Query psy9828
Match_columns 311
No_of_seqs 191 out of 535
Neff 4.6
Searched_HMMs 29240
Date Fri Aug 16 20:42:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9828.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9828hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3shw_A Tight junction protein 100.0 2.6E-37 9.1E-42 307.5 16.1 200 2-212 54-417 (468)
2 3tsz_A Tight junction protein 100.0 1.7E-34 6E-39 280.3 14.8 184 2-196 62-390 (391)
3 3kfv_A Tight junction protein 100.0 3.2E-33 1.1E-37 265.6 11.5 100 87-197 183-300 (308)
4 3tvt_A Disks large 1 tumor sup 100.0 1.7E-33 5.8E-38 264.7 9.1 102 84-196 169-286 (292)
5 2xkx_A Disks large homolog 4; 100.0 1.9E-30 6.7E-35 267.6 15.3 183 2-195 363-716 (721)
6 1kjw_A Postsynaptic density pr 99.9 1.5E-26 5.2E-31 216.9 6.1 100 86-196 176-291 (295)
7 4dey_A Voltage-dependent L-typ 99.9 1E-21 3.5E-26 188.8 9.4 86 90-186 217-320 (337)
8 3ney_A 55 kDa erythrocyte memb 99.7 1.2E-17 4E-22 149.1 5.2 99 85-194 91-197 (197)
9 1ex7_A Guanylate kinase; subst 99.4 1.8E-13 6.1E-18 120.7 7.2 93 84-187 72-185 (186)
10 3a00_A Guanylate kinase, GMP k 98.9 7.8E-10 2.7E-14 94.4 6.1 86 90-186 80-184 (186)
11 1kgd_A CASK, peripheral plasma 98.8 2.1E-09 7.1E-14 91.4 4.9 86 90-187 84-179 (180)
12 3tau_A Guanylate kinase, GMP k 98.7 3.5E-09 1.2E-13 92.1 2.6 94 85-189 80-191 (208)
13 1s96_A Guanylate kinase, GMP k 98.5 1.5E-07 5.1E-12 84.0 7.7 87 90-187 96-198 (219)
14 3tr0_A Guanylate kinase, GMP k 98.3 1.9E-06 6.4E-11 72.9 8.4 88 90-188 85-188 (205)
15 2qor_A Guanylate kinase; phosp 98.3 1.5E-06 5.3E-11 74.7 7.3 88 90-188 91-198 (204)
16 1lvg_A Guanylate kinase, GMP k 98.2 2.2E-06 7.4E-11 74.2 7.5 87 90-187 83-188 (198)
17 3lnc_A Guanylate kinase, GMP k 97.9 8.4E-06 2.9E-10 71.2 5.2 90 90-190 106-212 (231)
18 2lj0_A Sorbin and SH3 domain-c 97.7 2.4E-05 8.2E-10 58.0 3.5 34 41-74 3-36 (65)
19 1b07_A Protein (proto-oncogene 97.6 4.3E-05 1.5E-09 55.9 3.2 33 42-74 1-33 (65)
20 2drm_A Acanthamoeba myosin IB; 97.5 5.9E-05 2E-09 53.1 3.7 33 42-74 1-33 (58)
21 1zlm_A Osteoclast stimulating 97.5 6.3E-05 2.2E-09 53.2 3.6 33 42-74 1-33 (58)
22 2lx7_A GAS-7, growth arrest-sp 97.5 5.6E-05 1.9E-09 55.4 3.4 29 46-74 5-34 (60)
23 1wyx_A CRK-associated substrat 97.5 6.1E-05 2.1E-09 55.1 3.5 31 44-74 3-33 (69)
24 1tg0_A BBC1 protein, myosin ta 97.5 6.8E-05 2.3E-09 54.7 3.8 34 41-74 4-37 (68)
25 2iim_A Proto-oncogene tyrosine 97.5 6.2E-05 2.1E-09 53.9 3.5 34 41-74 3-36 (62)
26 2dlp_A KIAA1783 protein; SH3 d 97.5 5.9E-05 2E-09 57.6 3.5 34 41-74 5-38 (85)
27 2ak5_A RHO guanine nucleotide 97.5 6.4E-05 2.2E-09 54.0 3.4 33 42-74 4-36 (64)
28 2gnc_A SLIT-ROBO RHO GTPase-ac 97.5 7E-05 2.4E-09 53.4 3.3 33 42-74 4-36 (60)
29 1k4u_S Phagocyte NADPH oxidase 97.5 8E-05 2.7E-09 53.3 3.6 33 42-74 3-35 (62)
30 2b86_A Cytoplasmic protein NCK 97.5 7.4E-05 2.5E-09 55.3 3.5 32 43-74 3-34 (67)
31 1uti_A GRB2-related adaptor pr 97.5 7.4E-05 2.5E-09 52.7 3.2 29 46-74 3-31 (58)
32 2ed1_A 130 kDa phosphatidylino 97.4 8.5E-05 2.9E-09 55.5 3.7 33 42-74 8-40 (76)
33 2ege_A Uncharacterized protein 97.4 9.7E-05 3.3E-09 55.2 3.9 32 42-73 5-43 (75)
34 1w70_A Neutrophil cytosol fact 97.4 7.2E-05 2.5E-09 53.3 3.0 32 43-74 3-34 (60)
35 2i0n_A Class VII unconventiona 97.4 7.6E-05 2.6E-09 56.5 3.2 34 41-74 7-40 (80)
36 1oot_A Hypothetical 40.4 kDa p 97.4 8.2E-05 2.8E-09 52.8 3.2 32 43-74 2-33 (60)
37 1ujy_A RHO guanine nucleotide 97.4 7.4E-05 2.5E-09 55.7 2.9 35 40-74 6-40 (76)
38 2cre_A HEF-like protein; SH3 d 97.4 9.9E-05 3.4E-09 54.0 3.6 33 42-74 5-37 (71)
39 1g2b_A Spectrin alpha chain; c 97.4 8.7E-05 3E-09 53.3 3.2 33 42-74 19-51 (62)
40 2eqi_A Phospholipase C, gamma 97.4 0.0001 3.5E-09 53.8 3.5 33 42-74 5-37 (69)
41 1cka_A C-CRK N-terminal SH3 do 97.4 9.8E-05 3.3E-09 51.9 3.2 29 46-74 3-31 (57)
42 1sem_A SEM-5; SRC-homology 3 ( 97.4 0.0001 3.5E-09 51.9 3.2 31 44-74 2-32 (58)
43 1x2k_A OSTF1, osteoclast stimu 97.4 0.00013 4.5E-09 53.2 3.9 34 41-74 4-37 (68)
44 2vwf_A Growth factor receptor- 97.4 0.00011 3.8E-09 51.7 3.2 30 45-74 3-32 (58)
45 1zx6_A YPR154WP; SH3 domain, p 97.4 0.00011 3.7E-09 52.0 3.1 30 45-74 3-32 (58)
46 2ew3_A SH3-containing GRB2-lik 97.4 0.00011 3.8E-09 54.2 3.3 32 43-74 2-33 (68)
47 2dl8_A SLIT-ROBO RHO GTPase-ac 97.4 0.00013 4.3E-09 54.0 3.6 34 41-74 6-39 (72)
48 2dmo_A Neutrophil cytosol fact 97.4 0.00014 4.7E-09 53.2 3.8 33 42-74 5-37 (68)
49 2jte_A CD2-associated protein; 97.4 0.00014 4.6E-09 52.3 3.7 33 42-74 4-36 (64)
50 1jo8_A ABP1P, actin binding pr 97.4 9.6E-05 3.3E-09 52.2 2.8 29 46-74 2-30 (58)
51 1uj0_A Signal transducing adap 97.3 0.00013 4.4E-09 52.4 3.4 32 43-74 4-35 (62)
52 2dl7_A KIAA0769 protein; SH3 d 97.3 0.00015 5E-09 53.7 3.8 33 42-74 6-38 (73)
53 3ulr_B SRC substrate cortactin 97.3 0.00011 3.7E-09 52.8 3.0 34 41-74 6-39 (65)
54 1wxt_A Hypothetical protein FL 97.3 0.00016 5.6E-09 52.8 3.9 33 42-74 5-37 (68)
55 2g6f_X RHO guanine nucleotide 97.3 0.00012 4.2E-09 51.8 3.1 31 44-74 4-34 (59)
56 1y0m_A 1-phosphatidylinositol- 97.3 0.0001 3.6E-09 52.5 2.7 31 44-74 3-33 (61)
57 2csi_A RIM-BP2, RIM binding pr 97.3 0.00015 5.2E-09 54.2 3.7 34 41-74 4-44 (76)
58 2d8j_A FYN-related kinase; SH3 97.3 0.00014 4.8E-09 53.9 3.5 32 43-74 6-37 (77)
59 2k2m_A EPS8-like protein 1; al 97.3 0.00015 5E-09 53.1 3.5 33 42-74 6-38 (68)
60 2oaw_A Spectrin alpha chain, b 97.3 0.00013 4.4E-09 52.2 3.1 30 45-74 2-31 (65)
61 1i07_A Epidermal growth factor 97.3 0.00015 5E-09 51.6 3.3 29 46-74 3-31 (60)
62 1x2q_A Signal transducing adap 97.3 0.00017 5.8E-09 55.4 3.7 34 41-74 14-47 (88)
63 2dl3_A Sorbin and SH3 domain-c 97.3 0.00019 6.5E-09 52.1 3.8 33 42-74 5-37 (68)
64 1wxb_A Epidermal growth factor 97.3 0.00013 4.4E-09 53.4 2.9 33 42-74 5-37 (68)
65 2dl4_A Protein STAC; SH3 domai 97.3 0.00016 5.6E-09 52.8 3.4 33 42-74 5-37 (68)
66 1w1f_A Tyrosine-protein kinase 97.3 0.00017 5.9E-09 51.8 3.4 33 42-74 5-37 (65)
67 1z6g_A Guanylate kinase; struc 97.3 0.001 3.5E-08 58.2 9.1 90 90-190 102-211 (218)
68 3rnj_A Brain-specific angiogen 97.3 0.00018 6.1E-09 52.2 3.5 32 42-73 5-37 (67)
69 2dm1_A Protein VAV-2; RHO fami 97.3 0.00018 6.1E-09 53.3 3.5 33 42-74 5-37 (73)
70 2xmf_A Myosin 1E SH3; motor pr 97.3 0.00018 6.1E-09 51.1 3.4 32 43-74 4-35 (60)
71 2l0a_A STAM-1, signal transduc 97.3 0.0002 6.8E-09 53.8 3.8 34 41-74 14-47 (72)
72 2ydl_A SH3 domain-containing k 97.3 0.00016 5.6E-09 53.5 3.2 29 46-74 4-32 (69)
73 2rqv_A BUD emergence protein 1 97.3 0.0001 3.4E-09 59.9 2.2 34 41-74 2-35 (108)
74 2v1q_A SLA1, cytoskeleton asse 97.3 0.00017 5.8E-09 50.9 3.1 31 44-74 2-32 (60)
75 2fei_A CD2-associated protein; 97.2 0.00014 4.9E-09 53.2 2.8 30 45-74 2-31 (65)
76 2x3w_D Syndapin I, protein kin 97.2 0.00018 6E-09 51.0 3.1 31 44-74 3-33 (60)
77 1yn8_A NBP2, NAP1-binding prot 97.2 0.00019 6.5E-09 50.5 3.2 30 45-74 2-31 (59)
78 2bzy_A CRK-like protein, CRKL 97.2 0.00016 5.4E-09 52.7 2.8 30 45-74 2-33 (67)
79 2cud_A SRC-like-adapter; SH3 d 97.2 0.00017 5.8E-09 54.5 3.0 32 43-74 16-47 (79)
80 2enm_A Sorting nexin-9; SH3-li 97.2 0.00023 7.8E-09 53.0 3.7 34 41-74 6-40 (77)
81 2eyx_A V-CRK sarcoma virus CT1 97.2 0.00016 5.3E-09 52.9 2.7 32 43-74 5-38 (67)
82 2djq_A SH3 domain containing r 97.2 0.00023 8E-09 51.7 3.7 33 42-74 5-37 (68)
83 1gbq_A GRB2; complex (signal t 97.2 0.00018 6.2E-09 53.5 3.1 33 42-74 7-39 (74)
84 2ke9_A Caskin-2; SH3 domain, A 97.2 0.00021 7.2E-09 54.9 3.5 34 41-74 15-49 (83)
85 1x69_A Cortactin isoform A; SH 97.2 0.00016 5.5E-09 54.3 2.8 34 41-74 14-47 (79)
86 2ysq_A RHO guanine nucleotide 97.2 0.00023 7.8E-09 53.7 3.6 34 41-74 7-40 (81)
87 2k9g_A SH3 domain-containing k 97.2 0.00021 7.3E-09 52.7 3.4 34 41-74 6-39 (73)
88 2dbk_A CRK-like protein; struc 97.2 0.00024 8.1E-09 54.6 3.7 33 42-74 14-48 (88)
89 3u23_A CD2-associated protein; 97.2 0.0002 6.8E-09 51.1 3.1 32 43-74 6-37 (65)
90 1j3t_A Intersectin 2; beta bar 97.2 0.00023 7.8E-09 52.9 3.5 33 42-74 8-40 (74)
91 3c0c_A Endophilin-A2; endocyto 97.2 0.00022 7.4E-09 52.8 3.3 33 42-74 11-43 (73)
92 2dbm_A SH3-containing GRB2-lik 97.2 0.00024 8.4E-09 52.4 3.6 34 41-74 4-37 (73)
93 2nwm_A Vinexin; cell adhesion; 97.2 0.00022 7.4E-09 52.2 3.2 29 46-74 3-31 (65)
94 2yuq_A Tyrosine-protein kinase 97.2 0.0002 6.8E-09 54.6 3.2 33 42-74 17-49 (85)
95 1ugv_A KIAA0621, olygophrenin- 97.2 0.00013 4.6E-09 53.9 2.1 32 42-73 8-39 (72)
96 1ue9_A Intersectin 2; beta bar 97.2 0.00024 8.3E-09 53.2 3.6 33 42-74 5-37 (80)
97 2d8h_A SH3YL1 protein; SH3 dom 97.2 0.00019 6.4E-09 54.0 2.9 34 41-74 14-47 (80)
98 2fpe_A C-JUN-amino-terminal ki 97.2 0.00019 6.6E-09 51.3 2.9 32 43-74 2-33 (62)
99 2yun_A Nostrin; nitric oxide s 97.2 0.00028 9.7E-09 52.8 3.8 34 41-74 4-37 (79)
100 2ecz_A Sorbin and SH3 domain-c 97.2 0.00019 6.4E-09 52.5 2.7 33 42-74 5-37 (70)
101 4glm_A Dynamin-binding protein 97.2 0.00021 7.3E-09 52.1 3.1 34 41-74 10-43 (72)
102 3h0h_A Proto-oncogene tyrosine 97.2 0.00022 7.4E-09 52.4 3.1 33 42-74 13-45 (73)
103 2da9_A SH3-domain kinase bindi 97.2 0.00026 8.7E-09 51.8 3.4 32 43-74 6-37 (70)
104 2epd_A RHO GTPase-activating p 97.2 0.0002 6.7E-09 53.6 2.8 32 43-74 9-40 (76)
105 2v1r_A Peroxisomal membrane pr 97.2 0.0002 6.9E-09 53.6 2.8 33 42-74 12-45 (80)
106 1wi7_A SH3-domain kinase bindi 97.2 0.00018 6.3E-09 52.3 2.5 32 43-74 6-37 (68)
107 1nm7_A Peroxisomal membrane pr 97.1 0.00021 7.1E-09 53.5 2.8 31 44-74 7-38 (69)
108 1uhc_A KIAA1010 protein; beta 97.1 0.00019 6.5E-09 53.9 2.6 31 44-74 13-43 (79)
109 2kgt_A Tyrosine-protein kinase 97.1 0.00021 7.1E-09 52.5 2.8 32 42-74 8-39 (72)
110 2j6f_A CD2-associated protein; 97.1 0.0002 6.8E-09 51.3 2.6 30 45-74 2-31 (62)
111 3eg3_A Proto-oncogene tyrosine 97.1 0.00024 8.3E-09 50.5 3.0 31 43-73 4-34 (63)
112 2yuo_A CIP85, RUN and TBC1 dom 97.1 0.00034 1.1E-08 52.3 3.9 33 42-74 5-37 (78)
113 2jw4_A Cytoplasmic protein NCK 97.1 0.00022 7.4E-09 52.8 2.8 32 43-74 6-37 (72)
114 2bz8_A SH3-domain kinase bindi 97.1 0.00022 7.6E-09 50.3 2.7 30 45-74 2-31 (58)
115 1uff_A Intersectin 2; beta bar 97.1 0.00022 7.5E-09 55.4 2.9 32 43-74 4-35 (93)
116 2o9s_A Ponsin; SH3 domain, sig 97.1 0.00028 9.5E-09 51.2 3.3 31 44-74 6-36 (67)
117 1x43_A Endophilin B1, SH3 doma 97.1 0.00032 1.1E-08 52.9 3.8 33 42-74 15-47 (81)
118 2oi3_A Tyrosine-protein kinase 97.1 0.00029 9.9E-09 53.4 3.5 33 42-74 23-55 (86)
119 1u5s_A Cytoplasmic protein NCK 97.1 0.00027 9.3E-09 51.7 3.2 33 42-74 4-36 (71)
120 4e6r_A Cytoplasmic protein NCK 97.1 0.0003 1E-08 49.2 3.3 30 45-74 2-31 (58)
121 4esr_A Jouberin; AHI-1, AHI1, 97.1 0.00027 9.2E-09 51.5 3.1 30 45-74 7-36 (69)
122 2jt4_A Cytoskeleton assembly c 97.1 0.00034 1.2E-08 51.1 3.7 33 42-74 4-36 (71)
123 1csk_A C-SRC SH3 domain; phosp 97.1 0.00029 9.9E-09 51.7 3.3 32 42-73 9-40 (71)
124 1neg_A Spectrin alpha chain, b 97.1 0.00026 8.8E-09 54.6 3.1 34 41-74 14-47 (83)
125 2ed0_A ABL interactor 2; coile 97.1 0.00027 9.3E-09 53.0 3.2 31 44-74 17-47 (78)
126 2ct3_A Vinexin; SH3 domian, st 97.1 0.00032 1.1E-08 51.0 3.5 33 42-74 5-37 (70)
127 2vkn_A Protein SSU81; membrane 97.1 0.00031 1.1E-08 51.4 3.4 32 43-74 4-37 (70)
128 1wxu_A Peroxisomal biogenesis 97.1 0.00023 8E-09 55.1 2.8 33 42-74 15-47 (93)
129 2a28_A BZZ1 protein; SH3 domai 97.1 0.0003 1E-08 48.9 3.1 29 46-74 2-30 (54)
130 2dl5_A KIAA0769 protein; SH3 d 97.1 0.00028 9.6E-09 52.9 3.1 32 43-74 12-43 (78)
131 2dil_A Proline-serine-threonin 97.1 0.00027 9.3E-09 51.5 2.9 32 43-74 7-38 (69)
132 2kym_A BUD emergence protein 1 97.1 0.00026 8.8E-09 57.9 3.1 31 44-74 3-33 (120)
133 1zuu_A BZZ1 protein; SH3 domai 97.1 0.0002 6.8E-09 50.3 2.1 30 45-74 2-31 (58)
134 1jqq_A PEX13P, peroxisomal mem 97.1 0.00035 1.2E-08 53.8 3.6 34 41-74 11-45 (92)
135 2kxc_A Brain-specific angiogen 97.1 0.00036 1.2E-08 50.6 3.5 33 42-74 4-37 (67)
136 3ngp_A Spectrin alpha chain, b 97.1 0.00033 1.1E-08 49.6 3.2 31 44-74 6-36 (62)
137 1aww_A ATK, AMGX1, BPK, bruton 97.1 0.00028 9.6E-09 51.2 2.9 32 43-74 7-38 (67)
138 4f14_A Nebulette; SH3 domain, 97.1 0.00026 9E-09 50.3 2.7 31 44-74 6-36 (64)
139 2ct4_A CDC42-interacting prote 97.1 0.00034 1.1E-08 51.2 3.3 31 44-74 7-37 (70)
140 3thk_A Spectrin alpha chain, b 97.1 0.00033 1.1E-08 51.4 3.2 32 43-74 4-35 (73)
141 2e5k_A Suppressor of T-cell re 97.1 0.00037 1.3E-08 54.0 3.7 33 42-74 14-46 (94)
142 2j05_A RAS GTPase-activating p 97.1 0.00033 1.1E-08 50.6 3.1 30 45-74 6-36 (65)
143 1gl5_A Tyrosine-protein kinase 97.1 0.00028 9.6E-09 51.3 2.7 30 45-74 3-32 (67)
144 2pqh_A Spectrin alpha chain, b 97.0 0.00033 1.1E-08 52.8 3.1 30 45-74 3-32 (80)
145 1spk_A RSGI RUH-010, riken cDN 97.0 0.00037 1.3E-08 51.2 3.3 33 42-74 5-38 (72)
146 1wx6_A Cytoplasmic protein NCK 97.0 0.0004 1.4E-08 53.4 3.6 34 41-74 14-47 (91)
147 2ebp_A SAM and SH3 domain-cont 97.0 0.00038 1.3E-08 51.9 3.3 30 45-74 10-41 (73)
148 2m0y_A Dedicator of cytokinesi 97.0 0.00026 8.9E-09 52.1 2.3 32 43-74 10-41 (74)
149 3o5z_A Phosphatidylinositol 3- 97.0 0.0005 1.7E-08 53.3 4.0 33 41-73 8-40 (90)
150 1wie_A RIM binding protein 2; 97.0 0.00031 1.1E-08 55.0 2.8 34 41-74 14-54 (96)
151 2lcs_A NAP1-binding protein 2; 97.0 0.00037 1.3E-08 52.0 3.1 30 45-74 6-35 (73)
152 1x6g_A Megakaryocyte-associate 97.0 0.00039 1.3E-08 52.7 3.2 31 44-74 17-47 (81)
153 2fpf_A C-JUN-amino-terminal ki 97.0 0.00033 1.1E-08 51.5 2.7 31 44-74 6-36 (71)
154 2cuc_A SH3 domain containing r 97.0 0.00037 1.3E-08 50.8 2.8 32 43-74 6-37 (70)
155 1uhf_A Intersectin 2; beta bar 97.0 0.00036 1.2E-08 51.2 2.8 32 43-74 7-38 (69)
156 1x6b_A RHO guanine exchange fa 97.0 0.00038 1.3E-08 52.3 3.0 34 41-74 14-47 (79)
157 2egc_A SH3 and PX domain-conta 97.0 0.00041 1.4E-08 51.7 3.1 31 43-74 9-39 (75)
158 2cub_A Cytoplasmic protein NCK 97.0 0.00038 1.3E-08 53.6 2.9 32 43-74 16-47 (88)
159 1x2p_A Protein arginine N-meth 97.0 0.00043 1.5E-08 50.3 3.0 32 43-74 6-37 (68)
160 1udl_A Intersectin 2, KIAA1256 97.0 0.00049 1.7E-08 53.8 3.5 33 42-74 32-64 (98)
161 1bb9_A Amphiphysin 2; transfer 97.0 0.00052 1.8E-08 55.9 3.7 33 41-73 41-73 (115)
162 3cqt_A P59-FYN, proto-oncogene 97.0 0.00039 1.3E-08 52.6 2.8 30 45-74 6-35 (79)
163 3i5r_A Phosphatidylinositol 3- 96.9 0.00056 1.9E-08 51.8 3.6 32 42-73 3-34 (83)
164 2rf0_A Mitogen-activated prote 96.9 0.00045 1.6E-08 53.8 3.1 33 42-74 27-59 (89)
165 2jxb_A T-cell surface glycopro 96.9 0.00039 1.3E-08 53.3 2.6 32 43-74 30-61 (86)
166 2gqi_A RAS GTPase-activating p 96.9 0.00032 1.1E-08 51.7 2.0 32 43-74 6-38 (71)
167 2dnu_A RUH-061, SH3 multiple d 96.9 0.00049 1.7E-08 50.3 3.0 32 43-74 7-38 (71)
168 2csq_A RIM-BP2, RIM binding pr 96.9 0.00041 1.4E-08 54.3 2.8 33 42-74 15-55 (97)
169 1awj_A ITK; transferase, regul 96.9 0.00019 6.3E-09 53.7 0.6 33 42-74 18-50 (77)
170 1hsq_A Phospholipase C-gamma ( 96.9 0.0002 6.8E-09 52.7 0.8 32 43-74 5-36 (71)
171 3reb_B Tyrosine-protein kinase 96.9 0.00054 1.8E-08 52.5 3.1 30 45-74 4-33 (90)
172 1zuy_A Myosin-5 isoform; SH3 d 96.9 0.00062 2.1E-08 47.6 3.1 29 46-74 2-31 (58)
173 1z9q_A Neutrophil cytosol fact 96.8 0.00036 1.2E-08 53.4 1.8 34 41-74 15-48 (79)
174 2yt6_A Adult MALE urinary blad 96.8 0.0007 2.4E-08 53.5 3.5 34 41-74 24-57 (109)
175 2yup_A Vinexin; sorbin and SH3 96.8 0.00068 2.3E-08 52.1 3.3 32 43-74 16-47 (90)
176 4ag1_C Fynomer; hydrolase-de n 96.8 0.00059 2E-08 52.2 2.9 31 44-74 6-36 (84)
177 1ruw_A Myosin-3 isoform, MYO3; 96.8 0.00071 2.4E-08 49.3 3.1 29 46-74 4-33 (69)
178 1i1j_A Melanoma derived growth 96.8 0.00067 2.3E-08 54.9 3.3 32 43-74 21-52 (108)
179 2j41_A Guanylate kinase; GMP, 96.8 0.0022 7.7E-08 53.7 6.6 88 90-188 85-188 (207)
180 2o2o_A SH3-domain kinase-bindi 96.8 0.00068 2.3E-08 53.1 3.1 33 42-74 16-48 (92)
181 1s1n_A Nephrocystin 1; beta ba 96.8 0.00072 2.4E-08 49.0 3.0 32 43-74 9-40 (68)
182 1gri_A Growth factor bound pro 96.8 0.0018 6.3E-08 56.3 6.1 32 43-74 157-188 (217)
183 2ekh_A SH3 and PX domain-conta 96.7 0.00087 3E-08 50.6 3.2 32 43-74 7-38 (80)
184 2rqr_A CED-12 homolog, engulfm 96.7 0.00082 2.8E-08 54.9 3.0 32 43-74 58-89 (119)
185 2ega_A SH3 and PX domain-conta 96.6 0.00076 2.6E-08 49.2 2.1 32 43-74 7-38 (70)
186 2kxd_A 11-MER peptide, SH3 dom 96.6 0.00063 2.2E-08 50.3 1.7 28 46-74 2-29 (73)
187 1mv3_A MYC box dependent inter 96.5 0.0016 5.4E-08 58.9 3.9 33 41-73 139-171 (213)
188 4d8k_A Tyrosine-protein kinase 96.4 0.0015 5.2E-08 55.6 3.2 32 43-74 11-42 (175)
189 2kbt_A Chimera of proto-oncoge 96.3 0.0023 7.8E-08 53.9 3.3 33 42-74 3-35 (142)
190 3qwx_X Cell death abnormality 96.2 0.0023 7.7E-08 54.5 3.1 32 43-74 117-148 (174)
191 3jv3_A Intersectin-1; SH3 doma 95.7 0.0058 2E-07 54.8 3.4 31 44-74 2-32 (283)
192 3a98_A DOCK2, dedicator of cyt 95.6 0.0058 2E-07 53.2 3.0 32 43-74 16-47 (184)
193 1ng2_A Neutrophil cytosolic fa 95.2 0.0089 3E-07 52.0 2.9 32 43-74 10-41 (193)
194 2dvj_A V-CRK sarcoma virus CT1 95.2 0.0043 1.5E-07 55.4 0.8 32 43-74 135-166 (230)
195 1u3o_A Huntingtin-associated p 95.1 0.012 4E-07 46.2 2.8 32 42-74 16-47 (82)
196 1k1z_A VAV; SH3, proto-oncogen 95.0 0.01 3.5E-07 44.1 2.3 32 43-74 14-48 (78)
197 3qwy_A Cell death abnormality 95.0 0.012 4.1E-07 54.5 3.1 32 43-74 146-177 (308)
198 1gri_A Growth factor bound pro 94.8 0.013 4.4E-07 50.9 2.7 29 46-74 2-30 (217)
199 2pz1_A RHO guanine nucleotide 94.8 0.017 5.7E-07 56.0 3.7 34 41-74 27-60 (466)
200 1ng2_A Neutrophil cytosolic fa 94.8 0.018 6.1E-07 50.1 3.5 32 43-74 80-111 (193)
201 2eyz_A V-CRK sarcoma virus CT1 94.8 0.014 4.9E-07 54.1 3.1 32 43-74 133-164 (304)
202 1fmk_A C-SRC, P60-SRC, tyrosin 94.4 0.021 7.1E-07 54.6 3.3 29 46-74 4-32 (452)
203 2h8h_A Proto-oncogene tyrosine 94.4 0.018 6.1E-07 56.6 2.7 32 43-74 84-115 (535)
204 1k9a_A Carboxyl-terminal SRC k 94.2 0.022 7.5E-07 54.4 3.0 33 42-74 9-41 (450)
205 1opk_A P150, C-ABL, proto-onco 94.2 0.023 7.9E-07 55.1 3.1 33 42-74 41-73 (495)
206 2dyb_A Neutrophil cytosol fact 94.2 0.023 8E-07 53.5 3.0 31 44-74 174-204 (341)
207 1qcf_A Haematopoetic cell kina 94.2 0.025 8.5E-07 54.0 3.2 33 42-74 6-38 (454)
208 2lqn_A CRK-like protein; SH2, 92.8 0.012 4E-07 54.7 0.0 32 43-74 124-155 (303)
209 1gcq_C VAV proto-oncogene; SH3 93.3 0.054 1.8E-06 39.1 3.0 17 58-74 24-40 (70)
210 3haj_A Human pacsin2 F-BAR; pa 92.9 0.018 6.3E-07 56.7 0.0 31 44-74 428-458 (486)
211 2eyz_A V-CRK sarcoma virus CT1 92.7 0.031 1.1E-06 51.8 1.2 32 43-74 236-269 (304)
212 2lqn_A CRK-like protein; SH2, 91.2 0.029 1E-06 52.0 0.0 32 43-74 236-269 (303)
213 2de0_X Alpha-(1,6)-fucosyltran 91.4 0.088 3E-06 53.1 2.9 30 45-74 443-472 (526)
214 3pvl_A Myosin VIIA isoform 1; 91.2 0.078 2.7E-06 54.7 2.3 34 41-74 570-606 (655)
215 3ehr_A Osteoclast-stimulating 89.2 0.25 8.5E-06 41.4 3.3 34 41-74 11-44 (222)
216 1v1c_A Obscurin; muscle, sarco 84.6 0.57 1.9E-05 35.7 2.7 27 48-74 9-37 (71)
217 3qwy_A Cell death abnormality 84.5 0.19 6.5E-06 46.4 0.0 31 44-74 247-279 (308)
218 1gvn_B Zeta; postsegregational 82.0 0.78 2.7E-05 41.8 3.1 72 91-162 99-207 (287)
219 2jmc_A Spectrin alpha chain, b 81.5 0.6 2.1E-05 34.4 1.8 19 56-74 3-21 (77)
220 3tsv_A Tight junction protein 80.8 1.9 6.6E-05 34.5 4.7 40 2-41 82-123 (124)
221 1tuc_A Alpha-spectrin; capping 80.6 0.71 2.4E-05 32.7 1.8 18 57-74 2-19 (63)
222 1r6j_A Syntenin 1; PDZ, membra 79.9 1.3 4.6E-05 33.6 3.3 27 2-28 54-80 (82)
223 2jmc_A Spectrin alpha chain, b 76.2 1.3 4.4E-05 32.6 2.1 23 44-66 52-74 (77)
224 3i4w_A Disks large homolog 4; 75.9 4.1 0.00014 30.7 5.0 35 2-36 67-101 (104)
225 1um7_A Synapse-associated prot 75.1 4.7 0.00016 30.8 5.2 37 2-38 71-107 (113)
226 1znw_A Guanylate kinase, GMP k 74.6 2.9 0.0001 35.3 4.2 75 90-164 100-190 (207)
227 1ri9_A FYN-binding protein; SH 68.8 1.7 6E-05 35.2 1.4 17 58-74 55-71 (102)
228 2gtj_A FYN-binding protein; SH 67.8 2.2 7.7E-05 34.1 1.8 42 32-74 14-57 (96)
229 1ycs_B 53BP2, P53BP2; ankyrin 61.0 5.7 0.00019 33.7 3.3 33 42-74 168-200 (239)
230 4e34_A Golgi-associated PDZ an 57.6 9.3 0.00032 27.7 3.5 27 2-28 60-86 (87)
231 3e17_A Tight junction protein 57.5 7 0.00024 29.0 2.9 30 2-31 53-82 (88)
232 3gge_A PDZ domain-containing p 52.7 9.4 0.00032 30.1 3.0 26 2-27 60-87 (95)
233 2dc2_A GOPC, golgi associated 50.6 13 0.00046 28.1 3.5 30 2-31 67-96 (103)
234 1tp5_A Presynaptic density pro 48.2 18 0.0006 27.9 3.9 35 2-36 70-104 (119)
235 2daz_A INAD-like protein; PDZ 47.1 19 0.00064 28.2 4.0 34 2-35 83-116 (124)
236 3soe_A Membrane-associated gua 46.2 17 0.00057 29.2 3.6 30 2-31 63-94 (113)
237 1qhx_A CPT, protein (chloramph 44.9 67 0.0023 25.5 7.1 69 93-163 77-164 (178)
238 3lw7_A Adenylate kinase relate 43.4 22 0.00074 27.6 3.8 82 94-186 68-176 (179)
239 1knq_A Gluconate kinase; ALFA/ 43.4 1E+02 0.0034 24.5 8.0 48 96-143 74-124 (175)
240 1wha_A KIAA0147 protein, scrib 43.2 25 0.00087 26.4 4.1 30 2-31 70-99 (105)
241 2db5_A INAD-like protein; PDZ 41.3 25 0.00086 27.5 3.9 30 2-31 86-116 (128)
242 3pe0_A Plectin; cytoskeleton, 40.9 13 0.00046 33.9 2.5 29 43-74 197-225 (283)
243 3t61_A Gluconokinase; PSI-biol 40.7 75 0.0026 26.0 7.0 53 91-143 75-131 (202)
244 1uf9_A TT1252 protein; P-loop, 39.2 48 0.0017 26.8 5.5 74 102-187 106-194 (203)
245 3o46_A Maguk P55 subfamily mem 38.7 22 0.00075 26.1 3.0 29 2-30 60-88 (93)
246 4eun_A Thermoresistant glucoki 37.9 97 0.0033 25.5 7.3 79 98-186 97-193 (200)
247 2f6r_A COA synthase, bifunctio 37.8 58 0.002 29.0 6.2 72 102-186 181-268 (281)
248 2grj_A Dephospho-COA kinase; T 36.4 58 0.002 27.6 5.7 73 102-187 111-187 (192)
249 1uhp_A Hypothetical protein KI 35.1 31 0.001 26.1 3.4 30 2-31 73-102 (107)
250 2rhm_A Putative kinase; P-loop 34.7 31 0.0011 27.7 3.6 47 94-140 69-122 (193)
251 4i1u_A Dephospho-COA kinase; s 34.7 32 0.0011 30.3 3.8 73 102-186 112-201 (210)
252 1um1_A KIAA1849 protein, RSGI 34.5 73 0.0025 23.9 5.5 32 2-33 68-99 (110)
253 2d9i_A NEDD4-binding protein 2 33.4 14 0.00047 28.3 1.1 15 1-15 11-25 (96)
254 2lnd_A De novo designed protei 33.2 67 0.0023 25.3 5.0 93 66-188 2-103 (112)
255 2dkr_A LIN-7 homolog B; LIN-7B 32.5 27 0.00091 25.4 2.5 30 2-31 62-91 (93)
256 1z87_A Alpha-1-syntrophin; pro 32.2 24 0.00082 32.2 2.7 31 1-31 134-164 (263)
257 3axa_A Afadin, nectin-3, prote 31.9 31 0.0011 25.9 2.9 30 2-31 70-99 (106)
258 2c95_A Adenylate kinase 1; tra 31.8 41 0.0014 27.0 3.9 50 94-143 80-133 (196)
259 1uit_A Human discs large 5 pro 31.1 8.8 0.0003 29.7 -0.4 35 2-36 73-107 (117)
260 3fau_A NEDD4-binding protein 2 30.8 16 0.00056 27.1 1.1 15 1-15 3-17 (82)
261 4amh_A Disks large homolog 1; 30.5 48 0.0016 25.1 3.8 29 2-30 64-92 (106)
262 2csj_A TJP2 protein; PDZ domai 30.3 42 0.0014 25.8 3.5 29 2-30 76-104 (117)
263 2dlu_A INAD-like protein; PDZ 30.0 41 0.0014 25.4 3.4 30 2-31 70-99 (111)
264 3cbz_A Dishevelled-2; PDZ doma 29.3 30 0.001 26.5 2.4 29 2-30 65-96 (108)
265 1qav_A Alpha-1 syntrophin (res 28.9 61 0.0021 23.4 4.0 27 2-28 62-88 (90)
266 1v62_A KIAA1719 protein; struc 28.7 37 0.0013 26.3 2.9 29 2-30 74-102 (117)
267 2edv_A FERM and PDZ domain-con 28.3 64 0.0022 23.9 4.1 29 2-30 61-89 (96)
268 1d5g_A Human phosphatase HPTP1 28.2 56 0.0019 23.9 3.7 28 2-29 65-92 (96)
269 2kv8_A RGS12, regulator of G-p 28.2 55 0.0019 23.3 3.6 28 2-29 54-81 (83)
270 1kwa_A Hcask/LIN-2 protein; PD 28.1 30 0.001 25.4 2.2 27 2-28 57-83 (88)
271 2zqe_A MUTS2 protein; alpha/be 26.7 22 0.00074 26.9 1.2 29 1-29 7-41 (83)
272 1v6b_A Harmonin isoform A1; st 26.5 40 0.0014 26.2 2.8 29 2-30 75-107 (118)
273 1ufx_A KIAA1526 protein; PDZ d 26.2 32 0.0011 26.2 2.1 27 2-28 64-95 (103)
274 3hpk_A Protein interacting wit 26.2 54 0.0019 25.4 3.5 27 2-28 77-103 (125)
275 2vli_A Antibiotic resistance p 26.0 68 0.0023 25.5 4.1 51 93-143 67-125 (183)
276 2f5y_A Regulator of G-protein 25.8 69 0.0024 23.3 3.8 30 2-31 55-84 (91)
277 2xb4_A Adenylate kinase; ATP-b 25.5 75 0.0026 26.9 4.5 52 93-144 66-127 (223)
278 2jik_A Synaptojanin-2 binding 25.2 54 0.0018 24.2 3.2 29 2-30 69-97 (101)
279 2dmz_A INAD-like protein; PDZ 24.9 62 0.0021 25.1 3.6 29 2-30 78-106 (129)
280 1wf8_A Neurabin-I; PDZ domain, 24.6 54 0.0019 24.6 3.1 29 2-30 72-100 (107)
281 4eaq_A DTMP kinase, thymidylat 24.6 1E+02 0.0035 26.5 5.3 49 95-143 102-169 (229)
282 2if2_A Dephospho-COA kinase; a 24.6 1.3E+02 0.0045 24.4 5.8 77 103-191 106-196 (204)
283 1uju_A Scribble; PDZ domain, c 24.4 38 0.0013 25.7 2.2 28 2-29 76-103 (111)
284 2la8_A Inactivation-NO-after-p 24.1 73 0.0025 24.3 3.8 28 2-29 57-84 (106)
285 2guz_B Mitochondrial import in 24.1 4.5 0.00015 29.8 -3.1 43 6-48 1-46 (65)
286 1nn5_A Similar to deoxythymidy 24.0 85 0.0029 25.5 4.5 48 93-140 84-147 (215)
287 2qg1_A Multiple PDZ domain pro 23.6 70 0.0024 23.1 3.5 28 2-29 61-88 (92)
288 1ly1_A Polynucleotide kinase; 23.6 66 0.0023 25.3 3.6 51 93-143 66-126 (181)
289 2eno_A Synaptojanin-2-binding 23.4 33 0.0011 26.5 1.7 30 2-31 79-108 (120)
290 1mfg_A ERB-B2 interacting prot 23.3 53 0.0018 24.0 2.8 28 2-29 65-92 (95)
291 2jil_A GRIP1 protein, glutamat 23.3 53 0.0018 24.0 2.8 29 2-30 64-92 (97)
292 1ueq_A Membrane associated gua 23.1 69 0.0024 24.8 3.5 29 2-30 76-106 (123)
293 2g5m_B Neurabin-2; spinophilin 22.9 66 0.0022 24.3 3.3 30 2-31 67-96 (113)
294 2opg_A Multiple PDZ domain pro 22.8 62 0.0021 23.7 3.1 29 2-30 62-90 (98)
295 1ujv_A Membrane associated gua 22.8 70 0.0024 23.8 3.4 28 2-29 61-90 (96)
296 2i1n_A Discs, large homolog 3; 22.6 63 0.0022 23.9 3.1 29 2-30 66-94 (102)
297 1n7e_A AMPA receptor interacti 22.5 84 0.0029 23.0 3.8 28 2-29 62-89 (97)
298 2awx_A Synapse associated prot 22.2 77 0.0026 23.7 3.6 30 2-31 65-94 (105)
299 2qkv_A Inactivation-NO-after-p 22.1 81 0.0028 23.2 3.6 28 2-29 63-90 (96)
300 1vht_A Dephospho-COA kinase; s 21.8 1.9E+02 0.0066 23.8 6.3 73 101-186 106-194 (218)
301 2dm8_A INAD-like protein; PDZ 21.6 51 0.0018 25.0 2.5 30 2-31 75-104 (116)
302 2he4_A Na(+)/H(+) exchange reg 21.1 87 0.003 22.5 3.6 28 2-29 59-86 (90)
303 2plr_A DTMP kinase, probable t 21.1 1.2E+02 0.0041 24.4 4.8 49 95-143 79-143 (213)
304 1rgw_A ZAsp protein; PDZ, cyph 20.8 94 0.0032 21.9 3.6 27 2-28 56-82 (85)
305 2vsp_A PDZ domain-containing p 20.8 86 0.0029 22.7 3.5 28 2-29 58-85 (91)
306 3r68_A Na(+)/H(+) exchange reg 20.5 93 0.0032 22.5 3.6 28 2-29 60-87 (95)
307 2vkc_A NEDD4-binding protein 2 20.1 34 0.0012 28.0 1.2 15 1-15 56-70 (135)
308 3khf_A Microtubule-associated 20.1 83 0.0028 23.1 3.3 28 2-29 65-92 (99)
No 1
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=100.00 E-value=2.6e-37 Score=307.49 Aligned_cols=200 Identities=39% Similarity=0.635 Sum_probs=158.6
Q ss_pred CCCCCCHHHHHHHHhc--CCCcEEEEEEeChhHHHHHHhccCCCeeEEEeccccCCCCCCCcceeeCCeeEeccc-cc--
Q psy9828 2 DMKGITREEAVLFLLS--LQDQIHLIVQNRRDEYEHVVASQRGDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL-EN-- 76 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~--~~~~VtL~vq~~~~~Y~~i~~~~~gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT-~~-- 76 (311)
+++++|++||+.+|+. .++.|+|+++.+.+.|.+++....+++|||||+|||++..+.+|+|++||||||+|+ |+
T Consensus 54 ~v~~~t~~e~~~~L~~~~~g~~v~L~V~r~g~~~~~~~~~~~g~s~yVralfdy~~~~~~~LsF~~GDIL~V~d~~~~~d 133 (468)
T 3shw_A 54 DFTNIIREEAVLFLLDLPKGEEVTILAQKKKDVYRRIVESDVGDSFYIRTHFEYEKESPYGLSFNKGEVFRVVDTLYNGK 133 (468)
T ss_dssp ECTTCCHHHHHHHHHHSCTTSEEEEEEEECHHHHHHHHHHTCCCCEEEEECSCBCCSSTTBCCBCTTCEEEEEESSGGGC
T ss_pred ECCCCCHHHHHHHHHhcCCCCEEEEEEEECCccchhhhccccccccccccccCcCCCCCCCceEccCCEEEEeecccCCC
Confidence 5788999999999988 679999999999999999998888999999999999999999999999999999999 43
Q ss_pred -------------------c------------c-----------------------------------------------
Q psy9828 77 -------------------M------------M----------------------------------------------- 78 (311)
Q Consensus 77 -------------------m------------m----------------------------------------------- 78 (311)
+ +
T Consensus 134 ~~wW~A~~~~~~~~~~~~GlIPs~~~~e~~~~~~~~~~~~~~~~~~~f~~~~~~r~~kk~~~~~~~~~~~~~~~~~~~~Y 213 (468)
T 3shw_A 134 LGSWLAIRIGKNHKEVERGIIPNKNRAEQLASVQYTLPKTAGGDRADFWRFRGLRSSKRNLRKSREDLSAQPVQTKFPAY 213 (468)
T ss_dssp TTEEEEEEECTTSCEEEEEEEECHHHHHHHHHHHHC-------------------------------------CCCCCSE
T ss_pred CCeEEEEEcCCCCcccccceecCHHHHHHHHHHhhhhhccccccccchhhhccccccccccccchhhcccccccccCCCc
Confidence 0 0
Q ss_pred c------cc-----------------------cc------------c---CCCCccchHHHHHHHhcCCEEEEecCcccc
Q psy9828 79 E------ES-----------------------DS------------K---KCSGIIRLSAIRDMMDRGRHGLLDITPNAV 114 (311)
Q Consensus 79 E------~~-----------------------~~------------~---~~~nlTSl~AVr~ViekGKhCILDV~pqaV 114 (311)
| .. .. + ...+.|++++|++++++||||||||++||+
T Consensus 214 EeV~~~~~~~~r~iVlsGPsG~Gl~~~Ll~~~p~~f~s~~TRpR~gE~dG~~Y~FTs~~~V~~vl~~Gk~~iLdId~qg~ 293 (468)
T 3shw_A 214 ERVVLREAGFLRPVTIFGPIADVAREKLAREEPDIYQIAKSEPRDAGTDQRSSGIIRLHTIKQIIDQDKHALLDVTPNAV 293 (468)
T ss_dssp EEEEEECCSSCCCEEEESTTHHHHHHHHHHHCTTTEEECCCBC----------CBCCHHHHHHHHTTTCEEEECCCHHHH
T ss_pred ceeEcccCCCCCEEEEECCCHHHHHHHHHHhCCCceeeecCCCCCcccccccCCcccHHHHHHHHHCCCeEEEEeCHHHH
Confidence 0 00 00 0 012349999999999999999999999999
Q ss_pred ccccccCcccEEEEEcCCCHHHHHHHHccCCc---c--------------cCCCcceEEEecCCcc-chhhhhhccccHH
Q psy9828 115 DRLNYAQFYPIVIFLRAETKSNVKELRAGIPK---L--------------NSAQFFSVVIFLRAET-KSNVKELRAGIPN 176 (311)
Q Consensus 115 krL~~a~l~PIVIFIkPpS~e~LKeLR~~l~e---~--------------~~~hlFd~vI~nddl~-~~~~~~~~~~~~~ 176 (311)
++|+.++++|++|||+|||++.|+++|+++.. + .|+|+||.+|+|++++ . |
T Consensus 294 ~~l~~~~~~p~~IFI~PPS~e~L~~~~~rl~~~see~~~r~~~~a~~~e~~~~~~fD~vIvNddl~d~-----------a 362 (468)
T 3shw_A 294 DRLNYAQWYPIVVFLNPDSKQGVKTMRMRLCPESRKSARKLYERSHKLRKNNHHLFTTTINLNSMNDG-----------W 362 (468)
T ss_dssp HHHHHTTCCCEEEEEECSCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHHGGGCSEEEECBTTBCH-----------H
T ss_pred HHHHhcCCCCEEEEEeCcCHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHhhhccCCEEEECCCcHHH-----------H
Confidence 99999999999999999999999988777641 1 2689999999999995 7 9
Q ss_pred HHHHHHHHHhcCCCCeeE-----------------eeeccCCCCCCCc--ccccC
Q psy9828 177 YIKTISLINFNGSSPSQA-----------------IKFSANYDPSTKP--LRSVS 212 (311)
Q Consensus 177 y~~Lk~~I~~eQs~pvWV-----------------~~~~~~~~~~~~~--~~~~~ 212 (311)
|.+|+++|..+|++|+|| .||||+|+|+++| ++|++
T Consensus 363 ~~~L~~ii~~~~~~~~WvP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (468)
T 3shw_A 363 YGALKEAIQQQQNQLVWVSEGKADGATSDDLDLHDDRLSYLSAPGSEYSMYSTDS 417 (468)
T ss_dssp HHHHHHHHHHHHTSCEEEEC-----------------------------------
T ss_pred HHHHHHHHHHhcCCCEEeCCccccccccccccccccccccccCccccccceeecc
Confidence 999999999999999999 4667777777777 44443
No 2
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=100.00 E-value=1.7e-34 Score=280.26 Aligned_cols=184 Identities=41% Similarity=0.685 Sum_probs=159.2
Q ss_pred CCCCCCHHHHHHHHhc--CCCcEEEEEEeChhHHHHHHhccCCCeeEEEeccccCCCCCCCcceeeCCeeEeccc-cc--
Q psy9828 2 DMKGITREEAVLFLLS--LQDQIHLIVQNRRDEYEHVVASQRGDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL-EN-- 76 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~--~~~~VtL~vq~~~~~Y~~i~~~~~gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT-~~-- 76 (311)
++.++|++|++..|.. .++.|+|+++.+.+.|.+++....+++|||||+|||++..+.+|+|++||||||+|+ |+
T Consensus 62 ~v~~~~~~e~~~~l~~~~~g~~v~l~v~r~~~~~~~~~~~~~~~~~~vral~dy~~~~~~~Lsf~~Gdil~V~~~~~~~d 141 (391)
T 3tsz_A 62 DFTNIIREEAVLFLLDLPKGEEVTILAQKKKDVYRRIVESDVGDSFYIRTHFEYEKESPYGLSFNKGEVFRVVDTLYNGK 141 (391)
T ss_dssp ECTTCCHHHHHHHHHHSCTTSEEEEEEEECHHHHGGGTSSCCSCCEEEEECSCBCCSSTTBCCBCTTCEEEEEESSGGGS
T ss_pred ECCCCCHHHHHHHHHhhcCCCeEEEEEeeCCcccccccccccccccccccccccCCCCCCcceEccCCEEEEEeccCCCC
Confidence 5678999999999985 678999999999999999988778999999999999998899999999999999999 43
Q ss_pred -------------------c------------c-----------------------------------------------
Q psy9828 77 -------------------M------------M----------------------------------------------- 78 (311)
Q Consensus 77 -------------------m------------m----------------------------------------------- 78 (311)
+ +
T Consensus 142 ~~wW~a~~~~~~~~~~~~G~IPs~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~k~~~~~~~~~~~~~~~~Y 221 (391)
T 3tsz_A 142 LGSWLAIRIGKNHKEVERGIIPNKNRAEQLASVQYTLPKTAGGDRADFWRFRGLRSSKRNLRKSREDLSAQPVQTKFPAY 221 (391)
T ss_dssp SSEEEEEEECGGGCEEEEEEEECHHHHHHHHSSCCC---------------------------------------CCCSE
T ss_pred CCeEEEEEeCCCCCcccCCEecCHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCCCc
Confidence 0 0
Q ss_pred c------cc-----------------------------------cccCC---CCccchHHHHHHHhcCCEEEEecCcccc
Q psy9828 79 E------ES-----------------------------------DSKKC---SGIIRLSAIRDMMDRGRHGLLDITPNAV 114 (311)
Q Consensus 79 E------~~-----------------------------------~~~~~---~nlTSl~AVr~ViekGKhCILDV~pqaV 114 (311)
| .. ..+.. .+.+++++|++++++||||||||++||+
T Consensus 222 E~V~~~~~~~~r~iVlsGPsg~tl~~~L~~~~p~~~~~~tr~pR~gE~dG~~Y~Fv~~~~V~~~~~~Gk~~iLdId~qg~ 301 (391)
T 3tsz_A 222 ERVVLREAGFLRPVTIFGPIADVAREKLAREEPDIYQIAKSEPRDAGTDQRSSGIIRLHTIKQIIDQDKHALLDVTPNAV 301 (391)
T ss_dssp EEEEEEECSSCCCEEEESTTHHHHHHHHHHHCTTTEEECCCCCCCSSSCCC--CCCCHHHHHHHHTTTCEEEECCCHHHH
T ss_pred ceEECcCCCCCCEEEEECCCHHHHHHHHHhhCccccccccCCCCCcccCCccCCcCcHHHHHHHHHcCCEEEEEeCHHHH
Confidence 0 00 00111 1237999999999999999999999999
Q ss_pred ccccccCcccEEEEEcCCCHHHHHHHHccCC-cc----------------cCCCcceEEEecCCcc-chhhhhhccccHH
Q psy9828 115 DRLNYAQFYPIVIFLRAETKSNVKELRAGIP-KL----------------NSAQFFSVVIFLRAET-KSNVKELRAGIPN 176 (311)
Q Consensus 115 krL~~a~l~PIVIFIkPpS~e~LKeLR~~l~-e~----------------~~~hlFd~vI~nddl~-~~~~~~~~~~~~~ 176 (311)
++|+.++++|++|||+|||++.|+++|+++. ++ .|+|+||.+|+||+++ . |
T Consensus 302 ~~l~~~~~~p~~IFI~PPS~~~L~~~~~r~~~~s~e~~~~~~~~a~~~e~~~~~~fd~vivNd~l~~~-----------a 370 (391)
T 3tsz_A 302 DRLNYAQWYPIVVFLNPDSKQGVKTMRMRLCPESRKSARKLYERSHKLRKNNHHLFTTTINLNSMNDG-----------W 370 (391)
T ss_dssp HHHHHTTCCCEEEEEECCCHHHHHHHHHHHCSSCCCCHHHHHHHHHHHHHHHGGGCSEEEECCTTCCH-----------H
T ss_pred HHHHhCCCCCEEEEEeCcCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHhccccCcEEEECCCcHHH-----------H
Confidence 9999999999999999999999998877764 11 1689999999999998 6 8
Q ss_pred HHHHHHHHHhcCCCCeeEee
Q psy9828 177 YIKTISLINFNGSSPSQAIK 196 (311)
Q Consensus 177 y~~Lk~~I~~eQs~pvWV~~ 196 (311)
|.+|+++|..+|++|+|||.
T Consensus 371 ~~~l~~ii~~~~~~~~Wvp~ 390 (391)
T 3tsz_A 371 YGALKEAIQQQQNQLVWVSE 390 (391)
T ss_dssp HHHHHHHHHHHHHSEEEEEC
T ss_pred HHHHHHHHHHhcCCCeeccC
Confidence 99999999999999999984
No 3
>3kfv_A Tight junction protein ZO-3; structural genomics consortium, SGC, cell junction, cell membrane, membrane, SH3 domain; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.2e-33 Score=265.59 Aligned_cols=100 Identities=32% Similarity=0.589 Sum_probs=89.7
Q ss_pred CCccchHHHHHHHhcCCEEEEecCccccccccccCcccEEEEEcCCCHHHHHHHHccCC-cc----------------cC
Q psy9828 87 SGIIRLSAIRDMMDRGRHGLLDITPNAVDRLNYAQFYPIVIFLRAETKSNVKELRAGIP-KL----------------NS 149 (311)
Q Consensus 87 ~nlTSl~AVr~ViekGKhCILDV~pqaVkrL~~a~l~PIVIFIkPpS~e~LKeLR~~l~-e~----------------~~ 149 (311)
+..+++++|++++++||+|||||++||+++|+.+.++|++|||.|||++.|+++|++++ ++ .|
T Consensus 183 ~~fis~~~V~~vl~~Gk~~ILDId~QGa~~lk~~~~~pi~IFI~PPS~eeL~~rr~R~~~esee~~~r~~~aa~eiE~~~ 262 (308)
T 3kfv_A 183 SKIIKLDTVRVIAEKDKHALLDVTPSAIERLNYVQYYPIVVFFIPESRPALKALRQWLAPASRRSTRRLYAQAQKLRKHS 262 (308)
T ss_dssp --CCCHHHHHHHHHTTCEEEECCCHHHHHHHHHTTCCCEEEEEEESCHHHHHHHHHHHSTTCCCCHHHHHHHHHHHHHHH
T ss_pred CCeecHHHHHHHHHCCCcEEEEECHHHHHHHHhcCCCCEEEEEeCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHhh
Confidence 34589999999999999999999999999999999999999999999999999877754 11 16
Q ss_pred CCcceEEE-ecCCccchhhhhhccccHHHHHHHHHHHhcCCCCeeEeee
Q psy9828 150 AQFFSVVI-FLRAETKSNVKELRAGIPNYIKTISLINFNGSSPSQAIKF 197 (311)
Q Consensus 150 ~hlFd~vI-~nddl~~~~~~~~~~~~~~y~~Lk~~I~~eQs~pvWV~~~ 197 (311)
+++||.+| +||+++. ||.+|+++|..+|++|||||.-
T Consensus 263 ~~~FD~vI~VNDdle~-----------A~~~L~~iI~~~~~epqWvp~~ 300 (308)
T 3kfv_A 263 SHLFTATIPLNGTSDT-----------WYQELKAIIREQQTRPIWTAED 300 (308)
T ss_dssp GGGCSEEEEECSSSTH-----------HHHHHHHHHHHHTTSEEEEEC-
T ss_pred hccCcEEEEcCCCHHH-----------HHHHHHHHHHHhcCCCeEeehh
Confidence 89999999 9999999 9999999999999999999753
No 4
>3tvt_A Disks large 1 tumor suppressor protein; DLG, SRC-homology-3, guanylate kinase, phosphorylation-depen cell membrane; 1.60A {Drosophila melanogaster} PDB: 3uat_A*
Probab=100.00 E-value=1.7e-33 Score=264.73 Aligned_cols=102 Identities=22% Similarity=0.426 Sum_probs=92.5
Q ss_pred cCCCCc--cchHHHHHHHhcCCEEEEecCccccccccccCcccEEEEEcCCCHHHHHHHHccCCcc--------------
Q psy9828 84 KKCSGI--IRLSAIRDMMDRGRHGLLDITPNAVDRLNYAQFYPIVIFLRAETKSNVKELRAGIPKL-------------- 147 (311)
Q Consensus 84 ~~~~nl--TSl~AVr~ViekGKhCILDV~pqaVkrL~~a~l~PIVIFIkPpS~e~LKeLR~~l~e~-------------- 147 (311)
++.||+ |++++|++++++||||||||+++|+++|+...++|++|||+|||++.|++++.+.+++
T Consensus 169 ~~~gn~YGT~~~~V~~~~~~gk~viLdid~qg~~~lk~~~~~pi~IFI~PpS~e~L~~r~~~r~~e~~~~~~~r~~k~e~ 248 (292)
T 3tvt_A 169 QYNDNLYGTSVASVREVAEKGKHCILDVSGNAIKRLQVAQLYPVAVFIKPKSVDSVMEMNRRMTEEQAKKTYERAIKMEQ 248 (292)
T ss_dssp EETTEEEEEEHHHHHHHHHHTCEEEECCCTHHHHHHHHTTCCCEEEEECCSCHHHHHHTCTTSCTTHHHHHHHHHHHHHH
T ss_pred EEccceeEEehHHHHHHHHcCCcEEEeccchhhhhcccccccceEEEEECCCHHHHHHHHhCCCchhHHHHHHHHHHHHH
Confidence 345665 9999999999999999999999999999999999999999999999998876665533
Q ss_pred cCCCcceEEEecCCccchhhhhhccccHHHHHHHHHHHhcCCCCeeEee
Q psy9828 148 NSAQFFSVVIFLRAETKSNVKELRAGIPNYIKTISLINFNGSSPSQAIK 196 (311)
Q Consensus 148 ~~~hlFd~vI~nddl~~~~~~~~~~~~~~y~~Lk~~I~~eQs~pvWV~~ 196 (311)
+|+|+||.+|+|++++. +|.+|+++|..+|++|+|||.
T Consensus 249 e~~~~fD~vIvNddle~-----------a~~~l~~iI~~e~~~~~WVP~ 286 (292)
T 3tvt_A 249 EFGEYFTGVVQGDTIEE-----------IYSKVKSMIWSQSGPTIWVPS 286 (292)
T ss_dssp HHTTTCSEEECCSSHHH-----------HHHHHHHHHHHHTCSEEEEEC
T ss_pred hhhhhCCEEEECcCHHH-----------HHHHHHHHHHHhhCCCeEecC
Confidence 27999999999999999 999999999999999999974
No 5
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.97 E-value=1.9e-30 Score=267.63 Aligned_cols=183 Identities=28% Similarity=0.443 Sum_probs=156.7
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeChhHHHHHH-----------h-----------ccCCCeeEEEeccccCCCCCC
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNRRDEYEHVV-----------A-----------SQRGDSFHIKTHFNYDQPEKG 59 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~~~~Y~~i~-----------~-----------~~~gDSFYVRA~FDy~~~~~~ 59 (311)
+++++|++|++.+|++.++.|+|+++++++.|.++. + ..++++|||||+|||++..+.
T Consensus 363 ~v~~~~~~e~~~~l~~~~~~v~L~v~r~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~~~~~~~~~~~vrAl~dy~~~~d~ 442 (721)
T 2xkx_A 363 DLRNASHEQAAIALKNAGQTVTIIAQYKPEEYSRFEAKIHDLREQLMNSSLGSGTASLRSNPKRGFYIRALFDYDKTKDC 442 (721)
T ss_pred ECCCCCHHHHHHHHHhcCCeEEEEEEeCchhhhhhhhhhhhhhhhcccccccCCccccccccccceeEEEeeccCcCCCC
Confidence 578899999999999999999999999999886541 1 024689999999999998876
Q ss_pred C-----cceeeCCeeEecccc-c------------------c--------------------------------------
Q psy9828 60 E-----MSFRKGDVFHVIELE-N------------------M-------------------------------------- 77 (311)
Q Consensus 60 ~-----LsFkkGDILhViDT~-~------------------m-------------------------------------- 77 (311)
+ |+|++||||||+|+. + +
T Consensus 443 ~~p~~~LsF~~GDil~v~~~~~~~WW~a~~~~~~~~~~~~G~iPs~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~Ye~ 522 (721)
T 2xkx_A 443 GFLSQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKRRVERREWSRLKAKDWGSSSGSQGREDSVLSYET 522 (721)
T ss_pred CCccccccccCCCEEEEeecCCCCeEEEEECCCCCccCccceeecHHHHHHHHhhhcccccccCcchhhcccccCCCcee
Confidence 6 999999999999983 2 0
Q ss_pred ---c-----------------------c---------------------c---------c---------------cccCC
Q psy9828 78 ---M-----------------------E---------------------E---------S---------------DSKKC 86 (311)
Q Consensus 78 ---m-----------------------E---------------------~---------~---------------~~~~~ 86 (311)
| + . + ..++.
T Consensus 523 V~~~~~~~~r~vvl~GP~K~tl~~~L~~~~~~~~~~~vs~TTR~~r~gE~~G~dY~Fv~s~~~f~~~i~~~~flE~~~~~ 602 (721)
T 2xkx_A 523 VTQMEVHYARPIIILGPTKDRANDDLLSEFPDKFGSCVPHTTRPKREYEIDGRDYHFVSSREKMEKDIRAHKFIEAGQYN 602 (721)
T ss_pred eecccCCCCCEEEEECCCHHHHHHHHHHhCccceeecccccccCCCCCccCCceeEEecCHHHHHHHHhcCCceEEEEEC
Confidence 0 0 0 0 00334
Q ss_pred CCc--cchHHHHHHHhcCCEEEEecCccccccccccCcccEEEEEcCCCHHHHHHHHccCCcc--------------cCC
Q psy9828 87 SGI--IRLSAIRDMMDRGRHGLLDITPNAVDRLNYAQFYPIVIFLRAETKSNVKELRAGIPKL--------------NSA 150 (311)
Q Consensus 87 ~nl--TSl~AVr~ViekGKhCILDV~pqaVkrL~~a~l~PIVIFIkPpS~e~LKeLR~~l~e~--------------~~~ 150 (311)
||+ |++++|++++++||||||||+++++++|+..+++|++|||+|||++.|++|+.|.+++ .|.
T Consensus 603 g~~YGt~~~~v~~~~~~g~~~ildi~~~~~~~l~~~~~~p~~ifi~pps~~~L~~l~~R~t~~~~~~rl~~a~~~e~~~~ 682 (721)
T 2xkx_A 603 SHLYGTSVQSVREVAEQGKHCILDVSANAVRRLQAAHLHPIAIFIRPRSLENVLEINKRITEEQARKAFDRATKLEQEFT 682 (721)
T ss_pred CccceeeHHHHHHHHHCCCcEEEeCCHHHHHHHHhcccCCEEEEEeCCcHHHHHHHhccCCHHHHHHHHHHHHHHHHhcc
Confidence 554 9999999999999999999999999999999999999999999999999999888643 268
Q ss_pred CcceEEEecCCccchhhhhhccccHHHHHHHHHHHhcCCCCeeEe
Q psy9828 151 QFFSVVIFLRAETKSNVKELRAGIPNYIKTISLINFNGSSPSQAI 195 (311)
Q Consensus 151 hlFd~vI~nddl~~~~~~~~~~~~~~y~~Lk~~I~~eQs~pvWV~ 195 (311)
|+||.+|+|+++++ +|.+|+++|..+|++|||||
T Consensus 683 ~~fd~vi~Nd~l~~-----------a~~~l~~~i~~~~~~~~Wvp 716 (721)
T 2xkx_A 683 ECFSAIVEGDSFEE-----------IYHKVKRVIEDLSGPYIWVP 716 (721)
T ss_pred ccCcEEEECcCHHH-----------HHHHHHHHHHhccCCcEEee
Confidence 99999999999998 99999999999999999996
No 6
>1kjw_A Postsynaptic density protein 95; protein-protein interaction, scaffold, neuropeptide; 1.80A {Rattus norvegicus} SCOP: b.34.2.1 c.37.1.1 PDB: 1jxm_A* 1jxo_A
Probab=99.93 E-value=1.5e-26 Score=216.88 Aligned_cols=100 Identities=26% Similarity=0.372 Sum_probs=91.5
Q ss_pred CCCc--cchHHHHHHHhcCCEEEEecCccccccccccCcccEEEEEcCCCHHHHHHHHccCCcc--------------cC
Q psy9828 86 CSGI--IRLSAIRDMMDRGRHGLLDITPNAVDRLNYAQFYPIVIFLRAETKSNVKELRAGIPKL--------------NS 149 (311)
Q Consensus 86 ~~nl--TSl~AVr~ViekGKhCILDV~pqaVkrL~~a~l~PIVIFIkPpS~e~LKeLR~~l~e~--------------~~ 149 (311)
.||. |++++|++++++||+|||||+++++++|+..+++|++|||.|||.+.|++|++|.+++ .+
T Consensus 176 ~g~~YGt~~~~V~~~~~~G~~vildid~~g~~~l~~~~~~pi~IfI~pps~~~L~~L~~R~t~~~i~~rl~~a~~~e~~~ 255 (295)
T 1kjw_A 176 NSHLYGTSVQSVREVAEQGKHCILDVSANAVRRLQAAHLHPIAIFIRPRSLENVLEINKRITEEQARKAFDRATKLEQEF 255 (295)
T ss_dssp TTEEEEEEHHHHHHHHHTTCEEEECCCTTHHHHHHHTTCCCEEEEECCSSHHHHHHHCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred cCcEeeeeHHHHHHHHhcCCeEEEEeCHHHHHHHHhcccCCeEEEEECCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Confidence 4444 8999999999999999999999999999999999999999999999999998888643 16
Q ss_pred CCcceEEEecCCccchhhhhhccccHHHHHHHHHHHhcCCCCeeEee
Q psy9828 150 AQFFSVVIFLRAETKSNVKELRAGIPNYIKTISLINFNGSSPSQAIK 196 (311)
Q Consensus 150 ~hlFd~vI~nddl~~~~~~~~~~~~~~y~~Lk~~I~~eQs~pvWV~~ 196 (311)
.++||.+|+|++++. +|.+|+++|..+|.+|||||.
T Consensus 256 ~~~fd~vivNd~le~-----------a~~~l~~ii~~~~~~~~Wvp~ 291 (295)
T 1kjw_A 256 TECFSAIVEGDSFEE-----------IYHKVKRVIEDLSGPYIWVPA 291 (295)
T ss_dssp GGGCSEEECCSSHHH-----------HHHHHHHHHHHHSCSEEEEEC
T ss_pred cccCeEEEECcCHHH-----------HHHHHHHHHHhccCCCEEeeC
Confidence 889999999999998 999999999999999999963
No 7
>4dey_A Voltage-dependent L-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 1.95A {Oryctolagus cuniculus} PDB: 4dex_A 1t3l_A 1t3s_A 1vyv_A 1vyu_A 1vyt_A 1t0h_B 1t0j_B 1t0h_A 1t0j_A
Probab=99.85 E-value=1e-21 Score=188.76 Aligned_cols=86 Identities=10% Similarity=0.166 Sum_probs=75.3
Q ss_pred cchHHHHHHHhcCCEEEEecCcc-ccccccccCcccEEEEEcCCCHHHHHH-HHccCCcc----------------cCCC
Q psy9828 90 IRLSAIRDMMDRGRHGLLDITPN-AVDRLNYAQFYPIVIFLRAETKSNVKE-LRAGIPKL----------------NSAQ 151 (311)
Q Consensus 90 TSl~AVr~ViekGKhCILDV~pq-aVkrL~~a~l~PIVIFIkPpS~e~LKe-LR~~l~e~----------------~~~h 151 (311)
+.+++|.+++++||+|||||+++ |+++|+...++|++|||.|||++.|++ |+.|.+.. .|.+
T Consensus 217 seVe~i~~v~~~Gk~vILDIDvQnGa~qlk~~~~~~i~IFI~PPS~eeLe~RL~~RGt~~~~rl~~al~~ae~E~~~~~~ 296 (337)
T 4dey_A 217 SEIERIFELARTLQLVVLDADTINHPAQLSKTSLAPIVVYVKISSPKVLQRLIKSRGKSQAKHLNVQMVAADKLAQCPPE 296 (337)
T ss_dssp HHHHHHHHHTTTCCEEEEEETTCCSGGGTTTSSCCCEEEEECCSCHHHHHHHHHTTCHHHHTTHHHHHHHHHHHHHSCGG
T ss_pred hHHHHHHHHHhCCCEEEEEeCcHHHHHHHHhcCCCCEEEEEECcCHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhCcc
Confidence 47778888888999999999998 999999999999999999999999965 56654311 2589
Q ss_pred cceEEEecCCccchhhhhhccccHHHHHHHHHHHh
Q psy9828 152 FFSVVIFLRAETKSNVKELRAGIPNYIKTISLINF 186 (311)
Q Consensus 152 lFd~vI~nddl~~~~~~~~~~~~~~y~~Lk~~I~~ 186 (311)
+||.+|+||+++. +|.+|+++|..
T Consensus 297 ~FDyvIVNDdLe~-----------A~~~L~~iI~~ 320 (337)
T 4dey_A 297 LFDVILDENQLED-----------ACEHLADYLEA 320 (337)
T ss_dssp GCSEEECCSSHHH-----------HHHHHHHHHHH
T ss_pred cCCEEEECCCHHH-----------HHHHHHHHHHH
Confidence 9999999999999 99999999976
No 8
>3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0
Probab=99.69 E-value=1.2e-17 Score=149.05 Aligned_cols=99 Identities=14% Similarity=0.325 Sum_probs=83.3
Q ss_pred CCCCc--cchHHHHHHHhcCCEEEEecCccccccccccCcccEEEEEcCCCHHHH----HHHHccCCcc--cCCCcceEE
Q psy9828 85 KCSGI--IRLSAIRDMMDRGRHGLLDITPNAVDRLNYAQFYPIVIFLRAETKSNV----KELRAGIPKL--NSAQFFSVV 156 (311)
Q Consensus 85 ~~~nl--TSl~AVr~ViekGKhCILDV~pqaVkrL~~a~l~PIVIFIkPpS~e~L----KeLR~~l~e~--~~~hlFd~v 156 (311)
+.+|+ |+.++|++++++||+|||||+++|+++|+...+.|++|||.|||++.. +++.+++.+. .|.+.||.+
T Consensus 91 ~~~n~YGt~~~~v~~~l~~G~~vildid~qg~~~~~~~~~~~~~Ifi~Pps~~~~~e~~~~i~~r~~~~~~~~~~~fd~v 170 (197)
T 3ney_A 91 YQGNMFGTKFETVHQIHKQNKIAILDIEPQTLKIVRTAELSPFIVFIAPTDQGTQTEALQQLQKDSEAIRSQYAHYFDLS 170 (197)
T ss_dssp ETTEEEEEEHHHHHHHHHTTCEEEEECCGGGHHHHCSTTTCEEEEEEEECCBSSCCHHHHHHHHHHHHHHHHHGGGCSEE
T ss_pred hhceecccchhhHHHHHhcCCeEEEEECHHHHHHHHhcCCCceEEEEeCCCccccchHHHHHHHHHHHHHHhhccCCCEE
Confidence 34454 999999999999999999999999999998889999999999998533 3344443222 378999999
Q ss_pred EecCCccchhhhhhccccHHHHHHHHHHHhcCCCCeeE
Q psy9828 157 IFLRAETKSNVKELRAGIPNYIKTISLINFNGSSPSQA 194 (311)
Q Consensus 157 I~nddl~~~~~~~~~~~~~~y~~Lk~~I~~eQs~pvWV 194 (311)
|+||+++. +|.+|+++|.++|++||||
T Consensus 171 ivNd~l~~-----------a~~~l~~ii~~~~~~pqWv 197 (197)
T 3ney_A 171 LVNNGVDE-----------TLKKLQEAFDQACSSPQWV 197 (197)
T ss_dssp EEESCHHH-----------HHHHHHHHHHHCCCCCC--
T ss_pred EECCCHHH-----------HHHHHHHHHHHccCCCCCC
Confidence 99999999 9999999999999999998
No 9
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A
Probab=99.42 E-value=1.8e-13 Score=120.70 Aligned_cols=93 Identities=14% Similarity=0.209 Sum_probs=80.1
Q ss_pred cCCCCc--cchHHHHHHHhcCCEEEEecCcccccccccc-CcccEEEEEcCCCHHHHH-HHHccCCccc-----------
Q psy9828 84 KKCSGI--IRLSAIRDMMDRGRHGLLDITPNAVDRLNYA-QFYPIVIFLRAETKSNVK-ELRAGIPKLN----------- 148 (311)
Q Consensus 84 ~~~~nl--TSl~AVr~ViekGKhCILDV~pqaVkrL~~a-~l~PIVIFIkPpS~e~LK-eLR~~l~e~~----------- 148 (311)
++.||. |+.++|++++++|++||||++++|+++|+.. .+.+++|||.|||.+.|+ .|+.|.+++.
T Consensus 72 ~~~g~~YGt~~~~v~~~l~~g~~vil~id~~g~~~~k~~~~~~~~~Ifi~pps~e~L~~RL~~Rg~e~~e~i~~Rl~~a~ 151 (186)
T 1ex7_A 72 QFSGNYYGSTVASVKQVSKSGKTCILDIDMQGVKSVKAIPELNARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQ 151 (186)
T ss_dssp EETTEEEEEEHHHHHHHHHHTSEEEEECCHHHHHHHHTCGGGCCEEEEEECSCHHHHHHHHHHHCCSCHHHHHHHHHHHH
T ss_pred EEcCceeeeecceeeehhhCCCEEEecCCHHHHHHHHHhcccCceEEEEeCCCHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 456665 9999999999999999999999999999874 789999999999999994 4777765431
Q ss_pred ------CCCcceEEEecCCccchhhhhhccccHHHHHHHHHHHhc
Q psy9828 149 ------SAQFFSVVIFLRAETKSNVKELRAGIPNYIKTISLINFN 187 (311)
Q Consensus 149 ------~~hlFd~vI~nddl~~~~~~~~~~~~~~y~~Lk~~I~~e 187 (311)
+.+.||.+|+|+|++. ++.+|+++|..+
T Consensus 152 ~e~~~~~~~~fD~vIvNddle~-----------a~~~l~~iI~ae 185 (186)
T 1ex7_A 152 AELAYAETGAHDKVIVNDDLDK-----------AYKELKDFIFAE 185 (186)
T ss_dssp HHHHHHTTTCSSEEEECSSHHH-----------HHHHHHHHHTTC
T ss_pred HHHhhccccCCcEEEECcCHHH-----------HHHHHHHHHHhc
Confidence 3578999999999999 899999999754
No 10
>3a00_A Guanylate kinase, GMP kinase; domain movement, dimerization, acetylation, ATP-binding, nucleotide-binding, phosphoprotein, transferase; 1.80A {Saccharomyces cerevisiae} PDB: 1ex6_A* 1ex7_A 1gky_A* 2zzz_A 3sqk_A 4f4j_A 2zzy_A
Probab=98.94 E-value=7.8e-10 Score=94.38 Aligned_cols=86 Identities=16% Similarity=0.227 Sum_probs=65.8
Q ss_pred cchHHHHHHHhcCCEEEEecCccccccccc-cCcccEEEEEcCCCHHHHH-HHHccCCcc---------------cCC--
Q psy9828 90 IRLSAIRDMMDRGRHGLLDITPNAVDRLNY-AQFYPIVIFLRAETKSNVK-ELRAGIPKL---------------NSA-- 150 (311)
Q Consensus 90 TSl~AVr~ViekGKhCILDV~pqaVkrL~~-a~l~PIVIFIkPpS~e~LK-eLR~~l~e~---------------~~~-- 150 (311)
++.+.|++++++|++||||+++++++.|+. ..+.+++|||.||+.+.|+ .|+.|..++ .+.
T Consensus 80 ~~~~~i~~~l~~g~~~il~~~~~g~~~l~~~~~~~~~~i~i~~p~~~~l~~Rl~~Rg~~~~~~i~~rl~~~~~~~~~~~~ 159 (186)
T 3a00_A 80 STVASVKQVSKSGKTCILDIDMQGVKSVKAIPELNARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQAELAYAET 159 (186)
T ss_dssp EEHHHHHHHHHTTCEEEEECCHHHHHHHHTCGGGCCEEEEEECSCC---------------------------------C
T ss_pred CcHHHHHHHHHcCCeEEEEEcHHHHHHHHHhcCCCeEEEEEECcCHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcc
Confidence 788999999999999999999999999998 7899999999999987774 355554321 123
Q ss_pred CcceEEEecCCccchhhhhhccccHHHHHHHHHHHh
Q psy9828 151 QFFSVVIFLRAETKSNVKELRAGIPNYIKTISLINF 186 (311)
Q Consensus 151 hlFd~vI~nddl~~~~~~~~~~~~~~y~~Lk~~I~~ 186 (311)
+.||.+|+|++++. ++.+|+++|..
T Consensus 160 ~~~d~vi~nd~~~~-----------a~~~l~~~i~~ 184 (186)
T 3a00_A 160 GAHDKVIVNDDLDK-----------AYKELKDFIFA 184 (186)
T ss_dssp CCCSEEEECSSHHH-----------HHHHHHHHHTT
T ss_pred cCCcEEEECcCHHH-----------HHHHHHHHHHh
Confidence 89999999999988 89999999864
No 11
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1
Probab=98.84 E-value=2.1e-09 Score=91.44 Aligned_cols=86 Identities=24% Similarity=0.431 Sum_probs=71.0
Q ss_pred cchHHHHHHHhcCCEEEEecCccccccccccCcccEEEEEcCCCHHHHHH----HHccCCc---c---cCCCcceEEEec
Q psy9828 90 IRLSAIRDMMDRGRHGLLDITPNAVDRLNYAQFYPIVIFLRAETKSNVKE----LRAGIPK---L---NSAQFFSVVIFL 159 (311)
Q Consensus 90 TSl~AVr~ViekGKhCILDV~pqaVkrL~~a~l~PIVIFIkPpS~e~LKe----LR~~l~e---~---~~~hlFd~vI~n 159 (311)
++.++|++++++|++||||+++++++.++.....+++|||.||+.+.|++ ++ ++.+ + .|.+.||.+|+|
T Consensus 84 ~~~~~i~~~l~~g~~vil~id~~g~~~~~~~~~~~~~ifi~~p~~~~l~~R~~~i~-r~~~~~~~~~~~~~~~~d~~i~n 162 (180)
T 1kgd_A 84 TKLETIRKIHEQGLIAILDVEPQALKVLRTAEFAPFVVFIAAPTITPGLNEDESLQ-RLQKESDILQRTYAHYFDLTIIN 162 (180)
T ss_dssp EEHHHHHHHHHTTCEEEEECCGGGHHHHSSTTTCEEEEEEECCSCCTTSCCSHHHH-HHHHHHHHHHHHHGGGCSEEEEC
T ss_pred ccHHHHHHHHHCCCeEEEEECHHHHHHHHHhCCCcEEEEEECCCHHHHHhhHHHHH-HHHHHHHHHHHhhhCCCcEEEEC
Confidence 77889999999999999999999999998777789999999998776532 21 1111 1 367899999999
Q ss_pred CCccchhhhhhccccHHHHHHHHHHHhc
Q psy9828 160 RAETKSNVKELRAGIPNYIKTISLINFN 187 (311)
Q Consensus 160 ddl~~~~~~~~~~~~~~y~~Lk~~I~~e 187 (311)
++++. ++.+|+++|.++
T Consensus 163 ~~~~~-----------~~~~l~~~i~~~ 179 (180)
T 1kgd_A 163 NEIDE-----------TIRHLEEAVELV 179 (180)
T ss_dssp SSHHH-----------HHHHHHHHHHHH
T ss_pred cCHHH-----------HHHHHHHHHHHh
Confidence 99888 899999999764
No 12
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes}
Probab=98.72 E-value=3.5e-09 Score=92.14 Aligned_cols=94 Identities=13% Similarity=0.106 Sum_probs=73.4
Q ss_pred CCCCc--cchHHHHHHHhcCCEEEEecCccccccccccCcccEEEEEcCCCHHHHHH-HHccCCcc--------------
Q psy9828 85 KCSGI--IRLSAIRDMMDRGRHGLLDITPNAVDRLNYAQFYPIVIFLRAETKSNVKE-LRAGIPKL-------------- 147 (311)
Q Consensus 85 ~~~nl--TSl~AVr~ViekGKhCILDV~pqaVkrL~~a~l~PIVIFIkPpS~e~LKe-LR~~l~e~-------------- 147 (311)
+.+++ |+.+.|++++++|++||||++++++..++.....+++||+.|||.+.|++ |+.+..++
T Consensus 80 ~~~~~yg~~~~~i~~~l~~g~~vild~~~~g~~~~~~~~~~~~~i~i~~ps~~~l~~Rl~~R~~~~~e~i~~Rl~~~~~e 159 (208)
T 3tau_A 80 YVGNYYGTPLEYVEEKLAAGVDIFLEIEVQGAMQVRKAMPEGIFIFLTPPDLSELKNRIIGRGTESMEVVEERMETAKKE 159 (208)
T ss_dssp ETTEEEEEEHHHHHHHHHTTCCEEEECCHHHHHHHHHHCTTSEEEEEECTTTTTSSCC-------CCHHHHHHHHHHHHH
T ss_pred EccccCCCcHHHHHHHHHcCCeEEEEeeHHHHHHHHHhCCCeEEEEEeCCCHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 34444 88899999999999999999999999998877789999999999877733 44443221
Q ss_pred -cCCCcceEEEecCCccchhhhhhccccHHHHHHHHHHHhcCC
Q psy9828 148 -NSAQFFSVVIFLRAETKSNVKELRAGIPNYIKTISLINFNGS 189 (311)
Q Consensus 148 -~~~hlFd~vI~nddl~~~~~~~~~~~~~~y~~Lk~~I~~eQs 189 (311)
.+.+.||.+|+|+++++ ++.+|+++|..++.
T Consensus 160 ~~~~~~~d~vivN~~~~~-----------~~~~l~~~i~~~~~ 191 (208)
T 3tau_A 160 IEMMASYDYAVVNDVVAN-----------AVQKIKGIVETEHL 191 (208)
T ss_dssp HHHGGGSSEEEECSSHHH-----------HHHHHHHHHHHHHT
T ss_pred HHhhccCCEEEECcCHHH-----------HHHHHHHHHHHHHH
Confidence 24688999999999888 89999999987543
No 13
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A*
Probab=98.53 E-value=1.5e-07 Score=83.97 Aligned_cols=87 Identities=15% Similarity=0.138 Sum_probs=72.7
Q ss_pred cchHHHHHHHhcCCEEEEecCccccccccccCcccEEEEEcCCCHHHHHH-HHccCCcc---------------cCCCcc
Q psy9828 90 IRLSAIRDMMDRGRHGLLDITPNAVDRLNYAQFYPIVIFLRAETKSNVKE-LRAGIPKL---------------NSAQFF 153 (311)
Q Consensus 90 TSl~AVr~ViekGKhCILDV~pqaVkrL~~a~l~PIVIFIkPpS~e~LKe-LR~~l~e~---------------~~~hlF 153 (311)
|+.+.|++++++|++||||+++++.++++..-...+.|||.+++.+.+++ ++.+..++ .+.+.|
T Consensus 96 ~~~~~v~~~l~~G~illLDLD~~~~~~i~~~l~~~~tI~i~th~~~~l~~Rl~~rG~~~~e~i~~rl~~a~~e~~~~~~~ 175 (219)
T 1s96_A 96 TSREAIEQVLATGVDVFLDIDWQGAQQIRQKMPHARSIFILPPSKIELDRRLRGRGQDSEEVIAKRMAQAVAEMSHYAEY 175 (219)
T ss_dssp EEHHHHHHHHTTTCEEEEECCHHHHHHHHHHCTTCEEEEEECSSHHHHHHHHHTTSCSCHHHHHHHHHHHHHHHTTGGGS
T ss_pred CCHHHHHHHHhcCCeEEEEECHHHHHHHHHHccCCEEEEEECCCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhccCC
Confidence 77889999999999999999999999997653367899999999988854 65555322 256899
Q ss_pred eEEEecCCccchhhhhhccccHHHHHHHHHHHhc
Q psy9828 154 SVVIFLRAETKSNVKELRAGIPNYIKTISLINFN 187 (311)
Q Consensus 154 d~vI~nddl~~~~~~~~~~~~~~y~~Lk~~I~~e 187 (311)
|.+|+|++++. +|.+|+++|..+
T Consensus 176 d~~i~Nd~l~~-----------a~~~l~~ii~~~ 198 (219)
T 1s96_A 176 DYLIVNDDFDT-----------ALTDLKTIIRAE 198 (219)
T ss_dssp SEEEECSSHHH-----------HHHHHHHHHHHH
T ss_pred CEEEECcCHHH-----------HHHHHHHHHHHH
Confidence 99999999998 899999999764
No 14
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii}
Probab=98.30 E-value=1.9e-06 Score=72.89 Aligned_cols=88 Identities=13% Similarity=0.090 Sum_probs=72.1
Q ss_pred cchHHHHHHHhcCCEEEEecCccccccccccCcccEEEEEcCCCHHHH-HHHHccCCcc---------------cCCCcc
Q psy9828 90 IRLSAIRDMMDRGRHGLLDITPNAVDRLNYAQFYPIVIFLRAETKSNV-KELRAGIPKL---------------NSAQFF 153 (311)
Q Consensus 90 TSl~AVr~ViekGKhCILDV~pqaVkrL~~a~l~PIVIFIkPpS~e~L-KeLR~~l~e~---------------~~~hlF 153 (311)
+..+.+++++++|++||+|++++++..++.....+.+||+.+|+.+.+ +.++.|.... .+...|
T Consensus 85 ~~~~~i~~~l~~g~~vi~d~~~~~~~~~~~~~~~~~~v~~~~~~~e~l~~Rl~~R~~~~~~~i~~rl~~~~~~~~~~~~~ 164 (205)
T 3tr0_A 85 TEKDWVLRQLKAGRDVLLEIDWQGARQIRELFPPALSIFILPPSIEALRERLIKRRQDDTAIIEQRLALAREEMAHYKEF 164 (205)
T ss_dssp EEHHHHHHHHHTTCEEEEECCHHHHHHHHHHCTTCEEEEEECSCHHHHHHHHHTCTTSCSSTHHHHHHHHHHHHTTGGGC
T ss_pred chHHHHHHHHHcCCeEEEEECHHHHHHHHHhCCCcEEEEEECcCHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcccCC
Confidence 677899999999999999999999999887777889999999998887 4465554321 246789
Q ss_pred eEEEecCCccchhhhhhccccHHHHHHHHHHHhcC
Q psy9828 154 SVVIFLRAETKSNVKELRAGIPNYIKTISLINFNG 188 (311)
Q Consensus 154 d~vI~nddl~~~~~~~~~~~~~~y~~Lk~~I~~eQ 188 (311)
|.+|+|+++++ ++.+|+.+|....
T Consensus 165 d~vi~n~~~~~-----------~~~~l~~~i~~~~ 188 (205)
T 3tr0_A 165 DYLVVNDNFDQ-----------AVQNLIHIISAER 188 (205)
T ss_dssp SEEEECSSHHH-----------HHHHHHHHHHHHT
T ss_pred CEEEECCCHHH-----------HHHHHHHHHHHHH
Confidence 99999998887 8999999997543
No 15
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax}
Probab=98.27 E-value=1.5e-06 Score=74.72 Aligned_cols=88 Identities=15% Similarity=0.139 Sum_probs=69.4
Q ss_pred cchHHHHHHHhcCCEEEEecCccccccccccCc--ccEEEEEcCCCHHHH-HHHHccCCcc---------------c--C
Q psy9828 90 IRLSAIRDMMDRGRHGLLDITPNAVDRLNYAQF--YPIVIFLRAETKSNV-KELRAGIPKL---------------N--S 149 (311)
Q Consensus 90 TSl~AVr~ViekGKhCILDV~pqaVkrL~~a~l--~PIVIFIkPpS~e~L-KeLR~~l~e~---------------~--~ 149 (311)
+..++|++++++|+.||+|+++++++.|+.... .+++|||.|++.+.+ +.++.|..+. . |
T Consensus 91 ~~~~~i~~~l~~g~~vi~d~~~~~~~~l~~~~~~~~~~~i~l~~~s~e~l~~Rl~~R~~~~~~~i~~rl~~~~~~~~~~~ 170 (204)
T 2qor_A 91 TLKSEYDLAVGEGKICLFEMNINGVKQLKESKHIQDGIYIFVKPPSIDILLGRLKNRNTEKPEEINKRMQELTREMDEAD 170 (204)
T ss_dssp EEHHHHHHHHHTTCEEEEECCHHHHHHHHHCSSCSCCEEEEEECSCHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCeEEEEECHHHHHHHHHhcCCCCeEEEEEcCCCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhh
Confidence 777899999999999999999999999875433 569999998888888 4465554311 1 4
Q ss_pred CCcceEEEecCCccchhhhhhccccHHHHHHHHHHHhcC
Q psy9828 150 AQFFSVVIFLRAETKSNVKELRAGIPNYIKTISLINFNG 188 (311)
Q Consensus 150 ~hlFd~vI~nddl~~~~~~~~~~~~~~y~~Lk~~I~~eQ 188 (311)
..+||.+|+|++++. ++.+|.++|..+.
T Consensus 171 ~~~~d~vi~n~~~e~-----------~~~~i~~~i~~~~ 198 (204)
T 2qor_A 171 KVGFNYFIVNDDLAR-----------TYAELREYLLGSY 198 (204)
T ss_dssp HHTCSEEEECSSHHH-----------HHHHHHHHHHHHC
T ss_pred hccCcEEEECcCHHH-----------HHHHHHHHHHHHh
Confidence 577899999987766 8999999997653
No 16
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1
Probab=98.23 E-value=2.2e-06 Score=74.18 Aligned_cols=87 Identities=21% Similarity=0.308 Sum_probs=71.2
Q ss_pred cchHHHHHHHhcCCEEEEecCccccccccccCcccEEEEEcCCCHHHHHH-HHccCCcc---------------cCC---
Q psy9828 90 IRLSAIRDMMDRGRHGLLDITPNAVDRLNYAQFYPIVIFLRAETKSNVKE-LRAGIPKL---------------NSA--- 150 (311)
Q Consensus 90 TSl~AVr~ViekGKhCILDV~pqaVkrL~~a~l~PIVIFIkPpS~e~LKe-LR~~l~e~---------------~~~--- 150 (311)
++.+.|++++++|+.|++|+.+++++.+....+.|.+||+++|++..|.+ ++.+-.++ .+.
T Consensus 83 ~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~p~~~ilde~~~~~d~~~e~~i~~~l~~~~~~~~~a~~~ 162 (198)
T 1lvg_A 83 TSKEAVRAVQAMNRICVLDVDLQGVRSIKKTDLCPIYIFVQPPSLDVLEQRLRLRNTETEESLAKRLAAARTDMESSKEP 162 (198)
T ss_dssp EEHHHHHHHHHTTCEEEEECCHHHHHHHTTSSCCCEEEEEECSCHHHHHHHHHHHTCSCHHHHHHHHHHHHHHTTGGGST
T ss_pred CCHHHHHHHHHcCCcEEEECCHHHHHHHHhcCCCcEEEEEeCCCHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhcc
Confidence 78899999999999999999999999887777899999999999888754 33332211 123
Q ss_pred CcceEEEecCCccchhhhhhccccHHHHHHHHHHHhc
Q psy9828 151 QFFSVVIFLRAETKSNVKELRAGIPNYIKTISLINFN 187 (311)
Q Consensus 151 hlFd~vI~nddl~~~~~~~~~~~~~~y~~Lk~~I~~e 187 (311)
+.||.+|+|++++. ++.+|+++|...
T Consensus 163 ~~~D~iivnd~le~-----------a~~~l~~ii~~~ 188 (198)
T 1lvg_A 163 GLFDLVIINDDLDK-----------AYATLKQALSEE 188 (198)
T ss_dssp TTCSEEEECSSHHH-----------HHHHHHHHTHHH
T ss_pred CCceEEEECCCHHH-----------HHHHHHHHHHHH
Confidence 78999999999988 899999998763
No 17
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum}
Probab=97.93 E-value=8.4e-06 Score=71.22 Aligned_cols=90 Identities=12% Similarity=0.115 Sum_probs=67.3
Q ss_pred cchHHHHHHHhcCCEEEEecCccccccccccC-cccEEEEEcCCCHHHHHH-HHccC--Ccc-------------cCCCc
Q psy9828 90 IRLSAIRDMMDRGRHGLLDITPNAVDRLNYAQ-FYPIVIFLRAETKSNVKE-LRAGI--PKL-------------NSAQF 152 (311)
Q Consensus 90 TSl~AVr~ViekGKhCILDV~pqaVkrL~~a~-l~PIVIFIkPpS~e~LKe-LR~~l--~e~-------------~~~hl 152 (311)
+....+++++++|+.||||+++++...++..- ..+.+||+.+|+.+.+++ |+.+- +++ ++...
T Consensus 106 ~~~~~i~~~~~~~~~vild~~~~g~~~~~~~~~~~~~~v~v~~~~~~~l~~Rl~~R~~~~~~~i~~rl~~~~~~~~~~~~ 185 (231)
T 3lnc_A 106 VPRKNLEDNVDKGVSTLLVIDWQGAFKFMEMMREHVVSIFIMPPSMEELRRRLCGRRADDSEVVEARLKGAAFEISHCEA 185 (231)
T ss_dssp EECTTHHHHHHHTCEEEEECCHHHHHHHHHHSGGGEEEEEEECSCHHHHHHC--------------CHHHHHHHHTTGGG
T ss_pred CCHHHHHHHHHcCCeEEEEcCHHHHHHHHHhcCCCeEEEEEECCcHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhhcC
Confidence 56778999999999999999999998886533 456889999999988754 43332 211 24678
Q ss_pred ceEEEecCCccchhhhhhccccHHHHHHHHHHHhcCCC
Q psy9828 153 FSVVIFLRAETKSNVKELRAGIPNYIKTISLINFNGSS 190 (311)
Q Consensus 153 Fd~vI~nddl~~~~~~~~~~~~~~y~~Lk~~I~~eQs~ 190 (311)
||.+|+|+++++ ++.+|+.+|..++.+
T Consensus 186 ~d~vI~n~~~e~-----------~~~~l~~~i~~~~~~ 212 (231)
T 3lnc_A 186 YDYVIVNEDIEE-----------TADRISNILRAEQMK 212 (231)
T ss_dssp SSEEEECSSHHH-----------HHHHHHHHHHHHHTB
T ss_pred CeEEEECcCHHH-----------HHHHHHHHHHHHhhc
Confidence 999999998877 899999999875443
No 18
>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A
Probab=97.68 E-value=2.4e-05 Score=58.00 Aligned_cols=34 Identities=26% Similarity=0.539 Sum_probs=31.5
Q ss_pred CCCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 41 RGDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 41 ~gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
..+.|.+||+|||.+..+.+|+|++|||+.|++.
T Consensus 3 ~~~~~~~~Alydy~a~~~~ELs~~~Gd~i~v~~~ 36 (65)
T 2lj0_A 3 SQDLFSYQALYSYIPQNDDELELRDGDIVDVMEK 36 (65)
T ss_dssp SSSSCEEEESSCBCCSSTTBCCBCTTCEEEEEEE
T ss_pred CCcCEEEEEceeECCCCcCCcCCCCCCEEEEeEe
Confidence 4578899999999999999999999999999986
No 19
>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1
Probab=97.56 E-value=4.3e-05 Score=55.88 Aligned_cols=33 Identities=18% Similarity=0.621 Sum_probs=29.7
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
|...++||+|||.+..+.+|+|++|||+.|++.
T Consensus 1 g~~~~~~Alydy~~~~~~eLsf~~Gd~i~v~~~ 33 (65)
T 1b07_A 1 GSAEYVRALFDFNGNDEEDLPFKKGDILRIRDK 33 (65)
T ss_dssp -CCCEEEESSCBCCSSTTBCCBCTTCEEEEEEC
T ss_pred CCceEEEECCcCCCCCCCccCCcCCCEEEEEEe
Confidence 456789999999999999999999999999986
No 20
>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A
Probab=97.54 E-value=5.9e-05 Score=53.11 Aligned_cols=33 Identities=27% Similarity=0.622 Sum_probs=30.0
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
|...++||+|||.+..+.+|+|++||+++|++.
T Consensus 1 gp~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 33 (58)
T 2drm_A 1 GPGIQVKALYDYDAQTGDELTFKEGDTIIVHQK 33 (58)
T ss_dssp CCCEEEEESSCBCCCSTTBCCBCTTCEEEEEEC
T ss_pred CCCcEEEECccCCCCCcCCcCCCCCCEEEEEEe
Confidence 456789999999999999999999999999875
No 21
>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}
Probab=97.52 E-value=6.3e-05 Score=53.18 Aligned_cols=33 Identities=15% Similarity=0.502 Sum_probs=30.0
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
|..-++||+|||.+..+.+|+|++||+++|++.
T Consensus 1 g~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 33 (58)
T 1zlm_A 1 GQVKVFRALYTFEPRTPDELYFEEGDIIYITDM 33 (58)
T ss_dssp CCCEEEEESSCBCCSSTTBCCBCTTCEEEEEEC
T ss_pred CCcEEEEECccCCCCCCCCccCCCCCEEEEEEe
Confidence 456689999999999999999999999999875
No 22
>2lx7_A GAS-7, growth arrest-specific protein 7; structural genomics, northeast structural genomics consortiu target HR8574A, PSI-biology; NMR {Homo sapiens}
Probab=97.51 E-value=5.6e-05 Score=55.35 Aligned_cols=29 Identities=14% Similarity=0.563 Sum_probs=26.6
Q ss_pred EEEeccccCCCCCCC-cceeeCCeeEeccc
Q psy9828 46 HIKTHFNYDQPEKGE-MSFRKGDVFHVIEL 74 (311)
Q Consensus 46 YVRA~FDy~~~~~~~-LsFkkGDILhViDT 74 (311)
.+||+|||.++.+.+ |+|++|||+.|++.
T Consensus 5 ~~rAlydy~~~~~~e~Ls~~~Gd~i~v~~~ 34 (60)
T 2lx7_A 5 RCRTLYPFSGERHGQGLRFAAGELITLLQV 34 (60)
T ss_dssp EEEESCCCCSCCCSSCCCCCTTCEEEBSCC
T ss_pred EEEECcccCCCCCCCCccCCCCCEEEEeEe
Confidence 689999999988776 99999999999986
No 23
>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}
Probab=97.51 E-value=6.1e-05 Score=55.06 Aligned_cols=31 Identities=32% Similarity=0.534 Sum_probs=29.0
Q ss_pred eeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 44 SFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 44 SFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
.+++||+|||.+..+.+|+|++||+++|+..
T Consensus 3 ~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~ 33 (69)
T 1wyx_A 3 NVLAKALYDNVAESPDELSFRKGDIMTVLEQ 33 (69)
T ss_dssp EEEEEESSCBCCSSTTBCCBCTTCEEEEEET
T ss_pred CEEEEECccCCcCCCCccCCcCCCEEEEeEC
Confidence 5789999999999999999999999999875
No 24
>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A
Probab=97.51 E-value=6.8e-05 Score=54.75 Aligned_cols=34 Identities=18% Similarity=0.382 Sum_probs=30.8
Q ss_pred CCCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 41 RGDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 41 ~gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
+...+++||+|||.+..+.+|+|++|||+.|++.
T Consensus 4 p~~~~~~~Alydy~~~~~~eLsf~~Gd~i~v~~~ 37 (68)
T 1tg0_A 4 PEVPFKVVAQFPYKSDYEDDLNFEKDQEIIVTSV 37 (68)
T ss_dssp CCSSEEEEESSCBCCSCTTBCCBCTTCEEEEEEE
T ss_pred CCCCEEEEECeeECcCCcCCCCCCCCCEEEEEEe
Confidence 3466899999999999999999999999999875
No 25
>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A
Probab=97.51 E-value=6.2e-05 Score=53.91 Aligned_cols=34 Identities=18% Similarity=0.438 Sum_probs=31.0
Q ss_pred CCCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 41 RGDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 41 ~gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
+.+..++||+|||.+..+.+|+|++||++.|++.
T Consensus 3 p~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 36 (62)
T 2iim_A 3 PLQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQ 36 (62)
T ss_dssp TTTTCEEEESSCBCCCSTTBCCBCTTCEEEEEEC
T ss_pred CCCCcEEEEcccCCCCCCCCcCCCCCCEEEEEEc
Confidence 4567899999999999999999999999999875
No 26
>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.50 E-value=5.9e-05 Score=57.59 Aligned_cols=34 Identities=18% Similarity=0.270 Sum_probs=31.2
Q ss_pred CCCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 41 RGDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 41 ~gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
..+..|+||+|||.+..+.+|+|++|||++|++.
T Consensus 5 ~~~~~~~~al~dy~~~~~~eLsf~~Gd~i~v~~~ 38 (85)
T 2dlp_A 5 SSGSGYVIALRSYITDNCSLLSFHRGDLIKLLPV 38 (85)
T ss_dssp SSCCCEEEESSCBCCSSSSBCCBCTTCEEEECCC
T ss_pred CcCCEEEEECCCCCccCcCCccCcCCCEEEEEEc
Confidence 4578999999999999999999999999999973
No 27
>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A
Probab=97.50 E-value=6.4e-05 Score=54.04 Aligned_cols=33 Identities=36% Similarity=0.760 Sum_probs=30.5
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
...+++||+|||.+..+.+|+|++||+++|++.
T Consensus 4 ~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 36 (64)
T 2ak5_A 4 NSQLVVRAKFNFQQTNEDELSFSKGDVIHVTRV 36 (64)
T ss_dssp CCCCEEEESSCBCCCSTTBCCBCTTCEEEEEEC
T ss_pred CCCEEEEEccccCCcCcCcccCCCCCEEEEeEe
Confidence 467899999999999999999999999999875
No 28
>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}
Probab=97.47 E-value=7e-05 Score=53.41 Aligned_cols=33 Identities=24% Similarity=0.395 Sum_probs=29.3
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
+...++||+|||.+..+.+|+|++||+++|++.
T Consensus 4 ~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 36 (60)
T 2gnc_A 4 GSPEFAIAKFDYVGRSARELSFKKGASLLLYHR 36 (60)
T ss_dssp --CEEEEESSCBCCSSTTBCCBCTTCEEEEEEE
T ss_pred CCCEEEEECCCCCcCCcCCcCCCCCCEEEEEEe
Confidence 467899999999999999999999999999875
No 29
>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=97.47 E-value=8e-05 Score=53.32 Aligned_cols=33 Identities=18% Similarity=0.536 Sum_probs=30.0
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
...-++||+|||.+..+.+|+|++||+++|++.
T Consensus 3 ~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 35 (62)
T 1k4u_S 3 KKGSQVEALFSYEATQPEDLEFQEGDIILVLSK 35 (62)
T ss_dssp CCCEEEECCSCBCCCSSSBCCBCSSCEEEEEEE
T ss_pred CCCeEEEECCCCCcCCCCCccCCCCCEEEEEEe
Confidence 356789999999999999999999999999885
No 30
>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A
Probab=97.46 E-value=7.4e-05 Score=55.33 Aligned_cols=32 Identities=9% Similarity=0.385 Sum_probs=29.3
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
...++||+|||.+..+.+|+|++|||+.|++.
T Consensus 3 ~~~~~~Alydy~a~~~~ELsf~~Gd~i~vl~~ 34 (67)
T 2b86_A 3 EEVIVIAKWDYTAQQDQELDIKKNERLWLLDD 34 (67)
T ss_dssp CCEEEEESSCBCCSSTTSCCBCTTCEEEEEEC
T ss_pred CCeEEEEeeeECCCCCCccccCCCCEEEEEec
Confidence 35789999999999999999999999999885
No 31
>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A
Probab=97.45 E-value=7.4e-05 Score=52.70 Aligned_cols=29 Identities=24% Similarity=0.643 Sum_probs=27.6
Q ss_pred EEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 46 HIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 46 YVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
|+||+|||.+..+.+|+|++||++.|++.
T Consensus 3 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 31 (58)
T 1uti_A 3 WARALYDFEALEEDELGFRSGEVVEVLDS 31 (58)
T ss_dssp EEEESSCBCCCSTTBCCBCTTCEEEEEEC
T ss_pred EEEECccCCCCCcCCCCCCCCCEEEEEEE
Confidence 78999999999999999999999999885
No 32
>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A
Probab=97.45 E-value=8.5e-05 Score=55.48 Aligned_cols=33 Identities=21% Similarity=0.371 Sum_probs=30.3
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
....++||+|||.+..+.+|+|++|||++|++.
T Consensus 8 ~~~~~~~alydy~~~~~~eLsf~~Gd~i~v~~~ 40 (76)
T 2ed1_A 8 NKVRRVKTIYDCQADNDDELTFIEGEVIIVTGE 40 (76)
T ss_dssp CCCEEEEESSCCCCSSSSBCCCCSSCEEEESSC
T ss_pred CCCeEEEECccCCCCCcCCcCcCCCCEEEEEEe
Confidence 456899999999999999999999999999885
No 33
>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.44 E-value=9.7e-05 Score=55.22 Aligned_cols=32 Identities=28% Similarity=0.515 Sum_probs=29.2
Q ss_pred CCeeEEEeccccCCCC-------CCCcceeeCCeeEecc
Q psy9828 42 GDSFHIKTHFNYDQPE-------KGEMSFRKGDVFHVIE 73 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~-------~~~LsFkkGDILhViD 73 (311)
....++||+|||.+.. +.+|+|++|||++|+.
T Consensus 5 ~~~~~~~Alydy~~~~~~~~~~~~~eLsf~~Gd~i~v~~ 43 (75)
T 2ege_A 5 SSGKIMIAALDYDPGDGQMGGQGKGRLALRAGDVVMVYG 43 (75)
T ss_dssp CCSEEEEESSCBCTTTTCCCSSSCCBCCBCTTCEEEEES
T ss_pred CCCcEEEECCCCCCCccccCCCCCCcceECCCCEEEEeE
Confidence 4567899999999998 8999999999999986
No 34
>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A
Probab=97.44 E-value=7.2e-05 Score=53.34 Aligned_cols=32 Identities=22% Similarity=0.499 Sum_probs=29.5
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
+.+++||+|||.+..+.+|+|++||++.|++.
T Consensus 3 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 34 (60)
T 1w70_A 3 KHMRAEALFDFTGNSKLELNFKAGDVIFLLSR 34 (60)
T ss_dssp CSCEEEESSCBCCSSTTBCCBCTTCEEEEEEE
T ss_pred cCcEEEECccCCcCCCCCccCCCCCEEEEEEe
Confidence 46789999999999999999999999999885
No 35
>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}
Probab=97.42 E-value=7.6e-05 Score=56.47 Aligned_cols=34 Identities=9% Similarity=0.190 Sum_probs=31.4
Q ss_pred CCCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 41 RGDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 41 ~gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
+.+..++||+|||.+..+.+|+|++|||++|++.
T Consensus 7 ~~~~~~~~alydy~~~~~~eLsf~~Gd~i~v~~~ 40 (80)
T 2i0n_A 7 PEFAKYARALKDYNVSDTSLLPFKRNDIITITFK 40 (80)
T ss_dssp CCCCCEEEESSCBCCCSSSSCCBCSSEEEEEEEE
T ss_pred CCCCeEEEECCCCCcCCCCCcCCCCCCEEEEEEe
Confidence 4678899999999999999999999999999885
No 36
>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A
Probab=97.42 E-value=8.2e-05 Score=52.83 Aligned_cols=32 Identities=28% Similarity=0.589 Sum_probs=28.7
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
.+-++||+|||.+..+.+|+|++||++.|+..
T Consensus 2 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 33 (60)
T 1oot_A 2 SSPKAVALYSFAGEESGDLPFRKGDVITILKK 33 (60)
T ss_dssp -CCEEEESSCBCCCSTTBCCBCTTCEEEEEEC
T ss_pred CccEEEECccCCcCCcCEeeEcCCCEEEEEEe
Confidence 45689999999999999999999999999875
No 37
>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=97.41 E-value=7.4e-05 Score=55.71 Aligned_cols=35 Identities=29% Similarity=0.542 Sum_probs=31.8
Q ss_pred cCCCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 40 QRGDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 40 ~~gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
......++||+|||.+..+.+|+|++|||+.|+..
T Consensus 6 ~~~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 40 (76)
T 1ujy_A 6 SGSHQLIVKARFNFKQTNEDELSVCKGDIIYVTRV 40 (76)
T ss_dssp CSCCCEEEECCSCBCCSSTTSCCBCSSCCEEESSC
T ss_pred CCCCCEEEEECccCCcCCCCcccCCCCCEEEEEEe
Confidence 35677899999999999999999999999999875
No 38
>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.41 E-value=9.9e-05 Score=53.98 Aligned_cols=33 Identities=15% Similarity=0.425 Sum_probs=30.3
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
....++||+|||.+..+.+|+|++|||+.|+..
T Consensus 5 ~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 37 (71)
T 2cre_A 5 SSGLLARALYDNCPDCSDELAFSRGDILTILEQ 37 (71)
T ss_dssp CCCEEEEESSCCCCSSSSBCCCCSSCCEEEEES
T ss_pred CCcEEEEECcccCcCCCCCCCCCCCCEEEEeEc
Confidence 456899999999999999999999999999875
No 39
>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A
Probab=97.41 E-value=8.7e-05 Score=53.33 Aligned_cols=33 Identities=15% Similarity=0.429 Sum_probs=29.9
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
....++||+|||.+..+.+|+|++|||+.|++.
T Consensus 19 ~~~~~~~alydy~a~~~~eLsf~~Gd~i~v~~~ 51 (62)
T 1g2b_A 19 TGKELVLALYDYQEKSPREVTMKKGDILTLLNS 51 (62)
T ss_dssp SSSCEEEECSCBCCSSTTBCCBCTTCEEEEEEC
T ss_pred CCceEEEEeeeECCCCCCccCCCCCCEEEEEEe
Confidence 345789999999999999999999999999875
No 40
>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=97.40 E-value=0.0001 Score=53.85 Aligned_cols=33 Identities=18% Similarity=0.483 Sum_probs=30.3
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
...+++||+|||.+..+.+|+|++|||++|++.
T Consensus 5 ~~~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~ 37 (69)
T 2eqi_A 5 SSGRTVKALYDYKAKRSDELTFCRGALIHNVSK 37 (69)
T ss_dssp CCCCEEEESSCBCCCSSSCCCBCTTCEEESCCC
T ss_pred CCCcEEEECeeECCCCcCccCCCCCCEEEEEEc
Confidence 456889999999999999999999999999875
No 41
>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A
Probab=97.39 E-value=9.8e-05 Score=51.89 Aligned_cols=29 Identities=17% Similarity=0.657 Sum_probs=27.4
Q ss_pred EEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 46 HIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 46 YVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
++||+|||.+..+.+|+|++||++.|++.
T Consensus 3 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 31 (57)
T 1cka_A 3 YVRALFDFNGNDEEDLPFKKGDILRIRDK 31 (57)
T ss_dssp EEEESSCBCCSSTTBCCBCTTCEEEEEEC
T ss_pred EEEECCcCCCCCCCCCCCCCCCEEEEEEe
Confidence 68999999999999999999999999885
No 42
>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A
Probab=97.38 E-value=0.0001 Score=51.87 Aligned_cols=31 Identities=29% Similarity=0.728 Sum_probs=28.5
Q ss_pred eeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 44 SFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 44 SFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
..++||+|||.+..+.+|+|++||+++|+..
T Consensus 2 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 32 (58)
T 1sem_A 2 TKFVQALFDFNPQESGELAFKRGDVITLINK 32 (58)
T ss_dssp CCEEEESSCBCCSSTTBCCBCTTCEEEEEEC
T ss_pred CeEEEECcCCCCCCCCCcCCCCCCEEEEEEe
Confidence 3578999999999999999999999999886
No 43
>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.38 E-value=0.00013 Score=53.20 Aligned_cols=34 Identities=12% Similarity=0.427 Sum_probs=30.9
Q ss_pred CCCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 41 RGDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 41 ~gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
.+..-++||+|||.+..+.+|+|++||+++|++.
T Consensus 4 ~~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 37 (68)
T 1x2k_A 4 GSSGKVFRALYTFEPRTPDELYFEEGDIIYITDM 37 (68)
T ss_dssp CCCSEEEEESSCCCCCSTTBCCCCSSCEEEEEEC
T ss_pred CCCcEEEEECceECCCCCCcccCCCCCEEEEEEc
Confidence 3567899999999999999999999999999875
No 44
>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A
Probab=97.36 E-value=0.00011 Score=51.69 Aligned_cols=30 Identities=37% Similarity=0.815 Sum_probs=28.0
Q ss_pred eEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 45 FHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 45 FYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
.++||+|||.+..+.+|+|++||+++|+..
T Consensus 3 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 32 (58)
T 2vwf_A 3 TYVQALFDFDPQEDGELGFRRGDFIHVMDN 32 (58)
T ss_dssp CEEEESSCBCCCSTTBCCBCTTCEEEEEEC
T ss_pred eEEEECceECCCCcCCcCCCCCCEEEEEEc
Confidence 478999999999999999999999999875
No 45
>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A
Probab=97.36 E-value=0.00011 Score=51.97 Aligned_cols=30 Identities=17% Similarity=0.533 Sum_probs=27.8
Q ss_pred eEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 45 FHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 45 FYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
-++||+|||.+..+.+|+|++||+++|++.
T Consensus 3 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 32 (58)
T 1zx6_A 3 EYVEALYQFDPQQDGDLGLKPGDKVQLLEK 32 (58)
T ss_dssp CEEEECSCBCCCSTTBCCBCTTCEEEEEEE
T ss_pred eEEEECceECCCCCCCccCCCCCEEEEEEe
Confidence 378999999999999999999999999875
No 46
>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}
Probab=97.36 E-value=0.00011 Score=54.18 Aligned_cols=32 Identities=19% Similarity=0.575 Sum_probs=29.3
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
+.-++||+|||.+..+.+|+|++|||+.|++.
T Consensus 2 ~~~~~~Alydy~~~~~~eLsf~~Gd~i~v~~~ 33 (68)
T 2ew3_A 2 DQPCCRGLYDFEPENQGELGFKEGDIITLTNQ 33 (68)
T ss_dssp CCCEEEESSCBCCCSTTBCCBCTTCEEEEEEE
T ss_pred CCCEEEEeeeECCCCCCccCCCCCCEEEEEEe
Confidence 45689999999999999999999999999885
No 47
>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.36 E-value=0.00013 Score=54.00 Aligned_cols=34 Identities=24% Similarity=0.466 Sum_probs=31.2
Q ss_pred CCCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 41 RGDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 41 ~gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
....+++||+|||.+..+.+|+|++|||++|+..
T Consensus 6 ~~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 39 (72)
T 2dl8_A 6 SGEPIEAIAKFDYVGRTARELSFKKGASLLLYQR 39 (72)
T ss_dssp SCSCEEEEESSCBCCSSSSBCCBCTTCEEEEEEE
T ss_pred CCCCEEEEECccCCcCCCCEeccCCCCEEEEEee
Confidence 4577899999999999999999999999999885
No 48
>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.36 E-value=0.00014 Score=53.21 Aligned_cols=33 Identities=15% Similarity=0.284 Sum_probs=29.8
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
...-|+||+|||.+..+.+|+|++|||++|++.
T Consensus 5 ~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 37 (68)
T 2dmo_A 5 SSGEAHRVLFGFVPETKEELQVMPGNIVFVLKK 37 (68)
T ss_dssp CCSEEEEECSSCCCCSSSSCCCCTTCEEEECEE
T ss_pred CCCCEEEECcCCCcCCcCCCCCCCCCEEEEEEe
Confidence 345689999999999999999999999999875
No 49
>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A
Probab=97.35 E-value=0.00014 Score=52.31 Aligned_cols=33 Identities=30% Similarity=0.625 Sum_probs=29.7
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
....++||+|||.+..+.+|+|++||+++|+..
T Consensus 4 ~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 36 (64)
T 2jte_A 4 GAKEYCRTLFPYTGTNEDELTFREGEIIHLISK 36 (64)
T ss_dssp CSSEEEEESSCBCCSSSSBCCBCTTCEEEEEES
T ss_pred CCCEEEEECccCCccCCCccCCCCCCEEEEEEC
Confidence 356789999999999999999999999999864
No 50
>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A
Probab=97.35 E-value=9.6e-05 Score=52.23 Aligned_cols=29 Identities=28% Similarity=0.548 Sum_probs=27.2
Q ss_pred EEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 46 HIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 46 YVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
++||+|||.+..+.+|+|++||+++|+..
T Consensus 2 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 30 (58)
T 1jo8_A 2 WATAEYDYDAAEDNELTFVENDKIINIEF 30 (58)
T ss_dssp CEEESSCBCCCSTTBCCBCTTCEEEEEEC
T ss_pred EEEECceECCCCCCCcccCCCCEEEEEEe
Confidence 57999999999999999999999999885
No 51
>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1
Probab=97.35 E-value=0.00013 Score=52.35 Aligned_cols=32 Identities=16% Similarity=0.548 Sum_probs=29.5
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
...++||+|||.+..+.+|+|++||++.|++.
T Consensus 4 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 35 (62)
T 1uj0_A 4 MARRVRALYDFEAVEDNELTFKHGELITVLDD 35 (62)
T ss_dssp CCEEEEESSCBCCCSTTBCCBCTTCEEEEEEC
T ss_pred CCeEEEECccCCCCCcCCcCCCCCCEEEEEEe
Confidence 45789999999999999999999999999885
No 52
>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.34 E-value=0.00015 Score=53.68 Aligned_cols=33 Identities=18% Similarity=0.529 Sum_probs=29.9
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
....++||+|||.+..+.+|+|++||+++|++.
T Consensus 6 ~~~~~~~alydy~~~~~~eLsf~~Gd~i~v~~~ 38 (73)
T 2dl7_A 6 SGVCFVKALYDYEGQTDDELSFPEGAIIRILNK 38 (73)
T ss_dssp CCCEEEEESSCBCCSSTTBCCBCTTCEEEEEEC
T ss_pred CCCEEEEECccCCcCCCCcCCCCCCCEEEEEEC
Confidence 356789999999999999999999999999874
No 53
>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A
Probab=97.34 E-value=0.00011 Score=52.75 Aligned_cols=34 Identities=21% Similarity=0.392 Sum_probs=30.9
Q ss_pred CCCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 41 RGDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 41 ~gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
.+...++||+|||.+..+.+|+|++||++.|++.
T Consensus 6 ~~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 39 (65)
T 3ulr_B 6 SDLGITAIALYDYQAAGDDEISFDPDDIITNIEM 39 (65)
T ss_dssp SSCCSCEEECSCBCCCSTTBCCBCTTCEEEEEEC
T ss_pred CCCceEEEEEeeECCCCcCEeeEecCCEEEEEEe
Confidence 4567889999999999999999999999999875
No 54
>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens}
Probab=97.33 E-value=0.00016 Score=52.79 Aligned_cols=33 Identities=9% Similarity=0.430 Sum_probs=30.3
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
....++||+|||.+..+.+|+|++||+++|++.
T Consensus 5 ~~~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~ 37 (68)
T 1wxt_A 5 SSGLKMQVLYEFEARNPRELTVVQGEKLEVLDH 37 (68)
T ss_dssp CCCEEEEESSCBCCCSSSBCCBCTTCEEEEEEC
T ss_pred CCCeEEEECceECCCCcCcCCCCCCCEEEEEEc
Confidence 456889999999999999999999999999885
No 55
>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A
Probab=97.32 E-value=0.00012 Score=51.85 Aligned_cols=31 Identities=39% Similarity=0.749 Sum_probs=28.4
Q ss_pred eeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 44 SFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 44 SFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
..++||+|||.+..+.+|+|++||++.|++.
T Consensus 4 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 34 (59)
T 2g6f_X 4 GSVVRAKFNFQQTNEDELSFSKGDVIHVTRV 34 (59)
T ss_dssp CCEEEESSCBCCSSTTBCCBCTTCEEEEEEE
T ss_pred CcEEEECceeCCCCcCCcCCCCCCEEEEEEe
Confidence 3589999999999999999999999999875
No 56
>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A
Probab=97.32 E-value=0.0001 Score=52.54 Aligned_cols=31 Identities=23% Similarity=0.495 Sum_probs=28.5
Q ss_pred eeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 44 SFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 44 SFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
..++||+|||.+..+.+|+|++||++.|+..
T Consensus 3 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 33 (61)
T 1y0m_A 3 KSAVKALFDYKAQREDELTFTKSAIIQNVEK 33 (61)
T ss_dssp CCCEEESSCBCCCSTTBCCBCTTCEEEEEEC
T ss_pred CCEEEECcCCCcCCCCCcCCcCCCEEEEEEe
Confidence 3578999999999999999999999999885
No 57
>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.32 E-value=0.00015 Score=54.17 Aligned_cols=34 Identities=24% Similarity=0.490 Sum_probs=30.4
Q ss_pred CCCeeEEEeccccCCCC-------CCCcceeeCCeeEeccc
Q psy9828 41 RGDSFHIKTHFNYDQPE-------KGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 41 ~gDSFYVRA~FDy~~~~-------~~~LsFkkGDILhViDT 74 (311)
.....++||+|||.+.. +.+|+|++|||++|++.
T Consensus 4 ~~~~~~~~Al~dy~~~~~~~~~~~~~eLsf~~Gd~i~v~~~ 44 (76)
T 2csi_A 4 GSSGRRMVALYDYDPRESSPNVDVEAELTFCTGDIITVFGE 44 (76)
T ss_dssp CCCSEEEECSSCCCTTTTSCSSSTTTSCCCCTTCEEEEESS
T ss_pred CCCccEEEEcccCCCCCcccCCCCCCcccCCCCCEEEEeEe
Confidence 34667899999999988 89999999999999985
No 58
>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=97.31 E-value=0.00014 Score=53.95 Aligned_cols=32 Identities=25% Similarity=0.511 Sum_probs=29.5
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
..-|+||+|||.+..+.+|+|++||+|+|++.
T Consensus 6 ~~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~ 37 (77)
T 2d8j_A 6 SGQYFVALFDYQARTAEDLSFRAGDKLQVLDT 37 (77)
T ss_dssp CCEEEEESSCBCCSSSSBCCBCTTCCEEEEEC
T ss_pred CCCEEEEccCCCCCCCCccCCCCCCEEEEEEC
Confidence 45689999999999999999999999999986
No 59
>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A
Probab=97.31 E-value=0.00015 Score=53.14 Aligned_cols=33 Identities=18% Similarity=0.432 Sum_probs=30.2
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
+...++||+|||.+..+.+|+|++|||+.|++.
T Consensus 6 ~~~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~ 38 (68)
T 2k2m_A 6 GALKWVLCNYDFQARNSSELSVKQRDVLEVLDD 38 (68)
T ss_dssp CCCCEEEESSCBCCCSSSBCCBCTTCEEEEEEC
T ss_pred CCCEEEEECccCCCCCCCcccCCCCCEEEEEEc
Confidence 456789999999999999999999999999885
No 60
>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A
Probab=97.31 E-value=0.00013 Score=52.24 Aligned_cols=30 Identities=17% Similarity=0.482 Sum_probs=27.9
Q ss_pred eEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 45 FHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 45 FYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
-++||+|||.+..+.+|+|++||+++|+..
T Consensus 2 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~ 31 (65)
T 2oaw_A 2 ELVLALYDYQEKSPREVTMKKGDILTLLNS 31 (65)
T ss_dssp EEEEECSCBCCSSTTBCCBCTTCEEEEEEC
T ss_pred cEEEEcccCCccCCCCCCCCCCCEEEEEEc
Confidence 378999999999999999999999999885
No 61
>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A
Probab=97.30 E-value=0.00015 Score=51.59 Aligned_cols=29 Identities=21% Similarity=0.432 Sum_probs=27.5
Q ss_pred EEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 46 HIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 46 YVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
|+||+|||.+..+.+|+|++||++.|++.
T Consensus 3 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 31 (60)
T 1i07_A 3 YAKSKYDFVARNSSELSVMKDDVLEILDD 31 (60)
T ss_dssp EEEESSCBCCSSTTBCCBCTTCEEEECGG
T ss_pred EEEECccCCCCCCCcccCCCCCEEEEEEc
Confidence 78999999999999999999999999885
No 62
>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.28 E-value=0.00017 Score=55.36 Aligned_cols=34 Identities=15% Similarity=0.503 Sum_probs=31.0
Q ss_pred CCCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 41 RGDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 41 ~gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
.....++||+|||.+..+.+|+|++|||++|++.
T Consensus 14 ~~~~~~~~Alydy~~~~~~eLsf~~Gd~i~v~~~ 47 (88)
T 1x2q_A 14 NKVARKVRALYDFEAVEDNELTFKHGEIIIVLDD 47 (88)
T ss_dssp CCCCEEEEESSCCCCCSSSCCCCCSSCEEEEEEC
T ss_pred CCCCeEEEEcccCCCCCcCccCCCCCCEEEEEEe
Confidence 3467899999999999999999999999999986
No 63
>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A
Probab=97.28 E-value=0.00019 Score=52.15 Aligned_cols=33 Identities=15% Similarity=0.395 Sum_probs=30.3
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
....++||+|||.+..+.+|+|++||++.|+..
T Consensus 5 ~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 37 (68)
T 2dl3_A 5 SSGRPARAKFDFKAQTLKELPLQKGDIVYIYKQ 37 (68)
T ss_dssp CCSEEEEESSCBCCSSTTBCCBCTTCEEEEEEC
T ss_pred CCCcEEEECccCCCCCcCCccCCCCCEEEEeEe
Confidence 466899999999999999999999999999875
No 64
>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.28 E-value=0.00013 Score=53.35 Aligned_cols=33 Identities=21% Similarity=0.364 Sum_probs=29.9
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
....++||+|||.+..+.+|+|++||+++|++.
T Consensus 5 ~~~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~ 37 (68)
T 1wxb_A 5 SSGKYVKILYDFTARNANELSVLKDEVLEVLED 37 (68)
T ss_dssp SSCCCEECSSCBCCSSSSBCCBCTTCEEEEEEC
T ss_pred CCCEEEEECccCCCCCCCccCCCCCCEEEEEEc
Confidence 355689999999999999999999999999885
No 65
>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.28 E-value=0.00016 Score=52.77 Aligned_cols=33 Identities=15% Similarity=0.367 Sum_probs=29.9
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
...-++||+|||.+..+.+|+|++||+++|+..
T Consensus 5 ~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 37 (68)
T 2dl4_A 5 SSGNTYVALYKFVPQENEDLEMRPGDIITLLED 37 (68)
T ss_dssp SCCCEEEESSCCCCSSTTBCCCCTTCEEEEEEC
T ss_pred CCCCEEEEeeeECCCCcCCcCCCCCCEEEEEEe
Confidence 345689999999999999999999999999885
No 66
>1w1f_A Tyrosine-protein kinase LYN; SH3-domain, SH3 domain, tyrosine kinase, signal transduction; NMR {Homo sapiens} PDB: 1wa7_A
Probab=97.27 E-value=0.00017 Score=51.80 Aligned_cols=33 Identities=24% Similarity=0.449 Sum_probs=29.4
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
....++||+|||.+..+.+|+|++||+++|++.
T Consensus 5 ~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 37 (65)
T 1w1f_A 5 EQGDIVVALYPYDGIHPDDLSFKKGEKMKVLEE 37 (65)
T ss_dssp -CCEEEEESSCBCCCSSSCCCBCTTCEEEEEEE
T ss_pred CCCCEEEEceeECCcCCCcCCCCCCCEEEEEEc
Confidence 356789999999999999999999999999875
No 67
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum}
Probab=97.27 E-value=0.001 Score=58.21 Aligned_cols=90 Identities=14% Similarity=0.128 Sum_probs=71.3
Q ss_pred cchHHHHHHHhcCCEEEEecCccccccccccC--cccEEEEEcCCCHHHHHH-HHccCCccc---------------CC-
Q psy9828 90 IRLSAIRDMMDRGRHGLLDITPNAVDRLNYAQ--FYPIVIFLRAETKSNVKE-LRAGIPKLN---------------SA- 150 (311)
Q Consensus 90 TSl~AVr~ViekGKhCILDV~pqaVkrL~~a~--l~PIVIFIkPpS~e~LKe-LR~~l~e~~---------------~~- 150 (311)
+....++++++.++.|+||+++++.++++.+- ..|..||+.+|++..|.+ ++.+..+.. +.
T Consensus 102 ~~~~~i~~~l~~~~~~il~~~lsggq~qR~~i~~~~~~~~ll~~~~~~~Lde~~~~~d~~~~~~i~~~l~~~~~~~~~~h 181 (218)
T 1z6g_A 102 TLKSEYDKAKEQNKICLFEMNINGVKQLKKSTHIKNALYIFIKPPSTDVLLSRLLTRNTENQEQIQKRMEQLNIELHEAN 181 (218)
T ss_dssp EEHHHHHHHHHTTCEEEEEECHHHHHHHTTCSSCCSCEEEEEECSCHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHhCCCcEEEEecHHHHHHHHHHhcCCCcEEEEEeCcCHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhc
Confidence 55678999999999999999999999887654 567999999999988855 444433221 12
Q ss_pred -CcceEEEecCCccchhhhhhccccHHHHHHHHHHHhcCCC
Q psy9828 151 -QFFSVVIFLRAETKSNVKELRAGIPNYIKTISLINFNGSS 190 (311)
Q Consensus 151 -hlFd~vI~nddl~~~~~~~~~~~~~~y~~Lk~~I~~eQs~ 190 (311)
..||.+|+++++++ ++..+..+|..+..+
T Consensus 182 ~~~~d~iiv~~~~~e-----------a~~~~~~ii~~~~~~ 211 (218)
T 1z6g_A 182 LLNFNLSIINDDLTL-----------TYQQLKNYLLNSYIH 211 (218)
T ss_dssp TSCCSEEEECSSHHH-----------HHHHHHHHHHHHTTC
T ss_pred ccCCCEEEECCCHHH-----------HHHHHHHHHHHHHHh
Confidence 68999999999888 899999999876443
No 68
>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1
Probab=97.27 E-value=0.00018 Score=52.22 Aligned_cols=32 Identities=19% Similarity=0.490 Sum_probs=28.0
Q ss_pred CCeeEEEeccccCCCCCCC-cceeeCCeeEecc
Q psy9828 42 GDSFHIKTHFNYDQPEKGE-MSFRKGDVFHVIE 73 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~-LsFkkGDILhViD 73 (311)
.+..++||+|||.+..+.+ |+|++|||+.|+.
T Consensus 5 ~~~~~~~al~dy~~~~~~e~Lsf~~Gd~i~v~~ 37 (67)
T 3rnj_A 5 SGRMRVKAIFSHAAGDNSTLLSFKEGDLITLLV 37 (67)
T ss_dssp CCCCEEEESSCBCCCSCTTBCCBCTTCEEEECS
T ss_pred CCCeEEEEccccCCCCCCCCccCCCCCEEEEee
Confidence 4567999999999887666 9999999999985
No 69
>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.26 E-value=0.00018 Score=53.29 Aligned_cols=33 Identities=21% Similarity=0.402 Sum_probs=30.0
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
+...++||+|||.+..+.+|+|++|||++|+..
T Consensus 5 ~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 37 (73)
T 2dm1_A 5 SSGGTAVARYNFAARDMRELSLREGDVVRIYSR 37 (73)
T ss_dssp CSSSEEEESSCBCCCSTTBCCBCTTCEEECCBS
T ss_pred CCCCEEEECccCCcCCCCcCCCCCCCEEEEEEe
Confidence 456789999999999999999999999999875
No 70
>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}
Probab=97.26 E-value=0.00018 Score=51.14 Aligned_cols=32 Identities=28% Similarity=0.531 Sum_probs=29.2
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
..-++||+|||.+..+.+|+|++||+++|++.
T Consensus 4 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 35 (60)
T 2xmf_A 4 GSPQCKALYAYDAQDTDELSFNANDIIDIIKE 35 (60)
T ss_dssp CSCEEEESSCBCCSSTTBCCBCTTCEEEEEEE
T ss_pred CCcEEEECccCCcCCcCCcCCCCCCEEEEEEe
Confidence 45678999999999999999999999999885
No 71
>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=97.26 E-value=0.0002 Score=53.79 Aligned_cols=34 Identities=15% Similarity=0.593 Sum_probs=31.3
Q ss_pred CCCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 41 RGDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 41 ~gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
.+...++||+|||.+..+.+|+|++|||+.|++.
T Consensus 14 ~~~~~~~~Alydy~a~~~~eLsf~~Gd~i~Vl~~ 47 (72)
T 2l0a_A 14 QHEARKVRAIYDFEAAEDNELTFKAGEIITVLDD 47 (72)
T ss_dssp CCCCEEEEESSCBCCSSTTBCCBCTTCEEEEEEE
T ss_pred CCCCeEEEECCccCCCCCCccCCCCCCEEEEEEe
Confidence 5677899999999999999999999999999875
No 72
>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A
Probab=97.25 E-value=0.00016 Score=53.49 Aligned_cols=29 Identities=24% Similarity=0.541 Sum_probs=27.4
Q ss_pred EEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 46 HIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 46 YVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
++||+|||.+..+.+|+|++|||+.|++.
T Consensus 4 ~~~Alydy~a~~~~eLs~~~Gd~i~vl~~ 32 (69)
T 2ydl_A 4 YCKVIFPYEAQNDDELTIKEGDIVTLINK 32 (69)
T ss_dssp EEEESSCBCCCSTTBCCBCTTCEEEEEES
T ss_pred EEEEcccCCCCCCCccccCCCCEEEEEEc
Confidence 68999999999999999999999999875
No 73
>2rqv_A BUD emergence protein 1; BEM1P, SH3, CDC42P, cytoplasm, cytoskeleton, SH3 domain, SIG protein; NMR {Saccharomyces cerevisiae} PDB: 2rqw_A
Probab=97.25 E-value=0.0001 Score=59.88 Aligned_cols=34 Identities=9% Similarity=0.163 Sum_probs=31.2
Q ss_pred CCCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 41 RGDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 41 ~gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
+...+|+||+|||.++.+.+|+|++|||+.|++.
T Consensus 2 p~~~~~~~Alydy~a~~~~ELsf~~Gd~i~vl~~ 35 (108)
T 2rqv_A 2 PLGSLYAIVLYDFKAEKADELTTYVGENLFICAH 35 (108)
T ss_dssp CCSCCCEEESSCCCCCSSSBCCCCSSEEECCCCE
T ss_pred CCCCeEEEECCCcCCCCCCcCCcCCCCEEEEeEe
Confidence 4567899999999999999999999999999986
No 74
>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A
Probab=97.25 E-value=0.00017 Score=50.94 Aligned_cols=31 Identities=10% Similarity=0.262 Sum_probs=28.3
Q ss_pred eeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 44 SFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 44 SFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
..++||+|||.+..+.+|+|++||++.|++.
T Consensus 2 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 32 (60)
T 2v1q_A 2 MERGIVQYDFMAESQDELTIKSGDKVYILDD 32 (60)
T ss_dssp CCEEEECSCBCCCSTTBCCBCTTCEEEEEES
T ss_pred CcEEEEeeeECCCCCCCccCCCCCEEEEEeC
Confidence 3588999999999999999999999999874
No 75
>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens}
Probab=97.24 E-value=0.00014 Score=53.20 Aligned_cols=30 Identities=23% Similarity=0.428 Sum_probs=28.0
Q ss_pred eEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 45 FHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 45 FYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
.++||+|||.++.+.+|+|++|||+.|++.
T Consensus 2 ~~~~Alydy~~~~~~eLs~~~Gd~i~v~~~ 31 (65)
T 2fei_A 2 RQCKVLFEYIPQNEDELELKVGDIIDINEE 31 (65)
T ss_dssp CEEECSSCCCCCSTTBCCCCTTCEEECCCC
T ss_pred eEEEECccCCcCCcCccCCCCCCEEEEEEe
Confidence 378999999999999999999999999885
No 76
>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D
Probab=97.23 E-value=0.00018 Score=50.97 Aligned_cols=31 Identities=26% Similarity=0.602 Sum_probs=27.8
Q ss_pred eeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 44 SFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 44 SFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
...+||+|||.+..+.+|+|++||++.|+..
T Consensus 3 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 33 (60)
T 2x3w_D 3 GVRVRALYDYDGQEQDELSFKAGDELTKLGE 33 (60)
T ss_dssp -CEEEECSCBCCSSSSBCCBCTTCEEEECSC
T ss_pred CCEEEECcccCccCCCcccCCCCCEEEEEEc
Confidence 3568999999999999999999999999875
No 77
>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}
Probab=97.23 E-value=0.00019 Score=50.51 Aligned_cols=30 Identities=10% Similarity=0.336 Sum_probs=27.8
Q ss_pred eEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 45 FHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 45 FYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
-++||+|||.+..+.+|+|++||++.|++.
T Consensus 2 ~~~~al~d~~~~~~~eLs~~~Gd~i~v~~~ 31 (59)
T 1yn8_A 2 QRAVALYDFEPENDNELRLAEGDIVFISYK 31 (59)
T ss_dssp EEEEECSCBCCCSTTBCCBCTTCEEEEEEE
T ss_pred CEEEECccCCCCCCCCcCCCCCCEEEEEEc
Confidence 468999999999999999999999999875
No 78
>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A
Probab=97.23 E-value=0.00016 Score=52.74 Aligned_cols=30 Identities=17% Similarity=0.241 Sum_probs=27.7
Q ss_pred eEEEeccccCCC--CCCCcceeeCCeeEeccc
Q psy9828 45 FHIKTHFNYDQP--EKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 45 FYVRA~FDy~~~--~~~~LsFkkGDILhViDT 74 (311)
.|+||+|||.+. .+.+|+|++|||++|++.
T Consensus 2 ~~~~al~dy~~~~~~~~eLsf~~Gd~i~v~~~ 33 (67)
T 2bzy_A 2 VFAKAIQKRVPCAYDKTALALEVGDIVKVTRM 33 (67)
T ss_dssp EEEEECSCBCSEEECTTBCCBCTTCEEEEEEE
T ss_pred cEEEEeeeECCCCCCCCccccCCCCEEEEEEe
Confidence 478999999998 889999999999999885
No 79
>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.22 E-value=0.00017 Score=54.48 Aligned_cols=32 Identities=28% Similarity=0.434 Sum_probs=29.0
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
..-+++|+|||.+..+.+|+|++||+|.|++.
T Consensus 16 ~~~~~~Alydy~a~~~~eLs~~~Gd~i~v~~~ 47 (79)
T 2cud_A 16 DSDFLAVLSDYPSPDISPPIFRRGEKLRVISD 47 (79)
T ss_dssp CCCEEEESSCSSCTTTSCCSSCTTCEEEEEEE
T ss_pred CCeEEEEccCCCCCCCCcCCCCCCCEEEEEec
Confidence 44589999999999999999999999999874
No 80
>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=97.22 E-value=0.00023 Score=53.03 Aligned_cols=34 Identities=12% Similarity=0.382 Sum_probs=30.9
Q ss_pred CCCeeEEEeccccCCC-CCCCcceeeCCeeEeccc
Q psy9828 41 RGDSFHIKTHFNYDQP-EKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 41 ~gDSFYVRA~FDy~~~-~~~~LsFkkGDILhViDT 74 (311)
.+.+.++||+|||.+. .+.+|+|++||++.|+..
T Consensus 6 ~~~~~~~~al~dy~~~~~~~eLs~~~Gd~i~v~~~ 40 (77)
T 2enm_A 6 SGMATKARVMYDFAAEPGNNELTVTEGEIITVTNP 40 (77)
T ss_dssp SCSCEEEEESSCCCCCTTSSBCCCCTTCEEEEEES
T ss_pred CCCCcEEEECccCCCCCCCCeecCCCCCEEEEeEc
Confidence 4567899999999998 899999999999999875
No 81
>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}
Probab=97.22 E-value=0.00016 Score=52.87 Aligned_cols=32 Identities=9% Similarity=0.204 Sum_probs=28.6
Q ss_pred CeeEEEeccccCCC--CCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQP--EKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~--~~~~LsFkkGDILhViDT 74 (311)
...++||+|||.+. .+.+|+|++|||++|++.
T Consensus 5 ~~~~~~alydy~~~~~~~~eLs~~~Gd~i~v~~~ 38 (67)
T 2eyx_A 5 GPIYARVIQKRVPNAYDKTALALEVGELVKVTKI 38 (67)
T ss_dssp CSCBEEECCCBCCCTTCSSBCCBCSSEEEEEEEE
T ss_pred CCEEEEEeEEECCCCCCCCccccCCCCEEEEEEe
Confidence 44689999999998 788999999999999875
No 82
>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}
Probab=97.21 E-value=0.00023 Score=51.74 Aligned_cols=33 Identities=27% Similarity=0.436 Sum_probs=30.0
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
....++||+|||.+..+.+|+|++||+++|+..
T Consensus 5 ~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 37 (68)
T 2djq_A 5 SSGPRAKALCNYRGKNPGDLKFNKGDVILLRRQ 37 (68)
T ss_dssp SSCCEEEECSCCCSCCTTCCCCCTTCEEEEEEC
T ss_pred CCceEEEECCCCCCCCcCCccCCCCCEEEEEEe
Confidence 356799999999999999999999999999875
No 83
>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A 4gbq_A
Probab=97.21 E-value=0.00018 Score=53.50 Aligned_cols=33 Identities=21% Similarity=0.556 Sum_probs=28.5
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
...+++||+|||.+..+.+|+|++|||+.|++.
T Consensus 7 ~~~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~ 39 (74)
T 1gbq_A 7 VGSMEAIAKYDFKATADDELSFKRGDILKVLNE 39 (74)
T ss_dssp ---CEEEESSCBCCSSTTBCCBCTTCEEECCBC
T ss_pred CCCeEEEECccCCCCCCCeeeEcCCCEEEEeEe
Confidence 456789999999999999999999999999875
No 84
>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens}
Probab=97.21 E-value=0.00021 Score=54.88 Aligned_cols=34 Identities=21% Similarity=0.430 Sum_probs=29.5
Q ss_pred CCCeeEEEecccc-CCCCCCCcceeeCCeeEeccc
Q psy9828 41 RGDSFHIKTHFNY-DQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 41 ~gDSFYVRA~FDy-~~~~~~~LsFkkGDILhViDT 74 (311)
....+++||+||| .+..+.+|+|++|||+.|++.
T Consensus 15 ~~~~~~~~Alydy~~a~~~~eLsf~~GDiI~V~~~ 49 (83)
T 2ke9_A 15 PRGSLKVRALKDFWNLHDPTALNVRAGDVITVLEQ 49 (83)
T ss_dssp --CCEEEEESSCBCCCSCTTBCCBCTTCEEEESCS
T ss_pred CCCCeEEEEccccCCCCCCCcccccCCCEEEEEEe
Confidence 3466899999999 788899999999999999986
No 85
>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.21 E-value=0.00016 Score=54.34 Aligned_cols=34 Identities=21% Similarity=0.401 Sum_probs=31.1
Q ss_pred CCCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 41 RGDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 41 ~gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
....+++||+|||.+..+.+|+|++|||++|++.
T Consensus 14 ~~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 47 (79)
T 1x69_A 14 NDLGITAVALYDYQAAGDDEISFDPDDIITNIEM 47 (79)
T ss_dssp CCCCCCEEESSCCCCSSSSBCCCCTTCEEEEEEE
T ss_pred CCCCeEEEECccCCCCCCCCcCcCCCCEEEEeEe
Confidence 4577899999999999999999999999999875
No 86
>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.20 E-value=0.00023 Score=53.72 Aligned_cols=34 Identities=18% Similarity=0.350 Sum_probs=31.2
Q ss_pred CCCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 41 RGDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 41 ~gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
.+...++||+|||.+..+.+|+|++||+++|++.
T Consensus 7 ~~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 40 (81)
T 2ysq_A 7 GDSIVSAEAVWDHVTMANRELAFKAGDVIKVLDA 40 (81)
T ss_dssp CCCCEEEEESSCCCCSSSSSCCCCTTCEEEEEEC
T ss_pred CCCceEEEEeeeECCCCCCcCCCCCCCEEEEEEE
Confidence 4567899999999999999999999999999885
No 87
>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}
Probab=97.20 E-value=0.00021 Score=52.66 Aligned_cols=34 Identities=21% Similarity=0.411 Sum_probs=30.6
Q ss_pred CCCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 41 RGDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 41 ~gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
....-|+||+|||.+..+.+|+|++||+++|+..
T Consensus 6 ~~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 39 (73)
T 2k9g_A 6 TKSKDYCKVIFPYEAQNDDELTIKEGDIVTLINK 39 (73)
T ss_dssp CSSCEEEEECSCBCCSSTTBCCBCTTCEEEEEEC
T ss_pred CCCccEEEECccCCCCCCCeeeECCCCEEEEEEC
Confidence 3456799999999999999999999999999874
No 88
>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.20 E-value=0.00024 Score=54.64 Aligned_cols=33 Identities=15% Similarity=0.228 Sum_probs=29.3
Q ss_pred CCeeEEEeccccCCC--CCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQP--EKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~--~~~~LsFkkGDILhViDT 74 (311)
....|+||+|||.+. .+.+|+|++|||++|++.
T Consensus 14 ~~~~~~~alydy~~~a~~~~eLsf~~Gd~i~v~~~ 48 (88)
T 2dbk_A 14 NGPVFAKAIQKRVPCAYDKTALALEVGDIVKVTRM 48 (88)
T ss_dssp CCCEEEEECSCBCCCTTCSSBCCBCTTCEEEEEEE
T ss_pred CCCEEEEEcccccCCCCCCCcccCCCCCEEEEEEe
Confidence 456799999999965 889999999999999886
No 89
>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A
Probab=97.20 E-value=0.0002 Score=51.13 Aligned_cols=32 Identities=22% Similarity=0.407 Sum_probs=28.3
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
...++||+|||.+..+.+|+|++||+++|++.
T Consensus 6 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 37 (65)
T 3u23_A 6 KKRQCKVLFEYIPQNEDELELKVGDIIDINEE 37 (65)
T ss_dssp --CEEEECSCBCCSSTTBCCBCTTCEEEEEEE
T ss_pred CCeEEEEeeeeCCCCcCCcCCCCCCEEEEEEe
Confidence 45689999999999999999999999999875
No 90
>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=97.20 E-value=0.00023 Score=52.85 Aligned_cols=33 Identities=15% Similarity=0.377 Sum_probs=30.2
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
....++||+|||.+..+.+|+|++|||++|+..
T Consensus 8 ~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 40 (74)
T 1j3t_A 8 VENLKAQALCSWTAKKDNHLNFSKHDIITVLEQ 40 (74)
T ss_dssp CCCCEEEESSCBCCCSTTBCCBCTTCEEEEEEE
T ss_pred CCCeEEEECCCCCCCCCCccCCCCCCEEEEEec
Confidence 456899999999999999999999999999885
No 91
>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}
Probab=97.19 E-value=0.00022 Score=52.82 Aligned_cols=33 Identities=24% Similarity=0.543 Sum_probs=30.3
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
...-++||+|||.+..+.+|+|++||+++|++.
T Consensus 11 ~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 43 (73)
T 3c0c_A 11 LDQPSCKALYDFEPENDGELGFREGDLITLTNQ 43 (73)
T ss_dssp CCSCEEEESSCBCCSSTTBCCBCTTCEEEEEEE
T ss_pred CCCeEEEECccCCCCCCCCccCcCCCEEEEEEe
Confidence 466789999999999999999999999999885
No 92
>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A
Probab=97.19 E-value=0.00024 Score=52.44 Aligned_cols=34 Identities=15% Similarity=0.510 Sum_probs=30.5
Q ss_pred CCCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 41 RGDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 41 ~gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
....-++||+|||.+..+.+|+|++|||++|+..
T Consensus 4 ~~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 37 (73)
T 2dbm_A 4 GSSGPCCRALYDFEPENEGELGFKEGDIITLTNQ 37 (73)
T ss_dssp CCCCCEEEESSCBCCCSTTCCCBCTTCEEECCBC
T ss_pred CCCCCEEEEccccCCCCCCCccCCCCCEEEEEEe
Confidence 3456789999999999999999999999999885
No 93
>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}
Probab=97.19 E-value=0.00022 Score=52.17 Aligned_cols=29 Identities=17% Similarity=0.460 Sum_probs=27.3
Q ss_pred EEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 46 HIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 46 YVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
++||+|||.+..+.+|+|++||++.|++.
T Consensus 3 ~~~alydy~~~~~~eLs~~~Gd~i~v~~~ 31 (65)
T 2nwm_A 3 AARLKFDFQAQSPKELTLQKGDIVYIHKE 31 (65)
T ss_dssp EEEECSCBCCCSTTBCCBCTTCEEEEEEC
T ss_pred EEEEeeeECCCCcCccCCcCCCEEEEEEe
Confidence 68999999999999999999999999875
No 94
>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.19 E-value=0.0002 Score=54.63 Aligned_cols=33 Identities=9% Similarity=0.406 Sum_probs=30.2
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
....|+||+|||.+..+.+|+|++||++.|++.
T Consensus 17 ~~~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~ 49 (85)
T 2yuq_A 17 PEETVVIALYDYQTNDPQELALRRNEEYCLLDS 49 (85)
T ss_dssp SSSCEEEESSCCCCSCSSBCCCCBTEEEEEEEC
T ss_pred CCCeEEEECcCCCCCCCCcCCCCCCCEEEEEEe
Confidence 455789999999999999999999999999986
No 95
>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=97.19 E-value=0.00013 Score=53.92 Aligned_cols=32 Identities=22% Similarity=0.345 Sum_probs=29.1
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEecc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIE 73 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViD 73 (311)
....++||+|||.+..+.+|+|++|||++|++
T Consensus 8 ~~~~~~~alydy~~~~~~eLsf~~Gd~i~v~~ 39 (72)
T 1ugv_A 8 TPFRKAKALYACKAEHDSELSFTAGTVFDNVH 39 (72)
T ss_dssp CSCCCEEESSCBCCCSSSBCCBCTTCEEBSCC
T ss_pred CCccEEEEccccCCcCCCEeCCcCCCEEEEEE
Confidence 34578999999999999999999999999987
No 96
>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=97.18 E-value=0.00024 Score=53.25 Aligned_cols=33 Identities=9% Similarity=0.174 Sum_probs=30.1
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
....|+||+|||.+..+.+|+|++||+++|+..
T Consensus 5 ~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 37 (80)
T 1ue9_A 5 SSGEIAQVTSAYVASGSEQLSLAPGQLILILKK 37 (80)
T ss_dssp SCCEEEEECSCCCCCSTTBCCCCTTCEEEEEEE
T ss_pred CCCeEEEECcccCCCCCCCCCCCCCCEEEEEEe
Confidence 356789999999999999999999999999885
No 97
>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.18 E-value=0.00019 Score=54.00 Aligned_cols=34 Identities=18% Similarity=0.521 Sum_probs=31.2
Q ss_pred CCCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 41 RGDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 41 ~gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
.....++||+|||.+..+.+|+|++|||+.|++.
T Consensus 14 ~~~~~~~~al~dy~~~~~~eLsf~~Gd~i~v~~~ 47 (80)
T 2d8h_A 14 LNQPIEVTALYSFEGQQPGDLNFQAGDRITVISK 47 (80)
T ss_dssp CSSCEEEECSSCEECSSTTBCEECTTCEEEEEEC
T ss_pred CCCCEEEEECccCCcCCCCeeeEcCCCEEEEeEC
Confidence 4567899999999999999999999999999885
No 98
>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*
Probab=97.18 E-value=0.00019 Score=51.28 Aligned_cols=32 Identities=13% Similarity=0.143 Sum_probs=28.4
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
..=++||+|||.+..+.+|+|++||++.|++.
T Consensus 2 ~~~~~~al~~y~~~~~~eLs~~~Gd~i~v~~~ 33 (62)
T 2fpe_A 2 SEQTHRAIFRFVPRHEDELELEVDDPLLVELQ 33 (62)
T ss_dssp CCCCEEECSCBCCSSTTBCCBCTTCEEEEEEE
T ss_pred CCCEEEECccCCccCcCcCcCCCCCEEEEEEe
Confidence 34468999999999999999999999999865
No 99
>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.17 E-value=0.00028 Score=52.85 Aligned_cols=34 Identities=18% Similarity=0.362 Sum_probs=30.6
Q ss_pred CCCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 41 RGDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 41 ~gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
.....++||+|||.+..+.+|+|++|||+.|+..
T Consensus 4 ~~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 37 (79)
T 2yun_A 4 GSSGRLCKALYSFQARQDDELNLEKGDIVIIHEK 37 (79)
T ss_dssp CCCSEEEEESSCBCCSSTTBCCBCTTCEEEEEEC
T ss_pred CCCCCEEEECccCCcCCCCCcCCCCCCEEEEEEc
Confidence 3456789999999999999999999999999886
No 100
>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens}
Probab=97.17 E-value=0.00019 Score=52.47 Aligned_cols=33 Identities=27% Similarity=0.463 Sum_probs=30.1
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
....++||+|||.+..+.+|+|++||+++|+..
T Consensus 5 ~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 37 (70)
T 2ecz_A 5 SSGGEAIAKFNFNGDTQVEMSFRKGERITLLRQ 37 (70)
T ss_dssp CCCBCEEESSCCCCCSTTBCCCCTTCBCEEEEE
T ss_pred CCCCEEEECccCCCCCcCCcCCCCCCEEEEEEe
Confidence 456789999999999999999999999999885
No 101
>4glm_A Dynamin-binding protein; SH3 domain, DNMBP, structural genomics, structural genomics consortium, SGC, SRC homology 3 domains, cell junctions; 1.90A {Homo sapiens}
Probab=97.17 E-value=0.00021 Score=52.09 Aligned_cols=34 Identities=18% Similarity=0.340 Sum_probs=29.1
Q ss_pred CCCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 41 RGDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 41 ~gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
.+...++||+|||.+..+.+|+|++||+++|++.
T Consensus 10 ~~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 43 (72)
T 4glm_A 10 QGALTYGVALYRFQALEPNELDFEVGDKIRILAT 43 (72)
T ss_dssp ---CCEEEESSCBCCCSTTBCCBCTTCEEEEEEE
T ss_pred CCCCeEEEECccCCCCCCCcCCCCCCCEEEEEEc
Confidence 3456789999999999999999999999999875
No 102
>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*
Probab=97.17 E-value=0.00022 Score=52.40 Aligned_cols=33 Identities=18% Similarity=0.477 Sum_probs=29.7
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
....++||+|||.+..+.+|+|++||+++|++.
T Consensus 13 ~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 45 (73)
T 3h0h_A 13 TGVTLFVALYDYEAITEDDLSFHKGEKFQILNS 45 (73)
T ss_dssp STTCEEEESSCBCCSSTTBCCBCTTCEEEEEEC
T ss_pred CCCEEEEECccCCCCCCCcceEeCCCEEEEEEe
Confidence 345788999999999999999999999999875
No 103
>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=97.16 E-value=0.00026 Score=51.83 Aligned_cols=32 Identities=22% Similarity=0.453 Sum_probs=29.3
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
..-++||+|||.+..+.+|+|++||+++|++.
T Consensus 6 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 37 (70)
T 2da9_A 6 SGDYCKVIFPYEAQNDDELTIKEGDIVTLINK 37 (70)
T ss_dssp SSEEEEECSCCCCSSTTBCCCCTTEEEEEEEC
T ss_pred CCcEEEECcCCCCCCcCEeeEcCCCEEEEEEC
Confidence 45789999999999999999999999999874
No 104
>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.16 E-value=0.0002 Score=53.57 Aligned_cols=32 Identities=31% Similarity=0.509 Sum_probs=29.7
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
..+++||+|||.+..+.+|+|++|||++|++.
T Consensus 9 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 40 (76)
T 2epd_A 9 GVVEAVACFAYTGRTAQELSFRRGDVLRLHER 40 (76)
T ss_dssp CCEEEEESSCEECSSTTBCEECTTCEEEEEEE
T ss_pred CCEEEEECcCCCCCCCCccCCCCCCEEEEEEe
Confidence 45889999999999999999999999999886
No 105
>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=97.15 E-value=0.0002 Score=53.60 Aligned_cols=33 Identities=12% Similarity=0.363 Sum_probs=30.3
Q ss_pred CCeeEEEeccccCCCCCC-CcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKG-EMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~-~LsFkkGDILhViDT 74 (311)
....++||+|||.+..+. +|+|++||++.|++.
T Consensus 12 ~~~~~~~alydy~~~~~~~eLs~~~Gd~i~v~~~ 45 (80)
T 2v1r_A 12 SKLEFARALYDFVPENPEMEVALKKGDLMAILSK 45 (80)
T ss_dssp GGCEEEEESSCBCCSSTTTBCCBCTTCEEEEEEE
T ss_pred CcCEEEEECccCCCCCCCCEecCCCCCEEEEEEC
Confidence 456899999999999998 999999999999886
No 106
>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=97.15 E-value=0.00018 Score=52.31 Aligned_cols=32 Identities=19% Similarity=0.407 Sum_probs=29.3
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
...++||+|||.+..+.+|+|++||+++|++.
T Consensus 6 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 37 (68)
T 1wi7_A 6 SGRRCQVAFSYLPQNDDELELKVGDIIEVVGE 37 (68)
T ss_dssp CCCCEEESSCBCCSSTTBCCBCTTCEECCCEE
T ss_pred CCCEEEECccCCcCCCCCccCcCCCEEEEEEc
Confidence 45789999999999999999999999999875
No 107
>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=97.15 E-value=0.00021 Score=53.49 Aligned_cols=31 Identities=13% Similarity=0.438 Sum_probs=27.6
Q ss_pred eeEEEeccccCCCCCC-CcceeeCCeeEeccc
Q psy9828 44 SFHIKTHFNYDQPEKG-EMSFRKGDVFHVIEL 74 (311)
Q Consensus 44 SFYVRA~FDy~~~~~~-~LsFkkGDILhViDT 74 (311)
-|+.||+|||.++.+. +|+|++|||+.|++.
T Consensus 7 ~~~~~aly~y~a~~~~dELsf~~Gd~i~Vl~~ 38 (69)
T 1nm7_A 7 HHFARALYDFVPENPEMEVALKKGDLMAILSK 38 (69)
T ss_dssp --CEEECSCCCCSSTTSCCCCCTTCEEEECCS
T ss_pred eeEEEEEecccCCCCCCccCCCCCCEEEEEec
Confidence 3788999999999988 999999999999986
No 108
>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=97.15 E-value=0.00019 Score=53.92 Aligned_cols=31 Identities=10% Similarity=0.254 Sum_probs=28.5
Q ss_pred eeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 44 SFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 44 SFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
.-++||+|||.+..+.+|+|++||+++|+..
T Consensus 13 ~~~~~Alydy~~~~~~eLs~~~Gd~i~vl~~ 43 (79)
T 1uhc_A 13 NQVYFAVYTFKARNPNELSVSANQKLKILEF 43 (79)
T ss_dssp SCCEEESSCBCCCSSSBCCBCTTCEEEEEES
T ss_pred CeEEEECccCCCCCCCccCCCCCCEEEEEEC
Confidence 4478999999999999999999999999885
No 109
>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=97.14 E-value=0.00021 Score=52.49 Aligned_cols=32 Identities=31% Similarity=0.475 Sum_probs=29.1
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
....++||+|||.+..+.+|+|++||+++| +.
T Consensus 8 ~~~~~~~alydy~~~~~~eLs~~~Gd~i~v-~~ 39 (72)
T 2kgt_A 8 HLGPKYVGLWDFKSRTDEELSFRAGDVFHV-AR 39 (72)
T ss_dssp SCCCEEECCTTCBCSSTTSCBCCTTCCEEE-EE
T ss_pred CCCcEEEEcccCCCCCcCCcCCCCCCEEEE-ee
Confidence 456799999999999999999999999999 75
No 110
>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A
Probab=97.14 E-value=0.0002 Score=51.33 Aligned_cols=30 Identities=17% Similarity=0.476 Sum_probs=27.5
Q ss_pred eEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 45 FHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 45 FYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
+.+||+|||.+..+.+|+|++||++.|+..
T Consensus 2 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 31 (62)
T 2j6f_A 2 VDYIVEYDYDAVHDDELTIRVGEIIRNVKK 31 (62)
T ss_dssp CCEEECSCBCCSSTTBCCBCTTCEEEEEEE
T ss_pred EEEEECccCCcCCcCCcCCcCCCEEEEEEe
Confidence 457999999999999999999999999875
No 111
>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A
Probab=97.14 E-value=0.00024 Score=50.48 Aligned_cols=31 Identities=16% Similarity=0.350 Sum_probs=28.5
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEecc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIE 73 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViD 73 (311)
+.-+++|+|||.+..+.+|+|++||++.|+.
T Consensus 4 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~ 34 (63)
T 3eg3_A 4 DPNLFVALYDFVASGDNTLSITKGEKLRVLG 34 (63)
T ss_dssp CTTEEEESSCBCCCSSSBCCBCTTCEEEEEE
T ss_pred CCEEEEEcceECCCCCCccCCCCCCEEEEEE
Confidence 4468999999999999999999999999987
No 112
>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=97.14 E-value=0.00034 Score=52.32 Aligned_cols=33 Identities=21% Similarity=0.524 Sum_probs=30.1
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
....++||+|||.+..+.+|+|++|||++|++.
T Consensus 5 ~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 37 (78)
T 2yuo_A 5 SSGRRAKALLDFERHDDDELGFRKNDIITIISQ 37 (78)
T ss_dssp CCCEEEEESSCBCCSSTTBCCBCTTCEEEEEEC
T ss_pred CCceEEEECccCCCCCCCCccCCCCCEEEEEEe
Confidence 356789999999999999999999999999985
No 113
>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens}
Probab=97.13 E-value=0.00022 Score=52.78 Aligned_cols=32 Identities=13% Similarity=0.403 Sum_probs=29.3
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
...++||+|||.+..+.+|+|++||++.|++.
T Consensus 6 ~~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~ 37 (72)
T 2jw4_A 6 EEVVVVAKFDYVAQQEQELDIKKNERLWLLDD 37 (72)
T ss_dssp CCEEEECSSCCCCSSTTSCCCCTTCEEEEEEC
T ss_pred CCeEEEECcCCCcCCCCcccCCCCCEEEEEEC
Confidence 34689999999999999999999999999985
No 114
>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}
Probab=97.13 E-value=0.00022 Score=50.31 Aligned_cols=30 Identities=17% Similarity=0.409 Sum_probs=27.5
Q ss_pred eEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 45 FHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 45 FYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
+-+||+|||.+..+.+|+|++||+++|+..
T Consensus 2 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 31 (58)
T 2bz8_A 2 VEAIVEFDYQAQHDDELTISVGEIITNIRK 31 (58)
T ss_dssp CCEEESSCBCCCSTTBCCBCTTCEEEEEEC
T ss_pred EEEEECcccCCCCcCEeeECCCCEEEEEEe
Confidence 457999999999999999999999999885
No 115
>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=97.13 E-value=0.00022 Score=55.38 Aligned_cols=32 Identities=28% Similarity=0.485 Sum_probs=28.9
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
..-++||+|||.+..+.+|+|++|||++|++.
T Consensus 4 ~~~~~~Alydy~a~~~~eLsf~~Gd~i~v~~~ 35 (93)
T 1uff_A 4 GSSGYRALYPFEARNHDEMSFNSGDIIQVDEK 35 (93)
T ss_dssp SCCCEEESSCBCCCSSSCCCBCTTCEEEECSS
T ss_pred CCEEEEECccCCCCCCCCcCCCCCCEEEEeEc
Confidence 34578999999999999999999999999875
No 116
>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A
Probab=97.13 E-value=0.00028 Score=51.21 Aligned_cols=31 Identities=29% Similarity=0.494 Sum_probs=28.6
Q ss_pred eeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 44 SFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 44 SFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
..++||+|||.+..+.+|+|++||+++|+..
T Consensus 6 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 36 (67)
T 2o9s_A 6 TGEAIAKFNFNGDTQVEMSFRKGERITLLRQ 36 (67)
T ss_dssp SEEEEECSCBCCSSTTBCCBCTTCEEEEEEE
T ss_pred CEEEEECccCCcCCcCccCCCCCCEEEEEEe
Confidence 4679999999999999999999999999875
No 117
>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=97.13 E-value=0.00032 Score=52.87 Aligned_cols=33 Identities=18% Similarity=0.425 Sum_probs=30.2
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
....++||+|||.+..+.+|+|++|||++|+..
T Consensus 15 ~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 47 (81)
T 1x43_A 15 SNNRKARVLYDYDAANSTELSLLADEVITVFSV 47 (81)
T ss_dssp CCCEEEEESSCCCCSSTTBCCCCTTCEEEEECC
T ss_pred CCCeEEEEcccCCCCCCCcCCCCCCCEEEEEEc
Confidence 456889999999999999999999999999885
No 118
>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A
Probab=97.12 E-value=0.00029 Score=53.42 Aligned_cols=33 Identities=24% Similarity=0.541 Sum_probs=30.1
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
....++||+|||.+..+.+|+|++||++.|++.
T Consensus 23 ~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 55 (86)
T 2oi3_A 23 SEDIIVVALYDYEAIHHEDLSFQKGDQMVVLEE 55 (86)
T ss_dssp TTSEEEEESSCCCCSSSSCCCCCTTCEEEEEEE
T ss_pred CCCcEEEECccCCCCCCCcCcCCCCCEEEEEEc
Confidence 456799999999999999999999999999875
No 119
>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A
Probab=97.12 E-value=0.00027 Score=51.72 Aligned_cols=33 Identities=24% Similarity=0.442 Sum_probs=29.8
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
....++||+|||.+..+.+|+|++||++.|++.
T Consensus 4 ~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 36 (71)
T 1u5s_A 4 RVLHVVQTLYPFSSVTEEELNFEKGETMEVIEK 36 (71)
T ss_dssp CSSSEEEESSCCCCCSSSBCCCCSSCCEEEEEC
T ss_pred CccEEEEEcccCCCCCCCcccCCCCCEEEEEEC
Confidence 345789999999999999999999999999885
No 120
>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A
Probab=97.12 E-value=0.0003 Score=49.19 Aligned_cols=30 Identities=23% Similarity=0.329 Sum_probs=27.7
Q ss_pred eEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 45 FHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 45 FYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
+.+||+|||.+..+.+|+|++||+++|+..
T Consensus 2 ~~a~al~dy~~~~~~eLs~~~Gd~i~v~~~ 31 (58)
T 4e6r_A 2 IPAFVXFAYVAEREDELSLVXGSRVTVMEX 31 (58)
T ss_dssp EEEEECSCBCCCSTTBCCBCTTCEEEEEEE
T ss_pred EEEEECccCCCCCCCEeeEeCCCEEEEeEc
Confidence 468999999999999999999999999875
No 121
>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}
Probab=97.12 E-value=0.00027 Score=51.45 Aligned_cols=30 Identities=17% Similarity=0.414 Sum_probs=27.9
Q ss_pred eEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 45 FHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 45 FYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
-++||+|||.+..+.+|+|++||++.|++.
T Consensus 7 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 36 (69)
T 4esr_A 7 PTVVALYDYTANRSDELTIHRGDIIRVFFK 36 (69)
T ss_dssp CEEEESSCBCCCSTTBCCBCTTCEEEEEEE
T ss_pred CEEEECccCCCCCcCcCCCCCCCEEEEEEe
Confidence 478999999999999999999999999875
No 122
>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}
Probab=97.12 E-value=0.00034 Score=51.07 Aligned_cols=33 Identities=9% Similarity=0.261 Sum_probs=29.8
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
....++||+|||.+..+.+|+|++||+++|+..
T Consensus 4 ~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 36 (71)
T 2jt4_A 4 KSKKRGIVQYDFMAESQDELTIKSGDKVYILDD 36 (71)
T ss_dssp CCCEEEEECSCBCCSSTTBCCBCTTCEEEEEES
T ss_pred CCCCEEEEcccCCCCCCCcccCCCCCEEEEEEC
Confidence 346789999999999999999999999999875
No 123
>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1
Probab=97.11 E-value=0.00029 Score=51.68 Aligned_cols=32 Identities=19% Similarity=0.477 Sum_probs=28.5
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEecc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIE 73 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViD 73 (311)
....++||+|||.+..+.+|+|++||+++|++
T Consensus 9 ~~~~~~~alydy~~~~~~eLs~~~Gd~i~v~~ 40 (71)
T 1csk_A 9 PSGTECIAKYNFHGTAEQDLPFCKGDVLTIVA 40 (71)
T ss_dssp --CEEEEESSCBCCSSTTBCCBCTTCEEEEEE
T ss_pred CCCCEEEEceeECcCCCCcCCCCCCCEEEEeE
Confidence 45578999999999999999999999999988
No 124
>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1
Probab=97.11 E-value=0.00026 Score=54.56 Aligned_cols=34 Identities=15% Similarity=0.421 Sum_probs=29.6
Q ss_pred CCCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 41 RGDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 41 ~gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
.....++||+|||.+..+.+|+|++|||+.|++.
T Consensus 14 ~~~~~~~~Alydy~a~~~~eLsf~~Gd~i~Vl~~ 47 (83)
T 1neg_A 14 ETGKELVLALYDYQEKSPREVTMKKGDILTLLNS 47 (83)
T ss_dssp ---CCEEEESSCBCCSSTTBCCBCTTCEEEEEEC
T ss_pred CCCceEEEEccccCCCCCCccccCCCCEEEEEEe
Confidence 4677899999999999999999999999999886
No 125
>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.11 E-value=0.00027 Score=53.02 Aligned_cols=31 Identities=23% Similarity=0.493 Sum_probs=28.6
Q ss_pred eeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 44 SFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 44 SFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
.-++||+|||.+..+.+|+|++|||++|++.
T Consensus 17 ~~~~~al~dy~~~~~~eLsf~~Gd~i~v~~~ 47 (78)
T 2ed0_A 17 LEKVVAIYDYTKDKEDELSFQEGAIIYVIKK 47 (78)
T ss_dssp SEEEEECSCBCCSSTTBCCBCSSCEEEEEEE
T ss_pred CEEEEECccCCccCcCcccccCCCEEEEEEe
Confidence 4589999999999999999999999999885
No 126
>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.10 E-value=0.00032 Score=51.05 Aligned_cols=33 Identities=18% Similarity=0.453 Sum_probs=30.2
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
....++||+|||.+..+.+|+|++||+++|+..
T Consensus 5 ~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 37 (70)
T 2ct3_A 5 SSGTPYRAMYQYRPQNEDELELREGDRVDVMQQ 37 (70)
T ss_dssp CCCEEEEESSCBCCSSTTBCCBCTTEEEEEEEE
T ss_pred CCCcEEEECccCCcCCcCCccCCCCCEEEEEEE
Confidence 456789999999999999999999999999886
No 127
>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae}
Probab=97.10 E-value=0.00031 Score=51.44 Aligned_cols=32 Identities=22% Similarity=0.513 Sum_probs=27.8
Q ss_pred CeeEEEeccccCCCCC--CCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEK--GEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~--~~LsFkkGDILhViDT 74 (311)
-.+++||+|||.+..+ .+|+|++|||++|++.
T Consensus 4 ~~~~~~alydy~~~~~~~~eLsf~~Gd~i~v~~~ 37 (70)
T 2vkn_A 4 FIYKAKALYPYDADDDDAYEISFEQNEILQVSDI 37 (70)
T ss_dssp CEEEEEESSCBCCCSSSTTBCCBCTTCEEEEECT
T ss_pred cCEEEEECccCCCCCCCCCcccCCCCCEEEEEEc
Confidence 3578999999999865 4999999999999874
No 128
>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13, protein-protein interaction, structural genomics; NMR {Mus musculus}
Probab=97.10 E-value=0.00023 Score=55.10 Aligned_cols=33 Identities=21% Similarity=0.454 Sum_probs=30.6
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
...+++||+|||.+..+.+|+|++||||+|++.
T Consensus 15 ~~~~~~~alydy~a~~~~eLsf~~Gd~i~v~~~ 47 (93)
T 1wxu_A 15 DDHVVARAEYDFVAVSDEEISFRAGDMLNLALK 47 (93)
T ss_dssp SCBBCEEESSCBCCSSSSBCCBCSSCBCEECCT
T ss_pred CCCEEEEECccCCCCCCCccCcCCCCEEEEEEC
Confidence 467899999999999999999999999999986
No 129
>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}
Probab=97.10 E-value=0.0003 Score=48.93 Aligned_cols=29 Identities=24% Similarity=0.494 Sum_probs=26.8
Q ss_pred EEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 46 HIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 46 YVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
.+||+|||.+..+.+|+|++||++.|+..
T Consensus 2 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 30 (54)
T 2a28_A 2 AMEAIYAYEAQGDDEISIDPGDIITVIRG 30 (54)
T ss_dssp EEEBCSCBCCCSTTBCCBCTTCEEEEEEC
T ss_pred EEEECccCCcCCCCCccCCCCCEEEEEEe
Confidence 37999999999999999999999999875
No 130
>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.09 E-value=0.00028 Score=52.95 Aligned_cols=32 Identities=22% Similarity=0.415 Sum_probs=29.5
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
-..++||+|||.+..+.+|+|++||++.|++.
T Consensus 12 ~~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~ 43 (78)
T 2dl5_A 12 YPLTCKVVYSYKASQPDELTIEEHEVLEVIED 43 (78)
T ss_dssp SSEEEEECSCBCCCSTTBCCBCSSEEEEEEEC
T ss_pred CCcEEEEceeECCCCCCCCCCCCCCEEEEEec
Confidence 44789999999999999999999999999886
No 131
>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}
Probab=97.09 E-value=0.00027 Score=51.54 Aligned_cols=32 Identities=19% Similarity=0.435 Sum_probs=29.1
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
..-++||+|||.+..+.+|+|++||+++|+..
T Consensus 7 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 38 (69)
T 2dil_A 7 GAQEYRALYDYTAQNPDELDLSAGDILEVILE 38 (69)
T ss_dssp CCCEEECCSCBCCSSSSSCCBCTTCEEEEEEC
T ss_pred CCcEEEECccCCccCcCccCCCCCCEEEEEEC
Confidence 44578999999999999999999999999986
No 132
>2kym_A BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI, STE20P PRR, CDC42P-interacting, S signaling protein; NMR {Lodderomyces elongisporus}
Probab=97.09 E-value=0.00026 Score=57.94 Aligned_cols=31 Identities=10% Similarity=0.297 Sum_probs=29.4
Q ss_pred eeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 44 SFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 44 SFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
.+|+||+|||.+..+.+|+|++||++.|++.
T Consensus 3 ~~~~~Alydy~a~~~~ELsf~~Gd~i~vl~~ 33 (120)
T 2kym_A 3 PLFAVTLYEFKAERDDELDVSPGENLSICAH 33 (120)
T ss_dssp CCEEEECSCBCCCSTTCCCBCTTCEEEEEEE
T ss_pred CEEEEEcccCCCCCCCccCCCCCCEEEEEEe
Confidence 5799999999999999999999999999986
No 133
>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=97.08 E-value=0.0002 Score=50.35 Aligned_cols=30 Identities=20% Similarity=0.407 Sum_probs=27.2
Q ss_pred eEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 45 FHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 45 FYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
+.+||+|||.+..+.+|+|++||++.|+..
T Consensus 2 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~ 31 (58)
T 1zuu_A 2 MENKVLYAYVQKDDDEITITPGDKISLVAR 31 (58)
T ss_dssp -CCEECSCBCCCSTTBCCBCTTCCEEEEEC
T ss_pred CEEEEeeeECCcCCCcccCCCCCEEEEeEc
Confidence 457999999999999999999999999875
No 134
>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A
Probab=97.08 E-value=0.00035 Score=53.82 Aligned_cols=34 Identities=12% Similarity=0.344 Sum_probs=30.9
Q ss_pred CCCeeEEEeccccCCCCCC-CcceeeCCeeEeccc
Q psy9828 41 RGDSFHIKTHFNYDQPEKG-EMSFRKGDVFHVIEL 74 (311)
Q Consensus 41 ~gDSFYVRA~FDy~~~~~~-~LsFkkGDILhViDT 74 (311)
+....++||+|||.+..+. +|+|++|||+.|++.
T Consensus 11 ~~~~~~~~alydy~~~~~~~eLsf~~Gd~i~v~~~ 45 (92)
T 1jqq_A 11 PSKLEFARALYDFVPENPEMEVALKKGDLMAILSK 45 (92)
T ss_dssp STTCEEEEESSBBCCSSTTTBCCBCTTCEEEEEEE
T ss_pred CCcCEEEEECccCCCCCCCCCcCCCCCCEEEEEEC
Confidence 4567899999999999998 999999999999886
No 135
>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens}
Probab=97.08 E-value=0.00036 Score=50.62 Aligned_cols=33 Identities=27% Similarity=0.344 Sum_probs=28.9
Q ss_pred CCeeEEEeccccCC-CCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQ-PEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~-~~~~~LsFkkGDILhViDT 74 (311)
...-++||+|||.+ ..+.+|+|++|||+.|++.
T Consensus 4 ~~~~~~~al~dy~a~~~~~eLs~~~Gd~i~v~~~ 37 (67)
T 2kxc_A 4 MKKQKVKTIFPHTAGSNKTLLSFAQGDVITLLIP 37 (67)
T ss_dssp CCCCEEEESSCBCCSSCSSBCCBCTTCEEEESSS
T ss_pred CCCEEEEEeecCCCCCCCCCCcCCCCCEEEEeEC
Confidence 35578999999995 8899999999999999873
No 136
>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...
Probab=97.08 E-value=0.00033 Score=49.62 Aligned_cols=31 Identities=16% Similarity=0.458 Sum_probs=28.5
Q ss_pred eeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 44 SFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 44 SFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
.-++||+|||.+..+.+|+|++||+++|++.
T Consensus 6 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 36 (62)
T 3ngp_A 6 KELVLVLYDYQEKSPRELTVKKGDILTLLNS 36 (62)
T ss_dssp CCEEEECSCBCCCSTTBCCBCTTCEEEEEEC
T ss_pred CEEEEECcCCCCCCCCCccCCCCCEEEEeEe
Confidence 4578999999999999999999999999885
No 137
>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A
Probab=97.08 E-value=0.00028 Score=51.17 Aligned_cols=32 Identities=19% Similarity=0.471 Sum_probs=29.2
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
..-++||+|||.+..+.+|+|++||++.|+..
T Consensus 7 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 38 (67)
T 1aww_A 7 ELKKVVALYDYMPMNANDLQLRKGDEYFILEE 38 (67)
T ss_dssp CCCEEEBSSCCCCSSSSSCCCCSSCEEECCCC
T ss_pred CCeEEEECccCCCCCCCCccCCCCCEEEEEEc
Confidence 44589999999999999999999999999886
No 138
>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A
Probab=97.08 E-value=0.00026 Score=50.35 Aligned_cols=31 Identities=23% Similarity=0.474 Sum_probs=27.3
Q ss_pred eeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 44 SFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 44 SFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
.-++||+|||.+..+.+|+|++||++.|+..
T Consensus 6 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 36 (64)
T 4f14_A 6 LRTYRAMYDYSAQDEDEVSFRDGDYIVNVQP 36 (64)
T ss_dssp --CEEESSCBCCCSTTBCCBCTTCEEEEEEE
T ss_pred CEEEEECeeeCCcCCCcCCCCCCCEEEEEEe
Confidence 3578999999999999999999999999875
No 139
>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.07 E-value=0.00034 Score=51.18 Aligned_cols=31 Identities=16% Similarity=0.414 Sum_probs=28.4
Q ss_pred eeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 44 SFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 44 SFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
.-++||+|||.+..+.+|+|++||++.|++.
T Consensus 7 ~~~~~alydy~~~~~~eLs~~~Gd~i~vl~~ 37 (70)
T 2ct4_A 7 GGHCVAIYHFEGSSEGTISMAEGEDLSLMEE 37 (70)
T ss_dssp SCEEEESSCBCCCSTTCCCBCTTCEEEEEEC
T ss_pred CCEEEEcccCCCCCCCcCCCCCCCEEEEEec
Confidence 3479999999999999999999999999875
No 140
>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} SCOP: b.34.2.1
Probab=97.07 E-value=0.00033 Score=51.42 Aligned_cols=32 Identities=16% Similarity=0.454 Sum_probs=28.7
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
..-++||+|||.+..+.+|+|++|||+.|++.
T Consensus 4 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 35 (73)
T 3thk_A 4 GKELVLALYDYQEKSPREVTMKKGDILTLLNS 35 (73)
T ss_dssp -CCEEEECSCBCCCSTTBCCBCTTCEEEEEEC
T ss_pred CCEEEEECcCCCcCCCCccCCCCCCEEEEEEC
Confidence 34588999999999999999999999999886
No 141
>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.07 E-value=0.00037 Score=53.97 Aligned_cols=33 Identities=12% Similarity=0.344 Sum_probs=30.3
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
....++||+|||.+..+.+|+|++|||++|+..
T Consensus 14 ~~~~~~~Alydy~~~~~~eLs~~~Gd~i~v~~~ 46 (94)
T 2e5k_A 14 ANHETLQVIYPYTPQNDDELELVPGDFIFMSPM 46 (94)
T ss_dssp SCCEEEEECSCBCCSSSSBCCBCTTCEEEECGG
T ss_pred CCCeEEEECCcCCCCCCCCcCCCCCCEEEEEEC
Confidence 466899999999999999999999999999874
No 142
>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A
Probab=97.06 E-value=0.00033 Score=50.62 Aligned_cols=30 Identities=33% Similarity=0.620 Sum_probs=27.5
Q ss_pred eEEEeccccCC-CCCCCcceeeCCeeEeccc
Q psy9828 45 FHIKTHFNYDQ-PEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 45 FYVRA~FDy~~-~~~~~LsFkkGDILhViDT 74 (311)
..+||+|||.+ ..+.+|+|++|||+.|+..
T Consensus 6 ~~~~alydy~~~~~~~eLs~~~Gd~i~v~~~ 36 (65)
T 2j05_A 6 RRVRAILPYTKVPDTDEISFLKGDMFIVHNE 36 (65)
T ss_dssp CEEEESSCBCCCTTSSBCCBCTTCEEEEEEE
T ss_pred cEEEEccccCCCCCCCcCcCCCCCEEEEeEe
Confidence 46899999999 8899999999999999875
No 143
>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1
Probab=97.05 E-value=0.00028 Score=51.29 Aligned_cols=30 Identities=10% Similarity=0.400 Sum_probs=27.9
Q ss_pred eEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 45 FHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 45 FYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
-++||+|||.+..+.+|+|++||++.|+..
T Consensus 3 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 32 (67)
T 1gl5_A 3 EIVVAMYDFQATEAHDLRLERGQEYIILEK 32 (67)
T ss_dssp SCEEECSCBCCSSSSBCCBCTTCEEEEEEC
T ss_pred eEEEECccCCCCCCCeecCCcCCEEEEEEc
Confidence 368999999999999999999999999986
No 144
>2pqh_A Spectrin alpha chain, brain; SH3 domain, chimera, , structural protein; 1.75A {Gallus gallus}
Probab=97.05 E-value=0.00033 Score=52.82 Aligned_cols=30 Identities=17% Similarity=0.482 Sum_probs=27.9
Q ss_pred eEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 45 FHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 45 FYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
-++||+|||.+..+.+|+|++||++.|++.
T Consensus 3 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 32 (80)
T 2pqh_A 3 ELVLALYDYQEKSPREVTMKKGDILTLLNS 32 (80)
T ss_dssp EEEEECSCBCCCSTTBCCBCTTCEEEEEEC
T ss_pred eEEEECccCCCCCCCccCCCCCCEEEEEEe
Confidence 478999999999999999999999999986
No 145
>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1
Probab=97.05 E-value=0.00037 Score=51.21 Aligned_cols=33 Identities=27% Similarity=0.383 Sum_probs=29.1
Q ss_pred CCeeEEEeccccCC-CCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQ-PEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~-~~~~~LsFkkGDILhViDT 74 (311)
....++||+|||.+ ..+.+|+|++|||++|++.
T Consensus 5 ~~~~~~~al~dy~a~~~~~eLs~~~Gd~i~v~~~ 38 (72)
T 1spk_A 5 SSGQKVKTIFPHTAGNNKTLLSFAQGDVLTLLIP 38 (72)
T ss_dssp SCSCEEECSSCBCCSSCSSBCCBCTTCEEEECCS
T ss_pred CCceEEEEeeeeCCCCCCCCCcCCCCCEEEEeEc
Confidence 45578999999995 8899999999999999864
No 146
>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=97.04 E-value=0.0004 Score=53.36 Aligned_cols=34 Identities=24% Similarity=0.428 Sum_probs=30.6
Q ss_pred CCCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 41 RGDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 41 ~gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
.....++||+|||.+..+.+|+|++|||++|++.
T Consensus 14 ~~~~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~ 47 (91)
T 1wx6_A 14 SRVLHVVQTLYPFSSVTEEELNFEKGETMEVIEK 47 (91)
T ss_dssp CCCCEEEEESSCCCCSSSSBCCCCTTCEEEEEEC
T ss_pred CCccEEEEEeecCCcCCCCcccCCCCCEEEEEEC
Confidence 3456899999999999999999999999999875
No 147
>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A
Probab=97.04 E-value=0.00038 Score=51.87 Aligned_cols=30 Identities=17% Similarity=0.484 Sum_probs=27.4
Q ss_pred eEEEeccccCCC--CCCCcceeeCCeeEeccc
Q psy9828 45 FHIKTHFNYDQP--EKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 45 FYVRA~FDy~~~--~~~~LsFkkGDILhViDT 74 (311)
-++||+|||.+. .+.+|+|++|||+.|++.
T Consensus 10 ~~~~alydy~~~~~~~~eLs~~~Gd~i~v~~~ 41 (73)
T 2ebp_A 10 GRARVHTDFTPSPYDTDSLKLKKGDIIDIISK 41 (73)
T ss_dssp EEEEECSCBCCCTTCCSBCCBCSSCEEEEEEC
T ss_pred eEEEEeeccCCCCCCCCccCCCCCCEEEEEEe
Confidence 478999999976 789999999999999986
No 148
>2m0y_A Dedicator of cytokinesis protein 1; apoptosis; NMR {Mus musculus}
Probab=97.02 E-value=0.00026 Score=52.12 Aligned_cols=32 Identities=28% Similarity=0.485 Sum_probs=29.4
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
..-|+||+|||.+..+.+|+|++||+++|++.
T Consensus 10 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 41 (74)
T 2m0y_A 10 EEKYGVAFYNYDARGADELSLQIGDTVHILET 41 (74)
T ss_dssp CCSCEEECSEECCCSSSBCCEETTEEEEEEEB
T ss_pred CCeEEEEceeeCCCCcCcccCCCCCEEEEEEc
Confidence 45689999999999999999999999999885
No 149
>3o5z_A Phosphatidylinositol 3-kinase regulatory subunit; SRC homology 3 domain, protein binding; 2.01A {Homo sapiens} SCOP: b.34.2.0 PDB: 2kt1_A
Probab=97.01 E-value=0.0005 Score=53.26 Aligned_cols=33 Identities=15% Similarity=0.405 Sum_probs=30.4
Q ss_pred CCCeeEEEeccccCCCCCCCcceeeCCeeEecc
Q psy9828 41 RGDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIE 73 (311)
Q Consensus 41 ~gDSFYVRA~FDy~~~~~~~LsFkkGDILhViD 73 (311)
....+.+||+|||.++.+.+|+|++|||+.|+.
T Consensus 8 ~~~~~~~~Alydy~a~~~~ELsf~~GD~I~V~~ 40 (90)
T 3o5z_A 8 GPEGFQYRALYPFRRERPEDLELLPGDVLVVSR 40 (90)
T ss_dssp CCSEEEEEECSCBCCCSTTBCCBCTTCEEEEEH
T ss_pred CCCCcEEEEeeeECCCCCCccCCcCCCEEEEEe
Confidence 467889999999999999999999999999984
No 150
>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=97.01 E-value=0.00031 Score=54.96 Aligned_cols=34 Identities=15% Similarity=0.402 Sum_probs=30.4
Q ss_pred CCCeeEEEeccccCCCC------CCCcceeeCCeeEec-cc
Q psy9828 41 RGDSFHIKTHFNYDQPE------KGEMSFRKGDVFHVI-EL 74 (311)
Q Consensus 41 ~gDSFYVRA~FDy~~~~------~~~LsFkkGDILhVi-DT 74 (311)
.+...++||+|||++.. +.+|+|++|||++|+ +.
T Consensus 14 ~~~~~~~~Alydy~~~~~~~~~~~~eLsf~~Gd~i~v~~~~ 54 (96)
T 1wie_A 14 SGKVHLCVARYSYNPFDGPNENPEAELPLTAGKYLYVYGDM 54 (96)
T ss_dssp TSCEEEEEESSCCCGGGSSCSCTTTBCCCCTTCEEEEESSC
T ss_pred CCCCcEEEECCccCCCcccCCCCCCeeeECCCCEEEEeEec
Confidence 46778999999999987 899999999999999 53
No 151
>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}
Probab=97.01 E-value=0.00037 Score=52.02 Aligned_cols=30 Identities=10% Similarity=0.336 Sum_probs=28.0
Q ss_pred eEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 45 FHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 45 FYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
-++||+|||.+..+.+|+|++||++.|++.
T Consensus 6 ~~~~Alydy~a~~~~eLs~~~Gd~i~v~~~ 35 (73)
T 2lcs_A 6 QRAVALYDFEPENDNELRLAEGDIVFISYK 35 (73)
T ss_dssp EEEEESSCBCCSSTTBCCBCTTCEEEEEEE
T ss_pred CEEEECccCCCCCCCccCCcCCCEEEEEEE
Confidence 478999999999999999999999999886
No 152
>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.00 E-value=0.00039 Score=52.69 Aligned_cols=31 Identities=35% Similarity=0.632 Sum_probs=28.2
Q ss_pred eeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 44 SFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 44 SFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
.-+++|+|||.+..+.+|+|++||||.|++.
T Consensus 17 ~~~~~Alydy~~~~~~eLsf~~Gd~i~v~~~ 47 (81)
T 1x6g_A 17 GTQCITKCEHTRPKPGELAFRKGDVVTILEA 47 (81)
T ss_dssp TCEEEESSCBSSCCTTCCCBCTTCEEEEEEC
T ss_pred CCEEEECCCCCcCCCCCCCCCCCCEEEEEec
Confidence 3468999999999999999999999999885
No 153
>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus}
Probab=97.00 E-value=0.00033 Score=51.46 Aligned_cols=31 Identities=13% Similarity=0.142 Sum_probs=28.0
Q ss_pred eeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 44 SFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 44 SFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
.-++||+|||.+..+.+|+|++|||+.|+..
T Consensus 6 ~~~~~al~~y~~~~~~eLs~~~Gd~i~v~~~ 36 (71)
T 2fpf_A 6 EQTHRAIFRFVPRHEDELELEVDDPLLVELQ 36 (71)
T ss_dssp CCCEEECSCBCCSSTTBCCBCTTCEEEEEEE
T ss_pred CeEEEECeeECccCCCcccCcCCcEEEEeEe
Confidence 3478999999999999999999999999875
No 154
>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus}
Probab=96.99 E-value=0.00037 Score=50.76 Aligned_cols=32 Identities=16% Similarity=0.266 Sum_probs=29.2
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
..-++||+|||.+..+.+|+|++||+++|++.
T Consensus 6 ~~~~~~al~~y~~~~~~eLs~~~Gd~i~v~~~ 37 (70)
T 2cuc_A 6 SGNMFVALHTYSAHRPEELDLQKGEGIRVLGK 37 (70)
T ss_dssp SSCCEECCSCBCCCSTTBCCBCTTCEEEEEEE
T ss_pred CCcEEEECeeECcCCCCcCCCCCCCEEEEEEe
Confidence 45688999999999999999999999999885
No 155
>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=96.99 E-value=0.00036 Score=51.16 Aligned_cols=32 Identities=19% Similarity=0.390 Sum_probs=28.6
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
..-++||+|||.+..+.+|+|++|||++|++.
T Consensus 7 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 38 (69)
T 1uhf_A 7 GGEEYIALYPYSSVEPGDLTFTEGEEILVTQK 38 (69)
T ss_dssp CSEEEECSSCBCCSSSSBCCBCTTCEEEECEE
T ss_pred CCCEEEEeeeECCCCcCccCCCCCCEEEEEEe
Confidence 34578999999999999999999999999875
No 156
>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.98 E-value=0.00038 Score=52.33 Aligned_cols=34 Identities=18% Similarity=0.345 Sum_probs=31.0
Q ss_pred CCCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 41 RGDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 41 ~gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
..+..++||+|||.+..+.+|+|++|||++|+..
T Consensus 14 ~~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 47 (79)
T 1x6b_A 14 KGDLPQVEITKAFFAKQADEVTLQQADVVLVLQQ 47 (79)
T ss_dssp CSSCCEEEESSCCCCCSSSBCCCCTTEEEEEEEE
T ss_pred CCCCCEEEECeeECCCCcCCcCCCCCCEEEEEEe
Confidence 4567899999999999999999999999999875
No 157
>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.97 E-value=0.00041 Score=51.73 Aligned_cols=31 Identities=16% Similarity=0.187 Sum_probs=28.0
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
..-++||+|||.+. +.+|+|++|||++|++.
T Consensus 9 ~~~~~~alydy~~~-~~eLs~~~Gd~i~vl~~ 39 (75)
T 2egc_A 9 LKDVYVSIADYEGD-EETAGFQEGVSMEVLER 39 (75)
T ss_dssp CCEEEEECSCBCCC-SSSCCBCTTCEEEECEE
T ss_pred CCeEEEECCCcCCC-CCcCCCCCCCEEEEEEc
Confidence 44678999999998 99999999999999885
No 158
>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.97 E-value=0.00038 Score=53.58 Aligned_cols=32 Identities=28% Similarity=0.348 Sum_probs=29.7
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
..+++||+|||.+..+.+|+|++|||++|++.
T Consensus 16 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 47 (88)
T 2cub_A 16 LNMPAYVKFNYMAEREDELSLIKGTKVIVMEK 47 (88)
T ss_dssp CCEEEEESSCCCCCSTTBCCCCTTEEEEEEEE
T ss_pred CCCEEEEccccCCCCCCCcCCCCCCEEEEEEc
Confidence 45789999999999999999999999999986
No 159
>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.96 E-value=0.00043 Score=50.33 Aligned_cols=32 Identities=13% Similarity=0.322 Sum_probs=29.0
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
...++||+|||.+..+.+|+|++||++.|+..
T Consensus 6 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 37 (68)
T 1x2p_A 6 SGEEFVAIADYAATDETQLSFLRGEKILILRQ 37 (68)
T ss_dssp SCCEEEESSCCCCSSTTBCCCCTTCEEEEEEC
T ss_pred CCCEEEECceECCCCcCCcCCCCCCEEEEEEc
Confidence 44678999999999999999999999999885
No 160
>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=96.96 E-value=0.00049 Score=53.75 Aligned_cols=33 Identities=21% Similarity=0.489 Sum_probs=30.3
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
....++||+|||.+..+.+|+|++|||++|++.
T Consensus 32 ~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 64 (98)
T 1udl_A 32 HPVCQVIAMYDYAANNEDELSFSKGQLINVMNK 64 (98)
T ss_dssp CCSEEEEESSCCCCSSTTSCCCCTTCEEEECBC
T ss_pred CCceEEEECCCCCCCCCCccCCcCCCEEEEEEe
Confidence 356889999999999999999999999999986
No 161
>1bb9_A Amphiphysin 2; transferase, SH3 domain; 2.20A {Rattus norvegicus} SCOP: b.34.2.1 PDB: 1muz_A 1mv0_B
Probab=96.95 E-value=0.00052 Score=55.94 Aligned_cols=33 Identities=27% Similarity=0.578 Sum_probs=30.1
Q ss_pred CCCeeEEEeccccCCCCCCCcceeeCCeeEecc
Q psy9828 41 RGDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIE 73 (311)
Q Consensus 41 ~gDSFYVRA~FDy~~~~~~~LsFkkGDILhViD 73 (311)
.+-..++||+|||.+..+.+|+|++|||+.|+.
T Consensus 41 ~~~~~~~~Alydy~a~~~dELsf~~GDiI~Vl~ 73 (115)
T 1bb9_A 41 PGFMFKVQAQHDYTATDTDELQLKAGDVVLVIP 73 (115)
T ss_dssp TTCCEEEEESSCBCCSSTTBCCBCTTCEEEEEC
T ss_pred CCcceEEEECCccCCCCCCccCcCCCCEEEEee
Confidence 345688999999999999999999999999998
No 162
>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A
Probab=96.95 E-value=0.00039 Score=52.63 Aligned_cols=30 Identities=20% Similarity=0.597 Sum_probs=27.9
Q ss_pred eEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 45 FHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 45 FYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
-++||+|||.+..+.+|+|++||++.|++.
T Consensus 6 ~~~~Alydy~~~~~~eLs~~~Gd~i~vl~~ 35 (79)
T 3cqt_A 6 TLFEALYDYEARTEDDLSFHKGEKFQILNS 35 (79)
T ss_dssp CCEEESSCBCCCSTTBCCBCTTCEEEEEEC
T ss_pred cEEEECccCCCCCcCcCCCCCCCEEEEEEe
Confidence 378999999999999999999999999875
No 163
>3i5r_A Phosphatidylinositol 3-kinase regulatory subunit alpha; SH3 domain, peptide complex, alternative splicing, disease mutation, HOST-virus interaction, phosphoprotein, polymorphism; 1.70A {Homo sapiens} SCOP: b.34.2.1 PDB: 3i5s_A 1pht_A 1pnj_A 2pni_A 1pks_A 1pkt_A
Probab=96.94 E-value=0.00056 Score=51.79 Aligned_cols=32 Identities=13% Similarity=0.543 Sum_probs=29.5
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEecc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIE 73 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViD 73 (311)
...+.+||+|||.+..+.+|+|++||++.|++
T Consensus 3 ~~~~~~~Alydy~~~~~~eLs~~~Gd~I~V~~ 34 (83)
T 3i5r_A 3 AEGYQYRALYDYKKEREEDIDLHLGDILTVNK 34 (83)
T ss_dssp CEEEEEEECSCBCCCSTTBCCBCTTCEEEEEH
T ss_pred CCCcEEEEccccCCCCCCccccCCCCEEEEee
Confidence 45789999999999999999999999999985
No 164
>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=96.93 E-value=0.00045 Score=53.82 Aligned_cols=33 Identities=21% Similarity=0.415 Sum_probs=29.6
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
...-++||+|||.+..+.+|+|++|||+.|++.
T Consensus 27 ~~~~~~~Alydy~a~~~~ELsf~~GD~I~Vl~~ 59 (89)
T 2rf0_A 27 PAGPVWTAVFDYEAAGDEELTLRRGDRVQVLSQ 59 (89)
T ss_dssp -CCCEEEECSCBCCSSTTBCCBCTTCEEEEEEC
T ss_pred CCCcEEEECCccCCCCCCccccCCCCEEEEEec
Confidence 456789999999999999999999999999875
No 165
>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens}
Probab=96.93 E-value=0.00039 Score=53.30 Aligned_cols=32 Identities=9% Similarity=0.385 Sum_probs=29.2
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
...++||+|||.+..+.+|+|++||++.|++.
T Consensus 30 ~~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~ 61 (86)
T 2jxb_A 30 EEVIVIAKWDYTAQQDQELDIKKNERLWLLDD 61 (86)
T ss_dssp CCEEEEESSCCCCCSSSBCCCCTTEEEEEEEC
T ss_pred CceEEEECccCCCCCCCEeccCCCCEEEEEec
Confidence 34789999999999999999999999999875
No 166
>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.93 E-value=0.00032 Score=51.66 Aligned_cols=32 Identities=31% Similarity=0.591 Sum_probs=28.7
Q ss_pred CeeEEEeccccCC-CCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQ-PEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~-~~~~~LsFkkGDILhViDT 74 (311)
....+||+|||.+ ..+.+|+|++|||+.|++.
T Consensus 6 ~~~~~~Alydy~~~~~~~eLsf~~Gd~i~v~~~ 38 (71)
T 2gqi_A 6 SGRRVRAILPYTKVPDTDEISFLKGDMFIVHNE 38 (71)
T ss_dssp SCCCEEESSCCCCCTTSSCCCCCTTCBCCCCEE
T ss_pred CCCEEEECcccCCCCCCCCCCCCCCCEEEEEEe
Confidence 4467899999999 8899999999999999875
No 167
>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.92 E-value=0.00049 Score=50.34 Aligned_cols=32 Identities=28% Similarity=0.313 Sum_probs=29.0
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
..-++||+|||.+..+.+|+|++|||+.|++.
T Consensus 7 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 38 (71)
T 2dnu_A 7 GEEKYVTVQPYTSQSKDEIGFEKGVTVEVIRK 38 (71)
T ss_dssp CSEEEECSSCBCCSSTTBCCBCTTCEEEECCC
T ss_pred CCCEEEECCccCCCCCCCCcCCCCCEEEEeEC
Confidence 34578999999999999999999999999886
No 168
>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.92 E-value=0.00041 Score=54.27 Aligned_cols=33 Identities=21% Similarity=0.365 Sum_probs=29.2
Q ss_pred CCeeEEEeccccCCC--------CCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQP--------EKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~--------~~~~LsFkkGDILhViDT 74 (311)
....++||+|||.+. .+.+|+|++||||+|++.
T Consensus 15 ~~~~~~~Alydy~~~~~~~~~~~~~~eLsf~~Gd~i~vl~~ 55 (97)
T 2csq_A 15 LPARIFVALFDYDPLTMSPNPDAAEEELPFKEGQIIKVYGD 55 (97)
T ss_dssp CCCEEEECSSCBCTTTTSSCHHHHTTBCCBCTTCEEEEEEE
T ss_pred CCceEEEEccccCCCcccccCCCCCCccCCCCCCEEEEEEe
Confidence 356789999999998 689999999999999964
No 169
>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A
Probab=96.91 E-value=0.00019 Score=53.72 Aligned_cols=33 Identities=9% Similarity=0.340 Sum_probs=30.0
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
.+..++||+|||.+..+.+|+|++||++.|++.
T Consensus 18 ~~~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~ 50 (77)
T 1awj_A 18 PEETLVIALYDYQTNDPQELALRCDEEYYLLDS 50 (77)
T ss_dssp CSSSCCCCCCCBCCCCTTSCCBCSSSCCSCCCT
T ss_pred CCceEEEECccCCCCCcCCcCCCCCCEEEEEEe
Confidence 355789999999999999999999999999986
No 170
>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A
Probab=96.91 E-value=0.0002 Score=52.67 Aligned_cols=32 Identities=22% Similarity=0.431 Sum_probs=29.2
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
...++||+|||.+..+.+|+|++|||++|+..
T Consensus 5 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 36 (71)
T 1hsq_A 5 FKCAVKALFDYKAQREDELTFIKSAIIQNVEK 36 (71)
T ss_dssp SSSCCCCSSCCCCSSSSSCCCCTTCCCBSCCC
T ss_pred CCeEEEECCCCCcCCCCccCCCCCCEEEEEEe
Confidence 34688999999999999999999999999886
No 171
>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens}
Probab=96.88 E-value=0.00054 Score=52.53 Aligned_cols=30 Identities=27% Similarity=0.465 Sum_probs=28.2
Q ss_pred eEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 45 FHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 45 FYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
.+++|+|||.+..+.+|+|++||++.|++.
T Consensus 4 ~~~~Alydy~~~~~~eLs~~~Gd~i~v~~~ 33 (90)
T 3reb_B 4 IIVVALYDYVSWSPDDLSFQKGDQMVVLEE 33 (90)
T ss_dssp CEEEESSCBCCSSTTBCCBCTTCEEEEEEC
T ss_pred EEEEECCccCcCCcCcCCCCCCCEEEEEEe
Confidence 589999999999999999999999999985
No 172
>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A
Probab=96.88 E-value=0.00062 Score=47.65 Aligned_cols=29 Identities=17% Similarity=0.462 Sum_probs=26.5
Q ss_pred EEEecccc-CCCCCCCcceeeCCeeEeccc
Q psy9828 46 HIKTHFNY-DQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 46 YVRA~FDy-~~~~~~~LsFkkGDILhViDT 74 (311)
.+||+||| .+..+.+|+|++||++.|+..
T Consensus 2 ~~~al~d~~~~~~~~eLs~~~Gd~i~v~~~ 31 (58)
T 1zuy_A 2 MFEAAYDFPGSGSPSELPLKKGDVIYITRE 31 (58)
T ss_dssp EEEESSCBCCCSCTTBCCBCTTCEEEEEEE
T ss_pred EEEEecccCCCCCCCcCCCCCCCEEEEEEe
Confidence 47999999 788899999999999999875
No 173
>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens}
Probab=96.84 E-value=0.00036 Score=53.41 Aligned_cols=34 Identities=24% Similarity=0.433 Sum_probs=31.1
Q ss_pred CCCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 41 RGDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 41 ~gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
+....++||+|||.+..+.+|+|++|||+.|++.
T Consensus 15 ~~~~~~~~Alydy~a~~~~eLsf~~Gd~I~Vl~~ 48 (79)
T 1z9q_A 15 RMAAPRAEALFDFTGNSKLELNFKAGDVIFLLSR 48 (79)
T ss_dssp CSSCCCEEESSCCCCSSTTBCCCCTTCCBCCCEE
T ss_pred CCCceEEEEcCccCCCCCCcccccCCCEEEEeEe
Confidence 5677889999999999999999999999999875
No 174
>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus}
Probab=96.83 E-value=0.0007 Score=53.46 Aligned_cols=34 Identities=24% Similarity=0.551 Sum_probs=31.0
Q ss_pred CCCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 41 RGDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 41 ~gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
.....++||+|||.+..+.+|+|++|||++|++.
T Consensus 24 ~~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 57 (109)
T 2yt6_A 24 TGGVTIFVALYDYEARTTEDLSFKKGERFQIINN 57 (109)
T ss_dssp CSSCCEEEESSCCCCSSTTSCCCCTTCEEEEEEC
T ss_pred CCCCEEEEECccCCCCCCCccCCCCCCEEEEEEc
Confidence 3467899999999999999999999999999985
No 175
>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.83 E-value=0.00068 Score=52.14 Aligned_cols=32 Identities=22% Similarity=0.361 Sum_probs=29.1
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
....+||+|||.+..+.+|+|++|||++|+..
T Consensus 16 ~~~~~~alydy~~~~~~eLsf~~Gd~i~v~~~ 47 (90)
T 2yup_A 16 EYGEAVAQYTFKGDLEVELSFRKGEHICLIRK 47 (90)
T ss_dssp GSEEEEECSCCCCCSSSBCCCCTTCEEEESSC
T ss_pred cceEEEEeecCCcCCcCcCCCCCCCEEEEEEE
Confidence 34678999999999999999999999999985
No 176
>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 3ua7_A 3ua6_A 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A ...
Probab=96.82 E-value=0.00059 Score=52.22 Aligned_cols=31 Identities=23% Similarity=0.557 Sum_probs=28.7
Q ss_pred eeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 44 SFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 44 SFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
.-++||+|||.+..+.+|+|++||++.|++.
T Consensus 6 ~~~~~Alydy~a~~~~eLsf~~Gd~i~vl~~ 36 (84)
T 4ag1_C 6 VTLFVALYDYNATRWTDLSFHKGEKFQILEF 36 (84)
T ss_dssp CCEEEESSCBCCSBTTBCCBCTTCEEEEEEC
T ss_pred CEEEEEcccCCCCCCCcccccCCCEEEEEEe
Confidence 4588999999999999999999999999985
No 177
>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A
Probab=96.81 E-value=0.00071 Score=49.28 Aligned_cols=29 Identities=14% Similarity=0.465 Sum_probs=26.5
Q ss_pred EEEeccccC-CCCCCCcceeeCCeeEeccc
Q psy9828 46 HIKTHFNYD-QPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 46 YVRA~FDy~-~~~~~~LsFkkGDILhViDT 74 (311)
.+||+|||. +..+.+|+|++||++.|+..
T Consensus 4 ~~~alydy~~~~~~~eLs~~~Gd~i~v~~~ 33 (69)
T 1ruw_A 4 KFEAAYDFPGSGSSSELPLKKGDIVFISRD 33 (69)
T ss_dssp EEEESSCBCCCSCTTBCCBCTTCEEEEEEE
T ss_pred EEEEccccCCCCCCCcccCCCCCEEEEEEe
Confidence 479999995 88999999999999999875
No 178
>1i1j_A Melanoma derived growth regulatory protein; SH3 subdomain, hormone/growth factor complex; 1.39A {Homo sapiens} SCOP: b.34.2.1 PDB: 1k0x_A 1hjd_A
Probab=96.81 E-value=0.00067 Score=54.91 Aligned_cols=32 Identities=16% Similarity=0.172 Sum_probs=29.2
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
--.++||+|||.+..+.+|+|++|||+.|++.
T Consensus 21 ~~~~~~Alydy~a~~~~ELsf~~GDiI~Vl~k 52 (108)
T 1i1j_A 21 PISMAVALQDYMAPDCRFLTIHRGQVVYVFSK 52 (108)
T ss_dssp CSEEEEESSCBCCSSTTBCCBCTTCEEEEEEE
T ss_pred eeeEEEECCccCCCCCCccccCCCCEEEEEEe
Confidence 34689999999999999999999999999875
No 179
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus}
Probab=96.81 E-value=0.0022 Score=53.73 Aligned_cols=88 Identities=13% Similarity=0.182 Sum_probs=56.9
Q ss_pred cchHHHHHHHhcCCEEEEecCccccccccccCcccEEEEEcCCCHHHH-HHHHccC--Ccc-------------cCCCcc
Q psy9828 90 IRLSAIRDMMDRGRHGLLDITPNAVDRLNYAQFYPIVIFLRAETKSNV-KELRAGI--PKL-------------NSAQFF 153 (311)
Q Consensus 90 TSl~AVr~ViekGKhCILDV~pqaVkrL~~a~l~PIVIFIkPpS~e~L-KeLR~~l--~e~-------------~~~hlF 153 (311)
+..+.+++++++|+.||+|+...+...++.....+++||+.||+.+.+ +.++.|. .++ .+...+
T Consensus 85 ~~~~~i~~~l~~g~~vv~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~Rl~~R~~~~~~~~~~rl~~~~~~~~~~~~~ 164 (207)
T 2j41_A 85 TPVQYVKDTMDEGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLEHLRERLVGRGTESDEKIQSRINEARKEVEMMNLY 164 (207)
T ss_dssp EEHHHHHHHHHTTCEEEEECCGGGHHHHHHHCTTSEEEEEECCC---------------------------CGGGGGGGC
T ss_pred CCHHHHHHHHHcCCeEEEEECHHHHHHHHHhcCCeEEEEEECCCHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhccccC
Confidence 456788989999999999999888877764333578999998886555 3333332 111 123567
Q ss_pred eEEEecCCccchhhhhhccccHHHHHHHHHHHhcC
Q psy9828 154 SVVIFLRAETKSNVKELRAGIPNYIKTISLINFNG 188 (311)
Q Consensus 154 d~vI~nddl~~~~~~~~~~~~~~y~~Lk~~I~~eQ 188 (311)
|.+|.|++.++ ++.+++++|..+.
T Consensus 165 d~vI~n~~~e~-----------~~~~i~~~l~~~~ 188 (207)
T 2j41_A 165 DYVVVNDEVEL-----------AKNRIQCIVEAEH 188 (207)
T ss_dssp SEEEECSSHHH-----------HHHHHHHHHHHHH
T ss_pred CEEEECCCHHH-----------HHHHHHHHHHHhh
Confidence 88888876555 8889988887654
No 180
>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens}
Probab=96.80 E-value=0.00068 Score=53.12 Aligned_cols=33 Identities=18% Similarity=0.371 Sum_probs=30.1
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
....++||+|||.+..+.+|+|++|||+.|++.
T Consensus 16 ~~~~~~~Alydy~a~~~~eLsf~~Gd~i~V~~~ 48 (92)
T 2o2o_A 16 RRRRRCQVAFSYLPQNDDELELKVGDIIEVVGE 48 (92)
T ss_dssp CSSCEEEECSCBCCCSSSCCCBCSSCEEECCCG
T ss_pred CCCeEEEEccccCCCCCccccccCCCEEEEeEe
Confidence 455789999999999999999999999999986
No 181
>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}
Probab=96.79 E-value=0.00072 Score=49.02 Aligned_cols=32 Identities=22% Similarity=0.442 Sum_probs=28.7
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
....++|+|||.+..+.+|+|++|||+.|+..
T Consensus 9 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 40 (68)
T 1s1n_A 9 TGEEYIAVGDFTAQQVGDLTFKKGEILLVIEK 40 (68)
T ss_dssp CCEEEEECSCBCCSSSSCCCBCSSEEEEECSC
T ss_pred CCCEEEEcccCCCCCCCcCCCCCCCEEEEEEc
Confidence 44667899999999999999999999999886
No 182
>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A
Probab=96.79 E-value=0.0018 Score=56.30 Aligned_cols=32 Identities=34% Similarity=0.778 Sum_probs=30.0
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
...++||+|||.+..+.+|+|++|||++|++.
T Consensus 157 ~~~~~~al~~y~~~~~~eL~~~~Gd~i~v~~~ 188 (217)
T 1gri_A 157 QPTYVQALFDFDPQEDGELGFRRGDFIHVMDN 188 (217)
T ss_dssp CCCEEEESSCCCCSSTTBCCCCTTCEEEEEEC
T ss_pred CceEEEecCCccCCCCCcCCCCCCCEEEEEEe
Confidence 56899999999999999999999999999886
No 183
>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.73 E-value=0.00087 Score=50.56 Aligned_cols=32 Identities=25% Similarity=0.320 Sum_probs=28.6
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
..-++||+|||.+..+.+|+|++|||+.|++.
T Consensus 7 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~ 38 (80)
T 2ekh_A 7 GATSYMTCSAYQKVQDSEISFPAGVEVQVLEK 38 (80)
T ss_dssp SCEEEEECSCBCCSSTTSCCBCTTCEEEEEEE
T ss_pred CCCEEEECCCCCCCCCCccCcCCCCEEEEEEe
Confidence 34567899999999999999999999999886
No 184
>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis, membrane, phagocytosis; NMR {Homo sapiens}
Probab=96.69 E-value=0.00082 Score=54.92 Aligned_cols=32 Identities=22% Similarity=0.358 Sum_probs=29.6
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
...|+||+|||.+..+.+|+|++|||++|++.
T Consensus 58 ~~~~~~Alydy~a~~~~eLsf~~Gd~i~vl~~ 89 (119)
T 2rqr_A 58 KERHGVAIYNFQGSGAPQLSLQIGDVVRIQET 89 (119)
T ss_dssp CCEEEEBCSCBCCCSTTBCCBCTTCEEEEEEE
T ss_pred CceEEEEccccCCCCCCcccCcCCCEEEEEEc
Confidence 45799999999999999999999999999885
No 185
>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.62 E-value=0.00076 Score=49.24 Aligned_cols=32 Identities=31% Similarity=0.419 Sum_probs=28.8
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
..-.+||+|||.+..+.+|+|++||+++|+..
T Consensus 7 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 38 (70)
T 2ega_A 7 GLEQYVVVSNYKKQENSELSLQAGEVVDVIEK 38 (70)
T ss_dssp CCBCEECCSCCCCCSSSSCCCCTTCBCEEEEE
T ss_pred CCcEEEECceECCCCCCcccCCCCCEEEEEEc
Confidence 44568999999999999999999999999886
No 186
>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic}
Probab=96.62 E-value=0.00063 Score=50.27 Aligned_cols=28 Identities=18% Similarity=0.354 Sum_probs=25.7
Q ss_pred EEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 46 HIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 46 YVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
..||+|||.+ .+.+|+|++||+++|++.
T Consensus 2 ~a~alydy~~-~~~eLs~~~Gd~i~v~~~ 29 (73)
T 2kxd_A 2 GAPPLPPYSA-GGREVTMKKGDILTLLNS 29 (73)
T ss_dssp CCCCCCSSCC-CSCCCCBCTTCEEEEEEC
T ss_pred eEEEeeeeCC-CCCEeeEcCCCEEEEEEe
Confidence 4799999998 899999999999999986
No 187
>1mv3_A MYC box dependent interacting protein 1; tumor suppressor, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=96.52 E-value=0.0016 Score=58.90 Aligned_cols=33 Identities=27% Similarity=0.578 Sum_probs=30.3
Q ss_pred CCCeeEEEeccccCCCCCCCcceeeCCeeEecc
Q psy9828 41 RGDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIE 73 (311)
Q Consensus 41 ~gDSFYVRA~FDy~~~~~~~LsFkkGDILhViD 73 (311)
.+-.+++||+|||.+..+.+|+|++||||+|+.
T Consensus 139 ~~~~~~~rALYdY~a~~~dELSf~~GDiI~Vl~ 171 (213)
T 1mv3_A 139 PGFMFKVQAQHDYTATDTDELQLKAGDVVLVIP 171 (213)
T ss_dssp TTCCEEEEESSCBCCCSTTCCCBCSSCEEEECC
T ss_pred CCcceEEEECCCcCCCCCCcCCcCCCCEEEEee
Confidence 355689999999999999999999999999998
No 188
>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A*
Probab=96.44 E-value=0.0015 Score=55.61 Aligned_cols=32 Identities=19% Similarity=0.521 Sum_probs=28.8
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
..-+++|+|||.+..+.+|+|++||+|.|++.
T Consensus 11 ~~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~ 42 (175)
T 4d8k_A 11 QDNLVIALHSYEPSHDGDLGFEKGEQLRILEQ 42 (175)
T ss_dssp --CEEEESSCBCCCSSSBCCBCTTCEEEEEEC
T ss_pred CCcEEEEccCcCCcCCcccccccCCEEEEEcc
Confidence 34689999999999999999999999999997
No 189
>2kbt_A Chimera of proto-oncogene VAV, linker, immunoglobulin G-binding protein G; sortase, protein ligation, intein, inset, solubility enhancement; NMR {Mus musculus}
Probab=96.29 E-value=0.0023 Score=53.86 Aligned_cols=33 Identities=18% Similarity=0.516 Sum_probs=29.6
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
+..-++||+|||.+..+.+|+|++|||+.|+..
T Consensus 3 ~~~~~~~Alydy~a~~~~ELsf~~Gd~i~Vl~~ 35 (142)
T 2kbt_A 3 GTFGTAKARYDFCARDRSELSLKEGDIIKILNK 35 (142)
T ss_dssp CCCCEEEESSCCCCSSSSBCCCCTTCEEEEEEC
T ss_pred CcCeEEEECCccCCCCCCcCCCCCCCEEEEEEe
Confidence 445689999999999999999999999999874
No 190
>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans}
Probab=96.24 E-value=0.0023 Score=54.51 Aligned_cols=32 Identities=9% Similarity=0.303 Sum_probs=29.4
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
..-++||+|||.+..+.+|+|++|||+.|++.
T Consensus 117 ~~~~~~alydy~~~~~~eLsf~~Gd~i~v~~~ 148 (174)
T 3qwx_X 117 IIEVVVGTFKFTGERETDLPFEQGERLEILSK 148 (174)
T ss_dssp CSEEEEESSCBCCSSTTBCCBCTTCEEEEEEC
T ss_pred cccEEEEecCcccCCCCccccccCCEEEEEEc
Confidence 45689999999999999999999999999985
No 191
>3jv3_A Intersectin-1; SH3 domain, DH domain, guanine nucleotide exchange factor, autoinhibition, domain-swapped, cell junction, cell project endocytosis; 2.40A {Mus musculus} PDB: 3gf9_A
Probab=95.69 E-value=0.0058 Score=54.78 Aligned_cols=31 Identities=23% Similarity=0.567 Sum_probs=29.2
Q ss_pred eeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 44 SFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 44 SFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
+.+++|+|||.+..+.+|+|++||+++|++.
T Consensus 2 ~~~~~a~~~~~~~~~~el~~~~gd~i~v~~~ 32 (283)
T 3jv3_A 2 SCQVIGMYDYTAQNDDELAFSKGQIINVLNK 32 (283)
T ss_dssp CEEEEESSCBCCSSTTBCCBCTTCEEEEEEC
T ss_pred CeEEEEccccCCCCCCcCCCCCCCEEEEEec
Confidence 4689999999999999999999999999988
No 192
>3a98_A DOCK2, dedicator of cytokinesis protein 2; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens}
Probab=95.63 E-value=0.0058 Score=53.19 Aligned_cols=32 Identities=22% Similarity=0.358 Sum_probs=29.3
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
...|.+|+|||.+..+.+|+|++||+++|+..
T Consensus 16 ~~~~~~Alydf~~~~~~eLs~~~Gd~i~v~~~ 47 (184)
T 3a98_A 16 KERHGVAIYNFQGSGAPQLSLQIGDVVRIQET 47 (184)
T ss_dssp SCCEEEESSCBCCSSTTBCCBCTTCEEEEEEE
T ss_pred CceEEEEeeeeCCCCCCCCCcCCCCEEEEEec
Confidence 34589999999999999999999999999886
No 193
>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B
Probab=95.25 E-value=0.0089 Score=51.97 Aligned_cols=32 Identities=25% Similarity=0.389 Sum_probs=29.4
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
..-++||+|||.+..+.+|+|++|||+.|+..
T Consensus 10 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~ 41 (193)
T 1ng2_A 10 ILQTYRAIADYEKTSGSEMALSTGDVVEVVEK 41 (193)
T ss_dssp CCEEEECSSCBCCSSTTCCCBCTTCEEEEEEC
T ss_pred cCcEEEEcCCcCCCCCCcCCCCCCCEEEEEEe
Confidence 45678999999999999999999999999986
No 194
>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A
Probab=95.21 E-value=0.0043 Score=55.41 Aligned_cols=32 Identities=16% Similarity=0.594 Sum_probs=29.0
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
..-++||+|||.+..+.+|+|++|||+.|++.
T Consensus 135 ~~~~~~al~dy~~~~~~eLsf~~Gd~i~v~~~ 166 (230)
T 2dvj_A 135 EAEYVRALFDFNGNDEEDLPFKKGDILRIRDK 166 (230)
T ss_dssp CCCCCBCCSCCCCSSSSSCCCCSSCBCCCCBC
T ss_pred cceeEEEeeeecCCCCCCccCcCCCEEEEEEc
Confidence 34689999999999999999999999999885
No 195
>1u3o_A Huntingtin-associated protein-interacting protein; SH3, CIS-proline,, signaling protein; NMR {Rattus norvegicus}
Probab=95.09 E-value=0.012 Score=46.18 Aligned_cols=32 Identities=16% Similarity=0.324 Sum_probs=28.3
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
|... +.|++||.+..+.+|+|++||+|.|++.
T Consensus 16 ~~e~-~valydF~Ar~~~ELS~~kGd~vevle~ 47 (82)
T 1u3o_A 16 GCEL-TVVLQDFSAAHSSELSIQVGQTVELLER 47 (82)
T ss_dssp CCEE-EECSSCBCCCSTTCCCBCTTCEEEESSC
T ss_pred CceE-EEEEeeecCCCCCeeeEcCCCEEEEEec
Confidence 4444 6899999999999999999999999986
No 196
>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus} SCOP: b.34.2.1
Probab=95.02 E-value=0.01 Score=44.07 Aligned_cols=32 Identities=13% Similarity=0.277 Sum_probs=27.0
Q ss_pred CeeEEEeccccCCCC---CCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPE---KGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~---~~~LsFkkGDILhViDT 74 (311)
...++++.++|.++. +.+|+|++|||++|++.
T Consensus 14 ~~~~~~a~~~~~~~~~~~~~eLsf~~Gd~i~v~~~ 48 (78)
T 1k1z_A 14 KMEVFQEYYGIPPPPGAFGGFLRLNPGDIVELTKA 48 (78)
T ss_dssp CEEECSCBSSCSCCSSSSCCCCCBCTTCEEEEEEC
T ss_pred cEEEEEECCCCCCCCCCCCCccCCCCCCEEEEEEc
Confidence 567788888888753 68999999999999885
No 197
>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}
Probab=94.97 E-value=0.012 Score=54.53 Aligned_cols=32 Identities=9% Similarity=0.303 Sum_probs=29.5
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
...++||+|||.+..+.+|+|++|||++|++.
T Consensus 146 ~~~~~~al~dy~~~~~~eLsf~~Gd~i~v~~~ 177 (308)
T 3qwy_A 146 IIEVVVGTFKFTGERETDLPFEQGERLEILSK 177 (308)
T ss_dssp CCEEEEESSCBCCSSTTBCCBCTTCEEEEEEC
T ss_pred cceeEEEeceEcCCCCCcCcCCCCCEEEEEEc
Confidence 35689999999999999999999999999986
No 198
>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A
Probab=94.83 E-value=0.013 Score=50.90 Aligned_cols=29 Identities=21% Similarity=0.626 Sum_probs=24.7
Q ss_pred EEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 46 HIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 46 YVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
-+||+|||.+..+.+|+|++||++.|++.
T Consensus 2 ~~~al~~~~~~~~~eLs~~~Gd~i~v~~~ 30 (217)
T 1gri_A 2 EAIAKYDFKATADDELSFKRGDILKVLNE 30 (217)
T ss_dssp EEEECSCBCCCSSSCCCBCTTCEEEC---
T ss_pred EEEEeeccCCcCCCcCCCCCCCEEEEEec
Confidence 37999999999999999999999999875
No 199
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=94.82 E-value=0.017 Score=55.96 Aligned_cols=34 Identities=21% Similarity=0.430 Sum_probs=31.9
Q ss_pred CCCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 41 RGDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 41 ~gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
.+...++||+|||.+..+.+|+|++|||+.|++.
T Consensus 27 ~~~~~~~~al~~~~~~~~~eL~~~~gd~i~v~~~ 60 (466)
T 2pz1_A 27 DGSVVCAEALWDHVTMDDQELGFKAGDVIEVMDA 60 (466)
T ss_dssp TTCCEEEEESSCBCCCCTTBCCBCTTCEEEEEEC
T ss_pred CCCccEEEEccccCCCCCCcCCCCCCCEEEEEEe
Confidence 4668999999999999999999999999999987
No 200
>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B
Probab=94.81 E-value=0.018 Score=50.05 Aligned_cols=32 Identities=22% Similarity=0.209 Sum_probs=29.3
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
...+++|+|||.+..+.+|+|++|||+.|++.
T Consensus 80 ~~~~~~al~dy~a~~~~eLs~~~Gd~i~vl~~ 111 (193)
T 1ng2_A 80 AGEPYVAIKAYTAVEGDEVSLLEGEAVEVIHK 111 (193)
T ss_dssp TCEEEEESSCBCCCSTTBCCBCTTCEEEEEEC
T ss_pred cceeeeeccccCCCCCCcccccCCCEEEEEEe
Confidence 34678999999999999999999999999986
No 201
>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A
Probab=94.79 E-value=0.014 Score=54.08 Aligned_cols=32 Identities=16% Similarity=0.594 Sum_probs=29.3
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
...++||+|||.+..+.+|+|++|||+.|++.
T Consensus 133 ~~~~~~alydy~~~~~~eLsf~~Gd~i~v~~~ 164 (304)
T 2eyz_A 133 EAEYVRALFDFNGNDEEDLPFKKGDILRIRDK 164 (304)
T ss_dssp CCCEEEECSCCCCSCSSSCCCCTTCEEEEEEC
T ss_pred cceeEEEEeeecCCCCCcCcccCCCEEEEEEe
Confidence 35689999999999999999999999999884
No 202
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=94.40 E-value=0.021 Score=54.58 Aligned_cols=29 Identities=17% Similarity=0.575 Sum_probs=27.6
Q ss_pred EEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 46 HIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 46 YVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
+++|+|||.+..+.+|+|++||++.|++.
T Consensus 4 ~~~al~~~~~~~~~el~~~~gd~~~v~~~ 32 (452)
T 1fmk_A 4 TFVALYDYESRTETDLSFKKGERLQIVNN 32 (452)
T ss_dssp EEEESSCBCCCSSSBCCBCTTCEEEESCC
T ss_pred EEEECCccCCCCCCCCCccCCCEEEEecc
Confidence 68999999999999999999999999987
No 203
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=94.36 E-value=0.018 Score=56.58 Aligned_cols=32 Identities=16% Similarity=0.489 Sum_probs=28.0
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
..-+++|+|||++..+.+|+|++|||+.|++.
T Consensus 84 ~~~~~~alyd~~~~~~~el~~~~gd~i~v~~~ 115 (535)
T 2h8h_A 84 GVTTFVALYDYESRTETDLSFKKGERLQIVNN 115 (535)
T ss_dssp ---CEEESSCBCCCSSSBCCBCTTCEEEEEEC
T ss_pred CCcEEEEccccCCcCCCcCCcCCCCEEEEEEe
Confidence 44679999999999999999999999999987
No 204
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=94.23 E-value=0.022 Score=54.37 Aligned_cols=33 Identities=18% Similarity=0.481 Sum_probs=29.7
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
...-+++|+|||++..+.+|+|++||++.|++.
T Consensus 9 ~~~~~~~aly~~~~~~~~el~~~~gd~i~v~~~ 41 (450)
T 1k9a_A 9 PSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAV 41 (450)
T ss_dssp CTTCEEEESSCBCCSSSSBCCBCTTCEEEEEEE
T ss_pred CCCCEEEECCCcCccCCCcCCCCCCCEEEEeec
Confidence 345589999999999999999999999999885
No 205
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=94.19 E-value=0.023 Score=55.11 Aligned_cols=33 Identities=15% Similarity=0.333 Sum_probs=28.2
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
+..-+++|+|||++..+.+|+|++||++.|++.
T Consensus 41 ~~~~~~~alyd~~~~~~~els~~~gd~~~v~~~ 73 (495)
T 1opk_A 41 NDPNLFVALYDFVASGDNTLSITKGEKLRVLGY 73 (495)
T ss_dssp ---CEEEESSCBCCCSTTBCCBCTTCEEEEEEE
T ss_pred CCCcEEEEeCCcCCCCCCCCCccCCCEEEEeec
Confidence 345689999999999999999999999999865
No 206
>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens}
Probab=94.16 E-value=0.023 Score=53.46 Aligned_cols=31 Identities=23% Similarity=0.465 Sum_probs=28.9
Q ss_pred eeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 44 SFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 44 SFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
.-++||+|||++..+.+|+|++|||+.|++.
T Consensus 174 ~~~~~alydy~~~~~~eLsf~~Gd~i~v~~~ 204 (341)
T 2dyb_A 174 APRAEALFDFTGNSKLELNFKAGDVIFLLSR 204 (341)
T ss_dssp CCEEEESSCBCCSSSSBCCBCTTCEEEEEEE
T ss_pred CcEEEEEEeeCCCCCCcCCccCCCEEEEEEe
Confidence 4579999999999999999999999999986
No 207
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=94.16 E-value=0.025 Score=53.98 Aligned_cols=33 Identities=27% Similarity=0.531 Sum_probs=29.9
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
+..-+++|+|||.+..+.+|+|++||++.|++.
T Consensus 6 ~~~~~~~al~~~~~~~~~el~~~~gd~~~v~~~ 38 (454)
T 1qcf_A 6 GIRIIVVALYDYEAIHHEDLSFQKGDQMVVLEE 38 (454)
T ss_dssp CCCCEEEESSCBCCCSTTBCCBCTTCEEEEEEC
T ss_pred CCCeEEEECcccCCcCCCcCcccCCCEEEEEec
Confidence 445589999999999999999999999999986
No 208
>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*
Probab=92.79 E-value=0.012 Score=54.67 Aligned_cols=32 Identities=19% Similarity=0.537 Sum_probs=29.3
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
...++||+|||.+..+.+|+|++|||+.|++.
T Consensus 124 ~~~~~~alydy~~~~~~eLsf~~Gd~i~v~~~ 155 (303)
T 2lqn_A 124 NLEYVRTLYDFPGNDAEDLPFKKGEILVIIEK 155 (303)
Confidence 34689999999999999999999999999986
No 209
>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A
Probab=93.27 E-value=0.054 Score=39.12 Aligned_cols=17 Identities=12% Similarity=0.272 Sum_probs=15.0
Q ss_pred CCCcceeeCCeeEeccc
Q psy9828 58 KGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 58 ~~~LsFkkGDILhViDT 74 (311)
+.+|+|++|||++|++.
T Consensus 24 ~~eLsf~~Gd~i~v~~~ 40 (70)
T 1gcq_C 24 GPFLRLNPGDIVELTKA 40 (70)
T ss_dssp SCBCCBCTTCEEEEEEC
T ss_pred CCcCCcCCCCEEEEEeC
Confidence 35999999999999885
No 210
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=92.92 E-value=0.018 Score=56.71 Aligned_cols=31 Identities=26% Similarity=0.599 Sum_probs=0.0
Q ss_pred eeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 44 SFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 44 SFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
.+++||+|||.+..+.+|+|++||||.|++.
T Consensus 428 ~~~~~alydy~~~~~~eLsf~~Gd~i~vl~~ 458 (486)
T 3haj_A 428 EVRVRALYDYEGQEHDELSFKAGDELTKMED 458 (486)
T ss_dssp -------------------------------
T ss_pred CeEEEEccccCCCCCCcCccCCCCEEEEEEe
Confidence 6789999999999999999999999999874
No 211
>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A
Probab=92.71 E-value=0.031 Score=51.81 Aligned_cols=32 Identities=9% Similarity=0.181 Sum_probs=28.3
Q ss_pred CeeEEEeccccC--CCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYD--QPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~--~~~~~~LsFkkGDILhViDT 74 (311)
...|+||+|||. +..+.+|+|++|||+.|+..
T Consensus 236 ~~~~~~al~d~~~~a~~~~eL~~~~Gd~i~v~~~ 269 (304)
T 2eyz_A 236 GPIYARVIQKRVPNAYDKTALALEVGELVKVTKI 269 (304)
T ss_dssp CCCCSCCSSCBCCCTTCSSCCCBCTTSCCEEEEE
T ss_pred CCEEEEEeeeecCCCCCCCeecccCCCEEEEEEe
Confidence 457999999999 45789999999999999985
No 212
>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*
Probab=91.21 E-value=0.029 Score=51.98 Aligned_cols=32 Identities=16% Similarity=0.203 Sum_probs=27.8
Q ss_pred CeeEEEeccccCCCC--CCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPE--KGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~--~~~LsFkkGDILhViDT 74 (311)
...|+||+|||.++. +.+|+|++|||+.|+..
T Consensus 236 ~~~~~~alydy~~~~~~~~eLs~~~Gd~i~v~~~ 269 (303)
T 2lqn_A 236 GPVFAKAIQKRVPCAYDKTALALEVGDIVKVTRM 269 (303)
Confidence 357999999998655 67999999999999985
No 213
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens}
Probab=91.44 E-value=0.088 Score=53.10 Aligned_cols=30 Identities=13% Similarity=0.204 Sum_probs=27.9
Q ss_pred eEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 45 FHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 45 FYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
-.+||+|||.++.+.||+|++|||+.|++.
T Consensus 443 ~~~~aly~y~a~~~dELs~~~GD~i~v~~~ 472 (526)
T 2de0_X 443 HNQIAIYAHQPRTADEIPMEPGDIIGVAGN 472 (526)
T ss_dssp CEEEECSCBCCSSTTBCCBCTTCEEEEEEE
T ss_pred cceEEeecCCCCCCCcCCcCCCCEEEEccc
Confidence 557999999999999999999999999876
No 214
>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}
Probab=91.22 E-value=0.078 Score=54.67 Aligned_cols=34 Identities=26% Similarity=0.231 Sum_probs=28.7
Q ss_pred CCCeeEEEeccccC---CCCCCCcceeeCCeeEeccc
Q psy9828 41 RGDSFHIKTHFNYD---QPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 41 ~gDSFYVRA~FDy~---~~~~~~LsFkkGDILhViDT 74 (311)
..+|-|+.|++||. ++.+..|+|++|||+.|++.
T Consensus 570 k~rs~~~~Al~d~~~~~~~~~~~L~f~kGDlI~l~~~ 606 (655)
T 3pvl_A 570 RKRSKYVVALQDNPNPAGEESGFLSFAKGDLIILDHD 606 (655)
T ss_dssp HHHCCEEEESSCCCC-----CCBCCCCTTCEEEESSC
T ss_pred hhcchhhhHHhhcccCCCCCCCcccccCCCEEEEccc
Confidence 57999999999998 56789999999999999875
No 215
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=89.16 E-value=0.25 Score=41.43 Aligned_cols=34 Identities=12% Similarity=0.420 Sum_probs=30.1
Q ss_pred CCCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 41 RGDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 41 ~gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
++..-++||+|+|++..+.+|+|++||++.|.+.
T Consensus 11 p~~~~~~~al~d~~~~~~~el~~~~Gd~~~v~~~ 44 (222)
T 3ehr_A 11 PGQVKVFRALYTFEPRTPDELYIEEGDIIYITDM 44 (222)
T ss_dssp --CCEEEEESSCCCCSSTTBCCCCTTCEEEEEEC
T ss_pred CCCceEEEEeCCcCCCCCCcccccCCCEEEEecc
Confidence 5667788999999999999999999999999987
No 216
>1v1c_A Obscurin; muscle, sarcomere, adapter, myogenesis, SH3-domain; NMR {Homo sapiens}
Probab=84.58 E-value=0.57 Score=35.75 Aligned_cols=27 Identities=19% Similarity=0.405 Sum_probs=23.0
Q ss_pred EeccccC--CCCCCCcceeeCCeeEeccc
Q psy9828 48 KTHFNYD--QPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 48 RA~FDy~--~~~~~~LsFkkGDILhViDT 74 (311)
||..||. +....+|+++.||+++|++-
T Consensus 9 ~v~aDy~p~~~~~~ei~lk~Gd~VeVl~k 37 (71)
T 1v1c_A 9 VVTADYLPLGAEQDAITLREGQYVEVLDA 37 (71)
T ss_dssp EESSCBCCCSCCTTBCCBCTTCEEEEEEE
T ss_pred EEEecccccCCCcceeeecCCCEEEEEEc
Confidence 6788995 45578999999999999986
No 217
>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}
Probab=84.47 E-value=0.19 Score=46.42 Aligned_cols=31 Identities=16% Similarity=0.226 Sum_probs=0.0
Q ss_pred eeEEEeccccCCCC--CCCcceeeCCeeEeccc
Q psy9828 44 SFHIKTHFNYDQPE--KGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 44 SFYVRA~FDy~~~~--~~~LsFkkGDILhViDT 74 (311)
..|.||+|||.+.. +.+|+|++|||+.|+..
T Consensus 247 ~~~a~alyd~~~~~~~~~ELs~~~Gd~i~v~~~ 279 (308)
T 3qwy_A 247 PAKAKVTFDRVPNAYDPTQLRVKKGQTVLVTQK 279 (308)
T ss_dssp ---------------------------------
T ss_pred ccccccccccccccCCcccceeCCCCEEEEEEE
Confidence 57899999996654 59999999999999875
No 218
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B*
Probab=82.04 E-value=0.78 Score=41.76 Aligned_cols=72 Identities=14% Similarity=0.202 Sum_probs=46.0
Q ss_pred chHHHHHHHhcCCEEEEecCccccc---cc----cccCccc-EEEEEcCCCHHH---HHHHH---------ccCCc-c--
Q psy9828 91 RLSAIRDMMDRGRHGLLDITPNAVD---RL----NYAQFYP-IVIFLRAETKSN---VKELR---------AGIPK-L-- 147 (311)
Q Consensus 91 Sl~AVr~ViekGKhCILDV~pqaVk---rL----~~a~l~P-IVIFIkPpS~e~---LKeLR---------~~l~e-~-- 147 (311)
....|++.+++|+.+|||+..++.. .+ +...+.- +++|+.||+... ++.++ .+.+. +
T Consensus 99 ~~~~v~~~l~~g~~vIld~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~p~~~~~l~~~~Rl~~R~~~g~l~~R~~~~e~~ 178 (287)
T 1gvn_B 99 TEAIISRLSDQGYNLVIEGTGRTTDVPIQTATMLQAKGYETKMYVMAVPKINSYLGTIERYETMYADDPMTARATPKQAH 178 (287)
T ss_dssp HHHHHHHHHHHTCCEEECCCCCCSHHHHHHHHHHHTTTCEEEEEEECCCHHHHHHHHHHHHHHHHHHCTTTCCCCCHHHH
T ss_pred HHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHhCCCcEEEEEEECCHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 4467788888999999999998865 32 2223322 456777777653 33332 23331 1
Q ss_pred --------------cCCCcceEEEecCCc
Q psy9828 148 --------------NSAQFFSVVIFLRAE 162 (311)
Q Consensus 148 --------------~~~hlFd~vI~nddl 162 (311)
.+...||.+++|++.
T Consensus 179 ~~i~~rl~~a~~el~~~~~~d~v~v~d~~ 207 (287)
T 1gvn_B 179 DIVVKNLPTNLETLHKTGLFSDIRLYNRE 207 (287)
T ss_dssp HHHHHHHHHHHHHHHHHTCCSCEEEECTT
T ss_pred HHHHHHHHHHHHHHHcCCCCCeEEEEeCC
Confidence 025789999999886
No 219
>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus}
Probab=81.54 E-value=0.6 Score=34.42 Aligned_cols=19 Identities=21% Similarity=0.508 Sum_probs=16.9
Q ss_pred CCCCCcceeeCCeeEeccc
Q psy9828 56 PEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 56 ~~~~~LsFkkGDILhViDT 74 (311)
..+.+|+|++|||+.|++.
T Consensus 3 ~~~~eLs~~~Gd~i~v~~~ 21 (77)
T 2jmc_A 3 MGPREVTMKKGDILTLLNS 21 (77)
T ss_dssp SSSCCCCCCTTCEEECCCC
T ss_pred cCCCccCCCCCCEEEEEEe
Confidence 4578999999999999986
No 220
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=80.84 E-value=1.9 Score=34.48 Aligned_cols=40 Identities=40% Similarity=0.710 Sum_probs=31.9
Q ss_pred CCCCCCHHHHHHHHh--cCCCcEEEEEEeChhHHHHHHhccC
Q psy9828 2 DMKGITREEAVLFLL--SLQDQIHLIVQNRRDEYEHVVASQR 41 (311)
Q Consensus 2 dlr~~T~EEA~~~L~--~~~~~VtL~vq~~~~~Y~~i~~~~~ 41 (311)
++.++++++++..|. ..++.|+|.++.+++.|+.+++++.
T Consensus 82 ~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~~~~~~~~g~ 123 (124)
T 3tsv_A 82 DFTNIIREEAVLFLLDLPKGEEVTILAQKKKDVYRRIVESDV 123 (124)
T ss_dssp ECSSCCHHHHHHHHHHSCTTCEEEEEEEECHHHHHHHTC---
T ss_pred ECCCCCHHHHHHHHHhcCCCCEEEEEEEECCchhhhhHhccC
Confidence 466788899999888 4668999999999999999877643
No 221
>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1
Probab=80.59 E-value=0.71 Score=32.73 Aligned_cols=18 Identities=22% Similarity=0.580 Sum_probs=16.0
Q ss_pred CCCCcceeeCCeeEeccc
Q psy9828 57 EKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 57 ~~~~LsFkkGDILhViDT 74 (311)
.+.+|+|++|||+.|++.
T Consensus 2 ~~~eLs~~~Gd~i~v~~~ 19 (63)
T 1tuc_A 2 GPREVTMKKGDILTLLNS 19 (63)
T ss_dssp CCCCCCBCTTCEEEEEEC
T ss_pred CccccCCCCCCEEEEEEe
Confidence 357999999999999986
No 222
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=79.90 E-value=1.3 Score=33.62 Aligned_cols=27 Identities=7% Similarity=0.176 Sum_probs=24.7
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEe
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQN 28 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~ 28 (311)
++.++|++||+..|+..+..|+|++..
T Consensus 54 ~v~~~~~~evv~llr~~g~~V~L~v~p 80 (82)
T 1r6j_A 54 NVIGLKDSQIADILSTSGTVVTITIMP 80 (82)
T ss_dssp ECTTCCHHHHHHHHHHSCSEEEEEEEE
T ss_pred EcCCCCHHHHHHHHhcCCCEEEEEEEe
Confidence 688999999999999989999999874
No 223
>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus}
Probab=76.18 E-value=1.3 Score=32.59 Aligned_cols=23 Identities=9% Similarity=0.215 Sum_probs=20.7
Q ss_pred eeEEEeccccCCCCCCCcceeeC
Q psy9828 44 SFHIKTHFNYDQPEKGEMSFRKG 66 (311)
Q Consensus 44 SFYVRA~FDy~~~~~~~LsFkkG 66 (311)
..+++|+|||.++.+.+|+|+.-
T Consensus 52 ~~~~~alydy~a~~~dElsf~~~ 74 (77)
T 2jmc_A 52 KELVLALYDYQESGDNAPSYSPP 74 (77)
T ss_dssp CCEEEESSCCCCSSCCCCCSCCC
T ss_pred CceEEECCCcCCCCCCccccCCC
Confidence 57999999999999999999863
No 224
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=75.86 E-value=4.1 Score=30.67 Aligned_cols=35 Identities=23% Similarity=0.472 Sum_probs=31.2
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeChhHHHHH
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNRRDEYEHV 36 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~~~~Y~~i 36 (311)
++.+++.++++..+...+++++|.++.+++.|..+
T Consensus 67 ~v~~~~~~~~~~~~~~~~~~v~l~v~r~~~~~~~~ 101 (104)
T 3i4w_A 67 DLRNASHEQAAIALKNAGQTVTIIAQYKPEEYSRF 101 (104)
T ss_dssp ECTTCCHHHHHHHHHTSCSEEEEEEEECHHHHHHH
T ss_pred ECCCCCHHHHHHHHHcCCCeEEEEEEECcchhhhh
Confidence 46788999999999999999999999999988765
No 225
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=75.09 E-value=4.7 Score=30.76 Aligned_cols=37 Identities=22% Similarity=0.392 Sum_probs=32.2
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeChhHHHHHHh
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNRRDEYEHVVA 38 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~~~~Y~~i~~ 38 (311)
++.+++.++++..|....+.++|.++.+++.|..+-.
T Consensus 71 ~v~~~~~~~~~~~~~~~~~~v~l~v~r~~~~~~~~~~ 107 (113)
T 1um7_A 71 NLRNATHEQAAAALKRAGQSVTIVAQYRPEEYSRFES 107 (113)
T ss_dssp BCTTCCHHHHHHHHHSCCSEEEEEEECCHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHhCCCcEEEEEEECcchhhhhhc
Confidence 5678889999999998889999999999999987743
No 226
>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A
Probab=74.57 E-value=2.9 Score=35.32 Aligned_cols=75 Identities=12% Similarity=0.129 Sum_probs=53.0
Q ss_pred cchHHHHHHHhcCCEEEEecCccccccccccCcccEEEEEcCCCHHHHHHH-HccCC---------------cccCCCcc
Q psy9828 90 IRLSAIRDMMDRGRHGLLDITPNAVDRLNYAQFYPIVIFLRAETKSNVKEL-RAGIP---------------KLNSAQFF 153 (311)
Q Consensus 90 TSl~AVr~ViekGKhCILDV~pqaVkrL~~a~l~PIVIFIkPpS~e~LKeL-R~~l~---------------e~~~~hlF 153 (311)
++...+++.+++++.|+++++..++..+.........+|+..|+...|.|- ..+.. +-.+.+-+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~lS~l~~~p~~~~LDep~~~l~~~~d~~~~~~l~~~l~~l~~~~g~ 179 (207)
T 1znw_A 100 TLAQPVRAAAATGVPVLIEVDLAGARAIKKTMPEAVTVFLAPPSWQDLQARLIGRGTETADVIQRRLDTARIELAAQGDF 179 (207)
T ss_dssp EEHHHHHHHHHHTCCEEEECCHHHHHHHHHHCTTSEEEEEECSCHHHHHHHHHTTSCSCHHHHHHHHHHHHHHHHGGGGS
T ss_pred CcHHHHHHHHHcCCeEEEEeCHHHHHHHHHhcCCcEEEEEECCCHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhhhccC
Confidence 456778888889999999999888877655544556688888888777552 22211 00123457
Q ss_pred eEEEecCCccc
Q psy9828 154 SVVIFLRAETK 164 (311)
Q Consensus 154 d~vI~nddl~~ 164 (311)
+.+++++|++.
T Consensus 180 tvi~vtHdl~~ 190 (207)
T 1znw_A 180 DKVVVNRRLES 190 (207)
T ss_dssp SEEEECSSHHH
T ss_pred cEEEECCCHHH
Confidence 99999999998
No 227
>1ri9_A FYN-binding protein; SH3-like, helically extended, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=68.84 E-value=1.7 Score=35.15 Aligned_cols=17 Identities=18% Similarity=0.501 Sum_probs=15.9
Q ss_pred CCCcceeeCCeeEeccc
Q psy9828 58 KGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 58 ~~~LsFkkGDILhViDT 74 (311)
..+|+|++||+|.|+++
T Consensus 55 ~~DLpfkkGE~LeVI~~ 71 (102)
T 1ri9_A 55 TRDLQVKPGESLEVIQT 71 (102)
T ss_dssp TTBCCCCTTCBCEEEEE
T ss_pred cccCCcCCCCEEEEEEe
Confidence 57999999999999997
No 228
>2gtj_A FYN-binding protein; SH3, redox, signaling protein; NMR {Homo sapiens} PDB: 2gto_A
Probab=67.82 E-value=2.2 Score=34.15 Aligned_cols=42 Identities=19% Similarity=0.290 Sum_probs=28.8
Q ss_pred HHHHHHhcc-CCCee-EEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 32 EYEHVVASQ-RGDSF-HIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 32 ~Y~~i~~~~-~gDSF-YVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
+|++..+-. .-..+ -++|+.+ .......|+|++||+|.|+++
T Consensus 14 e~rkkFk~~g~~~vl~~a~a~~~-~k~g~~dLp~~~GE~LeII~~ 57 (96)
T 2gtj_A 14 EIKKKFKLTGPIQVIHLAKACCD-VKGGKNELSFKQGEQIEIIRI 57 (96)
T ss_dssp HHHHHHTCSSCCCCCEEEEESSC-EECTTSCCEECTTCCEEEEEC
T ss_pred HHHHHhccCCCceeEEEEEEeec-CCCCcccCCcCCCCEEEEEEc
Confidence 455554432 22334 4688877 444578999999999999996
No 229
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=61.02 E-value=5.7 Score=33.71 Aligned_cols=33 Identities=18% Similarity=0.403 Sum_probs=29.1
Q ss_pred CCeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 42 GDSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 42 gDSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
.+.-.++++|+|.+..+.+|+|++||++.|...
T Consensus 168 ~~~~~~~al~d~~~~~~~eLa~~~G~~i~vl~~ 200 (239)
T 1ycs_B 168 MNKGVIYALWDYEPQNDDELPMKEGDCMTIIHR 200 (239)
T ss_dssp TGGGEEEESSCBCCSSTTBCCBCSSCEEEECCC
T ss_pred cccceEEEEeccCCCCCCcccccCCCEEEEEEe
Confidence 355678999999999999999999999999875
No 230
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=57.59 E-value=9.3 Score=27.71 Aligned_cols=27 Identities=22% Similarity=0.325 Sum_probs=23.9
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEe
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQN 28 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~ 28 (311)
++.++++++++..|.+.+++++|.+++
T Consensus 60 ~v~~~~~~~~~~~~~~~~~~v~l~v~~ 86 (87)
T 4e34_A 60 NLRDTKHKEAVTILSQQRGEIEFEVVY 86 (87)
T ss_dssp ECTTCCHHHHHHHHHHCCSEEEEEEEE
T ss_pred ECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 467889999999999999999999885
No 231
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=57.52 E-value=7 Score=28.97 Aligned_cols=30 Identities=10% Similarity=0.194 Sum_probs=25.2
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeChh
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNRRD 31 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~~~ 31 (311)
++.++|++|++..|....++|+|.+...+.
T Consensus 53 ~v~~~~~~~~~~~i~~~~~~v~L~v~~~~~ 82 (88)
T 3e17_A 53 VTENMSLTDARKLIEKSRGKLQLVVLRDLE 82 (88)
T ss_dssp ECTTCCHHHHHHHHHHTTTEEEEEECCC--
T ss_pred ECCCCCHHHHHHHHHcCCCeEEEEEeCCCc
Confidence 467899999999999999999999986665
No 232
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=52.68 E-value=9.4 Score=30.07 Aligned_cols=26 Identities=12% Similarity=0.169 Sum_probs=21.8
Q ss_pred CCCCCCHHHHHHHHhcCC--CcEEEEEE
Q psy9828 2 DMKGITREEAVLFLLSLQ--DQIHLIVQ 27 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~--~~VtL~vq 27 (311)
++.+++++|++.+|++.+ .+++|++.
T Consensus 60 ~v~g~~h~evv~lLk~~~~g~~~~L~lv 87 (95)
T 3gge_A 60 NIVGWRHYDVAKKLKELKKEELFTMKLI 87 (95)
T ss_dssp ECTTCCHHHHHHHHHHSCTTCEEEEEEE
T ss_pred EccCCCHHHHHHHHHhCCCCCEEEEEEE
Confidence 578999999999999977 46777765
No 233
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=50.55 E-value=13 Score=28.14 Aligned_cols=30 Identities=20% Similarity=0.220 Sum_probs=25.8
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeChh
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNRRD 31 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~~~ 31 (311)
++.+++.+||+..|+...+.|+|.+.....
T Consensus 67 ~v~~~~~~~~~~~l~~~~~~v~l~v~~~~~ 96 (103)
T 2dc2_A 67 NLRDTKHKEAVTILSQQRGEIEFEVVYVAL 96 (103)
T ss_dssp ESTTSCHHHHHHHHHHCCSEEEEEEEECC-
T ss_pred ECCCCCHHHHHHHHHhCCCcEEEEEEecCC
Confidence 577889999999999999999999996654
No 234
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=48.18 E-value=18 Score=27.92 Aligned_cols=35 Identities=23% Similarity=0.472 Sum_probs=30.1
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeChhHHHHH
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNRRDEYEHV 36 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~~~~Y~~i 36 (311)
++.+++.++++..+...++.++|.++.+++.|..+
T Consensus 70 ~v~~~~~~~~~~~~~~~~~~v~l~v~r~~~~~~~~ 104 (119)
T 1tp5_A 70 DLRNASHEQAAIALKNAGQTVTIIAQYKPEEYSRF 104 (119)
T ss_dssp ECTTCCHHHHHHHHHTSCSEEEEEEEECHHHHHTT
T ss_pred ECCCCCHHHHHHHHHcCCCeEEEEEEECCchhccc
Confidence 46778889999999998999999999999888654
No 235
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=47.13 E-value=19 Score=28.21 Aligned_cols=34 Identities=12% Similarity=0.252 Sum_probs=28.6
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeChhHHHH
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNRRDEYEH 35 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~~~~Y~~ 35 (311)
++.+++.++++..|....+.|+|.+..+.+.+..
T Consensus 83 ~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~~~~~ 116 (124)
T 2daz_A 83 ILYGRSHQNASAIIKTAPSKVKLVFIRNEDAVNQ 116 (124)
T ss_dssp BCTTSCHHHHHHHHHHSCSEEEEEEEECTTHHHH
T ss_pred ECCCCCHHHHHHHHHcCCCeEEEEEEeCCCcccc
Confidence 5678899999999998889999999987765544
No 236
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=46.16 E-value=17 Score=29.24 Aligned_cols=30 Identities=13% Similarity=0.256 Sum_probs=25.1
Q ss_pred CCCCCCHHHHHHHHhcC--CCcEEEEEEeChh
Q psy9828 2 DMKGITREEAVLFLLSL--QDQIHLIVQNRRD 31 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~--~~~VtL~vq~~~~ 31 (311)
++++++++||+..|+.. +..|+|+|+....
T Consensus 63 ~v~~~~h~evv~~lk~~~~G~~v~L~V~R~g~ 94 (113)
T 3soe_A 63 NVQNLTHLQVVEVLKQFPVGADVPLLILRGGP 94 (113)
T ss_dssp ECTTSCHHHHHHHHHHSCTTCEEEEEEEESSC
T ss_pred ECCCCCHHHHHHHHHcCCCCCEEEEEEEECCc
Confidence 57899999999999986 4689999995543
No 237
>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A*
Probab=44.88 E-value=67 Score=25.47 Aligned_cols=69 Identities=10% Similarity=0.080 Sum_probs=38.6
Q ss_pred HHHHHHHhcCCEEEEecCc-cc---cccccc--cCccc-EEEEEcCCCHHHH-HHHHccCCccc----------C-CCcc
Q psy9828 93 SAIRDMMDRGRHGLLDITP-NA---VDRLNY--AQFYP-IVIFLRAETKSNV-KELRAGIPKLN----------S-AQFF 153 (311)
Q Consensus 93 ~AVr~ViekGKhCILDV~p-qa---VkrL~~--a~l~P-IVIFIkPpS~e~L-KeLR~~l~e~~----------~-~hlF 153 (311)
..+++.++.|+.+|+|... +. .+.++. .. .+ ++||+.++ .+.+ +.++.+..+.. + ..-+
T Consensus 77 ~~~~~~~~~g~~vi~~~~~~~~~~~~~~~~~~~~~-~~~~~v~l~~~-~e~l~~R~~~r~~~~~~~~~~~~~~~~~~~~~ 154 (178)
T 1qhx_A 77 EGVVAMARAGARIIIDDVFLGGAAAQERWRSFVGD-LDVLWVGVRCD-GAVAEGRETARGDRVAGMAAKQAYVVHEGVEY 154 (178)
T ss_dssp HHHHHHHHTTCEEEEEECCTTTHHHHHHHHHHHTT-CCEEEEEEECC-HHHHHHHHHHTSSSCTTHHHHHTTGGGTTCCC
T ss_pred HHHHHHHhcCCeEEEEeccccChHHHHHHHHHhcC-CcEEEEEEECC-HHHHHHHHHhhCCcccchhhhhchhhccCCCC
Confidence 4567778889999999854 11 112211 12 24 57888874 5555 55655543210 1 1237
Q ss_pred eEEEecCCcc
Q psy9828 154 SVVIFLRAET 163 (311)
Q Consensus 154 d~vI~nddl~ 163 (311)
|.+|.++..+
T Consensus 155 d~~idt~~~~ 164 (178)
T 1qhx_A 155 DVEVDTTHKE 164 (178)
T ss_dssp SEEEETTSSC
T ss_pred cEEEECCCCC
Confidence 7888766554
No 238
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A
Probab=43.44 E-value=22 Score=27.63 Aligned_cols=82 Identities=6% Similarity=-0.031 Sum_probs=46.3
Q ss_pred HHHHHH--hcCCEEEEecC--cccccccccc-CcccEEEEEcCCCHHHHHHHHccCCc----c-----------------
Q psy9828 94 AIRDMM--DRGRHGLLDIT--PNAVDRLNYA-QFYPIVIFLRAETKSNVKELRAGIPK----L----------------- 147 (311)
Q Consensus 94 AVr~Vi--ekGKhCILDV~--pqaVkrL~~a-~l~PIVIFIkPpS~e~LKeLR~~l~e----~----------------- 147 (311)
.+.+.+ ..++.+|+|=- +.-++.|+.. .-...+||+..|....++.+..+... .
T Consensus 68 ~~~~~l~~~~~~~vi~dg~~~~~~~~~l~~~~~~~~~~i~l~~~~~~~~~R~~~R~~~~~~~~~~~~~~r~~~~~~~~~~ 147 (179)
T 3lw7_A 68 LCVEELGTSNHDLVVFDGVRSLAEVEEFKRLLGDSVYIVAVHSPPKIRYKRMIERLRSDDSKEISELIRRDREELKLGIG 147 (179)
T ss_dssp HHHHHHCSCCCSCEEEECCCCHHHHHHHHHHHCSCEEEEEEECCHHHHHHHHHTCC----CCCHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHhcCCCeEEEeCCCCHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhccCCCCcchHHHHHHHHHhhhccChH
Confidence 344444 56888999842 1112223221 11236899988765555666555321 0
Q ss_pred cCCCcceEEEecCC-ccchhhhhhccccHHHHHHHHHHHh
Q psy9828 148 NSAQFFSVVIFLRA-ETKSNVKELRAGIPNYIKTISLINF 186 (311)
Q Consensus 148 ~~~hlFd~vI~ndd-l~~~~~~~~~~~~~~y~~Lk~~I~~ 186 (311)
.|..+.|.+|.|+. .++ ++.++++++.+
T Consensus 148 ~~~~~ad~vId~~~~~~~-----------~~~~i~~~l~~ 176 (179)
T 3lw7_A 148 EVIAMADYIITNDSNYEE-----------FKRRCEEVTDR 176 (179)
T ss_dssp HHHHTCSEEEECCSCHHH-----------HHHHHHHHHHH
T ss_pred hHHHhCCEEEECCCCHHH-----------HHHHHHHHHHH
Confidence 02345678888773 333 78888888764
No 239
>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A*
Probab=43.41 E-value=1e+02 Score=24.46 Aligned_cols=48 Identities=17% Similarity=0.132 Sum_probs=27.6
Q ss_pred HHHHhcCCEEEEecCc---cccccccccCcccEEEEEcCCCHHHHHHHHcc
Q psy9828 96 RDMMDRGRHGLLDITP---NAVDRLNYAQFYPIVIFLRAETKSNVKELRAG 143 (311)
Q Consensus 96 r~ViekGKhCILDV~p---qaVkrL~~a~l~PIVIFIkPpS~e~LKeLR~~ 143 (311)
...++.|+.+|+|... ...+.|+.......+||+..|-...++.+..|
T Consensus 74 ~~~~~~~~~~vi~~~~~~~~~~~~l~~~~~~~~vv~l~~~~e~~~~R~~~R 124 (175)
T 1knq_A 74 FAMQRTNKVSLIVCSALKKHYRDLLREGNPNLSFIYLKGDFDVIESRLKAR 124 (175)
T ss_dssp HHHHHHCSEEEEECCCCSHHHHHHHHTTCTTEEEEEEECCHHHHHHHHHTS
T ss_pred HHHHhcCCcEEEEeCchHHHHHHHHHhcCCCEEEEEEECCHHHHHHHHHhc
Confidence 3344568999999753 12233332221227899998655555666554
No 240
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=43.16 E-value=25 Score=26.43 Aligned_cols=30 Identities=20% Similarity=0.333 Sum_probs=25.6
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeChh
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNRRD 31 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~~~ 31 (311)
++.+++.++++..|....+.|+|.++.+.+
T Consensus 70 ~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~ 99 (105)
T 1wha_A 70 DVTEARHDHAVSLLTAASPTIALLLEREAG 99 (105)
T ss_dssp BCTTCCHHHHHHHHTSCCSCEEEEEEECCC
T ss_pred ECCCCCHHHHHHHHHcCCCeEEEEEEECCC
Confidence 567889999999999888999999987654
No 241
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=41.27 E-value=25 Score=27.52 Aligned_cols=30 Identities=20% Similarity=0.356 Sum_probs=25.9
Q ss_pred CCC-CCCHHHHHHHHhcCCCcEEEEEEeChh
Q psy9828 2 DMK-GITREEAVLFLLSLQDQIHLIVQNRRD 31 (311)
Q Consensus 2 dlr-~~T~EEA~~~L~~~~~~VtL~vq~~~~ 31 (311)
++. ++++++++.+|...++.|+|.|+.++.
T Consensus 86 ~v~~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 116 (128)
T 2db5_A 86 PLDQNISHQQAIALLQQTTGSLRLIVAREPV 116 (128)
T ss_dssp BCSTTSCHHHHHHHHHHCCSEEEEEEEECCC
T ss_pred ECCCCCCHHHHHHHHHcCCCeEEEEEEcCCC
Confidence 465 899999999999988999999987654
No 242
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}
Probab=40.87 E-value=13 Score=33.92 Aligned_cols=29 Identities=21% Similarity=0.379 Sum_probs=25.5
Q ss_pred CeeEEEeccccCCCCCCCcceeeCCeeEeccc
Q psy9828 43 DSFHIKTHFNYDQPEKGEMSFRKGDVFHVIEL 74 (311)
Q Consensus 43 DSFYVRA~FDy~~~~~~~LsFkkGDILhViDT 74 (311)
....|+|.|||.+. +++|++||++.+.|.
T Consensus 197 ~~~~v~al~dy~~~---e~~~~kge~~~l~~~ 225 (283)
T 3pe0_A 197 GRLPLLAVCDYKQV---EVTVHKGDECQLVGP 225 (283)
T ss_dssp SCEEEEECSCEECS---SCEECTTCEEEEEEE
T ss_pred CCceEEeecCccCC---cccccCCCEEEEeeC
Confidence 45899999999764 799999999999885
No 243
>3t61_A Gluconokinase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium, nysgrc; 2.20A {Sinorhizobium meliloti}
Probab=40.66 E-value=75 Score=26.01 Aligned_cols=53 Identities=13% Similarity=0.135 Sum_probs=31.8
Q ss_pred chHHHHHHHhcCCEEEEecCc---cccccccccC-cccEEEEEcCCCHHHHHHHHcc
Q psy9828 91 RLSAIRDMMDRGRHGLLDITP---NAVDRLNYAQ-FYPIVIFLRAETKSNVKELRAG 143 (311)
Q Consensus 91 Sl~AVr~ViekGKhCILDV~p---qaVkrL~~a~-l~PIVIFIkPpS~e~LKeLR~~ 143 (311)
.+..+.+.+..|+.+|+|... ...+.|.... ..-.+||+..|-...++.++.|
T Consensus 75 ~~~~l~~~~~~~~~vivd~~~~~~~~~~~l~~~~~~~~~vi~l~~~~e~~~~Rl~~R 131 (202)
T 3t61_A 75 WLAAIGERLASREPVVVSCSALKRSYRDKLRESAPGGLAFVFLHGSESVLAERMHHR 131 (202)
T ss_dssp HHHHHHHHHTSSSCCEEECCCCSHHHHHHHHHTSTTCCEEEEEECCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHhcCCCeEEEEEeCCHHHHHHHHHHh
Confidence 355667777889999999654 2233333221 1136889988655455555444
No 244
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=39.19 E-value=48 Score=26.79 Aligned_cols=74 Identities=8% Similarity=0.028 Sum_probs=41.8
Q ss_pred CCEEEEecCccccccccccCcccEEEEEcCCCHHHHHHHHcc--CCccc--------C-----CCcceEEEecCCccchh
Q psy9828 102 GRHGLLDITPNAVDRLNYAQFYPIVIFLRAETKSNVKELRAG--IPKLN--------S-----AQFFSVVIFLRAETKSN 166 (311)
Q Consensus 102 GKhCILDV~pqaVkrL~~a~l~PIVIFIkPpS~e~LKeLR~~--l~e~~--------~-----~hlFd~vI~nddl~~~~ 166 (311)
|+.+|+|... -.+ -......-.+|||..+....++.+..| +.++. + ....|.+|.++. +
T Consensus 106 ~~~vi~d~~~-l~~-~~~~~~~d~~i~l~~~~e~~~~R~~~R~~~~~~~~~~~i~~~~~~~~~~~~ad~vId~~~-~--- 179 (203)
T 1uf9_A 106 APLVFLEIPL-LFE-KGWEGRLHGTLLVAAPLEERVRRVMARSGLSREEVLARERAQMPEEEKRKRATWVLENTG-S--- 179 (203)
T ss_dssp CSEEEEECTT-TTT-TTCGGGSSEEEEECCCHHHHHHHHHTTTCCTTHHHHHHHTTSCCHHHHHHHCSEEECCSS-H---
T ss_pred CCEEEEEecc-eec-cCchhhCCEEEEEECCHHHHHHHHHHcCCCCHHHHHHHHHHCCChhHHHHhCCEEEECCC-C---
Confidence 5788888531 111 011123458999999766666666555 33211 1 234566776653 2
Q ss_pred hhhhccccHHHHHHHHHHHhc
Q psy9828 167 VKELRAGIPNYIKTISLINFN 187 (311)
Q Consensus 167 ~~~~~~~~~~y~~Lk~~I~~e 187 (311)
.++ ++.++++++...
T Consensus 180 ~~~------~~~~i~~~~~~~ 194 (203)
T 1uf9_A 180 LED------LERALKAVLAEL 194 (203)
T ss_dssp HHH------HHHHHHHHHHSC
T ss_pred HHH------HHHHHHHHHHHH
Confidence 233 788888888754
No 245
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=38.74 E-value=22 Score=26.13 Aligned_cols=29 Identities=17% Similarity=0.164 Sum_probs=24.4
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeCh
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNRR 30 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~~ 30 (311)
++.++++++++..|....+.|+|++....
T Consensus 60 ~v~~~~~~~~~~~l~~~~~~v~l~v~~~~ 88 (93)
T 3o46_A 60 PVEDKRPEEIIQILAQSQGAITFKIIPGS 88 (93)
T ss_dssp ESTTSCHHHHHHHHHHCCEEEEEEEECC-
T ss_pred ECCCCCHHHHHHHHHhCCCeEEEEEEeCC
Confidence 46788999999999999999999998544
No 246
>4eun_A Thermoresistant glucokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Janibacter SP}
Probab=37.88 E-value=97 Score=25.47 Aligned_cols=79 Identities=10% Similarity=0.061 Sum_probs=43.0
Q ss_pred HHhcCCEEEEecCcccc---ccccccCcccEEEEEcCCCHHHHHHHHccCCcc---------------cCCCcceEEEec
Q psy9828 98 MMDRGRHGLLDITPNAV---DRLNYAQFYPIVIFLRAETKSNVKELRAGIPKL---------------NSAQFFSVVIFL 159 (311)
Q Consensus 98 ViekGKhCILDV~pqaV---krL~~a~l~PIVIFIkPpS~e~LKeLR~~l~e~---------------~~~hlFd~vI~n 159 (311)
.+..|+.+|+|.....- +.+....-.-.+||+..|....++.++.|-.+. -|....+.+|.+
T Consensus 97 ~~~~g~~viid~~~~~~~~~~~l~~~~~~~~vv~l~~~~e~l~~Rl~~R~~~~~~~~~l~~~~~~~~~~~~~~~~~~Id~ 176 (200)
T 4eun_A 97 RADAGVSTIITCSALKRTYRDVLREGPPSVDFLHLDGPAEVIKGRMSKREGHFMPASLLQSQLATLEALEPDESGIVLDL 176 (200)
T ss_dssp HHHTTCCEEEEECCCCHHHHHHHTTSSSCCEEEEEECCHHHHHHHHTTCSCCSSCGGGHHHHHHHCCCCCTTSCEEEEET
T ss_pred HHhcCCCEEEEchhhhHHHHHHHHHhCCceEEEEEeCCHHHHHHHHHhcccCCCCHHHHHHHHHHhCCCCCCCCeEEEEC
Confidence 34568889999754321 122211112367899986444446665553211 133445677776
Q ss_pred CCccchhhhhhccccHHHHHHHHHHHh
Q psy9828 160 RAETKSNVKELRAGIPNYIKTISLINF 186 (311)
Q Consensus 160 ddl~~~~~~~~~~~~~~y~~Lk~~I~~ 186 (311)
+. + .++ +..++.+.|..
T Consensus 177 ~~-~---~~e------~~~~I~~~l~~ 193 (200)
T 4eun_A 177 RQ-P---PEQ------LIERALTWLDI 193 (200)
T ss_dssp TS-C---HHH------HHHHHHHHHCC
T ss_pred CC-C---HHH------HHHHHHHHHHh
Confidence 42 2 233 77888777753
No 247
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), S genomics; HET: ACO UNL; 1.70A {Mus musculus}
Probab=37.79 E-value=58 Score=29.01 Aligned_cols=72 Identities=8% Similarity=-0.027 Sum_probs=41.3
Q ss_pred CCEEEEecCccccccccccCcccEEEEEcCCCHHHHHHHHcc--CCcc--------c-----CCCcceEEEecC-Cccch
Q psy9828 102 GRHGLLDITPNAVDRLNYAQFYPIVIFLRAETKSNVKELRAG--IPKL--------N-----SAQFFSVVIFLR-AETKS 165 (311)
Q Consensus 102 GKhCILDV~pqaVkrL~~a~l~PIVIFIkPpS~e~LKeLR~~--l~e~--------~-----~~hlFd~vI~nd-dl~~~ 165 (311)
.+.||+|...-.-..+ ..+...+|||..|....++.+..| .+.+ . +....|.+|.|+ +.++
T Consensus 181 ~~~vIveg~~l~~~~~--~~~~d~vI~l~a~~ev~~~Rl~~R~g~s~e~~~~ri~~q~~~~~~~~~AD~vIdn~~s~ee- 257 (281)
T 2f6r_A 181 KTLCVIDAAMLLEAGW--QSMVHEVWTVVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSNVVLSTLWESHV- 257 (281)
T ss_dssp CCEEEEECTTTTTTTG--GGGCSEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHTSCCHHHHHHTCSEEEECSSCHHH-
T ss_pred CCEEEEEechhhccch--HHhCCEEEEEcCCHHHHHHHHHHcCCCCHHHHHHHHHHcCChHhhHhhCCEEEECCCCHHH-
Confidence 3689999753211111 134568999999876666655433 2211 1 123467788776 3333
Q ss_pred hhhhhccccHHHHHHHHHHHh
Q psy9828 166 NVKELRAGIPNYIKTISLINF 186 (311)
Q Consensus 166 ~~~~~~~~~~~y~~Lk~~I~~ 186 (311)
++.+++.++.+
T Consensus 258 ----------l~~~I~~~l~~ 268 (281)
T 2f6r_A 258 ----------TQSQVEKAWNL 268 (281)
T ss_dssp ----------HHHHHHHHHHH
T ss_pred ----------HHHHHHHHHHH
Confidence 67777777654
No 248
>2grj_A Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosphocoenzyme kinase, structural genomics, joint center for structural GE JCSG; HET: ADP COD; 2.60A {Thermotoga maritima}
Probab=36.43 E-value=58 Score=27.63 Aligned_cols=73 Identities=11% Similarity=-0.024 Sum_probs=43.5
Q ss_pred CCEEEEecCccccccccccCcccEEEEEcCCCHHHHHHH-HccCCc--ccCCCcceEEEecCC-ccchhhhhhccccHHH
Q psy9828 102 GRHGLLDITPNAVDRLNYAQFYPIVIFLRAETKSNVKEL-RAGIPK--LNSAQFFSVVIFLRA-ETKSNVKELRAGIPNY 177 (311)
Q Consensus 102 GKhCILDV~pqaVkrL~~a~l~PIVIFIkPpS~e~LKeL-R~~l~e--~~~~hlFd~vI~ndd-l~~~~~~~~~~~~~~y 177 (311)
+..+|+|+.. -.+. ....+.-.+|||..|...+++++ ...+.. +.+..+-|.+|.|+. +++ +.
T Consensus 111 ~~~vv~d~pl-l~e~-~~~~~~d~vi~v~a~~e~r~~Rli~~q~~~~~~~~~~~AD~vI~n~~~~~~-----------l~ 177 (192)
T 2grj_A 111 SGLIVIEAAL-LKRM-GLDQLCDHVITVVASRETILKRNREADRRLKFQEDIVPQGIVVANNSTLED-----------LE 177 (192)
T ss_dssp CEEEEEECTT-TTTT-TGGGGCSEEEEEECCHHHHHHHCSSHHHHHTTCTTCCCCSEEEECSSCHHH-----------HH
T ss_pred CCEEEEEEec-eeec-ChHHhCCEEEEEECCHHHHHHHHHHhcCCchhhhHHhcCCEEEECCCCHHH-----------HH
Confidence 6789999642 1111 11234668899999876666553 111112 233456678888773 333 78
Q ss_pred HHHHHHHHhc
Q psy9828 178 IKTISLINFN 187 (311)
Q Consensus 178 ~~Lk~~I~~e 187 (311)
.++++++.+.
T Consensus 178 ~~v~~~~~~l 187 (192)
T 2grj_A 178 KKVEEVMKLV 187 (192)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888877765
No 249
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=35.10 E-value=31 Score=26.06 Aligned_cols=30 Identities=23% Similarity=0.304 Sum_probs=25.3
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeChh
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNRRD 31 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~~~ 31 (311)
++.++++++++..|+...+.|+|.+..+..
T Consensus 73 ~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~ 102 (107)
T 1uhp_A 73 DLSRATHDQAVEAFKTAKEPIVVQVLRRTS 102 (107)
T ss_dssp ECTTCCHHHHHHHHHHCCSSEEEEEEECCS
T ss_pred ECCCCCHHHHHHHHHcCCCcEEEEEEeCCC
Confidence 467889999999999989999999986543
No 250
>2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus}
Probab=34.73 E-value=31 Score=27.71 Aligned_cols=47 Identities=13% Similarity=0.175 Sum_probs=27.8
Q ss_pred HHHHHHhcCCEEEEecCccc------cccccccCccc-EEEEEcCCCHHHHHHH
Q psy9828 94 AIRDMMDRGRHGLLDITPNA------VDRLNYAQFYP-IVIFLRAETKSNVKEL 140 (311)
Q Consensus 94 AVr~ViekGKhCILDV~pqa------VkrL~~a~l~P-IVIFIkPpS~e~LKeL 140 (311)
.++.+++.|+.+|+|-.... +..|......| .+||+..|....++.+
T Consensus 69 ~~~~~l~~g~~vi~d~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~~~e~~~~R~ 122 (193)
T 2rhm_A 69 TAATILQSGQSLIMESNFRVDLDTERMQNLHTIAPFTPIQIRCVASGDVLVERI 122 (193)
T ss_dssp HHHHHHHTTCCEEEEECCCHHHHHHHHHHHHHHSCCEEEEEEEECCHHHHHHHH
T ss_pred HHHHHHhCCCeEEEecCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHH
Confidence 45667778999999977632 11133333344 6788887544334444
No 251
>4i1u_A Dephospho-COA kinase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.05A {Burkholderia vietnamiensis} PDB: 4i1v_A*
Probab=34.65 E-value=32 Score=30.28 Aligned_cols=73 Identities=10% Similarity=0.055 Sum_probs=46.4
Q ss_pred CCEEEEecCccccccccccCcccEEEEEcCCCHHHHHHHHcc--CCccc-------------CCCcceEEEecC--Cccc
Q psy9828 102 GRHGLLDITPNAVDRLNYAQFYPIVIFLRAETKSNVKELRAG--IPKLN-------------SAQFFSVVIFLR--AETK 164 (311)
Q Consensus 102 GKhCILDV~pqaVkrL~~a~l~PIVIFIkPpS~e~LKeLR~~--l~e~~-------------~~hlFd~vI~nd--dl~~ 164 (311)
+..||+|+-. -.+.-....++-.+|+|..|...+++++.+| +++++ +...-|.||.|+ ++++
T Consensus 112 ~~~vv~d~pL-L~E~~~~~~~~D~vi~V~ap~e~r~~Rl~~Rdg~s~eea~~ri~~Q~~~eek~~~AD~VIdN~~gsle~ 190 (210)
T 4i1u_A 112 GPYVIFVVPL-LVESRNWKARCDRVLVVDCPVDTQIARVMQRNGFTREQVEAIIARQATREARLAAADDVIVNDAATPDA 190 (210)
T ss_dssp SSSEEEECTT-CTTCHHHHHHCSEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHSCCHHHHHHTCSEEEECSSCCHHH
T ss_pred CCEEEEEEec-ccccCCccccCCeEEEEECCHHHHHHHHHhcCCCCHHHHHHHHHHcCChHHHHHhCCEEEECCCCCHHH
Confidence 5689999843 2331112235667899999887788776554 44321 234557889887 5665
Q ss_pred hhhhhhccccHHHHHHHHHHHh
Q psy9828 165 SNVKELRAGIPNYIKTISLINF 186 (311)
Q Consensus 165 ~~~~~~~~~~~~y~~Lk~~I~~ 186 (311)
+..++..++.+
T Consensus 191 -----------l~~qV~~l~~~ 201 (210)
T 4i1u_A 191 -----------LAVQVDALHQR 201 (210)
T ss_dssp -----------HHHHHHHHHHH
T ss_pred -----------HHHHHHHHHHH
Confidence 77888777664
No 252
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=34.49 E-value=73 Score=23.94 Aligned_cols=32 Identities=16% Similarity=0.172 Sum_probs=26.7
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeChhHH
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNRRDEY 33 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~~~~Y 33 (311)
++.+++.++++..+....+.|+|.+..+...+
T Consensus 68 ~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~~~ 99 (110)
T 1um1_A 68 SLLGLGYLRAVDLIRHGGKKMRFLVAKSDVET 99 (110)
T ss_dssp BCSSCCHHHHHHHHHTCCSEEEEEEECCCHHH
T ss_pred ECCCCCHHHHHHHHHcCCCeEEEEEEeCCcce
Confidence 46778999999999998899999999665543
No 253
>2d9i_A NEDD4-binding protein 2; SMR domain, N4BP2, BCL-3 binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.68.8.1
Probab=33.43 E-value=14 Score=28.32 Aligned_cols=15 Identities=33% Similarity=0.658 Sum_probs=13.3
Q ss_pred CCCCCCCHHHHHHHH
Q psy9828 1 MDMKGITREEAVLFL 15 (311)
Q Consensus 1 vdlr~~T~EEA~~~L 15 (311)
+||.|+|.+||..+|
T Consensus 11 lDLHGl~v~eA~~~L 25 (96)
T 2d9i_A 11 LDLHGLHVDEALEHL 25 (96)
T ss_dssp EECTTSCHHHHHHHH
T ss_pred EECCCCCHHHHHHHH
Confidence 589999999999766
No 254
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=33.20 E-value=67 Score=25.33 Aligned_cols=93 Identities=18% Similarity=0.253 Sum_probs=60.1
Q ss_pred CCeeEeccc-ccc----cccccccCCCCc----cchHHHHHHHhcCCEEEEecCccccccccccCcccEEEEEcCCCHHH
Q psy9828 66 GDVFHVIEL-ENM----MEESDSKKCSGI----IRLSAIRDMMDRGRHGLLDITPNAVDRLNYAQFYPIVIFLRAETKSN 136 (311)
Q Consensus 66 GDILhViDT-~~m----mE~~~~~~~~nl----TSl~AVr~ViekGKhCILDV~pqaVkrL~~a~l~PIVIFIkPpS~e~ 136 (311)
|-+|-|+.| .++ -|+....|.|.. ||-+.||++++.-| -.-+|.|+|+.--|...
T Consensus 2 gkvllvistdtniissvqerakhnypgryirtatssqdirdiiksmk----------------dngkplvvfvngasqnd 65 (112)
T 2lnd_A 2 GKVLLVISTDTNIISSVQERAKHNYPGRYIRTATSSQDIRDIIKSMK----------------DNGKPLVVFVNGASQND 65 (112)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHHHSCTTTEEEECSHHHHHHHHHHHT----------------TCCSCEEEEECSCCHHH
T ss_pred CcEEEEEecCchHHHHHHHHhhcCCCCceeeeccchhhHHHHHHHHH----------------hcCCeEEEEecCccccc
Confidence 668888888 443 344444566664 88889999886422 23479999999999888
Q ss_pred HHHHHccCCcccCCCcceEEEecCCccchhhhhhccccHHHHHHHHHHHhcC
Q psy9828 137 VKELRAGIPKLNSAQFFSVVIFLRAETKSNVKELRAGIPNYIKTISLINFNG 188 (311)
Q Consensus 137 LKeLR~~l~e~~~~hlFd~vI~nddl~~~~~~~~~~~~~~y~~Lk~~I~~eQ 188 (311)
+.|......+ .++-..++...|-++ +-..+++++....
T Consensus 66 vnefqneakk---egvsydvlkstdpee-----------ltqrvreflktag 103 (112)
T 2lnd_A 66 VNEFQNEAKK---EGVSYDVLKSTDPEE-----------LTQRVREFLKTAG 103 (112)
T ss_dssp HHHHHHHHHH---HTCEEEEEECCCHHH-----------HHHHHHHHHHHTT
T ss_pred HHHHHHHHHh---cCcchhhhccCCHHH-----------HHHHHHHHHHhcc
Confidence 7665432222 233344555555555 6778888776543
No 255
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.51 E-value=27 Score=25.45 Aligned_cols=30 Identities=27% Similarity=0.419 Sum_probs=23.9
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeChh
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNRRD 31 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~~~ 31 (311)
++.+++.++++..|....+.|+|.+..+++
T Consensus 62 ~v~~~~~~~~~~~~~~~~~~v~l~v~r~~~ 91 (93)
T 2dkr_A 62 SVEGEQHEKAVELLKAAQGSVKLVVRSGPS 91 (93)
T ss_dssp ECTTSCHHHHHHHHHHCCSEEEEEECCCCS
T ss_pred ECCCCCHHHHHHHHHhCCCcEEEEEEeCCC
Confidence 356778999999998888889998876553
No 256
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=32.17 E-value=24 Score=32.24 Aligned_cols=31 Identities=26% Similarity=0.303 Sum_probs=27.4
Q ss_pred CCCCCCCHHHHHHHHhcCCCcEEEEEEeChh
Q psy9828 1 MDMKGITREEAVLFLLSLQDQIHLIVQNRRD 31 (311)
Q Consensus 1 vdlr~~T~EEA~~~L~~~~~~VtL~vq~~~~ 31 (311)
+++.++|++||+.+|+..++.|+|.|+...+
T Consensus 134 ~~v~~~t~~e~v~~l~~~g~~V~L~V~R~~~ 164 (263)
T 1z87_A 134 EDLSSATHDEAVQALKKTGKEVVLEVKYMKE 164 (263)
T ss_dssp CBCTTSCHHHHHHHHHHCCSCCCEEEECCSS
T ss_pred EECCCcCHHHHHHHHhcCCCeEEEEEEeCcc
Confidence 3688999999999999999999999997655
No 257
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=31.89 E-value=31 Score=25.94 Aligned_cols=30 Identities=17% Similarity=0.304 Sum_probs=25.1
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeChh
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNRRD 31 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~~~ 31 (311)
++.+++.++++..|....+.|+|.+..+.+
T Consensus 70 ~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~ 99 (106)
T 3axa_A 70 SLVGLSQERAAELMTRTSSVVTLEVAKQGA 99 (106)
T ss_dssp ECTTCCHHHHHHHHHTCCSEEEEEEECCCS
T ss_pred ECCCCCHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 467789999999999988999999985544
No 258
>2c95_A Adenylate kinase 1; transferase, AP4A, nucleotide kinase, transferase ATP-bindi; HET: B4P; 1.71A {Homo sapiens} PDB: 1z83_A* 3adk_A
Probab=31.84 E-value=41 Score=27.04 Aligned_cols=50 Identities=14% Similarity=0.169 Sum_probs=29.9
Q ss_pred HHHHHHhcCCEEEEecCccccccccc----cCcccEEEEEcCCCHHHHHHHHcc
Q psy9828 94 AIRDMMDRGRHGLLDITPNAVDRLNY----AQFYPIVIFLRAETKSNVKELRAG 143 (311)
Q Consensus 94 AVr~ViekGKhCILDV~pqaVkrL~~----a~l~PIVIFIkPpS~e~LKeLR~~ 143 (311)
.|+..+++|+.+|+|-.+...+.+.. ....-.+||+..|....++.+..+
T Consensus 80 ~i~~~~~~~~~vi~d~~~~~~~~~~~~~~~~~~~~~vi~l~~~~e~~~~R~~~R 133 (196)
T 2c95_A 80 AMVAKVNTSKGFLIDGYPREVQQGEEFERRIGQPTLLLYVDAGPETMTQRLLKR 133 (196)
T ss_dssp HHHHHTTTCSCEEEESCCCSHHHHHHHHHHTCCCSEEEEEECCHHHHHHHHHHH
T ss_pred HHHhccccCCcEEEeCCCCCHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHcc
Confidence 34444557999999976655544321 111237899998655555555443
No 259
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=31.05 E-value=8.8 Score=29.69 Aligned_cols=35 Identities=17% Similarity=0.226 Sum_probs=27.5
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeChhHHHHH
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNRRDEYEHV 36 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~~~~Y~~i 36 (311)
++++++..+++..+...++.|+|.++.+.+.|..+
T Consensus 73 ~v~~~~~~~~~~~~~~~g~~v~l~v~r~~~~~~~~ 107 (117)
T 1uit_A 73 NLRSATEQQARLIIGQQCDTITILAQYNPHVHQLS 107 (117)
T ss_dssp ETTTCCHHHHHHHTTSCCSEEEEEECCCSCCCCCC
T ss_pred ECCCCCHHHHHHHHHcCCCeEEEEEEECCchhhhh
Confidence 46778888888878888899999999877766544
No 260
>3fau_A NEDD4-binding protein 2; SMR, small-MUTS related domain, nicking endonuclease, alternative splicing, ATP-binding, coiled coil, cytoplasm, hydrolase; 1.90A {Homo sapiens} SCOP: d.68.8.1
Probab=30.85 E-value=16 Score=27.08 Aligned_cols=15 Identities=33% Similarity=0.658 Sum_probs=13.2
Q ss_pred CCCCCCCHHHHHHHH
Q psy9828 1 MDMKGITREEAVLFL 15 (311)
Q Consensus 1 vdlr~~T~EEA~~~L 15 (311)
+||.|+|.+||..+|
T Consensus 3 lDLHGl~v~eA~~~l 17 (82)
T 3fau_A 3 LDLHGLHVDEALEHL 17 (82)
T ss_dssp EECTTSCHHHHHHHH
T ss_pred EECCCCcHHHHHHHH
Confidence 589999999999865
No 261
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=30.49 E-value=48 Score=25.15 Aligned_cols=29 Identities=31% Similarity=0.314 Sum_probs=24.7
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeCh
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNRR 30 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~~ 30 (311)
++.+++.++++..|...++.|+|.+..+.
T Consensus 64 ~v~~~~~~~~~~~l~~~~~~v~l~v~R~~ 92 (106)
T 4amh_A 64 ALEEVTHEEAVTALKNTSDFVYLKVAKPG 92 (106)
T ss_dssp ECSSCCHHHHHHHHHSCCSEEEEEEECCS
T ss_pred ECCCCCHHHHHHHHhCCCCeEEEEEEeCC
Confidence 46788999999999999999999998543
No 262
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=30.32 E-value=42 Score=25.78 Aligned_cols=29 Identities=21% Similarity=0.185 Sum_probs=24.9
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeCh
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNRR 30 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~~ 30 (311)
++.++++++++..|....+.|+|.++.+.
T Consensus 76 ~v~~~~~~~~~~~l~~~~~~v~l~v~R~~ 104 (117)
T 2csj_A 76 PMEDVLHSFAVQQLRKSGKIAAIVVKRPR 104 (117)
T ss_dssp BCBTCCHHHHHHHHHHSCSEEEEEEEEEE
T ss_pred ECCCcCHHHHHHHHhcCCCeEEEEEEECC
Confidence 57788999999999998899999998544
No 263
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=29.98 E-value=41 Score=25.42 Aligned_cols=30 Identities=17% Similarity=0.386 Sum_probs=24.7
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeChh
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNRRD 31 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~~~ 31 (311)
++.+++.++++..|...++.|+|.++.+..
T Consensus 70 ~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~ 99 (111)
T 2dlu_A 70 NVQGMTSEQVAQVLRNCGNSVRMLVARDPA 99 (111)
T ss_dssp CCTTSCHHHHHHHHHHHCSEEEEEEEESCT
T ss_pred ECCCCCHHHHHHHHHhCCCeEEEEEEeCCC
Confidence 567788999999998878899999986554
No 264
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=29.33 E-value=30 Score=26.46 Aligned_cols=29 Identities=21% Similarity=0.367 Sum_probs=23.6
Q ss_pred CCCCCCHHHHHHHHhcC---CCcEEEEEEeCh
Q psy9828 2 DMKGITREEAVLFLLSL---QDQIHLIVQNRR 30 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~---~~~VtL~vq~~~ 30 (311)
++.+++++||+..|+.. .+.|+|.+..+.
T Consensus 65 ~v~~~~~~~~~~~l~~~~~~~~~v~l~v~R~~ 96 (108)
T 3cbz_A 65 NFENMSNDDAVRVLRDIVHKPGPIVLTVAKSG 96 (108)
T ss_dssp ETTSCCHHHHHHHHHHHHTSSSCEEEEEECCC
T ss_pred ECCCCCHHHHHHHHHhcccCCCeEEEEEEeCC
Confidence 47788999999999877 568999998543
No 265
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=28.86 E-value=61 Score=23.39 Aligned_cols=27 Identities=30% Similarity=0.326 Sum_probs=23.2
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEe
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQN 28 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~ 28 (311)
++.+++.++++..+....+.++|.++.
T Consensus 62 ~v~~~~~~~~~~~~~~~~~~v~l~v~r 88 (90)
T 1qav_A 62 DLSSATHDEAVQALKKTGKEVVLEVKY 88 (90)
T ss_dssp ECTTCCHHHHHHHHHTCCSEEEEEEEE
T ss_pred ECCCCCHHHHHHHHHhCCCeEEEEEEE
Confidence 467789999999999988999998874
No 266
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=28.75 E-value=37 Score=26.27 Aligned_cols=29 Identities=21% Similarity=0.241 Sum_probs=24.4
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeCh
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNRR 30 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~~ 30 (311)
++.++|++|++.+|...++.|+|.+..+.
T Consensus 74 ~v~~~~~~~~~~~l~~~g~~v~l~v~r~~ 102 (117)
T 1v62_A 74 SMEHCSLLEATKLLASISEKVRLEILPVP 102 (117)
T ss_dssp ETTSCCHHHHHHHHHSCSSEEEEEECCBT
T ss_pred ECCCCCHHHHHHHHHhCCCeEEEEEEECC
Confidence 46778999999999988899999988544
No 267
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.29 E-value=64 Score=23.89 Aligned_cols=29 Identities=21% Similarity=0.248 Sum_probs=24.9
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeCh
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNRR 30 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~~ 30 (311)
++.+++.++++..+....+.|+|.++.+.
T Consensus 61 ~v~~~~~~~~~~~~~~~g~~v~l~v~R~~ 89 (96)
T 2edv_A 61 PAEDLSWERAVDILREAEDSLSITVVRCT 89 (96)
T ss_dssp BSTTCCHHHHHHHHHHCSSCEEEEEEECC
T ss_pred ECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 56778999999999988899999998654
No 268
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=28.23 E-value=56 Score=23.86 Aligned_cols=28 Identities=25% Similarity=0.431 Sum_probs=23.2
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeC
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNR 29 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~ 29 (311)
++.+++.++++..|...++.|+|.++.+
T Consensus 65 ~v~~~~~~~~~~~l~~~g~~v~l~v~R~ 92 (96)
T 1d5g_A 65 SLEGATHKQAVETLRNTGQVVHLLLEKG 92 (96)
T ss_dssp ECTTCCHHHHHHHHHSCCSEEEEEEECC
T ss_pred ECCCCCHHHHHHHHHcCCCeEEEEEEcC
Confidence 4567899999999998888999988744
No 269
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=28.22 E-value=55 Score=23.28 Aligned_cols=28 Identities=14% Similarity=0.361 Sum_probs=22.7
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeC
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNR 29 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~ 29 (311)
++.+++++++...|....+.++|.+..+
T Consensus 54 ~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 81 (83)
T 2kv8_A 54 NVKKASHEDVVKLIGKCSGVLHMVIAEG 81 (83)
T ss_dssp ECSSCCHHHHHHHHTTCSSCEEEEEECC
T ss_pred ECCCCCHHHHHHHHHhCCCeEEEEEEcC
Confidence 4677888999999988888899988754
No 270
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=28.12 E-value=30 Score=25.42 Aligned_cols=27 Identities=15% Similarity=0.171 Sum_probs=22.5
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEe
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQN 28 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~ 28 (311)
++.+++++|++..|....++|+|.+..
T Consensus 57 ~v~~~~~~~~~~~l~~~~~~v~l~v~r 83 (88)
T 1kwa_A 57 SVANQTVEQLQKMLREMRGSITFKIVP 83 (88)
T ss_dssp EGGGSCHHHHHHHHHHCCEEEEEEEEC
T ss_pred ECCCCCHHHHHHHHhcCCCcEEEEEEC
Confidence 356789999999999888888888874
No 271
>2zqe_A MUTS2 protein; alpha/beta, ATP-binding, DNA-binding, nucleotide-binding, DN protein; 1.70A {Thermus thermophilus}
Probab=26.74 E-value=22 Score=26.92 Aligned_cols=29 Identities=24% Similarity=0.268 Sum_probs=19.7
Q ss_pred CCCCCCCHHHHHHHHhcC------CCcEEEEEEeC
Q psy9828 1 MDMKGITREEAVLFLLSL------QDQIHLIVQNR 29 (311)
Q Consensus 1 vdlr~~T~EEA~~~L~~~------~~~VtL~vq~~ 29 (311)
+||+|+|.|||...|..- .+.-++.+.+.
T Consensus 7 lDLhG~~~~eA~~~l~~fl~~a~~~g~~~v~IIHG 41 (83)
T 2zqe_A 7 VDLRGLTVAEALLEVDQALEEARALGLSTLRLLHG 41 (83)
T ss_dssp EECTTCCHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred EECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEC
Confidence 589999999999877432 23345555544
No 272
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=26.50 E-value=40 Score=26.16 Aligned_cols=29 Identities=28% Similarity=0.116 Sum_probs=23.4
Q ss_pred CCCCCCHHHHHHHHhcC----CCcEEEEEEeCh
Q psy9828 2 DMKGITREEAVLFLLSL----QDQIHLIVQNRR 30 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~----~~~VtL~vq~~~ 30 (311)
++.+++++||+..|... ++.|+|.+...+
T Consensus 75 ~v~~~~~~~~~~~l~~~~~~~g~~v~l~v~r~~ 107 (118)
T 1v6b_A 75 IVTDYTLAEAEAALQKAWNQGGDWIDLVVAVCP 107 (118)
T ss_dssp BCTTCBHHHHHHHHHHHHHHTCSEEEEEEECCC
T ss_pred ECCCCCHHHHHHHHHHhhhcCCCeEEEEEEeCC
Confidence 57788999999999765 678999888644
No 273
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=26.25 E-value=32 Score=26.20 Aligned_cols=27 Identities=22% Similarity=0.391 Sum_probs=22.0
Q ss_pred CCCCCCHHHHHHHHhc-----CCCcEEEEEEe
Q psy9828 2 DMKGITREEAVLFLLS-----LQDQIHLIVQN 28 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~-----~~~~VtL~vq~ 28 (311)
++.++|++||+..|.. ..+.++|++..
T Consensus 64 ~v~~~~~~~~~~~l~~~~~~~~~~~i~l~v~r 95 (103)
T 1ufx_A 64 TLRGKEHREAARIIAEAFKTKDRDYIDFLVTE 95 (103)
T ss_dssp ECTTCBHHHHHHHHHHHHHCSSCSEEEEEECC
T ss_pred ECCCCCHHHHHHHHHHhcccCCCCeEEEEEEE
Confidence 5778999999999987 46788888764
No 274
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=26.19 E-value=54 Score=25.42 Aligned_cols=27 Identities=15% Similarity=0.342 Sum_probs=24.0
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEe
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQN 28 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~ 28 (311)
++.++++++++..|.+..+.|+|.++.
T Consensus 77 ~v~~~~~~~~~~~l~~~~~~v~l~v~r 103 (125)
T 3hpk_A 77 SIKGKTKVEVAKMIQEVKGEVTIHYNK 103 (125)
T ss_dssp ECTTCCHHHHHHHHHHSCSEEEEEEEE
T ss_pred ECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 467889999999999999999999985
No 275
>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans}
Probab=25.97 E-value=68 Score=25.49 Aligned_cols=51 Identities=12% Similarity=0.049 Sum_probs=29.7
Q ss_pred HHHHHHHhc-CCEEEEecCc-------cccccccccCcccEEEEEcCCCHHHHHHHHcc
Q psy9828 93 SAIRDMMDR-GRHGLLDITP-------NAVDRLNYAQFYPIVIFLRAETKSNVKELRAG 143 (311)
Q Consensus 93 ~AVr~Viek-GKhCILDV~p-------qaVkrL~~a~l~PIVIFIkPpS~e~LKeLR~~ 143 (311)
+.++.+++. |+.+|+|... ..++.|+...+...+||+..|-...++.+..+
T Consensus 67 ~~i~~~l~~~g~~vi~d~~~~~~~~~~~~~~~l~~~~~~~~~i~l~~~~e~~~~R~~~R 125 (183)
T 2vli_A 67 DALQYASREAAGPLIVPVSISDTARHRRLMSGLKDRGLSVHHFTLIAPLNVVLERLRRD 125 (183)
T ss_dssp HHHHHHHHHCSSCEEEEECCCCHHHHHHHHHHHHHTTCCCEEEEEECCHHHHHHHHHTC
T ss_pred HHHHHHHHhCCCcEEEeeeccCHHHHHHHHHHHHhcCCceEEEEEeCCHHHHHHHHHhc
Confidence 455666666 8888888544 22234444444445588887655455555544
No 276
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=25.79 E-value=69 Score=23.28 Aligned_cols=30 Identities=17% Similarity=0.004 Sum_probs=23.6
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeChh
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNRRD 31 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~~~ 31 (311)
++.+++.+++...|...++.++|.++.+..
T Consensus 55 ~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~ 84 (91)
T 2f5y_A 55 PVEHWKCVELAHEIRSCPSEIILLVWRMVP 84 (91)
T ss_dssp ECTTCCHHHHHHHHHTCSSEEEEEEEECC-
T ss_pred ECCCCCHHHHHHHHHcCCCeEEEEEEeCCC
Confidence 356778999999998888889999886554
No 277
>2xb4_A Adenylate kinase; ATP-binding, nucleotide-binding, transferase; HET: SRT; 1.80A {Desulfovibrio gigas} PDB: 3l0s_A* 3l0p_A*
Probab=25.50 E-value=75 Score=26.86 Aligned_cols=52 Identities=13% Similarity=0.085 Sum_probs=34.2
Q ss_pred HHHHHHHhc--CCEEEEecCcccc---cccc----ccCccc-EEEEEcCCCHHHHHHHHccC
Q psy9828 93 SAIRDMMDR--GRHGLLDITPNAV---DRLN----YAQFYP-IVIFLRAETKSNVKELRAGI 144 (311)
Q Consensus 93 ~AVr~Viek--GKhCILDV~pqaV---krL~----~a~l~P-IVIFIkPpS~e~LKeLR~~l 144 (311)
..|++.+++ |+.+|||-.+..+ +.|. ...+.| .+||+..|....++.+..+.
T Consensus 66 ~~i~~~l~~~~g~~vIlDg~~~~~~~~~~l~~~~~~~~~~~d~vi~l~~~~e~~~~Rl~~R~ 127 (223)
T 2xb4_A 66 PMVLETLESKGKDGWLLDGFPRNTVQAQKLFEALQEKGMKINFVIEILLPREVAKNRIMGRR 127 (223)
T ss_dssp HHHHHHHHHHCTTCEEEESCCCSHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHHHHHTBC
T ss_pred HHHHHHHhcccCCeEEEeCCcCCHHHHHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHccc
Confidence 456666777 9999999666553 3332 123445 68888887766667776664
No 278
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=25.22 E-value=54 Score=24.24 Aligned_cols=29 Identities=28% Similarity=0.360 Sum_probs=23.3
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeCh
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNRR 30 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~~ 30 (311)
++++++.++++..|...++.|+|.++.+.
T Consensus 69 ~v~~~~~~~~~~~~~~~g~~v~l~v~R~~ 97 (101)
T 2jik_A 69 DLKNLLHQDAVDLFRNAGYAVSLRVQHRL 97 (101)
T ss_dssp ECSSCCHHHHHHHHHTCCSEEEEEEEEES
T ss_pred ECCCCCHHHHHHHHHhCCCeEEEEEEeCC
Confidence 46778899999999888888999887543
No 279
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=24.90 E-value=62 Score=25.14 Aligned_cols=29 Identities=21% Similarity=0.449 Sum_probs=24.4
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeCh
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNRR 30 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~~ 30 (311)
++.++|+++++.+|...++.|+|.|..+.
T Consensus 78 ~v~~~~~~~~~~~l~~~~~~v~l~v~R~~ 106 (129)
T 2dmz_A 78 NIQGFANHDVVEVLRNAGQVVHLTLVRRK 106 (129)
T ss_dssp CCTTCCHHHHHHHHHHCCSSEEEEEEEES
T ss_pred ECCCCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 57788999999999988899999998543
No 280
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=24.64 E-value=54 Score=24.61 Aligned_cols=29 Identities=14% Similarity=0.364 Sum_probs=24.5
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeCh
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNRR 30 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~~ 30 (311)
++.+++.++++..|....+.|+|.+..+.
T Consensus 72 ~v~~~~~~~~~~~~~~~~~~v~l~v~R~~ 100 (107)
T 1wf8_A 72 SLVGVTQNFAATVLRNTKGNVRFVIGREK 100 (107)
T ss_dssp ECBSCCHHHHHHHHHHCCSEEEEEEEEEC
T ss_pred ECCCCCHHHHHHHHhcCCCeEEEEEEeCC
Confidence 46778999999999998999999998543
No 281
>4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A
Probab=24.63 E-value=1e+02 Score=26.53 Aligned_cols=49 Identities=20% Similarity=0.344 Sum_probs=28.1
Q ss_pred HHHHHhcCCEEEEe----------cCc-----cccccccc---cCccc-EEEEEcCCCHHHHHHHHcc
Q psy9828 95 IRDMMDRGRHGLLD----------ITP-----NAVDRLNY---AQFYP-IVIFLRAETKSNVKELRAG 143 (311)
Q Consensus 95 Vr~ViekGKhCILD----------V~p-----qaVkrL~~---a~l~P-IVIFIkPpS~e~LKeLR~~ 143 (311)
|+..+++|+++|+| -.+ .-++.|.. ..+.| .+||+..|....++.+++|
T Consensus 102 i~~~l~~g~~Vi~DRy~~s~~ayqg~~r~~~~~~~~~l~~~~~~~~~pd~vi~L~~~~e~~~~R~~~R 169 (229)
T 4eaq_A 102 VIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNVSAEVGRERIIKN 169 (229)
T ss_dssp CHHHHHTTCEEEEECCHHHHCCCCCCCSCSCHHHHHHHHHHHHTTCCCSEEEEEECCHHHHHHHHHHC
T ss_pred HHHHHHCCCEEEECCchhHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCCEEEEEeCCHHHHHHHHHhc
Confidence 34556789999999 322 22223322 12233 4788888765555666555
No 282
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus}
Probab=24.63 E-value=1.3e+02 Score=24.38 Aligned_cols=77 Identities=12% Similarity=0.046 Sum_probs=42.1
Q ss_pred CEEEEecCccccccccccCcccEEEEEcCCCHHHHHHHHccC-Ccc-------------cCCCcceEEEecCCccchhhh
Q psy9828 103 RHGLLDITPNAVDRLNYAQFYPIVIFLRAETKSNVKELRAGI-PKL-------------NSAQFFSVVIFLRAETKSNVK 168 (311)
Q Consensus 103 KhCILDV~pqaVkrL~~a~l~PIVIFIkPpS~e~LKeLR~~l-~e~-------------~~~hlFd~vI~nddl~~~~~~ 168 (311)
..+|+|...-.-. ....+...+||+..|....++++..|. ..+ .+....|.+|.|+ .+ .+
T Consensus 106 ~~vive~~~l~~~--~~~~~~~~~i~l~~~~e~~~~Rl~~R~~~~~~~~~~~~~~~~~~~~~~~ad~vId~~-~~---~~ 179 (204)
T 2if2_A 106 TLFILEASLLVEK--GTYKNYDKLIVVYAPYEVCKERAIKRGMSEEDFERRWKKQMPIEEKVKYADYVIDNS-GS---IE 179 (204)
T ss_dssp CCEEEECSCSTTT--TCGGGSSEEEEECCCHHHHHHHHHHTCCCHHHHHHHHTTSCCHHHHGGGCSEECCCS-SC---HH
T ss_pred CEEEEEccccccC--CchhhCCEEEEEECCHHHHHHHHHHcCCCHHHHHHHHHhCCChhHHHhcCCEEEECC-CC---HH
Confidence 7888986421111 112345689999987655556654442 211 1223446666655 22 23
Q ss_pred hhccccHHHHHHHHHHHhcCCCC
Q psy9828 169 ELRAGIPNYIKTISLINFNGSSP 191 (311)
Q Consensus 169 ~~~~~~~~y~~Lk~~I~~eQs~p 191 (311)
+ ++.++.+++......|
T Consensus 180 ~------~~~~i~~~l~~~~~~~ 196 (204)
T 2if2_A 180 E------TYKQVKKVYEELTRDP 196 (204)
T ss_dssp H------HHHHHHHHHHTTCC--
T ss_pred H------HHHHHHHHHHHHhcCh
Confidence 3 8889998887765554
No 283
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=24.35 E-value=38 Score=25.71 Aligned_cols=28 Identities=32% Similarity=0.495 Sum_probs=23.5
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeC
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNR 29 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~ 29 (311)
++.+++.+|++..|....+.|+|.++.+
T Consensus 76 ~v~~~~~~~~~~~l~~~g~~v~l~v~r~ 103 (111)
T 1uju_A 76 SLLGLTHGEAVQLLRSVGDTLTVLVCDG 103 (111)
T ss_dssp BCTTSCHHHHHHHHSSCSSEEEECCCCC
T ss_pred ECCCCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 5678899999999998888999888644
No 284
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=24.07 E-value=73 Score=24.30 Aligned_cols=28 Identities=7% Similarity=0.207 Sum_probs=24.3
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeC
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNR 29 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~ 29 (311)
++.+++.++++..+...+++|+|.+...
T Consensus 57 ~v~~~~~~~~~~~~~~~~~~v~l~v~R~ 84 (106)
T 2la8_A 57 ALEGLPFQVCYALFKGANGKVSMEVTRP 84 (106)
T ss_dssp BCSSSCHHHHHHHHHSCBSCEEEEEEEC
T ss_pred ECCCCCHHHHHHHHhCCCCeEEEEEEeC
Confidence 5678899999999999999999999854
No 285
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=24.06 E-value=4.5 Score=29.80 Aligned_cols=43 Identities=16% Similarity=0.282 Sum_probs=25.3
Q ss_pred CCHHHHHHHHhcCCCcEEEEEEeChhHHHHHHhcc---CCCeeEEE
Q psy9828 6 ITREEAVLFLLSLQDQIHLIVQNRRDEYEHVVASQ---RGDSFHIK 48 (311)
Q Consensus 6 ~T~EEA~~~L~~~~~~VtL~vq~~~~~Y~~i~~~~---~gDSFYVR 48 (311)
+|.+||..+|.=..+.+....+-=...|++++... .|.|||+=
T Consensus 1 mt~~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~yl~ 46 (65)
T 2guz_B 1 MTLDESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSFYLQ 46 (65)
T ss_dssp CCHHHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCHHHH
T ss_pred CCHHHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCHHHH
Confidence 58899999884433211000011125688888775 57888863
No 286
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=23.98 E-value=85 Score=25.53 Aligned_cols=48 Identities=15% Similarity=0.182 Sum_probs=27.3
Q ss_pred HHHHHHHhcCCEEEEecC---------------cccccccccc-CcccEEEEEcCCCHHHHHHH
Q psy9828 93 SAIRDMMDRGRHGLLDIT---------------PNAVDRLNYA-QFYPIVIFLRAETKSNVKEL 140 (311)
Q Consensus 93 ~AVr~ViekGKhCILDV~---------------pqaVkrL~~a-~l~PIVIFIkPpS~e~LKeL 140 (311)
+.|+..+.+|+.+|+|-. ...+..+... ...-.+||+..|-...++.+
T Consensus 84 ~~i~~~l~~~~~vi~dr~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~d~vi~l~~~~e~~~~Rl 147 (215)
T 1nn5_A 84 PLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGLPKPDLVLFLQLQLADAAKRG 147 (215)
T ss_dssp HHHHHHHHTTCEEEEESCHHHHHHHHHTSTTCCHHHHHGGGTTSBCCSEEEEEECCHHHHHHC-
T ss_pred HHHHHHHHCCCEEEEeCCcccHHHHHhhcCCCCHHHHHHHHhCCCCCCEEEEEeCCHHHHHHHh
Confidence 457777788999999932 2223333221 12346888888654444444
No 287
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=23.57 E-value=70 Score=23.09 Aligned_cols=28 Identities=21% Similarity=0.240 Sum_probs=23.2
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeC
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNR 29 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~ 29 (311)
++.+++.+++...+...++.|+|.++..
T Consensus 61 ~v~~~~~~~~~~~~~~~~~~v~l~v~R~ 88 (92)
T 2qg1_A 61 DVRNATQEAVAALLKCSLGTVTLEVGRI 88 (92)
T ss_dssp ECTTCCHHHHHHHHHHCCSEEEEEEECC
T ss_pred ECCCCCHHHHHHHHHcCCCeEEEEEEcc
Confidence 4677889999999998889999998743
No 288
>1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1
Probab=23.57 E-value=66 Score=25.25 Aligned_cols=51 Identities=8% Similarity=-0.082 Sum_probs=31.0
Q ss_pred HHHHHHH---hcCCEEEEecCcccc---cccc----ccCcccEEEEEcCCCHHHHHHHHcc
Q psy9828 93 SAIRDMM---DRGRHGLLDITPNAV---DRLN----YAQFYPIVIFLRAETKSNVKELRAG 143 (311)
Q Consensus 93 ~AVr~Vi---ekGKhCILDV~pqaV---krL~----~a~l~PIVIFIkPpS~e~LKeLR~~ 143 (311)
+.++..+ ++|+.+|+|-..... +.+. ...+...+||+..|....++.+..|
T Consensus 66 ~~~~~~l~~~~~g~~vi~d~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~R~~~R 126 (181)
T 1ly1_A 66 DTAKSILYGGDSVKGVIISDTNLNPERRLAWETFAKEYGWKVEHKVFDVPWTELVKRNSKR 126 (181)
T ss_dssp HHHHHHHTSCSSCCEEEECSCCCSHHHHHHHHHHHHHHTCEEEEEECCCCHHHHHHHHTTC
T ss_pred HHHHHHHhhccCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEEeCCHHHHHHHHhcc
Confidence 5567777 789999999766432 2232 1223347899997554444555443
No 289
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.35 E-value=33 Score=26.52 Aligned_cols=30 Identities=27% Similarity=0.358 Sum_probs=25.3
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeChh
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNRRD 31 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~~~ 31 (311)
++.++++++++..|....+.|+|.|+.+..
T Consensus 79 ~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~ 108 (120)
T 2eno_A 79 DLKNLLHQDAVDLFRNAGYAVSLRVQHRLQ 108 (120)
T ss_dssp ECCSCCHHHHHHHHHHHCSEEEEEEEEEEE
T ss_pred ECCCCCHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 467889999999998888899999986654
No 290
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=23.32 E-value=53 Score=23.98 Aligned_cols=28 Identities=25% Similarity=0.425 Sum_probs=23.6
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeC
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNR 29 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~ 29 (311)
++.+++.++++..+...++.|+|.+..+
T Consensus 65 ~v~~~~~~~~~~~~~~~~~~v~l~v~R~ 92 (95)
T 1mfg_A 65 SFINIEHGQAVSLLKTFQNTVELIIVRE 92 (95)
T ss_dssp ECTTCBHHHHHHHHHHCCSEEEEEEEEE
T ss_pred EcCCCCHHHHHHHhhcCCCeEEEEEEeC
Confidence 4677889999999998889999998754
No 291
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=23.30 E-value=53 Score=24.02 Aligned_cols=29 Identities=21% Similarity=0.283 Sum_probs=23.7
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeCh
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNRR 30 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~~ 30 (311)
++.+++.+++...|...++.++|.++.+.
T Consensus 64 ~v~~~~~~~~~~~l~~~g~~v~l~v~R~~ 92 (97)
T 2jil_A 64 RLLGTTHAEAMSILKQCGQEAALLIEYDV 92 (97)
T ss_dssp ECSSCCHHHHHHHHHHSCSEEEEEEEEEC
T ss_pred ECCCCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 46678899999999887889999988544
No 292
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=23.07 E-value=69 Score=24.85 Aligned_cols=29 Identities=17% Similarity=0.263 Sum_probs=23.0
Q ss_pred CCCCCCHHHHHHHHhcC--CCcEEEEEEeCh
Q psy9828 2 DMKGITREEAVLFLLSL--QDQIHLIVQNRR 30 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~--~~~VtL~vq~~~ 30 (311)
++.+++++|++.+|... ++.|+|.|+.+.
T Consensus 76 ~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 106 (123)
T 1ueq_A 76 CVLGHTHADVVKLFQSVPIGQSVNLVLCRGY 106 (123)
T ss_dssp ECTTSCHHHHHHHHHTSCTTCEEEEEEEESC
T ss_pred ECCCCCHHHHHHHHHhCCCCCeEEEEEEeCC
Confidence 45678999999999884 588999988543
No 293
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=22.94 E-value=66 Score=24.33 Aligned_cols=30 Identities=17% Similarity=0.352 Sum_probs=25.5
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeChh
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNRRD 31 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~~~ 31 (311)
++.+++.++++..+...++.|+|.+..+..
T Consensus 67 ~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~ 96 (113)
T 2g5m_B 67 SLVGVTQSFAASVLRNTKGRVRFMIGRERP 96 (113)
T ss_dssp ECSSCCHHHHHHHHHHSCSSCEEEEEECCC
T ss_pred ECCCCCHHHHHHHHhcCCCeEEEEEEeCCC
Confidence 467789999999999999999999986554
No 294
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=22.82 E-value=62 Score=23.67 Aligned_cols=29 Identities=21% Similarity=0.355 Sum_probs=23.7
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeCh
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNRR 30 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~~ 30 (311)
++.+++.++++..|....+.|+|.+..+.
T Consensus 62 ~v~~~~~~~~~~~~~~~~~~v~l~v~R~~ 90 (98)
T 2opg_A 62 DLRKATHDEAINVLRQTPQRVRLTLYRDE 90 (98)
T ss_dssp ECTTCCHHHHHHHHHTCCSEEEEEEEECS
T ss_pred ECCCCCHHHHHHHHHhCCCeEEEEEEcCC
Confidence 46778899999999888899999987544
No 295
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=22.81 E-value=70 Score=23.78 Aligned_cols=28 Identities=18% Similarity=0.329 Sum_probs=22.9
Q ss_pred CCCCCCHHHHHHHHhcC--CCcEEEEEEeC
Q psy9828 2 DMKGITREEAVLFLLSL--QDQIHLIVQNR 29 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~--~~~VtL~vq~~ 29 (311)
++++++++|++..|+.. .++|+|.++.+
T Consensus 61 ~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 90 (96)
T 1ujv_A 61 NVQNLSHTEVVDILKDCPIGSETSLIIHRG 90 (96)
T ss_dssp ECSSCCHHHHHHHHHHSCTTSEEEEEEECC
T ss_pred ECCCCCHHHHHHHHHcCCCCCEEEEEEEEC
Confidence 46788999999999885 57899998754
No 296
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=22.60 E-value=63 Score=23.88 Aligned_cols=29 Identities=24% Similarity=0.352 Sum_probs=24.3
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeCh
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNRR 30 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~~ 30 (311)
++++++.++++..|...++.|+|.+..+.
T Consensus 66 ~v~~~~~~~~~~~~~~~g~~v~l~v~R~~ 94 (102)
T 2i1n_A 66 DVSEVVHSRAVEALKEAGPVVRLVVRRRQ 94 (102)
T ss_dssp ECSSCCHHHHHHHHHHSCSEEEEEEEEEC
T ss_pred ECCCCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 46778999999999998899999988543
No 297
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=22.54 E-value=84 Score=23.00 Aligned_cols=28 Identities=21% Similarity=0.375 Sum_probs=22.3
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeC
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNR 29 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~ 29 (311)
++.+++.+++..+|...++.|+|.++.+
T Consensus 62 ~v~~~~~~~~~~~l~~~g~~v~l~v~R~ 89 (97)
T 1n7e_A 62 SLKGKPLSEAIHLLQMAGETVTLKIKKQ 89 (97)
T ss_dssp ECTTCCHHHHHHHHHTCCSEEEEEEECC
T ss_pred ECCCCCHHHHHHHHHcCCCeEEEEEEeC
Confidence 3566789999998887778899988743
No 298
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=22.21 E-value=77 Score=23.67 Aligned_cols=30 Identities=30% Similarity=0.327 Sum_probs=24.8
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeChh
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNRRD 31 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~~~ 31 (311)
++.+++.++++..+...++.|+|.+..+..
T Consensus 65 ~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~ 94 (105)
T 2awx_A 65 SLEEVTHEEAVTALKNTSDFVYLKVAKPTS 94 (105)
T ss_dssp ECTTCBHHHHHHHHHSCCSEEEEEEECCCC
T ss_pred ECCCCCHHHHHHHHHcCCCeEEEEEEcCCC
Confidence 467789999999999888999999985543
No 299
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=22.07 E-value=81 Score=23.25 Aligned_cols=28 Identities=7% Similarity=0.214 Sum_probs=23.8
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeC
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNR 29 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~ 29 (311)
++.+++.++++..+....++|+|.+...
T Consensus 63 ~v~~~~~~~~~~~~~~~~~~v~l~v~R~ 90 (96)
T 2qkv_A 63 ALEGLPFQVSYALFKGANGKVSMEVTRP 90 (96)
T ss_dssp ECTTCCHHHHHHHHHTCSSEEEEEEECC
T ss_pred ECCCCCHHHHHHHHhcCCCcEEEEEEeC
Confidence 4677899999999999999999998843
No 300
>1vht_A Dephospho-COA kinase; structural genomics, transferase; HET: BA3; 1.59A {Escherichia coli} SCOP: c.37.1.1 PDB: 1vhl_A* 1viy_A 1t3h_A 1n3b_A
Probab=21.78 E-value=1.9e+02 Score=23.76 Aligned_cols=73 Identities=8% Similarity=-0.061 Sum_probs=38.5
Q ss_pred cCCEEEEecCccccccccccCcccEEEEEcCCCHHHHHHHHcc--CCcc-------------cCCCcceEEEecCC-ccc
Q psy9828 101 RGRHGLLDITPNAVDRLNYAQFYPIVIFLRAETKSNVKELRAG--IPKL-------------NSAQFFSVVIFLRA-ETK 164 (311)
Q Consensus 101 kGKhCILDV~pqaVkrL~~a~l~PIVIFIkPpS~e~LKeLR~~--l~e~-------------~~~hlFd~vI~ndd-l~~ 164 (311)
.|..+|+|... +....-....-.+|||..+....++.+..| +... .+....|.+|.|+. .++
T Consensus 106 ~~~~vi~~~~~--l~~~~~~~~~d~vi~l~~~~e~~~~Rl~~R~~~~~~~~~~~~~~~~~~~~~~~~ad~vId~~~~~~~ 183 (218)
T 1vht_A 106 TSPYVLWVVPL--LVENSLYKKANRVLVVDVSPETQLKRTMQRDDVTREHVEQILAAQATREARLAVADDVIDNNGAPDA 183 (218)
T ss_dssp CSSEEEEECTT--TTTTTGGGGCSEEEEEECCHHHHHHHHHHHHTCCHHHHHHHHHHSCCHHHHHHHCSEEEECSSCTTS
T ss_pred CCCEEEEEeee--eeccCccccCCEEEEEECCHHHHHHHHHHcCCCCHHHHHHHHHhcCChHHHHHhCCEEEECCCCHHH
Confidence 36667777632 111111123458999998655555554333 3221 11234577887773 444
Q ss_pred hhhhhhccccHHHHHHHHHHHh
Q psy9828 165 SNVKELRAGIPNYIKTISLINF 186 (311)
Q Consensus 165 ~~~~~~~~~~~~y~~Lk~~I~~ 186 (311)
++.++.+++..
T Consensus 184 -----------~~~~I~~~l~~ 194 (218)
T 1vht_A 184 -----------IASDVARLHAH 194 (218)
T ss_dssp -----------HHHHHHHHHHH
T ss_pred -----------HHHHHHHHHHH
Confidence 66666666654
No 301
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=21.65 E-value=51 Score=25.01 Aligned_cols=30 Identities=23% Similarity=0.396 Sum_probs=23.9
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeChh
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNRRD 31 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~~~ 31 (311)
++.+++.++++..|....+.|+|.|..+..
T Consensus 75 ~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~ 104 (116)
T 2dm8_A 75 DLRNSSHEEAITALRQTPQKVRLVVYRDEA 104 (116)
T ss_dssp ECSSSCHHHHHHHHHTCCSEEEEEEECCSS
T ss_pred ECCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Confidence 466788999999998888899999875443
No 302
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=21.11 E-value=87 Score=22.51 Aligned_cols=28 Identities=21% Similarity=0.401 Sum_probs=22.9
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeC
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNR 29 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~ 29 (311)
++.+++++++...|...++.|+|.+...
T Consensus 59 ~v~~~~~~~~~~~l~~~~~~v~l~v~r~ 86 (90)
T 2he4_A 59 NVEGLRHAEVVASIKAREDEARLLVVGP 86 (90)
T ss_dssp ECTTSCHHHHHHHHTTSSSEEEEEEECC
T ss_pred ECCCCCHHHHHHHHHcCCCcEEEEEEcc
Confidence 4667888999999988888999988743
No 303
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii}
Probab=21.10 E-value=1.2e+02 Score=24.44 Aligned_cols=49 Identities=16% Similarity=0.175 Sum_probs=29.3
Q ss_pred HHHHHhcCCEEEEecCccc--------------ccccccc-CcccEEEEEcCCCHHHHHHHH-cc
Q psy9828 95 IRDMMDRGRHGLLDITPNA--------------VDRLNYA-QFYPIVIFLRAETKSNVKELR-AG 143 (311)
Q Consensus 95 Vr~ViekGKhCILDV~pqa--------------VkrL~~a-~l~PIVIFIkPpS~e~LKeLR-~~ 143 (311)
|+..+++|+.+|+|-.+.. ++.|... ...-.+||+..|....++.+. .+
T Consensus 79 i~~~l~~g~~vi~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vi~l~~~~e~~~~Rl~~~R 143 (213)
T 2plr_A 79 ILPMLKSGFIVISDRYIYTAYARDSVRGVDIDWVKKLYSFAIKPDITFYIRVSPDIALERIKKSK 143 (213)
T ss_dssp HHHHHHTTCEEEEESCHHHHHHHHHTTTCCHHHHHHHTTTSCCCSEEEEEECCHHHHHHHHHHTT
T ss_pred HHHHHhCCCEEEEeCcHhHHHHHHHhhCCCHHHHHHHHhcCCCCCEEEEEeCCHHHHHHHHhccc
Confidence 3455678999999975432 2333221 113368899886655566665 44
No 304
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=20.82 E-value=94 Score=21.94 Aligned_cols=27 Identities=22% Similarity=0.164 Sum_probs=21.9
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEe
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQN 28 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~ 28 (311)
++.+++.+++...+....+.++|.++.
T Consensus 56 ~v~~~~~~~~~~~~~~~~~~v~l~v~R 82 (85)
T 1rgw_A 56 NTDTMTHLEAQNKIKSASYNLSLTLQK 82 (85)
T ss_dssp ECTTCCHHHHHHHHTTCSSCEEEEEES
T ss_pred ECCCcCHHHHHHHHHcCCCeEEEEEEe
Confidence 356778899999888888889888863
No 305
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=20.77 E-value=86 Score=22.67 Aligned_cols=28 Identities=18% Similarity=0.165 Sum_probs=22.6
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeC
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNR 29 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~ 29 (311)
++.+++.+++..+|...++.|+|.++.+
T Consensus 58 ~v~~~~~~~~~~~l~~~g~~v~l~v~r~ 85 (91)
T 2vsp_A 58 NVLDEPYEKVVDRIQSSGKNVTLLVCGK 85 (91)
T ss_dssp ECTTSCHHHHHHHHTTSCSEEEEEEEC-
T ss_pred ECCCCCHHHHHHHHHcCCCEEEEEEEeC
Confidence 3567799999999988888999998844
No 306
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=20.47 E-value=93 Score=22.47 Aligned_cols=28 Identities=18% Similarity=0.319 Sum_probs=23.4
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeC
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNR 29 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~ 29 (311)
++.++++++++..|....+.+.+++..+
T Consensus 60 ~v~~~~~~~~~~~l~~~~~~~~~~~~r~ 87 (95)
T 3r68_A 60 SVEALDHDGVVEMIRKGGDQTTLLVLDK 87 (95)
T ss_dssp ECTTCCHHHHHHHHHTTTTEEEEEEEEC
T ss_pred ECCCCCHHHHHHHHHhCCCeEEEEEECC
Confidence 4678899999999999888888888744
No 307
>2vkc_A NEDD4-binding protein 2; human BCL3 binding protein, alternative splicing, homologous recombination, mismatch repair, small MUTS related; NMR {Homo sapiens}
Probab=20.13 E-value=34 Score=27.97 Aligned_cols=15 Identities=33% Similarity=0.658 Sum_probs=13.3
Q ss_pred CCCCCCCHHHHHHHH
Q psy9828 1 MDMKGITREEAVLFL 15 (311)
Q Consensus 1 vdlr~~T~EEA~~~L 15 (311)
+||.|+|.+||...|
T Consensus 56 LDLHGl~v~EA~~~L 70 (135)
T 2vkc_A 56 LDLHGLHVDEALEHL 70 (135)
T ss_dssp EECTTCCHHHHHHHH
T ss_pred EEeCCCcHHHHHHHH
Confidence 589999999999766
No 308
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=20.07 E-value=83 Score=23.06 Aligned_cols=28 Identities=21% Similarity=0.299 Sum_probs=23.6
Q ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEEeC
Q psy9828 2 DMKGITREEAVLFLLSLQDQIHLIVQNR 29 (311)
Q Consensus 2 dlr~~T~EEA~~~L~~~~~~VtL~vq~~ 29 (311)
++.+++.++++..|...++.++|.+...
T Consensus 65 ~v~~~~~~~~~~~l~~~g~~v~l~v~r~ 92 (99)
T 3khf_A 65 SVLGLVHMDVVELLLKSGNKISLRTTAL 92 (99)
T ss_dssp ECTTCCHHHHHHHHHHSCSEEEEEEECS
T ss_pred ECCCCCHHHHHHHHhcCCCEEEEEEEEC
Confidence 3567899999999998889999998843
Done!