPDDGIC-ECAPGFRGTTCQRICSPGFYGHRCSQTCPQ-CVHSSGPCHHITG 643
Query: 244 KCQCDFGYVGVNCSIQC-------QCNGHADCAGP---DKLDVCLRCHNHTKGPQCDK-C 292
C C G+ G C+ C C G C + +D +C+ G C + C
Sbjct: 644 LCDCLPGFTGALCNEVCPSGRFGKNCAGVCTCTNNGTCNPIDRSCQCYPGWIGSDCSQPC 703
Query: 293 EPLYVGDPRDNGECVPCSE--YCNGHTGLC 320
P + G P C C +C+ + G C
Sbjct: 704 PPAHWG-PNCIHTC-NCHNGAFCSAYDGEC 731
Score = 74 (31.1 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 32/103 (31%), Positives = 40/103 (38%)
Query: 37 GSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNEC-ISPSYEALYCAGGVCGLVLG 95
G C RC+Q T DC + G C + EC SP Y +C +C G
Sbjct: 175 GWRCEDRCEQGTYGNDCHQRCQCQNG-ATC--DHITGECRCSPGYTGAFCED-LCPP--G 228
Query: 96 PHQAPQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMG-VC 137
H PQC + C C H G C+ +G MG VC
Sbjct: 229 KH-GPQCEQRCPCQNG-GVC--HHVTGECSCP---SGWMGTVC 264
Score = 54 (24.1 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 18/69 (26%), Positives = 23/69 (33%)
Query: 73 NEC-ISPSYEALYCAGGVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHC-----GWCAL 126
N C P + C+ G GPH + +C C C+ HC GW
Sbjct: 122 NTCQCEPGWGGTNCSSACDGDHWGPHCSSRC--QCKNRALCNPITGACHCAAGYRGWRCE 179
Query: 127 QRDTTGGMG 135
R G G
Sbjct: 180 DRCEQGTYG 188
>UNIPROTKB|E2RQ32 [details] [associations]
symbol:MEGF10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0055001 "muscle cell development"
evidence=IEA] [GO:0051147 "regulation of muscle cell
differentiation" evidence=IEA] [GO:0048641 "regulation of skeletal
muscle tissue development" evidence=IEA] [GO:0043654 "recognition
of apoptotic cell" evidence=IEA] [GO:0034109 "homotypic cell-cell
adhesion" evidence=IEA] [GO:0014841 "satellite cell proliferation"
evidence=IEA] [GO:0014816 "satellite cell differentiation"
evidence=IEA] [GO:0014719 "satellite cell activation" evidence=IEA]
[GO:0001891 "phagocytic cup" evidence=IEA] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891 GO:GO:0048641
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
GO:GO:0055001 GO:GO:0034109 GO:GO:0014816 Pfam:PF12661
GeneTree:ENSGT00690000101691 GO:GO:0043654 GO:GO:0051147
OMA:FGCNLTC GO:GO:0014719 GO:GO:0014841 EMBL:AAEX03007755
ProteinModelPortal:E2RQ32 Ensembl:ENSCAFT00000000947 Uniprot:E2RQ32
Length = 1150
Score = 139 (54.0 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 52/177 (29%), Positives = 69/177 (38%)
Query: 213 CGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQ-------CNGH 265
C G+ +S E CVP C+ CV G C P+ CQC+ G+ G NCS C C+
Sbjct: 94 CCPGFYESRE--MCVPHCADKCVHGRCIAPNTCQCEPGWGGTNCSSACDGDHWGPHCSSR 151
Query: 266 ADCAGPDKLD-VCLRCHNHT--KGPQC-DKCEP-LYVGDPRDNGECVPCSEYCNGHTGLC 320
C + + CH +G +C D+CE Y D +C + C+ TG C
Sbjct: 152 CQCKNGALCNPITGACHCAAGFRGWRCEDRCEQGTYGNDCHQRCQCQNGAT-CDHVTGEC 210
Query: 321 INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGN-----HTTGPKCEDCVEG 372
P +L GP RC C N H TG +C C G
Sbjct: 211 ------RCPPGYTGAFCEDLCPPGKHGPQCEQRCP-CQNGGICHHVTG-ECS-CPSG 258
Score = 138 (53.6 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 72/296 (24%), Positives = 104/296 (35%)
Query: 42 LRCDQRTDCQ-DCLTSSGGEGGWHECR--WSSML-NECISPSYEALYCAGGVCGLVLGPH 97
++CD+R C D S G C+ WS + NE SP + G C + H
Sbjct: 362 IKCDKRCPCHLDNTHSCHPMSGECACKPGWSGLYCNETCSPGF-----FGEACQQICSCH 416
Query: 98 QAPQCPRSCSAYTQCSTCLRHAHCGW-CALQRDTTGGMGVCTXXXXXXXXXXXXXXTCDI 156
C S + C+ + C C L+ +C TC
Sbjct: 417 NGADCD-SVTGKCICAPGFKGIDCSIPCPLETYGINCSSLCGCKNDAVCSPVDGSCTCKA 475
Query: 157 LFYQTYPDQVIEVNNND-SFSWNYV-KCPPENECLNDHHTCD--P--QSEQC-VDLADG- 208
++ D I + FS N +C C TC P + ++C + DG
Sbjct: 476 GWHGV--DCSISCPSGTWGFSCNLTCQCLHGGACNTQDGTCTCAPGWRGDKCELPCQDGT 533
Query: 209 FECVCGRGYNKSEEGGECVPVCSQ-GCVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHAD 267
+ C + S G C C+ G C G G NCS+ C C A
Sbjct: 534 YGLNCAERCDCSHADG-CHSTTGHCRCLPGWSGVHCDSVCAEGRWGPNCSLPCYCKNGAS 592
Query: 268 CAGPDKLDVCLRCHNHTKGPQCDK-CEPLYVGD--PRDNGECVPCSEYCNGHTGLC 320
C+ PD +C C +G C + C P + G + +CV S C+ TGLC
Sbjct: 593 CS-PDD-GIC-ECAPGFRGTTCQRICSPGFYGHRCSQTCPQCVHSSGPCHHITGLC 645
>UNIPROTKB|E1BPT8 [details] [associations]
symbol:LOC789485 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0072104 "glomerular capillary formation"
evidence=IEA] [GO:0048663 "neuron fate commitment" evidence=IEA]
[GO:0048661 "positive regulation of smooth muscle cell
proliferation" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
InterPro:IPR022331 Pfam:PF00008 Pfam:PF00066 Pfam:PF06816
Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279 PRINTS:PR01452
PRINTS:PR01986 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088
PROSITE:PS50258 SMART:SM00004 SMART:SM00179 SMART:SM00181
SMART:SM00248 InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0048661 GO:GO:0030900 GO:GO:0045665
GO:GO:0007219 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 PROSITE:PS00010 GO:GO:0048663 GO:GO:0072104
Pfam:PF12661 GeneTree:ENSGT00700000104305 SUPFAM:SSF90193 KO:K02599
InterPro:IPR024600 Pfam:PF11936 OMA:LTFTCHC EMBL:DAAA02019144
EMBL:DAAA02019145 IPI:IPI00924414 RefSeq:XP_003586294.1
Ensembl:ENSBTAT00000060960 GeneID:789485 KEGG:bta:789485
Uniprot:E1BPT8
Length = 2332
Score = 142 (55.0 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 59/212 (27%), Positives = 74/212 (34%)
Query: 182 CPPENE---CLNDHHTCDPQS----EQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGC 234
CPP C D C P S CVD + F C+C GY + E P S+ C
Sbjct: 913 CPPGYSGFHCEQDLPDCSPSSCFNGGTCVDGVNSFTCLCRPGYTGTHCQHEADPCLSRPC 972
Query: 235 VRG-VCS--EPD-KCQCDFGYVGVNCSIQ---CQ---CNGHADCAGPDKLDVCLRCHNHT 284
+ G VC+ P C C G+ G C C C CA CL C
Sbjct: 973 MHGGVCTAAHPGFHCACPDGFTGAQCQTLVDWCSRSPCQNGGRCARTGASFYCL-CPPGW 1031
Query: 285 KGPQCD-KCEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAF 343
G CD + P + VP + C G C++ + PE S
Sbjct: 1032 SGRLCDIRSLPCREAAAQIG---VPTEQLCQAG-GQCVDKDSSHYCVCPEGHTGSHCEQE 1087
Query: 344 LDEGPTTRARCMH---CGNHTTGPKCEDCVEG 372
+D P C H C +T G CE C G
Sbjct: 1088 MD--PCLAQPCQHGGTCRGYTGGYVCE-CPAG 1116
Score = 138 (53.6 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 94/368 (25%), Positives = 133/368 (36%)
Query: 31 NIKLKTGSSCPLRCDQRTDCQDCLTSSGGEGGWH-ECRWSSMLNECISPSYEALY--CAG 87
N+++ +S P C + C D GE G+ C S+ C+ PS+ C+
Sbjct: 656 NVEINECASNP--CGEGASCVD------GENGFRCLCPPGSLPPLCLPPSHPCAQEPCSH 707
Query: 88 GVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHCGW--C-ALQRDTTGGMGV-CTXXXXX 143
GVC G + C S QCS L C C A T+ GMG CT
Sbjct: 708 GVCHDAPGGFRCV-CEPGWSG-PQCSQSLTRDACESHPCRAGGTCTSDGMGFRCTCPPGV 765
Query: 144 XXXXXXXXXTCDIL------FYQTYPDQVIEVNNNDSFSWNYVKCPPE-NECLNDHHTCD 196
C + ++ P Q+ + W +C + +EC + C
Sbjct: 766 QGHQCELLSPCTPNPCEHGGYCESAPGQMAVCSCTPG--WQGPRCQQDVDECASPS-PCG 822
Query: 197 PQSEQCVDLADGFECVCGRGYNK---SEEGGECVP-VCSQG--CVRGVCSEPDKCQCDFG 250
P C +LA F C C GY+ ++ +C P C G C GV S C C G
Sbjct: 823 PHGT-CTNLAGSFSCTCHEGYSGPSCDQDIDDCDPNPCLNGGSCQDGVGSF--SCSCLPG 879
Query: 251 YVGVNCSIQC-QCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGD--PRDNGECV 307
+ G C+ +C + C C +H C C P Y G +D +C
Sbjct: 880 FAGPRCARDVDECLS-SPCGSGT-------CTDHVASFTCT-CPPGYSGFHCEQDLPDCS 930
Query: 308 PCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTT---GP 364
P S + NG G C++ + S G T + P CMH G T G
Sbjct: 931 PSSCF-NG--GTCVDG-VNSFTCLCRPGYTGTHCQH-EADPCLSRPCMHGGVCTAAHPGF 985
Query: 365 KCEDCVEG 372
C C +G
Sbjct: 986 HCA-CPDG 992
Score = 134 (52.2 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 51/157 (32%), Positives = 62/157 (39%)
Query: 201 QCVDLADGFECVCGRGYNKS--EEG-GECVP-VCSQG-CVRGVCSEPDKCQCDFGYVGVN 255
+CVD DG+EC C G+ + E +C P C G CV G+ S C C GY G+
Sbjct: 522 KCVDQPDGYECRCAEGFEGTVCERNVDDCSPDPCHHGRCVDGIASF--SCACAPGYTGMR 579
Query: 256 CSIQ---CQ---CNGHADCAGPDKLDVCL-RCHNHTKGPQC----DKC--EPLYVGDPRD 302
C Q C+ C C D +D L RC T G C D C P G RD
Sbjct: 580 CESQVDECRSQPCRHGGKCL--DLVDKYLCRCPPGTTGVNCEVNTDDCASNPCTFGVCRD 637
Query: 303 NGECVPCSEYCN-GHTGLCINASLASLPFSPESGGTS 338
C C G TG N + +P G S
Sbjct: 638 GINRYDC--VCQPGFTGPLCNVEINECASNPCGEGAS 672
>MGI|MGI:97363 [details] [associations]
symbol:Notch1 "notch 1" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA;IMP] [GO:0001047 "core
promoter binding" evidence=IDA] [GO:0001190 "RNA polymerase II
transcription factor binding transcription factor activity involved
in positive regulation of transcription" evidence=IDA] [GO:0001669
"acrosomal vesicle" evidence=ISO] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0001837 "epithelial to mesenchymal transition"
evidence=IMP] [GO:0001889 "liver development" evidence=IMP]
[GO:0001947 "heart looping" evidence=IGI] [GO:0002040 "sprouting
angiogenesis" evidence=IMP] [GO:0002051 "osteoblast fate
commitment" evidence=NAS] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=ISO] [GO:0002193
"MAML1-RBP-Jkappa- ICN1 complex" evidence=ISO] [GO:0002437
"inflammatory response to antigenic stimulus" evidence=IGI]
[GO:0003157 "endocardium development" evidence=IMP] [GO:0003160
"endocardium morphogenesis" evidence=IMP] [GO:0003162
"atrioventricular node development" evidence=IMP] [GO:0003169
"coronary vein morphogenesis" evidence=IMP] [GO:0003180 "aortic
valve morphogenesis" evidence=ISO] [GO:0003181 "atrioventricular
valve morphogenesis" evidence=IMP] [GO:0003184 "pulmonary valve
morphogenesis" evidence=ISO] [GO:0003192 "mitral valve formation"
evidence=ISO] [GO:0003198 "epithelial to mesenchymal transition
involved in endocardial cushion formation" evidence=IMP]
[GO:0003203 "endocardial cushion morphogenesis" evidence=IMP]
[GO:0003207 "cardiac chamber formation" evidence=IMP] [GO:0003208
"cardiac ventricle morphogenesis" evidence=IMP] [GO:0003209
"cardiac atrium morphogenesis" evidence=IMP] [GO:0003213 "cardiac
right atrium morphogenesis" evidence=IMP] [GO:0003214 "cardiac left
ventricle morphogenesis" evidence=IMP] [GO:0003219 "cardiac right
ventricle formation" evidence=IMP] [GO:0003222 "ventricular
trabecula myocardium morphogenesis" evidence=IMP] [GO:0003241
"growth involved in heart morphogenesis" evidence=IMP] [GO:0003256
"regulation of transcription from RNA polymerase II promoter
involved in myocardial precursor cell differentiation"
evidence=IMP] [GO:0003264 "regulation of cardioblast proliferation"
evidence=ISO] [GO:0003270 "Notch signaling pathway involved in
regulation of secondary heart field cardioblast proliferation"
evidence=IMP] [GO:0003273 "cell migration involved in endocardial
cushion formation" evidence=IMP] [GO:0003344 "pericardium
morphogenesis" evidence=IMP] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0004857 "enzyme
inhibitor activity" evidence=IDA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IMP;IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=ISO;IDA] [GO:0005887 "integral to plasma
membrane" evidence=IC] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006959 "humoral immune response" evidence=IGI] [GO:0007219
"Notch signaling pathway" evidence=ISO;IC;IDA;IMP] [GO:0007221
"positive regulation of transcription of Notch receptor target"
evidence=ISO;IGI] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=ISO] [GO:0007368 "determination of left/right symmetry"
evidence=IMP] [GO:0007386 "compartment pattern specification"
evidence=IMP] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007440 "foregut morphogenesis" evidence=IMP] [GO:0007492
"endoderm development" evidence=IMP] [GO:0007507 "heart
development" evidence=ISO;IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=ISO;IGI] [GO:0008544 "epidermis
development" evidence=IGI] [GO:0009790 "embryo development"
evidence=ISO] [GO:0009912 "auditory receptor cell fate commitment"
evidence=IMP] [GO:0009986 "cell surface" evidence=IDA] [GO:0010001
"glial cell differentiation" evidence=IMP] [GO:0010468 "regulation
of gene expression" evidence=IMP] [GO:0010718 "positive regulation
of epithelial to mesenchymal transition" evidence=ISO;IMP]
[GO:0010812 "negative regulation of cell-substrate adhesion"
evidence=ISO] [GO:0010832 "negative regulation of myotube
differentiation" evidence=IDA] [GO:0014031 "mesenchymal cell
development" evidence=IMP] [GO:0014807 "regulation of
somitogenesis" evidence=IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0021915 "neural tube
development" evidence=IMP] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0030216 "keratinocyte differentiation" evidence=IMP]
[GO:0030279 "negative regulation of ossification" evidence=IMP]
[GO:0030324 "lung development" evidence=IMP] [GO:0030326 "embryonic
limb morphogenesis" evidence=IGI] [GO:0030334 "regulation of cell
migration" evidence=IMP] [GO:0030335 "positive regulation of cell
migration" evidence=IMP] [GO:0030513 "positive regulation of BMP
signaling pathway" evidence=IDA] [GO:0030514 "negative regulation
of BMP signaling pathway" evidence=IMP] [GO:0030900 "forebrain
development" evidence=IGI;IMP] [GO:0031069 "hair follicle
morphogenesis" evidence=IMP] [GO:0031490 "chromatin DNA binding"
evidence=IDA] [GO:0032495 "response to muramyl dipeptide"
evidence=IDA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IMP] [GO:0035914 "skeletal muscle cell differentiation"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=ISO] [GO:0042640 "anagen" evidence=IMP] [GO:0043065
"positive regulation of apoptotic process" evidence=IGI;IDA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP] [GO:0043086 "negative regulation of catalytic
activity" evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045165 "cell fate commitment" evidence=IMP]
[GO:0045596 "negative regulation of cell differentiation"
evidence=IMP] [GO:0045603 "positive regulation of endothelial cell
differentiation" evidence=ISO] [GO:0045618 "positive regulation of
keratinocyte differentiation" evidence=IGI;IDA] [GO:0045662
"negative regulation of myoblast differentiation" evidence=ISO]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=ISO;IGI;IMP] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IMP] [GO:0045687 "positive
regulation of glial cell differentiation" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IGI;IMP;IDA] [GO:0045955 "negative regulation of
calcium ion-dependent exocytosis" evidence=IMP] [GO:0046427
"positive regulation of JAK-STAT cascade" evidence=IDA] [GO:0046533
"negative regulation of photoreceptor cell differentiation"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048103 "somatic stem cell division" evidence=IGI;IDA]
[GO:0048663 "neuron fate commitment" evidence=IGI] [GO:0048708
"astrocyte differentiation" evidence=ISO] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IDA] [GO:0048715
"negative regulation of oligodendrocyte differentiation"
evidence=IDA] [GO:0048754 "branching morphogenesis of an epithelial
tube" evidence=IMP] [GO:0050678 "regulation of epithelial cell
proliferation" evidence=IMP] [GO:0050679 "positive regulation of
epithelial cell proliferation" evidence=IGI] [GO:0050767
"regulation of neurogenesis" evidence=IMP] [GO:0050768 "negative
regulation of neurogenesis" evidence=IDA] [GO:0050793 "regulation
of developmental process" evidence=IEA] [GO:0055008 "cardiac muscle
tissue morphogenesis" evidence=IMP] [GO:0060038 "cardiac muscle
cell proliferation" evidence=IMP] [GO:0060045 "positive regulation
of cardiac muscle cell proliferation" evidence=IMP] [GO:0060253
"negative regulation of glial cell proliferation" evidence=IDA]
[GO:0060317 "cardiac epithelial to mesenchymal transition"
evidence=IMP] [GO:0060411 "cardiac septum morphogenesis"
evidence=IMP] [GO:0060412 "ventricular septum morphogenesis"
evidence=ISO] [GO:0060528 "secretory columnal luminar epithelial
cell differentiation involved in prostate glandular acinus
development" evidence=IMP] [GO:0060548 "negative regulation of cell
death" evidence=IMP] [GO:0060740 "prostate gland epithelium
morphogenesis" evidence=IMP] [GO:0060768 "regulation of epithelial
cell proliferation involved in prostate gland development"
evidence=IMP] [GO:0060842 "arterial endothelial cell
differentiation" evidence=IMP] [GO:0060843 "venous endothelial cell
differentiation" evidence=IMP] [GO:0060948 "cardiac vascular smooth
muscle cell development" evidence=IMP] [GO:0060956 "endocardial
cell differentiation" evidence=IMP] [GO:0060979 "vasculogenesis
involved in coronary vascular morphogenesis" evidence=IMP]
[GO:0060982 "coronary artery morphogenesis" evidence=IMP]
[GO:0061314 "Notch signaling involved in heart development"
evidence=IGI;ISO;IMP] [GO:0061344 "regulation of cell adhesion
involved in heart morphogenesis" evidence=IC] [GO:0061384 "heart
trabecula morphogenesis" evidence=IMP] [GO:0061419 "positive
regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IDA] [GO:0070986 "left/right axis
specification" evidence=IGI] [GO:0071372 "cellular response to
follicle-stimulating hormone stimulus" evidence=ISO] [GO:0072602
"interleukin-4 secretion" evidence=IGI] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IMP] [GO:1901189 "positive regulation of ephrin receptor
signaling pathway" evidence=IC] [GO:1901201 "regulation of
extracellular matrix assembly" evidence=IMP] [GO:2000737 "negative
regulation of stem cell differentiation" evidence=ISO] [GO:2000811
"negative regulation of anoikis" evidence=ISO] [GO:2000974
"negative regulation of pro-B cell differentiation" evidence=IMP]
Reactome:REACT_99130 Reactome:REACT_81380 InterPro:IPR002110
InterPro:IPR000742 InterPro:IPR000800 InterPro:IPR001881
InterPro:IPR008297 InterPro:IPR010660 InterPro:IPR011656
InterPro:IPR018097 InterPro:IPR022362 Pfam:PF00008 Pfam:PF00023
Pfam:PF00066 Pfam:PF06816 Pfam:PF07645 Pfam:PF07684
PIRSF:PIRSF002279 PRINTS:PR01452 PRINTS:PR01984 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004
SMART:SM00179 SMART:SM00181 SMART:SM00248 InterPro:IPR000152
MGI:MGI:97363 GO:GO:0005829 GO:GO:0001708 GO:GO:0043066
GO:GO:0005576 GO:GO:0030216 GO:GO:0005654 GO:GO:0009986
GO:GO:0000139 GO:GO:0005887 GO:GO:0002437 GO:GO:0005789
GO:GO:0030324 eggNOG:COG0666 GO:GO:0031100 GO:GO:0004857
GO:GO:0043565 GO:GO:0001669 GO:GO:0032496 GO:GO:0001701
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0030900 GO:GO:0005509 GO:GO:0004872
GO:GO:0001889 GO:GO:0003700 GO:GO:0007283 Reactome:REACT_115202
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0000122 GO:GO:0043065
GO:GO:0072144 GO:GO:0007409 GO:GO:0030513 GO:GO:0045603
GO:GO:0010718 PROSITE:PS01186 GO:GO:0042246 GO:GO:0045955
GO:GO:0030335 GO:GO:0001047 GO:GO:0001190 GO:GO:0030279
GO:GO:0090090 EMBL:CH466542 GO:GO:0035116 GO:GO:0046427
PROSITE:PS00010 GO:GO:0001947 GO:GO:0070986 GO:GO:0006959
GO:GO:0042640 GO:GO:0021915 GO:GO:0060740 GO:GO:0002040
GO:GO:0003160 GO:GO:0007492 GO:GO:0060979 GO:GO:0010812
GO:GO:0035914 GO:GO:0072044 GO:GO:0072017 GO:GO:0031490
GO:GO:0048709 GO:GO:0045668 GO:GO:0002052 GO:GO:0031069
GO:GO:2000811 GO:GO:0048754 GO:GO:0050679 GO:GO:0010001
GO:GO:0010832 GO:GO:0048103 GO:GO:0060038 GO:GO:0060045
GO:GO:0003181 GO:GO:0048711 GO:GO:0045662 GO:GO:0048715
GO:GO:0030514 GO:GO:0032495 GO:GO:0003214 Pfam:PF12661
MEROPS:I63.002 GO:GO:0060411 GO:GO:0046533 GO:GO:0031960
GO:GO:0045618 GeneTree:ENSGT00700000104305 GO:GO:0060982
GO:GO:0021515 GO:GO:0007440 GO:GO:0007386 GO:GO:0097150
GO:GO:0009912 GO:GO:0003344 GO:GO:0003222 EMBL:AL732541
GO:GO:0003180 GO:GO:0003273 GO:GO:0060253 GO:GO:0003198
GO:GO:0060528 GO:GO:0072602 SUPFAM:SSF90193 GO:GO:0003219
GO:GO:0048708 GO:GO:2000974 GO:GO:2000737 GO:GO:0060842
GO:GO:0060948 GO:GO:0061419 PDB:3P3N PDB:3P3P PDBsum:3P3N
PDBsum:3P3P GO:GO:0002193 GO:GO:0002051 GO:GO:0003241
HOGENOM:HOG000234369 HOVERGEN:HBG052650 KO:K02599
InterPro:IPR024600 Pfam:PF11936 CTD:4851 OMA:HGGYNCV
OrthoDB:EOG4HX504 GO:GO:0003213 GO:GO:0003169 GO:GO:0060956
GO:GO:0007221 GO:GO:1901201 GO:GO:0003256 GO:GO:0060843 EMBL:Z11886
EMBL:AF508809 EMBL:AB100603 EMBL:BC138441 EMBL:BC138442 EMBL:L02613
EMBL:X68278 EMBL:AK154528 EMBL:AK157475 EMBL:AJ238029 EMBL:X82562
IPI:IPI00127186 IPI:IPI00322561 IPI:IPI00974755 IPI:IPI00986769
PIR:A46438 PIR:B49175 RefSeq:NP_032740.3 UniGene:Mm.290610 PDB:1YMP
PDB:2QC9 PDB:2RQZ PDB:2RR0 PDB:2RR2 PDBsum:1YMP PDBsum:2QC9
PDBsum:2RQZ PDBsum:2RR0 PDBsum:2RR2 ProteinModelPortal:Q01705
SMR:Q01705 DIP:DIP-214N IntAct:Q01705 MINT:MINT-142586
STRING:Q01705 PhosphoSite:Q01705 PaxDb:Q01705 PRIDE:Q01705
Ensembl:ENSMUST00000028288 GeneID:18128 KEGG:mmu:18128
InParanoid:Q01705 EvolutionaryTrace:Q01705 NextBio:293356
Bgee:Q01705 CleanEx:MM_NOTCH1 Genevestigator:Q01705
GermOnline:ENSMUSG00000026923 GO:GO:0003162 GO:GO:0003270
GO:GO:1901189 GO:GO:0061344 GO:GO:0060768 GO:GO:0014807
Uniprot:Q01705
Length = 2531
Score = 150 (57.9 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 59/198 (29%), Positives = 81/198 (40%)
Query: 201 QCVDLADGFECVCGRGYNKSE---EGGECVP-VCSQG-CVRGVCSEPDKCQCDFGYVGVN 255
+C+D + + CVC GY + + EC P C G C GV + C C GY G +
Sbjct: 542 KCLDGPNTYTCVCTEGYTGTHCEVDIDECDPDPCHYGSCKDGVATFT--CLCQPGYTGHH 599
Query: 256 CSI---QCQ---CNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPC 309
C +C C C D +CL C T GP C+ +P D+G C+
Sbjct: 600 CETNINECHSQPCRHGGTCQDRDNSYLCL-CLKGTTGPNCEINLDDCASNPCDSGTCLDK 658
Query: 310 SE-Y---CN-GHTGLCINASLASLPFSP-ESGGTSE--LAAFL---DEG---PTTRARCM 355
+ Y C G+TG N ++ SP +GGT E +A F EG PT +
Sbjct: 659 IDGYECACEPGYTGSMCNVNIDECAGSPCHNGGTCEDGIAGFTCRCPEGYHDPTCLSEVN 718
Query: 356 HCG-NHTTGPKCEDCVEG 372
C N C D + G
Sbjct: 719 ECNSNPCIHGACRDGLNG 736
Score = 132 (51.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 47/151 (31%), Positives = 64/151 (42%)
Query: 181 KCPPE-NECLNDHHTCDPQSEQ-CVDLADGFECVCGRGYN----KSEEGGECVPVCSQGC 234
+C + NECL++ CDP+ Q CV + F C C G+ +S G C G
Sbjct: 1263 RCEGDVNECLSN--PCDPRGTQNCVQRVNDFHCECRAGHTGRRCESVINGCRGKPCKNGG 1320
Query: 235 VRGVCSEPDK---CQCDFGYVGVNC--------SIQCQCNGHADCAGPDKLDVCLRCHNH 283
V V S + C+C G+ G C S++C NG +GP + CL C
Sbjct: 1321 VCAVASNTARGFICRCPAGFEGATCENDARTCGSLRC-LNGGTCISGP-RSPTCL-CLGS 1377
Query: 284 TKGPQCD--KCEPLYVGDPRDN-GECVPCSE 311
GP+C P +P N G C P SE
Sbjct: 1378 FTGPECQFPASSPCVGSNPCYNQGTCEPTSE 1408
Score = 130 (50.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 47/141 (33%), Positives = 58/141 (41%)
Query: 188 CLNDHHTCDPQSEQ----CVDLADGFECVCGRGY---NKSEEGGECVPVCSQGCVRG-VC 239
C ++ C P Q C D GF C C GY N SEE EC+ SQ C G C
Sbjct: 1142 CEDEVDECSPNPCQNGATCTDYLGGFSCKCVAGYHGSNCSEEINECL---SQPCQNGGTC 1198
Query: 240 ---SEPDKCQCDFGYVGVNCSIQCQ-CNGHADCAGPDKLDVCLR---CHNHTKGPQCDKC 292
+ KC C G GV+C I C+ D A + C C + G C C
Sbjct: 1199 IDLTNSYKCSCPRGTQGVHCEINVDDCHPPLDPAS--RSPKCFNNGTCVDQVGGYTCT-C 1255
Query: 293 EPLYVGD--PRDNGECV--PC 309
P +VG+ D EC+ PC
Sbjct: 1256 PPGFVGERCEGDVNECLSNPC 1276
Score = 59 (25.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 24/102 (23%), Positives = 38/102 (37%)
Query: 32 IKLKTGSSCPLRCDQ--RTDCQD--CLTSSGG-----EGGWHECRWSSMLNECI-SPSYE 81
+K TG +C + D C CL G E G+ + ++EC SP +
Sbjct: 630 LKGTTGPNCEINLDDCASNPCDSGTCLDKIDGYECACEPGYTGSMCNVNIDECAGSPCHN 689
Query: 82 ALYCAGGVCGLVLGPHQAPQCPRSCSAYTQCST--CLRHAHC 121
C G+ G + P S +C++ C+ H C
Sbjct: 690 GGTCEDGIAGFTCRCPEGYHDPTCLSEVNECNSNPCI-HGAC 730
Score = 58 (25.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 25/95 (26%), Positives = 36/95 (37%)
Query: 36 TGSSCPLRCDQRTD--CQD---CLTSSGG-----EGGWHECRWSSMLNECISPSYEALYC 85
TGS C D+ + CQ+ C GG G+H S +NEC+S +
Sbjct: 1138 TGSYCEDEVDECSPNPCQNGATCTDYLGGFSCKCVAGYHGSNCSEEINECLSQPCQN--- 1194
Query: 86 AGGVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAH 120
GG C + ++ CPR C + H
Sbjct: 1195 -GGTCIDLTNSYKC-SCPRGTQG-VHCEINVDDCH 1226
Score = 47 (21.6 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 29/112 (25%), Positives = 40/112 (35%)
Query: 36 TGSSCPLRCDQ--RTDCQDCLTSSGGEGGWHECRWSSMLNE--CISPSYEALY--CAGGV 89
TGS C + D+ + C + T G G+ CR ++ C+S E C G
Sbjct: 671 TGSMCNVNIDECAGSPCHNGGTCEDGIAGF-TCRCPEGYHDPTCLSEVNECNSNPCIHGA 729
Query: 90 CGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHCGWCA---LQRDTTGGMGVCT 138
C L ++ C S T C C +D T G VCT
Sbjct: 730 CRDGLNGYKC-DCAPGWSG-TNCDINNNECESNPCVNGGTCKDMTSGY-VCT 778
Score = 41 (19.5 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 21/85 (24%), Positives = 32/85 (37%)
Query: 44 CDQRTDCQDCLTSSGGE--GGWHECRWSSMLNECIS-PSYEALYCAGGV----CGLVLGP 96
C+ C + L S + G+ R +NECIS P C + C + G
Sbjct: 423 CEHAGKCLNTLGSFECQCLQGYTGPRCEIDVNECISNPCQNDATCLDQIGEFQCICMPG- 481
Query: 97 HQAPQCPRSCSAYTQCSTCLRHAHC 121
++ C + S CL + HC
Sbjct: 482 YEGVYCEINTDECAS-SPCLHNGHC 505
>UNIPROTKB|J9P153 [details] [associations]
symbol:LTBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186 PROSITE:PS00010
InterPro:IPR009030 SUPFAM:SSF57184 GeneTree:ENSGT00700000104076
Gene3D:3.90.290.10 InterPro:IPR017878 Pfam:PF00683 SUPFAM:SSF57581
PROSITE:PS51364 EMBL:AAEX03005849 EMBL:AAEX03005850
Ensembl:ENSCAFT00000046233 Uniprot:J9P153
Length = 1817
Score = 149 (57.5 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 66/212 (31%), Positives = 81/212 (38%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGG--ECVPV--CSQG--CV 235
C +NECL D C + CV+ + C C GY + G EC V C Q C
Sbjct: 881 CTDDNECLRD--PCAGRGH-CVNRVGSYSCFCYPGYTLATSGTTQECQDVDECEQPEVCS 937
Query: 236 RGVCSEPD---KCQCDFGYVGV---NCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQC 289
G C+ + CQCD GY+ V +C +C C PD RC N C
Sbjct: 938 GGRCTNTEGSYHCQCDQGYIMVRKGHCQDINECRHPGTC--PDG-----RCVNSPGSYTC 990
Query: 290 DKCEPLYVGDPRDNGECVPCSEYCN----GHTGLCINASLASLPFSPESGGT--SELAAF 343
CE Y G +G CV +E H G CIN S S E G T S+
Sbjct: 991 LACEEGYRGQ---SGSCVDVNECLTPGVCAH-GKCINLE-GSFRCSCEQGYTVTSDEKGC 1045
Query: 344 LD-EGPTTRARCMH--CGNHTTGPKCEDCVEG 372
D + +RA C C N C C G
Sbjct: 1046 QDVDECASRASCPTGLCLNTQGSFTCSACESG 1077
Score = 39 (18.8 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 8/22 (36%), Positives = 9/22 (40%)
Query: 110 TQCSTCLRHAHCGWCALQRDTT 131
T C H HC + DTT
Sbjct: 353 TICKQTCAHGHCSNSCERGDTT 374
>UNIPROTKB|G3V511 [details] [associations]
symbol:LTBP2 "Latent-transforming growth factor
beta-binding protein 2" species:9606 "Homo sapiens" [GO:0005509
"calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
PROSITE:PS00010 InterPro:IPR009030 SUPFAM:SSF57184
Gene3D:3.90.290.10 InterPro:IPR017878 Pfam:PF00683 SUPFAM:SSF57581
PROSITE:PS51364 EMBL:AC005479 EMBL:AC013451 HGNC:HGNC:6715
ChiTaRS:LTBP2 Ensembl:ENST00000553939 ArrayExpress:G3V511
Bgee:G3V511 Uniprot:G3V511
Length = 1769
Score = 145 (56.1 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 63/212 (29%), Positives = 82/212 (38%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGG--ECVPV--CSQ-G-CV 235
C +NECL D C + +C++ + C C GY + G EC + C Q G C
Sbjct: 885 CTDDNECLRD--PCKGKG-RCINRVGSYSCFCYPGYTLATSGATQECQDINECEQPGVCS 941
Query: 236 RGVCSEPD---KCQCDFGYVGV---NCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQC 289
G C+ + C+CD GY+ V +C +C C PD RC N C
Sbjct: 942 GGQCTNTEGSYHCECDQGYIMVRKGHCQDINECRHPGTC--PDG-----RCVNSPGSYTC 994
Query: 290 DKCEPLYVGDPRDNGECVPCSEYCN----GHTGLCINASLASLPFSPESGG--TSELAAF 343
CE Y G +G CV +E H G C N S S E G TS+
Sbjct: 995 LACEEGYRGQ---SGSCVDVNECLTPGVCAH-GKCTNLE-GSFRCSCEQGYEVTSDEKGC 1049
Query: 344 LD-EGPTTRARCMH--CGNHTTGPKCEDCVEG 372
D + +RA C C N C C G
Sbjct: 1050 QDVDECASRASCPTGLCLNTEGSFACSACENG 1081
Score = 140 (54.3 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 45/157 (28%), Positives = 65/157 (41%)
Query: 178 NYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CS--QG 233
N C NEC+ + H C P E C++ F C+C G+ +E G C V C+
Sbjct: 1170 NGTVCEDVNECMGEEH-CAPHGE-CLNSHGSFFCLCAPGFVSAEGGTSCQDVDECATTDP 1227
Query: 234 CVRGVCSEPD---KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCD 290
CV G C + C C+ G+ S +C + G D + +C N +C
Sbjct: 1228 CVGGHCVNTEGSFNCLCETGFQPSPESGECVDIDECEDYG-DPVCGTWKCENSPGSYRCV 1286
Query: 291 K-CEPLYVGDPRDNGECVPCSEYCN----GHTGLCIN 322
C+P + P NG+C+ E N G G C N
Sbjct: 1287 LGCQPGFHMAP--NGDCIDIDECANDTMCGSHGFCDN 1321
Score = 43 (20.2 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 16/52 (30%), Positives = 19/52 (36%)
Query: 39 SCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEAL--YCAGG 88
+C L QR Q C S G+ W S +C P EA C G
Sbjct: 682 TCTLPLAQRITKQICCCSRVGKA------WGSECEKCPLPGTEAFREICPAG 727
>WB|WBGene00013416 [details] [associations]
symbol:Y64G10A.7 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR011489 InterPro:IPR018097
Pfam:PF00008 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
InterPro:IPR009030 SUPFAM:SSF57184 InterPro:IPR026823 Pfam:PF12662
Pfam:PF12661 GeneTree:ENSGT00690000101691 EMBL:AL110498
EMBL:AL117206 GeneID:178377 KEGG:cel:CELE_Y64G10A.7 CTD:178377
RefSeq:NP_001255802.1 ProteinModelPortal:G5EFX3 SMR:G5EFX3
EnsemblMetazoa:Y64G10A.7b WormBase:Y64G10A.7b OMA:RIEMEVI
Uniprot:G5EFX3
Length = 1714
Score = 129 (50.5 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 38/116 (32%), Positives = 48/116 (41%)
Query: 210 ECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCA 269
+C C G G+C C G +C +P C GY G +C +C C AD A
Sbjct: 828 KCSCPAGIRCDPVTGDCTKKCPAGYQGNLCDQP----CPAGYFGYDCEQKCSC---ADVA 880
Query: 270 GPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCN-GHTGLCINAS 324
P K VC H H G C C P G P + C P + N HT C+N +
Sbjct: 881 SPHKSKVC---H-HVTGT-CT-CLPGKTG-PLCDQSCAPNTYGPNCAHTCSCVNGA 929
Score = 126 (49.4 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 49/151 (32%), Positives = 59/151 (39%)
Query: 195 CDPQSEQCVDLADGFECVCGRGYNKSEEGGECV-----PVCSQGCV---RGVC-SEPDKC 245
CD D G +C C G++ S+ CV P C+Q C GVC S C
Sbjct: 1363 CDCGENSMCDAISG-KCFCKPGHSGSDCKSGCVQGRFGPDCNQLCSCENGGVCDSSTGSC 1421
Query: 246 QCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDK------CEPLYVGD 299
C GY+G C I CQ +D GP +C C N G CD+ C P + G
Sbjct: 1422 VCPPGYIGTKCEIACQ----SDRFGPTCEKIC-NCEN---GGTCDRLTGQCRCLPGFTG- 1472
Query: 300 PRDNGEC------VPCSEYCNGHTGLCINAS 324
N C C E C G C NAS
Sbjct: 1473 MTCNQVCPEGRFGAGCKEKCRCANGHC-NAS 1502
Score = 122 (48.0 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 51/208 (24%), Positives = 76/208 (36%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFE-CVCGRGYNKSEEGGECVPVCSQGCVRGVCS 240
C C N TCD + QC L GF C + + G C C C G C+
Sbjct: 1445 CEKICNCENGG-TCDRLTGQCRCLP-GFTGMTCNQVCPEGRFGAGCKEKCR--CANGHCN 1500
Query: 241 EPD-KCQCDFGYVG-------------VNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKG 286
+C+C+ G+ G +NC++ C+C G A C D + C C G
Sbjct: 1501 ASSGECKCNLGFTGPSCEQSCPSGKYGLNCTLDCECYGQARC---DPVQGCCDCPPGRYG 1557
Query: 287 PQCD-KCEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLD 345
+C C + G +C+G G C+ P + + +
Sbjct: 1558 SRCQFSCPNGFYGWYCSQSCSCQNGAHCDGADGRCL------CPAGFQGDKCEQKCSEGS 1611
Query: 346 EGPTTRARCMHCGNHTTGPKCEDCVEGK 373
GP +C +CG + KC D +GK
Sbjct: 1612 FGPACSQQC-NCGKY----KC-DATDGK 1633
Score = 119 (46.9 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 61/206 (29%), Positives = 81/206 (39%)
Query: 176 SWNY-VKCPPENECLNDHHTCDPQSEQCVDLADGFECV-CGRGYNKSEEGGECVPVCSQG 233
S +Y KC EC N CDP S C G+ C R K G C C
Sbjct: 1266 SGHYGAKCEETCECENGA-LCDPISGHC-SCQPGWRGKKCNRPCLKGYFGRHCSQSCR-- 1321
Query: 234 CVRGV-CSE-PDKCQCDFGYVGVNCSIQC-------QCNGHADCAGPDKLDVCLRCHNHT 284
C C +CQC GY G +C+ C C+ DC G + + C +
Sbjct: 1322 CANSKSCDHISGRCQCPKGYAGHSCTELCPDGTFGESCSQKCDC-GENSM-----C-DAI 1374
Query: 285 KGPQCDKCEPLYVGDPRDNGECV-----P-CSEYCNGHTGLCINASLASLPFSPESGGTS 338
G +C C+P + G +G CV P C++ C+ G ++S S P GT
Sbjct: 1375 SG-KCF-CKPGHSGSDCKSG-CVQGRFGPDCNQLCSCENGGVCDSSTGSCVCPPGYIGTK 1431
Query: 339 -ELAAFLDE-GPTTRARCMHCGNHTT 362
E+A D GPT C +C N T
Sbjct: 1432 CEIACQSDRFGPTCEKIC-NCENGGT 1456
Score = 63 (27.2 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 31/115 (26%), Positives = 45/115 (39%)
Query: 39 SCP--LRCDQRT-DC-QDCLTSSGGE-------GGW--HECRWSSMLNECISPSYEALYC 85
SCP +RCD T DC + C G G+ ++C + SP +++ C
Sbjct: 830 SCPAGIRCDPVTGDCTKKCPAGYQGNLCDQPCPAGYFGYDCEQKCSCADVASP-HKSKVC 888
Query: 86 --AGGVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCT 138
G C + G P C +SC+ T C C A + D + G CT
Sbjct: 889 HHVTGTCTCLPGK-TGPLCDQSCAPNTYGPNCAHTCSCVNGA-KCDESDGSCHCT 941
Score = 49 (22.3 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 22/97 (22%), Positives = 32/97 (32%)
Query: 27 ANRTNIKLKTGSSCPLRCDQRTDCQDCLTSSGGEGGWH--ECRWSSMLNECISPSYEALY 84
A++ + KL S+ RC+ C D G G +CR C P +
Sbjct: 699 AHKCSCKLCDPSTGSCRCEDPEKCSDGPCPDGFYGSQCNLKCRMDCPNGRC-DPVFGYCT 757
Query: 85 CAGGVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHC 121
C G+ G C + C +T C C
Sbjct: 758 CPDGLYG--------QSCEKPCPHFTFGKNCRFPCKC 786
>UNIPROTKB|E2RS32 [details] [associations]
symbol:LTBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186 PROSITE:PS00010
InterPro:IPR009030 SUPFAM:SSF57184 GeneTree:ENSGT00700000104076
Gene3D:3.90.290.10 InterPro:IPR017878 Pfam:PF00683 SUPFAM:SSF57581
PROSITE:PS51364 OMA:GRDECWC EMBL:AAEX03005849 EMBL:AAEX03005850
Ensembl:ENSCAFT00000026830 Uniprot:E2RS32
Length = 1827
Score = 149 (57.5 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 66/212 (31%), Positives = 81/212 (38%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGG--ECVPV--CSQG--CV 235
C +NECL D C + CV+ + C C GY + G EC V C Q C
Sbjct: 888 CTDDNECLRD--PCAGRGH-CVNRVGSYSCFCYPGYTLATSGTTQECQDVDECEQPEVCS 944
Query: 236 RGVCSEPD---KCQCDFGYVGV---NCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQC 289
G C+ + CQCD GY+ V +C +C C PD RC N C
Sbjct: 945 GGRCTNTEGSYHCQCDQGYIMVRKGHCQDINECRHPGTC--PDG-----RCVNSPGSYTC 997
Query: 290 DKCEPLYVGDPRDNGECVPCSEYCN----GHTGLCINASLASLPFSPESGGT--SELAAF 343
CE Y G +G CV +E H G CIN S S E G T S+
Sbjct: 998 LACEEGYRGQ---SGSCVDVNECLTPGVCAH-GKCINLE-GSFRCSCEQGYTVTSDEKGC 1052
Query: 344 LD-EGPTTRARCMH--CGNHTTGPKCEDCVEG 372
D + +RA C C N C C G
Sbjct: 1053 QDVDECASRASCPTGLCLNTQGSFTCSACESG 1084
Score = 39 (18.8 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 8/22 (36%), Positives = 9/22 (40%)
Query: 110 TQCSTCLRHAHCGWCALQRDTT 131
T C H HC + DTT
Sbjct: 360 TICKQTCAHGHCSNSCERGDTT 381
>UNIPROTKB|G3V3X5 [details] [associations]
symbol:LTBP2 "Latent-transforming growth factor
beta-binding protein 2" species:9606 "Homo sapiens" [GO:0005509
"calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 Pfam:PF07645
PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 PROSITE:PS00010 InterPro:IPR009030 SUPFAM:SSF57184
Gene3D:3.90.290.10 InterPro:IPR017878 Pfam:PF00683 SUPFAM:SSF57581
PROSITE:PS51364 EMBL:AC005479 EMBL:AC013451 HGNC:HGNC:6715
ChiTaRS:LTBP2 Ensembl:ENST00000556690 ArrayExpress:G3V3X5
Bgee:G3V3X5 Uniprot:G3V3X5
Length = 1777
Score = 145 (56.1 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 63/212 (29%), Positives = 82/212 (38%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGG--ECVPV--CSQ-G-CV 235
C +NECL D C + +C++ + C C GY + G EC + C Q G C
Sbjct: 885 CTDDNECLRD--PCKGKG-RCINRVGSYSCFCYPGYTLATSGATQECQDINECEQPGVCS 941
Query: 236 RGVCSEPD---KCQCDFGYVGV---NCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQC 289
G C+ + C+CD GY+ V +C +C C PD RC N C
Sbjct: 942 GGQCTNTEGSYHCECDQGYIMVRKGHCQDINECRHPGTC--PDG-----RCVNSPGSYTC 994
Query: 290 DKCEPLYVGDPRDNGECVPCSEYCN----GHTGLCINASLASLPFSPESGG--TSELAAF 343
CE Y G +G CV +E H G C N S S E G TS+
Sbjct: 995 LACEEGYRGQ---SGSCVDVNECLTPGVCAH-GKCTNLE-GSFRCSCEQGYEVTSDEKGC 1049
Query: 344 LD-EGPTTRARCMH--CGNHTTGPKCEDCVEG 372
D + +RA C C N C C G
Sbjct: 1050 QDVDECASRASCPTGLCLNTEGSFACSACENG 1081
Score = 125 (49.1 bits), Expect = 0.00040, P = 0.00040
Identities = 81/316 (25%), Positives = 108/316 (34%)
Query: 39 SCPL-RCDQRTDCQDCLTSSGGEGGWH-ECRWSSMLNECISPSYEALYCAGGVCGLVLGP 96
+CP RC CL G G C +NEC++P CA G C + G
Sbjct: 979 TCPDGRCVNSPGSYTCLACEEGYRGQSGSC---VDVNECLTPGV----CAHGKCTNLEGS 1031
Query: 97 HQAPQCPRSCSAYTQ---CST---CLRHAHC--GWCALQRDTTGGMGVCTXXXXXXXXXX 148
+ C + + C C A C G C L + + C
Sbjct: 1032 FRC-SCEQGYEVTSDEKGCQDVDECASRASCPTGLC-LNTEGSFACSACENGYWVNEDGT 1089
Query: 149 XXXXTCDILFYQTYPDQVIEVNNNDSFSWN-----YVKCPPENECLNDHHTC-DPQSE-- 200
+ F P V N SFS Y P + C D C DPQS
Sbjct: 1090 ACEDLDECAFPGVCPSGVC-TNTAGSFSCKDCDGGYRPSPLGDSC-EDVDECEDPQSSCL 1147
Query: 201 --QCVDLADGFECVCGRGYNKSEEGGECVPV--C--SQGCV-RGVCSEPDK---CQCDFG 250
+C + ++C+C +G+ + G C V C + C G C C C G
Sbjct: 1148 GGECKNTVGSYQCLCPQGFQLAN-GTVCEDVNECMGEEHCAPHGECLNSHGSFFCLCAPG 1206
Query: 251 YVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCS 310
+V CQ +CA D V C N T+G CE + P ++GECV
Sbjct: 1207 FVSAEGGTSCQ--DVDECATTDPC-VGGHCVN-TEGSFNCLCETGFQPSP-ESGECVDID 1261
Query: 311 EYCN----GHTGLCIN 322
E N G G C N
Sbjct: 1262 ECANDTMCGSHGFCDN 1277
Score = 43 (20.2 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 16/52 (30%), Positives = 19/52 (36%)
Query: 39 SCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEAL--YCAGG 88
+C L QR Q C S G+ W S +C P EA C G
Sbjct: 682 TCTLPLAQRITKQICCCSRVGKA------WGSECEKCPLPGTEAFREICPAG 727
>UNIPROTKB|D4A2G8 [details] [associations]
symbol:Dlk1 "Protein Dlk1" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 Pfam:PF00008 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 RGD:619931
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
PROSITE:PS00010 Pfam:PF12661 IPI:IPI00392573
Ensembl:ENSRNOT00000026522 ArrayExpress:D4A2G8 Uniprot:D4A2G8
Length = 332
Score = 131 (51.2 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 52/155 (33%), Positives = 64/155 (41%)
Query: 195 CDPQSEQCVDLADGFECVCGRGYNKSEEGGECVP-VCSQGCVRGVCSEPDKCQCDFGYVG 253
CDPQ C AD C C G+ EG C V S GCV G+C EP +C C G+ G
Sbjct: 30 CDPQHGFCE--ADNV-CRCEPGW----EGPLCEKCVTSPGCVNGLCEEPWQCVCKEGWDG 82
Query: 254 VNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGP-QCDKCEPLYVGDPRDN--GECVPCS 310
C I + CA C + KG +C C P + G + G CV
Sbjct: 83 KFCEIDIRACTSTPCANNGT------CVDLEKGQYECS-CTPGFSGKDCQHKAGPCVING 135
Query: 311 EYCNGHTGLCIN----ASLASLPFSPE-SGGTSEL 340
C H G C++ AS AS P SG E+
Sbjct: 136 SPCQ-HGGACVDDEGRASHASCLCPPGFSGNFCEI 169
>UNIPROTKB|F1MPE9 [details] [associations]
symbol:NOTCH2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072602 "interleukin-4 secretion" evidence=IEA]
[GO:0060674 "placenta blood vessel development" evidence=IEA]
[GO:0060413 "atrial septum morphogenesis" evidence=IEA] [GO:0046849
"bone remodeling" evidence=IEA] [GO:0046579 "positive regulation of
Ras protein signal transduction" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IEA]
[GO:0016049 "cell growth" evidence=IEA] [GO:0009986 "cell surface"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0007368 "determination of
left/right symmetry" evidence=IEA] [GO:0007050 "cell cycle arrest"
evidence=IEA] [GO:0006959 "humoral immune response" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003184 "pulmonary valve morphogenesis"
evidence=IEA] [GO:0002437 "inflammatory response to antigenic
stimulus" evidence=IEA] [GO:0002011 "morphogenesis of an epithelial
sheet" evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0050793 "regulation of developmental process"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR000742 InterPro:IPR000800 InterPro:IPR001881
InterPro:IPR008297 InterPro:IPR010660 InterPro:IPR011656
InterPro:IPR018097 Pfam:PF00008 Pfam:PF00023 Pfam:PF00066
Pfam:PF06816 Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279
PRINTS:PR01452 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088
PROSITE:PS50258 SMART:SM00004 SMART:SM00179 SMART:SM00181
SMART:SM00248 InterPro:IPR000152 GO:GO:0005634 GO:GO:0008285
GO:GO:0009986 GO:GO:0030154 GO:GO:0005887 GO:GO:0002437
GO:GO:0016049 GO:GO:0046849 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0007219
GO:GO:0005509 GO:GO:0007050 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0043065 GO:GO:0009887 GO:GO:0030326 GO:GO:0007368
PROSITE:PS01186 PROSITE:PS00010 GO:GO:0006959 GO:GO:0050793
GO:GO:0046579 GeneTree:ENSGT00700000104305 GO:GO:0002011
GO:GO:0072602 SUPFAM:SSF90193 KO:K02599 InterPro:IPR024600
Pfam:PF11936 CTD:4853 InterPro:IPR022336 PRINTS:PR01985 OMA:VCMPGFT
EMBL:DAAA02007351 EMBL:DAAA02007352 EMBL:DAAA02007353
IPI:IPI01002388 RefSeq:XP_002686160.2 Ensembl:ENSBTAT00000010400
GeneID:513730 KEGG:bta:513730 Uniprot:F1MPE9
Length = 2471
Score = 142 (55.0 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 63/215 (29%), Positives = 85/215 (39%)
Query: 181 KCPPENE---CLNDHHTCDPQS----EQCVDLADGFECVCGRGYNKS---EEGGECV--P 228
KCP + C N+ C S C+D + F C+C G+ S E EC P
Sbjct: 974 KCPAGFDGVHCENNIDECTESSCFNGGTCIDGINSFSCLCPVGFTGSFCLHEINECNSHP 1033
Query: 229 VCSQG-CVRGVCSEPDKCQCDFGYVGVNCSIQ---CQ---CNGHADCAGPDKLDV-CLRC 280
++G CV G+ + +C C GY G NC C C C DK + CL C
Sbjct: 1034 CLNEGVCVDGLGTY--RCICPLGYTGKNCQTLVNLCSRSPCKNKGTCI-QDKAESRCL-C 1089
Query: 281 HNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSEL 340
+ G CD P + + VP C H+G+CI+A + P S
Sbjct: 1090 PSGWAGAYCDV--PSVSCEVAASHRGVPVDRLCQ-HSGVCISAGNSHHCQCPLGYTGSYC 1146
Query: 341 AAFLDEGPTTRARCMH---CGNHTTGPKCEDCVEG 372
LDE + C H C + G +CE CV G
Sbjct: 1147 EDQLDECSSNP--CQHGATCRDFIGGYRCE-CVPG 1178
Score = 129 (50.5 bits), Expect = 0.00021, P = 0.00021
Identities = 52/204 (25%), Positives = 85/204 (41%)
Query: 186 NECLNDHHTCDPQSEQCVDLADGFECVCGRG-YNKS--EEGGECVPVCSQGCVRGVCS-- 240
+EC ++ C + C++ +GF C+C G ++ S + EC+ S CV G C+
Sbjct: 684 DECASN--PCR-KGATCINDVNGFRCICPEGPHHPSCYSQVNECL---SNPCVHGNCTGG 737
Query: 241 -EPDKCQCDFGYVGVNCSI---QCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLY 296
KC CD G+VG+NC + +C N + D L RC KG + C+ +
Sbjct: 738 LTGYKCLCDAGWVGINCEVDKNECLSNPCQNGGTCDNLVNGYRC-TCKKGFKGYNCQ-VN 795
Query: 297 VGDPRDNGECV---PCSEYCNGHTGLCI---NASLASLPFSPESGGTSELAAFLDEGPTT 350
+ + N C+ C + +G+T C+ +P S E A E P
Sbjct: 796 IDECASN-PCLNQGTCLDDVSGYTCHCVLPYTGKNCQTVLAPCSPNPCENAGVCKEAPNF 854
Query: 351 RARCMHCGNHTTGPKC----EDCV 370
+ C G +C ++CV
Sbjct: 855 ESYSCLCAPGWQGQRCTIDIDECV 878
Score = 49 (22.3 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 19/67 (28%), Positives = 27/67 (40%)
Query: 36 TGSSCPLRCDQ--RTDCQD---CLTSSGG------EGGWHECRWSSMLNECISPSYEALY 84
TG C + D+ C+ C+ G EG H +S + NEC+S
Sbjct: 675 TGQRCNIDIDECASNPCRKGATCINDVNGFRCICPEGPHHPSCYSQV-NECLSNPCVHGN 733
Query: 85 CAGGVCG 91
C GG+ G
Sbjct: 734 CTGGLTG 740
>UNIPROTKB|Q14767 [details] [associations]
symbol:LTBP2 "Latent-transforming growth factor
beta-binding protein 2" species:9606 "Homo sapiens" [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0008201 "heparin binding"
evidence=IEA] [GO:0019838 "growth factor binding" evidence=IEA]
[GO:0070062 "extracellular vesicular exosome" evidence=IDA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=TAS]
[GO:0006605 "protein targeting" evidence=TAS] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=TAS] [GO:0009306 "protein secretion" evidence=TAS]
[GO:0005615 "extracellular space" evidence=IDA] [GO:0031012
"extracellular matrix" evidence=IDA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 Pfam:PF07645
PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179 SMART:SM00181
Reactome:REACT_118779 InterPro:IPR000152 GO:GO:0006605
GO:GO:0005615 GO:GO:0070062 GO:GO:0005578 GO:GO:0008201
GO:GO:0005509 GO:GO:0009306 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0007179 PROSITE:PS01186 PROSITE:PS00010 InterPro:IPR009030
SUPFAM:SSF57184 Orphanet:98976 Gene3D:3.90.290.10
InterPro:IPR017878 Pfam:PF00683 SUPFAM:SSF57581 PROSITE:PS51364
eggNOG:NOG318792 KO:K08023 HOGENOM:HOG000293153 HOVERGEN:HBG052370
CTD:4053 OrthoDB:EOG46Q6RN EMBL:Z37976 EMBL:S82451 EMBL:AC013451
IPI:IPI00292150 PIR:A55494 RefSeq:NP_000419.1 UniGene:Hs.512776
UniGene:Hs.597522 ProteinModelPortal:Q14767 SMR:Q14767
IntAct:Q14767 MINT:MINT-2806977 STRING:Q14767 PhosphoSite:Q14767
DMDM:296439311 PaxDb:Q14767 PRIDE:Q14767 Ensembl:ENST00000261978
GeneID:4053 KEGG:hsa:4053 UCSC:uc001xqa.3 GeneCards:GC14M074965
HGNC:HGNC:6715 HPA:HPA003415 MIM:251750 MIM:602091 MIM:613086
MIM:614819 neXtProt:NX_Q14767 Orphanet:238763 PharmGKB:PA164741922
InParanoid:Q14767 OMA:GRDECWC ChiTaRS:LTBP2 GenomeRNAi:4053
NextBio:15880 ArrayExpress:Q14767 Bgee:Q14767 CleanEx:HS_LTBP2
CleanEx:HS_LTBP3 Genevestigator:Q14767 GermOnline:ENSG00000119681
Uniprot:Q14767
Length = 1821
Score = 145 (56.1 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 63/212 (29%), Positives = 82/212 (38%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGG--ECVPV--CSQ-G-CV 235
C +NECL D C + +C++ + C C GY + G EC + C Q G C
Sbjct: 885 CTDDNECLRD--PCKGKG-RCINRVGSYSCFCYPGYTLATSGATQECQDINECEQPGVCS 941
Query: 236 RGVCSEPD---KCQCDFGYVGV---NCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQC 289
G C+ + C+CD GY+ V +C +C C PD RC N C
Sbjct: 942 GGQCTNTEGSYHCECDQGYIMVRKGHCQDINECRHPGTC--PDG-----RCVNSPGSYTC 994
Query: 290 DKCEPLYVGDPRDNGECVPCSEYCN----GHTGLCINASLASLPFSPESGG--TSELAAF 343
CE Y G +G CV +E H G C N S S E G TS+
Sbjct: 995 LACEEGYRGQ---SGSCVDVNECLTPGVCAH-GKCTNLE-GSFRCSCEQGYEVTSDEKGC 1049
Query: 344 LD-EGPTTRARCMH--CGNHTTGPKCEDCVEG 372
D + +RA C C N C C G
Sbjct: 1050 QDVDECASRASCPTGLCLNTEGSFACSACENG 1081
Score = 140 (54.3 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 45/157 (28%), Positives = 65/157 (41%)
Query: 178 NYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CS--QG 233
N C NEC+ + H C P E C++ F C+C G+ +E G C V C+
Sbjct: 1170 NGTVCEDVNECMGEEH-CAPHGE-CLNSHGSFFCLCAPGFVSAEGGTSCQDVDECATTDP 1227
Query: 234 CVRGVCSEPD---KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCD 290
CV G C + C C+ G+ S +C + G D + +C N +C
Sbjct: 1228 CVGGHCVNTEGSFNCLCETGFQPSPESGECVDIDECEDYG-DPVCGTWKCENSPGSYRCV 1286
Query: 291 K-CEPLYVGDPRDNGECVPCSEYCN----GHTGLCIN 322
C+P + P NG+C+ E N G G C N
Sbjct: 1287 LGCQPGFHMAP--NGDCIDIDECANDTMCGSHGFCDN 1321
Score = 43 (20.2 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 16/52 (30%), Positives = 19/52 (36%)
Query: 39 SCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEAL--YCAGG 88
+C L QR Q C S G+ W S +C P EA C G
Sbjct: 682 TCTLPLAQRITKQICCCSRVGKA------WGSECEKCPLPGTEAFREICPAG 727
>RGD|1563485 [details] [associations]
symbol:Atrnl1 "attractin like 1" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030246 "carbohydrate binding"
evidence=IEA] InterPro:IPR001304 InterPro:IPR002165
InterPro:IPR015915 Pfam:PF01437 PROSITE:PS50041 SMART:SM00034
RGD:1563485 GO:GO:0016021 GO:GO:0030246 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436
Gene3D:2.120.10.80 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 IPI:IPI00563242
Ensembl:ENSRNOT00000023363 ArrayExpress:F1M5M2 Uniprot:F1M5M2
Length = 610
Score = 135 (52.6 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 41/171 (23%), Positives = 62/171 (36%)
Query: 40 CPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQA 99
C C RT C +C TS+G EC W S C+ + + G C L A
Sbjct: 324 CKKPCSLRTSCANC-TSNG-----MECMWCSSTKRCVDSNAYIISFPYGQC---LEWQTA 374
Query: 100 PQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTXXXXXXXXXXXXXXTCDILFY 159
P++CS C CL CGWC +T G G C ++
Sbjct: 375 TCSPQNCSGLRTCGQCLEQPGCGWCNDPSNT--GRGYCIEGSSRGPMKLAGVHNSEVALD 432
Query: 160 QTYPDQVIEVNNNDSFSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFE 210
+ + E N + W++++CP C + C + +C G +
Sbjct: 433 TSLCPK--EKN----YEWSFIQCPACT-CGGHANVCHLHTGKCFCTTKGIK 476
Score = 97 (39.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 42/145 (28%), Positives = 59/145 (40%)
Query: 179 YVKCPPENECLN-DHHTCDPQSEQCVDLADGFECV----CGRGYNKSEEG-GECVPVCSQ 232
Y+ P +CL TC PQ+ C L +C+ CG + S G G C+ S+
Sbjct: 359 YIISFPYGQCLEWQTATCSPQN--CSGLRTCGQCLEQPGCGWCNDPSNTGRGYCIEGSSR 416
Query: 233 GCVR--GVCSEP---DKCQC----DFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNH 283
G ++ GV + D C ++ + + C C C GHA+ C
Sbjct: 417 GPMKLAGVHNSEVALDTSLCPKEKNYEWSFIQCPA-CTCGGHANVCHLHT-GKCFCTTKG 474
Query: 284 TKGPQCDKC--EPLYVGDPRDNGEC 306
KG QC C E YVG+P G C
Sbjct: 475 IKGDQCQLCDSENRYVGNPL-RGTC 498
Score = 72 (30.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 87 GGVCGL-VLGPHQ-APQCPRSCSAYTQCSTCLRHA-HCGWCA 125
G VC V+ P+Q A C + CS T C+ C + C WC+
Sbjct: 307 GLVCEKPVVSPNQNARPCKKPCSLRTSCANCTSNGMECMWCS 348
Score = 71 (30.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 22/87 (25%), Positives = 35/87 (40%)
Query: 43 RCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQAPQC 102
RC + DC C ++ G C+W +CIS S C+ V + Q
Sbjct: 104 RCYRYADCASCTANTNG------CQWCDD-KKCISASSN---CSTSVRNYTKCHIRNEQI 153
Query: 103 PRSCSAYTQCSTCLRHAHCGWCALQRD 129
C+ T C +C + +C W Q++
Sbjct: 154 ---CNKLTSCKSCSLNLNCQWDQRQQE 177
>UNIPROTKB|F1MET4 [details] [associations]
symbol:MEGF10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0055001 "muscle cell development" evidence=IEA]
[GO:0051147 "regulation of muscle cell differentiation"
evidence=IEA] [GO:0048641 "regulation of skeletal muscle tissue
development" evidence=IEA] [GO:0043654 "recognition of apoptotic
cell" evidence=IEA] [GO:0034109 "homotypic cell-cell adhesion"
evidence=IEA] [GO:0014841 "satellite cell proliferation"
evidence=IEA] [GO:0014816 "satellite cell differentiation"
evidence=IEA] [GO:0014719 "satellite cell activation" evidence=IEA]
[GO:0001891 "phagocytic cup" evidence=IEA] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891 GO:GO:0048641
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS50027 GO:GO:0055001 GO:GO:0034109 GO:GO:0014816
Pfam:PF12661 GeneTree:ENSGT00690000101691 GO:GO:0043654
GO:GO:0051147 OMA:FGCNLTC GO:GO:0014719 GO:GO:0014841
EMBL:DAAA02019789 EMBL:DAAA02019790 EMBL:DAAA02019791
EMBL:DAAA02019792 IPI:IPI00742600 UniGene:Bt.64852
Ensembl:ENSBTAT00000000434 NextBio:20877803 ArrayExpress:F1MET4
Uniprot:F1MET4
Length = 1136
Score = 138 (53.6 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 74/296 (25%), Positives = 105/296 (35%)
Query: 42 LRCDQRTDCQ-DCLTSSGGEGGWHECR--WSSML-NECISPSYEALYCAGGVCGLVLGPH 97
+RCD+R C D S G C+ WS + NE SP + Y G C +
Sbjct: 362 IRCDKRCPCHVDNTLSCHPMSGECACKPGWSGLYCNETCSPGF---Y--GEACQQICSCQ 416
Query: 98 QAPQCPRSCSAYTQCSTCLRHAHCGW-CALQRDTTGGMGVCTXXXXXXXXXXXXXXTCDI 156
C S + C+ + C C L +C+ TC+
Sbjct: 417 NGADCD-SVTGKCICAPGFKGIDCSIPCPLGTYGINCSSLCSCKNDAVCSPVDGSCTCNA 475
Query: 157 LFYQTYPDQVIEVNNND-SFSWNYV-KCPPENEC--LNDHHTCDP--QSEQC-VDLADG- 208
++ D I + F N +C C L+ TC P + E+C DG
Sbjct: 476 GWHGV--DCSISCPSGTWGFGCNLTCQCLNGGACNTLDGTCTCAPGWRGEKCEFPCQDGT 533
Query: 209 FECVCGRGYNKSEEGGECVPVCSQ-GCVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHAD 267
+ C + S G C C+ G C G G NCS+ C C A
Sbjct: 534 YGLNCAERCDCSHADG-CHSTTGHCRCLPGWSGVHCDSVCAEGRWGPNCSLPCYCKNGAS 592
Query: 268 CAGPDKLDVCLRCHNHTKGPQCDK-CEPLYVGD--PRDNGECVPCSEYCNGHTGLC 320
C+ PD +C C +G C + C P + G + +CV S C+ TGLC
Sbjct: 593 CS-PDD-GIC-ECAPGFRGTTCQRICSPGFYGHRCSQTCPQCVHSSGPCHHITGLC 645
Score = 134 (52.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 51/177 (28%), Positives = 69/177 (38%)
Query: 213 CGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQ-------CNGH 265
C G+ +S E CVP C+ CV G C P+ CQC+ G+ G NCS C C+
Sbjct: 94 CCPGFYESRE--MCVPHCADKCVHGRCIAPNTCQCEPGWGGTNCSSACDGDHWGPHCSSR 151
Query: 266 ADCAGPDKLD-VCLRCHNHT--KGPQCD-KCEP-LYVGDPRDNGECVPCSEYCNGHTGLC 320
C + + CH +G +C+ +CE Y D +C + C+ TG C
Sbjct: 152 CQCKNGALCNPITGACHCAAGFRGWRCEERCEQGTYGNDCHQRCQCQNGAT-CDHVTGEC 210
Query: 321 INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGN-----HTTGPKCEDCVEG 372
P +L GP RC C N H TG +C C G
Sbjct: 211 ------RCPPGYTGAFCEDLCPPGKHGPQCEQRCP-CQNGGVCHHVTG-ECS-CPPG 258
Score = 113 (44.8 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 34/112 (30%), Positives = 47/112 (41%)
Query: 211 CVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAG 270
C C G S GEC C+ G C++ +C G+ G +C++ CQC ADC
Sbjct: 716 CNCHNGAFCSAYDGECK--CTPGWTGLYCTQ----RCPLGFYGKDCALVCQCQNGADC-- 767
Query: 271 PDKLDVCLRCHNHTKGPQCD-KCEP-LYVGDPRDNGECVPCSEYCNGHTGLC 320
D + C G C+ KC Y R +C+ S C+ TG C
Sbjct: 768 -DHISGQCTCRTGFMGKHCEQKCPAGTYGYGCRQICDCLNNST-CDHITGTC 817
Score = 55 (24.4 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 18/69 (26%), Positives = 24/69 (34%)
Query: 73 NEC-ISPSYEALYCAGGVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHC-----GWCAL 126
N C P + C+ G GPH + +C C C+ HC GW
Sbjct: 122 NTCQCEPGWGGTNCSSACDGDHWGPHCSSRC--QCKNGALCNPITGACHCAAGFRGWRCE 179
Query: 127 QRDTTGGMG 135
+R G G
Sbjct: 180 ERCEQGTYG 188
>UNIPROTKB|Q9TV36 [details] [associations]
symbol:FBN1 "Fibrillin-1" species:9823 "Sus scrofa"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR011398
InterPro:IPR018097 Pfam:PF07645 PIRSF:PIRSF036312 PROSITE:PS01187
PROSITE:PS50026 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005578 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 eggNOG:NOG12793 PROSITE:PS00010 InterPro:IPR009030
SUPFAM:SSF57184 InterPro:IPR026823 Pfam:PF12662 GO:GO:0005201
CTD:2200 HOGENOM:HOG000231768 HOVERGEN:HBG005643 KO:K06825
Gene3D:3.90.290.10 InterPro:IPR017878 PANTHER:PTHR24039:SF0
Pfam:PF00683 SUPFAM:SSF57581 PROSITE:PS51364 OrthoDB:EOG45TCM7
EMBL:AF073800 RefSeq:NP_001001771.1 UniGene:Ssc.53950
ProteinModelPortal:Q9TV36 SMR:Q9TV36 STRING:Q9TV36 GeneID:414836
KEGG:ssc:414836 Uniprot:Q9TV36
Length = 2871
Score = 142 (55.0 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 57/207 (27%), Positives = 83/207 (40%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG---CVR 236
C +EC ++ + CD QC ++ + C+C G+ SE+ CV V C C+
Sbjct: 1236 CTDIDECEDNPNICD--GGQCTNIPGEYRCLCYDGFMASEDMKTCVDVNECDLNPNICLS 1293
Query: 237 GVCSEPDK---CQCDFGYVG----VNCSI--QCQCNGHADCAGPDKLDVCLRCHNHTKGP 287
G C C CD GY G C+ +C+ H +C D+ VC +T G
Sbjct: 1294 GTCENTKGSFICHCDMGYSGKKGKTGCTDINECEIGAH-NC---DRHAVC----TNTAGS 1345
Query: 288 QCDKCEPLYVGDP---RDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSE--LAA 342
C P ++GD D EC + C+ H C N ++ S + G T + A
Sbjct: 1346 FNCSCSPGWIGDGIKCTDLDECSNGTHMCSQHAD-CKN-TMGSYRCLCKEGYTGDGFTCA 1403
Query: 343 FLDEGPTTRARC--MHCGNHTTGPKCE 367
LDE C + C G CE
Sbjct: 1404 DLDECSENVKLCGNVQCLYAPGGYHCE 1430
Score = 129 (50.5 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 57/205 (27%), Positives = 79/205 (38%)
Query: 186 NECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG---CVRGVCS 240
+EC H C ++ +C++ + C+C GY G CV + C+Q C +C
Sbjct: 2404 DECKVIHDVC--RNGECINDRGSYHCICKTGYTPDITGTACVDLNECNQAPKPC-NFICK 2460
Query: 241 EPD---KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVC-LRCHNHTKGPQCDKCEPLY 296
+ +C C GY+ C+ +CA K C C N T G KC P +
Sbjct: 2461 NTEGSYQCSCPKGYILQEDGRSCK--DLDECA--TKQHNCQFLCVN-TIGSFACKCPPGF 2515
Query: 297 VGDPR---DNGECVPCSEYCNGHTGLCINA--SLA---SLPFSPESGGTSELAAFLDEGP 348
DN EC C G G+C N S FS + G S +DE
Sbjct: 2516 TQHHTACIDNNECTSDINLC-GAKGICQNTPGSFTCECQRGFSLDQSGAS--CEDVDECE 2572
Query: 349 TTRARCMH-CGNHTTGPKCEDCVEG 372
RC H C N G +C C +G
Sbjct: 2573 GNH-RCQHGCQNIIGGYRCS-CPQG 2595
Score = 127 (49.8 bits), Expect = 0.00040, P = 0.00040
Identities = 43/160 (26%), Positives = 67/160 (41%)
Query: 180 VKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG---C 234
+KC +EC N H C Q C + + C+C GY + +G C + CS+ C
Sbjct: 1359 IKCTDLDECSNGTHMCS-QHADCKNTMGSYRCLCKEGY--TGDGFTCADLDECSENVKLC 1415
Query: 235 VRGVCS-EPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCL--RCHNHTKGPQCDK 291
C P C++ V + + C +C+ P+ +C+ CHN +C+
Sbjct: 1416 GNVQCLYAPGGYHCEYDMGFVPSADRKSCVDSDECSLPN---ICVFGTCHNLPGLFRCE- 1471
Query: 292 CEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFS 331
CE Y D R G C +E T CI+ + + P S
Sbjct: 1472 CEIGYELD-RSGGNCTDVNECLEPPT--CISGNCVNTPGS 1508
Score = 119 (46.9 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 41/155 (26%), Positives = 61/155 (39%)
Query: 181 KCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQ-GCVRG 237
+C NEC + C QC+D F C+C G+ + + C+ + C + C G
Sbjct: 1846 QCNDRNECQEIPNICS--HGQCIDTVGSFYCLCHTGFKTNADQTMCLDINECERDACGNG 1903
Query: 238 VCSEPD---KCQCDFGYVGVNCSIQCQCNGHADCA-GPDKLDVCLRCHNHTKGPQCDKCE 293
C C+C+ G++ S C +CA G L +C N QC +C
Sbjct: 1904 TCRNTIGSFNCRCNHGFI---LSHNNDCIDVDECATGNGNLCRNGQCINTVGSFQC-QCN 1959
Query: 294 PLYVGDPRDNGECVPCSEYCNGHTGLCINASLASL 328
Y P D CV +E C G C + +L
Sbjct: 1960 EGYEVAP-DGRTCVDINE-CLLEPGKCAPGTCQNL 1992
Score = 56 (24.8 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 24/83 (28%), Positives = 33/83 (39%)
Query: 44 CDQRTDCQD------CLTSSGGEGGWHECRWSSMLNEC-----ISPSYEALYCAGGV-CG 91
C Q DC++ CL G G C + L+EC + + + LY GG C
Sbjct: 1374 CSQHADCKNTMGSYRCLCKEGYTGDGFTC---ADLDECSENVKLCGNVQCLYAPGGYHCE 1430
Query: 92 LVLGPHQAPQCPR-SCSAYTQCS 113
+G P R SC +CS
Sbjct: 1431 YDMG--FVPSADRKSCVDSDECS 1451
Score = 47 (21.6 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 20/87 (22%), Positives = 29/87 (33%)
Query: 37 GSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEAL--YCAGGVCGLVL 94
G C + Q+C + GEG W C + EA C G G+++
Sbjct: 2067 GGKCSSPKSRNHSKQECCCALKGEG------WGDPCELCPTEPDEAFRQICPYG-SGIIV 2119
Query: 95 GPHQAPQCPRSCSAYTQCSTCLRHAHC 121
GP + C C +H C
Sbjct: 2120 GPDDSAVDMDECKEPDVC----KHGQC 2142
Score = 45 (20.9 bits), Expect = 0.00077, Sum P(2) = 0.00076
Identities = 20/75 (26%), Positives = 27/75 (36%)
Query: 40 CPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQA 99
CP R D + C E G H+C M EC + +Y +CG G +
Sbjct: 2232 CPTGYVLREDRRMCKDEDECEEGKHDCAEKQM--EC--KNLIGMYIC--ICGP--GYQRR 2283
Query: 100 PQCPRSCSAYTQCST 114
P C +C T
Sbjct: 2284 PD-GEGCVDENECQT 2297
>RGD|620326 [details] [associations]
symbol:Pcsk5 "proprotein convertase subtilisin/kexin type 5"
species:10116 "Rattus norvegicus" [GO:0001822 "kidney development"
evidence=IEA;ISO] [GO:0002001 "renin secretion into blood stream"
evidence=IEA;ISO] [GO:0004175 "endopeptidase activity"
evidence=ISO] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA;ISO;IBA] [GO:0005615 "extracellular space"
evidence=ISO;IBA] [GO:0005794 "Golgi apparatus" evidence=ISO;IBA]
[GO:0006465 "signal peptide processing" evidence=IEA;ISO]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0007507 "heart
development" evidence=IEA;ISO] [GO:0007566 "embryo implantation"
evidence=IEA;ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA;ISO] [GO:0012505 "endomembrane system"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016485 "protein processing" evidence=ISO] [GO:0016486 "peptide
hormone processing" evidence=IEA;ISO] [GO:0019067 "viral assembly,
maturation, egress, and release" evidence=IEA;ISO] [GO:0030141
"secretory granule" evidence=IEA;ISO] [GO:0030323 "respiratory tube
development" evidence=IEA;ISO] [GO:0035108 "limb morphogenesis"
evidence=IEA;ISO] [GO:0042089 "cytokine biosynthetic process"
evidence=IEA;ISO] [GO:0042277 "peptide binding" evidence=IEA;ISO]
[GO:0043043 "peptide biosynthetic process" evidence=IEA;ISO]
[GO:0048566 "embryonic digestive tract development"
evidence=IEA;ISO] [GO:0048706 "embryonic skeletal system
development" evidence=IEA;ISO] InterPro:IPR000209
InterPro:IPR000742 InterPro:IPR002884 Pfam:PF00082 Pfam:PF01483
SMART:SM00181 Prosite:PS00137 Prosite:PS00138 RGD:620326
GO:GO:0016021 GO:GO:0005794 GO:GO:0005615 GO:GO:0007565
GO:GO:0006508 GO:GO:0012505 GO:GO:0004252 InterPro:IPR008979
SUPFAM:SSF49785 Gene3D:3.40.50.200 InterPro:IPR022398
InterPro:IPR023828 InterPro:IPR015500 InterPro:IPR009020
PANTHER:PTHR10795 PRINTS:PR00723 SUPFAM:SSF52743 SUPFAM:SSF54897
PROSITE:PS00136 InterPro:IPR023827 eggNOG:COG4935
HOGENOM:HOG000192536 InterPro:IPR006212 InterPro:IPR009030
SMART:SM00261 SUPFAM:SSF57184 GeneTree:ENSGT00600000084064
HOVERGEN:HBG008705 MEROPS:S08.076 CTD:5125 KO:K08654
OrthoDB:EOG4CVG61 EMBL:L14933 EMBL:U47014 IPI:IPI00958093
PIR:B48225 RefSeq:XP_342033.4 UniGene:Rn.104002 STRING:P41413
PRIDE:P41413 Ensembl:ENSRNOT00000016164 GeneID:116548
KEGG:rno:116548 UCSC:RGD:620326 NextBio:619169 ArrayExpress:P41413
Genevestigator:P41413 GermOnline:ENSRNOG00000012036 Uniprot:P41413
Length = 1809
Score = 140 (54.3 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 49/171 (28%), Positives = 68/171 (39%)
Query: 176 SWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECV-CGRGYNKSEEGGECVPVCSQGC 234
SW + + +C HHTC + C C C G + E GEC+P C +GC
Sbjct: 925 SWKFEL---KKQCHPCHHTC----QGCQGSGPS-NCTSCKAGEFQDSEYGECMP-CEEGC 975
Query: 235 VRGVCSEPDKC-QCDFGYVGV--NCSIQC---------QCNG-HADCAGPDKLDVCLRCH 281
V +P C C GY +C C +C +C D+ + C C
Sbjct: 976 VGCTVDDPGACTSCATGYYMFERHCYKACPEKTFGEKWECKACGTNCGSCDQHE-CYWCE 1034
Query: 282 NH---TKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLP 329
+ G C+P + GD ++ GEC PC C TGL N +S P
Sbjct: 1035 EGFFLSSGSCVQDCDPGFYGD-QELGECKPCHRACETCTGLGYN-QCSSCP 1083
Score = 109 (43.4 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 55/216 (25%), Positives = 75/216 (34%)
Query: 181 KCPPENECLNDHHTCD-PQSEQCVDLADGF-----ECV--CGRGYNKSEEGGECVPVCSQ 232
+C P C + TC+ P S QC+ G+ EC+ C GY G C C +
Sbjct: 1473 QCVP---CHSSCRTCEGPHSMQCLSCRPGWFQLGKECLLQCRDGYYGESTSGRCEK-CDK 1528
Query: 233 GCVRGVCSEPDKCQ-CDFGYVGVNCSIQCQ--CNGHADCAGPDKLDVCLRCHNHTKGPQC 289
C +P CQ CD + + QC C H C RCH P C
Sbjct: 1529 SCKTCRGPQPTDCQSCDTFFFLLRSKGQCHLACPEHY--YADQHAQTCERCH-----PTC 1581
Query: 290 DKCEPLYVGDPRD--------NGECVP-C--SEYCNGHTGLCINASLASLPFSPESGGTS 338
DKC + G C P C EY +G G N G S
Sbjct: 1582 DKCSGKEAWNCLSCVWSYHLLKGICTPECIVGEYRDGK-GENFNCKKCHESCMECKGPGS 1640
Query: 339 ELAAFLDEGPTTR---ARCMHCGNHTTGPKCEDCVE 371
+ G + +RC+ C N + + +DC +
Sbjct: 1641 KNCTGCSAGLLLQMDDSRCLRCCNASHPHRSQDCCD 1676
Score = 107 (42.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 53/198 (26%), Positives = 80/198 (40%)
Query: 186 NECLNDHHTCDPQSEQCVDLADGFEC-VCGRGYNKSEEGGECVPVCSQG--CVRGVCSEP 242
+EC + D +++C D + C +C + C+ C +G V+ VC+ P
Sbjct: 1361 DECPKGTYK-DEVNDECRDCPES--CLICSSAWT-------CL-TCREGFTVVQDVCTAP 1409
Query: 243 DKCQC-DFGYVGVNCSIQCQ-CNGHAD-CAGPDKLDVCLRCHNHT--KGPQCDK-CEPLY 296
+C ++ VG S +CQ C+ C+GP + + C C T C K C Y
Sbjct: 1410 KECAAIEYWDVG---SHRCQPCHRKCSRCSGPSE-NQCYTCPRETFLLNTTCVKECPEGY 1465
Query: 297 VGDPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDE--GPTTRARC 354
D +D+ +CVPC C G L+ P + G L D G +T RC
Sbjct: 1466 HTD-KDSHQCVPCHSSCRTCEGPHSMQCLSCRPGWFQLGKECLLQC-RDGYYGESTSGRC 1523
Query: 355 MHCGNHTT---GPKCEDC 369
C GP+ DC
Sbjct: 1524 EKCDKSCKTCRGPQPTDC 1541
Score = 72 (30.4 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 28/97 (28%), Positives = 39/97 (40%)
Query: 39 SCPLRC-DQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCG-LVLGP 96
+CP + ++ +C+ C T+ G HEC W +S C G G LG
Sbjct: 1003 ACPEKTFGEKWECKACGTNCGS-CDQHECYWCEE-GFFLSSGSCVQDCDPGFYGDQELG- 1059
Query: 97 HQAPQCPRSCSA-----YTQCSTC-----LRHAHCGW 123
+ C R+C Y QCS+C L H C W
Sbjct: 1060 -ECKPCHRACETCTGLGYNQCSSCPEGLQLWHGTCIW 1095
>UNIPROTKB|P41413 [details] [associations]
symbol:Pcsk5 "Proprotein convertase subtilisin/kexin type
5" species:10116 "Rattus norvegicus" [GO:0006508 "proteolysis"
evidence=IEA] InterPro:IPR000209 InterPro:IPR000742
InterPro:IPR002884 Pfam:PF00082 Pfam:PF01483 SMART:SM00181
Prosite:PS00137 Prosite:PS00138 RGD:620326 GO:GO:0016021
GO:GO:0005794 GO:GO:0005615 GO:GO:0007565 GO:GO:0006508
GO:GO:0012505 GO:GO:0004252 InterPro:IPR008979 SUPFAM:SSF49785
Gene3D:3.40.50.200 InterPro:IPR022398 InterPro:IPR023828
InterPro:IPR015500 InterPro:IPR009020 PANTHER:PTHR10795
PRINTS:PR00723 SUPFAM:SSF52743 SUPFAM:SSF54897 PROSITE:PS00136
InterPro:IPR023827 eggNOG:COG4935 HOGENOM:HOG000192536
InterPro:IPR006212 InterPro:IPR009030 SMART:SM00261 SUPFAM:SSF57184
GeneTree:ENSGT00600000084064 HOVERGEN:HBG008705 MEROPS:S08.076
CTD:5125 KO:K08654 OrthoDB:EOG4CVG61 EMBL:L14933 EMBL:U47014
IPI:IPI00958093 PIR:B48225 RefSeq:XP_342033.4 UniGene:Rn.104002
STRING:P41413 PRIDE:P41413 Ensembl:ENSRNOT00000016164 GeneID:116548
KEGG:rno:116548 UCSC:RGD:620326 NextBio:619169 ArrayExpress:P41413
Genevestigator:P41413 GermOnline:ENSRNOG00000012036 Uniprot:P41413
Length = 1809
Score = 140 (54.3 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 49/171 (28%), Positives = 68/171 (39%)
Query: 176 SWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECV-CGRGYNKSEEGGECVPVCSQGC 234
SW + + +C HHTC + C C C G + E GEC+P C +GC
Sbjct: 925 SWKFEL---KKQCHPCHHTC----QGCQGSGPS-NCTSCKAGEFQDSEYGECMP-CEEGC 975
Query: 235 VRGVCSEPDKC-QCDFGYVGV--NCSIQC---------QCNG-HADCAGPDKLDVCLRCH 281
V +P C C GY +C C +C +C D+ + C C
Sbjct: 976 VGCTVDDPGACTSCATGYYMFERHCYKACPEKTFGEKWECKACGTNCGSCDQHE-CYWCE 1034
Query: 282 NH---TKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLP 329
+ G C+P + GD ++ GEC PC C TGL N +S P
Sbjct: 1035 EGFFLSSGSCVQDCDPGFYGD-QELGECKPCHRACETCTGLGYN-QCSSCP 1083
Score = 109 (43.4 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 55/216 (25%), Positives = 75/216 (34%)
Query: 181 KCPPENECLNDHHTCD-PQSEQCVDLADGF-----ECV--CGRGYNKSEEGGECVPVCSQ 232
+C P C + TC+ P S QC+ G+ EC+ C GY G C C +
Sbjct: 1473 QCVP---CHSSCRTCEGPHSMQCLSCRPGWFQLGKECLLQCRDGYYGESTSGRCEK-CDK 1528
Query: 233 GCVRGVCSEPDKCQ-CDFGYVGVNCSIQCQ--CNGHADCAGPDKLDVCLRCHNHTKGPQC 289
C +P CQ CD + + QC C H C RCH P C
Sbjct: 1529 SCKTCRGPQPTDCQSCDTFFFLLRSKGQCHLACPEHY--YADQHAQTCERCH-----PTC 1581
Query: 290 DKCEPLYVGDPRD--------NGECVP-C--SEYCNGHTGLCINASLASLPFSPESGGTS 338
DKC + G C P C EY +G G N G S
Sbjct: 1582 DKCSGKEAWNCLSCVWSYHLLKGICTPECIVGEYRDGK-GENFNCKKCHESCMECKGPGS 1640
Query: 339 ELAAFLDEGPTTR---ARCMHCGNHTTGPKCEDCVE 371
+ G + +RC+ C N + + +DC +
Sbjct: 1641 KNCTGCSAGLLLQMDDSRCLRCCNASHPHRSQDCCD 1676
Score = 107 (42.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 53/198 (26%), Positives = 80/198 (40%)
Query: 186 NECLNDHHTCDPQSEQCVDLADGFEC-VCGRGYNKSEEGGECVPVCSQG--CVRGVCSEP 242
+EC + D +++C D + C +C + C+ C +G V+ VC+ P
Sbjct: 1361 DECPKGTYK-DEVNDECRDCPES--CLICSSAWT-------CL-TCREGFTVVQDVCTAP 1409
Query: 243 DKCQC-DFGYVGVNCSIQCQ-CNGHAD-CAGPDKLDVCLRCHNHT--KGPQCDK-CEPLY 296
+C ++ VG S +CQ C+ C+GP + + C C T C K C Y
Sbjct: 1410 KECAAIEYWDVG---SHRCQPCHRKCSRCSGPSE-NQCYTCPRETFLLNTTCVKECPEGY 1465
Query: 297 VGDPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDE--GPTTRARC 354
D +D+ +CVPC C G L+ P + G L D G +T RC
Sbjct: 1466 HTD-KDSHQCVPCHSSCRTCEGPHSMQCLSCRPGWFQLGKECLLQC-RDGYYGESTSGRC 1523
Query: 355 MHCGNHTT---GPKCEDC 369
C GP+ DC
Sbjct: 1524 EKCDKSCKTCRGPQPTDC 1541
Score = 72 (30.4 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 28/97 (28%), Positives = 39/97 (40%)
Query: 39 SCPLRC-DQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCG-LVLGP 96
+CP + ++ +C+ C T+ G HEC W +S C G G LG
Sbjct: 1003 ACPEKTFGEKWECKACGTNCGS-CDQHECYWCEE-GFFLSSGSCVQDCDPGFYGDQELG- 1059
Query: 97 HQAPQCPRSCSA-----YTQCSTC-----LRHAHCGW 123
+ C R+C Y QCS+C L H C W
Sbjct: 1060 -ECKPCHRACETCTGLGYNQCSSCPEGLQLWHGTCIW 1095
>UNIPROTKB|Q13751 [details] [associations]
symbol:LAMB3 "Laminin subunit beta-3" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005610
"laminin-5 complex" evidence=IEA] [GO:0050873 "brown fat cell
differentiation" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=NAS] [GO:0008544 "epidermis development" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0031581
"hemidesmosome assembly" evidence=TAS] [GO:0034329 "cell junction
assembly" evidence=TAS] Reactome:REACT_118779
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111102 GO:GO:0005576 EMBL:CH471100 GO:GO:0005198
GO:GO:0050873 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Reactome:REACT_111155 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0008544
GO:GO:0031581 MIM:226650 Orphanet:79402 EMBL:AL031316
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
EMBL:AL023754 MIM:226700 Orphanet:79404 GO:GO:0005610 EMBL:L25541
EMBL:U17760 EMBL:U17745 EMBL:U17746 EMBL:U17747 EMBL:U17748
EMBL:U17749 EMBL:U17750 EMBL:U17751 EMBL:U17752 EMBL:U17753
EMBL:U17754 EMBL:U17755 EMBL:U17756 EMBL:U17757 EMBL:U17758
EMBL:U17759 EMBL:D37766 EMBL:AY035783 EMBL:BC075838 IPI:IPI00299404
PIR:A53612 RefSeq:NP_000219.2 RefSeq:NP_001017402.1
RefSeq:NP_001121113.1 UniGene:Hs.497636 ProteinModelPortal:Q13751
SMR:Q13751 MINT:MINT-4053402 STRING:Q13751 PhosphoSite:Q13751
DMDM:2497600 PaxDb:Q13751 PRIDE:Q13751 DNASU:3914
Ensembl:ENST00000356082 Ensembl:ENST00000367030
Ensembl:ENST00000391911 Ensembl:ENST00000455193 GeneID:3914
KEGG:hsa:3914 UCSC:uc001hhg.3 CTD:3914 GeneCards:GC01M209788
HGNC:HGNC:6490 HPA:HPA008069 MIM:150310 neXtProt:NX_Q13751
PharmGKB:PA30278 eggNOG:NOG289025 HOGENOM:HOG000113279
HOVERGEN:HBG052302 InParanoid:Q13751 KO:K06244 OMA:RSQMEED
OrthoDB:EOG4JDH5Z PhylomeDB:Q13751 ChiTaRS:LAMB3 GenomeRNAi:3914
NextBio:15375 PMAP-CutDB:Q13751 ArrayExpress:Q13751 Bgee:Q13751
CleanEx:HS_LAMB3 Genevestigator:Q13751 GermOnline:ENSG00000196878
Uniprot:Q13751
Length = 1172
Score = 138 (53.6 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 44/128 (34%), Positives = 56/128 (43%)
Query: 260 CQCNGHAD-CA-------GPDKL----DVCLRCHNHTKGPQCDKCEPLYVGDP------R 301
C C+GHAD CA GP DVC+ C ++T GP C++C P Y P +
Sbjct: 250 CFCHGHADRCAPKPGASAGPSTAVQVHDVCV-CQHNTAGPNCERCAPFYNNRPWRPAEGQ 308
Query: 302 DNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHT 361
D EC C CNGH+ C F P S+ A+ G C +C +HT
Sbjct: 309 DAHECQRCD--CNGHSETC--------HFDPAVFAASQ-GAY---GGV----CDNCRDHT 350
Query: 362 TGPKCEDC 369
G CE C
Sbjct: 351 EGKNCERC 358
Score = 128 (50.1 bits), Expect = 0.00012, P = 0.00012
Identities = 62/207 (29%), Positives = 79/207 (38%)
Query: 195 CDPQSE----QCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKC-QCDF 249
CDP C D G +CVC K GE +C G + P C +CD
Sbjct: 381 CDPDGAVPGAPC-DPVTG-QCVC-----KEHVQGERCDLCKPGFTGLTYANPQGCHRCDC 433
Query: 250 GYVGVNCSIQC-QCNGHADC----AGPDKLDVCLRCH-NHTKGPQCDKC--EPLYVGDPR 301
+G + C + +G C GP K D C H G C+ C +P P+
Sbjct: 434 NILGSRRDMPCDEESGRCLCLPNVVGP-KCDQCAPYHWKLASGQGCEPCACDPHNSLSPQ 492
Query: 302 DN---GECVPCSEYCNGHTGL-CINASLASLPFSPESG-GTSELAAFLD----EGP---T 349
N G+C PC E G GL C A++ P T A D EGP
Sbjct: 493 CNQFTGQC-PCRE---GFGGLMCSAAAIRQCPDRTYGDVATGCRACDCDFRGTEGPGCDK 548
Query: 350 TRARCMHCGNHTTGPKCEDCVEGKENR 376
RC+ C TGP+C+ C G NR
Sbjct: 549 ASGRCL-CRPGLTGPRCDQCQRGYCNR 574
>UNIPROTKB|C9JD84 [details] [associations]
symbol:LTBP1 "Latent-transforming growth factor
beta-binding protein 1" species:9606 "Homo sapiens" [GO:0005509
"calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
PROSITE:PS00010 Gene3D:3.90.290.10 InterPro:IPR017878 Pfam:PF00683
SUPFAM:SSF57581 PROSITE:PS51364 EMBL:AC020594 EMBL:AC019195
EMBL:AC019127 HGNC:HGNC:6714 ChiTaRS:LTBP1 HOGENOM:HOG000293153
EMBL:AL133244 IPI:IPI00893975 ProteinModelPortal:C9JD84 SMR:C9JD84
STRING:C9JD84 PRIDE:C9JD84 Ensembl:ENST00000402934
ArrayExpress:C9JD84 Bgee:C9JD84 Uniprot:C9JD84
Length = 1340
Score = 140 (54.3 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 56/205 (27%), Positives = 81/205 (39%)
Query: 175 FSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGC 234
FS KC +EC H C +C + F C+C G+ SEEG C+ V C
Sbjct: 527 FSEQQRKCVDIDECTQVQHLCS--QGRCENTEGSFLCICPAGFMASEEGTNCIDV--DEC 582
Query: 235 VR-GVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGP-DKLDVCLRCHNHTKGPQCDKC 292
+R VC E C G C C G + +D CL N + P ++C
Sbjct: 583 LRPDVCGE-GHCVNTVG--AFRCEY-CDSGYRMTQRGRCEDIDECL---NPSTCPD-EQC 634
Query: 293 EPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSEL-AAFL---DEGP 348
V P + +CVPC+E G G C++ P +G S L +++ +G
Sbjct: 635 ----VNSP-GSYQCVPCTEGFRGWNGQCLDVDECLEPNVCANGDCSNLEGSYMCSCHKGY 689
Query: 349 TTRARCMHCGNHTTGPKCEDCVEGK 373
T HC + + CV G+
Sbjct: 690 TRTPDHKHCRDIDECQQGNLCVNGQ 714
Score = 122 (48.0 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 45/155 (29%), Positives = 57/155 (36%)
Query: 179 YVKCPPENECLNDHHTCDPQS----EQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQ 232
Y + P C D C + QC + F C CG+GY S +C + C
Sbjct: 689 YTRTPDHKHC-RDIDECQQGNLCVNGQCKNTEGSFRCTCGQGYQLSAAKDQCEDIDECQH 747
Query: 233 G--CVRGVCSEPD---KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLR--CHNHTK 285
C G C + +C CD GY C+ +C DK VC R C N
Sbjct: 748 RHLCAHGQCRNTEGSFQCVCDQGYRASGLGDHCEDIN--ECL-EDK-SVCQRGDCINTAG 803
Query: 286 GPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLC 320
C C + D DN C +E C H GLC
Sbjct: 804 SYDCT-CPDGFQLD--DNKTCQDINE-CE-HPGLC 833
Score = 45 (20.9 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 14/55 (25%), Positives = 23/55 (41%)
Query: 13 QVAYTLEPRTVKTDANRTNIKLKTGSSCPLRCDQRTDCQDCLTSSGGEGGWHECR 67
QV + P KT R + GS C + +DC + G G+++C+
Sbjct: 216 QVIPHVYPVAAKTQLGRC-FQETIGSQCGKALPGLSKQEDCCGTVGTSWGFNKCQ 269
>UNIPROTKB|E7EV71 [details] [associations]
symbol:LTBP1 "Latent-transforming growth factor
beta-binding protein 1" species:9606 "Homo sapiens" [GO:0005509
"calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
PROSITE:PS00010 Gene3D:3.90.290.10 InterPro:IPR017878 Pfam:PF00683
SUPFAM:SSF57581 PROSITE:PS51364 EMBL:AC020594 EMBL:AC019195
EMBL:AC019127 HGNC:HGNC:6714 ChiTaRS:LTBP1 EMBL:AL133244
IPI:IPI00929158 ProteinModelPortal:E7EV71 SMR:E7EV71 PRIDE:E7EV71
Ensembl:ENST00000418533 ArrayExpress:E7EV71 Bgee:E7EV71
Uniprot:E7EV71
Length = 1353
Score = 140 (54.3 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 56/205 (27%), Positives = 81/205 (39%)
Query: 175 FSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGC 234
FS KC +EC H C +C + F C+C G+ SEEG C+ V C
Sbjct: 580 FSEQQRKCVDIDECTQVQHLCS--QGRCENTEGSFLCICPAGFMASEEGTNCIDV--DEC 635
Query: 235 VR-GVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGP-DKLDVCLRCHNHTKGPQCDKC 292
+R VC E C G C C G + +D CL N + P ++C
Sbjct: 636 LRPDVCGE-GHCVNTVG--AFRCEY-CDSGYRMTQRGRCEDIDECL---NPSTCPD-EQC 687
Query: 293 EPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSEL-AAFL---DEGP 348
V P + +CVPC+E G G C++ P +G S L +++ +G
Sbjct: 688 ----VNSP-GSYQCVPCTEGFRGWNGQCLDVDECLEPNVCANGDCSNLEGSYMCSCHKGY 742
Query: 349 TTRARCMHCGNHTTGPKCEDCVEGK 373
T HC + + CV G+
Sbjct: 743 TRTPDHKHCRDIDECQQGNLCVNGQ 767
Score = 122 (48.0 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 45/155 (29%), Positives = 57/155 (36%)
Query: 179 YVKCPPENECLNDHHTCDPQS----EQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQ 232
Y + P C D C + QC + F C CG+GY S +C + C
Sbjct: 742 YTRTPDHKHC-RDIDECQQGNLCVNGQCKNTEGSFRCTCGQGYQLSAAKDQCEDIDECQH 800
Query: 233 G--CVRGVCSEPD---KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLR--CHNHTK 285
C G C + +C CD GY C+ +C DK VC R C N
Sbjct: 801 RHLCAHGQCRNTEGSFQCVCDQGYRASGLGDHCEDIN--ECL-EDK-SVCQRGDCINTAG 856
Query: 286 GPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLC 320
C C + D DN C +E C H GLC
Sbjct: 857 SYDCT-CPDGFQLD--DNKTCQDINE-CE-HPGLC 886
Score = 45 (20.9 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 14/55 (25%), Positives = 23/55 (41%)
Query: 13 QVAYTLEPRTVKTDANRTNIKLKTGSSCPLRCDQRTDCQDCLTSSGGEGGWHECR 67
QV + P KT R + GS C + +DC + G G+++C+
Sbjct: 216 QVIPHVYPVAAKTQLGRC-FQETIGSQCGKALPGLSKQEDCCGTVGTSWGFNKCQ 269
>MGI|MGI:107471 [details] [associations]
symbol:Notch4 "notch 4" species:10090 "Mus musculus"
[GO:0001569 "patterning of blood vessels" evidence=IMP] [GO:0001763
"morphogenesis of a branching structure" evidence=IMP] [GO:0001886
"endothelial cell morphogenesis" evidence=ISO] [GO:0005509 "calcium
ion binding" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=TAS] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0009790 "embryo
development" evidence=IMP] [GO:0009986 "cell surface" evidence=ISO]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0030879 "mammary gland development" evidence=ISO]
[GO:0045446 "endothelial cell differentiation" evidence=ISO]
[GO:0045602 "negative regulation of endothelial cell
differentiation" evidence=IMP] [GO:0050793 "regulation of
developmental process" evidence=IEA] InterPro:IPR002110
InterPro:IPR000742 InterPro:IPR000800 InterPro:IPR001881
InterPro:IPR008297 InterPro:IPR011656 InterPro:IPR018097
Pfam:PF00008 Pfam:PF00023 Pfam:PF00066 Pfam:PF07645 Pfam:PF07684
PIRSF:PIRSF002279 PRINTS:PR01452 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004 SMART:SM00179
SMART:SM00181 SMART:SM00248 EMBL:AF030001 InterPro:IPR000152
MGI:MGI:107471 GO:GO:0016021 GO:GO:0005886 GO:GO:0005634
GO:GO:0009986 GO:GO:0030154 GO:GO:0006355 eggNOG:COG0666
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0007219 GO:GO:0005509 GO:GO:0006351
Reactome:REACT_115202 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0009790 GO:GO:0045602 GO:GO:0001569 PROSITE:PS01186
PROSITE:PS00010 Pfam:PF12661 SUPFAM:SSF90193 HOVERGEN:HBG052650
KO:K02599 CTD:4855 OrthoDB:EOG437RD0 InterPro:IPR022355
PRINTS:PR01987 EMBL:M80456 EMBL:U43691 EMBL:AB016771 EMBL:AB016772
EMBL:AB016773 EMBL:AB016774 IPI:IPI00136971 PIR:A38072 PIR:T09059
RefSeq:NP_035059.2 UniGene:Mm.173813 ProteinModelPortal:P31695
SMR:P31695 IntAct:P31695 STRING:P31695 PhosphoSite:P31695
PaxDb:P31695 PRIDE:P31695 GeneID:18132 KEGG:mmu:18132
InParanoid:P31695 NextBio:293372 CleanEx:MM_NOTCH4
Genevestigator:P31695 GermOnline:ENSMUSG00000015468 Uniprot:P31695
Length = 1964
Score = 140 (54.3 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 57/205 (27%), Positives = 76/205 (37%)
Query: 173 DSFSWNYVKCPPENE---CLNDHHTCDPQ----SEQCVDLADGFECVCGRGYNKSEEGGE 225
D+ S + +CPP + C ++ + C+P CV G+ C C GY EG
Sbjct: 905 DTGSSYFCRCPPGFQGKLCQDNMNPCEPNPCHHGSTCVPQPSGYVCQCAPGY----EGQN 960
Query: 226 CVPV---C-SQGCVR-GVC-SEPD--KCQCDFGYVGVNCSIQCQCNGHAD-CAG-PDKLD 275
C V C SQ C G C S P C C G+VG+ +C G D C P
Sbjct: 961 CSKVLEACQSQPCHNHGTCTSRPGGFHCACPPGFVGL------RCEGDVDECLDRPCHPS 1014
Query: 276 VCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESG 335
CH+ C +C P + G C + C C N + P G
Sbjct: 1015 GTAACHSLANAFYC-QCLPGHTGQ-----RCEVEMDLCQSQP--CSNGGSCEITTGPPPG 1066
Query: 336 GTSELAAFLDEGPTTRARCMHCGNH 360
T EGPT + + CG H
Sbjct: 1067 FTCHCPKGF-EGPTCSHKALSCGIH 1090
>UNIPROTKB|E1C414 [details] [associations]
symbol:ODZ2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007165 "signal transduction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR000742
InterPro:IPR009471 Pfam:PF06484 PROSITE:PS50026 PROSITE:PS51361
SMART:SM00181 GO:GO:0016021 GO:GO:0007165 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 Pfam:PF12661
GeneTree:ENSGT00660000095277 EMBL:AADN02035907 EMBL:AADN02035908
EMBL:AADN02035909 EMBL:AADN02035910 EMBL:AADN02035911
EMBL:AADN02035912 EMBL:AADN02035913 EMBL:AADN02035914
EMBL:AADN02035915 EMBL:AADN02035916 IPI:IPI00971442
Ensembl:ENSGALT00000029075 ArrayExpress:E1C414 Uniprot:E1C414
Length = 831
Score = 138 (53.6 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 60/187 (32%), Positives = 77/187 (41%)
Query: 195 CDPQSEQCVDLADG-----FE--CVCGRGYNKSE--EGGECV-PVCSQGCVRGVCSEPDK 244
CD QC+D + G E CVC GY K E E +C+ P CS GVC +
Sbjct: 633 CDVPISQCIDPSCGGHGSCIEGNCVCSIGY-KGENCEEVDCLDPTCSN---HGVCVNGE- 687
Query: 245 CQCDFGYVGVNCSI---QC--QCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGD 299
C C G+ G+NC + QC QC+GH L C C + GP C E V D
Sbjct: 688 CLCSPGWGGINCELPRAQCPDQCSGHGTYLSDTGL--C-SCDPNWMGPDCS-VEVCSV-D 742
Query: 300 PRDNGECVPCSEYCN-GHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHC- 357
+G C+ + C G TG+ + + P E G + EG HC
Sbjct: 743 CGTHGVCIGGACRCEEGWTGVACDQRVCH-PRCTEHGTCKDGKCECREGWNGE----HCT 797
Query: 358 -GNHTTG 363
G TTG
Sbjct: 798 IGRQTTG 804
Score = 42 (19.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 102 CPRSCSAYTQCSTCLRHAHCGW 123
CPR+C +C + + H G+
Sbjct: 576 CPRNCHGNGECVSGVCHCFPGF 597
Score = 40 (19.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 183 PPENECLNDHHT 194
PP N L+ HH+
Sbjct: 254 PPHNHSLSHHHS 265
>UNIPROTKB|B4DYR1 [details] [associations]
symbol:JAG1 "Delta-like protein" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0003215
"cardiac right ventricle morphogenesis" evidence=IEA] [GO:0005112
"Notch binding" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0032495 "response to muramyl dipeptide"
evidence=IEA] [GO:0035909 "aorta morphogenesis" evidence=IEA]
[GO:0042491 "auditory receptor cell differentiation" evidence=IEA]
[GO:0045177 "apical part of cell" evidence=IEA] [GO:0045599
"negative regulation of fat cell differentiation" evidence=IEA]
[GO:0045639 "positive regulation of myeloid cell differentiation"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0060411 "cardiac septum morphogenesis"
evidence=IEA] [GO:0061309 "cardiac neural crest cell development
involved in outflow tract morphogenesis" evidence=IEA] [GO:0061314
"Notch signaling involved in heart development" evidence=IEA]
[GO:0061444 "endocardial cushion cell development" evidence=IEA]
[GO:0072017 "distal tubule development" evidence=IEA] [GO:0072070
"loop of Henle development" evidence=IEA] InterPro:IPR000742
InterPro:IPR001007 InterPro:IPR001774 InterPro:IPR001881
InterPro:IPR018097 InterPro:IPR026219 Pfam:PF00008 Pfam:PF01414
Pfam:PF07645 PRINTS:PR02059 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51051 SMART:SM00051 SMART:SM00179 SMART:SM00181
SMART:SM00214 InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886
GO:GO:0045177 GO:GO:0045665 GO:GO:0007219 GO:GO:0005509
GO:GO:0045747 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
GO:GO:0009887 PROSITE:PS01186 GO:GO:0045599 PROSITE:PS00010
GO:GO:0072017 GO:GO:0032495 GO:GO:0042491 GO:GO:0002011
GO:GO:0072070 GO:GO:0045639 HOVERGEN:HBG031645 EMBL:AL035456
UniGene:Hs.224012 UniGene:Hs.626544 HGNC:HGNC:6188 ChiTaRS:JAG1
EMBL:AK302554 IPI:IPI01014559 SMR:B4DYR1 STRING:B4DYR1
Ensembl:ENST00000423891 UCSC:uc010gcd.1 Uniprot:B4DYR1
Length = 1059
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 47/161 (29%), Positives = 64/161 (39%)
Query: 195 CDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGV 254
C P+ C D C C G+ + +C+P GCV G+C+EP +C C+ + G
Sbjct: 79 CSPKHGSCKLPGD---CRCQYGW-QGLYCDKCIP--HPGCVHGICNEPWQCLCETNWGGQ 132
Query: 255 NCSIQCQ-CNGHADC--------AGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDN-G 304
C C H C GPDK C C GP C+ E + DP N G
Sbjct: 133 LCDKDLNYCGTHQPCLNGGTCSNTGPDKYQ-C-SCPEGYSGPNCEIAEHACLSDPCHNRG 190
Query: 305 ECVPCS-----EYCNGHTGLCINASLASL-PFSPESGGTSE 339
C S E G TG + ++ P + GGT +
Sbjct: 191 SCKETSLGFECECSPGWTGPTCSTNIDDCSPNNCSHGGTCQ 231
Score = 130 (50.8 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 60/202 (29%), Positives = 77/202 (38%)
Query: 188 CLNDHHTCDPQS----EQCVDLADGFECVCG---RGYNKSEEGGECV--P-VCSQGCVRG 237
C + C P + C DL +GF+CVC G + EC P V ++ C
Sbjct: 212 CSTNIDDCSPNNCSHGGTCQDLVNGFKCVCPPQWTGKTCQLDANECEAKPCVNAKSCKNL 271
Query: 238 VCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYV 297
+ S C C G++G NC I DC G + D C + G +C C P Y
Sbjct: 272 IASY--YCDCLPGWMGQNCDININ-----DCLGQCQNDAS--CRDLVNGYRCI-CPPGYA 321
Query: 298 GD--PRDNGECV--PCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRAR 353
GD RD EC PC GH IN P + SG +L E P
Sbjct: 322 GDHCERDIDECASNPCLN--GGHCQNEINRFQCLCP-TGFSGNLCQLDIDYCE-PNPCQN 377
Query: 354 CMHCGNHTTGP--KCEDCVEGK 373
C N + KC + EGK
Sbjct: 378 GAQCYNRASDYFCKCPEDYEGK 399
>UNIPROTKB|F1NI05 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IEA]
[GO:0016477 "cell migration" evidence=IEA] [GO:0022617
"extracellular matrix disassembly" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] GO:GO:0016477 GO:GO:0006461 GO:GO:0007155
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0031581 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
PROSITE:PS51115 PROSITE:PS51117 GeneTree:ENSGT00690000102103
GO:GO:0043259 EMBL:AADN02034183 EMBL:AADN02034182 IPI:IPI00822825
Ensembl:ENSGALT00000039414 ArrayExpress:F1NI05 Uniprot:F1NI05
Length = 1007
Score = 136 (52.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 43/144 (29%), Positives = 64/144 (44%)
Query: 202 CVDLADGFECV-CGRGYNK--SEEGGECVPV-CSQ-GCVRGVCSEPDKCQCDFGYVGVNC 256
C D DG C C + + SEEG C+P C+ G + C +C C G +G C
Sbjct: 125 CRDNTDGAHCERCRDSFYRLGSEEG--CLPCSCNPVGSLSTQCDSYGQCSCKPGVMGEKC 182
Query: 257 --------SIQ------CQCNGHADCAGPDKLDV--CLRCHNHTKGPQCDKCEPLYVG-D 299
S+ C CN A G ++ C C ++ +G C++C+P + D
Sbjct: 183 DRCQPGFHSLSEAGCRPCSCNP-AGSTGECNMETGRCT-CKDNVEGFHCERCKPGFFHLD 240
Query: 300 PRDNGECVPCSEYCNGHTGLCINA 323
P + C PC +C GH+ +C NA
Sbjct: 241 PSNPRGCTPC--FCFGHSSVCTNA 262
Score = 123 (48.4 bits), Expect = 0.00034, P = 0.00034
Identities = 50/182 (27%), Positives = 64/182 (35%)
Query: 211 CVC-GRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVG---VNCSIQCQ---CN 263
C C G E G C C C +KC D GY G ++ CQ C
Sbjct: 479 CTCNGHSETCDPETGMCD--CRDNTAGSHC---EKCS-D-GYYGDATAGTALDCQPCPCP 531
Query: 264 GHADCAG-P-DKLDVCLRCHNHTKGPQCDKCEPLYVGDPR-DNGECVPCS---------- 310
G + CA P K VC C T G +C+ C+ Y GDP +NG PC
Sbjct: 532 GGSSCAVVPRTKEVVCTSCQTGTTGKRCELCDDAYFGDPLGENGAVRPCRLCQCNDNIDP 591
Query: 311 ---EYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCE 367
CN TG C+ + F + L P + R HC + T +
Sbjct: 592 NAVGNCNRQTGECLKCIYNTAGFYCDRCKDGFFGNPLATNPADKCRACHCNPYGTVNQQT 651
Query: 368 DC 369
C
Sbjct: 652 SC 653
Score = 46 (21.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 357 CGNHTTGPKCEDCVEG 372
C ++T G CE C +G
Sbjct: 497 CRDNTAGSHCEKCSDG 512
>UNIPROTKB|F1P8S6 [details] [associations]
symbol:DLK1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 Pfam:PF00008 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186 PROSITE:PS00010
GeneTree:ENSGT00690000102125 Pfam:PF12661 CTD:8788 OMA:CQKKDGP
EMBL:AAEX03006004 RefSeq:XP_547982.4 Ensembl:ENSCAFT00000028452
GeneID:490860 KEGG:cfa:490860 Uniprot:F1P8S6
Length = 383
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 50/156 (32%), Positives = 67/156 (42%)
Query: 195 CDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGV 254
C PQ+ C D D C C G+ + +CV GCV G+C EP +C CD G+ G
Sbjct: 30 CHPQNGFCED--DNV-CRCQPGW-QGPLCDQCVTF--PGCVNGLCVEPWQCICDDGWDGN 83
Query: 255 NCSIQCQCNGHADCAGPDKLDVCLRCH-NHTKGPQCDKCEPLYVGDP--RDNGECVPCSE 311
C I + A CA C+ +H +C C P + G + +G CV
Sbjct: 84 LCDIDIRACASAPCANNG---TCVNLDASHY---ECS-CAPGFSGKDCQKKDGPCVINGS 136
Query: 312 YCNGHTGLCIN----ASLASLPFSPE-SGGTSELAA 342
C H G C++ AS AS P SG E+ A
Sbjct: 137 PCQ-HGGSCVDDEGRASHASCLCPPGFSGNFCEIVA 171
>RGD|619931 [details] [associations]
symbol:Dlk1 "delta-like 1 homolog (Drosophila)" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0009790 "embryo
development" evidence=ISO] [GO:0009791 "post-embryonic development"
evidence=ISO] [GO:0009897 "external side of plasma membrane"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IDA]
[GO:0045746 "negative regulation of Notch signaling pathway"
evidence=ISO] [GO:0048706 "embryonic skeletal system development"
evidence=ISO] InterPro:IPR000742 InterPro:IPR001881 Pfam:PF00008
PROSITE:PS50026 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:619931 GO:GO:0030154 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 PROSITE:PS00010 HSSP:P00740
Pfam:PF12661 HOVERGEN:HBG007065 IPI:IPI00388901 UniGene:Rn.14547
EMBL:U25680 ProteinModelPortal:Q62779 STRING:Q62779 UCSC:RGD:619931
InParanoid:Q62779 Genevestigator:Q62779 Uniprot:Q62779
Length = 383
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 52/155 (33%), Positives = 64/155 (41%)
Query: 195 CDPQSEQCVDLADGFECVCGRGYNKSEEGGECVP-VCSQGCVRGVCSEPDKCQCDFGYVG 253
CDPQ C AD C C G+ EG C V S GCV G+C EP +C C G+ G
Sbjct: 30 CDPQHGFCE--ADNV-CRCEPGW----EGPLCEKCVTSPGCVNGLCEEPWQCVCKEGWDG 82
Query: 254 VNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGP-QCDKCEPLYVGDPRDN--GECVPCS 310
C I + CA C + KG +C C P + G + G CV
Sbjct: 83 KFCEIDIRACTSTPCANNGT------CVDLEKGQYECS-CTPGFSGKDCQHKAGPCVING 135
Query: 311 EYCNGHTGLCIN----ASLASLPFSPE-SGGTSEL 340
C H G C++ AS AS P SG E+
Sbjct: 136 SPCQ-HGGACVDDEGRASHASCLCPPGFSGNFCEI 169
>UNIPROTKB|O70534 [details] [associations]
symbol:Dlk1 "Protein Dlk1" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0009897
"external side of plasma membrane" evidence=IEA] [GO:0045746
"negative regulation of Notch signaling pathway" evidence=IEA]
[GO:0048706 "embryonic skeletal system development" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 Pfam:PF00008 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 RGD:619931
GO:GO:0009897 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0009791 PROSITE:PS01186 PROSITE:PS00010
GeneTree:ENSGT00690000102125 GO:GO:0048706 GO:GO:0045746
HSSP:P00740 Pfam:PF12661 CTD:8788 eggNOG:NOG306005
HOGENOM:HOG000072581 HOVERGEN:HBG007065 OMA:CQKKDGP
OrthoDB:EOG44MXS5 EMBL:BC167752 EMBL:D84336 IPI:IPI00388901
RefSeq:NP_446196.1 UniGene:Rn.14547 STRING:O70534
Ensembl:ENSRNOT00000006339 GeneID:114587 KEGG:rno:114587
InParanoid:O70534 NextBio:618729 Genevestigator:O70534
Uniprot:O70534
Length = 383
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 52/155 (33%), Positives = 64/155 (41%)
Query: 195 CDPQSEQCVDLADGFECVCGRGYNKSEEGGECVP-VCSQGCVRGVCSEPDKCQCDFGYVG 253
CDPQ C AD C C G+ EG C V S GCV G+C EP +C C G+ G
Sbjct: 30 CDPQHGFCE--ADNV-CRCEPGW----EGPLCEKCVTSPGCVNGLCEEPWQCVCKEGWDG 82
Query: 254 VNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGP-QCDKCEPLYVGDPRDN--GECVPCS 310
C I + CA C + KG +C C P + G + G CV
Sbjct: 83 KFCEIDIRACTSTPCANNGT------CVDLEKGQYECS-CTPGFSGKDCQHKAGPCVING 135
Query: 311 EYCNGHTGLCIN----ASLASLPFSPE-SGGTSEL 340
C H G C++ AS AS P SG E+
Sbjct: 136 SPCQ-HGGACVDDEGRASHASCLCPPGFSGNFCEI 169
>UNIPROTKB|F1LWS0 [details] [associations]
symbol:Lama5 "Protein Lama5" species:10116 "Rattus
norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 RGD:621023 GO:GO:0030155 GO:GO:0007155
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995
InterPro:IPR000034 Pfam:PF00052 PROSITE:PS51115 GO:GO:0005606
IPI:IPI00566251 Ensembl:ENSRNOT00000051597 ArrayExpress:F1LWS0
Uniprot:F1LWS0
Length = 1728
Score = 139 (54.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 56/177 (31%), Positives = 74/177 (41%)
Query: 220 SEEGGECVPVCSQGCVRGVCSEPDKCQ-CDFGYV----GV---NCSIQCQCNGHADCAGP 271
SE GG + C+ D CQ C GY G+ C + CQC+GH+D P
Sbjct: 60 SEAGGGPPASNVELCMCPANYRGDSCQECAPGYYRDTKGLFLGRC-VPCQCHGHSDRCLP 118
Query: 272 DKLDVCLRCHNHTKGPQCDKCEPLYVG-DPRDNGE-CV--PC--SEYCNGHTGLCI--NA 323
C+ C ++T+G QC++C P +V DP D CV PC + N CI N
Sbjct: 119 GS-GTCVGCQHNTEGDQCERCRPGFVSSDPSDPASPCVSCPCPLAVPSNNFADGCILRNG 177
Query: 324 SLASL---PFSPES-GGTSELAAF-LDEGPTTR---ARCMHCGNHTTGPKCEDCVEG 372
+ F E G A EG +C HC TTGP+C +C G
Sbjct: 178 RTQRVLEGHFGFEQCQGCHPCACGPAAEGSECNPQTGQC-HCRPGTTGPQCLECAPG 233
>MGI|MGI:94900 [details] [associations]
symbol:Dlk1 "delta-like 1 homolog (Drosophila)" species:10090
"Mus musculus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0009790 "embryo development" evidence=IDA] [GO:0009791
"post-embryonic development" evidence=IDA] [GO:0009897 "external
side of plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=ISO] [GO:0045746
"negative regulation of Notch signaling pathway" evidence=IGI]
[GO:0048706 "embryonic skeletal system development" evidence=IDA]
InterPro:IPR000742 InterPro:IPR001881 Pfam:PF00008 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 MGI:MGI:94900
GO:GO:0016021 GO:GO:0009897 GO:GO:0005509 Reactome:REACT_115202
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0009791 PROSITE:PS01186
PROSITE:PS00010 GO:GO:0048706 GO:GO:0045746 CTD:8788
eggNOG:NOG306005 HOGENOM:HOG000072581 HOVERGEN:HBG007065
ChiTaRS:DLK1 EMBL:Z12171 EMBL:U15980 EMBL:L12721 EMBL:S71340
EMBL:D16847 IPI:IPI00121716 IPI:IPI00226664 IPI:IPI00226665
IPI:IPI00321359 IPI:IPI00918517 IPI:IPI01008291 PIR:A54785
PIR:S53718 RefSeq:NP_034182.2 UniGene:Mm.157069
ProteinModelPortal:Q09163 SMR:Q09163 DIP:DIP-6010N IntAct:Q09163
STRING:Q09163 GlycoSuiteDB:Q09163 PhosphoSite:Q09163 PRIDE:Q09163
GeneID:13386 KEGG:mmu:13386 InParanoid:Q09163 OrthoDB:EOG44MXS5
NextBio:283744 CleanEx:MM_DLK1 Genevestigator:Q09163
GermOnline:ENSMUSG00000040856 Uniprot:Q09163
Length = 385
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 53/157 (33%), Positives = 65/157 (41%)
Query: 195 CDPQSEQCVDLADGFECVCGRGYNKSEEGGECVP-VCSQGCVRGVCSEPDKCQCDFGYVG 253
CDPQ C AD C C G+ EG C V + GCV GVC EP +C C G+ G
Sbjct: 30 CDPQYGFCE--ADNV-CRCHVGW----EGPLCDKCVTAPGCVNGVCKEPWQCICKDGWDG 82
Query: 254 VNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGP-QCDKCEPLYVGDPRDN--GECVPCS 310
C I + CA C + KG +C C P + G + G CV
Sbjct: 83 KFCEIDVRACTSTPCANNGT------CVDLEKGQYECS-CTPGFSGKDCQHKAGPCVING 135
Query: 311 EYCNGHTGLCIN----ASLASLPFSPE-SGGTSELAA 342
C H G C++ AS AS P SG E+ A
Sbjct: 136 SPCQ-HGGACVDDEGQASHASCLCPPGFSGNFCEIVA 171
>MGI|MGI:95488 [details] [associations]
symbol:Fbln2 "fibulin 2" species:10090 "Mus musculus"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0010811 "positive regulation of cell-substrate
adhesion" evidence=IDA] [GO:0050840 "extracellular matrix binding"
evidence=IDA] InterPro:IPR000020 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF01821 Pfam:PF07645
PROSITE:PS01177 PROSITE:PS01178 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00104 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
MGI:MGI:95488 GO:GO:0005578 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 GO:GO:0010811 eggNOG:NOG12793
PROSITE:PS00010 EMBL:CH466523 GO:GO:0050840 InterPro:IPR026823
Pfam:PF12662 HOGENOM:HOG000007079 HOVERGEN:HBG051559
GeneTree:ENSGT00700000104154 CTD:2199 OMA:HSVPRGD EMBL:X75285
EMBL:AF135253 EMBL:AF135239 EMBL:AF135240 EMBL:AF135241
EMBL:AF135242 EMBL:AF135243 EMBL:AF135244 EMBL:AF135245
EMBL:AF135246 EMBL:AF135247 EMBL:AF135248 EMBL:AF135249
EMBL:AF135250 EMBL:AF135251 EMBL:AF135252 EMBL:AC121990
EMBL:AC131764 IPI:IPI00132067 IPI:IPI00750260 PIR:A49457
RefSeq:NP_032018.2 UniGene:Mm.249146 UniGene:Mm.410235
ProteinModelPortal:P37889 IntAct:P37889 STRING:P37889
PhosphoSite:P37889 PaxDb:P37889 PRIDE:P37889
Ensembl:ENSMUST00000041544 Ensembl:ENSMUST00000113498 GeneID:14115
KEGG:mmu:14115 UCSC:uc009cxw.1 InParanoid:P37889 OrthoDB:EOG4JHCDW
NextBio:285174 PMAP-CutDB:P37889 CleanEx:MM_FBLN2
Genevestigator:P37889 GermOnline:ENSMUSG00000064080 Uniprot:P37889
Length = 1221
Score = 116 (45.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 36/140 (25%), Positives = 54/140 (38%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG----CV 235
C NEC + C S++C ++ ++C C +GY +E+G C + C+QG C
Sbjct: 978 CEDVNEC--ETRRC---SQECANIYGSYQCYCRQGYQLAEDGHTCTDIDECAQGAGILCT 1032
Query: 236 RGVCSEPDKCQCDFGYVGVNCSIQCQ-CNGHADCA-GPDKLDVCLRCHNHTKGPQCDK-- 291
+ P QC G + C +CA G CHN +C +
Sbjct: 1033 FRCVNVPGSYQCACPEQGYTMMANGRSCKDLDECALGTHNCSEAETCHNIQGSFRCLRFD 1092
Query: 292 CEPLYVGDPRDNGECVPCSE 311
C P YV E C +
Sbjct: 1093 CPPNYVRVSETKCERTTCQD 1112
Score = 107 (42.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 35/104 (33%), Positives = 44/104 (42%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFEC-----VCGRGYNKSEEGGECVPV--CSQGC 234
C NEC + C C++ + C VCGRGY+ +EEG ECV V C G
Sbjct: 845 CVDINECTSLLEPCR-SGFSCINTVGSYTCQRNPLVCGRGYHANEEGSECVDVNECETGV 903
Query: 235 VRGVCSEPDKCQCDFGYVGVNCSIQCQCN-G-HADCAGPDKLDV 276
R C E C + G S +C C G D G +DV
Sbjct: 904 HR--CGEGQLC---YNLPG---SYRCDCKPGFQRDAFGRTCIDV 939
Score = 69 (29.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 18/64 (28%), Positives = 27/64 (42%)
Query: 62 GWHECRWSSMLNECISPSYEALYCAGG--VC--GLVLGPHQAPQCPRSCSAYTQCSTCLR 117
G H+C W C++ + + YC +C G +L H+ +C T TC R
Sbjct: 716 GTHDCSWKQF---CVN-TLGSFYCVNHTVLCAEGYILNAHR--KCVDINECVTDLHTCTR 769
Query: 118 HAHC 121
HC
Sbjct: 770 AEHC 773
>UNIPROTKB|G3V6X1 [details] [associations]
symbol:Fbln2 "Fibulin 2, isoform CRA_a" species:10116
"Rattus norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0010811
"positive regulation of cell-substrate adhesion" evidence=IEA]
[GO:0050840 "extracellular matrix binding" evidence=IEA]
InterPro:IPR000020 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF01821 Pfam:PF07645 PROSITE:PS01177
PROSITE:PS01178 PROSITE:PS01187 PROSITE:PS50026 SMART:SM00104
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 RGD:628685
GO:GO:0005576 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS01186
PROSITE:PS00010 EMBL:CH473957 InterPro:IPR026823 Pfam:PF12662
GeneTree:ENSGT00700000104154 RefSeq:XP_001062865.3 UniGene:Rn.7350
Ensembl:ENSRNOT00000009696 GeneID:282583 KEGG:rno:282583
NextBio:624797 Uniprot:G3V6X1
Length = 1221
Score = 116 (45.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 36/140 (25%), Positives = 54/140 (38%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG----CV 235
C NEC + C S++C ++ ++C C +GY +E+G C + C+QG C
Sbjct: 978 CEDVNEC--ETRRC---SQECANIYGSYQCYCRQGYQLAEDGHTCTDIDECAQGAGILCT 1032
Query: 236 RGVCSEPDKCQCDFGYVGVNCSIQCQ-CNGHADCA-GPDKLDVCLRCHNHTKGPQCDK-- 291
+ P QC G + C +CA G CHN +C +
Sbjct: 1033 FRCVNVPGSYQCACPEQGYTMMANGRSCKDLDECALGTHNCSEAETCHNIQGSFRCLRFD 1092
Query: 292 CEPLYVGDPRDNGECVPCSE 311
C P YV E C +
Sbjct: 1093 CPPNYVRVSETKCERTTCQD 1112
Score = 99 (39.9 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 34/104 (32%), Positives = 43/104 (41%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFEC-----VCGRGYNKSEEGGECVPV--CSQGC 234
C NEC + C C++ + C VC RGY+ +EEG ECV V C G
Sbjct: 845 CVDINECTSLLEPCR-SGFSCINTVGSYTCQRNPLVCRRGYHANEEGSECVDVNECETGV 903
Query: 235 VRGVCSEPDKCQCDFGYVGVNCSIQCQCN-G-HADCAGPDKLDV 276
R C E C + G S +C C G D G +DV
Sbjct: 904 HR--CGEGQLC---YNLPG---SYRCDCKPGFQRDAFGRTCIDV 939
Score = 69 (29.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 18/64 (28%), Positives = 27/64 (42%)
Query: 62 GWHECRWSSMLNECISPSYEALYCAGG--VC--GLVLGPHQAPQCPRSCSAYTQCSTCLR 117
G H+C W C++ + + YC +C G +L H+ +C T TC R
Sbjct: 716 GTHDCSWKQF---CVN-TLGSFYCVNHTVLCAEGYILNAHR--KCVDINECVTDLHTCTR 769
Query: 118 HAHC 121
HC
Sbjct: 770 AEHC 773
>UNIPROTKB|F1PYQ8 [details] [associations]
symbol:MEGF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR011489
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
InterPro:IPR026823 Pfam:PF12662 Pfam:PF12661
GeneTree:ENSGT00690000101691 EMBL:AAEX03003878 EMBL:AAEX03003879
Ensembl:ENSCAFT00000030970 Uniprot:F1PYQ8
Length = 1573
Score = 121 (47.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 37/129 (28%), Positives = 50/129 (38%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCSE 241
C EC + +CDP S QCV A + +C +G G C C C G +
Sbjct: 1431 CRAACECQHGA-SCDPVSGQCVCPAGFYGQLCEKGCEPGSFGEGCREHCD--CEMGAACD 1487
Query: 242 P--DKCQCDFGYVGVNCSIQCQ-------CNGHADCAGP---DKLDVCLRCHNHTKGPQC 289
P +C C G G C + C+ C C G D + RC + GP C
Sbjct: 1488 PITGQCLCPPGRTGATCDLDCRPDFFGPGCALRCSCGGGAACDPVSGQCRCVDGYMGPTC 1547
Query: 290 DKCEPLYVG 298
+ EP + G
Sbjct: 1548 QQGEPGFQG 1556
Score = 110 (43.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 47/162 (29%), Positives = 68/162 (41%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLAD--GFEC--VCGRG-YN-KSEEGGECVPVCSQG-- 233
C CLN CD +S +C+ A G +C +C G + + EE C C +G
Sbjct: 1086 CKHSCRCLNGGD-CDRRSGRCLCPAGWTGDQCQSLCAEGTFGVRCEE--HCA--CRRGAT 1140
Query: 234 C--VRGVCSEP-----DKCQ--CDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHT 284
C V G C P +C+ C G+ G C+ +CQC A C C RC
Sbjct: 1141 CHHVTGACLCPPGWRGSRCENACPHGWFGEACAQRCQCPPGAACH--HVTGEC-RCPRGF 1197
Query: 285 KGPQCDK-CEPLYVGDP-RDNGECVPCSEYCNGHTGLCINAS 324
GP C++ C P G+ C ++ C+ G C+ A+
Sbjct: 1198 TGPGCEQACPPGTFGESCGQKCHCPGENQACHPALGTCVCAA 1239
Score = 110 (43.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 46/162 (28%), Positives = 65/162 (40%)
Query: 177 WNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECV-CGRGYNKSEEGGECV-P-VCSQG 233
W C C ND C P + C A G+ + C R + G +C P CS G
Sbjct: 822 WFGPGCQMRCSCANDG-LCHPVTGHC-SCAPGWTGLSCQRACDGGRWGPDCSHPCTCSPG 879
Query: 234 ---C--VRGVC-SEPD----KCQ--CDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCH 281
C V G+C E +C+ C G+ G C QCQC A C D + C
Sbjct: 880 HGSCDAVSGLCVCEAGYTGPRCEQRCPQGHFGPGCGRQCQCEHGAAC---DHVSGACTCP 936
Query: 282 NHTKGPQCDK-CEPLYVG-DPRDNGECVPCSEYCNGHTGLCI 321
+G C++ C + G D R +C + C+ +G C+
Sbjct: 937 AGWRGALCERACPAGFFGLDCRGVCDCAAGAP-CDSVSGSCL 977
Score = 104 (41.7 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 44/149 (29%), Positives = 54/149 (36%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFEC-VCGRGYNKSEEGGECVPVCSQGCVRGVCS 240
C E C N+ TC+P + C GF C G C C C G
Sbjct: 1388 CRLECSCQNNG-TCEPTTGAC-RCGPGFYGQACQHACPPGFHGAGCRAACE--CQHGASC 1443
Query: 241 EP--DKCQCDFGYVGVNCSIQCQ-------CNGHADC---AGPDKLD-VCLRCHNHTKGP 287
+P +C C G+ G C C+ C H DC A D + CL C G
Sbjct: 1444 DPVSGQCVCPAGFYGQLCEKGCEPGSFGEGCREHCDCEMGAACDPITGQCL-CPPGRTGA 1502
Query: 288 QCD-KCEPLYVGDPRDNGECVPCSEYCNG 315
CD C P + G P G + CS C G
Sbjct: 1503 TCDLDCRPDFFG-P---GCALRCS--CGG 1525
Score = 103 (41.3 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 46/160 (28%), Positives = 61/160 (38%)
Query: 221 EEGGECVPVCSQGCVRGVCSEPDKCQ--CDFGYVGVNCSIQCQCNGHADCAGPDKLDVCL 278
+ G C P C G CQ C G+ G C C+C A C P C+
Sbjct: 1395 QNNGTCEPTTG-ACRCGPGFYGQACQHACPPGFHGAGCRAACECQHGASC-DPVS-GQCV 1451
Query: 279 RCHNHTKGPQCDK-CEPLYVGDP-RDNGECVPCSEYCNGHTGLCINASLASLPFSPESGG 336
C G C+K CEP G+ R++ +C C+ TG C+ P +G
Sbjct: 1452 -CPAGFYGQLCEKGCEPGSFGEGCREHCDC-EMGAACDPITGQCL------CP-PGRTGA 1502
Query: 337 TSELAAFLDE-GPTTRARCMHCGNHTTGP---KCEDCVEG 372
T +L D GP RC G P +C CV+G
Sbjct: 1503 TCDLDCRPDFFGPGCALRCSCGGGAACDPVSGQCR-CVDG 1541
Score = 80 (33.2 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV 229
C +EC + C+ C +LA F+C C G+ E+ CVP+
Sbjct: 409 CEDVDECASGRGGCE---HHCANLAGSFQCSCEAGFRLDEDRRGCVPL 453
Score = 66 (28.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 27/101 (26%), Positives = 32/101 (31%)
Query: 42 LRCDQRTDCQDCLTSSGGEGGWHECR----WSSMLNECISPSYEALYCAGGVCGLVL-GP 96
L CD+R C GE EC L C P A G C
Sbjct: 663 LACDRRDGSCSCKAGFQGERCQDECAPGFFGPGCLQACTCPQGVACDPISGQCEKQCPAG 722
Query: 97 HQAPQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVC 137
+Q C + C A T C +CG R T G +C
Sbjct: 723 YQGKGCDQECPAGTFGVNCSGSCYCGGAPCNRVT--GQCLC 761
Score = 60 (26.2 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 26/101 (25%), Positives = 36/101 (35%)
Query: 37 GSSCPLRCDQRTDCQDCLTSSGGEGGWHECR--WSSML-NECISPSYEALYCA------- 86
G C L CD DC++ G G +C W+ ++ NE P C+
Sbjct: 518 GQDCSLTCD---DCRNGGACLPGLDGC-DCPEGWTGLICNETCPPDTFGKNCSLSCGCQN 573
Query: 87 GGVCGLVLGPHQAP------QCPRSCSAYTQCSTCLRHAHC 121
GG C V G + P +C C C + HC
Sbjct: 574 GGTCDPVTGACRCPPGVGGTRCEDGCPKGFYGKQCHKKCHC 614
Score = 52 (23.4 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 20/75 (26%), Positives = 26/75 (34%)
Query: 53 CLTSSGGEGGWHE--CR--W--SSMLNECISPSYEALYCAGGVCGLVLGPHQAPQCPRSC 106
CL G G E C W + C P A + G C G P C ++C
Sbjct: 1148 CLCPPGWRGSRCENACPHGWFGEACAQRCQCPPGAACHHVTGECRCPRG-FTGPGCEQAC 1206
Query: 107 SAYTQCSTCLRHAHC 121
T +C + HC
Sbjct: 1207 PPGTFGESCGQKCHC 1221
Score = 51 (23.0 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 18/66 (27%), Positives = 25/66 (37%)
Query: 39 SCP--LRCDQRT-DCQ-DCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVL 94
+CP + CD + C+ C G+G EC + C + YC G C V
Sbjct: 701 TCPQGVACDPISGQCEKQCPAGYQGKGCDQECPAGTFGVNCSG----SCYCGGAPCNRVT 756
Query: 95 GPHQAP 100
G P
Sbjct: 757 GQCLCP 762
>UNIPROTKB|F1MNT4 [details] [associations]
symbol:LAMB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0043259 "laminin-10 complex" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0042476
"odontogenesis" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0007566 "embryo implantation" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005178 "integrin binding"
evidence=IEA] GO:GO:0048471 GO:GO:0005615 GO:GO:0016477
GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0042476 GO:GO:0007566 InterPro:IPR009053
SUPFAM:SSF46579 GO:GO:0005201 GO:GO:0043208 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005606
GO:GO:0043259 GeneTree:ENSGT00620000087753 InterPro:IPR013015
PROSITE:PS51116 EMBL:DAAA02010597 EMBL:DAAA02010596 IPI:IPI01017612
Ensembl:ENSBTAT00000015166 OMA:NTWQLAS Uniprot:F1MNT4
Length = 1798
Score = 139 (54.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 50/156 (32%), Positives = 70/156 (44%)
Query: 226 CVPVCSQ-GCVRGVCSEPDKC-QCDFGYVGVNCSIQCQCNGHAD-CAGPDKLD-VCLRCH 281
C P+ Q C +GV + +C +C G+ G CQCNGHAD C D + CL C
Sbjct: 845 CDPITGQCHCFQGVYTR--QCDRCLPGFWGFPSCQPCQCNGHADDC---DSVTGECLSCQ 899
Query: 282 NHTKGPQCDKCEPLYVGDPR-DNGE-CVPCSEYCNGHTGLCINASLASLPFSPESGGTSE 339
++T G C++C Y GDP +G+ C PC +G +S P S +
Sbjct: 900 DYTTGHNCERCLAGYYGDPVIGSGDHCRPCPCPDGPESGRQFASSCYQDPVS------LQ 953
Query: 340 LAAFLDEGPTTRARCMHC-----GNHT-TGPKCEDC 369
LA + G +RC C GN + G C+ C
Sbjct: 954 LACVCNPG-YIGSRCDECASGFFGNPSDVGGTCQPC 988
Score = 127 (49.8 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 47/159 (29%), Positives = 64/159 (40%)
Query: 229 VCSQGCVRGVCSEPDKCQCDF-GY---VGVNCSIQCQCNGHADCAGPDKLDV----CLRC 280
VC+ G + C D+C F G VG C CQC+ + D A P+ D CL+C
Sbjct: 957 VCNPGYIGSRC---DECASGFFGNPSDVGGTCQ-PCQCHHNIDTADPEACDKETGRCLKC 1012
Query: 281 HNHTKGPQCDKCEPLYVGDP--RDNGECVPCS------EYCNGHTGLCINASLASLPFSP 332
HT+G C C Y GD +D +CV C+ E+CNG C + L
Sbjct: 1013 LYHTEGEHCQLCRFGYYGDALRQDCRKCV-CNYLGTVQEHCNGSDCQCDKTTGQCLCLPN 1071
Query: 333 ESGGTSELAAFLDEGPTTRARCMHCG---NHTTGPKCED 368
G + A + C C H+ GP C +
Sbjct: 1072 VIGQNCDRCAPNTWQLASGTGCDPCSCDAAHSFGPSCNE 1110
Score = 44 (20.5 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 50 CQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYC 85
C CL G C+ + ++C S + E L C
Sbjct: 863 CDRCLPGFWGFPSCQPCQCNGHADDCDSVTGECLSC 898
>UNIPROTKB|J3QLU9 [details] [associations]
symbol:ERBB2 "Receptor tyrosine-protein kinase erbB-2"
species:9606 "Homo sapiens" [GO:0004714 "transmembrane receptor
protein tyrosine kinase activity" evidence=IEA] [GO:0007169
"transmembrane receptor protein tyrosine kinase signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000494 InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR006211 InterPro:IPR008266
InterPro:IPR011009 InterPro:IPR017441 InterPro:IPR020635
Pfam:PF00757 Pfam:PF01030 Pfam:PF07714 PRINTS:PR00109
PROSITE:PS00107 PROSITE:PS00109 PROSITE:PS50011 SMART:SM00219
GO:GO:0005524 GO:GO:0016020 GO:GO:0004714 SUPFAM:SSF56112
GO:GO:0007169 InterPro:IPR006212 InterPro:IPR009030 SMART:SM00261
SUPFAM:SSF57184 HGNC:HGNC:3430 ChiTaRS:ERBB2 EMBL:AC079199
EMBL:AC087491 ProteinModelPortal:J3QLU9 Ensembl:ENST00000584450
Uniprot:J3QLU9
Length = 1055
Score = 108 (43.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 45/152 (29%), Positives = 65/152 (42%)
Query: 193 HTCDPQSEQCVDLADGFEC--VCGRGYNKSEEGGECVPVCSQGCVRGV-CSEPDKCQCDF 249
HT + ++CV +G C +C RG+ +CV CSQ +RG C E +C+
Sbjct: 495 HTANRPEDECV--GEGLACHQLCARGHCWGPGPTQCVN-CSQ-FLRGQECVE--ECRVLQ 548
Query: 250 G----YVGVN----CSIQCQC-NGHADCAGPDKLDVCLRCHNHTKGPQC-DKCEPLYVGD 299
G YV C +CQ NG C GP+ D C+ C ++ P C +C D
Sbjct: 549 GLPREYVNARHCLPCHPECQPQNGSVTCFGPEA-DQCVACAHYKDPPFCVARCPSGVKPD 607
Query: 300 ---------PRDNGECVPCSEYCNGHTGLCIN 322
P + G C PC C H+ C++
Sbjct: 608 LSYMPIWKFPDEEGACQPCPINCT-HS--CVD 636
Score = 76 (31.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 26/83 (31%), Positives = 30/83 (36%)
Query: 50 CQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQAPQCPRSCSA- 108
C C G W E SS +C S CAGG C GP C C+A
Sbjct: 192 CHPCSPMCKGSRCWGE---SS--EDC--QSLTRTVCAGG-CARCKGPLPTDCCHEQCAAG 243
Query: 109 -----YTQCSTCLRHAHCGWCAL 126
++ C CL H G C L
Sbjct: 244 CTGPKHSDCLACLHFNHSGICEL 266
>UNIPROTKB|P78504 [details] [associations]
symbol:JAG1 "Protein jagged-1" species:9606 "Homo sapiens"
[GO:0002011 "morphogenesis of an epithelial sheet" evidence=IEA]
[GO:0032495 "response to muramyl dipeptide" evidence=IEA]
[GO:0042491 "auditory receptor cell differentiation" evidence=IEA]
[GO:0045177 "apical part of cell" evidence=IEA] [GO:0045599
"negative regulation of fat cell differentiation" evidence=IEA]
[GO:0045639 "positive regulation of myeloid cell differentiation"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IEA] [GO:0072017 "distal tubule
development" evidence=IEA] [GO:0072070 "loop of Henle development"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=NAS] [GO:0001709 "cell fate determination" evidence=NAS]
[GO:0007219 "Notch signaling pathway" evidence=IMP;NAS;TAS]
[GO:0030097 "hemopoiesis" evidence=NAS] [GO:0001525 "angiogenesis"
evidence=NAS] [GO:0030216 "keratinocyte differentiation"
evidence=NAS] [GO:0008083 "growth factor activity" evidence=NAS]
[GO:0005198 "structural molecule activity" evidence=NAS]
[GO:0007399 "nervous system development" evidence=NAS] [GO:0030334
"regulation of cell migration" evidence=NAS] [GO:0045445 "myoblast
differentiation" evidence=NAS] [GO:0045446 "endothelial cell
differentiation" evidence=NAS] [GO:0016020 "membrane" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=NAS] [GO:0007275
"multicellular organismal development" evidence=NAS] [GO:0005112
"Notch binding" evidence=NAS] [GO:0042127 "regulation of cell
proliferation" evidence=NAS] [GO:0005576 "extracellular region"
evidence=NAS] [GO:0097150 "neuronal stem cell maintenance"
evidence=IEP] [GO:2000737 "negative regulation of stem cell
differentiation" evidence=IMP] [GO:0005886 "plasma membrane"
evidence=IDA;TAS] [GO:0007220 "Notch receptor processing"
evidence=TAS] [GO:0003184 "pulmonary valve morphogenesis"
evidence=IMP] [GO:0061156 "pulmonary artery morphogenesis"
evidence=IMP] [GO:0061314 "Notch signaling involved in heart
development" evidence=IC;IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0003215 "cardiac right ventricle morphogenesis" evidence=ISS]
[GO:0035909 "aorta morphogenesis" evidence=ISS] [GO:0060411
"cardiac septum morphogenesis" evidence=ISS] [GO:0061309 "cardiac
neural crest cell development involved in outflow tract
morphogenesis" evidence=ISS] [GO:0061444 "endocardial cushion cell
development" evidence=ISS] Reactome:REACT_2001 InterPro:IPR000742
InterPro:IPR001007 InterPro:IPR001774 InterPro:IPR001881
InterPro:IPR011651 InterPro:IPR018097 InterPro:IPR026219
Pfam:PF00008 Pfam:PF01414 Pfam:PF07645 Pfam:PF07657 PRINTS:PR02059
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51051 SMART:SM00051
SMART:SM00179 SMART:SM00181 SMART:SM00214 InterPro:IPR000152
Reactome:REACT_111102 GO:GO:0005576 GO:GO:0030216 GO:GO:0007399
GO:GO:0005887 GO:GO:0005198 GO:GO:0045944 GO:GO:0045177
GO:GO:0045665 GO:GO:0005509 GO:GO:0005112 GO:GO:0045747
GO:GO:0001525 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
GO:GO:0030334 PROSITE:PS01186 GO:GO:0007220 GO:GO:0030097
GO:GO:0045599 eggNOG:NOG12793 PROSITE:PS00010 GO:GO:0008083
GO:GO:0035909 GO:GO:0072017 GO:GO:0045445 GO:GO:0001709
GO:GO:0032495 GO:GO:0042491 GO:GO:0060411 GO:GO:0061156
Orphanet:3303 GO:GO:0002011 GO:GO:0072070 GO:GO:0097150
GO:GO:0061314 GO:GO:0045446 GO:GO:0045639 MIM:187500 GO:GO:0003215
GO:GO:0061309 GO:GO:2000737 GO:GO:0003184 HOGENOM:HOG000113124
HOVERGEN:HBG031645 KO:K06052 OrthoDB:EOG4H729Q EMBL:AF003837
EMBL:U73936 EMBL:AF028593 EMBL:U61276 EMBL:AL035456 EMBL:BC126205
EMBL:BC126207 EMBL:U77720 IPI:IPI00099650 RefSeq:NP_000205.1
UniGene:Hs.224012 UniGene:Hs.626544 PDB:2KB9 PDB:2VJ2 PDBsum:2KB9
PDBsum:2VJ2 DisProt:DP00418 ProteinModelPortal:P78504 SMR:P78504
DIP:DIP-46371N IntAct:P78504 STRING:P78504 PhosphoSite:P78504
DMDM:20455033 PaxDb:P78504 PeptideAtlas:P78504 PRIDE:P78504
DNASU:182 Ensembl:ENST00000254958 GeneID:182 KEGG:hsa:182
UCSC:uc002wnw.2 CTD:182 GeneCards:GC20M010618 HGNC:HGNC:6188
HPA:CAB010343 HPA:HPA021555 MIM:118450 MIM:601920
neXtProt:NX_P78504 Orphanet:261600 Orphanet:261619 PharmGKB:PA29986
InParanoid:P78504 OMA:IHVAISA ChiTaRS:JAG1 EvolutionaryTrace:P78504
GenomeRNAi:182 NextBio:744 ArrayExpress:P78504 Bgee:P78504
CleanEx:HS_JAG1 Genevestigator:P78504 GermOnline:ENSG00000101384
GO:GO:0061444 Uniprot:P78504
Length = 1218
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 47/161 (29%), Positives = 64/161 (39%)
Query: 195 CDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGV 254
C P+ C D C C G+ + +C+P GCV G+C+EP +C C+ + G
Sbjct: 238 CSPKHGSCKLPGD---CRCQYGW-QGLYCDKCIP--HPGCVHGICNEPWQCLCETNWGGQ 291
Query: 255 NCSIQCQ-CNGHADC--------AGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDN-G 304
C C H C GPDK C C GP C+ E + DP N G
Sbjct: 292 LCDKDLNYCGTHQPCLNGGTCSNTGPDKYQ-C-SCPEGYSGPNCEIAEHACLSDPCHNRG 349
Query: 305 ECVPCS-----EYCNGHTGLCINASLASL-PFSPESGGTSE 339
C S E G TG + ++ P + GGT +
Sbjct: 350 SCKETSLGFECECSPGWTGPTCSTNIDDCSPNNCSHGGTCQ 390
Score = 130 (50.8 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 60/202 (29%), Positives = 77/202 (38%)
Query: 188 CLNDHHTCDPQS----EQCVDLADGFECVCG---RGYNKSEEGGECV--P-VCSQGCVRG 237
C + C P + C DL +GF+CVC G + EC P V ++ C
Sbjct: 371 CSTNIDDCSPNNCSHGGTCQDLVNGFKCVCPPQWTGKTCQLDANECEAKPCVNAKSCKNL 430
Query: 238 VCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYV 297
+ S C C G++G NC I DC G + D C + G +C C P Y
Sbjct: 431 IASY--YCDCLPGWMGQNCDININ-----DCLGQCQNDAS--CRDLVNGYRCI-CPPGYA 480
Query: 298 GD--PRDNGECV--PCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRAR 353
GD RD EC PC GH IN P + SG +L E P
Sbjct: 481 GDHCERDIDECASNPCLN--GGHCQNEINRFQCLCP-TGFSGNLCQLDIDYCE-PNPCQN 536
Query: 354 CMHCGNHTTGP--KCEDCVEGK 373
C N + KC + EGK
Sbjct: 537 GAQCYNRASDYFCKCPEDYEGK 558
>UNIPROTKB|E7EUU1 [details] [associations]
symbol:LTBP4 "Latent-transforming growth factor
beta-binding protein 4" species:9606 "Homo sapiens" [GO:0005509
"calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
PROSITE:PS00010 Gene3D:3.90.290.10 InterPro:IPR017878 Pfam:PF00683
SUPFAM:SSF57581 PROSITE:PS51364 EMBL:AC010412 IPI:IPI00783492
HGNC:HGNC:6717 ChiTaRS:LTBP4 ProteinModelPortal:E7EUU1 PRIDE:E7EUU1
Ensembl:ENST00000396819 ArrayExpress:E7EUU1 Bgee:E7EUU1
Uniprot:E7EUU1
Length = 1556
Score = 138 (53.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 44/143 (30%), Positives = 59/143 (41%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG--CVRG 237
C NECL C P E C++ F C C GY G C+ V CS+ C G
Sbjct: 809 CADVNECLEGDF-CFPHGE-CLNTDGSFACTCAPGYRPGPRGASCLDVDECSEEDLCQSG 866
Query: 238 VCSEPD---KCQCDFGY-VGVNCSIQCQCNGHADCA--GPDKLDVCLRCHNHTKGPQCDK 291
+C+ D +C C G+ G + + C +C GP L RC N +C +
Sbjct: 867 ICTNTDGSFECICPPGHRAGPDLA---SCLDVDECRERGP-ALCGSQRCENSPGSYRCVR 922
Query: 292 -CEPLYVGDPRDNGECVP-CSEY 312
C+P Y P + V C EY
Sbjct: 923 DCDPGYHAGPEGTCDDVDECQEY 945
Score = 125 (49.1 bits), Expect = 0.00034, P = 0.00034
Identities = 41/152 (26%), Positives = 55/152 (36%)
Query: 186 NECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG---CVRGVCS 240
+EC + C P +C + A F C C G+ G C V C++ C G C
Sbjct: 645 DECAQEPPPCGPG--RCDNTAGSFHCACPAGFRSRGPGAPCQDVDECARSPPPCTYGRCE 702
Query: 241 EPD---KCQCDFGY----VGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCE 293
+ +C C G+ G C +C H C G + C N QC C
Sbjct: 703 NTEGSFQCVCPMGFQPNTAGSECEDVDECENHLACPGQE-------CVNSPGSFQCRTCP 755
Query: 294 P---LYVGDPRDNGECVPCSEYCNGHTGLCIN 322
L+ G D EC + C H G C N
Sbjct: 756 SGHHLHRGRCTDVDECSSGAPPCGPH-GHCTN 786
>UNIPROTKB|F1M7Y4 [details] [associations]
symbol:Notch1 "Neurogenic locus notch homolog protein 1"
species:10116 "Rattus norvegicus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0050793 "regulation of
developmental process" evidence=IEA] InterPro:IPR002110
InterPro:IPR000742 InterPro:IPR000800 InterPro:IPR001881
InterPro:IPR008297 InterPro:IPR010660 InterPro:IPR018097
InterPro:IPR022362 Pfam:PF00008 Pfam:PF00066 Pfam:PF06816
Pfam:PF07645 PIRSF:PIRSF002279 PRINTS:PR01452 PRINTS:PR01984
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258
SMART:SM00004 SMART:SM00179 SMART:SM00181 SMART:SM00248
InterPro:IPR000152 RGD:3187 GO:GO:0016021 GO:GO:0030154
GO:GO:0006355 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0007219 GO:GO:0005509
GO:GO:0004872 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
PROSITE:PS00010 GO:GO:0050793 Pfam:PF12661 SUPFAM:SSF90193
InterPro:IPR024600 Pfam:PF11936 IPI:IPI00197189
Ensembl:ENSRNOT00000019137 ArrayExpress:F1M7Y4 Uniprot:F1M7Y4
Length = 2208
Score = 145 (56.1 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 50/162 (30%), Positives = 70/162 (43%)
Query: 201 QCVDLADGFECVCGRGYNKSE---EGGECVP-VCSQG-CVRGVCSEPDKCQCDFGYVGVN 255
+C+D + + CVC GY + + EC P C G C GV + C C GY G +
Sbjct: 522 KCLDGPNTYTCVCTEGYTGTHCEVDIDECDPDPCHYGLCKDGVATFT--CLCQPGYTGHH 579
Query: 256 CSI---QCQ---CNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPC 309
C +C C C D +CL C T GP C+ +P D+G C+
Sbjct: 580 CETNINECHSQPCRHGGTCQDRDNYYLCL-CLKGTTGPNCEINLDDCASNPCDSGTCLDK 638
Query: 310 SE-Y---CN-GHTGLCINASLASLPFSP-ESGGTSE--LAAF 343
+ Y C G+TG N ++ SP +GGT E +A F
Sbjct: 639 IDGYECACEPGYTGSMCNVNIDECAGSPCHNGGTCEDGIAGF 680
Score = 130 (50.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 47/141 (33%), Positives = 58/141 (41%)
Query: 188 CLNDHHTCDPQSEQ----CVDLADGFECVCGRGY---NKSEEGGECVPVCSQGCVRG-VC 239
C ++ C P Q C D GF C C GY N SEE EC+ SQ C G C
Sbjct: 1065 CEDEVDECSPNPCQNGATCTDYLGGFSCKCVAGYHGSNCSEEINECL---SQPCQNGGTC 1121
Query: 240 ---SEPDKCQCDFGYVGVNCSIQCQ-CNGHADCAGPDKLDVCLR---CHNHTKGPQCDKC 292
+ KC C G GV+C I C+ D A + C C + G C C
Sbjct: 1122 IDLTNTYKCSCPRGTQGVHCEINVDDCHPPLDPAS--RSPKCFNNGTCVDQVGGYTCT-C 1178
Query: 293 EPLYVGD--PRDNGECV--PC 309
P +VG+ D EC+ PC
Sbjct: 1179 PPGFVGERCEGDVNECLSNPC 1199
Score = 124 (48.7 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 45/136 (33%), Positives = 63/136 (46%)
Query: 181 KCPPE-NECLNDHHTCDPQSEQ-CVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGV 238
+C + NECL++ CDP+ Q CV + F C C G+ G C V + GC RG
Sbjct: 1186 RCEGDVNECLSN--PCDPRGTQNCVQRVNDFHCECRAGHT----GRRCESVIN-GC-RG- 1236
Query: 239 CSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCD--KCEPLY 296
+P C+ + G V +++C NG +GP + CL C GP+C P
Sbjct: 1237 --KP--CR-NGGVCAVASNLRC-LNGGTCISGP-RSPTCL-CLGSFTGPECQFPASSPCV 1288
Query: 297 VGDPRDN-GECVPCSE 311
+P N G C P SE
Sbjct: 1289 GSNPCYNQGTCEPTSE 1304
Score = 59 (25.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 24/102 (23%), Positives = 38/102 (37%)
Query: 32 IKLKTGSSCPLRCDQ--RTDCQD--CLTSSGG-----EGGWHECRWSSMLNECI-SPSYE 81
+K TG +C + D C CL G E G+ + ++EC SP +
Sbjct: 610 LKGTTGPNCEINLDDCASNPCDSGTCLDKIDGYECACEPGYTGSMCNVNIDECAGSPCHN 669
Query: 82 ALYCAGGVCGLVLGPHQAPQCPRSCSAYTQCST--CLRHAHC 121
C G+ G + P S +C++ C+ H C
Sbjct: 670 GGTCEDGIAGFTCRCPEGYHDPTCLSEVNECNSNPCI-HGAC 710
Score = 58 (25.5 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 25/95 (26%), Positives = 36/95 (37%)
Query: 36 TGSSCPLRCDQRTD--CQD---CLTSSGG-----EGGWHECRWSSMLNECISPSYEALYC 85
TGS C D+ + CQ+ C GG G+H S +NEC+S +
Sbjct: 1061 TGSYCEDEVDECSPNPCQNGATCTDYLGGFSCKCVAGYHGSNCSEEINECLSQPCQN--- 1117
Query: 86 AGGVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAH 120
GG C + ++ CPR C + H
Sbjct: 1118 -GGTCIDLTNTYKC-SCPRGTQG-VHCEINVDDCH 1149
Score = 47 (21.6 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 29/112 (25%), Positives = 40/112 (35%)
Query: 36 TGSSCPLRCDQ--RTDCQDCLTSSGGEGGWHECRWSSMLNE--CISPSYEALY--CAGGV 89
TGS C + D+ + C + T G G+ CR ++ C+S E C G
Sbjct: 651 TGSMCNVNIDECAGSPCHNGGTCEDGIAGF-TCRCPEGYHDPTCLSEVNECNSNPCIHGA 709
Query: 90 CGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHCGWCA---LQRDTTGGMGVCT 138
C L ++ C S T C C +D T G VCT
Sbjct: 710 CRDGLNGYKC-DCAPGWSG-TNCDINNNECESNPCVNGGTCKDMTSGY-VCT 758
Score = 41 (19.5 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 74 ECIS-PSYEALYC 85
+CI P YE +YC
Sbjct: 455 QCICMPGYEGVYC 467
>FB|FBgn0000463 [details] [associations]
symbol:Dl "Delta" species:7227 "Drosophila melanogaster"
[GO:0005112 "Notch binding" evidence=NAS;IDA;TAS;IPI] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0007398 "ectoderm development"
evidence=NAS;TAS] [GO:0007498 "mesoderm development" evidence=IMP]
[GO:0007219 "Notch signaling pathway" evidence=IGI;IMP;NAS;TAS]
[GO:0007422 "peripheral nervous system development"
evidence=IMP;TAS] [GO:0007475 "apposition of dorsal and ventral
imaginal disc-derived wing surfaces" evidence=IMP] [GO:0031410
"cytoplasmic vesicle" evidence=IDA] [GO:0005912 "adherens junction"
evidence=IDA] [GO:0030707 "ovarian follicle cell development"
evidence=IMP;TAS] [GO:0001708 "cell fate specification"
evidence=TAS] [GO:0036011 "imaginal disc-derived leg segmentation"
evidence=IMP] [GO:0007417 "central nervous system development"
evidence=NAS] [GO:0016021 "integral to membrane"
evidence=IEA;NAS;TAS] [GO:0007424 "open tracheal system
development" evidence=NAS] [GO:0035155 "negative regulation of
terminal cell fate specification, open tracheal system"
evidence=NAS] [GO:0035157 "negative regulation of fusion cell fate
specification" evidence=NAS] [GO:0048749 "compound eye development"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=NAS] [GO:0007460 "R8 cell fate commitment" evidence=TAS]
[GO:0007155 "cell adhesion" evidence=TAS] [GO:0048800 "antennal
morphogenesis" evidence=IMP] [GO:0007480 "imaginal disc-derived leg
morphogenesis" evidence=IMP] [GO:0048477 "oogenesis"
evidence=IMP;TAS] [GO:0007451 "dorsal/ventral lineage restriction,
imaginal disc" evidence=TAS] [GO:0045465 "R8 cell differentiation"
evidence=NAS] [GO:0045468 "regulation of R8 cell spacing in
compound eye" evidence=NAS] [GO:0046667 "compound eye retinal cell
programmed cell death" evidence=TAS] [GO:0016318 "ommatidial
rotation" evidence=NAS] [GO:0046331 "lateral inhibition"
evidence=IMP;NAS;TAS] [GO:0042067 "establishment of ommatidial
planar polarity" evidence=TAS] [GO:0042676 "compound eye cone cell
fate commitment" evidence=TAS] [GO:0001736 "establishment of planar
polarity" evidence=NAS] [GO:0007464 "R3/R4 cell fate commitment"
evidence=NAS] [GO:0007474 "imaginal disc-derived wing vein
specification" evidence=NAS] [GO:0007419 "ventral cord development"
evidence=NAS] [GO:0005102 "receptor binding" evidence=NAS]
[GO:0007314 "oocyte anterior/posterior axis specification"
evidence=TAS] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0030720 "oocyte localization involved in
germarium-derived egg chamber formation" evidence=IMP] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0008356 "asymmetric cell
division" evidence=TAS] [GO:0008586 "imaginal disc-derived wing
vein morphogenesis" evidence=TAS] [GO:0016330 "second mitotic wave
involved in compound eye morphogenesis" evidence=IMP] [GO:0045931
"positive regulation of mitotic cell cycle" evidence=IMP]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0048190 "wing disc dorsal/ventral
pattern formation" evidence=IMP] [GO:0007015 "actin filament
organization" evidence=IMP] [GO:0007423 "sensory organ development"
evidence=IMP] [GO:0008407 "chaeta morphogenesis" evidence=IMP]
[GO:0050768 "negative regulation of neurogenesis" evidence=IMP]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0008347 "glial cell migration" evidence=IMP] [GO:0035003
"subapical complex" evidence=IDA] [GO:0030139 "endocytic vesicle"
evidence=IDA] [GO:0030718 "germ-line stem cell maintenance"
evidence=IMP] [GO:0048863 "stem cell differentiation" evidence=IMP]
[GO:0009986 "cell surface" evidence=IDA] Reactome:REACT_97910
InterPro:IPR000742 InterPro:IPR001774 InterPro:IPR001881
InterPro:IPR011651 InterPro:IPR018097 Pfam:PF00008 Pfam:PF01414
Pfam:PF07645 Pfam:PF07657 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51051 SMART:SM00051 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 EMBL:AE014297 GO:GO:0016021 GO:GO:0001708
GO:GO:0048190 GO:GO:0009986 GO:GO:0007015 GO:GO:0007498
GO:GO:0045931 GO:GO:0008284 GO:GO:0007474 GO:GO:0007464
GO:GO:0007419 GO:GO:0007155 GO:GO:0007219 GO:GO:0007422
GO:GO:0005509 GO:GO:0005112 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0007298 GO:GO:0005912 GO:GO:0030139 PROSITE:PS01186
GO:GO:0046331 PROSITE:PS00010 GO:GO:0007398 GO:GO:0008356
GO:GO:0030718 GO:GO:0007451 GO:GO:0036011 GO:GO:0050768
GO:GO:0046667 GO:GO:0030720 GO:GO:0008347 GO:GO:0030713
GO:GO:0008407 GO:GO:0007475 GO:GO:0016330 GO:GO:0007314
GO:GO:0007424 GO:GO:0035003 GO:GO:0016318
GeneTree:ENSGT00690000101660 eggNOG:NOG249767 KO:K06051 EMBL:X06289
EMBL:Y00222 EMBL:AY437145 EMBL:AY437140 EMBL:AY437141 EMBL:AY437142
EMBL:AY437143 EMBL:AY437144 EMBL:AY437151 EMBL:AY437146
EMBL:AY437147 EMBL:AY437148 EMBL:AY437149 EMBL:AY437150
EMBL:AY437157 EMBL:AY437152 EMBL:AY437153 EMBL:AY437154
EMBL:AY437155 EMBL:AY437156 EMBL:AY437163 EMBL:AY437158
EMBL:AY437159 EMBL:AY437160 EMBL:AY437161 EMBL:AY437162
EMBL:AY437169 EMBL:AY437164 EMBL:AY437165 EMBL:AY437166
EMBL:AY437167 EMBL:AY437168 EMBL:AY437175 EMBL:AY437170
EMBL:AY437171 EMBL:AY437172 EMBL:AY437173 EMBL:AY437174
EMBL:AY437181 EMBL:AY437176 EMBL:AY437177 EMBL:AY437178
EMBL:AY437179 EMBL:AY437180 EMBL:AY437187 EMBL:AY437182
EMBL:AY437183 EMBL:AY437184 EMBL:AY437185 EMBL:AY437186
EMBL:AY437193 EMBL:AY437188 EMBL:AY437189 EMBL:AY437190
EMBL:AY437191 EMBL:AY437192 EMBL:AY437199 EMBL:AY437194
EMBL:AY437195 EMBL:AY437196 EMBL:AY437197 EMBL:AY437198
EMBL:AY437205 EMBL:AY437200 EMBL:AY437201 EMBL:AY437202
EMBL:AY437203 EMBL:AY437204 EMBL:AY437211 EMBL:AY437206
EMBL:AY437207 EMBL:AY437208 EMBL:AY437209 EMBL:AY437210
EMBL:AY437217 EMBL:AY437212 EMBL:AY437213 EMBL:AY437214
EMBL:AY437215 EMBL:AY437216 EMBL:AY437223 EMBL:AY437218
EMBL:AY437219 EMBL:AY437220 EMBL:AY437221 EMBL:AY437222
EMBL:AY437229 EMBL:AY437224 EMBL:AY437225 EMBL:AY437226
EMBL:AY437227 EMBL:AY437228 EMBL:AY437235 EMBL:AY437230
EMBL:AY437231 EMBL:AY437232 EMBL:AY437233 EMBL:AY437234
EMBL:AY438104 EMBL:AY438105 EMBL:AY438106 EMBL:AY438107
EMBL:AY438108 EMBL:AY438109 EMBL:AY438110 EMBL:AY438111
EMBL:AY438112 EMBL:AY438113 EMBL:AY438114 EMBL:AY438115
EMBL:AY438116 EMBL:AY438117 EMBL:AY438118 EMBL:AY438119
EMBL:AY438120 EMBL:AY438121 EMBL:AY438122 EMBL:AY438123
EMBL:AY438124 EMBL:AY438125 EMBL:AY438126 EMBL:AY438127
EMBL:AY438128 EMBL:AY438129 EMBL:AY438130 EMBL:AY438131
EMBL:AY438132 EMBL:AY438133 EMBL:AY438134 EMBL:AY438135
EMBL:AY438136 EMBL:AY438137 EMBL:AY438138 EMBL:AY438139
EMBL:AY438140 EMBL:AY438141 EMBL:AY438147 EMBL:AY438148
EMBL:AY438149 EMBL:AY438150 EMBL:AY438151 EMBL:AY438152
EMBL:AY438153 EMBL:AY438154 EMBL:AY438155 EMBL:AY438156
EMBL:AY438157 EMBL:AY438158 EMBL:AY438159 EMBL:AY438160
EMBL:AY438161 EMBL:AY438162 EMBL:AY438163 EMBL:AY438164
EMBL:AY438165 EMBL:AY438166 EMBL:AY438167 EMBL:AY438168
EMBL:AY438169 EMBL:AY438170 EMBL:AY438171 EMBL:AY438172
EMBL:AY438173 EMBL:AY438174 EMBL:AY438175 EMBL:AY438176
EMBL:AY438177 EMBL:AY438178 EMBL:AY438179 EMBL:AY438180
EMBL:AY438181 EMBL:AY438182 EMBL:AY438183 EMBL:AY438184
EMBL:AY438185 EMBL:AY438186 EMBL:AY438187 EMBL:AY438188
EMBL:AY438189 EMBL:AY438190 EMBL:AY438191 EMBL:AY438192
EMBL:AY438193 EMBL:AY438194 EMBL:AY438195 EMBL:AY438196
EMBL:AY438197 EMBL:AY438198 EMBL:AY438199 EMBL:AY438200
EMBL:AY438201 EMBL:AY438202 EMBL:BK004004 EMBL:BT003267
EMBL:AY061269 EMBL:X05140 PIR:A31246 PIR:A43564 PIR:S00670
PIR:S19087 RefSeq:NP_001247193.1 RefSeq:NP_477264.1
RefSeq:NP_732412.1 UniGene:Dm.7687 ProteinModelPortal:P10041
SMR:P10041 DIP:DIP-22726N IntAct:P10041 MINT:MINT-773349
STRING:P10041 EnsemblMetazoa:FBtr0083739 EnsemblMetazoa:FBtr0083740
EnsemblMetazoa:FBtr0304658 GeneID:42313 KEGG:dme:Dmel_CG3619
FlyBase:FBgn0000463 InParanoid:P10041 OMA:LIVEAWH OrthoDB:EOG41ZCRW
ChiTaRS:Dl GenomeRNAi:42313 NextBio:828182 PMAP-CutDB:P10041
Bgee:P10041 GermOnline:CG3619 GO:GO:0048800 GO:GO:0042676
GO:GO:0035157 GO:GO:0035155 GO:GO:0007460 GO:GO:0045468
Uniprot:P10041
Length = 833
Score = 135 (52.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 60/206 (29%), Positives = 92/206 (44%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGEC-VPVCSQGCVRGVCS 240
C P ++ H TC SE G E +C G+ +G C +P C++GC G C
Sbjct: 197 CRPRDDSFG-HSTC---SET------G-EIICLTGW----QGDYCHIPKCAKGCEHGHCD 241
Query: 241 EPDKCQCDFGYVGVNCS---IQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYV 297
+P++C C G+ G C+ ++ C H C P C+ C+ G C++ + Y
Sbjct: 242 KPNQCVCQLGWKGALCNECVLEPNCI-HGTCNKPW---TCI-CNEGWGGLYCNQ-DLNYC 295
Query: 298 GDPR---DNGECVPCSE--Y-CN---GHTGL-CINASLA-SLPFSP-ESGGTSELAAFLD 345
+ R + G C E Y C G++G C N + +P ++GGT +D
Sbjct: 296 TNHRPCKNGGTCFNTGEGLYTCKCAPGYSGDDCENEIYSCDADVNPCQNGGTC-----ID 350
Query: 346 EGPT-TRARCMHCGNHTTGPKCEDCV 370
E T T +C HC N +G CE+ V
Sbjct: 351 EPHTKTGYKC-HCANGWSGKMCEEKV 375
>UNIPROTKB|E7ENG9 [details] [associations]
symbol:LTBP4 "Latent-transforming growth factor
beta-binding protein 4" species:9606 "Homo sapiens" [GO:0005509
"calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
PROSITE:PS00010 Gene3D:3.90.290.10 InterPro:IPR017878 Pfam:PF00683
SUPFAM:SSF57581 PROSITE:PS51364 EMBL:AC010412 IPI:IPI00792792
HGNC:HGNC:6717 ChiTaRS:LTBP4 ProteinModelPortal:E7ENG9 PRIDE:E7ENG9
Ensembl:ENST00000204005 PhylomeDB:E7ENG9 ArrayExpress:E7ENG9
Bgee:E7ENG9 Uniprot:E7ENG9
Length = 1586
Score = 138 (53.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 44/143 (30%), Positives = 59/143 (41%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG--CVRG 237
C NECL C P E C++ F C C GY G C+ V CS+ C G
Sbjct: 839 CADVNECLEGDF-CFPHGE-CLNTDGSFACTCAPGYRPGPRGASCLDVDECSEEDLCQSG 896
Query: 238 VCSEPD---KCQCDFGY-VGVNCSIQCQCNGHADCA--GPDKLDVCLRCHNHTKGPQCDK 291
+C+ D +C C G+ G + + C +C GP L RC N +C +
Sbjct: 897 ICTNTDGSFECICPPGHRAGPDLA---SCLDVDECRERGP-ALCGSQRCENSPGSYRCVR 952
Query: 292 -CEPLYVGDPRDNGECVP-CSEY 312
C+P Y P + V C EY
Sbjct: 953 DCDPGYHAGPEGTCDDVDECQEY 975
Score = 125 (49.1 bits), Expect = 0.00035, P = 0.00035
Identities = 41/152 (26%), Positives = 55/152 (36%)
Query: 186 NECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG---CVRGVCS 240
+EC + C P +C + A F C C G+ G C V C++ C G C
Sbjct: 675 DECAQEPPPCGPG--RCDNTAGSFHCACPAGFRSRGPGAPCQDVDECARSPPPCTYGRCE 732
Query: 241 EPD---KCQCDFGY----VGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCE 293
+ +C C G+ G C +C H C G + C N QC C
Sbjct: 733 NTEGSFQCVCPMGFQPNTAGSECEDVDECENHLACPGQE-------CVNSPGSFQCRTCP 785
Query: 294 P---LYVGDPRDNGECVPCSEYCNGHTGLCIN 322
L+ G D EC + C H G C N
Sbjct: 786 SGHHLHRGRCTDVDECSSGAPPCGPH-GHCTN 816
>MGI|MGI:95489 [details] [associations]
symbol:Fbn1 "fibrillin 1" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=ISO] [GO:0001527
"microfibril" evidence=ISO;TAS] [GO:0001822 "kidney development"
evidence=ISO] [GO:0005201 "extracellular matrix structural
constituent" evidence=ISO] [GO:0005509 "calcium ion binding"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISO] [GO:0005604
"basement membrane" evidence=ISO] [GO:0005615 "extracellular space"
evidence=ISO] [GO:0007507 "heart development" evidence=ISO]
[GO:0031012 "extracellular matrix" evidence=ISO;IDA] [GO:0035582
"sequestering of BMP in extracellular matrix" evidence=IMP]
[GO:0035583 "sequestering of TGFbeta in extracellular matrix"
evidence=IMP] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR011398 InterPro:IPR018097 Pfam:PF07645
PIRSF:PIRSF036312 PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 MGI:MGI:95489 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186 eggNOG:NOG12793
PROSITE:PS00010 GO:GO:0001527 InterPro:IPR009030 SUPFAM:SSF57184
InterPro:IPR026823 Pfam:PF12662 GO:GO:0005201 GO:GO:0035582
HOVERGEN:HBG005643 Gene3D:3.90.290.10 InterPro:IPR017878
PANTHER:PTHR24039:SF0 Pfam:PF00683 SUPFAM:SSF57581 PROSITE:PS51364
OrthoDB:EOG45TCM7 GO:GO:0035583 EMBL:L29454 EMBL:U22493
IPI:IPI00122438 PIR:A55624 UniGene:Mm.271644
ProteinModelPortal:Q61554 SMR:Q61554 STRING:Q61554
PhosphoSite:Q61554 PaxDb:Q61554 PRIDE:Q61554 InParanoid:Q61554
CleanEx:MM_FBN1 Genevestigator:Q61554 GermOnline:ENSMUSG00000027204
Uniprot:Q61554
Length = 2871
Score = 149 (57.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 48/162 (29%), Positives = 73/162 (45%)
Query: 180 VKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG---C 234
+KC +EC N H C Q C + + C+C GY + +G C + CS+ C
Sbjct: 1359 IKCTDLDECSNGTHMCS-QHADCKNTMGSYRCLCKDGY--TGDGFTCTDLDECSENLNLC 1415
Query: 235 VRGVC-SEPD--KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCL--RCHNHTKGPQC 289
G C + P +C+CD G+V C+ +C+ P+ +C+ CHN +C
Sbjct: 1416 GNGQCLNAPGGYRCECDMGFVPSADGKACE--DIDECSLPN---ICVFGTCHNLPGLFRC 1470
Query: 290 DKCEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFS 331
+ CE Y D R G C +E C T CI+ + + P S
Sbjct: 1471 E-CEIGYELD-RSGGNCTDVNE-CLDPT-TCISGNCVNTPGS 1508
Score = 139 (54.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 58/213 (27%), Positives = 87/213 (40%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG---CVR 236
C ++C ++ + CD QC ++ + C+C G+ SE+ CV V C C+
Sbjct: 1236 CTDIDQCEDNPNICD--GGQCTNIPGEYRCLCYDGFMASEDMKTCVDVNECDLNPNICLS 1293
Query: 237 GVCSEPDK---CQCDFGYVG----VNCSI--QCQCNGHADCAGPDKLDVCLRCHNHTKGP 287
G C C CD GY G C+ +C+ H +C + VC +T G
Sbjct: 1294 GTCENTKGSFICHCDMGYSGKKGKTGCTDINECEIGAH-NCG---RHAVC----TNTAGS 1345
Query: 288 -QCDKCEPLYVGDP---RDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSE--LA 341
+C C P ++GD D EC + C+ H C N ++ S + G T +
Sbjct: 1346 FKCS-CSPGWIGDGIKCTDLDECSNGTHMCSQHAD-CKN-TMGSYRCLCKDGYTGDGFTC 1402
Query: 342 AFLDEGPTTRARCMH--CGNHTTGPKCEDCVEG 372
LDE C + C N G +CE C G
Sbjct: 1403 TDLDECSENLNLCGNGQCLNAPGGYRCE-CDMG 1434
Score = 136 (52.9 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 58/205 (28%), Positives = 79/205 (38%)
Query: 186 NECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG---CVRGVCS 240
+EC H C ++ +CV+ + C+C GY G CV + C+Q C +C
Sbjct: 2404 DECKVIHDVC--RNGECVNDRGSYHCICKTGYTPDITGTSCVDLNECNQAPKPC-NFICK 2460
Query: 241 EPD---KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVC-LRCHNHTKGPQCDKCEPLY 296
+ +C C GY+ C+ +CA K C C N G C KC P +
Sbjct: 2461 NTEGSYQCSCPNGYILQEDGRSCK--DLDECA--TKQHNCQFLCVNTIGGFTC-KCPPGF 2515
Query: 297 VGDPR---DNGECVPCSEYCNGHTGLCINA--SLA---SLPFSPESGGTSELAAFLDEGP 348
DN EC C G G+C N S FS + G S +DE
Sbjct: 2516 TQHHTACIDNNECTSDINLC-GSKGICQNTPGSFTCECQRGFSLDQSGAS--CEDVDECE 2572
Query: 349 TTRARCMH-CGNHTTGPKCEDCVEG 372
RC H C N G +C C +G
Sbjct: 2573 GNH-RCQHGCQNIIGGYRCS-CPQG 2595
Score = 50 (22.7 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 21/87 (24%), Positives = 29/87 (33%)
Query: 37 GSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEAL--YCAGGVCGLVL 94
G C + Q+C + GEG W C + EA C G G+++
Sbjct: 2067 GGKCSSPKSRNHSKQECCCALKGEG------WGDPCELCPTEPDEAFRQICPFG-SGIIV 2119
Query: 95 GPHQAPQCPRSCSAYTQCSTCLRHAHC 121
GP + C C RH C
Sbjct: 2120 GPDDSAVDMDECKEPDVC----RHGQC 2142
Score = 46 (21.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 16/53 (30%), Positives = 20/53 (37%)
Query: 44 CDQRTDCQD------CLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVC 90
C Q DC++ CL G G C + L+EC S C G C
Sbjct: 1374 CSQHADCKNTMGSYRCLCKDGYTGDGFTC---TDLDEC---SENLNLCGNGQC 1420
Score = 41 (19.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 16/49 (32%), Positives = 17/49 (34%)
Query: 40 CPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGG 88
C L R C S G G EC + N S YE L C G
Sbjct: 967 CTLPIAGRHRMDACCCSVGAAWGTEECEECPLRN---SREYEEL-CPRG 1011
Score = 38 (18.4 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 19/75 (25%), Positives = 26/75 (34%)
Query: 40 CPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQA 99
CP+ R D + C G H+C M EC + Y +CG G +
Sbjct: 2232 CPVGYVLREDRRMCKDEDECAEGKHDCTEKQM--EC--KNLIGTYMC--ICGP--GYQRR 2283
Query: 100 PQCPRSCSAYTQCST 114
P C +C T
Sbjct: 2284 PD-GEGCIDENECQT 2297
>UNIPROTKB|G3V9M6 [details] [associations]
symbol:Fbn1 "Fibrillin 1, isoform CRA_a" species:10116
"Rattus norvegicus" [GO:0001501 "skeletal system development"
evidence=IEA] [GO:0001527 "microfibril" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0007507 "heart development" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR011398
InterPro:IPR018097 Pfam:PF07645 PIRSF:PIRSF036312 PROSITE:PS01187
PROSITE:PS50026 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:620908 GO:GO:0005578 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 PROSITE:PS00010 EMBL:CH473949
InterPro:IPR009030 SUPFAM:SSF57184 InterPro:IPR026823 Pfam:PF12662
GO:GO:0005201 GeneTree:ENSGT00700000104076 Gene3D:3.90.290.10
InterPro:IPR017878 PANTHER:PTHR24039:SF0 Pfam:PF00683
SUPFAM:SSF57581 PROSITE:PS51364 UniGene:Rn.12759
Ensembl:ENSRNOT00000056022 Uniprot:G3V9M6
Length = 2872
Score = 149 (57.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 48/162 (29%), Positives = 73/162 (45%)
Query: 180 VKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG---C 234
+KC +EC N H C Q C + + C+C GY + +G C + CS+ C
Sbjct: 1360 IKCTDLDECSNGTHMCS-QHADCKNTMGSYRCLCKDGY--TGDGFTCTDLDECSENLNLC 1416
Query: 235 VRGVC-SEPD--KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCL--RCHNHTKGPQC 289
G C + P +C+CD G+V C+ +C+ P+ +C+ CHN +C
Sbjct: 1417 GNGQCLNAPGGYRCECDMGFVPSADGKACEDIN--ECSLPN---ICVFGTCHNLPGLFRC 1471
Query: 290 DKCEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFS 331
+ CE Y D R G C +E C T CI+ + + P S
Sbjct: 1472 E-CEIGYELD-RSGGNCTDVNE-CLDPT-TCISGNCVNTPGS 1509
Score = 142 (55.0 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 59/213 (27%), Positives = 87/213 (40%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG---CVR 236
C +EC ++ + CD QC ++ + C+C G+ SE+ CV V C C+
Sbjct: 1237 CTDIDECEDNPNICD--GGQCTNIPGEYRCLCYDGFMASEDMKTCVDVNECDLNPNICLS 1294
Query: 237 GVCSEPDK---CQCDFGYVG----VNCSI--QCQCNGHADCAGPDKLDVCLRCHNHTKGP 287
G C C CD GY G C+ +C+ H +C + VC +T G
Sbjct: 1295 GTCENTKGSFICHCDMGYSGKKGKTGCTDINECEIGAH-NCG---RHAVC----TNTAGS 1346
Query: 288 -QCDKCEPLYVGDP---RDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSE--LA 341
+C C P ++GD D EC + C+ H C N ++ S + G T +
Sbjct: 1347 FKCS-CSPGWIGDGIKCTDLDECSNGTHMCSQHAD-CKN-TMGSYRCLCKDGYTGDGFTC 1403
Query: 342 AFLDEGPTTRARCMH--CGNHTTGPKCEDCVEG 372
LDE C + C N G +CE C G
Sbjct: 1404 TDLDECSENLNLCGNGQCLNAPGGYRCE-CDMG 1435
Score = 133 (51.9 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 58/205 (28%), Positives = 79/205 (38%)
Query: 186 NECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG---CVRGVCS 240
+EC H C ++ +CV+ + C+C GY G CV + C+Q C +C
Sbjct: 2405 DECKVIHDVC--RNGECVNDRGSYHCICKTGYTPDITGTACVDLNECNQAPKPC-NFICK 2461
Query: 241 EPD---KCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVC-LRCHNHTKGPQCDKCEPLY 296
+ +C C GY+ C+ +CA K C C N G C KC P +
Sbjct: 2462 NTEGSYQCSCPKGYILQEDGRSCK--DLDECA--TKQHNCQFLCVNTIGGFTC-KCPPGF 2516
Query: 297 VGDPR---DNGECVPCSEYCNGHTGLCINA--SLA---SLPFSPESGGTSELAAFLDEGP 348
DN EC C G G+C N S FS + G S +DE
Sbjct: 2517 TQHHTACIDNNECTSEINLC-GSKGVCQNTPGSFTCECQRGFSLDQSGAS--CEDVDECE 2573
Query: 349 TTRARCMH-CGNHTTGPKCEDCVEG 372
RC H C N G +C C +G
Sbjct: 2574 GNH-RCQHGCQNIIGGYRCS-CPQG 2596
Score = 47 (21.6 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 20/87 (22%), Positives = 29/87 (33%)
Query: 37 GSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEAL--YCAGGVCGLVL 94
G C + Q+C + GEG W C + EA C G G+++
Sbjct: 2068 GGKCSSPKSRNHSKQECCCALKGEG------WGDPCELCPTEPDEAFRQICPFG-SGIIV 2120
Query: 95 GPHQAPQCPRSCSAYTQCSTCLRHAHC 121
GP + C C +H C
Sbjct: 2121 GPDDSAVDMDECKEPDVC----KHGQC 2143
Score = 46 (21.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 16/53 (30%), Positives = 20/53 (37%)
Query: 44 CDQRTDCQD------CLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVC 90
C Q DC++ CL G G C + L+EC S C G C
Sbjct: 1375 CSQHADCKNTMGSYRCLCKDGYTGDGFTC---TDLDEC---SENLNLCGNGQC 1421
Score = 41 (19.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 16/49 (32%), Positives = 17/49 (34%)
Query: 40 CPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGG 88
C L R C S G G EC + N S YE L C G
Sbjct: 968 CTLPIAGRHRMDACCCSVGAAWGTEECEECPLRN---SREYEEL-CPRG 1012
>UNIPROTKB|E2RRE4 [details] [associations]
symbol:NTN5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 OMA:GGPFLLT
EMBL:AAEX03000816 Ensembl:ENSCAFT00000006331 Uniprot:E2RRE4
Length = 489
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 42/122 (34%), Positives = 50/122 (40%)
Query: 259 QCQCNGHAD-CAGPDKLDVCLRCHNHTKGPQCDKCEPLY------VGDPRDNGECVPCSE 311
+CQC+GHA CA + C RC +HT G C+ C P + P C+PCS
Sbjct: 156 RCQCHGHAARCAARARPPRC-RCRHHTTGLGCESCRPSHRDWPWRPATPWHPHPCLPCS- 213
Query: 312 YCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCV 370
CN H C N+ L L SGG E RC H HT G C C
Sbjct: 214 -CNQHARRCRFNSELFRLS-GGRSGGVCE-------------RCRH---HTAGRHCHYCQ 255
Query: 371 EG 372
G
Sbjct: 256 PG 257
>UNIPROTKB|Q8N2S1 [details] [associations]
symbol:LTBP4 "Latent-transforming growth factor
beta-binding protein 4" species:9606 "Homo sapiens" [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0005024 "transforming growth factor
beta-activated receptor activity" evidence=NAS] [GO:0006457
"protein folding" evidence=TAS] [GO:0017015 "regulation of
transforming growth factor beta receptor signaling pathway"
evidence=TAS] [GO:0001558 "regulation of cell growth" evidence=TAS]
[GO:0007275 "multicellular organismal development" evidence=TAS]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IDA]
[GO:0005178 "integrin binding" evidence=NAS] [GO:0005509 "calcium
ion binding" evidence=NAS] [GO:0030162 "regulation of proteolysis"
evidence=IDA] [GO:0030252 "growth hormone secretion" evidence=TAS]
[GO:0050431 "transforming growth factor beta binding" evidence=IDA]
[GO:0045595 "regulation of cell differentiation" evidence=TAS]
[GO:0005539 "glycosaminoglycan binding" evidence=NAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0031012 "extracellular matrix" evidence=IDA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179
SMART:SM00181 Reactome:REACT_118779 InterPro:IPR000152
GO:GO:0007275 GO:GO:0005615 GO:GO:0006457 GO:GO:0045595
GO:GO:0001558 GO:GO:0030162 GO:GO:0005578 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0005178 GO:GO:0005024
GO:GO:0007179 GO:GO:0050431 PROSITE:PS01186 PROSITE:PS00010
InterPro:IPR026823 Pfam:PF12662 GO:GO:0030252 GO:GO:0017015
GO:GO:0005539 Gene3D:3.90.290.10 InterPro:IPR017878 Pfam:PF00683
SUPFAM:SSF57581 PROSITE:PS51364 KO:K08023 HOGENOM:HOG000293153
HOVERGEN:HBG052370 EMBL:Y13622 EMBL:AF051344 EMBL:AF051345
EMBL:AK074499 EMBL:AC010412 IPI:IPI00395783 IPI:IPI00783492
IPI:IPI00792792 IPI:IPI00873371 RefSeq:NP_001036009.1
RefSeq:NP_001036010.1 RefSeq:NP_003564.2 UniGene:Hs.466766
HSSP:P22064 ProteinModelPortal:Q8N2S1 SMR:Q8N2S1 IntAct:Q8N2S1
MINT:MINT-2794871 STRING:Q8N2S1 PhosphoSite:Q8N2S1 DMDM:160410003
PaxDb:Q8N2S1 PRIDE:Q8N2S1 DNASU:8425 Ensembl:ENST00000308370
GeneID:8425 KEGG:hsa:8425 UCSC:uc002oog.1 UCSC:uc002ooh.1
UCSC:uc002ooi.1 UCSC:uc002ooj.1 CTD:8425 GeneCards:GC19P041099
HGNC:HGNC:6717 HPA:CAB015194 MIM:604710 MIM:613177
neXtProt:NX_Q8N2S1 Orphanet:221145 PharmGKB:PA30480
eggNOG:NOG261153 InParanoid:Q8N2S1 ChiTaRS:LTBP4 GenomeRNAi:8425
NextBio:31524 ArrayExpress:Q8N2S1 Bgee:Q8N2S1 CleanEx:HS_LTBP4
Genevestigator:Q8N2S1 Uniprot:Q8N2S1
Length = 1624
Score = 138 (53.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 44/143 (30%), Positives = 59/143 (41%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG--CVRG 237
C NECL C P E C++ F C C GY G C+ V CS+ C G
Sbjct: 876 CADVNECLEGDF-CFPHGE-CLNTDGSFACTCAPGYRPGPRGASCLDVDECSEEDLCQSG 933
Query: 238 VCSEPD---KCQCDFGY-VGVNCSIQCQCNGHADCA--GPDKLDVCLRCHNHTKGPQCDK 291
+C+ D +C C G+ G + + C +C GP L RC N +C +
Sbjct: 934 ICTNTDGSFECICPPGHRAGPDLA---SCLDVDECRERGP-ALCGSQRCENSPGSYRCVR 989
Query: 292 -CEPLYVGDPRDNGECVP-CSEY 312
C+P Y P + V C EY
Sbjct: 990 DCDPGYHAGPEGTCDDVDECQEY 1012
Score = 125 (49.1 bits), Expect = 0.00036, P = 0.00036
Identities = 41/152 (26%), Positives = 55/152 (36%)
Query: 186 NECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQG---CVRGVCS 240
+EC + C P +C + A F C C G+ G C V C++ C G C
Sbjct: 712 DECAQEPPPCGPG--RCDNTAGSFHCACPAGFRSRGPGAPCQDVDECARSPPPCTYGRCE 769
Query: 241 EPD---KCQCDFGY----VGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCE 293
+ +C C G+ G C +C H C G + C N QC C
Sbjct: 770 NTEGSFQCVCPMGFQPNTAGSECEDVDECENHLACPGQE-------CVNSPGSFQCRTCP 822
Query: 294 P---LYVGDPRDNGECVPCSEYCNGHTGLCIN 322
L+ G D EC + C H G C N
Sbjct: 823 SGHHLHRGRCTDVDECSSGAPPCGPH-GHCTN 853
>UNIPROTKB|P21783 [details] [associations]
symbol:notch1 "Neurogenic locus notch protein homolog"
species:8355 "Xenopus laevis" [GO:0005654 "nucleoplasm"
evidence=TAS] InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
InterPro:IPR022362 Pfam:PF00008 Pfam:PF00023 Pfam:PF06816
Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279 PRINTS:PR01452
PRINTS:PR01984 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088
PROSITE:PS50258 SMART:SM00004 SMART:SM00179 SMART:SM00181
SMART:SM00248 InterPro:IPR000152 GO:GO:0016021 GO:GO:0007399
GO:GO:0005654 GO:GO:0030154 GO:GO:0006355 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0007219 GO:GO:0005509 GO:GO:0004872 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 PROSITE:PS00010 GO:GO:0050793
Pfam:PF12661 SUPFAM:SSF90193 HOVERGEN:HBG052650 KO:K02599
InterPro:IPR024600 Pfam:PF11936 CTD:4851 EMBL:M33874 PIR:A35844
RefSeq:NP_001081074.1 UniGene:Xl.1057 ProteinModelPortal:P21783
SMR:P21783 GeneID:394367 KEGG:xla:394367 Xenbase:XB-GENE-865261
Uniprot:P21783
Length = 2524
Score = 145 (56.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 61/214 (28%), Positives = 81/214 (37%)
Query: 186 NECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKS---EEGGECVPVCSQGCVRGVCSEP 242
NEC D + C C D +GF CVC GY+ E EC S C+ G C +
Sbjct: 679 NEC--DSNPCR-NGGTCKDQINGFTCVCPDGYHDHMCLSEVNECN---SNPCIHGACHDG 732
Query: 243 D---KCQCDFGYVGVNCSI---QCQ---CNGHADCAGPDKLDVCLRCHNHTKGPQCDKCE 293
KC C+ G+ G NC I +C+ C C +C C GP C
Sbjct: 733 VNGYKCDCEAGWSGSNCDINNNECESNPCMNGGTCKDMTGAYICT-CKAGFSGPNCQTNI 791
Query: 294 PLYVGDP-RDNGECVP-CSEY-CN---GHTGLCINASLASLPFSP-ESGGTSELAAFLDE 346
+P ++G C+ + Y CN +TG A LA SP ++GG + E
Sbjct: 792 NECSSNPCLNHGTCIDDVAGYKCNCMLPYTGAICEAVLAPCAGSPCKNGGRCK------E 845
Query: 347 GPTTRARCMHCGNHTTGPKCEDCVEGKENRQSRN 380
C G CE + NR RN
Sbjct: 846 SEDFETFSCECPPGWQGQTCEIDMNECVNRPCRN 879
Score = 139 (54.0 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 60/214 (28%), Positives = 82/214 (38%)
Query: 193 HTCDPQSEQCVDLADGFECVCGRGYNKS---EEGGECVP-VCSQGCVRGVCSEPDKCQCD 248
H C S CVD + C C GY S E+ EC P C G C+C
Sbjct: 1113 HLCR-NSGMCVDTGNTHFCRCQAGYTGSYCEEQVDECSPNPCQNGATCTDYLGGYSCECV 1171
Query: 249 FGYVGVNCSIQC-QCNGHADCAGPDKLDVC----LRCHNHTKGPQC----DKCEPLYVG- 298
GY GVNCS + +C H G +D+ C T+G C D C P Y
Sbjct: 1172 AGYHGVNCSEEINECLSHPCQNGGTCIDLINTYKCSCPRGTQGVHCEINVDDCTPFYDSF 1231
Query: 299 --DPR--DNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSE-LAAFLDEGPTTRA- 352
+P+ +NG+C+ + G+ +C + G +E L+ D T
Sbjct: 1232 TLEPKCFNNGKCI---DRVGGYNCICPPGFVGERC----EGDVNECLSNPCDSRGTQNCI 1284
Query: 353 ------RCMHCGNHTTGPKCEDCVEGKENRQSRN 380
RC C TG +CE V+G + RN
Sbjct: 1285 QLVNDYRC-ECRQGFTGRRCESVVDGCKGMPCRN 1317
Score = 44 (20.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 74 ECIS-PSYEALYC 85
+CI P YE LYC
Sbjct: 474 QCICMPGYEGLYC 486
>UNIPROTKB|F1SB08 [details] [associations]
symbol:F1SB08 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050793 "regulation of developmental process"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
Pfam:PF00008 Pfam:PF00023 Pfam:PF00066 Pfam:PF06816 Pfam:PF07645
Pfam:PF07684 PIRSF:PIRSF002279 PRINTS:PR01452 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004
SMART:SM00179 SMART:SM00181 SMART:SM00248 InterPro:IPR000152
GO:GO:0016021 GO:GO:0007275 GO:GO:0030154 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0007219 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 PROSITE:PS00010 GO:GO:0050793
GeneTree:ENSGT00700000104305 SUPFAM:SSF90193 InterPro:IPR024600
Pfam:PF11936 InterPro:IPR022336 PRINTS:PR01985 OMA:VCMPGFT
EMBL:CU467688 Ensembl:ENSSSCT00000007349 Uniprot:F1SB08
Length = 2175
Score = 139 (54.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 59/204 (28%), Positives = 77/204 (37%)
Query: 188 CLNDHHTCDPQS----EQCVDLADGFECVCGRGYNKS---EEGGECV--PVCSQG-CVRG 237
C N+ C S CVD + F C+C G+ E EC P ++G CV G
Sbjct: 688 CENNIDECTESSCFNGGTCVDGLNSFSCLCPVGFTGPFCLHEINECNSHPCLNEGICVDG 747
Query: 238 VCSEPDKCQCDFGYVGVNCSIQ---CQ---CNGHADCAGPDKLDVCLRCHNHTKGPQCDK 291
+ + +C C GY G NC C C C CL C + G CD
Sbjct: 748 LGTY--RCICPLGYTGKNCQTLVNLCSRSPCKNKGTCVQEKAESRCL-CPSGWAGAYCDV 804
Query: 292 CEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTR 351
P + + VP C H+G+CINA + P S LDE +
Sbjct: 805 --PSVSCEVAASHRGVPVDRLCQ-HSGVCINAGNSHHCQCPLGYTGSYCEEQLDECSSNP 861
Query: 352 ARCMH---CGNHTTGPKCEDCVEG 372
C H C + G +CE CV G
Sbjct: 862 --CQHGATCRDFIGGYRCE-CVPG 882
Score = 130 (50.8 bits), Expect = 0.00014, P = 0.00014
Identities = 52/207 (25%), Positives = 86/207 (41%)
Query: 186 NECLNDHHTCDPQSEQCVDLADGFECVCGRG-YNKS--EEGGECVPVCSQGCVRGVCS-- 240
+EC ++ C + C++ +GF C+C G ++ S + EC+ S C+ G C+
Sbjct: 388 DECASN--PCR-KGATCINDVNGFRCMCPEGPHHPSCYSQVNECL---SNPCIHGNCTGG 441
Query: 241 -EPDKCQCDFGYVGVNCSI---QC---QCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCE 293
KC CD G+VG+NC + +C C C D L RC KG + C+
Sbjct: 442 LSGYKCLCDAGWVGINCEVDKNECLSDPCQNGGTC---DNLVNGYRC-TCKKGFKGHNCQ 497
Query: 294 PLYVGDPRDNGECV---PCSEYCNGHTGLCI---NASLASLPFSPESGGTSELAAFLDEG 347
+ + + N C+ C + +G+T C+ +P S E AA E
Sbjct: 498 -VNIDECASN-PCLNQGTCFDDISGYTCHCVLPYTGKNCQTVLAPCSPNPCENAAVCKEA 555
Query: 348 PTTRARCMHCGNHTTGPKC----EDCV 370
P + C G +C ++C+
Sbjct: 556 PNFESYTCLCAPGWQGQRCSVDIDECI 582
Score = 49 (22.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 20/68 (29%), Positives = 28/68 (41%)
Query: 36 TGSSCPLRCDQ--RTDCQD---CLTSSGG------EGGWHECRWSSMLNECIS-PSYEAL 83
TG C + D+ C+ C+ G EG H +S + NEC+S P
Sbjct: 379 TGQRCNIDIDECASNPCRKGATCINDVNGFRCMCPEGPHHPSCYSQV-NECLSNPCIHG- 436
Query: 84 YCAGGVCG 91
C GG+ G
Sbjct: 437 NCTGGLSG 444
>UNIPROTKB|Q8WWQ8 [details] [associations]
symbol:STAB2 "Stabilin-2" species:9606 "Homo sapiens"
[GO:0051636 "Gram-negative bacterial cell surface binding"
evidence=IDA] [GO:0006897 "endocytosis" evidence=ISS] [GO:0009897
"external side of plasma membrane" evidence=ISS] [GO:0005041
"low-density lipoprotein receptor activity" evidence=IDA]
[GO:0005044 "scavenger receptor activity" evidence=IDA] [GO:0005887
"integral to plasma membrane" evidence=IDA] [GO:0006898
"receptor-mediated endocytosis" evidence=TAS] [GO:0007155 "cell
adhesion" evidence=NAS] [GO:0051635 "bacterial cell surface
binding" evidence=IDA] [GO:0015035 "protein disulfide
oxidoreductase activity" evidence=NAS] [GO:0030169 "low-density
lipoprotein particle binding" evidence=IDA] [GO:0042742 "defense
response to bacterium" evidence=IDA] [GO:0001525 "angiogenesis"
evidence=NAS] [GO:0005540 "hyaluronic acid binding" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0005975
"carbohydrate metabolic process" evidence=TAS] [GO:0030203
"glycosaminoglycan metabolic process" evidence=TAS] [GO:0030212
"hyaluronan metabolic process" evidence=TAS] [GO:0030214
"hyaluronan catabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_111217 InterPro:IPR000538
InterPro:IPR000742 Pfam:PF00193 PROSITE:PS01241 PROSITE:PS50026
PROSITE:PS50963 SMART:SM00181 SMART:SM00445 Pfam:PF02469
InterPro:IPR000782 GO:GO:0005737 Reactome:REACT_116125
GO:GO:0005887 GO:GO:0009897 GO:GO:0044281 GO:GO:0005975
GO:GO:0042742 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0007155 GO:GO:0001525
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0015035
GO:GO:0030169 eggNOG:COG2335 Gene3D:2.30.180.10 SMART:SM00554
SUPFAM:SSF82153 PROSITE:PS50213 GO:GO:0030214 InterPro:IPR009030
SUPFAM:SSF57184 GO:GO:0051636 GO:GO:0005044 GO:GO:0005540
GO:GO:0005041 InterPro:IPR024731 Pfam:PF12947 Gene3D:2.40.155.10
InterPro:IPR023413 HOVERGEN:HBG079218 EMBL:AJ295695 EMBL:AB052958
EMBL:AY311388 EMBL:AK024503 EMBL:AK074051 EMBL:AK160380
EMBL:AY227444 EMBL:AF160476 IPI:IPI00292579 RefSeq:NP_060034.9
UniGene:Hs.408249 ProteinModelPortal:Q8WWQ8 SMR:Q8WWQ8
MINT:MINT-6542238 STRING:Q8WWQ8 PhosphoSite:Q8WWQ8 DMDM:145559531
PaxDb:Q8WWQ8 PRIDE:Q8WWQ8 Ensembl:ENST00000388887 GeneID:55576
KEGG:hsa:55576 UCSC:uc001tjw.3 CTD:55576 GeneCards:GC12P103981
HGNC:HGNC:18629 HPA:HPA026871 MIM:608561 neXtProt:NX_Q8WWQ8
PharmGKB:PA38611 InParanoid:Q8WWQ8 OMA:IPKCCKG OrthoDB:EOG4QNMV8
GenomeRNAi:55576 NextBio:60076 ArrayExpress:Q8WWQ8 Bgee:Q8WWQ8
CleanEx:HS_STAB2 Genevestigator:Q8WWQ8 GermOnline:ENSG00000136011
Uniprot:Q8WWQ8
Length = 2551
Score = 110 (43.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 35/121 (28%), Positives = 50/121 (41%)
Query: 201 QCVDLADGF-ECVCGRGYNKSEEGGECV-P-VCSQGC-VRGVCSEPDKCQCDFGYVG--V 254
QC D G +C+C G+ + V P VC+ C C E + C+C+ Y G +
Sbjct: 2019 QCDDGITGSGQCLCETGWTGPSCDTQAVLPAVCTPPCSAHATCKENNTCECNLDYEGDGI 2078
Query: 255 NCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCN 314
C++ C D G K+ RC C C+ Y GD E PC++ N
Sbjct: 2079 TCTVVDFCK--QDNGGCAKV---ARCSQKGTKVSCS-CQKGYKGDGHSCTEIDPCADGLN 2132
Query: 315 G 315
G
Sbjct: 2133 G 2133
Score = 96 (38.9 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 55/194 (28%), Positives = 78/194 (40%)
Query: 202 CVDLADGFE-CVCGRGYN--------KSEEGGECVPVCSQGCVRGVCSE-P--D-KCQCD 248
C+D +G C CG G++ + + G C CS CV G C++ P D C CD
Sbjct: 1362 CLDGVNGTGVCECGEGFSGTACETCTEGKYGIHCDQACS--CVHGRCNQGPLGDGSCDCD 1419
Query: 249 FGYVGVNC---SIQCQCNG--H--ADC-AGPDKLDVCLRCHN--HTKGPQC---DKCEPL 295
G+ GV+C + + CNG H A+C D C +C G C + CE +
Sbjct: 1420 VGWRGVHCDNATTEDNCNGTCHTSANCLTNSDGTASC-KCAAGFQGNGTICTAINACE-I 1477
Query: 296 YVGDPRDNGEC---VPCSEYCNGHTGLCINASLASLPFSP--ES-GGTSELAAFLDEGPT 349
G +C P C G + L +P E+ GG + A GP
Sbjct: 1478 SNGGCSAKADCKRTTPGRRVCTCKAGYT-GDGIVCLEINPCLENHGGCDKNAECTQTGPN 1536
Query: 350 TRARCMHCGNHTTG 363
+A C +C TG
Sbjct: 1537 -QAAC-NCLPAYTG 1548
Score = 81 (33.6 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 38/154 (24%), Positives = 50/154 (32%)
Query: 66 CRWSSMLNECISPS-YEALYCAGGVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHCGWC 124
C +S+ CI + YE G +C + P P CS +C H C
Sbjct: 843 CEYSNGTASCICKAGYEG---DGTLCS-EMDPCTG-LTPGGCSRNAECIKTGTGTHT--C 895
Query: 125 ALQRDTTGGMGVCTXXXXXXXXXXXXXXTCDILFYQTYPDQVIEVNNNDSFSWNYVKCPP 184
Q+ TG C+ Y P Q E F N + C P
Sbjct: 896 VCQQGWTGNGRDCSEINNCLLPSAGGCHDNASCLY-VGPGQN-ECECKKGFRGNGIDCEP 953
Query: 185 ENECLNDHHTCDPQSEQCVDLADG-FECVCGRGY 217
CL C P + C + G + CVC GY
Sbjct: 954 ITSCLEQTGKCHPLAS-CQSTSSGVWSCVCQEGY 986
>UNIPROTKB|A0JM12 [details] [associations]
symbol:megf10 "Multiple epidermal growth factor-like
domains protein 10" species:8364 "Xenopus (Silurana) tropicalis"
[GO:0014719 "satellite cell activation" evidence=ISS] [GO:0014816
"satellite cell differentiation" evidence=ISS] [GO:0014841
"satellite cell proliferation" evidence=ISS] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
GO:GO:0016021 GO:GO:0005886 GO:GO:0007155 GO:GO:0006909
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030239 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 GO:GO:0014816
Pfam:PF12661 GeneTree:ENSGT00690000101691 CTD:84466
HOVERGEN:HBG108333 OMA:FGCNLTC GO:GO:0014719 GO:GO:0014841
EMBL:BC125696 RefSeq:NP_001072726.1 UniGene:Str.46279
ProteinModelPortal:A0JM12 Ensembl:ENSXETT00000034579 GeneID:780183
KEGG:xtr:780183 Xenbase:XB-GENE-491974 Bgee:A0JM12 Uniprot:A0JM12
Length = 1114
Score = 136 (52.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 36/120 (30%), Positives = 54/120 (45%)
Query: 213 CGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQ-------CNGH 265
C G+ +S E CVP C+ CV G C P+ CQC+ G+ G NCS C C+
Sbjct: 93 CCPGFYESRE--MCVPHCADKCVHGRCIAPNTCQCEPGWGGPNCSSACDVDHWGPHCSSR 150
Query: 266 ADCAGP---DKLDVCLRCHNHTKGPQCD-KCEP-LYVGDPRDNGECVPCSEYCNGHTGLC 320
C + + C + KG +C+ +C+ Y D + +C + C+ TG C
Sbjct: 151 CQCKNGALCNPITGACHCSSGYKGWRCEERCDQGTYGNDCQQKCQCQNGAS-CDHVTGEC 209
Score = 124 (48.7 bits), Expect = 0.00030, P = 0.00030
Identities = 77/308 (25%), Positives = 103/308 (33%)
Query: 42 LRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECI-SPSYEALYCAGGVCGL-VLGPHQA 99
++CD++ C T S C M EC P LYC C L G
Sbjct: 361 MKCDKKCPCHLQYTQS--------CH--PMSGECACKPGRSGLYC-NETCSLGFYGEFCQ 409
Query: 100 PQCPRSCSAYTQCSTCLRHAHC--GWCALQRDTT---GGMGV-----CTXXXXXXXXXXX 149
C SC C + C G+ + T G GV C
Sbjct: 410 QIC--SCQNGADCDSVTGKCICAPGFTGVDCSTACPPGTYGVNCSSLCNCKNNAVCSPVD 467
Query: 150 XXXTCDILFYQTYPDQVIEVNNNDSFSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGF 209
TC ++ D I N SW + C +CLN C+P C A G+
Sbjct: 468 GSCTCKAGWHGV--DCSI---NCPRGSWG-LGCNLTCQCLNGG-ACNPLDGTCT-CAPGW 519
Query: 210 ECV-CGRGYNKSEEGGECVPVC----SQGC--VRGVCS-----EPDKCQ--CDFGYVGVN 255
+ C G C+ C + GC G C C C G+ G N
Sbjct: 520 RGLKCELPCQDGTYGMNCIERCDCSHADGCHPATGYCRCLAGWAGMHCDSVCPGGHWGPN 579
Query: 256 CSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDK-CEPLYVGDPRDNG--ECVPCSEY 312
CS+ C C A C+ PD +C C +G C + C P + G +CV +
Sbjct: 580 CSLSCDCKNGASCS-PDD-GIC-ECAPGYRGTTCQRICSPGFYGHRCSQACPQCVHSNGP 636
Query: 313 CNGHTGLC 320
C+ TG C
Sbjct: 637 CHHVTGQC 644
>UNIPROTKB|P80370 [details] [associations]
symbol:DLK1 "Protein delta homolog 1" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0009897
"external side of plasma membrane" evidence=IEA] [GO:0045746
"negative regulation of Notch signaling pathway" evidence=IEA]
[GO:0048706 "embryonic skeletal system development" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005615
"extracellular space" evidence=TAS] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0007219 "Notch signaling
pathway" evidence=TAS] InterPro:IPR000742 Pfam:PF00008
PROSITE:PS50026 SMART:SM00181 InterPro:IPR000152 GO:GO:0016021
GO:GO:0007275 Reactome:REACT_111102 GO:GO:0005615 GO:GO:0009897
GO:GO:0007219 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0009791
PROSITE:PS01186 PROSITE:PS00010 GO:GO:0048706 GO:GO:0045746
Pfam:PF12661 EMBL:Z12172 EMBL:U15979 EMBL:U15981 EMBL:X17544
EMBL:AL132711 EMBL:BC013197 IPI:IPI00160384 IPI:IPI00218210
PIR:S53716 PIR:S71548 RefSeq:NP_003827.3 UniGene:Hs.533717
ProteinModelPortal:P80370 SMR:P80370 STRING:P80370
PhosphoSite:P80370 DMDM:296439371 PaxDb:P80370 PRIDE:P80370
DNASU:8788 Ensembl:ENST00000331224 Ensembl:ENST00000341267
GeneID:8788 KEGG:hsa:8788 UCSC:uc001yhs.4 UCSC:uc001yhu.4 CTD:8788
GeneCards:GC14P101193 H-InvDB:HIX0131238 HGNC:HGNC:2907
HPA:CAB005872 MIM:176290 neXtProt:NX_P80370 Orphanet:96184
Orphanet:96334 PharmGKB:PA27363 eggNOG:NOG306005
HOGENOM:HOG000072581 HOVERGEN:HBG007065 InParanoid:P80370
OMA:CQKKDGP PhylomeDB:P80370 ChEMBL:CHEMBL5671 ChiTaRS:DLK1
GenomeRNAi:8788 NextBio:32960 ArrayExpress:P80370 Bgee:P80370
CleanEx:HS_DLK1 Genevestigator:P80370 GermOnline:ENSG00000185559
Uniprot:P80370
Length = 383
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 49/156 (31%), Positives = 66/156 (42%)
Query: 195 CDPQSEQCVDLADGFECVCGRGYNKSEEGGECVP-VCSQGCVRGVCSEPDKCQCDFGYVG 253
C+PQ+ C D D C C G+ +G C V S GC+ G+C EP +C C G+ G
Sbjct: 30 CNPQNGFCED--DNV-CRCQPGW----QGPLCDQCVTSPGCLHGLCGEPGQCICTDGWDG 82
Query: 254 VNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDP--RDNGECVPCSE 311
C + A CA C+ + +C C P Y G + +G CV
Sbjct: 83 ELCDRDVRACSSAPCANNR---TCVSLDDGLY--ECS-CAPGYSGKDCQKKDGPCVINGS 136
Query: 312 YCNGHTGLCIN----ASLASLPFSPE-SGGTSELAA 342
C H G C++ AS AS P SG E+ A
Sbjct: 137 PCQ-HGGTCVDDEGRASHASCLCPPGFSGNFCEIVA 171
>UNIPROTKB|F1MRZ6 [details] [associations]
symbol:TNC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060740 "prostate gland epithelium morphogenesis"
evidence=IEA] [GO:0060739 "mesenchymal-epithelial cell signaling
involved in prostate gland development" evidence=IEA] [GO:0045545
"syndecan binding" evidence=IEA] [GO:0014012 "peripheral nervous
system axon regeneration" evidence=IEA] [GO:0010628 "positive
regulation of gene expression" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005614 "interstitial
matrix" evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50026
PROSITE:PS50853 SMART:SM00060 SMART:SM00181 INTERPRO:IPR002181
GO:GO:0007165 GO:GO:0005615 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0008284 GO:GO:0007528 SUPFAM:SSF49265 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 GO:GO:0010628 GO:GO:0005604
GO:GO:0060740 Gene3D:3.90.215.10 Gene3D:4.10.530.10
InterPro:IPR014716 InterPro:IPR014715 Pfam:PF00147 SMART:SM00186
SUPFAM:SSF56496 PROSITE:PS51406 GO:GO:0014012 GO:GO:0005614
InterPro:IPR013111 Pfam:PF07974 Pfam:PF12661 OMA:GQRSCPN
GO:GO:0060739 GeneTree:ENSGT00690000102056 EMBL:DAAA02024590
EMBL:DAAA02024591 EMBL:DAAA02024592 EMBL:DAAA02024593
IPI:IPI00694504 Ensembl:ENSBTAT00000000752 ArrayExpress:F1MRZ6
Uniprot:F1MRZ6
Length = 2231
Score = 123 (48.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 46/138 (33%), Positives = 62/138 (44%)
Query: 185 ENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV-CSQGCV-RGVCSEP 242
E C D C Q +CVD G CVC G+ G +C + C C RG C +
Sbjct: 528 ELRCPGD---CS-QRGRCVD---G-RCVCEDGF----AGPDCADLACPGNCHGRGRCVD- 574
Query: 243 DKCQCDFGYVGVNCSIQCQCNGHADCAGPDK-LDVCLRCHNHTKGPQCDKCEPLYVGDPR 301
+C C G+ G +C+ Q +C G DC G + +D CH GP C + D
Sbjct: 575 GQCVCLEGFTGPDCA-QRRCPG--DCHGQGRCVDGQCVCHEGFTGPDC--AQRSCPNDCS 629
Query: 302 DNGECVPCSEYCN-GHTG 318
+ G+CV CN G+TG
Sbjct: 630 NWGQCVSGRCVCNEGYTG 647
Score = 117 (46.2 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 47/134 (35%), Positives = 60/134 (44%)
Query: 193 HTCDPQSEQCVDLADGFECVCGRGYNKSEEGGE--CVPVCSQGCVRGVCSEPDKCQCDFG 250
H C Q +CV+ G CVC Y E+ E C CSQ RG C + +C C+ G
Sbjct: 502 HDCH-QHGRCVN---GM-CVCDDAYT-GEDCRELRCPGDCSQ---RGRCVD-GRCVCEDG 551
Query: 251 YVGVNCS-IQC--QCNGHADCAGPDKLDVCLRCHNHTKGPQCD--KCEPLYVGDPRDNGE 305
+ G +C+ + C C+G C D VCL T GP C +C P GD G
Sbjct: 552 FAGPDCADLACPGNCHGRGRCV--DGQCVCLE--GFT-GPDCAQRRC-P---GDCHGQGR 602
Query: 306 CVPCSEYCN-GHTG 318
CV C+ G TG
Sbjct: 603 CVDGQCVCHEGFTG 616
Score = 66 (28.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 23/80 (28%), Positives = 30/80 (37%)
Query: 39 SCPLRCDQRTDCQD--CLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVC----GL 92
+CP C C + C+ G G +C S C S +E C G C G
Sbjct: 375 ACPHACHGHGRCDEGQCVCDEGFAGP--DC--SE--RRCPSDCHERGRCVDGRCECNDGF 428
Query: 93 VLGPHQAPQCPRSCSAYTQC 112
QCPR CS + +C
Sbjct: 429 TGADCGELQCPRDCSGHGRC 448
Score = 54 (24.1 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 16/51 (31%), Positives = 21/51 (41%)
Query: 95 GPH-QAPQCPRSCSAYTQC--STCLRHA-----HCGWCALQRDTTGGMGVC 137
GP+ P+CP +C + QC C+ H CG A D G C
Sbjct: 212 GPNCSEPECPGNCHLHGQCLDGQCVCHEGFTGEDCGQLACPSDCND-QGKC 261
Score = 39 (18.8 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 31 NIKLKTGSSCPLRCDQRTDCQDCLTSS 57
NIKL GS C + + + +D S
Sbjct: 85 NIKLPVGSQCSVDLESASGEKDLAAPS 111
>UNIPROTKB|F1P178 [details] [associations]
symbol:NELL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001007 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00093 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS01208 PROSITE:PS50026 PROSITE:PS50184 SMART:SM00179
SMART:SM00181 SMART:SM00214 InterPro:IPR000152 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 Pfam:PF02210 SMART:SM00210
GeneTree:ENSGT00700000104369 IPI:IPI00595649 EMBL:AADN02010010
EMBL:AADN02010011 EMBL:AADN02010012 EMBL:AADN02010013
EMBL:AADN02010014 Ensembl:ENSGALT00000015643 ArrayExpress:F1P178
Uniprot:F1P178
Length = 755
Score = 134 (52.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 62/214 (28%), Positives = 79/214 (36%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSE-----EGGECVPV---CSQG 233
C +EC H C ++ CV+ F C+C GY + + E ECV C +
Sbjct: 377 CEDVDECAEGQHYCR-ENTMCVNTPGSFMCICKTGYIRIDDYSCTEHDECVTNQHNCDEN 435
Query: 234 --CVRGVCSEPDKCQCDFGYVGVN--CSIQCQ--CNGHADCAGPDKLDVCLRCHNHTKGP 287
C V C C GY G C C+ C C + VC C GP
Sbjct: 436 ALCFNTVGGH--NCVCKLGYTGNGTVCKAFCKDGCRNGGACIASN---VCA-CPQGFTGP 489
Query: 288 QC----DKCEPLYVG-DPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAA 342
C D+C +V D R N +P +C G N FSP SG + E
Sbjct: 490 SCETDIDECSDGFVQCDSRANCINLPGWYHCECRDGYHDNGM-----FSP-SGESCE--- 540
Query: 343 FLDEGPTTRARCMH---CGNHTTGPKCEDCVEGK 373
+DE T R C + C N G C C GK
Sbjct: 541 DIDECATGRHSCANDTVCFNLDGGYDCR-CPHGK 573
>RGD|1306311 [details] [associations]
symbol:Lamb1 "laminin, beta 1" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005178 "integrin
binding" evidence=ISO] [GO:0005201 "extracellular matrix structural
constituent" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005578 "proteinaceous extracellular matrix"
evidence=ISO] [GO:0005604 "basement membrane" evidence=ISO]
[GO:0005605 "basal lamina" evidence=ISO] [GO:0005606 "laminin-1
complex" evidence=ISO] [GO:0005607 "laminin-2 complex"
evidence=ISO] [GO:0005615 "extracellular space" evidence=ISO]
[GO:0007162 "negative regulation of cell adhesion" evidence=ISO]
[GO:0007566 "embryo implantation" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0016477 "cell migration"
evidence=ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0030335 "positive regulation of cell migration" evidence=ISO]
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0031175
"neuron projection development" evidence=ISO] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=ISO]
[GO:0042476 "odontogenesis" evidence=ISO] [GO:0043208
"glycosphingolipid binding" evidence=ISO] [GO:0043256 "laminin
complex" evidence=ISO] [GO:0043257 "laminin-8 complex"
evidence=ISO] [GO:0043259 "laminin-10 complex" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0070062 "extracellular vesicular exosome" evidence=ISO]
RGD:1306311 GO:GO:0048471 GO:GO:0005615 GO:GO:0016477 GO:GO:0007162
GO:GO:0030335 GO:GO:0031012 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0042476 GO:GO:0007566 InterPro:IPR009053
SUPFAM:SSF46579 GO:GO:0005201 GO:GO:0043208 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005606
GO:GO:0043259 OrthoDB:EOG44BB1B GeneTree:ENSGT00620000087753
InterPro:IPR013015 PROSITE:PS51116 IPI:IPI00365542
Ensembl:ENSRNOT00000008321 UCSC:RGD:1306311 ArrayExpress:D3ZQN7
Uniprot:D3ZQN7
Length = 1834
Score = 138 (53.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 66/217 (30%), Positives = 83/217 (38%)
Query: 181 KCPPENECLNDHHTCDPQSEQCVDLAD--GFECV-CGRGYNKSEEGGECVPV-CS-QGCV 235
+C P+ + CDP QC + G C C G G C P C QG V
Sbjct: 822 ECDPQGSLSS---VCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPNG-CKPCDCHLQGSV 877
Query: 236 RGVCSE-PDKCQCDFGYVGVNC-----------SIQ-CQCNGHA-DCAGPDKLD-VCLRC 280
C +C C G C S Q CQCNGHA DC D + CL C
Sbjct: 878 SAFCDAVTGQCHCFQGIYARQCDRCLPGFWGFPSCQPCQCNGHAEDC---DTVTGECLSC 934
Query: 281 HNHTKGPQCDKCEPLYVGDPR-DNGE-CVPCSEYCNGHTGLCINASLASLPFSPESGGTS 338
++T G C++C Y GDP +G+ C PC +G S P T
Sbjct: 935 QDYTTGHNCERCLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQFARSCYQDPV------TL 988
Query: 339 ELAAFLDEGPTTRARCMHC-----GNHTT-GPKCEDC 369
+LA D G +RC C GN + G C+ C
Sbjct: 989 QLACVCDPG-YIGSRCDGCASGYFGNPSDFGGSCQPC 1024
Score = 129 (50.5 bits), Expect = 0.00015, P = 0.00015
Identities = 42/122 (34%), Positives = 53/122 (43%)
Query: 211 CVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAG 270
CVC GY G C GC G P DFG G +C CQC+ + D
Sbjct: 992 CVCDPGYI----GSRC-----DGCASGYFGNPS----DFG--G-SCQ-PCQCHHNIDTTD 1034
Query: 271 PDKLDV----CLRCHNHTKGPQCDKCEPLYVGDP--RDNGECVPCS------EYCNGHTG 318
P+ D CL+C HT+G C C+ Y GD +D +CV C+ E+CNG
Sbjct: 1035 PEACDKETGRCLKCLYHTEGDHCQFCQHGYYGDALRQDCRKCV-CNYLGTVREHCNGSDC 1093
Query: 319 LC 320
C
Sbjct: 1094 HC 1095
>UNIPROTKB|Q90819 [details] [associations]
symbol:JAG1 "Delta-like protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0002011 "morphogenesis of
an epithelial sheet" evidence=IEA] [GO:0003184 "pulmonary valve
morphogenesis" evidence=IEA] [GO:0003215 "cardiac right ventricle
morphogenesis" evidence=IEA] [GO:0005112 "Notch binding"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0032495 "response to muramyl dipeptide" evidence=IEA]
[GO:0035909 "aorta morphogenesis" evidence=IEA] [GO:0042491
"auditory receptor cell differentiation" evidence=IEA] [GO:0045177
"apical part of cell" evidence=IEA] [GO:0045599 "negative
regulation of fat cell differentiation" evidence=IEA] [GO:0045639
"positive regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0045747 "positive regulation of Notch signaling
pathway" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0060411 "cardiac septum morphogenesis" evidence=IEA]
[GO:0061156 "pulmonary artery morphogenesis" evidence=IEA]
[GO:0061309 "cardiac neural crest cell development involved in
outflow tract morphogenesis" evidence=IEA] [GO:0061314 "Notch
signaling involved in heart development" evidence=IEA] [GO:0061444
"endocardial cushion cell development" evidence=IEA] [GO:0072017
"distal tubule development" evidence=IEA] [GO:0072070 "loop of
Henle development" evidence=IEA] [GO:0097150 "neuronal stem cell
maintenance" evidence=IEA] [GO:2000737 "negative regulation of stem
cell differentiation" evidence=IEA] InterPro:IPR000742
InterPro:IPR001007 InterPro:IPR001774 InterPro:IPR001881
InterPro:IPR011651 InterPro:IPR018097 InterPro:IPR026219
Pfam:PF00008 Pfam:PF01414 Pfam:PF07645 Pfam:PF07657 PRINTS:PR02059
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51051 SMART:SM00051
SMART:SM00179 SMART:SM00181 SMART:SM00214 InterPro:IPR000152
GO:GO:0016021 GO:GO:0007275 GO:GO:0005886 GO:GO:0045177
GO:GO:0007219 GO:GO:0005509 GO:GO:0045747 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 GO:GO:0045599 eggNOG:NOG12793
PROSITE:PS00010 HSSP:P00740 Pfam:PF12661
GeneTree:ENSGT00700000104308 GO:GO:0045639 GO:GO:2000737
HOGENOM:HOG000113124 HOVERGEN:HBG031645 OrthoDB:EOG4H729Q
EMBL:AADN02041133 EMBL:AADN02041134 EMBL:AADN02041135 EMBL:X95283
IPI:IPI00572377 UniGene:Gga.53615 STRING:Q90819
Ensembl:ENSGALT00000039291 InParanoid:Q90819 Uniprot:Q90819
Length = 1193
Score = 136 (52.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 41/135 (30%), Positives = 53/135 (39%)
Query: 195 CDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGV 254
C P+ C G EC C G+ + + +C+P GCV G C EP +C C+ + G
Sbjct: 212 CSPKHGSCT--VPG-ECRCQYGW-QGQYCDKCIP--HPGCVHGTCIEPWQCLCETNWGGQ 265
Query: 255 NCSIQCQ-CNGHADC--------AGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGE 305
C C H C GPDK C C G C+ E + DP NG
Sbjct: 266 LCDKDLNYCGTHPPCLNGGTCSNTGPDKYQ-C-SCPEGYSGQNCEIAEHACLSDPCHNGG 323
Query: 306 CVPCSEYCNGHTGLC 320
C E G +C
Sbjct: 324 S--CLETSTGFECVC 336
Score = 121 (47.7 bits), Expect = 0.00069, P = 0.00069
Identities = 54/202 (26%), Positives = 72/202 (35%)
Query: 188 CLNDHHTCDPQ----SEQCVDLADGFECVCG---RGYNKSEEGGECV--PVCSQGCVRGV 238
C ++ C P C DL DGF+C+C G + EC P + R +
Sbjct: 345 CTDNIDDCSPNPCGHGGTCQDLVDGFKCICPPQWTGKTCQLDANECEGKPCVNANSCRNL 404
Query: 239 CSEPDKCQCDFGYVGVNCSIQCQ-CNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYV 297
C C G+ G NC I C G G C + G +C C P Y
Sbjct: 405 IGSY-YCDCITGWSGHNCDININDCRGQCQNGGS--------CRDLVNGYRCI-CSPGYA 454
Query: 298 GD--PRDNGECV--PCSEYCNGHTGLCINASLASLPFSPESGGTSELAA-FLDEGPTTR- 351
GD +D EC PC GH IN P + SG +L + + P
Sbjct: 455 GDHCEKDINECASNPCMN--GGHCQDEINGFQCLCP-AGFSGNLCQLDIDYCEPNPCQNG 511
Query: 352 ARCMHCGNHTTGPKCEDCVEGK 373
A+C + C + EGK
Sbjct: 512 AQCFNLAMDYFC-NCPEDYEGK 532
>UNIPROTKB|F1LX88 [details] [associations]
symbol:Ntng1 "Protein Ntng1" species:10116 "Rattus
norvegicus" [GO:0007409 "axonogenesis" evidence=IEA] [GO:0046658
"anchored to plasma membrane" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 RGD:1563465 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 IPI:IPI00559428 ProteinModelPortal:F1LX88
Ensembl:ENSRNOT00000043455 ArrayExpress:F1LX88 Uniprot:F1LX88
Length = 401
Score = 130 (50.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 35/114 (30%), Positives = 52/114 (45%)
Query: 259 QCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTG 318
+C+CN HA D + C ++T GP C KC+ Y G P G +P + G
Sbjct: 214 RCKCNLHATMCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPK---GTAN 270
Query: 319 LCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCVEG 372
CI S++S+ + L + D + C C TTGPKC++C+ G
Sbjct: 271 TCI-PSISSIG----KCYCNPLGSIHDRCNGS-GFC-ECKTGTTGPKCDECLPG 317
>UNIPROTKB|Q9DER5 [details] [associations]
symbol:TENM2 "Teneurin-2" species:9031 "Gallus gallus"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016605 "PML
body" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0016337 "cell-cell adhesion" evidence=IDA]
[GO:0030054 "cell junction" evidence=IDA] [GO:0030175 "filopodium"
evidence=IDA] [GO:0030426 "growth cone" evidence=IDA] [GO:0030425
"dendrite" evidence=IDA] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0046982 "protein heterodimerization
activity" evidence=ISS] [GO:0007157 "heterophilic cell-cell
adhesion" evidence=ISS] [GO:0005102 "receptor binding"
evidence=ISS] [GO:0050839 "cell adhesion molecule binding"
evidence=ISS] [GO:0043005 "neuron projection" evidence=ISS]
[GO:0043197 "dendritic spine" evidence=ISS] [GO:0045202 "synapse"
evidence=ISS] [GO:0045211 "postsynaptic membrane" evidence=ISS]
[GO:0007411 "axon guidance" evidence=ISS] [GO:0035584
"calcium-mediated signaling using intracellular calcium source"
evidence=ISS] [GO:0005911 "cell-cell junction" evidence=ISS]
[GO:0051491 "positive regulation of filopodium assembly"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR000742 InterPro:IPR009471 Pfam:PF06484 PROSITE:PS50026
PROSITE:PS51361 SMART:SM00181 GO:GO:0005783 GO:GO:0016021
GO:GO:0005886 GO:GO:0005794 GO:GO:0007411 GO:GO:0042803
GO:GO:0016605 GO:GO:0045211 Gene3D:2.120.10.30 InterPro:IPR011042
GO:GO:0005102 GO:GO:0043197 GO:GO:0005911 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0000122 GO:GO:0030175 GO:GO:0030426
PROSITE:PS01186 GO:GO:0046982 InterPro:IPR008969 SUPFAM:SSF49464
GO:GO:0050839 GO:GO:0007157 GO:GO:0051491 PROSITE:PS51125
GO:GO:0035584 InterPro:IPR011044 SUPFAM:SSF50969 HSSP:P00750
eggNOG:NOG323120 HOGENOM:HOG000231701 HOVERGEN:HBG080306
InterPro:IPR006530 TIGRFAMs:TIGR01643 EMBL:AJ279031 EMBL:AJ245711
IPI:IPI00580386 IPI:IPI00585708 IPI:IPI00807213 IPI:IPI00807218
RefSeq:NP_001003718.1 RefSeq:NP_989428.2 UniGene:Gga.2983
ProteinModelPortal:Q9DER5 STRING:Q9DER5 PRIDE:Q9DER5 GeneID:373854
KEGG:gga:373854 CTD:563197 OrthoDB:EOG4QC14D NextBio:20813401
InterPro:IPR022385 TIGRFAMs:TIGR03696 Uniprot:Q9DER5
Length = 2802
Score = 147 (56.8 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 61/193 (31%), Positives = 80/193 (41%)
Query: 195 CDPQSEQCVDLADG-----FE--CVCGRGYNKSE--EGGECV-PVCSQGCVRGVCSEPDK 244
CD QC+D + G E CVC GY K E E +C+ P CS GVC +
Sbjct: 661 CDVPISQCIDPSCGGHGSCIEGNCVCSIGY-KGENCEEVDCLDPTCSN---HGVCVNGE- 715
Query: 245 CQCDFGYVGVNCSI---QC--QCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGD 299
C C G+ G+NC + QC QC+GH L C C + GP C E V D
Sbjct: 716 CLCSPGWGGINCELPRAQCPDQCSGHGTYLSDTGL--C-SCDPNWMGPDCS-VEVCSV-D 770
Query: 300 PRDNGECVPCSEYCN-GHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHC- 357
+G C+ + C G TG+ + + P E G + EG HC
Sbjct: 771 CGTHGVCIGGACRCEEGWTGVACDQRVCH-PRCTEHGTCKDGKCECREGWNGE----HCT 825
Query: 358 -GNHTTGPKCEDC 369
G TTG + + C
Sbjct: 826 IGRQTTGTETDGC 838
Score = 42 (19.8 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 102 CPRSCSAYTQCSTCLRHAHCGW 123
CPR+C +C + + H G+
Sbjct: 604 CPRNCHGNGECVSGVCHCFPGF 625
>UNIPROTKB|Q90827 [details] [associations]
symbol:NEL "Protein NEL" species:9031 "Gallus gallus"
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001007 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00093 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS01208
PROSITE:PS50026 PROSITE:PS50184 SMART:SM00179 SMART:SM00181
SMART:SM00214 InterPro:IPR000152 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
Pfam:PF02210 SMART:SM00210 eggNOG:NOG253557 HOGENOM:HOG000217920
HOVERGEN:HBG004805 CTD:4753 EMBL:D86747 IPI:IPI00595649
RefSeq:NP_001025911.1 UniGene:Gga.595 ProteinModelPortal:Q90827
STRING:Q90827 PRIDE:Q90827 GeneID:417799 KEGG:gga:417799
NextBio:20821047 Uniprot:Q90827
Length = 816
Score = 134 (52.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 62/214 (28%), Positives = 79/214 (36%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSE-----EGGECVPV---CSQG 233
C +EC H C ++ CV+ F C+C GY + + E ECV C +
Sbjct: 438 CEDVDECAEGQHYCR-ENTMCVNTPGSFMCICKTGYIRIDDYSCTEHDECVTNQHNCDEN 496
Query: 234 --CVRGVCSEPDKCQCDFGYVGVN--CSIQCQ--CNGHADCAGPDKLDVCLRCHNHTKGP 287
C V C C GY G C C+ C C + VC C GP
Sbjct: 497 ALCFNTVGGH--NCVCKLGYTGNGTVCKAFCKDGCRNGGACIASN---VCA-CPQGFTGP 550
Query: 288 QC----DKCEPLYVG-DPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAA 342
C D+C +V D R N +P +C G N FSP SG + E
Sbjct: 551 SCETDIDECSDGFVQCDSRANCINLPGWYHCECRDGYHDNGM-----FSP-SGESCE--- 601
Query: 343 FLDEGPTTRARCMH---CGNHTTGPKCEDCVEGK 373
+DE T R C + C N G C C GK
Sbjct: 602 DIDECATGRHSCANDTVCFNLDGGYDCR-CPHGK 634
>UNIPROTKB|Q14766 [details] [associations]
symbol:LTBP1 "Latent-transforming growth factor
beta-binding protein 1" species:9606 "Homo sapiens" [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0019838 "growth factor
binding" evidence=IEA] [GO:0005024 "transforming growth factor
beta-activated receptor activity" evidence=NAS] [GO:0005578
"proteinaceous extracellular matrix" evidence=NAS] [GO:0031012
"extracellular matrix" evidence=IDA] [GO:0035583 "sequestering of
TGFbeta in extracellular matrix" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 Reactome:REACT_118779
InterPro:IPR000152 EMBL:M34057 EMBL:CH471053 GO:GO:0005578
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0005024
PROSITE:PS01186 PROSITE:PS00010 Gene3D:3.90.290.10
InterPro:IPR017878 Pfam:PF00683 SUPFAM:SSF57581 PROSITE:PS51364
GO:GO:0035583 EMBL:AC020594 EMBL:AF489528 EMBL:AB208801
EMBL:AC019195 EMBL:AC019127 EMBL:BC130289 EMBL:L48925 EMBL:BP291349
IPI:IPI00302679 IPI:IPI00784258 IPI:IPI00894247 IPI:IPI00973086
IPI:IPI00973177 PIR:A35626 RefSeq:NP_000618.3 RefSeq:NP_001159736.1
RefSeq:NP_001159737.1 RefSeq:NP_001159738.1 RefSeq:NP_996826.2
UniGene:Hs.619315 PDB:1KSQ PDBsum:1KSQ ProteinModelPortal:Q14766
SMR:Q14766 DIP:DIP-50011N IntAct:Q14766 MINT:MINT-1522113
STRING:Q14766 GlycoSuiteDB:P22064 PhosphoSite:Q14766 PaxDb:Q14766
PRIDE:Q14766 Ensembl:ENST00000354476 Ensembl:ENST00000390003
Ensembl:ENST00000404525 Ensembl:ENST00000404816
Ensembl:ENST00000407925 GeneID:4052 KEGG:hsa:4052 UCSC:uc002rou.3
UCSC:uc002rov.3 UCSC:uc021vft.1 CTD:4052 GeneCards:GC02P033172
HGNC:HGNC:6714 HPA:CAB025428 HPA:HPA006221 MIM:150390
neXtProt:NX_Q14766 PharmGKB:PA30477 eggNOG:NOG318792 KO:K08023
OMA:TQLGRCF OrthoDB:EOG4C87RH ChiTaRS:LTBP1
EvolutionaryTrace:Q14766 GenomeRNAi:4052 NextBio:15874
ArrayExpress:Q14766 Bgee:Q14766 CleanEx:HS_LTBP1
Genevestigator:Q14766 GermOnline:ENSG00000049323 Uniprot:Q14766
Length = 1721
Score = 140 (54.3 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 56/205 (27%), Positives = 81/205 (39%)
Query: 175 FSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGC 234
FS KC +EC H C +C + F C+C G+ SEEG C+ V C
Sbjct: 906 FSEQQRKCVDIDECTQVQHLCS--QGRCENTEGSFLCICPAGFMASEEGTNCIDV--DEC 961
Query: 235 VR-GVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGP-DKLDVCLRCHNHTKGPQCDKC 292
+R VC E C G C C G + +D CL N + P ++C
Sbjct: 962 LRPDVCGE-GHCVNTVG--AFRCEY-CDSGYRMTQRGRCEDIDECL---NPSTCPD-EQC 1013
Query: 293 EPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSEL-AAFL---DEGP 348
V P + +CVPC+E G G C++ P +G S L +++ +G
Sbjct: 1014 ----VNSP-GSYQCVPCTEGFRGWNGQCLDVDECLEPNVCANGDCSNLEGSYMCSCHKGY 1068
Query: 349 TTRARCMHCGNHTTGPKCEDCVEGK 373
T HC + + CV G+
Sbjct: 1069 TRTPDHKHCRDIDECQQGNLCVNGQ 1093
Score = 45 (20.9 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 14/55 (25%), Positives = 23/55 (41%)
Query: 13 QVAYTLEPRTVKTDANRTNIKLKTGSSCPLRCDQRTDCQDCLTSSGGEGGWHECR 67
QV + P KT R + GS C + +DC + G G+++C+
Sbjct: 542 QVIPHVYPVAAKTQLGRC-FQETIGSQCGKALPGLSKQEDCCGTVGTSWGFNKCQ 595
>MGI|MGI:2449455 [details] [associations]
symbol:Scarf1 "scavenger receptor class F, member 1"
species:10090 "Mus musculus" [GO:0005044 "scavenger receptor
activity" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IDA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=ISO] [GO:0016322 "neuron remodeling"
evidence=IMP] [GO:0016358 "dendrite development" evidence=IDA]
[GO:0030169 "low-density lipoprotein particle binding"
evidence=ISO] [GO:0048680 "positive regulation of axon
regeneration" evidence=IMP] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 MGI:MGI:2449455 GO:GO:0016021 GO:GO:0016358
GO:GO:0016322 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
GO:GO:0048680 GO:GO:0030169 InterPro:IPR009030 SUPFAM:SSF57184
GO:GO:0005044 Pfam:PF12661 GeneTree:ENSGT00690000101691
EMBL:AL591496 eggNOG:NOG284054 HOGENOM:HOG000015093 CTD:8578
HOVERGEN:HBG099941 OMA:GWWGPEC OrthoDB:EOG4S1T6G EMBL:AK220215
EMBL:AK133477 IPI:IPI00380906 RefSeq:NP_001004157.2
UniGene:Mm.10486 ProteinModelPortal:Q5ND28 SMR:Q5ND28 STRING:Q5ND28
PRIDE:Q5ND28 Ensembl:ENSMUST00000042808 GeneID:380713
KEGG:mmu:380713 UCSC:uc007kea.1 InParanoid:Q5ND28 NextBio:401151
Bgee:Q5ND28 Genevestigator:Q5ND28 Uniprot:Q5ND28
Length = 820
Score = 136 (52.9 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 57/205 (27%), Positives = 73/205 (35%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCSE 241
CPP +C+ + C+ D CVC G+ G EC C CVRG CS
Sbjct: 183 CPPGWWGRRCSFSCNCHTSPCMQ--DSGRCVCLPGW----WGPECSRKCQ--CVRGQCSV 234
Query: 242 PD-KCQCDFGYVGVNCSIQCQCNGH--ADC---AGPDKLDV--------CLRCHNHTKGP 287
C C G+ G+ C + C GH A C G +L+ C C G
Sbjct: 235 TSGHCSCPPGFHGIRCELPCN-PGHYGAQCKESCGHCELNATCSPVTGNCESCKPGWNGT 293
Query: 288 QCDKCEPLYVGDPRDNGECVPC--SEYCNGHTGLCINASLASLPFSPESGGTSELAAFLD 345
QC + P R G+C C E C TG C + L E+ L F
Sbjct: 294 QCKQPCPAGTFGERCTGQCPRCRLGEPCQAETGHCQHCDPGWLGHRCEN--PCPLGTF-- 349
Query: 346 EGPTTRARCMHCGNHTTGPKCEDCV 370
G + C C T +CV
Sbjct: 350 -GKGCSSTCPACAQGTCDAVTGECV 373
Score = 124 (48.7 bits), Expect = 0.00021, P = 0.00021
Identities = 43/140 (30%), Positives = 64/140 (45%)
Query: 194 TCDPQSEQCVDLADGFECVCGRGYNKSEEGGEC-VPVCS--QGCVRG-VCSEPDKCQCDF 249
T DP + + E C G+ + ++ EC +P+C C + VC +P C+C
Sbjct: 25 TLDPAGQHVCKGSSPSELQCCPGWRQKDQ--ECTIPICEGPDACRKEEVCVKPGLCRCKP 82
Query: 250 GYVGVNCSIQC--QCNGHADCAGPDKLDVCLRCHNHTKGPQCD------KCEPLYVGDPR 301
G+ G CS +C Q GH DC + C CH +G QC+ +C+P Y G
Sbjct: 83 GFFGAQCSSRCPGQYWGH-DCR-----ETC-PCH--PRG-QCEPATGDCQCQPNYWGRLC 132
Query: 302 DNG-ECVPCSEYCNGHTGLC 320
+ C P + C+ TGLC
Sbjct: 133 EFPCTCGPHGQ-CDPKTGLC 151
Score = 118 (46.6 bits), Expect = 0.00094, P = 0.00094
Identities = 61/219 (27%), Positives = 81/219 (36%)
Query: 181 KCPPE---NECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRG 237
+CP + ++C + C P+ QC + A G +C C Y G C C+ G G
Sbjct: 92 RCPGQYWGHDC-RETCPCHPRG-QC-EPATG-DCQCQPNY----WGRLCEFPCTCG-PHG 142
Query: 238 VCS-EPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCD-KCEPL 295
C + C CD G+ C CQCN + C C+ C G +C C
Sbjct: 143 QCDPKTGLCHCDPGWWSPTCRRPCQCNPASRC--DQATGTCV-CPPGWWGRRCSFSCNCH 199
Query: 296 YVGDPRDNGECV-------P-CSEYCNGHTGLC-INASLASLPFSPESGGTS-ELAAFLD 345
+D+G CV P CS C G C + + S P P G EL
Sbjct: 200 TSPCMQDSGRCVCLPGWWGPECSRKCQCVRGQCSVTSGHCSCP--PGFHGIRCELPCNPG 257
Query: 346 E-GPTTRARCMHCG-NHTTGP---KCEDCVEGKENRQSR 379
G + C HC N T P CE C G Q +
Sbjct: 258 HYGAQCKESCGHCELNATCSPVTGNCESCKPGWNGTQCK 296
Score = 42 (19.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 19/86 (22%), Positives = 30/86 (34%)
Query: 43 RCDQRTDCQDCLTSSGGEGGWHECRWSSMLN---ECISPSYEALYCAGGVCGLVLGPHQA 99
RC C + G+ H+CR + + +C P+ C G +
Sbjct: 79 RCKPGFFGAQCSSRCPGQYWGHDCRETCPCHPRGQC-EPATGDCQCQPNYWGRLC----- 132
Query: 100 PQCPRSCSAYTQCSTCLRHAHC--GW 123
+ P +C + QC HC GW
Sbjct: 133 -EFPCTCGPHGQCDPKTGLCHCDPGW 157
>ZFIN|ZDB-GENE-081107-41 [details] [associations]
symbol:si:ch73-105b23.1 "si:ch73-105b23.1"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-081107-41 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS01186 PROSITE:PS00010 InterPro:IPR026823 Pfam:PF12662
InterPro:IPR024731 Pfam:PF12947 GeneTree:ENSGT00700000104291
Gene3D:2.40.155.10 InterPro:IPR023413 EMBL:CU570977 IPI:IPI00960935
ProteinModelPortal:F1QW35 Ensembl:ENSDART00000123587 Uniprot:F1QW35
Length = 1315
Score = 131 (51.2 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 48/169 (28%), Positives = 69/169 (40%)
Query: 168 EVNNNDSFSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECV 227
E + +S+N KC +EC + C + QCV+ C C G+ + +G C
Sbjct: 621 ECTCKEGYSFNGTKCTDLDECESGVSNCS-KFAQCVNTVGSHLCFCLSGF--TGDGKNCS 677
Query: 228 PV--C---SQGC--VRGVCSEPD--KCQCDFGYVG--VNCSIQCQCNGHADCAGPDKLDV 276
+ C + GC V + P KC C G G +C +CN ++ P +
Sbjct: 678 DINECHFQNGGCHPVASCTNSPGSFKCTCPLGMTGSGFDCQDVDECNANSTL--PHNCSL 735
Query: 277 CLRCHNHTKGPQCDKCEPLYVGDP---RDNGECVPCSEYCNGHTGLCIN 322
CHN T+G KC Y G+ D EC P S C G+ C N
Sbjct: 736 LSTCHN-TEGSYICKCMEGYWGNGFTCSDLDECFPPS-IC-GNNMTCQN 781
Score = 125 (49.1 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 45/152 (29%), Positives = 64/152 (42%)
Query: 181 KCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCS 240
KC NEC D+ C P CV+ A F C CG+GYN ++ +CV + C G+CS
Sbjct: 230 KCTDINECATDN-IC-PAVAACVNTAGSFFCDCGQGYNFTQN--QCVDL--DECAIGLCS 283
Query: 241 EPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCH-N----HTKGPQCDKCEPL 295
C+ G +C + +G C D+ RCH N ++ G C
Sbjct: 284 PYASCENMPGSYKCSCIAGFKGDGLV-CEDVDECVTEKRCHVNALCINSPGKYNCSCMVG 342
Query: 296 YVGDPRDNGECVPCSEYCNGHTGLCINASLAS 327
Y G+ +C +E C G C N + S
Sbjct: 343 YTGN--GVSQCTDINE-CLVDNGGCKNRATCS 371
Score = 117 (46.2 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 50/163 (30%), Positives = 65/163 (39%)
Query: 175 FSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYN----KSEEGGEC---V 227
F + + C +EC + + C + QCV+ FEC C GY+ K + EC V
Sbjct: 588 FKGDGLTCSDIDEC--EENVCPEKETQCVNNPGSFECTCKEGYSFNGTKCTDLDECESGV 645
Query: 228 PVCSQ--GCVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTK 285
CS+ CV V S C F G NCS +C H G + C T
Sbjct: 646 SNCSKFAQCVNTVGSHLCFCLSGFTGDGKNCSDINEC--HFQNGGCHPVASC------TN 697
Query: 286 GPQCDKCE-PLYVGDPRDNGECVPCSEYCNGHTGLCINASLAS 327
P KC PL G +C E CN ++ L N SL S
Sbjct: 698 SPGSFKCTCPL--GMTGSGFDCQDVDE-CNANSTLPHNCSLLS 737
Score = 117 (46.2 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 41/165 (24%), Positives = 67/165 (40%)
Query: 173 DSFSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYN---KSEEGGECVPV 229
D + N C NECLN+ C S CV+ F C+C G+ S+ E +
Sbjct: 956 DGYIGNQTICEDVNECLNNSR-CSDHSI-CVNTLGSFMCLCDDGFTLNGTSDTQCEDIDE 1013
Query: 230 CSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHA-----DCAGPDKLDVCL---RCH 281
CS +C+ C G G C + + NG + +C+G +C C
Sbjct: 1014 CSNPDNGSICTN-GTCLNTIGSFGCVCDMGFRSNGTSCFDIDECSGSQNESICQLHSTCS 1072
Query: 282 NHTKGPQCDKCEPLYV---GDPRDNGECVPCSEYCNGHTGLCINA 323
N +C C+ ++ + +D EC+ C ++ +CIN+
Sbjct: 1073 NIPGSYKCH-CDSGFLLNRTECQDIDECLADDSPCTANS-VCINS 1115
Score = 52 (23.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 46 QRTDCQDCLTSSGGEGGWHECRWSSMLNECISPS 79
Q TD +CL +GG C S CI PS
Sbjct: 350 QCTDINECLVDNGGCKNRATCSNSKGSYSCICPS 383
Score = 45 (20.9 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 11/35 (31%), Positives = 14/35 (40%)
Query: 44 CDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISP 78
C + +DC SG G +C NEC P
Sbjct: 45 CTNKDGGRDCSCRSGFSGNGFQCTDD---NECARP 76
>RGD|3187 [details] [associations]
symbol:Notch1 "notch 1" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA polymerase
II promoter" evidence=ISO;ISS] [GO:0001047 "core promoter binding"
evidence=IEA;ISO;ISS] [GO:0001190 "RNA polymerase II transcription
factor binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA;ISO] [GO:0001669 "acrosomal
vesicle" evidence=IDA] [GO:0001701 "in utero embryonic development"
evidence=IEA;ISO] [GO:0001708 "cell fate specification"
evidence=IEA;ISO] [GO:0001837 "epithelial to mesenchymal transition"
evidence=ISO] [GO:0001889 "liver development" evidence=IEA;ISO]
[GO:0001947 "heart looping" evidence=IEA;ISO] [GO:0002040 "sprouting
angiogenesis" evidence=IEA;ISO] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=IMP] [GO:0002193
"MAML1-RBP-Jkappa- ICN1 complex" evidence=IEA;ISO] [GO:0002437
"inflammatory response to antigenic stimulus" evidence=IEA;ISO]
[GO:0003157 "endocardium development" evidence=ISO] [GO:0003160
"endocardium morphogenesis" evidence=IEA;ISO] [GO:0003162
"atrioventricular node development" evidence=IEA;ISO] [GO:0003169
"coronary vein morphogenesis" evidence=IEA;ISO] [GO:0003180 "aortic
valve morphogenesis" evidence=IEA;ISO] [GO:0003181 "atrioventricular
valve morphogenesis" evidence=IEA;ISO] [GO:0003184 "pulmonary valve
morphogenesis" evidence=IEA;ISO] [GO:0003192 "mitral valve formation"
evidence=IEA;ISO] [GO:0003198 "epithelial to mesenchymal transition
involved in endocardial cushion formation" evidence=IEA;ISO]
[GO:0003203 "endocardial cushion morphogenesis" evidence=ISO]
[GO:0003207 "cardiac chamber formation" evidence=ISO] [GO:0003208
"cardiac ventricle morphogenesis" evidence=ISO] [GO:0003209 "cardiac
atrium morphogenesis" evidence=ISO] [GO:0003213 "cardiac right atrium
morphogenesis" evidence=IEA;ISO] [GO:0003214 "cardiac left ventricle
morphogenesis" evidence=IEA;ISO] [GO:0003219 "cardiac right ventricle
formation" evidence=IEA;ISO] [GO:0003222 "ventricular trabecula
myocardium morphogenesis" evidence=IEA;ISO] [GO:0003241 "growth
involved in heart morphogenesis" evidence=IEA;ISO] [GO:0003256
"regulation of transcription from RNA polymerase II promoter involved
in myocardial precursor cell differentiation" evidence=IEA;ISO]
[GO:0003264 "regulation of cardioblast proliferation" evidence=IMP]
[GO:0003270 "Notch signaling pathway involved in regulation of
secondary heart field cardioblast proliferation" evidence=IEA;ISO]
[GO:0003273 "cell migration involved in endocardial cushion
formation" evidence=IEA;ISO] [GO:0003344 "pericardium morphogenesis"
evidence=IEA;ISO] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0004857 "enzyme inhibitor activity"
evidence=IEA;ISO;ISS] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IEA;ISO;IDA;TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0006959 "humoral
immune response" evidence=IEA;ISO] [GO:0007219 "Notch signaling
pathway" evidence=ISO;IMP] [GO:0007221 "positive regulation of
transcription of Notch receptor target" evidence=IEA;ISO;IMP]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0007368
"determination of left/right symmetry" evidence=ISO] [GO:0007386
"compartment pattern specification" evidence=IEA;ISO] [GO:0007409
"axonogenesis" evidence=IEA;ISO] [GO:0007440 "foregut morphogenesis"
evidence=IEA;ISO] [GO:0007492 "endoderm development"
evidence=IEA;ISO] [GO:0007507 "heart development" evidence=ISO]
[GO:0008284 "positive regulation of cell proliferation" evidence=ISO]
[GO:0008544 "epidermis development" evidence=ISO] [GO:0009790 "embryo
development" evidence=IDA] [GO:0009912 "auditory receptor cell fate
commitment" evidence=IEA;ISO] [GO:0009986 "cell surface"
evidence=IEA;ISO] [GO:0010001 "glial cell differentiation"
evidence=IEA;ISO] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0010718 "positive regulation of epithelial to
mesenchymal transition" evidence=IEA;ISO] [GO:0010812 "negative
regulation of cell-substrate adhesion" evidence=IEA;ISO] [GO:0010832
"negative regulation of myotube differentiation"
evidence=IEA;ISO;ISS] [GO:0014031 "mesenchymal cell development"
evidence=ISO] [GO:0014807 "regulation of somitogenesis"
evidence=IEA;ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA;ISO;ISS] [GO:0021515 "cell
differentiation in spinal cord" evidence=IEP] [GO:0021915 "neural
tube development" evidence=IEA;ISO] [GO:0030154 "cell
differentiation" evidence=ISO] [GO:0030182 "neuron differentiation"
evidence=ISO] [GO:0030216 "keratinocyte differentiation"
evidence=IEA;ISO] [GO:0030279 "negative regulation of ossification"
evidence=IEA;ISO] [GO:0030324 "lung development" evidence=IEA;ISO]
[GO:0030326 "embryonic limb morphogenesis" evidence=ISO] [GO:0030334
"regulation of cell migration" evidence=ISO] [GO:0030335 "positive
regulation of cell migration" evidence=IEA;ISO] [GO:0030513 "positive
regulation of BMP signaling pathway" evidence=IEA;ISO;ISS]
[GO:0030514 "negative regulation of BMP signaling pathway"
evidence=IEA;ISO] [GO:0030900 "forebrain development"
evidence=IEA;ISO] [GO:0031069 "hair follicle morphogenesis"
evidence=IEA;ISO] [GO:0031100 "organ regeneration" evidence=IEP]
[GO:0031490 "chromatin DNA binding" evidence=IEA;ISO] [GO:0031960
"response to corticosteroid stimulus" evidence=IEP] [GO:0032495
"response to muramyl dipeptide" evidence=IEA;ISO] [GO:0032496
"response to lipopolysaccharide" evidence=IEP] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA;ISO] [GO:0035914 "skeletal
muscle cell differentiation" evidence=ISO] [GO:0042127 "regulation of
cell proliferation" evidence=IMP] [GO:0042246 "tissue regeneration"
evidence=IEP] [GO:0042640 "anagen" evidence=IEA;ISO] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA;ISO]
[GO:0043066 "negative regulation of apoptotic process" evidence=ISO]
[GO:0043086 "negative regulation of catalytic activity"
evidence=ISO;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0045165 "cell fate commitment" evidence=ISO]
[GO:0045596 "negative regulation of cell differentiation"
evidence=ISO] [GO:0045603 "positive regulation of endothelial cell
differentiation" evidence=IMP] [GO:0045618 "positive regulation of
keratinocyte differentiation" evidence=IEA;ISO] [GO:0045662 "negative
regulation of myoblast differentiation" evidence=IEA;ISO] [GO:0045665
"negative regulation of neuron differentiation" evidence=ISO;IMP]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA;ISO] [GO:0045687 "positive regulation of glial cell
differentiation" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO;ISS]
[GO:0045944 "positive regulation of transcription from RNA polymerase
II promoter" evidence=ISO;IMP] [GO:0045955 "negative regulation of
calcium ion-dependent exocytosis" evidence=IEA;ISO] [GO:0046427
"positive regulation of JAK-STAT cascade" evidence=IEA;ISO;ISS]
[GO:0046533 "negative regulation of photoreceptor cell
differentiation" evidence=IEA;ISO] [GO:0048103 "somatic stem cell
division" evidence=IEA;ISO] [GO:0048663 "neuron fate commitment"
evidence=ISO] [GO:0048708 "astrocyte differentiation" evidence=IDA]
[GO:0048709 "oligodendrocyte differentiation" evidence=IEP]
[GO:0048711 "positive regulation of astrocyte differentiation"
evidence=IEA;ISO;ISS] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA;ISO;ISS] [GO:0048754
"branching morphogenesis of an epithelial tube" evidence=IEA;ISO]
[GO:0050678 "regulation of epithelial cell proliferation"
evidence=ISO] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=IEA;ISO] [GO:0050767 "regulation of
neurogenesis" evidence=ISO] [GO:0050768 "negative regulation of
neurogenesis" evidence=ISO;ISS] [GO:0055008 "cardiac muscle tissue
morphogenesis" evidence=ISO] [GO:0060038 "cardiac muscle cell
proliferation" evidence=IEA;ISO] [GO:0060045 "positive regulation of
cardiac muscle cell proliferation" evidence=IEA;ISO] [GO:0060253
"negative regulation of glial cell proliferation"
evidence=IEA;ISO;ISS] [GO:0060317 "cardiac epithelial to mesenchymal
transition" evidence=ISO] [GO:0060411 "cardiac septum morphogenesis"
evidence=ISO] [GO:0060412 "ventricular septum morphogenesis"
evidence=IEA;ISO] [GO:0060528 "secretory columnal luminar epithelial
cell differentiation involved in prostate glandular acinus
development" evidence=IEA;ISO] [GO:0060548 "negative regulation of
cell death" evidence=ISO] [GO:0060740 "prostate gland epithelium
morphogenesis" evidence=IEA;ISO] [GO:0060768 "regulation of
epithelial cell proliferation involved in prostate gland development"
evidence=IEA;ISO] [GO:0060842 "arterial endothelial cell
differentiation" evidence=IEA;ISO] [GO:0060843 "venous endothelial
cell differentiation" evidence=IEA;ISO] [GO:0060948 "cardiac vascular
smooth muscle cell development" evidence=IEA;ISO] [GO:0060956
"endocardial cell differentiation" evidence=IEA;ISO] [GO:0060979
"vasculogenesis involved in coronary vascular morphogenesis"
evidence=IEA;ISO] [GO:0060982 "coronary artery morphogenesis"
evidence=IEA;ISO] [GO:0061314 "Notch signaling involved in heart
development" evidence=ISO] [GO:0061384 "heart trabecula
morphogenesis" evidence=ISO] [GO:0061419 "positive regulation of
transcription from RNA polymerase II promoter in response to hypoxia"
evidence=IEA;ISO;ISS] [GO:0070986 "left/right axis specification"
evidence=IEA;ISO] [GO:0071372 "cellular response to
follicle-stimulating hormone stimulus" evidence=IEA;ISO] [GO:0072017
"distal tubule development" evidence=IEA] [GO:0072044 "collecting
duct development" evidence=IEA] [GO:0072144 "glomerular mesangial
cell development" evidence=IEA] [GO:0072602 "interleukin-4 secretion"
evidence=IEA;ISO] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA;ISO] [GO:0097150 "neuronal
stem cell maintenance" evidence=IEA;ISO] [GO:1901201 "regulation of
extracellular matrix assembly" evidence=IEA;ISO] [GO:2000737
"negative regulation of stem cell differentiation" evidence=IEA;ISO]
[GO:2000811 "negative regulation of anoikis" evidence=IEA;ISO]
[GO:2000974 "negative regulation of pro-B cell differentiation"
evidence=ISO;ISS] InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
InterPro:IPR022362 Pfam:PF00008 Pfam:PF00023 Pfam:PF00066
Pfam:PF06816 Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279
PRINTS:PR01452 PRINTS:PR01984 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004 SMART:SM00179
SMART:SM00181 SMART:SM00248 InterPro:IPR000152 RGD:3187 GO:GO:0016021
GO:GO:0005886 GO:GO:0005634 GO:GO:0005794 Reactome:REACT_111984
eggNOG:COG0666 GO:GO:0031100 GO:GO:0004857 GO:GO:0001669
GO:GO:0032496 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0045665 GO:GO:0005509
GO:GO:0004872 GO:GO:0007283 GO:GO:0006351 GO:GO:0019899
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0000122 GO:GO:0009790
GO:GO:0072144 GO:GO:0030513 GO:GO:0045603 GO:GO:0010718
PROSITE:PS01186 GO:GO:0042246 GO:GO:0001047 GO:GO:0046427
PROSITE:PS00010 GO:GO:0003160 GO:GO:0010812 GO:GO:0072044
GO:GO:0072017 GO:GO:0048709 GO:GO:0045668 GO:GO:0002052 GO:GO:2000811
GO:GO:0010832 GO:GO:0048711 GO:GO:0045662 GO:GO:0048715 GO:GO:0030514
GO:GO:0032495 GO:GO:0031960 GO:GO:0021515 GO:GO:0097150 GO:GO:0003180
GO:GO:0060253 SUPFAM:SSF90193 GO:GO:0048708 GO:GO:2000974
GO:GO:2000737 GO:GO:0061419 GO:GO:0002193 HOGENOM:HOG000234369
HOVERGEN:HBG052650 InterPro:IPR024600 Pfam:PF11936 OrthoDB:EOG4HX504
GO:GO:0007221 GO:GO:0003264 EMBL:X57405 IPI:IPI00766721 PIR:S18188
UniGene:Rn.25046 ProteinModelPortal:Q07008 SMR:Q07008 STRING:Q07008
PRIDE:Q07008 UCSC:RGD:3187 InParanoid:Q07008 ArrayExpress:Q07008
Genevestigator:Q07008 GermOnline:ENSRNOG00000019322 Uniprot:Q07008
Length = 2531
Score = 143 (55.4 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 50/162 (30%), Positives = 70/162 (43%)
Query: 201 QCVDLADGFECVCGRGYNKSE---EGGECVP-VCSQG-CVRGVCSEPDKCQCDFGYVGVN 255
+C+D + + CVC GY + + EC P C G C GV + C C GY G +
Sbjct: 542 KCLDGPNTYTCVCTEGYTGTHCEVDIDECDPDPCHIGLCKDGVATFT--CLCQPGYTGHH 599
Query: 256 CSI---QCQ---CNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPC 309
C +C C C D +CL C T GP C+ +P D+G C+
Sbjct: 600 CETNINECHSQPCRHGGTCQDRDNYYLCL-CLKGTTGPNCEINLDDCASNPCDSGTCLDK 658
Query: 310 SE-Y---CN-GHTGLCINASLASLPFSP-ESGGTSE--LAAF 343
+ Y C G+TG N ++ SP +GGT E +A F
Sbjct: 659 IDGYECACEPGYTGSMCNVNIDECAGSPCHNGGTCEDGIAGF 700
Score = 130 (50.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 47/141 (33%), Positives = 58/141 (41%)
Query: 188 CLNDHHTCDPQSEQ----CVDLADGFECVCGRGY---NKSEEGGECVPVCSQGCVRG-VC 239
C ++ C P Q C D GF C C GY N SEE EC+ SQ C G C
Sbjct: 1142 CEDEVDECSPNPCQNGATCTDYLGGFSCKCVAGYHGSNCSEEINECL---SQPCQNGGTC 1198
Query: 240 ---SEPDKCQCDFGYVGVNCSIQCQ-CNGHADCAGPDKLDVCLR---CHNHTKGPQCDKC 292
+ KC C G GV+C I C+ D A + C C + G C C
Sbjct: 1199 IDLTNTYKCSCPRGTQGVHCEINVDDCHPPLDPAS--RSPKCFNNGTCVDQVGGYTCT-C 1255
Query: 293 EPLYVGD--PRDNGECV--PC 309
P +VG+ D EC+ PC
Sbjct: 1256 PPGFVGERCEGDVNECLSNPC 1276
Score = 123 (48.4 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 47/152 (30%), Positives = 64/152 (42%)
Query: 181 KCPPE-NECLNDHHTCDPQSEQ-CVDLADGFECVCGRGYN--KSEE---GGECVPVCSQG 233
+C + NECL++ CDP+ Q CV + F C C G+ + E G P C G
Sbjct: 1263 RCEGDVNECLSN--PCDPRGTQNCVQRVNDFHCECRAGHTGRRCESVINGCRGKP-CRNG 1319
Query: 234 CVRGVCSEPDK---CQCDFGYVGVNC--------SIQCQCNGHADCAGPDKLDVCLRCHN 282
V V S + C+C + G C S++C NG +GP + CL C
Sbjct: 1320 GVCAVASNTARGFICRCPARFEGATCENDARTCGSLRC-LNGGTCISGP-RSPTCL-CLG 1376
Query: 283 HTKGPQCD--KCEPLYVGDPRDN-GECVPCSE 311
GP+C P +P N G C P SE
Sbjct: 1377 SFTGPECQFPASSPCVGSNPCYNQGTCEPTSE 1408
Score = 123 (48.4 bits), Expect = 0.00096, P = 0.00096
Identities = 58/205 (28%), Positives = 82/205 (40%)
Query: 186 NECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGEC---VPVC-SQGCVR-GVCS 240
NEC+++ C + C+D F+C+C GY EG C C S C+ G C
Sbjct: 454 NECISN--PCQNDAT-CLDQIGEFQCICMPGY----EGVYCEINTDECASSPCLHNGRCV 506
Query: 241 EPDK---CQCDFGYVGVNCSI---QCQ---CNGHADCA-GPDKLDVCLRCHNHTKGPQC- 289
+ CQC G+ G C +C C A C GP+ C+ +T G C
Sbjct: 507 DKINEFLCQCPKGFSGHLCQYDVDECASTPCKNGAKCLDGPNTY-TCVCTEGYT-GTHCE 564
Query: 290 ---DKCEP--LYVGDPRDNGECVPCSEYCN-GHTGLCINASLASLPFSP-ESGGTSELAA 342
D+C+P ++G +D C C G+TG ++ P GGT +
Sbjct: 565 VDIDECDPDPCHIGLCKDGVATFTC--LCQPGYTGHHCETNINECHSQPCRHGGTCQ--- 619
Query: 343 FLDEGPTTRARCMHCGNHTTGPKCE 367
D C+ C TTGP CE
Sbjct: 620 --DRD--NYYLCL-CLKGTTGPNCE 639
Score = 59 (25.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 24/102 (23%), Positives = 38/102 (37%)
Query: 32 IKLKTGSSCPLRCDQ--RTDCQD--CLTSSGG-----EGGWHECRWSSMLNECI-SPSYE 81
+K TG +C + D C CL G E G+ + ++EC SP +
Sbjct: 630 LKGTTGPNCEINLDDCASNPCDSGTCLDKIDGYECACEPGYTGSMCNVNIDECAGSPCHN 689
Query: 82 ALYCAGGVCGLVLGPHQAPQCPRSCSAYTQCST--CLRHAHC 121
C G+ G + P S +C++ C+ H C
Sbjct: 690 GGTCEDGIAGFTCRCPEGYHDPTCLSEVNECNSNPCI-HGAC 730
Score = 58 (25.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 25/95 (26%), Positives = 36/95 (37%)
Query: 36 TGSSCPLRCDQRTD--CQD---CLTSSGG-----EGGWHECRWSSMLNECISPSYEALYC 85
TGS C D+ + CQ+ C GG G+H S +NEC+S +
Sbjct: 1138 TGSYCEDEVDECSPNPCQNGATCTDYLGGFSCKCVAGYHGSNCSEEINECLSQPCQN--- 1194
Query: 86 AGGVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAH 120
GG C + ++ CPR C + H
Sbjct: 1195 -GGTCIDLTNTYKC-SCPRGTQG-VHCEINVDDCH 1226
Score = 47 (21.6 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 29/112 (25%), Positives = 40/112 (35%)
Query: 36 TGSSCPLRCDQ--RTDCQDCLTSSGGEGGWHECRWSSMLNE--CISPSYEALY--CAGGV 89
TGS C + D+ + C + T G G+ CR ++ C+S E C G
Sbjct: 671 TGSMCNVNIDECAGSPCHNGGTCEDGIAGF-TCRCPEGYHDPTCLSEVNECNSNPCIHGA 729
Query: 90 CGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHCGWCA---LQRDTTGGMGVCT 138
C L ++ C S T C C +D T G VCT
Sbjct: 730 CRDGLNGYKC-DCAPGWSG-TNCDINNNECESNPCVNGGTCKDMTSGY-VCT 778
Score = 41 (19.5 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 74 ECIS-PSYEALYC 85
+CI P YE +YC
Sbjct: 475 QCICMPGYEGVYC 487
>UNIPROTKB|Q07008 [details] [associations]
symbol:Notch1 "Neurogenic locus notch homolog protein 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0005509 "calcium
ion binding" evidence=IEA] [GO:2000974 "negative regulation of
pro-B cell differentiation" evidence=ISS] InterPro:IPR002110
InterPro:IPR000742 InterPro:IPR000800 InterPro:IPR001881
InterPro:IPR008297 InterPro:IPR010660 InterPro:IPR011656
InterPro:IPR018097 InterPro:IPR022362 Pfam:PF00008 Pfam:PF00023
Pfam:PF00066 Pfam:PF06816 Pfam:PF07645 Pfam:PF07684
PIRSF:PIRSF002279 PRINTS:PR01452 PRINTS:PR01984 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004
SMART:SM00179 SMART:SM00181 SMART:SM00248 InterPro:IPR000152
RGD:3187 GO:GO:0016021 GO:GO:0005886 GO:GO:0005634 GO:GO:0005794
Reactome:REACT_111984 eggNOG:COG0666 GO:GO:0031100 GO:GO:0004857
GO:GO:0001669 GO:GO:0032496 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0045665
GO:GO:0005509 GO:GO:0004872 GO:GO:0007283 GO:GO:0006351
GO:GO:0019899 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0000122
GO:GO:0009790 GO:GO:0072144 GO:GO:0030513 GO:GO:0045603
GO:GO:0010718 PROSITE:PS01186 GO:GO:0042246 GO:GO:0001047
GO:GO:0046427 PROSITE:PS00010 GO:GO:0003160 GO:GO:0010812
GO:GO:0072044 GO:GO:0072017 GO:GO:0048709 GO:GO:0045668
GO:GO:0002052 GO:GO:2000811 GO:GO:0010832 GO:GO:0048711
GO:GO:0045662 GO:GO:0048715 GO:GO:0030514 GO:GO:0032495
GO:GO:0031960 GO:GO:0021515 GO:GO:0097150 GO:GO:0003180
GO:GO:0060253 SUPFAM:SSF90193 GO:GO:0048708 GO:GO:2000974
GO:GO:2000737 GO:GO:0061419 GO:GO:0002193 HOGENOM:HOG000234369
HOVERGEN:HBG052650 InterPro:IPR024600 Pfam:PF11936
OrthoDB:EOG4HX504 GO:GO:0007221 GO:GO:0003264 EMBL:X57405
IPI:IPI00766721 PIR:S18188 UniGene:Rn.25046
ProteinModelPortal:Q07008 SMR:Q07008 STRING:Q07008 PRIDE:Q07008
UCSC:RGD:3187 InParanoid:Q07008 ArrayExpress:Q07008
Genevestigator:Q07008 GermOnline:ENSRNOG00000019322 Uniprot:Q07008
Length = 2531
Score = 143 (55.4 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 50/162 (30%), Positives = 70/162 (43%)
Query: 201 QCVDLADGFECVCGRGYNKSE---EGGECVP-VCSQG-CVRGVCSEPDKCQCDFGYVGVN 255
+C+D + + CVC GY + + EC P C G C GV + C C GY G +
Sbjct: 542 KCLDGPNTYTCVCTEGYTGTHCEVDIDECDPDPCHIGLCKDGVATFT--CLCQPGYTGHH 599
Query: 256 CSI---QCQ---CNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPC 309
C +C C C D +CL C T GP C+ +P D+G C+
Sbjct: 600 CETNINECHSQPCRHGGTCQDRDNYYLCL-CLKGTTGPNCEINLDDCASNPCDSGTCLDK 658
Query: 310 SE-Y---CN-GHTGLCINASLASLPFSP-ESGGTSE--LAAF 343
+ Y C G+TG N ++ SP +GGT E +A F
Sbjct: 659 IDGYECACEPGYTGSMCNVNIDECAGSPCHNGGTCEDGIAGF 700
Score = 130 (50.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 47/141 (33%), Positives = 58/141 (41%)
Query: 188 CLNDHHTCDPQSEQ----CVDLADGFECVCGRGY---NKSEEGGECVPVCSQGCVRG-VC 239
C ++ C P Q C D GF C C GY N SEE EC+ SQ C G C
Sbjct: 1142 CEDEVDECSPNPCQNGATCTDYLGGFSCKCVAGYHGSNCSEEINECL---SQPCQNGGTC 1198
Query: 240 ---SEPDKCQCDFGYVGVNCSIQCQ-CNGHADCAGPDKLDVCLR---CHNHTKGPQCDKC 292
+ KC C G GV+C I C+ D A + C C + G C C
Sbjct: 1199 IDLTNTYKCSCPRGTQGVHCEINVDDCHPPLDPAS--RSPKCFNNGTCVDQVGGYTCT-C 1255
Query: 293 EPLYVGD--PRDNGECV--PC 309
P +VG+ D EC+ PC
Sbjct: 1256 PPGFVGERCEGDVNECLSNPC 1276
Score = 123 (48.4 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 47/152 (30%), Positives = 64/152 (42%)
Query: 181 KCPPE-NECLNDHHTCDPQSEQ-CVDLADGFECVCGRGYN--KSEE---GGECVPVCSQG 233
+C + NECL++ CDP+ Q CV + F C C G+ + E G P C G
Sbjct: 1263 RCEGDVNECLSN--PCDPRGTQNCVQRVNDFHCECRAGHTGRRCESVINGCRGKP-CRNG 1319
Query: 234 CVRGVCSEPDK---CQCDFGYVGVNC--------SIQCQCNGHADCAGPDKLDVCLRCHN 282
V V S + C+C + G C S++C NG +GP + CL C
Sbjct: 1320 GVCAVASNTARGFICRCPARFEGATCENDARTCGSLRC-LNGGTCISGP-RSPTCL-CLG 1376
Query: 283 HTKGPQCD--KCEPLYVGDPRDN-GECVPCSE 311
GP+C P +P N G C P SE
Sbjct: 1377 SFTGPECQFPASSPCVGSNPCYNQGTCEPTSE 1408
Score = 123 (48.4 bits), Expect = 0.00096, P = 0.00096
Identities = 58/205 (28%), Positives = 82/205 (40%)
Query: 186 NECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGEC---VPVC-SQGCVR-GVCS 240
NEC+++ C + C+D F+C+C GY EG C C S C+ G C
Sbjct: 454 NECISN--PCQNDAT-CLDQIGEFQCICMPGY----EGVYCEINTDECASSPCLHNGRCV 506
Query: 241 EPDK---CQCDFGYVGVNCSI---QCQ---CNGHADCA-GPDKLDVCLRCHNHTKGPQC- 289
+ CQC G+ G C +C C A C GP+ C+ +T G C
Sbjct: 507 DKINEFLCQCPKGFSGHLCQYDVDECASTPCKNGAKCLDGPNTY-TCVCTEGYT-GTHCE 564
Query: 290 ---DKCEP--LYVGDPRDNGECVPCSEYCN-GHTGLCINASLASLPFSP-ESGGTSELAA 342
D+C+P ++G +D C C G+TG ++ P GGT +
Sbjct: 565 VDIDECDPDPCHIGLCKDGVATFTC--LCQPGYTGHHCETNINECHSQPCRHGGTCQ--- 619
Query: 343 FLDEGPTTRARCMHCGNHTTGPKCE 367
D C+ C TTGP CE
Sbjct: 620 --DRD--NYYLCL-CLKGTTGPNCE 639
Score = 59 (25.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 24/102 (23%), Positives = 38/102 (37%)
Query: 32 IKLKTGSSCPLRCDQ--RTDCQD--CLTSSGG-----EGGWHECRWSSMLNECI-SPSYE 81
+K TG +C + D C CL G E G+ + ++EC SP +
Sbjct: 630 LKGTTGPNCEINLDDCASNPCDSGTCLDKIDGYECACEPGYTGSMCNVNIDECAGSPCHN 689
Query: 82 ALYCAGGVCGLVLGPHQAPQCPRSCSAYTQCST--CLRHAHC 121
C G+ G + P S +C++ C+ H C
Sbjct: 690 GGTCEDGIAGFTCRCPEGYHDPTCLSEVNECNSNPCI-HGAC 730
Score = 58 (25.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 25/95 (26%), Positives = 36/95 (37%)
Query: 36 TGSSCPLRCDQRTD--CQD---CLTSSGG-----EGGWHECRWSSMLNECISPSYEALYC 85
TGS C D+ + CQ+ C GG G+H S +NEC+S +
Sbjct: 1138 TGSYCEDEVDECSPNPCQNGATCTDYLGGFSCKCVAGYHGSNCSEEINECLSQPCQN--- 1194
Query: 86 AGGVCGLVLGPHQAPQCPRSCSAYTQCSTCLRHAH 120
GG C + ++ CPR C + H
Sbjct: 1195 -GGTCIDLTNTYKC-SCPRGTQG-VHCEINVDDCH 1226
Score = 47 (21.6 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 29/112 (25%), Positives = 40/112 (35%)
Query: 36 TGSSCPLRCDQ--RTDCQDCLTSSGGEGGWHECRWSSMLNE--CISPSYEALY--CAGGV 89
TGS C + D+ + C + T G G+ CR ++ C+S E C G
Sbjct: 671 TGSMCNVNIDECAGSPCHNGGTCEDGIAGF-TCRCPEGYHDPTCLSEVNECNSNPCIHGA 729
Query: 90 CGLVLGPHQAPQCPRSCSAYTQCSTCLRHAHCGWCA---LQRDTTGGMGVCT 138
C L ++ C S T C C +D T G VCT
Sbjct: 730 CRDGLNGYKC-DCAPGWSG-TNCDINNNECESNPCVNGGTCKDMTSGY-VCT 778
Score = 41 (19.5 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 74 ECIS-PSYEALYC 85
+CI P YE +YC
Sbjct: 475 QCICMPGYEGVYC 487
WARNING: HSPs involving 321 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.479 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 380 366 0.00084 117 3 12 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 571
No. of states in DFA: 602 (64 KB)
Total size of DFA: 235 KB (2122 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.78u 0.17s 24.95t Elapsed: 00:00:02
Total cpu time: 24.87u 0.17s 25.04t Elapsed: 00:00:02
Start: Thu Aug 15 16:43:08 2013 End: Thu Aug 15 16:43:10 2013
WARNINGS ISSUED: 2