Query psy9827
Match_columns 627
No_of_seqs 379 out of 3819
Neff 8.0
Searched_HMMs 29240
Date Fri Aug 16 20:41:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9827.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9827hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xkx_A Disks large homolog 4; 100.0 3E-69 1E-73 622.1 49.5 521 50-612 59-719 (721)
2 3shw_A Tight junction protein 100.0 1.6E-57 5.6E-62 491.8 23.0 368 51-619 2-391 (468)
3 3tsz_A Tight junction protein 100.0 2.8E-57 9.6E-62 484.8 21.9 365 46-611 5-391 (391)
4 3tvt_A Disks large 1 tumor sup 100.0 2.7E-56 9.4E-61 457.4 15.5 254 312-613 4-289 (292)
5 3kfv_A Tight junction protein 100.0 7.5E-52 2.6E-56 423.8 11.2 279 312-613 3-302 (308)
6 1kjw_A Postsynaptic density pr 100.0 1.3E-45 4.5E-50 380.3 17.9 261 313-612 1-293 (295)
7 4dey_A Voltage-dependent L-typ 100.0 1.6E-36 5.4E-41 311.1 16.1 245 311-601 36-321 (337)
8 3ney_A 55 kDa erythrocyte memb 99.9 3.2E-26 1.1E-30 221.2 15.2 152 451-608 16-197 (197)
9 1ex7_A Guanylate kinase; subst 99.9 2.1E-25 7.3E-30 213.9 12.8 146 454-601 1-185 (186)
10 3r0h_A INAD, inactivation-NO-a 99.9 5E-21 1.7E-25 187.1 22.7 181 37-283 5-197 (206)
11 3gsl_A Disks large homolog 4; 99.9 4.9E-21 1.7E-25 185.3 20.4 168 50-283 5-191 (196)
12 4a8c_A Periplasmic PH-dependen 99.8 2E-19 6.7E-24 195.5 18.8 222 7-283 171-421 (436)
13 2qt5_A Glutamate receptor-inte 99.8 1.3E-18 4.3E-23 169.4 19.9 176 50-283 7-196 (200)
14 1p1d_A PDZ45, glutamate recept 99.8 2E-18 6.8E-23 167.4 19.0 171 49-282 5-195 (196)
15 3pv2_A DEGQ; trypsin fold, PDZ 99.8 1.5E-19 5.1E-24 197.0 11.6 227 7-283 189-444 (451)
16 1w9e_A Syntenin 1; cell adhesi 99.7 1.1E-16 3.6E-21 151.0 20.9 159 49-280 3-164 (166)
17 1kgd_A CASK, peripheral plasma 99.7 8.8E-17 3E-21 153.5 15.3 147 452-601 3-179 (180)
18 1ky9_A Protease DO, DEGP, HTRA 99.7 4.4E-19 1.5E-23 193.1 -1.2 214 8-283 195-441 (448)
19 3suz_A Amyloid beta A4 precurs 99.7 3.5E-18 1.2E-22 182.7 4.2 171 40-281 194-373 (388)
20 4fln_A Protease DO-like 2, chl 99.6 1.2E-15 4E-20 167.8 16.0 238 10-278 187-469 (539)
21 3tau_A Guanylate kinase, GMP k 99.6 2.6E-15 8.7E-20 146.8 13.1 148 453-603 7-191 (208)
22 3a00_A Guanylate kinase, GMP k 99.6 1E-15 3.5E-20 146.9 9.7 145 454-601 1-185 (186)
23 3rle_A Golgi reassembly-stacki 99.6 1.2E-14 4.3E-19 142.1 13.1 146 70-283 14-171 (209)
24 2byg_A Channel associated prot 99.5 4.7E-14 1.6E-18 124.9 10.1 97 35-131 9-114 (117)
25 2r4h_A Membrane-associated gua 99.5 9.7E-14 3.3E-18 121.8 11.8 100 32-131 6-109 (112)
26 1s96_A Guanylate kinase, GMP k 99.5 2.7E-13 9.1E-18 133.5 12.4 147 452-602 14-199 (219)
27 3b76_A E3 ubiquitin-protein li 99.4 2.2E-13 7.4E-18 120.7 9.8 93 39-131 13-113 (118)
28 1r6j_A Syntenin 1; PDZ, membra 99.4 5.6E-13 1.9E-17 109.6 11.0 76 49-129 3-80 (82)
29 2he4_A Na(+)/H(+) exchange reg 99.4 1.2E-12 4E-17 110.0 12.9 84 48-131 2-87 (90)
30 2dm8_A INAD-like protein; PDZ 99.4 5.7E-13 2E-17 117.6 9.9 99 36-134 3-106 (116)
31 1v6b_A Harmonin isoform A1; st 99.4 6.1E-13 2.1E-17 117.8 9.8 95 37-131 1-107 (118)
32 2qor_A Guanylate kinase; phosp 99.4 1.8E-12 6.3E-17 125.9 13.4 148 451-602 9-198 (204)
33 2iwo_A Multiple PDZ domain pro 99.4 1.2E-12 4E-17 116.4 10.1 89 45-133 19-115 (120)
34 3i4w_A Disks large homolog 4; 99.4 1.7E-12 5.9E-17 112.0 10.5 86 49-134 10-98 (104)
35 3l4f_D SH3 and multiple ankyri 99.4 2.8E-12 9.7E-17 115.8 12.2 92 38-131 17-124 (132)
36 2dlu_A INAD-like protein; PDZ 99.4 2.6E-12 8.7E-17 112.4 11.2 89 45-133 10-100 (111)
37 2fne_A Multiple PDZ domain pro 99.4 1.7E-12 5.7E-17 114.8 10.0 86 47-132 22-114 (117)
38 1g9o_A NHE-RF; PDZ domain, com 99.4 5.8E-12 2E-16 105.9 12.9 81 50-130 3-85 (91)
39 3tsv_A Tight junction protein 99.4 2E-12 6.9E-17 115.5 10.4 93 46-138 25-119 (124)
40 1wi2_A Riken cDNA 2700099C19; 99.4 5.9E-12 2E-16 108.8 12.8 90 42-132 7-100 (104)
41 1lvg_A Guanylate kinase, GMP k 99.4 3E-12 1E-16 123.9 12.0 145 454-601 4-188 (198)
42 2pkt_A PDZ and LIM domain prot 99.4 4.1E-12 1.4E-16 106.9 11.2 83 51-133 4-88 (91)
43 1wi4_A Synip, syntaxin binding 99.4 5.3E-12 1.8E-16 110.1 12.2 88 44-131 9-105 (109)
44 1d5g_A Human phosphatase HPTP1 99.3 8.4E-12 2.9E-16 106.1 12.8 83 49-131 4-93 (96)
45 2v90_A PDZ domain-containing p 99.3 5.5E-12 1.9E-16 107.3 11.6 85 49-133 2-91 (96)
46 2opg_A Multiple PDZ domain pro 99.3 8.2E-12 2.8E-16 106.6 12.7 85 50-134 4-93 (98)
47 3axa_A Afadin, nectin-3, prote 99.3 5.5E-12 1.9E-16 109.3 11.7 86 48-133 9-100 (106)
48 1uhp_A Hypothetical protein KI 99.3 5.7E-12 2E-16 109.4 11.7 84 49-132 7-102 (107)
49 1qav_A Alpha-1 syntrophin (res 99.3 6.3E-12 2.1E-16 105.5 11.3 82 49-130 3-89 (90)
50 2awx_A Synapse associated prot 99.3 6.7E-12 2.3E-16 108.6 11.8 84 50-133 3-95 (105)
51 2fe5_A Presynaptic protein SAP 99.3 7.5E-12 2.6E-16 105.9 11.8 82 50-131 3-93 (94)
52 3gge_A PDZ domain-containing p 99.3 8E-12 2.7E-16 104.8 11.7 82 50-131 5-90 (95)
53 2jik_A Synaptojanin-2 binding 99.3 5.9E-12 2E-16 108.1 11.2 84 49-132 6-98 (101)
54 2i1n_A Discs, large homolog 3; 99.3 6.3E-12 2.1E-16 108.2 11.3 83 51-133 5-96 (102)
55 2uzc_A Human pdlim5, PDZ and L 99.3 8E-12 2.7E-16 104.4 11.6 81 51-131 4-86 (88)
56 1rgw_A ZAsp protein; PDZ, cyph 99.3 4.5E-12 1.5E-16 105.1 9.9 80 52-131 3-84 (85)
57 3r68_A Na(+)/H(+) exchange reg 99.3 6.5E-12 2.2E-16 106.5 10.8 83 49-131 4-88 (95)
58 2q3g_A PDZ and LIM domain prot 99.3 5.6E-12 1.9E-16 105.6 10.2 79 53-131 6-86 (89)
59 1i16_A Interleukin 16, LCF; cy 99.3 3.3E-12 1.1E-16 115.1 9.2 93 40-132 19-119 (130)
60 1ujd_A KIAA0559 protein; PDZ d 99.3 8.6E-12 2.9E-16 110.2 11.8 84 50-133 12-111 (117)
61 2w4f_A Protein LAP4; structura 99.3 1.2E-11 4.2E-16 105.2 12.3 81 52-132 5-94 (97)
62 2kom_A Partitioning defective 99.3 1.1E-11 3.8E-16 110.2 12.4 97 35-131 13-120 (121)
63 2eno_A Synaptojanin-2-binding 99.3 6.3E-12 2.2E-16 111.6 10.8 92 41-132 6-108 (120)
64 1kwa_A Hcask/LIN-2 protein; PD 99.3 8.3E-12 2.8E-16 104.4 10.9 81 51-131 2-85 (88)
65 2dkr_A LIN-7 homolog B; LIN-7B 99.3 8.6E-12 2.9E-16 105.3 10.9 83 49-131 4-90 (93)
66 2qg1_A Multiple PDZ domain pro 99.3 1.1E-11 3.8E-16 104.4 11.5 83 49-131 3-89 (92)
67 2d92_A INAD-like protein; PDZ 99.3 9.9E-12 3.4E-16 108.2 11.5 84 48-131 13-105 (108)
68 2vsp_A PDZ domain-containing p 99.3 2.6E-12 8.8E-17 108.2 7.4 83 49-131 2-86 (91)
69 2pa1_A PDZ and LIM domain prot 99.3 1.1E-11 3.8E-16 103.3 11.2 79 53-131 5-85 (87)
70 1n7e_A AMPA receptor interacti 99.3 1.5E-11 5.1E-16 104.7 12.2 84 49-132 4-91 (97)
71 2ehr_A INAD-like protein; PDZ 99.3 1.1E-11 3.7E-16 109.5 11.7 85 48-132 13-111 (117)
72 2f5y_A Regulator of G-protein 99.3 1.1E-11 3.7E-16 104.3 11.1 82 50-133 3-85 (91)
73 1x5q_A LAP4 protein; PDZ domai 99.3 2.3E-11 8E-16 106.1 13.5 82 52-133 17-107 (110)
74 1ihj_A INAD; intermolecular di 99.3 8.7E-12 3E-16 106.4 10.5 83 49-131 4-97 (98)
75 1uit_A Human discs large 5 pro 99.3 1.3E-11 4.6E-16 108.9 12.0 90 49-138 18-108 (117)
76 1m5z_A GRIP, AMPA receptor int 99.3 1.8E-11 6E-16 103.0 12.1 81 50-130 6-90 (91)
77 2vwr_A Ligand of NUMB protein 99.3 1.4E-11 4.8E-16 104.5 11.5 82 51-132 4-90 (95)
78 2eeg_A PDZ and LIM domain prot 99.3 8.5E-12 2.9E-16 105.7 9.9 82 50-131 8-91 (94)
79 1wha_A KIAA0147 protein, scrib 99.3 8.1E-12 2.8E-16 108.1 10.0 84 49-132 6-99 (105)
80 2jil_A GRIP1 protein, glutamat 99.3 1.1E-11 3.7E-16 105.6 10.4 81 52-132 5-93 (97)
81 4amh_A Disks large homolog 1; 99.3 1.7E-11 5.7E-16 106.4 11.6 75 59-133 12-94 (106)
82 4e34_A Golgi-associated PDZ an 99.3 1.8E-11 6E-16 102.0 11.3 80 50-129 2-86 (87)
83 1wg6_A Hypothetical protein (r 99.3 5.7E-12 1.9E-16 113.1 8.8 95 38-132 9-123 (127)
84 2ego_A General receptor for ph 99.3 2.1E-11 7E-16 103.7 11.9 81 49-129 3-94 (96)
85 3qe1_A Sorting nexin-27, G pro 99.3 2.1E-11 7.2E-16 105.8 12.2 84 49-132 5-103 (107)
86 1wf7_A Enigma homologue protei 99.3 1E-11 3.4E-16 107.1 9.9 89 49-137 4-94 (103)
87 1mfg_A ERB-B2 interacting prot 99.3 1.9E-11 6.4E-16 103.7 11.1 79 52-131 5-93 (95)
88 3stj_A Protease DEGQ; serine p 99.3 2.3E-12 7.9E-17 135.4 6.6 132 7-139 171-330 (345)
89 1um1_A KIAA1849 protein, RSGI 99.3 1.7E-11 5.9E-16 106.9 11.2 87 49-135 7-100 (110)
90 1tp5_A Presynaptic density pro 99.3 1.7E-11 5.8E-16 108.5 11.3 87 48-134 12-101 (119)
91 1wf8_A Neurabin-I; PDZ domain, 99.3 1E-11 3.4E-16 107.9 9.4 82 51-132 10-101 (107)
92 2koj_A Partitioning defective 99.3 3.1E-11 1E-15 105.5 12.5 91 43-133 2-103 (111)
93 2d90_A PDZ domain containing p 99.3 1.5E-11 5E-16 105.8 10.2 85 48-132 4-90 (102)
94 2dls_A PDZ-rhogef, RHO guanine 99.3 2.7E-11 9.1E-16 102.4 11.6 82 48-132 6-88 (93)
95 3o46_A Maguk P55 subfamily mem 99.3 2.5E-11 8.7E-16 102.5 11.4 82 50-131 4-88 (93)
96 2kv8_A RGS12, regulator of G-p 99.3 4.9E-12 1.7E-16 104.5 6.7 80 49-130 1-81 (83)
97 2q9v_A Membrane-associated gua 99.3 1.4E-11 4.7E-16 103.4 9.5 80 51-130 3-88 (90)
98 1nf3_C PAR-6B; semi-CRIB motif 99.3 1.9E-11 6.7E-16 109.7 11.1 85 47-131 26-125 (128)
99 3cbz_A Dishevelled-2; PDZ doma 99.3 1.3E-11 4.3E-16 107.5 9.5 83 50-132 5-97 (108)
100 2g5m_B Neurabin-2; spinophilin 99.3 1.5E-11 5.1E-16 107.9 9.8 86 51-136 5-100 (113)
101 2db5_A INAD-like protein; PDZ 99.3 1.3E-11 4.5E-16 110.8 9.5 85 49-133 24-117 (128)
102 2iwq_A Multiple PDZ domain pro 99.3 3.3E-11 1.1E-15 107.4 12.0 92 38-132 15-120 (123)
103 1q3o_A Shank1; PDZ, GKAP, pept 99.3 3.8E-11 1.3E-15 104.6 11.9 81 50-130 7-103 (109)
104 2jre_A C60-1 PDZ domain peptid 99.3 2.8E-11 9.5E-16 105.2 11.1 81 52-132 14-105 (108)
105 2ejy_A 55 kDa erythrocyte memb 99.3 2.2E-11 7.6E-16 103.6 10.1 80 50-129 12-94 (97)
106 2fcf_A Multiple PDZ domain pro 99.3 4.2E-11 1.4E-15 103.1 12.1 83 50-132 4-100 (103)
107 2o2t_A Multiple PDZ domain pro 99.3 1.1E-11 3.8E-16 109.4 8.5 85 49-133 19-112 (117)
108 2eei_A PDZ domain-containing p 99.2 1.3E-11 4.4E-16 106.9 8.4 86 47-132 5-92 (106)
109 2qkv_A Inactivation-NO-after-p 99.2 5.2E-11 1.8E-15 101.2 11.9 80 51-131 9-91 (96)
110 2daz_A INAD-like protein; PDZ 99.2 2.7E-11 9.3E-16 108.1 10.6 85 50-134 25-114 (124)
111 1ueq_A Membrane associated gua 99.2 8.7E-11 3E-15 104.7 13.8 81 52-132 21-107 (123)
112 2i04_A Membrane-associated gua 99.2 5.5E-11 1.9E-15 98.5 11.7 77 53-129 3-85 (85)
113 2h2b_A Tight junction protein 99.2 3.6E-11 1.2E-15 104.3 10.9 82 50-132 7-98 (107)
114 1n7t_A 99-MER peptide of densi 99.2 2.4E-11 8.2E-16 104.7 9.6 81 50-131 11-101 (103)
115 2dc2_A GOPC, golgi associated 99.2 3.3E-11 1.1E-15 103.9 10.2 82 50-131 9-95 (103)
116 1q7x_A PDZ2B domain of PTP-BAS 99.2 2.2E-11 7.4E-16 105.9 9.0 85 49-133 8-104 (108)
117 2djt_A Unnamed protein product 99.2 5.3E-11 1.8E-15 102.7 11.3 83 50-132 11-99 (104)
118 2yt7_A Amyloid beta A4 precurs 99.2 7.3E-11 2.5E-15 101.3 11.8 85 47-131 6-99 (101)
119 3nfk_A Tyrosine-protein phosph 99.2 5.1E-11 1.8E-15 103.3 10.9 81 49-129 16-106 (107)
120 1v62_A KIAA1719 protein; struc 99.2 7.4E-11 2.5E-15 104.2 12.1 84 49-132 14-103 (117)
121 2csj_A TJP2 protein; PDZ domai 99.2 2.2E-11 7.6E-16 107.5 8.5 83 50-133 14-106 (117)
122 1uew_A Membrane associated gua 99.2 5.9E-11 2E-15 104.3 11.1 84 49-132 9-104 (114)
123 1ufx_A KIAA1526 protein; PDZ d 99.2 4.3E-11 1.5E-15 103.2 10.0 83 49-131 5-97 (103)
124 3ngh_A PDZ domain-containing p 99.2 5.1E-11 1.8E-15 103.1 10.4 81 51-131 2-85 (106)
125 3khf_A Microtubule-associated 99.2 4.3E-11 1.5E-15 102.3 9.7 79 54-132 6-94 (99)
126 3hpk_A Protein interacting wit 99.2 7.4E-11 2.5E-15 105.4 11.7 82 50-131 19-105 (125)
127 2gzv_A PRKCA-binding protein; 99.2 9.8E-11 3.4E-15 102.9 12.0 88 42-129 16-108 (114)
128 2la8_A Inactivation-NO-after-p 99.2 4.4E-11 1.5E-15 103.7 9.5 79 52-131 4-85 (106)
129 2e7k_A Maguk P55 subfamily mem 99.2 6E-11 2.1E-15 99.8 10.1 81 48-130 4-87 (91)
130 2vz5_A TAX1-binding protein 3; 99.2 6.9E-11 2.4E-15 107.6 11.2 87 48-134 21-127 (139)
131 1um7_A Synapse-associated prot 99.2 1.9E-11 6.6E-16 107.1 7.1 87 48-134 13-102 (113)
132 2eeh_A PDZ domain-containing p 99.2 9.3E-11 3.2E-15 100.4 11.2 83 49-132 9-95 (100)
133 3egg_C Spinophilin; PP1, serin 99.2 6.2E-11 2.1E-15 111.6 11.0 78 53-130 83-170 (170)
134 1va8_A Maguk P55 subfamily mem 99.2 1.2E-10 4.3E-15 102.0 12.2 82 50-132 25-109 (113)
135 1x6d_A Interleukin-16; PDZ dom 99.2 9.8E-11 3.3E-15 103.6 11.6 85 49-133 14-105 (119)
136 1uju_A Scribble; PDZ domain, c 99.2 1.7E-11 6E-16 107.1 6.5 83 49-131 8-104 (111)
137 2vsv_A Rhophilin-2; scaffold p 99.2 1.2E-10 4E-15 101.4 11.6 81 49-131 22-104 (109)
138 3bpu_A Membrane-associated gua 99.2 7.4E-11 2.5E-15 98.5 9.8 81 49-131 2-86 (88)
139 1uep_A Membrane associated gua 99.2 3.8E-11 1.3E-15 103.4 7.9 81 51-131 10-96 (103)
140 2jxo_A Ezrin-radixin-moesin-bi 99.2 1.4E-10 4.7E-15 98.9 11.3 84 48-131 7-93 (98)
141 2cs5_A Tyrosine-protein phosph 99.2 5E-11 1.7E-15 105.6 8.4 82 50-131 15-106 (119)
142 2z17_A Pleckstrin homology SEC 99.2 8.4E-11 2.9E-15 101.4 9.5 81 47-127 12-103 (104)
143 2iwn_A Multiple PDZ domain pro 99.2 1.5E-10 5.2E-15 98.2 11.0 79 53-131 7-93 (97)
144 1vb7_A PDZ and LIM domain 2; P 99.2 7.2E-11 2.5E-15 99.9 8.5 81 52-132 8-90 (94)
145 1wfv_A Membrane associated gua 99.2 3.4E-11 1.2E-15 103.6 6.6 88 45-132 4-97 (103)
146 2dmz_A INAD-like protein; PDZ 99.2 1.4E-10 4.7E-15 104.2 10.7 84 50-133 15-108 (129)
147 1v5q_A GRIP1 homolog, glutamat 99.2 2E-10 6.8E-15 102.2 11.7 85 48-132 13-108 (122)
148 2edp_A Fragment, shroom family 99.2 7.8E-11 2.7E-15 100.9 8.5 84 48-132 7-95 (100)
149 1wfg_A Regulating synaptic mem 99.2 5.7E-11 1.9E-15 107.1 8.0 73 60-132 48-128 (131)
150 2kpk_A Membrane-associated gua 99.1 1.2E-10 4.1E-15 104.7 10.0 80 52-131 20-105 (129)
151 1uez_A KIAA1526 protein; PDZ d 99.1 1.5E-10 5.1E-15 99.3 9.7 83 48-131 6-93 (101)
152 3soe_A Membrane-associated gua 99.1 2.5E-10 8.6E-15 99.4 11.1 83 48-133 10-95 (113)
153 3kzd_A TIAM-1, T-lymphoma inva 99.1 2.6E-10 8.8E-15 96.0 10.7 79 50-130 6-91 (94)
154 2edz_A PDZ domain-containing p 99.1 2.2E-10 7.6E-15 100.5 10.7 83 50-132 13-98 (114)
155 2xkx_A Disks large homolog 4; 99.1 3.3E-10 1.1E-14 130.4 15.0 137 140-284 99-246 (721)
156 2yuy_A RHO GTPase activating p 99.1 3.3E-11 1.1E-15 107.9 4.4 84 48-131 6-120 (126)
157 1z87_A Alpha-1-syntrophin; pro 99.1 1.1E-10 3.6E-15 117.2 8.4 84 50-133 77-165 (263)
158 3sfj_A TAX1-binding protein 3; 99.1 4.5E-10 1.5E-14 96.8 11.3 70 61-130 20-104 (104)
159 2edv_A FERM and PDZ domain-con 99.1 4.9E-11 1.7E-15 101.4 5.1 81 48-131 6-89 (96)
160 1y7n_A Amyloid beta A4 precurs 99.1 5.5E-10 1.9E-14 93.7 11.2 65 60-129 24-88 (90)
161 1x5n_A Harmonin; PDZ domain, u 99.1 5.2E-10 1.8E-14 98.1 11.4 85 48-133 13-102 (114)
162 1v5l_A PDZ and LIM domain 3; a 99.1 6E-11 2.1E-15 102.2 5.1 84 51-134 6-91 (103)
163 3e17_A Tight junction protein 99.1 3.9E-10 1.3E-14 94.2 9.9 68 60-131 13-81 (88)
164 3gge_A PDZ domain-containing p 99.1 4.2E-10 1.4E-14 94.3 9.8 82 199-283 6-91 (95)
165 1whd_A RGS3, regulator of G-pr 99.1 1.7E-10 6E-15 98.7 7.7 79 51-131 16-95 (100)
166 2lob_A Golgi-associated PDZ an 98.7 1.2E-11 4E-16 108.4 0.0 92 37-128 11-110 (112)
167 2d8i_A T-cell lymphoma invasio 99.1 3E-10 1E-14 99.7 8.8 83 49-133 14-103 (114)
168 3k1r_A Harmonin; protein-prote 99.1 4.9E-10 1.7E-14 107.8 11.1 83 49-132 83-169 (192)
169 2kjd_A Sodium/hydrogen exchang 99.1 9E-10 3.1E-14 98.6 11.5 87 47-133 6-95 (128)
170 3qo6_A Protease DO-like 1, chl 99.0 7.7E-11 2.6E-15 124.2 4.7 128 11-139 168-329 (348)
171 1ujv_A Membrane associated gua 99.0 1.5E-09 5.3E-14 92.1 11.9 81 49-132 9-92 (96)
172 1qau_A Neuronal nitric oxide s 99.0 2.1E-09 7.3E-14 93.8 12.7 87 52-138 3-94 (112)
173 2qbw_A PDZ-fibronectin fusion 99.0 1E-09 3.5E-14 105.7 11.3 69 60-129 2-80 (195)
174 3e17_A Tight junction protein 99.0 5.6E-10 1.9E-14 93.2 8.0 81 200-283 2-82 (88)
175 2l97_A HTRA, putative serine p 99.0 9.2E-10 3.2E-14 99.5 9.8 97 42-139 2-123 (134)
176 3tr0_A Guanylate kinase, GMP k 99.0 1.4E-09 4.8E-14 105.0 11.7 146 454-602 7-188 (205)
177 3cyy_A Tight junction protein 99.0 2.7E-09 9.1E-14 89.6 11.6 70 60-133 15-85 (92)
178 1wif_A RSGI RUH-020, riken cDN 99.0 6.5E-10 2.2E-14 99.1 7.9 80 50-130 27-110 (126)
179 1r6j_A Syntenin 1; PDZ, membra 99.0 1.4E-09 4.8E-14 89.2 9.1 78 198-281 4-81 (82)
180 1vae_A Rhophilin 2, rhophilin, 99.0 3.7E-10 1.3E-14 98.6 6.1 81 49-131 14-96 (111)
181 2eaq_A LIM domain only protein 99.0 1.8E-09 6.1E-14 90.3 10.0 70 61-131 18-89 (90)
182 2he4_A Na(+)/H(+) exchange reg 99.0 1.9E-09 6.6E-14 90.2 10.0 84 196-283 2-88 (90)
183 3qik_A Phosphatidylinositol 3, 99.0 2.5E-09 8.5E-14 90.5 10.5 77 52-129 19-99 (101)
184 1b8q_A Protein (neuronal nitri 99.0 9E-10 3.1E-14 98.5 8.3 90 48-137 6-100 (127)
185 2kv8_A RGS12, regulator of G-p 99.0 1.3E-09 4.5E-14 89.7 8.6 81 198-282 2-82 (83)
186 2f5y_A Regulator of G-protein 99.0 1.6E-09 5.6E-14 90.9 9.3 83 198-284 3-85 (91)
187 1te0_A Protease DEGS; two doma 99.0 4.6E-10 1.6E-14 116.8 7.0 127 11-138 153-310 (318)
188 2iwo_A Multiple PDZ domain pro 99.0 1.3E-09 4.6E-14 96.5 8.8 86 196-284 22-115 (120)
189 3soe_A Membrane-associated gua 99.0 4.2E-09 1.4E-13 91.6 11.7 83 197-285 11-96 (113)
190 1uf1_A KIAA1526 protein; PDZ d 99.0 3.7E-09 1.3E-13 94.7 11.7 87 50-137 20-110 (128)
191 1y8t_A Hypothetical protein RV 99.0 6.4E-10 2.2E-14 116.0 7.4 128 10-138 156-309 (324)
192 3lnc_A Guanylate kinase, GMP k 99.0 1.3E-09 4.5E-14 107.7 9.1 148 453-604 26-212 (231)
193 1uhp_A Hypothetical protein KI 99.0 3.4E-09 1.2E-13 91.8 10.5 87 196-285 6-104 (107)
194 1wh1_A KIAA1095 protein; PDZ d 98.9 3.5E-09 1.2E-13 94.3 10.8 83 52-136 21-112 (124)
195 2fne_A Multiple PDZ domain pro 98.9 2.4E-09 8.3E-14 94.3 9.0 84 196-283 23-114 (117)
196 1kwa_A Hcask/LIN-2 protein; PD 98.9 2.6E-09 9E-14 89.1 8.5 81 200-283 3-86 (88)
197 2rcz_A Tight junction protein 98.9 4.3E-09 1.5E-13 85.9 9.5 67 60-130 13-80 (81)
198 2dls_A PDZ-rhogef, RHO guanine 98.9 1.3E-08 4.6E-13 85.6 12.8 84 196-284 6-89 (93)
199 1i16_A Interleukin 16, LCF; cy 98.9 4E-09 1.4E-13 94.8 9.8 85 196-283 27-119 (130)
200 2d90_A PDZ domain containing p 98.9 1.1E-08 3.7E-13 87.7 11.6 86 195-284 3-91 (102)
201 2jik_A Synaptojanin-2 binding 98.9 4.8E-09 1.6E-13 89.8 9.2 84 197-284 6-99 (101)
202 2v90_A PDZ domain-containing p 98.9 5.8E-09 2E-13 88.4 9.4 83 198-284 3-91 (96)
203 2vwr_A Ligand of NUMB protein 98.9 5.8E-09 2E-13 88.2 9.4 83 198-284 3-91 (95)
204 1wha_A KIAA0147 protein, scrib 98.9 7.4E-09 2.5E-13 89.3 10.2 85 196-284 5-100 (105)
205 1uep_A Membrane associated gua 98.9 4.5E-09 1.5E-13 90.4 8.6 86 196-285 7-99 (103)
206 1g9o_A NHE-RF; PDZ domain, com 98.9 1.2E-08 4.1E-13 85.4 11.0 81 198-282 3-86 (91)
207 3gsl_A Disks large homolog 4; 98.9 7.8E-09 2.7E-13 99.1 11.2 73 60-132 111-191 (196)
208 2krg_A Na(+)/H(+) exchange reg 98.9 2E-09 6.9E-14 105.1 6.9 85 47-131 6-93 (216)
209 1n7e_A AMPA receptor interacti 98.9 1E-08 3.4E-13 87.1 10.3 85 197-285 4-93 (97)
210 3o46_A Maguk P55 subfamily mem 98.9 7.9E-09 2.7E-13 87.0 9.5 81 199-283 5-89 (93)
211 2awx_A Synapse associated prot 98.9 7.7E-09 2.6E-13 89.2 9.6 83 198-284 3-95 (105)
212 1ujv_A Membrane associated gua 98.9 3E-08 1E-12 84.1 13.0 84 195-284 7-93 (96)
213 2edv_A FERM and PDZ domain-con 98.9 5.7E-09 2E-13 88.5 8.5 84 195-283 5-90 (96)
214 2yub_A LIMK-2, LIM domain kina 98.9 8.3E-09 2.9E-13 91.0 9.7 63 71-133 43-107 (118)
215 2opg_A Multiple PDZ domain pro 98.9 1.3E-08 4.6E-13 86.4 10.7 83 198-284 4-92 (98)
216 1d5g_A Human phosphatase HPTP1 98.9 1.6E-08 5.3E-13 85.6 10.9 82 198-283 5-94 (96)
217 2jil_A GRIP1 protein, glutamat 98.9 8E-09 2.7E-13 87.6 9.1 82 199-284 4-94 (97)
218 2vsp_A PDZ domain-containing p 98.9 3.2E-09 1.1E-13 89.0 6.5 82 198-283 3-87 (91)
219 2d92_A INAD-like protein; PDZ 98.8 8.6E-09 2.9E-13 89.4 9.3 83 197-283 14-106 (108)
220 3r0h_A INAD, inactivation-NO-a 98.8 1.1E-08 3.6E-13 99.3 10.9 72 60-132 125-197 (206)
221 2djt_A Unnamed protein product 98.8 1.2E-08 4.2E-13 87.7 10.1 86 196-285 9-101 (104)
222 2i1n_A Discs, large homolog 3; 98.8 1.1E-08 3.7E-13 87.7 9.5 83 198-284 4-96 (102)
223 2fe5_A Presynaptic protein SAP 98.8 1.2E-08 4.2E-13 85.9 9.7 81 198-282 3-93 (94)
224 2uzc_A Human pdlim5, PDZ and L 98.8 1.5E-08 5.2E-13 84.2 10.1 79 199-282 4-86 (88)
225 2q9v_A Membrane-associated gua 98.8 6.1E-09 2.1E-13 87.0 7.6 79 199-281 3-88 (90)
226 1um1_A KIAA1849 protein, RSGI 98.8 1.6E-08 5.3E-13 88.0 10.4 85 195-283 5-97 (110)
227 2dkr_A LIN-7 homolog B; LIN-7B 98.8 1.1E-08 3.9E-13 85.9 9.3 82 198-283 5-91 (93)
228 3axa_A Afadin, nectin-3, prote 98.8 1.6E-08 5.5E-13 87.3 10.2 85 195-284 8-100 (106)
229 3r68_A Na(+)/H(+) exchange reg 98.8 1E-08 3.4E-13 86.6 8.7 83 197-283 4-89 (95)
230 1wf8_A Neurabin-I; PDZ domain, 98.8 9.1E-09 3.1E-13 89.0 8.6 85 197-285 8-103 (107)
231 1m5z_A GRIP, AMPA receptor int 98.8 1.6E-08 5.6E-13 84.6 9.9 80 198-281 6-90 (91)
232 1qav_A Alpha-1 syntrophin (res 98.8 1.5E-08 5.1E-13 84.7 9.6 79 198-280 4-88 (90)
233 2pa1_A PDZ and LIM domain prot 98.8 1.8E-08 6E-13 83.7 9.8 71 208-282 11-85 (87)
234 2yt7_A Amyloid beta A4 precurs 98.8 3.9E-08 1.3E-12 84.1 12.1 80 198-281 9-98 (101)
235 2ego_A General receptor for ph 98.8 2E-08 6.8E-13 85.1 10.2 80 198-281 4-95 (96)
236 3i4w_A Disks large homolog 4; 98.8 1.7E-08 5.7E-13 86.7 9.8 83 196-282 9-95 (104)
237 1rgw_A ZAsp protein; PDZ, cyph 98.8 1.1E-08 3.8E-13 84.4 8.4 78 200-282 3-84 (85)
238 1uew_A Membrane associated gua 98.8 2.6E-08 8.7E-13 87.2 11.1 85 196-285 8-106 (114)
239 1ujd_A KIAA0559 protein; PDZ d 98.8 1.3E-08 4.5E-13 89.6 9.2 83 198-284 12-111 (117)
240 2ehr_A INAD-like protein; PDZ 98.8 3.5E-08 1.2E-12 86.7 11.9 83 198-284 15-112 (117)
241 3b76_A E3 ubiquitin-protein li 98.8 1.3E-08 4.3E-13 89.9 8.9 80 198-281 24-112 (118)
242 1v62_A KIAA1719 protein; struc 98.8 1.6E-08 5.5E-13 89.0 9.5 86 196-285 13-105 (117)
243 3bpu_A Membrane-associated gua 98.8 3.6E-08 1.2E-12 81.9 11.2 79 198-282 3-86 (88)
244 3cyy_A Tight junction protein 98.8 1.7E-08 5.7E-13 84.6 9.1 81 199-283 3-84 (92)
245 2byg_A Channel associated prot 98.8 1.3E-08 4.6E-13 89.6 8.9 81 198-282 24-114 (117)
246 1ueq_A Membrane associated gua 98.8 3.1E-08 1.1E-12 88.0 11.3 85 196-284 17-108 (123)
247 2dc2_A GOPC, golgi associated 98.8 1.4E-08 4.7E-13 87.3 8.7 81 199-283 10-96 (103)
248 2i04_A Membrane-associated gua 98.8 1.8E-08 6.3E-13 83.1 9.1 77 200-280 2-85 (85)
249 3l4f_D SH3 and multiple ankyri 98.8 3.3E-08 1.1E-12 89.0 11.5 85 196-284 25-126 (132)
250 1mfg_A ERB-B2 interacting prot 98.8 5.1E-08 1.7E-12 82.3 11.9 77 200-282 5-93 (95)
251 4e34_A Golgi-associated PDZ an 98.8 1.6E-08 5.5E-13 83.9 8.6 78 199-280 3-86 (87)
252 1y7n_A Amyloid beta A4 precurs 98.8 2.1E-08 7E-13 84.0 9.1 80 197-281 10-89 (90)
253 1nf3_C PAR-6B; semi-CRIB motif 98.8 1.6E-08 5.5E-13 90.5 9.0 83 197-283 28-126 (128)
254 2qg1_A Multiple PDZ domain pro 98.8 2.5E-08 8.5E-13 83.6 9.6 81 198-282 4-89 (92)
255 2vsv_A Rhophilin-2; scaffold p 98.8 1.9E-08 6.5E-13 87.3 9.0 81 199-283 24-105 (109)
256 2r4h_A Membrane-associated gua 98.8 2.4E-08 8.3E-13 87.1 9.8 82 197-282 23-109 (112)
257 3cbz_A Dishevelled-2; PDZ doma 98.8 1.2E-08 4.1E-13 88.5 7.7 83 198-284 5-98 (108)
258 2eno_A Synaptojanin-2-binding 98.8 1.7E-08 5.8E-13 89.3 8.7 83 198-284 17-109 (120)
259 1wg6_A Hypothetical protein (r 98.8 1.1E-08 3.9E-13 91.4 7.7 82 199-284 26-124 (127)
260 1wi2_A Riken cDNA 2700099C19; 98.8 2.7E-08 9.3E-13 85.5 9.7 83 197-284 14-101 (104)
261 2dlu_A INAD-like protein; PDZ 98.8 2.1E-08 7.2E-13 87.3 9.1 83 198-284 15-100 (111)
262 3egg_C Spinophilin; PP1, serin 98.8 1.9E-08 6.5E-13 94.5 9.4 81 198-281 80-170 (170)
263 3khf_A Microtubule-associated 98.8 1.7E-08 5.8E-13 86.0 8.3 79 201-283 5-94 (99)
264 1wi4_A Synip, syntaxin binding 98.8 3.4E-08 1.2E-12 85.8 10.3 83 196-283 13-106 (109)
265 2q3g_A PDZ and LIM domain prot 98.8 2.5E-08 8.4E-13 83.2 9.0 80 199-283 4-87 (89)
266 1ihj_A INAD; intermolecular di 98.8 2.2E-08 7.4E-13 85.1 8.8 80 199-282 6-97 (98)
267 3qe1_A Sorting nexin-27, G pro 98.8 3.4E-08 1.2E-12 85.4 10.1 82 198-283 6-103 (107)
268 1uju_A Scribble; PDZ domain, c 98.8 6.5E-09 2.2E-13 90.6 5.5 86 196-285 7-107 (111)
269 2g5m_B Neurabin-2; spinophilin 98.8 1.5E-08 5E-13 88.6 7.6 83 198-284 4-97 (113)
270 2cs5_A Tyrosine-protein phosph 98.7 2.7E-08 9.4E-13 87.7 9.5 85 196-283 13-107 (119)
271 2jre_A C60-1 PDZ domain peptid 98.7 1.9E-08 6.3E-13 87.2 8.1 84 196-283 10-105 (108)
272 1q7x_A PDZ2B domain of PTP-BAS 98.7 1.9E-08 6.5E-13 87.1 8.1 84 197-284 8-104 (108)
273 2la8_A Inactivation-NO-after-p 98.7 6.3E-08 2.1E-12 83.6 11.3 81 199-283 3-86 (106)
274 2ejy_A 55 kDa erythrocyte memb 98.7 1.8E-08 6.1E-13 85.6 7.6 79 199-281 13-95 (97)
275 2daz_A INAD-like protein; PDZ 98.7 2.9E-08 9.8E-13 88.3 9.4 82 198-283 25-112 (124)
276 1whd_A RGS3, regulator of G-pr 98.7 1.4E-08 4.9E-13 86.7 7.1 83 197-283 14-96 (100)
277 1x5q_A LAP4 protein; PDZ domai 98.7 5.5E-08 1.9E-12 84.5 10.8 86 195-284 12-107 (110)
278 2kpk_A Membrane-associated gua 98.7 4.4E-08 1.5E-12 87.8 10.3 86 196-285 16-108 (129)
279 3ngh_A PDZ domain-containing p 98.7 2.5E-08 8.6E-13 86.0 8.4 80 200-283 3-86 (106)
280 1z6g_A Guanylate kinase; struc 98.7 1.5E-07 5.1E-12 92.2 14.5 149 453-604 22-211 (218)
281 1va8_A Maguk P55 subfamily mem 98.7 5.1E-08 1.8E-12 85.2 9.9 83 198-284 25-110 (113)
282 2pkt_A PDZ and LIM domain prot 98.7 5.6E-08 1.9E-12 81.3 9.7 80 200-284 5-88 (91)
283 1ufx_A KIAA1526 protein; PDZ d 98.7 3.5E-08 1.2E-12 84.8 8.5 85 198-285 6-100 (103)
284 2eei_A PDZ domain-containing p 98.7 1.5E-08 5.2E-13 87.4 6.3 84 196-283 6-92 (106)
285 2qt5_A Glutamate receptor-inte 98.7 4.9E-08 1.7E-12 94.2 10.5 73 60-132 117-196 (200)
286 1wfv_A Membrane associated gua 98.7 1.4E-08 4.8E-13 87.1 5.8 86 196-285 9-99 (103)
287 2koj_A Partitioning defective 98.7 6.8E-08 2.3E-12 84.0 10.2 85 196-284 9-103 (111)
288 2o2t_A Multiple PDZ domain pro 98.7 2.7E-08 9.3E-13 87.4 7.7 82 198-283 20-111 (117)
289 1wfg_A Regulating synaptic mem 98.7 4.2E-08 1.4E-12 88.1 8.9 60 220-283 66-128 (131)
290 2db5_A INAD-like protein; PDZ 98.7 3.9E-08 1.3E-12 88.0 8.6 83 198-284 25-117 (128)
291 4amh_A Disks large homolog 1; 98.7 4.4E-08 1.5E-12 84.6 8.7 73 207-283 11-93 (106)
292 2eeg_A PDZ and LIM domain prot 98.7 5E-08 1.7E-12 82.2 8.8 81 198-283 8-92 (94)
293 2rcz_A Tight junction protein 98.7 4.6E-08 1.6E-12 79.7 8.3 74 204-281 6-80 (81)
294 1n7t_A 99-MER peptide of densi 98.7 1.1E-07 3.8E-12 81.5 11.0 80 197-282 10-101 (103)
295 2w4f_A Protein LAP4; structura 98.7 7.1E-08 2.4E-12 81.6 9.6 81 199-283 4-94 (97)
296 1lcy_A HTRA2 serine protease; 98.7 2.8E-08 9.7E-13 103.5 8.4 120 10-138 160-319 (325)
297 2h2b_A Tight junction protein 98.7 1.8E-07 6.2E-12 80.7 12.2 83 197-284 6-99 (107)
298 1z87_A Alpha-1-syntrophin; pro 98.7 2.6E-08 8.7E-13 99.9 7.6 86 197-285 76-166 (263)
299 2dm8_A INAD-like protein; PDZ 98.7 4.4E-08 1.5E-12 85.9 8.0 84 198-285 17-106 (116)
300 1q3o_A Shank1; PDZ, GKAP, pept 98.7 9.7E-08 3.3E-12 82.8 10.0 61 220-284 46-106 (109)
301 2i6v_A General secretion pathw 98.7 4.1E-08 1.4E-12 81.5 7.3 73 61-133 6-80 (87)
302 2eeh_A PDZ domain-containing p 98.7 8E-08 2.7E-12 81.9 9.2 83 198-285 10-97 (100)
303 2pzd_A Serine protease HTRA2; 98.6 1.1E-07 3.7E-12 83.0 10.1 65 71-138 34-98 (113)
304 2qkv_A Inactivation-NO-after-p 98.6 1.3E-07 4.6E-12 79.9 10.4 82 196-282 6-91 (96)
305 3nfk_A Tyrosine-protein phosph 98.6 7.1E-08 2.4E-12 83.3 8.8 80 198-281 17-107 (107)
306 2jxo_A Ezrin-radixin-moesin-bi 98.6 6.3E-08 2.2E-12 82.2 8.3 81 198-282 9-93 (98)
307 2kom_A Partitioning defective 98.6 1.3E-07 4.4E-12 83.7 10.4 83 196-282 28-120 (121)
308 2yuy_A RHO GTPase activating p 98.6 1.3E-08 4.6E-13 90.7 3.9 62 219-284 61-122 (126)
309 2csj_A TJP2 protein; PDZ domai 98.6 5.5E-08 1.9E-12 85.5 7.8 81 198-283 14-105 (117)
310 1tp5_A Presynaptic density pro 98.6 1E-07 3.5E-12 84.0 9.4 83 196-282 12-98 (119)
311 2iwn_A Multiple PDZ domain pro 98.6 7.4E-08 2.5E-12 81.4 8.2 80 199-282 5-93 (97)
312 2fcf_A Multiple PDZ domain pro 98.6 1.7E-07 6E-12 80.2 10.3 61 219-283 39-100 (103)
313 1vb7_A PDZ and LIM domain 2; P 98.6 1E-07 3.5E-12 80.3 8.6 61 220-284 31-91 (94)
314 3i18_A LMO2051 protein; alpha- 98.6 8.5E-08 2.9E-12 81.8 7.7 68 71-139 6-73 (100)
315 2e7k_A Maguk P55 subfamily mem 98.6 7.5E-08 2.6E-12 80.7 7.2 79 199-282 7-88 (91)
316 1wf7_A Enigma homologue protei 98.6 8.6E-08 3E-12 82.2 7.7 82 198-284 5-90 (103)
317 2dmz_A INAD-like protein; PDZ 98.6 1.1E-07 3.9E-12 85.0 8.5 85 196-284 13-108 (129)
318 1p1d_A PDZ45, glutamate recept 98.6 1.8E-07 6E-12 90.0 10.4 80 52-131 109-195 (196)
319 3hpk_A Protein interacting wit 98.6 1.8E-07 6.2E-12 83.2 9.6 80 199-282 20-105 (125)
320 2p3w_A Probable serine proteas 98.6 1.1E-07 3.6E-12 82.9 7.9 65 71-138 34-98 (112)
321 1um7_A Synapse-associated prot 98.6 1E-07 3.5E-12 83.1 7.7 84 195-282 12-99 (113)
322 1wif_A RSGI RUH-020, riken cDN 98.6 2E-07 6.7E-12 83.0 9.5 80 198-281 27-110 (126)
323 1v5q_A GRIP1 homolog, glutamat 98.6 1.6E-07 5.4E-12 83.3 8.7 84 197-284 14-109 (122)
324 2edz_A PDZ domain-containing p 98.6 2.1E-07 7E-12 81.4 9.3 82 198-283 13-98 (114)
325 2kjp_A Uncharacterized protein 98.6 2E-08 6.7E-13 84.3 2.5 64 73-139 2-67 (91)
326 2kl1_A YLBL protein; structure 98.5 7.7E-08 2.6E-12 81.2 6.0 68 71-139 4-71 (94)
327 1v6b_A Harmonin isoform A1; st 98.5 1.9E-07 6.6E-12 82.2 8.8 71 209-282 28-107 (118)
328 2i4s_A General secretion pathw 98.5 2.9E-07 9.9E-12 79.3 9.5 74 61-134 24-99 (105)
329 2iwq_A Multiple PDZ domain pro 98.5 3.6E-07 1.2E-11 81.1 10.3 61 219-283 59-120 (123)
330 1uit_A Human discs large 5 pro 98.5 3E-07 1E-11 80.7 9.8 83 198-284 19-103 (117)
331 3id1_A Regulator of sigma E pr 98.5 2.4E-07 8.3E-12 78.2 8.1 59 74-132 4-62 (95)
332 3k1r_A Harmonin; protein-prote 98.5 2.6E-07 8.8E-12 88.6 9.3 82 197-283 83-169 (192)
333 1x6d_A Interleukin-16; PDZ dom 98.5 2.9E-07 1E-11 81.0 8.9 82 199-284 16-105 (119)
334 1v5l_A PDZ and LIM domain 3; a 98.5 1.5E-07 5.1E-12 80.7 6.8 72 209-284 15-90 (103)
335 3num_A Serine protease HTRA1; 98.5 1.8E-08 6.3E-13 105.2 0.9 117 13-138 162-317 (332)
336 1vae_A Rhophilin 2, rhophilin, 98.5 7.7E-08 2.6E-12 83.8 4.6 81 200-284 17-98 (111)
337 2gzv_A PRKCA-binding protein; 98.5 6.8E-07 2.3E-11 78.1 10.7 80 198-281 24-109 (114)
338 1fc6_A Photosystem II D1 prote 98.5 1.2E-07 3.9E-12 101.3 6.6 98 35-132 57-160 (388)
339 1uez_A KIAA1526 protein; PDZ d 98.5 1.6E-07 5.4E-12 80.2 5.7 83 198-285 8-96 (101)
340 2kjd_A Sodium/hydrogen exchang 98.5 4.5E-07 1.5E-11 80.9 8.9 83 196-282 7-93 (128)
341 2vz5_A TAX1-binding protein 3; 98.4 3.1E-07 1.1E-11 83.3 7.7 62 219-284 64-126 (139)
342 2lob_A Golgi-associated PDZ an 97.8 2.3E-08 7.9E-13 87.3 0.0 78 199-280 28-111 (112)
343 2z17_A Pleckstrin homology SEC 98.4 3.8E-07 1.3E-11 78.3 7.6 77 198-278 15-103 (104)
344 3tsv_A Tight junction protein 98.4 7.6E-07 2.6E-11 79.1 9.7 71 209-283 39-113 (124)
345 3kzd_A TIAM-1, T-lymphoma inva 98.4 4.1E-07 1.4E-11 76.3 7.3 76 199-280 7-90 (94)
346 2eaq_A LIM domain only protein 98.4 6.7E-07 2.3E-11 74.4 8.5 79 200-282 5-89 (90)
347 1x5n_A Harmonin; PDZ domain, u 98.4 2.1E-06 7.3E-11 74.8 12.0 81 196-281 13-98 (114)
348 1qau_A Neuronal nitric oxide s 98.4 9.4E-07 3.2E-11 76.8 9.6 81 200-284 3-89 (112)
349 2zpm_A Regulator of sigma E pr 98.4 2.9E-07 9.8E-12 76.9 5.8 65 73-138 5-69 (91)
350 2j41_A Guanylate kinase; GMP, 98.4 9.3E-07 3.2E-11 85.0 10.2 146 453-602 5-188 (207)
351 2edp_A Fragment, shroom family 98.4 2.7E-07 9.4E-12 78.6 5.7 60 220-284 36-96 (100)
352 2d8i_A T-cell lymphoma invasio 98.4 8.4E-07 2.9E-11 77.5 8.4 80 198-283 15-102 (114)
353 2qbw_A PDZ-fibronectin fusion 98.3 2.1E-06 7.2E-11 82.2 11.3 57 219-280 24-80 (195)
354 3sfj_A TAX1-binding protein 3; 98.3 9.8E-07 3.3E-11 75.6 7.9 59 219-281 45-104 (104)
355 3qik_A Phosphatidylinositol 3, 98.3 1.5E-06 5E-11 73.5 8.3 66 211-280 28-99 (101)
356 3shw_A Tight junction protein 98.3 1.3E-06 4.6E-11 94.4 9.3 79 200-283 3-85 (468)
357 1b8q_A Protein (neuronal nitri 98.3 1.5E-06 5.1E-11 77.4 7.9 84 197-284 7-96 (127)
358 2yub_A LIMK-2, LIM domain kina 98.3 2.6E-06 9E-11 74.9 9.2 63 219-285 44-108 (118)
359 2krg_A Na(+)/H(+) exchange reg 98.3 4.6E-07 1.6E-11 88.3 4.3 84 196-283 7-94 (216)
360 1uf1_A KIAA1526 protein; PDZ d 98.2 5.8E-06 2E-10 73.7 10.9 61 220-285 47-107 (128)
361 1wh1_A KIAA1095 protein; PDZ d 98.2 1.2E-06 4E-11 77.8 5.8 78 201-284 22-109 (124)
362 1w9e_A Syntenin 1; cell adhesi 98.2 6.3E-06 2.2E-10 76.9 11.1 72 52-128 90-163 (166)
363 2hga_A Conserved protein MTH13 98.2 2.6E-06 8.9E-11 75.6 7.7 62 69-132 22-83 (125)
364 4fgm_A Aminopeptidase N family 98.2 2.9E-06 1E-10 95.0 9.2 79 60-140 485-563 (597)
365 3tsz_A Tight junction protein 98.1 5E-06 1.7E-10 88.5 9.5 80 199-283 10-93 (391)
366 3rle_A Golgi reassembly-stacki 98.1 5.7E-06 2E-10 80.3 9.0 71 60-132 95-171 (209)
367 3k50_A Putative S41 protease; 98.1 3.4E-06 1.2E-10 89.9 7.0 69 61-132 75-147 (403)
368 2kjp_A Uncharacterized protein 98.0 4.5E-06 1.6E-10 69.7 4.4 57 220-283 2-60 (91)
369 3suz_A Amyloid beta A4 precurs 98.0 9.8E-07 3.4E-11 94.0 0.0 65 60-129 308-372 (388)
370 3i18_A LMO2051 protein; alpha- 97.9 2.5E-05 8.5E-10 66.3 8.4 58 219-283 7-66 (100)
371 2l97_A HTRA, putative serine p 97.9 2E-05 6.8E-10 70.8 8.0 59 218-283 56-116 (134)
372 2kl1_A YLBL protein; structure 97.9 1.8E-05 6.3E-10 66.4 6.5 58 219-283 5-64 (94)
373 1gvn_B Zeta; postsegregational 97.9 3.3E-06 1.1E-10 86.1 2.1 151 453-604 32-232 (287)
374 4a8c_A Periplasmic PH-dependen 97.8 3.5E-05 1.2E-09 83.3 9.5 65 72-138 363-427 (436)
375 2pzd_A Serine protease HTRA2; 97.8 2.5E-05 8.5E-10 67.8 6.2 58 219-283 35-92 (113)
376 3pv2_A DEGQ; trypsin fold, PDZ 97.8 2.7E-05 9.3E-10 84.4 7.6 61 72-134 386-446 (451)
377 2i6v_A General secretion pathw 97.8 2.3E-05 7.8E-10 64.7 5.3 58 220-283 20-79 (87)
378 3id1_A Regulator of sigma E pr 97.8 3.6E-05 1.2E-09 64.7 6.1 56 222-283 5-62 (95)
379 2p3w_A Probable serine proteas 97.7 4.3E-05 1.5E-09 66.2 5.4 58 219-283 35-92 (112)
380 2zpm_A Regulator of sigma E pr 97.6 4.1E-05 1.4E-09 63.5 4.7 57 221-283 6-63 (91)
381 1te0_A Protease DEGS; two doma 97.5 0.00031 1E-08 72.6 10.8 67 211-283 236-304 (318)
382 1k32_A Tricorn protease; prote 97.5 0.00012 4E-09 87.8 8.2 93 34-131 712-815 (1045)
383 2i4s_A General secretion pathw 97.5 6.8E-05 2.3E-09 64.2 4.4 47 235-283 49-97 (105)
384 2hga_A Conserved protein MTH13 97.5 0.0002 6.8E-09 63.4 7.2 57 219-283 25-83 (125)
385 3stj_A Protease DEGQ; serine p 97.4 0.00015 5.1E-09 75.8 5.8 65 213-283 257-323 (345)
386 2ege_A Uncharacterized protein 97.3 0.00012 4.1E-09 58.6 3.6 59 312-384 6-67 (75)
387 2ed1_A 130 kDa phosphatidylino 97.2 0.00025 8.4E-09 56.8 4.5 57 312-384 9-65 (76)
388 2csi_A RIM-BP2, RIM binding pr 97.2 0.00027 9.1E-09 56.6 4.7 60 312-384 6-67 (76)
389 1y8t_A Hypothetical protein RV 97.2 0.001 3.5E-08 68.8 9.3 59 219-283 242-303 (324)
390 2rqv_A BUD emergence protein 1 97.1 0.0002 6.8E-09 61.6 2.8 58 311-384 3-60 (108)
391 2lx7_A GAS-7, growth arrest-sp 97.1 0.00035 1.2E-08 53.3 3.8 53 314-383 4-56 (60)
392 1znw_A Guanylate kinase, GMP k 97.1 0.0052 1.8E-07 58.8 12.8 145 452-599 18-200 (207)
393 1ky9_A Protease DO, DEGP, HTRA 97.1 8.7E-05 3E-09 80.4 0.0 70 62-133 372-442 (448)
394 1lcy_A HTRA2 serine protease; 97.1 0.00052 1.8E-08 71.0 5.9 58 219-283 256-313 (325)
395 1fc6_A Photosystem II D1 prote 97.0 0.0012 4.2E-08 69.9 8.3 61 219-283 99-160 (388)
396 2lj0_A Sorbin and SH3 domain-c 97.0 0.00029 9.8E-09 54.7 2.1 54 313-383 6-59 (65)
397 2b86_A Cytoplasmic protein NCK 97.0 0.00043 1.5E-08 54.0 3.1 53 313-384 4-56 (67)
398 1b07_A Protein (proto-oncogene 96.9 0.00035 1.2E-08 54.2 2.3 54 313-384 3-56 (65)
399 1aww_A ATK, AMGX1, BPK, bruton 96.8 0.0011 3.7E-08 51.5 4.4 55 312-384 7-61 (67)
400 2d8j_A FYN-related kinase; SH3 96.8 0.00078 2.7E-08 53.9 3.4 60 312-384 6-68 (77)
401 1tg0_A BBC1 protein, myosin ta 96.8 0.00055 1.9E-08 53.4 2.4 59 311-383 5-63 (68)
402 1awj_A ITK; transferase, regul 96.8 0.0014 4.8E-08 52.5 4.8 55 312-384 19-73 (77)
403 2eqi_A Phospholipase C, gamma 96.7 0.0014 4.9E-08 51.2 4.1 55 312-384 6-60 (69)
404 2kgt_A Tyrosine-protein kinase 96.6 0.0016 5.4E-08 51.3 4.3 59 312-384 9-67 (72)
405 2ke9_A Caskin-2; SH3 domain, A 96.6 0.0012 4.2E-08 53.8 3.7 59 312-383 17-76 (83)
406 2k2m_A EPS8-like protein 1; al 96.6 0.00099 3.4E-08 52.0 2.9 54 312-384 7-60 (68)
407 1cka_A C-CRK N-terminal SH3 do 96.6 0.00076 2.6E-08 50.5 2.1 51 315-383 3-53 (57)
408 1wie_A RIM binding protein 2; 96.6 0.0015 5.2E-08 54.7 4.2 60 312-384 16-77 (96)
409 2dlp_A KIAA1783 protein; SH3 d 96.6 0.0013 4.6E-08 53.7 3.6 54 312-384 7-62 (85)
410 3qo6_A Protease DO-like 1, chl 96.6 0.0014 4.6E-08 68.6 4.4 59 219-283 251-322 (348)
411 2fei_A CD2-associated protein; 96.6 0.0015 5.1E-08 50.5 3.5 51 315-384 3-53 (65)
412 2dmo_A Neutrophil cytosol fact 96.5 0.0017 5.9E-08 50.6 3.8 53 312-383 6-58 (68)
413 3num_A Serine protease HTRA1; 96.5 0.0004 1.4E-08 72.1 0.0 59 219-284 254-312 (332)
414 1k4u_S Phagocyte NADPH oxidase 96.5 0.0017 5.8E-08 49.5 3.4 52 313-383 5-56 (62)
415 2iim_A Proto-oncogene tyrosine 96.5 0.0013 4.4E-08 50.2 2.7 54 312-383 5-58 (62)
416 2ysq_A RHO guanine nucleotide 96.5 0.002 6.7E-08 52.2 3.9 54 312-384 9-62 (81)
417 4fgm_A Aminopeptidase N family 96.5 0.0021 7.3E-08 71.8 5.5 65 212-283 486-555 (597)
418 2egc_A SH3 and PX domain-conta 96.5 0.002 6.7E-08 51.4 3.7 56 313-384 10-65 (75)
419 1uhc_A KIAA1010 protein; beta 96.5 0.0021 7.2E-08 51.7 3.9 58 312-384 12-69 (79)
420 2gqi_A RAS GTPase-activating p 96.4 0.0024 8.3E-08 50.2 4.2 55 313-384 7-62 (71)
421 2kym_A BUD emergence protein 1 96.4 0.00087 3E-08 58.8 1.7 56 313-384 3-58 (120)
422 1wxt_A Hypothetical protein FL 96.4 0.0016 5.3E-08 50.8 3.0 54 312-384 6-59 (68)
423 2eyx_A V-CRK sarcoma virus CT1 96.4 0.0013 4.3E-08 51.2 2.2 55 312-383 5-59 (67)
424 1ujy_A RHO guanine nucleotide 96.4 0.0036 1.2E-07 49.9 5.0 55 311-384 8-62 (76)
425 1x2k_A OSTF1, osteoclast stimu 96.4 0.0019 6.6E-08 50.3 3.2 54 312-384 6-59 (68)
426 1hsq_A Phospholipase C-gamma ( 96.4 0.0036 1.2E-07 49.2 4.8 54 312-384 5-59 (71)
427 1x2q_A Signal transducing adap 96.4 0.0039 1.3E-07 51.3 5.1 54 312-384 16-69 (88)
428 2ak5_A RHO guanine nucleotide 96.3 0.0015 5.3E-08 50.1 2.4 53 312-383 5-57 (64)
429 1sem_A SEM-5; SRC-homology 3 ( 96.3 0.0015 5.2E-08 49.0 2.3 51 314-383 3-53 (58)
430 2jw4_A Cytoplasmic protein NCK 96.3 0.0031 1.1E-07 49.7 4.2 54 312-384 6-59 (72)
431 1wxb_A Epidermal growth factor 96.3 0.0022 7.4E-08 50.0 3.2 54 312-384 6-59 (68)
432 1i07_A Epidermal growth factor 96.3 0.0014 4.7E-08 49.7 1.9 51 315-384 3-53 (60)
433 2vwf_A Growth factor receptor- 96.3 0.0015 5.2E-08 49.0 2.1 51 314-383 3-53 (58)
434 1uj0_A Signal transducing adap 96.3 0.0017 5.8E-08 49.6 2.4 53 313-384 5-57 (62)
435 2ew3_A SH3-containing GRB2-lik 96.3 0.0015 5.2E-08 51.0 2.0 53 313-384 3-55 (68)
436 3h0h_A Proto-oncogene tyrosine 96.3 0.0019 6.6E-08 51.0 2.7 56 312-384 14-69 (73)
437 2csq_A RIM-BP2, RIM binding pr 96.3 0.00092 3.1E-08 56.2 0.7 58 313-384 17-78 (97)
438 2dil_A Proline-serine-threonin 96.3 0.0031 1E-07 49.2 3.7 54 312-384 7-60 (69)
439 2ebp_A SAM and SH3 domain-cont 96.3 0.0028 9.6E-08 50.2 3.5 53 314-383 10-62 (73)
440 2dl4_A Protein STAC; SH3 domai 96.2 0.0027 9.1E-08 49.5 3.3 53 312-383 6-58 (68)
441 2dnu_A RUH-061, SH3 multiple d 96.2 0.0038 1.3E-07 48.9 4.1 54 312-384 7-60 (71)
442 1ugv_A KIAA0621, olygophrenin- 96.2 0.0037 1.2E-07 49.3 4.0 53 313-384 10-63 (72)
443 2yuq_A Tyrosine-protein kinase 96.2 0.0019 6.5E-08 52.8 2.4 55 312-384 18-72 (85)
444 2ecz_A Sorbin and SH3 domain-c 96.2 0.002 6.9E-08 50.4 2.4 56 312-384 6-61 (70)
445 1gl5_A Tyrosine-protein kinase 96.2 0.0018 6.1E-08 50.3 2.1 53 314-384 3-55 (67)
446 1wyx_A CRK-associated substrat 96.2 0.0019 6.6E-08 50.4 2.3 52 313-383 3-57 (69)
447 1nm7_A Peroxisomal membrane pr 96.2 0.004 1.4E-07 48.8 4.0 57 314-383 8-65 (69)
448 2dl7_A KIAA0769 protein; SH3 d 96.2 0.0035 1.2E-07 49.5 3.7 57 312-384 7-63 (73)
449 2dbm_A SH3-containing GRB2-lik 96.2 0.0032 1.1E-07 49.8 3.4 54 312-384 6-59 (73)
450 3k50_A Putative S41 protease; 96.2 0.0022 7.4E-08 68.2 3.1 57 221-284 92-148 (403)
451 2dl5_A KIAA0769 protein; SH3 d 96.1 0.0031 1E-07 50.6 3.2 55 312-384 12-67 (78)
452 2nwm_A Vinexin; cell adhesion; 96.1 0.0026 8.8E-08 49.2 2.6 51 315-384 3-53 (65)
453 1zlm_A Osteoclast stimulating 96.1 0.0022 7.4E-08 48.2 2.1 52 314-384 4-55 (58)
454 2g6f_X RHO guanine nucleotide 96.1 0.0023 8E-08 48.2 2.3 52 313-383 4-55 (59)
455 2vkn_A Protein SSU81; membrane 96.1 0.0028 9.4E-08 49.7 2.8 55 313-384 5-59 (70)
456 1zx6_A YPR154WP; SH3 domain, p 96.1 0.002 6.9E-08 48.4 1.9 51 314-383 3-53 (58)
457 2dl8_A SLIT-ROBO RHO GTPase-ac 96.1 0.0024 8.2E-08 50.4 2.4 55 311-384 7-61 (72)
458 1w70_A Neutrophil cytosol fact 96.1 0.0021 7.3E-08 48.7 2.0 52 313-383 4-55 (60)
459 2cre_A HEF-like protein; SH3 d 96.1 0.0033 1.1E-07 49.3 3.2 56 312-383 6-61 (71)
460 1jo8_A ABP1P, actin binding pr 96.1 0.0022 7.4E-08 48.2 2.0 52 315-383 2-53 (58)
461 1uti_A GRB2-related adaptor pr 96.1 0.0023 7.8E-08 48.0 2.1 50 315-383 3-52 (58)
462 2ega_A SH3 and PX domain-conta 96.1 0.0046 1.6E-07 48.4 3.9 53 313-384 8-60 (70)
463 2djq_A SH3 domain containing r 96.1 0.0037 1.3E-07 48.6 3.3 54 312-384 6-59 (68)
464 2l0a_A STAM-1, signal transduc 96.0 0.0024 8.1E-08 50.5 2.1 53 312-383 16-68 (72)
465 2drm_A Acanthamoeba myosin IB; 96.0 0.0028 9.6E-08 47.5 2.4 52 313-383 3-54 (58)
466 2gnc_A SLIT-ROBO RHO GTPase-ac 96.0 0.0017 5.8E-08 49.2 1.1 53 312-383 5-57 (60)
467 1z9q_A Neutrophil cytosol fact 96.0 0.0037 1.2E-07 50.4 3.2 53 312-383 17-69 (79)
468 2xmf_A Myosin 1E SH3; motor pr 96.0 0.0027 9.4E-08 48.0 2.3 52 313-383 5-56 (60)
469 2jte_A CD2-associated protein; 96.0 0.0035 1.2E-07 48.0 2.9 53 312-383 5-59 (64)
470 1u5s_A Cytoplasmic protein NCK 96.0 0.0029 9.9E-08 49.6 2.5 54 313-384 6-61 (71)
471 3ulr_B SRC substrate cortactin 96.0 0.003 1E-07 48.5 2.5 53 312-383 8-60 (65)
472 2ydl_A SH3 domain-containing k 96.0 0.0026 9E-08 49.8 2.1 52 314-384 3-56 (69)
473 1wi7_A SH3-domain kinase bindi 96.0 0.0026 9E-08 49.5 2.0 53 312-383 6-58 (68)
474 2dbk_A CRK-like protein; struc 95.9 0.0036 1.2E-07 51.5 2.9 56 312-384 15-70 (88)
475 1uhf_A Intersectin 2; beta bar 95.9 0.0046 1.6E-07 48.3 3.4 53 312-384 7-59 (69)
476 1zuu_A BZZ1 protein; SH3 domai 95.9 0.003 1E-07 47.4 2.2 53 315-383 3-55 (58)
477 2o2o_A SH3-domain kinase-bindi 95.9 0.0059 2E-07 50.7 4.1 53 312-383 17-69 (92)
478 1wxu_A Peroxisomal biogenesis 95.9 0.007 2.4E-07 50.3 4.5 59 312-384 16-74 (93)
479 2oaw_A Spectrin alpha chain, b 95.9 0.0026 8.7E-08 48.9 1.6 57 314-383 2-60 (65)
480 3cqt_A P59-FYN, proto-oncogene 95.9 0.003 1E-07 50.9 2.0 54 314-384 6-59 (79)
481 2v1q_A SLA1, cytoskeleton asse 95.9 0.0035 1.2E-07 47.3 2.3 53 314-383 3-56 (60)
482 2cud_A SRC-like-adapter; SH3 d 95.8 0.0026 8.9E-08 51.2 1.5 54 313-384 17-70 (79)
483 2yun_A Nostrin; nitric oxide s 95.8 0.0057 1.9E-07 49.1 3.6 54 312-384 6-59 (79)
484 2fpe_A C-JUN-amino-terminal ki 95.8 0.003 1E-07 48.1 1.8 52 315-383 5-56 (62)
485 1y0m_A 1-phosphatidylinositol- 95.8 0.0038 1.3E-07 47.4 2.3 53 313-383 3-55 (61)
486 1j3t_A Intersectin 2; beta bar 95.8 0.0042 1.4E-07 49.2 2.7 53 312-384 9-61 (74)
487 1ue9_A Intersectin 2; beta bar 95.8 0.0055 1.9E-07 49.3 3.4 59 312-384 6-64 (80)
488 2ct3_A Vinexin; SH3 domian, st 95.8 0.0047 1.6E-07 48.2 2.9 56 312-384 6-61 (70)
489 1wx6_A Cytoplasmic protein NCK 95.8 0.0056 1.9E-07 50.6 3.5 54 313-384 17-72 (91)
490 2dm1_A Protein VAV-2; RHO fami 95.8 0.0071 2.4E-07 47.7 3.9 56 312-384 6-61 (73)
491 1s1n_A Nephrocystin 1; beta ba 95.8 0.0045 1.5E-07 48.1 2.6 53 313-383 10-62 (68)
492 2ekh_A SH3 and PX domain-conta 95.8 0.0051 1.7E-07 49.6 3.0 54 312-384 7-60 (80)
493 2rf0_A Mitogen-activated prote 95.8 0.0039 1.3E-07 51.5 2.3 54 312-383 28-86 (89)
494 1yn8_A NBP2, NAP1-binding prot 95.8 0.0028 9.5E-08 47.7 1.3 53 314-383 2-54 (59)
495 2i0n_A Class VII unconventiona 95.8 0.004 1.4E-07 50.2 2.3 54 312-384 9-63 (80)
496 2bzy_A CRK-like protein, CRKL 95.8 0.0032 1.1E-07 48.8 1.7 54 314-384 2-55 (67)
497 2o9s_A Ponsin; SH3 domain, sig 95.7 0.0045 1.5E-07 47.9 2.5 54 313-383 6-59 (67)
498 2k9g_A SH3 domain-containing k 95.7 0.0061 2.1E-07 48.0 3.4 53 312-383 8-62 (73)
499 2cuc_A SH3 domain containing r 95.7 0.0039 1.3E-07 48.7 2.2 56 312-384 6-61 (70)
500 2lcs_A NAP1-binding protein 2; 95.7 0.0031 1E-07 50.0 1.5 54 314-384 6-59 (73)
No 1
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=100.00 E-value=3e-69 Score=622.14 Aligned_cols=521 Identities=20% Similarity=0.325 Sum_probs=401.1
Q ss_pred CceEEEeccC-CceeEEEEccC-------CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCC
Q psy9827 50 DPRFITFQKE-GSVGIRLTGGN-------KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQ 120 (627)
Q Consensus 50 ~~r~v~l~k~-g~lG~~i~g~~-------~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g 120 (627)
+++.+.+.+. ++|||+|.||. +.|++|..|.+||||+++| |++||+|++|||.++.++++.+++.+++.++
T Consensus 59 ~~~~v~l~k~~~glGf~i~gg~~~~~~~~~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g 138 (721)
T 2xkx_A 59 EYEEITLERGNSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAG 138 (721)
T ss_pred eEEEEEEEeCCCCCCEEEeCCcCCcccCCCCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHhhccc
Confidence 5577888776 59999999974 4679999999999999999 9999999999999999999999999999889
Q ss_pred CeeEEEEEeCCccc---------------ceee---------------------ecCCCCccc-cccCCeeeccCCeecC
Q psy9827 121 DQIHLIVQNRRDEY---------------EHVV---------------------ASQRGDSFH-IKVNDRIMSANGLSLE 163 (627)
Q Consensus 121 ~~V~L~v~r~~~~~---------------~~~v---------------------~~~~~~~~~-l~~~D~i~~vng~~l~ 163 (627)
..|.|+|.|.+... ...+ .++++...+ |+.||.|++|||..+.
T Consensus 139 ~~v~l~v~R~~~~~~~~~~v~l~k~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~ 218 (721)
T 2xkx_A 139 SIVRLYVMRRKPPAEKVMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLE 218 (721)
T ss_pred cccceEEEecccccccceeeeeeeecCCCceeeccCCCccccCCCCceEEEEeCCCCchhhcCCCCCCCEEEEECCeeCC
Confidence 99999998765321 0111 111222335 9999999999999999
Q ss_pred cCChHHHHHHHhhcCCeEEEEEeecccC--------CCC--------------------------C-------CC-----
Q psy9827 164 NVEYGTAVQVLRDSGSTVTLKVRRRIVL--------PAS--------------------------P-------EP----- 197 (627)
Q Consensus 164 ~~~~~~~~~~l~~sg~~v~l~v~r~~~~--------p~~--------------------------~-------~~----- 197 (627)
++++.+++..++..+..+.|.+.|.... |.. + .+
T Consensus 219 ~~~~~~~~~~l~~~~~~v~l~V~R~g~~~~~~~~~~p~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 298 (721)
T 2xkx_A 219 DVMHEDAVAALKNTYDVVYLKVAKPSNAYLSDSYAPPDITTSYSQHLDNEISHSSYLGTDYPTAMTPTSPRRYSPVAKDL 298 (721)
T ss_pred CCCHHHHHHHHHcCCCeEEEEEEeCCcccccCCCCCCCcccCCCCCcccccCCcccccccccccCCCCCCcccCCccccc
Confidence 9999999999998888889988765211 000 0 00
Q ss_pred --------ccEEEEEeecCCCCCeeeeeC---CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHH
Q psy9827 198 --------QTLRVQLSKSRKKDDFGIILG---NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKL 266 (627)
Q Consensus 198 --------~~~~V~L~k~~~~~~~gi~~~---~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~ 266 (627)
....|.|.+...+.||.+..+ .|++|..|.+|+ .|++.|.|++||+|++|||+++.++++++++.+
T Consensus 299 ~~~~~~~~~~~~v~l~~~~~~lG~~i~~~~~~~gv~V~~V~~gs---~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~ 375 (721)
T 2xkx_A 299 LGEEDIPREPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGG---PADLSGELRKGDQILSVNGVDLRNASHEQAAIA 375 (721)
T ss_pred ccccccccceEEEEEEECCCCccEEEeccCCCCCeEEEEeCCCC---hHHhcCCCccCCEEEEECCEECCCCCHHHHHHH
Confidence 234566776644444444433 589999999873 344444499999999999999999999999999
Q ss_pred HHcCCCeEEEEEEeCCCCCCCcCCCCc-c-ccCcCCcC-CCCCCC--CCCCceeeCCCCCCCCCCCccCcCCCCCCCCCC
Q psy9827 267 IDSSKEKLSLTIRREVPRPTAYQESTT-L-PGKENNYM-DPLSTN--YSSQNLYVQPPTRGGPNNLLEDKSNLVPRAGRS 341 (627)
Q Consensus 267 l~~~~~~v~l~V~r~~~~~~~~~~~~~-~-~~~~~~~~-~~~~~~--~~~~~~yvra~~~y~~~~~~~d~~~~~~~~gl~ 341 (627)
|+..++.++|.|.|+...........+ + .++.+..+ .+.+.. .+.+++||||+|+| ++..|+.+||..+.|.
T Consensus 376 l~~~~~~v~L~v~r~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~~~~~~~~~~~vrAl~dy---~~~~d~~~p~~~LsF~ 452 (721)
T 2xkx_A 376 LKNAGQTVTIIAQYKPEEYSRFEAKIHDLREQLMNSSLGSGTASLRSNPKRGFYIRALFDY---DKTKDCGFLSQALSFR 452 (721)
T ss_pred HHhcCCeEEEEEEeCchhhhhhhhhhhhhhhhcccccccCCccccccccccceeEEEeecc---CcCCCCCCcccccccc
Confidence 999989999999987543211100000 0 00111111 112221 23468999999999 7777888887766777
Q ss_pred CCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhhHHHHHHHhhcccccccccccccccchhccccCccCCC
Q psy9827 342 RNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKARAEELATAQFNATKKELSASESRGSFFKRRRNSHRRSK 421 (627)
Q Consensus 342 ~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~~e~~~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~ 421 (627)
+||||+| ++++|. .||+|++.+..++..+.|+|||+.++|++...+.. ...| .+++ .
T Consensus 453 ~GDil~v-~~~~~~----~WW~a~~~~~~~~~~~~G~iPs~~~~e~~~~~~~~-----------~~~~-~~~~------~ 509 (721)
T 2xkx_A 453 FGDVLHV-IDAGDE----EWWQARRVHSDSETDDIGFIPSKRRVERREWSRLK-----------AKDW-GSSS------G 509 (721)
T ss_pred CCCEEEE-eecCCC----CeEEEEECCCCCccCccceeecHHHHHHHHhhhcc-----------cccc-cCcc------h
Confidence 9999999 676664 89999998766656789999999999987543211 0112 1110 0
Q ss_pred CCCccCcccccccCCCCCccccchhhccCCCCCceEEEeCccHHHHHHHHhhhCCCCcccCCC---------------CC
Q psy9827 422 SLSKDHWDDVVFGDSISKFPAYERVSLRHPGFIRPVVLFGPVADLARDKLLKDFPDKFSAPRK---------------FN 486 (627)
Q Consensus 422 ~~~~~~~d~~~~~~~~~~~~~Ye~V~~~~~~~~RpvVl~Gp~k~~l~~~Ll~~~p~~f~~~~~---------------~~ 486 (627)
...+ .+.+++||+|.++++.+.|||||+||+|++|+++|++++|+.|..+++ +|
T Consensus 510 ----~~~~-------~~~~~~Ye~V~~~~~~~~r~vvl~GP~K~tl~~~L~~~~~~~~~~~vs~TTR~~r~gE~~G~dY~ 578 (721)
T 2xkx_A 510 ----SQGR-------EDSVLSYETVTQMEVHYARPIIILGPTKDRANDDLLSEFPDKFGSCVPHTTRPKREYEIDGRDYH 578 (721)
T ss_pred ----hhcc-------cccCCCceeeecccCCCCCEEEEECCCHHHHHHHHHHhCccceeecccccccCCCCCccCCceeE
Confidence 0011 146789999999999999999999999999999999999988876332 17
Q ss_pred CC-CHHHHHHHHhccccc-----CCcee-----hHHhHHhCCCcEEEecC-Cce-eccccCCCCceeEEEEcCCCcccC-
Q psy9827 487 FI-LWATIKDTAMYQSSK-----EPGMY-----QGKDSMYQGKDSMYQGK-ESM-YQGKDSMYQGKDSMYQGKDSMYQG- 552 (627)
Q Consensus 487 Fv-s~e~f~~~i~~~~~~-----~~~~Y-----~V~~v~~~gk~ciLdi~-~~l-~~~~~~~~P~~~vIFI~ppsl~~~- 552 (627)
|| |+++|+++++.|+|+ .|||| +|++++++||+|||||+ +.+ .++..+++|+ +|||+|||+++|
T Consensus 579 Fv~s~~~f~~~i~~~~flE~~~~~g~~YGt~~~~v~~~~~~g~~~ildi~~~~~~~l~~~~~~p~--~ifi~pps~~~L~ 656 (721)
T 2xkx_A 579 FVSSREKMEKDIRAHKFIEAGQYNSHLYGTSVQSVREVAEQGKHCILDVSANAVRRLQAAHLHPI--AIFIRPRSLENVL 656 (721)
T ss_pred EecCHHHHHHHHhcCCceEEEEECCccceeeHHHHHHHHHCCCcEEEeCCHHHHHHHHhcccCCE--EEEEeCCcHHHHH
Confidence 99 999999999877654 59999 79999999999999999 555 4444589999 999999996554
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHhcCcccEEEECCCHHHHHHHHHHHHHhhCCCCeeEeCCC
Q psy9827 553 ---KDIKKEVKIKLFEQSQKLEKVWSHVFTGTITLSGVDVWYRKTRELIEKQQSSPVWISETK 612 (627)
Q Consensus 553 ---~~~~e~~~~~~~~~~~~~e~~~~~~fd~vi~n~~l~~~~~~l~~~i~~~~~~~~Wvp~~~ 612 (627)
+|.++++++++++++.++|++|.++||+||+|||+++||++|+++|.+++++|||||++.
T Consensus 657 ~l~~R~t~~~~~~rl~~a~~~e~~~~~~fd~vi~Nd~l~~a~~~l~~~i~~~~~~~~Wvp~~~ 719 (721)
T 2xkx_A 657 EINKRITEEQARKAFDRATKLEQEFTECFSAIVEGDSFEEIYHKVKRVIEDLSGPYIWVPARE 719 (721)
T ss_pred HHhccCCHHHHHHHHHHHHHHHHhccccCcEEEECcCHHHHHHHHHHHHHhccCCcEEeeccc
Confidence 677888899999999889999999999999999999999999999999999999999874
No 2
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=100.00 E-value=1.6e-57 Score=491.81 Aligned_cols=368 Identities=34% Similarity=0.556 Sum_probs=262.0
Q ss_pred ceEEEeccCCceeEEEEccCCCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhc--CCCeeEEEEE
Q psy9827 51 PRFITFQKEGSVGIRLTGGNKVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLS--LQDQIHLIVQ 128 (627)
Q Consensus 51 ~r~v~l~k~g~lG~~i~g~~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~--~g~~V~L~v~ 128 (627)
+|.|.+.+.++|||++.++++.|++|..|.+||||+++||++||+|++|||.++.++++.+++..++. +++.|+|+|.
T Consensus 2 ~r~V~l~k~~~lG~~i~gg~~~Gi~V~~V~~gspA~~aGL~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v~L~V~ 81 (468)
T 3shw_A 2 MKLVKFRKGDSVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQ 81 (468)
T ss_dssp EEEEEEECCSSCCEEEEEETTTEEEEEEECSSSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEE
T ss_pred ceEEEEecCCccceEEEccCcCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEE
Confidence 57888999889999999998899999999999999999999999999999999999999999999886 7889999888
Q ss_pred eCCcccceeeecCCCCccccccCCeeeccCCeecCcCChHHHHHHHhhcCCeEEEEEeecccCCCCCCCccEEEEEeecC
Q psy9827 129 NRRDEYEHVVASQRGDSFHIKVNDRIMSANGLSLENVEYGTAVQVLRDSGSTVTLKVRRRIVLPASPEPQTLRVQLSKSR 208 (627)
Q Consensus 129 r~~~~~~~~v~~~~~~~~~l~~~D~i~~vng~~l~~~~~~~~~~~l~~sg~~v~l~v~r~~~~p~~~~~~~~~V~L~k~~ 208 (627)
|++..+..
T Consensus 82 r~g~~~~~------------------------------------------------------------------------ 89 (468)
T 3shw_A 82 KKKDVYRR------------------------------------------------------------------------ 89 (468)
T ss_dssp ECHHHHHH------------------------------------------------------------------------
T ss_pred ECCccchh------------------------------------------------------------------------
Confidence 64321110
Q ss_pred CCCCeeeeeCCcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEEEEEEeCCCCCCCc
Q psy9827 209 KKDDFGIILGNKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPRPTAY 288 (627)
Q Consensus 209 ~~~~~gi~~~~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~l~V~r~~~~~~~~ 288 (627)
++.. .
T Consensus 90 ---------------------------------------------------------~~~~--------------~---- 94 (468)
T 3shw_A 90 ---------------------------------------------------------IVES--------------D---- 94 (468)
T ss_dssp ---------------------------------------------------------HHHH--------------T----
T ss_pred ---------------------------------------------------------hhcc--------------c----
Confidence 0000 0
Q ss_pred CCCCccccCcCCcCCCCCCCCCCCceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccC---CCCCCCCcCcccc
Q psy9827 289 QESTTLPGKENNYMDPLSTNYSSQNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQ---LDRPVSPINNSMD 365 (627)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~---~d~~~~~~wwqa~ 365 (627)
..+++||||+|+| ++.+ + .+++|.+|||||| +++ +|. .||||+
T Consensus 95 ---------------------~g~s~yVralfdy---~~~~----~-~~LsF~~GDIL~V-~d~~~~~d~----~wW~A~ 140 (468)
T 3shw_A 95 ---------------------VGDSFYIRTHFEY---EKES----P-YGLSFNKGEVFRV-VDTLYNGKL----GSWLAI 140 (468)
T ss_dssp ---------------------CCCCEEEEECSCB---CCSS----T-TBCCBCTTCEEEE-EESSGGGCT----TEEEEE
T ss_pred ---------------------cccccccccccCc---CCCC----C-CCceEccCCEEEE-eecccCCCC----CeEEEE
Confidence 0136899999999 4332 2 3566779999999 665 443 899999
Q ss_pred ccCCCCccceeeeccChhhHHHHHHHhhcccccccccccccccchhcccc-CccCCCCCCccCcccccccCCCCCccccc
Q psy9827 366 SLGRNNQEVQKGIIPNKARAEELATAQFNATKKELSASESRGSFFKRRRN-SHRRSKSLSKDHWDDVVFGDSISKFPAYE 444 (627)
Q Consensus 366 ~~~~~~~~~~~GlIPs~~~~e~~~~~~~~~~~~~~~~~~~~~~f~~~r~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~Ye 444 (627)
+++.++++.++|+|||+.++|+++..+.... + ...+.+++||+.+.+ +++|.++.++....+ ....+.+++||
T Consensus 141 ~~~~~~~~~~~GlIPs~~~~e~~~~~~~~~~-~--~~~~~~~~f~~~~~~r~~kk~~~~~~~~~~~---~~~~~~~~~YE 214 (468)
T 3shw_A 141 RIGKNHKEVERGIIPNKNRAEQLASVQYTLP-K--TAGGDRADFWRFRGLRSSKRNLRKSREDLSA---QPVQTKFPAYE 214 (468)
T ss_dssp EECTTSCEEEEEEEECHHHHHHHHHHHHC-------------------------------------------CCCCCSEE
T ss_pred EcCCCCcccccceecCHHHHHHHHHHhhhhh-c--cccccccchhhhccccccccccccchhhccc---ccccccCCCcc
Confidence 9988776678999999999999876554211 1 122346777654321 111111111111100 11125689999
Q ss_pred hhhccCCCCCceEEEeCccHHHHHHHHhhhCCCCcccCCCCCCCCHHHHHHHHhcccccCC-cee-----hHHhHHhCCC
Q psy9827 445 RVSLRHPGFIRPVVLFGPVADLARDKLLKDFPDKFSAPRKFNFILWATIKDTAMYQSSKEP-GMY-----QGKDSMYQGK 518 (627)
Q Consensus 445 ~V~~~~~~~~RpvVl~Gp~k~~l~~~Ll~~~p~~f~~~~~~~Fvs~e~f~~~i~~~~~~~~-~~Y-----~V~~v~~~gk 518 (627)
+|++++++++|||||+||+...|+++|++++|++|.++. |+.. .||. +| +|| +|++++++||
T Consensus 215 eV~~~~~~~~r~iVlsGPsG~Gl~~~Ll~~~p~~f~s~~-----TRpR------~gE~-dG~~Y~FTs~~~V~~vl~~Gk 282 (468)
T 3shw_A 215 RVVLREAGFLRPVTIFGPIADVAREKLAREEPDIYQIAK-----SEPR------DAGT-DQRSSGIIRLHTIKQIIDQDK 282 (468)
T ss_dssp EEEEECCSSCCCEEEESTTHHHHHHHHHHHCTTTEEECC-----CBC-----------------CBCCHHHHHHHHTTTC
T ss_pred eeEcccCCCCCEEEEECCCHHHHHHHHHHhCCCceeeec-----CCCC------Cccc-ccccCCcccHHHHHHHHHCCC
Confidence 999999999999999999966699999999999999853 3210 1222 22 233 9999999999
Q ss_pred cEEEecC-Cce-eccccCCCCceeEEEEcCCCcccCC----C---CCHHHHHHHHHHHHHHHHHhcCcccEEEECCCH-H
Q psy9827 519 DSMYQGK-ESM-YQGKDSMYQGKDSMYQGKDSMYQGK----D---IKKEVKIKLFEQSQKLEKVWSHVFTGTITLSGV-D 588 (627)
Q Consensus 519 ~ciLdi~-~~l-~~~~~~~~P~~~vIFI~ppsl~~~~----~---~~e~~~~~~~~~~~~~e~~~~~~fd~vi~n~~l-~ 588 (627)
||||||+ +++ .++...++|+ +|||+|||+++|+ | .+++.++++++++.++|++|.|+||+||+|||+ +
T Consensus 283 ~~iLdId~qg~~~l~~~~~~p~--~IFI~PPS~e~L~~~~~rl~~~see~~~r~~~~a~~~e~~~~~~fD~vIvNddl~d 360 (468)
T 3shw_A 283 HALLDVTPNAVDRLNYAQWYPI--VVFLNPDSKQGVKTMRMRLCPESRKSARKLYERSHKLRKNNHHLFTTTINLNSMND 360 (468)
T ss_dssp EEEECCCHHHHHHHHHTTCCCE--EEEEECSCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHHGGGCSEEEECBTTBC
T ss_pred eEEEEeCHHHHHHHHhcCCCCE--EEEEeCcCHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHhhhccCCEEEECCCcHH
Confidence 9999999 555 4455589999 9999999976652 1 234458999999999999999999999999999 5
Q ss_pred HHHHHHHHHHHhhCCCCeeEeCCCCccCccc
Q psy9827 589 VWYRKTRELIEKQQSSPVWISETKSNLDIRE 619 (627)
Q Consensus 589 ~~~~~l~~~i~~~~~~~~Wvp~~~~~~~~~~ 619 (627)
+||++|+++|.+++++|||||++|+.+.++|
T Consensus 361 ~a~~~L~~ii~~~~~~~~WvP~~~~~~~~~~ 391 (468)
T 3shw_A 361 GWYGALKEAIQQQQNQLVWVSEGKADGATSD 391 (468)
T ss_dssp HHHHHHHHHHHHHHTSCEEEEC---------
T ss_pred HHHHHHHHHHHHhcCCCEEeCCccccccccc
Confidence 9999999999999999999999999999775
No 3
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=100.00 E-value=2.8e-57 Score=484.76 Aligned_cols=365 Identities=34% Similarity=0.562 Sum_probs=264.5
Q ss_pred cCCCCceEEEeccCCceeEEEEccCCCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHh--cCCCee
Q psy9827 46 FVEPDPRFITFQKEGSVGIRLTGGNKVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLL--SLQDQI 123 (627)
Q Consensus 46 ~~~~~~r~v~l~k~g~lG~~i~g~~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~--~~g~~V 123 (627)
...+..+.+.+.+.++|||++.++++.|++|..|.+||||+++||++||+|++|||.++.++++.+++..++ ..|+.|
T Consensus 5 ~~~~~~~~v~~~k~~~lG~~i~gg~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~v 84 (391)
T 3tsz_A 5 ILRPSMKLVKFRKGDSVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEV 84 (391)
T ss_dssp ----CEEEEEEECCSSCCEEEEEETTTEEEEEEECTTCHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEE
T ss_pred ccCCCcEEEEeecCCceeEEEEecCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhhcCCCeE
Confidence 345678889999988999999998888999999999999999999999999999999999999999999988 488899
Q ss_pred EEEEEeCCcccceeeecCCCCccccccCCeeeccCCeecCcCChHHHHHHHhhcCCeEEEEEeecccCCCCCCCccEEEE
Q psy9827 124 HLIVQNRRDEYEHVVASQRGDSFHIKVNDRIMSANGLSLENVEYGTAVQVLRDSGSTVTLKVRRRIVLPASPEPQTLRVQ 203 (627)
Q Consensus 124 ~L~v~r~~~~~~~~v~~~~~~~~~l~~~D~i~~vng~~l~~~~~~~~~~~l~~sg~~v~l~v~r~~~~p~~~~~~~~~V~ 203 (627)
+|+|.|++..+..
T Consensus 85 ~l~v~r~~~~~~~------------------------------------------------------------------- 97 (391)
T 3tsz_A 85 TILAQKKKDVYRR------------------------------------------------------------------- 97 (391)
T ss_dssp EEEEEECHHHHGG-------------------------------------------------------------------
T ss_pred EEEEeeCCccccc-------------------------------------------------------------------
Confidence 9998864422110
Q ss_pred EeecCCCCCeeeeeCCcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEEEEEEeCCC
Q psy9827 204 LSKSRKKDDFGIILGNKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 283 (627)
Q Consensus 204 L~k~~~~~~~gi~~~~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~l~V~r~~~ 283 (627)
+ +.
T Consensus 98 -------------------------------------~-------------~~--------------------------- 100 (391)
T 3tsz_A 98 -------------------------------------I-------------VE--------------------------- 100 (391)
T ss_dssp -------------------------------------G-------------TS---------------------------
T ss_pred -------------------------------------c-------------cc---------------------------
Confidence 0 00
Q ss_pred CCCCcCCCCccccCcCCcCCCCCCCCCCCceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccC---CCCCCCCc
Q psy9827 284 RPTAYQESTTLPGKENNYMDPLSTNYSSQNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQ---LDRPVSPI 360 (627)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~---~d~~~~~~ 360 (627)
.. ..+++||||+|+| ++.+ + .++.|.+||||+| +++ +|. .
T Consensus 101 -~~-----------------------~~~~~~vral~dy---~~~~-~----~~Lsf~~Gdil~V-~~~~~~~d~----~ 143 (391)
T 3tsz_A 101 -SD-----------------------VGDSFYIRTHFEY---EKES-P----YGLSFNKGEVFRV-VDTLYNGKL----G 143 (391)
T ss_dssp -SC-----------------------CSCCEEEEECSCB---CCSS-T----TBCCBCTTCEEEE-EESSGGGSS----S
T ss_pred -cc-----------------------ccccccccccccc---CCCC-C----CcceEccCCEEEE-EeccCCCCC----C
Confidence 00 1246899999999 5432 2 2556779999999 555 343 8
Q ss_pred CccccccCCCCccceeeeccChhhHHHHHHHhhcccccccccccccccchhccccC-ccCCCCCCccCcccccccCCCCC
Q psy9827 361 NNSMDSLGRNNQEVQKGIIPNKARAEELATAQFNATKKELSASESRGSFFKRRRNS-HRRSKSLSKDHWDDVVFGDSISK 439 (627)
Q Consensus 361 wwqa~~~~~~~~~~~~GlIPs~~~~e~~~~~~~~~~~~~~~~~~~~~~f~~~r~~~-~~~~~~~~~~~~d~~~~~~~~~~ 439 (627)
||+|++++.+++..++|+|||+.++|+++..+..... .....+++||+.|+.+ +++..+.++ ++.......+.
T Consensus 144 wW~a~~~~~~~~~~~~G~IPs~~~~e~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~k~~~~k~~---~~~~~~~~~~~ 217 (391)
T 3tsz_A 144 SWLAIRIGKNHKEVERGIIPNKNRAEQLASVQYTLPK---TAGGDRADFWRFRGLRSSKRNLRKSR---EDLSAQPVQTK 217 (391)
T ss_dssp EEEEEEECGGGCEEEEEEEECHHHHHHHHSSCCC---------------------------------------------C
T ss_pred eEEEEEeCCCCCcccCCEecCHHHHHHHHHHHhhhcc---cccccccccccccccccccccccccc---ccccccccccc
Confidence 9999999876656689999999999998765442211 1223455666532111 111100011 11111111246
Q ss_pred ccccchhhccCCCCCceEEEeCccHHHHHHHHhhhCCCCcccCCCCCCCCHHHHHHHHhcccccCCc-ee-----hHHhH
Q psy9827 440 FPAYERVSLRHPGFIRPVVLFGPVADLARDKLLKDFPDKFSAPRKFNFILWATIKDTAMYQSSKEPG-MY-----QGKDS 513 (627)
Q Consensus 440 ~~~Ye~V~~~~~~~~RpvVl~Gp~k~~l~~~Ll~~~p~~f~~~~~~~Fvs~e~f~~~i~~~~~~~~~-~Y-----~V~~v 513 (627)
+++||+|++++|.++|||||+||+.+||+++|++++|++|.++.++- ..||. +|. || +|+++
T Consensus 218 ~~~YE~V~~~~~~~~r~iVlsGPsg~tl~~~L~~~~p~~~~~~tr~p-----------R~gE~-dG~~Y~Fv~~~~V~~~ 285 (391)
T 3tsz_A 218 FPAYERVVLREAGFLRPVTIFGPIADVAREKLAREEPDIYQIAKSEP-----------RDAGT-DQRSSGIIRLHTIKQI 285 (391)
T ss_dssp CCSEEEEEEEECSSCCCEEEESTTHHHHHHHHHHHCTTTEEECCCCC-----------CCSSS-CCC--CCCCHHHHHHH
T ss_pred CCCcceEECcCCCCCCEEEEECCCHHHHHHHHHhhCccccccccCCC-----------CCccc-CCccCCcCcHHHHHHH
Confidence 89999999999999999999999999999999999999999854331 01222 332 22 89999
Q ss_pred HhCCCcEEEecC-Cce-eccccCCCCceeEEEEcCCCcccCC----C---CCHHHHHHHHHHHHHHHHHhcCcccEEEEC
Q psy9827 514 MYQGKDSMYQGK-ESM-YQGKDSMYQGKDSMYQGKDSMYQGK----D---IKKEVKIKLFEQSQKLEKVWSHVFTGTITL 584 (627)
Q Consensus 514 ~~~gk~ciLdi~-~~l-~~~~~~~~P~~~vIFI~ppsl~~~~----~---~~e~~~~~~~~~~~~~e~~~~~~fd~vi~n 584 (627)
+++||||||||| +++ .++...++|+ +|||+|||+++|+ | .+++.++++++++.++|++|.|+||+||+|
T Consensus 286 ~~~Gk~~iLdId~qg~~~l~~~~~~p~--~IFI~PPS~~~L~~~~~r~~~~s~e~~~~~~~~a~~~e~~~~~~fd~vivN 363 (391)
T 3tsz_A 286 IDQDKHALLDVTPNAVDRLNYAQWYPI--VVFLNPDSKQGVKTMRMRLCPESRKSARKLYERSHKLRKNNHHLFTTTINL 363 (391)
T ss_dssp HTTTCEEEECCCHHHHHHHHHTTCCCE--EEEEECCCHHHHHHHHHHHCSSCCCCHHHHHHHHHHHHHHHGGGCSEEEEC
T ss_pred HHcCCEEEEEeCHHHHHHHHhCCCCCE--EEEEeCcCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHhccccCcEEEEC
Confidence 999999999999 554 4455589999 9999999976652 1 234458999999999999999999999999
Q ss_pred CCHH-HHHHHHHHHHHhhCCCCeeEeCC
Q psy9827 585 SGVD-VWYRKTRELIEKQQSSPVWISET 611 (627)
Q Consensus 585 ~~l~-~~~~~l~~~i~~~~~~~~Wvp~~ 611 (627)
||++ .||++|+++|.+++++|||||+.
T Consensus 364 d~l~~~a~~~l~~ii~~~~~~~~Wvp~~ 391 (391)
T 3tsz_A 364 NSMNDGWYGALKEAIQQQQNQLVWVSEG 391 (391)
T ss_dssp CTTCCHHHHHHHHHHHHHHHSEEEEEC-
T ss_pred CCcHHHHHHHHHHHHHHhcCCCeeccCC
Confidence 9998 79999999999999999999973
No 4
>3tvt_A Disks large 1 tumor suppressor protein; DLG, SRC-homology-3, guanylate kinase, phosphorylation-depen cell membrane; 1.60A {Drosophila melanogaster} PDB: 3uat_A*
Probab=100.00 E-value=2.7e-56 Score=457.40 Aligned_cols=254 Identities=20% Similarity=0.326 Sum_probs=197.2
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhhHHHHHHH
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKARAEELATA 391 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~~e~~~~~ 391 (627)
.++||||+|+| +|.+|+.+||+.+.|.+|||||| ++++|. +||||++++++++..++|+|||+.++|++..+
T Consensus 4 ~s~yvRa~fdY---~~~~D~~~P~~gL~F~~gDiL~V-~~~~d~----~wWqA~~v~~~~~~~~~GlIPS~~~~e~~~~~ 75 (292)
T 3tvt_A 4 RSLYVRALFDY---DPNRDDGLPSRGLPFKHGDILHV-TNASDD----EWWQARRVLGDNEDEQIGIVPSKRRWERKMRA 75 (292)
T ss_dssp -CCEEEECSCB---CC---------CCCBCTTCEEEE-EECCSS----SEEEECCCCC--------EEECHHHHHHHHHC
T ss_pred ceEEEEEeccC---CCCCCCCCCCCcCCcCCCCEEEE-eecCCC----CeEEEEEeCCCCCccceeEEeChHHHHHHHHH
Confidence 47999999999 88899999999666779999999 888876 99999999888777889999999999987532
Q ss_pred hhcccccccccccccccchhccccCccCCCCCCccCcccccccCCCCCccccchhhccCCCCCceEEEeCccHHHHHHHH
Q psy9827 392 QFNATKKELSASESRGSFFKRRRNSHRRSKSLSKDHWDDVVFGDSISKFPAYERVSLRHPGFIRPVVLFGPVADLARDKL 471 (627)
Q Consensus 392 ~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~~~~d~~~~~~~~~~~~~Ye~V~~~~~~~~RpvVl~Gp~k~~l~~~L 471 (627)
+.+. . +. .+.+++||+|++++++++|||||+||+|++|+++|
T Consensus 76 ~~~~------------------------~----~~----------~~~~~~YE~V~~~~~~~~RpvVl~Gp~K~tl~~~L 117 (292)
T 3tvt_A 76 RDRS------------------------V----KS----------EENVLSYEAVQRLSINYTRPVIILGPLKDRINDDL 117 (292)
T ss_dssp ------------------------------------------------CCCEEEEEEEECSSCCCEEEESTTHHHHHHHH
T ss_pred hhcc------------------------c----cc----------cccccchheEEeccCCCCCeEEEeCCCHHHHHHHH
Confidence 2100 0 00 03467999999999999999999999999999999
Q ss_pred hhhCCCCcccCCCC---------------CCC-CHHHHHHHHhccccc-----CCcee-----hHHhHHhCCCcEEEecC
Q psy9827 472 LKDFPDKFSAPRKF---------------NFI-LWATIKDTAMYQSSK-----EPGMY-----QGKDSMYQGKDSMYQGK 525 (627)
Q Consensus 472 l~~~p~~f~~~~~~---------------~Fv-s~e~f~~~i~~~~~~-----~~~~Y-----~V~~v~~~gk~ciLdi~ 525 (627)
++++|+.|..++++ ||| ++|+|+++++.|+|+ .||+| +|++++++||+||||||
T Consensus 118 l~~~p~~f~~sVs~TTR~pR~gE~dG~dY~Fv~s~e~fe~~i~~~~flE~a~~~gn~YGT~~~~V~~~~~~gk~viLdid 197 (292)
T 3tvt_A 118 ISEYPDKFGSCVPHTTRPKREYEVDGRDYHFVSSREQMERDIQNHLFIEAGQYNDNLYGTSVASVREVAEKGKHCILDVS 197 (292)
T ss_dssp HHHCTTTEECCCCEECSCCCTTCCBTTTBEECSCHHHHHHHHHTTCEEEEEEETTEEEEEEHHHHHHHHHHTCEEEECCC
T ss_pred HHhChhhccccccCCccCCcCCccCCccccccCCHHHHHHHHhcCceEEEEEEccceeEEehHHHHHHHHcCCcEEEecc
Confidence 99999999874322 798 899999999877643 59999 99999999999999999
Q ss_pred -Cce-eccccCCCCceeEEEEcCCCcccC----CCCCHHHHHHHHHHHHHHHHHhcCcccEEEECCCHHHHHHHHHHHHH
Q psy9827 526 -ESM-YQGKDSMYQGKDSMYQGKDSMYQG----KDIKKEVKIKLFEQSQKLEKVWSHVFTGTITLSGVDVWYRKTRELIE 599 (627)
Q Consensus 526 -~~l-~~~~~~~~P~~~vIFI~ppsl~~~----~~~~e~~~~~~~~~~~~~e~~~~~~fd~vi~n~~l~~~~~~l~~~i~ 599 (627)
+++ .++...++|+ +|||+|||++++ ++.++++.+++.+++.++|++|+|+||+||+|||+++||++|+++|.
T Consensus 198 ~qg~~~lk~~~~~pi--~IFI~PpS~e~L~~r~~~r~~e~~~~~~~r~~k~e~e~~~~fD~vIvNddle~a~~~l~~iI~ 275 (292)
T 3tvt_A 198 GNAIKRLQVAQLYPV--AVFIKPKSVDSVMEMNRRMTEEQAKKTYERAIKMEQEFGEYFTGVVQGDTIEEIYSKVKSMIW 275 (292)
T ss_dssp THHHHHHHHTTCCCE--EEEECCSCHHHHHHTCTTSCTTHHHHHHHHHHHHHHHHTTTCSEEECCSSHHHHHHHHHHHHH
T ss_pred chhhhhcccccccce--EEEEECCCHHHHHHHHhCCCchhHHHHHHHHHHHHHhhhhhCCEEEECcCHHHHHHHHHHHHH
Confidence 554 4455688999 999999996644 33344448999999999999999999999999999999999999999
Q ss_pred hhCCCCeeEeCCCC
Q psy9827 600 KQQSSPVWISETKS 613 (627)
Q Consensus 600 ~~~~~~~Wvp~~~~ 613 (627)
+++.+++|||+...
T Consensus 276 ~e~~~~~WVP~~~~ 289 (292)
T 3tvt_A 276 SQSGPTIWVPSKES 289 (292)
T ss_dssp HHTCSEEEEEC---
T ss_pred HhhCCCeEecCccc
Confidence 99999999998754
No 5
>3kfv_A Tight junction protein ZO-3; structural genomics consortium, SGC, cell junction, cell membrane, membrane, SH3 domain; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.5e-52 Score=423.77 Aligned_cols=279 Identities=26% Similarity=0.401 Sum_probs=191.9
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCC-----CCCcCccccccCCCCccceeeeccChhhHH
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRP-----VSPINNSMDSLGRNNQEVQKGIIPNKARAE 386 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~-----~~~~wwqa~~~~~~~~~~~~GlIPs~~~~e 386 (627)
+++||||+|+|.| . +..+++|++|||||| +++.|.. ...-||+|++++.++.+.++|+|||+.++|
T Consensus 3 dsfyVRalfdy~~---~-----~~~eL~F~kGDil~V-~dt~~~~~~~~~~~~gwW~A~~~~~~~~~~~~G~IPs~~~ae 73 (308)
T 3kfv_A 3 DSFYIRTHFELEP---S-----PPSGLGFTRGDVFHV-LDTLHPGPGQSHARGGHWLAVRMGRDLREQERGIIPNQSRAE 73 (308)
T ss_dssp CCEEEEECSCBCC---C-----SSSBCCBCTTCEEEE-EEC-------------CEEEEEECTTSCEEEEEEECCHHHHH
T ss_pred ccEEEEEecCcCC---C-----CcccCCCccCCEEEE-ccccCCCcccccccCceEEEEecCCCCCcCCCCeeechHHHH
Confidence 6899999999933 2 234677889999999 5555431 012399999998888778999999999999
Q ss_pred HHHHHhhcccc-----cccccccccccchhccccCccCCCCCCccCcccccccCCCCCccccchhhccCCCCCceEEEeC
Q psy9827 387 ELATAQFNATK-----KELSASESRGSFFKRRRNSHRRSKSLSKDHWDDVVFGDSISKFPAYERVSLRHPGFIRPVVLFG 461 (627)
Q Consensus 387 ~~~~~~~~~~~-----~~~~~~~~~~~f~~~r~~~~~~~~~~~~~~~d~~~~~~~~~~~~~Ye~V~~~~~~~~RpvVl~G 461 (627)
+++..+..... .+..+++.|++||++|++++ +.|...+...+++++......+++||+|++++++++|||||+|
T Consensus 74 q~~~~~~~~~~~~~~~~~~~~~~~r~~f~~~~~~r~-~~k~~~~~~~~d~~~~~~~~~~~~YE~V~~~~~~~~RPvVl~G 152 (308)
T 3kfv_A 74 QLASLEAAQRAVGVGPGSSAGSNARAEFWRLRGLRR-GAKKTTQRSREDLSALTRQGRYPPYERVVLREASFKRPVVILG 152 (308)
T ss_dssp HHHHHHHHHCC------------------------------------CCCHHHHHHHTCCSEEEEEEEECSSCCCEEEES
T ss_pred HHHHHHHhhhhcccccccccccccccchhhhccccc-cccccccccccccccccccCCCcCchheeccccCCCCeEEEeC
Confidence 98765542111 12234557889998764321 1121222233443321112467999999999999999999999
Q ss_pred ccHHHHHHHHhhhCCCCcccCCCCCCCCHHHHHHHHhcccccCCcee-hHHhHHhCCCcEEEecC-Cce-eccccCCCCc
Q psy9827 462 PVADLARDKLLKDFPDKFSAPRKFNFILWATIKDTAMYQSSKEPGMY-QGKDSMYQGKDSMYQGK-ESM-YQGKDSMYQG 538 (627)
Q Consensus 462 p~k~~l~~~Ll~~~p~~f~~~~~~~Fvs~e~f~~~i~~~~~~~~~~Y-~V~~v~~~gk~ciLdi~-~~l-~~~~~~~~P~ 538 (627)
|.|++|+++|++++|++|++|++ ++++ +..++|+ -. +|++++++||+|||||| +++ .++...++|+
T Consensus 153 P~k~~l~~~L~~~~P~~F~~~v~---~~r~-----i~~~~fi---s~~~V~~vl~~Gk~~ILDId~QGa~~lk~~~~~pi 221 (308)
T 3kfv_A 153 PVADIAMQKLTAEMPDQFEIAET---VSRT-----DSPSKII---KLDTVRVIAEKDKHALLDVTPSAIERLNYVQYYPI 221 (308)
T ss_dssp TTHHHHHHHHHHHCTTTEEECCC---C-------------CC---CHHHHHHHHHTTCEEEECCCHHHHHHHHHTTCCCE
T ss_pred ccHHHHHHHHHHhCccccccccc---cccc-----ccCCCee---cHHHHHHHHHCCCcEEEEECHHHHHHHHhcCCCCE
Confidence 99999999999999999999987 2332 4444443 12 99999999999999999 554 4445589999
Q ss_pred eeEEEEcCCCcccC----CC---CCHHHHHHHHHHHHHHHHHhcCcccEEE-ECCCHHHHHHHHHHHHHhhCCCCeeEeC
Q psy9827 539 KDSMYQGKDSMYQG----KD---IKKEVKIKLFEQSQKLEKVWSHVFTGTI-TLSGVDVWYRKTRELIEKQQSSPVWISE 610 (627)
Q Consensus 539 ~~vIFI~ppsl~~~----~~---~~e~~~~~~~~~~~~~e~~~~~~fd~vi-~n~~l~~~~~~l~~~i~~~~~~~~Wvp~ 610 (627)
+|||+|||+++| +| .+++.++++++++.++|++|+++||+|| +|||+++||++|+++|.+++++|||||+
T Consensus 222 --~IFI~PPS~eeL~~rr~R~~~esee~~~r~~~aa~eiE~~~~~~FD~vI~VNDdle~A~~~L~~iI~~~~~epqWvp~ 299 (308)
T 3kfv_A 222 --VVFFIPESRPALKALRQWLAPASRRSTRRLYAQAQKLRKHSSHLFTATIPLNGTSDTWYQELKAIIREQQTRPIWTAE 299 (308)
T ss_dssp --EEEEEESCHHHHHHHHHHHSTTCCCCHHHHHHHHHHHHHHHGGGCSEEEEECSSSTHHHHHHHHHHHHHTTSEEEEEC
T ss_pred --EEEEeCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHhhhccCcEEEEcCCCHHHHHHHHHHHHHHhcCCCeEeeh
Confidence 999999997665 22 2344588899998899999999999999 9999999999999999999999999999
Q ss_pred CCC
Q psy9827 611 TKS 613 (627)
Q Consensus 611 ~~~ 613 (627)
++.
T Consensus 300 ~~~ 302 (308)
T 3kfv_A 300 DQL 302 (308)
T ss_dssp ---
T ss_pred hhh
Confidence 874
No 6
>1kjw_A Postsynaptic density protein 95; protein-protein interaction, scaffold, neuropeptide; 1.80A {Rattus norvegicus} SCOP: b.34.2.1 c.37.1.1 PDB: 1jxm_A* 1jxo_A
Probab=100.00 E-value=1.3e-45 Score=380.29 Aligned_cols=261 Identities=20% Similarity=0.313 Sum_probs=214.1
Q ss_pred ceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhhHHHHHHHh
Q psy9827 313 NLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKARAEELATAQ 392 (627)
Q Consensus 313 ~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~~e~~~~~~ 392 (627)
++||||+|+| ++.+|+.+|+.++.|.+||||+| +++.|. .||+|+..+.+++..+.|+|||+.++|++...+
T Consensus 1 s~~vrAlydy---~~~~~~~~p~~eLsf~~GDil~V-~~~~d~----~WW~a~~~~~~~~~~~~G~iPsny~~e~~~~~~ 72 (295)
T 1kjw_A 1 GFYIRALFDY---DKTKDCGFLSQALSFRFGDVLHV-IDAGDE----EWWQARRVHSDSETDDIGFIPSKRRVERREWSR 72 (295)
T ss_dssp CEEEEESSCB---CHHHHHCCCSSBCCBCTTCEEEE-EECCSS----SEEEEEECCSSCCCSCCEEEECHHHHHHHHHTS
T ss_pred CEEEEEeecc---CCCCCCCCCCcCCcCCCCCEEEE-EEeCCC----CeEEEEECCCCCccCceeEeecHHHHHHHHHhh
Confidence 4799999999 77777778888888889999999 666654 899999887655446899999999999875432
Q ss_pred hcccccccccccccccchhccccCccCCCCCCccCcccccccCCCCCccccchhhccCCCCCceEEEeCccHHHHHHHHh
Q psy9827 393 FNATKKELSASESRGSFFKRRRNSHRRSKSLSKDHWDDVVFGDSISKFPAYERVSLRHPGFIRPVVLFGPVADLARDKLL 472 (627)
Q Consensus 393 ~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~~~~d~~~~~~~~~~~~~Ye~V~~~~~~~~RpvVl~Gp~k~~l~~~Ll 472 (627)
.+ +..|. + +++ ... ....+++||+|.++++.+.|||||+||+|++|+++|+
T Consensus 73 ~~-----------~~~~~-----~--~~~----~~~-------~~~~~~~Ye~V~~~~~~~~r~ivl~GPgK~tl~~~L~ 123 (295)
T 1kjw_A 73 LK-----------AKDWG-----S--SSG----SQG-------REDSVLSYETVTQMEVHYARPIIILGPTKDRANDDLL 123 (295)
T ss_dssp CC--------------CC-----S--CCS----SCC-------CCCCCCCEEEEEEEECCSCCCEEEESTTHHHHHHHHH
T ss_pred hc-----------ccccC-----c--ccc----ccc-------ccCCCCCcceeeeecCCCCCEEEEECCCHHHHHHHHH
Confidence 10 11111 0 000 001 1145789999999999999999999999999999999
Q ss_pred hhCCCCcccCCC--------C-------CCC-CHHHHHHHHhccccc-----CCcee-----hHHhHHhCCCcEEEecC-
Q psy9827 473 KDFPDKFSAPRK--------F-------NFI-LWATIKDTAMYQSSK-----EPGMY-----QGKDSMYQGKDSMYQGK- 525 (627)
Q Consensus 473 ~~~p~~f~~~~~--------~-------~Fv-s~e~f~~~i~~~~~~-----~~~~Y-----~V~~v~~~gk~ciLdi~- 525 (627)
+.+|+.|..+++ + ||| |+++|+++++.|+|+ .||+| +|++++++|++|||||+
T Consensus 124 ~~~~~~~~~~vs~TTR~~R~gE~~G~dY~Fv~s~eef~~~i~~g~flE~~~~~g~~YGt~~~~V~~~~~~G~~vildid~ 203 (295)
T 1kjw_A 124 SEFPDKFGSCVPHTTRPKREYEIDGRDYHFVSSREKMEKDIQAHKFIEAGQYNSHLYGTSVQSVREVAEQGKHCILDVSA 203 (295)
T ss_dssp HHCTTTEECCCCEECSCCCTTCCBTTTBEECSCHHHHHHHHHTTCEEEEEEETTEEEEEEHHHHHHHHHTTCEEEECCCT
T ss_pred hhCccceeeeeeecccCCCCccccCceeEecCCHHHHHHHHHCCCcEEEEEEcCcEeeeeHHHHHHHHhcCCeEEEEeCH
Confidence 999988876332 1 799 999999999877654 59999 79999999999999999
Q ss_pred Cce-eccccCCCCceeEEEEcCCCcccC----CCCCHHHHHHHHHHHHHHHHHhcCcccEEEECCCHHHHHHHHHHHHHh
Q psy9827 526 ESM-YQGKDSMYQGKDSMYQGKDSMYQG----KDIKKEVKIKLFEQSQKLEKVWSHVFTGTITLSGVDVWYRKTRELIEK 600 (627)
Q Consensus 526 ~~l-~~~~~~~~P~~~vIFI~ppsl~~~----~~~~e~~~~~~~~~~~~~e~~~~~~fd~vi~n~~l~~~~~~l~~~i~~ 600 (627)
+.+ .++..+++|+ +|||+|||++++ +|.++++++++++++.++|+++.++||++|+|||+++|+++|+++|..
T Consensus 204 ~g~~~l~~~~~~pi--~IfI~pps~~~L~~L~~R~t~~~i~~rl~~a~~~e~~~~~~fd~vivNd~le~a~~~l~~ii~~ 281 (295)
T 1kjw_A 204 NAVRRLQAAHLHPI--AIFIRPRSLENVLEINKRITEEQARKAFDRATKLEQEFTECFSAIVEGDSFEEIYHKVKRVIED 281 (295)
T ss_dssp THHHHHHHTTCCCE--EEEECCSSHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHGGGCSEEECCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccCCe--EEEEECCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHhccccCeEEEECcCHHHHHHHHHHHHHh
Confidence 665 4444578999 999999996554 678888899999999889999999999999999999999999999999
Q ss_pred hCCCCeeEeCCC
Q psy9827 601 QQSSPVWISETK 612 (627)
Q Consensus 601 ~~~~~~Wvp~~~ 612 (627)
++.+|||||++.
T Consensus 282 ~~~~~~Wvp~~~ 293 (295)
T 1kjw_A 282 LSGPYIWVPARE 293 (295)
T ss_dssp HSCSEEEEECSC
T ss_pred ccCCCEEeeCCC
Confidence 999999999874
No 7
>4dey_A Voltage-dependent L-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 1.95A {Oryctolagus cuniculus} PDB: 4dex_A 1t3l_A 1t3s_A 1vyv_A 1vyu_A 1vyt_A 1t0h_B 1t0j_B 1t0h_A 1t0j_A
Probab=100.00 E-value=1.6e-36 Score=311.05 Aligned_cols=245 Identities=16% Similarity=0.115 Sum_probs=159.7
Q ss_pred CCceeeCCCCCCCCCCCccCcCCCCCCCCCC--CCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhhHHHH
Q psy9827 311 SQNLYVQPPTRGGPNNLLEDKSNLVPRAGRS--RNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKARAEEL 388 (627)
Q Consensus 311 ~~~~yvra~~~y~~~~~~~d~~~~~~~~gl~--~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~~e~~ 388 (627)
...+||||+|+| ++..|+.+||+++||+ +||||+| ++++|. +||||++++..| .+|+|||+.++|++
T Consensus 36 ~~~~~vrAlfdY---~~~~d~d~P~~e~~LsF~~GDiL~V-~~~~d~----~WWqar~~~~~g---~~GlIPS~~~~E~~ 104 (337)
T 4dey_A 36 PVAFAVRTNVSY---SAAHEDDVPVPGMAISFEAKDFLHV-KEKFNN----DWWIGRLVKEGC---EIGFIPSPVKLENM 104 (337)
T ss_dssp CCCEEEEESSCB---CCCGGGCCSSTTCBCCBCTTCEEEE-EEECSS----SEEEEEESSTTC---CCEEEECHHHHHHH
T ss_pred CccEEEEEcccc---CCCCCCCCCcccccccccCCCEEEE-EecCCC----CeEEEEECCCCC---CccEecCHHHHHHH
Confidence 357899999999 7888999999998877 9999999 777775 999999987554 58999999999998
Q ss_pred HHHhhcccccccccccccccchhccccCccCCCCCCccCcccccccCCCCCccccchhhccCCCCCceEEEeCccH----
Q psy9827 389 ATAQFNATKKELSASESRGSFFKRRRNSHRRSKSLSKDHWDDVVFGDSISKFPAYERVSLRHPGFIRPVVLFGPVA---- 464 (627)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~~~~d~~~~~~~~~~~~~Ye~V~~~~~~~~RpvVl~Gp~k---- 464 (627)
+..+.+..+ .+.|-. +++++..+ .+. +.+++||.|- ..|||||+||+.
T Consensus 105 ~~~~~~~~~--------~~~~~~---~~~~~~~~-~k~-----------~~~~~Ye~vp-----~~RPvvlvGP~~~g~~ 156 (337)
T 4dey_A 105 RLQHEQRAK--------EFKLHS---KEKRMPFF-KKT-----------EHTPPYDVVP-----SMRPVVLVGPSLKGYE 156 (337)
T ss_dssp HHHHHHHCC------------------------------------------CCSEEEEC-----SSCCEEEECSSCTTSH
T ss_pred HHhhhhccc--------cCCCCc---cccccccc-ccC-----------CCCCCccccC-----CCCceEEECCccccch
Confidence 765432110 111211 11111111 111 3568999993 569999999992
Q ss_pred --HHHHHHHhhhCCCCcccC------CCC----------CCCCHHHHHHHHhcccccCCcee-------hHHhHHhCCCc
Q psy9827 465 --DLARDKLLKDFPDKFSAP------RKF----------NFILWATIKDTAMYQSSKEPGMY-------QGKDSMYQGKD 519 (627)
Q Consensus 465 --~~l~~~Ll~~~p~~f~~~------~~~----------~Fvs~e~f~~~i~~~~~~~~~~Y-------~V~~v~~~gk~ 519 (627)
+.+.++|+...|++|..+ .++ +|++++.|+..+.. +.++ .|.+++++||+
T Consensus 157 ~td~m~~~l~d~l~~~F~~~i~~tR~~~d~~~~~r~~~~~~~~~~~~e~~~~~-----~~~~ev~seVe~i~~v~~~Gk~ 231 (337)
T 4dey_A 157 VTDMMQKALFDFLKHRFEGRISITRVTADISLAKRSVLNNPSKHAIIERSNTR-----SSLAEVQSEIERIFELARTLQL 231 (337)
T ss_dssp HHHHHHHHHHHHHHHHTTTSEEEEEECSCGGGC-------------------C-----CCHHHHHHHHHHHHHHTTTCCE
T ss_pred hHHHHHHHHHHhhHHhcCCccceEeecchhhhcchhhhhcccchhhhcccccc-----cchHHHHhHHHHHHHHHhCCCE
Confidence 456666665555555543 322 46667777765432 2333 44456668999
Q ss_pred EEEecC-C-ce-eccccCCCCceeEEEEcCCCcccC-----CCCCHHH--HHHHHHHHHHHHHHhcCcccEEEECCCHHH
Q psy9827 520 SMYQGK-E-SM-YQGKDSMYQGKDSMYQGKDSMYQG-----KDIKKEV--KIKLFEQSQKLEKVWSHVFTGTITLSGVDV 589 (627)
Q Consensus 520 ciLdi~-~-~l-~~~~~~~~P~~~vIFI~ppsl~~~-----~~~~e~~--~~~~~~~~~~~e~~~~~~fd~vi~n~~l~~ 589 (627)
|||||| + .. ..+...++|+ +|||+|||+++| .|+++.+ +++.+++++++.+.|.++||+||+|||+++
T Consensus 232 vILDIDvQnGa~qlk~~~~~~i--~IFI~PPS~eeLe~RL~~RGt~~~~rl~~al~~ae~E~~~~~~~FDyvIVNDdLe~ 309 (337)
T 4dey_A 232 VVLDADTINHPAQLSKTSLAPI--VVYVKISSPKVLQRLIKSRGKSQAKHLNVQMVAADKLAQCPPELFDVILDENQLED 309 (337)
T ss_dssp EEEEETTCCSGGGTTTSSCCCE--EEEECCSCHHHHHHHHHTTCHHHHTTHHHHHHHHHHHHHSCGGGCSEEECCSSHHH
T ss_pred EEEEeCcHHHHHHHHhcCCCCE--EEEEECcCHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhCcccCCEEEECCCHHH
Confidence 999999 6 66 5554556677 999999997766 5665431 344444444434456899999999999999
Q ss_pred HHHHHHHHHHhh
Q psy9827 590 WYRKTRELIEKQ 601 (627)
Q Consensus 590 ~~~~l~~~i~~~ 601 (627)
||.+|+++|...
T Consensus 310 A~~~L~~iI~~~ 321 (337)
T 4dey_A 310 ACEHLADYLEAY 321 (337)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999874
No 8
>3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0
Probab=99.94 E-value=3.2e-26 Score=221.20 Aligned_cols=152 Identities=19% Similarity=0.276 Sum_probs=126.4
Q ss_pred CCCCceEEEeCcc---HHHHHHHHhhhCCCCcccC--------CC-------CCCCCHHHHHHHHhccccc-----CCce
Q psy9827 451 PGFIRPVVLFGPV---ADLARDKLLKDFPDKFSAP--------RK-------FNFILWATIKDTAMYQSSK-----EPGM 507 (627)
Q Consensus 451 ~~~~RpvVl~Gp~---k~~l~~~Ll~~~p~~f~~~--------~~-------~~Fvs~e~f~~~i~~~~~~-----~~~~ 507 (627)
+...++|||+||+ |+||.++|+..+|+.|..+ ++ .+|++.++|++++..++|+ .||+
T Consensus 16 ~~~g~~ivl~GPSGaGKsTL~~~L~~~~~~~~~~~vs~TTR~p~~gE~~G~~y~fvs~~~f~~~i~~~~fle~~~~~~n~ 95 (197)
T 3ney_A 16 FQGRKTLVLIGASGVGRSHIKNALLSQNPEKFVYPVPYTTRPPRKSEEDGKEYHFISTEEMTRNISANEFLEFGSYQGNM 95 (197)
T ss_dssp CCSCCEEEEECCTTSSHHHHHHHHHHHCTTTEECCCCEECSCCCTTCCTTSSCEECCHHHHHHHHHTTCEEEEEEETTEE
T ss_pred CCCCCEEEEECcCCCCHHHHHHHHHhhCCccEEeeecccccCCcCCeeccccceeccHHHhhhhhhhhhhhhhhhhhcee
Confidence 4467999999999 9999999999999766542 21 2699999999998766543 4899
Q ss_pred e-----hHHhHHhCCCcEEEecC-Cce-eccccCCCCceeEEEEcCCCcccCCCCCHHHHHHHHHHHHHHHHHhcCcccE
Q psy9827 508 Y-----QGKDSMYQGKDSMYQGK-ESM-YQGKDSMYQGKDSMYQGKDSMYQGKDIKKEVKIKLFEQSQKLEKVWSHVFTG 580 (627)
Q Consensus 508 Y-----~V~~v~~~gk~ciLdi~-~~l-~~~~~~~~P~~~vIFI~ppsl~~~~~~~e~~~~~~~~~~~~~e~~~~~~fd~ 580 (627)
| +|++++++|++|||||| +.+ .+|.....|+ +|||+|||++ +.+|+ .+++.+++++++.+|.++||+
T Consensus 96 YGt~~~~v~~~l~~G~~vildid~qg~~~~~~~~~~~~--~Ifi~Pps~~---~~~e~-~~~i~~r~~~~~~~~~~~fd~ 169 (197)
T 3ney_A 96 FGTKFETVHQIHKQNKIAILDIEPQTLKIVRTAELSPF--IVFIAPTDQG---TQTEA-LQQLQKDSEAIRSQYAHYFDL 169 (197)
T ss_dssp EEEEHHHHHHHHHTTCEEEEECCGGGHHHHCSTTTCEE--EEEEEECCBS---SCCHH-HHHHHHHHHHHHHHHGGGCSE
T ss_pred cccchhhHHHHHhcCCeEEEEECHHHHHHHHhcCCCce--EEEEeCCCcc---ccchH-HHHHHHHHHHHHHhhccCCCE
Confidence 9 79999999999999999 666 5554456677 9999999985 44555 666777888888889999999
Q ss_pred EEECCCHHHHHHHHHHHHHhhCCCCeeE
Q psy9827 581 TITLSGVDVWYRKTRELIEKQQSSPVWI 608 (627)
Q Consensus 581 vi~n~~l~~~~~~l~~~i~~~~~~~~Wv 608 (627)
||+|||+++|+++|+++|.+++++||||
T Consensus 170 vivNd~l~~a~~~l~~ii~~~~~~pqWv 197 (197)
T 3ney_A 170 SLVNNGVDETLKKLQEAFDQACSSPQWV 197 (197)
T ss_dssp EEEESCHHHHHHHHHHHHHHCCCCCC--
T ss_pred EEECCCHHHHHHHHHHHHHHccCCCCCC
Confidence 9999999999999999999999999998
No 9
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A
Probab=99.92 E-value=2.1e-25 Score=213.89 Aligned_cols=146 Identities=18% Similarity=0.230 Sum_probs=116.6
Q ss_pred CceEEEeCcc---HHHHHHHHhhhCCCCcccC--------CCC-------CCCCHHHHHHHHhccccc-----CCcee--
Q psy9827 454 IRPVVLFGPV---ADLARDKLLKDFPDKFSAP--------RKF-------NFILWATIKDTAMYQSSK-----EPGMY-- 508 (627)
Q Consensus 454 ~RpvVl~Gp~---k~~l~~~Ll~~~p~~f~~~--------~~~-------~Fvs~e~f~~~i~~~~~~-----~~~~Y-- 508 (627)
.|||||+||| |+||+++|++++|+.|..+ +++ ||||+++|+++++.|+|+ .||+|
T Consensus 1 ~RpIVi~GPSG~GK~Tl~~~L~~~~~~~~~~svs~TTR~pR~gE~~G~dY~Fvs~~eF~~~i~~g~flE~~~~~g~~YGt 80 (186)
T 1ex7_A 1 SRPIVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGS 80 (186)
T ss_dssp CCCEEEECCTTSSHHHHHHHHHHHCTTTEEECCCEECSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEETTEEEEE
T ss_pred CCEEEEECCCCCCHHHHHHHHHHhCCCCeEEEEEEeccCCCCCCcCCceeEeecHHHHHHHHHcCCEEEEEEEcCceeee
Confidence 3999999999 9999999999999987652 221 799999999999877654 59999
Q ss_pred ---hHHhHHhCCCcEEEecC-Cce--eccccCCCCceeEEEEcCCCcccC-------CCCCHHHHHHHHHHHHH-HHHHh
Q psy9827 509 ---QGKDSMYQGKDSMYQGK-ESM--YQGKDSMYQGKDSMYQGKDSMYQG-------KDIKKEVKIKLFEQSQK-LEKVW 574 (627)
Q Consensus 509 ---~V~~v~~~gk~ciLdi~-~~l--~~~~~~~~P~~~vIFI~ppsl~~~-------~~~~e~~~~~~~~~~~~-~e~~~ 574 (627)
+|++++++|++||||++ +.+ .++...+.|+ +|||.|||++.| .+.+++++++++.++.. ++..+
T Consensus 81 ~~~~v~~~l~~g~~vil~id~~g~~~~k~~~~~~~~--~Ifi~pps~e~L~~RL~~Rg~e~~e~i~~Rl~~a~~e~~~~~ 158 (186)
T 1ex7_A 81 TVASVKQVSKSGKTCILDIDMQGVKSVKAIPELNAR--FLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQAELAYAE 158 (186)
T ss_dssp EHHHHHHHHHHTSEEEEECCHHHHHHHHTCGGGCCE--EEEEECSCHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHT
T ss_pred ecceeeehhhCCCEEEecCCHHHHHHHHHhcccCce--EEEEeCCCHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhhcc
Confidence 79999999999999999 444 3312244567 999999996554 33456667777776644 44445
Q ss_pred cCcccEEEECCCHHHHHHHHHHHHHhh
Q psy9827 575 SHVFTGTITLSGVDVWYRKTRELIEKQ 601 (627)
Q Consensus 575 ~~~fd~vi~n~~l~~~~~~l~~~i~~~ 601 (627)
.+.||+||+|||+++|+++|+++|..+
T Consensus 159 ~~~fD~vIvNddle~a~~~l~~iI~ae 185 (186)
T 1ex7_A 159 TGAHDKVIVNDDLDKAYKELKDFIFAE 185 (186)
T ss_dssp TTCSSEEEECSSHHHHHHHHHHHHTTC
T ss_pred ccCCcEEEECcCHHHHHHHHHHHHHhc
Confidence 578999999999999999999999765
No 10
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.87 E-value=5e-21 Score=187.14 Aligned_cols=181 Identities=18% Similarity=0.274 Sum_probs=143.0
Q ss_pred CCCCccccccCCCCceEEEeccC-CceeEEEEccCC----CCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCC--CC
Q psy9827 37 GSPDLFSIFFVEPDPRFITFQKE-GSVGIRLTGGNK----VGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKG--IT 108 (627)
Q Consensus 37 ~~~d~~~~~~~~~~~r~v~l~k~-g~lG~~i~g~~~----~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~--~~ 108 (627)
...|||+.++...+...+.+.+. ++|||++.++.+ .|++|..|.++|||+++| |++||+|++|||.++.+ ++
T Consensus 5 ~~~dp~~~~~~~~~~~~v~~~~~~~~lG~~i~~g~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~ 84 (206)
T 3r0h_A 5 KPQEPATAEIKPNKKILIELKVEKKPMGVIVCGGKNNHVTTGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMT 84 (206)
T ss_dssp ---CTTTCCCCTTSCEEEEEECTTSCCCEEEECCSSSSCCSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSC
T ss_pred CCCCCCcCCCCCCCEEEEEEEeCCCCcCEEEecccCCCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccC
Confidence 34688998888888888888886 489999998743 489999999999999999 99999999999999999 99
Q ss_pred HHHHHHHHhcCCCe-eEEEEEeCCcccceeeecCCCCccccccCCeeeccCCeecCcCChHHHHHHHhhcCCeEEEEEee
Q psy9827 109 REEAVLFLLSLQDQ-IHLIVQNRRDEYEHVVASQRGDSFHIKVNDRIMSANGLSLENVEYGTAVQVLRDSGSTVTLKVRR 187 (627)
Q Consensus 109 ~~~~~~~l~~~g~~-V~L~v~r~~~~~~~~v~~~~~~~~~l~~~D~i~~vng~~l~~~~~~~~~~~l~~sg~~v~l~v~r 187 (627)
+.++...++..+.. +.|+|.|......
T Consensus 85 ~~~~~~~~~~~~~~~v~l~v~R~~~~~~---------------------------------------------------- 112 (206)
T 3r0h_A 85 TLKVHQLFHTTYEKAVTLTVFRADPPEL---------------------------------------------------- 112 (206)
T ss_dssp HHHHHHHHHSCCSSEEEEEEECCSSCCE----------------------------------------------------
T ss_pred HHHHHHHHHhcCCCceEEEEEecccCCC----------------------------------------------------
Confidence 99999999888777 9999997543211
Q ss_pred cccCCCCCCCccEEEEEeecC-CCCCeeeeeC-CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHH
Q psy9827 188 RIVLPASPEPQTLRVQLSKSR-KKDDFGIILG-NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEAR 264 (627)
Q Consensus 188 ~~~~p~~~~~~~~~V~L~k~~-~~~~~gi~~~-~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~ 264 (627)
..+.+.+.+.. .+.+|.+... .|++|..|.+| ++|..+| |++||+|++|||+++.+++++++.
T Consensus 113 ----------~~~~v~l~~~~~~~lG~~~~~~~~gv~V~~V~~g----s~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~ 178 (206)
T 3r0h_A 113 ----------EKFNVDLMKKAGKELGLSLSPNEIGCTIADLIQG----QYPEIDSKLQRGDIITKFNGDALEGLPFQVCY 178 (206)
T ss_dssp ----------EEEEEEEECCTTCCCCEEEEECSSCEEEEEECTT----SCHHHHHHCCTTCEEEEETTEECTTCCHHHHH
T ss_pred ----------cEEEEEEecCCCCccCeEEEcCCceEEEEEECCC----ChHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 11223333321 2233433332 58999999887 3444555 999999999999999999999999
Q ss_pred HHHHcCCCeEEEEEEeCCC
Q psy9827 265 KLIDSSKEKLSLTIRREVP 283 (627)
Q Consensus 265 ~~l~~~~~~v~l~V~r~~~ 283 (627)
.+++..++.+.|.|.|...
T Consensus 179 ~~l~~~~~~v~L~V~R~~~ 197 (206)
T 3r0h_A 179 ALFKGANGKVSMEVTRPKP 197 (206)
T ss_dssp HHHHTCCSEEEEEEEEECC
T ss_pred HHHHcCCCeEEEEEEeCCC
Confidence 9999998999999999644
No 11
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.87 E-value=4.9e-21 Score=185.30 Aligned_cols=168 Identities=25% Similarity=0.409 Sum_probs=133.4
Q ss_pred CceEEEeccC-CceeEEEEccC-------CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCC
Q psy9827 50 DPRFITFQKE-GSVGIRLTGGN-------KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQ 120 (627)
Q Consensus 50 ~~r~v~l~k~-g~lG~~i~g~~-------~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g 120 (627)
+.+.+.+.+. ++|||++.++. ..|++|..|.|+|||+++| |++||+|++|||.++.++++.++...++..+
T Consensus 5 ~~~~v~l~~~~~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 84 (196)
T 3gsl_A 5 EYEEITLERGNSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAG 84 (196)
T ss_dssp EEEEEEEECBTTBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSC
T ss_pred EEEEEEEEECCCCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 4567788776 48999999974 3589999999999999999 9999999999999999999999999999999
Q ss_pred CeeEEEEEeCCcccceeeecCCCCccccccCCeeeccCCeecCcCChHHHHHHHhhcCCeEEEEEeecccCCCCCCCccE
Q psy9827 121 DQIHLIVQNRRDEYEHVVASQRGDSFHIKVNDRIMSANGLSLENVEYGTAVQVLRDSGSTVTLKVRRRIVLPASPEPQTL 200 (627)
Q Consensus 121 ~~V~L~v~r~~~~~~~~v~~~~~~~~~l~~~D~i~~vng~~l~~~~~~~~~~~l~~sg~~v~l~v~r~~~~p~~~~~~~~ 200 (627)
..+.|++.|..+... ..+
T Consensus 85 ~~v~l~v~r~~~~~~--------------------------------------------------------------~~~ 102 (196)
T 3gsl_A 85 SIVRLYVMRRKPPAE--------------------------------------------------------------KVM 102 (196)
T ss_dssp SEEEEEEEEECCCCE--------------------------------------------------------------EEE
T ss_pred CcEEEEEEecCCCcc--------------------------------------------------------------ccE
Confidence 999999987542211 112
Q ss_pred EEEEeecCCCCCeeeee---------CCcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHcC
Q psy9827 201 RVQLSKSRKKDDFGIIL---------GNKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDSS 270 (627)
Q Consensus 201 ~V~L~k~~~~~~~gi~~---------~~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~ 270 (627)
.+.+.+...+.+|.+.. ..|++|..|.++ ++|..+| |++||+|++|||+++.++++++++.+|+++
T Consensus 103 ~v~l~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~g----s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 178 (196)
T 3gsl_A 103 EIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEG----GAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNT 178 (196)
T ss_dssp EEEEEEBTTBSCEEEEESBTSCSBTTBCCEEEEEECTT----SHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHSC
T ss_pred EEEEecCCCCceEEEEccCCCcCCCCCCCEEEEEECCC----ChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHcC
Confidence 23333332222333322 147999999887 3444555 999999999999999988899999999998
Q ss_pred CCeEEEEEEeCCC
Q psy9827 271 KEKLSLTIRREVP 283 (627)
Q Consensus 271 ~~~v~l~V~r~~~ 283 (627)
++.+.|+|.|+..
T Consensus 179 ~~~v~l~v~R~~~ 191 (196)
T 3gsl_A 179 YDVVYLKVAKPSN 191 (196)
T ss_dssp CEEEEEEEEEESC
T ss_pred CCeEEEEEeCCCC
Confidence 8899999999764
No 12
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=99.82 E-value=2e-19 Score=195.50 Aligned_cols=222 Identities=23% Similarity=0.271 Sum_probs=159.3
Q ss_pred cccccccCC-CCCCCCC-------CCceeeeecccccCCCCCccccccCCCCceEEE----e-----ccCCceeEEEEcc
Q psy9827 7 RFITFQKEG-SVGIRLT-------GGNKVGIFVTAVQPGSPDLFSIFFVEPDPRFIT----F-----QKEGSVGIRLTGG 69 (627)
Q Consensus 7 ~~~~~~~~~-~~~~~~~-------~g~~iGin~~ai~~~~~d~~~~~~~~~~~r~v~----l-----~k~g~lG~~i~g~ 69 (627)
.|..+.+++ +++++++ .|++|||| +++....++..+++|++|...... + ...+.||+++...
T Consensus 171 ~~~~~iq~da~i~~GnSGGPl~n~~G~vvGI~-~~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~r~~lGv~~~~~ 249 (436)
T 4a8c_A 171 GLENFIQTDASINRGNAGGALLNLNGELIGIN-TAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTEM 249 (436)
T ss_pred CccCEEEEcCccCCCCCcCcccCCCCEEEEEE-eeeccCCCCceeEEEEEehHHHHHHHHHHHhccccccccCceEeccc
Confidence 356667776 8888887 47889999 998888878889999999543211 1 1246899998764
Q ss_pred C-----------CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEeCCcccceee
Q psy9827 70 N-----------KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQNRRDEYEHVV 138 (627)
Q Consensus 70 ~-----------~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r~~~~~~~~v 138 (627)
. ..|++|..|.++|||+++||++||+|++|||.++.++.+..........++.+.|+|.|++......+
T Consensus 250 ~~~~a~~~gl~~~~G~~V~~V~~~spA~~aGL~~GD~I~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v 329 (436)
T 4a8c_A 250 SADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKPLEVEV 329 (436)
T ss_pred CHHHHHHhCCCCCcceEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEE
Confidence 2 36899999999999999999999999999999999988777666656778999999999876655444
Q ss_pred ecCCCCccccccCCeeeccCCeecCcCChHHHHHHHhhcCCeEEEEEeecccCCCCCCCccEEEEEeecCCCCCeee-ee
Q psy9827 139 ASQRGDSFHIKVNDRIMSANGLSLENVEYGTAVQVLRDSGSTVTLKVRRRIVLPASPEPQTLRVQLSKSRKKDDFGI-IL 217 (627)
Q Consensus 139 ~~~~~~~~~l~~~D~i~~vng~~l~~~~~~~~~~~l~~sg~~v~l~v~r~~~~p~~~~~~~~~V~L~k~~~~~~~gi-~~ 217 (627)
............. .....+.. ..+.. +.. ..
T Consensus 330 ~l~~~~~~~~~~~--------------------------~~~~gl~~----------------~~~~~------~~~~~~ 361 (436)
T 4a8c_A 330 TLDTSTSSSASAE--------------------------MITPALEG----------------ATLSD------GQLKDG 361 (436)
T ss_pred EECCCCccccccc--------------------------ccccCcee----------------eeccc------ccccCC
Confidence 3221110000000 00000000 00000 000 01
Q ss_pred CCcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEEEEEEeCCC
Q psy9827 218 GNKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 283 (627)
Q Consensus 218 ~~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~l~V~r~~~ 283 (627)
..|++|..|.++ ++|..+||++||+|++|||+++. +++++.++++..++.+.|.|.|++.
T Consensus 362 ~~gv~V~~V~~~----spA~~aGL~~GD~I~~vng~~v~--~~~~~~~~l~~~~~~v~l~v~R~g~ 421 (436)
T 4a8c_A 362 GKGIKIDEVVKG----SPAAQAGLQKDDVIIGVNRDRVN--SIAEMRKVLAAKPAIIALQIVRGNE 421 (436)
T ss_pred CCCEEEEEeCCC----CHHHHcCCCCCCEEEEECCEECC--CHHHHHHHHHhCCCeEEEEEEECCE
Confidence 247899999876 46667789999999999999999 8999999999988899999999754
No 13
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.81 E-value=1.3e-18 Score=169.37 Aligned_cols=176 Identities=21% Similarity=0.304 Sum_probs=132.6
Q ss_pred CceEEEeccC--CceeEEEEccC--CCCEEEEEeCCCChhhhc-CCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeE
Q psy9827 50 DPRFITFQKE--GSVGIRLTGGN--KVGIFVTAVQPGSPASLQ-GLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIH 124 (627)
Q Consensus 50 ~~r~v~l~k~--g~lG~~i~g~~--~~gi~V~~V~~gspA~~a-GL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~ 124 (627)
..+.+.+.+. ++|||++.++. ..+++|..|.+||||+++ ||++||+|++|||.++.++++.++..+++..++.|.
T Consensus 7 ~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~ 86 (200)
T 2qt5_A 7 GSTVVELMKKEGTTLGLTVSGGIDKDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKNVGERVV 86 (200)
T ss_dssp EEEEEEEECCTTCCCCEEEECCTTSSSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHHTCCSEEE
T ss_pred CCEEEEEEeCCCCCCCEEEecccCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 4566777653 48999999874 357999999999999999 899999999999999999999999988888899999
Q ss_pred EEEEeCCcccceeeecCCCCccccccCCeeeccCCeecCcCChHHHHHHHhhcCCeEEEEEeecccCCCCCCCccEEEEE
Q psy9827 125 LIVQNRRDEYEHVVASQRGDSFHIKVNDRIMSANGLSLENVEYGTAVQVLRDSGSTVTLKVRRRIVLPASPEPQTLRVQL 204 (627)
Q Consensus 125 L~v~r~~~~~~~~v~~~~~~~~~l~~~D~i~~vng~~l~~~~~~~~~~~l~~sg~~v~l~v~r~~~~p~~~~~~~~~V~L 204 (627)
|+|.|+.+... .++. ... ...+.|.+
T Consensus 87 l~v~R~~~~~~---------------------~~g~-------------------~~~--------------~~~~~v~l 112 (200)
T 2qt5_A 87 LEVEYELPPVS---------------------IQGS-------------------SVM--------------FRTVEVTL 112 (200)
T ss_dssp EEEEEECCCCC---------------------CCCS-------------------SEE--------------EEEEEEEE
T ss_pred EEEeccCCCcc---------------------cCCC-------------------ccc--------------eeEEEEEE
Confidence 99998543210 0000 000 01123333
Q ss_pred eecCCCCCeeeeeC--------CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEE
Q psy9827 205 SKSRKKDDFGIILG--------NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLS 275 (627)
Q Consensus 205 ~k~~~~~~~gi~~~--------~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~ 275 (627)
.+.....+|.+..+ .+++|..|.++ ++|..+| |++||+|++|||+++.+++++++..+|+..+..+.
T Consensus 113 ~~~~~~lG~~l~~g~~~~~~~~~g~~V~~v~~~----s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~ 188 (200)
T 2qt5_A 113 HKEGNTFGFVIRGGAHDDRNKSRPVVITCVRPG----GPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQEAT 188 (200)
T ss_dssp ECBTTBCSEEEEEECCSSTTTCEEEEEEEECTT----SHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEE
T ss_pred ecCCCCeEEEEECCCCCCccCCCCEEEEEECCC----ChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 33222233332221 37899999887 3455566 99999999999999999999999999999778999
Q ss_pred EEEEeCCC
Q psy9827 276 LTIRREVP 283 (627)
Q Consensus 276 l~V~r~~~ 283 (627)
|.|.|+..
T Consensus 189 l~v~R~~~ 196 (200)
T 2qt5_A 189 LLIEYDVS 196 (200)
T ss_dssp EEEEEEEE
T ss_pred EEEEECCc
Confidence 99999653
No 14
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.80 E-value=2e-18 Score=167.45 Aligned_cols=171 Identities=23% Similarity=0.394 Sum_probs=130.1
Q ss_pred CCceEEEeccC--CceeEEEEccC------CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcC
Q psy9827 49 PDPRFITFQKE--GSVGIRLTGGN------KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSL 119 (627)
Q Consensus 49 ~~~r~v~l~k~--g~lG~~i~g~~------~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~ 119 (627)
++.+.+.+.+. ++|||++.++. ..+++|..|.+||||+++| |++||+|++|||.++.++++.++..++...
T Consensus 5 ~~~~~v~l~~~~~~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 84 (196)
T 1p1d_A 5 TETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDS 84 (196)
T ss_dssp CEEEEEEEECBTTTBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTC
T ss_pred cEEEEEEEEeCCCCccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 45677778775 58999999972 3579999999999999999 999999999999999998888888888755
Q ss_pred --CCeeEEEEEeCCcccceeeecCCCCccccccCCeeeccCCeecCcCChHHHHHHHhhcCCeEEEEEeecccCCCCCCC
Q psy9827 120 --QDQIHLIVQNRRDEYEHVVASQRGDSFHIKVNDRIMSANGLSLENVEYGTAVQVLRDSGSTVTLKVRRRIVLPASPEP 197 (627)
Q Consensus 120 --g~~V~L~v~r~~~~~~~~v~~~~~~~~~l~~~D~i~~vng~~l~~~~~~~~~~~l~~sg~~v~l~v~r~~~~p~~~~~ 197 (627)
+..+.|++.|+...... + ..
T Consensus 85 ~~g~~v~l~v~R~~~~~~~--~--------------------------------------------------------~~ 106 (196)
T 1p1d_A 85 SITSKVTLEIEFDVAESVI--P--------------------------------------------------------SS 106 (196)
T ss_dssp CSSSEEEEEEEECSCSCCB--C--------------------------------------------------------CS
T ss_pred CCCCeEEEEEEecCCCCCC--C--------------------------------------------------------CC
Confidence 78999999886532110 0 00
Q ss_pred ccEEEEEeecCCCCCeeeee--------CCcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHH
Q psy9827 198 QTLRVQLSKSRKKDDFGIIL--------GNKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLID 268 (627)
Q Consensus 198 ~~~~V~L~k~~~~~~~gi~~--------~~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~ 268 (627)
....+.+.+. ....+|+.+ ..+++|..|.++ ++|..+| |++||+|++|||+++.+++++++..+|+
T Consensus 107 ~~~~v~l~~~-~~~~lG~~~~~~~~~~~~~gv~V~~V~~~----s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~ 181 (196)
T 1p1d_A 107 GTFHVKLPKK-HSVELGITISSPSSRKPGDPLVISDIKKG----SVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQ 181 (196)
T ss_dssp SCEEEEECCC-SSCCCCCEEECSCSSSTTCCCEEEECCSS----SHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHH
T ss_pred CcEEEEecCC-CCCCcCEEEECCCCCCCCCCEEEEEECCC----CcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 0111222211 112233333 357999999886 4555667 9999999999999999878999999999
Q ss_pred cCCCeEEEEEEeCC
Q psy9827 269 SSKEKLSLTIRREV 282 (627)
Q Consensus 269 ~~~~~v~l~V~r~~ 282 (627)
..+..+.|.|.|++
T Consensus 182 ~~~~~v~l~v~R~~ 195 (196)
T 1p1d_A 182 QCEDLVKLKIRKDE 195 (196)
T ss_dssp HCTTCEEEEEECCC
T ss_pred hCCCEEEEEEEeCC
Confidence 88889999999865
No 15
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=99.79 E-value=1.5e-19 Score=196.98 Aligned_cols=227 Identities=20% Similarity=0.255 Sum_probs=153.1
Q ss_pred cccccccCC-CCCCCCCC-------CceeeeecccccCCCCCccccccCCCCceEEE----e-----ccCCceeEEEEcc
Q psy9827 7 RFITFQKEG-SVGIRLTG-------GNKVGIFVTAVQPGSPDLFSIFFVEPDPRFIT----F-----QKEGSVGIRLTGG 69 (627)
Q Consensus 7 ~~~~~~~~~-~~~~~~~~-------g~~iGin~~ai~~~~~d~~~~~~~~~~~r~v~----l-----~k~g~lG~~i~g~ 69 (627)
.|..+.+++ ++++++|+ |++|||| +++....++..+++|++|...... + ...++||++++..
T Consensus 189 ~~~~~iqtda~i~~GnSGGPl~n~~G~VIGI~-t~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~r~~lGv~~~~~ 267 (451)
T 3pv2_A 189 GVENFIQTDAAINPGNSGGALVNAKGELIGIN-TAILSPYGGNVGIGFAIPINMVKDVAQQIIKFGSIHRGLMGIFVQHL 267 (451)
T ss_dssp ---CCEEESSCCCGGGTTSEEEETTCCEEEEE-ECCC------CCCEEEEEHHHHHHHHHHHHHHSSCCCCBCCEEEEEC
T ss_pred CcceEEEEecccCCCCCcCcccCCCCeEEEEE-eEeecCCCCccceeeeehhHHHHHHHHHHHhcCCcccccccceEEec
Confidence 355666776 88988884 7788999 998887778889999999443221 1 1246899999864
Q ss_pred C-----------C-CCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEeCCccccee
Q psy9827 70 N-----------K-VGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQNRRDEYEHV 137 (627)
Q Consensus 70 ~-----------~-~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r~~~~~~~~ 137 (627)
. . .|++|..|.++|||+++||++||+|++|||.++.++.+..........++.|.|+|.|++......
T Consensus 268 ~~~~a~~~gl~~~~~G~~V~~V~~~spA~~aGL~~GDvI~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~~~~ 347 (451)
T 3pv2_A 268 TPELAQAMGYPEDFQGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQVKTTISLLRVGSTVKIIVERDNKPLTLS 347 (451)
T ss_dssp CHHHHHHTTSCTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHHHTSCTTCEEEEEEEETTEEEEEE
T ss_pred cHHHHHhcCCCcCCceEEEEecCCCChHHHcCCCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEE
Confidence 2 2 689999999999999999999999999999999998776666555578899999999987665544
Q ss_pred eecCCCCccccccCCeeeccCCeecCcCChHHHHHHHhhcCCeEEEEEeecccCCCCCCCccEEEEEeecCCCCCeeeee
Q psy9827 138 VASQRGDSFHIKVNDRIMSANGLSLENVEYGTAVQVLRDSGSTVTLKVRRRIVLPASPEPQTLRVQLSKSRKKDDFGIIL 217 (627)
Q Consensus 138 v~~~~~~~~~l~~~D~i~~vng~~l~~~~~~~~~~~l~~sg~~v~l~v~r~~~~p~~~~~~~~~V~L~k~~~~~~~gi~~ 217 (627)
+........ ..........-....+....+ .... . ..
T Consensus 348 v~l~~~~~~---------------------~~~~~~~~~~~~G~~l~~~~~------------------~~~~--~--~~ 384 (451)
T 3pv2_A 348 AVVTDIKSH---------------------EQKLQSNNPFLYGLALRAFEQ------------------ESPP--H--GN 384 (451)
T ss_dssp EECBCHHHH---------------------HHHHHHHSTTTTTEEEEEEEE------------------ECTT--S--CE
T ss_pred EEEccCCcc---------------------ccccccccccccccccccCCh------------------hHhc--c--cC
Confidence 432111000 000000000000011111000 0000 0 11
Q ss_pred CCcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEEEEEEeCCC
Q psy9827 218 GNKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 283 (627)
Q Consensus 218 ~~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~l~V~r~~~ 283 (627)
..|++|..|.++ ++|..+||++||+|++|||+++. +.+++.++|+..++.+.|.|.|++.
T Consensus 385 ~~Gv~V~~V~~g----spA~~aGL~~GD~I~~Vng~~v~--~~~~~~~~l~~~~~~v~l~v~R~g~ 444 (451)
T 3pv2_A 385 VIGVQVVGASEN----SAGWRAGIRPGDIIISANKKPVT--DVKSLQTIAQEKKKELLVQVLRGPG 444 (451)
T ss_dssp EEEEEEEEECTT----SHHHHHTCCTTCEEEEETTEECC--SHHHHHHHTTSSCSCEEEEEEETTE
T ss_pred CCceEEEEECCC----CHHHHcCCCCCCEEEEECCEECC--CHHHHHHHHhcCCCeEEEEEEECCE
Confidence 247899999876 46667789999999999999999 8999999999988899999999754
No 16
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.74 E-value=1.1e-16 Score=151.05 Aligned_cols=159 Identities=27% Similarity=0.452 Sum_probs=122.6
Q ss_pred CCceEEEeccC--CceeEEEEccCCCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHh-cCCCeeEE
Q psy9827 49 PDPRFITFQKE--GSVGIRLTGGNKVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLL-SLQDQIHL 125 (627)
Q Consensus 49 ~~~r~v~l~k~--g~lG~~i~g~~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~-~~g~~V~L 125 (627)
+.+|.+.+.+. ++|||++... +.|++|..|.+||||+++||++||+|++|||.++.++++..+..++. ..++.+.|
T Consensus 3 ~~~r~v~l~k~~~~~lG~~~~~~-~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~~v~l 81 (166)
T 1w9e_A 3 MDPREVILCKDQDGKIGLRLKSI-DNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITM 81 (166)
T ss_dssp CCCEEEEEECCTTSCCSEEEEEE-TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEE
T ss_pred CCCEEEEEEeCCCCcEeEEEEeC-CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEE
Confidence 57899998874 6899999886 46899999999999999999999999999999999999855555554 56679999
Q ss_pred EEEeCCcccceeeecCCCCccccccCCeeeccCCeecCcCChHHHHHHHhhcCCeEEEEEeecccCCCCCCCccEEEEEe
Q psy9827 126 IVQNRRDEYEHVVASQRGDSFHIKVNDRIMSANGLSLENVEYGTAVQVLRDSGSTVTLKVRRRIVLPASPEPQTLRVQLS 205 (627)
Q Consensus 126 ~v~r~~~~~~~~v~~~~~~~~~l~~~D~i~~vng~~l~~~~~~~~~~~l~~sg~~v~l~v~r~~~~p~~~~~~~~~V~L~ 205 (627)
++++...... +.+.
T Consensus 82 ~vr~~~~~~~------------------------------------------------------------------v~l~ 95 (166)
T 1w9e_A 82 TIRDRPFERT------------------------------------------------------------------ITMH 95 (166)
T ss_dssp EEECCTTCEE------------------------------------------------------------------EEEE
T ss_pred EEEcCCCcEE------------------------------------------------------------------EEEe
Confidence 9953222111 1111
Q ss_pred ecCCCCCeeeeeCCcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEEEEEEe
Q psy9827 206 KSRKKDDFGIILGNKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRR 280 (627)
Q Consensus 206 k~~~~~~~gi~~~~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~l~V~r 280 (627)
+. ....+|+....+ +|..|.++ ++|..++|++||+|++|||.++.++..+++...+.+.+..+.+.+.+
T Consensus 96 ~~-~~~~lG~~~~~g-~v~~v~~~----s~a~~aGl~~GD~I~~ing~~v~~~~~~~v~~~v~r~g~~~~l~v~~ 164 (166)
T 1w9e_A 96 KD-STGHVGFIFKNG-KITSIVKD----SSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP 164 (166)
T ss_dssp CC-TTSCCSEEEETT-EEEEECTT----SHHHHTTCCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEEE
T ss_pred cC-CCCcEeEEEeCC-EEEEEccC----CHHHHcCCCCCCEEEEECCEECCCCChHHHHHHHhhCCCEEEEEEEE
Confidence 10 012344444345 78999876 45666789999999999999999999999998899988888888765
No 17
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1
Probab=99.71 E-value=8.8e-17 Score=153.54 Aligned_cols=147 Identities=18% Similarity=0.274 Sum_probs=114.0
Q ss_pred CCCceEEEeCcc---HHHHHHHHhhhCCCCcccCC---------------CCCCCCHHHHHHHHhccccc-----CCcee
Q psy9827 452 GFIRPVVLFGPV---ADLARDKLLKDFPDKFSAPR---------------KFNFILWATIKDTAMYQSSK-----EPGMY 508 (627)
Q Consensus 452 ~~~RpvVl~Gp~---k~~l~~~Ll~~~p~~f~~~~---------------~~~Fvs~e~f~~~i~~~~~~-----~~~~Y 508 (627)
...+.++|+||+ |+||.+.|...+|..|..++ ..+|++.+.|..++..+.+. .+|+|
T Consensus 3 ~~g~~i~i~GpsGsGKSTL~~~L~~~~~~~~~~~i~~ttr~~~~ge~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~n~y 82 (180)
T 1kgd_A 3 HMRKTLVLLGAHGVGRRHIKNTLITKHPDRFAYPIPHTTRPPKKDEENGKNYYFVSHDQMMQDISNNEYLEYGSHEDAMY 82 (180)
T ss_dssp CCCCEEEEECCTTSSHHHHHHHHHHHCTTTEECCCCEECSCC---CCBTTTBEECCHHHHHHHHHTTCEEEEEEETTEEE
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHhhCCccEEEeeeccCCCCCccccCCCeeEEeCHHHHHHHHHcCCceEEEEEcCccc
Confidence 356899999999 99999999988875443321 12699999999988655432 47888
Q ss_pred -----hHHhHHhCCCcEEEecC-Cce-eccccCCCCceeEEEEcCCCcccCCCCCHHHHHHHHHHHHHHHHHhcCcccEE
Q psy9827 509 -----QGKDSMYQGKDSMYQGK-ESM-YQGKDSMYQGKDSMYQGKDSMYQGKDIKKEVKIKLFEQSQKLEKVWSHVFTGT 581 (627)
Q Consensus 509 -----~V~~v~~~gk~ciLdi~-~~l-~~~~~~~~P~~~vIFI~ppsl~~~~~~~e~~~~~~~~~~~~~e~~~~~~fd~v 581 (627)
+|++++++|++||||++ +.+ ..+.....++ +|||.|||++.+.+. +++.+++..+..+++..|.++||++
T Consensus 83 g~~~~~i~~~l~~g~~vil~id~~g~~~~~~~~~~~~--~ifi~~p~~~~l~~R-~~~i~r~~~~~~~~~~~~~~~~d~~ 159 (180)
T 1kgd_A 83 GTKLETIRKIHEQGLIAILDVEPQALKVLRTAEFAPF--VVFIAAPTITPGLNE-DESLQRLQKESDILQRTYAHYFDLT 159 (180)
T ss_dssp EEEHHHHHHHHHTTCEEEEECCGGGHHHHSSTTTCEE--EEEEECCSCCTTSCC-SHHHHHHHHHHHHHHHHHGGGCSEE
T ss_pred cccHHHHHHHHHCCCeEEEEECHHHHHHHHHhCCCcE--EEEEECCCHHHHHhh-HHHHHHHHHHHHHHHHhhhCCCcEE
Confidence 69999999999999999 555 4433233456 999999998888443 4447666555556766789999999
Q ss_pred EECCCHHHHHHHHHHHHHhh
Q psy9827 582 ITLSGVDVWYRKTRELIEKQ 601 (627)
Q Consensus 582 i~n~~l~~~~~~l~~~i~~~ 601 (627)
|+||++++++++|.++|.+.
T Consensus 160 i~n~~~~~~~~~l~~~i~~~ 179 (180)
T 1kgd_A 160 IINNEIDETIRHLEEAVELV 179 (180)
T ss_dssp EECSSHHHHHHHHHHHHHHH
T ss_pred EECcCHHHHHHHHHHHHHHh
Confidence 99999999999999999764
No 18
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=99.71 E-value=4.4e-19 Score=193.06 Aligned_cols=214 Identities=22% Similarity=0.319 Sum_probs=98.2
Q ss_pred ccccccCC-CCCCCCC-------CCceeeeecccccCCCCCccccccCCCCceEEE----ec-----cCCceeEEEEccC
Q psy9827 8 FITFQKEG-SVGIRLT-------GGNKVGIFVTAVQPGSPDLFSIFFVEPDPRFIT----FQ-----KEGSVGIRLTGGN 70 (627)
Q Consensus 8 ~~~~~~~~-~~~~~~~-------~g~~iGin~~ai~~~~~d~~~~~~~~~~~r~v~----l~-----k~g~lG~~i~g~~ 70 (627)
|..+.|++ +++++++ .|++|||| +++....++..+++|++|...... +. ..+.||+++....
T Consensus 195 ~~~~iqtda~i~~GnSGGpl~n~~G~vvGI~-~~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~~~~LGv~~~~~~ 273 (448)
T 1ky9_A 195 YENFIQTDAAINRGNAGGALVNLNGELIGIN-TAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELN 273 (448)
T ss_dssp CCCCEEESCCCTTSCCCSEEECTTSCEEEEE-ECSSTTSCCCSSSEEEEEHHHHHHHHHHHHHHSSCCBCCCCCSCCCTT
T ss_pred ccCEEEEcCCCCCCCCCCeeECCCCEEEEEE-EEeecCCCCccceeeeeecccchhhHHHHhhhcccceecccccccccc
Confidence 56677777 8899887 58899999 888776667788999988543221 11 2357898876532
Q ss_pred -----------CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEeCCcccceeee
Q psy9827 71 -----------KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQNRRDEYEHVVA 139 (627)
Q Consensus 71 -----------~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r~~~~~~~~v~ 139 (627)
..|++|..|.++|||+++||++||+|++|||..+.++.+..........++.|.|+|.|++......+.
T Consensus 274 ~~~a~~lgl~~~~G~~V~~V~~gspA~~AGL~~GDvI~~inG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 353 (448)
T 1ky9_A 274 SELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLE 353 (448)
T ss_dssp SHHHHTSCCTTCCSEECCCCTTCSSSTTTTCCTTCEECBSSSSBCCSSHHHHHHTTSSBTTCCCEEEEESSSCEEECCCC
T ss_pred HHHHHHhCCCCCCceEEEEeccCCHHHHcCCCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEE
Confidence 258999999999999999999999999999999999865544333335789999999987654333222
Q ss_pred cCCCCccccccCCeeeccCCeecCcCChHHHHHHHhhcCCeEEEEEeecccCCCCCCCccEEEEEeecCCCCCeeeee--
Q psy9827 140 SQRGDSFHIKVNDRIMSANGLSLENVEYGTAVQVLRDSGSTVTLKVRRRIVLPASPEPQTLRVQLSKSRKKDDFGIIL-- 217 (627)
Q Consensus 140 ~~~~~~~~l~~~D~i~~vng~~l~~~~~~~~~~~l~~sg~~v~l~v~r~~~~p~~~~~~~~~V~L~k~~~~~~~gi~~-- 217 (627)
....... . ..... .. ..-+|+.+
T Consensus 354 ~~~~~~~--------------~---~~~~~---~~-----------------------------------~~~~G~~l~~ 378 (448)
T 1ky9_A 354 LQQSSQN--------------Q---VDSSS---IF-----------------------------------NGIEGAEMSN 378 (448)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EecCCCc--------------c---ccccc---cc-----------------------------------ccccceEeec
Confidence 1100000 0 00000 00 00011111
Q ss_pred ---CCcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEEEEEEeCCC
Q psy9827 218 ---GNKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 283 (627)
Q Consensus 218 ---~~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~l~V~r~~~ 283 (627)
..|++|..|.++ ++|..+||++||+|++|||+++. +++++..+|+...+.+.|.|.|++.
T Consensus 379 ~~~~~gv~V~~V~~g----spA~~aGL~~GDiI~~vng~~v~--~~~~l~~~l~~~~~~v~l~v~R~g~ 441 (448)
T 1ky9_A 379 KGKDQGVVVNNVKTG----TPAAQIGLKKGDVIIGANQQAVK--NIAELRKVLDSKPSVLALNIQRGDS 441 (448)
T ss_dssp ---------------------------------------------------------------------
T ss_pred cCCCCeEEEEEecCC----CHHHHcCCCCCCEEEEECCEECC--CHHHHHHHHHcCCCeEEEEEEECCE
Confidence 247889999876 46667889999999999999999 8899999999877789999998764
No 19
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.70 E-value=3.5e-18 Score=182.75 Aligned_cols=171 Identities=14% Similarity=0.222 Sum_probs=76.4
Q ss_pred CccccccCCCCceEEEeccC--CceeEEEEccCC----CCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHH
Q psy9827 40 DLFSIFFVEPDPRFITFQKE--GSVGIRLTGGNK----VGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEA 112 (627)
Q Consensus 40 d~~~~~~~~~~~r~v~l~k~--g~lG~~i~g~~~----~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~ 112 (627)
|++..+......+.+.+.+. .+|||++.+... .+++|..|.+||||+++| |++||+|++|||.++.++++.++
T Consensus 194 d~~~~~~~~~~~~~V~i~k~~ge~lG~~i~~~~~g~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~ 273 (388)
T 3suz_A 194 DDLIHFSNSENCKELQLEKHKGEILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATC 273 (388)
T ss_dssp HHHHHTCCSSCCEEEEECCCSSCCCCCCCBCC---CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTH
T ss_pred chhhhhcccccceEEEEECCCCCceeEEEEecCCCCcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHH
Confidence 44555666677888988875 389999987532 368999999999999999 99999999999999999999888
Q ss_pred HHHHhc--CCCeeEEEEEeCCcccceeeecCCCCccccccCCeeeccCCeecCcCChHHHHHHHhhcCCeEEEEEeeccc
Q psy9827 113 VLFLLS--LQDQIHLIVQNRRDEYEHVVASQRGDSFHIKVNDRIMSANGLSLENVEYGTAVQVLRDSGSTVTLKVRRRIV 190 (627)
Q Consensus 113 ~~~l~~--~g~~V~L~v~r~~~~~~~~v~~~~~~~~~l~~~D~i~~vng~~l~~~~~~~~~~~l~~sg~~v~l~v~r~~~ 190 (627)
..+++. .+..+.|+|.|.+......+
T Consensus 274 ~~~l~~~~~~~~v~l~v~r~~~~~~v~l---------------------------------------------------- 301 (388)
T 3suz_A 274 QGIIKGLKNQTQVKLNIVSCPPVTTVLI---------------------------------------------------- 301 (388)
T ss_dssp HHHTTTCTTCSCEEEEEEECCSCC--------------------------------------------------------
T ss_pred HHHHHhccCCCccccccccccccceeeE----------------------------------------------------
Confidence 888875 45679999987543211100
Q ss_pred CCCCCCCccEEEEEeecCCCCCeeeeeCCcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcC
Q psy9827 191 LPASPEPQTLRVQLSKSRKKDDFGIILGNKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS 270 (627)
Q Consensus 191 ~p~~~~~~~~~V~L~k~~~~~~~gi~~~~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~ 270 (627)
.......++|+....+ +|..|.+| ++|..+||++||+|++|||+++.++++++++.+|++.
T Consensus 302 --------------~~~~~~~~lG~~i~~g-~I~~V~~g----s~A~~aGL~~GD~Il~VNg~~v~~~s~~~~~~~l~~~ 362 (388)
T 3suz_A 302 --------------KRPDLKYQLGFSVQNG-IICSLMRG----GIAERGGVRVGHRIIEINGQSVVATAHEKIVQALSNS 362 (388)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------eecCCCCccceEEecC-EEEEeecC----CHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 0000112344443333 78889876 3555677999999999999999999999999999999
Q ss_pred CCeEEEEEEeC
Q psy9827 271 KEKLSLTIRRE 281 (627)
Q Consensus 271 ~~~v~l~V~r~ 281 (627)
++.++|+|.+.
T Consensus 363 ~~~v~L~V~p~ 373 (388)
T 3suz_A 363 VGEIHMKTMPA 373 (388)
T ss_dssp -----------
T ss_pred CCeEEEEEEec
Confidence 99999999764
No 20
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=99.65 E-value=1.2e-15 Score=167.77 Aligned_cols=238 Identities=16% Similarity=0.150 Sum_probs=148.7
Q ss_pred ccccCC-CCCCCCCC-------CceeeeecccccCCCCCccccccCCCCceEEE----ecc------CCceeEEEEcc--
Q psy9827 10 TFQKEG-SVGIRLTG-------GNKVGIFVTAVQPGSPDLFSIFFVEPDPRFIT----FQK------EGSVGIRLTGG-- 69 (627)
Q Consensus 10 ~~~~~~-~~~~~~~~-------g~~iGin~~ai~~~~~d~~~~~~~~~~~r~v~----l~k------~g~lG~~i~g~-- 69 (627)
.+.|++ ++++++|+ |++|||| +++.... +..+++|++|...... +.+ .+.||++++..
T Consensus 187 ~~IQtDAaInpGnSGGPLvn~~GeVIGIn-tai~~~~-~~~gigfAIP~~~v~~vl~~l~~~G~~~~r~~LGv~~~~~~~ 264 (539)
T 4fln_A 187 LGIQIDAAINPGNSGGPAFNDQGECIGVA-FQVYRSE-ETENIGYVIPTTVVSHFLTDYERNGKYTGYPCLGVLLQKLEN 264 (539)
T ss_dssp EEEEESSCCCTTTTTSEEECSSSCEEEEE-CCCC------CCCEEEEEHHHHHHHHHHHHTTTSCCCCCBCCEEEEECCC
T ss_pred eEEEEEeEecCCCccchhccCCCcEEEEE-EEEecCC-CCCcceecccHHHHHHHHHHHHHcCeEEeeeecceEEEecCC
Confidence 456666 99999985 7899999 8887643 4468899999553321 211 35799998764
Q ss_pred ----------CCCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCH----------HHHHHHHhcCCCeeEEEEEe
Q psy9827 70 ----------NKVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITR----------EEAVLFLLSLQDQIHLIVQN 129 (627)
Q Consensus 70 ----------~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~----------~~~~~~l~~~g~~V~L~v~r 129 (627)
...|++|..|.|+|||+++ |++||+|++|||..+.+... .......+.+|++|.|+|.|
T Consensus 265 ~~~~~~~~l~~~~Gv~V~~V~~~spA~~a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R 343 (539)
T 4fln_A 265 PALRECLKVPTNEGVLVRRVEPTSDASKV-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIR 343 (539)
T ss_dssp HHHHHHHTCSSSBCEEEEEECTTSGGGGT-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEE
T ss_pred HHHHHhcCCCCcCceeeecccCCChHHhC-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEE
Confidence 1369999999999999986 99999999999999976432 23334445789999999999
Q ss_pred CCcccceeeecCCCCcccc----ccCCeeeccCCeecCcCChHHHHHHHhhcCCeEEEEEeecccCCCCCCCccEEEEEe
Q psy9827 130 RRDEYEHVVASQRGDSFHI----KVNDRIMSANGLSLENVEYGTAVQVLRDSGSTVTLKVRRRIVLPASPEPQTLRVQLS 205 (627)
Q Consensus 130 ~~~~~~~~v~~~~~~~~~l----~~~D~i~~vng~~l~~~~~~~~~~~l~~sg~~v~l~v~r~~~~p~~~~~~~~~V~L~ 205 (627)
+++.....++.......-. .........-|..+..++.... .+.+.. ...+.+.
T Consensus 344 ~Gk~~~v~Vtl~~~~~~~~~~~~~~~p~~~~~~Gl~f~~Lt~~~~----~~~~~~------------------~~~~~l~ 401 (539)
T 4fln_A 344 AGEHKKVQVVLRPRVHLVPYHIDGGQPSYIIVAGLVFTPLSEPLI----EEECED------------------TIGLKLL 401 (539)
T ss_dssp TTEEEEEEEECBCCCCSSCSCTTSSCCCCCCSTTEEEEECCHHHH----TTSCSS------------------SSCHHHH
T ss_pred CCEEEEEEEEEccCccccccccccCCCccccccceEEeeCCHHHH----Hhhccc------------------ccCceee
Confidence 9988776665432211000 0000111122333333333211 000000 0000000
Q ss_pred ecCCCCCeeeeeCCcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCC-eEEEEE
Q psy9827 206 KSRKKDDFGIILGNKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKE-KLSLTI 278 (627)
Q Consensus 206 k~~~~~~~gi~~~~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~-~v~l~V 278 (627)
..............+++|+.|.++ +++...+++.||+|++|||++|. +.+++.++|+++++ -+.|.+
T Consensus 402 ~~~~~~~~~~~~~~gVvvs~V~~~----s~a~~~g~~~gdiI~~vNg~~V~--s~~~l~~~l~~~k~~~l~~~~ 469 (539)
T 4fln_A 402 TKARYSVARFRGEQIVILSQVLAN----EVNIGYEDMNNQQVLKFNGIPIR--NIHHLAHLIDMCKDKYLVFEF 469 (539)
T ss_dssp HHHHHCCCSSTTCCCEEEEEECCC----GGGTTCSSCCSEEEEEETTEECC--SHHHHHHHHHTCCSSEEEEEE
T ss_pred ehhhhhhhccCCceEEEEEEecCC----chhhhcCCCCCCEEEeECCEEcC--CHHHHHHHHHHcCCCeEEEEE
Confidence 000000000111258999999876 45666789999999999999999 99999999999876 455554
No 21
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes}
Probab=99.61 E-value=2.6e-15 Score=146.82 Aligned_cols=148 Identities=14% Similarity=0.089 Sum_probs=111.3
Q ss_pred CCceEEEeCcc---HHHHHHHHhhhCCCCcccC--------CC-------CCCCCHHHHHHHHhcccc-----cCCcee-
Q psy9827 453 FIRPVVLFGPV---ADLARDKLLKDFPDKFSAP--------RK-------FNFILWATIKDTAMYQSS-----KEPGMY- 508 (627)
Q Consensus 453 ~~RpvVl~Gp~---k~~l~~~Ll~~~p~~f~~~--------~~-------~~Fvs~e~f~~~i~~~~~-----~~~~~Y- 508 (627)
..+.|+|+||+ |+||.++|...+|..|... ++ ++|++.+.|.+++..+.+ +.+|+|
T Consensus 7 ~g~~i~l~GpsGsGKsTl~~~L~~~~~~~~~~~~~~~tr~~~~~e~~g~~y~~~~~~~f~~~~~~~~~le~~~~~~~~yg 86 (208)
T 3tau_A 7 RGLLIVLSGPSGVGKGTVREAVFKDPETSFDYSISMTTRLPREGEQDGVDYYFRSREVFEQAIKDGKMLEYAEYVGNYYG 86 (208)
T ss_dssp CCCEEEEECCTTSCHHHHHHHHHHSTTCCCEECCCEESSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEETTEEEE
T ss_pred CCcEEEEECcCCCCHHHHHHHHHhhCCCcEEEEEecccccCcCcccCCceeEEecHHHHHHHHhcCcEEEEEEEccccCC
Confidence 46789999999 9999999999887534431 11 279999999999866543 258888
Q ss_pred ----hHHhHHhCCCcEEEecC-Cce-eccccCCCCceeEEEEcCCCcccC-----CCC--CHHHHHHHHHHHHHHHHHhc
Q psy9827 509 ----QGKDSMYQGKDSMYQGK-ESM-YQGKDSMYQGKDSMYQGKDSMYQG-----KDI--KKEVKIKLFEQSQKLEKVWS 575 (627)
Q Consensus 509 ----~V~~v~~~gk~ciLdi~-~~l-~~~~~~~~P~~~vIFI~ppsl~~~-----~~~--~e~~~~~~~~~~~~~e~~~~ 575 (627)
.|++++++|++||||++ +.. ..+.....|+ +|||.|||.+.+ +|. ++++++++++++. .|..+.
T Consensus 87 ~~~~~i~~~l~~g~~vild~~~~g~~~~~~~~~~~~--~i~i~~ps~~~l~~Rl~~R~~~~~e~i~~Rl~~~~-~e~~~~ 163 (208)
T 3tau_A 87 TPLEYVEEKLAAGVDIFLEIEVQGAMQVRKAMPEGI--FIFLTPPDLSELKNRIIGRGTESMEVVEERMETAK-KEIEMM 163 (208)
T ss_dssp EEHHHHHHHHHTTCCEEEECCHHHHHHHHHHCTTSE--EEEEECTTTTTSSCC-------CCHHHHHHHHHHH-HHHHHG
T ss_pred CcHHHHHHHHHcCCeEEEEeeHHHHHHHHHhCCCeE--EEEEeCCCHHHHHHHHHhcCCCCHHHHHHHHHHHH-HHHHhh
Confidence 68999999999999999 433 2221123346 999999985544 232 4455777777764 466788
Q ss_pred CcccEEEECCCHHHHHHHHHHHHHhhCC
Q psy9827 576 HVFTGTITLSGVDVWYRKTRELIEKQQS 603 (627)
Q Consensus 576 ~~fd~vi~n~~l~~~~~~l~~~i~~~~~ 603 (627)
+.||++|+|+++++++++|..+|..+..
T Consensus 164 ~~~d~vivN~~~~~~~~~l~~~i~~~~~ 191 (208)
T 3tau_A 164 ASYDYAVVNDVVANAVQKIKGIVETEHL 191 (208)
T ss_dssp GGSSEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred ccCCEEEECcCHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999987644
No 22
>3a00_A Guanylate kinase, GMP kinase; domain movement, dimerization, acetylation, ATP-binding, nucleotide-binding, phosphoprotein, transferase; 1.80A {Saccharomyces cerevisiae} PDB: 1ex6_A* 1ex7_A 1gky_A* 2zzz_A 3sqk_A 4f4j_A 2zzy_A
Probab=99.61 E-value=1e-15 Score=146.87 Aligned_cols=145 Identities=19% Similarity=0.257 Sum_probs=97.0
Q ss_pred CceEEEeCcc---HHHHHHHHhhhCCCCcccC--------CC-------CCCCCHHHHHHHHhcccc-----cCCcee--
Q psy9827 454 IRPVVLFGPV---ADLARDKLLKDFPDKFSAP--------RK-------FNFILWATIKDTAMYQSS-----KEPGMY-- 508 (627)
Q Consensus 454 ~RpvVl~Gp~---k~~l~~~Ll~~~p~~f~~~--------~~-------~~Fvs~e~f~~~i~~~~~-----~~~~~Y-- 508 (627)
.++++|+||+ |+||.+.|+..+|..|..+ .+ .+|++.+.|..++..+.+ +.+++|
T Consensus 1 ~~ii~l~GpsGaGKsTl~~~L~~~~~~~~~~~~~~~tr~~~~ge~~g~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~yg~ 80 (186)
T 3a00_A 1 SRPIVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGS 80 (186)
T ss_dssp CCCEEEESSSSSSHHHHHHHHHHHCGGGEECCCEEECSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEETTEEEEE
T ss_pred CCEEEEECCCCCCHHHHHHHHHhhCCccceEEeeccccCCCCCccCCeeeeecCHHHHHHHHhhcceeeEEEEeceeccC
Confidence 3789999999 9999999998887656542 11 158899999999865443 247888
Q ss_pred ---hHHhHHhCCCcEEEecC-Cce-eccc-cCCCCceeEEEEcCCCcccC-----CCC--CHHHHHHHHHHHHHHHHHhc
Q psy9827 509 ---QGKDSMYQGKDSMYQGK-ESM-YQGK-DSMYQGKDSMYQGKDSMYQG-----KDI--KKEVKIKLFEQSQKLEKVWS 575 (627)
Q Consensus 509 ---~V~~v~~~gk~ciLdi~-~~l-~~~~-~~~~P~~~vIFI~ppsl~~~-----~~~--~e~~~~~~~~~~~~~e~~~~ 575 (627)
.|++++++|++||||++ +.+ ..+. ....++ +|||.|||++.+ .|. ++++.+++++++.. |.++.
T Consensus 81 ~~~~i~~~l~~g~~~il~~~~~g~~~l~~~~~~~~~--~i~i~~p~~~~l~~Rl~~Rg~~~~~~i~~rl~~~~~-~~~~~ 157 (186)
T 3a00_A 81 TVASVKQVSKSGKTCILDIDMQGVKSVKAIPELNAR--FLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQA-ELAYA 157 (186)
T ss_dssp EHHHHHHHHHTTCEEEEECCHHHHHHHHTCGGGCCE--EEEEECSCC---------------------------------
T ss_pred cHHHHHHHHHcCCeEEEEEcHHHHHHHHHhcCCCeE--EEEEECcCHHHHHHHHHhcCCCCHHHHHHHHHHHHH-HHHhh
Confidence 78999999999999999 444 3333 356677 999999995544 333 34446666666543 33444
Q ss_pred --CcccEEEECCCHHHHHHHHHHHHHhh
Q psy9827 576 --HVFTGTITLSGVDVWYRKTRELIEKQ 601 (627)
Q Consensus 576 --~~fd~vi~n~~l~~~~~~l~~~i~~~ 601 (627)
++||++|+||++++++.+|.++|..+
T Consensus 158 ~~~~~d~vi~nd~~~~a~~~l~~~i~~~ 185 (186)
T 3a00_A 158 ETGAHDKVIVNDDLDKAYKELKDFIFAE 185 (186)
T ss_dssp -CCCCSEEEECSSHHHHHHHHHHHHTTC
T ss_pred cccCCcEEEECcCHHHHHHHHHHHHHhc
Confidence 89999999999999999999999754
No 23
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=99.57 E-value=1.2e-14 Score=142.07 Aligned_cols=146 Identities=16% Similarity=0.213 Sum_probs=107.3
Q ss_pred CCCCEEEEEeCCCChhhhcCCCCC-CEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEeCCcccceeeecCCCCcccc
Q psy9827 70 NKVGIFVTAVQPGSPASLQGLQPG-DKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQNRRDEYEHVVASQRGDSFHI 148 (627)
Q Consensus 70 ~~~gi~V~~V~~gspA~~aGL~~G-D~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r~~~~~~~~v~~~~~~~~~l 148 (627)
...|++|..|.++|||++|||++| |+|++|||.++.++++..........+..+.|+|.|.+......+...+...
T Consensus 14 ~~~G~~V~~V~~~SpA~~AGL~~G~D~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~~~~v~l~p~~~--- 90 (209)
T 3rle_A 14 GTEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSKTLELRETSVTPSNL--- 90 (209)
T ss_dssp SSEEEEEEEECTTSHHHHTTCCTTTEEEEEETTEECCSSSSHHHHHHHHTTTSCEEEEEEETTTCCEEEEEECCCSS---
T ss_pred CCCEEEEEEECCCCHHHHCCCCcCCeEEEEECCEECcCHHHHHHHHHhcCCCCEEEEEEEecCCceEEEEEEccccc---
Confidence 456899999999999999999999 9999999999999988776555567789999999986543222221100000
Q ss_pred ccCCeeeccCCeecCcCChHHHHHHHhhcCCeEEEEEeecccCCCCCCCccEEEEEeecCCCCCeeeee---------CC
Q psy9827 149 KVNDRIMSANGLSLENVEYGTAVQVLRDSGSTVTLKVRRRIVLPASPEPQTLRVQLSKSRKKDDFGIIL---------GN 219 (627)
Q Consensus 149 ~~~D~i~~vng~~l~~~~~~~~~~~l~~sg~~v~l~v~r~~~~p~~~~~~~~~V~L~k~~~~~~~gi~~---------~~ 219 (627)
.. ....+|+.. ..
T Consensus 91 ----------------~~------------------------------------------~~~~lGi~~~~~~~~~~~~~ 112 (209)
T 3rle_A 91 ----------------WG------------------------------------------GQGLLGVSIRFCSFDGANEN 112 (209)
T ss_dssp ----------------SS------------------------------------------SSSSSCEEEEEEECTTGGGS
T ss_pred ----------------cc------------------------------------------ccCccceEEeecChhHcccc
Confidence 00 000111111 14
Q ss_pred cEEEEEeccCCCCCCCCCCCCCCC-CCEEEEeCceeCCCCCHHHHHHHHHcC-CCeEEEEEEeCCC
Q psy9827 220 KIFVKEVTHRLDNNASPGTHQLAE-GDVLLKINNHPTDGMSVKEARKLIDSS-KEKLSLTIRREVP 283 (627)
Q Consensus 220 gi~V~~V~~g~~~~~~a~~~~L~~-GD~Il~VNg~~v~~~s~~e~~~~l~~~-~~~v~l~V~r~~~ 283 (627)
|++|..|.++ ++|..+||++ ||+|++|||. +. +.+++..+++.. +..+.|.|.|+..
T Consensus 113 Gv~V~~V~~~----spA~~aGl~~~GD~I~~ing~-v~--~~~~l~~~l~~~~g~~v~l~v~r~~~ 171 (209)
T 3rle_A 113 VWHVLEVESN----SPAALAGLRPHSDYIIGADTV-MN--ESEDLFSLIETHEAKPLKLYVYNTDT 171 (209)
T ss_dssp CEEEEEECTT----SHHHHHTCCTTTEEEEEESSC-CC--SSSCHHHHHHHTTTSCEEEEEEETTT
T ss_pred ceEEEEeCCC----ChHHHCCCCCCCCEEEECCCE-eC--CHHHHHHHHHhCCCCeEEEEEEECCc
Confidence 7899999876 4666789999 9999999998 77 778888888875 6689999988653
No 24
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.51 E-value=4.7e-14 Score=124.85 Aligned_cols=97 Identities=28% Similarity=0.395 Sum_probs=78.8
Q ss_pred cCCCCCccccccCCCCceEEEeccC-CceeEEEEccC-------CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCC
Q psy9827 35 QPGSPDLFSIFFVEPDPRFITFQKE-GSVGIRLTGGN-------KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMK 105 (627)
Q Consensus 35 ~~~~~d~~~~~~~~~~~r~v~l~k~-g~lG~~i~g~~-------~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~ 105 (627)
.....|||+.|+...+.+.+.+.+. ++|||++.++. +.|++|..|.+||||+++| |++||+|++|||.++.
T Consensus 9 ~~~~~dp~s~y~~~~~~~~v~l~k~~~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~ 88 (117)
T 2byg_A 9 SGVDLGTENLYFQSMTVVEIKLFKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLE 88 (117)
T ss_dssp -----------CEEEEEEEEEEECBTTBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECT
T ss_pred CccCCCCcccccCCCceEEEEEEeCCCCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC
Confidence 3456799999999999999998776 58999999863 3589999999999999999 9999999999999999
Q ss_pred CCCHHHHHHHHhcCCCeeEEEEEeCC
Q psy9827 106 GITREEAVLFLLSLQDQIHLIVQNRR 131 (627)
Q Consensus 106 ~~~~~~~~~~l~~~g~~V~L~v~r~~ 131 (627)
++++.+++..++..+..|.|+|.|..
T Consensus 89 ~~~~~~~~~~l~~~g~~v~l~v~R~~ 114 (117)
T 2byg_A 89 EVTHEEAVAILKNTSEVVYLKVGKPT 114 (117)
T ss_dssp TCCHHHHHHHHHTCCSEEEEEEEEEE
T ss_pred CCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 99999999999988999999999854
No 25
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.50 E-value=9.7e-14 Score=121.82 Aligned_cols=100 Identities=18% Similarity=0.352 Sum_probs=75.8
Q ss_pred ccccCCCCCccccccCCCCceEEEeccC-CceeEEEEccC--CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCC
Q psy9827 32 TAVQPGSPDLFSIFFVEPDPRFITFQKE-GSVGIRLTGGN--KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGI 107 (627)
Q Consensus 32 ~ai~~~~~d~~~~~~~~~~~r~v~l~k~-g~lG~~i~g~~--~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~ 107 (627)
++.+....|+|+.++...+.+.+.+.+. ++|||++.++. ..|++|..|.++|||+++| |++||+|++|||.++.++
T Consensus 6 ~~~~~~~~d~~t~~~~~~~~~~v~l~~~~~glG~~l~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~ 85 (112)
T 2r4h_A 6 HHSSGVDLGTENLYFQSMDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNM 85 (112)
T ss_dssp -----------------CCEEEEEEECBTTBTSEEEEECGGGTCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTC
T ss_pred cccccCCCCCcccccCCCceEEEEEEcCCCccCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCC
Confidence 4556677899999999999999999886 48999999874 4689999999999999999 999999999999999999
Q ss_pred CHHHHHHHHhcCCCeeEEEEEeCC
Q psy9827 108 TREEAVLFLLSLQDQIHLIVQNRR 131 (627)
Q Consensus 108 ~~~~~~~~l~~~g~~V~L~v~r~~ 131 (627)
++.++...++..+..|.|+|.|+.
T Consensus 86 ~~~~~~~~l~~~g~~v~l~v~R~~ 109 (112)
T 2r4h_A 86 KHSRAIELIKNGGRRVRLFLKRGE 109 (112)
T ss_dssp CHHHHHHHHHTTTTEEEEEEECCE
T ss_pred CHHHHHHHHHcCCCeEEEEEEeCC
Confidence 999999888888999999998754
No 26
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A*
Probab=99.46 E-value=2.7e-13 Score=133.50 Aligned_cols=147 Identities=16% Similarity=0.087 Sum_probs=108.0
Q ss_pred CCCceEEEeCcc---HHHHHHHHhhhCCC---Cccc------CCCC-------CCCCHHHHHHHHhccccc-----CCce
Q psy9827 452 GFIRPVVLFGPV---ADLARDKLLKDFPD---KFSA------PRKF-------NFILWATIKDTAMYQSSK-----EPGM 507 (627)
Q Consensus 452 ~~~RpvVl~Gp~---k~~l~~~Ll~~~p~---~f~~------~~~~-------~Fvs~e~f~~~i~~~~~~-----~~~~ 507 (627)
...+.++|+||+ |+||.+.|+...|. .+.. +++. +|++.+.|+.++..|++. .+++
T Consensus 14 ~~G~ii~l~GpsGsGKSTLlk~L~g~~~p~~~~g~v~~ttr~~~~~e~~gi~y~fq~~~~f~~~~~~~~f~E~~~~~~~~ 93 (219)
T 1s96_A 14 AQGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHDEFKEMISRDAFLEHAEVFGNY 93 (219)
T ss_dssp -CCCEEEEECCTTSCHHHHHHHHHHHSCTTTEEECCCEECSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEETTEE
T ss_pred CCCcEEEEECCCCCCHHHHHHHHhccCCCCceEEEEEecCCCCCcccccCceEEECCHHHHHHHHhcCHHHHHHHHHhcc
Confidence 456899999999 99999999988762 2222 1111 488999999987654432 4777
Q ss_pred e-----hHHhHHhCCCcEEEecC-Cce--eccccCCCCceeEEEEcCCCcccC-----CC--CCHHHHHHHHHHHHHHHH
Q psy9827 508 Y-----QGKDSMYQGKDSMYQGK-ESM--YQGKDSMYQGKDSMYQGKDSMYQG-----KD--IKKEVKIKLFEQSQKLEK 572 (627)
Q Consensus 508 Y-----~V~~v~~~gk~ciLdi~-~~l--~~~~~~~~P~~~vIFI~ppsl~~~-----~~--~~e~~~~~~~~~~~~~e~ 572 (627)
| .|++++++|+.||||+| ... .. ++++-..+|||.||+++.+ .+ .+++++++++.++. .|.
T Consensus 94 yg~~~~~v~~~l~~G~illLDLD~~~~~~i~---~~l~~~~tI~i~th~~~~l~~Rl~~rG~~~~e~i~~rl~~a~-~e~ 169 (219)
T 1s96_A 94 YGTSREAIEQVLATGVDVFLDIDWQGAQQIR---QKMPHARSIFILPPSKIELDRRLRGRGQDSEEVIAKRMAQAV-AEM 169 (219)
T ss_dssp EEEEHHHHHHHHTTTCEEEEECCHHHHHHHH---HHCTTCEEEEEECSSHHHHHHHHHTTSCSCHHHHHHHHHHHH-HHH
T ss_pred CCCCHHHHHHHHhcCCeEEEEECHHHHHHHH---HHccCCEEEEEECCCHHHHHHHHHHcCCCCHHHHHHHHHHHH-HHH
Confidence 7 68999999999999999 322 22 2222222999999996543 33 45565777776664 466
Q ss_pred HhcCcccEEEECCCHHHHHHHHHHHHHhhC
Q psy9827 573 VWSHVFTGTITLSGVDVWYRKTRELIEKQQ 602 (627)
Q Consensus 573 ~~~~~fd~vi~n~~l~~~~~~l~~~i~~~~ 602 (627)
.+.+.||++|+|||+++|+.+|+++|..+.
T Consensus 170 ~~~~~~d~~i~Nd~l~~a~~~l~~ii~~~~ 199 (219)
T 1s96_A 170 SHYAEYDYLIVNDDFDTALTDLKTIIRAER 199 (219)
T ss_dssp TTGGGSSEEEECSSHHHHHHHHHHHHHHHH
T ss_pred hhccCCCEEEECcCHHHHHHHHHHHHHHHH
Confidence 778899999999999999999999997653
No 27
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.45 E-value=2.2e-13 Score=120.65 Aligned_cols=93 Identities=27% Similarity=0.519 Sum_probs=80.8
Q ss_pred CCccccccCCCCceEEEeccC--CceeEEEEccC-----CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHH
Q psy9827 39 PDLFSIFFVEPDPRFITFQKE--GSVGIRLTGGN-----KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITRE 110 (627)
Q Consensus 39 ~d~~~~~~~~~~~r~v~l~k~--g~lG~~i~g~~-----~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~ 110 (627)
.+++..|+..+.++.+.+.+. ++|||++.++. ..|++|..|.+||||+++| |++||+|++|||.++.++++.
T Consensus 13 ~~~~~~~~~~~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~ 92 (118)
T 3b76_A 13 LGTENLYFQSMHEKVVNIQKDPGESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRS 92 (118)
T ss_dssp -----CCCEEEEEEEEEEECCTTCCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHH
T ss_pred CCccccccCCCCcEEEEEEeCCCCccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHH
Confidence 567888999999999999876 48999999974 3589999999999999999 999999999999999999999
Q ss_pred HHHHHHhcCCCeeEEEEEeCC
Q psy9827 111 EAVLFLLSLQDQIHLIVQNRR 131 (627)
Q Consensus 111 ~~~~~l~~~g~~V~L~v~r~~ 131 (627)
+++.+++..++.|+|+|.|..
T Consensus 93 ~~~~~l~~~~~~v~L~v~R~~ 113 (118)
T 3b76_A 93 EAVALLKRTSSSIVLKALEVK 113 (118)
T ss_dssp HHHHHHHSCCSEEEEEEEEEE
T ss_pred HHHHHHHcCCCeEEEEEEECC
Confidence 999999999999999998743
No 28
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.44 E-value=5.6e-13 Score=109.59 Aligned_cols=76 Identities=25% Similarity=0.414 Sum_probs=69.6
Q ss_pred CCceEEEeccC--CceeEEEEccCCCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEE
Q psy9827 49 PDPRFITFQKE--GSVGIRLTGGNKVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLI 126 (627)
Q Consensus 49 ~~~r~v~l~k~--g~lG~~i~g~~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~ 126 (627)
.++|.|.+.|. ++|||++.++ +|..|.+||||+++||++||+|++|||+++.+++|.+++.+++..+..|+|+
T Consensus 3 ~~~r~v~l~k~~~g~~Gf~i~~g-----~I~~v~~gspA~~aGl~~GD~Il~VNG~~v~~~~~~evv~llr~~g~~V~L~ 77 (82)
T 1r6j_A 3 MDPRTITMHKDSTGHVGFIFKNG-----KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTIT 77 (82)
T ss_dssp TCCEEEEEECCTTSCCCEEEETT-----EEEEECTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEEE
T ss_pred CceEEEEEEECCCCCeEEEEECC-----EEEEecCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEEEE
Confidence 57899999886 4799999865 3789999999999999999999999999999999999999999999999999
Q ss_pred EEe
Q psy9827 127 VQN 129 (627)
Q Consensus 127 v~r 129 (627)
|..
T Consensus 78 v~p 80 (82)
T 1r6j_A 78 IMP 80 (82)
T ss_dssp EEE
T ss_pred EEe
Confidence 874
No 29
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.43 E-value=1.2e-12 Score=110.04 Aligned_cols=84 Identities=27% Similarity=0.537 Sum_probs=76.4
Q ss_pred CCCceEEEeccC-CceeEEEEccC-CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEE
Q psy9827 48 EPDPRFITFQKE-GSVGIRLTGGN-KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHL 125 (627)
Q Consensus 48 ~~~~r~v~l~k~-g~lG~~i~g~~-~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L 125 (627)
.|.+|.+.+.+. ++|||++.++. ..|++|..|.++|||+++||++||+|++|||.++.++++.++...++..+..+.|
T Consensus 2 ~~~~r~v~l~k~~~g~G~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l 81 (90)
T 2he4_A 2 MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARL 81 (90)
T ss_dssp TTCCEEEEEECBTTBCCEEEEECSSSSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTSCHHHHHHHHTTSSSEEEE
T ss_pred CCCcEEEEEEECCCCccEEEEccCCCCCEEEEEECCCChHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEE
Confidence 578999999886 58999999875 3689999999999999999999999999999999999999999999888899999
Q ss_pred EEEeCC
Q psy9827 126 IVQNRR 131 (627)
Q Consensus 126 ~v~r~~ 131 (627)
++.|..
T Consensus 82 ~v~r~~ 87 (90)
T 2he4_A 82 LVVGPS 87 (90)
T ss_dssp EEECCC
T ss_pred EEEccC
Confidence 999754
No 30
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.41 E-value=5.7e-13 Score=117.56 Aligned_cols=99 Identities=27% Similarity=0.444 Sum_probs=87.7
Q ss_pred CCCCCccccccCCCCceEEEeccC-CceeEEEEccCC---CCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHH
Q psy9827 36 PGSPDLFSIFFVEPDPRFITFQKE-GSVGIRLTGGNK---VGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITRE 110 (627)
Q Consensus 36 ~~~~d~~~~~~~~~~~r~v~l~k~-g~lG~~i~g~~~---~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~ 110 (627)
+.+.|+|+.++...+.+.+.+.+. ++|||++.++.+ .+++|..|.++|||+++| |++||+|++|||.++.++++.
T Consensus 3 ~~~~Dp~s~~~~~~~~~~v~l~~~~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~ 82 (116)
T 2dm8_A 3 SGSSGPATCPIVPGQEMIIEISKGRSGLGLSIVGGKDTPLNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHE 82 (116)
T ss_dssp CSCCCSSSCCCCTTSCEEEEEECCSSCCCCCCBCCTTSSCSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHH
T ss_pred CCCCCcccCccCCCCEEEEEEEECCCcccEEEeCCCCCCcCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHH
Confidence 456799999999889999998776 589999998754 589999999999999999 999999999999999999999
Q ss_pred HHHHHHhcCCCeeEEEEEeCCccc
Q psy9827 111 EAVLFLLSLQDQIHLIVQNRRDEY 134 (627)
Q Consensus 111 ~~~~~l~~~g~~V~L~v~r~~~~~ 134 (627)
++...++..+..|.|+|.|+...+
T Consensus 83 ~~~~~l~~~~~~v~l~v~R~~~~~ 106 (116)
T 2dm8_A 83 EAITALRQTPQKVRLVVYRDEAHY 106 (116)
T ss_dssp HHHHHHHTCCSEEEEEEECCSSCC
T ss_pred HHHHHHHhCCCeEEEEEEeCCccc
Confidence 999888877899999999876543
No 31
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.41 E-value=6.1e-13 Score=117.84 Aligned_cols=95 Identities=33% Similarity=0.426 Sum_probs=79.8
Q ss_pred CCCCccccccCC----CCceEEEeccCCceeEEEEccCC---CCEEEEEeCCCChhhhc-CCCCCCEEEEECCEeCCCCC
Q psy9827 37 GSPDLFSIFFVE----PDPRFITFQKEGSVGIRLTGGNK---VGIFVTAVQPGSPASLQ-GLQPGDKILKVNDMDMKGIT 108 (627)
Q Consensus 37 ~~~d~~~~~~~~----~~~r~v~l~k~g~lG~~i~g~~~---~gi~V~~V~~gspA~~a-GL~~GD~Il~VnG~~v~~~~ 108 (627)
++.|||+.|... ...+.+.+.+.++|||++.++.+ ..++|..|.+||||+++ ||++||+|++|||.++.+++
T Consensus 1 ~~~dP~s~~~~~~~~~~~~~~~~~~~~~glG~~i~gg~~~~~~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~ 80 (118)
T 1v6b_A 1 GSEGAATMFSPEQIAGKDVRLLRIKKEGSLDLALEGGVDSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYT 80 (118)
T ss_dssp CCCCCCSSSCHHHHSSCCEEEEEEESCSCCCCEEEEBTTSSSCSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCB
T ss_pred CCCCCcceecccccCCceEEEEEECCCCccCEEEEcccCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCC
Confidence 467899987433 34677788888899999998743 34999999999999999 79999999999999999999
Q ss_pred HHHHHHHHhcC----CCeeEEEEEeCC
Q psy9827 109 REEAVLFLLSL----QDQIHLIVQNRR 131 (627)
Q Consensus 109 ~~~~~~~l~~~----g~~V~L~v~r~~ 131 (627)
+.++...++.. +..|+|+|.|.+
T Consensus 81 ~~~~~~~l~~~~~~~g~~v~l~v~r~~ 107 (118)
T 1v6b_A 81 LAEAEAALQKAWNQGGDWIDLVVAVCP 107 (118)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEEECCC
T ss_pred HHHHHHHHHHhhhcCCCeEEEEEEeCC
Confidence 99998887643 889999999854
No 32
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax}
Probab=99.40 E-value=1.8e-12 Score=125.90 Aligned_cols=148 Identities=16% Similarity=0.149 Sum_probs=108.2
Q ss_pred CCCCceEEEeCcc---HHHHHHHHhhhCCCCcccCC---------------CCCCCCHHHHHHHHhcccc-----cCCce
Q psy9827 451 PGFIRPVVLFGPV---ADLARDKLLKDFPDKFSAPR---------------KFNFILWATIKDTAMYQSS-----KEPGM 507 (627)
Q Consensus 451 ~~~~RpvVl~Gp~---k~~l~~~Ll~~~p~~f~~~~---------------~~~Fvs~e~f~~~i~~~~~-----~~~~~ 507 (627)
....++|+|+||+ |+||.++|.+.+|..|..++ ..+|++.++|..++..|.+ +.+++
T Consensus 9 ~~~~~~i~l~G~sGsGKsTl~~~L~~~~~~~~~~~~~~ttR~~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (204)
T 2qor_A 9 MARIPPLVVCGPSGVGKGTLIKKVLSEFPSRFRFSISCTTRNKREKETNGVDYYFVDKDDFERKLKEGQFLEFDKYANNF 88 (204)
T ss_dssp CCCCCCEEEECCTTSCHHHHHHHHHHHCTTTEEECCEEECSCCCTTCCBTTTEEECCHHHHHHHHHTTCEEEEEEETTEE
T ss_pred cccCCEEEEECCCCCCHHHHHHHHHHhCccceeeeeeecCCCCCCCCCCCcceeeCCHHHHHHHHHcCCCEEeHHhCCCe
Confidence 3457899999999 99999999998876344322 1269999999998876544 35778
Q ss_pred e-----hHHhHHhCCCcEEEecC-Cce-eccccCCC----CceeEEEEcCCCcccC-----CCC--CHHHHHHHHHHHHH
Q psy9827 508 Y-----QGKDSMYQGKDSMYQGK-ESM-YQGKDSMY----QGKDSMYQGKDSMYQG-----KDI--KKEVKIKLFEQSQK 569 (627)
Q Consensus 508 Y-----~V~~v~~~gk~ciLdi~-~~l-~~~~~~~~----P~~~vIFI~ppsl~~~-----~~~--~e~~~~~~~~~~~~ 569 (627)
| .|++++++|+.||+|++ +.+ ..+ ..+ ++ +|||.|+|.+.+ +|. +++++++++.+..+
T Consensus 89 ~~~~~~~i~~~l~~g~~vi~d~~~~~~~~l~--~~~~~~~~~--~i~l~~~s~e~l~~Rl~~R~~~~~~~i~~rl~~~~~ 164 (204)
T 2qor_A 89 YGTLKSEYDLAVGEGKICLFEMNINGVKQLK--ESKHIQDGI--YIFVKPPSIDILLGRLKNRNTEKPEEINKRMQELTR 164 (204)
T ss_dssp EEEEHHHHHHHHHTTCEEEEECCHHHHHHHH--HCSSCSCCE--EEEEECSCHHHHHHHHHTCTTSCHHHHHHHHHHHHH
T ss_pred ecCCHHHHHHHHHcCCeEEEEECHHHHHHHH--HhcCCCCeE--EEEEcCCCHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 8 68889999999999999 433 222 233 46 999998884433 333 45556665655532
Q ss_pred -HHHHhcCcccEEEECCCHHHHHHHHHHHHHhhC
Q psy9827 570 -LEKVWSHVFTGTITLSGVDVWYRKTRELIEKQQ 602 (627)
Q Consensus 570 -~e~~~~~~fd~vi~n~~l~~~~~~l~~~i~~~~ 602 (627)
++..|...||++|+|+++++++++|.++|..+.
T Consensus 165 ~~~~~~~~~~d~vi~n~~~e~~~~~i~~~i~~~~ 198 (204)
T 2qor_A 165 EMDEADKVGFNYFIVNDDLARTYAELREYLLGSY 198 (204)
T ss_dssp HHHHHHHHTCSEEEECSSHHHHHHHHHHHHHHHC
T ss_pred HHHHhhhccCcEEEECcCHHHHHHHHHHHHHHHh
Confidence 332277889999999999999999999998753
No 33
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.39 E-value=1.2e-12 Score=116.37 Aligned_cols=89 Identities=28% Similarity=0.463 Sum_probs=74.1
Q ss_pred ccCCCCceEEEeccCC--ceeEEEEccC-----CCCEEEEEeCCCChhhhc-CCCCCCEEEEECCEeCCCCCHHHHHHHH
Q psy9827 45 FFVEPDPRFITFQKEG--SVGIRLTGGN-----KVGIFVTAVQPGSPASLQ-GLQPGDKILKVNDMDMKGITREEAVLFL 116 (627)
Q Consensus 45 ~~~~~~~r~v~l~k~g--~lG~~i~g~~-----~~gi~V~~V~~gspA~~a-GL~~GD~Il~VnG~~v~~~~~~~~~~~l 116 (627)
+...+.++.|.+.|.. +|||++.++. ..+++|..|.++|||+++ ||++||+|++|||.++.++++.+++..+
T Consensus 19 ~s~~~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l 98 (120)
T 2iwo_A 19 YFQSMGLRTVEMKKGPTDSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLL 98 (120)
T ss_dssp ------CEEEEEEC----CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHH
T ss_pred CCCCCCcEEEEEEcCCCCCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3345678899998863 8999999874 347999999999999999 8999999999999999999999999999
Q ss_pred hcCCCeeEEEEEeCCcc
Q psy9827 117 LSLQDQIHLIVQNRRDE 133 (627)
Q Consensus 117 ~~~g~~V~L~v~r~~~~ 133 (627)
+..++.|+|+|.|....
T Consensus 99 ~~~~~~v~l~v~r~g~~ 115 (120)
T 2iwo_A 99 KNASGSIEMQVVAGGDV 115 (120)
T ss_dssp HHCCSEEEEEEECCTTS
T ss_pred HcCCCeEEEEEEECCcc
Confidence 98899999999987654
No 34
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.38 E-value=1.7e-12 Score=112.01 Aligned_cols=86 Identities=34% Similarity=0.687 Sum_probs=76.7
Q ss_pred CCceEEEeccCC-ceeEEEEccCC-CCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEE
Q psy9827 49 PDPRFITFQKEG-SVGIRLTGGNK-VGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHL 125 (627)
Q Consensus 49 ~~~r~v~l~k~g-~lG~~i~g~~~-~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L 125 (627)
+.++.+.+.+.+ +|||++.++.+ .|++|..|.++|||+++| |++||+|++|||.++.++++.++...++..++.+.|
T Consensus 10 ~~~~~v~l~k~~~glG~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l 89 (104)
T 3i4w_A 10 REPRRIVIHRGSTGLGFNIVGGEXGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTI 89 (104)
T ss_dssp SSCEEEEEECBTTBTSEEEEECC-CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSEEEE
T ss_pred CccEEEEEEeCCCccCEEEECCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 578889998864 89999998754 489999999999999999 999999999999999999999999999989999999
Q ss_pred EEEeCCccc
Q psy9827 126 IVQNRRDEY 134 (627)
Q Consensus 126 ~v~r~~~~~ 134 (627)
++.|+++.+
T Consensus 90 ~v~r~~~~~ 98 (104)
T 3i4w_A 90 IAQYKPEEY 98 (104)
T ss_dssp EEEECHHHH
T ss_pred EEEECcchh
Confidence 999876543
No 35
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.38 E-value=2.8e-12 Score=115.81 Aligned_cols=92 Identities=18% Similarity=0.230 Sum_probs=77.5
Q ss_pred CCCccccccCCCCceEEEeccC--CceeEEEEccCCC--------------CEEEEEeCCCChhhhcCCCCCCEEEEECC
Q psy9827 38 SPDLFSIFFVEPDPRFITFQKE--GSVGIRLTGGNKV--------------GIFVTAVQPGSPASLQGLQPGDKILKVND 101 (627)
Q Consensus 38 ~~d~~~~~~~~~~~r~v~l~k~--g~lG~~i~g~~~~--------------gi~V~~V~~gspA~~aGL~~GD~Il~VnG 101 (627)
..++|+.+. ...+.+.+.|. ++|||+|.++... |++|..|.+||||+++||++||+|++|||
T Consensus 17 ~~~~~s~~~--~~~r~v~l~r~~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aGL~~GD~Il~Vng 94 (132)
T 3l4f_D 17 PRGSGSDYI--IKEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNG 94 (132)
T ss_dssp --CCSCCCC--CCCCEEEEECCTTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGTCCTTCEEEEESS
T ss_pred cCCCCCCcC--CCCEEEEEEECCCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECC
Confidence 345566554 35667777764 5899999998542 79999999999999999999999999999
Q ss_pred EeCCCCCHHHHHHHHhcCCCeeEEEEEeCC
Q psy9827 102 MDMKGITREEAVLFLLSLQDQIHLIVQNRR 131 (627)
Q Consensus 102 ~~v~~~~~~~~~~~l~~~g~~V~L~v~r~~ 131 (627)
.++.++++.+++..++..+..+.|+|.+..
T Consensus 95 ~~v~~~~~~~~~~~l~~~g~~v~l~v~~~~ 124 (132)
T 3l4f_D 95 QNVVKVGHRQVVNMIRQGGNTLMVKVVMVT 124 (132)
T ss_dssp SBCTTSCHHHHHHHHHHTTTEEEEEEECCC
T ss_pred EECCCCCHHHHHHHHHcCCCEEEEEEEECC
Confidence 999999999999999989999999998754
No 36
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.37 E-value=2.6e-12 Score=112.44 Aligned_cols=89 Identities=25% Similarity=0.478 Sum_probs=78.3
Q ss_pred ccCCCCceEEEeccCC-ceeEEEEccCCCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCe
Q psy9827 45 FFVEPDPRFITFQKEG-SVGIRLTGGNKVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQDQ 122 (627)
Q Consensus 45 ~~~~~~~r~v~l~k~g-~lG~~i~g~~~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~ 122 (627)
.+....++.+.+.+.+ +|||++.++.+.|++|..|.++|||+++| |++||+|++|||.++.++++.++...++..++.
T Consensus 10 ~~~~~~~~~v~l~~~~~~lG~~l~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~ 89 (111)
T 2dlu_A 10 TVCWGHVEEVELINDGSGLGFGIVGGKTSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCGNS 89 (111)
T ss_dssp CCSCSEEEEEEEECCSSCCCEEEECCSSSSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHHCSE
T ss_pred CcCcCceEEEEEEeCCCccCEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 3445567888888864 89999998877899999999999999999 999999999999999999999998888877899
Q ss_pred eEEEEEeCCcc
Q psy9827 123 IHLIVQNRRDE 133 (627)
Q Consensus 123 V~L~v~r~~~~ 133 (627)
|.|+|.|+...
T Consensus 90 v~l~v~R~~~~ 100 (111)
T 2dlu_A 90 VRMLVARDPAG 100 (111)
T ss_dssp EEEEEEESCTT
T ss_pred EEEEEEeCCCC
Confidence 99999986643
No 37
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.37 E-value=1.7e-12 Score=114.81 Aligned_cols=86 Identities=31% Similarity=0.539 Sum_probs=75.8
Q ss_pred CCCCceEEEeccC-CceeEEEEccC-----CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcC
Q psy9827 47 VEPDPRFITFQKE-GSVGIRLTGGN-----KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSL 119 (627)
Q Consensus 47 ~~~~~r~v~l~k~-g~lG~~i~g~~-----~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~ 119 (627)
..|.++.|.|.|. .+|||++.++. +.|++|..|.++|||+++| |++||+|++|||.++.++++.++...++..
T Consensus 22 ~~~~~~~v~L~k~~~glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 101 (117)
T 2fne_A 22 SMPQCKSITLERGPDGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRT 101 (117)
T ss_dssp -CCEEEEEEECCBTTBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC
T ss_pred CCCccEEEEEEeCCCcccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 3567788999886 48999999863 3589999999999999999 999999999999999999999999999888
Q ss_pred CCeeEEEEEeCCc
Q psy9827 120 QDQIHLIVQNRRD 132 (627)
Q Consensus 120 g~~V~L~v~r~~~ 132 (627)
+..|.|+|.|.+.
T Consensus 102 ~~~v~l~v~R~g~ 114 (117)
T 2fne_A 102 KGTVTLMVLSSDE 114 (117)
T ss_dssp CSSEEEEEEECSC
T ss_pred CCeEEEEEEeCCc
Confidence 8889999998653
No 38
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.37 E-value=5.8e-12 Score=105.93 Aligned_cols=81 Identities=30% Similarity=0.551 Sum_probs=70.9
Q ss_pred CceEEEeccC-CceeEEEEccC-CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEE
Q psy9827 50 DPRFITFQKE-GSVGIRLTGGN-KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIV 127 (627)
Q Consensus 50 ~~r~v~l~k~-g~lG~~i~g~~-~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v 127 (627)
.+|.+.+.+. ++|||++.++. ..|++|..|.++|||+++||++||+|++|||.++.++++.++...++..+..+.+.+
T Consensus 3 ~~r~v~l~r~~~g~G~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~~ 82 (91)
T 1g9o_A 3 LPRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLV 82 (91)
T ss_dssp CCEEEEEECBTTBCCEEEEECTTCSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEE
T ss_pred ccEEEEEEeCCCcccEEEEecCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEE
Confidence 5788999886 48999998875 369999999999999999999999999999999999999999999987767766666
Q ss_pred EeC
Q psy9827 128 QNR 130 (627)
Q Consensus 128 ~r~ 130 (627)
.++
T Consensus 83 ~~r 85 (91)
T 1g9o_A 83 VDP 85 (91)
T ss_dssp ECC
T ss_pred EcC
Confidence 543
No 39
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=99.36 E-value=2e-12 Score=115.49 Aligned_cols=93 Identities=46% Similarity=0.859 Sum_probs=79.2
Q ss_pred cCCCCceEEEeccCCceeEEEEccCCCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHh--cCCCee
Q psy9827 46 FVEPDPRFITFQKEGSVGIRLTGGNKVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLL--SLQDQI 123 (627)
Q Consensus 46 ~~~~~~r~v~l~k~g~lG~~i~g~~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~--~~g~~V 123 (627)
...|..+.+.+.+.++|||++.++.+.|++|..|.++|||+++||++||+|++|||.++.++++.++...+. ..+..+
T Consensus 25 ~~~p~~~~~~~~~~~~lG~~l~~~~~~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v 104 (124)
T 3tsv_A 25 ILRPSMKLVKFRKGDSVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEV 104 (124)
T ss_dssp ---CCCEEEEEECSSCCCEEEEECTTSCEEEEEECTTCHHHHTTCCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEE
T ss_pred ccCCCeEEEEcCCCCceeEEEecCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEE
Confidence 345677777777778999999987778999999999999999999999999999999999999888888766 578999
Q ss_pred EEEEEeCCcccceee
Q psy9827 124 HLIVQNRRDEYEHVV 138 (627)
Q Consensus 124 ~L~v~r~~~~~~~~v 138 (627)
.|+|.|+++.+...+
T Consensus 105 ~l~v~R~~~~~~~~~ 119 (124)
T 3tsv_A 105 TILAQKKKDVYRRIV 119 (124)
T ss_dssp EEEEEECHHHHHHHT
T ss_pred EEEEEECCchhhhhH
Confidence 999999877665443
No 40
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.36 E-value=5.9e-12 Score=108.79 Aligned_cols=90 Identities=33% Similarity=0.525 Sum_probs=77.7
Q ss_pred cccccCCCCceEEEeccC--CceeEEEEccCC--CCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHh
Q psy9827 42 FSIFFVEPDPRFITFQKE--GSVGIRLTGGNK--VGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLL 117 (627)
Q Consensus 42 ~~~~~~~~~~r~v~l~k~--g~lG~~i~g~~~--~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~ 117 (627)
+...+....++.+.+.+. ++|||++.++.+ .|++|..|.++|||+++||++||+|++|||.++.++++.++...++
T Consensus 7 ~~~~~~~~~~~~v~l~k~~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~ 86 (104)
T 1wi2_A 7 GNNELTQFLPRIVTLKKPPGAQLGFNIRGGKASQLGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEHSKAVEILK 86 (104)
T ss_dssp SCCCCCSSCCEEEEECCCTTCCCSEEEECCSSSCCCCEEEEECTTSHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHH
T ss_pred cccCcCCCCCEEEEEEeCCCCCccEEEEcccCCCCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 333455567899999886 589999998743 5899999999999999999999999999999999999999988888
Q ss_pred cCCCeeEEEEEeCCc
Q psy9827 118 SLQDQIHLIVQNRRD 132 (627)
Q Consensus 118 ~~g~~V~L~v~r~~~ 132 (627)
. +..+.|+|.|.+.
T Consensus 87 ~-~~~v~l~v~r~~~ 100 (104)
T 1wi2_A 87 T-AREISMRVRFFSG 100 (104)
T ss_dssp H-SSSEEEEEECCCC
T ss_pred C-CCEEEEEEEECCC
Confidence 7 7899999998653
No 41
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1
Probab=99.36 E-value=3e-12 Score=123.95 Aligned_cols=145 Identities=14% Similarity=0.162 Sum_probs=107.1
Q ss_pred CceEEEeCcc---HHHHHHHHhhhCCCCcccCC--------C-------CCCCCHHHHHHHHhcccc-----cCCcee--
Q psy9827 454 IRPVVLFGPV---ADLARDKLLKDFPDKFSAPR--------K-------FNFILWATIKDTAMYQSS-----KEPGMY-- 508 (627)
Q Consensus 454 ~RpvVl~Gp~---k~~l~~~Ll~~~p~~f~~~~--------~-------~~Fvs~e~f~~~i~~~~~-----~~~~~Y-- 508 (627)
.++++|+||+ |+||.+.|+..+|..|..++ . .+|++.+.|..++..+.+ +.+|+|
T Consensus 4 g~~i~lvGpsGaGKSTLl~~L~~~~~~~~~~~v~~ttr~~~~g~~~g~~~~~~~~~~~~~~i~~~~~l~~~~~~~n~~g~ 83 (198)
T 1lvg_A 4 PRPVVLSGPSGAGKSTLLKKLFQEHSSIFGFSVSHTTRNPRPGEEDGKDYYFVTREMMQRDIAAGDFIEHAEFSGNLYGT 83 (198)
T ss_dssp -CCEEEECCTTSSHHHHHHHHHHHHTTTEEECCCEECSCCCTTCCBTTTBEECCHHHHHHHHHHTCEEEEEEETTEEEEE
T ss_pred CCEEEEECCCCCCHHHHHHHHHhhCchhceeeeeeeccCCCCcccCCceEEEccHHHHHHHHHcCCCEeeeeecCccCCC
Confidence 5799999999 99999999987775555422 1 158899999998754432 258888
Q ss_pred ---hHHhHHhCCCcEEEecC-Cce-eccccCCCCceeEEEEcCCCcccC-------CCCCHHHHHHHHHHHHHHHHHhc-
Q psy9827 509 ---QGKDSMYQGKDSMYQGK-ESM-YQGKDSMYQGKDSMYQGKDSMYQG-------KDIKKEVKIKLFEQSQKLEKVWS- 575 (627)
Q Consensus 509 ---~V~~v~~~gk~ciLdi~-~~l-~~~~~~~~P~~~vIFI~ppsl~~~-------~~~~e~~~~~~~~~~~~~e~~~~- 575 (627)
.|+++++.|+.|++|++ ..+ ..+...+.|. ++|+.||++..+ ...+++++++.+.++.+ +..+.
T Consensus 84 ~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~l~~p~~~ilde~~~~~d~~~e~~i~~~l~~~~~-~~~~a~ 160 (198)
T 1lvg_A 84 SKEAVRAVQAMNRICVLDVDLQGVRSIKKTDLCPI--YIFVQPPSLDVLEQRLRLRNTETEESLAKRLAAART-DMESSK 160 (198)
T ss_dssp EHHHHHHHHHTTCEEEEECCHHHHHHHTTSSCCCE--EEEEECSCHHHHHHHHHHHTCSCHHHHHHHHHHHHH-HTTGGG
T ss_pred CHHHHHHHHHcCCcEEEECCHHHHHHHHhcCCCcE--EEEEeCCCHHHHHHHHHhcCCCCHHHHHHHHHHHHH-HHHHhh
Confidence 78899999999999998 433 2222255677 899999994332 33456656666655543 33444
Q ss_pred --CcccEEEECCCHHHHHHHHHHHHHhh
Q psy9827 576 --HVFTGTITLSGVDVWYRKTRELIEKQ 601 (627)
Q Consensus 576 --~~fd~vi~n~~l~~~~~~l~~~i~~~ 601 (627)
+.||+||+|+++++++++|.++|...
T Consensus 161 ~~~~~D~iivnd~le~a~~~l~~ii~~~ 188 (198)
T 1lvg_A 161 EPGLFDLVIINDDLDKAYATLKQALSEE 188 (198)
T ss_dssp STTTCSEEEECSSHHHHHHHHHHHTHHH
T ss_pred ccCCceEEEECCCHHHHHHHHHHHHHHH
Confidence 78999999999999999999999764
No 42
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.36 E-value=4.1e-12 Score=106.89 Aligned_cols=83 Identities=30% Similarity=0.426 Sum_probs=72.9
Q ss_pred ceEEEeccCCceeEEEEccCC--CCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEE
Q psy9827 51 PRFITFQKEGSVGIRLTGGNK--VGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQ 128 (627)
Q Consensus 51 ~r~v~l~k~g~lG~~i~g~~~--~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~ 128 (627)
++.+.+...++|||++.++.+ .|++|..|.++|||+++||++||+|++|||.++.++++.++...++..+..+.|+|.
T Consensus 4 ~~~v~~~~~~~~G~~l~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~ 83 (91)
T 2pkt_A 4 TQQIDLQGPGPWGFRLVGGKDFEQPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLTLTVA 83 (91)
T ss_dssp EEEEEEESSSCCSEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEE
T ss_pred cEEEEECCCCCCCEEEEccCCCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEE
Confidence 355666667799999998744 589999999999999999999999999999999999999988888888999999999
Q ss_pred eCCcc
Q psy9827 129 NRRDE 133 (627)
Q Consensus 129 r~~~~ 133 (627)
|++..
T Consensus 84 R~g~~ 88 (91)
T 2pkt_A 84 RSEHE 88 (91)
T ss_dssp EECCC
T ss_pred ECCcc
Confidence 86643
No 43
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.35 E-value=5.3e-12 Score=110.09 Aligned_cols=88 Identities=26% Similarity=0.459 Sum_probs=76.7
Q ss_pred cccCCCCceEEEeccCCceeEEEEccCC----CCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhc
Q psy9827 44 IFFVEPDPRFITFQKEGSVGIRLTGGNK----VGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLS 118 (627)
Q Consensus 44 ~~~~~~~~r~v~l~k~g~lG~~i~g~~~----~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~ 118 (627)
.+...+..+.+.+.+..+|||++.++.+ .+++|..|.++|||+++| |++||+|++|||.++.++++.+++.+++.
T Consensus 9 ~~~~~~~~~~v~l~k~~glG~~i~gg~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~ 88 (109)
T 1wi4_A 9 PLDRDPAFRVITVTKETGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITR 88 (109)
T ss_dssp SCCCCTTEEEEEECCSSCCCEEEEECSSSSSCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHH
T ss_pred CCCCCCcEEEEEEeCCCccCEEEEeccCCCCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 3445678899999998899999998643 379999999999999999 99999999999999999999999999884
Q ss_pred C----CCeeEEEEEeCC
Q psy9827 119 L----QDQIHLIVQNRR 131 (627)
Q Consensus 119 ~----g~~V~L~v~r~~ 131 (627)
. +..++|.+.|..
T Consensus 89 ~~~r~~~~~~l~v~R~~ 105 (109)
T 1wi4_A 89 AKLRSESPWEIAFIRSG 105 (109)
T ss_dssp SCCSSSSCEEEEEECCC
T ss_pred cccCCCceEEEEEEeCC
Confidence 3 578889888754
No 44
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.35 E-value=8.4e-12 Score=106.06 Aligned_cols=83 Identities=34% Similarity=0.559 Sum_probs=73.5
Q ss_pred CCceEEEeccC-CceeEEEEccCC-----CCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCCC
Q psy9827 49 PDPRFITFQKE-GSVGIRLTGGNK-----VGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQD 121 (627)
Q Consensus 49 ~~~r~v~l~k~-g~lG~~i~g~~~-----~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~ 121 (627)
.+.+.+.+.+. .+|||++.++.+ .|++|..|.++|||+++| |++||+|++|||.++.++++.++...++..+.
T Consensus 4 g~~~~v~l~k~~~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~ 83 (96)
T 1d5g_A 4 GDIFEVELAKNDNSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQ 83 (96)
T ss_dssp TCEEEEEEECSSSSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHSCCS
T ss_pred CCEEEEEEEeCCCCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 35677788776 489999998643 589999999999999999 99999999999999999999999988888889
Q ss_pred eeEEEEEeCC
Q psy9827 122 QIHLIVQNRR 131 (627)
Q Consensus 122 ~V~L~v~r~~ 131 (627)
.+.|+|.|++
T Consensus 84 ~v~l~v~R~~ 93 (96)
T 1d5g_A 84 VVHLLLEKGQ 93 (96)
T ss_dssp EEEEEEECCS
T ss_pred eEEEEEEcCC
Confidence 9999998755
No 45
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.35 E-value=5.5e-12 Score=107.25 Aligned_cols=85 Identities=27% Similarity=0.474 Sum_probs=75.0
Q ss_pred CCceEEEeccC-CceeEEEEccC----CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCee
Q psy9827 49 PDPRFITFQKE-GSVGIRLTGGN----KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQI 123 (627)
Q Consensus 49 ~~~r~v~l~k~-g~lG~~i~g~~----~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V 123 (627)
+.+|.+.+.+. .+|||++.+.. ..|++|..|.++|||+++||++||+|++|||.++.++++.++...++..+..+
T Consensus 2 ~~~r~v~l~k~~~~~G~~l~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v 81 (96)
T 2v90_A 2 MKPRCLHLEKGPQGFGFLLREEKGLDGRPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQGQGSCV 81 (96)
T ss_dssp CCCEEEEEECBTTBSCEEEEEEECTTSCEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEE
T ss_pred CCCEEEEEEeCCCcccEEEEeccCCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEE
Confidence 46899999886 48999998742 24799999999999999999999999999999999999999998888779999
Q ss_pred EEEEEeCCcc
Q psy9827 124 HLIVQNRRDE 133 (627)
Q Consensus 124 ~L~v~r~~~~ 133 (627)
.|+|.|+...
T Consensus 82 ~l~v~r~~~~ 91 (96)
T 2v90_A 82 SLTVVDPEAD 91 (96)
T ss_dssp EEEEECCCTT
T ss_pred EEEEECCCCc
Confidence 9999986543
No 46
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.35 E-value=8.2e-12 Score=106.55 Aligned_cols=85 Identities=27% Similarity=0.449 Sum_probs=74.7
Q ss_pred CceEEEeccC-CceeEEEEccCC---CCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeE
Q psy9827 50 DPRFITFQKE-GSVGIRLTGGNK---VGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIH 124 (627)
Q Consensus 50 ~~r~v~l~k~-g~lG~~i~g~~~---~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~ 124 (627)
..+.+.+.+. ++|||++.++.+ .|++|..|.++|||+++| |++||+|++|||.++.++++.++...++..++.+.
T Consensus 4 ~~~~v~l~~~~~~lG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~ 83 (98)
T 2opg_A 4 CETTIEISKGRTGLGLSIVGGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTPQRVR 83 (98)
T ss_dssp EEEEEEEECBTTBTCEEEEECTTSTTCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEE
T ss_pred CEEEEEEEECCCcccEEEecCCCCCCCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 4567778776 589999998754 589999999999999999 99999999999999999999999988888889999
Q ss_pred EEEEeCCccc
Q psy9827 125 LIVQNRRDEY 134 (627)
Q Consensus 125 L~v~r~~~~~ 134 (627)
|+|.|+...+
T Consensus 84 l~v~R~~~~~ 93 (98)
T 2opg_A 84 LTLYRDEAPY 93 (98)
T ss_dssp EEEEECSSCC
T ss_pred EEEEcCCCCC
Confidence 9999876543
No 47
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.34 E-value=5.5e-12 Score=109.32 Aligned_cols=86 Identities=27% Similarity=0.531 Sum_probs=73.4
Q ss_pred CCCceEEEeccCCceeEEEEcc-----CCCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCCC
Q psy9827 48 EPDPRFITFQKEGSVGIRLTGG-----NKVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQD 121 (627)
Q Consensus 48 ~~~~r~v~l~k~g~lG~~i~g~-----~~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~ 121 (627)
.+....+.+...++|||++.++ ...|++|..|.++|||+++| |++||+|++|||.++.++++.++...++..++
T Consensus 9 ~~~~~~v~l~~~~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~ 88 (106)
T 3axa_A 9 EPEIITVTLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSS 88 (106)
T ss_dssp -CCEEEEEEECSSSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCS
T ss_pred CceEEEEEECCCCccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 3455556673346899999874 34589999999999999999 99999999999999999999999999988999
Q ss_pred eeEEEEEeCCcc
Q psy9827 122 QIHLIVQNRRDE 133 (627)
Q Consensus 122 ~V~L~v~r~~~~ 133 (627)
.+.|+|.|+...
T Consensus 89 ~v~l~v~R~~~~ 100 (106)
T 3axa_A 89 VVTLEVAKQGAI 100 (106)
T ss_dssp EEEEEEECCCSS
T ss_pred eEEEEEEeCCcc
Confidence 999999987654
No 48
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.34 E-value=5.7e-12 Score=109.45 Aligned_cols=84 Identities=30% Similarity=0.519 Sum_probs=74.9
Q ss_pred CCceEEEeccC-CceeEEEEccC----------CCCEEEEEeCCCChhhhc-CCCCCCEEEEECCEeCCCCCHHHHHHHH
Q psy9827 49 PDPRFITFQKE-GSVGIRLTGGN----------KVGIFVTAVQPGSPASLQ-GLQPGDKILKVNDMDMKGITREEAVLFL 116 (627)
Q Consensus 49 ~~~r~v~l~k~-g~lG~~i~g~~----------~~gi~V~~V~~gspA~~a-GL~~GD~Il~VnG~~v~~~~~~~~~~~l 116 (627)
..++.+.+.|. ++|||++.++. ..|++|..|.++|||+++ ||++||+|++|||.++.++++.+++..+
T Consensus 7 ~~~~~v~l~k~~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~~~ 86 (107)
T 1uhp_A 7 GKSLTLVLHRDSGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEAF 86 (107)
T ss_dssp SEEEEEEECCSSSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHHHH
T ss_pred cEEEEEEEEeCCCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 46677888886 58999999864 458999999999999999 8999999999999999999999999999
Q ss_pred hcCCCeeEEEEEeCCc
Q psy9827 117 LSLQDQIHLIVQNRRD 132 (627)
Q Consensus 117 ~~~g~~V~L~v~r~~~ 132 (627)
+..++.+.|+|.|+.+
T Consensus 87 ~~~~~~v~l~v~R~~~ 102 (107)
T 1uhp_A 87 KTAKEPIVVQVLRRTS 102 (107)
T ss_dssp HHCCSSEEEEEEECCS
T ss_pred HcCCCcEEEEEEeCCC
Confidence 9888999999988653
No 49
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.34 E-value=6.3e-12 Score=105.53 Aligned_cols=82 Identities=33% Similarity=0.463 Sum_probs=73.5
Q ss_pred CCceEEEeccC--CceeEEEEccC--CCCEEEEEeCCCChhhhc-CCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCee
Q psy9827 49 PDPRFITFQKE--GSVGIRLTGGN--KVGIFVTAVQPGSPASLQ-GLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQI 123 (627)
Q Consensus 49 ~~~r~v~l~k~--g~lG~~i~g~~--~~gi~V~~V~~gspA~~a-GL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V 123 (627)
+.++.+.+.+. ++|||++.++. ..+++|..|.++|||+++ ||++||+|++|||.++.++++.++...++..+..+
T Consensus 3 ~~~~~v~l~k~~~~~lG~~i~~~~~~~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~v 82 (90)
T 1qav_A 3 LQRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEV 82 (90)
T ss_dssp SSCEEEEEECCTTTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTCCSEE
T ss_pred CccEEEEEEeCCCCCcCEEEEcccCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 46788988885 48999999863 358999999999999999 89999999999999999999999999999889999
Q ss_pred EEEEEeC
Q psy9827 124 HLIVQNR 130 (627)
Q Consensus 124 ~L~v~r~ 130 (627)
.|+|.|.
T Consensus 83 ~l~v~r~ 89 (90)
T 1qav_A 83 VLEVKYM 89 (90)
T ss_dssp EEEEEEC
T ss_pred EEEEEEe
Confidence 9999874
No 50
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.34 E-value=6.7e-12 Score=108.61 Aligned_cols=84 Identities=33% Similarity=0.440 Sum_probs=73.7
Q ss_pred CceEEEeccC-CceeEEEEccCC-------CCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCC
Q psy9827 50 DPRFITFQKE-GSVGIRLTGGNK-------VGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQ 120 (627)
Q Consensus 50 ~~r~v~l~k~-g~lG~~i~g~~~-------~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g 120 (627)
..+.|.+.+. ++|||++.++.+ .|++|..|.++|||+++| |++||+|++|||.++.+.++.++...++..+
T Consensus 3 ~~~~v~l~k~~~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 82 (105)
T 2awx_A 3 KIMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKNTS 82 (105)
T ss_dssp CEEEEEEECBTTBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHSCC
T ss_pred eEEEEEEEECCCCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 4566778775 589999998743 489999999999999999 9999999999999999999999999999889
Q ss_pred CeeEEEEEeCCcc
Q psy9827 121 DQIHLIVQNRRDE 133 (627)
Q Consensus 121 ~~V~L~v~r~~~~ 133 (627)
..|.|+|.|....
T Consensus 83 ~~v~l~v~R~~~~ 95 (105)
T 2awx_A 83 DFVYLKVAKPTSM 95 (105)
T ss_dssp SEEEEEEECCCC-
T ss_pred CeEEEEEEcCCCC
Confidence 9999999986644
No 51
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.34 E-value=7.5e-12 Score=105.88 Aligned_cols=82 Identities=29% Similarity=0.457 Sum_probs=71.6
Q ss_pred CceEEEeccC-CceeEEEEccC-------CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCC
Q psy9827 50 DPRFITFQKE-GSVGIRLTGGN-------KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQ 120 (627)
Q Consensus 50 ~~r~v~l~k~-g~lG~~i~g~~-------~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g 120 (627)
+.+.|.|.+. .+|||++.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++...++..+
T Consensus 3 ~~~~v~l~k~~~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 82 (94)
T 2fe5_A 3 TIMEVNLLKGPKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTS 82 (94)
T ss_dssp CEEEEEEECCTTCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHTCC
T ss_pred EEEEEEEEECCCCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 3567788776 48999999863 2489999999999999999 9999999999999999999999998888888
Q ss_pred CeeEEEEEeCC
Q psy9827 121 DQIHLIVQNRR 131 (627)
Q Consensus 121 ~~V~L~v~r~~ 131 (627)
..|.|+|.|+.
T Consensus 83 ~~v~l~v~R~g 93 (94)
T 2fe5_A 83 DMVYLKVAKPG 93 (94)
T ss_dssp SEEEEEEECCC
T ss_pred CeEEEEEEcCC
Confidence 89999998753
No 52
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.34 E-value=8e-12 Score=104.81 Aligned_cols=82 Identities=15% Similarity=0.205 Sum_probs=72.0
Q ss_pred CceEEEeccC-CceeEEEEccCCCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhc--CCCeeEE
Q psy9827 50 DPRFITFQKE-GSVGIRLTGGNKVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLS--LQDQIHL 125 (627)
Q Consensus 50 ~~r~v~l~k~-g~lG~~i~g~~~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~--~g~~V~L 125 (627)
+++.|.+.|. .+|||+|.++....+||++|.+||+|++.| |++||.|++|||+++.+++|.+++.+|+. .+.+++|
T Consensus 5 ~~k~V~l~K~~~~LG~tI~~~g~g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~~~L 84 (95)
T 3gge_A 5 IEKEVNVYKSEDSLGLTITDNGVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKEELFTM 84 (95)
T ss_dssp EEEEEEEECCSSCCCEEEECSSSSCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEEEE
T ss_pred eEEEEEEEECCCCceEEEEcCCCCcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCEEEE
Confidence 4577888886 589999997656679999999999999999 99999999999999999999999999996 4668888
Q ss_pred EEEeCC
Q psy9827 126 IVQNRR 131 (627)
Q Consensus 126 ~v~r~~ 131 (627)
.+.+..
T Consensus 85 ~lv~p~ 90 (95)
T 3gge_A 85 KLIEPK 90 (95)
T ss_dssp EEEEEC
T ss_pred EEECcc
Confidence 887644
No 53
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.34 E-value=5.9e-12 Score=108.10 Aligned_cols=84 Identities=32% Similarity=0.549 Sum_probs=74.3
Q ss_pred CCceEEEeccC-CceeEEEEccC-------CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcC
Q psy9827 49 PDPRFITFQKE-GSVGIRLTGGN-------KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSL 119 (627)
Q Consensus 49 ~~~r~v~l~k~-g~lG~~i~g~~-------~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~ 119 (627)
+.++.+.+.+. ++|||++.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++...++..
T Consensus 6 ~~~~~v~l~~~~~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 85 (101)
T 2jik_A 6 VTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNA 85 (101)
T ss_dssp EEEEEEEEECCTTCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHTC
T ss_pred CccEEEEEEeCCCCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 35677888876 58999999863 3589999999999999999 999999999999999999999999888888
Q ss_pred CCeeEEEEEeCCc
Q psy9827 120 QDQIHLIVQNRRD 132 (627)
Q Consensus 120 g~~V~L~v~r~~~ 132 (627)
++.+.|+|.|++.
T Consensus 86 g~~v~l~v~R~~~ 98 (101)
T 2jik_A 86 GYAVSLRVQHRLE 98 (101)
T ss_dssp CSEEEEEEEEESC
T ss_pred CCeEEEEEEeCCC
Confidence 8999999988653
No 54
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.33 E-value=6.3e-12 Score=108.15 Aligned_cols=83 Identities=29% Similarity=0.532 Sum_probs=73.4
Q ss_pred ceEEEeccC-CceeEEEEccC-------CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCCC
Q psy9827 51 PRFITFQKE-GSVGIRLTGGN-------KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQD 121 (627)
Q Consensus 51 ~r~v~l~k~-g~lG~~i~g~~-------~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~ 121 (627)
.+.+.+.+. ++|||++.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++...++..+.
T Consensus 5 ~~~v~l~k~~~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~ 84 (102)
T 2i1n_A 5 YEEIVLERGNSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKEAGP 84 (102)
T ss_dssp EEEEEEECBTTBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSCS
T ss_pred EEEEEEEECCCcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 456777775 48999999864 3589999999999999999 99999999999999999999999988888899
Q ss_pred eeEEEEEeCCcc
Q psy9827 122 QIHLIVQNRRDE 133 (627)
Q Consensus 122 ~V~L~v~r~~~~ 133 (627)
.+.|+|.|++..
T Consensus 85 ~v~l~v~R~~~~ 96 (102)
T 2i1n_A 85 VVRLVVRRRQPP 96 (102)
T ss_dssp EEEEEEEEECCC
T ss_pred eEEEEEEeCCCC
Confidence 999999986643
No 55
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.33 E-value=8e-12 Score=104.37 Aligned_cols=81 Identities=19% Similarity=0.378 Sum_probs=70.4
Q ss_pred ceEEEeccCCceeEEEEccCC--CCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEE
Q psy9827 51 PRFITFQKEGSVGIRLTGGNK--VGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQ 128 (627)
Q Consensus 51 ~r~v~l~k~g~lG~~i~g~~~--~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~ 128 (627)
+..+.+...++|||++.++.+ .+++|..|.++|||+++||++||+|++|||.++.++++.++...++..+..+.|+|.
T Consensus 4 ~~~v~l~~~~~~G~~l~~g~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~ 83 (88)
T 2uzc_A 4 NYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQGMTHLEAQNKIKGCTGSLNMTLQ 83 (88)
T ss_dssp EEEEEEESSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEE
T ss_pred EEEEEEcCCCcccEEEECcCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEE
Confidence 345666555689999998643 479999999999999999999999999999999999988888888877999999998
Q ss_pred eCC
Q psy9827 129 NRR 131 (627)
Q Consensus 129 r~~ 131 (627)
|++
T Consensus 84 R~g 86 (88)
T 2uzc_A 84 RES 86 (88)
T ss_dssp CCC
T ss_pred eCC
Confidence 754
No 56
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.33 E-value=4.5e-12 Score=105.14 Aligned_cols=80 Identities=25% Similarity=0.425 Sum_probs=70.1
Q ss_pred eEEEeccCCceeEEEEccC--CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEe
Q psy9827 52 RFITFQKEGSVGIRLTGGN--KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQN 129 (627)
Q Consensus 52 r~v~l~k~g~lG~~i~g~~--~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r 129 (627)
..|.+...++|||++.++. ..+++|..|.++|||+++||++||+|++|||.++.++++.++...++..+..+.|+|.|
T Consensus 3 ~~v~l~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R 82 (85)
T 1rgw_A 3 YSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQK 82 (85)
T ss_dssp EEEEECCSSCCCEEECCCGGGTSCCBEEEECTTSHHHHSSCCCCSBEEEETTEECTTCCHHHHHHHHTTCSSCEEEEEES
T ss_pred EEEEEeCCCccCEEEEeccCCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHcCCCeEEEEEEe
Confidence 4566766679999999874 34799999999999999999999999999999999999999998888778889999987
Q ss_pred CC
Q psy9827 130 RR 131 (627)
Q Consensus 130 ~~ 131 (627)
++
T Consensus 83 ~~ 84 (85)
T 1rgw_A 83 SK 84 (85)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 57
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.33 E-value=6.5e-12 Score=106.48 Aligned_cols=83 Identities=27% Similarity=0.505 Sum_probs=73.2
Q ss_pred CCceEEEeccC-CceeEEEEccCC-CCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEE
Q psy9827 49 PDPRFITFQKE-GSVGIRLTGGNK-VGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLI 126 (627)
Q Consensus 49 ~~~r~v~l~k~-g~lG~~i~g~~~-~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~ 126 (627)
..+|.+.+.+. ++|||++.++.. .+++|..|.++|||+++||++||+|++|||.++.++++.++...++..+..+.++
T Consensus 4 ~~~r~v~l~~~~~~~G~~l~~~~~~~~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~ 83 (95)
T 3r68_A 4 HQPRVVVIKKGSNGYGFYLRAGPEQKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTLL 83 (95)
T ss_dssp CCCEEEEEECBTTBCSCEEEEC--CCSEEEECCCTTSHHHHHTCCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEEEEE
T ss_pred CCcEEEEEecCCCcccEEEEecCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEE
Confidence 57889999886 489999987643 4899999999999999999999999999999999999999999999888889888
Q ss_pred EEeCC
Q psy9827 127 VQNRR 131 (627)
Q Consensus 127 v~r~~ 131 (627)
+.|+.
T Consensus 84 ~~r~~ 88 (95)
T 3r68_A 84 VLDKE 88 (95)
T ss_dssp EEECC
T ss_pred EECCc
Confidence 87654
No 58
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.32 E-value=5.6e-12 Score=105.59 Aligned_cols=79 Identities=22% Similarity=0.366 Sum_probs=69.4
Q ss_pred EEEeccCCceeEEEEccC--CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEeC
Q psy9827 53 FITFQKEGSVGIRLTGGN--KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQNR 130 (627)
Q Consensus 53 ~v~l~k~g~lG~~i~g~~--~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r~ 130 (627)
.+.+...++|||++.++. ..+++|..|.++|||+++||++||+|++|||.++.++++.++...++..++.+.|+|.|+
T Consensus 6 ~v~~~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 85 (89)
T 2q3g_A 6 KVVLEGPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGSLTHIEAQNKIRACGERLSLGLSRA 85 (89)
T ss_dssp EEEEESSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHTCTTEEEEEEEEE
T ss_pred EEEEcCCCcccEEEECcCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEEEeC
Confidence 455555678999999864 357999999999999999999999999999999999999999988888889999999875
Q ss_pred C
Q psy9827 131 R 131 (627)
Q Consensus 131 ~ 131 (627)
.
T Consensus 86 ~ 86 (89)
T 2q3g_A 86 I 86 (89)
T ss_dssp C
T ss_pred C
Confidence 5
No 59
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.32 E-value=3.3e-12 Score=115.13 Aligned_cols=93 Identities=24% Similarity=0.396 Sum_probs=76.8
Q ss_pred CccccccCCCCceEEEeccC-CceeEEEEccCC-----CCEEEEEeCCCChhhhc-CCCCCCEEEEECCEeCCCCCHHHH
Q psy9827 40 DLFSIFFVEPDPRFITFQKE-GSVGIRLTGGNK-----VGIFVTAVQPGSPASLQ-GLQPGDKILKVNDMDMKGITREEA 112 (627)
Q Consensus 40 d~~~~~~~~~~~r~v~l~k~-g~lG~~i~g~~~-----~gi~V~~V~~gspA~~a-GL~~GD~Il~VnG~~v~~~~~~~~ 112 (627)
+++......+..+.+.+.+. ++|||+|.++.+ .+++|..|.+||||+++ ||++||+|++|||.++.++++.++
T Consensus 19 ~~~~~~~~~~~~~~v~l~k~~~glG~~i~gg~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~ 98 (130)
T 1i16_A 19 DVSVESTAEATVCTVTLEKMSAGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEA 98 (130)
T ss_dssp SCCSCCSSSEEEEEEEEETTSSSTTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHH
T ss_pred CccccCCCCCcEEEEEEEcCCCccCEEEecCcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 33444444456677788775 589999998754 57999999999999999 799999999999999999999999
Q ss_pred HHHHhcCC-CeeEEEEEeCCc
Q psy9827 113 VLFLLSLQ-DQIHLIVQNRRD 132 (627)
Q Consensus 113 ~~~l~~~g-~~V~L~v~r~~~ 132 (627)
+.+++..+ ..|.|+|.|+..
T Consensus 99 ~~~l~~~~~~~v~l~v~r~~~ 119 (130)
T 1i16_A 99 WNIIKALPDGPVTIVIRRKSL 119 (130)
T ss_dssp HHHHHTSCSSEEEEEEEEESS
T ss_pred HHHHHhCCCceEEEEEEeCCC
Confidence 99999764 569999988643
No 60
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.32 E-value=8.6e-12 Score=110.20 Aligned_cols=84 Identities=23% Similarity=0.438 Sum_probs=73.0
Q ss_pred CceEEEeccC--------CceeEEEEccCC-------CCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHH
Q psy9827 50 DPRFITFQKE--------GSVGIRLTGGNK-------VGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAV 113 (627)
Q Consensus 50 ~~r~v~l~k~--------g~lG~~i~g~~~-------~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~ 113 (627)
..+.+.+.+. ++|||+|.++.+ .|++|..|.++|||+++| |++||+|++|||.++.++++.+++
T Consensus 12 ~~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~ 91 (117)
T 1ujd_A 12 PHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQ 91 (117)
T ss_dssp CEEEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHH
T ss_pred ceEEEEEEecCcccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHH
Confidence 3456666553 479999998753 279999999999999999 999999999999999999999999
Q ss_pred HHHhcCCCeeEEEEEeCCcc
Q psy9827 114 LFLLSLQDQIHLIVQNRRDE 133 (627)
Q Consensus 114 ~~l~~~g~~V~L~v~r~~~~ 133 (627)
.+++..+..|.|+|.|+...
T Consensus 92 ~~l~~~~~~v~l~v~R~~~~ 111 (117)
T 1ujd_A 92 SIISQQSGEAEICVRLDLNM 111 (117)
T ss_dssp HHHSCCSSCEEEEEESSCCC
T ss_pred HHHhcCCCEEEEEEEECCcc
Confidence 99999999999999987654
No 61
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.32 E-value=1.2e-11 Score=105.22 Aligned_cols=81 Identities=32% Similarity=0.580 Sum_probs=70.5
Q ss_pred eEEEeccC-CceeEEEEccC--------CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCe
Q psy9827 52 RFITFQKE-GSVGIRLTGGN--------KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQ 122 (627)
Q Consensus 52 r~v~l~k~-g~lG~~i~g~~--------~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~ 122 (627)
..+.+.+. ++|||++.++. ..|++|..|.++|||+++||++||+|++|||.++.++++.++...++..+..
T Consensus 5 ~~v~~~~~~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~ 84 (97)
T 2w4f_A 5 LTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRGAGTA 84 (97)
T ss_dssp EEEEEECBTTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTSCSE
T ss_pred EEEEEEeCCCceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhCCCCe
Confidence 34555554 69999999752 4689999999999999999999999999999999999999988888888999
Q ss_pred eEEEEEeCCc
Q psy9827 123 IHLIVQNRRD 132 (627)
Q Consensus 123 V~L~v~r~~~ 132 (627)
+.|+|.|++.
T Consensus 85 v~l~v~R~g~ 94 (97)
T 2w4f_A 85 VQMRVWRERE 94 (97)
T ss_dssp EEEEEECCSS
T ss_pred EEEEEEeCCc
Confidence 9999998664
No 62
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.32 E-value=1.1e-11 Score=110.16 Aligned_cols=97 Identities=23% Similarity=0.410 Sum_probs=76.1
Q ss_pred cCCCCCccccccCCCCceEEE--eccC-CceeEEEEccCC-----CCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCC
Q psy9827 35 QPGSPDLFSIFFVEPDPRFIT--FQKE-GSVGIRLTGGNK-----VGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMK 105 (627)
Q Consensus 35 ~~~~~d~~~~~~~~~~~r~v~--l~k~-g~lG~~i~g~~~-----~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~ 105 (627)
.....|+|..|+..+..+.+. +.+. .+|||++.++.. .+++|..|.++|||+++| |++||+|++|||.++.
T Consensus 13 ~~~~~D~~~~y~~~~~~~~~~v~l~~~~~~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~ 92 (121)
T 2kom_A 13 GSENLYFQGSYNTKKIGKRLNIQLKKGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLV 92 (121)
T ss_dssp --------CCCCCCCSCEEEEEEEECCTTCCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECT
T ss_pred cccccCccccccCccCCeEEEEEEEcCCCcEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcC
Confidence 456789999999988776654 4443 489999998752 689999999999999999 9999999999999999
Q ss_pred CCCHHHHHHHHhc--CCCeeEEEEEeCC
Q psy9827 106 GITREEAVLFLLS--LQDQIHLIVQNRR 131 (627)
Q Consensus 106 ~~~~~~~~~~l~~--~g~~V~L~v~r~~ 131 (627)
+++..++...++. .+..|.|+|.|++
T Consensus 93 ~~~~~~~~~~l~~~~~g~~v~l~v~R~g 120 (121)
T 2kom_A 93 GKSQEEVVSLLRSTKMEGTVSLLVFRQE 120 (121)
T ss_dssp TSCHHHHHHHHHHCCSSCEEEEEEEECC
T ss_pred CCCHHHHHHHHhcCCCCCEEEEEEEeCC
Confidence 9998888888875 3789999998754
No 63
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.32 E-value=6.3e-12 Score=111.58 Aligned_cols=92 Identities=30% Similarity=0.441 Sum_probs=78.0
Q ss_pred ccccccCCC--CceEEEeccC-CceeEEEEccC-------CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCH
Q psy9827 41 LFSIFFVEP--DPRFITFQKE-GSVGIRLTGGN-------KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITR 109 (627)
Q Consensus 41 ~~~~~~~~~--~~r~v~l~k~-g~lG~~i~g~~-------~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~ 109 (627)
+...+++.+ .++.|.|.+. ++|||++.++. ..+++|..|.++|||+++| |++||+|++|||.++.++++
T Consensus 6 ~~~~g~~~~~~~~~~v~l~r~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~ 85 (120)
T 2eno_A 6 SGMNGRVDYLVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLH 85 (120)
T ss_dssp CCCSSCCCEEEEEEEEEEECCSSSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCH
T ss_pred cCcCCCCCCCCceEEEEEEECCCCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 334444444 5677888886 58999999863 4589999999999999999 99999999999999999999
Q ss_pred HHHHHHHhcCCCeeEEEEEeCCc
Q psy9827 110 EEAVLFLLSLQDQIHLIVQNRRD 132 (627)
Q Consensus 110 ~~~~~~l~~~g~~V~L~v~r~~~ 132 (627)
.++...++..+..|.|+|.|+..
T Consensus 86 ~~~~~~~~~~g~~v~l~v~R~~~ 108 (120)
T 2eno_A 86 QDAVDLFRNAGYAVSLRVQHRLQ 108 (120)
T ss_dssp HHHHHHHHHHCSEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCeEEEEEEeCCc
Confidence 99998888778999999998654
No 64
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.32 E-value=8.3e-12 Score=104.43 Aligned_cols=81 Identities=22% Similarity=0.312 Sum_probs=71.2
Q ss_pred ceEEEeccC--CceeEEEEccCCCCEEEEEeCCCChhhh-cCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEE
Q psy9827 51 PRFITFQKE--GSVGIRLTGGNKVGIFVTAVQPGSPASL-QGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIV 127 (627)
Q Consensus 51 ~r~v~l~k~--g~lG~~i~g~~~~gi~V~~V~~gspA~~-aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v 127 (627)
.|.|.+.|. ++|||++.+....+++|..|.+||||++ +||++||+|++|||.++.++++.++..+++.....++|++
T Consensus 2 ~r~V~l~K~~~~~lG~~i~~~~~~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~v~l~v 81 (88)
T 1kwa_A 2 SRLVQFQKNTDEPMGITLKMNELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKI 81 (88)
T ss_dssp CEEEEEEECSSSCCCEEEECSCGGGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCCEEEEEEE
T ss_pred eEEEEEEeCCCCceeEEEEeCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEEEEE
Confidence 477888886 4899999986556899999999999999 7899999999999999999999999999986656999998
Q ss_pred EeCC
Q psy9827 128 QNRR 131 (627)
Q Consensus 128 ~r~~ 131 (627)
.|..
T Consensus 82 ~r~~ 85 (88)
T 1kwa_A 82 VPSY 85 (88)
T ss_dssp ECCC
T ss_pred ECCc
Confidence 8744
No 65
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.32 E-value=8.6e-12 Score=105.29 Aligned_cols=83 Identities=29% Similarity=0.548 Sum_probs=73.9
Q ss_pred CCceEEEeccC-CceeEEEEccC--CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeE
Q psy9827 49 PDPRFITFQKE-GSVGIRLTGGN--KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIH 124 (627)
Q Consensus 49 ~~~r~v~l~k~-g~lG~~i~g~~--~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~ 124 (627)
+.+|.|.+.+. .+|||++.++. ..+++|..|.++|||+++| |++||+|++|||.++.++++.++...++..+..+.
T Consensus 4 ~~~r~v~l~k~~~glG~~l~~~~~~~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~ 83 (93)
T 2dkr_A 4 GSSGVVELPKTDEGLGFNIMGGKEQNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQGSVK 83 (93)
T ss_dssp SCSCEEEEECCTTCCCEEEECSSSSSCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCCSEEE
T ss_pred CCCEEEEEEeCCCCccEEEecccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEE
Confidence 56889999886 48999999863 4689999999999999996 99999999999999999999999988887788999
Q ss_pred EEEEeCC
Q psy9827 125 LIVQNRR 131 (627)
Q Consensus 125 L~v~r~~ 131 (627)
|+|.|++
T Consensus 84 l~v~r~~ 90 (93)
T 2dkr_A 84 LVVRSGP 90 (93)
T ss_dssp EEECCCC
T ss_pred EEEEeCC
Confidence 9998765
No 66
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.32 E-value=1.1e-11 Score=104.43 Aligned_cols=83 Identities=30% Similarity=0.464 Sum_probs=73.1
Q ss_pred CCceEEEeccC--CceeEEEEccC-CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeE
Q psy9827 49 PDPRFITFQKE--GSVGIRLTGGN-KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIH 124 (627)
Q Consensus 49 ~~~r~v~l~k~--g~lG~~i~g~~-~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~ 124 (627)
.+...+.+.+. ++|||++.++. ..|++|..|.++|||+++| |++||+|++|||.++.+.++.++...++..++.+.
T Consensus 3 ~~~~~v~l~k~~~~~lG~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~ 82 (92)
T 2qg1_A 3 SDTLTIGLQKKPGKGLGLSIVGKRNDTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSLGTVT 82 (92)
T ss_dssp -CEEEEEEECCTTSCCSEEEECCSSSCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEE
T ss_pred ceEEEEEEEeCCCCcccEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 45677888774 58999999864 4689999999999999999 99999999999999999999999888888889999
Q ss_pred EEEEeCC
Q psy9827 125 LIVQNRR 131 (627)
Q Consensus 125 L~v~r~~ 131 (627)
|+|.|..
T Consensus 83 l~v~R~~ 89 (92)
T 2qg1_A 83 LEVGRIS 89 (92)
T ss_dssp EEEECCC
T ss_pred EEEEccc
Confidence 9999754
No 67
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.31 E-value=9.9e-12 Score=108.16 Aligned_cols=84 Identities=21% Similarity=0.387 Sum_probs=73.8
Q ss_pred CCCceEEEeccCC-ceeEEEEccC------CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcC
Q psy9827 48 EPDPRFITFQKEG-SVGIRLTGGN------KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSL 119 (627)
Q Consensus 48 ~~~~r~v~l~k~g-~lG~~i~g~~------~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~ 119 (627)
.+..+.|.+.|.+ +|||++.++. ..+++|..|.++|||+++| |++||+|++|||.++.++++.+++.+++..
T Consensus 13 ~~~~~~v~l~k~~~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 92 (108)
T 2d92_A 13 SPEVKIVELVKDCKGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAV 92 (108)
T ss_dssp CSSCEEEEEEECSSCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHS
T ss_pred CCceEEEEEEECCCccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 4567889988864 8999999852 4679999999999999999 999999999999999999999999999874
Q ss_pred -CCeeEEEEEeCC
Q psy9827 120 -QDQIHLIVQNRR 131 (627)
Q Consensus 120 -g~~V~L~v~r~~ 131 (627)
+..|.|+|.|..
T Consensus 93 ~~~~v~l~v~R~~ 105 (108)
T 2d92_A 93 PPGLVHLGICSGP 105 (108)
T ss_dssp CSEEEEEEEECCC
T ss_pred CCCeEEEEEEcCC
Confidence 678999998754
No 68
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.31 E-value=2.6e-12 Score=108.20 Aligned_cols=83 Identities=28% Similarity=0.431 Sum_probs=72.4
Q ss_pred CCceEEEeccC-CceeEEEEccC-CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEE
Q psy9827 49 PDPRFITFQKE-GSVGIRLTGGN-KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLI 126 (627)
Q Consensus 49 ~~~r~v~l~k~-g~lG~~i~g~~-~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~ 126 (627)
+.+|.+.+.+. ++|||++.+.. ..+++|..|.++|||+++||++||+|++|||.++.++++.++...++..++.+.|+
T Consensus 2 ~~pr~v~l~k~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~ 81 (91)
T 2vsp_A 2 MKPKLCRLAKGENGYGFHLNAIRGLPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVVDRIQSSGKNVTLL 81 (91)
T ss_dssp CCEEEEEEECBTTBTSCCCBCCTTCSCCBC-CCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHTTSCSEEEEE
T ss_pred CCcEEEEEEeCCCcccEEEEeccCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEE
Confidence 57899999886 48999998753 46899999999999999999999999999999999999999999998779999999
Q ss_pred EEeCC
Q psy9827 127 VQNRR 131 (627)
Q Consensus 127 v~r~~ 131 (627)
|.|..
T Consensus 82 v~r~~ 86 (91)
T 2vsp_A 82 VCGKK 86 (91)
T ss_dssp EEC--
T ss_pred EEeCC
Confidence 99754
No 69
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.31 E-value=1.1e-11 Score=103.33 Aligned_cols=79 Identities=25% Similarity=0.357 Sum_probs=69.0
Q ss_pred EEEeccCCceeEEEEccCC--CCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEeC
Q psy9827 53 FITFQKEGSVGIRLTGGNK--VGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQNR 130 (627)
Q Consensus 53 ~v~l~k~g~lG~~i~g~~~--~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r~ 130 (627)
.+.+...++|||++.++.+ .|++|..|.++|||+++||++||+|++|||.++.++++.++...++..++.+.|+|.|+
T Consensus 5 ~v~~~~~~~lG~~l~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 84 (87)
T 2pa1_A 5 TVDVAGPAPWGFRITGGRDFHTPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGMLHAEAQSKIRQSPSPLRLQLDRI 84 (87)
T ss_dssp EEEECSSSCCSEEEEEEGGGTEEEEEEEECSSSHHHHTTCCTTCEEEEETTEESTTCCHHHHHHHHHTCCSSEEEEEEEC
T ss_pred EEEECCCCccCEEEecccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEec
Confidence 3444445689999998754 58999999999999999999999999999999999999999998887778999999986
Q ss_pred C
Q psy9827 131 R 131 (627)
Q Consensus 131 ~ 131 (627)
.
T Consensus 85 ~ 85 (87)
T 2pa1_A 85 T 85 (87)
T ss_dssp C
T ss_pred C
Confidence 5
No 70
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.31 E-value=1.5e-11 Score=104.75 Aligned_cols=84 Identities=24% Similarity=0.444 Sum_probs=73.5
Q ss_pred CCceEEEeccCC-ceeEEEEccCC--CCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeE
Q psy9827 49 PDPRFITFQKEG-SVGIRLTGGNK--VGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIH 124 (627)
Q Consensus 49 ~~~r~v~l~k~g-~lG~~i~g~~~--~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~ 124 (627)
+....+.+.+.+ +|||++.++.+ .+++|..|.+||||+++| |++||+|++|||.++.++++.++..+++..+..+.
T Consensus 4 ~~~~~v~l~~~~~~lG~~i~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~ 83 (97)
T 1n7e_A 4 AIIYTVELKRYGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVT 83 (97)
T ss_dssp CCEEEEEEECTTSCCCEEEECCSSTTSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEE
T ss_pred ceEEEEEEEeCCCCcCEEEEcccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 455677787764 69999998753 689999999999999999 99999999999999999999999888888889999
Q ss_pred EEEEeCCc
Q psy9827 125 LIVQNRRD 132 (627)
Q Consensus 125 L~v~r~~~ 132 (627)
|+|.|...
T Consensus 84 l~v~R~~~ 91 (97)
T 1n7e_A 84 LKIKKQTD 91 (97)
T ss_dssp EEEECCCC
T ss_pred EEEEeCCC
Confidence 99998653
No 71
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.31 E-value=1.1e-11 Score=109.52 Aligned_cols=85 Identities=34% Similarity=0.540 Sum_probs=76.7
Q ss_pred CCCceEEEeccC--CceeEEEEccCC-----------CCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHH
Q psy9827 48 EPDPRFITFQKE--GSVGIRLTGGNK-----------VGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAV 113 (627)
Q Consensus 48 ~~~~r~v~l~k~--g~lG~~i~g~~~-----------~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~ 113 (627)
...++.+.+.+. ++|||++.++.+ .|++|..|.++|||+++| |++||+|++|||.++.++++.+++
T Consensus 13 ~~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~ 92 (117)
T 2ehr_A 13 WGPPRIVEIFREPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAV 92 (117)
T ss_dssp BCCCEEEEECCCSSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHH
T ss_pred CCCCEEEEEEeCCCCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 457899999886 489999998753 589999999999999999 999999999999999999999999
Q ss_pred HHHhcCCCeeEEEEEeCCc
Q psy9827 114 LFLLSLQDQIHLIVQNRRD 132 (627)
Q Consensus 114 ~~l~~~g~~V~L~v~r~~~ 132 (627)
..++..+..+.|+|.|...
T Consensus 93 ~~~~~~g~~v~l~v~r~~~ 111 (117)
T 2ehr_A 93 EAIKNAGNPVVFIVQSLSS 111 (117)
T ss_dssp HHHHTSCSSEEEEECCBSC
T ss_pred HHHHcCCCeEEEEEEECCC
Confidence 9999889999999987654
No 72
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.31 E-value=1.1e-11 Score=104.32 Aligned_cols=82 Identities=26% Similarity=0.284 Sum_probs=71.7
Q ss_pred CceEEEeccC-CceeEEEEccCCCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEE
Q psy9827 50 DPRFITFQKE-GSVGIRLTGGNKVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQ 128 (627)
Q Consensus 50 ~~r~v~l~k~-g~lG~~i~g~~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~ 128 (627)
.+|.+.+.+. ++|||++.+. .+++|..|.+||||+++||++||+|++|||.++.++++.++...++..+..+.|+|.
T Consensus 3 ~~r~v~l~~~~~g~G~~l~~~--~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~ 80 (91)
T 2f5y_A 3 RYRQITIPRGKDGFGFTICCD--SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILLVW 80 (91)
T ss_dssp EEEEEEEECBTTBTSEEEECS--SSCEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEE
T ss_pred ceEEEEEEeCCCCccEEEecC--CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEE
Confidence 4678888876 5899999875 469999999999999999999999999999999999999998888887889999999
Q ss_pred eCCcc
Q psy9827 129 NRRDE 133 (627)
Q Consensus 129 r~~~~ 133 (627)
|+.+.
T Consensus 81 R~~~~ 85 (91)
T 2f5y_A 81 RMVPQ 85 (91)
T ss_dssp ECC--
T ss_pred eCCCC
Confidence 86644
No 73
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.31 E-value=2.3e-11 Score=106.08 Aligned_cols=82 Identities=30% Similarity=0.539 Sum_probs=71.1
Q ss_pred eEEEecc-CCceeEEEEcc--------CCCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCe
Q psy9827 52 RFITFQK-EGSVGIRLTGG--------NKVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQ 122 (627)
Q Consensus 52 r~v~l~k-~g~lG~~i~g~--------~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~ 122 (627)
..+.+.+ .++|||++.++ ...|++|..|.++|||+++||++||+|++|||.++.++++.++...++..++.
T Consensus 17 ~~~~l~~~~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~ 96 (110)
T 1x5q_A 17 LTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRGAGTA 96 (110)
T ss_dssp EEEEEECSSSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHSCCSE
T ss_pred EEEEEecCCCeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHhhCCCCe
Confidence 3445555 46999999975 24689999999999999999999999999999999999999988888888999
Q ss_pred eEEEEEeCCcc
Q psy9827 123 IHLIVQNRRDE 133 (627)
Q Consensus 123 V~L~v~r~~~~ 133 (627)
|.|+|.|++..
T Consensus 97 v~l~v~R~g~~ 107 (110)
T 1x5q_A 97 VQMRVWRESGP 107 (110)
T ss_dssp EEEEEEECSSC
T ss_pred EEEEEEECCcc
Confidence 99999987643
No 74
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.31 E-value=8.7e-12 Score=106.40 Aligned_cols=83 Identities=31% Similarity=0.507 Sum_probs=72.2
Q ss_pred CCceEEEeccC--CceeEEEEccC--------CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHh
Q psy9827 49 PDPRFITFQKE--GSVGIRLTGGN--------KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLL 117 (627)
Q Consensus 49 ~~~r~v~l~k~--g~lG~~i~g~~--------~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~ 117 (627)
..++.+.+.|. ++|||++.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++...++
T Consensus 4 e~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~ 83 (98)
T 1ihj_A 4 ELIHMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIK 83 (98)
T ss_dssp CEEEEEEEECTTSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred ceEEEEEEEeCCCCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 34577888873 48999998863 2389999999999999999 9999999999999999999999988888
Q ss_pred cCCCeeEEEEEeCC
Q psy9827 118 SLQDQIHLIVQNRR 131 (627)
Q Consensus 118 ~~g~~V~L~v~r~~ 131 (627)
..+..+.|+|.|++
T Consensus 84 ~~g~~v~l~v~R~g 97 (98)
T 1ihj_A 84 EADFKIELEIQTFD 97 (98)
T ss_dssp HSCSEEEEEEEEC-
T ss_pred cCCCeEEEEEEeCC
Confidence 88999999999854
No 75
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.31 E-value=1.3e-11 Score=108.92 Aligned_cols=90 Identities=30% Similarity=0.492 Sum_probs=79.0
Q ss_pred CCceEEEeccC-CceeEEEEccCCCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEE
Q psy9827 49 PDPRFITFQKE-GSVGIRLTGGNKVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIV 127 (627)
Q Consensus 49 ~~~r~v~l~k~-g~lG~~i~g~~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v 127 (627)
.+++.|.+.+. .+|||++.++.+.|++|..|.++|||+++||++||+|++|||.++.++++.++...+...++.+.|+|
T Consensus 18 ~~~~~v~l~~~~~~lG~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~l~v 97 (117)
T 1uit_A 18 EEPRHVKVQKGSEPLGISIVSGEKGGIYVSKVTVGSIAHQAGLEYGDQLLEFNGINLRSATEQQARLIIGQQCDTITILA 97 (117)
T ss_dssp CCCEEEEEECSSCCCCEEEEECTTSCEEEEEECTTSHHHHHTCCTTCEECEETTEETTTCCHHHHHHHTTSCCSEEEEEE
T ss_pred CCCEEEEEEeCCCCccEEEEccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEE
Confidence 35677888775 48999999887789999999999999999999999999999999999999998877778899999999
Q ss_pred EeCCcccceee
Q psy9827 128 QNRRDEYEHVV 138 (627)
Q Consensus 128 ~r~~~~~~~~v 138 (627)
.|++..+....
T Consensus 98 ~r~~~~~~~~~ 108 (117)
T 1uit_A 98 QYNPHVHQLSS 108 (117)
T ss_dssp CCCSCCCCCCC
T ss_pred EECCchhhhhh
Confidence 99877665443
No 76
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.30 E-value=1.8e-11 Score=102.96 Aligned_cols=81 Identities=22% Similarity=0.496 Sum_probs=71.0
Q ss_pred CceEEEeccC---CceeEEEEccC-CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEE
Q psy9827 50 DPRFITFQKE---GSVGIRLTGGN-KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHL 125 (627)
Q Consensus 50 ~~r~v~l~k~---g~lG~~i~g~~-~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L 125 (627)
+.+.+.+.+. ++|||++.++. ..|++|..|.++|||+++||++||+|++|||.++.++++.++...++..++.+.|
T Consensus 6 ~~~~v~l~k~~~~~~~G~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l 85 (91)
T 1m5z_A 6 ELHKVTLYKDSGMEDFGFSVADGLLEKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDL 85 (91)
T ss_dssp EEEEEEEECCTTCSSSSEEEEECTTSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEE
T ss_pred ceEEEEEEECCCCCCccEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEE
Confidence 4566777764 37999999864 4689999999999999999999999999999999999999988888888999999
Q ss_pred EEEeC
Q psy9827 126 IVQNR 130 (627)
Q Consensus 126 ~v~r~ 130 (627)
+|.|+
T Consensus 86 ~v~R~ 90 (91)
T 1m5z_A 86 VISRN 90 (91)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 99874
No 77
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.30 E-value=1.4e-11 Score=104.46 Aligned_cols=82 Identities=23% Similarity=0.390 Sum_probs=71.9
Q ss_pred ceEEEeccC---CceeEEEEccC-CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEE
Q psy9827 51 PRFITFQKE---GSVGIRLTGGN-KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHL 125 (627)
Q Consensus 51 ~r~v~l~k~---g~lG~~i~g~~-~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L 125 (627)
...+.|.|. .+|||++.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++...++..+..+.|
T Consensus 4 ~~~v~l~k~~~~~~lG~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l 83 (95)
T 2vwr_A 4 ILQVALHKRDSGEQLGIKLVRRTDEPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQASGERVNL 83 (95)
T ss_dssp EEEEEEECSSTTCCCCEEEEECSSSCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEE
T ss_pred EEEEEEEECCCCCcccEEEEeccCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEE
Confidence 345677764 37999998864 4689999999999999999 999999999999999999999999888888999999
Q ss_pred EEEeCCc
Q psy9827 126 IVQNRRD 132 (627)
Q Consensus 126 ~v~r~~~ 132 (627)
++.|++.
T Consensus 84 ~v~R~~~ 90 (95)
T 2vwr_A 84 TIARPGK 90 (95)
T ss_dssp EEEEESC
T ss_pred EEEcCCc
Confidence 9998654
No 78
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.30 E-value=8.5e-12 Score=105.68 Aligned_cols=82 Identities=29% Similarity=0.404 Sum_probs=73.0
Q ss_pred CceEEEeccCCceeEEEEccC--CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEE
Q psy9827 50 DPRFITFQKEGSVGIRLTGGN--KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIV 127 (627)
Q Consensus 50 ~~r~v~l~k~g~lG~~i~g~~--~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v 127 (627)
.++.+.+.+..+|||++.++. ..+++|..|.++|||+++||++||+|++|||.++.++++.++...++..+..+.|+|
T Consensus 8 ~~~~v~l~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v 87 (94)
T 2eeg_A 8 MPHSVTLRGPSPWGFRLVGGRDFSAPLTISRVHAGSKAALAALCPGDLIQAINGESTELMTHLEAQNRIKGCHDHLTLSV 87 (94)
T ss_dssp CCEEEEECCSSCCSCCEECCTTTTSCCEECCCCSSSHHHHTTCCTTCEEEEETTEETTTCCHHHHHHHHHTCCSCEEEEE
T ss_pred ceEEEEEeCCCccCEEEECccCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEE
Confidence 567788877779999999875 357999999999999999999999999999999999999998888888888999999
Q ss_pred EeCC
Q psy9827 128 QNRR 131 (627)
Q Consensus 128 ~r~~ 131 (627)
.|+.
T Consensus 88 ~R~g 91 (94)
T 2eeg_A 88 SSGP 91 (94)
T ss_dssp ECCS
T ss_pred EeCC
Confidence 8754
No 79
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.30 E-value=8.1e-12 Score=108.11 Aligned_cols=84 Identities=26% Similarity=0.521 Sum_probs=73.6
Q ss_pred CCceEEEeccC-CceeEEEEccCC--------CCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhc
Q psy9827 49 PDPRFITFQKE-GSVGIRLTGGNK--------VGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLS 118 (627)
Q Consensus 49 ~~~r~v~l~k~-g~lG~~i~g~~~--------~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~ 118 (627)
++...+.+.+. .+|||++.++.+ .+++|..|.++|||+++| |++||+|++|||.++.++++.++...++.
T Consensus 6 ~~~~~v~l~~~~~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~ 85 (105)
T 1wha_A 6 SGRHVACLARSERGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTA 85 (105)
T ss_dssp CEEEEEEECCCTTCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHTS
T ss_pred CeeEEEEEEeCCCccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 34456677775 489999998643 689999999999999999 99999999999999999999999999998
Q ss_pred CCCeeEEEEEeCCc
Q psy9827 119 LQDQIHLIVQNRRD 132 (627)
Q Consensus 119 ~g~~V~L~v~r~~~ 132 (627)
.+..|.|+|.|+.+
T Consensus 86 ~g~~v~l~v~R~~~ 99 (105)
T 1wha_A 86 ASPTIALLLEREAG 99 (105)
T ss_dssp CCSCEEEEEEECCC
T ss_pred CCCeEEEEEEECCC
Confidence 89999999998654
No 80
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.29 E-value=1.1e-11 Score=105.57 Aligned_cols=81 Identities=30% Similarity=0.582 Sum_probs=71.6
Q ss_pred eEEEeccC-CceeEEEEccC------CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCee
Q psy9827 52 RFITFQKE-GSVGIRLTGGN------KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQDQI 123 (627)
Q Consensus 52 r~v~l~k~-g~lG~~i~g~~------~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V 123 (627)
..+.+.+. ++|||++.++. ..+++|..|.++|||+++| |++||+|++|||.++.++++.++...++..+..+
T Consensus 5 ~~v~l~k~~~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v 84 (97)
T 2jil_A 5 VEVTLHKEGNTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQEA 84 (97)
T ss_dssp EEEEEECBTTBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSCSEE
T ss_pred EEEEEEeCCCccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 45667665 48999999874 3589999999999999999 9999999999999999999999998888889999
Q ss_pred EEEEEeCCc
Q psy9827 124 HLIVQNRRD 132 (627)
Q Consensus 124 ~L~v~r~~~ 132 (627)
.|+|.|+..
T Consensus 85 ~l~v~R~~~ 93 (97)
T 2jil_A 85 ALLIEYDVS 93 (97)
T ss_dssp EEEEEEECC
T ss_pred EEEEEeCCC
Confidence 999998664
No 81
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.29 E-value=1.7e-11 Score=106.38 Aligned_cols=75 Identities=35% Similarity=0.504 Sum_probs=68.2
Q ss_pred CCceeEEEEccCC-------CCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEeC
Q psy9827 59 EGSVGIRLTGGNK-------VGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQNR 130 (627)
Q Consensus 59 ~g~lG~~i~g~~~-------~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r~ 130 (627)
.++|||++.+|.+ .|++|..|.+||||+++| |++||+|++|||.++.++++.++...++..+..|.|+|.|+
T Consensus 12 ~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 91 (106)
T 4amh_A 12 SKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTSDFVYLKVAKP 91 (106)
T ss_dssp CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCCSEEEEEEECC
T ss_pred CCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEEeC
Confidence 4689999999843 389999999999999999 99999999999999999999999999998899999999987
Q ss_pred Ccc
Q psy9827 131 RDE 133 (627)
Q Consensus 131 ~~~ 133 (627)
...
T Consensus 92 ~~~ 94 (106)
T 4amh_A 92 GSG 94 (106)
T ss_dssp SSS
T ss_pred CCC
Confidence 643
No 82
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.29 E-value=1.8e-11 Score=102.03 Aligned_cols=80 Identities=35% Similarity=0.590 Sum_probs=70.9
Q ss_pred CceEEEeccC--CceeEEEEccCC--CCEEEEEeCCCChhhh-cCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeE
Q psy9827 50 DPRFITFQKE--GSVGIRLTGGNK--VGIFVTAVQPGSPASL-QGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIH 124 (627)
Q Consensus 50 ~~r~v~l~k~--g~lG~~i~g~~~--~gi~V~~V~~gspA~~-aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~ 124 (627)
+++.+.+.+. .+|||++.++.+ .+++|..|.+||||++ +||++||+|++|||.++.++++.++...++.+++.+.
T Consensus 2 ~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~ 81 (87)
T 4e34_A 2 PIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIE 81 (87)
T ss_dssp CCEEEEEECCTTBCCCEEEEEEGGGTEEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHHCCSEEE
T ss_pred CEEEEEEEECCCCcccEEEEccCCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 5678888875 489999998643 4699999999999999 6999999999999999999999999999998888999
Q ss_pred EEEEe
Q psy9827 125 LIVQN 129 (627)
Q Consensus 125 L~v~r 129 (627)
|+|.+
T Consensus 82 l~v~~ 86 (87)
T 4e34_A 82 FEVVY 86 (87)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 98874
No 83
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.29 E-value=5.7e-12 Score=113.07 Aligned_cols=95 Identities=22% Similarity=0.369 Sum_probs=79.3
Q ss_pred CCCccccccCCCCceE----EEeccC--CceeEEEEccCC------CCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeC
Q psy9827 38 SPDLFSIFFVEPDPRF----ITFQKE--GSVGIRLTGGNK------VGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDM 104 (627)
Q Consensus 38 ~~d~~~~~~~~~~~r~----v~l~k~--g~lG~~i~g~~~------~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v 104 (627)
..+++..++.....+. +.+.+. ++|||++.++.+ .+++|..|.+||||+++| |++||+|++|||.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v 88 (127)
T 1wg6_A 9 KGEPDCYALSLESSEQLTLEIPLNDSGSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETL 88 (127)
T ss_dssp SSCSSSCCSSCCCCEEEEEEEECSSSTTTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEES
T ss_pred CCCCcccccCCCCCCceEEEEEEeeCCCCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEEC
Confidence 3578888888776542 344432 489999998753 489999999999999999 999999999999999
Q ss_pred CCCCHHHHHHHHhcC-------CCeeEEEEEeCCc
Q psy9827 105 KGITREEAVLFLLSL-------QDQIHLIVQNRRD 132 (627)
Q Consensus 105 ~~~~~~~~~~~l~~~-------g~~V~L~v~r~~~ 132 (627)
.++++.+++.+++.. +..|.|+|.|+..
T Consensus 89 ~~~~~~~~~~~l~~~~~~~g~~~~~v~l~v~R~~~ 123 (127)
T 1wg6_A 89 LGKSNHEAMETLRRSMSMEGNIRGMIQLVILRRSG 123 (127)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHTCEEEEEEEECSC
T ss_pred CCCCHHHHHHHHHHhhccccCCCCEEEEEEEeCCC
Confidence 999999999998864 7899999998654
No 84
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.29 E-value=2.1e-11 Score=103.72 Aligned_cols=81 Identities=28% Similarity=0.484 Sum_probs=71.1
Q ss_pred CCceEEEeccC--CceeEEEEc-------cC--CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHh
Q psy9827 49 PDPRFITFQKE--GSVGIRLTG-------GN--KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLL 117 (627)
Q Consensus 49 ~~~r~v~l~k~--g~lG~~i~g-------~~--~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~ 117 (627)
+.++.|.+.|. ++|||++.+ +. ..+++|..|.++|||+++||++||+|++|||.++.++++.++...++
T Consensus 3 ~~~r~v~l~k~~~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~ 82 (96)
T 2ego_A 3 QQRKVLTLEKGDNQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAGLTPGDTIASVNGLNVEGIRHREIVDIIK 82 (96)
T ss_dssp CCEEEEEEECCTTCCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CccEEEEEEeCCCCCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57888999886 489999997 22 24799999999999999999999999999999999999999998888
Q ss_pred cCCCeeEEEEEe
Q psy9827 118 SLQDQIHLIVQN 129 (627)
Q Consensus 118 ~~g~~V~L~v~r 129 (627)
..++.+.|+|.+
T Consensus 83 ~~~~~v~l~v~~ 94 (96)
T 2ego_A 83 ASGNVLRLETLY 94 (96)
T ss_dssp HTTTEEEEEEEC
T ss_pred hCCCeEEEEEEE
Confidence 778899999875
No 85
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.29 E-value=2.1e-11 Score=105.79 Aligned_cols=84 Identities=27% Similarity=0.448 Sum_probs=73.5
Q ss_pred CCceEEEeccC-CceeEEEEccCC--------------CCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHH
Q psy9827 49 PDPRFITFQKE-GSVGIRLTGGNK--------------VGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAV 113 (627)
Q Consensus 49 ~~~r~v~l~k~-g~lG~~i~g~~~--------------~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~ 113 (627)
..++.+.+.+. ++|||++.++.+ .+++|..|.++|||+++||++||+|++|||.++.++++.++.
T Consensus 5 ~~~r~v~l~k~~~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~ 84 (107)
T 3qe1_A 5 GSPRVVRIVKSESGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVV 84 (107)
T ss_dssp -CCEEEEEECBTTBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHH
T ss_pred CCcEEEEEEECCCCCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH
Confidence 46788999886 489999998732 235799999999999999999999999999999999999999
Q ss_pred HHHhcCCCeeEEEEEeCCc
Q psy9827 114 LFLLSLQDQIHLIVQNRRD 132 (627)
Q Consensus 114 ~~l~~~g~~V~L~v~r~~~ 132 (627)
..++..++.+.|++.|...
T Consensus 85 ~~l~~~g~~v~l~v~r~~~ 103 (107)
T 3qe1_A 85 DLIRAGEKELILTVLSVES 103 (107)
T ss_dssp HHHHHCSSEEEEEEECSSC
T ss_pred HHHHcCCCEEEEEEEcCCC
Confidence 9999889999999998654
No 86
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.29 E-value=1e-11 Score=107.12 Aligned_cols=89 Identities=18% Similarity=0.325 Sum_probs=75.6
Q ss_pred CCceEEEeccCCceeEEEEccCC--CCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEE
Q psy9827 49 PDPRFITFQKEGSVGIRLTGGNK--VGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLI 126 (627)
Q Consensus 49 ~~~r~v~l~k~g~lG~~i~g~~~--~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~ 126 (627)
.+...+.+....+|||++.++.+ .+++|..|.++|||+++||++||+|++|||.++.++++.++...++..++.+.|+
T Consensus 4 g~~~~v~l~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~ 83 (103)
T 1wf7_A 4 GSSGSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMT 83 (103)
T ss_dssp CCCEEEEEESSSCCSCCEEEETTTTEEEEECCCCTTCHHHHTTCCTTCBEEEETTEECSSCCHHHHHHHHHHCSSEEEEE
T ss_pred CCEEEEEEeCCCccCEEEeccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 35566777766789999998753 4689999999999999999999999999999999999999888888778999999
Q ss_pred EEeCCccccee
Q psy9827 127 VQNRRDEYEHV 137 (627)
Q Consensus 127 v~r~~~~~~~~ 137 (627)
|.|+.......
T Consensus 84 v~R~g~~~~~~ 94 (103)
T 1wf7_A 84 LQRASAAAKSE 94 (103)
T ss_dssp ECCCSCCCCCC
T ss_pred EEeCCCcCCCC
Confidence 99877654443
No 87
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.28 E-value=1.9e-11 Score=103.71 Aligned_cols=79 Identities=38% Similarity=0.600 Sum_probs=70.2
Q ss_pred eEEEeccCCceeEEEEccC----------CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCC
Q psy9827 52 RFITFQKEGSVGIRLTGGN----------KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQD 121 (627)
Q Consensus 52 r~v~l~k~g~lG~~i~g~~----------~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~ 121 (627)
..+.+.+..+|||++.++. ..|++|..|.++|||++ ||++||+|++|||.++.++++.++...++..+.
T Consensus 5 ~~v~l~~~~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~ 83 (95)
T 1mfg_A 5 IRVRVEKDPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQN 83 (95)
T ss_dssp EEEEEECSSSCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCBHHHHHHHHHHCCS
T ss_pred EEEEECCCCCCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-CCCCCCEEEEECCEEcCCCCHHHHHHHhhcCCC
Confidence 3466777779999999863 35899999999999999 999999999999999999999999988888899
Q ss_pred eeEEEEEeCC
Q psy9827 122 QIHLIVQNRR 131 (627)
Q Consensus 122 ~V~L~v~r~~ 131 (627)
.+.|+|.|+.
T Consensus 84 ~v~l~v~R~~ 93 (95)
T 1mfg_A 84 TVELIIVREV 93 (95)
T ss_dssp EEEEEEEEEC
T ss_pred eEEEEEEeCC
Confidence 9999999854
No 88
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=99.28 E-value=2.3e-12 Score=135.44 Aligned_cols=132 Identities=24% Similarity=0.307 Sum_probs=102.1
Q ss_pred cccccccCC-CCCCCCCC-------CceeeeecccccCCCCCccccccCCCCceEEE----ec-----cCCceeEEEEcc
Q psy9827 7 RFITFQKEG-SVGIRLTG-------GNKVGIFVTAVQPGSPDLFSIFFVEPDPRFIT----FQ-----KEGSVGIRLTGG 69 (627)
Q Consensus 7 ~~~~~~~~~-~~~~~~~~-------g~~iGin~~ai~~~~~d~~~~~~~~~~~r~v~----l~-----k~g~lG~~i~g~ 69 (627)
.|..+.+++ ++|.++|+ |++|||| +++....++..+++|++|...... +. ..+.||+++...
T Consensus 171 ~~~~~iq~da~i~~GnSGGPLvn~~G~vVGI~-s~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~~~~lGv~~~~~ 249 (345)
T 3stj_A 171 GLENFIQTDASINRGNSGGALLNLNGELIGIN-TAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTEM 249 (345)
T ss_dssp SSCCEEEECSCCCTTCTTCEEECTTSCEEEEE-EEEECTTSSCSSCEEEEEHHHHHHHHHHHHHHSSCCCEECCEEEEEC
T ss_pred CccCEEEEecccCCCcCccceeCCCCEEEEEE-eccccCCCCcceeEEEEehHHHHHHHHHHHhcccccccccceeeEee
Confidence 355566666 88988875 6788999 888888778889999999543221 11 235899998864
Q ss_pred C-----------CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEeCCcccceee
Q psy9827 70 N-----------KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQNRRDEYEHVV 138 (627)
Q Consensus 70 ~-----------~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r~~~~~~~~v 138 (627)
. ..|++|..|.+||||+++||++||+|++|||..+.++.+..........|+.|.|+|.|++......+
T Consensus 250 ~~~~a~~~gl~~~~G~~V~~V~~~spA~~aGL~~GDvI~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v 329 (345)
T 3stj_A 250 SADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKPLEVEV 329 (345)
T ss_dssp CHHHHHHTTCSCCSSEEEEEECTTSHHHHHTCCTTCEECEETTEECSCHHHHHHHHHTSCTTCEEEEEEEETTEEEEEEE
T ss_pred cHHHHHhcCCCCCceEEEEEeccCChHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEE
Confidence 2 36899999999999999999999999999999999776555444334689999999999887665554
Q ss_pred e
Q psy9827 139 A 139 (627)
Q Consensus 139 ~ 139 (627)
.
T Consensus 330 ~ 330 (345)
T 3stj_A 330 T 330 (345)
T ss_dssp E
T ss_pred E
Confidence 3
No 89
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.28 E-value=1.7e-11 Score=106.91 Aligned_cols=87 Identities=25% Similarity=0.434 Sum_probs=75.6
Q ss_pred CCceEEEeccC-CceeEEEEccC-----CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCCC
Q psy9827 49 PDPRFITFQKE-GSVGIRLTGGN-----KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQD 121 (627)
Q Consensus 49 ~~~r~v~l~k~-g~lG~~i~g~~-----~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~ 121 (627)
.+.+.+.+.+. .+|||++.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++...++..+.
T Consensus 7 ~~~~~v~l~~~~~glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~ 86 (110)
T 1um1_A 7 GYVFTVELERGPSGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHGGK 86 (110)
T ss_dssp CCEEEEEEECCTTCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTCCS
T ss_pred CcEEEEEEEECCCccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 35566777775 58999999863 4589999999999999999 99999999999999999999999999998899
Q ss_pred eeEEEEEeCCcccc
Q psy9827 122 QIHLIVQNRRDEYE 135 (627)
Q Consensus 122 ~V~L~v~r~~~~~~ 135 (627)
.+.|+|.|......
T Consensus 87 ~v~l~v~R~~~~~~ 100 (110)
T 1um1_A 87 KMRFLVAKSDVETA 100 (110)
T ss_dssp EEEEEEECCCHHHH
T ss_pred eEEEEEEeCCccee
Confidence 99999998765443
No 90
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.28 E-value=1.7e-11 Score=108.55 Aligned_cols=87 Identities=33% Similarity=0.670 Sum_probs=77.0
Q ss_pred CCCceEEEeccC-CceeEEEEccC-CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeE
Q psy9827 48 EPDPRFITFQKE-GSVGIRLTGGN-KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIH 124 (627)
Q Consensus 48 ~~~~r~v~l~k~-g~lG~~i~g~~-~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~ 124 (627)
.+.++.+.+.+. .+|||++.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++...++..+..+.
T Consensus 12 ~~~~~~v~l~k~~~glG~~l~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~ 91 (119)
T 1tp5_A 12 PREPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT 91 (119)
T ss_dssp CCSCEEEEEECTTSCCCEEEEECGGGCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSEEE
T ss_pred CCccEEEEEEECCCCccEEEecCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 357888999886 48999999874 3689999999999999999 99999999999999999999998888888899999
Q ss_pred EEEEeCCccc
Q psy9827 125 LIVQNRRDEY 134 (627)
Q Consensus 125 L~v~r~~~~~ 134 (627)
|++.|++..+
T Consensus 92 l~v~r~~~~~ 101 (119)
T 1tp5_A 92 IIAQYKPEEY 101 (119)
T ss_dssp EEEEECHHHH
T ss_pred EEEEECCchh
Confidence 9999876543
No 91
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.28 E-value=1e-11 Score=107.91 Aligned_cols=82 Identities=27% Similarity=0.543 Sum_probs=71.8
Q ss_pred ceEEEeccC-CceeEEEEc---c-----CCCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCC
Q psy9827 51 PRFITFQKE-GSVGIRLTG---G-----NKVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQ 120 (627)
Q Consensus 51 ~r~v~l~k~-g~lG~~i~g---~-----~~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g 120 (627)
.+.+.+.+. .+|||++.+ + ...|++|..|.++|||+++| |++||+|++|||.++.++++.++...++..+
T Consensus 10 ~~~v~l~k~~~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 89 (107)
T 1wf8_A 10 LFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNTK 89 (107)
T ss_dssp EEEEEEECBTTBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHHHCC
T ss_pred EEEEEEEECCCcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCC
Confidence 355667665 489999998 2 24589999999999999999 9999999999999999999999999998889
Q ss_pred CeeEEEEEeCCc
Q psy9827 121 DQIHLIVQNRRD 132 (627)
Q Consensus 121 ~~V~L~v~r~~~ 132 (627)
+.|.|+|.|...
T Consensus 90 ~~v~l~v~R~~~ 101 (107)
T 1wf8_A 90 GNVRFVIGREKP 101 (107)
T ss_dssp SEEEEEEEEECC
T ss_pred CeEEEEEEeCCC
Confidence 999999998654
No 92
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.27 E-value=3.1e-11 Score=105.48 Aligned_cols=91 Identities=25% Similarity=0.487 Sum_probs=75.1
Q ss_pred ccccCCCCceEEE--eccC-CceeEEEEccCC-----CCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHH
Q psy9827 43 SIFFVEPDPRFIT--FQKE-GSVGIRLTGGNK-----VGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAV 113 (627)
Q Consensus 43 ~~~~~~~~~r~v~--l~k~-g~lG~~i~g~~~-----~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~ 113 (627)
+.|+...+.+.+. +.+. .+|||++.+..+ .|++|..|.++|||+++| |++||+|++|||.++.++++.++.
T Consensus 2 s~y~~~~~~~~~~~~l~~~~~glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~ 81 (111)
T 2koj_A 2 SVYNTKKVGKRLNIQLKKGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVV 81 (111)
T ss_dssp CCCCCSSSCEEEEEEEECBTTBTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHH
T ss_pred CcccCcccCcEEEEEEEECCCccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 4566666665544 4444 489999998753 689999999999999999 999999999999999999999998
Q ss_pred HHHhcC--CCeeEEEEEeCCcc
Q psy9827 114 LFLLSL--QDQIHLIVQNRRDE 133 (627)
Q Consensus 114 ~~l~~~--g~~V~L~v~r~~~~ 133 (627)
.+++.. +..|.|+|.|+...
T Consensus 82 ~~l~~~~~g~~v~l~v~R~~~~ 103 (111)
T 2koj_A 82 SLLRSTKMEGTVSLLVFRQEEA 103 (111)
T ss_dssp HHHHHCCCSSEEEEEEEECCCC
T ss_pred HHHHhCCCCCeEEEEEEeCCCC
Confidence 888753 88999999986643
No 93
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.27 E-value=1.5e-11 Score=105.83 Aligned_cols=85 Identities=25% Similarity=0.458 Sum_probs=75.3
Q ss_pred CCCceEEEeccC-CceeEEEEccC-CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEE
Q psy9827 48 EPDPRFITFQKE-GSVGIRLTGGN-KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHL 125 (627)
Q Consensus 48 ~~~~r~v~l~k~-g~lG~~i~g~~-~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L 125 (627)
.+.+|.+.+.+. .+|||++.+.. ..|++|..|.++|||+++||++||+|++|||.++.++++.++...++..++.+.|
T Consensus 4 ~~~~r~v~l~k~~~g~G~~l~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l 83 (102)
T 2d90_A 4 GSSGRVVVIKKGSNGYGFYLRAGPEQKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTL 83 (102)
T ss_dssp CSSSEEEEEECCSSSSSCEEEECSSSSSEEEECCCTTSTTTTTTCCTTCEEEEESSCBCTTSCHHHHHHHHHHSTTEEEE
T ss_pred CCCCEEEEEeeCCCCccEEEEeecCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEE
Confidence 467899999886 48999999753 4689999999999999999999999999999999999988888888878999999
Q ss_pred EEEeCCc
Q psy9827 126 IVQNRRD 132 (627)
Q Consensus 126 ~v~r~~~ 132 (627)
++.|+..
T Consensus 84 ~v~r~~~ 90 (102)
T 2d90_A 84 LVLDKEA 90 (102)
T ss_dssp EECSTTC
T ss_pred EEEECCC
Confidence 9987543
No 94
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.27 E-value=2.7e-11 Score=102.39 Aligned_cols=82 Identities=24% Similarity=0.390 Sum_probs=71.3
Q ss_pred CCCceEEEeccCC-ceeEEEEccCCCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEE
Q psy9827 48 EPDPRFITFQKEG-SVGIRLTGGNKVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLI 126 (627)
Q Consensus 48 ~~~~r~v~l~k~g-~lG~~i~g~~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~ 126 (627)
.+.+|.+.+.+.+ +|||++.+. .+++|..|.++|||+++||++||+|++|||.++.++++.++...++ .++.|.|+
T Consensus 6 ~~~~r~v~l~~~~~~~G~~l~~~--~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~-~g~~v~l~ 82 (93)
T 2dls_A 6 SGVQRCVIIQKDQHGFGFTVSGD--RIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHLEVVKLIK-SGAYVALT 82 (93)
T ss_dssp CCCEEEEEEECSSSSCCEEEECS--SSCEEEEECSSSTTTTTTCCSSCEEEEETTEECSSSCHHHHHHHHT-SSSEEEEE
T ss_pred CCCCEEEEEEeCCCceeEEEeCC--CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhc-CCCEEEEE
Confidence 3567888888864 899999864 5899999999999999999999999999999999999988777666 68999999
Q ss_pred EEeCCc
Q psy9827 127 VQNRRD 132 (627)
Q Consensus 127 v~r~~~ 132 (627)
|.|+..
T Consensus 83 v~R~~~ 88 (93)
T 2dls_A 83 LLGSSS 88 (93)
T ss_dssp EECCCC
T ss_pred EEECCC
Confidence 998653
No 95
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.27 E-value=2.5e-11 Score=102.47 Aligned_cols=82 Identities=21% Similarity=0.337 Sum_probs=72.5
Q ss_pred CceEEEeccCC-ceeEEEEccC-CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEE
Q psy9827 50 DPRFITFQKEG-SVGIRLTGGN-KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLI 126 (627)
Q Consensus 50 ~~r~v~l~k~g-~lG~~i~g~~-~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~ 126 (627)
..+.+.+.|.+ +|||++.+.. ..+++|..|.+||||+++| |++||+|++|||.++.+.++.++..+++..+..++|+
T Consensus 4 ~~r~v~l~k~~~~lG~~i~~~~~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~ 83 (93)
T 3o46_A 4 SVKIIRLVKNREPLGATIKKDEQTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQGAITFK 83 (93)
T ss_dssp CCEEEEEEESSSCCCEEEEECTTTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCCEEEEEE
T ss_pred cEEEEEEEeCCCCccEEEEecCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEE
Confidence 46788888865 8999999863 3689999999999999999 9999999999999999999999999998887899999
Q ss_pred EEeCC
Q psy9827 127 VQNRR 131 (627)
Q Consensus 127 v~r~~ 131 (627)
|.+..
T Consensus 84 v~~~~ 88 (93)
T 3o46_A 84 IIPGS 88 (93)
T ss_dssp EECC-
T ss_pred EEeCC
Confidence 98643
No 96
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.27 E-value=4.9e-12 Score=104.46 Aligned_cols=80 Identities=28% Similarity=0.536 Sum_probs=71.2
Q ss_pred CCceEEEeccC-CceeEEEEccCCCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEE
Q psy9827 49 PDPRFITFQKE-GSVGIRLTGGNKVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIV 127 (627)
Q Consensus 49 ~~~r~v~l~k~-g~lG~~i~g~~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v 127 (627)
|.++.+.+.+. .+|||++.+. .+++|..|.++|||+++||++||+|++|||.++.++++.++...++..++.+.|+|
T Consensus 1 ~~~r~v~l~~~~~g~G~~~~~~--~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v 78 (83)
T 2kv8_A 1 PRVRSVEVARGRAGYGFTLSGQ--APCVLSCVMRGSPADFVGLRAGDQILAVNEINVKKASHEDVVKLIGKCSGVLHMVI 78 (83)
T ss_dssp CCEEEEEECCCSSCCSCBCCCS--SSCBCCBCCTTSTTTTTTCCTTCEEEEETTEECSSCCHHHHHHHHTTCSSCEEEEE
T ss_pred CCcEEEEEEeCCCcccEEEEcC--CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEE
Confidence 45788999886 5899988765 47999999999999999999999999999999999999999988887778899999
Q ss_pred EeC
Q psy9827 128 QNR 130 (627)
Q Consensus 128 ~r~ 130 (627)
.|+
T Consensus 79 ~R~ 81 (83)
T 2kv8_A 79 AEG 81 (83)
T ss_dssp ECC
T ss_pred EcC
Confidence 875
No 97
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.27 E-value=1.4e-11 Score=103.42 Aligned_cols=80 Identities=24% Similarity=0.446 Sum_probs=69.4
Q ss_pred ceEEEeccC-CceeEEEEccC--CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcC--CCeeE
Q psy9827 51 PRFITFQKE-GSVGIRLTGGN--KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSL--QDQIH 124 (627)
Q Consensus 51 ~r~v~l~k~-g~lG~~i~g~~--~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~--g~~V~ 124 (627)
++.+.+.+. .+|||++.++. ..+++|..|.++|||+++| |++||+|++|||.++.+.++.++...++.. +..|.
T Consensus 3 ~~~v~l~~~~~g~G~~~~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~v~ 82 (90)
T 2q9v_A 3 EQDIFLWRKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQGHVN 82 (90)
T ss_dssp EEEEEEECBTTBCCEEEEECSSTTSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEE
T ss_pred cEEEEEEECCCccCEEEEccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEE
Confidence 467777775 58999999873 3579999999999999999 999999999999999999999998888765 34899
Q ss_pred EEEEeC
Q psy9827 125 LIVQNR 130 (627)
Q Consensus 125 L~v~r~ 130 (627)
|+|.|.
T Consensus 83 l~v~R~ 88 (90)
T 2q9v_A 83 LTVRQT 88 (90)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 999874
No 98
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.27 E-value=1.9e-11 Score=109.71 Aligned_cols=85 Identities=21% Similarity=0.426 Sum_probs=75.0
Q ss_pred CCCCceEEEeccC---CceeEEEEccCC-----------CCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHH
Q psy9827 47 VEPDPRFITFQKE---GSVGIRLTGGNK-----------VGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREE 111 (627)
Q Consensus 47 ~~~~~r~v~l~k~---g~lG~~i~g~~~-----------~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~ 111 (627)
....++.+.+.+. ++|||++.++.+ .|++|..|.+||||+++| |++||+|++|||.++.+.++.+
T Consensus 26 ~~~~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~ 105 (128)
T 1nf3_C 26 LPETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQ 105 (128)
T ss_dssp SCTTCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHH
T ss_pred CCCccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH
Confidence 3457788999886 489999997632 479999999999999999 9999999999999999999999
Q ss_pred HHHHHhcCCCeeEEEEEeCC
Q psy9827 112 AVLFLLSLQDQIHLIVQNRR 131 (627)
Q Consensus 112 ~~~~l~~~g~~V~L~v~r~~ 131 (627)
+..+++..+..|.|+|.|..
T Consensus 106 ~~~~l~~~~~~v~l~v~r~~ 125 (128)
T 1nf3_C 106 VTDMMIANSRNLIITVRPAN 125 (128)
T ss_dssp HHHHHHHTTTSEEEEEECCC
T ss_pred HHHHHHcCCCeEEEEEEECC
Confidence 99999888889999999754
No 99
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.27 E-value=1.3e-11 Score=107.51 Aligned_cols=83 Identities=28% Similarity=0.544 Sum_probs=72.5
Q ss_pred CceEEEeccC--CceeEEEEccC----CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcC---
Q psy9827 50 DPRFITFQKE--GSVGIRLTGGN----KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSL--- 119 (627)
Q Consensus 50 ~~r~v~l~k~--g~lG~~i~g~~----~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~--- 119 (627)
+++.+.|.+. .+|||++.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.+++..++..
T Consensus 5 ~~~~v~l~k~~~~~lG~~i~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~ 84 (108)
T 3cbz_A 5 NIITVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVHK 84 (108)
T ss_dssp CEEEEEECHHHHCCCCEEEEEECSSTTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHTS
T ss_pred eEEEEEEEeCCCCccCEEEEcCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcccC
Confidence 6778888864 58999999863 4689999999999999999 999999999999999999999999988854
Q ss_pred CCeeEEEEEeCCc
Q psy9827 120 QDQIHLIVQNRRD 132 (627)
Q Consensus 120 g~~V~L~v~r~~~ 132 (627)
+..|.|+|.|...
T Consensus 85 ~~~v~l~v~R~~~ 97 (108)
T 3cbz_A 85 PGPIVLTVAKSGG 97 (108)
T ss_dssp SSCEEEEEECCCC
T ss_pred CCeEEEEEEeCCC
Confidence 5679999998643
No 100
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.26 E-value=1.5e-11 Score=107.91 Aligned_cols=86 Identities=26% Similarity=0.478 Sum_probs=74.3
Q ss_pred ceEEEeccC-CceeEEEEc---c-----CCCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCC
Q psy9827 51 PRFITFQKE-GSVGIRLTG---G-----NKVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQ 120 (627)
Q Consensus 51 ~r~v~l~k~-g~lG~~i~g---~-----~~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g 120 (627)
...+.+.+. .+|||++.+ + ...|++|..|.++|||+++| |++||+|++|||.++.++++.++...++..+
T Consensus 5 ~~~v~l~k~~~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 84 (113)
T 2g5m_B 5 LFPVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNTK 84 (113)
T ss_dssp EEEEECCCCSSCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHHSC
T ss_pred EEEEEEEeCCCCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCC
Confidence 345667665 489999998 2 24689999999999999999 9999999999999999999999999998889
Q ss_pred CeeEEEEEeCCcccce
Q psy9827 121 DQIHLIVQNRRDEYEH 136 (627)
Q Consensus 121 ~~V~L~v~r~~~~~~~ 136 (627)
+.+.|+|.|++.....
T Consensus 85 ~~v~l~v~R~~~~~~~ 100 (113)
T 2g5m_B 85 GRVRFMIGRERPGEQS 100 (113)
T ss_dssp SSCEEEEEECCCCTTS
T ss_pred CeEEEEEEeCCCCCcc
Confidence 9999999997765443
No 101
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.26 E-value=1.3e-11 Score=110.79 Aligned_cols=85 Identities=28% Similarity=0.485 Sum_probs=74.6
Q ss_pred CCceEEEeccC--CceeEEEEccCC-----CCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCC-CCCHHHHHHHHhcC
Q psy9827 49 PDPRFITFQKE--GSVGIRLTGGNK-----VGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMK-GITREEAVLFLLSL 119 (627)
Q Consensus 49 ~~~r~v~l~k~--g~lG~~i~g~~~-----~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~-~~~~~~~~~~l~~~ 119 (627)
...+.|.+.+. ++|||++.++.+ .|++|..|.++|||+++| |++||+|++|||.++. ++++.+++.+++..
T Consensus 24 ~~~~~v~l~k~~~~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~~ 103 (128)
T 2db5_A 24 RQIEYIDIERPSTGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQT 103 (128)
T ss_dssp CEEEEEEEECCSSSCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHHC
T ss_pred CceEEEEEEECCCCccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcC
Confidence 35567788776 489999988643 389999999999999999 9999999999999997 99999999999988
Q ss_pred CCeeEEEEEeCCcc
Q psy9827 120 QDQIHLIVQNRRDE 133 (627)
Q Consensus 120 g~~V~L~v~r~~~~ 133 (627)
+..|.|+|.|+...
T Consensus 104 ~~~v~l~v~r~~~~ 117 (128)
T 2db5_A 104 TGSLRLIVAREPVH 117 (128)
T ss_dssp CSEEEEEEEECCCS
T ss_pred CCeEEEEEEcCCCC
Confidence 99999999987543
No 102
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.26 E-value=3.3e-11 Score=107.37 Aligned_cols=92 Identities=33% Similarity=0.584 Sum_probs=72.6
Q ss_pred CCCccccccCCCCceEEEeccC--CceeEEEEccC-----------CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEe
Q psy9827 38 SPDLFSIFFVEPDPRFITFQKE--GSVGIRLTGGN-----------KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMD 103 (627)
Q Consensus 38 ~~d~~~~~~~~~~~r~v~l~k~--g~lG~~i~g~~-----------~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~ 103 (627)
..|.|+.|+ .++.+.+.+. ++|||++.++. ..|++|..|.++|||+++| |++||+|++|||.+
T Consensus 15 ~~d~~s~~~---~p~~v~l~k~~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~ 91 (123)
T 2iwq_A 15 TENLYFQSM---QPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMD 91 (123)
T ss_dssp --------C---CCEEEEECCCTTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEE
T ss_pred cccCCcccC---CCEEEEEEecCCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEE
Confidence 345666553 4577887764 58999998753 2589999999999999999 99999999999999
Q ss_pred CCCCCHHHHHHHHhcCCCeeEEEEEeCCc
Q psy9827 104 MKGITREEAVLFLLSLQDQIHLIVQNRRD 132 (627)
Q Consensus 104 v~~~~~~~~~~~l~~~g~~V~L~v~r~~~ 132 (627)
+.+++..++...++..+..+.|+|.|.++
T Consensus 92 v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 120 (123)
T 2iwq_A 92 LRDASHEQAVEAIRKAGNPVVFMVQSIIS 120 (123)
T ss_dssp CTTCCHHHHHHHHHHCCSSEEEEEECCCC
T ss_pred CCCCCHHHHHHHHHcCCCeEEEEEEECCc
Confidence 99999999999998778899999997553
No 103
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.26 E-value=3.8e-11 Score=104.59 Aligned_cols=81 Identities=20% Similarity=0.285 Sum_probs=71.0
Q ss_pred CceEEEeccC--CceeEEEEccCCC--------------CEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHH
Q psy9827 50 DPRFITFQKE--GSVGIRLTGGNKV--------------GIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAV 113 (627)
Q Consensus 50 ~~r~v~l~k~--g~lG~~i~g~~~~--------------gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~ 113 (627)
..+.+.+.+. ++|||++.++... |++|..|.++|||+++||++||+|++|||.++.++++.++.
T Consensus 7 ~~~~v~l~~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~ 86 (109)
T 1q3o_A 7 KEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVV 86 (109)
T ss_dssp EEEEEEEECCTTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHH
T ss_pred CcEEEEEEECCCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH
Confidence 4577777653 5899999987542 79999999999999999999999999999999999999999
Q ss_pred HHHhcCCCeeEEEEEeC
Q psy9827 114 LFLLSLQDQIHLIVQNR 130 (627)
Q Consensus 114 ~~l~~~g~~V~L~v~r~ 130 (627)
..++..+..+.|+|.+.
T Consensus 87 ~~l~~~~~~v~l~v~~~ 103 (109)
T 1q3o_A 87 NMIRQGGNTLMVKVVMV 103 (109)
T ss_dssp HHHHHTTTEEEEEEEEE
T ss_pred HHHHhCCCEEEEEEEEC
Confidence 88887788999998864
No 104
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.26 E-value=2.8e-11 Score=105.21 Aligned_cols=81 Identities=32% Similarity=0.642 Sum_probs=69.5
Q ss_pred eEEEec--cC-CceeEEEEccC-------CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCC
Q psy9827 52 RFITFQ--KE-GSVGIRLTGGN-------KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQ 120 (627)
Q Consensus 52 r~v~l~--k~-g~lG~~i~g~~-------~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g 120 (627)
..+.+. +. ++|||++.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++...++..+
T Consensus 14 ~~v~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g 93 (108)
T 2jre_A 14 YSVELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLRNAG 93 (108)
T ss_dssp EEEEEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHHHHHC
T ss_pred EEEEEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 445563 33 48999999862 3589999999999999999 9999999999999999999999888888788
Q ss_pred CeeEEEEEeCCc
Q psy9827 121 DQIHLIVQNRRD 132 (627)
Q Consensus 121 ~~V~L~v~r~~~ 132 (627)
..|.|+|.|++.
T Consensus 94 ~~v~l~v~R~~~ 105 (108)
T 2jre_A 94 NPVRLLLIRRLP 105 (108)
T ss_dssp SEEEEEEEECCC
T ss_pred CeEEEEEEeCCc
Confidence 999999998664
No 105
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.26 E-value=2.2e-11 Score=103.63 Aligned_cols=80 Identities=26% Similarity=0.321 Sum_probs=70.6
Q ss_pred CceEEEeccC--CceeEEEEccCCCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEE
Q psy9827 50 DPRFITFQKE--GSVGIRLTGGNKVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLI 126 (627)
Q Consensus 50 ~~r~v~l~k~--g~lG~~i~g~~~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~ 126 (627)
.++.+.+.|. ++||+++....+.|++|..|.++|||+++| |++||+|++|||.++.+++..++...++..++.++|+
T Consensus 12 ~~~~v~l~K~~~~~lG~~l~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~v~L~ 91 (97)
T 2ejy_A 12 MVRLIQFEKVTEEPMGICLKLNEKQSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKETKGMISLK 91 (97)
T ss_dssp -CEEEEEEECSSSCCSEEEEECTTCCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHCCEEEEEE
T ss_pred ccEEEEEEeCCCCCeeEEEEeCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 5678888774 489999997656799999999999999999 9999999999999999988889888888778899998
Q ss_pred EEe
Q psy9827 127 VQN 129 (627)
Q Consensus 127 v~r 129 (627)
|.+
T Consensus 92 V~~ 94 (97)
T 2ejy_A 92 VIP 94 (97)
T ss_dssp EEC
T ss_pred EEE
Confidence 885
No 106
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.26 E-value=4.2e-11 Score=103.11 Aligned_cols=83 Identities=35% Similarity=0.622 Sum_probs=71.0
Q ss_pred CceEEEeccC--CceeEEEEccCC-----------CCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHH
Q psy9827 50 DPRFITFQKE--GSVGIRLTGGNK-----------VGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLF 115 (627)
Q Consensus 50 ~~r~v~l~k~--g~lG~~i~g~~~-----------~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~ 115 (627)
+++.+.+.+. ++|||++.++.+ .|++|..|.++|||+++| |++||+|++|||.++.++++.++...
T Consensus 4 dp~~v~l~~~~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~ 83 (103)
T 2fcf_A 4 QPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEA 83 (103)
T ss_dssp SCEEEEECCCC-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CCEEEEEEeCCCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 4677777764 589999988643 589999999999999999 99999999999999999999999999
Q ss_pred HhcCCCeeEEEEEeCCc
Q psy9827 116 LLSLQDQIHLIVQNRRD 132 (627)
Q Consensus 116 l~~~g~~V~L~v~r~~~ 132 (627)
++..++.+.|+|.|.+.
T Consensus 84 l~~~~~~v~l~v~r~~~ 100 (103)
T 2fcf_A 84 IRKAGNPVVFMVQSIIS 100 (103)
T ss_dssp HHTCCSSEEEEEECCCC
T ss_pred HHhCCCcEEEEEEECCC
Confidence 98777799999998553
No 107
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.25 E-value=1.1e-11 Score=109.45 Aligned_cols=85 Identities=28% Similarity=0.485 Sum_probs=75.7
Q ss_pred CCceEEEeccC--CceeEEEEccC-----CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCC-CCCHHHHHHHHhcC
Q psy9827 49 PDPRFITFQKE--GSVGIRLTGGN-----KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMK-GITREEAVLFLLSL 119 (627)
Q Consensus 49 ~~~r~v~l~k~--g~lG~~i~g~~-----~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~-~~~~~~~~~~l~~~ 119 (627)
..++.+.+.+. ++|||++.++. ..|++|..|.++|||+++| |++||+|++|||.++. ++++.++...++..
T Consensus 19 ~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~~ 98 (117)
T 2o2t_A 19 RHVEVFELLKPPSGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQKA 98 (117)
T ss_dssp SCEEEEEEECCSSSCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHHC
T ss_pred CeEEEEEEEECCCCCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcC
Confidence 46788888886 58999999864 3589999999999999999 9999999999999998 99999999999888
Q ss_pred CCeeEEEEEeCCcc
Q psy9827 120 QDQIHLIVQNRRDE 133 (627)
Q Consensus 120 g~~V~L~v~r~~~~ 133 (627)
++.|.|+|.|++..
T Consensus 99 ~~~v~l~v~R~~~~ 112 (117)
T 2o2t_A 99 KDTVQLVIARGSLP 112 (117)
T ss_dssp CSEEEEEEESSCCG
T ss_pred CCEEEEEEEeCCcc
Confidence 99999999987654
No 108
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.25 E-value=1.3e-11 Score=106.94 Aligned_cols=86 Identities=23% Similarity=0.412 Sum_probs=75.7
Q ss_pred CCCCceEEEeccC-CceeEEEEccC-CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeE
Q psy9827 47 VEPDPRFITFQKE-GSVGIRLTGGN-KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIH 124 (627)
Q Consensus 47 ~~~~~r~v~l~k~-g~lG~~i~g~~-~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~ 124 (627)
+.+.+|.+.+.|. ++|||++.+.. ..|++|..|.++|||+++||++||+|++|||.++.++++.++...++..++.+.
T Consensus 5 ~~~~~r~v~l~k~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~ 84 (106)
T 2eei_A 5 SSGQPRLCYLVKEGGSYGFSLKTVQGKKGVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASHEEVVEKVKKSGSRVM 84 (106)
T ss_dssp CCSSSEEEEEECCSSSCSCCEECCSSCCSCEECCCCTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHHHCSEEE
T ss_pred CCCCCEEEEEEECCCCCCEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 3568899999886 48999998764 468999999999999999999999999999999999999999888887788999
Q ss_pred EEEEeCCc
Q psy9827 125 LIVQNRRD 132 (627)
Q Consensus 125 L~v~r~~~ 132 (627)
|++.|...
T Consensus 85 l~v~r~~~ 92 (106)
T 2eei_A 85 FLLVDKET 92 (106)
T ss_dssp EEECCTTT
T ss_pred EEEEcCch
Confidence 99987553
No 109
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.24 E-value=5.2e-11 Score=101.24 Aligned_cols=80 Identities=19% Similarity=0.333 Sum_probs=69.4
Q ss_pred ceEEEecc-C-CceeEEEEccCCCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEE
Q psy9827 51 PRFITFQK-E-GSVGIRLTGGNKVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIV 127 (627)
Q Consensus 51 ~r~v~l~k-~-g~lG~~i~g~~~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v 127 (627)
...+.+.+ . .+|||++.+ ...|++|..|.+||||+++| |++||+|++|||.++.++++.++...++..+..|.|+|
T Consensus 9 ~~~v~l~~~~~~glG~~~~~-~~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~~~~v~l~v 87 (96)
T 2qkv_A 9 KFNVDLMKKAGKELGLSLSP-NEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKGANGKVSMEV 87 (96)
T ss_dssp CEEEEEECBTTBCCCEEEEE-CSSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEE
T ss_pred eEEEEEEeCCCCCccEEEEe-CCCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEEEEE
Confidence 34556654 3 489999887 35689999999999999999 99999999999999999999999999998888999999
Q ss_pred EeCC
Q psy9827 128 QNRR 131 (627)
Q Consensus 128 ~r~~ 131 (627)
.|..
T Consensus 88 ~R~~ 91 (96)
T 2qkv_A 88 TRPK 91 (96)
T ss_dssp ECCC
T ss_pred EeCC
Confidence 9854
No 110
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.24 E-value=2.7e-11 Score=108.11 Aligned_cols=85 Identities=24% Similarity=0.547 Sum_probs=74.7
Q ss_pred CceEEEeccC-CceeEEEEccCC---CCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeE
Q psy9827 50 DPRFITFQKE-GSVGIRLTGGNK---VGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIH 124 (627)
Q Consensus 50 ~~r~v~l~k~-g~lG~~i~g~~~---~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~ 124 (627)
..+.+.+.+. ++|||++.++.+ .|++|..|.++|||+++| |++||+|++|||.++.++++.+++..++..+..|.
T Consensus 25 ~~~~v~l~k~~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~v~ 104 (124)
T 2daz_A 25 ELHIIELEKDKNGLGLSLAGNKDRSRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTAPSKVK 104 (124)
T ss_dssp EEEEEEEECCSSCCCEEEECBSSTTSCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHSCSEEE
T ss_pred ceEEEEEEeCCCccCEEEeccCCCCcCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 4466777776 489999998743 589999999999999999 99999999999999999999999998988888999
Q ss_pred EEEEeCCccc
Q psy9827 125 LIVQNRRDEY 134 (627)
Q Consensus 125 L~v~r~~~~~ 134 (627)
|+|.|+...+
T Consensus 105 l~v~R~~~~~ 114 (124)
T 2daz_A 105 LVFIRNEDAV 114 (124)
T ss_dssp EEEEECTTHH
T ss_pred EEEEeCCCcc
Confidence 9999876543
No 111
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.24 E-value=8.7e-11 Score=104.66 Aligned_cols=81 Identities=25% Similarity=0.424 Sum_probs=70.8
Q ss_pred eEEEeccC-CceeEEEEccC--CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhc--CCCeeEE
Q psy9827 52 RFITFQKE-GSVGIRLTGGN--KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLS--LQDQIHL 125 (627)
Q Consensus 52 r~v~l~k~-g~lG~~i~g~~--~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~--~g~~V~L 125 (627)
..+.+.+. .+|||++.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++..+++. .+..|.|
T Consensus 21 ~~v~l~~~~~glG~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l 100 (123)
T 1ueq_A 21 LSTTLKKSNMGFGFTIIGGDEPDEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPIGQSVNL 100 (123)
T ss_dssp EEEEEECCTTSCSEEEECCSSSSCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEE
T ss_pred EEEEEEeCCCceeEEEecccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEE
Confidence 44666665 48999999864 4579999999999999999 99999999999999999999999998886 5799999
Q ss_pred EEEeCCc
Q psy9827 126 IVQNRRD 132 (627)
Q Consensus 126 ~v~r~~~ 132 (627)
+|.|+..
T Consensus 101 ~v~R~~~ 107 (123)
T 1ueq_A 101 VLCRGYP 107 (123)
T ss_dssp EEEESCC
T ss_pred EEEeCCC
Confidence 9998653
No 112
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.24 E-value=5.5e-11 Score=98.53 Aligned_cols=77 Identities=25% Similarity=0.423 Sum_probs=66.1
Q ss_pred EEEeccC-CceeEEEEccC--CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcC--CCeeEEE
Q psy9827 53 FITFQKE-GSVGIRLTGGN--KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSL--QDQIHLI 126 (627)
Q Consensus 53 ~v~l~k~-g~lG~~i~g~~--~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~--g~~V~L~ 126 (627)
.+.+.+. .+|||++.++. ..+++|..|.++|||+++| |++||+|++|||.++.++++.++...++.. ++.+.|+
T Consensus 3 ~v~l~k~~~g~G~~i~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~ 82 (85)
T 2i04_A 3 HTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLE 82 (85)
T ss_dssp EEEEECBTTBSSEEEEECCSTTBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCEEEEE
T ss_pred EEEEEECCCCCCEEEEcccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEE
Confidence 4556665 48999999853 3579999999999999999 999999999999999999999988888754 7899998
Q ss_pred EEe
Q psy9827 127 VQN 129 (627)
Q Consensus 127 v~r 129 (627)
|.|
T Consensus 83 v~R 85 (85)
T 2i04_A 83 LCR 85 (85)
T ss_dssp EEC
T ss_pred EEC
Confidence 864
No 113
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.24 E-value=3.6e-11 Score=104.28 Aligned_cols=82 Identities=23% Similarity=0.424 Sum_probs=72.6
Q ss_pred CceEEEeccC--CceeEEEEccCC--------CCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC
Q psy9827 50 DPRFITFQKE--GSVGIRLTGGNK--------VGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSL 119 (627)
Q Consensus 50 ~~r~v~l~k~--g~lG~~i~g~~~--------~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~ 119 (627)
+++.+.+.+. ++|||++.++.+ .|++|..|.++|||+ +||++||+|++|||.++.++++.++...+...
T Consensus 7 ~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 85 (107)
T 2h2b_A 7 EQHTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQLQENDRVAMVNGVSMDNVEHAFAVQQLRKS 85 (107)
T ss_dssp EEEEEEEECBTTTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TTBCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred eeEEEEEEeCCCCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hCCCCCCEEEEECCEECCCccHHHHHHHhhCC
Confidence 5677888876 489999998643 489999999999999 99999999999999999999999988888888
Q ss_pred CCeeEEEEEeCCc
Q psy9827 120 QDQIHLIVQNRRD 132 (627)
Q Consensus 120 g~~V~L~v~r~~~ 132 (627)
++.+.|+|.|++.
T Consensus 86 g~~v~l~v~R~~~ 98 (107)
T 2h2b_A 86 GKNAKITIRRKKG 98 (107)
T ss_dssp CSEEEEEEEEESC
T ss_pred CCEEEEEEEECCC
Confidence 9999999998654
No 114
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=99.24 E-value=2.4e-11 Score=104.69 Aligned_cols=81 Identities=37% Similarity=0.587 Sum_probs=72.2
Q ss_pred CceEEEeccCCceeEEEEccC----------CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC
Q psy9827 50 DPRFITFQKEGSVGIRLTGGN----------KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSL 119 (627)
Q Consensus 50 ~~r~v~l~k~g~lG~~i~g~~----------~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~ 119 (627)
....+.+.+.++|||++.++. ..|++|..|.++|||++ ||++||+|++|||.++.++++.++...++..
T Consensus 11 ~~~~v~l~~~~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 89 (103)
T 1n7t_A 11 QEIRVRVEKDPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKTF 89 (103)
T ss_dssp CCEEEEEECSSCCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-SCCTTCEEEEETTEECSSCCHHHHHHHHHHC
T ss_pred EEEEEEEccCCCccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-CCCCCCEEEEECCEECCCCCHHHHHHHhhcC
Confidence 445677888889999999853 45899999999999999 9999999999999999999999999988888
Q ss_pred CCeeEEEEEeCC
Q psy9827 120 QDQIHLIVQNRR 131 (627)
Q Consensus 120 g~~V~L~v~r~~ 131 (627)
++.+.|+|.|+.
T Consensus 90 g~~v~l~v~R~~ 101 (103)
T 1n7t_A 90 QNTVELIIVREV 101 (103)
T ss_dssp CSEEEEEEECCC
T ss_pred CCeEEEEEEecC
Confidence 999999999754
No 115
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.23 E-value=3.3e-11 Score=103.91 Aligned_cols=82 Identities=34% Similarity=0.559 Sum_probs=71.7
Q ss_pred CceEEEeccC--CceeEEEEccCC--CCEEEEEeCCCChhhhc-CCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeE
Q psy9827 50 DPRFITFQKE--GSVGIRLTGGNK--VGIFVTAVQPGSPASLQ-GLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIH 124 (627)
Q Consensus 50 ~~r~v~l~k~--g~lG~~i~g~~~--~gi~V~~V~~gspA~~a-GL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~ 124 (627)
..+.+.+.+. ++|||++.++.+ .+++|..|.++|||+++ ||++||+|++|||.++.++++.++...++..++.++
T Consensus 9 ~~~~v~l~~~~~~~lG~~l~~g~~~~~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~v~ 88 (103)
T 2dc2_A 9 PIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIE 88 (103)
T ss_dssp CEEEEEEECCSSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHHCCSEEE
T ss_pred CcEEEEEEeCCCCccCEEEEeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEE
Confidence 4567777664 489999998743 47999999999999995 999999999999999999999999999998888999
Q ss_pred EEEEeCC
Q psy9827 125 LIVQNRR 131 (627)
Q Consensus 125 L~v~r~~ 131 (627)
|++.+..
T Consensus 89 l~v~~~~ 95 (103)
T 2dc2_A 89 FEVVYVA 95 (103)
T ss_dssp EEEEECC
T ss_pred EEEEecC
Confidence 9998744
No 116
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.23 E-value=2.2e-11 Score=105.94 Aligned_cols=85 Identities=33% Similarity=0.545 Sum_probs=74.1
Q ss_pred CCceEEEeccC-CceeEEEE-----ccC-----CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHH
Q psy9827 49 PDPRFITFQKE-GSVGIRLT-----GGN-----KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFL 116 (627)
Q Consensus 49 ~~~r~v~l~k~-g~lG~~i~-----g~~-----~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l 116 (627)
.+.+.+.+.+. .+|||++. ++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++...+
T Consensus 8 ~~~~~v~l~k~~~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~ 87 (108)
T 1q7x_A 8 GDIFEVELAKNDNSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETL 87 (108)
T ss_dssp SSEEEEEEESSSCSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHHH
T ss_pred CcEEEEEEEECCCCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 35677788776 48999999 642 3689999999999999999 999999999999999999999999988
Q ss_pred hcCCCeeEEEEEeCCcc
Q psy9827 117 LSLQDQIHLIVQNRRDE 133 (627)
Q Consensus 117 ~~~g~~V~L~v~r~~~~ 133 (627)
+..++.+.|+|.|+...
T Consensus 88 ~~~g~~v~l~v~R~~~~ 104 (108)
T 1q7x_A 88 RNTGQVVHLLLEKGQSP 104 (108)
T ss_dssp HHTTSEEEEEEECCCCS
T ss_pred HcCCCeEEEEEEeCCcc
Confidence 88899999999986643
No 117
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.23 E-value=5.3e-11 Score=102.67 Aligned_cols=83 Identities=24% Similarity=0.395 Sum_probs=72.8
Q ss_pred CceEEEeccC-CceeEEEEccC----CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCee
Q psy9827 50 DPRFITFQKE-GSVGIRLTGGN----KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQDQI 123 (627)
Q Consensus 50 ~~r~v~l~k~-g~lG~~i~g~~----~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V 123 (627)
..+.+.+.+. .+|||++.++. ..+++|..|.++|||+++| |++||+|++|||.++.++++.++...++..+..|
T Consensus 11 ~~~~v~l~~~~~g~G~~l~~~~~~~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v 90 (104)
T 2djt_A 11 GHFSVELVRGYAGFGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAGGPQL 90 (104)
T ss_dssp CCEEEEEECCSSSCCEEEECCEETTEECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHHTCSEE
T ss_pred ceEEEEEEeCCCCccEEEEeccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 5567777775 58999999853 4689999999999999999 9999999999999999999999888888788999
Q ss_pred EEEEEeCCc
Q psy9827 124 HLIVQNRRD 132 (627)
Q Consensus 124 ~L~v~r~~~ 132 (627)
.|+|.|+..
T Consensus 91 ~l~v~R~g~ 99 (104)
T 2djt_A 91 HLVIRRPLS 99 (104)
T ss_dssp EEEECCCCC
T ss_pred EEEEEECCC
Confidence 999987653
No 118
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.22 E-value=7.3e-11 Score=101.32 Aligned_cols=85 Identities=16% Similarity=0.250 Sum_probs=72.2
Q ss_pred CCCCceEEEeccC--CceeEEEEccCCC----CEEEEEeCCCChhhh-cCCCCCCEEEEECCEeCCCCCHHHHHHHHhc-
Q psy9827 47 VEPDPRFITFQKE--GSVGIRLTGGNKV----GIFVTAVQPGSPASL-QGLQPGDKILKVNDMDMKGITREEAVLFLLS- 118 (627)
Q Consensus 47 ~~~~~r~v~l~k~--g~lG~~i~g~~~~----gi~V~~V~~gspA~~-aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~- 118 (627)
.....+.+.+.+. ++|||++.+.... +++|..|.+||||++ +||++||+|++|||.++.+.++.++..+++.
T Consensus 6 ~~~~~~~v~l~k~~g~~lG~~i~~~~~~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~ 85 (101)
T 2yt7_A 6 SGDNCREVHLEKRRGEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRET 85 (101)
T ss_dssp TTCCCEEEEEECCTTCCCCEEEEECCCSSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHT
T ss_pred CCCceEEEEEEeCCCCccCEEEEeCCCCCCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 4457788888764 4899999864322 699999999999999 5599999999999999999999999998886
Q ss_pred -CCCeeEEEEEeCC
Q psy9827 119 -LQDQIHLIVQNRR 131 (627)
Q Consensus 119 -~g~~V~L~v~r~~ 131 (627)
.++.|+|+|.|.+
T Consensus 86 ~~g~~v~l~v~R~~ 99 (101)
T 2yt7_A 86 KSQTSVTLSIVHCP 99 (101)
T ss_dssp TTSSEEEEEECCCC
T ss_pred CCCCeEEEEEEeCC
Confidence 7899999998755
No 119
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.22 E-value=5.1e-11 Score=103.31 Aligned_cols=81 Identities=28% Similarity=0.568 Sum_probs=71.3
Q ss_pred CCceEEEeccC--CceeEEEEccCC--CCEEEEEeCCCChhhhcC--CCCCCEEEEECCEeCCCCCHHHHHHHHhcCCC-
Q psy9827 49 PDPRFITFQKE--GSVGIRLTGGNK--VGIFVTAVQPGSPASLQG--LQPGDKILKVNDMDMKGITREEAVLFLLSLQD- 121 (627)
Q Consensus 49 ~~~r~v~l~k~--g~lG~~i~g~~~--~gi~V~~V~~gspA~~aG--L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~- 121 (627)
...+.+.+.+. ++|||++.++.+ .+++|..|.++|||+++| |++||+|++|||.++.++++.++...++..++
T Consensus 16 ~~~~~v~l~~~~~~~~G~~~~gg~~~~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~ 95 (107)
T 3nfk_A 16 DNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCER 95 (107)
T ss_dssp CCCEEEEECCCTTSCCCEEEEEEGGGTEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGGGS
T ss_pred CCEEEEEEEcCCCCCCCEEEEccCCCCCCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhcccc
Confidence 45678888875 489999998643 479999999999999999 99999999999999999999999999987764
Q ss_pred ---eeEEEEEe
Q psy9827 122 ---QIHLIVQN 129 (627)
Q Consensus 122 ---~V~L~v~r 129 (627)
.|.|+|.|
T Consensus 96 ~~~~v~l~v~r 106 (107)
T 3nfk_A 96 HSGELMLLVRP 106 (107)
T ss_dssp BTTBEEEEEEC
T ss_pred CCcEEEEEEEc
Confidence 89999886
No 120
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.22 E-value=7.4e-11 Score=104.17 Aligned_cols=84 Identities=26% Similarity=0.428 Sum_probs=74.7
Q ss_pred CCceEEEeccC--CceeEEEEccCC---CCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCe
Q psy9827 49 PDPRFITFQKE--GSVGIRLTGGNK---VGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQDQ 122 (627)
Q Consensus 49 ~~~r~v~l~k~--g~lG~~i~g~~~---~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~ 122 (627)
..++.+.+.+. .+|||++.++.+ .+++|..|.+||||+++| |++||+|++|||.++.+.++.++..+++..+..
T Consensus 14 ~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~ 93 (117)
T 1v62_A 14 SGPLMVEIVKTPGSALGISLTTTSLRNKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLASISEK 93 (117)
T ss_dssp SSSEEEEEECCTTCCCCCEEEEECCSSSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHSCSSE
T ss_pred CCcEEEEEEcCCCCcccEEEEccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 46788888885 489999998633 359999999999999999 999999999999999999999999999988999
Q ss_pred eEEEEEeCCc
Q psy9827 123 IHLIVQNRRD 132 (627)
Q Consensus 123 V~L~v~r~~~ 132 (627)
|.|+|.|...
T Consensus 94 v~l~v~r~~~ 103 (117)
T 1v62_A 94 VRLEILPVPQ 103 (117)
T ss_dssp EEEEECCBTT
T ss_pred EEEEEEECCC
Confidence 9999998654
No 121
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.22 E-value=2.2e-11 Score=107.50 Aligned_cols=83 Identities=29% Similarity=0.448 Sum_probs=72.2
Q ss_pred CceEEEeccC--CceeEEEEccC--------CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC
Q psy9827 50 DPRFITFQKE--GSVGIRLTGGN--------KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSL 119 (627)
Q Consensus 50 ~~r~v~l~k~--g~lG~~i~g~~--------~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~ 119 (627)
+.+.+.+.+. ++|||++.++. ..|++|..|.++|||+ +||++||+|++|||.++.++++.+++..++..
T Consensus 14 ~~~~v~l~k~~~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~gL~~GD~I~~Vng~~v~~~~~~~~~~~l~~~ 92 (117)
T 2csj_A 14 EQYTVTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GLLQENDRVVMVNGTPMEDVLHSFAVQQLRKS 92 (117)
T ss_dssp EEEEEEEECCSSSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HHBCTTCEEEEESSCBCBTCCHHHHHHHHHHS
T ss_pred eEEEEEEEECCCCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-ccCCCCCEEEEECCEECCCcCHHHHHHHHhcC
Confidence 4566777775 48999999874 3579999999999997 89999999999999999999999999999888
Q ss_pred CCeeEEEEEeCCcc
Q psy9827 120 QDQIHLIVQNRRDE 133 (627)
Q Consensus 120 g~~V~L~v~r~~~~ 133 (627)
++.|.|+|.|....
T Consensus 93 ~~~v~l~v~R~~~~ 106 (117)
T 2csj_A 93 GKIAAIVVKRPRKV 106 (117)
T ss_dssp CSEEEEEEEEEEEC
T ss_pred CCeEEEEEEECCcc
Confidence 99999999986543
No 122
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.21 E-value=5.9e-11 Score=104.26 Aligned_cols=84 Identities=18% Similarity=0.276 Sum_probs=73.4
Q ss_pred CCceEEEeccC--CceeEEEEccCC---------CCEEEEEeCCCChhhh-cCCCCCCEEEEECCEeCCCCCHHHHHHHH
Q psy9827 49 PDPRFITFQKE--GSVGIRLTGGNK---------VGIFVTAVQPGSPASL-QGLQPGDKILKVNDMDMKGITREEAVLFL 116 (627)
Q Consensus 49 ~~~r~v~l~k~--g~lG~~i~g~~~---------~gi~V~~V~~gspA~~-aGL~~GD~Il~VnG~~v~~~~~~~~~~~l 116 (627)
+.++.|.+.+. ++|||+|.++.+ .+++|..|.++|||++ +||++||+|++|||.++.++++.++..++
T Consensus 9 ~~~~~v~l~~~~~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~~~~~~~~~~l 88 (114)
T 1uew_A 9 LQTSDVVIHRKENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKLI 88 (114)
T ss_dssp CCCEEEEEECCTTSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSCHHHHHHHH
T ss_pred ccceEEEEEECCCCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 57788888774 489999988631 1579999999999999 99999999999999999999999999988
Q ss_pred hcCCCeeEEEEEeCCc
Q psy9827 117 LSLQDQIHLIVQNRRD 132 (627)
Q Consensus 117 ~~~g~~V~L~v~r~~~ 132 (627)
+..+..|.|+|.|...
T Consensus 89 ~~~g~~v~l~v~r~~~ 104 (114)
T 1uew_A 89 KDAGLSVTLRIIPQEE 104 (114)
T ss_dssp HHTTTEEEEEECCCSC
T ss_pred HcCCCeEEEEEEeCCc
Confidence 8889999999998654
No 123
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.21 E-value=4.3e-11 Score=103.19 Aligned_cols=83 Identities=25% Similarity=0.424 Sum_probs=71.9
Q ss_pred CCceEEEeccC-CceeEEEEccCCC---CEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhc-----
Q psy9827 49 PDPRFITFQKE-GSVGIRLTGGNKV---GIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLS----- 118 (627)
Q Consensus 49 ~~~r~v~l~k~-g~lG~~i~g~~~~---gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~----- 118 (627)
+..+.|.+.+. .+|||+|.++.+. .++|..|.+++||+++| |++||+|++|||.++.++++.+++.+++.
T Consensus 5 ~~~~~v~l~k~~~glG~~i~gg~~~~~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~ 84 (103)
T 1ufx_A 5 SSGTLVRVKKSAATLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTK 84 (103)
T ss_dssp SSSEEEEEECCSSSCCEEEECBTTSSCSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHCS
T ss_pred CceEEEEEEcCCCcCCeEEECCCCCCCCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcccC
Confidence 45678888775 4899999987543 35999999999999999 99999999999999999999999998885
Q ss_pred CCCeeEEEEEeCC
Q psy9827 119 LQDQIHLIVQNRR 131 (627)
Q Consensus 119 ~g~~V~L~v~r~~ 131 (627)
.++.+.|+|.|..
T Consensus 85 ~~~~i~l~v~r~~ 97 (103)
T 1ufx_A 85 DRDYIDFLVTEFN 97 (103)
T ss_dssp SCSEEEEEECCCC
T ss_pred CCCeEEEEEEEcc
Confidence 5788999988754
No 124
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.21 E-value=5.1e-11 Score=103.13 Aligned_cols=81 Identities=23% Similarity=0.391 Sum_probs=71.8
Q ss_pred ceEEEeccC--CceeEEEEccC-CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEE
Q psy9827 51 PRFITFQKE--GSVGIRLTGGN-KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIV 127 (627)
Q Consensus 51 ~r~v~l~k~--g~lG~~i~g~~-~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v 127 (627)
+|.+.+.+. +++||.+.... ..|++|..|.+||||+++||++||+|++|||.++.++++.++...++..++.|.|+|
T Consensus 2 ~r~v~l~~~~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v 81 (106)
T 3ngh_A 2 PRESKLSKQEGQNYGFFLRIEKDTDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVTLLV 81 (106)
T ss_dssp CEEEEEECCTTCCCCCEEECCTTCCSCEEECCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHHHTTTEEEEEE
T ss_pred CEEEEEEeCCCCeeCEEEEEEeCCCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEE
Confidence 678888775 37999888764 358999999999999999999999999999999999999999888888899999999
Q ss_pred EeCC
Q psy9827 128 QNRR 131 (627)
Q Consensus 128 ~r~~ 131 (627)
.|..
T Consensus 82 ~r~~ 85 (106)
T 3ngh_A 82 LDGD 85 (106)
T ss_dssp ECHH
T ss_pred EECC
Confidence 9754
No 125
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.21 E-value=4.3e-11 Score=102.29 Aligned_cols=79 Identities=28% Similarity=0.377 Sum_probs=67.6
Q ss_pred EEeccC-CceeEEEEccCC---------CCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCee
Q psy9827 54 ITFQKE-GSVGIRLTGGNK---------VGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQI 123 (627)
Q Consensus 54 v~l~k~-g~lG~~i~g~~~---------~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V 123 (627)
+.+.+. ++|||++.+... .|++|..|.++|||+++||++||+|++|||.++.++++.++...++..++.+
T Consensus 6 v~l~~~~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v 85 (99)
T 3khf_A 6 IVIHSSGKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAGLRAGDLITHINGESVLGLVHMDVVELLLKSGNKI 85 (99)
T ss_dssp EEEEC-CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSEE
T ss_pred EEEEeCCCCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCEE
Confidence 445554 589999986521 2678999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCc
Q psy9827 124 HLIVQNRRD 132 (627)
Q Consensus 124 ~L~v~r~~~ 132 (627)
.|++.|...
T Consensus 86 ~l~v~r~~~ 94 (99)
T 3khf_A 86 SLRTTALEN 94 (99)
T ss_dssp EEEEECSCS
T ss_pred EEEEEECCC
Confidence 999998553
No 126
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.21 E-value=7.4e-11 Score=105.39 Aligned_cols=82 Identities=27% Similarity=0.507 Sum_probs=72.7
Q ss_pred CceEEEeccC--CceeEEEEccCC--CCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeE
Q psy9827 50 DPRFITFQKE--GSVGIRLTGGNK--VGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIH 124 (627)
Q Consensus 50 ~~r~v~l~k~--g~lG~~i~g~~~--~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~ 124 (627)
.++.+.+.+. ++|||++.++.+ .+++|..|.+||||+++| |++||+|++|||.++.++++.++...++..++.|+
T Consensus 19 ~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~v~ 98 (125)
T 3hpk_A 19 VPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVT 98 (125)
T ss_dssp EEEEEEEECCTTSCCCEEEEECSSCCSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSEEE
T ss_pred CCeEEEEEeCCCCCcCEEEeccCCCCCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 4577777774 589999998753 579999999999999999 99999999999999999999999999998888899
Q ss_pred EEEEeCC
Q psy9827 125 LIVQNRR 131 (627)
Q Consensus 125 L~v~r~~ 131 (627)
|+|.|.+
T Consensus 99 l~v~r~~ 105 (125)
T 3hpk_A 99 IHYNKLQ 105 (125)
T ss_dssp EEEEEEC
T ss_pred EEEEECC
Confidence 9998743
No 127
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.20 E-value=9.8e-11 Score=102.85 Aligned_cols=88 Identities=26% Similarity=0.507 Sum_probs=72.6
Q ss_pred cccccCCCCceEEEeccC--CceeEEEEccCC--CCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHH
Q psy9827 42 FSIFFVEPDPRFITFQKE--GSVGIRLTGGNK--VGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFL 116 (627)
Q Consensus 42 ~~~~~~~~~~r~v~l~k~--g~lG~~i~g~~~--~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l 116 (627)
...+|....++.+.+.+. ++|||++.++.+ .+++|..|.+||||+++| |++||+|++|||.++.+.+..++...+
T Consensus 16 ~~~~~q~~~~~~V~l~~~~~~~lG~~l~~~~~~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l 95 (114)
T 2gzv_A 16 ENLYFQSMVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMI 95 (114)
T ss_dssp ------CCCCEEEEEECCTTSCCSEEEEECCC--CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred cceeeccCCCEEEEEEECCCCcEeEEEEeCCCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 455677778999999875 469999998754 379999999999999999 999999999999999888999988888
Q ss_pred hcCCCeeEEEEEe
Q psy9827 117 LSLQDQIHLIVQN 129 (627)
Q Consensus 117 ~~~g~~V~L~v~r 129 (627)
+..++.+.|+|.+
T Consensus 96 ~~~~~~v~l~v~~ 108 (114)
T 2gzv_A 96 QEVKGEVTIHYNK 108 (114)
T ss_dssp HHCCSEEEEEEEC
T ss_pred HcCCCeEEEEEEe
Confidence 8777788888874
No 128
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.20 E-value=4.4e-11 Score=103.66 Aligned_cols=79 Identities=19% Similarity=0.342 Sum_probs=69.1
Q ss_pred eEEEeccC--CceeEEEEccCCCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEE
Q psy9827 52 RFITFQKE--GSVGIRLTGGNKVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQ 128 (627)
Q Consensus 52 r~v~l~k~--g~lG~~i~g~~~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~ 128 (627)
..+.|.+. .+|||++.+ ...|++|..|.+||||+++| |++||+|++|||.++.+.++.++...++..++.|.|+|.
T Consensus 4 ~~v~L~k~~~~glG~~i~~-~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~v~l~v~ 82 (106)
T 2la8_A 4 FNVDLMKKAGKELGLSLSP-NEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSMEVT 82 (106)
T ss_dssp EEEEECCBSSSTTCCEEEE-CSSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSCBSCEEEEEE
T ss_pred EEEEEEeCCCCccCEEEEe-CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEE
Confidence 34566543 489999887 45789999999999999999 999999999999999999999999999988889999999
Q ss_pred eCC
Q psy9827 129 NRR 131 (627)
Q Consensus 129 r~~ 131 (627)
|..
T Consensus 83 R~~ 85 (106)
T 2la8_A 83 RPK 85 (106)
T ss_dssp ECC
T ss_pred eCC
Confidence 854
No 129
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.20 E-value=6e-11 Score=99.81 Aligned_cols=81 Identities=19% Similarity=0.269 Sum_probs=71.1
Q ss_pred CCCceEEEeccC--CceeEEEEccCCCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeE
Q psy9827 48 EPDPRFITFQKE--GSVGIRLTGGNKVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIH 124 (627)
Q Consensus 48 ~~~~r~v~l~k~--g~lG~~i~g~~~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~ 124 (627)
.+..|.|.+.|. ++|||++.+. ..+++|..|.++|||+++| |++||+|++|||.++ +.++.++...++..++.+.
T Consensus 4 ~~~~r~v~l~k~~~~~lG~~i~~~-~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~~~~v~ 81 (91)
T 2e7k_A 4 GSSGRMVGIRKTAGEHLGVTFRVE-GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNASGSVI 81 (91)
T ss_dssp CCCSCBCCBCCCTTCCCCEEEEES-SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTCCSSBC
T ss_pred CCCcEEEEEEECCCCcEeEEEEec-CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcCCCeEE
Confidence 456788888764 4899999984 5689999999999999987 999999999999999 8899999999988888999
Q ss_pred EEEEeC
Q psy9827 125 LIVQNR 130 (627)
Q Consensus 125 L~v~r~ 130 (627)
|+|.+.
T Consensus 82 l~v~~~ 87 (91)
T 2e7k_A 82 LKILSG 87 (91)
T ss_dssp EEEECC
T ss_pred EEEEEC
Confidence 999864
No 130
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.20 E-value=6.9e-11 Score=107.63 Aligned_cols=87 Identities=32% Similarity=0.492 Sum_probs=71.8
Q ss_pred CCCceEEEeccCC-----ceeEEEEccC--------------CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCC
Q psy9827 48 EPDPRFITFQKEG-----SVGIRLTGGN--------------KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGIT 108 (627)
Q Consensus 48 ~~~~r~v~l~k~g-----~lG~~i~g~~--------------~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~ 108 (627)
.+..+.+.+.+.+ +|||++.++. ..|++|..|.+||||+++||++||+|++|||.++.+++
T Consensus 21 ~~~~~~v~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~ 100 (139)
T 2vz5_A 21 QSMVQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVT 100 (139)
T ss_dssp -CEEEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCC
T ss_pred CCceEEEEEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEEcCCCC
Confidence 3456777776642 7999998753 36899999999999999999999999999999999999
Q ss_pred HHHHHHHHhc-CCCeeEEEEEeCCccc
Q psy9827 109 REEAVLFLLS-LQDQIHLIVQNRRDEY 134 (627)
Q Consensus 109 ~~~~~~~l~~-~g~~V~L~v~r~~~~~ 134 (627)
+.++...++. .++.|.|+|.|++...
T Consensus 101 ~~~~~~~l~~~~g~~v~l~v~R~g~~~ 127 (139)
T 2vz5_A 101 HDQARKRLTKRSEEVVRLLVTRQSLQK 127 (139)
T ss_dssp HHHHHHHHCCTTCSEEEEEEEECC---
T ss_pred HHHHHHHHHhCCCCEEEEEEEECCEEE
Confidence 9999888885 6789999999876543
No 131
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.20 E-value=1.9e-11 Score=107.07 Aligned_cols=87 Identities=36% Similarity=0.659 Sum_probs=77.1
Q ss_pred CCCceEEEeccC-CceeEEEEccC-CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeE
Q psy9827 48 EPDPRFITFQKE-GSVGIRLTGGN-KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIH 124 (627)
Q Consensus 48 ~~~~r~v~l~k~-g~lG~~i~g~~-~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~ 124 (627)
.+.++.|.+.+. .+|||++.++. ..+++|..|.++|||+++| |++||+|++|||.++.++++.++...++..+..+.
T Consensus 13 ~~~~~~v~l~k~~~glG~~l~~~~~~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~~~~~v~ 92 (113)
T 1um7_A 13 AREPRKIILHKGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVT 92 (113)
T ss_dssp CCSEEEEEEECCSSCSSBCCBCCSTTCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHSCCSEEE
T ss_pred CCceEEEEEEECCCcccEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEE
Confidence 457888999886 48999998875 3689999999999999999 99999999999999999999999888888899999
Q ss_pred EEEEeCCccc
Q psy9827 125 LIVQNRRDEY 134 (627)
Q Consensus 125 L~v~r~~~~~ 134 (627)
|+|.|++..+
T Consensus 93 l~v~r~~~~~ 102 (113)
T 1um7_A 93 IVAQYRPEEY 102 (113)
T ss_dssp EEEECCHHHH
T ss_pred EEEEECcchh
Confidence 9999876544
No 132
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.20 E-value=9.3e-11 Score=100.42 Aligned_cols=83 Identities=34% Similarity=0.540 Sum_probs=71.0
Q ss_pred CCceEEEeccC--CceeEEEEccC--CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeE
Q psy9827 49 PDPRFITFQKE--GSVGIRLTGGN--KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIH 124 (627)
Q Consensus 49 ~~~r~v~l~k~--g~lG~~i~g~~--~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~ 124 (627)
+..+.+.+.+. ++|||++.+.. ..|++|..|.++|||+++||++||+|++|||.++.++++.++...++. +..+.
T Consensus 9 ~~~~~v~l~~~~~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~-~~~v~ 87 (100)
T 2eeh_A 9 DIIHSVRVEKSPAGRLGFSVRGGSEHGLGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTTMGSAVKVLTS-SSRLH 87 (100)
T ss_dssp CEECCEEECCCSSSSCSEEEECCTTTTCCEEEEEECTTSHHHHHTCCSSCEEEEETTEECSSCCHHHHHHHHHS-CSSEE
T ss_pred CeEEEEEEEECCCCCccEEEEccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhcC-CCEEE
Confidence 34566778775 46999999874 368999999999999999999999999999999999997777777766 78999
Q ss_pred EEEEeCCc
Q psy9827 125 LIVQNRRD 132 (627)
Q Consensus 125 L~v~r~~~ 132 (627)
|+|.|++.
T Consensus 88 l~v~R~g~ 95 (100)
T 2eeh_A 88 MMVRRMGS 95 (100)
T ss_dssp EEEEECSC
T ss_pred EEEEECCc
Confidence 99998654
No 133
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.20 E-value=6.2e-11 Score=111.57 Aligned_cols=78 Identities=27% Similarity=0.541 Sum_probs=69.2
Q ss_pred EEEeccC-CceeEEEEc---c-----CCCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCe
Q psy9827 53 FITFQKE-GSVGIRLTG---G-----NKVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQDQ 122 (627)
Q Consensus 53 ~v~l~k~-g~lG~~i~g---~-----~~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~ 122 (627)
.+.+.+. ++|||+|.+ + ...|++|..|.+||||+++| |++||+|++|||.++.++++.+++.+++.++..
T Consensus 83 ~v~l~k~~~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~~g~~ 162 (170)
T 3egg_C 83 PVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNTKGR 162 (170)
T ss_dssp EEEEECBTTBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHHHCCSE
T ss_pred EEEEEeCCCeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCE
Confidence 4556665 589999998 2 23579999999999999999 999999999999999999999999999999999
Q ss_pred eEEEEEeC
Q psy9827 123 IHLIVQNR 130 (627)
Q Consensus 123 V~L~v~r~ 130 (627)
|.|+|.|.
T Consensus 163 v~L~V~R~ 170 (170)
T 3egg_C 163 VRFMIGRE 170 (170)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEeC
Confidence 99999873
No 134
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.19 E-value=1.2e-10 Score=102.02 Aligned_cols=82 Identities=16% Similarity=0.410 Sum_probs=72.6
Q ss_pred CceEEEeccC-C-ceeEEEEccCCCCEEEEEeCCCChhhhcCC-CCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEE
Q psy9827 50 DPRFITFQKE-G-SVGIRLTGGNKVGIFVTAVQPGSPASLQGL-QPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLI 126 (627)
Q Consensus 50 ~~r~v~l~k~-g-~lG~~i~g~~~~gi~V~~V~~gspA~~aGL-~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~ 126 (627)
..+.+.+.+. + +|||++.+. ..+++|..|.++|||+++|| ++||+|++|||.++.++++.++..+++..+..+.|+
T Consensus 25 ~~~~v~l~k~~~~~lG~~i~~~-~~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~ 103 (113)
T 1va8_A 25 TVKIVRIEKARDIPLGATVRNE-MDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTLTFV 103 (113)
T ss_dssp ECEEEEEEECTTCCCCEEEEEC-SSSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCEEEEEE
T ss_pred ceEEEEEEeCCCCceeEEEEeC-CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 5677888775 3 799999877 56899999999999999998 999999999999999999999999998777899999
Q ss_pred EEeCCc
Q psy9827 127 VQNRRD 132 (627)
Q Consensus 127 v~r~~~ 132 (627)
|.|...
T Consensus 104 v~r~~~ 109 (113)
T 1va8_A 104 LIPSSG 109 (113)
T ss_dssp EECCCC
T ss_pred EEECCc
Confidence 997654
No 135
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.19 E-value=9.8e-11 Score=103.65 Aligned_cols=85 Identities=28% Similarity=0.454 Sum_probs=70.2
Q ss_pred CCceEEEeccC--CceeEEEEccCC---CCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCCC-
Q psy9827 49 PDPRFITFQKE--GSVGIRLTGGNK---VGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQD- 121 (627)
Q Consensus 49 ~~~r~v~l~k~--g~lG~~i~g~~~---~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~- 121 (627)
+..+.+.+.+. ++|||++.++.+ .|++|..|.++|||+++| |++||+|++|||.++.++++.++...++..+.
T Consensus 14 ~~~~~v~l~~~~~~~lG~~i~g~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~ 93 (119)
T 1x6d_A 14 DGIHVTILHKEEGAGLGFSLAGGADLENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREP 93 (119)
T ss_dssp TTEEEEEEECCTTSCCSEEEECCSSSSCSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTTSS
T ss_pred CCeEEEEEEeCCCCccCEEEeCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 44566667664 489999998753 589999999999999999 99999999999999999999999988876554
Q ss_pred eeEEEEEeCCcc
Q psy9827 122 QIHLIVQNRRDE 133 (627)
Q Consensus 122 ~V~L~v~r~~~~ 133 (627)
.+.+++.|+...
T Consensus 94 ~~~l~v~R~~~~ 105 (119)
T 1x6d_A 94 RQAVIVTRKLTP 105 (119)
T ss_dssp SEEEEEEECCCS
T ss_pred eEEEEEEcCCCc
Confidence 455777776544
No 136
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.19 E-value=1.7e-11 Score=107.10 Aligned_cols=83 Identities=35% Similarity=0.578 Sum_probs=74.2
Q ss_pred CCceEEEeccC--CceeEEEEccC-----------CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHH
Q psy9827 49 PDPRFITFQKE--GSVGIRLTGGN-----------KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVL 114 (627)
Q Consensus 49 ~~~r~v~l~k~--g~lG~~i~g~~-----------~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~ 114 (627)
|..+.|.+.+. ++|||++.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++..
T Consensus 8 ~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~ 87 (111)
T 1uju_A 8 PGLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQ 87 (111)
T ss_dssp CSSSCEEEECCTTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHH
T ss_pred CccEEEEEEECCCCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 56778888775 58999999875 2479999999999999999 9999999999999999999999999
Q ss_pred HHhcCCCeeEEEEEeCC
Q psy9827 115 FLLSLQDQIHLIVQNRR 131 (627)
Q Consensus 115 ~l~~~g~~V~L~v~r~~ 131 (627)
.++..+..+.|+|.|+.
T Consensus 88 ~l~~~g~~v~l~v~r~~ 104 (111)
T 1uju_A 88 LLRSVGDTLTVLVCDGF 104 (111)
T ss_dssp HHSSCSSEEEECCCCCC
T ss_pred HHHcCCCeEEEEEEECC
Confidence 99988999999998754
No 137
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=99.19 E-value=1.2e-10 Score=101.35 Aligned_cols=81 Identities=31% Similarity=0.446 Sum_probs=70.2
Q ss_pred CCceEEEeccC-CceeEEEEccCCCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCC-eeEEE
Q psy9827 49 PDPRFITFQKE-GSVGIRLTGGNKVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQD-QIHLI 126 (627)
Q Consensus 49 ~~~r~v~l~k~-g~lG~~i~g~~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~-~V~L~ 126 (627)
..+|.|.+.+. ++|||++.+. .+++|..|.++|||+++||++||+|++|||.++.++++.++...++..++ .|.|+
T Consensus 22 ~~~r~v~l~k~~~~~G~~l~~~--~~v~V~~V~~gspA~~AGL~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~~~v~l~ 99 (109)
T 2vsv_A 22 SMPRSIRFTAEEGDLGFTLRGN--APVQVHFLDPYCSASVAGAREGDYIVSIQLVDCKWLTLSEVMKLLKSFGEDEIEMK 99 (109)
T ss_dssp HSCEEEEECCGGGCCCEEEESS--SSCEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTSCEEEE
T ss_pred CCCEEEEEEeCCCceeEEEeCC--CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEE
Confidence 36788999886 5899999754 57899999999999999999999999999999999998888888886665 49999
Q ss_pred EEeCC
Q psy9827 127 VQNRR 131 (627)
Q Consensus 127 v~r~~ 131 (627)
|.|..
T Consensus 100 V~~~~ 104 (109)
T 2vsv_A 100 VVSLL 104 (109)
T ss_dssp EESCC
T ss_pred EEECC
Confidence 98644
No 138
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=99.19 E-value=7.4e-11 Score=98.48 Aligned_cols=81 Identities=25% Similarity=0.380 Sum_probs=67.3
Q ss_pred CCceEEEeccC-CceeEEEEccC-CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhc--CCCeeE
Q psy9827 49 PDPRFITFQKE-GSVGIRLTGGN-KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLS--LQDQIH 124 (627)
Q Consensus 49 ~~~r~v~l~k~-g~lG~~i~g~~-~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~--~g~~V~ 124 (627)
++.+.+.+.+. ++|||++.+.. ..+++|..| ++|||+ +||++||+|++|||.++.++++.++...++. .++.+.
T Consensus 2 ~~~~~v~l~k~~~g~G~~~~~~~~~~~~~v~~v-~~spA~-aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~ 79 (88)
T 3bpu_A 2 MELITVHIVKGPMGFGFTIADSPGGGGQRVKQI-VDSPRS-RGLKEGDLIVEVNKKNVQALTHNQVVDMLVESPKGSEVT 79 (88)
T ss_dssp EEEEEEEEECBTTBSSCEEEECTTSSSEEEEEC-CC--CC-TTCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEE
T ss_pred CcEEEEEEEcCCCceeEEEEecCCCCcEEEEEe-cCChhH-hCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCCEEE
Confidence 35677888886 58999998763 468999887 999999 9999999999999999999998888888874 688999
Q ss_pred EEEEeCC
Q psy9827 125 LIVQNRR 131 (627)
Q Consensus 125 L~v~r~~ 131 (627)
|+|.|++
T Consensus 80 l~v~R~g 86 (88)
T 3bpu_A 80 LLVQRQT 86 (88)
T ss_dssp EEEEEEC
T ss_pred EEEEeCC
Confidence 9998754
No 139
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.18 E-value=3.8e-11 Score=103.44 Aligned_cols=81 Identities=23% Similarity=0.425 Sum_probs=70.3
Q ss_pred ceEEEeccC-CceeEEEEccC--CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcC--CCeeE
Q psy9827 51 PRFITFQKE-GSVGIRLTGGN--KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSL--QDQIH 124 (627)
Q Consensus 51 ~r~v~l~k~-g~lG~~i~g~~--~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~--g~~V~ 124 (627)
.+.+.+.+. .+|||++.++. ..+++|..|.++|||+++| |++||+|++|||.++.++++.++..+++.. +..|.
T Consensus 10 ~~~v~l~~~~~g~G~~i~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~ 89 (103)
T 1uep_A 10 ELDVHLRRMESGFGFRILGGDEPGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNGQVN 89 (103)
T ss_dssp EECCEEESSSSSCCEEECCCCSTTSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEE
T ss_pred EEEEEEEeCCCccCEEEeeecCCCCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCcEE
Confidence 345566665 48999999864 4689999999999999999 999999999999999999999999888865 79999
Q ss_pred EEEEeCC
Q psy9827 125 LIVQNRR 131 (627)
Q Consensus 125 L~v~r~~ 131 (627)
|+|.|+.
T Consensus 90 l~v~R~~ 96 (103)
T 1uep_A 90 LTVRRKV 96 (103)
T ss_dssp EEEEEEC
T ss_pred EEEEeCC
Confidence 9999865
No 140
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.18 E-value=1.4e-10 Score=98.89 Aligned_cols=84 Identities=30% Similarity=0.483 Sum_probs=70.5
Q ss_pred CCCceEEEeccC-CceeEEEEccC-CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC-CCeeE
Q psy9827 48 EPDPRFITFQKE-GSVGIRLTGGN-KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSL-QDQIH 124 (627)
Q Consensus 48 ~~~~r~v~l~k~-g~lG~~i~g~~-~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~-g~~V~ 124 (627)
...++.+.+.+. .+|||++.++. ..|++|..|.++|||+++||++||+|++|||.++.++++.++...++.. +..+.
T Consensus 7 ~~~~~~~~l~~~~~g~G~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~ 86 (98)
T 2jxo_A 7 MLRPRLCTMKKGPSGYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKL 86 (98)
T ss_dssp SSCCEEEEEECTTTCCCEEEECCCSSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEE
T ss_pred cCCcEEEEEEeCCCcccEEEEecCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEE
Confidence 346788888886 48999998864 3589999999999999999999999999999999999899988888755 44566
Q ss_pred EEEEeCC
Q psy9827 125 LIVQNRR 131 (627)
Q Consensus 125 L~v~r~~ 131 (627)
|++.|++
T Consensus 87 l~v~R~g 93 (98)
T 2jxo_A 87 LVVDRET 93 (98)
T ss_dssp EECCHHH
T ss_pred EEEECCc
Confidence 7777643
No 141
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.17 E-value=5e-11 Score=105.57 Aligned_cols=82 Identities=28% Similarity=0.561 Sum_probs=71.2
Q ss_pred CceEEEeccC--CceeEEEEccCC--CCEEEEEeCCCChhhhc--CCCCCCEEEEECCEeCCCCCHHHHHHHHhcCC---
Q psy9827 50 DPRFITFQKE--GSVGIRLTGGNK--VGIFVTAVQPGSPASLQ--GLQPGDKILKVNDMDMKGITREEAVLFLLSLQ--- 120 (627)
Q Consensus 50 ~~r~v~l~k~--g~lG~~i~g~~~--~gi~V~~V~~gspA~~a--GL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g--- 120 (627)
..+.+.+.+. ++|||++.++.+ .+++|..|.++|||+++ ||++||+|++|||.++.++++.++...++..+
T Consensus 15 ~~~~v~l~k~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~~~~~~ 94 (119)
T 2cs5_A 15 NLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERH 94 (119)
T ss_dssp CCEEEEECCCSSSCCSEEEEEEGGGTEEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHHHHHCC
T ss_pred CeEEEEEEeCCCCCcCEEEecccCCCCCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHHHhccccC
Confidence 5678888885 469999998743 47999999999999999 89999999999999999999999998888663
Q ss_pred -CeeEEEEEeCC
Q psy9827 121 -DQIHLIVQNRR 131 (627)
Q Consensus 121 -~~V~L~v~r~~ 131 (627)
..|.|+|.|+.
T Consensus 95 ~~~v~l~v~R~~ 106 (119)
T 2cs5_A 95 SGELMLLVRPNA 106 (119)
T ss_dssp SSCEEEEEECCC
T ss_pred CCEEEEEEEccc
Confidence 58999998754
No 142
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=99.17 E-value=8.4e-11 Score=101.45 Aligned_cols=81 Identities=21% Similarity=0.367 Sum_probs=69.6
Q ss_pred CCCCceEEEeccC--CceeEEEEcc---------CCCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHH
Q psy9827 47 VEPDPRFITFQKE--GSVGIRLTGG---------NKVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLF 115 (627)
Q Consensus 47 ~~~~~r~v~l~k~--g~lG~~i~g~---------~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~ 115 (627)
..+.++.+.+.+. ++|||++.+. ...+++|..|.++|||+++||++||+|++|||.++.++++.++...
T Consensus 12 s~~~~~~v~l~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~ 91 (104)
T 2z17_A 12 SWSQRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDL 91 (104)
T ss_dssp CCSCCCEEEEECCTTSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCHHHHHHH
T ss_pred CCCcceEEEEEeCCCCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEEcCCCCHHHHHHH
Confidence 4557788888775 5899999983 2358999999999999999999999999999999999999999998
Q ss_pred HhcCCCeeEEEE
Q psy9827 116 LLSLQDQIHLIV 127 (627)
Q Consensus 116 l~~~g~~V~L~v 127 (627)
++..+..|.|+|
T Consensus 92 l~~~~~~v~l~v 103 (104)
T 2z17_A 92 IRSSGNLLTIET 103 (104)
T ss_dssp HHHTTTEEEEEC
T ss_pred HHhCCCcEEEEE
Confidence 887777887765
No 143
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=99.17 E-value=1.5e-10 Score=98.22 Aligned_cols=79 Identities=28% Similarity=0.487 Sum_probs=68.5
Q ss_pred EEEeccC-CceeEEEEcc------CCCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeE
Q psy9827 53 FITFQKE-GSVGIRLTGG------NKVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIH 124 (627)
Q Consensus 53 ~v~l~k~-g~lG~~i~g~------~~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~ 124 (627)
.+.+.+. .+|||++.+. ...+++|..|.++|||+++| |++||+|++|||.++.++++.++...++..+..+.
T Consensus 7 ~v~l~~~~~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~ 86 (97)
T 2iwn_A 7 DVELTKNVQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVL 86 (97)
T ss_dssp EEEEECBTTBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHTCCSEEE
T ss_pred EEEEecCCCCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 3455554 5899999987 24689999999999999999 99999999999999999999998888888899999
Q ss_pred EEEEeCC
Q psy9827 125 LIVQNRR 131 (627)
Q Consensus 125 L~v~r~~ 131 (627)
|+|.|++
T Consensus 87 l~v~r~g 93 (97)
T 2iwn_A 87 LTLMRRG 93 (97)
T ss_dssp EEEEEEE
T ss_pred EEEEeCC
Confidence 9998754
No 144
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.16 E-value=7.2e-11 Score=99.91 Aligned_cols=81 Identities=22% Similarity=0.334 Sum_probs=69.3
Q ss_pred eEEEeccCCceeEEEEccCC--CCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEe
Q psy9827 52 RFITFQKEGSVGIRLTGGNK--VGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQN 129 (627)
Q Consensus 52 r~v~l~k~g~lG~~i~g~~~--~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r 129 (627)
..+.+...++|||++.++.+ .|++|..|.++|||+++||++||+|++|||.++.++++.++...++..+..+.|+|.|
T Consensus 8 ~~~~~~~~~~lG~~l~~g~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R 87 (94)
T 1vb7_A 8 LTVDVAGPAPWGFRISGGRDFHTPIIVTKVTERGKAEAADLRPGDIIVAINGQSAENMLHAEAQSKIRQSASPLRLQLDR 87 (94)
T ss_dssp EEEEECSSSCCSBCCEEETTTTEEEECCCBCTTSSHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSSEEEEEEC
T ss_pred EEEEecCCCCccEEEecccCCCCCeEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEE
Confidence 33444445689999988643 4799999999999999999999999999999999999999988888777899999998
Q ss_pred CCc
Q psy9827 130 RRD 132 (627)
Q Consensus 130 ~~~ 132 (627)
++.
T Consensus 88 ~g~ 90 (94)
T 1vb7_A 88 SSG 90 (94)
T ss_dssp CCC
T ss_pred CCc
Confidence 654
No 145
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.16 E-value=3.4e-11 Score=103.64 Aligned_cols=88 Identities=19% Similarity=0.383 Sum_probs=72.4
Q ss_pred ccCCCCce--EEEeccC-CceeEEEEccCC--CCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhc
Q psy9827 45 FFVEPDPR--FITFQKE-GSVGIRLTGGNK--VGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLS 118 (627)
Q Consensus 45 ~~~~~~~r--~v~l~k~-g~lG~~i~g~~~--~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~ 118 (627)
|+...+.+ .+.+.+. .+|||++.++.+ .+++|..|.++|||+++| |++||+|++|||.++.++++.++...++.
T Consensus 4 ~~~~~~~~~~~v~l~~~~~g~G~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 83 (103)
T 1wfv_A 4 GSSGQDFDYFTVDMEKGAKGFGFSIRGGREYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKS 83 (103)
T ss_dssp CCSCCCSCCEECCEECCTTSSSBCCEEETTTTEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHH
T ss_pred CCCccCceEEEEEEecCCCcCCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 33444443 4445554 489999998643 489999999999999999 99999999999999999999998888887
Q ss_pred CCCeeEEEEEeCCc
Q psy9827 119 LQDQIHLIVQNRRD 132 (627)
Q Consensus 119 ~g~~V~L~v~r~~~ 132 (627)
.+..|.|+|.|+..
T Consensus 84 ~g~~v~l~v~R~~~ 97 (103)
T 1wfv_A 84 GGRRVRLLLKRGTG 97 (103)
T ss_dssp HCSEECEEEECTTC
T ss_pred CCCeEEEEEEECCC
Confidence 88999999998654
No 146
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.16 E-value=1.4e-10 Score=104.25 Aligned_cols=84 Identities=30% Similarity=0.544 Sum_probs=72.4
Q ss_pred CceEEEeccC--CceeEEEEcc-------CCCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcC
Q psy9827 50 DPRFITFQKE--GSVGIRLTGG-------NKVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSL 119 (627)
Q Consensus 50 ~~r~v~l~k~--g~lG~~i~g~-------~~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~ 119 (627)
....+.+.+. ++|||++.++ ...|++|..|.++|||+++| |++||+|++|||.++.++++.++..+++..
T Consensus 15 ~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 94 (129)
T 2dmz_A 15 ETYNVELVRKDGQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLRNA 94 (129)
T ss_dssp EEEEEEECCCTTCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHHHC
T ss_pred cEEEEEEEeCCCCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 3455667553 5899999985 24689999999999999999 999999999999999999999999988888
Q ss_pred CCeeEEEEEeCCcc
Q psy9827 120 QDQIHLIVQNRRDE 133 (627)
Q Consensus 120 g~~V~L~v~r~~~~ 133 (627)
+..|.|+|.|++..
T Consensus 95 ~~~v~l~v~R~~~~ 108 (129)
T 2dmz_A 95 GQVVHLTLVRRKTS 108 (129)
T ss_dssp CSSEEEEEEEESSS
T ss_pred CCeEEEEEEeCCcc
Confidence 99999999987643
No 147
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.15 E-value=2e-10 Score=102.15 Aligned_cols=85 Identities=22% Similarity=0.350 Sum_probs=73.1
Q ss_pred CCCceEEEeccC--CceeEEEEcc------CCCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhc
Q psy9827 48 EPDPRFITFQKE--GSVGIRLTGG------NKVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLS 118 (627)
Q Consensus 48 ~~~~r~v~l~k~--g~lG~~i~g~------~~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~ 118 (627)
.++.+.+.+.+. .+|||++.++ ...+++|..|.++|||+++| |++||+|++|||.++.++++.++..+++.
T Consensus 13 ~~~~~~v~l~k~~~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 92 (122)
T 1v5q_A 13 HTETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRD 92 (122)
T ss_dssp CEEEEEEEECCCSSSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHH
T ss_pred cceeEEEEEEeCCCCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 356777888876 5899999976 23578999999999999999 99999999999999999889898888874
Q ss_pred C--CCeeEEEEEeCCc
Q psy9827 119 L--QDQIHLIVQNRRD 132 (627)
Q Consensus 119 ~--g~~V~L~v~r~~~ 132 (627)
. ++.|.|+|.|+..
T Consensus 93 ~~~g~~v~l~v~R~~~ 108 (122)
T 1v5q_A 93 SSITSKVTLEIEFDVA 108 (122)
T ss_dssp HTTTTCEEEEEEEECC
T ss_pred CCCCCeEEEEEEECCc
Confidence 3 7899999998654
No 148
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.15 E-value=7.8e-11 Score=100.95 Aligned_cols=84 Identities=24% Similarity=0.458 Sum_probs=70.1
Q ss_pred CCCceEEEeccC--CceeEEEEccCC--CCEEEEEeCCCChhhhc-CCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCe
Q psy9827 48 EPDPRFITFQKE--GSVGIRLTGGNK--VGIFVTAVQPGSPASLQ-GLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQ 122 (627)
Q Consensus 48 ~~~~r~v~l~k~--g~lG~~i~g~~~--~gi~V~~V~~gspA~~a-GL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~ 122 (627)
..+.+.+.+... .+|||++.++.+ .+++|..|.++|||+++ ||++||+|++|||.++.++ +.++...++..+..
T Consensus 7 ~~~~~~~~v~~~~~~~~G~~~~gg~~~~~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~-~~~~~~~~~~~~~~ 85 (100)
T 2edp_A 7 GGSFQYVPVQLQGGAPWGFTLKGGLEHCEPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS-RQEALILIKGSFRI 85 (100)
T ss_dssp CCCCEEEEEECCSCSCCCCCEEEEGGGTEEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC-SHHHHHHHHTCCSS
T ss_pred CCCcEEEEEEECCCCCcCEEEeccCCCCCCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch-HHHHHHHHHhCCCe
Confidence 446666665543 489999998643 46899999999999999 8999999999999999997 77788888877899
Q ss_pred eEEEEEeCCc
Q psy9827 123 IHLIVQNRRD 132 (627)
Q Consensus 123 V~L~v~r~~~ 132 (627)
+.|+|.|+..
T Consensus 86 v~l~v~R~~~ 95 (100)
T 2edp_A 86 LKLIVRRRNS 95 (100)
T ss_dssp CEEEEEECCC
T ss_pred EEEEEEeCCC
Confidence 9999998653
No 149
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.15 E-value=5.7e-11 Score=107.08 Aligned_cols=73 Identities=33% Similarity=0.550 Sum_probs=64.7
Q ss_pred CceeEEEEccCC-----CCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcC--CCeeEEEEEeCC
Q psy9827 60 GSVGIRLTGGNK-----VGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSL--QDQIHLIVQNRR 131 (627)
Q Consensus 60 g~lG~~i~g~~~-----~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~--g~~V~L~v~r~~ 131 (627)
++|||++.++.. .+++|..|.++|||+++| |++||+|++|||.++.++++.++..+++.. +..|.|+|.|+.
T Consensus 48 ~~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g 127 (131)
T 1wfg_A 48 AMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRSG 127 (131)
T ss_dssp TTTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEEEEEEC
T ss_pred CCCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEcCC
Confidence 379999998632 389999999999999999 999999999999999999999999988864 589999999865
Q ss_pred c
Q psy9827 132 D 132 (627)
Q Consensus 132 ~ 132 (627)
.
T Consensus 128 ~ 128 (131)
T 1wfg_A 128 P 128 (131)
T ss_dssp S
T ss_pred C
Confidence 3
No 150
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.15 E-value=1.2e-10 Score=104.66 Aligned_cols=80 Identities=24% Similarity=0.386 Sum_probs=69.6
Q ss_pred eEEEeccC-CceeEEEEccC--CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcC--CCeeEE
Q psy9827 52 RFITFQKE-GSVGIRLTGGN--KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSL--QDQIHL 125 (627)
Q Consensus 52 r~v~l~k~-g~lG~~i~g~~--~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~--g~~V~L 125 (627)
..+.+.+. ++|||++.++. ..+++|..|.++|||+++| |++||+|++|||.++.++++.++..+++.. ++.|.|
T Consensus 20 ~~v~l~~~~~g~G~~i~g~~~~~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~g~~v~l 99 (129)
T 2kpk_A 20 IHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDL 99 (129)
T ss_dssp EEEEEEECSSCCSEEEEEEEETTEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTEEEEE
T ss_pred EEEEEEECCCcccEEEeCccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEE
Confidence 45567775 48999999864 3469999999999999999 999999999999999999999999888865 789999
Q ss_pred EEEeCC
Q psy9827 126 IVQNRR 131 (627)
Q Consensus 126 ~v~r~~ 131 (627)
+|.|+.
T Consensus 100 ~v~R~~ 105 (129)
T 2kpk_A 100 ELCRGY 105 (129)
T ss_dssp EEEECS
T ss_pred EEEeCC
Confidence 999865
No 151
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.14 E-value=1.5e-10 Score=99.31 Aligned_cols=83 Identities=35% Similarity=0.590 Sum_probs=69.6
Q ss_pred CCCceEEEeccC---CceeEEEEccC--CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCe
Q psy9827 48 EPDPRFITFQKE---GSVGIRLTGGN--KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQ 122 (627)
Q Consensus 48 ~~~~r~v~l~k~---g~lG~~i~g~~--~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~ 122 (627)
..+++.+.+.+. .+|||++.++. ..|++|..|.++|||+++||++||+|++|||.++.++++.+++..++ .+..
T Consensus 6 ~~~~~~v~l~~~~~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~-~~~~ 84 (101)
T 1uez_A 6 SGEVRLVSLRRAKAHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVTHAEAVKALK-GSKK 84 (101)
T ss_dssp SCCCEEECCCCCCTTTCSSEEEEECTTTTCCEEEEEECTTSHHHHHTCCSSCCEEEETTEECSSCCHHHHHHHSS-SSSS
T ss_pred CCccEEEEEEECCCCCcccEEEeCCCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHhhc-CCCe
Confidence 357888888774 38999999874 46899999999999999999999999999999999999976555544 4568
Q ss_pred eEEEEEeCC
Q psy9827 123 IHLIVQNRR 131 (627)
Q Consensus 123 V~L~v~r~~ 131 (627)
+.|+|.|+.
T Consensus 85 v~l~v~R~g 93 (101)
T 1uez_A 85 LVLSVYSAG 93 (101)
T ss_dssp CCEEECCCC
T ss_pred EEEEEEECC
Confidence 999998754
No 152
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=99.14 E-value=2.5e-10 Score=99.39 Aligned_cols=83 Identities=19% Similarity=0.226 Sum_probs=71.2
Q ss_pred CCCceEEEeccC-CceeEEEEccCCCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC--CCeeE
Q psy9827 48 EPDPRFITFQKE-GSVGIRLTGGNKVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSL--QDQIH 124 (627)
Q Consensus 48 ~~~~r~v~l~k~-g~lG~~i~g~~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~--g~~V~ 124 (627)
.++.+.|.|.|. .+|||+|.++ ..|.+|..|.+ +|+.+||++||+|++|||.++.+++|.+++.+++.+ +..|+
T Consensus 10 ~~~~~~V~L~Kg~~G~GFsI~~~-~~g~~V~~I~~--~~~~aGL~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~~v~ 86 (113)
T 3soe_A 10 AGLLVTIPLIKGPKGFGFAIADS-PTGQKVKMILD--SQWCQGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPVGADVP 86 (113)
T ss_dssp HCEEEEEEEECBTTBSSEEEEEE-TTEEEEEEESC--GGGSTTCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTCEEE
T ss_pred CCCEEEEEEEECCCcccEEEeCC-CCCcEEEEecC--hHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEE
Confidence 356788888886 4999999765 45788999988 588899999999999999999999999999999864 78999
Q ss_pred EEEEeCCcc
Q psy9827 125 LIVQNRRDE 133 (627)
Q Consensus 125 L~v~r~~~~ 133 (627)
|+|.|....
T Consensus 87 L~V~R~g~~ 95 (113)
T 3soe_A 87 LLILRGGPP 95 (113)
T ss_dssp EEEEESSCC
T ss_pred EEEEECCcc
Confidence 999997643
No 153
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=99.14 E-value=2.6e-10 Score=96.00 Aligned_cols=79 Identities=24% Similarity=0.363 Sum_probs=65.7
Q ss_pred CceEEEeccCC----ceeEEEEccC---CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCe
Q psy9827 50 DPRFITFQKEG----SVGIRLTGGN---KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQ 122 (627)
Q Consensus 50 ~~r~v~l~k~g----~lG~~i~g~~---~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~ 122 (627)
..+.+.+.|.. +|||++.... ..|++|..|.++|||+++||++||+|++|||.++.++++.++...+.+ ..
T Consensus 6 ~~~~v~i~k~~~~~~~~Gf~v~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~l~~~l~~--~~ 83 (94)
T 3kzd_A 6 VTHSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ--PS 83 (94)
T ss_dssp EEEEEEEEC------CCSEEEEEECSSSSCEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHS--SE
T ss_pred ceeEEEEEeCCCCcCCcCEEEEecCCCCcCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhC--Ce
Confidence 45778888763 7999998843 247999999999999999999999999999999999999888887774 57
Q ss_pred eEEEEEeC
Q psy9827 123 IHLIVQNR 130 (627)
Q Consensus 123 V~L~v~r~ 130 (627)
++|+|..-
T Consensus 84 l~ltV~~~ 91 (94)
T 3kzd_A 84 LGLLVRTY 91 (94)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEec
Confidence 88887753
No 154
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=99.13 E-value=2.2e-10 Score=100.52 Aligned_cols=83 Identities=23% Similarity=0.400 Sum_probs=72.0
Q ss_pred CceEEEeccC--CceeEEEEcc-CCCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEE
Q psy9827 50 DPRFITFQKE--GSVGIRLTGG-NKVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLI 126 (627)
Q Consensus 50 ~~r~v~l~k~--g~lG~~i~g~-~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~ 126 (627)
+++.+.+.+. ..|||++... ...|++|..|.++|||+++||++||+|++|||.++.++++.++...++..++.|.|+
T Consensus 13 dp~~~~l~~~~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~ 92 (114)
T 2edz_A 13 NPRECKLSKQEGQNYGFFLRIEKDTDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVTLL 92 (114)
T ss_dssp CCEEEEEECCTTCCCSCEEECCTTCCSCEEECCCTTCTTGGGTCCTTCEEEEESSSBCSSSCHHHHHHHHHHTCSEEEEE
T ss_pred CCEEEEEeCCCCCcccEEEEEecCCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEE
Confidence 6677777664 4789888865 346899999999999999999999999999999999999999988888779999999
Q ss_pred EEeCCc
Q psy9827 127 VQNRRD 132 (627)
Q Consensus 127 v~r~~~ 132 (627)
|.|+..
T Consensus 93 v~R~~~ 98 (114)
T 2edz_A 93 VLDGDS 98 (114)
T ss_dssp EECHHH
T ss_pred EEECCc
Confidence 998654
No 155
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.13 E-value=3.3e-10 Score=130.44 Aligned_cols=137 Identities=23% Similarity=0.331 Sum_probs=109.4
Q ss_pred cCCCCccc-cccCCeeeccCCeecCcCChHHHHHHHhhcCCeEEEEEeecccCCCCCCCccEEEEEeecCCCCCeeeeeC
Q psy9827 140 SQRGDSFH-IKVNDRIMSANGLSLENVEYGTAVQVLRDSGSTVTLKVRRRIVLPASPEPQTLRVQLSKSRKKDDFGIILG 218 (627)
Q Consensus 140 ~~~~~~~~-l~~~D~i~~vng~~l~~~~~~~~~~~l~~sg~~v~l~v~r~~~~p~~~~~~~~~V~L~k~~~~~~~gi~~~ 218 (627)
++++...+ |+.||.|++|||..+.++++.+++.+++.++..+.|.+.|.... ....+.|+|.+...+.||.+..+
T Consensus 99 gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~~----~~~~~~v~l~k~~~~lG~~i~~~ 174 (721)
T 2xkx_A 99 GGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRRKPP----AEKVMEIKLIKGPKGLGFSIAGG 174 (721)
T ss_pred CCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHhhccccccceEEEecccc----cccceeeeeeeecCCCceeeccC
Confidence 34444445 99999999999999999999999999999999999999776311 11346788887654444444432
Q ss_pred ---------CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEEEEEEeCCCC
Q psy9827 219 ---------NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 284 (627)
Q Consensus 219 ---------~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~l~V~r~~~~ 284 (627)
.|++|..|.+|+ +|..+| |++||+|++|||+++.++++.+++.+++..++.+.|.|.|++..
T Consensus 175 ~~~~~~~~~~gv~V~~V~~gs----~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~V~R~g~~ 246 (721)
T 2xkx_A 175 VGNQHIPGDNSIYVTKIIEGG----AAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDVVYLKVAKPSNA 246 (721)
T ss_pred CCccccCCCCceEEEEeCCCC----chhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHHcCCCeEEEEEEeCCcc
Confidence 489999998873 444556 99999999999999999999999999998888999999998754
No 156
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.11 E-value=3.3e-11 Score=107.88 Aligned_cols=84 Identities=27% Similarity=0.418 Sum_probs=73.9
Q ss_pred CCCceEEEeccC-CceeEEEEcc------------------------------CCCCEEEEEeCCCChhhhcCCCCCCEE
Q psy9827 48 EPDPRFITFQKE-GSVGIRLTGG------------------------------NKVGIFVTAVQPGSPASLQGLQPGDKI 96 (627)
Q Consensus 48 ~~~~r~v~l~k~-g~lG~~i~g~------------------------------~~~gi~V~~V~~gspA~~aGL~~GD~I 96 (627)
.+.+|.|.|.|. .+|||++.+. ...+++|..|.++|||+++||++||+|
T Consensus 6 ~~~~r~v~l~r~~~g~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I 85 (126)
T 2yuy_A 6 SGGPKTVTLKRTSQGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAGLCTGDRI 85 (126)
T ss_dssp SSSCCCEEEECCSSSCSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHTCCSSCCC
T ss_pred CCCCEEEEEEECCCCcceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcCCCCCCEE
Confidence 568889999886 4899999751 125699999999999999999999999
Q ss_pred EEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEeCC
Q psy9827 97 LKVNDMDMKGITREEAVLFLLSLQDQIHLIVQNRR 131 (627)
Q Consensus 97 l~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r~~ 131 (627)
++|||.++.++++.++..+++..+..|.|+|.|..
T Consensus 86 ~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~ 120 (126)
T 2yuy_A 86 IKVNGESVIGKTYSQVIALIQNSDTTLELSVMPKD 120 (126)
T ss_dssp CEETTEECSSCCHHHHHHHHHTCTTEEEEECCCCC
T ss_pred EEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECC
Confidence 99999999999999999999988999999998755
No 157
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=99.11 E-value=1.1e-10 Score=117.24 Aligned_cols=84 Identities=32% Similarity=0.482 Sum_probs=75.9
Q ss_pred CceEEEeccC--CceeEEEEccC--CCCEEEEEeCCCChhhh-cCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeE
Q psy9827 50 DPRFITFQKE--GSVGIRLTGGN--KVGIFVTAVQPGSPASL-QGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIH 124 (627)
Q Consensus 50 ~~r~v~l~k~--g~lG~~i~g~~--~~gi~V~~V~~gspA~~-aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~ 124 (627)
..+.|.+.|. ++|||+|.++. ..|++|..|.+||||++ +||++||+|++|||.++.++++.+++.+++..++.|+
T Consensus 77 ~~r~V~L~k~~~~glGf~I~gg~d~~~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~~~g~~V~ 156 (263)
T 1z87_A 77 QRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVV 156 (263)
T ss_dssp SSEEECCCTTTTCCCCCEEEEETTTTEEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHHHCCSCCC
T ss_pred ccEEEEEEeCCCCCEeEEEeeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHhcCCCeEE
Confidence 5688999886 48999999974 36899999999999999 6999999999999999999999999999998899999
Q ss_pred EEEEeCCcc
Q psy9827 125 LIVQNRRDE 133 (627)
Q Consensus 125 L~v~r~~~~ 133 (627)
|+|.|.+..
T Consensus 157 L~V~R~~~~ 165 (263)
T 1z87_A 157 LEVKYMKEV 165 (263)
T ss_dssp EEEECCSSS
T ss_pred EEEEeCccc
Confidence 999987654
No 158
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.10 E-value=4.5e-10 Score=96.76 Aligned_cols=70 Identities=39% Similarity=0.630 Sum_probs=62.0
Q ss_pred ceeEEEEccC--------------CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHh-cCCCeeEE
Q psy9827 61 SVGIRLTGGN--------------KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLL-SLQDQIHL 125 (627)
Q Consensus 61 ~lG~~i~g~~--------------~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~-~~g~~V~L 125 (627)
+|||++.++. ..|++|..|.++|||+++||++||+|++|||.++.+.++.++...++ ..+..+.|
T Consensus 20 ~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l 99 (104)
T 3sfj_A 20 ILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVVRL 99 (104)
T ss_dssp ECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHTCTTCSEEEE
T ss_pred cccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEEE
Confidence 6999999542 35799999999999999999999999999999999999989888887 45789999
Q ss_pred EEEeC
Q psy9827 126 IVQNR 130 (627)
Q Consensus 126 ~v~r~ 130 (627)
+|.|+
T Consensus 100 ~v~R~ 104 (104)
T 3sfj_A 100 LVTRQ 104 (104)
T ss_dssp EEEEC
T ss_pred EEEcC
Confidence 98873
No 159
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.10 E-value=4.9e-11 Score=101.40 Aligned_cols=81 Identities=25% Similarity=0.373 Sum_probs=72.1
Q ss_pred CCCceEEEeccCC---ceeEEEEccCCCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeE
Q psy9827 48 EPDPRFITFQKEG---SVGIRLTGGNKVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIH 124 (627)
Q Consensus 48 ~~~~r~v~l~k~g---~lG~~i~g~~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~ 124 (627)
.|.++.+.+.+.. +|||.+.+ ..+++|..|.++|||+ +||++||+|++|||.++.++++.++...++..++.|.
T Consensus 6 ~~~~~~v~l~~~~~~~~~G~~l~~--~~~~~V~~V~~~spA~-agL~~GD~Il~ing~~v~~~~~~~~~~~~~~~g~~v~ 82 (96)
T 2edv_A 6 SGVRHTVKIDKDTLLQDYGFHISE--SLPLTVVAVTAGGSAH-GKLFPGDQILQMNNEPAEDLSWERAVDILREAEDSLS 82 (96)
T ss_dssp SCEEEEEEECCCSSSCSCSBCCCS--SSSCBCCCBCSSSSST-TTSCTTCBEEEESSCBSTTCCHHHHHHHHHHCSSCEE
T ss_pred CCccEEEEEEECCCCCcccEEEec--CCCeEEEEECCCCchh-hCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 4667888888764 79999876 4689999999999996 9999999999999999999999999998888899999
Q ss_pred EEEEeCC
Q psy9827 125 LIVQNRR 131 (627)
Q Consensus 125 L~v~r~~ 131 (627)
|+|.|+.
T Consensus 83 l~v~R~~ 89 (96)
T 2edv_A 83 ITVVRCT 89 (96)
T ss_dssp EEEEECC
T ss_pred EEEEECC
Confidence 9999865
No 160
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.10 E-value=5.5e-10 Score=93.68 Aligned_cols=65 Identities=20% Similarity=0.374 Sum_probs=59.5
Q ss_pred CceeEEEEccCCCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEe
Q psy9827 60 GSVGIRLTGGNKVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQN 129 (627)
Q Consensus 60 g~lG~~i~g~~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r 129 (627)
++|||.+.++ +|..|.++|||+++||++||+|++|||.++.+.++.++...++..++.+.|+|.+
T Consensus 24 ~~lG~~~~~G-----~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~v~l~v~p 88 (90)
T 1y7n_A 24 YQLGFSVQNG-----IICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHILSNAVGEIHMKTMP 88 (90)
T ss_dssp SCCCEEEETT-----EEEEECTTSHHHHHTCCSSCEEEEETTEECTTSCHHHHHHHHHHCCEEEEEEEEC
T ss_pred cccCeEecCC-----EEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 5899998653 8999999999999999999999999999999999999999998888999999874
No 161
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=99.09 E-value=5.2e-10 Score=98.10 Aligned_cols=85 Identities=29% Similarity=0.477 Sum_probs=70.4
Q ss_pred CCCceEEEeccC--CceeEEEEccC--CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCee
Q psy9827 48 EPDPRFITFQKE--GSVGIRLTGGN--KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQI 123 (627)
Q Consensus 48 ~~~~r~v~l~k~--g~lG~~i~g~~--~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V 123 (627)
.+..+.+.+.+. .+|||++.++. ..|++|..|.++|||+++||++||+|++|||.++.++++.++...++.. ..+
T Consensus 13 ~~~~~~v~~~~~~~~~lG~~l~~~~~~~~gv~V~~V~~~s~A~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~~-~~v 91 (114)
T 1x5n_A 13 ENKEKKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKEAVNVLKSS-RSL 91 (114)
T ss_dssp CCSSEEEEECCCSSCCCCEEEEECCSSSCSEEEEEECTTSTTTTTTCCTTCEEEEETTEETTSCCTTHHHHHHHHC-SSE
T ss_pred CCCcEEEEEEEcCCCceeEEEeecCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcC-CeE
Confidence 455677777554 48999999863 3589999999999999999999999999999999999987777777654 689
Q ss_pred EEEEEeC-Ccc
Q psy9827 124 HLIVQNR-RDE 133 (627)
Q Consensus 124 ~L~v~r~-~~~ 133 (627)
.|+|.|+ ...
T Consensus 92 ~l~v~r~~g~~ 102 (114)
T 1x5n_A 92 TISIVAAAGRE 102 (114)
T ss_dssp EEEECSSTTTH
T ss_pred EEEEEcCCCCc
Confidence 9999876 443
No 162
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.09 E-value=6e-11 Score=102.21 Aligned_cols=84 Identities=24% Similarity=0.390 Sum_probs=72.4
Q ss_pred ceEEEeccCCceeEEEEccCC--CCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEE
Q psy9827 51 PRFITFQKEGSVGIRLTGGNK--VGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQ 128 (627)
Q Consensus 51 ~r~v~l~k~g~lG~~i~g~~~--~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~ 128 (627)
.+.+.+...++|||++.++.+ .+++|..|.++|||+++||++||+|++|||.++.++++.++...++..++.+.|+|.
T Consensus 6 ~~~v~~~~~~~lG~~l~~g~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~ 85 (103)
T 1v5l_A 6 SGNVVLPGPAPWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKID 85 (103)
T ss_dssp CBCCEEESSSCCSBCCEEETTTTEEEECSCBCTTSTTGGGTCCTTCBEEEETTEECSSCCHHHHHHHHTTCCSEEECEEC
T ss_pred EEEEEEcCCCCcCEEEeccccCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEE
Confidence 445556566789999988753 479999999999999999999999999999999999999999888877999999999
Q ss_pred eCCccc
Q psy9827 129 NRRDEY 134 (627)
Q Consensus 129 r~~~~~ 134 (627)
|+....
T Consensus 86 R~g~~~ 91 (103)
T 1v5l_A 86 RAETRL 91 (103)
T ss_dssp CCTTTT
T ss_pred ECCeEc
Confidence 876543
No 163
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.09 E-value=3.9e-10 Score=94.18 Aligned_cols=68 Identities=26% Similarity=0.405 Sum_probs=62.2
Q ss_pred CceeEEEEccCCCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEeCC
Q psy9827 60 GSVGIRLTGGNKVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQNRR 131 (627)
Q Consensus 60 g~lG~~i~g~~~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r~~ 131 (627)
..+||.+.+ |++|..|.+||||+++| |++||+|++|||.++.+.++.++..+++..+..+.|++.+..
T Consensus 13 ~~~G~~~~~----gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~v~L~v~~~~ 81 (88)
T 3e17_A 13 EEYGLRLGS----QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSRGKLQLVVLRDL 81 (88)
T ss_dssp CCCCEEEEE----EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEEEECCC-
T ss_pred CCCCEEEeC----CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEeCCC
Confidence 479998875 69999999999999999 999999999999999999999999999988899999988643
No 164
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.09 E-value=4.2e-10 Score=94.34 Aligned_cols=82 Identities=17% Similarity=0.198 Sum_probs=68.9
Q ss_pred cEEEEEeecCCCCCeeeeeC--CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCC--CeE
Q psy9827 199 TLRVQLSKSRKKDDFGIILG--NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSK--EKL 274 (627)
Q Consensus 199 ~~~V~L~k~~~~~~~gi~~~--~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~--~~v 274 (627)
...|.|.|...+.||.|..+ ..+||++|.+| +.+++++.|++||.|++|||+++.+++|.|++++|++.+ ..+
T Consensus 6 ~k~V~l~K~~~~LG~tI~~~g~g~~~I~rI~~g---g~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~~ 82 (95)
T 3gge_A 6 EKEVNVYKSEDSLGLTITDNGVGYAFIKRIKDG---GVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKEELF 82 (95)
T ss_dssp EEEEEEECCSSCCCEEEECSSSSCCEEEEECTT---SHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEE
T ss_pred EEEEEEEECCCCceEEEEcCCCCcEEEEEEcCC---ChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCEE
Confidence 45788999876666666642 36999999988 578889999999999999999999999999999999854 489
Q ss_pred EEEEEeCCC
Q psy9827 275 SLTIRREVP 283 (627)
Q Consensus 275 ~l~V~r~~~ 283 (627)
+|++.++.+
T Consensus 83 ~L~lv~p~~ 91 (95)
T 3gge_A 83 TMKLIEPKK 91 (95)
T ss_dssp EEEEEEECS
T ss_pred EEEEECccc
Confidence 999888644
No 165
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.08 E-value=1.7e-10 Score=98.73 Aligned_cols=79 Identities=25% Similarity=0.286 Sum_probs=68.0
Q ss_pred ceEEEeccC-CceeEEEEccCCCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEe
Q psy9827 51 PRFITFQKE-GSVGIRLTGGNKVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQN 129 (627)
Q Consensus 51 ~r~v~l~k~-g~lG~~i~g~~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r 129 (627)
...+.+.+. .+|||.+.+. .+++|..|.++|||+++||++||+|++|||.++.++++.++...++..+..|.|+|.|
T Consensus 16 ~~~v~l~~~~~g~G~~~~~~--~~~~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R 93 (100)
T 1whd_A 16 KLQITIRRGKDGFGFTICCD--SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILLVWR 93 (100)
T ss_dssp EEEEEEECCSSSSSCBCCCS--SSCBCCBCCTTSHHHHHTCCSSCEEEEETTEECTTCCHHHHHHHHHHCSSEEEEEEEE
T ss_pred eEEEEEECCCCeeeEEEeCC--CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 344566665 5899988765 5799999999999999999999999999999999999999988888777789999988
Q ss_pred CC
Q psy9827 130 RR 131 (627)
Q Consensus 130 ~~ 131 (627)
+.
T Consensus 94 ~~ 95 (100)
T 1whd_A 94 VS 95 (100)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 166
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.67 E-value=1.2e-11 Score=108.44 Aligned_cols=92 Identities=32% Similarity=0.508 Sum_probs=75.9
Q ss_pred CCCCccccccCCC---CceEEEeccC--CceeEEEEccCC--CCEEEEEeCCCChhhh-cCCCCCCEEEEECCEeCCCCC
Q psy9827 37 GSPDLFSIFFVEP---DPRFITFQKE--GSVGIRLTGGNK--VGIFVTAVQPGSPASL-QGLQPGDKILKVNDMDMKGIT 108 (627)
Q Consensus 37 ~~~d~~~~~~~~~---~~r~v~l~k~--g~lG~~i~g~~~--~gi~V~~V~~gspA~~-aGL~~GD~Il~VnG~~v~~~~ 108 (627)
.++|+++.++... ..+.+.+.+. ++|||++.++.+ .|++|..|.+||||++ +||++||+|++|||.++.+.+
T Consensus 11 ~~~~~~~~~me~~~~~~~~~v~l~k~~~~glG~~l~~g~~~~~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~ 90 (112)
T 2lob_A 11 SSGHIEGRHMENLYFQGIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTK 90 (112)
Confidence 3567777766544 5567777665 489999998743 4799999999999999 899999999999999999999
Q ss_pred HHHHHHHHhcCCCeeEEEEE
Q psy9827 109 REEAVLFLLSLQDQIHLIVQ 128 (627)
Q Consensus 109 ~~~~~~~l~~~g~~V~L~v~ 128 (627)
..++...++..++.++|+|.
T Consensus 91 ~~~~~~~l~~~~~~v~l~V~ 110 (112)
T 2lob_A 91 HKEAVTILSQQRGEIEFEVV 110 (112)
Confidence 99998888877777888765
No 167
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.07 E-value=3e-10 Score=99.67 Aligned_cols=83 Identities=23% Similarity=0.356 Sum_probs=69.9
Q ss_pred CCceEEEeccCC----ceeEEEEccCC---CCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCC
Q psy9827 49 PDPRFITFQKEG----SVGIRLTGGNK---VGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQD 121 (627)
Q Consensus 49 ~~~r~v~l~k~g----~lG~~i~g~~~---~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~ 121 (627)
..++.+.+.+.+ +|||++.+..+ .+++|..|.++|||+++||++||+|++|||.++.++++.++...++. .
T Consensus 14 ~~~~~v~l~k~~~~~~~~G~~v~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~--~ 91 (114)
T 2d8i_A 14 KVTQSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ--P 91 (114)
T ss_dssp CEEEEEEEECSCTTTCCCCCEEEEEEETTEEEEEEEECCTTSSHHHHTCCTTCCEEEESSCBGGGCCHHHHHHHHTS--S
T ss_pred CceEEEEEEeCCCCccccCEEEEecCcCCcCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhC--C
Confidence 356788888764 59999987532 47999999999999999999999999999999999988888777774 4
Q ss_pred eeEEEEEeCCcc
Q psy9827 122 QIHLIVQNRRDE 133 (627)
Q Consensus 122 ~V~L~v~r~~~~ 133 (627)
.+.|+|.|.+..
T Consensus 92 ~v~l~v~R~p~~ 103 (114)
T 2d8i_A 92 SLGLLVRTYPEL 103 (114)
T ss_dssp EEEEEEEECCCS
T ss_pred cEEEEEEECCCC
Confidence 899999986644
No 168
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=99.07 E-value=4.9e-10 Score=107.81 Aligned_cols=83 Identities=22% Similarity=0.441 Sum_probs=73.5
Q ss_pred CCceEEEeccC--CceeEEEEccC--CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeE
Q psy9827 49 PDPRFITFQKE--GSVGIRLTGGN--KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIH 124 (627)
Q Consensus 49 ~~~r~v~l~k~--g~lG~~i~g~~--~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~ 124 (627)
+..+.+.+.+. ++|||++.++. ..|++|..|.+||||+++||++||+|++|||.++.++++.++...++. +..|.
T Consensus 83 ~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~l~~-~~~v~ 161 (192)
T 3k1r_A 83 RKLKEVRLDRLHPEGLGLSVRGGLEFGCGLFISHLIKGGQADSVGLQVGDEIVRINGYSISSCTHEEVINLIRT-EKTVS 161 (192)
T ss_dssp SSCEEEEEETTSTTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHTS-SSEEE
T ss_pred CceEEEEEEeCCCCceeEEEEcccccCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHcC-CCeEE
Confidence 35677888876 48999998863 358999999999999999999999999999999999999999998888 99999
Q ss_pred EEEEeCCc
Q psy9827 125 LIVQNRRD 132 (627)
Q Consensus 125 L~v~r~~~ 132 (627)
|+|.|.+.
T Consensus 162 l~v~r~g~ 169 (192)
T 3k1r_A 162 IKVRHIGL 169 (192)
T ss_dssp EEEEECCE
T ss_pred EEEEECCc
Confidence 99998654
No 169
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=99.06 E-value=9e-10 Score=98.65 Aligned_cols=87 Identities=31% Similarity=0.499 Sum_probs=74.1
Q ss_pred CCCCceEEEeccC-CceeEEEEccC-CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC-CCee
Q psy9827 47 VEPDPRFITFQKE-GSVGIRLTGGN-KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSL-QDQI 123 (627)
Q Consensus 47 ~~~~~r~v~l~k~-g~lG~~i~g~~-~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~-g~~V 123 (627)
..+.++.+.+.+. .+|||++.++. ..|++|..|.++|||+++||++||+|++|||.++.++++.++...++.. +..+
T Consensus 6 ~~~~~r~v~l~~~~~g~G~~l~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~ 85 (128)
T 2kjd_A 6 TMLRPRLCTMKKGPSGYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETK 85 (128)
T ss_dssp TTCCCEEEEEECCSSSCCEEEEECSSSCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEE
T ss_pred CCCCcEEEEEecCCCcccEEEEecCCCCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEE
Confidence 4568899999886 58999998865 3589999999999999999999999999999999999888888888754 5567
Q ss_pred EEEEEeCCcc
Q psy9827 124 HLIVQNRRDE 133 (627)
Q Consensus 124 ~L~v~r~~~~ 133 (627)
.|++.|++..
T Consensus 86 ~l~v~R~g~~ 95 (128)
T 2kjd_A 86 LLVVDRETDE 95 (128)
T ss_dssp EEEECHHHHH
T ss_pred EEEEEeCCcc
Confidence 7888876543
No 170
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=99.05 E-value=7.7e-11 Score=124.15 Aligned_cols=128 Identities=22% Similarity=0.261 Sum_probs=96.5
Q ss_pred cccCC-CCCCCCCC-------CceeeeecccccCCCCCccccccCCCCceEEE----ec-----cCCceeEEEEccC---
Q psy9827 11 FQKEG-SVGIRLTG-------GNKVGIFVTAVQPGSPDLFSIFFVEPDPRFIT----FQ-----KEGSVGIRLTGGN--- 70 (627)
Q Consensus 11 ~~~~~-~~~~~~~~-------g~~iGin~~ai~~~~~d~~~~~~~~~~~r~v~----l~-----k~g~lG~~i~g~~--- 70 (627)
+.+++ ++|.++|+ |++|||+ ++.....+...+++|++|-..... +. ..+.||+++....
T Consensus 168 ~i~~da~i~~G~SGGPLvn~~G~vvGI~-s~~~~~~~~~~g~gfaiP~~~~~~~~~~l~~~g~~~~~~lGi~~~~~~~~~ 246 (348)
T 3qo6_A 168 VIQTDAAINPGNSGGPLLDSSGTLIGIN-TAIYSPSGASSGVGFSIPVDTVGGIVDQLVRFGKVTRPILGIKFAPDQSVE 246 (348)
T ss_dssp EEEECSCCCTTCTTCEEECTTSCEEEEE-EEEECSSSSCSSCEEEEEHHHHHHHHHHHHHHSSCCCEECCCEECCTTTTT
T ss_pred EEEEeCCcCCCCcHHHhhCCCCeEEEEE-EeeecCCCCcccEEEEEEecchHHHHHHHHhCCceeeeecCcEEccchhhh
Confidence 34455 88888774 6778999 888777766778888888543321 11 1357999886532
Q ss_pred ---CCCEEEEEeCCCChhhhcCCCC-----------CCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEeCCcccce
Q psy9827 71 ---KVGIFVTAVQPGSPASLQGLQP-----------GDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQNRRDEYEH 136 (627)
Q Consensus 71 ---~~gi~V~~V~~gspA~~aGL~~-----------GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r~~~~~~~ 136 (627)
..|++|..|.++|||++|||++ ||+|++|||.++.++.+......-...|++|+|+|.|++.....
T Consensus 247 ~~~~~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~ 326 (348)
T 3qo6_A 247 QLGVSGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLYRILDQCKVGDEVTVEVLRGDHKEKI 326 (348)
T ss_dssp TTTCSSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECEETTBCCSSSHHHHHHHTTCCTTCEEEEEEECSSSEEEE
T ss_pred hcCCceEEEEEecCCChHHHcCCccccccccCCCCCCCEEEEECCEEeCCHHHHHHHHHhCCCcCEEEEEEEECCEEEEE
Confidence 2689999999999999999999 99999999999999866554433346789999999998876655
Q ss_pred eee
Q psy9827 137 VVA 139 (627)
Q Consensus 137 ~v~ 139 (627)
.++
T Consensus 327 ~v~ 329 (348)
T 3qo6_A 327 SVT 329 (348)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 171
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.04 E-value=1.5e-09 Score=92.09 Aligned_cols=81 Identities=20% Similarity=0.315 Sum_probs=69.0
Q ss_pred CCceEEEeccC-CceeEEEEccCCCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhc--CCCeeEE
Q psy9827 49 PDPRFITFQKE-GSVGIRLTGGNKVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLS--LQDQIHL 125 (627)
Q Consensus 49 ~~~r~v~l~k~-g~lG~~i~g~~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~--~g~~V~L 125 (627)
++...+.+.+. .+|||++.+. ..|++|..|.++ |+++||++||+|++|||.++.++++.++...++. .++.|.|
T Consensus 9 ~~~~~v~l~~~~~g~G~~i~~~-~~Gv~V~~v~~~--a~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l 85 (96)
T 1ujv_A 9 AELMTLTIVKGAQGFGFTIADS-PTGQRVKQILDI--QGCPGLCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSETSL 85 (96)
T ss_dssp CCCEEEEEECCSSSSSEEEEEE-TTEEEEEEESCG--GGSTTCCSSCEEEEETTEECSSCCHHHHHHHHHHSCTTSEEEE
T ss_pred ceEEEEEEEeCCCceeEEEEcC-CCCEEEEEEecc--cccCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEE
Confidence 46677778776 5899999754 348999999983 7899999999999999999999999999988885 4789999
Q ss_pred EEEeCCc
Q psy9827 126 IVQNRRD 132 (627)
Q Consensus 126 ~v~r~~~ 132 (627)
+|.|+..
T Consensus 86 ~v~R~g~ 92 (96)
T 1ujv_A 86 IIHRGSG 92 (96)
T ss_dssp EEECCSS
T ss_pred EEEECCC
Confidence 9998653
No 172
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.03 E-value=2.1e-09 Score=93.82 Aligned_cols=87 Identities=21% Similarity=0.335 Sum_probs=72.1
Q ss_pred eEEEeccC--CceeEEEEccC-CCCEEEEEeCCCChhhhcCC-CCCCEEEEECCEeCCCCCHHHHHHHHhc-CCCeeEEE
Q psy9827 52 RFITFQKE--GSVGIRLTGGN-KVGIFVTAVQPGSPASLQGL-QPGDKILKVNDMDMKGITREEAVLFLLS-LQDQIHLI 126 (627)
Q Consensus 52 r~v~l~k~--g~lG~~i~g~~-~~gi~V~~V~~gspA~~aGL-~~GD~Il~VnG~~v~~~~~~~~~~~l~~-~g~~V~L~ 126 (627)
..+.+.+. ++|||++.+.. ..+++|..|.++|||+++|| ++||+|++|||.++.++++.++...+.. .+..+.|+
T Consensus 3 ~~v~l~~~~~~glG~~~~~~~~~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~ 82 (112)
T 1qau_A 3 ISVRLFKRKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVL 82 (112)
T ss_dssp EEEEEECBTTTBTSEEEEECSSSSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHHSCSSSEEEE
T ss_pred EEEEEEcCCCCceeEEEEecCCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCcEEEE
Confidence 34566554 58999998864 35899999999999999997 9999999999999999888888877774 57899999
Q ss_pred EEeCCcccceee
Q psy9827 127 VQNRRDEYEHVV 138 (627)
Q Consensus 127 v~r~~~~~~~~v 138 (627)
+.|++......+
T Consensus 83 v~R~g~~~~~~~ 94 (112)
T 1qau_A 83 ILRGPEGFTTHL 94 (112)
T ss_dssp EEECCTTSEEEE
T ss_pred EEeCCcccceEe
Confidence 999876654443
No 173
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=99.03 E-value=1e-09 Score=105.65 Aligned_cols=69 Identities=42% Similarity=0.670 Sum_probs=64.4
Q ss_pred CceeEEEEccC----------CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEe
Q psy9827 60 GSVGIRLTGGN----------KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQN 129 (627)
Q Consensus 60 g~lG~~i~g~~----------~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r 129 (627)
++|||+|.|+. +.|++|..|.+||||++ ||++||+|++|||.++.++++.+++..++..+..|.|+|.|
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-gl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r 80 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVR 80 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEEE
T ss_pred CcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 57999999963 46899999999999999 99999999999999999999999999999888899999998
No 174
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.02 E-value=5.6e-10 Score=93.19 Aligned_cols=81 Identities=43% Similarity=0.687 Sum_probs=66.6
Q ss_pred EEEEEeecCCCCCeeeeeCCcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEEEEEE
Q psy9827 200 LRVQLSKSRKKDDFGIILGNKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIR 279 (627)
Q Consensus 200 ~~V~L~k~~~~~~~gi~~~~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~l~V~ 279 (627)
+.|+|.+......||+....|++|..|.+|+ +|++.+.|++||+|++|||+++.+++++++..+|+.+++.++|++.
T Consensus 2 l~v~l~~~~~~~~~G~~~~~gv~V~~V~~gs---pA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~v~L~v~ 78 (88)
T 3e17_A 2 IGVLLMKSRANEEYGLRLGSQIFVKEMTRTG---LATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSRGKLQLVVL 78 (88)
T ss_dssp EEEEEECBTTBCCCCEEEEEEEEEEEECTTS---HHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEEEEC
T ss_pred eEEEEEeCCCCCCCCEEEeCCEEEEEECCCC---HHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEe
Confidence 4567777666678888887899999999873 3333344999999999999999999999999999999999999998
Q ss_pred eCCC
Q psy9827 280 REVP 283 (627)
Q Consensus 280 r~~~ 283 (627)
+...
T Consensus 79 ~~~~ 82 (88)
T 3e17_A 79 RDLE 82 (88)
T ss_dssp CC--
T ss_pred CCCc
Confidence 7543
No 175
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=99.01 E-value=9.2e-10 Score=99.50 Aligned_cols=97 Identities=25% Similarity=0.342 Sum_probs=72.5
Q ss_pred cccccCCCCceEEE----ecc-----CCceeEEEEccC----------------CCCEEEEEeCCCChhhhcCCCCCCEE
Q psy9827 42 FSIFFVEPDPRFIT----FQK-----EGSVGIRLTGGN----------------KVGIFVTAVQPGSPASLQGLQPGDKI 96 (627)
Q Consensus 42 ~~~~~~~~~~r~v~----l~k-----~g~lG~~i~g~~----------------~~gi~V~~V~~gspA~~aGL~~GD~I 96 (627)
.|++|++|...... |.+ .++||+++.... ..|++|..|.++|||+ +||++||+|
T Consensus 2 ~GigFAIP~~~~~~v~~~L~~~G~v~r~~LGv~~~~~~~~~~~~~~~lgl~~~~~~g~~V~~V~~~spA~-aGL~~GD~I 80 (134)
T 2l97_A 2 EGLGFAIPANDAINIIEQLEKNGKVTRPALGIQMVNLSNVSTSDIRRLNIPSNVTSGVIVRSVQSNMPAN-GHLEKYDVI 80 (134)
T ss_dssp CCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCEEEESSSSCHHHHHHHSSCSSSCSCEEEEECSTTSGGG-TTSCSSCEE
T ss_pred CcEEEEeEHHHHHHHHHHHHHcCCEeeeEeeEEEEECCchhHHHHHHcCCCcCCCCCEEEEEECCCCchH-HCCCCCCEE
Confidence 46788888664322 222 357999887532 3689999999999999 999999999
Q ss_pred EEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEeCCcccceeee
Q psy9827 97 LKVNDMDMKGITREEAVLFLLSLQDQIHLIVQNRRDEYEHVVA 139 (627)
Q Consensus 97 l~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r~~~~~~~~v~ 139 (627)
++|||.++.++.+..........++.+.|+|.|++......+.
T Consensus 81 ~~inG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 123 (134)
T 2l97_A 81 TKVDDKEIASSTDLQSALYNHSIGDTIKITYYRNGKEETTSIK 123 (134)
T ss_dssp EEETTEECCCHHHHHHHHHHSSTTCEEEEEEEETTEEEEEEEE
T ss_pred EEECCEEcCCHHHHHHHHHhCCCCCEEEEEEEECCEEEEEEEE
Confidence 9999999998765544433334789999999998766554443
No 176
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii}
Probab=99.01 E-value=1.4e-09 Score=104.97 Aligned_cols=146 Identities=11% Similarity=0.026 Sum_probs=102.8
Q ss_pred CceEEEeCcc---HHHHHHHHhhhCCCCccc-------CCC-------CCCCCHHHHHHHHhccc-----ccCCcee---
Q psy9827 454 IRPVVLFGPV---ADLARDKLLKDFPDKFSA-------PRK-------FNFILWATIKDTAMYQS-----SKEPGMY--- 508 (627)
Q Consensus 454 ~RpvVl~Gp~---k~~l~~~Ll~~~p~~f~~-------~~~-------~~Fvs~e~f~~~i~~~~-----~~~~~~Y--- 508 (627)
...++|+||+ |+|+.+.|....|..... +.+ .+|.+...|..+...+. .+.+++|
T Consensus 7 g~ii~l~Gp~GsGKSTl~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (205)
T 3tr0_A 7 ANLFIISAPSGAGKTSLVRALVKALAEIKISISHTTRPKRPGDQEGVDYFFIDETRFQAMVKEGAFLEHATIYERHYGTE 86 (205)
T ss_dssp CCEEEEECCTTSCHHHHHHHHHHHSSSEEECCCEECSCCCTTCCBTTTBEECCHHHHHHHHHHTCEEEEEEETTEEEEEE
T ss_pred CcEEEEECcCCCCHHHHHHHHHhhCCCeEEeceeccCCCchhHhcCceEEeccHHHHHHHHhcCcEEeeeeeecccccch
Confidence 4679999999 999999998877732221 111 14778888888764332 2346777
Q ss_pred --hHHhHHhCCCcEEEecC-Cce-eccccCCCCceeEEEEcCCCcccC-----C--CCCHHHHHHHHHHHHHHHHHhcCc
Q psy9827 509 --QGKDSMYQGKDSMYQGK-ESM-YQGKDSMYQGKDSMYQGKDSMYQG-----K--DIKKEVKIKLFEQSQKLEKVWSHV 577 (627)
Q Consensus 509 --~V~~v~~~gk~ciLdi~-~~l-~~~~~~~~P~~~vIFI~ppsl~~~-----~--~~~e~~~~~~~~~~~~~e~~~~~~ 577 (627)
.+++++++|++|++|++ ..+ ..+.....+. +||+.||+.+.+ + +.+++++++++.++. .+.++.+.
T Consensus 87 ~~~i~~~l~~g~~vi~d~~~~~~~~~~~~~~~~~--~v~~~~~~~e~l~~Rl~~R~~~~~~~i~~rl~~~~-~~~~~~~~ 163 (205)
T 3tr0_A 87 KDWVLRQLKAGRDVLLEIDWQGARQIRELFPPAL--SIFILPPSIEALRERLIKRRQDDTAIIEQRLALAR-EEMAHYKE 163 (205)
T ss_dssp HHHHHHHHHTTCEEEEECCHHHHHHHHHHCTTCE--EEEEECSCHHHHHHHHHTCTTSCSSTHHHHHHHHH-HHHTTGGG
T ss_pred HHHHHHHHHcCCeEEEEECHHHHHHHHHhCCCcE--EEEEECcCHHHHHHHHHHhCCCCHHHHHHHHHHHH-HHHhcccC
Confidence 78899999999999999 444 2221123346 899999984332 2 334444666666653 35567788
Q ss_pred ccEEEECCCHHHHHHHHHHHHHhhC
Q psy9827 578 FTGTITLSGVDVWYRKTRELIEKQQ 602 (627)
Q Consensus 578 fd~vi~n~~l~~~~~~l~~~i~~~~ 602 (627)
||+||+|+++++++++|..+|....
T Consensus 164 ~d~vi~n~~~~~~~~~l~~~i~~~~ 188 (205)
T 3tr0_A 164 FDYLVVNDNFDQAVQNLIHIISAER 188 (205)
T ss_dssp CSEEEECSSHHHHHHHHHHHHHHHT
T ss_pred CCEEEECCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999997643
No 177
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=99.00 E-value=2.7e-09 Score=89.58 Aligned_cols=70 Identities=26% Similarity=0.442 Sum_probs=60.2
Q ss_pred CceeEEEEccCCCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEeCCcc
Q psy9827 60 GSVGIRLTGGNKVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQNRRDE 133 (627)
Q Consensus 60 g~lG~~i~g~~~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r~~~~ 133 (627)
..|||.+. .|++|..|.++|||+++| |++||+|++|||.++.+++..++...+...+..+.|++.|++..
T Consensus 15 ~~~g~~~~----~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~g~~ 85 (92)
T 3cyy_A 15 EEYGLRLA----SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQRDERA 85 (92)
T ss_dssp SCCCEEEE----EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEEC----
T ss_pred CCCCEEEe----CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEeCCce
Confidence 37898876 479999999999999999 99999999999999999999998888887778999999886644
No 178
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.00 E-value=6.5e-10 Score=99.06 Aligned_cols=80 Identities=16% Similarity=0.225 Sum_probs=69.1
Q ss_pred CceEEEeccC-CceeEEEEccCCCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhc--CCCeeEE
Q psy9827 50 DPRFITFQKE-GSVGIRLTGGNKVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLS--LQDQIHL 125 (627)
Q Consensus 50 ~~r~v~l~k~-g~lG~~i~g~~~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~--~g~~V~L 125 (627)
....+.+.+. .+|||++.+. ..+++|..|.+||||+++| |++||+|++|||.++.+.++.++...++. .++.|+|
T Consensus 27 ~~~~~~l~k~~~glG~~i~~~-~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~~v~l 105 (126)
T 1wif_A 27 KVIQTKLTVGNLGLGLVVIQN-GPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIGTVLQI 105 (126)
T ss_dssp CEEEEEEECCTTCCCCCEEEE-TTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSCEEEE
T ss_pred ceEEEEEecCCceEeEEEEcC-CCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEE
Confidence 3445566665 5899998874 4579999999999999999 99999999999999999999999999885 6899999
Q ss_pred EEEeC
Q psy9827 126 IVQNR 130 (627)
Q Consensus 126 ~v~r~ 130 (627)
+|.|+
T Consensus 106 ~V~R~ 110 (126)
T 1wif_A 106 KAYRG 110 (126)
T ss_dssp EEESS
T ss_pred EEEEC
Confidence 99986
No 179
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=98.99 E-value=1.4e-09 Score=89.22 Aligned_cols=78 Identities=15% Similarity=0.276 Sum_probs=63.4
Q ss_pred ccEEEEEeecCCCCCeeeeeCCcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEEEE
Q psy9827 198 QTLRVQLSKSRKKDDFGIILGNKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLT 277 (627)
Q Consensus 198 ~~~~V~L~k~~~~~~~gi~~~~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~l~ 277 (627)
.+..|+|.|... .+|||....+. |.+|.+| ++|..+||++||+|++|||+++.++++++++++|+.++..++|+
T Consensus 4 ~~r~v~l~k~~~-g~~Gf~i~~g~-I~~v~~g----spA~~aGl~~GD~Il~VNG~~v~~~~~~evv~llr~~g~~V~L~ 77 (82)
T 1r6j_A 4 DPRTITMHKDST-GHVGFIFKNGK-ITSIVKD----SSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTIT 77 (82)
T ss_dssp CCEEEEEECCTT-SCCCEEEETTE-EEEECTT----SHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEEE
T ss_pred ceEEEEEEECCC-CCeEEEEECCE-EEEecCC----CHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEEEE
Confidence 457888888643 34666665554 7889876 45556679999999999999999999999999999989999999
Q ss_pred EEeC
Q psy9827 278 IRRE 281 (627)
Q Consensus 278 V~r~ 281 (627)
|.+.
T Consensus 78 v~p~ 81 (82)
T 1r6j_A 78 IMPA 81 (82)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 9873
No 180
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.99 E-value=3.7e-10 Score=98.60 Aligned_cols=81 Identities=31% Similarity=0.473 Sum_probs=68.2
Q ss_pred CCceEEEeccC-CceeEEEEccCCCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCC-CeeEEE
Q psy9827 49 PDPRFITFQKE-GSVGIRLTGGNKVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQ-DQIHLI 126 (627)
Q Consensus 49 ~~~r~v~l~k~-g~lG~~i~g~~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g-~~V~L~ 126 (627)
..+|.|.+.+. ++|||++.+. .+++|..|.++|||+++||++||+|++|||.++.++++.++...++..+ ..+.|+
T Consensus 14 ~~~r~v~l~~~~~~~G~~l~~~--~~v~V~~V~~~spA~~aGL~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~~v~l~ 91 (111)
T 1vae_A 14 SPPRGIHFTVEEGDLGFTLRGN--TPVQVHFLDPHCSASLAGAKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEVEMK 91 (111)
T ss_dssp CCCCCCCEECCSSCCSCCEESS--SSCEECCCCTTSSHHHHHCCTTCEEEEETTEECSSCCHHHHHHHHHHTTTSEECEE
T ss_pred CCCeEEEEEcCCCcccEEEeCC--CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEE
Confidence 35677777775 5899999765 4789999999999999999999999999999999888888888887544 469999
Q ss_pred EEeCC
Q psy9827 127 VQNRR 131 (627)
Q Consensus 127 v~r~~ 131 (627)
|.+..
T Consensus 92 V~~~~ 96 (111)
T 1vae_A 92 VVSLL 96 (111)
T ss_dssp EECEE
T ss_pred EEecC
Confidence 88643
No 181
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.99 E-value=1.8e-09 Score=90.33 Aligned_cols=70 Identities=24% Similarity=0.330 Sum_probs=59.7
Q ss_pred ceeEEEEccCCCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHh--cCCCeeEEEEEeCC
Q psy9827 61 SVGIRLTGGNKVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLL--SLQDQIHLIVQNRR 131 (627)
Q Consensus 61 ~lG~~i~g~~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~--~~g~~V~L~v~r~~ 131 (627)
+|||++... ..|++|..|.++|||+++||++||+|++|||.++.+.+..++...+. ..+..+.|+|.|++
T Consensus 18 ~lG~~~~~~-~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g 89 (90)
T 2eaq_A 18 DFGFTIKWD-IPGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGHLVMDVRRYG 89 (90)
T ss_dssp CCSEEEEEE-TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECCTTCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred cccEEEEec-CCCEEEEEECCCChHHHcCCCCCCEEEEECCEEccCCCHHHHHHHHHhcCCCCEEEEEEEeCC
Confidence 799998754 45899999999999999999999999999999997667777766665 36889999998753
No 182
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=98.98 E-value=1.9e-09 Score=90.17 Aligned_cols=84 Identities=14% Similarity=0.215 Sum_probs=69.7
Q ss_pred CCccEEEEEeecCCCCCeeeeeC---CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCC
Q psy9827 196 EPQTLRVQLSKSRKKDDFGIILG---NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKE 272 (627)
Q Consensus 196 ~~~~~~V~L~k~~~~~~~gi~~~---~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~ 272 (627)
.+.+..|.|.++..+.||.+..+ .|++|..|.++ ++|..+||++||+|++|||+++.+++++++..+|+..+.
T Consensus 2 ~~~~r~v~l~k~~~g~G~~~~~~~~~~gv~V~~V~~~----spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 77 (90)
T 2he4_A 2 MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPG----SPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKARED 77 (90)
T ss_dssp TTCCEEEEEECBTTBCCEEEEECSSSSSEEEEEECTT----SHHHHHTCCTTCEEEEETTEECTTSCHHHHHHHHTTSSS
T ss_pred CCCcEEEEEEECCCCccEEEEccCCCCCEEEEEECCC----ChHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 35667889998876666666554 38999999887 455667899999999999999999999999999999888
Q ss_pred eEEEEEEeCCC
Q psy9827 273 KLSLTIRREVP 283 (627)
Q Consensus 273 ~v~l~V~r~~~ 283 (627)
.+.|.|.|...
T Consensus 78 ~v~l~v~r~~~ 88 (90)
T 2he4_A 78 EARLLVVGPST 88 (90)
T ss_dssp EEEEEEECCCC
T ss_pred cEEEEEEccCC
Confidence 99999998653
No 183
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.98 E-value=2.5e-09 Score=90.53 Aligned_cols=77 Identities=23% Similarity=0.272 Sum_probs=64.4
Q ss_pred eEEEeccC-CceeEEEEccCCCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhc---CCCeeEEEE
Q psy9827 52 RFITFQKE-GSVGIRLTGGNKVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLS---LQDQIHLIV 127 (627)
Q Consensus 52 r~v~l~k~-g~lG~~i~g~~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~---~g~~V~L~v 127 (627)
+.+.+... .++||.+... ..+++|..|.+||||++|||++||+|++|||.++...+..++...+.. .+..|.|.|
T Consensus 19 ~~l~l~~~~~g~G~~l~~~-~~~~~I~~V~~gSpA~~AGL~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v~LLV 97 (101)
T 3qik_A 19 KRLLILPQEEDYGFDIEEK-NKAVVVKSVQRGSLAEVAGLQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRPLRLLV 97 (101)
T ss_dssp EEEEECCCSSSSSEEEEEE-TTEEEEEEECTTSHHHHHTCCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CeEEEEeCCCcccEEEEcc-CCCeEEEEECCCCHHHHcCCCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeEEEEE
Confidence 44555554 5899999874 457899999999999999999999999999999987778888777765 589999988
Q ss_pred Ee
Q psy9827 128 QN 129 (627)
Q Consensus 128 ~r 129 (627)
..
T Consensus 98 ~~ 99 (101)
T 3qik_A 98 AT 99 (101)
T ss_dssp EC
T ss_pred ec
Confidence 74
No 184
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.98 E-value=9e-10 Score=98.55 Aligned_cols=90 Identities=21% Similarity=0.349 Sum_probs=75.9
Q ss_pred CCCceEEEeccC--CceeEEEEccCC-CCEEEEEeCCCChhhhcCC-CCCCEEEEECCEeCCCCCHHHHHHHHhc-CCCe
Q psy9827 48 EPDPRFITFQKE--GSVGIRLTGGNK-VGIFVTAVQPGSPASLQGL-QPGDKILKVNDMDMKGITREEAVLFLLS-LQDQ 122 (627)
Q Consensus 48 ~~~~r~v~l~k~--g~lG~~i~g~~~-~gi~V~~V~~gspA~~aGL-~~GD~Il~VnG~~v~~~~~~~~~~~l~~-~g~~ 122 (627)
.+..+.+.+.+. ++|||++.+..+ .+++|..|.+||||+++|| ++||+|++|||.++.+++..++...++. .+..
T Consensus 6 ~~~~~~v~l~~~~~~glG~~~~~~~~~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~ 85 (127)
T 1b8q_A 6 EPNVISVRLFKRKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASET 85 (127)
T ss_dssp CCCSEEEEEECTTTSCCSCCEEECTTSSCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHSCCSSC
T ss_pred CCceEEEEEEeCCCCcEeEEEEecCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCe
Confidence 456788888765 489999988643 5899999999999999997 9999999999999999988888888874 5689
Q ss_pred eEEEEEeCCccccee
Q psy9827 123 IHLIVQNRRDEYEHV 137 (627)
Q Consensus 123 V~L~v~r~~~~~~~~ 137 (627)
+.|++.|++......
T Consensus 86 v~l~v~R~g~~~~~~ 100 (127)
T 1b8q_A 86 HVVLILRGPEGFTTH 100 (127)
T ss_dssp EEEEEECCCCSEEEC
T ss_pred EEEEEEeCCceEEEE
Confidence 999999877654433
No 185
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.98 E-value=1.3e-09 Score=89.71 Aligned_cols=81 Identities=20% Similarity=0.231 Sum_probs=66.8
Q ss_pred ccEEEEEeecCCCCCeeeeeCCcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEEEE
Q psy9827 198 QTLRVQLSKSRKKDDFGIILGNKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLT 277 (627)
Q Consensus 198 ~~~~V~L~k~~~~~~~gi~~~~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~l~ 277 (627)
.+..|.|.++..+.+|.+....+++|..|.++ ++|..+||++||+|++|||+++.+++++++..+++..++.++|+
T Consensus 2 ~~r~v~l~~~~~g~G~~~~~~~~~~V~~V~~~----spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~ 77 (83)
T 2kv8_A 2 RVRSVEVARGRAGYGFTLSGQAPCVLSCVMRG----SPADFVGLRAGDQILAVNEINVKKASHEDVVKLIGKCSGVLHMV 77 (83)
T ss_dssp CEEEEEECCCSSCCSCBCCCSSSCBCCBCCTT----STTTTTTCCTTCEEEEETTEECSSCCHHHHHHHHTTCSSCEEEE
T ss_pred CcEEEEEEeCCCcccEEEEcCCCeEEEEeCCC----ChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEE
Confidence 45678888876555555555678999999887 45566789999999999999999999999999998887889999
Q ss_pred EEeCC
Q psy9827 278 IRREV 282 (627)
Q Consensus 278 V~r~~ 282 (627)
|.|+.
T Consensus 78 v~R~~ 82 (83)
T 2kv8_A 78 IAEGV 82 (83)
T ss_dssp EECCC
T ss_pred EEcCC
Confidence 98863
No 186
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=98.98 E-value=1.6e-09 Score=90.87 Aligned_cols=83 Identities=19% Similarity=0.296 Sum_probs=68.6
Q ss_pred ccEEEEEeecCCCCCeeeeeCCcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEEEE
Q psy9827 198 QTLRVQLSKSRKKDDFGIILGNKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLT 277 (627)
Q Consensus 198 ~~~~V~L~k~~~~~~~gi~~~~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~l~ 277 (627)
....|.|.++..+.||.+....+++|..|.++ ++|..+||++||+|++|||+++.++++.++..+++..++.+.|+
T Consensus 3 ~~r~v~l~~~~~g~G~~l~~~~~~~V~~V~~~----spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~ 78 (91)
T 2f5y_A 3 RYRQITIPRGKDGFGFTICCDSPVRVQAVDSG----GPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILL 78 (91)
T ss_dssp EEEEEEEECBTTBTSEEEECSSSCEEEEECTT----SHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEE
T ss_pred ceEEEEEEeCCCCccEEEecCCCEEEEEECCC----CHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 45678888876666666666678999999887 45666789999999999999999999999999999888899999
Q ss_pred EEeCCCC
Q psy9827 278 IRREVPR 284 (627)
Q Consensus 278 V~r~~~~ 284 (627)
|.|+...
T Consensus 79 v~R~~~~ 85 (91)
T 2f5y_A 79 VWRMVPQ 85 (91)
T ss_dssp EEECC--
T ss_pred EEeCCCC
Confidence 9997643
No 187
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=98.98 E-value=4.6e-10 Score=116.75 Aligned_cols=127 Identities=22% Similarity=0.190 Sum_probs=90.2
Q ss_pred cccCC-CCCCCCC-------CCceeeeecccccCCCC---CccccccCCCCceEEE----ec-----cCCceeEEEEccC
Q psy9827 11 FQKEG-SVGIRLT-------GGNKVGIFVTAVQPGSP---DLFSIFFVEPDPRFIT----FQ-----KEGSVGIRLTGGN 70 (627)
Q Consensus 11 ~~~~~-~~~~~~~-------~g~~iGin~~ai~~~~~---d~~~~~~~~~~~r~v~----l~-----k~g~lG~~i~g~~ 70 (627)
+.+++ ++|.++| .|++|||+ ++.....+ ...+++|++|...... +. ..+.||+.+....
T Consensus 153 ~i~~d~~~~~G~SGGPl~~~~G~vvGI~-s~~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~g~~~~~~lGi~~~~~~ 231 (318)
T 1te0_A 153 FLQTDASINHGNSGGALVNSLGELMGIN-TLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIA 231 (318)
T ss_dssp SEEESSCCCTTTTTSEEECTTCCEEEEE-ECCSSSSSSCCSCCSCEEEEEHHHHHHHHHHHHHHSSCCCEECCEEEEECS
T ss_pred EEEECCCCCCCCCcCceECCCCeEEEEE-eeeeccCCccccccceEEeccHHHHHHHHHHHHHcCCcccccceeEeeecc
Confidence 34444 7888877 47789999 66554322 3456777777443221 11 1357999887631
Q ss_pred -----------CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEeCCcccceee
Q psy9827 71 -----------KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQNRRDEYEHVV 138 (627)
Q Consensus 71 -----------~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r~~~~~~~~v 138 (627)
..|++|..|.++|||+++||++||+|++|||.++.++.+......-...++.+.|+|.|++......+
T Consensus 232 ~~~~~~~g~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v 310 (318)
T 1te0_A 232 PLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQV 310 (318)
T ss_dssp CCCSSSSCSSSCCCEEEEEECTTSTTTTTCCCTTCCEEEETTEECCCHHHHHHHHHTSCTTCEEEEEEESSSCEEEEEE
T ss_pred hhHHHhccCCCCCcEEEEEeCCCChHHHCCCCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEE
Confidence 36899999999999999999999999999999998875444332222578999999999876655444
No 188
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=98.97 E-value=1.3e-09 Score=96.48 Aligned_cols=86 Identities=19% Similarity=0.261 Sum_probs=67.2
Q ss_pred CCccEEEEEeecCC-CCCeeeeeC-------CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHH
Q psy9827 196 EPQTLRVQLSKSRK-KDDFGIILG-------NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLI 267 (627)
Q Consensus 196 ~~~~~~V~L~k~~~-~~~~gi~~~-------~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l 267 (627)
.+..+.|.|.|+.. +.||.+..+ .+++|..|.++ ++|++.++|++||+|++|||+++.++++.+++.++
T Consensus 22 ~~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~~~~V~~V~~~---spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l 98 (120)
T 2iwo_A 22 SMGLRTVEMKKGPTDSLGISIAGGVGSPLGDVPIFIAMMHPT---GVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLL 98 (120)
T ss_dssp ---CEEEEEEC----CCCEEEEEEEEETTEEEEEEEEEECTT---SHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHH
T ss_pred CCCcEEEEEEcCCCCCCCEEEecccCCCCCCCCEEEEEECCC---CHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 44567888988753 566666654 27999999987 34444569999999999999999999999999999
Q ss_pred HcCCCeEEEEEEeCCCC
Q psy9827 268 DSSKEKLSLTIRREVPR 284 (627)
Q Consensus 268 ~~~~~~v~l~V~r~~~~ 284 (627)
+..++.++|+|.|++..
T Consensus 99 ~~~~~~v~l~v~r~g~~ 115 (120)
T 2iwo_A 99 KNASGSIEMQVVAGGDV 115 (120)
T ss_dssp HHCCSEEEEEEECCTTS
T ss_pred HcCCCeEEEEEEECCcc
Confidence 99999999999997653
No 189
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.97 E-value=4.2e-09 Score=91.62 Aligned_cols=83 Identities=19% Similarity=0.213 Sum_probs=67.5
Q ss_pred CccEEEEEeecCCCCCeeeeeC-CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcC--CCe
Q psy9827 197 PQTLRVQLSKSRKKDDFGIILG-NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS--KEK 273 (627)
Q Consensus 197 ~~~~~V~L~k~~~~~~~gi~~~-~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~--~~~ 273 (627)
+..++|.|.|+..+.+|.+..+ .|.+|.+|.+ ++..++|++||+|++|||+++.+++|+|++.+|+.+ +..
T Consensus 11 ~~~~~V~L~Kg~~G~GFsI~~~~~g~~V~~I~~------~~~~aGL~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~~ 84 (113)
T 3soe_A 11 GLLVTIPLIKGPKGFGFAIADSPTGQKVKMILD------SQWCQGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPVGAD 84 (113)
T ss_dssp CEEEEEEEECBTTBSSEEEEEETTEEEEEEESC------GGGSTTCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTCE
T ss_pred CCEEEEEEEECCCcccEEEeCCCCCcEEEEecC------hHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCE
Confidence 3567889999866666666443 4788999964 356789999999999999999999999999999986 569
Q ss_pred EEEEEEeCCCCC
Q psy9827 274 LSLTIRREVPRP 285 (627)
Q Consensus 274 v~l~V~r~~~~~ 285 (627)
++|+|.|++...
T Consensus 85 v~L~V~R~g~~~ 96 (113)
T 3soe_A 85 VPLLILRGGPPS 96 (113)
T ss_dssp EEEEEEESSCC-
T ss_pred EEEEEEECCccC
Confidence 999999987643
No 190
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.96 E-value=3.7e-09 Score=94.68 Aligned_cols=87 Identities=33% Similarity=0.515 Sum_probs=69.5
Q ss_pred CceEEEeccC--CceeEEEEccCC--CCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEE
Q psy9827 50 DPRFITFQKE--GSVGIRLTGGNK--VGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHL 125 (627)
Q Consensus 50 ~~r~v~l~k~--g~lG~~i~g~~~--~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L 125 (627)
..+.+.+... +.|||++.++.. .|++|..|.+||||+++||++||+|++|||.++.++++.+++..++. +..+.|
T Consensus 20 ~~~~v~v~~~~~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~v~l 98 (128)
T 1uf1_A 20 DEKKVNLVLGDGRSLGLTIRGGAEYGLGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILHDEAVRLLKS-SRHLIL 98 (128)
T ss_dssp SEEEEEEECCSSCCCCEEEECCTTTTCCCEEEEECTTCHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHTT-CSEEEE
T ss_pred cEEEEEEEECCCCccCEEEECcccCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHhc-CCeEEE
Confidence 3444554432 579999988642 48999999999999999999999999999999999999766666655 579999
Q ss_pred EEEeCCccccee
Q psy9827 126 IVQNRRDEYEHV 137 (627)
Q Consensus 126 ~v~r~~~~~~~~ 137 (627)
+|.|++......
T Consensus 99 ~v~R~g~~~~~~ 110 (128)
T 1uf1_A 99 TVKDVGRLPHAR 110 (128)
T ss_dssp EEECCSCCSSCS
T ss_pred EEEECCcccccc
Confidence 999877654433
No 191
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=98.96 E-value=6.4e-10 Score=115.96 Aligned_cols=128 Identities=16% Similarity=0.197 Sum_probs=91.2
Q ss_pred ccccCC-CCCCCCC-------CCceeeeecccccCCC-------CCccccccCCCCceEEE----ecc-----CCceeEE
Q psy9827 10 TFQKEG-SVGIRLT-------GGNKVGIFVTAVQPGS-------PDLFSIFFVEPDPRFIT----FQK-----EGSVGIR 65 (627)
Q Consensus 10 ~~~~~~-~~~~~~~-------~g~~iGin~~ai~~~~-------~d~~~~~~~~~~~r~v~----l~k-----~g~lG~~ 65 (627)
.+.+++ ++|.++| .|++|||+ ++..... +...+++|++|...... +.+ .++||+.
T Consensus 156 ~~i~~d~~~~~G~SGGPlv~~~G~vvGI~-s~~~~~~~~~~~~~~~~~g~~~aIP~~~v~~~l~~l~~~g~~~~~~lGi~ 234 (324)
T 1y8t_A 156 DAIQTDAAINPGNSGGALVNMNAQLVGVN-SAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQ 234 (324)
T ss_dssp EEEEECSCCCTTCTTEEEECTTSEEEEEE-EEECCC-------CCCCSSCEEEEEHHHHHHHHHHHHHHSCCCCEECCEE
T ss_pred CEEEEcCCCCCCCccCcEECCCCeEEEEE-eeecccCcccccccccccceEEecCHHHHHHHHHHHHHcCCccccccceE
Confidence 344444 7888877 47788999 6665432 23457778888543221 111 3479999
Q ss_pred EEcc-CCCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEe-CCcccceee
Q psy9827 66 LTGG-NKVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQN-RRDEYEHVV 138 (627)
Q Consensus 66 i~g~-~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r-~~~~~~~~v 138 (627)
+... ...|++|..|.++|||+++||++||+|++|||.++.++.+..........++.|+|+|.| ++......+
T Consensus 235 ~~~~~~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R~~g~~~~~~v 309 (324)
T 1y8t_A 235 VTNDKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQV 309 (324)
T ss_dssp EESCSSSSSEEEEEECTTSTTTTTTCCTTCEEEEETTEECCSHHHHHHHHHTSCTTCEEEEEEECSSCCEEEEEE
T ss_pred eeeccCCCceEEEEECCCChHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCCCEEEEEE
Confidence 8764 356899999999999999999999999999999999875544433323578999999998 766544443
No 192
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum}
Probab=98.95 E-value=1.3e-09 Score=107.72 Aligned_cols=148 Identities=15% Similarity=0.121 Sum_probs=95.8
Q ss_pred CCceEEEeCcc---HHHHHHHHh-hhCCCCccc-------CCC-------CCCCCHHHHHHHHhcccc-----cCCcee-
Q psy9827 453 FIRPVVLFGPV---ADLARDKLL-KDFPDKFSA-------PRK-------FNFILWATIKDTAMYQSS-----KEPGMY- 508 (627)
Q Consensus 453 ~~RpvVl~Gp~---k~~l~~~Ll-~~~p~~f~~-------~~~-------~~Fvs~e~f~~~i~~~~~-----~~~~~Y- 508 (627)
..+.++|+||+ |+|+.+.|. ...|..+.. +.. .+|++.+.|..+...+.+ +.+++|
T Consensus 26 ~G~ii~l~Gp~GsGKSTl~~~L~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (231)
T 3lnc_A 26 VGVILVLSSPSGCGKTTVANKLLEKQKNNIVKSVSVTTRAARKGEKEGKDYYFVDREEFLRLCSNGEIIEHAEVFGNFYG 105 (231)
T ss_dssp CCCEEEEECSCC----CHHHHHHC----CEEECCCEESSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEETTEEEE
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhcCCCCcccccccCCCCCCccccCCCeEEEecHHHhhhhhhcCceehhhhhccccCC
Confidence 35789999999 999999998 766542221 111 258889999988765432 357777
Q ss_pred ----hHHhHHhCCCcEEEecC-Cce--eccccCCC-CceeEEEEcCCCcccC-----CC--CCHHHHHHHHHHHHHHHHH
Q psy9827 509 ----QGKDSMYQGKDSMYQGK-ESM--YQGKDSMY-QGKDSMYQGKDSMYQG-----KD--IKKEVKIKLFEQSQKLEKV 573 (627)
Q Consensus 509 ----~V~~v~~~gk~ciLdi~-~~l--~~~~~~~~-P~~~vIFI~ppsl~~~-----~~--~~e~~~~~~~~~~~~~e~~ 573 (627)
.+++++++|+.|++|++ ... .. +.+ |...+||+.||+.+.+ .| .+++++++++++... +.+
T Consensus 106 ~~~~~i~~~~~~~~~vild~~~~g~~~~~---~~~~~~~~~v~v~~~~~~~l~~Rl~~R~~~~~~~i~~rl~~~~~-~~~ 181 (231)
T 3lnc_A 106 VPRKNLEDNVDKGVSTLLVIDWQGAFKFM---EMMREHVVSIFIMPPSMEELRRRLCGRRADDSEVVEARLKGAAF-EIS 181 (231)
T ss_dssp EECTTHHHHHHHTCEEEEECCHHHHHHHH---HHSGGGEEEEEEECSCHHHHHHC--------------CHHHHHH-HHT
T ss_pred CCHHHHHHHHHcCCeEEEEcCHHHHHHHH---HhcCCCeEEEEEECCcHHHHHHHHHHcCCCCHHHHHHHHHHHHH-HHh
Confidence 69999999999999999 333 33 233 5434899999984322 22 344445555555433 445
Q ss_pred hcCcccEEEECCCHHHHHHHHHHHHHhhCCC
Q psy9827 574 WSHVFTGTITLSGVDVWYRKTRELIEKQQSS 604 (627)
Q Consensus 574 ~~~~fd~vi~n~~l~~~~~~l~~~i~~~~~~ 604 (627)
+.+.||+||+|+++++++++|..+|.....+
T Consensus 182 ~~~~~d~vI~n~~~e~~~~~l~~~i~~~~~~ 212 (231)
T 3lnc_A 182 HCEAYDYVIVNEDIEETADRISNILRAEQMK 212 (231)
T ss_dssp TGGGSSEEEECSSHHHHHHHHHHHHHHHHTB
T ss_pred hhcCCeEEEECcCHHHHHHHHHHHHHHHhhc
Confidence 6778999999999999999999999876544
No 193
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.95 E-value=3.4e-09 Score=91.78 Aligned_cols=87 Identities=20% Similarity=0.310 Sum_probs=69.7
Q ss_pred CCccEEEEEeecCCCCCeeeeeC------------CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHH
Q psy9827 196 EPQTLRVQLSKSRKKDDFGIILG------------NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEA 263 (627)
Q Consensus 196 ~~~~~~V~L~k~~~~~~~gi~~~------------~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~ 263 (627)
....+.|.|.|...+.+|.+..+ .+++|..|.+++ +|++.++|++||+|++|||+++.++++.++
T Consensus 6 ~~~~~~v~l~k~~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~s---pA~~aggL~~GD~Il~vng~~v~~~~~~~~ 82 (107)
T 1uhp_A 6 SGKSLTLVLHRDSGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSG---PAAKEGGLQIHDRIIEVNGRDLSRATHDQA 82 (107)
T ss_dssp SSEEEEEEECCSSSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSS---HHHHTTCCCSSCEEEEETTEECTTCCHHHH
T ss_pred CcEEEEEEEEeCCCccCEEEEcCCCCcccccccCCCCEEEEEeCCCC---hHHHcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 45677888988755555555542 389999998873 333344999999999999999999999999
Q ss_pred HHHHHcCCCeEEEEEEeCCCCC
Q psy9827 264 RKLIDSSKEKLSLTIRREVPRP 285 (627)
Q Consensus 264 ~~~l~~~~~~v~l~V~r~~~~~ 285 (627)
+.+++..++.+.|+|.|....+
T Consensus 83 ~~~~~~~~~~v~l~v~R~~~~~ 104 (107)
T 1uhp_A 83 VEAFKTAKEPIVVQVLRRTSGP 104 (107)
T ss_dssp HHHHHHCCSSEEEEEEECCSSC
T ss_pred HHHHHcCCCcEEEEEEeCCCCC
Confidence 9999998899999999976543
No 194
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.95 E-value=3.5e-09 Score=94.34 Aligned_cols=83 Identities=23% Similarity=0.516 Sum_probs=66.8
Q ss_pred eEEEeccC---CceeEEEEccCC----CCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhc-CCCe
Q psy9827 52 RFITFQKE---GSVGIRLTGGNK----VGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLS-LQDQ 122 (627)
Q Consensus 52 r~v~l~k~---g~lG~~i~g~~~----~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~-~g~~ 122 (627)
+.+.+.+. .+|||++..... .|++|..|.++|||+++| |++||+|++|||.++.+ ..++...++. .+..
T Consensus 21 ~~~~~~~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~ 98 (124)
T 1wh1_A 21 EEVDLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN--REEAVALLTSEENKN 98 (124)
T ss_dssp CCBCCCCSSTTCCCCEEEECCCCCSSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCS--HHHHHHHHTCSSCCS
T ss_pred EEEEEEecCCCCcccEEEEecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC--HHHHHHHHHhCCCCE
Confidence 44455444 379999998753 689999999999999999 99999999999999985 5566666664 4789
Q ss_pred eEEEEEeCCcccce
Q psy9827 123 IHLIVQNRRDEYEH 136 (627)
Q Consensus 123 V~L~v~r~~~~~~~ 136 (627)
|.|+|.|+...+..
T Consensus 99 v~l~v~R~g~~~~~ 112 (124)
T 1wh1_A 99 FSLLIARPELQLDE 112 (124)
T ss_dssp CCEEEEECSSCCCC
T ss_pred EEEEEEECCEEeec
Confidence 99999997765443
No 195
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=98.93 E-value=2.4e-09 Score=94.34 Aligned_cols=84 Identities=23% Similarity=0.378 Sum_probs=69.0
Q ss_pred CCccEEEEEeecCCCCCeeeeeC-------CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHH
Q psy9827 196 EPQTLRVQLSKSRKKDDFGIILG-------NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLI 267 (627)
Q Consensus 196 ~~~~~~V~L~k~~~~~~~gi~~~-------~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l 267 (627)
.+....|+|.|...+.||.+..+ .|++|..|.+++ +|..+| |++||+|++|||+++.++++.+++.++
T Consensus 23 ~~~~~~v~L~k~~~glGf~l~~g~~~~~~~~gv~V~~V~~~s----pA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l 98 (117)
T 2fne_A 23 MPQCKSITLERGPDGLGFSIVGGYGSPHGDLPIYVKTVFAKG----AASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAIL 98 (117)
T ss_dssp CCEEEEEEECCBTTBTSEEEEEEEEETTEEEEEEEEEECTTS----HHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCccEEEEEEeCCCcccEEEecccCCCCCCCCEEEEEECCCC----hHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 45677899998876666666553 379999999873 444445 999999999999999999999999999
Q ss_pred HcCCCeEEEEEEeCCC
Q psy9827 268 DSSKEKLSLTIRREVP 283 (627)
Q Consensus 268 ~~~~~~v~l~V~r~~~ 283 (627)
+..++.++|+|.|++.
T Consensus 99 ~~~~~~v~l~v~R~g~ 114 (117)
T 2fne_A 99 KRTKGTVTLMVLSSDE 114 (117)
T ss_dssp HHCCSSEEEEEEECSC
T ss_pred HcCCCeEEEEEEeCCc
Confidence 9988889999999754
No 196
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=98.92 E-value=2.6e-09 Score=89.07 Aligned_cols=81 Identities=17% Similarity=0.229 Sum_probs=64.4
Q ss_pred EEEEEeecC-CCCCeeeeeC--CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEEE
Q psy9827 200 LRVQLSKSR-KKDDFGIILG--NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSL 276 (627)
Q Consensus 200 ~~V~L~k~~-~~~~~gi~~~--~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~l 276 (627)
..|.|.|.. .+.||.+... .+++|.+|.+++ +|++.++|++||+|++|||+++.+++++++.++|+...+.++|
T Consensus 3 r~V~l~K~~~~~lG~~i~~~~~~~~~I~~V~~gs---pA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~v~l 79 (88)
T 1kwa_A 3 RLVQFQKNTDEPMGITLKMNELNHCIVARIMHGG---MIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITF 79 (88)
T ss_dssp EEEEEEECSSSCCCEEEECSCGGGEEEEEECTTS---HHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCCEEEEE
T ss_pred EEEEEEeCCCCceeEEEEeCCCCCEEEEEECCCC---HHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEEE
Confidence 457788764 4445555442 479999999873 3444489999999999999999999999999999988779999
Q ss_pred EEEeCCC
Q psy9827 277 TIRREVP 283 (627)
Q Consensus 277 ~V~r~~~ 283 (627)
+|.|+..
T Consensus 80 ~v~r~~~ 86 (88)
T 1kwa_A 80 KIVPSYR 86 (88)
T ss_dssp EEECCCC
T ss_pred EEECCcC
Confidence 9988653
No 197
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.92 E-value=4.3e-09 Score=85.87 Aligned_cols=67 Identities=27% Similarity=0.461 Sum_probs=59.3
Q ss_pred CceeEEEEccCCCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEeC
Q psy9827 60 GSVGIRLTGGNKVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQNR 130 (627)
Q Consensus 60 g~lG~~i~g~~~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r~ 130 (627)
..|||.+. .|++|..|.++|||+++| |++||+|++|||.++.++++.++...+...+..+.|++.|+
T Consensus 13 ~~~g~~~~----~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 80 (81)
T 2rcz_A 13 EEYGLRLA----SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQRD 80 (81)
T ss_dssp CCCCEEEE----EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEEEEEC-
T ss_pred CCCCEEEe----CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCeEEEEEEeC
Confidence 47898876 369999999999999999 99999999999999999999998888887777899998864
No 198
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.92 E-value=1.3e-08 Score=85.63 Aligned_cols=84 Identities=21% Similarity=0.206 Sum_probs=67.5
Q ss_pred CCccEEEEEeecCCCCCeeeeeCCcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEE
Q psy9827 196 EPQTLRVQLSKSRKKDDFGIILGNKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLS 275 (627)
Q Consensus 196 ~~~~~~V~L~k~~~~~~~gi~~~~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~ 275 (627)
......|.|.+...+.+|.+....+++|..|.++ ++|..+||++||+|++|||+++.++++.+++..++ .+..+.
T Consensus 6 ~~~~r~v~l~~~~~~~G~~l~~~~g~~V~~V~~~----spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~-~g~~v~ 80 (93)
T 2dls_A 6 SGVQRCVIIQKDQHGFGFTVSGDRIVLVQSVRPG----GAAMKAGVKEGDRIIKVNGTMVTNSSHLEVVKLIK-SGAYVA 80 (93)
T ss_dssp CCCEEEEEEECSSSSCCEEEECSSSCEEEEECSS----STTTTTTCCSSCEEEEETTEECSSSCHHHHHHHHT-SSSEEE
T ss_pred CCCCEEEEEEeCCCceeEEEeCCCCEEEEEECCC----CHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhc-CCCEEE
Confidence 3456678888876555555555679999999887 45666789999999999999999998888888887 588999
Q ss_pred EEEEeCCCC
Q psy9827 276 LTIRREVPR 284 (627)
Q Consensus 276 l~V~r~~~~ 284 (627)
|+|.|+...
T Consensus 81 l~v~R~~~~ 89 (93)
T 2dls_A 81 LTLLGSSSG 89 (93)
T ss_dssp EEEECCCCC
T ss_pred EEEEECCCC
Confidence 999997643
No 199
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.91 E-value=4e-09 Score=94.80 Aligned_cols=85 Identities=21% Similarity=0.334 Sum_probs=68.5
Q ss_pred CCccEEEEEeecCCCCCeeeeeC-------CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHH
Q psy9827 196 EPQTLRVQLSKSRKKDDFGIILG-------NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLID 268 (627)
Q Consensus 196 ~~~~~~V~L~k~~~~~~~gi~~~-------~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~ 268 (627)
....+.|.|.|...++||.+..+ .+++|..|.+| ++|++.++|++||+|++|||+++.++++++++.+|+
T Consensus 27 ~~~~~~v~l~k~~~glG~~i~gg~~~~~~~~~i~I~~V~~g---s~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~ 103 (130)
T 1i16_A 27 EATVCTVTLEKMSAGLGFSLEGGKGSLHGDKPLTINRIFKG---AASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIK 103 (130)
T ss_dssp SEEEEEEEEETTSSSTTEEEECCCCCSSSCCCCEEEEECSS---CCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHH
T ss_pred CCcEEEEEEEcCCCccCEEEecCcCCCCCCCCEEEEEECCC---CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 34567788888766666666653 26999999987 344445599999999999999999999999999999
Q ss_pred cCCC-eEEEEEEeCCC
Q psy9827 269 SSKE-KLSLTIRREVP 283 (627)
Q Consensus 269 ~~~~-~v~l~V~r~~~ 283 (627)
..++ .+.|+|.|...
T Consensus 104 ~~~~~~v~l~v~r~~~ 119 (130)
T 1i16_A 104 ALPDGPVTIVIRRKSL 119 (130)
T ss_dssp TSCSSEEEEEEEEESS
T ss_pred hCCCceEEEEEEeCCC
Confidence 9865 69999998644
No 200
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.89 E-value=1.1e-08 Score=87.73 Aligned_cols=86 Identities=12% Similarity=0.224 Sum_probs=70.6
Q ss_pred CCCccEEEEEeecCCCCCeeeeeC---CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCC
Q psy9827 195 PEPQTLRVQLSKSRKKDDFGIILG---NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSK 271 (627)
Q Consensus 195 ~~~~~~~V~L~k~~~~~~~gi~~~---~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~ 271 (627)
..+.+..|.|.+...+.+|.+... .|++|..|.++ ++|..+||++||+|++|||+++.+++++++..+++..+
T Consensus 3 ~~~~~r~v~l~k~~~g~G~~l~~~~~~~g~~V~~V~~~----spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g 78 (102)
T 2d90_A 3 SGSSGRVVVIKKGSNGYGFYLRAGPEQKGQIIKDIEPG----SPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKGG 78 (102)
T ss_dssp SCSSSEEEEEECCSSSSSCEEEECSSSSSEEEECCCTT----STTTTTTCCTTCEEEEESSCBCTTSCHHHHHHHHHHST
T ss_pred CCCCCEEEEEeeCCCCccEEEEeecCCCCEEEEEECCC----CHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 345678889998766666666543 58999999886 46667889999999999999999888999999999888
Q ss_pred CeEEEEEEeCCCC
Q psy9827 272 EKLSLTIRREVPR 284 (627)
Q Consensus 272 ~~v~l~V~r~~~~ 284 (627)
..+.|+|.|.+..
T Consensus 79 ~~v~l~v~r~~~~ 91 (102)
T 2d90_A 79 DQTTLLVLDKEAE 91 (102)
T ss_dssp TEEEEEECSTTCC
T ss_pred CEEEEEEEECCCc
Confidence 8999999886543
No 201
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=98.89 E-value=4.8e-09 Score=89.75 Aligned_cols=84 Identities=19% Similarity=0.352 Sum_probs=68.6
Q ss_pred CccEEEEEeecCCCCCeeeeeC---------CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHH
Q psy9827 197 PQTLRVQLSKSRKKDDFGIILG---------NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKL 266 (627)
Q Consensus 197 ~~~~~V~L~k~~~~~~~gi~~~---------~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~ 266 (627)
+....|.|.+...+.||.+..+ .+++|..|.++ ++|..+| |++||+|++|||+++.++++.++..+
T Consensus 6 ~~~~~v~l~~~~~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~----spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~ 81 (101)
T 2jik_A 6 VTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKEN----GAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDL 81 (101)
T ss_dssp EEEEEEEEECCTTCCCEEEEECTTSCSBTTBCCEEEEEECTT----SHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHH
T ss_pred CccEEEEEEeCCCCCCEEEeccccCCCccCCCCEEEEEECCC----CHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 4567888888776666666553 48999999887 3455566 99999999999999999999999999
Q ss_pred HHcCCCeEEEEEEeCCCC
Q psy9827 267 IDSSKEKLSLTIRREVPR 284 (627)
Q Consensus 267 l~~~~~~v~l~V~r~~~~ 284 (627)
++..+..+.|+|.|+...
T Consensus 82 ~~~~g~~v~l~v~R~~~~ 99 (101)
T 2jik_A 82 FRNAGYAVSLRVQHRLES 99 (101)
T ss_dssp HHTCCSEEEEEEEEESCC
T ss_pred HHhCCCeEEEEEEeCCCC
Confidence 998888999999987653
No 202
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=98.89 E-value=5.8e-09 Score=88.36 Aligned_cols=83 Identities=18% Similarity=0.200 Sum_probs=67.8
Q ss_pred ccEEEEEeecCCCCCeeeeeC------CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCC
Q psy9827 198 QTLRVQLSKSRKKDDFGIILG------NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSK 271 (627)
Q Consensus 198 ~~~~V~L~k~~~~~~~gi~~~------~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~ 271 (627)
.+..|.|.|...+.||.+... .|++|..|.++ ++|..+||++||+|++|||+++.+++++++..+++..+
T Consensus 3 ~~r~v~l~k~~~~~G~~l~~~~~~~~~~g~~V~~V~~~----spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g 78 (96)
T 2v90_A 3 KPRCLHLEKGPQGFGFLLREEKGLDGRPGQFLWEVDPG----LPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQGQG 78 (96)
T ss_dssp CCEEEEEECBTTBSCEEEEEEECTTSCEEEEEEEECTT----SHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHTTT
T ss_pred CCEEEEEEeCCCcccEEEEeccCCCCCCCeEEEEECCC----ChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 456788888766555555442 17999999876 46667889999999999999999888999999999888
Q ss_pred CeEEEEEEeCCCC
Q psy9827 272 EKLSLTIRREVPR 284 (627)
Q Consensus 272 ~~v~l~V~r~~~~ 284 (627)
..+.|+|.|++..
T Consensus 79 ~~v~l~v~r~~~~ 91 (96)
T 2v90_A 79 SCVSLTVVDPEAD 91 (96)
T ss_dssp TEEEEEEECCCTT
T ss_pred CEEEEEEECCCCc
Confidence 8999999997653
No 203
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=98.88 E-value=5.8e-09 Score=88.16 Aligned_cols=83 Identities=27% Similarity=0.368 Sum_probs=67.6
Q ss_pred ccEEEEEeecCCCCCeeeee--C---CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHcCC
Q psy9827 198 QTLRVQLSKSRKKDDFGIIL--G---NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDSSK 271 (627)
Q Consensus 198 ~~~~V~L~k~~~~~~~gi~~--~---~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~ 271 (627)
..+.|.|.|...+.+||+.+ + .|++|..|.++ ++|..+| |++||+|++|||+++.++++.++...++..+
T Consensus 3 ~~~~v~l~k~~~~~~lG~~~~~~~~~~gv~V~~V~~~----spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 78 (95)
T 2vwr_A 3 EILQVALHKRDSGEQLGIKLVRRTDEPGVFILDLLEG----GLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQASG 78 (95)
T ss_dssp EEEEEEEECSSTTCCCCEEEEECSSSCSEEEEEECTT----SHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred EEEEEEEEECCCCCcccEEEEeccCCCCEEEEEeCCC----ChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 34678888865555566655 3 48999999887 3555566 9999999999999999999999999999889
Q ss_pred CeEEEEEEeCCCC
Q psy9827 272 EKLSLTIRREVPR 284 (627)
Q Consensus 272 ~~v~l~V~r~~~~ 284 (627)
..+.|.|.|++..
T Consensus 79 ~~v~l~v~R~~~~ 91 (95)
T 2vwr_A 79 ERVNLTIARPGKP 91 (95)
T ss_dssp SEEEEEEEEESCS
T ss_pred CEEEEEEEcCCcC
Confidence 9999999997653
No 204
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.88 E-value=7.4e-09 Score=89.27 Aligned_cols=85 Identities=22% Similarity=0.294 Sum_probs=70.0
Q ss_pred CCccEEEEEeecCCCCCeeeeeC----------CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHH
Q psy9827 196 EPQTLRVQLSKSRKKDDFGIILG----------NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEAR 264 (627)
Q Consensus 196 ~~~~~~V~L~k~~~~~~~gi~~~----------~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~ 264 (627)
.+..+.|.|.+...+.+|.+..+ .+++|..|.++ ++|..++ |++||+|++|||+++.++++.++.
T Consensus 5 ~~~~~~v~l~~~~~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~----spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~ 80 (105)
T 1wha_A 5 SSGRHVACLARSERGLGFSIAGGKGSTPYRAGDAGIFVSRIAEG----GAAHRAGTLQVGDRVLSINGVDVTEARHDHAV 80 (105)
T ss_dssp CCEEEEEEECCCTTCCSCEEECCTTSCCSSTTCCSCEEEECCTT----SSHHHHSSCCTTCEEEEESSCBCTTCCHHHHH
T ss_pred CCeeEEEEEEeCCCccCEEEEeccCCCcccCCCCCEEEEEeCCC----CHHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 44567888888776666666652 48999999887 3555566 999999999999999999999999
Q ss_pred HHHHcCCCeEEEEEEeCCCC
Q psy9827 265 KLIDSSKEKLSLTIRREVPR 284 (627)
Q Consensus 265 ~~l~~~~~~v~l~V~r~~~~ 284 (627)
.+++..+..+.|+|.|+...
T Consensus 81 ~~l~~~g~~v~l~v~R~~~~ 100 (105)
T 1wha_A 81 SLLTAASPTIALLLEREAGS 100 (105)
T ss_dssp HHHTSCCSCEEEEEEECCCC
T ss_pred HHHHcCCCeEEEEEEECCCC
Confidence 99998888999999997643
No 205
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.88 E-value=4.5e-09 Score=90.35 Aligned_cols=86 Identities=24% Similarity=0.360 Sum_probs=67.7
Q ss_pred CCccEEEEEeecCCCCCeeeeeC----CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHcC
Q psy9827 196 EPQTLRVQLSKSRKKDDFGIILG----NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDSS 270 (627)
Q Consensus 196 ~~~~~~V~L~k~~~~~~~gi~~~----~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~ 270 (627)
....+.|.|.+...+.+|.+..+ .+++|..|.++ ++|..++ |++||+|++|||+++.+++++++..+|+..
T Consensus 7 ~~~~~~v~l~~~~~g~G~~i~~g~~~~~~~~V~~V~~~----spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~ 82 (103)
T 1uep_A 7 GYKELDVHLRRMESGFGFRILGGDEPGQPILIGAVIAM----GSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHA 82 (103)
T ss_dssp SEEEECCEEESSSSSCCEEECCCCSTTSCCBEEEECTT----STTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHH
T ss_pred CceEEEEEEEeCCCccCEEEeeecCCCCCeEEEEeCCC----ChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 34556777887655555555442 47999999887 3445556 999999999999999999999999999986
Q ss_pred --CCeEEEEEEeCCCCC
Q psy9827 271 --KEKLSLTIRREVPRP 285 (627)
Q Consensus 271 --~~~v~l~V~r~~~~~ 285 (627)
+..++|+|.|+....
T Consensus 83 ~~g~~v~l~v~R~~~~~ 99 (103)
T 1uep_A 83 ARNGQVNLTVRRKVLSG 99 (103)
T ss_dssp HHHTEEEEEEEEECCCC
T ss_pred CCCCcEEEEEEeCCCCC
Confidence 689999999976543
No 206
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=98.88 E-value=1.2e-08 Score=85.41 Aligned_cols=81 Identities=14% Similarity=0.127 Sum_probs=65.4
Q ss_pred ccEEEEEeecCCCCCeeeeeC---CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeE
Q psy9827 198 QTLRVQLSKSRKKDDFGIILG---NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKL 274 (627)
Q Consensus 198 ~~~~V~L~k~~~~~~~gi~~~---~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v 274 (627)
.+..|+|.|...+.||.+..+ .+++|..|.++ ++|..+||++||+|++|||+++.++++.++..+++..++.+
T Consensus 3 ~~r~v~l~r~~~g~G~~~~~~~~~~g~~V~~V~~~----spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~ 78 (91)
T 1g9o_A 3 LPRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPG----SPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAV 78 (91)
T ss_dssp CCEEEEEECBTTBCCEEEEECTTCSSEEEEEECTT----SHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEE
T ss_pred ccEEEEEEeCCCcccEEEEecCCCCCEEEEEECCC----CHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcE
Confidence 356788888876555555554 38999999886 45666789999999999999999999999999999988877
Q ss_pred EEEEEeCC
Q psy9827 275 SLTIRREV 282 (627)
Q Consensus 275 ~l~V~r~~ 282 (627)
.+.+.+..
T Consensus 79 ~~~~~~r~ 86 (91)
T 1g9o_A 79 RLLVVDPE 86 (91)
T ss_dssp EEEEECCC
T ss_pred EEEEEcCC
Confidence 77776643
No 207
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.88 E-value=7.8e-09 Score=99.12 Aligned_cols=73 Identities=34% Similarity=0.522 Sum_probs=66.1
Q ss_pred CceeEEEEccC-------CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEeCC
Q psy9827 60 GSVGIRLTGGN-------KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQNRR 131 (627)
Q Consensus 60 g~lG~~i~g~~-------~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r~~ 131 (627)
.+|||++.++. ..|++|..|.+||||+++| |++||+|++|||.++.++++.+++..++..++.+.|+|.|+.
T Consensus 111 ~~lG~~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~ 190 (196)
T 3gsl_A 111 KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDVVYLKVAKPS 190 (196)
T ss_dssp TBSCEEEEESBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHSCCEEEEEEEEEES
T ss_pred CCceEEEEccCCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHcCCCeEEEEEeCCC
Confidence 48999998753 2479999999999999999 999999999999999999999999999988999999999865
Q ss_pred c
Q psy9827 132 D 132 (627)
Q Consensus 132 ~ 132 (627)
.
T Consensus 191 ~ 191 (196)
T 3gsl_A 191 N 191 (196)
T ss_dssp C
T ss_pred C
Confidence 4
No 208
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.87 E-value=2e-09 Score=105.13 Aligned_cols=85 Identities=29% Similarity=0.479 Sum_probs=72.7
Q ss_pred CCCCceEEEeccC-CceeEEEEccCC-CCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCee-
Q psy9827 47 VEPDPRFITFQKE-GSVGIRLTGGNK-VGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQI- 123 (627)
Q Consensus 47 ~~~~~r~v~l~k~-g~lG~~i~g~~~-~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V- 123 (627)
....++.|.+.+. ++|||.+.++.+ .|++|..|.+||||+++||++||+|++|||..+.++++.++...+...+..|
T Consensus 6 ~~~~~r~v~l~k~~~glG~~l~~~~~~~gv~V~~V~~gSpA~~aGL~~GD~Il~VNG~~V~~~s~~dl~~~l~~~g~~v~ 85 (216)
T 2krg_A 6 TMLRPRLCTMKKGPSGYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETK 85 (216)
T ss_dssp TTCCCEEEEEECCSSSSCEEECCCSSSCSCBEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCTHHHHHHHHHHCSEEE
T ss_pred cccceEEEEEEeCCCCceEEEEecCCCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCeEE
Confidence 3457888999886 589999988743 4899999999999999999999999999999999888888888777668888
Q ss_pred EEEEEeCC
Q psy9827 124 HLIVQNRR 131 (627)
Q Consensus 124 ~L~v~r~~ 131 (627)
.|+|.|.+
T Consensus 86 ~l~V~R~g 93 (216)
T 2krg_A 86 LLVVDRET 93 (216)
T ss_dssp EEECCHHH
T ss_pred EEEEEECC
Confidence 88887644
No 209
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.87 E-value=1e-08 Score=87.06 Aligned_cols=85 Identities=20% Similarity=0.275 Sum_probs=67.3
Q ss_pred CccEEEEEeecCCCCCeeeeeC----CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHcCC
Q psy9827 197 PQTLRVQLSKSRKKDDFGIILG----NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDSSK 271 (627)
Q Consensus 197 ~~~~~V~L~k~~~~~~~gi~~~----~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~ 271 (627)
+..+.|.|.+...+.||.+..+ .+++|..|.++ ++|..+| |++||+|++|||+++.+++++++..+++..+
T Consensus 4 ~~~~~v~l~~~~~~lG~~i~~~~~~~~~~~V~~V~~~----spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g 79 (97)
T 1n7e_A 4 AIIYTVELKRYGGPLGITISGTEEPFDPIIISSLTKG----GLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAG 79 (97)
T ss_dssp CCEEEEEEECTTSCCCEEEECCSSTTSCCEEEEECTT----SHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTCC
T ss_pred ceEEEEEEEeCCCCcCEEEEcccCCCCCEEEEEECCC----CHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 3456777766544455555543 48999999887 3555667 9999999999999999999999999999878
Q ss_pred CeEEEEEEeCCCCC
Q psy9827 272 EKLSLTIRREVPRP 285 (627)
Q Consensus 272 ~~v~l~V~r~~~~~ 285 (627)
..+.|+|.|++...
T Consensus 80 ~~v~l~v~R~~~~~ 93 (97)
T 1n7e_A 80 ETVTLKIKKQTDAQ 93 (97)
T ss_dssp SEEEEEEECCCCCC
T ss_pred CeEEEEEEeCCCCC
Confidence 89999999977643
No 210
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=98.87 E-value=7.9e-09 Score=86.98 Aligned_cols=81 Identities=17% Similarity=0.215 Sum_probs=63.8
Q ss_pred cEEEEEeecCCCCCeeeeeC---CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeE
Q psy9827 199 TLRVQLSKSRKKDDFGIILG---NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKL 274 (627)
Q Consensus 199 ~~~V~L~k~~~~~~~gi~~~---~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v 274 (627)
...|.|.|...+.||.+..+ .+++|..|.+++ +|..+| |++||+|++|||+++.+++++++..+|+..++.+
T Consensus 5 ~r~v~l~k~~~~lG~~i~~~~~~~~~~V~~v~~gs----pA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v 80 (93)
T 3o46_A 5 VKIIRLVKNREPLGATIKKDEQTGAIIVARIMRGG----AADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQGAI 80 (93)
T ss_dssp CEEEEEEESSSCCCEEEEECTTTCCEEEEEECTTS----HHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCCEEE
T ss_pred EEEEEEEeCCCCccEEEEecCCCCCEEEEEECCCC----HHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 35677888755445555444 589999999873 444445 9999999999999999999999999999988899
Q ss_pred EEEEEeCCC
Q psy9827 275 SLTIRREVP 283 (627)
Q Consensus 275 ~l~V~r~~~ 283 (627)
+|+|.|...
T Consensus 81 ~l~v~~~~~ 89 (93)
T 3o46_A 81 TFKIIPGSK 89 (93)
T ss_dssp EEEEECC--
T ss_pred EEEEEeCCC
Confidence 999998544
No 211
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=98.87 E-value=7.7e-09 Score=89.16 Aligned_cols=83 Identities=22% Similarity=0.351 Sum_probs=68.0
Q ss_pred ccEEEEEeecCCCCCeeeeeC---------CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHH
Q psy9827 198 QTLRVQLSKSRKKDDFGIILG---------NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLI 267 (627)
Q Consensus 198 ~~~~V~L~k~~~~~~~gi~~~---------~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l 267 (627)
..+.|.|.|...+.||.+..+ .|++|..|.++ ++|..+| |++||+|++|||+++.++++.++...+
T Consensus 3 ~~~~v~l~k~~~glG~~i~gg~~~~~~~~~~gv~V~~V~~~----spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~ 78 (105)
T 2awx_A 3 KIMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEG----GAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTAL 78 (105)
T ss_dssp CEEEEEEECBTTBSSEEEEECBTSCSBTTBCCEEEEEECTT----SHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHH
T ss_pred eEEEEEEEECCCCCCEEEeCccCCCCCCCCCCEEEEEECCC----CHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 456788888876666666543 38999999887 3455566 999999999999999999999999999
Q ss_pred HcCCCeEEEEEEeCCCC
Q psy9827 268 DSSKEKLSLTIRREVPR 284 (627)
Q Consensus 268 ~~~~~~v~l~V~r~~~~ 284 (627)
+..+..+.|.|.|+...
T Consensus 79 ~~~~~~v~l~v~R~~~~ 95 (105)
T 2awx_A 79 KNTSDFVYLKVAKPTSM 95 (105)
T ss_dssp HSCCSEEEEEEECCCC-
T ss_pred HcCCCeEEEEEEcCCCC
Confidence 98888999999997654
No 212
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.86 E-value=3e-08 Score=84.08 Aligned_cols=84 Identities=21% Similarity=0.305 Sum_probs=68.3
Q ss_pred CCCccEEEEEeecCCCCCeeeeeC-CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcC--C
Q psy9827 195 PEPQTLRVQLSKSRKKDDFGIILG-NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS--K 271 (627)
Q Consensus 195 ~~~~~~~V~L~k~~~~~~~gi~~~-~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~--~ 271 (627)
..+..+.+.+.+...+.+|.+... .|++|..|.++ +..++|++||+|++|||+++.++++++++.+|+.. +
T Consensus 7 ~~~~~~~v~l~~~~~g~G~~i~~~~~Gv~V~~v~~~------a~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g 80 (96)
T 1ujv_A 7 GQAELMTLTIVKGAQGFGFTIADSPTGQRVKQILDI------QGCPGLCEGDLIVEINQQNVQNLSHTEVVDILKDCPIG 80 (96)
T ss_dssp CCCCCEEEEEECCSSSSSEEEEEETTEEEEEEESCG------GGSTTCCSSCEEEEETTEECSSCCHHHHHHHHHHSCTT
T ss_pred CCceEEEEEEEeCCCceeEEEEcCCCCEEEEEEecc------cccCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCC
Confidence 445678889998766555555443 48999999752 35789999999999999999999999999999984 5
Q ss_pred CeEEEEEEeCCCC
Q psy9827 272 EKLSLTIRREVPR 284 (627)
Q Consensus 272 ~~v~l~V~r~~~~ 284 (627)
..+.|+|.|++..
T Consensus 81 ~~v~l~v~R~g~~ 93 (96)
T 1ujv_A 81 SETSLIIHRGSGP 93 (96)
T ss_dssp SEEEEEEECCSSC
T ss_pred CEEEEEEEECCCC
Confidence 7999999997654
No 213
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.86 E-value=5.7e-09 Score=88.50 Aligned_cols=84 Identities=25% Similarity=0.313 Sum_probs=68.7
Q ss_pred CCCccEEEEEeecCC--CCCeeeeeCCcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCC
Q psy9827 195 PEPQTLRVQLSKSRK--KDDFGIILGNKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKE 272 (627)
Q Consensus 195 ~~~~~~~V~L~k~~~--~~~~gi~~~~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~ 272 (627)
..+..++|.|.+... +.+|.+....+++|..|.+++ +|. ++|++||+|++|||+++.++++.++..+++..+.
T Consensus 5 ~~~~~~~v~l~~~~~~~~~G~~l~~~~~~~V~~V~~~s----pA~-agL~~GD~Il~ing~~v~~~~~~~~~~~~~~~g~ 79 (96)
T 2edv_A 5 SSGVRHTVKIDKDTLLQDYGFHISESLPLTVVAVTAGG----SAH-GKLFPGDQILQMNNEPAEDLSWERAVDILREAED 79 (96)
T ss_dssp SSCEEEEEEECCCSSSCSCSBCCCSSSSCBCCCBCSSS----SST-TTSCTTCBEEEESSCBSTTCCHHHHHHHHHHCSS
T ss_pred CCCccEEEEEEECCCCCcccEEEecCCCeEEEEECCCC----chh-hCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 345667888888763 345555545699999999874 333 8999999999999999999999999999999889
Q ss_pred eEEEEEEeCCC
Q psy9827 273 KLSLTIRREVP 283 (627)
Q Consensus 273 ~v~l~V~r~~~ 283 (627)
.+.|+|.|+..
T Consensus 80 ~v~l~v~R~~~ 90 (96)
T 2edv_A 80 SLSITVVRCTS 90 (96)
T ss_dssp CEEEEEEECCC
T ss_pred eEEEEEEECCC
Confidence 99999999763
No 214
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.86 E-value=8.3e-09 Score=90.99 Aligned_cols=63 Identities=21% Similarity=0.355 Sum_probs=56.4
Q ss_pred CCCEEEEEeCC--CChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEeCCcc
Q psy9827 71 KVGIFVTAVQP--GSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQNRRDE 133 (627)
Q Consensus 71 ~~gi~V~~V~~--gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r~~~~ 133 (627)
..|++|..|.+ +|||+++||++||+|++|||.++.++++.++...+...+..+.|+|.|++..
T Consensus 43 ~~gv~V~~V~~~~~spA~~aGL~~GD~Il~Vng~~v~~~~~~dl~~~l~~~g~~v~l~v~R~g~~ 107 (118)
T 2yub_A 43 ATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAIKQTSQTLQLLIEHDPVP 107 (118)
T ss_dssp CCEEEEEECCTTTSCTTHHHHCCTTCCEEEESSSBTTTSCHHHHHHHHHCCSSCEEEEEEECSSC
T ss_pred CCcEEEEEecCCCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHhCCCEEEEEEEECCEE
Confidence 36899999999 9999999999999999999999999988888888876588999999987654
No 215
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.86 E-value=1.3e-08 Score=86.39 Aligned_cols=83 Identities=22% Similarity=0.332 Sum_probs=68.2
Q ss_pred ccEEEEEeecCCCCCeeeeeC-----CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHcCC
Q psy9827 198 QTLRVQLSKSRKKDDFGIILG-----NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDSSK 271 (627)
Q Consensus 198 ~~~~V~L~k~~~~~~~gi~~~-----~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~ 271 (627)
..+.|.|.+...+.||.+..+ .+++|..|.++ ++|..+| |++||+|++|||+++.++++.++..+++..+
T Consensus 4 ~~~~v~l~~~~~~lG~~l~~~~~~~~~gv~V~~V~~~----spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 79 (98)
T 2opg_A 4 CETTIEISKGRTGLGLSIVGGSDTLLGAIIIHEVYEE----GAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTP 79 (98)
T ss_dssp EEEEEEEECBTTBTCEEEEECTTSTTCSEEEEEECTT----SHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCC
T ss_pred CEEEEEEEECCCcccEEEecCCCCCCCCEEEEEECCC----ChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 356788888766666666654 38999999887 3555566 9999999999999999999999999999888
Q ss_pred CeEEEEEEeCCCC
Q psy9827 272 EKLSLTIRREVPR 284 (627)
Q Consensus 272 ~~v~l~V~r~~~~ 284 (627)
..+.|+|.|++..
T Consensus 80 ~~v~l~v~R~~~~ 92 (98)
T 2opg_A 80 QRVRLTLYRDEAP 92 (98)
T ss_dssp SEEEEEEEECSSC
T ss_pred CeEEEEEEcCCCC
Confidence 9999999997654
No 216
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=98.85 E-value=1.6e-08 Score=85.63 Aligned_cols=82 Identities=20% Similarity=0.358 Sum_probs=67.1
Q ss_pred ccEEEEEeecCCCCCeeeeeC-------CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHc
Q psy9827 198 QTLRVQLSKSRKKDDFGIILG-------NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDS 269 (627)
Q Consensus 198 ~~~~V~L~k~~~~~~~gi~~~-------~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~ 269 (627)
..++|.|.+...+.+|.+..+ .+++|..|.++ ++|..+| |++||+|++|||+++.++++.++..+++.
T Consensus 5 ~~~~v~l~k~~~~lG~~i~~g~~~~~~~~g~~V~~V~~~----spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 80 (96)
T 1d5g_A 5 DIFEVELAKNDNSLGISVTGGVNTSVRHGGIYVKAVIPQ----GAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRN 80 (96)
T ss_dssp CEEEEEEECSSSSCCEEEECCSSSCSSSSCCEEEEECTT----SHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHS
T ss_pred CEEEEEEEeCCCCCCEEEECCCCCCCCcCCEEEEEeCCC----ChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 456788888765555655543 38999999887 3555667 99999999999999999999999999999
Q ss_pred CCCeEEEEEEeCCC
Q psy9827 270 SKEKLSLTIRREVP 283 (627)
Q Consensus 270 ~~~~v~l~V~r~~~ 283 (627)
.+..+.|.|.|+..
T Consensus 81 ~g~~v~l~v~R~~~ 94 (96)
T 1d5g_A 81 TGQVVHLLLEKGQS 94 (96)
T ss_dssp CCSEEEEEEECCSC
T ss_pred CCCeEEEEEEcCCC
Confidence 88899999998654
No 217
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=98.85 E-value=8e-09 Score=87.61 Aligned_cols=82 Identities=22% Similarity=0.297 Sum_probs=67.0
Q ss_pred cEEEEEeecCCCCCeeeeeC--------CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHc
Q psy9827 199 TLRVQLSKSRKKDDFGIILG--------NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDS 269 (627)
Q Consensus 199 ~~~V~L~k~~~~~~~gi~~~--------~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~ 269 (627)
.+.|.|.+...+.||.+..+ .+++|..|.++ ++|..+| |++||+|++|||+++.+++++++..+|+.
T Consensus 4 ~~~v~l~k~~~~lG~~i~~~~~~~~~~~~~~~V~~V~~~----spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 79 (97)
T 2jil_A 4 TVEVTLHKEGNTFGFVIRGGAHDDRNKSRPVVITSVRPG----GPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQ 79 (97)
T ss_dssp EEEEEEECBTTBCSEEEEEECCSCC--CEEEEEEEECTT----SHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH
T ss_pred EEEEEEEeCCCccCEEEeCcccCCCCCCCCEEEEEECCC----CHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 46677877655566666554 37999999887 4555667 99999999999999998889999999999
Q ss_pred CCCeEEEEEEeCCCC
Q psy9827 270 SKEKLSLTIRREVPR 284 (627)
Q Consensus 270 ~~~~v~l~V~r~~~~ 284 (627)
.+..+.|.|.|+...
T Consensus 80 ~g~~v~l~v~R~~~~ 94 (97)
T 2jil_A 80 CGQEAALLIEYDVSE 94 (97)
T ss_dssp SCSEEEEEEEEECCC
T ss_pred CCCeEEEEEEeCCCc
Confidence 888999999997653
No 218
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=98.85 E-value=3.2e-09 Score=89.01 Aligned_cols=82 Identities=18% Similarity=0.215 Sum_probs=65.0
Q ss_pred ccEEEEEeecCCCCCeeeeeC---CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeE
Q psy9827 198 QTLRVQLSKSRKKDDFGIILG---NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKL 274 (627)
Q Consensus 198 ~~~~V~L~k~~~~~~~gi~~~---~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v 274 (627)
.+..|.|.|...+.||.+... .+++|..|.++ ++|..+||++||+|++|||+++.+++++++..+|+..+..+
T Consensus 3 ~pr~v~l~k~~~~~G~~l~~~~~~~g~~V~~V~~~----spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v 78 (91)
T 2vsp_A 3 KPKLCRLAKGENGYGFHLNAIRGLPGSFIKEVQKG----GPADLAGLEDEDVIIEVNGVNVLDEPYEKVVDRIQSSGKNV 78 (91)
T ss_dssp CEEEEEEECBTTBTSCCCBCCTTCSCCBC-CCCTT----SHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHTTSCSEE
T ss_pred CcEEEEEEeCCCcccEEEEeccCCCCeEEEEECCC----ChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEE
Confidence 457888888766555555432 48999999886 46667789999999999999999999999999999888899
Q ss_pred EEEEEeCCC
Q psy9827 275 SLTIRREVP 283 (627)
Q Consensus 275 ~l~V~r~~~ 283 (627)
.|+|.|++.
T Consensus 79 ~l~v~r~~~ 87 (91)
T 2vsp_A 79 TLLVCGKKA 87 (91)
T ss_dssp EEEEEC---
T ss_pred EEEEEeCCc
Confidence 999998654
No 219
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.85 E-value=8.6e-09 Score=89.41 Aligned_cols=83 Identities=23% Similarity=0.263 Sum_probs=66.8
Q ss_pred CccEEEEEeecCCCCCeeeeeC--------CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHH
Q psy9827 197 PQTLRVQLSKSRKKDDFGIILG--------NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLI 267 (627)
Q Consensus 197 ~~~~~V~L~k~~~~~~~gi~~~--------~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l 267 (627)
...+.|.|.|...+.||.+..+ .+++|..|.++ ++|..+| |++||+|++|||+++.++++++++.+|
T Consensus 14 ~~~~~v~l~k~~~glG~~i~~~~~~~~~~~~g~~V~~v~~~----spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l 89 (108)
T 2d92_A 14 PEVKIVELVKDCKGLGFSILDYQDPLDPTRSVIVIRSLVAD----GVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEIL 89 (108)
T ss_dssp SSCEEEEEEECSSCCSEEEEEEECSSCTTCEEEEEEEECTT----CHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHH
T ss_pred CceEEEEEEECCCccCEEEecccccCCCCCCCEEEEEECCC----CHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3557888998876666666552 37999999987 3444445 999999999999999999999999999
Q ss_pred HcC-CCeEEEEEEeCCC
Q psy9827 268 DSS-KEKLSLTIRREVP 283 (627)
Q Consensus 268 ~~~-~~~v~l~V~r~~~ 283 (627)
+.. ++.++|+|.|+..
T Consensus 90 ~~~~~~~v~l~v~R~~~ 106 (108)
T 2d92_A 90 KAVPPGLVHLGICSGPS 106 (108)
T ss_dssp HHSCSEEEEEEEECCCC
T ss_pred HhCCCCeEEEEEEcCCC
Confidence 996 5689999998643
No 220
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.84 E-value=1.1e-08 Score=99.28 Aligned_cols=72 Identities=18% Similarity=0.346 Sum_probs=65.4
Q ss_pred CceeEEEEccCCCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEeCCc
Q psy9827 60 GSVGIRLTGGNKVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQNRRD 132 (627)
Q Consensus 60 g~lG~~i~g~~~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r~~~ 132 (627)
.+|||++.+. ..|++|..|.+||+|+++| |++||+|++|||.++.++++.++...++..+..+.|+|.|...
T Consensus 125 ~~lG~~~~~~-~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~L~V~R~~~ 197 (206)
T 3r0h_A 125 KELGLSLSPN-EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSMEVTRPKP 197 (206)
T ss_dssp CCCCEEEEEC-SSCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEECC
T ss_pred CccCeEEEcC-CceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCC
Confidence 3799999865 4689999999999999999 9999999999999999999999999999888999999998543
No 221
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.84 E-value=1.2e-08 Score=87.66 Aligned_cols=86 Identities=22% Similarity=0.318 Sum_probs=70.0
Q ss_pred CCccEEEEEeecCCCCCeeeee------CCcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHH
Q psy9827 196 EPQTLRVQLSKSRKKDDFGIIL------GNKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLID 268 (627)
Q Consensus 196 ~~~~~~V~L~k~~~~~~~gi~~------~~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~ 268 (627)
....+.|.|.+...+.+|.+.. ..+++|..|.++ ++|..++ |++||+|++|||+++.++++.++..+++
T Consensus 9 ~~~~~~v~l~~~~~g~G~~l~~~~~~~~~~~v~V~~V~~~----spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~ 84 (104)
T 2djt_A 9 ASGHFSVELVRGYAGFGLTLGGGRDVAGDTPLAVRGLLKD----GPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIR 84 (104)
T ss_dssp CCCCEEEEEECCSSSCCEEEECCEETTEECCCEEEEECTT----CHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHH
T ss_pred CCceEEEEEEeCCCCccEEEEeccCCCCCCCEEEEEECCC----CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3456788888876666666655 358999999887 3555667 9999999999999999989999999999
Q ss_pred cCCCeEEEEEEeCCCCC
Q psy9827 269 SSKEKLSLTIRREVPRP 285 (627)
Q Consensus 269 ~~~~~v~l~V~r~~~~~ 285 (627)
..+..+.|+|.|++..+
T Consensus 85 ~~g~~v~l~v~R~g~~~ 101 (104)
T 2djt_A 85 AGGPQLHLVIRRPLSGP 101 (104)
T ss_dssp HTCSEEEEEECCCCCCC
T ss_pred cCCCeEEEEEEECCCCC
Confidence 88889999999876543
No 222
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=98.84 E-value=1.1e-08 Score=87.69 Aligned_cols=83 Identities=18% Similarity=0.302 Sum_probs=67.8
Q ss_pred ccEEEEEeecCCCCCeeeeeC---------CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHH
Q psy9827 198 QTLRVQLSKSRKKDDFGIILG---------NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLI 267 (627)
Q Consensus 198 ~~~~V~L~k~~~~~~~gi~~~---------~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l 267 (627)
....|.|.+...+.||.+..+ .|++|..|.++ ++|..+| |++||+|++|||+++.++++.++..++
T Consensus 4 ~~~~v~l~k~~~glG~~i~~g~~~~~~~~~~gv~V~~V~~~----spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~ 79 (102)
T 2i1n_A 4 KYEEIVLERGNSGLGFSIAGGIDNPHVPDDPGIFITKIIPG----GAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEAL 79 (102)
T ss_dssp EEEEEEEECBTTBTSEEEEECTTSCSSTTCCCEEEEEECTT----SHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHH
T ss_pred eEEEEEEEECCCcCCEEEEcccCCCCcCCCCCEEEEEECCC----CHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 345678888766666666543 38999999887 3555566 999999999999999999999999999
Q ss_pred HcCCCeEEEEEEeCCCC
Q psy9827 268 DSSKEKLSLTIRREVPR 284 (627)
Q Consensus 268 ~~~~~~v~l~V~r~~~~ 284 (627)
+..+..+.|.|.|++..
T Consensus 80 ~~~g~~v~l~v~R~~~~ 96 (102)
T 2i1n_A 80 KEAGPVVRLVVRRRQPP 96 (102)
T ss_dssp HHSCSEEEEEEEEECCC
T ss_pred HcCCCeEEEEEEeCCCC
Confidence 99889999999997654
No 223
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=98.84 E-value=1.2e-08 Score=85.88 Aligned_cols=81 Identities=23% Similarity=0.346 Sum_probs=65.8
Q ss_pred ccEEEEEeecCCCCCeeeeeC---------CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHH
Q psy9827 198 QTLRVQLSKSRKKDDFGIILG---------NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLI 267 (627)
Q Consensus 198 ~~~~V~L~k~~~~~~~gi~~~---------~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l 267 (627)
..+.|+|.|...+.||.+..+ .+++|..|.++ ++|..+| |++||+|++|||+++.++++.++..++
T Consensus 3 ~~~~v~l~k~~~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~----spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~ 78 (94)
T 2fe5_A 3 TIMEVNLLKGPKGLGFSIAGGIGNQHIPGDNSIYITKIIEG----GAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASL 78 (94)
T ss_dssp CEEEEEEECCTTCSCEEEEECBTSCSBTTBCCEEEEEECTT----SHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHH
T ss_pred EEEEEEEEECCCCCCEEEEcccCCCCCCCCCCEEEEEECCC----ChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 346788888766666666543 37999999887 3455556 999999999999999998999999999
Q ss_pred HcCCCeEEEEEEeCC
Q psy9827 268 DSSKEKLSLTIRREV 282 (627)
Q Consensus 268 ~~~~~~v~l~V~r~~ 282 (627)
+..++.+.|+|.|++
T Consensus 79 ~~~~~~v~l~v~R~g 93 (94)
T 2fe5_A 79 KNTSDMVYLKVAKPG 93 (94)
T ss_dssp HTCCSEEEEEEECCC
T ss_pred HcCCCeEEEEEEcCC
Confidence 988889999998864
No 224
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.84 E-value=1.5e-08 Score=84.20 Aligned_cols=79 Identities=23% Similarity=0.328 Sum_probs=63.9
Q ss_pred cEEEEEeecCCCCCeeeeeC----CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeE
Q psy9827 199 TLRVQLSKSRKKDDFGIILG----NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKL 274 (627)
Q Consensus 199 ~~~V~L~k~~~~~~~gi~~~----~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v 274 (627)
.++|++ ++..+.+|.+..+ .+++|..|.++ ++|..+||++||+|++|||+++.++++.++..+++..+..+
T Consensus 4 ~~~v~l-~~~~~~G~~l~~g~~~~~~~~V~~V~~~----spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v 78 (88)
T 2uzc_A 4 NYSVSL-VGPAPWGFRLQGGKDFNMPLTISSLKDG----GKAAQANVRIGDVVLSIDGINAQGMTHLEAQNKIKGCTGSL 78 (88)
T ss_dssp EEEEEE-ESSSCCCEEEEEEGGGTEEEEEEEECTT----SHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEE
T ss_pred EEEEEE-cCCCcccEEEECcCCCCCCeEEEEECCC----ChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 456777 5555555555543 37999999887 45666789999999999999999999999999999888899
Q ss_pred EEEEEeCC
Q psy9827 275 SLTIRREV 282 (627)
Q Consensus 275 ~l~V~r~~ 282 (627)
.|+|.|++
T Consensus 79 ~l~v~R~g 86 (88)
T 2uzc_A 79 NMTLQRES 86 (88)
T ss_dssp EEEEECCC
T ss_pred EEEEEeCC
Confidence 99999865
No 225
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=98.83 E-value=6.1e-09 Score=87.05 Aligned_cols=79 Identities=22% Similarity=0.368 Sum_probs=64.7
Q ss_pred cEEEEEeecCCCCCeeeeeC----CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHcCC--
Q psy9827 199 TLRVQLSKSRKKDDFGIILG----NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDSSK-- 271 (627)
Q Consensus 199 ~~~V~L~k~~~~~~~gi~~~----~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~-- 271 (627)
...|.|.+...+.+|.+..+ .+++|..|.++ ++|..+| |++||+|++|||+++.++++.++..+++..+
T Consensus 3 ~~~v~l~~~~~g~G~~~~~g~~~~~~~~V~~V~~~----spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 78 (90)
T 2q9v_A 3 EQDIFLWRKETGFGFRILGGNEPGEPIYIGHIVPL----GAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQ 78 (90)
T ss_dssp EEEEEEECBTTBCCEEEEECSSTTSCEEEEEECTT----SHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHH
T ss_pred cEEEEEEECCCccCEEEEccccCCCCEEEEEECCC----ChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 46788888776666666654 47999999887 4555667 9999999999999999889999999999864
Q ss_pred CeEEEEEEeC
Q psy9827 272 EKLSLTIRRE 281 (627)
Q Consensus 272 ~~v~l~V~r~ 281 (627)
+.+.|+|.|.
T Consensus 79 ~~v~l~v~R~ 88 (90)
T 2q9v_A 79 GHVNLTVRQT 88 (90)
T ss_dssp TEEEEEEEEC
T ss_pred CeEEEEEEec
Confidence 3899999885
No 226
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.83 E-value=1.6e-08 Score=88.00 Aligned_cols=85 Identities=18% Similarity=0.313 Sum_probs=69.2
Q ss_pred CCCccEEEEEeecCCCCCeeeeeC-------CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHH
Q psy9827 195 PEPQTLRVQLSKSRKKDDFGIILG-------NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKL 266 (627)
Q Consensus 195 ~~~~~~~V~L~k~~~~~~~gi~~~-------~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~ 266 (627)
+....+.|.|.+...+.+|.+..+ .|++|..|.++ ++|..+| |++||+|++|||+++.++++.++..+
T Consensus 5 ~~~~~~~v~l~~~~~glG~~l~~g~~~~~~~~gv~V~~V~~~----spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~ 80 (110)
T 1um1_A 5 SSGYVFTVELERGPSGLGMGLIDGMHTHLGAPGLYIQTLLPG----SPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDL 80 (110)
T ss_dssp SCCCEEEEEEECCTTCCCEEEEETTTSTTCCSSEEEEEECTT----SHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHH
T ss_pred CCCcEEEEEEEECCCccCEEEeCCcCCCCCCCCEEEEEECCC----ChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 344667888888766556655553 47999999887 4555566 99999999999999999999999999
Q ss_pred HHcCCCeEEEEEEeCCC
Q psy9827 267 IDSSKEKLSLTIRREVP 283 (627)
Q Consensus 267 l~~~~~~v~l~V~r~~~ 283 (627)
++..+..+.|.|.|++.
T Consensus 81 ~~~~~~~v~l~v~R~~~ 97 (110)
T 1um1_A 81 IRHGGKKMRFLVAKSDV 97 (110)
T ss_dssp HHTCCSEEEEEEECCCH
T ss_pred HHcCCCeEEEEEEeCCc
Confidence 99988999999999653
No 227
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.83 E-value=1.1e-08 Score=85.87 Aligned_cols=82 Identities=24% Similarity=0.402 Sum_probs=65.7
Q ss_pred ccEEEEEeecCCCCCeeeeeC----CcEEEEEeccCCCCCCCCCCC-CCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCC
Q psy9827 198 QTLRVQLSKSRKKDDFGIILG----NKIFVKEVTHRLDNNASPGTH-QLAEGDVLLKINNHPTDGMSVKEARKLIDSSKE 272 (627)
Q Consensus 198 ~~~~V~L~k~~~~~~~gi~~~----~gi~V~~V~~g~~~~~~a~~~-~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~ 272 (627)
.+..|.|.|...+.+|.+..+ .+++|..|.++ ++|..+ +|++||+|++|||+++.++++.++..+++..++
T Consensus 5 ~~r~v~l~k~~~glG~~l~~~~~~~~~~~V~~V~~~----spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~ 80 (93)
T 2dkr_A 5 SSGVVELPKTDEGLGFNIMGGKEQNSPIYISRVIPG----GVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQG 80 (93)
T ss_dssp CSCEEEEECCTTCCCEEEECSSSSSCCCEEEEECTT----SHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCCS
T ss_pred CCEEEEEEeCCCCccEEEecccCCCCCEEEEEECCC----CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 456788888765555555542 58999999887 344444 699999999999999999999999999998888
Q ss_pred eEEEEEEeCCC
Q psy9827 273 KLSLTIRREVP 283 (627)
Q Consensus 273 ~v~l~V~r~~~ 283 (627)
.+.|.|.|+..
T Consensus 81 ~v~l~v~r~~~ 91 (93)
T 2dkr_A 81 SVKLVVRSGPS 91 (93)
T ss_dssp EEEEEECCCCS
T ss_pred cEEEEEEeCCC
Confidence 99999988653
No 228
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=98.82 E-value=1.6e-08 Score=87.28 Aligned_cols=85 Identities=25% Similarity=0.413 Sum_probs=68.0
Q ss_pred CCCccEEEEEeecCCCCCeeeeeC-------CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHH
Q psy9827 195 PEPQTLRVQLSKSRKKDDFGIILG-------NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKL 266 (627)
Q Consensus 195 ~~~~~~~V~L~k~~~~~~~gi~~~-------~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~ 266 (627)
..+..+.|.| +...+.+|.+..+ .|++|..|.++ ++|..+| |++||+|++|||+++.++++.++..+
T Consensus 8 ~~~~~~~v~l-~~~~glG~~i~~~~~~~~~~~gv~V~~V~~~----spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~ 82 (106)
T 3axa_A 8 KEPEIITVTL-KKQNGMGLSIVAAKGAGQDKLGIYVKSVVKG----GAADVDGRLAAGDQLLSVDGRSLVGLSQERAAEL 82 (106)
T ss_dssp --CCEEEEEE-ECSSSCSEEEEEEECSSCSSEEEEEEEEBTT----SHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CCceEEEEEE-CCCCccCEEEEeecCCCCCCCCEEEEEECCC----CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3456677888 6666666666542 37999999987 3455566 99999999999999999999999999
Q ss_pred HHcCCCeEEEEEEeCCCC
Q psy9827 267 IDSSKEKLSLTIRREVPR 284 (627)
Q Consensus 267 l~~~~~~v~l~V~r~~~~ 284 (627)
++..+..+.|+|.|++..
T Consensus 83 ~~~~g~~v~l~v~R~~~~ 100 (106)
T 3axa_A 83 MTRTSSVVTLEVAKQGAI 100 (106)
T ss_dssp HHTCCSEEEEEEECCCSS
T ss_pred HHcCCCeEEEEEEeCCcc
Confidence 999889999999997654
No 229
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=98.82 E-value=1e-08 Score=86.61 Aligned_cols=83 Identities=13% Similarity=0.224 Sum_probs=67.4
Q ss_pred CccEEEEEeecCCCCCeeeeeCC---cEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCe
Q psy9827 197 PQTLRVQLSKSRKKDDFGIILGN---KIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEK 273 (627)
Q Consensus 197 ~~~~~V~L~k~~~~~~~gi~~~~---gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~ 273 (627)
..+..|.|.+...+.||.+..+. +++|..|.++ ++|..+||++||+|++|||+++.+++++++..+|+..++.
T Consensus 4 ~~~r~v~l~~~~~~~G~~l~~~~~~~~~~V~~v~~~----spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 79 (95)
T 3r68_A 4 HQPRVVVIKKGSNGYGFYLRAGPEQKGQIIKDIEPG----SPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQ 79 (95)
T ss_dssp CCCEEEEEECBTTBCSCEEEEC--CCSEEEECCCTT----SHHHHHTCCTTEEEEEETTEECTTCCHHHHHHHHHTTTTE
T ss_pred CCcEEEEEecCCCcccEEEEecCCCCCEEEEEECCC----CHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 35567888887666666665542 8999999887 4566677999999999999999999999999999998899
Q ss_pred EEEEEEeCCC
Q psy9827 274 LSLTIRREVP 283 (627)
Q Consensus 274 v~l~V~r~~~ 283 (627)
+.+.+.|...
T Consensus 80 ~~~~~~r~~~ 89 (95)
T 3r68_A 80 TTLLVLDKEL 89 (95)
T ss_dssp EEEEEEECC-
T ss_pred EEEEEECCcc
Confidence 9998888654
No 230
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.82 E-value=9.1e-09 Score=89.04 Aligned_cols=85 Identities=24% Similarity=0.332 Sum_probs=69.3
Q ss_pred CccEEEEEeecCCCCCeeeee---C-------CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHH
Q psy9827 197 PQTLRVQLSKSRKKDDFGIIL---G-------NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARK 265 (627)
Q Consensus 197 ~~~~~V~L~k~~~~~~~gi~~---~-------~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~ 265 (627)
...+.|.|.+...+.+|.+.. + .|++|..|.++ ++|..++ |++||+|++|||+++.++++.++..
T Consensus 8 ~~~~~v~l~k~~~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~----spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~ 83 (107)
T 1wf8_A 8 LELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTEG----GAAQRDGRIQVNDQIVEVDGISLVGVTQNFAAT 83 (107)
T ss_dssp EEEEEEEEECBTTBSCEEEEEEEESCCTTCCEEEEEEEEECTT----CHHHHHCSSCTTCBEEEETTEECBSCCHHHHHH
T ss_pred ceEEEEEEEECCCcccEEEEecCCCCCCCCCCCCEEEEEeCCC----CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 345678888876666666665 1 37999999887 3455566 9999999999999999999999999
Q ss_pred HHHcCCCeEEEEEEeCCCCC
Q psy9827 266 LIDSSKEKLSLTIRREVPRP 285 (627)
Q Consensus 266 ~l~~~~~~v~l~V~r~~~~~ 285 (627)
+++..+..+.|+|.|+....
T Consensus 84 ~~~~~~~~v~l~v~R~~~~~ 103 (107)
T 1wf8_A 84 VLRNTKGNVRFVIGREKPSG 103 (107)
T ss_dssp HHHHCCSEEEEEEEEECCCS
T ss_pred HHhcCCCeEEEEEEeCCCCC
Confidence 99999999999999976543
No 231
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.82 E-value=1.6e-08 Score=84.59 Aligned_cols=80 Identities=29% Similarity=0.362 Sum_probs=64.6
Q ss_pred ccEEEEEeecCCCCCeeee--eC---CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCC
Q psy9827 198 QTLRVQLSKSRKKDDFGII--LG---NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKE 272 (627)
Q Consensus 198 ~~~~V~L~k~~~~~~~gi~--~~---~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~ 272 (627)
....|.|.+.....+||+. .+ .|++|..|.++ ++|..+||++||+|++|||+++.++++.++..+++..+.
T Consensus 6 ~~~~v~l~k~~~~~~~G~~~~~~~~~~gv~V~~V~~~----spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~ 81 (91)
T 1m5z_A 6 ELHKVTLYKDSGMEDFGFSVADGLLEKGVYVKNIRPA----GPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAESGN 81 (91)
T ss_dssp EEEEEEEECCTTCSSSSEEEEECTTSSCEEEEEECTT----SHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTSTT
T ss_pred ceEEEEEEECCCCCCccEEEEeccCCCCEEEEEECCC----CHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 5567888886543344544 43 48999999887 455567899999999999999999989999999998888
Q ss_pred eEEEEEEeC
Q psy9827 273 KLSLTIRRE 281 (627)
Q Consensus 273 ~v~l~V~r~ 281 (627)
.+.|.|.|+
T Consensus 82 ~v~l~v~R~ 90 (91)
T 1m5z_A 82 KLDLVISRN 90 (91)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEeC
Confidence 999999885
No 232
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=98.82 E-value=1.5e-08 Score=84.67 Aligned_cols=79 Identities=19% Similarity=0.273 Sum_probs=63.5
Q ss_pred ccEEEEEeec-CCCCCeeeeeC----CcEEEEEeccCCCCCCCCCCC-CCCCCCEEEEeCceeCCCCCHHHHHHHHHcCC
Q psy9827 198 QTLRVQLSKS-RKKDDFGIILG----NKIFVKEVTHRLDNNASPGTH-QLAEGDVLLKINNHPTDGMSVKEARKLIDSSK 271 (627)
Q Consensus 198 ~~~~V~L~k~-~~~~~~gi~~~----~gi~V~~V~~g~~~~~~a~~~-~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~ 271 (627)
.+.+|.|.+. ..+.+|.+..+ .+++|..|.++ ++|..+ +|++||+|++|||+++.++++.++..+++..+
T Consensus 4 ~~~~v~l~k~~~~~lG~~i~~~~~~~~g~~V~~V~~~----spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~ 79 (90)
T 1qav_A 4 QRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKG----LAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTG 79 (90)
T ss_dssp SCEEEEEECCTTTCCCEEEEEEGGGTEEEEEEEECTT----SHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTCC
T ss_pred ccEEEEEEeCCCCCcCEEEEcccCCCCCEEEEEECCC----CHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 4567888874 34455555443 47999999887 344444 99999999999999999999999999999988
Q ss_pred CeEEEEEEe
Q psy9827 272 EKLSLTIRR 280 (627)
Q Consensus 272 ~~v~l~V~r 280 (627)
..+.|.|.|
T Consensus 80 ~~v~l~v~r 88 (90)
T 1qav_A 80 KEVVLEVKY 88 (90)
T ss_dssp SEEEEEEEE
T ss_pred CeEEEEEEE
Confidence 899999987
No 233
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=98.81 E-value=1.8e-08 Score=83.67 Aligned_cols=71 Identities=30% Similarity=0.409 Sum_probs=59.0
Q ss_pred CCCCCeeeeeC----CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEEEEEEeCC
Q psy9827 208 RKKDDFGIILG----NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREV 282 (627)
Q Consensus 208 ~~~~~~gi~~~----~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~l~V~r~~ 282 (627)
..+.||.+..+ .+++|..|.++ ++|..+||++||+|++|||+++.+++++++..+|+.....+.|.|.|++
T Consensus 11 ~~~lG~~l~~~~~~~~g~~V~~V~~~----spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~ 85 (87)
T 2pa1_A 11 PAPWGFRITGGRDFHTPIMVTKVAER----GKAKDADLRPGDIIVAINGESAEGMLHAEAQSKIRQSPSPLRLQLDRIT 85 (87)
T ss_dssp SSCCSEEEEEEGGGTEEEEEEEECSS----SHHHHTTCCTTCEEEEETTEESTTCCHHHHHHHHHTCCSSEEEEEEECC
T ss_pred CCccCEEEecccCCCCCEEEEEECCC----ChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEecC
Confidence 33445555544 28999999887 4566789999999999999999988899999999988899999999975
No 234
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.81 E-value=3.9e-08 Score=84.12 Aligned_cols=80 Identities=21% Similarity=0.359 Sum_probs=62.6
Q ss_pred ccEEEEEeecCCCCCeeeee--CC------cEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHc
Q psy9827 198 QTLRVQLSKSRKKDDFGIIL--GN------KIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDS 269 (627)
Q Consensus 198 ~~~~V~L~k~~~~~~~gi~~--~~------gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~ 269 (627)
....|.+.+... .+||+.+ .. +++|..|.++ ++|++.++|++||+|++|||+++.+++++++..+|+.
T Consensus 9 ~~~~v~l~k~~g-~~lG~~i~~~~~~~~~~~~~V~~V~~~---spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~ 84 (101)
T 2yt7_A 9 NCREVHLEKRRG-EGLGVALVESGWGSLLPTAVIANLLHG---GPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRE 84 (101)
T ss_dssp CCEEEEEECCTT-CCCCEEEEECCCSSSSCCEEEEEECTT---STTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHH
T ss_pred ceEEEEEEeCCC-CccCEEEEeCCCCCCccCEEEEEECCC---CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 445677776542 3555555 22 6999999987 3444458899999999999999988899999999998
Q ss_pred --CCCeEEEEEEeC
Q psy9827 270 --SKEKLSLTIRRE 281 (627)
Q Consensus 270 --~~~~v~l~V~r~ 281 (627)
.+..++|+|.|.
T Consensus 85 ~~~g~~v~l~v~R~ 98 (101)
T 2yt7_A 85 TKSQTSVTLSIVHC 98 (101)
T ss_dssp TTTSSEEEEEECCC
T ss_pred CCCCCeEEEEEEeC
Confidence 567999999874
No 235
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=98.81 E-value=2e-08 Score=85.07 Aligned_cols=80 Identities=23% Similarity=0.269 Sum_probs=64.9
Q ss_pred ccEEEEEeecC-CCCCeeeee-------C----CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHH
Q psy9827 198 QTLRVQLSKSR-KKDDFGIIL-------G----NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARK 265 (627)
Q Consensus 198 ~~~~V~L~k~~-~~~~~gi~~-------~----~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~ 265 (627)
.+..|.|.|.. .+.+|.+.. + .+++|..|.++ ++|..+||++||+|++|||+++.+++++++..
T Consensus 4 ~~r~v~l~k~~~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~----spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~ 79 (96)
T 2ego_A 4 QRKVLTLEKGDNQTFGFEIQTYGLHHREEQRVEMVTFVARVHES----SPAQLAGLTPGDTIASVNGLNVEGIRHREIVD 79 (96)
T ss_dssp CEEEEEEECCTTCCCSEEEEEEEC-------CCEEEEEEEECTT----CHHHHTTCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred ccEEEEEEeCCCCCccEEEEeccccccCCCCCCCCeEEEEECCC----ChHHHcCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 45678888875 355555554 1 27899999886 45667789999999999999999888999999
Q ss_pred HHHcCCCeEEEEEEeC
Q psy9827 266 LIDSSKEKLSLTIRRE 281 (627)
Q Consensus 266 ~l~~~~~~v~l~V~r~ 281 (627)
+|+..++.+.|+|.++
T Consensus 80 ~l~~~~~~v~l~v~~~ 95 (96)
T 2ego_A 80 IIKASGNVLRLETLYG 95 (96)
T ss_dssp HHHHTTTEEEEEEECC
T ss_pred HHHhCCCeEEEEEEEC
Confidence 9999888999999874
No 236
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=98.81 E-value=1.7e-08 Score=86.75 Aligned_cols=83 Identities=16% Similarity=0.267 Sum_probs=69.1
Q ss_pred CCccEEEEEeecCCCCCeeeeeCC---cEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHcCC
Q psy9827 196 EPQTLRVQLSKSRKKDDFGIILGN---KIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDSSK 271 (627)
Q Consensus 196 ~~~~~~V~L~k~~~~~~~gi~~~~---gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~ 271 (627)
.+....|.|.+...+.||.+..+. |++|..|.++ ++|..+| |++||+|++|||+++.++++.++...++..+
T Consensus 9 ~~~~~~v~l~k~~~glG~~~~~~~~~~gv~V~~V~~~----spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 84 (104)
T 3i4w_A 9 PREPRRIVIHRGSTGLGFNIVGGEXGEGIFISFILAG----GPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAG 84 (104)
T ss_dssp CSSCEEEEEECBTTBTSEEEEECC-CCCEEEEEECTT----SHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHTSC
T ss_pred CCccEEEEEEeCCCccCEEEECCCCCCCEEEEEECCC----ChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 345678889988666666666543 8999999887 4555667 9999999999999999999999999999988
Q ss_pred CeEEEEEEeCC
Q psy9827 272 EKLSLTIRREV 282 (627)
Q Consensus 272 ~~v~l~V~r~~ 282 (627)
..+.|+|.|+.
T Consensus 85 ~~v~l~v~r~~ 95 (104)
T 3i4w_A 85 QTVTIIAQYKP 95 (104)
T ss_dssp SEEEEEEEECH
T ss_pred CeEEEEEEECc
Confidence 99999999863
No 237
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.81 E-value=1.1e-08 Score=84.39 Aligned_cols=78 Identities=27% Similarity=0.364 Sum_probs=61.3
Q ss_pred EEEEEeecCCCCCeeeeeC----CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEE
Q psy9827 200 LRVQLSKSRKKDDFGIILG----NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLS 275 (627)
Q Consensus 200 ~~V~L~k~~~~~~~gi~~~----~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~ 275 (627)
+.|+|. +..+.+|.+..+ .+++|..|.++ ++|..++|++||+|++|||.++.++++.++..+++..++.+.
T Consensus 3 ~~v~l~-~~~~~G~~l~gg~~~~~~v~V~~V~~~----spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~ 77 (85)
T 1rgw_A 3 YSVTLT-GPGPWGFRLQGGKDFNMPLTISRITPG----SKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLS 77 (85)
T ss_dssp EEEEEC-CSSCCCEEECCCGGGTSCCBEEEECTT----SHHHHSSCCCCSBEEEETTEECTTCCHHHHHHHHTTCSSCEE
T ss_pred EEEEEe-CCCccCEEEEeccCCCCCeEEEEECCC----CHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHcCCCeEE
Confidence 456663 333444444433 37999999887 455568999999999999999999999999999988888899
Q ss_pred EEEEeCC
Q psy9827 276 LTIRREV 282 (627)
Q Consensus 276 l~V~r~~ 282 (627)
|.|.|++
T Consensus 78 l~v~R~~ 84 (85)
T 1rgw_A 78 LTLQKSK 84 (85)
T ss_dssp EEEESCC
T ss_pred EEEEeCC
Confidence 9998864
No 238
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.81 E-value=2.6e-08 Score=87.24 Aligned_cols=85 Identities=19% Similarity=0.286 Sum_probs=66.7
Q ss_pred CCccEEEEEeecCCCCCeeeee--C-------C----cEEEEEeccCCCCCCCCCC-CCCCCCCEEEEeCceeCCCCCHH
Q psy9827 196 EPQTLRVQLSKSRKKDDFGIIL--G-------N----KIFVKEVTHRLDNNASPGT-HQLAEGDVLLKINNHPTDGMSVK 261 (627)
Q Consensus 196 ~~~~~~V~L~k~~~~~~~gi~~--~-------~----gi~V~~V~~g~~~~~~a~~-~~L~~GD~Il~VNg~~v~~~s~~ 261 (627)
.+.+..|.|.+.. ..+|||.+ + . +++|..|.++ ++|.. ++|++||+|++|||+++.+++++
T Consensus 8 ~~~~~~v~l~~~~-~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~----spA~~~agL~~GD~I~~ing~~v~~~~~~ 82 (114)
T 1uew_A 8 SLQTSDVVIHRKE-NEGFGFVIISSLNRPESGSTITVPHKIGRIIDG----SPADRCAKLKVGDRILAVNGQSIINMPHA 82 (114)
T ss_dssp CCCCEEEEEECCT-TSCCCEEEECCCCSCCSSCCSCCSCEEEEECTT----CTTGGGSSCCTTCBEEEETTBCTTTSCHH
T ss_pred cccceEEEEEECC-CCCCCEEEEeecccCCCCcccccCeEEEEECCC----ChHHHhCCCCCCCEEEEECCEECCCCCHH
Confidence 4566788888753 23455544 2 1 5699999887 34445 89999999999999999988899
Q ss_pred HHHHHHHcCCCeEEEEEEeCCCCC
Q psy9827 262 EARKLIDSSKEKLSLTIRREVPRP 285 (627)
Q Consensus 262 e~~~~l~~~~~~v~l~V~r~~~~~ 285 (627)
++..+|+..+..+.|+|.|+....
T Consensus 83 ~~~~~l~~~g~~v~l~v~r~~~~~ 106 (114)
T 1uew_A 83 DIVKLIKDAGLSVTLRIIPQEELN 106 (114)
T ss_dssp HHHHHHHHTTTEEEEEECCCSCCC
T ss_pred HHHHHHHcCCCeEEEEEEeCCcCC
Confidence 999999998889999999976543
No 239
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.81 E-value=1.3e-08 Score=89.59 Aligned_cols=83 Identities=16% Similarity=0.298 Sum_probs=64.9
Q ss_pred ccEEEEEeecC-------CCCCeeeeeCC---------cEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCH
Q psy9827 198 QTLRVQLSKSR-------KKDDFGIILGN---------KIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSV 260 (627)
Q Consensus 198 ~~~~V~L~k~~-------~~~~~gi~~~~---------gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~ 260 (627)
....|.|.+.. .+.+|.+..+. |++|..|.++ ++|..++ |++||+|++|||+++.++++
T Consensus 12 ~~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~----s~A~~aG~L~~GD~Il~vng~~v~~~~~ 87 (117)
T 1ujd_A 12 PHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPG----GSAEQTGKLMEGMQVLEWNGIPLTSKTY 87 (117)
T ss_dssp CEEEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTT----CHHHHHSSCCTTCEEEEETTEECTTCCH
T ss_pred ceEEEEEEecCcccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCC----CHHHHcCCCCCCCEEEEECCEEcCCCCH
Confidence 34567777765 33444444332 7999999887 3444555 99999999999999999999
Q ss_pred HHHHHHHHcCCCeEEEEEEeCCCC
Q psy9827 261 KEARKLIDSSKEKLSLTIRREVPR 284 (627)
Q Consensus 261 ~e~~~~l~~~~~~v~l~V~r~~~~ 284 (627)
++++.+|+..+..+.|+|.|+...
T Consensus 88 ~~~~~~l~~~~~~v~l~v~R~~~~ 111 (117)
T 1ujd_A 88 EEVQSIISQQSGEAEICVRLDLNM 111 (117)
T ss_dssp HHHHHHHSCCSSCEEEEEESSCCC
T ss_pred HHHHHHHhcCCCEEEEEEEECCcc
Confidence 999999999889999999997653
No 240
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.80 E-value=3.5e-08 Score=86.74 Aligned_cols=83 Identities=19% Similarity=0.293 Sum_probs=66.2
Q ss_pred ccEEEEEeecC-CCCCeeeeeC-------------CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHH
Q psy9827 198 QTLRVQLSKSR-KKDDFGIILG-------------NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKE 262 (627)
Q Consensus 198 ~~~~V~L~k~~-~~~~~gi~~~-------------~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e 262 (627)
.+..|.|.+.. .+.+|.+..+ .|++|..|.++ ++|..+| |++||+|++|||+++.++++.+
T Consensus 15 ~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~----spA~~aG~L~~GD~Il~vng~~v~~~~~~~ 90 (117)
T 2ehr_A 15 PPRIVEIFREPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLED----SPAGKTNALKTGDKILEVSGVDLQNASHSE 90 (117)
T ss_dssp CCEEEEECCCSSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSS----STTTSSCSCCTTCEEEEESSCBCTTCCHHH
T ss_pred CCEEEEEEeCCCCccCEEEeCCcccccccccCCCcCCEEEEEeCCC----ChHHHcCCCCCCCEEEEECCEECCCCCHHH
Confidence 45678888763 3444544433 38999999887 3455566 9999999999999999999999
Q ss_pred HHHHHHcCCCeEEEEEEeCCCC
Q psy9827 263 ARKLIDSSKEKLSLTIRREVPR 284 (627)
Q Consensus 263 ~~~~l~~~~~~v~l~V~r~~~~ 284 (627)
++.+++..+..+.|+|.|....
T Consensus 91 ~~~~~~~~g~~v~l~v~r~~~~ 112 (117)
T 2ehr_A 91 AVEAIKNAGNPVVFIVQSLSST 112 (117)
T ss_dssp HHHHHHTSCSSEEEEECCBSCC
T ss_pred HHHHHHcCCCeEEEEEEECCCC
Confidence 9999999889999999886654
No 241
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=98.80 E-value=1.3e-08 Score=89.86 Aligned_cols=80 Identities=19% Similarity=0.237 Sum_probs=64.2
Q ss_pred ccEEEEEeecC-CCCCeeeeeC-------CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHH
Q psy9827 198 QTLRVQLSKSR-KKDDFGIILG-------NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLID 268 (627)
Q Consensus 198 ~~~~V~L~k~~-~~~~~gi~~~-------~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~ 268 (627)
....|.+.|.. .+.||.+..+ .|++|..|.++ ++|..+| |++||+|++|||+++.++++++++.+|+
T Consensus 24 ~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~gv~V~~V~~g----spA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 99 (118)
T 3b76_A 24 HEKVVNIQKDPGESLGMTVAGGASHREWDLPIYVISVEPG----GVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLK 99 (118)
T ss_dssp EEEEEEEECCTTCCCCEEEEECSCSTTCCCCEEEEEECTT----SHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHH
T ss_pred CcEEEEEEeCCCCccCEEEecCCCCCCCCCCEEEEEECCC----CHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 34567777653 4455555554 26999999887 3444555 9999999999999999999999999999
Q ss_pred cCCCeEEEEEEeC
Q psy9827 269 SSKEKLSLTIRRE 281 (627)
Q Consensus 269 ~~~~~v~l~V~r~ 281 (627)
..++.++|+|.|.
T Consensus 100 ~~~~~v~L~v~R~ 112 (118)
T 3b76_A 100 RTSSSIVLKALEV 112 (118)
T ss_dssp SCCSEEEEEEEEE
T ss_pred cCCCeEEEEEEEC
Confidence 9999999999884
No 242
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.80 E-value=1.6e-08 Score=89.03 Aligned_cols=86 Identities=22% Similarity=0.254 Sum_probs=68.3
Q ss_pred CCccEEEEEeecC-CCCCeeeeeC-----CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHH
Q psy9827 196 EPQTLRVQLSKSR-KKDDFGIILG-----NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLID 268 (627)
Q Consensus 196 ~~~~~~V~L~k~~-~~~~~gi~~~-----~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~ 268 (627)
....+.|.|.+.. .+.||.+..+ .+++|..|.++ ++|..+| |++||+|++|||+++.+++++++..+|+
T Consensus 13 ~~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~~V~~V~~~----spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~ 88 (117)
T 1v62_A 13 ASGPLMVEIVKTPGSALGISLTTTSLRNKSVITIDRIKPA----SVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLA 88 (117)
T ss_dssp SSSSEEEEEECCTTCCCCCEEEEECCSSSCEEEEEECCTT----SHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHH
T ss_pred CCCcEEEEEEcCCCCcccEEEEccCCCCCCCEEEEEECCC----CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3457788888865 4455555543 24999999987 3444555 9999999999999999899999999999
Q ss_pred cCCCeEEEEEEeCCCCC
Q psy9827 269 SSKEKLSLTIRREVPRP 285 (627)
Q Consensus 269 ~~~~~v~l~V~r~~~~~ 285 (627)
..+..+.|+|.|+....
T Consensus 89 ~~g~~v~l~v~r~~~~~ 105 (117)
T 1v62_A 89 SISEKVRLEILPVPQSQ 105 (117)
T ss_dssp SCSSEEEEEECCBTTBC
T ss_pred hCCCeEEEEEEECCCCC
Confidence 88899999999976643
No 243
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.80 E-value=3.6e-08 Score=81.93 Aligned_cols=79 Identities=16% Similarity=0.310 Sum_probs=62.6
Q ss_pred ccEEEEEeecCCCCCeeeeeC---CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHc--CCC
Q psy9827 198 QTLRVQLSKSRKKDDFGIILG---NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDS--SKE 272 (627)
Q Consensus 198 ~~~~V~L~k~~~~~~~gi~~~---~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~--~~~ 272 (627)
..+.|.|.|+..+.||.+... .+++|..| ++ ++|. ++|++||+|++|||+++.+++++++..+++. .+.
T Consensus 3 ~~~~v~l~k~~~g~G~~~~~~~~~~~~~v~~v-~~----spA~-aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~ 76 (88)
T 3bpu_A 3 ELITVHIVKGPMGFGFTIADSPGGGGQRVKQI-VD----SPRS-RGLKEGDLIVEVNKKNVQALTHNQVVDMLVESPKGS 76 (88)
T ss_dssp EEEEEEEECBTTBSSCEEEECTTSSSEEEEEC-CC------CC-TTCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTC
T ss_pred cEEEEEEEcCCCceeEEEEecCCCCcEEEEEe-cC----ChhH-hCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCC
Confidence 456788888766555555543 47899887 65 3445 7999999999999999999889999999985 467
Q ss_pred eEEEEEEeCC
Q psy9827 273 KLSLTIRREV 282 (627)
Q Consensus 273 ~v~l~V~r~~ 282 (627)
.+.|+|.|++
T Consensus 77 ~v~l~v~R~g 86 (88)
T 3bpu_A 77 EVTLLVQRQT 86 (88)
T ss_dssp EEEEEEEEEC
T ss_pred EEEEEEEeCC
Confidence 9999999865
No 244
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.79 E-value=1.7e-08 Score=84.63 Aligned_cols=81 Identities=38% Similarity=0.651 Sum_probs=65.8
Q ss_pred cEEEEEeecCCCCCeeeeeCCcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEEEE
Q psy9827 199 TLRVQLSKSRKKDDFGIILGNKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLT 277 (627)
Q Consensus 199 ~~~V~L~k~~~~~~~gi~~~~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~l~ 277 (627)
++.|.+.+......||+....|++|..|.++ ++|..+| |++||+|++|||+++.++++.++..+|+..++.+.|.
T Consensus 3 ~~~v~~~~~~~~~~~g~~~~~gv~V~~v~~~----s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~ 78 (92)
T 3cyy_A 3 PTKVTLVKSAKNEEYGLRLASHIFVKEISQD----SLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMV 78 (92)
T ss_dssp CEEEEEECSSTTSCCCEEEEEEEEEEEECTT----CHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEE
T ss_pred cEEEEEEeCCCCCCCCEEEeCCEEEEEECCC----ChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEE
Confidence 4566776665566788776689999999887 3555667 9999999999999999999999999999887899999
Q ss_pred EEeCCC
Q psy9827 278 IRREVP 283 (627)
Q Consensus 278 V~r~~~ 283 (627)
|.|++.
T Consensus 79 v~r~g~ 84 (92)
T 3cyy_A 79 VQRDER 84 (92)
T ss_dssp EEC---
T ss_pred EEeCCc
Confidence 998664
No 245
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=98.79 E-value=1.3e-08 Score=89.57 Aligned_cols=81 Identities=25% Similarity=0.387 Sum_probs=65.6
Q ss_pred ccEEEEEeecCCCCCeeeeeC---------CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHH
Q psy9827 198 QTLRVQLSKSRKKDDFGIILG---------NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLI 267 (627)
Q Consensus 198 ~~~~V~L~k~~~~~~~gi~~~---------~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l 267 (627)
....|.|.|+..+.||.+..+ .+++|..|.++ ++|..+| |++||+|++|||+++.++++++++.++
T Consensus 24 ~~~~v~l~k~~~glG~~i~gg~~~~~~~~~~gv~V~~V~~g----spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l 99 (117)
T 2byg_A 24 TVVEIKLFKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIDG----GAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAIL 99 (117)
T ss_dssp EEEEEEEECBTTBSSEEEEECTTSCSBTTBCCEEEEEECTT----SHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred ceEEEEEEeCCCCcCEEEEcccCCCCccCCCCEEEEEECCC----CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 346778887765555555543 37999999887 3444556 999999999999999999999999999
Q ss_pred HcCCCeEEEEEEeCC
Q psy9827 268 DSSKEKLSLTIRREV 282 (627)
Q Consensus 268 ~~~~~~v~l~V~r~~ 282 (627)
+..+..++|+|.|++
T Consensus 100 ~~~g~~v~l~v~R~~ 114 (117)
T 2byg_A 100 KNTSEVVYLKVGKPT 114 (117)
T ss_dssp HTCCSEEEEEEEEEE
T ss_pred HcCCCeEEEEEEeCC
Confidence 998899999999864
No 246
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.79 E-value=3.1e-08 Score=87.98 Aligned_cols=85 Identities=27% Similarity=0.309 Sum_probs=68.1
Q ss_pred CCccEEEEEeecCCCCCeeeeeC----CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHcC
Q psy9827 196 EPQTLRVQLSKSRKKDDFGIILG----NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDSS 270 (627)
Q Consensus 196 ~~~~~~V~L~k~~~~~~~gi~~~----~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~ 270 (627)
....+.|.|.+...+.+|.+..+ .+++|..|.++ ++|..+| |++||+|++|||+++.+++++++..+|+..
T Consensus 17 ~~~~~~v~l~~~~~glG~~~~~g~~~~~gv~V~~V~~~----spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 92 (123)
T 1ueq_A 17 KGTFLSTTLKKSNMGFGFTIIGGDEPDEFLQVKSVIPD----GPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSV 92 (123)
T ss_dssp CSEEEEEEEECCTTSCSEEEECCSSSSCCCEEEEECTT----SHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTS
T ss_pred CCcEEEEEEEeCCCceeEEEecccCCCCCEEEEEECCC----CHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 34566788888766555555543 36999999887 3555666 999999999999999999999999999984
Q ss_pred --CCeEEEEEEeCCCC
Q psy9827 271 --KEKLSLTIRREVPR 284 (627)
Q Consensus 271 --~~~v~l~V~r~~~~ 284 (627)
+..+.|+|.|+...
T Consensus 93 ~~g~~v~l~v~R~~~~ 108 (123)
T 1ueq_A 93 PIGQSVNLVLCRGYPL 108 (123)
T ss_dssp CTTCEEEEEEEESCCC
T ss_pred CCCCeEEEEEEeCCCC
Confidence 57999999997643
No 247
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=98.79 E-value=1.4e-08 Score=87.31 Aligned_cols=81 Identities=19% Similarity=0.229 Sum_probs=64.1
Q ss_pred cEEEEEeecC-CCCCeeeeeC----CcEEEEEeccCCCCCCCCCC-CCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCC
Q psy9827 199 TLRVQLSKSR-KKDDFGIILG----NKIFVKEVTHRLDNNASPGT-HQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKE 272 (627)
Q Consensus 199 ~~~V~L~k~~-~~~~~gi~~~----~gi~V~~V~~g~~~~~~a~~-~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~ 272 (627)
...|.|.+.. .+.||.+..+ .+++|..|.++ ++|.. ++|++||+|++|||+++.++++++++.+++..++
T Consensus 10 ~~~v~l~~~~~~~lG~~l~~g~~~~~~~~V~~V~~~----s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~ 85 (103)
T 2dc2_A 10 IRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPG----QPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRG 85 (103)
T ss_dssp EEEEEEECCSSSCCCEEEEEEGGGTEEEEEEEECTT----SHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHHCCS
T ss_pred cEEEEEEeCCCCccCEEEEeccCCCCCEEEEEECCC----CHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 3567777643 3445555543 37999999987 34444 7999999999999999999999999999999999
Q ss_pred eEEEEEEeCCC
Q psy9827 273 KLSLTIRREVP 283 (627)
Q Consensus 273 ~v~l~V~r~~~ 283 (627)
.++|+|.+...
T Consensus 86 ~v~l~v~~~~~ 96 (103)
T 2dc2_A 86 EIEFEVVYVAL 96 (103)
T ss_dssp EEEEEEEECC-
T ss_pred cEEEEEEecCC
Confidence 99999998654
No 248
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=98.79 E-value=1.8e-08 Score=83.11 Aligned_cols=77 Identities=19% Similarity=0.330 Sum_probs=61.6
Q ss_pred EEEEEeecCCCCCeeeeeC----CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHcC--CC
Q psy9827 200 LRVQLSKSRKKDDFGIILG----NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDSS--KE 272 (627)
Q Consensus 200 ~~V~L~k~~~~~~~gi~~~----~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~--~~ 272 (627)
++|+|.|...+.+|.+..+ .+++|..|.++ ++|..+| |++||+|++|||+++.+++++++..+++.. +.
T Consensus 2 ~~v~l~k~~~g~G~~i~~~~~~~~~~~V~~v~~~----spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~ 77 (85)
T 2i04_A 2 IHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLD----GPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGA 77 (85)
T ss_dssp EEEEEECBTTBSSEEEEECCSTTBCEEEEEECTT----SHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTC
T ss_pred EEEEEEECCCCCCEEEEcccCCCCCEEEEEECCC----ChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCC
Confidence 4677777766556655553 25999999887 3555567 999999999999999999999999999986 57
Q ss_pred eEEEEEEe
Q psy9827 273 KLSLTIRR 280 (627)
Q Consensus 273 ~v~l~V~r 280 (627)
.+.|+|.|
T Consensus 78 ~v~l~v~R 85 (85)
T 2i04_A 78 SVDLELCR 85 (85)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEEC
Confidence 88888865
No 249
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=98.79 E-value=3.3e-08 Score=88.95 Aligned_cols=85 Identities=14% Similarity=0.146 Sum_probs=67.4
Q ss_pred CCccEEEEEeecC-CCCCeeeeeCC----------------cEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCC
Q psy9827 196 EPQTLRVQLSKSR-KKDDFGIILGN----------------KIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGM 258 (627)
Q Consensus 196 ~~~~~~V~L~k~~-~~~~~gi~~~~----------------gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~ 258 (627)
......|+|.|.. .+.||.+..+. |++|..|.++ ++|..+||++||+|++|||+++.++
T Consensus 25 ~~~~r~v~l~r~~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~g----spA~~aGL~~GD~Il~Vng~~v~~~ 100 (132)
T 3l4f_D 25 IIKEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEG----GVAWRAGLRMGDFLIEVNGQNVVKV 100 (132)
T ss_dssp CCCCCEEEEECCTTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTT----SGGGGGTCCTTCEEEEESSSBCTTS
T ss_pred CCCCEEEEEEECCCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCC----CHHHHcCCCCCCEEEEECCEECCCC
Confidence 3456688888743 44555555542 5999999887 4556677999999999999999999
Q ss_pred CHHHHHHHHHcCCCeEEEEEEeCCCC
Q psy9827 259 SVKEARKLIDSSKEKLSLTIRREVPR 284 (627)
Q Consensus 259 s~~e~~~~l~~~~~~v~l~V~r~~~~ 284 (627)
++++++.+++..+..+.|+|.+....
T Consensus 101 ~~~~~~~~l~~~g~~v~l~v~~~~~~ 126 (132)
T 3l4f_D 101 GHRQVVNMIRQGGNTLMVKVVMVTRH 126 (132)
T ss_dssp CHHHHHHHHHHTTTEEEEEEECCCC-
T ss_pred CHHHHHHHHHcCCCEEEEEEEECCCC
Confidence 99999999999999999999986543
No 250
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.79 E-value=5.1e-08 Score=82.27 Aligned_cols=77 Identities=27% Similarity=0.372 Sum_probs=62.1
Q ss_pred EEEEEeecCCCCCeeeeeC------------CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHH
Q psy9827 200 LRVQLSKSRKKDDFGIILG------------NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLI 267 (627)
Q Consensus 200 ~~V~L~k~~~~~~~gi~~~------------~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l 267 (627)
++|.+.+.. ++||.+..+ .|++|..|.+++ +|.. +|++||+|++|||+++.++++.++...+
T Consensus 5 ~~v~l~~~~-~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~s----pA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~ 78 (95)
T 1mfg_A 5 IRVRVEKDP-ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEG----PASK-LLQPGDKIIQANGYSFINIEHGQAVSLL 78 (95)
T ss_dssp EEEEEECSS-SCSEEEEECBTSCCCSSSTTCCCEEEEEECTTS----TTTT-TCCTTCEEEEETTEECTTCBHHHHHHHH
T ss_pred EEEEECCCC-CCCEEEeCCcCccCCccccCCCCEEEEEECCCC----chhh-CCCCCCEEEEECCEEcCCCCHHHHHHHh
Confidence 456666654 556666543 389999999873 4444 9999999999999999998999999999
Q ss_pred HcCCCeEEEEEEeCC
Q psy9827 268 DSSKEKLSLTIRREV 282 (627)
Q Consensus 268 ~~~~~~v~l~V~r~~ 282 (627)
+..+..+.|+|.|+.
T Consensus 79 ~~~~~~v~l~v~R~~ 93 (95)
T 1mfg_A 79 KTFQNTVELIIVREV 93 (95)
T ss_dssp HHCCSEEEEEEEEEC
T ss_pred hcCCCeEEEEEEeCC
Confidence 988899999999864
No 251
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=98.78 E-value=1.6e-08 Score=83.89 Aligned_cols=78 Identities=19% Similarity=0.255 Sum_probs=61.4
Q ss_pred cEEEEEeecC-CCCCeeeeeC----CcEEEEEeccCCCCCCCCCC-CCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCC
Q psy9827 199 TLRVQLSKSR-KKDDFGIILG----NKIFVKEVTHRLDNNASPGT-HQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKE 272 (627)
Q Consensus 199 ~~~V~L~k~~-~~~~~gi~~~----~gi~V~~V~~g~~~~~~a~~-~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~ 272 (627)
+..|.|.+.. .+.+|.+..+ .+++|..|.++ ++|.. ++|++||+|++|||+++.++++.++..+++..++
T Consensus 3 ~~~v~l~~~~~~~lG~~i~~~~~~~~~~~V~~V~~g----spA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~ 78 (87)
T 4e34_A 3 IRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPG----QPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRG 78 (87)
T ss_dssp CEEEEEECCTTBCCCEEEEEEGGGTEEEEEEEECTT----SHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHHCCS
T ss_pred EEEEEEEECCCCcccEEEEccCCCCCCEEEEEECCC----CHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 3567777653 2444444443 36999999987 34444 7999999999999999999999999999999888
Q ss_pred eEEEEEEe
Q psy9827 273 KLSLTIRR 280 (627)
Q Consensus 273 ~v~l~V~r 280 (627)
.+.|+|.+
T Consensus 79 ~v~l~v~~ 86 (87)
T 4e34_A 79 EIEFEVVY 86 (87)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEE
Confidence 99998865
No 252
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.78 E-value=2.1e-08 Score=84.00 Aligned_cols=80 Identities=8% Similarity=0.162 Sum_probs=64.4
Q ss_pred CccEEEEEeecCCCCCeeeeeCCcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEEE
Q psy9827 197 PQTLRVQLSKSRKKDDFGIILGNKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSL 276 (627)
Q Consensus 197 ~~~~~V~L~k~~~~~~~gi~~~~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~l 276 (627)
.....+.+.+.....+||+....| +|..|.++ ++|..+||++||+|++|||+++.++++.++..+|+..+..+.|
T Consensus 10 ~~~~~~~i~~~~~~~~lG~~~~~G-~V~~V~~~----spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~v~l 84 (90)
T 1y7n_A 10 GNVTTVLIRRPDLRYQLGFSVQNG-IICSLMRG----GIAERGGVRVGHRIIEINGQSVVATPHEKIVHILSNAVGEIHM 84 (90)
T ss_dssp SSCEEEEEEESSTTSCCCEEEETT-EEEEECTT----SHHHHHTCCSSCEEEEETTEECTTSCHHHHHHHHHHCCEEEEE
T ss_pred CCcceEEEEeCCCccccCeEecCC-EEEEECCC----CHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 344556666655566777766556 89999887 4555678999999999999999888999999999988889999
Q ss_pred EEEeC
Q psy9827 277 TIRRE 281 (627)
Q Consensus 277 ~V~r~ 281 (627)
+|.+.
T Consensus 85 ~v~p~ 89 (90)
T 1y7n_A 85 KTMPA 89 (90)
T ss_dssp EEECC
T ss_pred EEEEC
Confidence 99863
No 253
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.78 E-value=1.6e-08 Score=90.51 Aligned_cols=83 Identities=22% Similarity=0.359 Sum_probs=66.4
Q ss_pred CccEEEEEeecCCCCCeeeee--C-------------CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCH
Q psy9827 197 PQTLRVQLSKSRKKDDFGIIL--G-------------NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSV 260 (627)
Q Consensus 197 ~~~~~V~L~k~~~~~~~gi~~--~-------------~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~ 260 (627)
.....|.|.|.....+|||.+ + .|++|..|.++ ++|..+| |++||+|++|||+++.++++
T Consensus 28 ~~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~----spA~~aG~L~~GD~Il~vng~~v~~~~~ 103 (128)
T 1nf3_C 28 ETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPG----GLAQSTGLLAVNDEVLEVNGIEVSGKSL 103 (128)
T ss_dssp TTCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTT----CHHHHHTCCCTTCEEEEETTEESTTCCH
T ss_pred CccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCC----CHHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 345678888875444555554 2 37999999887 3444556 99999999999999999999
Q ss_pred HHHHHHHHcCCCeEEEEEEeCCC
Q psy9827 261 KEARKLIDSSKEKLSLTIRREVP 283 (627)
Q Consensus 261 ~e~~~~l~~~~~~v~l~V~r~~~ 283 (627)
+++..+++..++.+.|+|.|++.
T Consensus 104 ~~~~~~l~~~~~~v~l~v~r~~~ 126 (128)
T 1nf3_C 104 DQVTDMMIANSRNLIITVRPANQ 126 (128)
T ss_dssp HHHHHHHHHTTTSEEEEEECCCC
T ss_pred HHHHHHHHcCCCeEEEEEEECCc
Confidence 99999999888899999999764
No 254
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=98.77 E-value=2.5e-08 Score=83.63 Aligned_cols=81 Identities=21% Similarity=0.329 Sum_probs=64.8
Q ss_pred ccEEEEEeecC-CCCCeeeeeC---CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHcCCC
Q psy9827 198 QTLRVQLSKSR-KKDDFGIILG---NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDSSKE 272 (627)
Q Consensus 198 ~~~~V~L~k~~-~~~~~gi~~~---~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~ 272 (627)
..+.|+|.+.. .+.||.+..+ .|++|..|.++ ++|..+| |++||+|++|||+++.+++++++..+++..++
T Consensus 4 ~~~~v~l~k~~~~~lG~~~~~~~~~~gv~V~~V~~~----spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~ 79 (92)
T 2qg1_A 4 DTLTIGLQKKPGKGLGLSIVGKRNDTGVFVSDIVKG----GIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSLG 79 (92)
T ss_dssp CEEEEEEECCTTSCCSEEEECCSSSCSCEEEEECTT----SHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCS
T ss_pred eEEEEEEEeCCCCcccEEEEeccCCCCEEEEEECCC----CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 45678888753 3444444433 48999999887 3455566 99999999999999999999999999999889
Q ss_pred eEEEEEEeCC
Q psy9827 273 KLSLTIRREV 282 (627)
Q Consensus 273 ~v~l~V~r~~ 282 (627)
.+.|+|.|..
T Consensus 80 ~v~l~v~R~~ 89 (92)
T 2qg1_A 80 TVTLEVGRIS 89 (92)
T ss_dssp EEEEEEECCC
T ss_pred eEEEEEEccc
Confidence 9999999865
No 255
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.77 E-value=1.9e-08 Score=87.32 Aligned_cols=81 Identities=15% Similarity=0.174 Sum_probs=65.4
Q ss_pred cEEEEEeecCCCCCeeeeeCCcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCe-EEEE
Q psy9827 199 TLRVQLSKSRKKDDFGIILGNKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEK-LSLT 277 (627)
Q Consensus 199 ~~~V~L~k~~~~~~~gi~~~~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~-v~l~ 277 (627)
+..|.|.|+..+.||.+....+++|..|.++ ++|..+||++||+|++|||.++.+++++++..+++..++. +.|+
T Consensus 24 ~r~v~l~k~~~~~G~~l~~~~~v~V~~V~~g----spA~~AGL~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~~~v~l~ 99 (109)
T 2vsv_A 24 PRSIRFTAEEGDLGFTLRGNAPVQVHFLDPY----CSASVAGAREGDYIVSIQLVDCKWLTLSEVMKLLKSFGEDEIEMK 99 (109)
T ss_dssp CEEEEECCGGGCCCEEEESSSSCEEEEECTT----SHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTSCEEEE
T ss_pred CEEEEEEeCCCceeEEEeCCCCeEEEEECCC----CHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEE
Confidence 4577788765555555555578999999886 4666789999999999999999999999999999987764 9999
Q ss_pred EEeCCC
Q psy9827 278 IRREVP 283 (627)
Q Consensus 278 V~r~~~ 283 (627)
|.|...
T Consensus 100 V~~~~~ 105 (109)
T 2vsv_A 100 VVSLLD 105 (109)
T ss_dssp EESCC-
T ss_pred EEECCC
Confidence 988543
No 256
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=98.77 E-value=2.4e-08 Score=87.15 Aligned_cols=82 Identities=22% Similarity=0.330 Sum_probs=67.5
Q ss_pred CccEEEEEeecCCCCCeeeeeC----CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHcCC
Q psy9827 197 PQTLRVQLSKSRKKDDFGIILG----NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDSSK 271 (627)
Q Consensus 197 ~~~~~V~L~k~~~~~~~gi~~~----~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~ 271 (627)
.....|.|.+...+.||.+..+ .|++|..|.++ ++|..+| |++||+|++|||+++.++++.++..+++..+
T Consensus 23 ~~~~~v~l~~~~~glG~~l~~~~~~~~gv~V~~V~~~----spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g 98 (112)
T 2r4h_A 23 MDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAED----GPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKNGG 98 (112)
T ss_dssp CCEEEEEEECBTTBTSEEEEECGGGTCCEEEEEECTT----SHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHTTT
T ss_pred CceEEEEEEcCCCccCEEEeccccCCCCEEEEEECCC----ChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 3567788888766666666554 48999999887 3555667 9999999999999999999999999999888
Q ss_pred CeEEEEEEeCC
Q psy9827 272 EKLSLTIRREV 282 (627)
Q Consensus 272 ~~v~l~V~r~~ 282 (627)
..+.|+|.|++
T Consensus 99 ~~v~l~v~R~~ 109 (112)
T 2r4h_A 99 RRVRLFLKRGE 109 (112)
T ss_dssp TEEEEEEECCE
T ss_pred CeEEEEEEeCC
Confidence 89999998864
No 257
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=98.77 E-value=1.2e-08 Score=88.50 Aligned_cols=83 Identities=17% Similarity=0.281 Sum_probs=64.7
Q ss_pred ccEEEEEeec-CCCCCeeeeeC------CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHc
Q psy9827 198 QTLRVQLSKS-RKKDDFGIILG------NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDS 269 (627)
Q Consensus 198 ~~~~V~L~k~-~~~~~~gi~~~------~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~ 269 (627)
..++|.|.|. ..+.+|.+..+ .+++|.+|.++ ++|..+| |++||+|++|||+++.++++++++.+|+.
T Consensus 5 ~~~~v~l~k~~~~~lG~~i~g~~~~~~~~gv~V~~V~~~----spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 80 (108)
T 3cbz_A 5 NIITVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKG----GAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRD 80 (108)
T ss_dssp CEEEEEECHHHHCCCCEEEEEECSSTTCCEEEEEEECTT----SHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHH
T ss_pred eEEEEEEEeCCCCccCEEEEcCcCCCCCCCEEEEEECCC----ChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 4567788763 34556655553 48999999987 3444455 99999999999999999999999999997
Q ss_pred C---CCeEEEEEEeCCCC
Q psy9827 270 S---KEKLSLTIRREVPR 284 (627)
Q Consensus 270 ~---~~~v~l~V~r~~~~ 284 (627)
. .+.++|+|.|....
T Consensus 81 ~~~~~~~v~l~v~R~~~~ 98 (108)
T 3cbz_A 81 IVHKPGPIVLTVAKSGGG 98 (108)
T ss_dssp HHTSSSCEEEEEECCCC-
T ss_pred cccCCCeEEEEEEeCCCC
Confidence 6 56899999997654
No 258
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.77 E-value=1.7e-08 Score=89.26 Aligned_cols=83 Identities=19% Similarity=0.357 Sum_probs=68.3
Q ss_pred ccEEEEEeecCCCCCeeeeeC---------CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHH
Q psy9827 198 QTLRVQLSKSRKKDDFGIILG---------NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLI 267 (627)
Q Consensus 198 ~~~~V~L~k~~~~~~~gi~~~---------~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l 267 (627)
....|.|.|...+.+|.+..+ .+++|..|.++ ++|..++ |++||+|++|||+++.++++.+++.++
T Consensus 17 ~~~~v~l~r~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~----spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~ 92 (120)
T 2eno_A 17 TEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKEN----GAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLF 92 (120)
T ss_dssp EEEEEEEECCSSSCSEEEECCTTTCSSSSCCSEEEEEECSS----SHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHH
T ss_pred ceEEEEEEECCCCCCEEEecccCCccccCCCCEEEEEECCC----ChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 456788888776666666652 38999999887 3455566 999999999999999999999999999
Q ss_pred HcCCCeEEEEEEeCCCC
Q psy9827 268 DSSKEKLSLTIRREVPR 284 (627)
Q Consensus 268 ~~~~~~v~l~V~r~~~~ 284 (627)
+..+..+.|+|.|+...
T Consensus 93 ~~~g~~v~l~v~R~~~~ 109 (120)
T 2eno_A 93 RNAGYAVSLRVQHRLQV 109 (120)
T ss_dssp HHHCSEEEEEEEEEEEC
T ss_pred HcCCCeEEEEEEeCCcC
Confidence 98888999999997654
No 259
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=98.77 E-value=1.1e-08 Score=91.37 Aligned_cols=82 Identities=23% Similarity=0.259 Sum_probs=63.1
Q ss_pred cEEEEEe-ecCCCCCeeeeeC--------CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHH
Q psy9827 199 TLRVQLS-KSRKKDDFGIILG--------NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLID 268 (627)
Q Consensus 199 ~~~V~L~-k~~~~~~~gi~~~--------~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~ 268 (627)
.+.|.|. +...+.||.+..+ .+++|..|.++ ++|..+| |++||+|++|||+++.++++.+++.+|+
T Consensus 26 ~~~v~l~k~~~~glG~~i~~~~~~~~~~~~gi~V~~V~~g----spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 101 (127)
T 1wg6_A 26 TLEIPLNDSGSAGLGVSLKGNKSRETGTDLGIFIKSIIHG----GAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLR 101 (127)
T ss_dssp EEEEECSSSTTTCCCCEEEEEEETTTTEEEEEEEEECCSS----SSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHH
T ss_pred EEEEEEeeCCCCccCeEEecccCCCCCCCCCEEEEEECCC----CHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3455555 3444555555543 27999999987 3444455 9999999999999999999999999999
Q ss_pred cC-------CCeEEEEEEeCCCC
Q psy9827 269 SS-------KEKLSLTIRREVPR 284 (627)
Q Consensus 269 ~~-------~~~v~l~V~r~~~~ 284 (627)
.+ +..|+|+|.|+...
T Consensus 102 ~~~~~~g~~~~~v~l~v~R~~~~ 124 (127)
T 1wg6_A 102 RSMSMEGNIRGMIQLVILRRSGP 124 (127)
T ss_dssp HHHHHHHHHTCEEEEEEEECSCS
T ss_pred HhhccccCCCCEEEEEEEeCCCC
Confidence 76 78999999997653
No 260
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.77 E-value=2.7e-08 Score=85.55 Aligned_cols=83 Identities=22% Similarity=0.262 Sum_probs=66.4
Q ss_pred CccEEEEEeecC-CCCCeeeeeC----CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCC
Q psy9827 197 PQTLRVQLSKSR-KKDDFGIILG----NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSK 271 (627)
Q Consensus 197 ~~~~~V~L~k~~-~~~~~gi~~~----~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~ 271 (627)
..+..|.|.+.. ...||.+..+ .+++|..|.++ ++|..++|++||+|++|||+++.+++++++..+|+. +
T Consensus 14 ~~~~~v~l~k~~~~~lG~~~~~~~~~~~g~~V~~V~~~----spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~-~ 88 (104)
T 1wi2_A 14 FLPRIVTLKKPPGAQLGFNIRGGKASQLGIFISKVIPD----SDAHRAGLQEGDQVLAVNDVDFQDIEHSKAVEILKT-A 88 (104)
T ss_dssp SCCEEEEECCCTTCCCSEEEECCSSSCCCCEEEEECTT----SHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHHH-S
T ss_pred CCCEEEEEEeCCCCCccEEEEcccCCCCCEEEEEeCCC----ChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhC-C
Confidence 345778888865 4445555443 37999999887 455567899999999999999998889999999998 7
Q ss_pred CeEEEEEEeCCCC
Q psy9827 272 EKLSLTIRREVPR 284 (627)
Q Consensus 272 ~~v~l~V~r~~~~ 284 (627)
..+.|+|.|+..+
T Consensus 89 ~~v~l~v~r~~~~ 101 (104)
T 1wi2_A 89 REISMRVRFFSGP 101 (104)
T ss_dssp SSEEEEEECCCCS
T ss_pred CEEEEEEEECCCC
Confidence 8899999987554
No 261
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.76 E-value=2.1e-08 Score=87.30 Aligned_cols=83 Identities=19% Similarity=0.366 Sum_probs=67.8
Q ss_pred ccEEEEEeecCCCCCeeeeeC--CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeE
Q psy9827 198 QTLRVQLSKSRKKDDFGIILG--NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKL 274 (627)
Q Consensus 198 ~~~~V~L~k~~~~~~~gi~~~--~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v 274 (627)
....|.|.+...+.||.+..+ .|++|..|.++ ++|..+| |++||+|++|||+++.+++++++..+++..+..+
T Consensus 15 ~~~~v~l~~~~~~lG~~l~~~~~~g~~V~~V~~~----spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v 90 (111)
T 2dlu_A 15 HVEEVELINDGSGLGFGIVGGKTSGVVVRTIVPG----GLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCGNSV 90 (111)
T ss_dssp EEEEEEEECCSSCCCEEEECCSSSSBEEEEECTT----SSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHHCSEE
T ss_pred ceEEEEEEeCCCccCEEEeccCCCCEEEEEECCC----CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 356788887766666666554 58999999887 3555566 9999999999999999999999999999888899
Q ss_pred EEEEEeCCCC
Q psy9827 275 SLTIRREVPR 284 (627)
Q Consensus 275 ~l~V~r~~~~ 284 (627)
.|+|.|+...
T Consensus 91 ~l~v~R~~~~ 100 (111)
T 2dlu_A 91 RMLVARDPAG 100 (111)
T ss_dssp EEEEEESCTT
T ss_pred EEEEEeCCCC
Confidence 9999997654
No 262
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=98.76 E-value=1.9e-08 Score=94.50 Aligned_cols=81 Identities=26% Similarity=0.357 Sum_probs=66.3
Q ss_pred ccEEEEEeecCCCCCeeeee---C-------CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHH
Q psy9827 198 QTLRVQLSKSRKKDDFGIIL---G-------NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLI 267 (627)
Q Consensus 198 ~~~~V~L~k~~~~~~~gi~~---~-------~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l 267 (627)
..+.|.|.++..+.||.+.. + .|++|..|.+|+ +|++.+.|++||+|++|||+++.++++.+++.+|
T Consensus 80 ~~~~v~l~k~~~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gs---pA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l 156 (170)
T 3egg_C 80 ELFPVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGG---AAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVL 156 (170)
T ss_dssp EEEEEEEECBTTBSSEEEEEECSSSSCCSSSBEEEEEEECTTS---HHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHH
T ss_pred eEEEEEEEeCCCeEeEEEEecccCCccccCCCCEEEEEECCCC---hHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 45678888877666666665 1 379999999873 3344444999999999999999999999999999
Q ss_pred HcCCCeEEEEEEeC
Q psy9827 268 DSSKEKLSLTIRRE 281 (627)
Q Consensus 268 ~~~~~~v~l~V~r~ 281 (627)
+.++..++|+|.|+
T Consensus 157 ~~~g~~v~L~V~R~ 170 (170)
T 3egg_C 157 RNTKGRVRFMIGRE 170 (170)
T ss_dssp HHCCSEEEEEEEEC
T ss_pred HcCCCEEEEEEEeC
Confidence 99999999999884
No 263
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.76 E-value=1.7e-08 Score=85.96 Aligned_cols=79 Identities=22% Similarity=0.219 Sum_probs=63.3
Q ss_pred EEEEeecCCCCCeeeeeCC-----------cEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHc
Q psy9827 201 RVQLSKSRKKDDFGIILGN-----------KIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDS 269 (627)
Q Consensus 201 ~V~L~k~~~~~~~gi~~~~-----------gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~ 269 (627)
.|.+.+...+.||.+.... |++|..|.++ ++|..+||++||+|++|||+++.+++++++..+++.
T Consensus 5 ~v~l~~~~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~----spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~ 80 (99)
T 3khf_A 5 PIVIHSSGKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDG----SPAQEAGLRAGDLITHINGESVLGLVHMDVVELLLK 80 (99)
T ss_dssp CEEEEC-CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTT----SHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred CEEEEeCCCCCcEEEEecccccCccccccCCeEEEEECCC----CHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 4566666555555555321 6789999886 456667899999999999999999999999999999
Q ss_pred CCCeEEEEEEeCCC
Q psy9827 270 SKEKLSLTIRREVP 283 (627)
Q Consensus 270 ~~~~v~l~V~r~~~ 283 (627)
.+..+.|+|.|++.
T Consensus 81 ~g~~v~l~v~r~~~ 94 (99)
T 3khf_A 81 SGNKISLRTTALEN 94 (99)
T ss_dssp SCSEEEEEEECSCS
T ss_pred CCCEEEEEEEECCC
Confidence 99999999999764
No 264
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.76 E-value=3.4e-08 Score=85.79 Aligned_cols=83 Identities=24% Similarity=0.365 Sum_probs=64.6
Q ss_pred CCccEEEEEeecCCCCCeeeeeC------CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHH
Q psy9827 196 EPQTLRVQLSKSRKKDDFGIILG------NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLID 268 (627)
Q Consensus 196 ~~~~~~V~L~k~~~~~~~gi~~~------~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~ 268 (627)
.+....|.+.|. .+.+|.+.++ .+++|..|.++ ++|..++ |++||+|++|||+++.++++++++++|+
T Consensus 13 ~~~~~~v~l~k~-~glG~~i~gg~~~~~~~~~~V~~v~~~----s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~ 87 (109)
T 1wi4_A 13 DPAFRVITVTKE-TGLGLKILGGINRNEGPLVYIHEVIPG----GDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIIT 87 (109)
T ss_dssp CTTEEEEEECCS-SCCCEEEEECSSSSSCSSEEEEEECTT----SHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHH
T ss_pred CCcEEEEEEeCC-CccCEEEEeccCCCCCCCEEEEEeCCC----ChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 345566777775 4555555543 26999999987 3444455 9999999999999999999999999999
Q ss_pred cCC----CeEEEEEEeCCC
Q psy9827 269 SSK----EKLSLTIRREVP 283 (627)
Q Consensus 269 ~~~----~~v~l~V~r~~~ 283 (627)
.+. ..++|.+.|+..
T Consensus 88 ~~~~r~~~~~~l~v~R~~~ 106 (109)
T 1wi4_A 88 RAKLRSESPWEIAFIRSGP 106 (109)
T ss_dssp HSCCSSSSCEEEEEECCCC
T ss_pred ccccCCCceEEEEEEeCCC
Confidence 865 589999999754
No 265
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.76 E-value=2.5e-08 Score=83.15 Aligned_cols=80 Identities=23% Similarity=0.325 Sum_probs=63.2
Q ss_pred cEEEEEeecCCCCCeeeeeC----CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeE
Q psy9827 199 TLRVQLSKSRKKDDFGIILG----NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKL 274 (627)
Q Consensus 199 ~~~V~L~k~~~~~~~gi~~~----~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v 274 (627)
.+.|++. +..+.||.+..+ .+++|..|.++ ++|..+||++||+|++|||+++.++++.++..+++..+..+
T Consensus 4 ~~~v~~~-~~~~~G~~l~gg~~~~~~v~V~~V~~~----spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v 78 (89)
T 2q3g_A 4 SFKVVLE-GPAPWGFRLQGGKDFNVPLSISRLTPG----GKAAQAGVAVGDWVLSIDGENAGSLTHIEAQNKIRACGERL 78 (89)
T ss_dssp EEEEEEE-SSSCCCEEEEEEGGGTEEEEEEEECTT----SHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHTCTTEE
T ss_pred EEEEEEc-CCCcccEEEECcCCCCCCEEEEEECCC----CHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEE
Confidence 3456664 334455555442 37999999886 45666789999999999999999999999999999888899
Q ss_pred EEEEEeCCC
Q psy9827 275 SLTIRREVP 283 (627)
Q Consensus 275 ~l~V~r~~~ 283 (627)
.|+|.|++.
T Consensus 79 ~l~v~R~~~ 87 (89)
T 2q3g_A 79 SLGLSRAIT 87 (89)
T ss_dssp EEEEEEECC
T ss_pred EEEEEeCCC
Confidence 999998654
No 266
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=98.76 E-value=2.2e-08 Score=85.08 Aligned_cols=80 Identities=24% Similarity=0.300 Sum_probs=62.7
Q ss_pred cEEEEEee-cCCCCCeeeeeC----------CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHH
Q psy9827 199 TLRVQLSK-SRKKDDFGIILG----------NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKL 266 (627)
Q Consensus 199 ~~~V~L~k-~~~~~~~gi~~~----------~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~ 266 (627)
...|+|.| ...+.||.+..+ .+++|..|.++ ++|..+| |++||+|++|||+++.++++.++..+
T Consensus 6 ~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~----spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~ 81 (98)
T 1ihj_A 6 IHMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPD----SPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDL 81 (98)
T ss_dssp EEEEEEECTTSSSCCEEEEEEEECCSSSCCEEEEEEEEECTT----SHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred EEEEEEEeCCCCCcCEEEeccccCCccccCCCCEEEEEECCC----CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 35677777 333444444332 27999999887 4555667 99999999999999999999999999
Q ss_pred HHcCCCeEEEEEEeCC
Q psy9827 267 IDSSKEKLSLTIRREV 282 (627)
Q Consensus 267 l~~~~~~v~l~V~r~~ 282 (627)
++..+..+.|+|.|++
T Consensus 82 l~~~g~~v~l~v~R~g 97 (98)
T 1ihj_A 82 IKEADFKIELEIQTFD 97 (98)
T ss_dssp HHHSCSEEEEEEEEC-
T ss_pred HhcCCCeEEEEEEeCC
Confidence 9998889999999964
No 267
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=98.76 E-value=3.4e-08 Score=85.35 Aligned_cols=82 Identities=21% Similarity=0.248 Sum_probs=65.2
Q ss_pred ccEEEEEeecCCCCCeeeeeC----------------CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHH
Q psy9827 198 QTLRVQLSKSRKKDDFGIILG----------------NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVK 261 (627)
Q Consensus 198 ~~~~V~L~k~~~~~~~gi~~~----------------~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~ 261 (627)
.+..|.|.|...+.+|.+..+ .+++|..|.++ ++|..+||++||+|++|||+++.+++++
T Consensus 6 ~~r~v~l~k~~~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~----spA~~aGl~~GD~I~~ing~~v~~~~~~ 81 (107)
T 3qe1_A 6 SPRVVRIVKSESGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPG----GAADRAGVRKGDRILEVNGVNVEGATHK 81 (107)
T ss_dssp CCEEEEEECBTTBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTT----SHHHHHTCCTTCEEEEETTEECTTCCHH
T ss_pred CcEEEEEEECCCCCCEEEEcccccCCcceeccccccCCceEEEEECCC----CHHHHcCCCCCCEEEEECCEECCCCCHH
Confidence 346778888765544444433 12469999887 4556677999999999999999999999
Q ss_pred HHHHHHHcCCCeEEEEEEeCCC
Q psy9827 262 EARKLIDSSKEKLSLTIRREVP 283 (627)
Q Consensus 262 e~~~~l~~~~~~v~l~V~r~~~ 283 (627)
++..+++..+..+.|+|.|...
T Consensus 82 ~~~~~l~~~g~~v~l~v~r~~~ 103 (107)
T 3qe1_A 82 QVVDLIRAGEKELILTVLSVES 103 (107)
T ss_dssp HHHHHHHHCSSEEEEEEECSSC
T ss_pred HHHHHHHcCCCEEEEEEEcCCC
Confidence 9999999988999999998654
No 268
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.75 E-value=6.5e-09 Score=90.59 Aligned_cols=86 Identities=22% Similarity=0.314 Sum_probs=68.2
Q ss_pred CCccEEEEEeecC-CCCCeeeeeCC-------------cEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCH
Q psy9827 196 EPQTLRVQLSKSR-KKDDFGIILGN-------------KIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSV 260 (627)
Q Consensus 196 ~~~~~~V~L~k~~-~~~~~gi~~~~-------------gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~ 260 (627)
.+....|.|.|.. .+.+|.+..+. |++|..|.++ ++|..++ |++||+|++|||+++.++++
T Consensus 7 ~~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~----spA~~aG~L~~GD~Il~vng~~v~~~~~ 82 (111)
T 1uju_A 7 GPGLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPT----GAAGRDGRLRVGLRLLEVNQQSLLGLTH 82 (111)
T ss_dssp SCSSSCEEEECCTTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTT----SHHHHHSSCCTTCBCCBBSSCBCTTSCH
T ss_pred CCccEEEEEEECCCCccCEEEECCccccccccccCCCCCEEEEEECCC----CHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 4456678888764 44555555432 6899999887 3555566 99999999999999999999
Q ss_pred HHHHHHHHcCCCeEEEEEEeCCCCC
Q psy9827 261 KEARKLIDSSKEKLSLTIRREVPRP 285 (627)
Q Consensus 261 ~e~~~~l~~~~~~v~l~V~r~~~~~ 285 (627)
.+++.+++..+..+.|+|.|+....
T Consensus 83 ~~~~~~l~~~g~~v~l~v~r~~~~~ 107 (111)
T 1uju_A 83 GEAVQLLRSVGDTLTVLVCDGFESG 107 (111)
T ss_dssp HHHHHHHSSCSSEEEECCCCCCCCS
T ss_pred HHHHHHHHcCCCeEEEEEEECCCCC
Confidence 9999999998889999999876543
No 269
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=98.75 E-value=1.5e-08 Score=88.61 Aligned_cols=83 Identities=25% Similarity=0.378 Sum_probs=68.2
Q ss_pred ccEEEEEeecCCCCCeeeee---C-------CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHH
Q psy9827 198 QTLRVQLSKSRKKDDFGIIL---G-------NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKL 266 (627)
Q Consensus 198 ~~~~V~L~k~~~~~~~gi~~---~-------~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~ 266 (627)
..+.|.|.+...+.||.+.. + .|++|..|.++ ++|..+| |++||+|++|||+++.++++.++..+
T Consensus 4 ~~~~v~l~k~~~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~----s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~ 79 (113)
T 2g5m_B 4 ELFPVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEG----GAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASV 79 (113)
T ss_dssp EEEEEECCCCSSCCCCEEEEEECCCCSSSCCEEEEEEECCTT----SHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHH
T ss_pred EEEEEEEEeCCCCCCEEEEecCCCCcCCCCCCCEEEEEECCC----CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 45677787776666666665 1 38999999887 3455566 99999999999999999999999999
Q ss_pred HHcCCCeEEEEEEeCCCC
Q psy9827 267 IDSSKEKLSLTIRREVPR 284 (627)
Q Consensus 267 l~~~~~~v~l~V~r~~~~ 284 (627)
++..+..+.|.|.|+...
T Consensus 80 ~~~~g~~v~l~v~R~~~~ 97 (113)
T 2g5m_B 80 LRNTKGRVRFMIGRERPG 97 (113)
T ss_dssp HHHSCSSCEEEEEECCCC
T ss_pred HhcCCCeEEEEEEeCCCC
Confidence 999999999999997654
No 270
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.75 E-value=2.7e-08 Score=87.73 Aligned_cols=85 Identities=18% Similarity=0.219 Sum_probs=65.4
Q ss_pred CCccEEEEEeecCCC-CCeeeeeCC----cEEEEEeccCCCCCCCCCC-CCCCCCCEEEEeCceeCCCCCHHHHHHHHHc
Q psy9827 196 EPQTLRVQLSKSRKK-DDFGIILGN----KIFVKEVTHRLDNNASPGT-HQLAEGDVLLKINNHPTDGMSVKEARKLIDS 269 (627)
Q Consensus 196 ~~~~~~V~L~k~~~~-~~~gi~~~~----gi~V~~V~~g~~~~~~a~~-~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~ 269 (627)
....+.|.|.|...+ .+|.+..+. +++|..|.+++ +|++. ++|++||+|++|||+++.++++.++..+++.
T Consensus 13 ~~~~~~v~l~k~~~~~~G~~l~gg~~~~~~v~V~~V~~~s---pA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~ 89 (119)
T 2cs5_A 13 HDNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGT---PADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKA 89 (119)
T ss_dssp SSCCEEEEECCCSSSCCSEEEEEEGGGTEEEEEEEECSSS---TTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHH
T ss_pred CCCeEEEEEEeCCCCCcCEEEecccCCCCCeEEEEECCCC---HHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 335677888886533 555555442 79999999873 33333 4999999999999999999999999999998
Q ss_pred CC----CeEEEEEEeCCC
Q psy9827 270 SK----EKLSLTIRREVP 283 (627)
Q Consensus 270 ~~----~~v~l~V~r~~~ 283 (627)
.+ ..+.|+|.|+..
T Consensus 90 ~~~~~~~~v~l~v~R~~~ 107 (119)
T 2cs5_A 90 SCERHSGELMLLVRPNAV 107 (119)
T ss_dssp HHHCCSSCEEEEEECCCC
T ss_pred ccccCCCEEEEEEEcccc
Confidence 64 489999998643
No 271
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.74 E-value=1.9e-08 Score=87.16 Aligned_cols=84 Identities=17% Similarity=0.363 Sum_probs=65.5
Q ss_pred CCccEEEEEeecCCCCCeeeee--C---------CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHH
Q psy9827 196 EPQTLRVQLSKSRKKDDFGIIL--G---------NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEA 263 (627)
Q Consensus 196 ~~~~~~V~L~k~~~~~~~gi~~--~---------~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~ 263 (627)
....+.|.|.+.....+|||.+ + .+++|..|.++ ++|..+| |++||+|++|||+++.++++.++
T Consensus 10 ~~~~~~v~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~----spA~~aG~l~~GD~I~~vng~~v~~~~~~~~ 85 (108)
T 2jre_A 10 GFSLYSVELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPG----SAAALDGRIEPNDKILRVDDVNVQGMAQSDV 85 (108)
T ss_dssp SCEEEEEEEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTT----SHHHHHSSCCSSEEEEEETTEECTTSCHHHH
T ss_pred CcEEEEEEEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCC----CHHHHcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 4456778885333344455544 2 28999999887 3555567 99999999999999998889999
Q ss_pred HHHHHcCCCeEEEEEEeCCC
Q psy9827 264 RKLIDSSKEKLSLTIRREVP 283 (627)
Q Consensus 264 ~~~l~~~~~~v~l~V~r~~~ 283 (627)
..+++..+..+.|+|.|++.
T Consensus 86 ~~~l~~~g~~v~l~v~R~~~ 105 (108)
T 2jre_A 86 VEVLRNAGNPVRLLLIRRLP 105 (108)
T ss_dssp HHHHHHHCSEEEEEEEECCC
T ss_pred HHHHHcCCCeEEEEEEeCCc
Confidence 99999888899999999764
No 272
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.74 E-value=1.9e-08 Score=87.13 Aligned_cols=84 Identities=19% Similarity=0.340 Sum_probs=68.9
Q ss_pred CccEEEEEeecCCCCCeeee-----eC-------CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHH
Q psy9827 197 PQTLRVQLSKSRKKDDFGII-----LG-------NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEA 263 (627)
Q Consensus 197 ~~~~~V~L~k~~~~~~~gi~-----~~-------~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~ 263 (627)
...+.|.|.+...+.||.+. ++ .|++|..|.++ ++|..+| |++||+|++|||+++.++++.++
T Consensus 8 ~~~~~v~l~k~~~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~----spA~~aG~L~~GD~I~~vng~~v~~~~~~~~ 83 (108)
T 1q7x_A 8 GDIFEVELAKNDNSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQ----GAAESDGRIHKGDRVLAVNGVSLEGATHKQA 83 (108)
T ss_dssp SSEEEEEEESSSCSCCEEESSSSSSBCBCTTSSSCCCBEEEECTT----STHHHHTCCCSSCEEEEETTEECBSCTTSHH
T ss_pred CcEEEEEEEECCCCccEEEEEeccCCCccccCCCCCEEEEEECCC----ChHHHCCCCCCCCEEEEECCEECCCCCHHHH
Confidence 45678888887666666665 21 58999999887 3455566 99999999999999999999999
Q ss_pred HHHHHcCCCeEEEEEEeCCCC
Q psy9827 264 RKLIDSSKEKLSLTIRREVPR 284 (627)
Q Consensus 264 ~~~l~~~~~~v~l~V~r~~~~ 284 (627)
..+++..+..+.|.|.|++..
T Consensus 84 ~~~~~~~g~~v~l~v~R~~~~ 104 (108)
T 1q7x_A 84 VETLRNTGQVVHLLLEKGQSP 104 (108)
T ss_dssp HHHHHHTTSEEEEEEECCCCS
T ss_pred HHHHHcCCCeEEEEEEeCCcc
Confidence 999999989999999997643
No 273
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=98.74 E-value=6.3e-08 Score=83.64 Aligned_cols=81 Identities=20% Similarity=0.351 Sum_probs=62.9
Q ss_pred cEEEEEeec-CCCCCeeeee-CCcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEE
Q psy9827 199 TLRVQLSKS-RKKDDFGIIL-GNKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLS 275 (627)
Q Consensus 199 ~~~V~L~k~-~~~~~~gi~~-~~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~ 275 (627)
.+.|.|.+. ..+.||.+.. ..|++|..|.+| ++|..+| |++||+|++|||+++.++++.++..+++..++.+.
T Consensus 3 ~~~v~L~k~~~~glG~~i~~~~~gv~V~~V~~g----spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~v~ 78 (106)
T 2la8_A 3 KFNVDLMKKAGKELGLSLSPNEIGCTIADLIQG----QYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVS 78 (106)
T ss_dssp EEEEEECCBSSSTTCCEEEECSSSEEEEECCTT----SCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSCBSCEE
T ss_pred EEEEEEEeCCCCccCEEEEeCCCCEEEEEECCC----CHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEE
Confidence 456777743 2333443333 358999999987 3444556 99999999999999999999999999999888999
Q ss_pred EEEEeCCC
Q psy9827 276 LTIRREVP 283 (627)
Q Consensus 276 l~V~r~~~ 283 (627)
|.|.|...
T Consensus 79 l~v~R~~~ 86 (106)
T 2la8_A 79 MEVTRPKP 86 (106)
T ss_dssp EEEEECCS
T ss_pred EEEEeCCC
Confidence 99999644
No 274
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=98.74 E-value=1.8e-08 Score=85.56 Aligned_cols=79 Identities=22% Similarity=0.257 Sum_probs=62.4
Q ss_pred cEEEEEeecC-CCCCeeeeeC--CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeE
Q psy9827 199 TLRVQLSKSR-KKDDFGIILG--NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKL 274 (627)
Q Consensus 199 ~~~V~L~k~~-~~~~~gi~~~--~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v 274 (627)
++.|.|.|.. ...++.+... .+++|.+|.++ ++|..+| |++||+|++|||+++.+++++++..+|+..++.+
T Consensus 13 ~~~v~l~K~~~~~lG~~l~~~~~~gv~V~~V~~g----spA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~v 88 (97)
T 2ejy_A 13 VRLIQFEKVTEEPMGICLKLNEKQSCTVARILHG----GMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKETKGMI 88 (97)
T ss_dssp CEEEEEEECSSSCCSEEEEECTTCCEEEEEECSS----SHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHCCEEE
T ss_pred cEEEEEEeCCCCCeeEEEEeCCCCCEEEEEeCCC----CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 4567787754 2334444432 58999999887 3455566 9999999999999999989999999999888899
Q ss_pred EEEEEeC
Q psy9827 275 SLTIRRE 281 (627)
Q Consensus 275 ~l~V~r~ 281 (627)
+|+|.+.
T Consensus 89 ~L~V~~~ 95 (97)
T 2ejy_A 89 SLKVIPN 95 (97)
T ss_dssp EEEEECC
T ss_pred EEEEEEC
Confidence 9999874
No 275
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.74 E-value=2.9e-08 Score=88.32 Aligned_cols=82 Identities=23% Similarity=0.310 Sum_probs=67.1
Q ss_pred ccEEEEEeecCCCCCeeeeeC-----CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHcCC
Q psy9827 198 QTLRVQLSKSRKKDDFGIILG-----NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDSSK 271 (627)
Q Consensus 198 ~~~~V~L~k~~~~~~~gi~~~-----~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~ 271 (627)
..+.|.|.+...+.+|.+..+ .+++|..|.++ ++|..+| |++||+|++|||+++.++++.+++.+++..+
T Consensus 25 ~~~~v~l~k~~~glG~~l~~~~~~~~~gv~V~~V~~~----spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~ 100 (124)
T 2daz_A 25 ELHIIELEKDKNGLGLSLAGNKDRSRMSIFVVGINPE----GPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTAP 100 (124)
T ss_dssp EEEEEEEECCSSCCCEEEECBSSTTSCCEEEEEECTT----SHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHSC
T ss_pred ceEEEEEEeCCCccCEEEeccCCCCcCCEEEEEECCC----CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 456788888765556665554 48999999887 3445555 9999999999999999999999999999988
Q ss_pred CeEEEEEEeCCC
Q psy9827 272 EKLSLTIRREVP 283 (627)
Q Consensus 272 ~~v~l~V~r~~~ 283 (627)
..+.|+|.|+..
T Consensus 101 ~~v~l~v~R~~~ 112 (124)
T 2daz_A 101 SKVKLVFIRNED 112 (124)
T ss_dssp SEEEEEEEECTT
T ss_pred CeEEEEEEeCCC
Confidence 899999999754
No 276
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.74 E-value=1.4e-08 Score=86.67 Aligned_cols=83 Identities=18% Similarity=0.261 Sum_probs=67.4
Q ss_pred CccEEEEEeecCCCCCeeeeeCCcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEEE
Q psy9827 197 PQTLRVQLSKSRKKDDFGIILGNKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSL 276 (627)
Q Consensus 197 ~~~~~V~L~k~~~~~~~gi~~~~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~l 276 (627)
...+.+.+.+...+.+|.+....+++|..|.++ ++|..+||++||+|++|||+++.++++.++..+++..++.+.|
T Consensus 14 ~~~~~v~l~~~~~g~G~~~~~~~~~~V~~V~~~----spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l 89 (100)
T 1whd_A 14 GEKLQITIRRGKDGFGFTICCDSPVRVQAVDSG----GPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIIL 89 (100)
T ss_dssp CEEEEEEEECCSSSSSCBCCCSSSCBCCBCCTT----SHHHHHTCCSSCEEEEETTEECTTCCHHHHHHHHHHCSSEEEE
T ss_pred cceEEEEEECCCCeeeEEEeCCCCEEEEEECCC----CHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 355677787765554554444578999999876 4566678999999999999999999999999999988888999
Q ss_pred EEEeCCC
Q psy9827 277 TIRREVP 283 (627)
Q Consensus 277 ~V~r~~~ 283 (627)
+|.|+..
T Consensus 90 ~v~R~~~ 96 (100)
T 1whd_A 90 LVWRVSG 96 (100)
T ss_dssp EEEECCS
T ss_pred EEEECCC
Confidence 9999754
No 277
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.74 E-value=5.5e-08 Score=84.49 Aligned_cols=86 Identities=19% Similarity=0.275 Sum_probs=69.7
Q ss_pred CCCccEEEEEeecCCCCCeeeee----------CCcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHH
Q psy9827 195 PEPQTLRVQLSKSRKKDDFGIIL----------GNKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEAR 264 (627)
Q Consensus 195 ~~~~~~~V~L~k~~~~~~~gi~~----------~~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~ 264 (627)
.....+.+.+.+...+.||.+.. ..+++|..|.++ ++|..++|++||+|++|||+++.++++.++.
T Consensus 12 ~~~~~~~~~l~~~~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~----spA~~aGL~~GD~I~~ing~~v~~~~~~~~~ 87 (110)
T 1x5q_A 12 IEEEELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEE----GPAARAGVRVGDKLLEVNGVALQGAEHHEAV 87 (110)
T ss_dssp CCCEEEEEEEECSSSSCSEEEEECTTSCCSSTTCCSEEEEEECTT----SHHHHHTCCTTCEEEEETTEECTTCCHHHHH
T ss_pred CCcceEEEEEecCCCeeeEEEEccccCCccccCCCCEEEEEECCC----CHHHHcCCCCCCEEEEECCEECCCcCHHHHH
Confidence 34456778888876666666653 258999999886 4566678999999999999999998899999
Q ss_pred HHHHcCCCeEEEEEEeCCCC
Q psy9827 265 KLIDSSKEKLSLTIRREVPR 284 (627)
Q Consensus 265 ~~l~~~~~~v~l~V~r~~~~ 284 (627)
..++..+..+.|+|.|++..
T Consensus 88 ~~~~~~g~~v~l~v~R~g~~ 107 (110)
T 1x5q_A 88 EALRGAGTAVQMRVWRESGP 107 (110)
T ss_dssp HHHHSCCSEEEEEEEECSSC
T ss_pred HHhhCCCCeEEEEEEECCcc
Confidence 98888889999999997653
No 278
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=98.73 E-value=4.4e-08 Score=87.77 Aligned_cols=86 Identities=20% Similarity=0.334 Sum_probs=68.1
Q ss_pred CCccEEEEEeecCCCCCeeeeeC----CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHcC
Q psy9827 196 EPQTLRVQLSKSRKKDDFGIILG----NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDSS 270 (627)
Q Consensus 196 ~~~~~~V~L~k~~~~~~~gi~~~----~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~ 270 (627)
....+.|.|.++..+.||.+..+ .+++|..|.++ ++|..+| |++||+|++|||+++.+++++++..+|+..
T Consensus 16 ~g~~~~v~l~~~~~g~G~~i~g~~~~~~~v~V~~V~~~----spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~ 91 (129)
T 2kpk_A 16 KGKFIHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLD----GPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSI 91 (129)
T ss_dssp CSEEEEEEEEECSSCCSEEEEEEEETTEEEEEEEECTT----SHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHS
T ss_pred CCcEEEEEEEECCCcccEEEeCccCCCCCEEEEEECCC----ChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 33456788888766666655553 25999999887 3455556 999999999999999999999999999987
Q ss_pred --CCeEEEEEEeCCCCC
Q psy9827 271 --KEKLSLTIRREVPRP 285 (627)
Q Consensus 271 --~~~v~l~V~r~~~~~ 285 (627)
+..+.|+|.|+...+
T Consensus 92 ~~g~~v~l~v~R~~~~~ 108 (129)
T 2kpk_A 92 PIGASVDLELCRGYPLP 108 (129)
T ss_dssp CTTEEEEEEEEECSCCS
T ss_pred CCCCeEEEEEEeCCCCC
Confidence 568999999976543
No 279
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=98.73 E-value=2.5e-08 Score=86.00 Aligned_cols=80 Identities=18% Similarity=0.241 Sum_probs=65.8
Q ss_pred EEEEEeecC-CCCCeeeeeC---CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEE
Q psy9827 200 LRVQLSKSR-KKDDFGIILG---NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLS 275 (627)
Q Consensus 200 ~~V~L~k~~-~~~~~gi~~~---~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~ 275 (627)
..|.|.+.. ...+|++... .|++|..|.++ ++|..+||++||+|++|||+++.++++.++..+++..+..++
T Consensus 3 r~v~l~~~~~~~~G~~l~~~~~~~g~~V~~V~~~----spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~ 78 (106)
T 3ngh_A 3 RESKLSKQEGQNYGFFLRIEKDTDGHLIRVIEEG----SPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVT 78 (106)
T ss_dssp EEEEEECCTTCCCCCEEECCTTCCSCEEECCCTT----SHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHHHTTTEEE
T ss_pred EEEEEEeCCCCeeCEEEEEEeCCCCEEEEEeCCC----CHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEE
Confidence 456777764 4556666654 47999999886 466678899999999999999999999999999998889999
Q ss_pred EEEEeCCC
Q psy9827 276 LTIRREVP 283 (627)
Q Consensus 276 l~V~r~~~ 283 (627)
|+|.|++.
T Consensus 79 l~v~r~~~ 86 (106)
T 3ngh_A 79 LLVLDGDS 86 (106)
T ss_dssp EEEECHHH
T ss_pred EEEEECCe
Confidence 99998653
No 280
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum}
Probab=98.72 E-value=1.5e-07 Score=92.15 Aligned_cols=149 Identities=19% Similarity=0.177 Sum_probs=103.2
Q ss_pred CCceEEEeCcc---HHHHHHHHhhhCCCCccc--------CCC-------CCCCCHHHHHHHHhcccc-----cCCcee-
Q psy9827 453 FIRPVVLFGPV---ADLARDKLLKDFPDKFSA--------PRK-------FNFILWATIKDTAMYQSS-----KEPGMY- 508 (627)
Q Consensus 453 ~~RpvVl~Gp~---k~~l~~~Ll~~~p~~f~~--------~~~-------~~Fvs~e~f~~~i~~~~~-----~~~~~Y- 508 (627)
..+.++|+||+ |+||.+.|...+|..+.. +.+ ..|.+.+.|..++..+++ +.+|+|
T Consensus 22 ~G~~~~lvGpsGsGKSTLl~~L~g~~pG~i~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g 101 (218)
T 1z6g_A 22 NIYPLVICGPSGVGKGTLIKKLLNEFPNYFYFSVSCTTRKKREKEKEGVDYYFIDKTIFEDKLKNEDFLEYDNYANNFYG 101 (218)
T ss_dssp CCCCEEEECSTTSSHHHHHHHHHHHSTTTEEECCCEECSCCCSSCCBTTTBEECCHHHHHHHHHTTCEEEEEEETTEEEE
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhhCCCcEEEeecccCCCCCcccccCCeEEECCHHHHHHhhhccchhhhhhcccccCC
Confidence 46789999999 999999998877723321 111 147788889887643322 246677
Q ss_pred ----hHHhHHhCCCcEEEecC--CceeccccC--CCCceeEEEEcCCCcccC-------CCCCHHHHHHHHHHHHHHHHH
Q psy9827 509 ----QGKDSMYQGKDSMYQGK--ESMYQGKDS--MYQGKDSMYQGKDSMYQG-------KDIKKEVKIKLFEQSQKLEKV 573 (627)
Q Consensus 509 ----~V~~v~~~gk~ciLdi~--~~l~~~~~~--~~P~~~vIFI~ppsl~~~-------~~~~e~~~~~~~~~~~~~e~~ 573 (627)
.++++++.++.|+++++ +....|..- ..|. .+|+.+|++..+ .+.+++.+.+.+.++.+ +..
T Consensus 102 ~~~~~i~~~l~~~~~~il~~~lsggq~qR~~i~~~~~~--~~ll~~~~~~~Lde~~~~~d~~~~~~i~~~l~~~~~-~~~ 178 (218)
T 1z6g_A 102 TLKSEYDKAKEQNKICLFEMNINGVKQLKKSTHIKNAL--YIFIKPPSTDVLLSRLLTRNTENQEQIQKRMEQLNI-ELH 178 (218)
T ss_dssp EEHHHHHHHHHTTCEEEEEECHHHHHHHTTCSSCCSCE--EEEEECSCHHHHHHHHHHTCCCCHHHHHHHHHHHHH-HHH
T ss_pred CcHHHHHHHHhCCCcEEEEecHHHHHHHHHHhcCCCcE--EEEEeCcCHHHHHHHHHhcCCCCHHHHHHHHHHHHH-HHH
Confidence 78999999999999998 222111111 2357 899999995433 34456656666655533 323
Q ss_pred hc--CcccEEEECCCHHHHHHHHHHHHHhhCCC
Q psy9827 574 WS--HVFTGTITLSGVDVWYRKTRELIEKQQSS 604 (627)
Q Consensus 574 ~~--~~fd~vi~n~~l~~~~~~l~~~i~~~~~~ 604 (627)
+. ..||.||+|+|+++++..+..+|..+..+
T Consensus 179 ~~h~~~~d~iiv~~~~~ea~~~~~~ii~~~~~~ 211 (218)
T 1z6g_A 179 EANLLNFNLSIINDDLTLTYQQLKNYLLNSYIH 211 (218)
T ss_dssp HHTTSCCSEEEECSSHHHHHHHHHHHHHHHTTC
T ss_pred hhcccCCCEEEECCCHHHHHHHHHHHHHHHHHh
Confidence 55 67999999999999999999999876543
No 281
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.71 E-value=5.1e-08 Score=85.20 Aligned_cols=83 Identities=18% Similarity=0.256 Sum_probs=66.2
Q ss_pred ccEEEEEeecCC-CCCeeeeeC-CcEEEEEeccCCCCCCCCCCCCC-CCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeE
Q psy9827 198 QTLRVQLSKSRK-KDDFGIILG-NKIFVKEVTHRLDNNASPGTHQL-AEGDVLLKINNHPTDGMSVKEARKLIDSSKEKL 274 (627)
Q Consensus 198 ~~~~V~L~k~~~-~~~~gi~~~-~gi~V~~V~~g~~~~~~a~~~~L-~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v 274 (627)
....|.|.|... +.||.+... .+++|..|.++ ++|..+|| ++||+|++|||+++.+++++++..+|+..++.+
T Consensus 25 ~~~~v~l~k~~~~~lG~~i~~~~~gv~V~~V~~~----spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v 100 (113)
T 1va8_A 25 TVKIVRIEKARDIPLGATVRNEMDSVIISRIVKG----GAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTL 100 (113)
T ss_dssp ECEEEEEEECTTCCCCEEEEECSSSEEEEEECTT----SHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCEEE
T ss_pred ceEEEEEEeCCCCceeEEEEeCCCCEEEEEeCCC----CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 345688888754 444444443 68999999887 35555667 999999999999999999999999999888899
Q ss_pred EEEEEeCCCC
Q psy9827 275 SLTIRREVPR 284 (627)
Q Consensus 275 ~l~V~r~~~~ 284 (627)
+|+|.|....
T Consensus 101 ~l~v~r~~~~ 110 (113)
T 1va8_A 101 TFVLIPSSGP 110 (113)
T ss_dssp EEEEECCCCC
T ss_pred EEEEEECCcc
Confidence 9999987653
No 282
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=98.71 E-value=5.6e-08 Score=81.32 Aligned_cols=80 Identities=24% Similarity=0.344 Sum_probs=63.4
Q ss_pred EEEEEeecCCCCCeeeeeC----CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEE
Q psy9827 200 LRVQLSKSRKKDDFGIILG----NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLS 275 (627)
Q Consensus 200 ~~V~L~k~~~~~~~gi~~~----~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~ 275 (627)
+.|.+.. ..+.||.+..+ .+++|..|.++ ++|..+||++||+|++|||+++.++++.++..+++..+..+.
T Consensus 5 ~~v~~~~-~~~~G~~l~~~~~~~~g~~V~~V~~~----spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~ 79 (91)
T 2pkt_A 5 QQIDLQG-PGPWGFRLVGGKDFEQPLAISRVTPG----SKAALANLCIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLT 79 (91)
T ss_dssp EEEEEES-SSCCSEEEEEEGGGTEEEEEEEECTT----SHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEE
T ss_pred EEEEECC-CCCCCEEEEccCCCCCCeEEEEECCC----CHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 3444543 34455555544 48999999886 466677899999999999999999999999999999888999
Q ss_pred EEEEeCCCC
Q psy9827 276 LTIRREVPR 284 (627)
Q Consensus 276 l~V~r~~~~ 284 (627)
|.|.|++..
T Consensus 80 l~v~R~g~~ 88 (91)
T 2pkt_A 80 LTVARSEHE 88 (91)
T ss_dssp EEEEEECCC
T ss_pred EEEEECCcc
Confidence 999997653
No 283
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.71 E-value=3.5e-08 Score=84.81 Aligned_cols=85 Identities=19% Similarity=0.237 Sum_probs=64.2
Q ss_pred ccEEEEEeecCCCCCeeeeeCC----c-EEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHc---
Q psy9827 198 QTLRVQLSKSRKKDDFGIILGN----K-IFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDS--- 269 (627)
Q Consensus 198 ~~~~V~L~k~~~~~~~gi~~~~----g-i~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~--- 269 (627)
....|.|.+...+.+|.+..+. + ++|..|.+++ +|++.+.|++||+|++|||+++.++++++++.+|+.
T Consensus 6 ~~~~v~l~k~~~glG~~i~gg~~~~~~~~~I~~v~~~s---~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 82 (103)
T 1ufx_A 6 SGTLVRVKKSAATLGIAIEGGANTRQPLPRIVTIQRGG---SAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFK 82 (103)
T ss_dssp SSEEEEEECCSSSCCEEEECBTTSSCSSCEEEEECTTS---HHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHH
T ss_pred ceEEEEEEcCCCcCCeEEECCCCCCCCcEEEEEeCCCC---hHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcc
Confidence 3456777766555555555442 3 4999998872 333334499999999999999999999999999997
Q ss_pred --CCCeEEEEEEeCCCCC
Q psy9827 270 --SKEKLSLTIRREVPRP 285 (627)
Q Consensus 270 --~~~~v~l~V~r~~~~~ 285 (627)
.++.+.|.|.|....+
T Consensus 83 ~~~~~~i~l~v~r~~~~~ 100 (103)
T 1ufx_A 83 TKDRDYIDFLVTEFNSGP 100 (103)
T ss_dssp CSSCSEEEEEECCCCCCT
T ss_pred cCCCCeEEEEEEEcccCC
Confidence 4678999999976543
No 284
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.71 E-value=1.5e-08 Score=87.39 Aligned_cols=84 Identities=13% Similarity=0.178 Sum_probs=67.9
Q ss_pred CCccEEEEEeecCCCCCeeeeeC---CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCC
Q psy9827 196 EPQTLRVQLSKSRKKDDFGIILG---NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKE 272 (627)
Q Consensus 196 ~~~~~~V~L~k~~~~~~~gi~~~---~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~ 272 (627)
.+.+..|.|.|...+.+|.+... .|++|..|.++ ++|..+||++||+|++|||+++.++++.++..+++..++
T Consensus 6 ~~~~r~v~l~k~~~~~G~~l~~~~~~~g~~V~~V~~~----spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~ 81 (106)
T 2eei_A 6 SGQPRLCYLVKEGGSYGFSLKTVQGKKGVYMTDITPQ----GVAMRAGVLADDHLIEVNGENVEDASHEEVVEKVKKSGS 81 (106)
T ss_dssp CSSSEEEEEECCSSSCSCCEECCSSCCSCEECCCCTT----SHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHHHCS
T ss_pred CCCCEEEEEEECCCCCCEEEEeccCCCCEEEEEECCC----CHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 45677888998655555555332 58999999876 455667799999999999999999999999999988888
Q ss_pred eEEEEEEeCCC
Q psy9827 273 KLSLTIRREVP 283 (627)
Q Consensus 273 ~v~l~V~r~~~ 283 (627)
.+.|.|.|...
T Consensus 82 ~v~l~v~r~~~ 92 (106)
T 2eei_A 82 RVMFLLVDKET 92 (106)
T ss_dssp EEEEEECCTTT
T ss_pred eEEEEEEcCch
Confidence 99999988654
No 285
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.70 E-value=4.9e-08 Score=94.21 Aligned_cols=73 Identities=29% Similarity=0.601 Sum_probs=65.8
Q ss_pred CceeEEEEccC------CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEeCCc
Q psy9827 60 GSVGIRLTGGN------KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQNRRD 132 (627)
Q Consensus 60 g~lG~~i~g~~------~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r~~~ 132 (627)
.+|||.+.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++..+++..+..+.|+|.|+..
T Consensus 117 ~~lG~~l~~g~~~~~~~~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~ 196 (200)
T 2qt5_A 117 NTFGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQEATLLIEYDVS 196 (200)
T ss_dssp TBCSEEEEEECCSSTTTCEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEEEEEEEEEE
T ss_pred CCeEEEEECCCCCCccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCc
Confidence 47999998763 3589999999999999999 9999999999999999999999999998888999999998654
No 286
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.70 E-value=1.4e-08 Score=87.08 Aligned_cols=86 Identities=22% Similarity=0.331 Sum_probs=68.2
Q ss_pred CCccEEEEEeecCCCCCeeeeeCC----cEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHcC
Q psy9827 196 EPQTLRVQLSKSRKKDDFGIILGN----KIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDSS 270 (627)
Q Consensus 196 ~~~~~~V~L~k~~~~~~~gi~~~~----gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~ 270 (627)
....+.+.+.+...+.||.+..+. +++|..|.++ ++|..+| |++||+|++|||+++.++++.++..+++..
T Consensus 9 ~~~~~~v~l~~~~~g~G~~~~~~~~~~~~~~V~~V~~~----spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 84 (103)
T 1wfv_A 9 DFDYFTVDMEKGAKGFGFSIRGGREYKMDLYVLRLAED----GPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSG 84 (103)
T ss_dssp CSCCEECCEECCTTSSSBCCEEETTTTEEEECCCBCTT----SHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHH
T ss_pred CceEEEEEEecCCCcCCEEEeccccCCCCEEEEEECCC----ChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 345567777776555555555432 8999999887 3555667 999999999999999999999999999988
Q ss_pred CCeEEEEEEeCCCCC
Q psy9827 271 KEKLSLTIRREVPRP 285 (627)
Q Consensus 271 ~~~v~l~V~r~~~~~ 285 (627)
+..+.|+|.|++...
T Consensus 85 g~~v~l~v~R~~~~~ 99 (103)
T 1wfv_A 85 GRRVRLLLKRGTGSG 99 (103)
T ss_dssp CSEECEEEECTTCSS
T ss_pred CCeEEEEEEECCCCC
Confidence 889999999977654
No 287
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.70 E-value=6.8e-08 Score=84.00 Aligned_cols=85 Identities=27% Similarity=0.357 Sum_probs=67.1
Q ss_pred CCccEEEEEeecCCCCCeeeeeC-------CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHH
Q psy9827 196 EPQTLRVQLSKSRKKDDFGIILG-------NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLI 267 (627)
Q Consensus 196 ~~~~~~V~L~k~~~~~~~gi~~~-------~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l 267 (627)
....+.+.+.+...+.||.+... .+++|..|.++ ++|..+| |++||+|++|||+++.+++++++..++
T Consensus 9 ~~~~~~~~l~~~~~glG~~~~~~~~~~~~~~g~~V~~V~~~----spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l 84 (111)
T 2koj_A 9 VGKRLNIQLKKGTEGLGFSITSRDVTIGGSAPIYVKNILPR----GAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLL 84 (111)
T ss_dssp SCEEEEEEEECBTTBTCEEEEECSCSSSSSSCEEEEEECSS----SHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred cCcEEEEEEEECCCccCEEEEeccCCCCCCcCEEEEEECCC----ChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 34556777777655555555543 47999999887 3555566 999999999999999988999999999
Q ss_pred HcC--CCeEEEEEEeCCCC
Q psy9827 268 DSS--KEKLSLTIRREVPR 284 (627)
Q Consensus 268 ~~~--~~~v~l~V~r~~~~ 284 (627)
+.. +..+.|.|.|++..
T Consensus 85 ~~~~~g~~v~l~v~R~~~~ 103 (111)
T 2koj_A 85 RSTKMEGTVSLLVFRQEEA 103 (111)
T ss_dssp HHCCCSSEEEEEEEECCCC
T ss_pred HhCCCCCeEEEEEEeCCCC
Confidence 975 67999999997654
No 288
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.69 E-value=2.7e-08 Score=87.45 Aligned_cols=82 Identities=23% Similarity=0.304 Sum_probs=66.0
Q ss_pred ccEEEEEeecC-CCCCeeeeeC-------CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCC-CCCHHHHHHHH
Q psy9827 198 QTLRVQLSKSR-KKDDFGIILG-------NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTD-GMSVKEARKLI 267 (627)
Q Consensus 198 ~~~~V~L~k~~-~~~~~gi~~~-------~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~-~~s~~e~~~~l 267 (627)
....|.|.|.. .+.||.+..+ .|++|..|.++ ++|..+| |++||+|++|||+++. +++++++..++
T Consensus 20 ~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~gv~V~~V~~~----spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l 95 (117)
T 2o2t_A 20 HVEVFELLKPPSGGLGFSVVGLRSENRGELGIFVQEIQEG----SVAHRDGRLKETDQILAINGQALDQTITHQQAISIL 95 (117)
T ss_dssp CEEEEEEECCSSSCSSCCEEEEECCC--CEEEEECCCCTT----SHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHH
T ss_pred eEEEEEEEECCCCCCCEEEeecccCCCCCCCEEEEEECCC----CHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHH
Confidence 45667777753 4455555543 37999999887 3555566 9999999999999998 99999999999
Q ss_pred HcCCCeEEEEEEeCCC
Q psy9827 268 DSSKEKLSLTIRREVP 283 (627)
Q Consensus 268 ~~~~~~v~l~V~r~~~ 283 (627)
+..++.+.|+|.|++.
T Consensus 96 ~~~~~~v~l~v~R~~~ 111 (117)
T 2o2t_A 96 QKAKDTVQLVIARGSL 111 (117)
T ss_dssp HHCCSEEEEEEESSCC
T ss_pred HcCCCEEEEEEEeCCc
Confidence 9988999999999764
No 289
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=98.69 E-value=4.2e-08 Score=88.14 Aligned_cols=60 Identities=27% Similarity=0.381 Sum_probs=52.7
Q ss_pred cEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHcCC--CeEEEEEEeCCC
Q psy9827 220 KIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDSSK--EKLSLTIRREVP 283 (627)
Q Consensus 220 gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~--~~v~l~V~r~~~ 283 (627)
+++|..|.++ ++|..+| |++||+|++|||+++.+++++++..+|+.+. ..+.|+|.|++.
T Consensus 66 gv~V~~V~~g----spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g~ 128 (131)
T 1wfg_A 66 CAFITKVKKG----SLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRSGP 128 (131)
T ss_dssp EEEEEEECTT----SHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEEEEEECS
T ss_pred CEEEEEECCC----ChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEcCCC
Confidence 8999999887 3455566 9999999999999999999999999999864 799999999754
No 290
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=98.69 E-value=3.9e-08 Score=87.98 Aligned_cols=83 Identities=28% Similarity=0.400 Sum_probs=65.0
Q ss_pred ccEEEEEeecC-CCCCeeeeeC-------CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCC-CCCHHHHHHHH
Q psy9827 198 QTLRVQLSKSR-KKDDFGIILG-------NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTD-GMSVKEARKLI 267 (627)
Q Consensus 198 ~~~~V~L~k~~-~~~~~gi~~~-------~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~-~~s~~e~~~~l 267 (627)
....|.|.|.. .+.||.+..+ .|++|..|.++ ++|..+| |++||+|++|||+++. ++++++++.+|
T Consensus 25 ~~~~v~l~k~~~~~lG~~i~g~~~~~~~~~gv~V~~V~~~----spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l 100 (128)
T 2db5_A 25 QIEYIDIERPSTGGLGFSVVALRSQNLGKVDIFVKDVQPG----SVADRDQRLKENDQILAINHTPLDQNISHQQAIALL 100 (128)
T ss_dssp EEEEEEEECCSSSCCCCEEEEEECSSSSCEEEEEECCCTT----SHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHH
T ss_pred ceEEEEEEECCCCccCEEEecccCCCCCCCCEEEEEECCC----CHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHH
Confidence 34567777764 3445554432 27999999887 3445556 9999999999999997 99999999999
Q ss_pred HcCCCeEEEEEEeCCCC
Q psy9827 268 DSSKEKLSLTIRREVPR 284 (627)
Q Consensus 268 ~~~~~~v~l~V~r~~~~ 284 (627)
+..+..+.|+|.|+...
T Consensus 101 ~~~~~~v~l~v~r~~~~ 117 (128)
T 2db5_A 101 QQTTGSLRLIVAREPVH 117 (128)
T ss_dssp HHCCSEEEEEEEECCCS
T ss_pred HcCCCeEEEEEEcCCCC
Confidence 99889999999997543
No 291
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=98.69 E-value=4.4e-08 Score=84.58 Aligned_cols=73 Identities=23% Similarity=0.343 Sum_probs=60.4
Q ss_pred cCCCCCeeeeeC---------CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEEE
Q psy9827 207 SRKKDDFGIILG---------NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSL 276 (627)
Q Consensus 207 ~~~~~~~gi~~~---------~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~l 276 (627)
...++||.+.+| .|++|..|.++ ++|..+| |++||+|++|||+++.++++.++..+++..++.+.|
T Consensus 11 ~~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~g----spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l 86 (106)
T 4amh_A 11 GSKGLGFSIAGGVGNQHWPGDNSIYVTKIIEG----GAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTSDFVYL 86 (106)
T ss_dssp -CCCSCEEEEECTTSCSBTTBCCEEEEEECTT----SHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCCSEEEE
T ss_pred CCCccCEEEEeccCCccccCCCCEEEEEECCC----CHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEE
Confidence 345566666654 27999999987 3455566 999999999999999999999999999999999999
Q ss_pred EEEeCCC
Q psy9827 277 TIRREVP 283 (627)
Q Consensus 277 ~V~r~~~ 283 (627)
+|.|++.
T Consensus 87 ~v~R~~~ 93 (106)
T 4amh_A 87 KVAKPGS 93 (106)
T ss_dssp EEECCSS
T ss_pred EEEeCCC
Confidence 9999764
No 292
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.69 E-value=5e-08 Score=82.19 Aligned_cols=81 Identities=21% Similarity=0.300 Sum_probs=64.2
Q ss_pred ccEEEEEeecCCCCCeeeeeC----CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCe
Q psy9827 198 QTLRVQLSKSRKKDDFGIILG----NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEK 273 (627)
Q Consensus 198 ~~~~V~L~k~~~~~~~gi~~~----~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~ 273 (627)
.++.|+|. +..+++|.+..+ .+++|..|.++ ++|..++|++||+|++|||+++.++++.++..+++..+..
T Consensus 8 ~~~~v~l~-~~~~~G~~l~gg~~~~~~v~V~~V~~~----spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~ 82 (94)
T 2eeg_A 8 MPHSVTLR-GPSPWGFRLVGGRDFSAPLTISRVHAG----SKAALAALCPGDLIQAINGESTELMTHLEAQNRIKGCHDH 82 (94)
T ss_dssp CCEEEEEC-CSSCCSCCEECCTTTTSCCEECCCCSS----SHHHHTTCCTTCEEEEETTEETTTCCHHHHHHHHHTCCSC
T ss_pred ceEEEEEe-CCCccCEEEECccCCCCCEEEEEECCC----CHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 45667773 334555555543 47999999876 4566678999999999999999998899999999988889
Q ss_pred EEEEEEeCCC
Q psy9827 274 LSLTIRREVP 283 (627)
Q Consensus 274 v~l~V~r~~~ 283 (627)
+.|+|.|++.
T Consensus 83 v~l~v~R~g~ 92 (94)
T 2eeg_A 83 LTLSVSSGPS 92 (94)
T ss_dssp EEEEEECCSS
T ss_pred EEEEEEeCCC
Confidence 9999998654
No 293
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.69 E-value=4.6e-08 Score=79.67 Aligned_cols=74 Identities=42% Similarity=0.727 Sum_probs=59.7
Q ss_pred EeecCCCCCeeeeeCCcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEEEEEEeC
Q psy9827 204 LSKSRKKDDFGIILGNKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRRE 281 (627)
Q Consensus 204 L~k~~~~~~~gi~~~~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~l~V~r~ 281 (627)
.........||+....|++|..|.++ ++|..++ |++||+|++|||+++.++++.++..+++...+.+.|.|.|+
T Consensus 6 ~~~~~~~~~~g~~~~~gv~V~~v~~~----s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 80 (81)
T 2rcz_A 6 LVKSRKNEEYGLRLASHIFVKEISQD----SLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQRD 80 (81)
T ss_dssp EECCSTTCCCCEEEEEEEEEEEECTT----SHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEEEEEC-
T ss_pred EEECCCCCCCCEEEeCCEEEEEECCC----ChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCeEEEEEEeC
Confidence 33333455677766678999999887 3455567 99999999999999999999999999998777999999875
No 294
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.68 E-value=1.1e-07 Score=81.48 Aligned_cols=80 Identities=28% Similarity=0.387 Sum_probs=64.6
Q ss_pred CccEEEEEeecCCCCCeeeeeC------------CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHH
Q psy9827 197 PQTLRVQLSKSRKKDDFGIILG------------NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEAR 264 (627)
Q Consensus 197 ~~~~~V~L~k~~~~~~~gi~~~------------~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~ 264 (627)
...+.|.+.+.. +.+|.+..+ .|++|..|.++ ++|.. +|++||+|++|||+++.++++.++.
T Consensus 10 ~~~~~v~l~~~~-~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~----spA~~-gL~~GD~I~~vng~~v~~~~~~~~~ 83 (103)
T 1n7t_A 10 KQEIRVRVEKDP-ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPE----GPASK-LLQPGDKIIQANGYSFINIEHGQAV 83 (103)
T ss_dssp CCCEEEEEECSS-CCCBEEEECTTSSBCSSCSSCCSEECCCBSSS----STTSS-SCCTTCEEEEETTEECSSCCHHHHH
T ss_pred cEEEEEEEccCC-CccEEEEcccCCCCCccccCCCCEEEEEECCC----CchHH-CCCCCCEEEEECCEECCCCCHHHHH
Confidence 345677777754 556666552 38999999887 34445 9999999999999999999999999
Q ss_pred HHHHcCCCeEEEEEEeCC
Q psy9827 265 KLIDSSKEKLSLTIRREV 282 (627)
Q Consensus 265 ~~l~~~~~~v~l~V~r~~ 282 (627)
..++..+..+.|+|.|+.
T Consensus 84 ~~~~~~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 84 SLLKTFQNTVELIIVREV 101 (103)
T ss_dssp HHHHHCCSEEEEEEECCC
T ss_pred HHhhcCCCeEEEEEEecC
Confidence 999988899999999863
No 295
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=98.68 E-value=7.1e-08 Score=81.62 Aligned_cols=81 Identities=19% Similarity=0.286 Sum_probs=65.3
Q ss_pred cEEEEEeecCCCCCeeeee----------CCcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHH
Q psy9827 199 TLRVQLSKSRKKDDFGIIL----------GNKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLID 268 (627)
Q Consensus 199 ~~~V~L~k~~~~~~~gi~~----------~~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~ 268 (627)
.+.+.+.+...+.||.+.. ..+++|..|.++ ++|..+||++||+|++|||+++.+++..++...++
T Consensus 4 ~~~v~~~~~~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~----spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~ 79 (97)
T 2w4f_A 4 ELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEE----GPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALR 79 (97)
T ss_dssp EEEEEEECBTTBSSEEEEECTTSCCSBTTBCSEEEEEECTT----SHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EEEEEEEeCCCceeEEEECCccCCcccCCCCCEEEEEECCC----ChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHh
Confidence 4567777765555555553 258999999887 45666789999999999999999988888888888
Q ss_pred cCCCeEEEEEEeCCC
Q psy9827 269 SSKEKLSLTIRREVP 283 (627)
Q Consensus 269 ~~~~~v~l~V~r~~~ 283 (627)
..+..+.|.|.|++.
T Consensus 80 ~~g~~v~l~v~R~g~ 94 (97)
T 2w4f_A 80 GAGTAVQMRVWRERE 94 (97)
T ss_dssp TSCSEEEEEEECCSS
T ss_pred CCCCeEEEEEEeCCc
Confidence 888899999999764
No 296
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=98.68 E-value=2.8e-08 Score=103.47 Aligned_cols=120 Identities=22% Similarity=0.355 Sum_probs=82.4
Q ss_pred ccccCC-CCCCCCCC-------CceeeeecccccCCCCCccccccCCCCceE------EE---------eccCCceeEEE
Q psy9827 10 TFQKEG-SVGIRLTG-------GNKVGIFVTAVQPGSPDLFSIFFVEPDPRF------IT---------FQKEGSVGIRL 66 (627)
Q Consensus 10 ~~~~~~-~~~~~~~~-------g~~iGin~~ai~~~~~d~~~~~~~~~~~r~------v~---------l~k~g~lG~~i 66 (627)
.+.+++ ++|.++|+ |++|||+ ++... .+++|++|.... +. -...+.+|+.+
T Consensus 160 ~~i~~d~~~~~G~SGGPl~~~~G~vVGI~-s~~~~-----~g~~~aip~~~i~~~l~~~~~~~~~~g~~~~~r~~lGv~~ 233 (325)
T 1lcy_A 160 EYIQTDAAIDFGNAGGPLVNLDGEVIGVN-TMKVT-----AGISFAIPSDRLREFLHRGEKKNSSSGISGSQRRYIGVMM 233 (325)
T ss_dssp CCEEESSCCSTTTTTSEEEETTSCEEEEE-EEEEE-----TTEEEEEEHHHHHHHTCC---------------EECCEEE
T ss_pred CEEEEcCCCCCCCccccEECCCCEEEEEE-eEeec-----CCeeEEEEHHHHHHHHHHhhhcccccccccccccccceEe
Confidence 344554 78888774 7788999 65442 245666663211 10 01224688887
Q ss_pred EccC-----------------CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEe
Q psy9827 67 TGGN-----------------KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQN 129 (627)
Q Consensus 67 ~g~~-----------------~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r 129 (627)
.... ..|++|..|.++|||+++||++||+|++|||..+.++.+ ....+.. ++.+.|++.|
T Consensus 234 ~~l~~~~~~~~~l~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GDvI~~ing~~v~~~~~--l~~~l~~-~~~v~l~v~R 310 (325)
T 1lcy_A 234 LTLSPSILAELQLREPSFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAED--VYEAVRT-QSQLAVQIRR 310 (325)
T ss_dssp EECCHHHHHHHTTSCTTSCCCSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHH--HHHHHTT-CSSEEEEEEE
T ss_pred ecCCHHHHHhhCccccccccCCCCeEEEEeCcCChHHHCCCCCCCEEEEECCEEcCCHHH--HHHHHhC-CCeEEEEEEE
Confidence 7531 258999999999999999999999999999999987644 3334443 6899999999
Q ss_pred CCcccceee
Q psy9827 130 RRDEYEHVV 138 (627)
Q Consensus 130 ~~~~~~~~v 138 (627)
++......+
T Consensus 311 ~g~~~~~~v 319 (325)
T 1lcy_A 311 GRETLTLYV 319 (325)
T ss_dssp TTEEEEEEE
T ss_pred CCEEEEEEE
Confidence 876554443
No 297
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.68 E-value=1.8e-07 Score=80.69 Aligned_cols=83 Identities=22% Similarity=0.210 Sum_probs=65.9
Q ss_pred CccEEEEEeecC-CCCCeeeeeC----------CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHH
Q psy9827 197 PQTLRVQLSKSR-KKDDFGIILG----------NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARK 265 (627)
Q Consensus 197 ~~~~~V~L~k~~-~~~~~gi~~~----------~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~ 265 (627)
...+.|.|.|.. .+.||.+..+ .+++|..|.++ ++|. ++|++||+|++|||+++.+++..++..
T Consensus 6 ~~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~----spA~-agl~~GD~I~~vng~~v~~~~~~~~~~ 80 (107)
T 2h2b_A 6 WEQHTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKG----GPAE-GQLQENDRVAMVNGVSMDNVEHAFAVQ 80 (107)
T ss_dssp EEEEEEEEECBTTTBTCEEEEECTTSCCTTTCCCCEEEEEECTT----STTB-TTBCTTCEEEEETTEECTTCCHHHHHH
T ss_pred ceeEEEEEEeCCCCccCEEEecCcCCCcccCCCCCEEEEEECCC----Cchh-hCCCCCCEEEEECCEECCCccHHHHHH
Confidence 356778888874 4455555532 28999999887 3455 899999999999999999988888888
Q ss_pred HHHcCCCeEEEEEEeCCCC
Q psy9827 266 LIDSSKEKLSLTIRREVPR 284 (627)
Q Consensus 266 ~l~~~~~~v~l~V~r~~~~ 284 (627)
.+...+..+.|.|.|++..
T Consensus 81 ~~~~~g~~v~l~v~R~~~~ 99 (107)
T 2h2b_A 81 QLRKSGKNAKITIRRKKGG 99 (107)
T ss_dssp HHHTCCSEEEEEEEEESCC
T ss_pred HhhCCCCEEEEEEEECCCC
Confidence 8888888999999997653
No 298
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=98.67 E-value=2.6e-08 Score=99.92 Aligned_cols=86 Identities=20% Similarity=0.227 Sum_probs=70.0
Q ss_pred CccEEEEEeecC-CCCCeeeeeC----CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCC
Q psy9827 197 PQTLRVQLSKSR-KKDDFGIILG----NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSK 271 (627)
Q Consensus 197 ~~~~~V~L~k~~-~~~~~gi~~~----~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~ 271 (627)
.....|.|.|.. .+.||.+.++ .|++|..|.+| ++|++.++|++||+|++|||+++.++++++++.+|+..+
T Consensus 76 ~~~r~V~L~k~~~~glGf~I~gg~d~~~gi~V~~V~~g---spA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~~~g 152 (263)
T 1z87_A 76 LQRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKG---LAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTG 152 (263)
T ss_dssp CSSEEECCCTTTTCCCCCEEEEETTTTEEEEEEECCTT---SHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHHHCC
T ss_pred CccEEEEEEeCCCCCEeEEEeeccCCCCCEEEEEECCC---CHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHhcCC
Confidence 356788888863 4556666554 38999999987 334444899999999999999999999999999999999
Q ss_pred CeEEEEEEeCCCCC
Q psy9827 272 EKLSLTIRREVPRP 285 (627)
Q Consensus 272 ~~v~l~V~r~~~~~ 285 (627)
+.++|+|.|.....
T Consensus 153 ~~V~L~V~R~~~~~ 166 (263)
T 1z87_A 153 KEVVLEVKYMKEVS 166 (263)
T ss_dssp SCCCEEEECCSSSS
T ss_pred CeEEEEEEeCcccc
Confidence 99999999976543
No 299
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.66 E-value=4.4e-08 Score=85.91 Aligned_cols=84 Identities=25% Similarity=0.356 Sum_probs=67.5
Q ss_pred ccEEEEEeecCCCCCeeeeeC-----CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHcCC
Q psy9827 198 QTLRVQLSKSRKKDDFGIILG-----NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDSSK 271 (627)
Q Consensus 198 ~~~~V~L~k~~~~~~~gi~~~-----~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~ 271 (627)
..+.|.|.+...+.+|.+..+ .+++|..|.++ ++|..+| |++||+|++|||+++.++++.++..+++..+
T Consensus 17 ~~~~v~l~~~~~glG~~l~~~~~~~~~gv~V~~V~~~----spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 92 (116)
T 2dm8_A 17 QEMIIEISKGRSGLGLSIVGGKDTPLNAIVIHEVYEE----GAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQTP 92 (116)
T ss_dssp SCEEEEEECCSSCCCCCCBCCTTSSCSSEECCCCCSS----SHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTCC
T ss_pred CEEEEEEEECCCcccEEEeCCCCCCcCCEEEEEECCC----ChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 346778877765555555543 38999999887 3555566 9999999999999999989999999999888
Q ss_pred CeEEEEEEeCCCCC
Q psy9827 272 EKLSLTIRREVPRP 285 (627)
Q Consensus 272 ~~v~l~V~r~~~~~ 285 (627)
..+.|+|.|++...
T Consensus 93 ~~v~l~v~R~~~~~ 106 (116)
T 2dm8_A 93 QKVRLVVYRDEAHY 106 (116)
T ss_dssp SEEEEEEECCSSCC
T ss_pred CeEEEEEEeCCccc
Confidence 99999999976543
No 300
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=98.66 E-value=9.7e-08 Score=82.78 Aligned_cols=61 Identities=13% Similarity=0.206 Sum_probs=53.7
Q ss_pred cEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEEEEEEeCCCC
Q psy9827 220 KIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 284 (627)
Q Consensus 220 gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~l~V~r~~~~ 284 (627)
|++|..|.++ ++|..+||++||+|++|||+++.+++++++..+++..+..+.|+|.|....
T Consensus 46 gv~V~~V~~~----spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~~~~~~ 106 (109)
T 1q3o_A 46 LQYLESVDEG----GVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRH 106 (109)
T ss_dssp SEEEEEECTT----SHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEEEEEEEECC
T ss_pred CEEEEEECCC----CHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEEEECCCC
Confidence 6899999886 456667899999999999999999999999999998888999999886543
No 301
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.66 E-value=4.1e-08 Score=81.53 Aligned_cols=73 Identities=16% Similarity=0.202 Sum_probs=55.2
Q ss_pred ceeEEEEccC--CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEeCCcc
Q psy9827 61 SVGIRLTGGN--KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQNRRDE 133 (627)
Q Consensus 61 ~lG~~i~g~~--~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r~~~~ 133 (627)
.+|+.....+ -.|+.|..+.|+|||+++||++||+|++|||.++.++.+..........++.+.|++.|++..
T Consensus 6 ~~~~~p~~~~g~~~G~~V~~~~~~s~A~~aGl~~GD~I~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R~g~~ 80 (87)
T 2i6v_A 6 YVRLSQVKRDDKVLGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERDGQQ 80 (87)
T ss_dssp TEEEEEEEETTEEEEEEEEECSCHHHHHHTTCCTTCEEEEETTEETTCHHHHHHHHHTGGGCSEEEEEEEETTEE
T ss_pred ccceEEEeeCCeEEEEEEEeCCCCCHHHHCCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 4555544322 247888999999999999999999999999999998866553332234678999999987654
No 302
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.65 E-value=8e-08 Score=81.92 Aligned_cols=83 Identities=25% Similarity=0.341 Sum_probs=64.9
Q ss_pred ccEEEEEeecCCC-CCeeeeeC----CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCC
Q psy9827 198 QTLRVQLSKSRKK-DDFGIILG----NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKE 272 (627)
Q Consensus 198 ~~~~V~L~k~~~~-~~~gi~~~----~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~ 272 (627)
....|.|.+...+ .||.+... .|++|..|.++ ++|..+||++||+|++|||+++.++++.++...++. +.
T Consensus 10 ~~~~v~l~~~~~~~lG~~~~~~~~~~~gv~V~~V~~~----spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~-~~ 84 (100)
T 2eeh_A 10 IIHSVRVEKSPAGRLGFSVRGGSEHGLGIFVSKVEEG----SSAERAGLCVGDKITEVNGLSLESTTMGSAVKVLTS-SS 84 (100)
T ss_dssp EECCEEECCCSSSSCSEEEECCTTTTCCEEEEEECTT----SHHHHHTCCSSCEEEEETTEECSSCCHHHHHHHHHS-CS
T ss_pred eEEEEEEEECCCCCccEEEEccccCCCCEEEEEECCC----CHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhcC-CC
Confidence 4456777765432 34444433 48999999886 456667899999999999999998889999999987 78
Q ss_pred eEEEEEEeCCCCC
Q psy9827 273 KLSLTIRREVPRP 285 (627)
Q Consensus 273 ~v~l~V~r~~~~~ 285 (627)
.+.|+|.|++..+
T Consensus 85 ~v~l~v~R~g~~p 97 (100)
T 2eeh_A 85 RLHMMVRRMGSGP 97 (100)
T ss_dssp SEEEEEEECSCCC
T ss_pred EEEEEEEECCcCC
Confidence 9999999987654
No 303
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.65 E-value=1.1e-07 Score=83.02 Aligned_cols=65 Identities=28% Similarity=0.470 Sum_probs=52.6
Q ss_pred CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEeCCcccceee
Q psy9827 71 KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQNRRDEYEHVV 138 (627)
Q Consensus 71 ~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r~~~~~~~~v 138 (627)
..|++|..|.++|||+++||++||+|++|||.++.++ .+....+.. ++.+.|++.|++......+
T Consensus 34 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~~-~~~v~l~v~R~g~~~~~~v 98 (113)
T 2pzd_A 34 QHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNA--EDVYEAVRT-QSQLAVQIRRGRETLTLYV 98 (113)
T ss_dssp SSCEEEEEEBTTSHHHHHTCCTTCEEEEETTEECCSH--HHHHHHHHH-CSSEEEEEEETTEEEEEEE
T ss_pred CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCH--HHHHHHHhC-CCeEEEEEEECCEEEEEEE
Confidence 3689999999999999999999999999999999865 334444444 6899999999776554443
No 304
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=98.65 E-value=1.3e-07 Score=79.91 Aligned_cols=82 Identities=20% Similarity=0.376 Sum_probs=65.2
Q ss_pred CCccEEEEEeecCCCCCeeeee---CCcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHcCC
Q psy9827 196 EPQTLRVQLSKSRKKDDFGIIL---GNKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDSSK 271 (627)
Q Consensus 196 ~~~~~~V~L~k~~~~~~~gi~~---~~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~ 271 (627)
....+.+.|.+.. ..++|+.. ..|++|..|.++ ++|..+| |++||+|++|||+++.++++.++..+++..+
T Consensus 6 ~~~~~~v~l~~~~-~~glG~~~~~~~~gv~V~~V~~~----spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~~ 80 (96)
T 2qkv_A 6 SLEKFNVDLMKKA-GKELGLSLSPNEIGCTIADLIQG----QYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKGAN 80 (96)
T ss_dssp CCCCEEEEEECBT-TBCCCEEEEECSSSEEEEEECTT----SCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCS
T ss_pred HCceEEEEEEeCC-CCCccEEEEeCCCcEEEEEeCCC----ChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCC
Confidence 3456778887642 23455543 368999999887 3555667 9999999999999999999999999999988
Q ss_pred CeEEEEEEeCC
Q psy9827 272 EKLSLTIRREV 282 (627)
Q Consensus 272 ~~v~l~V~r~~ 282 (627)
+.+.|+|.|..
T Consensus 81 ~~v~l~v~R~~ 91 (96)
T 2qkv_A 81 GKVSMEVTRPK 91 (96)
T ss_dssp SEEEEEEECCC
T ss_pred CcEEEEEEeCC
Confidence 99999999853
No 305
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=98.65 E-value=7.1e-08 Score=83.28 Aligned_cols=80 Identities=20% Similarity=0.274 Sum_probs=63.0
Q ss_pred ccEEEEEeecC-CCCCeeeeeC----CcEEEEEeccCCCCCCCCCCCC--CCCCCEEEEeCceeCCCCCHHHHHHHHHcC
Q psy9827 198 QTLRVQLSKSR-KKDDFGIILG----NKIFVKEVTHRLDNNASPGTHQ--LAEGDVLLKINNHPTDGMSVKEARKLIDSS 270 (627)
Q Consensus 198 ~~~~V~L~k~~-~~~~~gi~~~----~gi~V~~V~~g~~~~~~a~~~~--L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~ 270 (627)
....|.|.+.. .+.+|.+..+ .+++|..|.++ ++|..+| |++||+|++|||+++.++++.++..+++..
T Consensus 17 ~~~~v~l~~~~~~~~G~~~~gg~~~~~~~~V~~V~~~----spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~ 92 (107)
T 3nfk_A 17 NLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPG----TPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKAS 92 (107)
T ss_dssp CCEEEEECCCTTSCCCEEEEEEGGGTEEEEEEEECTT----SHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCG
T ss_pred CEEEEEEEcCCCCCCCEEEEccCCCCCCeEEEEECCC----CchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhc
Confidence 45667777764 4445555443 37999999887 4555666 999999999999999999999999999987
Q ss_pred CC----eEEEEEEeC
Q psy9827 271 KE----KLSLTIRRE 281 (627)
Q Consensus 271 ~~----~v~l~V~r~ 281 (627)
.. .+.|+|.|+
T Consensus 93 ~~~~~~~v~l~v~r~ 107 (107)
T 3nfk_A 93 CERHSGELMLLVRPN 107 (107)
T ss_dssp GGSBTTBEEEEEECC
T ss_pred cccCCcEEEEEEEcC
Confidence 64 899999874
No 306
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.65 E-value=6.3e-08 Score=82.18 Aligned_cols=81 Identities=15% Similarity=0.221 Sum_probs=62.7
Q ss_pred ccEEEEEeecCCCCCeeeeeCC---cEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCC-e
Q psy9827 198 QTLRVQLSKSRKKDDFGIILGN---KIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKE-K 273 (627)
Q Consensus 198 ~~~~V~L~k~~~~~~~gi~~~~---gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~-~ 273 (627)
.+..+.+.+...+.||.+..+. +++|..|.++ ++|..+||++||+|++|||+++.+++++++..+|+...+ .
T Consensus 9 ~~~~~~l~~~~~g~G~~~~~~~~~~g~~V~~V~~~----spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~ 84 (98)
T 2jxo_A 9 RPRLCTMKKGPSGYGFNLHSDKSKPGQFIRSVDPD----SPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDET 84 (98)
T ss_dssp CCEEEEEECTTTCCCEEEECCCSSSCEEEEEECTT----SHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEE
T ss_pred CcEEEEEEeCCCcccEEEEecCCCCCEEEEEECCC----CHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcE
Confidence 4566778776555455444443 8999999886 456667899999999999999998889999999998765 4
Q ss_pred EEEEEEeCC
Q psy9827 274 LSLTIRREV 282 (627)
Q Consensus 274 v~l~V~r~~ 282 (627)
+.|+|.|++
T Consensus 85 ~~l~v~R~g 93 (98)
T 2jxo_A 85 KLLVVDRET 93 (98)
T ss_dssp EEEECCHHH
T ss_pred EEEEEECCc
Confidence 558887753
No 307
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.64 E-value=1.3e-07 Score=83.74 Aligned_cols=83 Identities=28% Similarity=0.356 Sum_probs=65.0
Q ss_pred CCccEEEEEeecCCCCCeeeeeC-------CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHH
Q psy9827 196 EPQTLRVQLSKSRKKDDFGIILG-------NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLI 267 (627)
Q Consensus 196 ~~~~~~V~L~k~~~~~~~gi~~~-------~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l 267 (627)
....+.+.+.+...+.+|.+... .+++|..|.++ ++|..+| |++||+|++|||+++.+++++++..++
T Consensus 28 ~~~~~~v~l~~~~~~lG~~l~~~~~~~~g~~gv~V~~V~~g----spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l 103 (121)
T 2kom_A 28 IGKRLNIQLKKGTEGLGFSITSRDVTIGGSAPIYVKNILPR----GAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLL 103 (121)
T ss_dssp SCEEEEEEEECCTTCCCEEEECCCCSSSSSCCEEEEEECTT----SHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHH
T ss_pred CCeEEEEEEEcCCCcEeEEEEeccCCcCCCCCEEEEEECCC----ChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Confidence 34566777777655555554443 47999999887 3555566 999999999999999988899999999
Q ss_pred HcC--CCeEEEEEEeCC
Q psy9827 268 DSS--KEKLSLTIRREV 282 (627)
Q Consensus 268 ~~~--~~~v~l~V~r~~ 282 (627)
+.. +..+.|+|.|++
T Consensus 104 ~~~~~g~~v~l~v~R~g 120 (121)
T 2kom_A 104 RSTKMEGTVSLLVFRQE 120 (121)
T ss_dssp HHCCSSCEEEEEEEECC
T ss_pred hcCCCCCEEEEEEEeCC
Confidence 975 678999999864
No 308
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.64 E-value=1.3e-08 Score=90.75 Aligned_cols=62 Identities=26% Similarity=0.380 Sum_probs=54.5
Q ss_pred CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEEEEEEeCCCC
Q psy9827 219 NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 284 (627)
Q Consensus 219 ~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~l~V~r~~~~ 284 (627)
.+++|..|.++ ++|..++|++||+|++|||+++.+++++++..+|+..+..+.|+|.|....
T Consensus 61 ~gv~V~~V~~~----spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~~ 122 (126)
T 2yuy_A 61 DTIFVKQVKEG----GPAFEAGLCTGDRIIKVNGESVIGKTYSQVIALIQNSDTTLELSVMPKDSG 122 (126)
T ss_dssp CCCCBCCCCSS----SHHHHHTCCSSCCCCEETTEECSSCCHHHHHHHHHTCTTEEEEECCCCCCC
T ss_pred CCEEEEEECCC----ChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECCCC
Confidence 35899999876 455567799999999999999999999999999999888999999987654
No 309
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.63 E-value=5.5e-08 Score=85.50 Aligned_cols=81 Identities=17% Similarity=0.229 Sum_probs=65.5
Q ss_pred ccEEEEEeecC-CCCCeeeeeC----------CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHH
Q psy9827 198 QTLRVQLSKSR-KKDDFGIILG----------NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKL 266 (627)
Q Consensus 198 ~~~~V~L~k~~-~~~~~gi~~~----------~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~ 266 (627)
..+.|.|.+.. .+.||.+..+ .|++|..|.+++ +|. ++|++||+|++|||+++.++++.+++.+
T Consensus 14 ~~~~v~l~k~~~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~s----pA~-~gL~~GD~I~~Vng~~v~~~~~~~~~~~ 88 (117)
T 2csj_A 14 EQYTVTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGG----PAD-GLLQENDRVVMVNGTPMEDVLHSFAVQQ 88 (117)
T ss_dssp EEEEEEEECCSSSTTCEEEECCSSCCCCSSCCCBCEEEEECTTS----SHH-HHBCTTCEEEEESSCBCBTCCHHHHHHH
T ss_pred eEEEEEEEECCCCccCEEEeCCcCCccccCCCCCEEEEEECCCC----ccc-ccCCCCCEEEEECCEECCCcCHHHHHHH
Confidence 45677788764 4555555543 269999999874 333 8999999999999999999999999999
Q ss_pred HHcCCCeEEEEEEeCCC
Q psy9827 267 IDSSKEKLSLTIRREVP 283 (627)
Q Consensus 267 l~~~~~~v~l~V~r~~~ 283 (627)
++..+..+.|+|.|...
T Consensus 89 l~~~~~~v~l~v~R~~~ 105 (117)
T 2csj_A 89 LRKSGKIAAIVVKRPRK 105 (117)
T ss_dssp HHHSCSEEEEEEEEEEE
T ss_pred HhcCCCeEEEEEEECCc
Confidence 99988999999999654
No 310
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.63 E-value=1e-07 Score=83.99 Aligned_cols=83 Identities=16% Similarity=0.267 Sum_probs=68.2
Q ss_pred CCccEEEEEeecCCCCCeeeeeC---CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHcCC
Q psy9827 196 EPQTLRVQLSKSRKKDDFGIILG---NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDSSK 271 (627)
Q Consensus 196 ~~~~~~V~L~k~~~~~~~gi~~~---~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~ 271 (627)
......|.|.+...+.||.+..+ .|++|..|.++ ++|..+| |++||+|++|||+++.++++.++..+++..+
T Consensus 12 ~~~~~~v~l~k~~~glG~~l~~~~~~~gv~V~~V~~~----spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 87 (119)
T 1tp5_A 12 PREPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAG----GPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAG 87 (119)
T ss_dssp CCSCEEEEEECTTSCCCEEEEECGGGCCEEEEEECTT----SHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTSC
T ss_pred CCccEEEEEEECCCCccEEEecCCCCCCEEEEEECCC----CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 44667888988766655555554 48999999887 3555667 9999999999999999999999999999888
Q ss_pred CeEEEEEEeCC
Q psy9827 272 EKLSLTIRREV 282 (627)
Q Consensus 272 ~~v~l~V~r~~ 282 (627)
..+.|.|.|+.
T Consensus 88 ~~v~l~v~r~~ 98 (119)
T 1tp5_A 88 QTVTIIAQYKP 98 (119)
T ss_dssp SEEEEEEEECH
T ss_pred CeEEEEEEECC
Confidence 99999999854
No 311
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.63 E-value=7.4e-08 Score=81.38 Aligned_cols=80 Identities=21% Similarity=0.323 Sum_probs=63.7
Q ss_pred cEEEEEeecCCCCCeeeeeC--------CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHc
Q psy9827 199 TLRVQLSKSRKKDDFGIILG--------NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDS 269 (627)
Q Consensus 199 ~~~V~L~k~~~~~~~gi~~~--------~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~ 269 (627)
.+.+.+.+...+.||.+... .+++|..|.++ ++|..+| |++||+|++|||+++.++++.++..+++.
T Consensus 5 ~~~v~l~~~~~~lG~~i~~~~~~~~~~~~~~~V~~v~~~----s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (97)
T 2iwn_A 5 TFDVELTKNVQGLGITIAGYIGDKKLEPSGIFVKSITKS----SAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRH 80 (97)
T ss_dssp EEEEEEECBTTBSCEEEECCCCC----CCCCEEEEECTT----CHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHT
T ss_pred EEEEEEecCCCCCcEEEEccCCCCCCCCCCEEEEEeCCC----ChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 45666766655555555443 37999999887 3455566 99999999999999999999999999998
Q ss_pred CCCeEEEEEEeCC
Q psy9827 270 SKEKLSLTIRREV 282 (627)
Q Consensus 270 ~~~~v~l~V~r~~ 282 (627)
.+..+.|+|.|++
T Consensus 81 ~~~~v~l~v~r~g 93 (97)
T 2iwn_A 81 TGQTVLLTLMRRG 93 (97)
T ss_dssp CCSEEEEEEEEEE
T ss_pred CCCeEEEEEEeCC
Confidence 8889999998865
No 312
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=98.62 E-value=1.7e-07 Score=80.16 Aligned_cols=61 Identities=18% Similarity=0.343 Sum_probs=52.4
Q ss_pred CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEEEEEEeCCC
Q psy9827 219 NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 283 (627)
Q Consensus 219 ~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~l~V~r~~~ 283 (627)
.|++|..|.++ ++|..+| |++||+|++|||+++.+++++++..+|+..++.+.|+|.|...
T Consensus 39 ~g~~V~~V~~~----spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 100 (103)
T 2fcf_A 39 RGIFIKHVLED----SPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIIS 100 (103)
T ss_dssp --EEEEEECSS----SHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSSEEEEEECCCC
T ss_pred CCEEEEEeCCC----CcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEECCC
Confidence 37999999887 4555677 9999999999999999888999999999988899999998654
No 313
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.62 E-value=1e-07 Score=80.27 Aligned_cols=61 Identities=30% Similarity=0.428 Sum_probs=54.4
Q ss_pred cEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEEEEEEeCCCC
Q psy9827 220 KIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 284 (627)
Q Consensus 220 gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~l~V~r~~~~ 284 (627)
+++|..|.++ ++|..+||++||+|++|||+++.++++.++..+++..+..+.|.|.|++..
T Consensus 31 g~~V~~V~~~----spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~g~~ 91 (94)
T 1vb7_A 31 PIIVTKVTER----GKAEAADLRPGDIIVAINGQSAENMLHAEAQSKIRQSASPLRLQLDRSSGP 91 (94)
T ss_dssp EEECCCBCTT----SSHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSSEEEEEECCCCC
T ss_pred CeEEEEECCC----CHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEECCcC
Confidence 7999999876 456678899999999999999999889999999998879999999997654
No 314
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.60 E-value=8.5e-08 Score=81.84 Aligned_cols=68 Identities=16% Similarity=0.225 Sum_probs=54.0
Q ss_pred CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEeCCcccceeee
Q psy9827 71 KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQNRRDEYEHVVA 139 (627)
Q Consensus 71 ~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r~~~~~~~~v~ 139 (627)
..|++|..|.++|||++ ||++||+|++|||.++.++.+..........++.+.|++.|++......+.
T Consensus 6 ~~Gv~V~~V~~~spA~~-GL~~GD~I~~Ing~~v~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 73 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAAD-VLHAGDLITEIDGNAFKSSQEFIDYIHSKKVGDTVKINYKHGDKNEQADIK 73 (100)
T ss_dssp CCCEEEEEECTTSGGGG-TCCTTCEEEEETTBCCSSHHHHHHHHHTSCTTCEEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEEeCCCCchHH-CCCCCCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEECCEEEEEEEE
Confidence 46899999999999995 999999999999999988755443333234689999999998766554443
No 315
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.60 E-value=7.5e-08 Score=80.69 Aligned_cols=79 Identities=16% Similarity=0.321 Sum_probs=61.1
Q ss_pred cEEEEEeecCCCCCeeeeeC---CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEE
Q psy9827 199 TLRVQLSKSRKKDDFGIILG---NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLS 275 (627)
Q Consensus 199 ~~~V~L~k~~~~~~~gi~~~---~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~ 275 (627)
...|.|.|. .+.+||+.+. .+++|..|.+++ +|++.++|++||+|++|||+++ +++++++..+|+..++.+.
T Consensus 7 ~r~v~l~k~-~~~~lG~~i~~~~~~v~V~~V~~~s---pA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~~~~v~ 81 (91)
T 2e7k_A 7 GRMVGIRKT-AGEHLGVTFRVEGGELVIARILHGG---MVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNASGSVI 81 (91)
T ss_dssp SCBCCBCCC-TTCCCCEEEEESSSSEEEEEECSSS---HHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTCCSSBC
T ss_pred cEEEEEEEC-CCCcEeEEEEecCCCEEEEEECCCC---HHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcCCCeEE
Confidence 344566553 2345555553 689999999873 3444467999999999999999 7799999999998888999
Q ss_pred EEEEeCC
Q psy9827 276 LTIRREV 282 (627)
Q Consensus 276 l~V~r~~ 282 (627)
|+|.|..
T Consensus 82 l~v~~~~ 88 (91)
T 2e7k_A 82 LKILSGP 88 (91)
T ss_dssp EEEECCS
T ss_pred EEEEECC
Confidence 9998854
No 316
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.60 E-value=8.6e-08 Score=82.20 Aligned_cols=82 Identities=21% Similarity=0.300 Sum_probs=65.1
Q ss_pred ccEEEEEeecCCCCCeeeeeC----CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCe
Q psy9827 198 QTLRVQLSKSRKKDDFGIILG----NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEK 273 (627)
Q Consensus 198 ~~~~V~L~k~~~~~~~gi~~~----~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~ 273 (627)
..+.|.|. +..+++|.+..+ .+++|..|.++ ++|..+||++||+|++|||+++.++++.++..+++..+..
T Consensus 5 ~~~~v~l~-~~~~~G~~l~gg~~~~~~v~V~~V~~~----spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~ 79 (103)
T 1wf7_A 5 SSGSVSLV-GPAPWGFRLQGGKDFNMPLTISSLKDG----GKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGS 79 (103)
T ss_dssp CCEEEEEE-SSSCCSCCEEEETTTTEEEEECCCCTT----CHHHHTTCCTTCBEEEETTEECSSCCHHHHHHHHHHCSSE
T ss_pred CEEEEEEe-CCCccCEEEeccccCCCCEEEEEECCC----CHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 34566676 344556666554 26899999876 4666778999999999999999999999999999988889
Q ss_pred EEEEEEeCCCC
Q psy9827 274 LSLTIRREVPR 284 (627)
Q Consensus 274 v~l~V~r~~~~ 284 (627)
+.|+|.|++..
T Consensus 80 v~l~v~R~g~~ 90 (103)
T 1wf7_A 80 LNMTLQRASAA 90 (103)
T ss_dssp EEEEECCCSCC
T ss_pred EEEEEEeCCCc
Confidence 99999987653
No 317
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.58 E-value=1.1e-07 Score=84.98 Aligned_cols=85 Identities=15% Similarity=0.229 Sum_probs=66.8
Q ss_pred CCccEEEEEee-cCCCCCeeeeeC---------CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHH
Q psy9827 196 EPQTLRVQLSK-SRKKDDFGIILG---------NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEAR 264 (627)
Q Consensus 196 ~~~~~~V~L~k-~~~~~~~gi~~~---------~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~ 264 (627)
....+.|.|.+ ...+.||.+..+ .+++|..|.++ ++|..+| |++||+|++|||+++.+++++++.
T Consensus 13 ~~~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~----spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~ 88 (129)
T 2dmz_A 13 LFETYNVELVRKDGQSLGIRIVGYVGTSHTGEASGIYVKSVIPG----SAAYHNGHIQVNDKIVAVDGVNIQGFANHDVV 88 (129)
T ss_dssp CEEEEEEEECCCTTCCCCEEEEEECCCSSSCCCCEEEEEEECTT----SHHHHHTCCCSSCBEEEETTBCCTTCCHHHHH
T ss_pred CCcEEEEEEEeCCCCCcCEEEEeecCCcccCCCCCEEEEEeCCC----CHHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 34567788865 344455555441 47999999887 3455566 999999999999999999999999
Q ss_pred HHHHcCCCeEEEEEEeCCCC
Q psy9827 265 KLIDSSKEKLSLTIRREVPR 284 (627)
Q Consensus 265 ~~l~~~~~~v~l~V~r~~~~ 284 (627)
.+|+..+..+.|.|.|++..
T Consensus 89 ~~l~~~~~~v~l~v~R~~~~ 108 (129)
T 2dmz_A 89 EVLRNAGQVVHLTLVRRKTS 108 (129)
T ss_dssp HHHHHCCSSEEEEEEEESSS
T ss_pred HHHHcCCCeEEEEEEeCCcc
Confidence 99999888999999997653
No 318
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.58 E-value=1.8e-07 Score=90.03 Aligned_cols=80 Identities=23% Similarity=0.431 Sum_probs=67.5
Q ss_pred eEEEeccC--CceeEEEEccC----CCCEEEEEeCCCChhhhcC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeE
Q psy9827 52 RFITFQKE--GSVGIRLTGGN----KVGIFVTAVQPGSPASLQG-LQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIH 124 (627)
Q Consensus 52 r~v~l~k~--g~lG~~i~g~~----~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~ 124 (627)
..+.+.+. ..|||++.... ..|++|..|.++|||+++| |++||+|++|||.++.++++.++...+...+..+.
T Consensus 109 ~~v~l~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~ 188 (196)
T 1p1d_A 109 FHVKLPKKHSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQCEDLVK 188 (196)
T ss_dssp EEEEECCCSSCCCCCEEECSCSSSTTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHCTTCEE
T ss_pred EEEEecCCCCCCcCEEEECCCCCCCCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEE
Confidence 34445432 37999998753 3589999999999999999 99999999999999999889999888887799999
Q ss_pred EEEEeCC
Q psy9827 125 LIVQNRR 131 (627)
Q Consensus 125 L~v~r~~ 131 (627)
|+|.|+.
T Consensus 189 l~v~R~~ 195 (196)
T 1p1d_A 189 LKIRKDE 195 (196)
T ss_dssp EEEECCC
T ss_pred EEEEeCC
Confidence 9999754
No 319
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=98.58 E-value=1.8e-07 Score=83.19 Aligned_cols=80 Identities=19% Similarity=0.262 Sum_probs=63.2
Q ss_pred cEEEEEeecC-CCCCeeeeeC----CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHcCCC
Q psy9827 199 TLRVQLSKSR-KKDDFGIILG----NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDSSKE 272 (627)
Q Consensus 199 ~~~V~L~k~~-~~~~~gi~~~----~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~ 272 (627)
+..|.+.+.. .+.||.+..+ .+++|..|.+| ++|..+| |++||+|++|||+++.+++++++..+++..++
T Consensus 20 ~~~v~l~k~~~~~lG~~i~gg~~~~~~~~V~~v~~g----spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~ 95 (125)
T 3hpk_A 20 PGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDN----TPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKG 95 (125)
T ss_dssp EEEEEEECCTTSCCCEEEEECSSCCSSEEEEEECTT----SHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSCS
T ss_pred CeEEEEEeCCCCCcCEEEeccCCCCCCEEEEEeCCC----CHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 4566777653 2344544443 36999999887 3455566 99999999999999999999999999999988
Q ss_pred eEEEEEEeCC
Q psy9827 273 KLSLTIRREV 282 (627)
Q Consensus 273 ~v~l~V~r~~ 282 (627)
.++|+|.|..
T Consensus 96 ~v~l~v~r~~ 105 (125)
T 3hpk_A 96 EVTIHYNKLQ 105 (125)
T ss_dssp EEEEEEEEEC
T ss_pred eEEEEEEECC
Confidence 9999998843
No 320
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.58 E-value=1.1e-07 Score=82.94 Aligned_cols=65 Identities=28% Similarity=0.414 Sum_probs=52.1
Q ss_pred CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEeCCcccceee
Q psy9827 71 KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQNRRDEYEHVV 138 (627)
Q Consensus 71 ~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r~~~~~~~~v 138 (627)
..|++|..|.++|||+++||++||+|++|||.++.++.... ..+ ..++.+.|++.|++......+
T Consensus 34 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~--~~l-~~g~~v~l~v~R~g~~~~~~v 98 (112)
T 2p3w_A 34 SSGIYVQEVAPNSPSQRGGIQDGDIIVKVNGRPLVDSSELQ--EAV-LTESPLLLEVRRGNDDLLFSI 98 (112)
T ss_dssp CSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHH--HHH-HHCSSEEEEEEETTEEEEEEE
T ss_pred CCCeEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHHHH--HHH-hCCCeEEEEEEECCEEEEEEE
Confidence 36899999999999999999999999999999998764433 333 357899999998775544433
No 321
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.58 E-value=1e-07 Score=83.08 Aligned_cols=84 Identities=17% Similarity=0.254 Sum_probs=67.9
Q ss_pred CCCccEEEEEeecCCCCCeeeeeC---CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHcC
Q psy9827 195 PEPQTLRVQLSKSRKKDDFGIILG---NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDSS 270 (627)
Q Consensus 195 ~~~~~~~V~L~k~~~~~~~gi~~~---~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~ 270 (627)
..+..+.|.|.+...+.+|.+..+ .+++|..|.++ ++|..++ |++||+|++|||+++.++++.++..+++..
T Consensus 12 ~~~~~~~v~l~k~~~glG~~l~~~~~~~gv~V~~V~~~----s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~~ 87 (113)
T 1um7_A 12 DAREPRKIILHKGSTGLGFNIVGGEDGEGIFVSFILAG----GPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRA 87 (113)
T ss_dssp CCCSEEEEEEECCSSCSSBCCBCCSTTCCCBCCCBCSS----SHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHSC
T ss_pred CCCceEEEEEEECCCcccEEEEeccCCCCEEEEEECCC----CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 345678888988755555555444 48999999876 4555667 999999999999999999999999999988
Q ss_pred CCeEEEEEEeCC
Q psy9827 271 KEKLSLTIRREV 282 (627)
Q Consensus 271 ~~~v~l~V~r~~ 282 (627)
+..+.|.|.|+.
T Consensus 88 ~~~v~l~v~r~~ 99 (113)
T 1um7_A 88 GQSVTIVAQYRP 99 (113)
T ss_dssp CSEEEEEEECCH
T ss_pred CCcEEEEEEECc
Confidence 889999998864
No 322
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.57 E-value=2e-07 Score=82.97 Aligned_cols=80 Identities=18% Similarity=0.316 Sum_probs=64.6
Q ss_pred ccEEEEEeecCCCCCeeeee-CCcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHc--CCCe
Q psy9827 198 QTLRVQLSKSRKKDDFGIIL-GNKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDS--SKEK 273 (627)
Q Consensus 198 ~~~~V~L~k~~~~~~~gi~~-~~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~--~~~~ 273 (627)
..+.+.|.+...+.||.+.. ..+++|..|.++ ++|..+| |++||+|++|||+++.++++++++.+|+. .+..
T Consensus 27 ~~~~~~l~k~~~glG~~i~~~~~~v~V~~V~~g----spA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~~ 102 (126)
T 1wif_A 27 KVIQTKLTVGNLGLGLVVIQNGPYLQISHLINK----GAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIGTV 102 (126)
T ss_dssp CEEEEEEECCTTCCCCCEEEETTEEEECCCCTT----SSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSCE
T ss_pred ceEEEEEecCCceEeEEEEcCCCcEEEEEECCC----CHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCE
Confidence 45677788776655555554 357999999887 3555566 99999999999999998899999999997 4578
Q ss_pred EEEEEEeC
Q psy9827 274 LSLTIRRE 281 (627)
Q Consensus 274 v~l~V~r~ 281 (627)
++|+|.|+
T Consensus 103 v~l~V~R~ 110 (126)
T 1wif_A 103 LQIKAYRG 110 (126)
T ss_dssp EEEEEESS
T ss_pred EEEEEEEC
Confidence 99999997
No 323
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.56 E-value=1.6e-07 Score=83.25 Aligned_cols=84 Identities=21% Similarity=0.290 Sum_probs=65.9
Q ss_pred CccEEEEEeecC-CCCCeeeeeC--------CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHH
Q psy9827 197 PQTLRVQLSKSR-KKDDFGIILG--------NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKL 266 (627)
Q Consensus 197 ~~~~~V~L~k~~-~~~~~gi~~~--------~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~ 266 (627)
+..+.|.|.+.. .+.+|.+..+ .+++|..|.++ ++|..++ |++||+|++|||+++.+++++++..+
T Consensus 14 ~~~~~v~l~k~~~~glG~~l~~~~~~~~~~~~~~~V~~V~~~----spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~ 89 (122)
T 1v5q_A 14 TETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEAD----SPAERCGVLQIGDRVMAINGIPTEDSTFEEANQL 89 (122)
T ss_dssp EEEEEEEECCCSSSSSCEEEECCSCCSSSCSSCCEEEEECTT----SHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHH
T ss_pred ceeEEEEEEeCCCCccCEEEecccccCCcCCCCcEEEEECCC----ChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 355678887763 4445555432 36899999876 4556677 99999999999999998889999999
Q ss_pred HHcC--CCeEEEEEEeCCCC
Q psy9827 267 IDSS--KEKLSLTIRREVPR 284 (627)
Q Consensus 267 l~~~--~~~v~l~V~r~~~~ 284 (627)
|+.. +..+.|+|.|+...
T Consensus 90 l~~~~~g~~v~l~v~R~~~~ 109 (122)
T 1v5q_A 90 LRDSSITSKVTLEIEFDVAE 109 (122)
T ss_dssp HHHHTTTTCEEEEEEEECCC
T ss_pred HHhCCCCCeEEEEEEECCcc
Confidence 9975 57999999997654
No 324
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.56 E-value=2.1e-07 Score=81.41 Aligned_cols=82 Identities=17% Similarity=0.237 Sum_probs=65.6
Q ss_pred ccEEEEEeec-CCCCCeeeeeC---CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCe
Q psy9827 198 QTLRVQLSKS-RKKDDFGIILG---NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEK 273 (627)
Q Consensus 198 ~~~~V~L~k~-~~~~~~gi~~~---~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~ 273 (627)
.+..+.+.+. ....+|++... .|++|..|.++ ++|..+||++||+|++|||+++.++++.++..+++..+..
T Consensus 13 dp~~~~l~~~~~~~~G~~l~~~~~~~g~~V~~V~~~----spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 88 (114)
T 2edz_A 13 NPRECKLSKQEGQNYGFFLRIEKDTDGHLIRVIEEG----SPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRKSGNS 88 (114)
T ss_dssp CCEEEEEECCTTCCCSCEEECCTTCCSCEEECCCTT----CTTGGGTCCTTCEEEEESSSBCSSSCHHHHHHHHHHTCSE
T ss_pred CCEEEEEeCCCCCcccEEEEEecCCCCeEEEEeCCC----ChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCE
Confidence 4556666654 23455555543 58999999886 4666788999999999999999998899999999988889
Q ss_pred EEEEEEeCCC
Q psy9827 274 LSLTIRREVP 283 (627)
Q Consensus 274 v~l~V~r~~~ 283 (627)
+.|+|.|++.
T Consensus 89 v~l~v~R~~~ 98 (114)
T 2edz_A 89 VTLLVLDGDS 98 (114)
T ss_dssp EEEEEECHHH
T ss_pred EEEEEEECCc
Confidence 9999998653
No 325
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.56 E-value=2e-08 Score=84.31 Aligned_cols=64 Identities=20% Similarity=0.397 Sum_probs=52.5
Q ss_pred CEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhc--CCCeeEEEEEeCCcccceeee
Q psy9827 73 GIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLS--LQDQIHLIVQNRRDEYEHVVA 139 (627)
Q Consensus 73 gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~--~g~~V~L~v~r~~~~~~~~v~ 139 (627)
|++|..|.++|||++ ||++||+|++|||.++.++. +....+.. .++.+.|+|.|++......+.
T Consensus 2 Gv~V~~V~~~spA~~-GL~~GD~I~~InG~~v~~~~--~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 67 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-KIEVGDKIISADGKNYQSAE--KLIDYISSKKAGDKVTLKIEREEKEKRVTLT 67 (91)
T ss_dssp CSSCCCCCCSSCCSS-CCCSSCEEEEETTBCCSSHH--HHHHHHSSCCSSCEECEEEESSSCEECCCEE
T ss_pred ceEEEEECCCChHHH-cCCCCCEEEEECCEECCCHH--HHHHHHHcCCCCCEEEEEEEECCEEEEEEEE
Confidence 688999999999999 99999999999999998764 44445553 589999999998876655544
No 326
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.55 E-value=7.7e-08 Score=81.16 Aligned_cols=68 Identities=19% Similarity=0.308 Sum_probs=54.0
Q ss_pred CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEeCCcccceeee
Q psy9827 71 KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQNRRDEYEHVVA 139 (627)
Q Consensus 71 ~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r~~~~~~~~v~ 139 (627)
..|++|..|.++|||++ ||++||+|++|||.++.++.+..........++.+.|++.|++......+.
T Consensus 4 ~~Gv~V~~V~~~spA~~-GL~~GD~Il~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 71 (94)
T 2kl1_A 4 AKGVYVMSVLPNMPAAG-RLEAGDRIAAIDGQPINTSEQIVSYVREKQAGDRVRVTFIRDRKQHEAELV 71 (94)
T ss_dssp CCCEECCCCCTTSTTBT-TBCTTCEEEEETTBCCCCHHHHHHHHHHSCTTCCEEEEEEETTEEEEEEEC
T ss_pred CCcEEEEEECCCChHHh-CCCCCCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEECCEEEEEEEE
Confidence 45899999999999999 999999999999999987654433322224689999999998776655543
No 327
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.55 E-value=1.9e-07 Score=82.17 Aligned_cols=71 Identities=18% Similarity=0.250 Sum_probs=56.6
Q ss_pred CCCCeeeeeC-----CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcC----CCeEEEEEE
Q psy9827 209 KKDDFGIILG-----NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS----KEKLSLTIR 279 (627)
Q Consensus 209 ~~~~~gi~~~-----~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~----~~~v~l~V~ 279 (627)
.+.||.+.++ ..++|.+|.++ ++|++.++|++||+|++|||+++.++++++++.+|+.. +..++|+|.
T Consensus 28 ~glG~~i~gg~~~~~~~i~I~~V~~g---spA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~g~~v~l~v~ 104 (118)
T 1v6b_A 28 GSLDLALEGGVDSPVGKVVVSAVYEG---GAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQGGDWIDLVVA 104 (118)
T ss_dssp SCCCCEEEEBTTSSSCSEEEEECCTT---SHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred CccCEEEEcccCCCCCCEEEEEECCC---CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhcCCCeEEEEEE
Confidence 3555555543 24999999987 33444459999999999999999999999999999864 679999999
Q ss_pred eCC
Q psy9827 280 REV 282 (627)
Q Consensus 280 r~~ 282 (627)
|..
T Consensus 105 r~~ 107 (118)
T 1v6b_A 105 VCP 107 (118)
T ss_dssp CCC
T ss_pred eCC
Confidence 854
No 328
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.54 E-value=2.9e-07 Score=79.25 Aligned_cols=74 Identities=16% Similarity=0.190 Sum_probs=57.1
Q ss_pred ceeEEEEccC--CCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEeCCccc
Q psy9827 61 SVGIRLTGGN--KVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQNRRDEY 134 (627)
Q Consensus 61 ~lG~~i~g~~--~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r~~~~~ 134 (627)
.+|+.....+ -.|+.|..+.|+|||+++||++||+|++|||.++.++.+..........++.+.|+|.|++...
T Consensus 24 ~~g~~~~~~~~~~~G~~V~~~~pas~A~~aGl~~GDvI~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R~g~~~ 99 (105)
T 2i4s_A 24 YVRLSQVKRDDKVLGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERDGQQH 99 (105)
T ss_dssp HEEEEEEEETTEEEEEEEEECSCTHHHHHHTCCTTCEEEEETTEETTSTTHHHHHHHHHTTCSEEEEEEEETTEEE
T ss_pred hceeEEEecCCcEEEEEEecCCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCeEEEEEEECCEEE
Confidence 4666554321 2367788888888999999999999999999999999887654443467889999999876543
No 329
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.54 E-value=3.6e-07 Score=81.09 Aligned_cols=61 Identities=18% Similarity=0.343 Sum_probs=53.6
Q ss_pred CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEEEEEEeCCC
Q psy9827 219 NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 283 (627)
Q Consensus 219 ~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~l~V~r~~~ 283 (627)
.|++|..|.++ ++|..+| |++||+|++|||+++.+++++++..+|+..++.+.|+|.|...
T Consensus 59 ~gv~V~~V~~~----spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 120 (123)
T 2iwq_A 59 RGIFIKHVLED----SPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIIS 120 (123)
T ss_dssp CSEEEEEECSS----SHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEECCCC
T ss_pred CCEEEEEECCC----ChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCc
Confidence 37999999887 4555677 9999999999999999888999999999988899999998653
No 330
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.54 E-value=3e-07 Score=80.70 Aligned_cols=83 Identities=20% Similarity=0.278 Sum_probs=66.3
Q ss_pred ccEEEEEeecCCCCCeeeeeC--CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEE
Q psy9827 198 QTLRVQLSKSRKKDDFGIILG--NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLS 275 (627)
Q Consensus 198 ~~~~V~L~k~~~~~~~gi~~~--~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~ 275 (627)
....|.+.+.....+|.+..+ .|++|..|.++ ++|..+||++||+|++|||+++.+++..++...+...+..+.
T Consensus 19 ~~~~v~l~~~~~~lG~~~~~~~~~gv~V~~V~~~----spA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~ 94 (117)
T 1uit_A 19 EPRHVKVQKGSEPLGISIVSGEKGGIYVSKVTVG----SIAHQAGLEYGDQLLEFNGINLRSATEQQARLIIGQQCDTIT 94 (117)
T ss_dssp CCEEEEEECSSCCCCEEEEECTTSCEEEEEECTT----SHHHHHTCCTTCEECEETTEETTTCCHHHHHHHTTSCCSEEE
T ss_pred CCEEEEEEeCCCCccEEEEccCCCCEEEEEECCC----CHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 345788887765555655554 58999999887 455567899999999999999999888888877777788999
Q ss_pred EEEEeCCCC
Q psy9827 276 LTIRREVPR 284 (627)
Q Consensus 276 l~V~r~~~~ 284 (627)
|+|.|++..
T Consensus 95 l~v~r~~~~ 103 (117)
T 1uit_A 95 ILAQYNPHV 103 (117)
T ss_dssp EEECCCSCC
T ss_pred EEEEECCch
Confidence 999997654
No 331
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.51 E-value=2.4e-07 Score=78.22 Aligned_cols=59 Identities=14% Similarity=0.112 Sum_probs=48.0
Q ss_pred EEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEeCCc
Q psy9827 74 IFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQNRRD 132 (627)
Q Consensus 74 i~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r~~~ 132 (627)
.+|..|.++|||+++||++||+|++|||..+.++.+..........+..+.|+|.|++.
T Consensus 4 p~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~d~~~~l~~~~~~~~v~l~v~R~g~ 62 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDAVRLQLVDKIGDESTTITVAPFGS 62 (95)
T ss_dssp CBEEEECTTSHHHHTTCCTTCEEEEETTEECSSHHHHHHHHHHTTTCSEEEEEEECTTC
T ss_pred CEEEeeCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHHhcCCCcEEEEEEECCC
Confidence 46889999999999999999999999999999886554433333344799999998764
No 332
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.51 E-value=2.6e-07 Score=88.64 Aligned_cols=82 Identities=17% Similarity=0.272 Sum_probs=65.4
Q ss_pred CccEEEEEeecC-CCCCeeeeeC----CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCC
Q psy9827 197 PQTLRVQLSKSR-KKDDFGIILG----NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSK 271 (627)
Q Consensus 197 ~~~~~V~L~k~~-~~~~~gi~~~----~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~ 271 (627)
.....|.|.+.. .+.||.+..+ .+++|..|.+| ++|..+||++||+|++|||.++.+++++++..+++. +
T Consensus 83 ~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~V~~V~~g----spA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~l~~-~ 157 (192)
T 3k1r_A 83 RKLKEVRLDRLHPEGLGLSVRGGLEFGCGLFISHLIKG----GQADSVGLQVGDEIVRINGYSISSCTHEEVINLIRT-E 157 (192)
T ss_dssp SSCEEEEEETTSTTCCCEEEEEEGGGTEEEEEEEECTT----SHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHTS-S
T ss_pred CceEEEEEEeCCCCceeEEEEcccccCCCEEEEEECCC----ChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHcC-C
Confidence 345678888763 3344444333 38999999887 355566799999999999999999999999999998 8
Q ss_pred CeEEEEEEeCCC
Q psy9827 272 EKLSLTIRREVP 283 (627)
Q Consensus 272 ~~v~l~V~r~~~ 283 (627)
..+.|+|.|++.
T Consensus 158 ~~v~l~v~r~g~ 169 (192)
T 3k1r_A 158 KTVSIKVRHIGL 169 (192)
T ss_dssp SEEEEEEEECCE
T ss_pred CeEEEEEEECCc
Confidence 899999999765
No 333
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.51 E-value=2.9e-07 Score=81.04 Aligned_cols=82 Identities=18% Similarity=0.272 Sum_probs=60.9
Q ss_pred cEEEEEeec-CCCCCeeeeeC-----CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHcCC
Q psy9827 199 TLRVQLSKS-RKKDDFGIILG-----NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDSSK 271 (627)
Q Consensus 199 ~~~V~L~k~-~~~~~~gi~~~-----~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~ 271 (627)
...+.|.+. ..+.||.+..+ .|++|..|.++ ++|..+| |++||+|++|||+++.++++.+++.+++..+
T Consensus 16 ~~~v~l~~~~~~~lG~~i~g~~~~~~~gv~V~~V~~~----spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~ 91 (119)
T 1x6d_A 16 IHVTILHKEEGAGLGFSLAGGADLENKVITVHRVFPN----GLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAR 91 (119)
T ss_dssp EEEEEEECCTTSCCSEEEECCSSSSCSSCEEEEECSS----SHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTT
T ss_pred eEEEEEEeCCCCccCEEEeCCCCCCCCCEEEEEECCC----ChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 345555553 33444544443 37999999887 3555566 9999999999999999999999999999876
Q ss_pred Ce-EEEEEEeCCCC
Q psy9827 272 EK-LSLTIRREVPR 284 (627)
Q Consensus 272 ~~-v~l~V~r~~~~ 284 (627)
+. +.+++.|+...
T Consensus 92 ~~~~~l~v~R~~~~ 105 (119)
T 1x6d_A 92 EPRQAVIVTRKLTP 105 (119)
T ss_dssp SSSEEEEEEECCCS
T ss_pred CCeEEEEEEcCCCc
Confidence 64 55778886654
No 334
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.50 E-value=1.5e-07 Score=80.71 Aligned_cols=72 Identities=25% Similarity=0.393 Sum_probs=59.5
Q ss_pred CCCCeeeeeC----CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEEEEEEeCCCC
Q psy9827 209 KKDDFGIILG----NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 284 (627)
Q Consensus 209 ~~~~~gi~~~----~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~l~V~r~~~~ 284 (627)
...+|.+..+ .+++|..|.++ ++|..++|++||+|++|||+++.+++++++..+|+..+..+.|+|.|++..
T Consensus 15 ~~lG~~l~~g~~~~~~~~V~~V~~~----spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~g~~ 90 (103)
T 1v5l_A 15 APWGFRLSGGIDFNQPLVITRITPG----SKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAETR 90 (103)
T ss_dssp SCCSBCCEEETTTTEEEECSCBCTT----STTGGGTCCTTCBEEEETTEECSSCCHHHHHHHHTTCCSEEECEECCCTTT
T ss_pred CCcCEEEeccccCCCCeEEEEECCC----CHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEECCeE
Confidence 3455555544 27999999876 456668899999999999999998889999999998888999999997654
No 335
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=98.50 E-value=1.8e-08 Score=105.20 Aligned_cols=117 Identities=21% Similarity=0.366 Sum_probs=21.4
Q ss_pred cCC-CCCCCCCC-------CceeeeecccccCCCCCccccccCCCCceEE----------E----eccCCceeEEEEcc-
Q psy9827 13 KEG-SVGIRLTG-------GNKVGIFVTAVQPGSPDLFSIFFVEPDPRFI----------T----FQKEGSVGIRLTGG- 69 (627)
Q Consensus 13 ~~~-~~~~~~~~-------g~~iGin~~ai~~~~~d~~~~~~~~~~~r~v----------~----l~k~g~lG~~i~g~- 69 (627)
+++ +++.++|+ |++|||+ ++... .+++|++|..... . ..+.+.||+.+...
T Consensus 162 ~~d~~i~~G~SGGPlv~~~G~vvGI~-s~~~~-----~g~~~aip~~~i~~~l~~~~~~~~~g~~~~~r~~lGi~~~~~~ 235 (332)
T 3num_A 162 QTDAIINYGNAGGPLVNLDGEVIGIN-TLKVT-----AGISFAIPSDKIKKFLTESHDRQAKGKAITKKKYIGIRMMSLT 235 (332)
T ss_dssp EESSCCCTTTTTSEEEETTSCEEEEE-EEEEE-----TTEEEEEEHHHHHHHHHHHCC----------------------
T ss_pred EEECCcCCCCcHHHhhCCCCcEEEEE-eeEec-----ccceEEECHHHHHHHHHHHhhhhccCcccccccccceEEEecC
Confidence 444 77777764 6778999 55443 3567777733111 0 01235688876532
Q ss_pred ----------------CCCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEeCCcc
Q psy9827 70 ----------------NKVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQNRRDE 133 (627)
Q Consensus 70 ----------------~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r~~~~ 133 (627)
...|++|..|.++|||+++||++||+|++|||.++.++.+.... ++ .++.++|+|.|++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~--l~-~~~~v~l~v~R~g~~ 312 (332)
T 3num_A 236 SSKAKELKDRHRDFPDVISGAYIIEVIPDTPAEAGGLKENDVIISINGQSVVSANDVSDV--IK-RESTLNMVVRRGNED 312 (332)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHhhhhhhhccccCCCCCceEEEEeccCCChHHcCCCCCCEEEEECCEECCCHHHHHHH--Hh-CCCeEEEEEEECCEE
Confidence 13589999999999999999999999999999999877654433 33 378899999987765
Q ss_pred cceee
Q psy9827 134 YEHVV 138 (627)
Q Consensus 134 ~~~~v 138 (627)
....+
T Consensus 313 ~~~~v 317 (332)
T 3num_A 313 IMITV 317 (332)
T ss_dssp -----
T ss_pred EEEEE
Confidence 54443
No 336
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.49 E-value=7.7e-08 Score=83.80 Aligned_cols=81 Identities=15% Similarity=0.173 Sum_probs=63.9
Q ss_pred EEEEEeecCCCCCeeeeeCCcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCC-eEEEEE
Q psy9827 200 LRVQLSKSRKKDDFGIILGNKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKE-KLSLTI 278 (627)
Q Consensus 200 ~~V~L~k~~~~~~~gi~~~~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~-~v~l~V 278 (627)
..|.|.+...+.+|.+....+++|..|.++ ++|..+||++||+|++|||+++.+++++++..+|+...+ .+.|+|
T Consensus 17 r~v~l~~~~~~~G~~l~~~~~v~V~~V~~~----spA~~aGL~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~~v~l~V 92 (111)
T 1vae_A 17 RGIHFTVEEGDLGFTLRGNTPVQVHFLDPH----CSASLAGAKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEVEMKV 92 (111)
T ss_dssp CCCCEECCSSCCSCCEESSSSCEECCCCTT----SSHHHHHCCTTCEEEEETTEECSSCCHHHHHHHHHHTTTSEECEEE
T ss_pred eEEEEEcCCCcccEEEeCCCCEEEEEECCC----CHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEE
Confidence 346677765555555555678999999876 456667899999999999999999999999999998765 599999
Q ss_pred EeCCCC
Q psy9827 279 RREVPR 284 (627)
Q Consensus 279 ~r~~~~ 284 (627)
.+....
T Consensus 93 ~~~~~~ 98 (111)
T 1vae_A 93 VSLLDS 98 (111)
T ss_dssp ECEECC
T ss_pred EecCCC
Confidence 885443
No 337
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.49 E-value=6.8e-07 Score=78.15 Aligned_cols=80 Identities=19% Similarity=0.277 Sum_probs=63.2
Q ss_pred ccEEEEEeecCCC-CCeeeeeC----CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHcCC
Q psy9827 198 QTLRVQLSKSRKK-DDFGIILG----NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDSSK 271 (627)
Q Consensus 198 ~~~~V~L~k~~~~-~~~gi~~~----~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~ 271 (627)
....|.|.+...+ .||.+..+ .+++|..|.++ ++|..+| |++||+|++|||.++.+.+++++..+++..+
T Consensus 24 ~~~~V~l~~~~~~~lG~~l~~~~~~~~~~~V~~V~~g----spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~ 99 (114)
T 2gzv_A 24 VPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDN----TPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 99 (114)
T ss_dssp CCEEEEEECCTTSCCSEEEEECCC--CCEEEEEECTT----SHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred CCEEEEEEECCCCcEeEEEEeCCCCCCCEEEEEECCC----ChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 4567888876533 55555544 26999999887 3555667 9999999999999998889999999999888
Q ss_pred CeEEEEEEeC
Q psy9827 272 EKLSLTIRRE 281 (627)
Q Consensus 272 ~~v~l~V~r~ 281 (627)
+.+.|+|.+.
T Consensus 100 ~~v~l~v~~~ 109 (114)
T 2gzv_A 100 GEVTIHYNKL 109 (114)
T ss_dssp SEEEEEEECC
T ss_pred CeEEEEEEec
Confidence 8888888663
No 338
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.48 E-value=1.2e-07 Score=101.30 Aligned_cols=98 Identities=20% Similarity=0.314 Sum_probs=76.9
Q ss_pred cCCCCCccccccCCCCceEEEeccC---CceeEEEEcc--CCCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCH
Q psy9827 35 QPGSPDLFSIFFVEPDPRFITFQKE---GSVGIRLTGG--NKVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITR 109 (627)
Q Consensus 35 ~~~~~d~~~~~~~~~~~r~v~l~k~---g~lG~~i~g~--~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~ 109 (627)
....+|+|+.++...+.+.+..... +++|+.+... .+.+++|..|.+||||+++||++||+|++|||.++.+++.
T Consensus 57 l~~L~D~hs~~~~~~~~~~~~~~~~g~~~giG~~~~~~~~~~~~~~V~~v~~~spA~~aGl~~GD~I~~Ing~~v~~~~~ 136 (388)
T 1fc6_A 57 LAVLDDPFTRFLEPSRLAALRRGTAGSVTGVGLEITYDGGSGKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSL 136 (388)
T ss_dssp HHTTCCTTCEEECHHHHHHHHHCSSSSCBBCSEEEEECTTCSSCEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCH
T ss_pred HHhcCCCcceecCHHHHHHHHHhhcCceEEEEEEEEEeecCCCcEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCH
Confidence 3666799998876544433221212 3799988754 2468999999999999999999999999999999999987
Q ss_pred HHHHHHHh-cCCCeeEEEEEeCCc
Q psy9827 110 EEAVLFLL-SLQDQIHLIVQNRRD 132 (627)
Q Consensus 110 ~~~~~~l~-~~g~~V~L~v~r~~~ 132 (627)
.++..+++ ..+..|+|+|.|.+.
T Consensus 137 ~~~~~~l~~~~g~~v~l~v~r~g~ 160 (388)
T 1fc6_A 137 YDVSDLLQGEADSQVEVVLHAPGA 160 (388)
T ss_dssp HHHHHHHCBSTTCEEEEEEEETTE
T ss_pred HHHHHHHhcCCCCEEEEEEEeCCC
Confidence 77777776 568899999998765
No 339
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.46 E-value=1.6e-07 Score=80.17 Aligned_cols=83 Identities=22% Similarity=0.338 Sum_probs=61.6
Q ss_pred ccEEEEEeecCCCCCeeeee--C----CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCC
Q psy9827 198 QTLRVQLSKSRKKDDFGIIL--G----NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSK 271 (627)
Q Consensus 198 ~~~~V~L~k~~~~~~~gi~~--~----~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~ 271 (627)
....+.+.+.....+|||.+ . .+++|..|.++ ++|..++|++||+|++|||+++.+++..+++..++. .
T Consensus 8 ~~~~v~l~~~~~~~~lG~~~~~~~~~~~g~~V~~V~~~----spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~-~ 82 (101)
T 1uez_A 8 EVRLVSLRRAKAHEGLGFSIRGGSEHGVGIYVSLVEPG----SLAEKEGLRVGDQILRVNDKSLARVTHAEAVKALKG-S 82 (101)
T ss_dssp CCEEECCCCCCTTTCSSEEEEECTTTTCCEEEEEECTT----SHHHHHTCCSSCCEEEETTEECSSCCHHHHHHHSSS-S
T ss_pred ccEEEEEEECCCCCcccEEEeCCCCCCCCEEEEEECCC----CHHHHcCCCCCCEEEEECCEECCCcCHHHHHHhhcC-C
Confidence 34556666644445566655 3 38999999876 456667899999999999999999888777666644 4
Q ss_pred CeEEEEEEeCCCCC
Q psy9827 272 EKLSLTIRREVPRP 285 (627)
Q Consensus 272 ~~v~l~V~r~~~~~ 285 (627)
..+.|+|.|++..+
T Consensus 83 ~~v~l~v~R~g~~p 96 (101)
T 1uez_A 83 KKLVLSVYSAGRIS 96 (101)
T ss_dssp SSCCEEECCCCCCS
T ss_pred CeEEEEEEECCccC
Confidence 58899999876544
No 340
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.46 E-value=4.5e-07 Score=80.86 Aligned_cols=83 Identities=14% Similarity=0.199 Sum_probs=65.8
Q ss_pred CCccEEEEEeecCCCCCeeeeeCC---cEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCC
Q psy9827 196 EPQTLRVQLSKSRKKDDFGIILGN---KIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKE 272 (627)
Q Consensus 196 ~~~~~~V~L~k~~~~~~~gi~~~~---gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~ 272 (627)
.+.+..|.+.+...+.||.+.... +++|..|.++ ++|..+||++||+|++|||+++.+++++++..+|+...+
T Consensus 7 ~~~~r~v~l~~~~~g~G~~l~~~~~~~gv~V~~V~~~----spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 82 (128)
T 2kjd_A 7 MLRPRLCTMKKGPSGYGFNLHSDKSKPGQFIRSVDPD----SPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGD 82 (128)
T ss_dssp TCCCEEEEEECCSSSCCEEEEECSSSCSEEEEEECTT----SHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTCS
T ss_pred CCCcEEEEEecCCCcccEEEEecCCCCCEEEEEeCCC----ChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 345677888887665555555543 8999999886 455667899999999999999998889999999998754
Q ss_pred -eEEEEEEeCC
Q psy9827 273 -KLSLTIRREV 282 (627)
Q Consensus 273 -~v~l~V~r~~ 282 (627)
.+.|+|.|++
T Consensus 83 ~~~~l~v~R~g 93 (128)
T 2kjd_A 83 ETKLLVVDRET 93 (128)
T ss_dssp EEEEEEECHHH
T ss_pred CEEEEEEEeCC
Confidence 5668888854
No 341
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=98.45 E-value=3.1e-07 Score=83.30 Aligned_cols=62 Identities=21% Similarity=0.343 Sum_probs=53.0
Q ss_pred CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcC-CCeEEEEEEeCCCC
Q psy9827 219 NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS-KEKLSLTIRREVPR 284 (627)
Q Consensus 219 ~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~-~~~v~l~V~r~~~~ 284 (627)
.|++|..|.++ ++|..+||++||+|++|||+++.+++++++..+|+.. +..+.|+|.|++..
T Consensus 64 ~gv~V~~V~~~----spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~g~~ 126 (139)
T 2vz5_A 64 KGIYVTRVSEG----GPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVVRLLVTRQSLQ 126 (139)
T ss_dssp CCEEEEEECTT----SHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHCCTTCSEEEEEEEECC--
T ss_pred CCEEEEEECCC----CHHHHCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCEEEEEEEECCEE
Confidence 58999999887 4566678999999999999999999999999999974 56899999997654
No 342
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=97.82 E-value=2.3e-08 Score=87.29 Aligned_cols=78 Identities=21% Similarity=0.330 Sum_probs=59.1
Q ss_pred cEEEEEeecCCCCCeeeee--C----CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCC
Q psy9827 199 TLRVQLSKSRKKDDFGIIL--G----NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKE 272 (627)
Q Consensus 199 ~~~V~L~k~~~~~~~gi~~--~----~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~ 272 (627)
...|.|.+.. ..+||+.+ + .+++|..|.+++ +|+++++|++||+|++|||.++.+++++++..+++..++
T Consensus 28 ~~~v~l~k~~-~~glG~~l~~g~~~~~gv~V~~V~~~s---pA~~~aGL~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~ 103 (112)
T 2lob_A 28 IRKVLLLKED-HEGLGISITGGKEHGVPILISEIHPGQ---PADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRG 103 (112)
Confidence 3456666643 23555554 3 379999999873 344448999999999999999998899999999998877
Q ss_pred eEEEEEEe
Q psy9827 273 KLSLTIRR 280 (627)
Q Consensus 273 ~v~l~V~r 280 (627)
.++|+|.+
T Consensus 104 ~v~l~V~~ 111 (112)
T 2lob_A 104 EIEFEVVY 111 (112)
Confidence 78887753
No 343
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.44 E-value=3.8e-07 Score=78.30 Aligned_cols=77 Identities=26% Similarity=0.309 Sum_probs=60.0
Q ss_pred ccEEEEEeecC-CCCCeeeee-----------CCcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHH
Q psy9827 198 QTLRVQLSKSR-KKDDFGIIL-----------GNKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARK 265 (627)
Q Consensus 198 ~~~~V~L~k~~-~~~~~gi~~-----------~~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~ 265 (627)
.+..+.+.+.. .+.||.+.. ..+++|..|.++ ++|..+||++||+|++|||+++.+++++++..
T Consensus 15 ~~~~v~l~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~----spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~ 90 (104)
T 2z17_A 15 QRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQED----SPAHCAGLQAGDVLANINGVSTEGFTYKQVVD 90 (104)
T ss_dssp CCCEEEEECCTTSCCSEEEEECCCCCCSSSCCSCCEEEEEECTT----SHHHHHTCCTTCBCCEETTEECTTCCHHHHHH
T ss_pred cceEEEEEeCCCCCccEEEEeeecccCCcccCCCCeEEEEECCC----ChHHHcCCCCCCEEEEECCEEcCCCCHHHHHH
Confidence 44566677653 344555554 138999999887 45556779999999999999999999999999
Q ss_pred HHHcCCCeEEEEE
Q psy9827 266 LIDSSKEKLSLTI 278 (627)
Q Consensus 266 ~l~~~~~~v~l~V 278 (627)
+|+..++.++|+|
T Consensus 91 ~l~~~~~~v~l~v 103 (104)
T 2z17_A 91 LIRSSGNLLTIET 103 (104)
T ss_dssp HHHHTTTEEEEEC
T ss_pred HHHhCCCcEEEEE
Confidence 9999877887765
No 344
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.44 E-value=7.6e-07 Score=79.06 Aligned_cols=71 Identities=21% Similarity=0.302 Sum_probs=57.0
Q ss_pred CCCCeeeeeC--CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHc--CCCeEEEEEEeCCC
Q psy9827 209 KKDDFGIILG--NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDS--SKEKLSLTIRREVP 283 (627)
Q Consensus 209 ~~~~~gi~~~--~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~--~~~~v~l~V~r~~~ 283 (627)
...+|.+..+ .|++|..|.++ ++|..+||++||+|++|||+++.+++++++..+|.. .+..+.|+|.|+..
T Consensus 39 ~~lG~~l~~~~~~gv~V~~V~~g----spA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 113 (124)
T 3tsv_A 39 DSVGLRLAGGNDVGIFVAGVLED----SPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKKD 113 (124)
T ss_dssp SCCCEEEEECTTSCEEEEEECTT----CHHHHTTCCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEEEEEEECHH
T ss_pred CceeEEEecCCCCCEEEEEECCC----CHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEECCc
Confidence 3444444432 48999999887 466677899999999999999998888999998884 66799999998643
No 345
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.43 E-value=4.1e-07 Score=76.35 Aligned_cols=76 Identities=22% Similarity=0.409 Sum_probs=56.4
Q ss_pred cEEEEEeecCC---CCCeeeeeC-----CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcC
Q psy9827 199 TLRVQLSKSRK---KDDFGIILG-----NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS 270 (627)
Q Consensus 199 ~~~V~L~k~~~---~~~~gi~~~-----~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~ 270 (627)
...|.+.|... +.||.+... .+++|..|.++ ++|..+||++||+|++|||+++.+++++++..++++
T Consensus 7 ~~~v~i~k~~~~~~~~Gf~v~~~~~~~~~g~~V~~V~~~----spA~~aGL~~GD~Il~vng~~v~~~~~~~l~~~l~~- 81 (94)
T 3kzd_A 7 THSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKET----GLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ- 81 (94)
T ss_dssp EEEEEEEC------CCSEEEEEECSSSSCEEEEEEECTT----SHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHS-
T ss_pred eeEEEEEeCCCCcCCcCEEEEecCCCCcCCeEEEEECCC----CHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhC-
Confidence 45667777653 344544431 37999999886 466678999999999999999999999999999985
Q ss_pred CCeEEEEEEe
Q psy9827 271 KEKLSLTIRR 280 (627)
Q Consensus 271 ~~~v~l~V~r 280 (627)
..++|+|..
T Consensus 82 -~~l~ltV~~ 90 (94)
T 3kzd_A 82 -PSLGLLVRT 90 (94)
T ss_dssp -SEEEEEEEE
T ss_pred -CeEEEEEEe
Confidence 456666654
No 346
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.42 E-value=6.7e-07 Score=74.43 Aligned_cols=79 Identities=25% Similarity=0.333 Sum_probs=59.9
Q ss_pred EEEEEeecC-CCCCeeeee---CCcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHc--CCCe
Q psy9827 200 LRVQLSKSR-KKDDFGIIL---GNKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDS--SKEK 273 (627)
Q Consensus 200 ~~V~L~k~~-~~~~~gi~~---~~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~--~~~~ 273 (627)
+.+.+.+.. ....+|+.. ..|++|..|.++ ++|..+||++||+|++|||+++.+.+++++..+++. .+..
T Consensus 5 ~~~~~~~~~~~~~~lG~~~~~~~~g~~V~~V~~~----spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~ 80 (90)
T 2eaq_A 5 MRISINQTPGKSLDFGFTIKWDIPGIFVASVEAG----SPAEFSQLQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGH 80 (90)
T ss_dssp EEEEEECCTTCSSCCSEEEEEETTEEEEEEECTT----SHHHHTTCCTTCEEEEETTEECCTTCHHHHHHHHHHHHHHTE
T ss_pred eEEEEEecCCCCCcccEEEEecCCCEEEEEECCC----ChHHHcCCCCCCEEEEECCEEccCCCHHHHHHHHHhcCCCCE
Confidence 344444432 222455544 358999999876 466678899999999999999966699999999985 4679
Q ss_pred EEEEEEeCC
Q psy9827 274 LSLTIRREV 282 (627)
Q Consensus 274 v~l~V~r~~ 282 (627)
+.|+|.|++
T Consensus 81 v~l~v~R~g 89 (90)
T 2eaq_A 81 LVMDVRRYG 89 (90)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEeCC
Confidence 999999864
No 347
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.41 E-value=2.1e-06 Score=74.80 Aligned_cols=81 Identities=23% Similarity=0.301 Sum_probs=61.3
Q ss_pred CCccEEEEEeec-CCCCCeeeeeC----CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcC
Q psy9827 196 EPQTLRVQLSKS-RKKDDFGIILG----NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS 270 (627)
Q Consensus 196 ~~~~~~V~L~k~-~~~~~~gi~~~----~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~ 270 (627)
.....+|.+.+. ..+.+|.+..+ .|++|..|.++ ++|..++|++||+|++|||+++.++++.++..+++..
T Consensus 13 ~~~~~~v~~~~~~~~~lG~~l~~~~~~~~gv~V~~V~~~----s~A~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~~ 88 (114)
T 1x5n_A 13 ENKEKKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPG----SLSAEVGLEIGDQIVEVNGVDFSNLDHKEAVNVLKSS 88 (114)
T ss_dssp CCSSEEEEECCCSSCCCCEEEEECCSSSCSEEEEEECTT----STTTTTTCCTTCEEEEETTEETTSCCTTHHHHHHHHC
T ss_pred CCCcEEEEEEEcCCCceeEEEeecCCCCCCEEEEEECCC----CHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 445567777554 33344444432 48999999887 3555678999999999999999998888899988876
Q ss_pred CCeEEEEEEeC
Q psy9827 271 KEKLSLTIRRE 281 (627)
Q Consensus 271 ~~~v~l~V~r~ 281 (627)
..+.|.|.|+
T Consensus 89 -~~v~l~v~r~ 98 (114)
T 1x5n_A 89 -RSLTISIVAA 98 (114)
T ss_dssp -SSEEEEECSS
T ss_pred -CeEEEEEEcC
Confidence 5899999886
No 348
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.41 E-value=9.4e-07 Score=76.79 Aligned_cols=81 Identities=19% Similarity=0.281 Sum_probs=62.7
Q ss_pred EEEEEeecC-CCCCeeeeeC---CcEEEEEeccCCCCCCCCCCCCC-CCCCEEEEeCceeCCCCCHHHHHHHHHcC-CCe
Q psy9827 200 LRVQLSKSR-KKDDFGIILG---NKIFVKEVTHRLDNNASPGTHQL-AEGDVLLKINNHPTDGMSVKEARKLIDSS-KEK 273 (627)
Q Consensus 200 ~~V~L~k~~-~~~~~gi~~~---~gi~V~~V~~g~~~~~~a~~~~L-~~GD~Il~VNg~~v~~~s~~e~~~~l~~~-~~~ 273 (627)
+.|.|.++. .+.||.+... .+++|..|.++ ++|..+|| ++||+|++|||.++.+++++++..+++.. +..
T Consensus 3 ~~v~l~~~~~~glG~~~~~~~~~~~~~V~~v~~~----spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~ 78 (112)
T 1qau_A 3 ISVRLFKRKVGGLGFLVKERVSKPPVIISDLIRG----GAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASET 78 (112)
T ss_dssp EEEEEECBTTTBTSEEEEECSSSSCEEEEEECTT----SHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHHSCSSS
T ss_pred EEEEEEcCCCCceeEEEEecCCCCCEEEEEeCCC----ChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCc
Confidence 567777753 3344444443 38999999887 45556677 99999999999999988899999999874 579
Q ss_pred EEEEEEeCCCC
Q psy9827 274 LSLTIRREVPR 284 (627)
Q Consensus 274 v~l~V~r~~~~ 284 (627)
+.|.|.|++..
T Consensus 79 v~l~v~R~g~~ 89 (112)
T 1qau_A 79 HVVLILRGPEG 89 (112)
T ss_dssp EEEEEEECCTT
T ss_pred EEEEEEeCCcc
Confidence 99999997653
No 349
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.40 E-value=2.9e-07 Score=76.88 Aligned_cols=65 Identities=22% Similarity=0.271 Sum_probs=50.1
Q ss_pred CEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEeCCcccceee
Q psy9827 73 GIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQNRRDEYEHVV 138 (627)
Q Consensus 73 gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r~~~~~~~~v 138 (627)
.++|..|.++|||+++||++||+|++|||.++.++.+...... ...++.+.|++.|++......+
T Consensus 5 ~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~-~~~g~~v~l~v~R~g~~~~~~v 69 (91)
T 2zpm_A 5 EPVLENVQPNSAASXAGLQAGDRIVXVDGQPLTQWVTFVMLVR-DNPGXSLALEIERQGSPLSLTL 69 (91)
T ss_dssp -CBCSEECTTSHHHHTTCCTTCEEEEETTEECCCHHHHHHHHH-HCTTCCEEEEEEETTEEEEEEE
T ss_pred CeEEEEECCCChHHhcCCCCCCEEEEECCeEcCCHHHHHHHHh-cCCCCeEEEEEEECCeEEEEEE
Confidence 3578899999999999999999999999999987754333222 2467899999998775544433
No 350
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus}
Probab=98.40 E-value=9.3e-07 Score=84.97 Aligned_cols=146 Identities=14% Similarity=0.132 Sum_probs=89.1
Q ss_pred CCceEEEeCcc---HHHHHHHHhhhC-CCCccc--------C-------CCCCCCCHHHHHHHHhcccc-----cCCcee
Q psy9827 453 FIRPVVLFGPV---ADLARDKLLKDF-PDKFSA--------P-------RKFNFILWATIKDTAMYQSS-----KEPGMY 508 (627)
Q Consensus 453 ~~RpvVl~Gp~---k~~l~~~Ll~~~-p~~f~~--------~-------~~~~Fvs~e~f~~~i~~~~~-----~~~~~Y 508 (627)
....|+|+||+ |+|+.+.|.... |+ +.. + ....|.+.+.|..++..+.. +.+++|
T Consensus 5 ~g~~i~l~G~~GsGKSTl~~~L~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (207)
T 2j41_A 5 KGLLIVLSGPSGVGKGTVRKRIFEDPSTS-YKYSISMTTRQMREGEVDGVDYFFKTRDAFEALIKDDQFIEYAEYVGNYY 83 (207)
T ss_dssp CCCEEEEECSTTSCHHHHHHHHHHCTTCC-EECCCCEECSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEETTEEE
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHhhCCC-eEEecccccCCCCCCccCCCceEEcCHHHHHHHHHcCCeEEEEeECCeec
Confidence 34689999999 999999998876 53 221 1 11147788888887655442 246666
Q ss_pred -----hHHhHHhCCCcEEEecC-Cce-eccccCCCCceeEEEEcCCCcccC-----CCC--CHHHHHHHHHHHHHHHHHh
Q psy9827 509 -----QGKDSMYQGKDSMYQGK-ESM-YQGKDSMYQGKDSMYQGKDSMYQG-----KDI--KKEVKIKLFEQSQKLEKVW 574 (627)
Q Consensus 509 -----~V~~v~~~gk~ciLdi~-~~l-~~~~~~~~P~~~vIFI~ppsl~~~-----~~~--~e~~~~~~~~~~~~~e~~~ 574 (627)
.+++++++|+.||+|+. ... ..+ ..+|-.++||+.||+.+.+ .|. ++++++++++.... +.++
T Consensus 84 g~~~~~i~~~l~~g~~vv~d~~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~Rl~~R~~~~~~~~~~rl~~~~~-~~~~ 160 (207)
T 2j41_A 84 GTPVQYVKDTMDEGHDVFLEIEVEGAKQVR--KKFPDALFIFLAPPSLEHLRERLVGRGTESDEKIQSRINEARK-EVEM 160 (207)
T ss_dssp EEEHHHHHHHHHTTCEEEEECCGGGHHHHH--HHCTTSEEEEEECCC---------------------------C-GGGG
T ss_pred CCCHHHHHHHHHcCCeEEEEECHHHHHHHH--HhcCCeEEEEEECCCHHHHHHHHHhcCCCCHHHHHHHHHHHHH-HHhc
Confidence 67888889999999998 322 221 2233222899998874332 232 23334444433321 2345
Q ss_pred cCcccEEEECCCHHHHHHHHHHHHHhhC
Q psy9827 575 SHVFTGTITLSGVDVWYRKTRELIEKQQ 602 (627)
Q Consensus 575 ~~~fd~vi~n~~l~~~~~~l~~~i~~~~ 602 (627)
...+|++|+|+++++++++|.+++....
T Consensus 161 ~~~~d~vI~n~~~e~~~~~i~~~l~~~~ 188 (207)
T 2j41_A 161 MNLYDYVVVNDEVELAKNRIQCIVEAEH 188 (207)
T ss_dssp GGGCSEEEECSSHHHHHHHHHHHHHHHH
T ss_pred cccCCEEEECCCHHHHHHHHHHHHHHhh
Confidence 5678999999999999999999998754
No 351
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.40 E-value=2.7e-07 Score=78.61 Aligned_cols=60 Identities=28% Similarity=0.380 Sum_probs=51.4
Q ss_pred cEEEEEeccCCCCCCCCCCC-CCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEEEEEEeCCCC
Q psy9827 220 KIFVKEVTHRLDNNASPGTH-QLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 284 (627)
Q Consensus 220 gi~V~~V~~g~~~~~~a~~~-~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~l~V~r~~~~ 284 (627)
+++|..|.++ ++|..+ +|++||+|++|||+++.++ +.++..+++..+..+.|+|.|+...
T Consensus 36 ~v~V~~V~~~----spA~~agGL~~GD~I~~ing~~v~~~-~~~~~~~~~~~~~~v~l~v~R~~~~ 96 (100)
T 2edp_A 36 PLTVSKIEDG----GKAALSQKMRTGDELVNINGTPLYGS-RQEALILIKGSFRILKLIVRRRNSG 96 (100)
T ss_dssp EEEECCCCTT----SHHHHHTSCCTTCEEEEETTEECCSC-SHHHHHHHHTCCSSCEEEEEECCCS
T ss_pred CeEEEEECCC----CHHHHcCCCCCCCEEEEECCEEccch-HHHHHHHHHhCCCeEEEEEEeCCCC
Confidence 6899999887 344455 9999999999999999976 8889999998888999999997653
No 352
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.38 E-value=8.4e-07 Score=77.54 Aligned_cols=80 Identities=21% Similarity=0.367 Sum_probs=61.8
Q ss_pred ccEEEEEeecCC---CCCeeeeeC-----CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHc
Q psy9827 198 QTLRVQLSKSRK---KDDFGIILG-----NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDS 269 (627)
Q Consensus 198 ~~~~V~L~k~~~---~~~~gi~~~-----~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~ 269 (627)
....+.|.|... +.||.+... .+++|..|.++ ++|..+||++||+|++|||+++.+++++++..+++.
T Consensus 15 ~~~~v~l~k~~~~~~~~G~~v~~~~~~~~~gv~V~~V~~~----spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~ 90 (114)
T 2d8i_A 15 VTQSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKET----GLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ 90 (114)
T ss_dssp EEEEEEEECSCTTTCCCCCEEEEEEETTEEEEEEEECCTT----SSHHHHTCCTTCCEEEESSCBGGGCCHHHHHHHHTS
T ss_pred ceEEEEEEeCCCCccccCEEEEecCcCCcCCEEEEEeCCC----CHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhC
Confidence 345677777654 344444431 37999999876 466677899999999999999998889999999985
Q ss_pred CCCeEEEEEEeCCC
Q psy9827 270 SKEKLSLTIRREVP 283 (627)
Q Consensus 270 ~~~~v~l~V~r~~~ 283 (627)
. .+.|+|.|...
T Consensus 91 ~--~v~l~v~R~p~ 102 (114)
T 2d8i_A 91 P--SLGLLVRTYPE 102 (114)
T ss_dssp S--EEEEEEEECCC
T ss_pred C--cEEEEEEECCC
Confidence 3 89999998654
No 353
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.35 E-value=2.1e-06 Score=82.19 Aligned_cols=57 Identities=23% Similarity=0.307 Sum_probs=51.5
Q ss_pred CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEEEEEEe
Q psy9827 219 NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRR 280 (627)
Q Consensus 219 ~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~l~V~r 280 (627)
.|++|..|.+++ +|.. +|++||+|++|||+++.++++.+++.+++..++.+.|.|.|
T Consensus 24 ~g~~V~~v~~~s----pA~~-gl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r 80 (195)
T 2qbw_A 24 DGIFVTRVQPEG----PASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVR 80 (195)
T ss_dssp CSEEEEEECTTS----TTTT-TCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEEE
T ss_pred CCEEEEEECCCC----hHHh-CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 389999999873 4445 89999999999999999999999999999998899999999
No 354
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.35 E-value=9.8e-07 Score=75.57 Aligned_cols=59 Identities=22% Similarity=0.370 Sum_probs=50.8
Q ss_pred CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcC-CCeEEEEEEeC
Q psy9827 219 NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS-KEKLSLTIRRE 281 (627)
Q Consensus 219 ~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~-~~~v~l~V~r~ 281 (627)
.|++|..|.++ ++|..+||++||+|++|||+++.+++++++...++.. +..+.|.|.|.
T Consensus 45 ~gv~V~~V~~~----spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~ 104 (104)
T 3sfj_A 45 KGIYVTRVSEG----GPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVVRLLVTRQ 104 (104)
T ss_dssp CSEEEEEECTT----SHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHTCTTCSEEEEEEEEC
T ss_pred CCEEEEEECCC----ChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEEEEEEcC
Confidence 47999999887 4566677999999999999999998999999999864 46899999873
No 355
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.33 E-value=1.5e-06 Score=73.54 Aligned_cols=66 Identities=20% Similarity=0.312 Sum_probs=54.7
Q ss_pred CCeeeee---CCcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHc---CCCeEEEEEEe
Q psy9827 211 DDFGIIL---GNKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDS---SKEKLSLTIRR 280 (627)
Q Consensus 211 ~~~gi~~---~~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~---~~~~v~l~V~r 280 (627)
.+||+.+ ..+.+|..|.+| ++|..+||++||+|++|||.++...+++|+...++. .++.+.|.|..
T Consensus 28 ~g~G~~l~~~~~~~~I~~V~~g----SpA~~AGL~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v~LLV~~ 99 (101)
T 3qik_A 28 EDYGFDIEEKNKAVVVKSVQRG----SLAEVAGLQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRPLRLLVAT 99 (101)
T ss_dssp SSSSEEEEEETTEEEEEEECTT----SHHHHHTCCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CcccEEEEccCCCeEEEEECCC----CHHHHcCCCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeEEEEEec
Confidence 4455554 257899999886 577788999999999999999977799999999987 58899998864
No 356
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.29 E-value=1.3e-06 Score=94.35 Aligned_cols=79 Identities=22% Similarity=0.283 Sum_probs=63.9
Q ss_pred EEEEEeecCCCCCeeeeeC--CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHc--CCCeEE
Q psy9827 200 LRVQLSKSRKKDDFGIILG--NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDS--SKEKLS 275 (627)
Q Consensus 200 ~~V~L~k~~~~~~~gi~~~--~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~--~~~~v~ 275 (627)
..|.+.|+ .+.||.+.++ .|++|.+|.+|+ +|..+||++||+|++|||+++.++++++++.+|+. .++.++
T Consensus 3 r~V~l~k~-~~lG~~i~gg~~~Gi~V~~V~~gs----pA~~aGL~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v~ 77 (468)
T 3shw_A 3 KLVKFRKG-DSVGLRLAGGNDVGIFVAGVLEDS----PAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVT 77 (468)
T ss_dssp EEEEEECC-SSCCEEEEEETTTEEEEEEECSSS----HHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEE
T ss_pred eEEEEecC-CccceEEEccCcCCEEEEEECCCC----HHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEE
Confidence 45667765 4455555543 589999999873 45557799999999999999999999999999998 678999
Q ss_pred EEEEeCCC
Q psy9827 276 LTIRREVP 283 (627)
Q Consensus 276 l~V~r~~~ 283 (627)
|+|.|++.
T Consensus 78 L~V~r~g~ 85 (468)
T 3shw_A 78 ILAQKKKD 85 (468)
T ss_dssp EEEEECHH
T ss_pred EEEEECCc
Confidence 99999643
No 357
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.28 E-value=1.5e-06 Score=77.41 Aligned_cols=84 Identities=19% Similarity=0.304 Sum_probs=65.2
Q ss_pred CccEEEEEeecC-CCCCeeeeeC---CcEEEEEeccCCCCCCCCCCCCC-CCCCEEEEeCceeCCCCCHHHHHHHHHcC-
Q psy9827 197 PQTLRVQLSKSR-KKDDFGIILG---NKIFVKEVTHRLDNNASPGTHQL-AEGDVLLKINNHPTDGMSVKEARKLIDSS- 270 (627)
Q Consensus 197 ~~~~~V~L~k~~-~~~~~gi~~~---~gi~V~~V~~g~~~~~~a~~~~L-~~GD~Il~VNg~~v~~~s~~e~~~~l~~~- 270 (627)
...+.|.+.++. .+.||.+... .+++|..|.++ ++|..+|| ++||+|++|||+++.+++++++..+|+..
T Consensus 7 ~~~~~v~l~~~~~~glG~~~~~~~~~~~~~V~~V~~~----spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 82 (127)
T 1b8q_A 7 PNVISVRLFKRKVGGLGFLVKERVSKPPVIISDLIRG----GAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIA 82 (127)
T ss_dssp CCSEEEEEECTTTSCCSCCEEECTTSSCEEECCCSSS----SSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHSCC
T ss_pred CceEEEEEEeCCCCcEeEEEEecCCCCCEEEEEeCCC----CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 356778888864 4444444443 38999999887 35555677 99999999999999988899999999975
Q ss_pred CCeEEEEEEeCCCC
Q psy9827 271 KEKLSLTIRREVPR 284 (627)
Q Consensus 271 ~~~v~l~V~r~~~~ 284 (627)
+..+.|.|.|++..
T Consensus 83 g~~v~l~v~R~g~~ 96 (127)
T 1b8q_A 83 SETHVVLILRGPEG 96 (127)
T ss_dssp SSCEEEEEECCCCS
T ss_pred CCeEEEEEEeCCce
Confidence 46899999997653
No 358
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.28 E-value=2.6e-06 Score=74.85 Aligned_cols=63 Identities=25% Similarity=0.407 Sum_probs=54.4
Q ss_pred CcEEEEEecc--CCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEEEEEEeCCCCC
Q psy9827 219 NKIFVKEVTH--RLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPRP 285 (627)
Q Consensus 219 ~gi~V~~V~~--g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~l~V~r~~~~~ 285 (627)
.+++|..|.+ + ++|..+||++||+|++|||+++.+++++++..+|+..+..+.|+|.|++...
T Consensus 44 ~gv~V~~V~~~~~----spA~~aGL~~GD~Il~Vng~~v~~~~~~dl~~~l~~~g~~v~l~v~R~g~~~ 108 (118)
T 2yub_A 44 TTVQVKEVNRMHI----SPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAIKQTSQTLQLLIEHDPVPQ 108 (118)
T ss_dssp CEEEEEECCTTTS----CTTHHHHCCTTCCEEEESSSBTTTSCHHHHHHHHHCCSSCEEEEEEECSSCC
T ss_pred CcEEEEEecCCCC----ChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHhCCCEEEEEEEECCEEE
Confidence 4899999987 6 4666789999999999999999988889999999987778999999976543
No 359
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.26 E-value=4.6e-07 Score=88.35 Aligned_cols=84 Identities=14% Similarity=0.201 Sum_probs=66.5
Q ss_pred CCccEEEEEeecCCCCCeeeeeCC---cEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCC
Q psy9827 196 EPQTLRVQLSKSRKKDDFGIILGN---KIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKE 272 (627)
Q Consensus 196 ~~~~~~V~L~k~~~~~~~gi~~~~---gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~ 272 (627)
...+..|.|.+...+.||.+..+. |++|..|.+| ++|..+||++||+|++|||+++.+++++++..+|+..+.
T Consensus 7 ~~~~r~v~l~k~~~glG~~l~~~~~~~gv~V~~V~~g----SpA~~aGL~~GD~Il~VNG~~V~~~s~~dl~~~l~~~g~ 82 (216)
T 2krg_A 7 MLRPRLCTMKKGPSGYGFNLHSDKSKPGQFIRSVDPD----SPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGD 82 (216)
T ss_dssp TCCCEEEEEECCSSSSCEEECCCSSSCSCBEEEECTT----SHHHHHTCCTTCBCCEETTEECTTCCTHHHHHHHHHHCS
T ss_pred ccceEEEEEEeCCCCceEEEEecCCCCCeEEEEeCCC----ChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCC
Confidence 345677888887655555554443 8999999887 455567799999999999999999999999999987777
Q ss_pred eE-EEEEEeCCC
Q psy9827 273 KL-SLTIRREVP 283 (627)
Q Consensus 273 ~v-~l~V~r~~~ 283 (627)
.+ .|+|.|++.
T Consensus 83 ~v~~l~V~R~g~ 94 (216)
T 2krg_A 83 ETKLLVVDRETD 94 (216)
T ss_dssp EEEEEECCHHHH
T ss_pred eEEEEEEEECCE
Confidence 88 888877553
No 360
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.25 E-value=5.8e-06 Score=73.66 Aligned_cols=61 Identities=26% Similarity=0.351 Sum_probs=52.2
Q ss_pred cEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEEEEEEeCCCCC
Q psy9827 220 KIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPRP 285 (627)
Q Consensus 220 gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~l~V~r~~~~~ 285 (627)
|++|..|.++ ++|..+||++||+|++|||+++.++++.+++..++.. ..+.|.|.|++...
T Consensus 47 gv~V~~V~~~----spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~v~l~v~R~g~~~ 107 (128)
T 1uf1_A 47 GIYITGVDPG----SEAEGSGLKVGDQILEVNGRSFLNILHDEAVRLLKSS-RHLILTVKDVGRLP 107 (128)
T ss_dssp CCEEEEECTT----CHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHTTC-SEEEEEEECCSCCS
T ss_pred CEEEEEECCC----CHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC-CeEEEEEEECCccc
Confidence 8999999876 4566778999999999999999998888888888774 69999999977643
No 361
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.23 E-value=1.2e-06 Score=77.83 Aligned_cols=78 Identities=24% Similarity=0.411 Sum_probs=60.6
Q ss_pred EEEEeecCCCCCeeeeeC--------CcEEEEEeccCCCCCCCCCCCC-CCCCCEEEEeCceeCCCCCHHHHHHHHHcC-
Q psy9827 201 RVQLSKSRKKDDFGIILG--------NKIFVKEVTHRLDNNASPGTHQ-LAEGDVLLKINNHPTDGMSVKEARKLIDSS- 270 (627)
Q Consensus 201 ~V~L~k~~~~~~~gi~~~--------~gi~V~~V~~g~~~~~~a~~~~-L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~- 270 (627)
.+.+.+.....++|+.+. .|++|..|.++ ++|..+| |++||+|++|||+++. ++.++..+|+..
T Consensus 22 ~~~~~~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~----spA~~aG~l~~GD~I~~ing~~v~--~~~~~~~~l~~~~ 95 (124)
T 1wh1_A 22 EVDLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPN----SIAAKDGRIREGDRIIQINGIEVQ--NREEAVALLTSEE 95 (124)
T ss_dssp CBCCCCSSTTCCCCEEEECCCCCSSCCCEEEEEECSS----SHHHHTCCCCTTCEEEEESSCBCC--SHHHHHHHHTCSS
T ss_pred EEEEEecCCCCcccEEEEecCCCCCCCCEEEEEECCC----CHHHHcCCCCCCCEEEEECCEECC--CHHHHHHHHHhCC
Confidence 444555444345666552 47999999886 4556677 9999999999999999 899999999875
Q ss_pred CCeEEEEEEeCCCC
Q psy9827 271 KEKLSLTIRREVPR 284 (627)
Q Consensus 271 ~~~v~l~V~r~~~~ 284 (627)
+..+.|+|.|++..
T Consensus 96 g~~v~l~v~R~g~~ 109 (124)
T 1wh1_A 96 NKNFSLLIARPELQ 109 (124)
T ss_dssp CCSCCEEEEECSSC
T ss_pred CCEEEEEEEECCEE
Confidence 56899999997654
No 362
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.22 E-value=6.3e-06 Score=76.87 Aligned_cols=72 Identities=24% Similarity=0.370 Sum_probs=60.3
Q ss_pred eEEEecc--CCceeEEEEccCCCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEE
Q psy9827 52 RFITFQK--EGSVGIRLTGGNKVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQ 128 (627)
Q Consensus 52 r~v~l~k--~g~lG~~i~g~~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~ 128 (627)
+.+.+.+ .+.|||++. .| +|..|.++|||+++||++||+|++|||.++.++.+..+...+.+.+..+.+.+.
T Consensus 90 ~~v~l~~~~~~~lG~~~~----~g-~v~~v~~~s~a~~aGl~~GD~I~~ing~~v~~~~~~~v~~~v~r~g~~~~l~v~ 163 (166)
T 1w9e_A 90 RTITMHKDSTGHVGFIFK----NG-KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIM 163 (166)
T ss_dssp EEEEEECCTTSCCSEEEE----TT-EEEEECTTSHHHHTTCCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEE
T ss_pred EEEEEecCCCCcEeEEEe----CC-EEEEEccCCHHHHcCCCCCCEEEEECCEECCCCChHHHHHHHhhCCCEEEEEEE
Confidence 4444443 246888887 24 899999999999999999999999999999999999988888888888888765
No 363
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.21 E-value=2.6e-06 Score=75.65 Aligned_cols=62 Identities=31% Similarity=0.431 Sum_probs=49.6
Q ss_pred cCCCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEeCCc
Q psy9827 69 GNKVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQNRRD 132 (627)
Q Consensus 69 ~~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r~~~ 132 (627)
....|++|..|.++|||+++ |++||+|++|||.++.++.+..........++.+.|+| |++.
T Consensus 22 ~~~~gv~V~~V~~~spA~~a-L~~GD~Il~InG~~v~~~~dl~~~l~~~~~g~~v~l~V-R~g~ 83 (125)
T 2hga_A 22 HQPDGVQIDSVVPGSPASKV-LTPGLVIESINGMPTSNLTTYSAALKTISVGEVINITT-DQGT 83 (125)
T ss_dssp -CCCCEEEEEECSSSGGGGT-SCTTCEEEEETTEECSSHHHHHHHHTTCCTTCEEEEEE-TTEE
T ss_pred CCCCceEEEEECCCChHHHh-cCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEE-ECCE
Confidence 34568999999999999999 99999999999999998755443322225688999999 7665
No 364
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.18 E-value=2.9e-06 Score=95.04 Aligned_cols=79 Identities=18% Similarity=0.209 Sum_probs=61.3
Q ss_pred CceeEEEEccCCCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEeCCcccceeee
Q psy9827 60 GSVGIRLTGGNKVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQNRRDEYEHVVA 139 (627)
Q Consensus 60 g~lG~~i~g~~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r~~~~~~~~v~ 139 (627)
.+||+.+... ..|++|..|.+||||+++||++||+|++|||..+. .............|+.|.|+|.|++......+.
T Consensus 485 ~~lG~~~~~~-~~gv~V~~V~~~spA~~AGL~~GD~I~aInG~~v~-~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 562 (597)
T 4fgm_A 485 VNFGAKYKAS-PQGLDVLNVYHDESAYHAGLSAGDKIIAIDHLQAT-EQSVKRILERYIPGDTVTIHAFRRDELMTLELT 562 (597)
T ss_dssp CCCSEEEEEE-TTEEEEEEECTTSHHHHHTCCTTCEEEEETTEECC-TTTHHHHHTTCCTTCEEEEEEEETTEEEEEEEE
T ss_pred cccceEEecc-CCeEEEEEeCCCChHHHCCCCCCCEEEEECCEECC-HHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEE
Confidence 4799988764 34799999999999999999999999999999994 433332222225789999999998876655554
Q ss_pred c
Q psy9827 140 S 140 (627)
Q Consensus 140 ~ 140 (627)
.
T Consensus 563 l 563 (597)
T 4fgm_A 563 W 563 (597)
T ss_dssp C
T ss_pred e
Confidence 3
No 365
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.14 E-value=5e-06 Score=88.45 Aligned_cols=80 Identities=21% Similarity=0.287 Sum_probs=63.0
Q ss_pred cEEEEEeecCCCCCeeeeeC--CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHc--CCCeE
Q psy9827 199 TLRVQLSKSRKKDDFGIILG--NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDS--SKEKL 274 (627)
Q Consensus 199 ~~~V~L~k~~~~~~~gi~~~--~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~--~~~~v 274 (627)
...|.+.++. +.|+.+.++ .|++|..|.+| ++|..+||++||+|++|||.++.++++++++.+|+. .+..+
T Consensus 10 ~~~v~~~k~~-~lG~~i~gg~~~gi~V~~V~~g----spA~~aGL~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~v 84 (391)
T 3tsz_A 10 MKLVKFRKGD-SVGLRLAGGNDVGIFVAGVLED----SPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEV 84 (391)
T ss_dssp EEEEEEECCS-SCCEEEEEETTTEEEEEEECTT----CHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEE
T ss_pred cEEEEeecCC-ceeEEEEecCCCCEEEEEECCC----CHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhhcCCCeE
Confidence 3445555543 455555543 58999999987 455667799999999999999999999999999995 67799
Q ss_pred EEEEEeCCC
Q psy9827 275 SLTIRREVP 283 (627)
Q Consensus 275 ~l~V~r~~~ 283 (627)
+|+|.|++.
T Consensus 85 ~l~v~r~~~ 93 (391)
T 3tsz_A 85 TILAQKKKD 93 (391)
T ss_dssp EEEEEECHH
T ss_pred EEEEeeCCc
Confidence 999999643
No 366
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.13 E-value=5.7e-06 Score=80.30 Aligned_cols=71 Identities=25% Similarity=0.334 Sum_probs=56.9
Q ss_pred CceeEEEEcc-----CCCCEEEEEeCCCChhhhcCCCC-CCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEeCCc
Q psy9827 60 GSVGIRLTGG-----NKVGIFVTAVQPGSPASLQGLQP-GDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQNRRD 132 (627)
Q Consensus 60 g~lG~~i~g~-----~~~gi~V~~V~~gspA~~aGL~~-GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r~~~ 132 (627)
+.||+++... ...|++|..|.++|||+++||++ ||+|++|||. +.++.+......- ..++.+.|+|.|+..
T Consensus 95 ~~lGi~~~~~~~~~~~~~Gv~V~~V~~~spA~~aGl~~~GD~I~~ing~-v~~~~~l~~~l~~-~~g~~v~l~v~r~~~ 171 (209)
T 3rle_A 95 GLLGVSIRFCSFDGANENVWHVLEVESNSPAALAGLRPHSDYIIGADTV-MNESEDLFSLIET-HEAKPLKLYVYNTDT 171 (209)
T ss_dssp SSSCEEEEEEECTTGGGSCEEEEEECTTSHHHHHTCCTTTEEEEEESSC-CCSSSCHHHHHHH-TTTSCEEEEEEETTT
T ss_pred CccceEEeecChhHccccceEEEEeCCCChHHHCCCCCCCCEEEECCCE-eCCHHHHHHHHHh-CCCCeEEEEEEECCc
Confidence 3689988742 23689999999999999999999 9999999998 8877665543332 368899999988654
No 367
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=98.09 E-value=3.4e-06 Score=89.91 Aligned_cols=69 Identities=23% Similarity=0.226 Sum_probs=56.2
Q ss_pred ceeEEEEccCC--C--CEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEeCCc
Q psy9827 61 SVGIRLTGGNK--V--GIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQNRRD 132 (627)
Q Consensus 61 ~lG~~i~g~~~--~--gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r~~~ 132 (627)
|+||++....+ . .++|..|.+||||++|||++||+|++|||.++.++. ...+++..+..|+|++.|.+.
T Consensus 75 G~~~~l~~~~~~~~~~~~~V~~V~~gsPA~~AGL~~GD~I~~InG~~v~~~~---~~~~l~~~g~~v~l~v~R~g~ 147 (403)
T 3k50_A 75 GFDYTLYKVLDNDTAYNALISYVVPGSPAEEAGLQRGHWIMMMNGDYITKKV---ESELLQGSTRQLQIGVYKEVV 147 (403)
T ss_dssp SEEEEEEECTTCSSCEEEEEEEECTTSHHHHTTCCTTCEEEEETTBCBCTTT---GGGGTSCSCEEEEEEEEEEEC
T ss_pred ceEEEEEEcCCCCcceeEEEEEeCCCChHHHcCCCCCCEEEEECCEEccchh---HHHHhhCCCCEEEEEEEeCCc
Confidence 78888776432 2 378999999999999999999999999999999885 334445578899999988654
No 368
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=97.99 E-value=4.5e-06 Score=69.73 Aligned_cols=57 Identities=21% Similarity=0.348 Sum_probs=47.5
Q ss_pred cEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcC--CCeEEEEEEeCCC
Q psy9827 220 KIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS--KEKLSLTIRREVP 283 (627)
Q Consensus 220 gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~--~~~v~l~V~r~~~ 283 (627)
|++|..|.++ ++|.. +|++||+|++|||.++. +.+++..+|... +..+.|+|.|++.
T Consensus 2 Gv~V~~V~~~----spA~~-GL~~GD~I~~InG~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~ 60 (91)
T 2kjp_A 2 GIYASSVVEN----MPAKG-KIEVGDKIISADGKNYQ--SAEKLIDYISSKKAGDKVTLKIEREEK 60 (91)
T ss_dssp CSSCCCCCCS----SCCSS-CCCSSCEEEEETTBCCS--SHHHHHHHHSSCCSSCEECEEEESSSC
T ss_pred ceEEEEECCC----ChHHH-cCCCCCEEEEECCEECC--CHHHHHHHHHcCCCCCEEEEEEEECCE
Confidence 5678888876 34445 79999999999999999 789999999875 6789999999764
No 369
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=97.97 E-value=9.8e-07 Score=93.96 Aligned_cols=65 Identities=20% Similarity=0.356 Sum_probs=0.0
Q ss_pred CceeEEEEccCCCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEe
Q psy9827 60 GSVGIRLTGGNKVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQN 129 (627)
Q Consensus 60 g~lG~~i~g~~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r 129 (627)
++|||++.++ +|..|.+||||+++||++||+|++|||.++.++++.+++..++..+..+.|+|..
T Consensus 308 ~~lG~~i~~g-----~I~~V~~gs~A~~aGL~~GD~Il~VNg~~v~~~s~~~~~~~l~~~~~~v~L~V~p 372 (388)
T 3suz_A 308 YQLGFSVQNG-----IICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQALSNSVGEIHMKTMP 372 (388)
T ss_dssp ----------------------------------------------------------------------
T ss_pred CccceEEecC-----EEEEeecCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEe
Confidence 3678876643 8999999999999999999999999999999999999999999888999988863
No 370
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=97.94 E-value=2.5e-05 Score=66.32 Aligned_cols=58 Identities=17% Similarity=0.317 Sum_probs=49.0
Q ss_pred CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHc--CCCeEEEEEEeCCC
Q psy9827 219 NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDS--SKEKLSLTIRREVP 283 (627)
Q Consensus 219 ~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~--~~~~v~l~V~r~~~ 283 (627)
.|++|..|.+++ +|.. ||++||+|++|||+++. +.+++...|.. .+..+.|+|.|++.
T Consensus 7 ~Gv~V~~V~~~s----pA~~-GL~~GD~I~~Ing~~v~--~~~dl~~~l~~~~~g~~v~l~v~R~g~ 66 (100)
T 3i18_A 7 DGVYVMSVKDDV----PAAD-VLHAGDLITEIDGNAFK--SSQEFIDYIHSKKVGDTVKINYKHGDK 66 (100)
T ss_dssp CCEEEEEECTTS----GGGG-TCCTTCEEEEETTBCCS--SHHHHHHHHHTSCTTCEEEEEEEETTE
T ss_pred CCEEEEEeCCCC----chHH-CCCCCCEEEEECCEECC--CHHHHHHHHHhCCCCCEEEEEEEECCE
Confidence 488999998873 4444 89999999999999999 88999999986 35789999999654
No 371
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=97.93 E-value=2e-05 Score=70.79 Aligned_cols=59 Identities=15% Similarity=0.264 Sum_probs=50.5
Q ss_pred CCcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcC--CCeEEEEEEeCCC
Q psy9827 218 GNKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS--KEKLSLTIRREVP 283 (627)
Q Consensus 218 ~~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~--~~~v~l~V~r~~~ 283 (627)
..|++|..|.++ ++|. +||++||+|++|||.++. +..++...+... +..+.|+|.|++.
T Consensus 56 ~~g~~V~~V~~~----spA~-aGL~~GD~I~~inG~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~ 116 (134)
T 2l97_A 56 TSGVIVRSVQSN----MPAN-GHLEKYDVITKVDDKEIA--SSTDLQSALYNHSIGDTIKITYYRNGK 116 (134)
T ss_dssp CSCEEEEECSTT----SGGG-TTSCSSCEEEEETTEECC--CHHHHHHHHHHSSTTCEEEEEEEETTE
T ss_pred CCCEEEEEECCC----CchH-HCCCCCCEEEEECCEEcC--CHHHHHHHHHhCCCCCEEEEEEEECCE
Confidence 368899999876 4666 899999999999999999 889999988874 6799999999754
No 372
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=97.89 E-value=1.8e-05 Score=66.38 Aligned_cols=58 Identities=16% Similarity=0.373 Sum_probs=48.5
Q ss_pred CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcC--CCeEEEEEEeCCC
Q psy9827 219 NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS--KEKLSLTIRREVP 283 (627)
Q Consensus 219 ~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~--~~~v~l~V~r~~~ 283 (627)
.|++|..|.+++ +|.. +|++||+|++|||.++. +..++..++... +..+.|.|.|++.
T Consensus 5 ~Gv~V~~V~~~s----pA~~-GL~~GD~Il~InG~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~ 64 (94)
T 2kl1_A 5 KGVYVMSVLPNM----PAAG-RLEAGDRIAAIDGQPIN--TSEQIVSYVREKQAGDRVRVTFIRDRK 64 (94)
T ss_dssp CCEECCCCCTTS----TTBT-TBCTTCEEEEETTBCCC--CHHHHHHHHHHSCTTCCEEEEEEETTE
T ss_pred CcEEEEEECCCC----hHHh-CCCCCCEEEEECCEECC--CHHHHHHHHHhCCCCCEEEEEEEECCE
Confidence 468899998773 4445 79999999999999999 789999999874 6799999999764
No 373
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B*
Probab=97.88 E-value=3.3e-06 Score=86.13 Aligned_cols=151 Identities=9% Similarity=-0.003 Sum_probs=89.2
Q ss_pred CCceEEEeCcc---HHHHHHHHhhhCCCCc-ccCCCCCCCCHHHHHHHHh-cccc---cCCcee------hHHhHHhCCC
Q psy9827 453 FIRPVVLFGPV---ADLARDKLLKDFPDKF-SAPRKFNFILWATIKDTAM-YQSS---KEPGMY------QGKDSMYQGK 518 (627)
Q Consensus 453 ~~RpvVl~Gp~---k~~l~~~Ll~~~p~~f-~~~~~~~Fvs~e~f~~~i~-~~~~---~~~~~Y------~V~~v~~~gk 518 (627)
..+.|||+||+ |+|+.++|.+.++..+ ....-.++.....|..+++ +++. +.+++| .|++.+++|+
T Consensus 32 ~~~livl~G~sGsGKSTla~~L~~~~~~~~~~Is~D~~R~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~v~~~l~~g~ 111 (287)
T 1gvn_B 32 SPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFKQQHPNFDELVKLYEKDVVKHVTPYSNRMTEAIISRLSDQGY 111 (287)
T ss_dssp SCEEEEEECCTTSCTHHHHHHHHHHTTTCCEEECTHHHHTTSTTHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHhCCCeEEEechHhHHhchhhHHHHHHccchhhhhhhHHHHHHHHHHHHHHHhcCC
Confidence 45789999999 9999999998875322 2111011111122333321 2221 124555 5677788999
Q ss_pred cEEEecC--Cc-----e--eccccCCCCceeEEEEcCCCcc-----cC-----------CCCCH-HHHHHHHHHHHH--H
Q psy9827 519 DSMYQGK--ES-----M--YQGKDSMYQGKDSMYQGKDSMY-----QG-----------KDIKK-EVKIKLFEQSQK--L 570 (627)
Q Consensus 519 ~ciLdi~--~~-----l--~~~~~~~~P~~~vIFI~ppsl~-----~~-----------~~~~e-~~~~~~~~~~~~--~ 570 (627)
.+|||++ .. + .++. .=+++.+++|+.||++. ++ .|.++ +....+..+... -
T Consensus 112 ~vIld~~~~~~~~~~~~~~~~~~-~g~~~~~i~~~~p~~~~~l~~~~Rl~~R~~~g~l~~R~~~~e~~~~i~~rl~~a~~ 190 (287)
T 1gvn_B 112 NLVIEGTGRTTDVPIQTATMLQA-KGYETKMYVMAVPKINSYLGTIERYETMYADDPMTARATPKQAHDIVVKNLPTNLE 190 (287)
T ss_dssp CEEECCCCCCSHHHHHHHHHHHT-TTCEEEEEEECCCHHHHHHHHHHHHHHHHHHCTTTCCCCCHHHHHHHHHHHHHHHH
T ss_pred eEEEECCCCCHHHHHHHHHHHHh-CCCcEEEEEEECCHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 9999999 21 1 1111 11454447888999843 22 24442 323334333332 2
Q ss_pred HHHhcCcccEEEECCCH--------HHHHHHHHHHHHhhCCC
Q psy9827 571 EKVWSHVFTGTITLSGV--------DVWYRKTRELIEKQQSS 604 (627)
Q Consensus 571 e~~~~~~fd~vi~n~~l--------~~~~~~l~~~i~~~~~~ 604 (627)
|......||++++||+. +.+...+.++|..+..+
T Consensus 191 el~~~~~~d~v~v~d~~g~~ly~~~~~~~~~~~~ii~~e~~r 232 (287)
T 1gvn_B 191 TLHKTGLFSDIRLYNREGVKLYSSLETPSISPKETLEKELNR 232 (287)
T ss_dssp HHHHHTCCSCEEEECTTCCEEEETTTCTTSCHHHHHHHHHSC
T ss_pred HHHcCCCCCeEEEEeCCCCEeeccCCCCCcCHHHHHHHHHcC
Confidence 44567889999999874 77778888888877654
No 374
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=97.84 E-value=3.5e-05 Score=83.31 Aligned_cols=65 Identities=29% Similarity=0.339 Sum_probs=54.2
Q ss_pred CCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEeCCcccceee
Q psy9827 72 VGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQNRRDEYEHVV 138 (627)
Q Consensus 72 ~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r~~~~~~~~v 138 (627)
.|++|..|.++|||+++||++||+|++|||.++.++ .+....++..+..+.|+|.|++..+....
T Consensus 363 ~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~--~~~~~~l~~~~~~v~l~v~R~g~~~~~~~ 427 (436)
T 4a8c_A 363 KGIKIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNSI--AEMRKVLAAKPAIIALQIVRGNESIYLLM 427 (436)
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCH--HHHHHHHHhCCCeEEEEEEECCEEEEEEE
Confidence 489999999999999999999999999999999876 44555666566799999999876655443
No 375
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=97.81 E-value=2.5e-05 Score=67.79 Aligned_cols=58 Identities=19% Similarity=0.375 Sum_probs=50.1
Q ss_pred CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEEEEEEeCCC
Q psy9827 219 NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 283 (627)
Q Consensus 219 ~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~l~V~r~~~ 283 (627)
.|++|..|.++ ++|..+||++||+|++|||+++. +.+++...++. +..+.|+|.|++.
T Consensus 35 ~gv~V~~V~~~----spA~~aGl~~GD~I~~ing~~v~--~~~~~~~~l~~-~~~v~l~v~R~g~ 92 (113)
T 2pzd_A 35 HGVLIHKVILG----SPAHRAGLRPGDVILAIGEQMVQ--NAEDVYEAVRT-QSQLAVQIRRGRE 92 (113)
T ss_dssp SCEEEEEEBTT----SHHHHHTCCTTCEEEEETTEECC--SHHHHHHHHHH-CSSEEEEEEETTE
T ss_pred CCeEEEEeCCC----ChHHHcCCCCCCEEEEECCEECC--CHHHHHHHHhC-CCeEEEEEEECCE
Confidence 47899999876 45667889999999999999998 88999999987 6789999999654
No 376
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=97.79 E-value=2.7e-05 Score=84.43 Aligned_cols=61 Identities=16% Similarity=0.285 Sum_probs=52.4
Q ss_pred CCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEeCCccc
Q psy9827 72 VGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQNRRDEY 134 (627)
Q Consensus 72 ~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r~~~~~ 134 (627)
.|++|..|.++|||+++||++||+|++|||.++.++ .+....++..+..+.|+|.|++..+
T Consensus 386 ~Gv~V~~V~~gspA~~aGL~~GD~I~~Vng~~v~~~--~~~~~~l~~~~~~v~l~v~R~g~~~ 446 (451)
T 3pv2_A 386 IGVQVVGASENSAGWRAGIRPGDIIISANKKPVTDV--KSLQTIAQEKKKELLVQVLRGPGSM 446 (451)
T ss_dssp EEEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSH--HHHHHHTTSSCSCEEEEEEETTEEE
T ss_pred CceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCH--HHHHHHHhcCCCeEEEEEEECCEEE
Confidence 478999999999999999999999999999999876 4555666677889999999876543
No 377
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=97.78 E-value=2.3e-05 Score=64.70 Aligned_cols=58 Identities=19% Similarity=0.191 Sum_probs=45.9
Q ss_pred cEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHc--CCCeEEEEEEeCCC
Q psy9827 220 KIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDS--SKEKLSLTIRREVP 283 (627)
Q Consensus 220 gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~--~~~~v~l~V~r~~~ 283 (627)
|+.|..+.++ ++|..+||++||+|++|||+++. +..++..++.. .++.+.|.|.|++.
T Consensus 20 G~~V~~~~~~----s~A~~aGl~~GD~I~~ing~~v~--~~~d~~~~~~~~~~g~~v~l~v~R~g~ 79 (87)
T 2i6v_A 20 GYRVSPGKDP----VLFESIGLQDGDMAVALNGLDLT--DPNVMNTLFQSMNEMTEMSLTVERDGQ 79 (87)
T ss_dssp EEEEEECSCH----HHHHHTTCCTTCEEEEETTEETT--CHHHHHHHHHTGGGCSEEEEEEEETTE
T ss_pred EEEEEeCCCC----CHHHHCCCCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEECCE
Confidence 4556665443 35567899999999999999999 89999988875 35689999999753
No 378
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=97.75 E-value=3.6e-05 Score=64.69 Aligned_cols=56 Identities=18% Similarity=0.173 Sum_probs=47.4
Q ss_pred EEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCC--CeEEEEEEeCCC
Q psy9827 222 FVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSK--EKLSLTIRREVP 283 (627)
Q Consensus 222 ~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~--~~v~l~V~r~~~ 283 (627)
+|..|.++ ++|..+||++||+|++|||+.+. +++++...|.... ..+.|+|.|++.
T Consensus 5 ~V~~V~~~----spA~~aGl~~GD~I~~ing~~v~--~~~d~~~~l~~~~~~~~v~l~v~R~g~ 62 (95)
T 3id1_A 5 VVGEIAAN----SIAAEAQIAPGTELKAVDGIETP--DWDAVRLQLVDKIGDESTTITVAPFGS 62 (95)
T ss_dssp BEEEECTT----SHHHHTTCCTTCEEEEETTEECS--SHHHHHHHHHHTTTCSEEEEEEECTTC
T ss_pred EEEeeCCC----CHHHHcCCCCCCEEEEECCEECC--CHHHHHHHHHHhcCCCcEEEEEEECCC
Confidence 57888776 56778899999999999999999 8999999887643 589999999763
No 379
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=97.66 E-value=4.3e-05 Score=66.22 Aligned_cols=58 Identities=24% Similarity=0.445 Sum_probs=48.8
Q ss_pred CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEEEEEEeCCC
Q psy9827 219 NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 283 (627)
Q Consensus 219 ~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~l~V~r~~~ 283 (627)
.|++|..|.++ ++|..+||++||+|++|||+++. +..++...+. .+..+.|.|.|++.
T Consensus 35 ~gv~V~~V~~~----spA~~aGl~~GD~I~~ing~~v~--~~~~~~~~l~-~g~~v~l~v~R~g~ 92 (112)
T 2p3w_A 35 SGIYVQEVAPN----SPSQRGGIQDGDIIVKVNGRPLV--DSSELQEAVL-TESPLLLEVRRGND 92 (112)
T ss_dssp SSEEEEEECTT----SHHHHHTCCTTCEEEEETTEECC--SHHHHHHHHH-HCSSEEEEEEETTE
T ss_pred CCeEEEEECCC----ChHHHCCCCCCCEEEEECCEECC--CHHHHHHHHh-CCCeEEEEEEECCE
Confidence 47899999876 45666789999999999999999 8899988885 46789999998653
No 380
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=97.64 E-value=4.1e-05 Score=63.53 Aligned_cols=57 Identities=18% Similarity=0.273 Sum_probs=47.0
Q ss_pred EEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcC-CCeEEEEEEeCCC
Q psy9827 221 IFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS-KEKLSLTIRREVP 283 (627)
Q Consensus 221 i~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~-~~~v~l~V~r~~~ 283 (627)
++|..|.++ ++|..+||++||+|++|||+++. +.+++...+... +..+.|+|.|++.
T Consensus 6 ~~V~~v~~~----spA~~aGl~~GD~I~~ing~~v~--~~~~~~~~l~~~~g~~v~l~v~R~g~ 63 (91)
T 2zpm_A 6 PVLENVQPN----SAASXAGLQAGDRIVXVDGQPLT--QWVTFVMLVRDNPGXSLALEIERQGS 63 (91)
T ss_dssp CBCSEECTT----SHHHHTTCCTTCEEEEETTEECC--CHHHHHHHHHHCTTCCEEEEEEETTE
T ss_pred eEEEEECCC----ChHHhcCCCCCCEEEEECCeEcC--CHHHHHHHHhcCCCCeEEEEEEECCe
Confidence 357788765 45666799999999999999999 889999998864 5689999998653
No 381
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=97.54 E-value=0.00031 Score=72.57 Aligned_cols=67 Identities=18% Similarity=0.261 Sum_probs=56.1
Q ss_pred CCeeeeeCCcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHc--CCCeEEEEEEeCCC
Q psy9827 211 DDFGIILGNKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDS--SKEKLSLTIRREVP 283 (627)
Q Consensus 211 ~~~gi~~~~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~--~~~~v~l~V~r~~~ 283 (627)
..||+....|++|..|.++ ++|..+||++||+|++|||+++. +..++..+|+. .+..+.|+|.|++.
T Consensus 236 ~~~g~~~~~g~~V~~V~~~----spA~~aGL~~GD~I~~ing~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~ 304 (318)
T 1te0_A 236 QGGGIDQLQGIVVNEVSPD----GPAANAGIQVNDLIISVDNKPAI--SALETMDQVAEIRPGSVIPVVVMRDDK 304 (318)
T ss_dssp SSSCSSSCCCEEEEEECTT----STTTTTCCCTTCCEEEETTEECC--CHHHHHHHHHTSCTTCEEEEEEESSSC
T ss_pred HhccCCCCCcEEEEEeCCC----ChHHHCCCCCCCEEEEECCEEcC--CHHHHHHHHHhcCCCCEEEEEEEECCE
Confidence 3455555578999999886 56677899999999999999999 88999999986 46799999999764
No 382
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.51 E-value=0.00012 Score=87.78 Aligned_cols=93 Identities=12% Similarity=0.006 Sum_probs=67.7
Q ss_pred ccCCCCCccccccCCCCceEEEeccCCceeEEEEccCCCCEEEEEeCCC--------ChhhhcC--CCCCCEEEEECCEe
Q psy9827 34 VQPGSPDLFSIFFVEPDPRFITFQKEGSVGIRLTGGNKVGIFVTAVQPG--------SPASLQG--LQPGDKILKVNDMD 103 (627)
Q Consensus 34 i~~~~~d~~~~~~~~~~~r~v~l~k~g~lG~~i~g~~~~gi~V~~V~~g--------spA~~aG--L~~GD~Il~VnG~~ 103 (627)
+....+|+|+.+ ...+.....-...+++|+.+... +.+++|..|.+| |||+++| |+ ||+|++|||.+
T Consensus 712 ~~~~l~d~ht~~-~~~~~~~~~~~~~~g~G~~~~~~-~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~ 788 (1045)
T 1k32_A 712 MQGEYRTSHSYE-MGGTFTDKDPFRSGRIACDFKLD-GDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGET 788 (1045)
T ss_dssp HHHTTCCSCCCE-ECCCCCSCCCCCCCBCSEEEEEE-TTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEE
T ss_pred HHHhcCCCcceE-ChhHhccccccccceecEEEEEe-CCEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEE
Confidence 345566888844 33332221111225899888764 457999999998 9999999 99 99999999999
Q ss_pred CCCCCHHHHHHHHh-cCCCeeEEEEEeCC
Q psy9827 104 MKGITREEAVLFLL-SLQDQIHLIVQNRR 131 (627)
Q Consensus 104 v~~~~~~~~~~~l~-~~g~~V~L~v~r~~ 131 (627)
+.++. ++..++. ..|..|.|+|.|.+
T Consensus 789 ~~~~~--~~~~~~~~~~g~~v~l~v~r~~ 815 (1045)
T 1k32_A 789 VGAGS--NIYRVLSEKAGTSARIRLSGKG 815 (1045)
T ss_dssp CBTTB--CHHHHHHTTTTSEEEEEEECSS
T ss_pred ccchh--hHHHhhcCCCCCEEEEEEECCC
Confidence 99886 3344444 67899999999876
No 383
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=97.51 E-value=6.8e-05 Score=64.20 Aligned_cols=47 Identities=21% Similarity=0.275 Sum_probs=39.3
Q ss_pred CCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHc--CCCeEEEEEEeCCC
Q psy9827 235 SPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDS--SKEKLSLTIRREVP 283 (627)
Q Consensus 235 ~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~--~~~~v~l~V~r~~~ 283 (627)
++..+||++||+|++|||+++. ++.++..++.. .++.+.|.|.|++.
T Consensus 49 ~A~~aGl~~GDvI~~ing~~v~--~~~d~~~~~~~~~~g~~v~l~v~R~g~ 97 (105)
T 2i4s_A 49 LFESIGLQDGDMAVALNGLDLT--DPNVMNTLFQSMNEMTEMSLTVERDGQ 97 (105)
T ss_dssp HHHHHTCCTTCEEEEETTEETT--STTHHHHHHHHHTTCSEEEEEEEETTE
T ss_pred HHHHcCCCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCeEEEEEEECCE
Confidence 4466899999999999999999 77888888874 46789999999753
No 384
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=97.48 E-value=0.0002 Score=63.40 Aligned_cols=57 Identities=18% Similarity=0.263 Sum_probs=47.9
Q ss_pred CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHc--CCCeEEEEEEeCCC
Q psy9827 219 NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDS--SKEKLSLTIRREVP 283 (627)
Q Consensus 219 ~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~--~~~~v~l~V~r~~~ 283 (627)
.|++|..|.++ ++|..+ |++||+|++|||.++. +.+++...+.. .+..+.|+| |++.
T Consensus 25 ~gv~V~~V~~~----spA~~a-L~~GD~Il~InG~~v~--~~~dl~~~l~~~~~g~~v~l~V-R~g~ 83 (125)
T 2hga_A 25 DGVQIDSVVPG----SPASKV-LTPGLVIESINGMPTS--NLTTYSAALKTISVGEVINITT-DQGT 83 (125)
T ss_dssp CCEEEEEECSS----SGGGGT-SCTTCEEEEETTEECS--SHHHHHHHHTTCCTTCEEEEEE-TTEE
T ss_pred CceEEEEECCC----ChHHHh-cCCCCEEEEECCEEcC--CHHHHHHHHHhcCCCCEEEEEE-ECCE
Confidence 57899999876 455567 9999999999999999 88999999884 467899999 8654
No 385
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=97.37 E-value=0.00015 Score=75.82 Aligned_cols=65 Identities=25% Similarity=0.388 Sum_probs=55.0
Q ss_pred eeeeeCCcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHc--CCCeEEEEEEeCCC
Q psy9827 213 FGIILGNKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDS--SKEKLSLTIRREVP 283 (627)
Q Consensus 213 ~gi~~~~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~--~~~~v~l~V~r~~~ 283 (627)
||+....|++|..|.++ ++|..+||++||+|++|||+++. +..++..++.. .+..+.|+|.|++.
T Consensus 257 ~gl~~~~G~~V~~V~~~----spA~~aGL~~GDvI~~ing~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~ 323 (345)
T 3stj_A 257 FNLDVQRGAFVSEVLPG----SGSAKAGVKAGDIITSLNGKPLN--SFAELRSRIATTEPGTKVKLGLLRNGK 323 (345)
T ss_dssp TTCSCCSSEEEEEECTT----SHHHHHTCCTTCEECEETTEECS--CHHHHHHHHHTSCTTCEEEEEEEETTE
T ss_pred cCCCCCceEEEEEeccC----ChHHHcCCCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEECCE
Confidence 44444468999999886 56677899999999999999999 89999999986 46799999999765
No 386
>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.34 E-value=0.00012 Score=58.59 Aligned_cols=59 Identities=8% Similarity=-0.030 Sum_probs=43.7
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCC--CCCCCCCCccccccc-CCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVP--RAGRSRNPLLDVSLS-QLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~--~~gl~~gdil~v~~~-~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...+++|+++| .+.+++..+|+ ++.|.+||+++| +. .++. .||+++. + .+.|++|+...
T Consensus 6 ~~~~~~Alydy---~~~~~~~~~~~~~eLsf~~Gd~i~v-~~~~~~~----gWw~g~~---~---g~~G~fP~~yv 67 (75)
T 2ege_A 6 SGKIMIAALDY---DPGDGQMGGQGKGRLALRAGDVVMV-YGPMDDQ----GFYYGEL---G---GHRGLVPAHLL 67 (75)
T ss_dssp CSEEEEESSCB---CTTTTCCCSSSCCBCCBCTTCEEEE-ESCCCTT----CEEEEES---S---SCEEEEETTTE
T ss_pred CCcEEEECCCC---CCCccccCCCCCCcceECCCCEEEE-eEccCCC----CEEEEEE---C---CcEEEEChHHe
Confidence 45689999999 66676777775 445569999999 64 3443 7999975 2 48999999753
No 387
>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A
Probab=97.25 E-value=0.00025 Score=56.84 Aligned_cols=57 Identities=14% Similarity=-0.008 Sum_probs=41.4
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...+++|+++| .+.++ .++.|.+||++.| +.+.|. .||.++..+.. .+.|++|+...
T Consensus 9 ~~~~~~alydy---~~~~~-----~eLsf~~Gd~i~v-~~~~~~----~Ww~g~~~~~~---g~~G~~P~~yv 65 (76)
T 2ed1_A 9 KVRRVKTIYDC---QADND-----DELTFIEGEVIIV-TGEEDQ----EWWIGHIEGQP---ERKGVFPVSFV 65 (76)
T ss_dssp CCEEEEESSCC---CCSSS-----SBCCCCSSCEEEE-SSCCSS----SEEEEEETTCT---TCEEEEEGGGE
T ss_pred CCeEEEECccC---CCCCc-----CCcCcCCCCEEEE-EEecCC----CEEEEEECCCC---CCEEEEehHHe
Confidence 46789999999 33322 2567889999999 665554 89999864433 48999999753
No 388
>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.25 E-value=0.00027 Score=56.64 Aligned_cols=60 Identities=17% Similarity=0.115 Sum_probs=44.5
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCC--CCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAG--RSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~g--l~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...+++|+++| .+.+++..||.+.. |.+||++.| +.+.|. ..||.++. + .+.|++|+...
T Consensus 6 ~~~~~~Al~dy---~~~~~~~~~~~~~eLsf~~Gd~i~v-~~~~~~---~gWw~g~~---~---g~~G~~P~~yv 67 (76)
T 2csi_A 6 SGRRMVALYDY---DPRESSPNVDVEAELTFCTGDIITV-FGEIDE---DGFYYGEL---N---GQKGLVPSNFL 67 (76)
T ss_dssp CSEEEECSSCC---CTTTTSCSSSTTTSCCCCTTCEEEE-ESSCCS---SSEEEEEE---T---TEEEEEEGGGC
T ss_pred CccEEEEcccC---CCCCcccCCCCCCcccCCCCCEEEE-eEecCC---CCeEEEEE---C---CcEEEEehHHE
Confidence 35689999999 66677777886544 559999999 665442 15999864 2 48999999754
No 389
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=97.16 E-value=0.001 Score=68.75 Aligned_cols=59 Identities=17% Similarity=0.229 Sum_probs=50.7
Q ss_pred CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHc--CCCeEEEEEEe-CCC
Q psy9827 219 NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDS--SKEKLSLTIRR-EVP 283 (627)
Q Consensus 219 ~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~--~~~~v~l~V~r-~~~ 283 (627)
.|++|..|.++ ++|..+||++||+|++|||+++. +..++...+.. .+..++|+|.| ++.
T Consensus 242 ~g~~V~~v~~~----spA~~aGl~~GD~I~~ing~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~~g~ 303 (324)
T 1y8t_A 242 LGAKIVEVVAG----GAAANAGVPKGVVVTKVDDRPIN--SADALVAAVRSKAPGATVALTFQDPSGG 303 (324)
T ss_dssp SSEEEEEECTT----STTTTTTCCTTCEEEEETTEECC--SHHHHHHHHHTSCTTCEEEEEEECSSCC
T ss_pred CceEEEEECCC----ChHHHcCCCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEECCCC
Confidence 57999999876 46667899999999999999999 88999999875 46789999999 653
No 390
>2rqv_A BUD emergence protein 1; BEM1P, SH3, CDC42P, cytoplasm, cytoskeleton, SH3 domain, SIG protein; NMR {Saccharomyces cerevisiae} PDB: 2rqw_A
Probab=97.11 E-value=0.0002 Score=61.56 Aligned_cols=58 Identities=12% Similarity=-0.035 Sum_probs=42.1
Q ss_pred CCceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 311 SQNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 311 ~~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
.+.+|++|+++| .+.++ -++.|.+||++.| +.++|. .||+++..+.. .+.|+||+...
T Consensus 3 ~~~~~~~Alydy---~a~~~-----~ELsf~~Gd~i~v-l~~~~~----~Ww~g~~~g~~---g~~G~fPsnYV 60 (108)
T 2rqv_A 3 LGSLYAIVLYDF---KAEKA-----DELTTYVGENLFI-CAHHNC----EWFIAKPIGRL---GGPGLVPVGFV 60 (108)
T ss_dssp CSCCCEEESSCC---CCCSS-----SBCCCCSSEEECC-CCEETT----TEEEECCSSSS---CCCEEEESTTC
T ss_pred CCCeEEEECCCc---CCCCC-----CcCCcCCCCEEEE-eEecCC----CEEEEEECCcc---CCeeEeecceE
Confidence 356889999999 33322 2567889999999 666554 89999774432 46799999754
No 391
>2lx7_A GAS-7, growth arrest-specific protein 7; structural genomics, northeast structural genomics consortiu target HR8574A, PSI-biology; NMR {Homo sapiens}
Probab=97.11 E-value=0.00035 Score=53.26 Aligned_cols=53 Identities=9% Similarity=-0.096 Sum_probs=37.9
Q ss_pred eeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 314 LYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 314 ~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
.++||+++| .+.+++ .++.|..||++.| +.+.|. .||.++.. + .+.|++|+..
T Consensus 4 ~~~rAlydy---~~~~~~----e~Ls~~~Gd~i~v-~~~~~~----~Ww~g~~~--~---G~~G~fP~ny 56 (60)
T 2lx7_A 4 ARCRTLYPF---SGERHG----QGLRFAAGELITL-LQVPDG----GWWEGEKE--D---GLRGWFPASY 56 (60)
T ss_dssp CEEEESCCC---CSCCCS----SCCCCCTTCEEEB-SCCCTT----SCEEEECT--T---SCEEEECGGG
T ss_pred CEEEECccc---CCCCCC----CCccCCCCCEEEE-eEecCC----CeEEEEeC--C---CCEEEEcHHH
Confidence 368999999 433221 1367889999999 766665 89999642 2 3789999974
No 392
>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A
Probab=97.07 E-value=0.0052 Score=58.81 Aligned_cols=145 Identities=12% Similarity=0.034 Sum_probs=89.3
Q ss_pred CCCceEEEeCcc---HHHHHHHHhhhCCCCccc-------CCC----C---CCCCHHHHHHHHhcccc-----cCC--ce
Q psy9827 452 GFIRPVVLFGPV---ADLARDKLLKDFPDKFSA-------PRK----F---NFILWATIKDTAMYQSS-----KEP--GM 507 (627)
Q Consensus 452 ~~~RpvVl~Gp~---k~~l~~~Ll~~~p~~f~~-------~~~----~---~Fvs~e~f~~~i~~~~~-----~~~--~~ 507 (627)
.....++|+||+ |+||.+.|....|..+.. +.. . .|.+...|..+...+.+ +.+ ++
T Consensus 18 ~~Gei~~l~GpnGsGKSTLl~~l~gl~~~i~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~l~~~~~~~~n~~~ 97 (207)
T 1znw_A 18 AVGRVVVLSGPSAVGKSTVVRCLRERIPNLHFSVSATTRAPRPGEVDGVDYHFIDPTRFQQLIDQGELLEWAEIHGGLHR 97 (207)
T ss_dssp -CCCEEEEECSTTSSHHHHHHHHHHHSTTCEECCCEESSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEEGGGTEE
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHhhCCceEEcccccccCCcccccCCCeeEecCHHHHHHHHhcCCceeehhhcCchhh
Confidence 456789999999 999999998776533221 111 1 36677778776543322 223 45
Q ss_pred e-----hHHhHHhCCCcEEEecC-Cce-eccccCCCCceeEEEEcCCCcccC-----CCC--CHHHHHHHHHHHHHHHHH
Q psy9827 508 Y-----QGKDSMYQGKDSMYQGK-ESM-YQGKDSMYQGKDSMYQGKDSMYQG-----KDI--KKEVKIKLFEQSQKLEKV 573 (627)
Q Consensus 508 Y-----~V~~v~~~gk~ciLdi~-~~l-~~~~~~~~P~~~vIFI~ppsl~~~-----~~~--~e~~~~~~~~~~~~~e~~ 573 (627)
| .+++.+++++.|+++++ ..+ ..+ ..+|-..++|+..|++..+ ... .+...++.+.+..+ +..
T Consensus 98 ~g~~~~~~~~~~~~~~~~~~~l~~~gl~~~~--~~~~~~lS~l~~~p~~~~LDep~~~l~~~~d~~~~~~l~~~l~-~l~ 174 (207)
T 1znw_A 98 SGTLAQPVRAAAATGVPVLIEVDLAGARAIK--KTMPEAVTVFLAPPSWQDLQARLIGRGTETADVIQRRLDTARI-ELA 174 (207)
T ss_dssp EEEEHHHHHHHHHHTCCEEEECCHHHHHHHH--HHCTTSEEEEEECSCHHHHHHHHHTTSCSCHHHHHHHHHHHHH-HHH
T ss_pred cCCcHHHHHHHHHcCCeEEEEeCHHHHHHHH--HhcCCcEEEEEECCCHHHHHHHHHhcCCCCHHHHHHHHHHHHH-HHh
Confidence 5 67788888999999988 333 211 2334222799999984332 221 23333333333322 222
Q ss_pred hcCcccEEEECCCHHHHHHHHHHHHH
Q psy9827 574 WSHVFTGTITLSGVDVWYRKTRELIE 599 (627)
Q Consensus 574 ~~~~fd~vi~n~~l~~~~~~l~~~i~ 599 (627)
..+.++.+++++|+++++.....++-
T Consensus 175 ~~~g~tvi~vtHdl~~~~~~~d~i~~ 200 (207)
T 1znw_A 175 AQGDFDKVVVNRRLESACAELVSLLV 200 (207)
T ss_dssp GGGGSSEEEECSSHHHHHHHHHHHHC
T ss_pred hhccCcEEEECCCHHHHHHHHHHHHH
Confidence 34568999999999999887777664
No 393
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=97.06 E-value=8.7e-05 Score=80.38 Aligned_cols=70 Identities=27% Similarity=0.403 Sum_probs=0.0
Q ss_pred eeEEEEcc-CCCCEEEEEeCCCChhhhcCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeeEEEEEeCCcc
Q psy9827 62 VGIRLTGG-NKVGIFVTAVQPGSPASLQGLQPGDKILKVNDMDMKGITREEAVLFLLSLQDQIHLIVQNRRDE 133 (627)
Q Consensus 62 lG~~i~g~-~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~g~~V~L~v~r~~~~ 133 (627)
+|+.+... ...|++|..|.++|||+++||++||+|++|||.++.++.+ ....++.....+.|+|.|++..
T Consensus 372 ~G~~l~~~~~~~gv~V~~V~~gspA~~aGL~~GDiI~~vng~~v~~~~~--l~~~l~~~~~~v~l~v~R~g~~ 442 (448)
T 1ky9_A 372 EGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAE--LRKVLDSKPSVLALNIQRGDST 442 (448)
T ss_dssp -------------------------------------------------------------------------
T ss_pred cceEeeccCCCCeEEEEEecCCCHHHHcCCCCCCEEEEECCEECCCHHH--HHHHHHcCCCeEEEEEEECCEE
Confidence 36655422 2357999999999999999999999999999999987654 3444554445888988886644
No 394
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=97.05 E-value=0.00052 Score=71.03 Aligned_cols=58 Identities=19% Similarity=0.375 Sum_probs=51.0
Q ss_pred CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEEEEEEeCCC
Q psy9827 219 NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 283 (627)
Q Consensus 219 ~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~l~V~r~~~ 283 (627)
.|++|..|.++ ++|..+||++||+|++|||+++. +.+++..+++. ++.+.|.|.|++.
T Consensus 256 ~gv~V~~V~~~----spA~~aGl~~GDvI~~ing~~v~--~~~~l~~~l~~-~~~v~l~v~R~g~ 313 (325)
T 1lcy_A 256 HGVLIHKVILG----SPAHRAGLRPGDVILAIGEQMVQ--NAEDVYEAVRT-QSQLAVQIRRGRE 313 (325)
T ss_dssp SCEEEEEECTT----SHHHHHTCCTTCEEEEETTEECC--SHHHHHHHHTT-CSSEEEEEEETTE
T ss_pred CCeEEEEeCcC----ChHHHCCCCCCCEEEEECCEEcC--CHHHHHHHHhC-CCeEEEEEEECCE
Confidence 58999999876 56677899999999999999999 89999999986 5789999999764
No 395
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=97.00 E-value=0.0012 Score=69.94 Aligned_cols=61 Identities=13% Similarity=0.304 Sum_probs=52.3
Q ss_pred CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHc-CCCeEEEEEEeCCC
Q psy9827 219 NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDS-SKEKLSLTIRREVP 283 (627)
Q Consensus 219 ~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~-~~~~v~l~V~r~~~ 283 (627)
.+++|..|.++ ++|..+||++||+|++|||+++.+++.+++..+|+. .+..++|+|.|++.
T Consensus 99 ~~~~V~~v~~~----spA~~aGl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~r~g~ 160 (388)
T 1fc6_A 99 KDVVVLTPAPG----GPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAPGA 160 (388)
T ss_dssp SCEEEEEECTT----SHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEEETTE
T ss_pred CcEEEEEeCCC----ChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEeCCC
Confidence 57999999886 466678899999999999999998888999999986 45689999998754
No 396
>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A
Probab=96.96 E-value=0.00029 Score=54.69 Aligned_cols=54 Identities=17% Similarity=-0.001 Sum_probs=38.5
Q ss_pred ceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 313 NLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 313 ~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
.+.+||+++| .+.++ -++.|..||++.| +.+.|. .||.+.... + .+.|++|+..
T Consensus 6 ~~~~~Alydy---~a~~~-----~ELs~~~Gd~i~v-~~~~~~----gWw~g~~~~-~---g~~G~~P~ny 59 (65)
T 2lj0_A 6 LFSYQALYSY---IPQND-----DELELRDGDIVDV-MEKCDD----GWFVGTSRR-T---KQFGTFPGNY 59 (65)
T ss_dssp SCEEEESSCB---CCSST-----TBCCBCTTCEEEE-EEECTT----SEEEEEETT-T---CCEEEEETTS
T ss_pred CEEEEEceeE---CCCCc-----CCcCCCCCCEEEE-eEeCCC----CEEEEEECC-C---CCEEEEehhH
Confidence 3458999999 33332 2567889999999 665554 799986543 2 3789999964
No 397
>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A
Probab=96.95 E-value=0.00043 Score=54.01 Aligned_cols=53 Identities=13% Similarity=0.075 Sum_probs=39.1
Q ss_pred ceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 313 NLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 313 ~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
..+++|+++| .+.++ .++.|.+||++.| +.+++ .||.++..+ .+.|+||+...
T Consensus 4 ~~~~~Alydy---~a~~~-----~ELsf~~Gd~i~v-l~~~~-----~Ww~~~~~~-----g~~G~~Psnyv 56 (67)
T 2b86_A 4 EVIVIAKWDY---TAQQD-----QELDIKKNERLWL-LDDSK-----TWWRVRNAA-----NRTGYVPSNYV 56 (67)
T ss_dssp CEEEEESSCB---CCSST-----TSCCBCTTCEEEE-EECSS-----SSCEEECTT-----SCEEECCCCSE
T ss_pred CeEEEEeeeE---CCCCC-----CccccCCCCEEEE-EecCC-----CeEEEEeCC-----CCEEEeChHHE
Confidence 5688999999 33322 3567789999999 66643 799997652 48999999754
No 398
>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1
Probab=96.92 E-value=0.00035 Score=54.17 Aligned_cols=54 Identities=13% Similarity=0.086 Sum_probs=39.2
Q ss_pred ceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 313 NLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 313 ~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
..+++|+++| .+.++ .++.|.+||++.| +.++|. .||.++..+ .+.|++|+...
T Consensus 3 ~~~~~Alydy---~~~~~-----~eLsf~~Gd~i~v-~~~~~~----~Ww~g~~~~-----g~~G~~P~~yv 56 (65)
T 1b07_A 3 AEYVRALFDF---NGNDE-----EDLPFKKGDILRI-RDKPEE----QWWNAEDSE-----GKRGMIPVPYV 56 (65)
T ss_dssp CCEEEESSCB---CCSST-----TBCCBCTTCEEEE-EECSSS----SEEEEECTT-----SCEEEEEGGGE
T ss_pred ceEEEECCcC---CCCCC-----CccCCcCCCEEEE-EEecCC----CeEEEEECC-----CCEEEEChHHE
Confidence 3578999999 33322 2567789999999 666554 899997542 48999999753
No 399
>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A
Probab=96.80 E-value=0.0011 Score=51.53 Aligned_cols=55 Identities=13% Similarity=-0.023 Sum_probs=39.4
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...+++|+++|.+ .+ ..++.|.+||++.| +.+.|. .||.++..+ .+.|++|+...
T Consensus 7 ~~~~~~al~dy~~---~~-----~~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~~~-----g~~G~~P~~yv 61 (67)
T 1aww_A 7 ELKKVVALYDYMP---MN-----ANDLQLRKGDEYFI-LEESNL----PWWRARDKN-----GQEGYIPSNYV 61 (67)
T ss_dssp CCCEEEBSSCCCC---SS-----SSSCCCCSSCEEEC-CCCCSS----SEECCBCTT-----SCBCCEETTTB
T ss_pred CCeEEEECccCCC---CC-----CCCccCCCCCEEEE-EEccCC----CcEEEEECC-----CCEEEEchHhE
Confidence 4567899999933 22 12567789999999 665554 799997542 47899999754
No 400
>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=96.78 E-value=0.00078 Score=53.90 Aligned_cols=60 Identities=13% Similarity=0.014 Sum_probs=40.7
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCcc---ceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQE---VQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~---~~~GlIPs~~~ 384 (627)
...+++|+++| .+.++ .++.|.+||++.| +..+|. .||.++....+++. ...|++|+...
T Consensus 6 ~~~~~~alydy---~~~~~-----~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~~~~~g~~~~~~~~G~~P~~yv 68 (77)
T 2d8j_A 6 SGQYFVALFDY---QARTA-----EDLSFRAGDKLQV-LDTSHE----GWWLARHLEKKGTGLGQQLQGYIPSNYV 68 (77)
T ss_dssp CCEEEEESSCB---CCSSS-----SBCCBCTTCCEEE-EECCSS----SEEEEEECSSCCSSCCCCSEEEEETTTE
T ss_pred CCCEEEEccCC---CCCCC-----CccCCCCCCEEEE-EECCCC----CeEEEEECCCCCcCcccCCceEECHHHe
Confidence 35689999999 33222 2567889999999 666554 89999876422311 23499999753
No 401
>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A
Probab=96.77 E-value=0.00055 Score=53.42 Aligned_cols=59 Identities=15% Similarity=-0.016 Sum_probs=41.1
Q ss_pred CCceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 311 SQNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 311 ~~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
....+++|+++|. +.++ .++.|.+||++.| +.+.|. .||.++..+. +...+.|++|+..
T Consensus 5 ~~~~~~~Alydy~---~~~~-----~eLsf~~Gd~i~v-~~~~~~----~Ww~g~~~~~-g~~~~~G~fP~~y 63 (68)
T 1tg0_A 5 EVPFKVVAQFPYK---SDYE-----DDLNFEKDQEIIV-TSVEDA----EWYFGEYQDS-NGDVIEGIFPKSF 63 (68)
T ss_dssp CSSEEEEESSCBC---CSCT-----TBCCBCTTCEEEE-EEECSS----SEEEEEEECT-TSCEEEEEEEGGG
T ss_pred CCCEEEEECeeEC---cCCc-----CCCCCCCCCEEEE-EEecCC----CeEEEEECCC-CCCCEEEEEchHH
Confidence 3456899999993 3221 3567889999999 665554 7999977542 2123789999974
No 402
>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A
Probab=96.75 E-value=0.0014 Score=52.47 Aligned_cols=55 Identities=9% Similarity=-0.045 Sum_probs=39.8
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...+++|+++| ...++ .++.|..||++.| +.++|. .||.++.. + .+.|++|+...
T Consensus 19 ~~~~~~alydy---~~~~~-----~eLs~~~Gd~i~v-~~~~~~----~Ww~~~~~--~---g~~G~~P~~yv 73 (77)
T 1awj_A 19 EETLVIALYDY---QTNDP-----QELALRCDEEYYL-LDSSEI----HWWRVQDK--N---GHEGYAPSSYL 73 (77)
T ss_dssp SSSCCCCCCCB---CCCCT-----TSCCBCSSSCCSC-CCTTSS----SBCCCCCS--S---SCCCCCBSTTC
T ss_pred CceEEEECccC---CCCCc-----CCcCCCCCCEEEE-EEecCC----CCEEEEEC--C---CCEEEEehHHE
Confidence 35678999999 33322 2567889999999 666654 79999752 2 47899999754
No 403
>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=96.66 E-value=0.0014 Score=51.18 Aligned_cols=55 Identities=11% Similarity=-0.109 Sum_probs=39.2
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...+++|+++| .+.++ .++.|.+||++.| +.++|. .||.++..+ ...|++|+...
T Consensus 6 ~~~~~~alydy---~~~~~-----~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~~~-----~~~G~~P~~yv 60 (69)
T 2eqi_A 6 SGRTVKALYDY---KAKRS-----DELTFCRGALIHN-VSKEPG----GWWKGDYGT-----RIQQYFPSNYV 60 (69)
T ss_dssp CCCEEEESSCB---CCCSS-----SCCCBCTTCEEES-CCCCSS----SCEEEEETT-----EEEEEECGGGE
T ss_pred CCcEEEECeeE---CCCCc-----CccCCCCCCEEEE-EEcCCC----CeEEEEECC-----CCEEEEchHHc
Confidence 45679999999 33322 2567789999999 666554 899997532 35699999753
No 404
>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=96.64 E-value=0.0016 Score=51.33 Aligned_cols=59 Identities=10% Similarity=-0.035 Sum_probs=39.7
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...+++|+++| .+.++ .++.|.+||++.| .+.+. .||.++....+|+....|++|+...
T Consensus 9 ~~~~~~alydy---~~~~~-----~eLs~~~Gd~i~v--~~~~~----~Ww~g~~~~~~g~~~~~G~~P~~yv 67 (72)
T 2kgt_A 9 LGPKYVGLWDF---KSRTD-----EELSFRAGDVFHV--ARKEE----QWWWATLLDEAGGAVAQGYVPHNYL 67 (72)
T ss_dssp CCCEEECCTTC---BCSST-----TSCBCCTTCCEEE--EEECS----SCEEEEEECTTSCEEEEEEECTTTS
T ss_pred CCcEEEEcccC---CCCCc-----CCcCCCCCCEEEE--eeCCC----CEEEEEEcCCCCCEeCCcEEcHhHE
Confidence 45689999999 33221 3567789999999 34333 7999987643343333499999753
No 405
>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens}
Probab=96.64 E-value=0.0012 Score=53.75 Aligned_cols=59 Identities=12% Similarity=-0.002 Sum_probs=41.4
Q ss_pred CceeeCCCCCC-CCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 312 QNLYVQPPTRG-GPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 312 ~~~yvra~~~y-~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
...+++|+++| .+.+ ..++.|..||++.| +.+.|. .||.++....+....+.|++|+..
T Consensus 17 ~~~~~~Alydy~~a~~--------~~eLsf~~GDiI~V-~~~~~~----gWw~G~~~~~~~~tg~~G~fPsny 76 (83)
T 2ke9_A 17 GSLKVRALKDFWNLHD--------PTALNVRAGDVITV-LEQHPD----GRWKGHIHESQRGTDRIGYFPPGI 76 (83)
T ss_dssp CCEEEEESSCBCCCSC--------TTBCCBCTTCEEEE-SCSSCS----SCEEEEECCSSTTSCCCEEECGGG
T ss_pred CCeEEEEccccCCCCC--------CCcccccCCCEEEE-EEecCC----CeEEEEECCCCCCCCCEEEechHH
Confidence 35689999999 3321 13567889999999 666654 799997553222235899999874
No 406
>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A
Probab=96.62 E-value=0.00099 Score=52.00 Aligned_cols=54 Identities=13% Similarity=0.042 Sum_probs=39.0
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...+++|+++| .+.++ .++.|..||++.| +..++ .||.++..+ .+.|++|+...
T Consensus 7 ~~~~~~alydy---~~~~~-----~eLs~~~Gd~i~v-~~~~~-----~Ww~~~~~~-----g~~G~~P~~yv 60 (68)
T 2k2m_A 7 ALKWVLCNYDF---QARNS-----SELSVKQRDVLEV-LDDSR-----KWWKVRDPA-----GQEGYVPYNIL 60 (68)
T ss_dssp CCCEEEESSCB---CCCSS-----SBCCBCTTCEEEE-EECSS-----SEEEEECTT-----SCCEEEEGGGE
T ss_pred CCEEEEECccC---CCCCC-----CcccCCCCCEEEE-EEcCC-----CeEEEEeCC-----CCEEEEEhhhE
Confidence 35678999999 33322 2567889999999 66553 799997642 37899999754
No 407
>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A
Probab=96.61 E-value=0.00076 Score=50.55 Aligned_cols=51 Identities=12% Similarity=0.072 Sum_probs=36.9
Q ss_pred eeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 315 YVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 315 yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
+++|+++|. +.+ ..++.|.+||++.| +...|. .||.++..+ .+.|++|+..
T Consensus 3 ~~~al~dy~---~~~-----~~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~~~-----g~~G~~P~~y 53 (57)
T 1cka_A 3 YVRALFDFN---GND-----EEDLPFKKGDILRI-RDKPEE----QWWNAEDSE-----GKRGMIPVPY 53 (57)
T ss_dssp EEEESSCBC---CSS-----TTBCCBCTTCEEEE-EECSSS----SEEEEECTT-----SCEEEEEGGG
T ss_pred EEEECCcCC---CCC-----CCCCCCCCCCEEEE-EEecCC----CcEEEEeCC-----CCEEEEeHHH
Confidence 678888883 322 12567889999999 665544 799997543 4889999974
No 408
>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=96.61 E-value=0.0015 Score=54.74 Aligned_cols=60 Identities=12% Similarity=0.017 Sum_probs=41.3
Q ss_pred CceeeCCCCCCCCCCCccCcCCC-CCCCCCCCCCcccccc-cCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNL-VPRAGRSRNPLLDVSL-SQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~-~~~~gl~~gdil~v~~-~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...+++|+++| .+.+++... .-++.|..||++.| + .++|. .||+++..+ .+.|++|+...
T Consensus 16 ~~~~~~Alydy---~~~~~~~~~~~~eLsf~~Gd~i~v-~~~~~~~----gWw~g~~~~-----g~~G~~Psnyv 77 (96)
T 1wie_A 16 KVHLCVARYSY---NPFDGPNENPEAELPLTAGKYLYV-YGDMDED----GFYEGELLD-----GQRGLVPSNFV 77 (96)
T ss_dssp CEEEEEESSCC---CGGGSSCSCTTTBCCCCTTCEEEE-ESSCCSS----SCCEEEETT-----CCBCBCCTTSE
T ss_pred CCcEEEECCcc---CCCcccCCCCCCeeeECCCCEEEE-eEecCCC----CEEEEEECC-----CCEEEEchHHE
Confidence 45689999999 544421111 23566779999999 6 54554 799997432 47899999754
No 409
>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.58 E-value=0.0013 Score=53.72 Aligned_cols=54 Identities=15% Similarity=0.041 Sum_probs=39.4
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccC--CCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQ--LDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~--~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...|++|+++| .+.++ .++.|.+||++.| +.+ .+. .||.++. + .+.|++|+...
T Consensus 7 ~~~~~~al~dy---~~~~~-----~eLsf~~Gd~i~v-~~~~~~~~----~Ww~g~~---~---g~~G~fP~~yv 62 (85)
T 2dlp_A 7 GSGYVIALRSY---ITDNC-----SLLSFHRGDLIKL-LPVATLEP----GWQFGSA---G---GRSGLFPADIV 62 (85)
T ss_dssp CCCEEEESSCB---CCSSS-----SBCCBCTTCEEEE-CCCSCCCT----TEEEEES---S---SCEEEEETTSE
T ss_pred CCEEEEECCCC---CccCc-----CCccCcCCCEEEE-EEccCCCC----CeEEEEE---C---CEEEEechHHe
Confidence 46789999999 33322 3567889999999 654 443 7999965 2 38999999753
No 410
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=96.57 E-value=0.0014 Score=68.57 Aligned_cols=59 Identities=14% Similarity=0.335 Sum_probs=50.8
Q ss_pred CcEEEEEeccCCCCCCCCCCCCCCC-----------CCEEEEeCceeCCCCCHHHHHHHHHc--CCCeEEEEEEeCCC
Q psy9827 219 NKIFVKEVTHRLDNNASPGTHQLAE-----------GDVLLKINNHPTDGMSVKEARKLIDS--SKEKLSLTIRREVP 283 (627)
Q Consensus 219 ~gi~V~~V~~g~~~~~~a~~~~L~~-----------GD~Il~VNg~~v~~~s~~e~~~~l~~--~~~~v~l~V~r~~~ 283 (627)
.|++|..|.++ ++|..+||++ ||+|++|||+++. +.+++...|.. .++.++|+|.|++.
T Consensus 251 ~Gv~V~~V~~~----spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v~--~~~dl~~~l~~~~~g~~v~l~v~R~g~ 322 (348)
T 3qo6_A 251 SGVLVLDAPPS----GPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVS--NGSDLYRILDQCKVGDEVTVEVLRGDH 322 (348)
T ss_dssp SSEEEEECCSS----SHHHHHTCCCCEECSSSCEECCCEECEETTBCCS--SSHHHHHHHTTCCTTCEEEEEEECSSS
T ss_pred ceEEEEEecCC----ChHHHcCCccccccccCCCCCCCEEEEECCEEeC--CHHHHHHHHHhCCCcCEEEEEEEECCE
Confidence 58999999876 5667788998 9999999999999 77999999965 35799999999764
No 411
>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens}
Probab=96.56 E-value=0.0015 Score=50.54 Aligned_cols=51 Identities=10% Similarity=-0.007 Sum_probs=37.2
Q ss_pred eeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 315 YVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 315 yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
+++|+++| .+.++ .++.|..||++.| +.+.+. .||.++. + .+.|++|+...
T Consensus 3 ~~~Alydy---~~~~~-----~eLs~~~Gd~i~v-~~~~~~----gWw~g~~---~---g~~G~fP~~yv 53 (65)
T 2fei_A 3 QCKVLFEY---IPQNE-----DELELKVGDIIDI-NEEVEE----GWWSGTL---N---NKLGLFPSNFV 53 (65)
T ss_dssp EEECSSCC---CCCST-----TBCCCCTTCEEEC-CCCSSS----SEEEEES---S---SCEEEEETTTS
T ss_pred EEEECccC---CcCCc-----CccCCCCCCEEEE-EEecCC----CEEEEEE---C---CcEEEecHHHE
Confidence 67899999 33322 2567889999999 665554 7999964 2 48999999753
No 412
>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.53 E-value=0.0017 Score=50.58 Aligned_cols=53 Identities=13% Similarity=-0.066 Sum_probs=38.4
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
...|++|+++| .+.++ .++.|.+||++.| +.+.|. .||.+.. + .+.|++|+..
T Consensus 6 ~~~~~~al~dy---~~~~~-----~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~---~---g~~G~~P~~y 58 (68)
T 2dmo_A 6 SGEAHRVLFGF---VPETK-----EELQVMPGNIVFV-LKKGND----NWATVMF---N---GQKGLVPCNY 58 (68)
T ss_dssp CSEEEEECSSC---CCCSS-----SSCCCCTTCEEEE-CEECSS----SCEEEEE---T---TEEEEECSTT
T ss_pred CCCEEEECcCC---CcCCc-----CCCCCCCCCEEEE-EEeCCC----CEEEEEe---C---CCEEEeehHH
Confidence 35689999999 33322 2567889999999 665554 7998843 2 4889999974
No 413
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=96.52 E-value=0.0004 Score=72.10 Aligned_cols=59 Identities=22% Similarity=0.381 Sum_probs=0.0
Q ss_pred CcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEEEEEEeCCCC
Q psy9827 219 NKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 284 (627)
Q Consensus 219 ~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~l~V~r~~~~ 284 (627)
.|++|..|.++ ++|..+||++||+|++|||+++. +.+++..+++. +..++|+|.|++..
T Consensus 254 ~g~~V~~v~~~----spA~~aGl~~GD~I~~ing~~v~--~~~~~~~~l~~-~~~v~l~v~R~g~~ 312 (332)
T 3num_A 254 SGAYIIEVIPD----TPAEAGGLKENDVIISINGQSVV--SANDVSDVIKR-ESTLNMVVRRGNED 312 (332)
T ss_dssp ------------------------------------------------------------------
T ss_pred CceEEEEeccC----CChHHcCCCCCCEEEEECCEECC--CHHHHHHHHhC-CCeEEEEEEECCEE
Confidence 58899999886 46677899999999999999998 78888888876 67899999997653
No 414
>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=96.49 E-value=0.0017 Score=49.55 Aligned_cols=52 Identities=15% Similarity=0.063 Sum_probs=37.9
Q ss_pred ceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 313 NLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 313 ~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
..+++|+++|.+ .++ .++.|.+||++.| +...|. .||.++. + .+.|++|+..
T Consensus 5 ~~~~~al~dy~~---~~~-----~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~---~---g~~G~~P~~y 56 (62)
T 1k4u_S 5 GSQVEALFSYEA---TQP-----EDLEFQEGDIILV-LSKVNE----EWLEGES---K---GKVGIFPKVF 56 (62)
T ss_dssp CEEEECCSCBCC---CSS-----SBCCBCSSCEEEE-EEESSS----SCEEEEC---S---SCEEEECGGG
T ss_pred CeEEEECCCCCc---CCC-----CCccCCCCCEEEE-EEeCCC----CEEEEEE---C---CcEEEEeHHH
Confidence 567899999933 221 2567889999999 665444 7999973 2 4889999874
No 415
>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A
Probab=96.48 E-value=0.0013 Score=50.22 Aligned_cols=54 Identities=24% Similarity=0.144 Sum_probs=39.0
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
+..+++|+++| .+.++ .++.|.+||++.| +.++| .||.++... + .+.|++|+..
T Consensus 5 ~~~~~~al~dy---~~~~~-----~eLs~~~Gd~i~v-~~~~~-----~Ww~g~~~~-~---g~~G~~P~~y 58 (62)
T 2iim_A 5 QDNLVIALHSY---EPSHD-----GDLGFEKGEQLRI-LEQSG-----EWWKAQSLT-T---GQEGFIPFNF 58 (62)
T ss_dssp TTCEEEESSCB---CCCST-----TBCCBCTTCEEEE-EECCS-----SEEEEEETT-T---CCEEEEEGGG
T ss_pred CCcEEEEcccC---CCCCC-----CCcCCCCCCEEEE-EEcCC-----CEEEEEECC-C---CCEEEEEHHH
Confidence 45688999999 33221 3567889999999 66654 699997642 2 4789999874
No 416
>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.47 E-value=0.002 Score=52.15 Aligned_cols=54 Identities=7% Similarity=-0.056 Sum_probs=39.5
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...+++|+++| .+.++ -++.|.+||++.| +.++|. .||.++.. .+.|++|+...
T Consensus 9 ~~~~~~al~dy---~~~~~-----~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~~------g~~G~~P~~yv 62 (81)
T 2ysq_A 9 SIVSAEAVWDH---VTMAN-----RELAFKAGDVIKV-LDASNK----DWWWGQID------DEEGWFPASFV 62 (81)
T ss_dssp CCEEEEESSCC---CCSSS-----SSCCCCTTCEEEE-EECCSS----SEEEEECS------SCEEEEEGGGE
T ss_pred CceEEEEeeeE---CCCCC-----CcCCCCCCCEEEE-EEEcCc----CEEEEEEC------CCEEEechHHE
Confidence 46789999999 33221 2567789999999 666554 89999752 37899999753
No 417
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=96.47 E-value=0.0021 Score=71.84 Aligned_cols=65 Identities=17% Similarity=0.308 Sum_probs=50.7
Q ss_pred Ceeeee---CCcEEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHc--CCCeEEEEEEeCCC
Q psy9827 212 DFGIIL---GNKIFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDS--SKEKLSLTIRREVP 283 (627)
Q Consensus 212 ~~gi~~---~~gi~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~--~~~~v~l~V~r~~~ 283 (627)
.+|+.. +.|++|..|.++ ++|..+||++||+|++|||..+. ..++..+++. .+..++|+|.|++.
T Consensus 486 ~lG~~~~~~~~gv~V~~V~~~----spA~~AGL~~GD~I~aInG~~v~---~~~l~~~l~~~~~g~~v~l~v~R~g~ 555 (597)
T 4fgm_A 486 NFGAKYKASPQGLDVLNVYHD----ESAYHAGLSAGDKIIAIDHLQAT---EQSVKRILERYIPGDTVTIHAFRRDE 555 (597)
T ss_dssp CCSEEEEEETTEEEEEEECTT----SHHHHHTCCTTCEEEEETTEECC---TTTHHHHHTTCCTTCEEEEEEEETTE
T ss_pred ccceEEeccCCeEEEEEeCCC----ChHHHCCCCCCCEEEEECCEECC---HHHHHHHHHhcCCCCEEEEEEEECCE
Confidence 456554 358999999876 56777899999999999999995 3455666664 56799999999764
No 418
>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.46 E-value=0.002 Score=51.36 Aligned_cols=56 Identities=16% Similarity=-0.027 Sum_probs=40.0
Q ss_pred ceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 313 NLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 313 ~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
..+++|+++| .+.+ .++.|..||++.| +.+++. .||+++..... ..+.|++|+...
T Consensus 10 ~~~~~alydy---~~~~------~eLs~~~Gd~i~v-l~~~~~----gWw~g~~~~~~--~g~~G~~P~~yv 65 (75)
T 2egc_A 10 KDVYVSIADY---EGDE------ETAGFQEGVSMEV-LERNPN----GWWYCQILDGV--KPFKGWVPSNYL 65 (75)
T ss_dssp CEEEEECSCB---CCCS------SSCCBCTTCEEEE-CEECTT----SEEEEEECCSS--SCEEEEEEGGGE
T ss_pred CeEEEECCCc---CCCC------CcCCCCCCCEEEE-EEcCCC----CeEEEEeCCCC--CCcEEEEehHHC
Confidence 4568899999 3321 2567889999999 666654 79999876432 148999999754
No 419
>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=96.45 E-value=0.0021 Score=51.71 Aligned_cols=58 Identities=17% Similarity=0.005 Sum_probs=39.6
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...+++|+++| .+.++ .++.|.+||++.| +.+.|......||.++. + .+.|++|+...
T Consensus 12 ~~~~~~Alydy---~~~~~-----~eLs~~~Gd~i~v-l~~~~~~~~~~Ww~g~~---~---g~~G~~P~~yv 69 (79)
T 1uhc_A 12 GNQVYFAVYTF---KARNP-----NELSVSANQKLKI-LEFKDVTGNTEWWLAEV---N---GKKGYVPSNYI 69 (79)
T ss_dssp SSCCEEESSCB---CCCSS-----SBCCBCTTCEEEE-EESCCTTSCTTEEEEES---S---SCEEEEEGGGE
T ss_pred CCeEEEECccC---CCCCC-----CccCCCCCCEEEE-EECCCCCCCCCeEEEEe---C---CCEEEEchHHe
Confidence 34578899999 33222 3567889999999 66654212237999963 2 37899999754
No 420
>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.45 E-value=0.0024 Score=50.18 Aligned_cols=55 Identities=11% Similarity=0.015 Sum_probs=38.7
Q ss_pred ceeeCCCCCCCCCCC-ccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 313 NLYVQPPTRGGPNNL-LEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 313 ~~yvra~~~y~~~~~-~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...++|+++| .+ .++ .++.|.+||++.| +.+.|. .||.++... + .+.|++|+...
T Consensus 7 ~~~~~Alydy---~~~~~~-----~eLsf~~Gd~i~v-~~~~~~----~W~~g~~~~-~---g~~G~~P~~yv 62 (71)
T 2gqi_A 7 GRRVRAILPY---TKVPDT-----DEISFLKGDMFIV-HNELED----GWMWVTNLR-T---DEQGLIVEDLV 62 (71)
T ss_dssp CCCEEESSCC---CCCTTS-----SCCCCCTTCBCCC-CEECSS----SCEEEECTT-T---CCEEEECTTSE
T ss_pred CCEEEECccc---CCCCCC-----CCCCCCCCCEEEE-EEecCC----CEEEEEECC-C---CCEEEeeHHHE
Confidence 4568899999 43 221 2567889999999 665554 799997432 2 47899999743
No 421
>2kym_A BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI, STE20P PRR, CDC42P-interacting, S signaling protein; NMR {Lodderomyces elongisporus}
Probab=96.44 E-value=0.00087 Score=58.76 Aligned_cols=56 Identities=14% Similarity=0.054 Sum_probs=40.9
Q ss_pred ceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 313 NLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 313 ~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
.+|++|+++| .+.++ .++.|..||++.| +.+.|. .||.++..+.+ .+.|++|+...
T Consensus 3 ~~~~~Alydy---~a~~~-----~ELsf~~Gd~i~v-l~~~~~----~Ww~g~~~~~~---g~~G~~P~nyv 58 (120)
T 2kym_A 3 PLFAVTLYEF---KAERD-----DELDVSPGENLSI-CAHYDY----EWFIAKPINRL---GGPGLVPVSYV 58 (120)
T ss_dssp CCEEEECSCB---CCCST-----TCCCBCTTCEEEE-EEEETT----TEEEEEESSSC---SCCCCEEGGGE
T ss_pred CEEEEEcccC---CCCCC-----CccCCCCCCEEEE-EEecCC----CEEEEEECCCC---CCEEEEchHHE
Confidence 4789999999 33322 3567889999999 666554 79999764444 37899999754
No 422
>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens}
Probab=96.44 E-value=0.0016 Score=50.82 Aligned_cols=54 Identities=15% Similarity=0.028 Sum_probs=39.3
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...+++|+++| .+.++ .++.|..||++.| +.+++ .||.++.. + .+.|++|+...
T Consensus 6 ~~~~~~alydy---~~~~~-----~eLs~~~Gd~i~v-~~~~~-----~Ww~~~~~--~---g~~G~~P~~yv 59 (68)
T 1wxt_A 6 SGLKMQVLYEF---EARNP-----RELTVVQGEKLEV-LDHSK-----RWWLVKNE--A---GRSGYIPSNIL 59 (68)
T ss_dssp CCEEEEESSCB---CCCSS-----SBCCBCTTCEEEE-EECSS-----SEEEEECT--T---SCEEEEEGGGE
T ss_pred CCeEEEECceE---CCCCc-----CcCCCCCCCEEEE-EEcCC-----CEEEEEEC--C---CCEEEEEhHHc
Confidence 45779999999 33222 3567889999999 66653 79999763 2 48899999753
No 423
>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}
Probab=96.41 E-value=0.0013 Score=51.23 Aligned_cols=55 Identities=11% Similarity=-0.014 Sum_probs=38.7
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
...++||+++| .+..++ ..++.|..||++.| +.+++. .||.+.. + .+.|++|+..
T Consensus 5 ~~~~~~alydy---~~~~~~---~~eLs~~~Gd~i~v-~~~~~~----gWw~g~~---~---g~~G~fP~~y 59 (67)
T 2eyx_A 5 GPIYARVIQKR---VPNAYD---KTALALEVGELVKV-TKINVS----GQWEGEC---N---GKRGHFPFTH 59 (67)
T ss_dssp CSCBEEECCCB---CCCTTC---SSBCCBCSSEEEEE-EEECTT----SEEEEEE---T---TEEEEEEGGG
T ss_pred CCEEEEEeEEE---CCCCCC---CCccccCCCCEEEE-EEecCC----CEEEEEE---C---CCEEEEehHh
Confidence 35689999999 332111 12667889999999 665554 7999944 2 4899999974
No 424
>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=96.40 E-value=0.0036 Score=49.87 Aligned_cols=55 Identities=13% Similarity=0.024 Sum_probs=40.0
Q ss_pred CCceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 311 SQNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 311 ~~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
....+++|+++| .+.++ .++.|.+||++.| +.+.+. .||.++. + .+.|++|+...
T Consensus 8 ~~~~~~~al~dy---~~~~~-----~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~---~---g~~G~~P~~yv 62 (76)
T 1ujy_A 8 SHQLIVKARFNF---KQTNE-----DELSVCKGDIIYV-TRVEEG----GWWEGTL---N---GRTGWFPSNYV 62 (76)
T ss_dssp CCCEEEECCSCB---CCSST-----TSCCBCSSCCEEE-SSCCSS----SCEEEEE---T---TEEEEECTTTS
T ss_pred CCCEEEEECccC---CcCCC-----CcccCCCCCEEEE-EEecCC----CEEEEEE---C---CCEEEechHHE
Confidence 346789999999 33221 3567889999999 665554 7999974 2 48999999754
No 425
>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.39 E-value=0.0019 Score=50.27 Aligned_cols=54 Identities=9% Similarity=-0.060 Sum_probs=39.1
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...+++|+++| .+.++ .++.|.+||++.| +...+. .||.++. + .+.|++|+...
T Consensus 6 ~~~~~~al~dy---~~~~~-----~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~---~---g~~G~~P~~yv 59 (68)
T 1x2k_A 6 SGKVFRALYTF---EPRTP-----DELYFEEGDIIYI-TDMSDT----NWWKGTS---K---GRTGLIPSNYV 59 (68)
T ss_dssp CSEEEEESSCC---CCCST-----TBCCCCSSCEEEE-EECSCS----SEEEEES---S---SCEEEEETTTE
T ss_pred CcEEEEECceE---CCCCC-----CcccCCCCCEEEE-EEcCCC----CEEEEEE---C---CcEEEEehHHe
Confidence 45678999999 33221 3567889999999 555544 7999975 2 47999999753
No 426
>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A
Probab=96.38 E-value=0.0036 Score=49.15 Aligned_cols=54 Identities=7% Similarity=-0.095 Sum_probs=37.9
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCcccee-eeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQK-GIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~-GlIPs~~~ 384 (627)
...+++|+++| .+.++ .++.|..||++.| +.+.+. .||.++.. + .. |++|+...
T Consensus 5 ~~~~~~al~dy---~~~~~-----~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~~---g---~~gG~~P~~yv 59 (71)
T 1hsq_A 5 FKCAVKALFDY---KAQRE-----DELTFIKSAIIQN-VEKQEG----GWWRGDYG---G---KKQLWFPSNYV 59 (71)
T ss_dssp SSSCCCCSSCC---CCSSS-----SSCCCCTTCCCBS-CCCBTT----TEECCBCS---S---SCSCCEETTTC
T ss_pred CCeEEEECCCC---CcCCC-----CccCCCCCCEEEE-EEecCC----CEEEEEEC---C---eEEeEEChHHc
Confidence 35678999999 33322 2567889999999 666554 79999762 2 34 59999754
No 427
>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.35 E-value=0.0039 Score=51.26 Aligned_cols=54 Identities=15% Similarity=0.033 Sum_probs=39.7
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...+++|+++| .+.++ .++.|.+||++.| +.+.|. .||.++.. ...|++|+...
T Consensus 16 ~~~~~~Alydy---~~~~~-----~eLsf~~Gd~i~v-~~~~~~----~Ww~g~~~------g~~G~~P~~yv 69 (88)
T 1x2q_A 16 VARKVRALYDF---EAVED-----NELTFKHGEIIIV-LDDSDA----NWWKGENH------RGIGLFPSNFV 69 (88)
T ss_dssp CCEEEEESSCC---CCCSS-----SCCCCCSSCEEEE-EECSCS----SSEEEEET------TEEEEECGGGE
T ss_pred CCeEEEEcccC---CCCCc-----CccCCCCCCEEEE-EEeCCC----CEEEEEEC------CcEEEEehHHE
Confidence 45689999999 33322 3567889999999 665554 79999763 36899999754
No 428
>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A
Probab=96.35 E-value=0.0015 Score=50.10 Aligned_cols=53 Identities=13% Similarity=0.016 Sum_probs=38.7
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
...+++|+++|.+ .+ ..++.|.+||++.| +...+. .||.++. + .+.|++|+..
T Consensus 5 ~~~~~~al~dy~~---~~-----~~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~---~---g~~G~~P~~y 57 (64)
T 2ak5_A 5 SQLVVRAKFNFQQ---TN-----EDELSFSKGDVIHV-TRVEEG----GWWEGTH---N---GRTGWFPSNY 57 (64)
T ss_dssp CCCEEEESSCBCC---CS-----TTBCCBCTTCEEEE-EECCTT----SEEEEEE---T---TEEEEEEGGG
T ss_pred CCEEEEEccccCC---cC-----cCcccCCCCCEEEE-eEecCC----CEEEEEE---C---CCEEEEehHH
Confidence 4578999999933 22 13567889999999 555544 7999975 2 4899999874
No 429
>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A
Probab=96.34 E-value=0.0015 Score=49.01 Aligned_cols=51 Identities=20% Similarity=0.203 Sum_probs=37.1
Q ss_pred eeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 314 LYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 314 ~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
.+++|+++|.+ .++ .++.|.+||++.| +...+. .||.++. + .+.|++|+..
T Consensus 3 ~~~~al~dy~~---~~~-----~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~---~---g~~G~~P~~y 53 (58)
T 1sem_A 3 KFVQALFDFNP---QES-----GELAFKRGDVITL-INKDDP----NWWEGQL---N---NRRGIFPSNY 53 (58)
T ss_dssp CEEEESSCBCC---SST-----TBCCBCTTCEEEE-EECSSS----SEEEEEE---T---TEEEEEEGGG
T ss_pred eEEEECcCCCC---CCC-----CCcCCCCCCEEEE-EEecCC----CEEEEEE---C---CcEEEechHH
Confidence 46888999833 221 3567889999999 655544 7999976 2 4899999864
No 430
>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens}
Probab=96.34 E-value=0.0031 Score=49.71 Aligned_cols=54 Identities=11% Similarity=0.036 Sum_probs=39.1
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...+++|+++| .+.++ .++.|.+||++.| +..++ .||.++..+ .+.|++|+...
T Consensus 6 ~~~~~~alydy---~~~~~-----~eLs~~~Gd~i~v-~~~~~-----~Ww~g~~~~-----g~~G~~P~~yv 59 (72)
T 2jw4_A 6 EEVVVVAKFDY---VAQQE-----QELDIKKNERLWL-LDDSK-----SWWRVRNSM-----NKTGFVPSNYV 59 (72)
T ss_dssp CCEEEECSSCC---CCSST-----TSCCCCTTCEEEE-EECSS-----SSEEEECTT-----SCEEEECTTSC
T ss_pred CCeEEEECcCC---CcCCC-----CcccCCCCCEEEE-EECCC-----CEEEEEECC-----CCEEEEEhhHE
Confidence 35689999999 33221 3567889999999 65543 799997652 48899999754
No 431
>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.32 E-value=0.0022 Score=50.01 Aligned_cols=54 Identities=17% Similarity=0.087 Sum_probs=38.8
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...+++|+++| .+.+ ..++.|..||++.| +.+++ .||.++..+ .+.|++|+...
T Consensus 6 ~~~~~~alydy---~~~~-----~~eLs~~~Gd~i~v-~~~~~-----~Ww~~~~~~-----g~~G~~P~~yv 59 (68)
T 1wxb_A 6 SGKYVKILYDF---TARN-----ANELSVLKDEVLEV-LEDGR-----QWWKLRSRS-----GQAGYVPCNIL 59 (68)
T ss_dssp SCCCEECSSCB---CCSS-----SSBCCBCTTCEEEE-EECSS-----SEEEEECTT-----SCEEEEETTTC
T ss_pred CCEEEEECccC---CCCC-----CCccCCCCCCEEEE-EEcCC-----CEEEEEECC-----CCEEEEEHHHe
Confidence 34578999999 3322 13567889999999 66543 799997632 48899999753
No 432
>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A
Probab=96.30 E-value=0.0014 Score=49.70 Aligned_cols=51 Identities=12% Similarity=0.145 Sum_probs=36.4
Q ss_pred eeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 315 YVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 315 yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
+++|+++|. +.++ .++.|..||++.| +..++ .||.++..+ .+.|++|+...
T Consensus 3 ~~~al~dy~---~~~~-----~eLs~~~Gd~i~v-~~~~~-----~Ww~~~~~~-----g~~G~~P~~yv 53 (60)
T 1i07_A 3 YAKSKYDFV---ARNS-----SELSVMKDDVLEI-LDDRR-----QWWKVRNAS-----GDSGFVPNNIL 53 (60)
T ss_dssp EEEESSCBC---CSST-----TBCCBCTTCEEEE-CGGGC-----CEEEEECTT-----SCEEEEEGGGE
T ss_pred EEEECccCC---CCCC-----CcccCCCCCEEEE-EEcCC-----CeEEEEECC-----CCEEEEEHHHe
Confidence 678888883 3221 2567789999999 65533 799997543 48899999753
No 433
>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A
Probab=96.30 E-value=0.0015 Score=49.04 Aligned_cols=51 Identities=24% Similarity=0.217 Sum_probs=37.0
Q ss_pred eeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 314 LYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 314 ~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
.+++|+++|.+ .+ ..++.|.+||++.| +...+. .||.++. + .+.|++|+..
T Consensus 3 ~~~~al~dy~~---~~-----~~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~---~---g~~G~~P~~y 53 (58)
T 2vwf_A 3 TYVQALFDFDP---QE-----DGELGFRRGDFIHV-MDNSDP----NWWKGAC---H---GQTGMFPRNY 53 (58)
T ss_dssp CEEEESSCBCC---CS-----TTBCCBCTTCEEEE-EECCSS----SEEEEEE---T---TEEEEEEGGG
T ss_pred eEEEECceECC---CC-----cCCcCCCCCCEEEE-EEcCCC----CEEEEEE---C---CcEEEEchHH
Confidence 46788899833 22 13567889999999 555443 7999976 2 4899999864
No 434
>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1
Probab=96.29 E-value=0.0017 Score=49.56 Aligned_cols=53 Identities=17% Similarity=0.091 Sum_probs=38.1
Q ss_pred ceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 313 NLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 313 ~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
..+++|+++| .+.++ .++.|.+||++.| +...|. .||.++.. ...|++|+...
T Consensus 5 ~~~~~al~dy---~~~~~-----~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~~------g~~G~~P~~yv 57 (62)
T 1uj0_A 5 ARRVRALYDF---EAVED-----NELTFKHGELITV-LDDSDA----NWWQGENH------RGTGLFPSNFV 57 (62)
T ss_dssp CEEEEESSCB---CCCST-----TBCCBCTTCEEEE-EECCSS----SEEEEEET------TEEEEEEGGGE
T ss_pred CeEEEECccC---CCCCc-----CCcCCCCCCEEEE-EEeCCC----CEEEEEEC------CCEEEechhHE
Confidence 4678999999 33221 3567889999999 555544 79999753 36899999753
No 435
>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}
Probab=96.28 E-value=0.0015 Score=51.00 Aligned_cols=53 Identities=9% Similarity=-0.008 Sum_probs=38.3
Q ss_pred ceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 313 NLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 313 ~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
..+++|+++| .+.++ .++.|.+||++.| +...|. .||.++. + .+.|++|+...
T Consensus 3 ~~~~~Alydy---~~~~~-----~eLsf~~Gd~i~v-~~~~~~----~Ww~g~~---~---g~~G~~P~~yv 55 (68)
T 2ew3_A 3 QPCCRGLYDF---EPENQ-----GELGFKEGDIITL-TNQIDE----NWYEGMI---H---GESGFFPINYV 55 (68)
T ss_dssp CCEEEESSCB---CCCST-----TBCCBCTTCEEEE-EEESSS----SEEEEEE---T---TEEEEEEGGGE
T ss_pred CCEEEEeeeE---CCCCC-----CccCCCCCCEEEE-EEecCC----CEEEEEE---C---CcEEEeeHHHE
Confidence 3578899999 33222 2567889999999 665554 7999975 2 48999999754
No 436
>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*
Probab=96.28 E-value=0.0019 Score=50.96 Aligned_cols=56 Identities=11% Similarity=-0.009 Sum_probs=40.1
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...+++|+++|. +.+ ..++.|.+||++.| +.+.|. .||.++... + .+.|++|+...
T Consensus 14 ~~~~~~al~dy~---~~~-----~~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~~~-~---g~~G~~P~~yv 69 (73)
T 3h0h_A 14 GVTLFVALYDYE---AIT-----EDDLSFHKGEKFQI-LNSSEG----DWWEARSLT-T---GETGYIPSNYV 69 (73)
T ss_dssp TTCEEEESSCBC---CSS-----TTBCCBCTTCEEEE-EECSSS----SEEEEEETT-T---CCEEEEEGGGE
T ss_pred CCEEEEECccCC---CCC-----CCcceEeCCCEEEE-EEecCC----CeEEEEECC-C---CCEEEEEHHHe
Confidence 356788999993 322 23567889999999 665554 799998752 2 37899998753
No 437
>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.26 E-value=0.00092 Score=56.23 Aligned_cols=58 Identities=10% Similarity=-0.031 Sum_probs=40.4
Q ss_pred ceeeCCCCCCCCCCCccCcCCCC---CCCCCCCCCcccccccC-CCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 313 NLYVQPPTRGGPNNLLEDKSNLV---PRAGRSRNPLLDVSLSQ-LDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 313 ~~yvra~~~y~~~~~~~d~~~~~---~~~gl~~gdil~v~~~~-~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
..+++|+++| .+..++..+| .++.|.+||++.| +.+ ++. .||+++. + .+.|+||+...
T Consensus 17 ~~~~~Alydy---~~~~~~~~~~~~~~eLsf~~Gd~i~v-l~~~~~~----gWw~g~~---~---g~~G~~P~~yv 78 (97)
T 2csq_A 17 ARIFVALFDY---DPLTMSPNPDAAEEELPFKEGQIIKV-YGDKDAD----GFYRGET---C---ARLGLIPCNMV 78 (97)
T ss_dssp CEEEECSSCB---CTTTTSSCHHHHTTBCCBCTTCEEEE-EEEECTT----CEEEEEE---T---TEEEEEETTTS
T ss_pred ceEEEEcccc---CCCcccccCCCCCCccCCCCCCEEEE-EEecCCC----CeEEEEE---C---CcEEEEehHHe
Confidence 4578999999 5543333322 3567779999999 643 332 5999976 2 48999999754
No 438
>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}
Probab=96.25 E-value=0.0031 Score=49.22 Aligned_cols=54 Identities=11% Similarity=0.020 Sum_probs=38.6
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
..-+++|+++| .+.++ .++.|..||++.| +.+.+. .||.++.. .+.|++|+...
T Consensus 7 ~~~~~~al~dy---~~~~~-----~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~~------g~~G~~P~~yv 60 (69)
T 2dil_A 7 GAQEYRALYDY---TAQNP-----DELDLSAGDILEV-ILEGED----GWWTVERN------GQRGFVPGSYL 60 (69)
T ss_dssp CCCEEECCSCB---CCSSS-----SSCCBCTTCEEEE-EECCSS----SEEEEEET------TEEEEEEGGGC
T ss_pred CCcEEEECccC---CccCc-----CccCCCCCCEEEE-EECCCC----CEEEEEEC------CCEEEEehHHe
Confidence 34578899999 33221 3567889999999 655443 79999762 48999999753
No 439
>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A
Probab=96.25 E-value=0.0028 Score=50.18 Aligned_cols=53 Identities=11% Similarity=-0.051 Sum_probs=37.1
Q ss_pred eeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 314 LYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 314 ~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
.++||+++|.+. +.+ .-++.|..||++.| +.+.|. .||.++. + .+.|++|+..
T Consensus 10 ~~~~alydy~~~-~~~-----~~eLs~~~Gd~i~v-~~~~~~----gWw~g~~---~---g~~G~fP~~y 62 (73)
T 2ebp_A 10 GRARVHTDFTPS-PYD-----TDSLKLKKGDIIDI-ISKPPM----GTWMGLL---N---NKVGTFKFIY 62 (73)
T ss_dssp EEEEECSCBCCC-TTC-----CSBCCBCSSCEEEE-EECCSS----SCEEEEC---S---SCEEEECSTT
T ss_pred eEEEEeeccCCC-CCC-----CCccCCCCCCEEEE-EEeCCC----CeEEEEE---C---CCEEEEeHHH
Confidence 478999999331 001 13567889999999 666554 7999954 2 3789999974
No 440
>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.24 E-value=0.0027 Score=49.47 Aligned_cols=53 Identities=8% Similarity=-0.091 Sum_probs=38.3
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
...+++|+++| .+.+ ..++.|.+||++.| +.+.|. .||.++. + .+.|++|+..
T Consensus 6 ~~~~~~al~dy---~~~~-----~~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~---~---g~~G~~P~~y 58 (68)
T 2dl4_A 6 SGNTYVALYKF---VPQE-----NEDLEMRPGDIITL-LEDSNE----DWWKGKI---Q---DRIGFFPANF 58 (68)
T ss_dssp CCCEEEESSCC---CCSS-----TTBCCCCTTCEEEE-EECCCS----SEEEEEC---S---SCEEEEETTT
T ss_pred CCCEEEEeeeE---CCCC-----cCCcCCCCCCEEEE-EEeCCC----CEEEEEE---C---CcEEEEehHH
Confidence 34578899999 3322 13567889999999 665544 7999974 2 3799999974
No 441
>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.21 E-value=0.0038 Score=48.94 Aligned_cols=54 Identities=9% Similarity=-0.069 Sum_probs=38.8
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...+++|+++| .+.++ .++.|..||++.| +.+++. .||.++.. .+.|++|+...
T Consensus 7 ~~~~~~al~dy---~~~~~-----~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~~------g~~G~~P~~yv 60 (71)
T 2dnu_A 7 GEEKYVTVQPY---TSQSK-----DEIGFEKGVTVEV-IRKNLE----GWWYIRYL------GKEGWAPASYL 60 (71)
T ss_dssp CSEEEECSSCB---CCSST-----TBCCBCTTCEEEE-CCCCSS----SEEEEEET------TEEEEEEGGGC
T ss_pred CCCEEEECCcc---CCCCC-----CCCcCCCCCEEEE-eECCCC----CeEEEEEC------CcEEEEEHHHe
Confidence 34568899999 33221 3567789999999 665544 79999764 37899999754
No 442
>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=96.21 E-value=0.0037 Score=49.30 Aligned_cols=53 Identities=11% Similarity=0.004 Sum_probs=37.5
Q ss_pred ceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCccccccc-CCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 313 NLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLS-QLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 313 ~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~-~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
..+++|+++| .+.++ .++.|.+||++.| +. ..|. .||.++. + .+.|++|+...
T Consensus 10 ~~~~~alydy---~~~~~-----~eLsf~~Gd~i~v-~~~~~~~----~Ww~g~~---~---g~~G~~P~~yv 63 (72)
T 1ugv_A 10 FRKAKALYAC---KAEHD-----SELSFTAGTVFDN-VHPSQEP----GWLEGTL---N---GKTGLIPENYV 63 (72)
T ss_dssp CCCEEESSCB---CCCSS-----SBCCBCTTCEEBS-CCBCSST----TEEEEES---S---SCEEEEEGGGE
T ss_pred ccEEEEcccc---CCcCC-----CEeCCcCCCEEEE-EEecCCC----CeEEEEE---C---CcEEEecHHHE
Confidence 4579999999 33322 3567889999998 54 2333 7999963 2 47899999743
No 443
>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.21 E-value=0.0019 Score=52.76 Aligned_cols=55 Identities=11% Similarity=0.000 Sum_probs=40.0
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...+++|+++| .+.++ .++.|.+||++.| +.++|. .||.++..+ .+.|+||+...
T Consensus 18 ~~~~~~alydy---~~~~~-----~eLs~~~Gd~i~v-~~~~~~----~Ww~~~~~~-----g~~G~~P~~yv 72 (85)
T 2yuq_A 18 EETVVIALYDY---QTNDP-----QELALRRNEEYCL-LDSSEI----HWWRVQDRN-----GHEGYVPSSYL 72 (85)
T ss_dssp SSCEEEESSCC---CCSCS-----SBCCCCBTEEEEE-EECCSS----SEEEEECSS-----SCEEEEETTTC
T ss_pred CCeEEEECcCC---CCCCC-----CcCCCCCCCEEEE-EEecCC----CeEEEEECC-----CCEEEEehHHe
Confidence 35688999999 33322 2567889999999 666554 799997532 38899999754
No 444
>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens}
Probab=96.20 E-value=0.002 Score=50.41 Aligned_cols=56 Identities=13% Similarity=-0.003 Sum_probs=39.6
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...+++|+++|.+ .++ .++.|.+||++.| +.+.|. .||.++..+ . .+.|++|+...
T Consensus 6 ~~~~~~al~dy~~---~~~-----~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~~~-~---g~~G~~P~~yv 61 (70)
T 2ecz_A 6 SGGEAIAKFNFNG---DTQ-----VEMSFRKGERITL-LRQVDE----NWYEGRIPG-T---SRQGIFPITYV 61 (70)
T ss_dssp CCBCEEESSCCCC---CST-----TBCCCCTTCBCEE-EEEEET----TEEEEEETT-T---TEEEEECTTTE
T ss_pred CCCEEEECccCCC---CCc-----CCcCCCCCCEEEE-EEecCC----CeEEEEECC-C---CCEEEEchHHE
Confidence 3567899999933 221 2567889999999 555443 799997654 1 48999999743
No 445
>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1
Probab=96.20 E-value=0.0018 Score=50.30 Aligned_cols=53 Identities=15% Similarity=-0.068 Sum_probs=37.8
Q ss_pred eeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 314 LYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 314 ~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
.+++|+++| .+.+ ..++.|.+||++.| +.+.|. .||.++..+ .+.|++|+...
T Consensus 3 ~~~~al~dy---~~~~-----~~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~~~-----g~~G~~P~~yv 55 (67)
T 1gl5_A 3 EIVVAMYDF---QATE-----AHDLRLERGQEYII-LEKNDL----HWWRARDKY-----GSEGYIPSNYV 55 (67)
T ss_dssp SCEEECSCB---CCSS-----SSBCCBCTTCEEEE-EECSSS----SEEEEECSS-----SCEEEEETTSE
T ss_pred eEEEECccC---CCCC-----CCeecCCcCCEEEE-EEccCC----CcEEEEECC-----CCEEEEEhHhE
Confidence 357888888 3322 13567889999999 666554 899997542 37999999754
No 446
>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}
Probab=96.19 E-value=0.0019 Score=50.38 Aligned_cols=52 Identities=13% Similarity=0.058 Sum_probs=37.7
Q ss_pred ceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCC---CCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 313 NLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQL---DRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 313 ~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~---d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
.++++|+++| .+.++ .++.|.+||++.| +.+. +. .||.++. + .+.|++|+..
T Consensus 3 ~~~~~alydy---~~~~~-----~eLs~~~Gd~i~v-~~~~~~~~~----~Ww~g~~---~---g~~G~~P~~y 57 (69)
T 1wyx_A 3 NVLAKALYDN---VAESP-----DELSFRKGDIMTV-LEQDTQGLD----GWWLCSL---H---GRQGIVPGNR 57 (69)
T ss_dssp EEEEEESSCB---CCSST-----TBCCBCTTCEEEE-EETTGGGCT----TEEEEEE---T---TEEEEEEGGG
T ss_pred CEEEEECccC---CcCCC-----CccCCcCCCEEEE-eECCCCCCC----CcEEEEE---C---CcEEEechhh
Confidence 4678999999 33221 3567889999999 5554 33 7999974 2 4799999974
No 447
>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=96.19 E-value=0.004 Score=48.78 Aligned_cols=57 Identities=12% Similarity=0.031 Sum_probs=37.7
Q ss_pred eeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCC-CCCCcCccccccCCCCccceeeeccChh
Q psy9827 314 LYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDR-PVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 314 ~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~-~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
++.+|.++| .+.+.+ -++.|.+||++.| +.+.|. .....||+++..+ .+.|++|+..
T Consensus 8 ~~~~aly~y---~a~~~~----dELsf~~Gd~i~V-l~~~~~~~~~~gWW~g~~~~-----G~~G~~Psny 65 (69)
T 1nm7_A 8 HFARALYDF---VPENPE----MEVALKKGDLMAI-LSKKDPLGRDSDWWKVRTKN-----GNIGYIPYNY 65 (69)
T ss_dssp -CEEECSCC---CCSSTT----SCCCCCTTCEEEE-CCSSSSSCCSSSCEEEEETT-----TEEEEECGGG
T ss_pred eEEEEEecc---cCCCCC----CccCCCCCCEEEE-EecCCCCCCCCCeeEEEeCC-----CCEEEecHHH
Confidence 567888888 333211 1567889999999 665541 1223799997642 4799999974
No 448
>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.17 E-value=0.0035 Score=49.52 Aligned_cols=57 Identities=11% Similarity=0.028 Sum_probs=38.2
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...+++|+++| .+.++ .++.|.+||++.| +.+.+ .....||.++. + .+.|++|+...
T Consensus 7 ~~~~~~alydy---~~~~~-----~eLsf~~Gd~i~v-~~~~~-~~~~~Ww~g~~---~---g~~G~~P~~yv 63 (73)
T 2dl7_A 7 GVCFVKALYDY---EGQTD-----DELSFPEGAIIRI-LNKEN-QDDDGFWEGEF---N---GRIGVFPSVLV 63 (73)
T ss_dssp CCEEEEESSCB---CCSST-----TBCCBCTTCEEEE-EECCC-SSSSSCEEEEE---T---TEEEEECSSSE
T ss_pred CCEEEEECccC---CcCCC-----CcCCCCCCCEEEE-EECCC-CCCCCcEEEEE---C---CCEEEEChHHE
Confidence 45689999999 33221 3567789999999 55420 01127999973 2 48899999743
No 449
>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A
Probab=96.17 E-value=0.0032 Score=49.78 Aligned_cols=54 Identities=11% Similarity=0.060 Sum_probs=39.1
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...+++|+++|.+ .++ .++.|.+||++.| +...|. .||.++. + .+.|++|+...
T Consensus 6 ~~~~~~al~dy~~---~~~-----~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~---~---g~~G~~P~~yv 59 (73)
T 2dbm_A 6 SGPCCRALYDFEP---ENE-----GELGFKEGDIITL-TNQIDE----NWYEGML---H---GHSGFFPINYV 59 (73)
T ss_dssp CCCEEEESSCBCC---CST-----TCCCBCTTCEEEC-CBCSSS----SEEEEEE---T---TEEEEEESSSE
T ss_pred CCCEEEEccccCC---CCC-----CCccCCCCCEEEE-EEecCC----CEEEEEE---C---CCEEEechHHE
Confidence 4568899999933 221 2567889999999 665554 7999975 2 48999999743
No 450
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=96.16 E-value=0.0022 Score=68.24 Aligned_cols=57 Identities=16% Similarity=0.248 Sum_probs=46.3
Q ss_pred EEEEEeccCCCCCCCCCCCCCCCCCEEEEeCceeCCCCCHHHHHHHHHcCCCeEEEEEEeCCCC
Q psy9827 221 IFVKEVTHRLDNNASPGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 284 (627)
Q Consensus 221 i~V~~V~~g~~~~~~a~~~~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~v~l~V~r~~~~ 284 (627)
++|..|.+| ++|..+||++||+|++|||+++.+++ +..+++..+..++|.|.|++..
T Consensus 92 ~~V~~V~~g----sPA~~AGL~~GD~I~~InG~~v~~~~---~~~~l~~~g~~v~l~v~R~g~~ 148 (403)
T 3k50_A 92 ALISYVVPG----SPAEEAGLQRGHWIMMMNGDYITKKV---ESELLQGSTRQLQIGVYKEVVG 148 (403)
T ss_dssp EEEEEECTT----SHHHHTTCCTTCEEEEETTBCBCTTT---GGGGTSCSCEEEEEEEEEEEC-
T ss_pred EEEEEeCCC----ChHHHcCCCCCCEEEEECCEEccchh---HHHHhhCCCCEEEEEEEeCCcc
Confidence 789999887 56777899999999999999999764 5566666566899999997643
No 451
>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.12 E-value=0.0031 Score=50.62 Aligned_cols=55 Identities=15% Similarity=0.012 Sum_probs=39.8
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCC-CCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLD-RPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d-~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...+++|+++| .+.++ .++.|.+||++.| +.+.| . .||.++... .+.|++|+...
T Consensus 12 ~~~~~~alydy---~~~~~-----~eLs~~~Gd~i~v-~~~~~~~----~Ww~g~~~~-----g~~G~~P~~yv 67 (78)
T 2dl5_A 12 YPLTCKVVYSY---KASQP-----DELTIEEHEVLEV-IEDGDME----DWVKARNKV-----GQVGYVPEKYL 67 (78)
T ss_dssp SSEEEEECSCB---CCCST-----TBCCBCSSEEEEE-EECCSSS----SEEEEECTT-----CCEEEEETTTS
T ss_pred CCcEEEEceeE---CCCCC-----CCCCCCCCCEEEE-EeccCCC----CcEEEEeCC-----CCEEEEEhHHE
Confidence 45789999999 33222 2567889999999 66543 3 799997642 37899999754
No 452
>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}
Probab=96.12 E-value=0.0026 Score=49.17 Aligned_cols=51 Identities=8% Similarity=0.007 Sum_probs=36.4
Q ss_pred eeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 315 YVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 315 yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
+++|+++| .+.++ .++.|.+||++.| +.+.|. .||.++. + .+.|++|+...
T Consensus 3 ~~~alydy---~~~~~-----~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~---~---g~~G~fP~~yv 53 (65)
T 2nwm_A 3 AARLKFDF---QAQSP-----KELTLQKGDIVYI-HKEVDK----NWLEGEH---H---GRLGIFPANYV 53 (65)
T ss_dssp EEEECSCB---CCCST-----TBCCBCTTCEEEE-EECCTT----TCEEEEE---T---TEEEEECGGGE
T ss_pred EEEEeeeE---CCCCc-----CccCCcCCCEEEE-EEecCC----CEEEEEE---C---CcEEEEehhhE
Confidence 57888888 33221 2567889999999 665554 7999973 2 48999999753
No 453
>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}
Probab=96.12 E-value=0.0022 Score=48.22 Aligned_cols=52 Identities=12% Similarity=-0.021 Sum_probs=37.3
Q ss_pred eeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 314 LYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 314 ~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
.+++|+++|.+ .+ ..++.|.+||++.| +...+. .||.++. + .+.|++|+...
T Consensus 4 ~~~~al~dy~~---~~-----~~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~---~---g~~G~~P~~yv 55 (58)
T 1zlm_A 4 KVFRALYTFEP---RT-----PDELYFEEGDIIYI-TDMSDT----NWWKGTS---K---GRTGLIPSNYV 55 (58)
T ss_dssp EEEEESSCBCC---SS-----TTBCCBCTTCEEEE-EECCSS----SEEEEEE---T---TEEEEEEGGGE
T ss_pred EEEEECccCCC---CC-----CCCccCCCCCEEEE-EEeCCC----CEEEEEE---C---CCEEEEehHHE
Confidence 46888999833 22 13567889999999 555443 7999975 2 48999999753
No 454
>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A
Probab=96.11 E-value=0.0023 Score=48.21 Aligned_cols=52 Identities=12% Similarity=-0.024 Sum_probs=37.4
Q ss_pred ceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 313 NLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 313 ~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
..+++|+++| .+.+ ..++.|.+||++.| +.++|. .||.++. + .+.|++|+..
T Consensus 4 ~~~~~al~dy---~~~~-----~~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~---~---g~~G~~P~~y 55 (59)
T 2g6f_X 4 GSVVRAKFNF---QQTN-----EDELSFSKGDVIHV-TRVEEG----GWWEGTH---N---GRTGWFPSNY 55 (59)
T ss_dssp CCEEEESSCB---CCSS-----TTBCCBCTTCEEEE-EEECTT----SEEEEEE---T---TEEEEEEGGG
T ss_pred CcEEEECcee---CCCC-----cCCcCCCCCCEEEE-EEecCC----CEEEEEE---C---CcEEEEeHHH
Confidence 3478899999 3322 13567889999999 555544 7999975 2 4899999874
No 455
>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae}
Probab=96.10 E-value=0.0028 Score=49.67 Aligned_cols=55 Identities=15% Similarity=0.022 Sum_probs=38.6
Q ss_pred ceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 313 NLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 313 ~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
.++++|+++| .+..++ ..++.|.+||++.| +..++ .||.++..+ .+.|++|+...
T Consensus 5 ~~~~~alydy---~~~~~~---~~eLsf~~Gd~i~v-~~~~~-----~Ww~g~~~~-----g~~G~~P~~yv 59 (70)
T 2vkn_A 5 IYKAKALYPY---DADDDD---AYEISFEQNEILQV-SDIEG-----RWWKARRAN-----GETGIIPSNYV 59 (70)
T ss_dssp EEEEEESSCB---CCCSSS---TTBCCBCTTCEEEE-ECTTS-----SEEEEECTT-----SCEEEEEGGGE
T ss_pred CEEEEECccC---CCCCCC---CCcccCCCCCEEEE-EEcCC-----CeEEEEECC-----CCEEEEehHHE
Confidence 4678999999 333221 12567889999999 55433 799997652 48999999753
No 456
>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A
Probab=96.10 E-value=0.002 Score=48.39 Aligned_cols=51 Identities=20% Similarity=0.188 Sum_probs=36.6
Q ss_pred eeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 314 LYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 314 ~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
.+++|+++|.+ .+ ..++.|.+||++.| +.+.+. .||.++. + .+.|++|+..
T Consensus 3 ~~~~al~dy~~---~~-----~~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~---~---g~~G~~P~~y 53 (58)
T 1zx6_A 3 EYVEALYQFDP---QQ-----DGDLGLKPGDKVQL-LEKLSP----EWYKGSC---N---GRTGIFPANY 53 (58)
T ss_dssp CEEEECSCBCC---CS-----TTBCCBCTTCEEEE-EEECSS----SEEEEEE---T---TEEEEEEGGG
T ss_pred eEEEECceECC---CC-----CCCccCCCCCEEEE-EEecCC----CEEEEEE---C---CcEEEeeHHH
Confidence 36788899833 22 13567889999999 555443 7999975 2 4899999874
No 457
>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.10 E-value=0.0024 Score=50.36 Aligned_cols=55 Identities=9% Similarity=-0.078 Sum_probs=39.7
Q ss_pred CCceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 311 SQNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 311 ~~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...++++|+++| .+.+ ..++.|.+||++.| +.+.+. .||.++. + .+.|++|+...
T Consensus 7 ~~~~~~~al~dy---~~~~-----~~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~---~---g~~G~~P~~yv 61 (72)
T 2dl8_A 7 GEPIEAIAKFDY---VGRT-----ARELSFKKGASLLL-YQRASD----DWWEGRH---N---GIDGLIPHQYI 61 (72)
T ss_dssp CSCEEEEESSCB---CCSS-----SSBCCBCTTCEEEE-EEEEET----TEEEEEE---T---TEEEEECSSSE
T ss_pred CCCEEEEECccC---CcCC-----CCEeccCCCCEEEE-EeecCC----CEEEEEE---C---CEEEEEchHHe
Confidence 346789999999 3322 13567889999999 555443 7999976 2 48999999743
No 458
>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A
Probab=96.10 E-value=0.0021 Score=48.66 Aligned_cols=52 Identities=10% Similarity=-0.030 Sum_probs=37.5
Q ss_pred ceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 313 NLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 313 ~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
..+++|+++| .+.++ .++.|..||++.| +...|. .||.++. + .+.|++|+..
T Consensus 4 ~~~~~al~dy---~~~~~-----~eLs~~~Gd~i~v-~~~~~~----~W~~g~~---~---g~~G~~P~~y 55 (60)
T 1w70_A 4 HMRAEALFDF---TGNSK-----LELNFKAGDVIFL-LSRINK----DWLEGTV---R---GATGIFPLSF 55 (60)
T ss_dssp SCEEEESSCB---CCSST-----TBCCBCTTCEEEE-EEECSS----SEEEEEE---T---TEEEEEEGGG
T ss_pred CcEEEECccC---CcCCC-----CCccCCCCCEEEE-EEeCCC----CeEEEEE---C---CCEEEechHH
Confidence 4578899999 33222 3567889999999 555544 7999974 2 4899999874
No 459
>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.09 E-value=0.0033 Score=49.31 Aligned_cols=56 Identities=18% Similarity=0.065 Sum_probs=38.1
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
...+++|+++| .+.+ ..++.|.+||++.| +...+ .....||.++. + .+.|++|+..
T Consensus 6 ~~~~~~al~dy---~~~~-----~~eLs~~~Gd~i~v-~~~~~-~~~~~Ww~g~~---~---g~~G~~P~~y 61 (71)
T 2cre_A 6 SGLLARALYDN---CPDC-----SDELAFSRGDILTI-LEQHV-PESEGWWKCLL---H---GRQGLAPANR 61 (71)
T ss_dssp CCEEEEESSCC---CCSS-----SSBCCCCSSCCEEE-EESCC-TTSTTEEEEES---S---SCCEEEETTT
T ss_pred CcEEEEECccc---CcCC-----CCCCCCCCCCEEEE-eEcCC-CCCCCcEEEEE---C---CCEEEEehHH
Confidence 46789999999 3322 12567889999999 55530 00127999973 2 3789999974
No 460
>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A
Probab=96.09 E-value=0.0022 Score=48.22 Aligned_cols=52 Identities=12% Similarity=-0.023 Sum_probs=36.5
Q ss_pred eeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 315 YVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 315 yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
+++|+++| .+.+ ..++.|.+||++.| +.+.|. .||.++... + .+.|++|+..
T Consensus 2 ~~~al~dy---~~~~-----~~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~~~-~---g~~G~~P~~y 53 (58)
T 1jo8_A 2 WATAEYDY---DAAE-----DNELTFVENDKIIN-IEFVDD----DWWLGELEK-D---GSKGLFPSNY 53 (58)
T ss_dssp CEEESSCB---CCCS-----TTBCCBCTTCEEEE-EECCSS----SEEEEEETT-T---CCEEEEEGGG
T ss_pred EEEECceE---CCCC-----CCCcccCCCCEEEE-EEecCC----CcEEEEECC-C---CCEEEechHH
Confidence 46788888 3322 13567889999999 665544 799997642 2 4889999874
No 461
>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A
Probab=96.09 E-value=0.0023 Score=48.05 Aligned_cols=50 Identities=14% Similarity=0.121 Sum_probs=36.4
Q ss_pred eeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 315 YVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 315 yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
|++|+++|.+ .+ ..++.|.+||++.| +.+.|. .||.++. + .+.|++|+..
T Consensus 3 ~~~al~dy~~---~~-----~~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~---~---g~~G~~P~~y 52 (58)
T 1uti_A 3 WARALYDFEA---LE-----EDELGFRSGEVVEV-LDSSNP----SWWTGRL---H---NKLGLFPANY 52 (58)
T ss_dssp EEEESSCBCC---CS-----TTBCCBCTTCEEEE-EECCSS----SEEEEEE---T---TEEEEEEGGG
T ss_pred EEEECccCCC---CC-----cCCCCCCCCCEEEE-EEECCC----CEEEEEE---C---CeEEEeeHHH
Confidence 6788888833 22 23667889999999 555443 7999975 2 4899999874
No 462
>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.07 E-value=0.0046 Score=48.36 Aligned_cols=53 Identities=9% Similarity=-0.030 Sum_probs=37.6
Q ss_pred ceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 313 NLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 313 ~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
.-.++|+++| .+.+ ..++.|..||++.| +.+++. .||.++.. .+.|++|+...
T Consensus 8 ~~~~~al~dy---~~~~-----~~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~~------g~~G~~P~~yv 60 (70)
T 2ega_A 8 LEQYVVVSNY---KKQE-----NSELSLQAGEVVDV-IEKNES----GWWFVSTS------EEQGWVPATYL 60 (70)
T ss_dssp CBCEECCSCC---CCCS-----SSSCCCCTTCBCEE-EEECTT----SEEEEECS------SCEEEEEGGGC
T ss_pred CcEEEECceE---CCCC-----CCcccCCCCCEEEE-EEccCC----CeEEEEEC------CCEEEEehHHc
Confidence 3458899999 3322 13567889999999 665554 79999642 38899999753
No 463
>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}
Probab=96.06 E-value=0.0037 Score=48.60 Aligned_cols=54 Identities=13% Similarity=0.006 Sum_probs=39.0
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...+++|+++| .+.++ .++.|.+||++.| +.+.|. .||.++. + .+.|++|+...
T Consensus 6 ~~~~~~al~dy---~~~~~-----~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~---~---g~~G~~P~~yv 59 (68)
T 2djq_A 6 SGPRAKALCNY---RGKNP-----GDLKFNKGDVILL-RRQLDE----NWYQGEI---N---GVSGIFPASSV 59 (68)
T ss_dssp SCCEEEECSCC---CSCCT-----TCCCCCTTCEEEE-EECCCS----SEEEEEE---T---TEEEEEESSSE
T ss_pred CceEEEECCCC---CCCCc-----CCccCCCCCEEEE-EEecCC----CEEEEEE---C---CcEEEeehHHE
Confidence 45688999999 33221 2567889999999 666554 7999974 2 48999999743
No 464
>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=96.05 E-value=0.0024 Score=50.52 Aligned_cols=53 Identities=15% Similarity=0.067 Sum_probs=38.1
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
...+++|+++| .+.++ .++.|.+||++.| +...|. .||.++.. ...|++|+..
T Consensus 16 ~~~~~~Alydy---~a~~~-----~eLsf~~Gd~i~V-l~~~~~----gWw~g~~~------g~~G~fP~~y 68 (72)
T 2l0a_A 16 EARKVRAIYDF---EAAED-----NELTFKAGEIITV-LDDSDP----NWWKGETH------QGIGLFPSNF 68 (72)
T ss_dssp CCEEEEESSCB---CCSST-----TBCCBCTTCEEEE-EEEEET----TEEEEECS------SCEEECTTCC
T ss_pred CCeEEEECCcc---CCCCC-----CccCCCCCCEEEE-EEecCC----CEEEEEEC------CCEEEechhh
Confidence 45679999999 33322 3567889999999 555443 79999652 2589999864
No 465
>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A
Probab=96.04 E-value=0.0028 Score=47.52 Aligned_cols=52 Identities=10% Similarity=-0.054 Sum_probs=37.6
Q ss_pred ceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 313 NLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 313 ~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
..+++|+++|.+ .++ .++.|.+||++.| +.+++. .||.++. + .+.|++|+..
T Consensus 3 ~~~~~al~dy~~---~~~-----~eLs~~~Gd~i~v-~~~~~~----~W~~g~~---~---g~~G~~P~~y 54 (58)
T 2drm_A 3 GIQVKALYDYDA---QTG-----DELTFKEGDTIIV-HQKDPA----GWWEGEL---N---GKRGWVPANY 54 (58)
T ss_dssp CEEEEESSCBCC---CST-----TBCCBCTTCEEEE-EECCTT----SEEEEEE---T---TEEEEEEGGG
T ss_pred CcEEEECccCCC---CCc-----CCcCCCCCCEEEE-EEecCC----CEEEEEE---C---CcEEEEeHHH
Confidence 356889999933 221 3567789999999 665544 7999976 2 4899999874
No 466
>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}
Probab=96.03 E-value=0.0017 Score=49.21 Aligned_cols=53 Identities=8% Similarity=-0.068 Sum_probs=38.0
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
...+++|+++| .+.++ .++.|.+||++.| +.+.+. .||.++. + .+.|++|+..
T Consensus 5 ~~~~~~al~dy---~~~~~-----~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~---~---g~~G~~P~~y 57 (60)
T 2gnc_A 5 SPEFAIAKFDY---VGRSA-----RELSFKKGASLLL-YHRASE----DWWEGRH---N---GIDGLVPHQY 57 (60)
T ss_dssp -CEEEEESSCB---CCSST-----TBCCBCTTCEEEE-EEEEET----TEEEEEE---T---TEEEEEEGGG
T ss_pred CCEEEEECCCC---CcCCc-----CCcCCCCCCEEEE-EEecCC----CEEEEEE---C---CeEEEEeHhh
Confidence 35788999999 33221 2567789999999 665443 7999976 2 4899999864
No 467
>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens}
Probab=96.02 E-value=0.0037 Score=50.39 Aligned_cols=53 Identities=9% Similarity=-0.072 Sum_probs=38.7
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
...+++|+++| .+.++ .++.|..||++.| +.+.|. .||.++. + .+.|++|+..
T Consensus 17 ~~~~~~Alydy---~a~~~-----~eLsf~~Gd~I~V-l~~~~~----gWw~g~~---~---g~~G~fP~ny 69 (79)
T 1z9q_A 17 AAPRAEALFDF---TGNSK-----LELNFKAGDVIFL-LSRINK----DWLEGTV---R---GATGIFPLSF 69 (79)
T ss_dssp SCCCEEESSCC---CCSST-----TBCCCCTTCCBCC-CEESSS----SEEEEEE---T---TEEEEEEGGG
T ss_pred CceEEEEcCcc---CCCCC-----CcccccCCCEEEE-eEecCC----CEEEEEE---C---CeEEEecHHH
Confidence 35678999999 33322 3567889999999 665554 7999974 2 4899999974
No 468
>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}
Probab=96.02 E-value=0.0027 Score=48.00 Aligned_cols=52 Identities=10% Similarity=0.057 Sum_probs=37.7
Q ss_pred ceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 313 NLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 313 ~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
..+++|+++| .+.++ .++.|.+||++.| +.++|. .||.++. + .+.|++|+..
T Consensus 5 ~~~~~al~dy---~~~~~-----~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~---~---g~~G~~P~~y 56 (60)
T 2xmf_A 5 SPQCKALYAY---DAQDT-----DELSFNANDIIDI-IKEDPS----GWWTGRL---R---GKQGLFPNNY 56 (60)
T ss_dssp SCEEEESSCB---CCSST-----TBCCBCTTCEEEE-EEECTT----SEEEEEE---T---TEEEEEEGGG
T ss_pred CcEEEECccC---CcCCc-----CCcCCCCCCEEEE-EEecCC----CEEEEEE---C---CEEEEEcHHH
Confidence 3568899999 33221 3567889999999 655544 7999976 2 4899999864
No 469
>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A
Probab=96.01 E-value=0.0035 Score=48.02 Aligned_cols=53 Identities=9% Similarity=0.077 Sum_probs=37.5
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCC--CCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQL--DRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~--d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
...+++|+++| .+.++ .++.|.+||++.| +.++ |. .||.++. + .+.|++|+..
T Consensus 5 ~~~~~~al~dy---~~~~~-----~eLs~~~Gd~i~v-~~~~~~~~----~W~~g~~---~---g~~G~~P~~y 59 (64)
T 2jte_A 5 AKEYCRTLFPY---TGTNE-----DELTFREGEIIHL-ISKETGEA----GWWKGEL---N---GKEGVFPDNF 59 (64)
T ss_dssp SSEEEEESSCB---CCSSS-----SBCCBCTTCEEEE-EESCSSST----TEEEEEE---T---TEEEEEEGGG
T ss_pred CCEEEEECccC---CccCC-----CccCCCCCCEEEE-EECCCCCC----CEEEEEE---C---CeEEEEeHHH
Confidence 35678999999 33221 2567889999999 5543 32 7999974 2 4899999864
No 470
>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A
Probab=96.00 E-value=0.0029 Score=49.63 Aligned_cols=54 Identities=13% Similarity=0.054 Sum_probs=38.0
Q ss_pred ceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccC--CCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 313 NLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQ--LDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 313 ~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~--~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
..+++|+++| .+.++ .++.|.+||++.| +.+ .+. .||.++..+ .+.|++|+...
T Consensus 6 ~~~~~al~dy---~~~~~-----~eLs~~~Gd~i~v-~~~~~~~~----~Ww~g~~~~-----g~~G~~P~~yv 61 (71)
T 1u5s_A 6 LHVVQTLYPF---SSVTE-----EELNFEKGETMEV-IEKPENDP----EWWKCKNAR-----GQVGLVPKNYV 61 (71)
T ss_dssp SSEEEESSCC---CCCSS-----SBCCCCSSCCEEE-EECCCTTT----CEEEEEETT-----TEEEEEETTSE
T ss_pred cEEEEEcccC---CCCCC-----CcccCCCCCEEEE-EECCCCCC----CCEEEEeCC-----CCEEEEeHHHE
Confidence 3468899999 33221 2567889999999 665 333 799997532 48999999743
No 471
>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A
Probab=95.99 E-value=0.003 Score=48.51 Aligned_cols=53 Identities=8% Similarity=-0.019 Sum_probs=38.2
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
...+++|+++|.+ .++ .++.|.+||++.| +.+.|. .||.++. + .+.|++|+..
T Consensus 8 ~~~~~~al~dy~~---~~~-----~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~---~---g~~G~~P~~y 60 (65)
T 3ulr_B 8 LGITAIALYDYQA---AGD-----DEISFDPDDIITN-IEMIDD----GWWRGVC---K---GRYGLFPANY 60 (65)
T ss_dssp CCSCEEECSCBCC---CST-----TBCCBCTTCEEEE-EECCSS----SEEEEEE---T---TEEEEEEGGG
T ss_pred CceEEEEEeeECC---CCc-----CEeeEecCCEEEE-EEecCC----CEEEEEE---C---CcEEEEehHH
Confidence 3567899999933 221 2567789999999 666554 7999973 2 4889999864
No 472
>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A
Probab=95.98 E-value=0.0026 Score=49.77 Aligned_cols=52 Identities=12% Similarity=0.068 Sum_probs=37.0
Q ss_pred eeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCC--CCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 314 LYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQL--DRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 314 ~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~--d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
.+++|+++| .+.++ .++.|..||++.| +..+ +. .||.++. + .+.|++|+...
T Consensus 3 ~~~~Alydy---~a~~~-----~eLs~~~Gd~i~v-l~~~~~~~----gWw~g~~---~---g~~G~~P~~yV 56 (69)
T 2ydl_A 3 DYCKVIFPY---EAQND-----DELTIKEGDIVTL-INKDCIDV----GWWEGEL---N---GRRGVFPDNFV 56 (69)
T ss_dssp EEEEESSCB---CCCST-----TBCCBCTTCEEEE-EESCCSST----TEEEEEE---T---TEEEEEEGGGE
T ss_pred cEEEEcccC---CCCCC-----CccccCCCCEEEE-EEcCCCCC----CEEEEEE---C---CcEEEecHHHE
Confidence 367889999 33322 3567889999999 6553 33 7999975 2 48999999753
No 473
>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=95.97 E-value=0.0026 Score=49.45 Aligned_cols=53 Identities=11% Similarity=0.022 Sum_probs=37.9
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
...+++|+++| .+.++ .++.|.+||++.| +...+. .||.++. + .+.|++|+..
T Consensus 6 ~~~~~~al~dy---~~~~~-----~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~---~---g~~G~~P~~y 58 (68)
T 1wi7_A 6 SGRRCQVAFSY---LPQND-----DELELKVGDIIEV-VGEVEE----GWWEGVL---N---GKTGMFPSNF 58 (68)
T ss_dssp CCCCEEESSCB---CCSST-----TBCCBCTTCEECC-CEEEET----TEEEECS---T---TCCEEEETTS
T ss_pred CCCEEEECccC---CcCCC-----CCccCcCCCEEEE-EEcCCC----CeEEEEE---C---CcEEEEchHH
Confidence 35678999999 33221 2567889999999 555443 7999974 2 4789999974
No 474
>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.95 E-value=0.0036 Score=51.47 Aligned_cols=56 Identities=11% Similarity=0.066 Sum_probs=39.4
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...+++|+++|.|. ..+ ..++.|..||++.| +.+.|. .||.+.. + .+.|++|+...
T Consensus 15 ~~~~~~alydy~~~-a~~-----~~eLsf~~Gd~i~v-~~~~~~----~Ww~g~~---~---g~~G~fP~~yv 70 (88)
T 2dbk_A 15 GPVFAKAIQKRVPC-AYD-----KTALALEVGDIVKV-TRMNIN----GQWEGEV---N---GRKGLFPFTHV 70 (88)
T ss_dssp CCEEEEECSCBCCC-TTC-----SSBCCBCTTCEEEE-EEECTT----SCEEEEC---S---SCEEEECTTTE
T ss_pred CCEEEEEcccccCC-CCC-----CCcccCCCCCEEEE-EEecCC----CEEEEEe---C---CCEEEEehHHe
Confidence 45789999999331 112 12567889999999 666554 7999844 2 47899999753
No 475
>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=95.95 E-value=0.0046 Score=48.28 Aligned_cols=53 Identities=9% Similarity=-0.139 Sum_probs=37.4
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...+++|+++| .+.+ ..++.|.+||++.| +..++ .||.++. + .+.|++|+...
T Consensus 7 ~~~~~~al~dy---~~~~-----~~eLs~~~Gd~i~v-~~~~~-----~Ww~g~~---~---g~~G~~P~~yv 59 (69)
T 1uhf_A 7 GGEEYIALYPY---SSVE-----PGDLTFTEGEEILV-TQKDG-----EWWTGSI---G---DRSGIFPSNYV 59 (69)
T ss_dssp CSEEEECSSCB---CCSS-----SSBCCBCTTCEEEE-CEEET-----TEEEECS---T---TCCEEECGGGC
T ss_pred CCCEEEEeeeE---CCCC-----cCccCCCCCCEEEE-EEeCC-----CEEEEEe---C---CcEEEEchHHe
Confidence 34568899999 3322 12567789999999 66543 7999963 2 48899999753
No 476
>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=95.94 E-value=0.003 Score=47.36 Aligned_cols=53 Identities=6% Similarity=-0.011 Sum_probs=36.2
Q ss_pred eeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 315 YVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 315 yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
.++|+++| .+.++ .++.|..||++.| +..++ ...||.++... + .+.|++|+..
T Consensus 3 ~~~alydy---~~~~~-----~eLs~~~Gd~i~v-~~~~~---~~~W~~g~~~~-~---g~~G~~P~~y 55 (58)
T 1zuu_A 3 ENKVLYAY---VQKDD-----DEITITPGDKISL-VARDT---GSGWTKINNDT-T---GETGLVPTTY 55 (58)
T ss_dssp CCEECSCB---CCCST-----TBCCBCTTCCEEE-EECCS---SSSEEEEEETT-T---TEEEEEEGGG
T ss_pred EEEEeeeE---CCcCC-----CcccCCCCCEEEE-eEcCC---CCCCEEEEECC-C---CCEEEEEHHH
Confidence 46788888 33221 3667889999999 55553 12799997642 2 4789999864
No 477
>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens}
Probab=95.92 E-value=0.0059 Score=50.69 Aligned_cols=53 Identities=11% Similarity=0.030 Sum_probs=38.8
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
...+++|+++| .+.++ -++.|.+||++.| +.+.+. .||.++. + .+.|++|+..
T Consensus 17 ~~~~~~Alydy---~a~~~-----~eLsf~~Gd~i~V-~~~~~~----gWw~g~~---~---g~~G~fPsny 69 (92)
T 2o2o_A 17 RRRRCQVAFSY---LPQND-----DELELKVGDIIEV-VGEVEE----GWWEGVL---N---GKTGMFPSNF 69 (92)
T ss_dssp SSCEEEECSCB---CCCSS-----SCCCBCSSCEEEC-CCGGGS----SCBCCEE---T---TEECCBCSSS
T ss_pred CCeEEEEcccc---CCCCC-----ccccccCCCEEEE-eEecCC----CEEEEEE---C---CeEEEeehHH
Confidence 35688999999 33322 2567889999999 665443 7999975 2 4899999974
No 478
>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13, protein-protein interaction, structural genomics; NMR {Mus musculus}
Probab=95.90 E-value=0.007 Score=50.25 Aligned_cols=59 Identities=10% Similarity=0.029 Sum_probs=40.0
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
..++++|+++| .+.++ .++.|.+||++.| +.+++.+....||.++.. + .+.|++|+...
T Consensus 16 ~~~~~~alydy---~a~~~-----~eLsf~~Gd~i~v-~~~~~~~~~~gWw~g~~~---~--~~~G~~P~~yv 74 (93)
T 1wxu_A 16 DHVVARAEYDF---VAVSD-----EEISFRAGDMLNL-ALKEQQPKVRGWLLASLD---G--QTTGLIPANYV 74 (93)
T ss_dssp CBBCEEESSCB---CCSSS-----SBCCBCSSCBCEE-CCTTTSCSCSSCEEEESS---S--SSCEEECSTTE
T ss_pred CCEEEEECccC---CCCCC-----CccCcCCCCEEEE-EECCCCCCCCCcEEEEeC---C--cCEEEEehHHE
Confidence 35779999999 33322 2567889999999 666542222379999532 2 25899999754
No 479
>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A
Probab=95.87 E-value=0.0026 Score=48.91 Aligned_cols=57 Identities=11% Similarity=0.045 Sum_probs=38.2
Q ss_pred eeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCC-CCc-cceeeeccChh
Q psy9827 314 LYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGR-NNQ-EVQKGIIPNKA 383 (627)
Q Consensus 314 ~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~-~~~-~~~~GlIPs~~ 383 (627)
.+++|+++|.+ .+ ..++.|.+||++.| +...+. .||.++.... +|. ..+.|++|+..
T Consensus 2 ~~~~alydy~~---~~-----~~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~~~~~~g~~~g~~G~~P~~y 60 (65)
T 2oaw_A 2 ELVLALYDYQE---KS-----PREVTMKKGDILTL-LNSTNK----DWWKVEVKITVNGKTYERQGFVPAAY 60 (65)
T ss_dssp EEEEECSCBCC---SS-----TTBCCBCTTCEEEE-EECCSS----SEEEEEEEEEETTEEEEEEEEEEGGG
T ss_pred cEEEEcccCCc---cC-----CCCCCCCCCCEEEE-EEcCCC----CEEEEEEccccCCCcCCcEEEEchHH
Confidence 36788898833 22 23567789999999 665544 8999976521 111 15889999874
No 480
>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A
Probab=95.87 E-value=0.003 Score=50.86 Aligned_cols=54 Identities=11% Similarity=-0.010 Sum_probs=38.8
Q ss_pred eeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 314 LYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 314 ~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
.+++|+++| .+.+ ..++.|.+||++.| +.+++. .||.++... + .+.|++|+...
T Consensus 6 ~~~~Alydy---~~~~-----~~eLs~~~Gd~i~v-l~~~~~----~Ww~g~~~~-~---g~~G~~P~~yv 59 (79)
T 3cqt_A 6 TLFEALYDY---EART-----EDDLSFHKGEKFQI-LNSSEG----DWWEARSLT-T---GETGYIPSIYL 59 (79)
T ss_dssp CCEEESSCB---CCCS-----TTBCCBCTTCEEEE-EECTTS----SEEEEEETT-T---CCEEEEEGGGE
T ss_pred cEEEECccC---CCCC-----cCcCCCCCCCEEEE-EEecCC----CeEEEEECC-C---CCEEEeehHHe
Confidence 468889998 3322 12567889999999 665554 799997753 2 48899999754
No 481
>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A
Probab=95.86 E-value=0.0035 Score=47.33 Aligned_cols=53 Identities=6% Similarity=-0.108 Sum_probs=37.0
Q ss_pred eeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccC-CCCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 314 LYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQ-LDRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 314 ~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~-~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
.+++|+++| .+.++ .++.|.+||++.| +.. ++. .||.++... + .+.|++|+..
T Consensus 3 ~~~~al~dy---~~~~~-----~eLs~~~Gd~i~v-~~~~~~~----~Ww~g~~~~-~---g~~G~~P~~y 56 (60)
T 2v1q_A 3 ERGIVQYDF---MAESQ-----DELTIKSGDKVYI-LDDKKSK----DWWMCQLVD-S---GKSGLVPAQF 56 (60)
T ss_dssp CEEEECSCB---CCCST-----TBCCBCTTCEEEE-EESSSCS----SEEEEEETT-T---CCEEEEEGGG
T ss_pred cEEEEeeeE---CCCCC-----CCccCCCCCEEEE-EeCCCCC----CCEEEEECC-C---CCEEEEEHHH
Confidence 467888888 33221 2567789999999 555 233 799997642 2 4889999864
No 482
>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.84 E-value=0.0026 Score=51.22 Aligned_cols=54 Identities=15% Similarity=-0.037 Sum_probs=38.4
Q ss_pred ceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 313 NLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 313 ~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
..+++|+++| .+.++ .++.|.+||++.| +..++ .||.++... + .+.|+||+...
T Consensus 17 ~~~~~Alydy---~a~~~-----~eLs~~~Gd~i~v-~~~~~-----~Ww~~~~~~-~---g~~G~~P~~yv 70 (79)
T 2cud_A 17 SDFLAVLSDY---PSPDI-----SPPIFRRGEKLRV-ISDEG-----GWWKAISLS-T---GRESYIPGICV 70 (79)
T ss_dssp CCEEEESSCS---SCTTT-----SCCSSCTTCEEEE-EEEET-----TEEEEEETT-T---CCEEEEEGGGE
T ss_pred CeEEEEccCC---CCCCC-----CcCCCCCCCEEEE-EecCC-----CeEEEEECC-C---CCEEEeeHHHe
Confidence 4578899999 33221 2567789999999 55433 799997653 2 38899999754
No 483
>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.84 E-value=0.0057 Score=49.07 Aligned_cols=54 Identities=9% Similarity=-0.047 Sum_probs=38.8
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...+++|+++| .+.++ .++.|.+||++.| +.+.+. .||.++. + .+.|++|+...
T Consensus 6 ~~~~~~al~dy---~~~~~-----~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~---~---g~~G~~P~~yv 59 (79)
T 2yun_A 6 SGRLCKALYSF---QARQD-----DELNLEKGDIVII-HEKKEE----GWWFGSL---N---GKKGHFPAAYV 59 (79)
T ss_dssp CSEEEEESSCB---CCSST-----TBCCBCTTCEEEE-EECCSS----SCEEEES---S---SCEEEECSTTE
T ss_pred CCCEEEECccC---CcCCC-----CCcCCCCCCEEEE-EEcCCC----CEEEEEE---C---CCEEEEEhHHe
Confidence 45688999999 33221 2567889999999 655444 7999973 2 37899999754
No 484
>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*
Probab=95.83 E-value=0.003 Score=48.11 Aligned_cols=52 Identities=13% Similarity=0.004 Sum_probs=36.8
Q ss_pred eeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 315 YVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 315 yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
+++|+++|.+ .++ .++.|..||++.| +.+.|. .||.++... + .+.|++|+..
T Consensus 5 ~~~al~~y~~---~~~-----~eLs~~~Gd~i~v-~~~~~~----~W~~g~~~~-~---g~~G~fP~~y 56 (62)
T 2fpe_A 5 THRAIFRFVP---RHE-----DELELEVDDPLLV-ELQAED----YWYEAYNMR-T---GARGVFPAYY 56 (62)
T ss_dssp CEEECSCBCC---SST-----TBCCBCTTCEEEE-EEECTT----SEEEEEETT-T---CCEEEEEGGG
T ss_pred EEEECccCCc---cCc-----CcCcCCCCCEEEE-EEecCC----CEEEEEECC-C---CCEEEechHH
Confidence 5788888833 221 2567889999999 555554 799997532 2 4799999874
No 485
>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A
Probab=95.82 E-value=0.0038 Score=47.39 Aligned_cols=53 Identities=8% Similarity=-0.071 Sum_probs=36.2
Q ss_pred ceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 313 NLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 313 ~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
..+++|+++|. +.++ .++.|.+||++.| +.+.+. .||.++.. + ..-|++|+..
T Consensus 3 ~~~~~al~dy~---~~~~-----~eLs~~~Gd~i~v-~~~~~~----~W~~g~~~---g--~~gG~~P~~y 55 (61)
T 1y0m_A 3 KSAVKALFDYK---AQRE-----DELTFTKSAIIQN-VEKQDG----GWWRGDYG---G--KKQLWFPSNY 55 (61)
T ss_dssp CCCEEESSCBC---CCST-----TBCCBCTTCEEEE-EECCSS----SEEEEEET---T--EEEEEEEGGG
T ss_pred CCEEEECcCCC---cCCC-----CCcCCcCCCEEEE-EEecCC----CEEEEEEC---C--eEEEEEChHH
Confidence 35788999993 3221 2567889999999 665444 79999662 2 2335999864
No 486
>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=95.82 E-value=0.0042 Score=49.19 Aligned_cols=53 Identities=19% Similarity=0.127 Sum_probs=38.4
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...+++|+++| .+.++ .++.|.+||++.| +.+++ .||.++. + .+.|++|+...
T Consensus 9 ~~~~~~al~dy---~~~~~-----~eLs~~~Gd~i~v-~~~~~-----~Ww~g~~---~---g~~G~~P~~yv 61 (74)
T 1j3t_A 9 ENLKAQALCSW---TAKKD-----NHLNFSKHDIITV-LEQQE-----NWWFGEV---H---GGRGWFPKSYV 61 (74)
T ss_dssp CCCEEEESSCB---CCCST-----TBCCBCTTCEEEE-EEECS-----SEEEEES---T---TCCCEEEGGGE
T ss_pred CCeEEEECCCC---CCCCC-----CccCCCCCCEEEE-EecCC-----CEEEEEE---C---CcEEEEchHHe
Confidence 46789999999 33222 2567889999999 66543 6999975 2 37899999753
No 487
>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=95.80 E-value=0.0055 Score=49.28 Aligned_cols=59 Identities=12% Similarity=-0.016 Sum_probs=41.4
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...|++|+++| .+.+ ..++.|..||++.| +.+++. .||.++... .+...+.|++|+...
T Consensus 6 ~~~~~~al~dy---~~~~-----~~eLs~~~Gd~i~v-~~~~~~----gWw~g~~~~-~g~~~~~G~fP~~yv 64 (80)
T 1ue9_A 6 SGEIAQVTSAY---VASG-----SEQLSLAPGQLILI-LKKNTS----GWWQGELQA-RGKKRQKGWFPASHV 64 (80)
T ss_dssp CCEEEEECSCC---CCCS-----TTBCCCCTTCEEEE-EEECSS----SEEEEEECS-CCSSCCEEEEETTSE
T ss_pred CCeEEEECccc---CCCC-----CCCCCCCCCCEEEE-EEecCC----CcEEEEECC-CCCCCcEEEEchHHe
Confidence 45688999999 3322 23567889999999 665554 799997653 222348999999753
No 488
>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.80 E-value=0.0047 Score=48.21 Aligned_cols=56 Identities=13% Similarity=-0.051 Sum_probs=39.5
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...+++|+++| .+.++ .++.|..||++.| +.+.+. .||.++... + .+.|++|+...
T Consensus 6 ~~~~~~al~dy---~~~~~-----~eLs~~~Gd~i~v-~~~~~~----gW~~g~~~~-~---g~~G~~P~~yv 61 (70)
T 2ct3_A 6 SGTPYRAMYQY---RPQNE-----DELELREGDRVDV-MQQCDD----GWFVGVSRR-T---QKFGTFPGNYV 61 (70)
T ss_dssp CCEEEEESSCB---CCSST-----TBCCBCTTEEEEE-EEECSS----SCEEEEESS-S---CCEEEECTTTE
T ss_pred CCcEEEECccC---CcCCc-----CCccCCCCCEEEE-EEECCC----CEEEEEECC-C---CCEEEechHHe
Confidence 35678999999 33221 2567889999999 655444 799997642 2 47899999753
No 489
>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=95.79 E-value=0.0056 Score=50.56 Aligned_cols=54 Identities=13% Similarity=0.054 Sum_probs=38.7
Q ss_pred ceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccC--CCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 313 NLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQ--LDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 313 ~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~--~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
..+++|+++| .+.++ .++.|.+||++.| +.+ .|. .||.++..+ .+.|++|+...
T Consensus 17 ~~~~~alydy---~~~~~-----~eLs~~~Gd~i~v-~~~~~~~~----~Ww~g~~~~-----g~~G~~P~~yv 72 (91)
T 1wx6_A 17 LHVVQTLYPF---SSVTE-----EELNFEKGETMEV-IEKPENDP----EWWKCKNAR-----GQVGLVPKNYV 72 (91)
T ss_dssp CEEEEESSCC---CCSSS-----SBCCCCTTCEEEE-EECCSSCT----TEEEEECTT-----CCEEEEEGGGE
T ss_pred cEEEEEeecC---CcCCC-----CcccCCCCCEEEE-EECCCCCC----CcEEEEeCC-----CCEEEEchHHE
Confidence 4579999999 33322 3567889999999 665 333 799997532 48899999754
No 490
>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.78 E-value=0.0071 Score=47.72 Aligned_cols=56 Identities=7% Similarity=-0.074 Sum_probs=38.3
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...+++|+++| .+.++ .++.|.+||++.| +.+.+ ....||.++. + .+.|++|+...
T Consensus 6 ~~~~~~al~dy---~~~~~-----~eLs~~~Gd~i~v-~~~~~--~~~~Ww~g~~---~---g~~G~~P~~yv 61 (73)
T 2dm1_A 6 SGGTAVARYNF---AARDM-----RELSLREGDVVRI-YSRIG--GDQGWWKGET---N---GRIGWFPSTYV 61 (73)
T ss_dssp SSSEEEESSCB---CCCST-----TBCCBCTTCEEEC-CBSSS--SSSSCEEEEE---T---TEEEEECSSSE
T ss_pred CCCEEEECccC---CcCCC-----CcCCCCCCCEEEE-EEecC--CCCCeEEEEE---C---CeEEEeehHHE
Confidence 35678999999 33221 3567889999999 55431 0127999974 2 48899999754
No 491
>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}
Probab=95.78 E-value=0.0045 Score=48.07 Aligned_cols=53 Identities=9% Similarity=-0.054 Sum_probs=37.5
Q ss_pred ceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 313 NLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 313 ~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
...++|+++| .+.+ ..++.|.+||++.| +.+.+. .||.++..+ .+.|++|+..
T Consensus 10 ~~~~~al~dy---~~~~-----~~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~~~-----g~~G~~P~~y 62 (68)
T 1s1n_A 10 GEEYIAVGDF---TAQQ-----VGDLTFKKGEILLV-IEKKPD----GWWIAKDAK-----GNEGLVPRTY 62 (68)
T ss_dssp CEEEEECSCB---CCSS-----SSCCCBCSSEEEEE-CSCCSS----SEEEEECSS-----SCEEEEESTT
T ss_pred CCEEEEcccC---CCCC-----CCcCCCCCCCEEEE-EEcCCC----CeEEEEECC-----CCEEEEehHH
Confidence 4556789998 3322 13567789999999 666554 799997542 4789999974
No 492
>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.77 E-value=0.0051 Score=49.57 Aligned_cols=54 Identities=9% Similarity=-0.080 Sum_probs=38.5
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...+++|+++| .+.++ .++.|.+||++.| +.+++. .||.++.. .+.|++|+...
T Consensus 7 ~~~~~~al~dy---~~~~~-----~eLs~~~Gd~i~v-l~~~~~----gWw~g~~~------g~~G~~P~~yv 60 (80)
T 2ekh_A 7 GATSYMTCSAY---QKVQD-----SEISFPAGVEVQV-LEKQES----GWWYVRFG------ELEGWAPSHYL 60 (80)
T ss_dssp SCEEEEECSCB---CCSST-----TSCCBCTTCEEEE-EEECTT----SEEEEEET------TEEEEEETTTE
T ss_pred CCCEEEECCCC---CCCCC-----CccCcCCCCEEEE-EEeCCC----CeEEEEEC------CCEEEEEhHHe
Confidence 34567789998 33221 3567889999999 666554 79999642 48999999754
No 493
>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=95.76 E-value=0.0039 Score=51.47 Aligned_cols=54 Identities=17% Similarity=0.000 Sum_probs=39.0
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCC-----CCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQL-----DRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~-----d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
...+++|+++| .+.++ .++.|..||++.| +.++ +. .||.++..+ .+.|++|+..
T Consensus 28 ~~~~~~Alydy---~a~~~-----~ELsf~~GD~I~V-l~~~~~~~~~~----gWw~g~~~~-----g~~G~fP~ny 86 (89)
T 2rf0_A 28 AGPVWTAVFDY---EAAGD-----EELTLRRGDRVQV-LSQDCAVSGDE----GWWTGQLPS-----GRVGVFPSNY 86 (89)
T ss_dssp CCCEEEECSCB---CCSST-----TBCCBCTTCEEEE-EECCHHHHSST----TEEEEECTT-----CCEEEEEGGG
T ss_pred CCcEEEECCcc---CCCCC-----CccccCCCCEEEE-EeccCCcccCC----CEEEEEECC-----CCEEEEcHHH
Confidence 35678999999 33322 2567889999999 6653 33 799997642 4889999864
No 494
>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}
Probab=95.75 E-value=0.0028 Score=47.69 Aligned_cols=53 Identities=8% Similarity=0.011 Sum_probs=36.9
Q ss_pred eeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 314 LYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 314 ~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
.+++|+++|.+ .++ .++.|.+||++.| +.+.+. .||.++... + .+.|++|+..
T Consensus 2 ~~~~al~d~~~---~~~-----~eLs~~~Gd~i~v-~~~~~~----gW~~g~~~~-~---g~~G~~P~~y 54 (59)
T 1yn8_A 2 QRAVALYDFEP---END-----NELRLAEGDIVFI-SYKHGQ----GWLVAENES-G---SKTGLVPEEF 54 (59)
T ss_dssp EEEEECSCBCC---CST-----TBCCBCTTCEEEE-EEEEET----TEEEEECTT-S---SCEEEEEGGG
T ss_pred CEEEECccCCC---CCC-----CCcCCCCCCEEEE-EEcCCC----CeEEEEECC-C---CCEEEEehHH
Confidence 35788888833 221 3567889999999 555443 699997653 1 4889999864
No 495
>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}
Probab=95.75 E-value=0.004 Score=50.21 Aligned_cols=54 Identities=13% Similarity=0.030 Sum_probs=39.3
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCc-CccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPI-NNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~-wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...+++|+++| ...++ .++.|..||++.| +.+.|. . ||.++. + .+.|++|+...
T Consensus 9 ~~~~~~alydy---~~~~~-----~eLsf~~Gd~i~v-~~~~~~----~gWw~g~~---~---g~~G~fP~~yv 63 (80)
T 2i0n_A 9 FAKYARALKDY---NVSDT-----SLLPFKRNDIITI-TFKDQE----NKWFMGQL---N---GKEGSFPVDHV 63 (80)
T ss_dssp CCCEEEESSCB---CCCSS-----SSCCBCSSEEEEE-EEESSS----SSEEEEEE---T---TEEEEEEGGGE
T ss_pred CCeEEEECCCC---CcCCC-----CCcCCCCCCEEEE-EEecCC----CCEEEEEE---C---CcEEEechHHE
Confidence 46789999999 33222 3567889999999 666554 6 999963 2 48899999753
No 496
>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A
Probab=95.75 E-value=0.0032 Score=48.85 Aligned_cols=54 Identities=9% Similarity=-0.023 Sum_probs=37.5
Q ss_pred eeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 314 LYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 314 ~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
.++||+++| .+..+ ...++.|..||++.| +.+.+. .||.+.. + .+.|++|+...
T Consensus 2 ~~~~al~dy---~~~~~---~~~eLsf~~Gd~i~v-~~~~~~----~Ww~g~~---~---g~~G~fP~~yv 55 (67)
T 2bzy_A 2 VFAKAIQKR---VPCAY---DKTALALEVGDIVKV-TRMNIN----GQWEGEV---N---GRKGLFPFTHV 55 (67)
T ss_dssp EEEEECSCB---CSEEE---CTTBCCBCTTCEEEE-EEECSS----SEEEEEE---T---TEEEEEEGGGE
T ss_pred cEEEEeeeE---CCCCC---CCCccccCCCCEEEE-EEecCC----CeEEEEe---C---CcEEEEehHHe
Confidence 478899999 33210 123667889999999 665554 7999844 2 48999999753
No 497
>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A
Probab=95.75 E-value=0.0045 Score=47.92 Aligned_cols=54 Identities=15% Similarity=0.012 Sum_probs=38.6
Q ss_pred ceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 313 NLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 313 ~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
..+++|+++| .+.++ .++.|.+||++.| +.+.|. .||.++..+ . .+.|++|+..
T Consensus 6 ~~~~~al~dy---~~~~~-----~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~~~-~---g~~G~~P~~y 59 (67)
T 2o9s_A 6 TGEAIAKFNF---NGDTQ-----VEMSFRKGERITL-LRQVDE----NWYEGRIPG-T---SRQGIFPITY 59 (67)
T ss_dssp SEEEEECSCB---CCSST-----TBCCBCTTCEEEE-EEECSS----SEEEEECTT-S---SCEEEEEGGG
T ss_pred CEEEEECccC---CcCCc-----CccCCCCCCEEEE-EEecCC----CEEEEEECC-C---CCEEEEChHH
Confidence 4568899999 33221 2567889999999 655444 799997654 2 4899999874
No 498
>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}
Probab=95.74 E-value=0.0061 Score=48.03 Aligned_cols=53 Identities=9% Similarity=0.037 Sum_probs=38.2
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCC--CCCCCCcCccccccCCCCccceeeeccChh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQL--DRPVSPINNSMDSLGRNNQEVQKGIIPNKA 383 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~--d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~ 383 (627)
...+++|+++|.+ .+ ..++.|.+||++.| +..+ +. .||.++. + .+.|++|+..
T Consensus 8 ~~~~~~al~dy~~---~~-----~~eLs~~~Gd~i~v-~~~~~~~~----~W~~g~~---~---g~~G~~P~~y 62 (73)
T 2k9g_A 8 SKDYCKVIFPYEA---QN-----DDELTIKEGDIVTL-INKDCIDV----GWWEGEL---N---GRRGVFPDNF 62 (73)
T ss_dssp SCEEEEECSCBCC---SS-----TTBCCBCTTCEEEE-EECCSSST----TEEEEEE---T---TEEEEEEGGG
T ss_pred CccEEEECccCCC---CC-----CCeeeECCCCEEEE-EECCCCCC----CEEEEEE---C---CeEEEEchHH
Confidence 4568999999933 22 13567889999999 5553 33 7999974 2 4899999974
No 499
>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus}
Probab=95.74 E-value=0.0039 Score=48.71 Aligned_cols=56 Identities=13% Similarity=-0.034 Sum_probs=39.0
Q ss_pred CceeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 312 QNLYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 312 ~~~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
...+++|+++|.+ .++ .++.|..||++.| +.+.+. .||.++... + .+.|++|+...
T Consensus 6 ~~~~~~al~~y~~---~~~-----~eLs~~~Gd~i~v-~~~~~~----~Ww~g~~~~-~---g~~G~~P~~yv 61 (70)
T 2cuc_A 6 SGNMFVALHTYSA---HRP-----EELDLQKGEGIRV-LGKYQD----GWLKGLSLL-T---GRTGIFPSDYV 61 (70)
T ss_dssp SSCCEECCSCBCC---CST-----TBCCBCTTCEEEE-EEEEET----TEEEEEETT-T---CCEEEEEGGGC
T ss_pred CCcEEEECeeECc---CCC-----CcCCCCCCCEEEE-EEecCC----CeEEEEECC-C---CCEEEEchHHe
Confidence 3457889999933 221 2567789999999 655443 799997432 2 48899999753
No 500
>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}
Probab=95.73 E-value=0.0031 Score=49.98 Aligned_cols=54 Identities=6% Similarity=-0.052 Sum_probs=38.5
Q ss_pred eeeCCCCCCCCCCCccCcCCCCCCCCCCCCCcccccccCCCCCCCCcCccccccCCCCccceeeeccChhh
Q psy9827 314 LYVQPPTRGGPNNLLEDKSNLVPRAGRSRNPLLDVSLSQLDRPVSPINNSMDSLGRNNQEVQKGIIPNKAR 384 (627)
Q Consensus 314 ~yvra~~~y~~~~~~~d~~~~~~~~gl~~gdil~v~~~~~d~~~~~~wwqa~~~~~~~~~~~~GlIPs~~~ 384 (627)
.+++|+++| .+.++ .++.|.+||++.| +.+.+. .||.++... + .+.|++|+...
T Consensus 6 ~~~~Alydy---~a~~~-----~eLs~~~Gd~i~v-~~~~~~----gWw~g~~~~-~---g~~G~~P~~yv 59 (73)
T 2lcs_A 6 QRAVALYDF---EPEND-----NELRLAEGDIVFI-SYKHGQ----GWLVAENES-G---SKTGLVPEEFV 59 (73)
T ss_dssp EEEEESSCB---CCSST-----TBCCBCTTCEEEE-EEEETT----TEEEEECTT-S---SCEEEEESTTE
T ss_pred CEEEECccC---CCCCC-----CccCCcCCCEEEE-EEEcCC----CEEEEEECC-C---CCEEEeeHHHE
Confidence 467889998 33222 3567889999999 665554 799997653 1 48899999754
Done!