Query psy9829
Match_columns 333
No_of_seqs 293 out of 553
Neff 5.7
Searched_HMMs 29240
Date Fri Aug 16 20:43:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9829.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9829hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gsl_A Disks large homolog 4; 99.8 7.3E-21 2.5E-25 166.5 12.8 169 86-285 14-192 (196)
2 3r0h_A INAD, inactivation-NO-a 99.8 1.3E-18 4.4E-23 154.5 12.7 162 86-284 27-197 (206)
3 2xkx_A Disks large homolog 4; 99.8 3.3E-18 1.1E-22 180.0 16.0 168 87-285 69-246 (721)
4 1p1d_A PDZ45, glutamate recept 99.7 4.5E-17 1.5E-21 144.5 14.0 166 87-283 17-195 (196)
5 2qt5_A Glutamate receptor-inte 99.7 3.4E-16 1.2E-20 138.8 14.2 168 85-284 16-196 (200)
6 2xkx_A Disks large homolog 4; 99.6 4.7E-15 1.6E-19 156.0 16.2 185 87-284 164-392 (721)
7 3suz_A Amyloid beta A4 precurs 99.5 2.2E-15 7.6E-20 148.0 3.7 154 87-282 215-373 (388)
8 3tvt_A Disks large 1 tumor sup 99.4 5.9E-14 2E-18 133.6 4.2 94 2-95 165-259 (292)
9 3e17_A Tight junction protein 99.3 2E-12 6.7E-17 101.2 7.0 70 212-284 13-82 (88)
10 3kfv_A Tight junction protein 99.3 7.1E-13 2.4E-17 127.1 4.6 87 8-94 180-270 (308)
11 3shw_A Tight junction protein 99.3 1E-12 3.4E-17 132.5 4.8 87 9-95 264-354 (468)
12 1w9e_A Syntenin 1; cell adhesi 99.3 3.7E-11 1.3E-15 103.7 13.0 145 87-280 15-163 (166)
13 3tsz_A Tight junction protein 99.3 1.8E-12 6E-17 127.8 5.0 87 9-95 272-362 (391)
14 1kjw_A Postsynaptic density pr 99.3 2.4E-12 8.2E-17 122.3 4.6 92 2-95 170-264 (295)
15 3cbz_A Dishevelled-2; PDZ doma 99.1 7.6E-11 2.6E-15 95.4 7.8 63 220-285 33-98 (108)
16 1wfg_A Regulating synaptic mem 99.1 8.8E-11 3E-15 98.5 7.7 62 221-285 66-129 (131)
17 1wg6_A Hypothetical protein (r 99.1 6.1E-11 2.1E-15 98.9 6.5 64 220-286 55-125 (127)
18 2db5_A INAD-like protein; PDZ 99.1 1.4E-10 4.8E-15 96.2 8.1 64 220-286 54-118 (128)
19 1uhp_A Hypothetical protein KI 99.1 1.8E-10 6.2E-15 92.6 8.2 66 220-288 41-106 (107)
20 3b76_A E3 ubiquitin-protein li 99.1 7.3E-11 2.5E-15 97.6 5.9 61 220-283 53-113 (118)
21 2iwo_A Multiple PDZ domain pro 99.1 1.4E-10 4.6E-15 96.0 7.2 63 220-285 53-115 (120)
22 1wf8_A Neurabin-I; PDZ domain, 99.1 1.4E-10 4.7E-15 93.3 6.9 64 220-286 40-103 (107)
23 1i16_A Interleukin 16, LCF; cy 99.1 2.3E-10 7.9E-15 95.6 8.2 63 220-285 57-120 (130)
24 1wi4_A Synip, syntaxin binding 99.1 1.8E-10 6.1E-15 93.6 7.2 61 221-284 42-106 (109)
25 1v62_A KIAA1719 protein; struc 99.1 2.1E-10 7.3E-15 94.0 7.5 63 221-286 43-105 (117)
26 3gge_A PDZ domain-containing p 99.1 2.3E-10 7.9E-15 92.1 7.4 61 220-283 28-90 (95)
27 3axa_A Afadin, nectin-3, prote 99.1 3.3E-10 1.1E-14 90.7 7.9 65 220-287 38-102 (106)
28 2d92_A INAD-like protein; PDZ 99.1 2.8E-10 9.5E-15 91.9 7.2 62 220-284 44-106 (108)
29 3egg_C Spinophilin; PP1, serin 99.1 1.9E-10 6.5E-15 101.1 6.7 60 220-282 111-170 (170)
30 1uep_A Membrane associated gua 99.1 3.2E-10 1.1E-14 90.7 7.4 63 220-285 34-98 (103)
31 2byg_A Channel associated prot 99.0 3.1E-10 1.1E-14 93.3 6.9 61 220-283 54-114 (117)
32 3o46_A Maguk P55 subfamily mem 99.0 3.3E-10 1.1E-14 88.7 6.8 62 220-284 28-89 (93)
33 2g5m_B Neurabin-2; spinophilin 99.0 3.2E-10 1.1E-14 91.8 6.9 65 220-287 35-99 (113)
34 1r6j_A Syntenin 1; PDZ, membra 99.0 2.5E-10 8.4E-15 89.3 5.9 62 214-280 18-79 (82)
35 2csj_A TJP2 protein; PDZ domai 99.0 4.1E-10 1.4E-14 92.0 7.6 79 87-176 25-106 (117)
36 1d5g_A Human phosphatase HPTP1 99.0 4.8E-10 1.7E-14 88.0 7.6 62 220-284 33-94 (96)
37 4amh_A Disks large homolog 1; 99.0 4.3E-10 1.5E-14 90.7 7.4 63 220-285 32-94 (106)
38 1kwa_A Hcask/LIN-2 protein; PD 99.0 2.9E-10 9.9E-15 88.7 6.2 62 220-284 25-86 (88)
39 2jik_A Synaptojanin-2 binding 99.0 4.1E-10 1.4E-14 89.3 7.2 63 220-285 37-99 (101)
40 2i1n_A Discs, large homolog 3; 99.0 5E-10 1.7E-14 89.0 7.6 64 220-286 34-97 (102)
41 2eno_A Synaptojanin-2-binding 99.0 6E-10 2E-14 91.4 7.9 65 220-287 47-111 (120)
42 2awx_A Synapse associated prot 99.0 4.5E-10 1.6E-14 89.9 6.8 64 220-286 33-96 (105)
43 1ufx_A KIAA1526 protein; PDZ d 99.0 3.2E-10 1.1E-14 91.3 5.6 63 222-287 34-101 (103)
44 2vwr_A Ligand of NUMB protein 99.0 7.9E-10 2.7E-14 86.7 7.7 63 220-285 29-91 (95)
45 2jil_A GRIP1 protein, glutamat 99.0 7.6E-10 2.6E-14 87.0 7.6 63 220-285 32-94 (97)
46 2rcz_A Tight junction protein 99.0 6.1E-10 2.1E-14 84.0 6.7 68 212-282 13-80 (81)
47 2ehr_A INAD-like protein; PDZ 99.0 1.5E-09 5E-14 88.5 9.5 63 220-285 50-112 (117)
48 1q7x_A PDZ2B domain of PTP-BAS 99.0 3.7E-10 1.3E-14 90.8 5.6 63 220-285 42-104 (108)
49 3cyy_A Tight junction protein 99.0 8.3E-10 2.8E-14 85.7 7.3 70 212-284 15-84 (92)
50 4a8c_A Periplasmic PH-dependen 99.0 5.3E-09 1.8E-13 104.0 15.0 149 107-284 262-421 (436)
51 2fne_A Multiple PDZ domain pro 99.0 7E-10 2.4E-14 91.3 7.3 62 220-284 53-114 (117)
52 1ujd_A KIAA0559 protein; PDZ d 99.0 6.6E-10 2.3E-14 91.0 7.0 62 221-285 50-111 (117)
53 1wha_A KIAA0147 protein, scrib 99.0 7.3E-10 2.5E-14 88.7 7.1 62 220-284 38-99 (105)
54 2la8_A Inactivation-NO-after-p 99.0 1.6E-09 5.5E-14 87.7 9.0 62 220-284 25-86 (106)
55 2dc2_A GOPC, golgi associated 99.0 6.5E-10 2.2E-14 89.0 6.4 62 220-284 35-96 (103)
56 2qg1_A Multiple PDZ domain pro 99.0 8.7E-10 3E-14 85.8 6.8 61 220-283 29-89 (92)
57 2kpk_A Membrane-associated gua 99.0 1.7E-09 5.6E-14 90.2 8.9 64 221-287 44-109 (129)
58 2fe5_A Presynaptic protein SAP 99.0 9.1E-10 3.1E-14 85.9 6.9 61 220-283 33-93 (94)
59 3nfk_A Tyrosine-protein phosph 99.0 9.4E-10 3.2E-14 88.1 7.1 60 220-282 43-107 (107)
60 1ex7_A Guanylate kinase; subst 99.0 2.2E-10 7.6E-15 102.1 3.7 85 2-86 68-154 (186)
61 1v6b_A Harmonin isoform A1; st 99.0 8.8E-10 3E-14 90.6 6.8 61 221-284 44-108 (118)
62 2opg_A Multiple PDZ domain pro 99.0 1.4E-09 4.9E-14 85.5 7.7 63 220-285 30-92 (98)
63 4e34_A Golgi-associated PDZ an 99.0 9.8E-10 3.4E-14 84.7 6.4 59 220-281 28-86 (87)
64 1ueq_A Membrane associated gua 99.0 2.6E-09 8.9E-14 88.1 9.4 64 220-286 44-109 (123)
65 2djt_A Unnamed protein product 99.0 1.2E-09 4E-14 87.1 7.0 64 220-286 38-101 (104)
66 4dey_A Voltage-dependent L-typ 98.9 4.6E-10 1.6E-14 108.7 5.5 82 14-95 217-303 (337)
67 4amh_A Disks large homolog 1; 98.9 7.3E-10 2.5E-14 89.3 5.8 77 87-173 12-91 (106)
68 2dlu_A INAD-like protein; PDZ 98.9 1.8E-09 6.3E-14 87.1 8.1 63 220-285 38-100 (111)
69 1n7e_A AMPA receptor interacti 98.9 1.8E-09 6E-14 85.1 7.7 63 220-285 30-92 (97)
70 2o2t_A Multiple PDZ domain pro 98.9 7.9E-10 2.7E-14 90.0 5.9 63 220-285 49-112 (117)
71 2qkv_A Inactivation-NO-after-p 98.9 8.9E-10 3.1E-14 87.0 6.0 63 220-285 31-93 (96)
72 2q9v_A Membrane-associated gua 98.9 7.3E-10 2.5E-14 85.9 5.1 60 220-282 27-88 (90)
73 2dkr_A LIN-7 homolog B; LIN-7B 98.9 1.4E-09 4.9E-14 84.6 6.7 62 220-284 30-91 (93)
74 2yt7_A Amyloid beta A4 precurs 98.9 2.7E-09 9.2E-14 85.0 8.3 61 221-284 38-100 (101)
75 3rle_A Golgi reassembly-stacki 98.9 3.9E-09 1.3E-13 94.8 10.3 155 87-283 1-170 (209)
76 2h2b_A Tight junction protein 98.9 3.3E-09 1.1E-13 84.9 8.8 77 87-174 18-97 (107)
77 1um1_A KIAA1849 protein, RSGI 98.9 1.9E-09 6.5E-14 86.8 7.4 61 220-283 36-96 (110)
78 1qav_A Alpha-1 syntrophin (res 98.9 1.8E-09 6.1E-14 83.8 6.9 59 220-281 30-88 (90)
79 1nf3_C PAR-6B; semi-CRIB motif 98.9 1.8E-09 6.1E-14 89.8 7.3 62 220-284 65-126 (128)
80 2q3g_A PDZ and LIM domain prot 98.9 1.9E-09 6.5E-14 83.5 6.9 61 220-284 27-87 (89)
81 2byg_A Channel associated prot 98.9 1.3E-09 4.6E-14 89.5 6.3 78 87-174 34-114 (117)
82 2i1n_A Discs, large homolog 3; 98.9 2.5E-09 8.7E-14 84.8 7.8 78 87-174 14-94 (102)
83 2daz_A INAD-like protein; PDZ 98.9 1.7E-09 5.9E-14 89.3 6.9 62 220-284 51-112 (124)
84 1ihj_A INAD; intermolecular di 98.9 1.9E-09 6.6E-14 84.8 6.9 61 220-283 37-97 (98)
85 1uju_A Scribble; PDZ domain, c 98.9 5.3E-10 1.8E-14 90.4 3.6 64 220-286 44-107 (111)
86 2i04_A Membrane-associated gua 98.9 2.1E-09 7.1E-14 82.5 6.8 59 220-281 25-85 (85)
87 1uew_A Membrane associated gua 98.9 4E-09 1.4E-13 85.7 8.8 63 221-286 44-106 (114)
88 2jre_A C60-1 PDZ domain peptid 98.9 1.8E-09 6E-14 86.6 6.4 62 220-284 44-105 (108)
89 2uzc_A Human pdlim5, PDZ and L 98.9 3.2E-09 1.1E-13 81.9 7.6 60 220-283 27-86 (88)
90 2dm8_A INAD-like protein; PDZ 98.9 2.2E-09 7.5E-14 87.1 6.9 65 220-287 43-107 (116)
91 1wha_A KIAA0147 protein, scrib 98.9 2.1E-09 7.3E-14 85.9 6.8 80 86-174 16-98 (105)
92 2dmz_A INAD-like protein; PDZ 98.9 2.4E-09 8.1E-14 88.8 7.2 63 220-285 46-108 (129)
93 3hpk_A Protein interacting wit 98.9 2E-09 7E-14 88.8 6.8 61 220-283 45-105 (125)
94 2cs5_A Tyrosine-protein phosph 98.9 2.4E-09 8.2E-14 87.5 7.0 61 221-284 42-107 (119)
95 1mfg_A ERB-B2 interacting prot 98.9 6.7E-09 2.3E-13 81.4 9.2 75 87-173 12-92 (95)
96 3ney_A 55 kDa erythrocyte memb 98.9 9.1E-10 3.1E-14 99.1 4.6 86 3-95 87-172 (197)
97 3qe1_A Sorting nexin-27, G pro 98.9 3.6E-09 1.2E-13 84.7 7.6 61 221-285 44-104 (107)
98 1mfg_A ERB-B2 interacting prot 98.9 4.6E-09 1.6E-13 82.3 8.1 59 220-283 35-93 (95)
99 1x6d_A Interleukin-16; PDZ dom 98.9 2.5E-09 8.6E-14 87.4 6.8 66 220-288 42-108 (119)
100 3b76_A E3 ubiquitin-protein li 98.9 2.3E-09 8E-14 88.5 6.5 76 87-174 35-113 (118)
101 3i4w_A Disks large homolog 4; 98.9 2.4E-09 8.3E-14 85.0 6.3 60 221-283 36-95 (104)
102 2koj_A Partitioning defective 98.9 4.8E-09 1.7E-13 84.4 8.1 63 220-285 39-103 (111)
103 2ego_A General receptor for ph 98.9 4E-09 1.4E-13 83.0 7.4 59 220-282 37-95 (96)
104 1wi2_A Riken cDNA 2700099C19; 98.9 3.4E-09 1.2E-13 84.8 7.0 63 220-287 41-103 (104)
105 1m5z_A GRIP, AMPA receptor int 98.9 4.2E-09 1.4E-13 81.7 7.3 59 220-282 32-90 (91)
106 2kv8_A RGS12, regulator of G-p 98.9 2.7E-09 9.1E-14 81.6 6.0 60 220-283 23-82 (83)
107 2v90_A PDZ domain-containing p 98.9 4.4E-09 1.5E-13 82.6 7.4 62 220-285 30-91 (96)
108 2ejy_A 55 kDa erythrocyte memb 98.9 2.7E-09 9.2E-14 85.5 6.1 60 220-282 36-95 (97)
109 2r4h_A Membrane-associated gua 98.9 4.5E-09 1.5E-13 85.3 7.4 61 220-283 49-109 (112)
110 3l4f_D SH3 and multiple ankyri 98.9 6.4E-09 2.2E-13 87.3 8.5 62 220-285 65-126 (132)
111 1i16_A Interleukin 16, LCF; cy 98.9 5E-09 1.7E-13 87.4 7.7 76 87-174 39-118 (130)
112 1n7t_A 99-MER peptide of densi 98.9 4.3E-09 1.5E-13 83.8 6.9 60 220-284 43-102 (103)
113 3soe_A Membrane-associated gua 98.8 8.5E-09 2.9E-13 85.3 8.8 60 221-286 35-96 (113)
114 1wfv_A Membrane associated gua 98.8 2.5E-09 8.4E-14 84.8 5.4 62 221-285 37-98 (103)
115 2he4_A Na(+)/H(+) exchange reg 98.8 5.1E-09 1.7E-13 81.2 6.9 61 220-284 28-88 (90)
116 2pa1_A PDZ and LIM domain prot 98.8 8.3E-09 2.8E-13 79.5 7.7 60 220-283 26-85 (87)
117 2fcf_A Multiple PDZ domain pro 98.8 6.4E-09 2.2E-13 82.5 7.3 62 220-284 39-100 (103)
118 2f5y_A Regulator of G-protein 98.8 5.4E-09 1.9E-13 81.5 6.7 62 220-285 24-85 (91)
119 2awx_A Synapse associated prot 98.8 3.8E-09 1.3E-13 84.5 6.0 78 87-174 13-93 (105)
120 3pv2_A DEGQ; trypsin fold, PDZ 98.8 5.1E-09 1.7E-13 104.7 8.2 157 108-284 282-444 (451)
121 1uhp_A Hypothetical protein KI 98.8 8.1E-09 2.8E-13 82.8 7.6 80 87-175 18-102 (107)
122 2e7k_A Maguk P55 subfamily mem 98.8 5.9E-09 2E-13 81.7 6.6 60 220-283 29-88 (91)
123 1z87_A Alpha-1-syntrophin; pro 98.8 1.3E-08 4.5E-13 95.5 10.1 62 220-284 103-164 (263)
124 1va8_A Maguk P55 subfamily mem 98.8 8.5E-09 2.9E-13 83.8 7.6 63 220-285 48-110 (113)
125 2pkt_A PDZ and LIM domain prot 98.8 1E-08 3.6E-13 79.6 7.8 62 220-285 27-88 (91)
126 1rgw_A ZAsp protein; PDZ, cyph 98.8 6.6E-09 2.3E-13 79.5 6.5 60 220-283 25-84 (85)
127 2ehr_A INAD-like protein; PDZ 98.8 1.1E-08 3.9E-13 83.2 8.2 80 87-175 26-111 (117)
128 2eno_A Synaptojanin-2-binding 98.8 1.2E-08 4E-13 83.6 8.2 81 87-177 27-110 (120)
129 1v5q_A GRIP1 homolog, glutamat 98.8 1.2E-08 4.1E-13 84.0 8.3 63 220-285 45-109 (122)
130 2edv_A FERM and PDZ domain-con 98.8 8.1E-09 2.8E-13 81.6 6.9 59 220-283 31-89 (96)
131 2fe5_A Presynaptic protein SAP 98.8 6.5E-09 2.2E-13 81.0 6.1 76 87-172 13-91 (94)
132 1ujd_A KIAA0559 protein; PDZ d 98.8 3.2E-09 1.1E-13 86.9 4.4 77 87-173 29-108 (117)
133 1n7t_A 99-MER peptide of densi 98.8 1.2E-08 4E-13 81.2 7.6 75 87-173 20-100 (103)
134 1g9o_A NHE-RF; PDZ domain, com 98.8 1.4E-08 4.8E-13 78.8 7.7 59 220-282 27-85 (91)
135 2dls_A PDZ-rhogef, RHO guanine 98.8 1.9E-08 6.7E-13 78.7 8.5 62 220-286 29-90 (93)
136 2iwq_A Multiple PDZ domain pro 98.8 1.1E-08 3.6E-13 85.0 7.3 62 220-284 59-120 (123)
137 1y7n_A Amyloid beta A4 precurs 98.8 8.1E-09 2.8E-13 81.2 6.1 64 213-281 25-88 (90)
138 2vsp_A PDZ domain-containing p 98.8 5.2E-09 1.8E-13 81.5 4.9 61 220-284 27-87 (91)
139 2d90_A PDZ domain containing p 98.8 1.9E-08 6.5E-13 79.9 8.2 61 220-284 30-90 (102)
140 2eeh_A PDZ domain-containing p 98.8 1.6E-08 5.5E-13 80.1 7.7 63 220-287 36-98 (100)
141 2kom_A Partitioning defective 98.8 1.2E-08 4.2E-13 84.1 7.2 61 220-283 58-120 (121)
142 2eeg_A PDZ and LIM domain prot 98.8 1.2E-08 4.2E-13 79.9 6.8 61 220-284 32-92 (94)
143 1wif_A RSGI RUH-020, riken cDN 98.8 1.2E-08 4.2E-13 85.6 7.2 60 220-282 49-110 (126)
144 2qbw_A PDZ-fibronectin fusion 98.8 1.9E-08 6.6E-13 88.1 8.8 75 88-174 2-82 (195)
145 1vb7_A PDZ and LIM domain 2; P 98.8 1E-08 3.5E-13 80.3 6.3 63 220-286 30-92 (94)
146 2csj_A TJP2 protein; PDZ domai 98.8 8.2E-09 2.8E-13 84.2 5.8 60 220-284 46-105 (117)
147 2iwn_A Multiple PDZ domain pro 98.8 1.1E-08 3.9E-13 79.6 6.4 61 220-283 33-93 (97)
148 1wf7_A Enigma homologue protei 98.8 1.1E-08 3.8E-13 81.5 6.4 61 221-285 30-90 (103)
149 1x5q_A LAP4 protein; PDZ domai 98.7 1.8E-08 6.2E-13 81.0 7.6 63 220-286 46-108 (110)
150 1whd_A RGS3, regulator of G-pr 98.7 7.9E-09 2.7E-13 82.1 5.3 64 220-287 36-99 (100)
151 3r68_A Na(+)/H(+) exchange reg 98.7 8.7E-09 3E-13 80.4 5.4 60 221-284 30-89 (95)
152 1wfg_A Regulating synaptic mem 98.7 9.3E-09 3.2E-13 86.1 5.7 78 85-174 45-127 (131)
153 2w4f_A Protein LAP4; structura 98.7 2.4E-08 8.1E-13 78.2 7.6 62 220-285 34-95 (97)
154 2jik_A Synaptojanin-2 binding 98.7 1.9E-08 6.4E-13 79.6 6.9 78 87-174 17-97 (101)
155 2yuy_A RHO GTPase activating p 98.7 3.9E-09 1.3E-13 87.4 3.0 62 220-285 61-122 (126)
156 1q3o_A Shank1; PDZ, GKAP, pept 98.7 2.1E-08 7.1E-13 80.7 7.2 63 220-286 45-107 (109)
157 2edp_A Fragment, shroom family 98.7 9.4E-09 3.2E-13 81.7 5.0 61 220-284 35-95 (100)
158 2iwo_A Multiple PDZ domain pro 98.7 4.8E-09 1.6E-13 86.6 3.3 75 87-173 35-112 (120)
159 1ihj_A INAD; intermolecular di 98.7 9.4E-09 3.2E-13 80.8 4.8 78 86-172 15-95 (98)
160 3khf_A Microtubule-associated 98.7 2.6E-08 8.8E-13 78.5 7.3 60 221-284 35-94 (99)
161 3ngh_A PDZ domain-containing p 98.7 1.5E-08 5.3E-13 80.8 6.1 60 220-283 26-85 (106)
162 1wg6_A Hypothetical protein (r 98.7 7.4E-09 2.5E-13 86.2 4.3 78 86-174 35-122 (127)
163 2db5_A INAD-like protein; PDZ 98.7 1.4E-08 4.7E-13 84.1 5.9 76 87-174 36-115 (128)
164 1wf8_A Neurabin-I; PDZ domain, 98.7 1.5E-08 5.1E-13 81.2 6.0 77 87-175 19-101 (107)
165 3gsl_A Disks large homolog 4; 98.7 2.2E-08 7.6E-13 86.9 7.4 63 220-285 35-97 (196)
166 2edz_A PDZ domain-containing p 98.7 2.3E-08 7.8E-13 81.2 6.9 60 220-283 38-97 (114)
167 3egg_C Spinophilin; PP1, serin 98.7 1.6E-08 5.6E-13 88.7 6.4 76 87-172 90-169 (170)
168 2w4f_A Protein LAP4; structura 98.7 1.6E-08 5.4E-13 79.2 5.7 77 87-173 13-92 (97)
169 2eei_A PDZ domain-containing p 98.7 1.8E-08 6E-13 80.4 6.1 61 220-284 32-92 (106)
170 2qbw_A PDZ-fibronectin fusion 98.7 3.6E-08 1.2E-12 86.4 8.4 57 220-281 24-80 (195)
171 1ujv_A Membrane associated gua 98.7 6.4E-08 2.2E-12 76.6 9.0 59 221-285 33-93 (96)
172 2fne_A Multiple PDZ domain pro 98.7 8.2E-09 2.8E-13 84.8 3.8 75 87-173 35-112 (117)
173 1tp5_A Presynaptic density pro 98.7 2.5E-08 8.6E-13 81.3 6.6 61 220-283 38-98 (119)
174 3r0h_A INAD, inactivation-NO-a 98.7 2.8E-08 9.4E-13 87.7 7.2 63 220-285 45-110 (206)
175 1um7_A Synapse-associated prot 98.7 1.9E-08 6.6E-13 80.9 5.6 61 220-283 39-99 (113)
176 3k1r_A Harmonin; protein-prote 98.7 2.6E-08 8.8E-13 88.2 6.6 60 220-284 110-169 (192)
177 2d92_A INAD-like protein; PDZ 98.7 1.6E-08 5.6E-13 81.4 4.8 76 87-173 25-104 (108)
178 3cbz_A Dishevelled-2; PDZ doma 98.7 2.1E-08 7.2E-13 80.9 5.4 75 87-174 16-96 (108)
179 3axa_A Afadin, nectin-3, prote 98.7 1.8E-08 6.1E-13 80.5 4.8 77 85-173 18-97 (106)
180 2gzv_A PRKCA-binding protein; 98.7 3.7E-08 1.3E-12 80.5 6.8 59 221-282 51-109 (114)
181 2z17_A Pleckstrin homology SEC 98.7 1.5E-08 5.1E-13 80.8 4.3 56 220-279 48-103 (104)
182 3tsv_A Tight junction protein 98.6 3.7E-08 1.3E-12 81.8 6.6 60 220-283 51-112 (124)
183 2jxo_A Ezrin-radixin-moesin-bi 98.6 3E-08 1E-12 78.0 5.8 59 221-283 34-93 (98)
184 1uit_A Human discs large 5 pro 98.6 5.8E-08 2E-12 79.0 7.5 63 220-286 42-104 (117)
185 1ky9_A Protease DO, DEGP, HTRA 98.6 1.3E-08 4.4E-13 101.7 4.1 149 107-284 285-441 (448)
186 3sfj_A TAX1-binding protein 3; 98.6 5.1E-08 1.7E-12 77.4 6.7 59 220-282 45-104 (104)
187 2jil_A GRIP1 protein, glutamat 98.6 3E-08 1E-12 77.7 5.4 77 87-174 13-92 (97)
188 1v5l_A PDZ and LIM domain 3; a 98.6 3.1E-08 1.1E-12 79.0 5.5 61 220-284 29-89 (103)
189 1q7x_A PDZ2B domain of PTP-BAS 98.6 3.9E-08 1.4E-12 78.8 6.1 76 87-174 19-102 (108)
190 2h2b_A Tight junction protein 98.6 1.2E-07 4.1E-12 75.7 8.9 61 220-285 39-99 (107)
191 2jre_A C60-1 PDZ domain peptid 98.6 3.6E-08 1.2E-12 78.9 5.6 78 86-173 23-103 (108)
192 2vz5_A TAX1-binding protein 3; 98.6 5.4E-08 1.8E-12 82.4 6.9 63 220-286 64-127 (139)
193 1um1_A KIAA1849 protein, RSGI 98.6 4.5E-08 1.5E-12 78.7 6.0 75 87-173 18-95 (110)
194 1d5g_A Human phosphatase HPTP1 98.6 5.3E-08 1.8E-12 76.2 6.1 75 87-173 15-92 (96)
195 1x5q_A LAP4 protein; PDZ domai 98.6 5.4E-08 1.8E-12 78.2 6.2 77 87-173 25-104 (110)
196 2vsv_A Rhophilin-2; scaffold p 98.6 9E-08 3.1E-12 78.1 7.4 62 220-285 44-106 (109)
197 2lob_A Golgi-associated PDZ an 98.0 5.9E-09 2E-13 85.2 0.0 58 220-280 53-110 (112)
198 2d8i_A T-cell lymphoma invasio 98.6 7.5E-08 2.6E-12 79.2 6.6 60 220-285 44-103 (114)
199 2g5m_B Neurabin-2; spinophilin 98.6 4.8E-08 1.6E-12 78.9 5.2 76 87-174 14-95 (113)
200 1uez_A KIAA1526 protein; PDZ d 98.6 5.3E-08 1.8E-12 77.1 5.3 62 220-286 35-96 (101)
201 1wi4_A Synip, syntaxin binding 98.6 5.1E-08 1.8E-12 79.0 5.3 74 87-173 24-104 (109)
202 2dmz_A INAD-like protein; PDZ 98.6 5.3E-08 1.8E-12 80.5 5.4 79 86-174 25-106 (129)
203 1uju_A Scribble; PDZ domain, c 98.6 2.2E-08 7.6E-13 80.8 2.8 78 86-173 19-103 (111)
204 1qav_A Alpha-1 syntrophin (res 98.6 5.4E-08 1.8E-12 75.4 4.7 74 86-174 14-90 (90)
205 3l4f_D SH3 and multiple ankyri 98.6 1.1E-07 3.8E-12 79.7 7.0 78 86-173 37-123 (132)
206 3bpu_A Membrane-associated gua 98.6 2.1E-07 7E-12 71.7 8.0 58 220-283 27-86 (88)
207 2qt5_A Glutamate receptor-inte 98.5 1.2E-07 4E-12 83.7 7.4 63 220-285 33-95 (200)
208 2vwr_A Ligand of NUMB protein 98.5 1.2E-07 4.1E-12 74.1 5.9 72 87-174 15-89 (95)
209 1p1d_A PDZ45, glutamate recept 98.5 1.7E-07 5.7E-12 82.6 7.4 63 220-285 36-100 (196)
210 1x5n_A Harmonin; PDZ domain, u 98.5 2E-07 6.9E-12 75.3 7.1 58 220-282 41-98 (114)
211 1qau_A Neuronal nitric oxide s 98.5 2.1E-07 7.2E-12 74.8 7.2 63 220-285 26-89 (112)
212 1uep_A Membrane associated gua 98.5 2.5E-07 8.6E-12 73.6 7.5 74 87-175 19-97 (103)
213 2o2t_A Multiple PDZ domain pro 98.5 4.4E-08 1.5E-12 79.6 2.9 75 87-173 31-109 (117)
214 3shw_A Tight junction protein 98.5 1.6E-07 5.4E-12 94.7 7.3 60 220-283 23-84 (468)
215 2eaq_A LIM domain only protein 98.5 2.2E-07 7.4E-12 71.8 6.3 60 220-283 28-89 (90)
216 3sfj_A TAX1-binding protein 3; 98.5 1.6E-07 5.4E-12 74.5 5.7 77 87-173 18-104 (104)
217 1uf1_A KIAA1526 protein; PDZ d 98.5 2.1E-07 7.3E-12 76.9 6.7 62 220-286 46-107 (128)
218 1uew_A Membrane associated gua 98.5 4.3E-07 1.5E-11 73.6 8.3 79 86-174 20-103 (114)
219 2dc2_A GOPC, golgi associated 98.5 1.2E-07 4.1E-12 75.7 4.6 73 86-173 19-94 (103)
220 2qg1_A Multiple PDZ domain pro 98.4 1.8E-07 6.1E-12 72.6 5.2 72 87-174 15-89 (92)
221 1ufx_A KIAA1526 protein; PDZ d 98.4 1.3E-07 4.5E-12 75.9 4.4 76 84-173 13-96 (103)
222 2daz_A INAD-like protein; PDZ 98.4 2.1E-07 7.3E-12 76.6 5.7 74 87-174 35-111 (124)
223 1z87_A Alpha-1-syntrophin; pro 98.4 1.1E-07 3.9E-12 89.1 4.5 75 87-176 88-165 (263)
224 2q9v_A Membrane-associated gua 98.4 1.9E-07 6.7E-12 72.1 5.0 73 87-174 12-89 (90)
225 2kjd_A Sodium/hydrogen exchang 98.4 2.6E-07 9E-12 76.0 6.0 59 221-283 34-93 (128)
226 4e34_A Golgi-associated PDZ an 98.4 2.5E-07 8.5E-12 71.0 4.8 72 86-172 12-86 (87)
227 1ueq_A Membrane associated gua 98.4 4.8E-07 1.6E-11 74.5 6.7 74 87-175 29-107 (123)
228 1vae_A Rhophilin 2, rhophilin, 98.4 3.2E-07 1.1E-11 74.8 5.5 63 220-286 36-99 (111)
229 3kzd_A TIAM-1, T-lymphoma inva 98.4 5.4E-07 1.9E-11 72.0 6.6 56 220-281 35-90 (94)
230 1v6b_A Harmonin isoform A1; st 98.4 3.2E-07 1.1E-11 75.2 5.3 72 88-173 28-106 (118)
231 3hpk_A Protein interacting wit 98.4 4.7E-07 1.6E-11 74.5 6.2 74 86-174 29-105 (125)
232 3tsz_A Tight junction protein 98.4 4.1E-07 1.4E-11 89.5 6.8 60 220-283 31-92 (391)
233 1wh1_A KIAA1095 protein; PDZ d 98.4 6.8E-07 2.3E-11 73.6 7.0 61 220-285 48-109 (124)
234 1q3o_A Shank1; PDZ, GKAP, pept 98.4 8.3E-07 2.8E-11 71.2 7.3 79 86-174 17-104 (109)
235 1b8q_A Protein (neuronal nitri 98.4 3.9E-07 1.3E-11 75.1 5.4 62 220-284 33-95 (127)
236 3o46_A Maguk P55 subfamily mem 98.4 4.1E-07 1.4E-11 70.9 5.1 71 87-173 14-87 (93)
237 2r4h_A Membrane-associated gua 98.3 5E-07 1.7E-11 73.1 5.5 72 87-173 34-108 (112)
238 2opg_A Multiple PDZ domain pro 98.3 6.8E-07 2.3E-11 70.0 6.1 73 87-173 14-89 (98)
239 2yt7_A Amyloid beta A4 precurs 98.3 1.1E-06 3.8E-11 69.7 7.3 75 86-173 19-98 (101)
240 3i4w_A Disks large homolog 4; 98.3 5.2E-07 1.8E-11 71.3 5.3 71 87-173 21-94 (104)
241 1x6d_A Interleukin-16; PDZ dom 98.3 8.3E-07 2.8E-11 72.3 6.6 75 86-174 25-103 (119)
242 1rgw_A ZAsp protein; PDZ, cyph 98.3 4.8E-07 1.7E-11 68.9 4.8 70 87-172 10-82 (85)
243 2i04_A Membrane-associated gua 98.3 6.2E-07 2.1E-11 68.5 5.4 71 87-172 10-85 (85)
244 1v62_A KIAA1719 protein; struc 98.3 5.3E-07 1.8E-11 73.6 5.2 75 86-174 25-102 (117)
245 1nf3_C PAR-6B; semi-CRIB motif 98.3 1.8E-07 6.3E-12 77.6 2.4 77 87-172 41-123 (128)
246 2iwn_A Multiple PDZ domain pro 98.3 7.6E-07 2.6E-11 69.1 5.8 77 87-174 14-93 (97)
247 2pa1_A PDZ and LIM domain prot 98.3 6.8E-07 2.3E-11 68.6 5.4 72 86-173 10-84 (87)
248 2q3g_A PDZ and LIM domain prot 98.3 7.3E-07 2.5E-11 68.7 5.6 72 86-173 11-85 (89)
249 2kpk_A Membrane-associated gua 98.3 5.4E-07 1.9E-11 74.8 4.9 73 87-174 28-105 (129)
250 2cs5_A Tyrosine-protein phosph 98.3 7.1E-07 2.4E-11 72.7 5.5 71 88-173 27-105 (119)
251 3gge_A PDZ domain-containing p 98.3 1E-06 3.6E-11 70.7 6.3 70 87-173 15-89 (95)
252 2la8_A Inactivation-NO-after-p 98.3 8.4E-07 2.9E-11 71.6 5.7 72 85-174 11-85 (106)
253 2dkr_A LIN-7 homolog B; LIN-7B 98.3 6.5E-07 2.2E-11 69.4 4.8 71 87-172 15-88 (93)
254 2koj_A Partitioning defective 98.3 1.1E-06 3.6E-11 70.6 6.2 75 87-173 21-100 (111)
255 3qe1_A Sorting nexin-27, G pro 98.3 1.2E-06 4.2E-11 69.7 6.4 78 87-174 16-102 (107)
256 2pkt_A PDZ and LIM domain prot 98.3 1.1E-06 3.7E-11 68.1 5.8 72 86-173 11-85 (91)
257 3a00_A Guanylate kinase, GMP k 98.3 2.9E-07 9.9E-12 79.9 2.8 79 7-85 73-153 (186)
258 2he4_A Na(+)/H(+) exchange reg 98.3 9E-07 3.1E-11 68.4 5.3 70 87-173 14-86 (90)
259 2yub_A LIMK-2, LIM domain kina 98.3 1.8E-06 6.1E-11 71.1 7.3 64 220-287 44-109 (118)
260 2dlu_A INAD-like protein; PDZ 98.3 1.2E-06 4.1E-11 70.3 6.2 71 87-174 25-98 (111)
261 1n7e_A AMPA receptor interacti 98.3 1.5E-06 5E-11 68.2 6.3 75 85-174 13-90 (97)
262 2qkv_A Inactivation-NO-after-p 98.2 1E-06 3.4E-11 69.3 5.1 71 86-174 18-91 (96)
263 2iwq_A Multiple PDZ domain pro 98.2 1.1E-06 3.6E-11 72.8 5.4 79 87-174 35-119 (123)
264 3nfk_A Tyrosine-protein phosph 98.2 8.6E-07 2.9E-11 70.6 4.5 71 87-172 28-106 (107)
265 2djt_A Unnamed protein product 98.2 6.2E-07 2.1E-11 71.1 3.4 74 87-173 21-97 (104)
266 1v5q_A GRIP1 homolog, glutamat 98.2 2.4E-06 8E-11 70.2 7.0 78 87-175 26-108 (122)
267 1m5z_A GRIP, AMPA receptor int 98.2 1.5E-06 5.1E-11 67.1 5.4 68 88-172 19-89 (91)
268 1g9o_A NHE-RF; PDZ domain, com 98.2 2.1E-06 7.1E-11 66.3 5.8 71 86-173 12-85 (91)
269 2uzc_A Human pdlim5, PDZ and L 98.2 1.3E-06 4.3E-11 67.1 4.5 73 85-173 10-85 (88)
270 2fcf_A Multiple PDZ domain pro 98.2 1.3E-06 4.5E-11 68.9 4.7 78 88-174 16-99 (103)
271 3e17_A Tight junction protein 98.2 1.4E-06 4.9E-11 67.5 4.5 67 87-174 12-81 (88)
272 1kwa_A Hcask/LIN-2 protein; PD 98.1 1.7E-06 5.8E-11 67.1 4.4 71 85-172 10-83 (88)
273 1wfv_A Membrane associated gua 98.1 7.2E-07 2.4E-11 70.4 2.3 72 88-174 22-96 (103)
274 2kom_A Partitioning defective 98.1 2.9E-06 9.8E-11 69.7 5.9 74 87-172 40-118 (121)
275 2krg_A Na(+)/H(+) exchange reg 98.1 8.3E-07 2.9E-11 80.7 2.8 59 221-283 34-93 (216)
276 2dm8_A INAD-like protein; PDZ 98.1 1.8E-06 6.1E-11 69.7 4.4 74 87-174 27-103 (116)
277 2vz5_A TAX1-binding protein 3; 98.1 2.6E-06 9E-11 71.9 5.4 76 88-173 38-123 (139)
278 1wi2_A Riken cDNA 2700099C19; 98.1 3.2E-06 1.1E-10 67.3 5.4 70 87-173 26-98 (104)
279 2kjp_A Uncharacterized protein 98.1 2E-06 6.8E-11 67.6 4.1 57 221-284 2-60 (91)
280 2eeg_A PDZ and LIM domain prot 98.1 2.8E-06 9.7E-11 66.2 5.0 71 86-172 16-89 (94)
281 3soe_A Membrane-associated gua 98.1 5.7E-06 2E-10 68.2 7.1 67 87-174 22-93 (113)
282 2ego_A General receptor for ph 98.1 2.7E-06 9.1E-11 66.7 4.8 76 87-172 15-94 (96)
283 1tp5_A Presynaptic density pro 98.1 2.8E-06 9.5E-11 69.0 5.0 72 87-174 24-98 (119)
284 3suz_A Amyloid beta A4 precurs 98.1 1.1E-06 3.6E-11 86.2 2.8 62 221-285 233-296 (388)
285 1vb7_A PDZ and LIM domain 2; P 98.1 1.7E-06 5.8E-11 67.6 3.3 73 85-173 13-88 (94)
286 2lob_A Golgi-associated PDZ an 97.4 4.6E-07 1.6E-11 73.9 0.0 72 85-171 36-110 (112)
287 2v90_A PDZ domain-containing p 98.1 2.9E-06 1E-10 66.2 4.6 73 87-173 13-88 (96)
288 1w9e_A Syntenin 1; cell adhesi 98.1 7.8E-06 2.7E-10 70.1 7.6 59 220-282 27-86 (166)
289 1r6j_A Syntenin 1; PDZ, membra 98.1 3.3E-06 1.1E-10 65.7 4.5 62 87-171 15-79 (82)
290 2kl1_A YLBL protein; structure 98.1 6E-06 2E-10 64.9 6.0 58 220-284 5-64 (94)
291 2edp_A Fragment, shroom family 98.0 2E-06 6.7E-11 68.1 3.1 72 87-173 20-93 (100)
292 3khf_A Microtubule-associated 98.0 4.3E-06 1.5E-10 65.6 4.9 80 83-172 8-91 (99)
293 1wf7_A Enigma homologue protei 98.0 2E-06 6.7E-11 68.3 2.9 72 86-173 13-87 (103)
294 3qik_A Phosphatidylinositol 3, 98.0 8.3E-06 2.8E-10 66.1 6.6 58 220-281 39-99 (101)
295 2edv_A FERM and PDZ domain-con 98.0 4.4E-06 1.5E-10 65.7 4.8 66 88-174 21-89 (96)
296 3k1r_A Harmonin; protein-prote 98.0 2.8E-06 9.4E-11 75.0 3.9 70 87-173 95-167 (192)
297 3tau_A Guanylate kinase, GMP k 98.0 1.2E-06 4.1E-11 77.6 1.6 80 6-85 79-159 (208)
298 3r68_A Na(+)/H(+) exchange reg 98.0 4.9E-06 1.7E-10 64.6 4.5 71 86-173 14-87 (95)
299 2kv8_A RGS12, regulator of G-p 98.0 6.7E-06 2.3E-10 62.4 4.9 66 87-172 12-80 (83)
300 2ejy_A 55 kDa erythrocyte memb 98.0 5.9E-06 2E-10 65.9 4.6 72 84-172 20-94 (97)
301 3bpu_A Membrane-associated gua 98.0 1.8E-05 6.3E-10 60.6 7.3 68 87-173 13-85 (88)
302 1um7_A Synapse-associated prot 97.9 3.4E-06 1.2E-10 67.6 2.8 71 87-173 25-98 (113)
303 2e7k_A Maguk P55 subfamily mem 97.9 4.8E-06 1.6E-10 65.0 3.6 70 85-172 15-86 (91)
304 3ngh_A PDZ domain-containing p 97.9 9.4E-06 3.2E-10 64.4 5.2 71 86-173 11-84 (106)
305 2f5y_A Regulator of G-protein 97.9 1.4E-05 4.8E-10 61.9 5.9 69 87-175 13-84 (91)
306 2yuy_A RHO GTPase activating p 97.9 2.7E-06 9.4E-11 70.1 2.0 58 106-173 59-119 (126)
307 2d90_A PDZ domain containing p 97.9 1.5E-05 5.2E-10 62.9 6.2 71 86-173 15-88 (102)
308 1wif_A RSGI RUH-020, riken cDN 97.9 2.3E-06 8E-11 71.6 1.3 70 86-173 36-110 (126)
309 1v5l_A PDZ and LIM domain 3; a 97.9 3.4E-06 1.2E-10 67.0 2.0 75 84-174 11-88 (103)
310 1va8_A Maguk P55 subfamily mem 97.9 1E-05 3.4E-10 65.5 4.8 67 87-172 36-106 (113)
311 2vsp_A PDZ domain-containing p 97.9 4.7E-06 1.6E-10 64.5 2.7 70 87-173 13-85 (91)
312 1x5n_A Harmonin; PDZ domain, u 97.9 3.1E-05 1.1E-09 62.3 7.6 73 84-173 23-98 (114)
313 2dls_A PDZ-rhogef, RHO guanine 97.9 4.5E-05 1.5E-09 59.3 7.8 67 86-173 17-86 (93)
314 2gzv_A PRKCA-binding protein; 97.8 1.4E-05 4.7E-10 65.1 4.9 71 87-172 35-108 (114)
315 2eei_A PDZ domain-containing p 97.8 7.5E-06 2.6E-10 65.0 3.1 71 86-173 17-90 (106)
316 2pzd_A Serine protease HTRA2; 97.8 3.3E-05 1.1E-09 62.0 6.8 57 220-283 35-91 (113)
317 2edz_A PDZ domain-containing p 97.8 3.4E-05 1.2E-09 62.2 6.7 68 89-173 26-96 (114)
318 1uez_A KIAA1526 protein; PDZ d 97.8 1.7E-05 5.7E-10 62.5 4.6 70 87-173 20-92 (101)
319 3tsv_A Tight junction protein 97.8 2E-05 7E-10 65.1 5.3 71 85-173 36-111 (124)
320 3i18_A LMO2051 protein; alpha- 97.8 6.2E-05 2.1E-09 59.5 7.5 58 220-284 7-66 (100)
321 1wh1_A KIAA1095 protein; PDZ d 97.8 2.2E-05 7.7E-10 64.4 4.9 74 88-174 32-107 (124)
322 2jxo_A Ezrin-radixin-moesin-bi 97.7 1.9E-05 6.4E-10 61.8 3.7 69 87-172 19-91 (98)
323 1kgd_A CASK, peripheral plasma 97.7 1.4E-05 4.7E-10 69.0 3.1 55 9-63 79-133 (180)
324 2d8i_A T-cell lymphoma invasio 97.7 4.1E-05 1.4E-09 62.7 5.6 69 89-174 30-101 (114)
325 2l97_A HTRA, putative serine p 97.7 7.3E-05 2.5E-09 62.4 7.3 58 220-284 57-116 (134)
326 2eeh_A PDZ domain-containing p 97.7 4.8E-05 1.6E-09 59.8 5.7 70 87-173 21-93 (100)
327 1uit_A Human discs large 5 pro 97.7 2.5E-05 8.7E-10 63.2 4.0 70 86-173 28-100 (117)
328 1ujv_A Membrane associated gua 97.7 8.8E-05 3E-09 58.3 6.6 66 87-173 20-90 (96)
329 3kzd_A TIAM-1, T-lymphoma inva 97.6 9.7E-05 3.3E-09 58.9 6.6 68 88-172 20-90 (94)
330 2qor_A Guanylate kinase; phosp 97.6 4.4E-05 1.5E-09 66.9 4.9 77 6-82 83-162 (204)
331 1whd_A RGS3, regulator of G-pr 97.6 3.5E-05 1.2E-09 60.8 3.8 67 88-174 26-95 (100)
332 2z17_A Pleckstrin homology SEC 97.6 5.1E-05 1.8E-09 60.1 4.1 74 87-170 26-103 (104)
333 2p3w_A Probable serine proteas 97.6 0.00012 4.3E-09 58.6 6.3 57 220-283 35-91 (112)
334 2zpm_A Regulator of sigma E pr 97.5 0.0001 3.4E-09 56.7 5.2 56 222-283 6-62 (91)
335 4fln_A Protease DO-like 2, chl 97.5 0.0016 5.6E-08 66.5 15.6 156 107-279 276-469 (539)
336 2eaq_A LIM domain only protein 97.5 0.00011 3.9E-09 56.3 4.7 66 89-173 18-88 (90)
337 3cyy_A Tight junction protein 97.5 0.00011 3.9E-09 56.2 4.7 56 108-172 23-81 (92)
338 1uf1_A KIAA1526 protein; PDZ d 97.4 0.00019 6.7E-09 58.9 6.1 69 88-173 32-103 (128)
339 1y7n_A Amyloid beta A4 precurs 97.4 0.00012 4.3E-09 57.0 4.6 63 87-172 23-88 (90)
340 1qau_A Neuronal nitric oxide s 97.4 0.00017 5.8E-09 57.6 5.3 70 87-173 12-86 (112)
341 2kjd_A Sodium/hydrogen exchang 97.4 0.0001 3.4E-09 60.3 4.0 69 87-172 19-91 (128)
342 2vsv_A Rhophilin-2; scaffold p 97.4 0.0002 6.7E-09 58.2 5.6 69 86-174 32-104 (109)
343 1s96_A Guanylate kinase, GMP k 97.4 0.00013 4.3E-09 65.9 4.8 77 10-86 92-169 (219)
344 2i6v_A General secretion pathw 97.4 0.00025 8.7E-09 54.4 5.9 57 221-283 20-78 (87)
345 2rcz_A Tight junction protein 97.4 0.00014 4.9E-09 54.1 4.2 65 87-172 12-79 (81)
346 1fc6_A Photosystem II D1 prote 97.4 0.00026 8.7E-09 68.9 7.0 61 220-284 99-160 (388)
347 2yub_A LIMK-2, LIM domain kina 97.3 0.00035 1.2E-08 57.3 6.3 71 88-173 29-104 (118)
348 2hga_A Conserved protein MTH13 97.3 0.00059 2E-08 56.6 7.5 57 220-284 25-83 (125)
349 4a8c_A Periplasmic PH-dependen 97.3 0.00028 9.6E-09 69.9 6.3 66 214-285 257-324 (436)
350 3id1_A Regulator of sigma E pr 97.3 0.00052 1.8E-08 53.8 6.4 56 223-284 5-62 (95)
351 1b8q_A Protein (neuronal nitri 97.3 0.00013 4.5E-09 59.7 3.0 69 88-173 20-93 (127)
352 1vae_A Rhophilin 2, rhophilin, 97.2 0.00032 1.1E-08 56.8 5.1 72 86-177 24-99 (111)
353 1te0_A Protease DEGS; two doma 97.2 0.00063 2.1E-08 64.3 7.8 65 214-284 238-304 (318)
354 3stj_A Protease DEGQ; serine p 97.2 0.00051 1.8E-08 66.1 6.5 65 214-284 257-323 (345)
355 2krg_A Na(+)/H(+) exchange reg 97.1 0.00014 4.7E-09 66.0 2.2 69 87-172 19-91 (216)
356 3rle_A Golgi reassembly-stacki 97.1 0.00061 2.1E-08 60.7 6.1 60 220-283 16-76 (209)
357 2kl1_A YLBL protein; structure 97.1 0.00071 2.4E-08 52.9 5.8 56 106-172 3-61 (94)
358 3tr0_A Guanylate kinase, GMP k 97.0 0.00043 1.5E-08 59.6 4.3 73 11-83 82-155 (205)
359 2i4s_A General secretion pathw 97.0 0.00094 3.2E-08 53.1 5.9 57 221-283 38-96 (105)
360 3pv2_A DEGQ; trypsin fold, PDZ 97.0 0.0005 1.7E-08 68.6 4.8 60 220-285 282-343 (451)
361 1lvg_A Guanylate kinase, GMP k 97.0 0.00047 1.6E-08 60.4 4.1 76 9-84 78-154 (198)
362 2kjp_A Uncharacterized protein 96.9 0.00043 1.5E-08 54.1 2.9 53 109-172 2-57 (91)
363 3i18_A LMO2051 protein; alpha- 96.8 0.0022 7.6E-08 50.4 6.3 56 106-172 5-63 (100)
364 2pzd_A Serine protease HTRA2; 96.7 0.0015 5.2E-08 52.1 4.9 59 103-172 30-89 (113)
365 1lcy_A HTRA2 serine protease; 96.7 0.002 6.8E-08 61.2 6.4 58 220-284 256-313 (325)
366 1y8t_A Hypothetical protein RV 96.7 0.0041 1.4E-07 58.7 8.4 59 220-284 242-303 (324)
367 3k50_A Putative S41 protease; 96.5 0.0012 4.2E-08 65.1 3.4 56 222-284 92-147 (403)
368 3qo6_A Protease DO-like 1, chl 96.4 0.0035 1.2E-07 60.0 5.7 60 220-285 251-323 (348)
369 1ky9_A Protease DO, DEGP, HTRA 96.4 0.0024 8.2E-08 63.5 4.7 64 215-284 281-346 (448)
370 2l97_A HTRA, putative serine p 96.3 0.0058 2E-07 50.7 6.1 55 107-172 56-113 (134)
371 2p3w_A Probable serine proteas 96.3 0.0046 1.6E-07 49.2 5.3 56 106-172 33-89 (112)
372 4fgm_A Aminopeptidase N family 96.1 0.0047 1.6E-07 63.8 5.0 60 220-284 496-555 (597)
373 3num_A Serine protease HTRA1; 96.0 0.001 3.6E-08 63.1 0.0 59 220-285 254-312 (332)
374 2hga_A Conserved protein MTH13 96.0 0.0066 2.3E-07 50.1 4.9 66 95-172 11-80 (125)
375 3qik_A Phosphatidylinositol 3, 95.7 0.011 3.7E-07 47.7 4.8 67 87-172 27-99 (101)
376 3lnc_A Guanylate kinase, GMP k 95.6 0.0029 9.9E-08 56.1 0.9 71 11-81 103-175 (231)
377 2zpm_A Regulator of sigma E pr 95.5 0.01 3.6E-07 45.1 3.6 55 108-172 4-60 (91)
378 2i6v_A General secretion pathw 95.3 0.015 5.1E-07 44.3 3.9 55 108-172 19-76 (87)
379 1lcy_A HTRA2 serine protease; 95.2 0.025 8.4E-07 53.6 6.0 60 102-172 250-310 (325)
380 3k50_A Putative S41 protease; 95.2 0.019 6.4E-07 56.6 5.3 72 87-173 73-145 (403)
381 4fln_A Protease DO-like 2, chl 95.1 0.022 7.7E-07 58.2 5.6 66 215-285 272-347 (539)
382 3id1_A Regulator of sigma E pr 94.9 0.023 7.8E-07 44.3 4.1 52 111-172 5-59 (95)
383 1k32_A Tricorn protease; prote 94.5 0.052 1.8E-06 58.0 6.9 61 220-283 748-815 (1045)
384 1fc6_A Photosystem II D1 prote 94.4 0.059 2E-06 52.2 6.4 69 88-172 85-157 (388)
385 2i4s_A General secretion pathw 94.3 0.045 1.5E-06 43.2 4.6 54 109-172 38-94 (105)
386 1te0_A Protease DEGS; two doma 94.3 0.051 1.8E-06 51.0 5.6 56 107-172 243-301 (318)
387 1z6g_A Guanylate kinase; struc 94.1 0.052 1.8E-06 48.0 5.1 75 11-85 99-176 (218)
388 1y8t_A Hypothetical protein RV 93.5 0.1 3.6E-06 48.9 6.2 67 89-172 230-299 (324)
389 2j41_A Guanylate kinase; GMP, 92.9 0.11 3.8E-06 44.2 4.9 55 13-67 84-139 (207)
390 3stj_A Protease DEGQ; serine p 92.7 0.067 2.3E-06 51.2 3.6 56 107-172 262-320 (345)
391 3num_A Serine protease HTRA1; 92.3 0.025 8.6E-07 53.5 0.0 57 106-173 252-309 (332)
392 4fgm_A Aminopeptidase N family 90.3 0.19 6.6E-06 51.7 4.2 54 108-172 496-552 (597)
393 3qo6_A Protease DO-like 1, chl 90.2 0.37 1.3E-05 45.8 5.8 73 88-172 233-319 (348)
394 3kfv_A Tight junction protein 83.3 0.46 1.6E-05 45.2 2.1 31 121-151 8-38 (308)
395 1k32_A Tricorn protease; prote 81.6 1.5 5.2E-05 46.7 5.6 64 107-172 747-813 (1045)
396 3tvt_A Disks large 1 tumor sup 80.8 0.75 2.6E-05 43.1 2.6 39 120-161 8-51 (292)
397 2a28_A BZZ1 protein; SH3 domai 76.7 1.7 5.9E-05 29.5 2.8 27 120-146 3-29 (54)
398 1g2b_A Spectrin alpha chain; c 75.0 2.9 9.8E-05 29.3 3.7 27 120-146 24-50 (62)
399 2bz8_A SH3-domain kinase bindi 73.8 2.5 8.6E-05 29.1 3.1 26 121-146 5-30 (58)
400 2gnc_A SLIT-ROBO RHO GTPase-ac 73.8 2.9 9.8E-05 29.1 3.4 27 121-147 10-36 (60)
401 1y0m_A 1-phosphatidylinositol- 73.4 2.6 9E-05 29.3 3.1 27 121-147 7-33 (61)
402 1k4u_S Phagocyte NADPH oxidase 73.2 3.1 0.00011 29.0 3.5 27 121-147 9-35 (62)
403 2drm_A Acanthamoeba myosin IB; 72.6 2.8 9.7E-05 28.7 3.1 27 121-147 7-33 (58)
404 1cka_A C-CRK N-terminal SH3 do 72.2 3 0.0001 28.6 3.1 26 121-146 5-30 (57)
405 1zx6_A YPR154WP; SH3 domain, p 72.1 3.3 0.00011 28.5 3.3 26 122-147 7-32 (58)
406 2g6f_X RHO guanine nucleotide 72.1 3.3 0.00011 28.6 3.3 27 121-147 8-34 (59)
407 1w1f_A Tyrosine-protein kinase 72.0 3.2 0.00011 29.1 3.3 28 121-148 11-38 (65)
408 1tg0_A BBC1 protein, myosin ta 71.8 3.2 0.00011 29.6 3.3 26 121-146 11-36 (68)
409 2xmf_A Myosin 1E SH3; motor pr 71.6 3.4 0.00012 28.7 3.3 28 120-147 8-35 (60)
410 4e6r_A Cytoplasmic protein NCK 71.6 3.4 0.00012 28.2 3.3 27 121-147 5-31 (58)
411 1yn8_A NBP2, NAP1-binding prot 71.6 3.5 0.00012 28.3 3.4 27 121-147 5-31 (59)
412 1w70_A Neutrophil cytosol fact 71.5 3.4 0.00012 28.7 3.3 28 120-147 7-34 (60)
413 1jo8_A ABP1P, actin binding pr 70.8 3.3 0.00011 28.5 3.1 25 121-145 4-28 (58)
414 1sem_A SEM-5; SRC-homology 3 ( 70.8 3.3 0.00011 28.4 3.1 26 121-146 6-31 (58)
415 2dmo_A Neutrophil cytosol fact 70.8 3.7 0.00013 29.3 3.5 27 121-147 11-37 (68)
416 1b07_A Protein (proto-oncogene 70.7 3.2 0.00011 29.6 3.1 26 121-146 7-32 (65)
417 1uti_A GRB2-related adaptor pr 70.1 3.5 0.00012 28.3 3.1 26 121-146 5-30 (58)
418 2ak5_A RHO guanine nucleotide 70.0 3.4 0.00012 28.9 3.1 26 121-146 10-35 (64)
419 2x3w_D Syndapin I, protein kin 69.9 3 0.0001 28.8 2.8 24 121-144 7-30 (60)
420 2lx7_A GAS-7, growth arrest-sp 69.9 2.8 9.6E-05 30.0 2.6 26 120-145 6-32 (60)
421 2d8j_A FYN-related kinase; SH3 69.7 2.8 9.4E-05 30.5 2.6 27 121-147 11-37 (77)
422 2nwm_A Vinexin; cell adhesion; 69.6 3.5 0.00012 29.5 3.1 26 121-146 5-30 (65)
423 2fpe_A C-JUN-amino-terminal ki 69.4 4 0.00014 28.4 3.3 25 121-145 7-31 (62)
424 2fei_A CD2-associated protein; 68.9 3 0.0001 29.8 2.6 26 121-146 5-30 (65)
425 2ydl_A SH3 domain-containing k 68.5 3.1 0.00011 30.1 2.7 27 121-147 6-32 (69)
426 2dl4_A Protein STAC; SH3 domai 68.5 3.9 0.00013 29.2 3.1 26 121-146 11-36 (68)
427 2ew3_A SH3-containing GRB2-lik 68.4 4.1 0.00014 29.3 3.3 26 121-146 7-32 (68)
428 2j6f_A CD2-associated protein; 68.3 4.2 0.00014 28.4 3.3 27 121-147 5-31 (62)
429 2l0a_A STAM-1, signal transduc 68.3 4.3 0.00015 29.8 3.4 26 121-146 21-46 (72)
430 1wyx_A CRK-associated substrat 68.2 3.3 0.00011 29.6 2.7 26 121-146 7-32 (69)
431 2jte_A CD2-associated protein; 68.1 3.4 0.00012 28.9 2.8 25 121-145 10-34 (64)
432 2ed1_A 130 kDa phosphatidylino 67.9 3.7 0.00013 30.0 3.0 26 120-145 13-38 (76)
433 1oot_A Hypothetical 40.4 kDa p 67.9 3.4 0.00012 28.6 2.7 26 121-146 7-32 (60)
434 2o9s_A Ponsin; SH3 domain, sig 67.6 4.5 0.00015 28.6 3.4 27 120-146 9-35 (67)
435 2kgt_A Tyrosine-protein kinase 67.5 3.5 0.00012 29.6 2.8 28 121-149 14-41 (72)
436 2vwf_A Growth factor receptor- 67.4 4.3 0.00015 27.7 3.1 26 121-146 6-31 (58)
437 3u23_A CD2-associated protein; 67.4 4.8 0.00016 28.0 3.4 27 120-146 10-36 (65)
438 1uj0_A Signal transducing adap 67.3 4.3 0.00015 28.4 3.1 26 121-146 9-34 (62)
439 2i0n_A Class VII unconventiona 67.3 3.8 0.00013 30.3 3.0 27 121-147 14-40 (80)
440 1zuy_A Myosin-5 isoform; SH3 d 67.2 4.8 0.00016 27.5 3.3 27 122-148 5-32 (58)
441 2lj0_A Sorbin and SH3 domain-c 67.1 4.9 0.00017 29.0 3.5 26 121-146 10-35 (65)
442 1zlm_A Osteoclast stimulating 66.8 4.6 0.00016 27.7 3.1 26 121-146 7-32 (58)
443 2dl8_A SLIT-ROBO RHO GTPase-ac 66.7 4.9 0.00017 29.0 3.4 27 121-147 13-39 (72)
444 1ue9_A Intersectin 2; beta bar 66.7 4.6 0.00016 29.6 3.3 27 121-147 11-37 (80)
445 2eqi_A Phospholipase C, gamma 66.5 3.4 0.00012 29.5 2.5 27 120-146 10-36 (69)
446 2oaw_A Spectrin alpha chain, b 66.4 4.6 0.00016 28.2 3.1 25 122-146 6-30 (65)
447 3c0c_A Endophilin-A2; endocyto 66.3 4.9 0.00017 29.1 3.3 28 120-147 16-43 (73)
448 2v1q_A SLA1, cytoskeleton asse 66.3 3.9 0.00013 28.2 2.7 26 121-146 6-31 (60)
449 1x2q_A Signal transducing adap 66.3 4.3 0.00015 30.6 3.1 27 120-146 20-46 (88)
450 2lcs_A NAP1-binding protein 2; 66.2 5.1 0.00017 29.3 3.4 28 120-147 8-35 (73)
451 3ulr_B SRC substrate cortactin 66.0 4.7 0.00016 28.2 3.1 26 121-146 13-38 (65)
452 4esr_A Jouberin; AHI-1, AHI1, 66.0 5 0.00017 28.5 3.3 27 120-146 9-35 (69)
453 2dl7_A KIAA0769 protein; SH3 d 65.7 3.9 0.00013 29.6 2.7 26 121-146 12-37 (73)
454 3eg3_A Proto-oncogene tyrosine 65.5 5.7 0.0002 27.5 3.5 26 121-146 9-34 (63)
455 1uhf_A Intersectin 2; beta bar 65.5 5.4 0.00018 28.6 3.4 27 121-147 12-38 (69)
456 1zuu_A BZZ1 protein; SH3 domai 65.4 4.2 0.00014 27.8 2.7 26 121-146 5-30 (58)
457 1x69_A Cortactin isoform A; SH 65.3 5.3 0.00018 29.4 3.4 28 120-147 20-47 (79)
458 2cuc_A SH3 domain containing r 65.2 5.7 0.0002 28.2 3.5 27 121-147 11-37 (70)
459 2djq_A SH3 domain containing r 65.2 4.8 0.00016 28.6 3.1 26 121-146 11-36 (68)
460 1x2k_A OSTF1, osteoclast stimu 65.0 4.8 0.00017 28.6 3.1 26 121-146 11-36 (68)
461 2dil_A Proline-serine-threonin 64.9 5.5 0.00019 28.3 3.4 27 121-147 12-38 (69)
462 2ed0_A ABL interactor 2; coile 64.8 5.3 0.00018 29.3 3.3 28 120-147 20-47 (78)
463 2yuo_A CIP85, RUN and TBC1 dom 64.8 4.9 0.00017 29.4 3.1 26 121-146 11-36 (78)
464 2ct3_A Vinexin; SH3 domian, st 64.7 4.7 0.00016 28.7 3.0 27 121-147 11-37 (70)
465 2iim_A Proto-oncogene tyrosine 64.6 4.3 0.00015 28.3 2.7 27 121-147 10-36 (62)
466 2dl3_A Sorbin and SH3 domain-c 64.3 5.2 0.00018 28.3 3.1 25 121-145 11-35 (68)
467 2k9g_A SH3 domain-containing k 64.1 4.4 0.00015 29.2 2.7 27 121-147 13-39 (73)
468 1x2p_A Protein arginine N-meth 63.8 5.4 0.00019 28.3 3.1 26 121-146 11-36 (68)
469 2dnu_A RUH-061, SH3 multiple d 63.8 5.4 0.00018 28.5 3.1 27 121-147 12-38 (71)
470 2j05_A RAS GTPase-activating p 63.7 6 0.0002 27.8 3.3 26 121-146 9-35 (65)
471 1csk_A C-SRC SH3 domain; phosp 63.4 4.6 0.00016 28.9 2.7 26 121-146 15-40 (71)
472 2k2m_A EPS8-like protein 1; al 63.4 4.9 0.00017 28.7 2.8 27 121-147 12-38 (68)
473 1gl5_A Tyrosine-protein kinase 63.3 5.6 0.00019 28.2 3.2 26 121-146 6-31 (67)
474 1j3t_A Intersectin 2; beta bar 63.3 5.3 0.00018 29.0 3.0 28 120-147 13-40 (74)
475 2ege_A Uncharacterized protein 63.2 4.4 0.00015 29.6 2.6 24 121-144 11-41 (75)
476 2bzy_A CRK-like protein, CRKL 63.1 5.1 0.00017 28.5 2.9 27 121-147 5-33 (67)
477 2b86_A Cytoplasmic protein NCK 63.0 4.8 0.00016 29.1 2.7 26 122-147 9-34 (67)
478 2jw4_A Cytoplasmic protein NCK 63.0 5 0.00017 29.0 2.9 26 121-146 11-36 (72)
479 2kxd_A 11-MER peptide, SH3 dom 63.0 6.7 0.00023 28.3 3.6 26 120-146 3-28 (73)
480 2cre_A HEF-like protein; SH3 d 62.9 3.8 0.00013 29.3 2.2 26 121-146 11-36 (71)
481 1x43_A Endophilin B1, SH3 doma 62.7 4.7 0.00016 29.8 2.7 28 120-147 20-47 (81)
482 2csi_A RIM-BP2, RIM binding pr 62.7 4.9 0.00017 29.4 2.8 25 120-144 10-41 (76)
483 1wi7_A SH3-domain kinase bindi 62.7 4.3 0.00015 28.8 2.4 27 121-147 11-37 (68)
484 2ysq_A RHO guanine nucleotide 62.7 5.8 0.0002 29.3 3.2 26 121-146 14-39 (81)
485 1ujy_A RHO guanine nucleotide 62.7 4.4 0.00015 29.5 2.5 26 121-146 14-39 (76)
486 1i07_A Epidermal growth factor 62.7 5 0.00017 27.7 2.7 25 122-146 6-30 (60)
487 2dbm_A SH3-containing GRB2-lik 62.6 4.6 0.00016 29.2 2.6 26 121-146 11-36 (73)
488 4f14_A Nebulette; SH3 domain, 62.6 6.5 0.00022 27.2 3.3 25 120-144 9-33 (64)
489 2eyx_A V-CRK sarcoma virus CT1 62.5 5.5 0.00019 28.3 3.0 28 120-147 9-38 (67)
490 2cub_A Cytoplasmic protein NCK 62.4 5.2 0.00018 30.2 2.9 28 121-148 21-48 (88)
491 2da9_A SH3-domain kinase bindi 62.3 4.3 0.00015 29.0 2.3 27 121-147 11-37 (70)
492 2fpf_A C-JUN-amino-terminal ki 62.2 6.5 0.00022 28.2 3.3 25 121-145 10-34 (71)
493 2yup_A Vinexin; sorbin and SH3 62.0 5.4 0.00018 30.1 3.0 26 120-145 20-45 (90)
494 2jt4_A Cytoskeleton assembly c 61.9 5.1 0.00017 28.6 2.7 25 121-145 10-34 (71)
495 1wxb_A Epidermal growth factor 61.8 5.5 0.00019 28.4 2.9 27 121-147 11-37 (68)
496 1wxt_A Hypothetical protein FL 61.8 5.2 0.00018 28.5 2.7 27 121-147 11-37 (68)
497 2ct4_A CDC42-interacting prote 61.7 5.1 0.00018 28.6 2.7 26 120-145 10-35 (70)
498 2dlp_A KIAA1783 protein; SH3 d 61.7 5.1 0.00017 29.9 2.8 26 121-146 12-37 (85)
499 2pqh_A Spectrin alpha chain, b 61.6 6 0.0002 29.2 3.1 26 122-147 7-32 (80)
500 1neg_A Spectrin alpha chain, b 61.6 5.9 0.0002 29.9 3.1 27 121-147 21-47 (83)
No 1
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.85 E-value=7.3e-21 Score=166.50 Aligned_cols=169 Identities=16% Similarity=0.170 Sum_probs=126.8
Q ss_pred ccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhc
Q psy9829 86 VGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIA 162 (333)
Q Consensus 86 ~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~ 162 (333)
.+.||||.|.||.+.|++. +++++||++|.|||.| +..++|++||+ +.||+.++.+.+ ..+.+++..
T Consensus 14 ~~~~lG~~i~~g~~~~~~~-~~~g~~V~~V~~~spA---------~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 83 (196)
T 3gsl_A 14 GNSGLGFSIAGGTDNPHIG-DDPSIFITKIIPGGAA---------AQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEA 83 (196)
T ss_dssp BTTBSSEEEECCTTSCTTS-SCCCEEEEEECTTSHH---------HHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTS
T ss_pred CCCCCCEEEEcccCCcccC-CCCCEEEEEECCCChH---------HhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 3678999999999999985 7899999999998754 43334699999 589999998875 445567778
Q ss_pred CCceEEEEEEeeccCCCC-------CCCCCCCCCCceeEEeeecCCCccccccceeecccccccCeEEEEEEccCcccCc
Q psy9829 163 HNCISAQIKRTHFNYDQP-------EKGEMSFRKGDVFHVIDTLHNGVVGSWQVFRIDFGIILGNKIFVKEVTHRLDNNA 235 (333)
Q Consensus 163 g~~v~L~v~R~~~~~~~p-------~~~~l~~~~g~~~hv~~sl~~~~lG~~~~~~~d~G~~l~~~IfI~~I~~g~~ag~ 235 (333)
+..+.|.|.|.......+ ...++++ .+. +.. .........++||.+|.++ ++
T Consensus 84 g~~v~l~v~r~~~~~~~~~~v~l~~~~~~lG~------~~~--------~~~----~~~~~~~~~gv~V~~V~~g---s~ 142 (196)
T 3gsl_A 84 GSIVRLYVMRRKPPAEKVMEIKLIKGPKGLGF------SIA--------GGV----GNQHIPGDNSIYVTKIIEG---GA 142 (196)
T ss_dssp CSEEEEEEEEECCCCEEEEEEEEEEBTTBSCE------EEE--------ESB----TSCSBTTBCCEEEEEECTT---SH
T ss_pred CCcEEEEEEecCCCccccEEEEEecCCCCceE------EEE--------ccC----CCcCCCCCCCEEEEEECCC---Ch
Confidence 899999998854221100 0001111 110 000 0000011247999999999 99
Q ss_pred cccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCC
Q psy9829 236 SAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 285 (333)
Q Consensus 236 Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~ 285 (333)
|++.|+|++||+|++|||+++.+++++|+.++|+.+.+.+.|+|.|+...
T Consensus 143 A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~~ 192 (196)
T 3gsl_A 143 AHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDVVYLKVAKPSNA 192 (196)
T ss_dssp HHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHSCCEEEEEEEEEESCC
T ss_pred HHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHcCCCeEEEEEeCCCCc
Confidence 99999999999999999999999999999999999999999999997653
No 2
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.78 E-value=1.3e-18 Score=154.54 Aligned_cols=162 Identities=14% Similarity=0.162 Sum_probs=121.6
Q ss_pred ccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccC--cc--hhhhhhh
Q psy9829 86 VGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNG--VV--GSWQVFR 160 (333)
Q Consensus 86 ~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~g--v~--~a~~alr 160 (333)
.+.+|||+|+||.|.+. ..++||++|.|||.| +..++|++||+ +.||+.++.+ .+ ..+.+++
T Consensus 27 ~~~~lG~~i~~g~~~~~----~~g~~V~~V~~~spA---------~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~ 93 (206)
T 3r0h_A 27 EKKPMGVIVCGGKNNHV----TTGCVITHVYPEGQV---------AADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFH 93 (206)
T ss_dssp TTSCCCEEEECCSSSSC----CSCEEEEEECTTSHH---------HHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHH
T ss_pred CCCCcCEEEecccCCCC----CCCeEEEEECCCChH---------HhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHH
Confidence 36799999999999843 268999999997754 44334799999 5899999999 64 4455667
Q ss_pred hcCCc-eEEEEEEeeccCCCCCCCCCCCCCCceeEEeeecCCCccccccceeecccccc---cCeEEEEEEccCcccCcc
Q psy9829 161 IAHNC-ISAQIKRTHFNYDQPEKGEMSFRKGDVFHVIDTLHNGVVGSWQVFRIDFGIIL---GNKIFVKEVTHRLDNNAS 236 (333)
Q Consensus 161 ~~g~~-v~L~v~R~~~~~~~p~~~~l~~~~g~~~hv~~sl~~~~lG~~~~~~~d~G~~l---~~~IfI~~I~~g~~ag~A 236 (333)
..+.. ++|.|.|...... ..+.+. +... ....+|+.+ ..++||.+|.++ ++|
T Consensus 94 ~~~~~~v~l~v~R~~~~~~------------~~~~v~--l~~~-------~~~~lG~~~~~~~~gv~V~~V~~g---s~A 149 (206)
T 3r0h_A 94 TTYEKAVTLTVFRADPPEL------------EKFNVD--LMKK-------AGKELGLSLSPNEIGCTIADLIQG---QYP 149 (206)
T ss_dssp SCCSSEEEEEEECCSSCCE------------EEEEEE--EECC-------TTCCCCEEEEECSSCEEEEEECTT---SCH
T ss_pred hcCCCceEEEEEecccCCC------------cEEEEE--EecC-------CCCccCeEEEcCCceEEEEEECCC---ChH
Confidence 77777 9999987432110 001111 0000 001234433 247999999999 999
Q ss_pred ccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 237 AGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 237 a~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
++.|+|++||+|++|||+++.+++++++..+|+.+...+.|+|.|..+
T Consensus 150 ~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~L~V~R~~~ 197 (206)
T 3r0h_A 150 EIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSMEVTRPKP 197 (206)
T ss_dssp HHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEECC
T ss_pred HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCC
Confidence 999899999999999999999999999999999999999999999654
No 3
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.77 E-value=3.3e-18 Score=180.01 Aligned_cols=168 Identities=16% Similarity=0.177 Sum_probs=127.6
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
..||||+|.||.|+|+.. ++.+|||++|.|||.| +..++|++||+ +.||++++.+++ .++.+++.++
T Consensus 69 ~~glGf~i~gg~~~~~~~-~~~g~~V~~v~~gspA---------~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g 138 (721)
T 2xkx_A 69 NSGLGFSIAGGTDNPHIG-DDPSIFITKIIPGGAA---------AQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAG 138 (721)
T ss_pred CCCCCEEEeCCcCCcccC-CCCCeEEEEeCCCCHH---------HhcCCCCCCCEEEEECCEECCCCCHHHHHHHhhccc
Confidence 469999999999999875 7899999999998754 44445799999 589999999985 4566777788
Q ss_pred CceEEEEEEeeccCCCCC-------CCCCCCCCCceeEEeeecCCCccccccceeecccccccCeEEEEEEccCcccCcc
Q psy9829 164 NCISAQIKRTHFNYDQPE-------KGEMSFRKGDVFHVIDTLHNGVVGSWQVFRIDFGIILGNKIFVKEVTHRLDNNAS 236 (333)
Q Consensus 164 ~~v~L~v~R~~~~~~~p~-------~~~l~~~~g~~~hv~~sl~~~~lG~~~~~~~d~G~~l~~~IfI~~I~~g~~ag~A 236 (333)
..|+|.|.|.......+. ..++|| .+ .+.. +..++....++||++|.++ ++|
T Consensus 139 ~~v~l~v~R~~~~~~~~~~v~l~k~~~~lG~------~i--------~~~~----~~~~~~~~~gv~V~~V~~g---s~A 197 (721)
T 2xkx_A 139 SIVRLYVMRRKPPAEKVMEIKLIKGPKGLGF------SI--------AGGV----GNQHIPGDNSIYVTKIIEG---GAA 197 (721)
T ss_pred cccceEEEecccccccceeeeeeeecCCCce------ee--------ccCC----CccccCCCCceEEEEeCCC---Cch
Confidence 899999988543211000 011111 00 0000 0000011247999999999 999
Q ss_pred ccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCC
Q psy9829 237 AGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 285 (333)
Q Consensus 237 a~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~ 285 (333)
++.|+|++||+|++|||+++.++++.+++.+|+.+.+.+.|+|.|+...
T Consensus 198 ~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~V~R~g~~ 246 (721)
T 2xkx_A 198 HKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDVVYLKVAKPSNA 246 (721)
T ss_pred hhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHHcCCCeEEEEEEeCCcc
Confidence 9999999999999999999999999999999999999999999998654
No 4
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.72 E-value=4.5e-17 Score=144.50 Aligned_cols=166 Identities=19% Similarity=0.263 Sum_probs=122.7
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCc--chhhhhhhhc-
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGV--VGSWQVFRIA- 162 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv--~~a~~alr~~- 162 (333)
..||||.+.||.+++.+ .+.+++|++|.|||.| +..++|++||+ +.+|+..+.+. .....+++..
T Consensus 17 ~~glG~~i~~~~~~~~~--~~~~~~V~~v~~~spA---------~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 85 (196)
T 1p1d_A 17 VTGFGIQLQGSVFATET--LSSPPLISYIEADSPA---------ERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSS 85 (196)
T ss_dssp TTBCCCEEEECSSCSSS--CSCSEEEEECCTTSHH---------HHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTCC
T ss_pred CCccCEEEeCCcCCCCC--CCCCEEEEEECCCCHH---------HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 57999999999999875 4789999999998755 43223699999 58999999875 3445566665
Q ss_pred -CCceEEEEEEeeccCCCCCCCCCCCCCCceeEEeeecCCCccccccceeecccccc--------cCeEEEEEEccCccc
Q psy9829 163 -HNCISAQIKRTHFNYDQPEKGEMSFRKGDVFHVIDTLHNGVVGSWQVFRIDFGIIL--------GNKIFVKEVTHRLDN 233 (333)
Q Consensus 163 -g~~v~L~v~R~~~~~~~p~~~~l~~~~g~~~hv~~sl~~~~lG~~~~~~~d~G~~l--------~~~IfI~~I~~g~~a 233 (333)
+..++|.|.|.....+.|.... ..+. +... ....+|+.+ ..++||.+|.++
T Consensus 86 ~g~~v~l~v~R~~~~~~~~~~~~--------~~v~--l~~~-------~~~~lG~~~~~~~~~~~~~gv~V~~V~~~--- 145 (196)
T 1p1d_A 86 ITSKVTLEIEFDVAESVIPSSGT--------FHVK--LPKK-------HSVELGITISSPSSRKPGDPLVISDIKKG--- 145 (196)
T ss_dssp SSSEEEEEEEECSCSCCBCCSSC--------EEEE--ECCC-------SSCCCCCEEECSCSSSTTCCCEEEECCSS---
T ss_pred CCCeEEEEEEecCCCCCCCCCCc--------EEEE--ecCC-------CCCCcCEEEECCCCCCCCCCEEEEEECCC---
Confidence 6789999988442221111110 1111 0000 001233333 357999999999
Q ss_pred CccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccC
Q psy9829 234 NASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREV 283 (333)
Q Consensus 234 g~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~ 283 (333)
++|++.|+|++||+|++|||+.+.+++++++.++|+.+.+.+.|+|.|+.
T Consensus 146 s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~ 195 (196)
T 1p1d_A 146 SVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQCEDLVKLKIRKDE 195 (196)
T ss_dssp SHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHCTTCEEEEEECCC
T ss_pred CcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEEEeCC
Confidence 99999989999999999999999999999999999999889999999864
No 5
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.68 E-value=3.4e-16 Score=138.84 Aligned_cols=168 Identities=15% Similarity=0.130 Sum_probs=121.2
Q ss_pred cccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCc--chhhhhhhh
Q psy9829 85 PVGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGV--VGSWQVFRI 161 (333)
Q Consensus 85 E~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv--~~a~~alr~ 161 (333)
..+.+|||.|.||.+.+ .+++|++|.+||.| +...+|++||+ +.||+.++.+. .....+++.
T Consensus 16 ~~~~~lG~~i~~~~~~~------~~~~V~~v~~~spA---------~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (200)
T 2qt5_A 16 KEGTTLGLTVSGGIDKD------GKPRVSNLRQGGIA---------ARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKN 80 (200)
T ss_dssp CTTCCCCEEEECCTTSS------SCSEEEEECTTSHH---------HHTTSCCTTCEEEEETTEECTTSCHHHHHHHHHT
T ss_pred CCCCCCCEEEecccCCC------CCeEEEEECCCChH---------HhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 34679999999998653 46899999998755 43225799999 68999999998 455566777
Q ss_pred cCCceEEEEEEeeccCCCCCCCCCCCCCCceeEEeeecCCCccccccceeecccccc----------cCeEEEEEEccCc
Q psy9829 162 AHNCISAQIKRTHFNYDQPEKGEMSFRKGDVFHVIDTLHNGVVGSWQVFRIDFGIIL----------GNKIFVKEVTHRL 231 (333)
Q Consensus 162 ~g~~v~L~v~R~~~~~~~p~~~~l~~~~g~~~hv~~sl~~~~lG~~~~~~~d~G~~l----------~~~IfI~~I~~g~ 231 (333)
.+..+.|.|.|..+.. ...+... .-..+.+. +... ...+|+.+ ..++||.++.++
T Consensus 81 ~g~~v~l~v~R~~~~~---~~~g~~~-~~~~~~v~--l~~~--------~~~lG~~l~~g~~~~~~~~~g~~V~~v~~~- 145 (200)
T 2qt5_A 81 VGERVVLEVEYELPPV---SIQGSSV-MFRTVEVT--LHKE--------GNTFGFVIRGGAHDDRNKSRPVVITCVRPG- 145 (200)
T ss_dssp CCSEEEEEEEEECCCC---CCCCSSE-EEEEEEEE--EECB--------TTBCSEEEEEECCSSTTTCEEEEEEEECTT-
T ss_pred CCCeEEEEEeccCCCc---ccCCCcc-ceeEEEEE--EecC--------CCCeEEEEECCCCCCccCCCCEEEEEECCC-
Confidence 7889999998854321 0011000 00001111 0000 01122221 247999999999
Q ss_pred ccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 232 DNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 232 ~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
++|++.|+|++||+|++|||+.+.+++++|+.++|+...+.+.|+|.|+..
T Consensus 146 --s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~ 196 (200)
T 2qt5_A 146 --GPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQEATLLIEYDVS 196 (200)
T ss_dssp --SHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEEEEEEEEEE
T ss_pred --ChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCc
Confidence 999988889999999999999999999999999999988899999999753
No 6
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.62 E-value=4.7e-15 Score=155.98 Aligned_cols=185 Identities=14% Similarity=0.193 Sum_probs=127.5
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
..+|||++.+|.+..+.+ ++.|+||++|.+||+| +..++|++||+ +.||+..+.+++ .++.+++..+
T Consensus 164 ~~~lG~~i~~~~~~~~~~-~~~gv~V~~V~~gs~A---------~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 233 (721)
T 2xkx_A 164 PKGLGFSIAGGVGNQHIP-GDNSIYVTKIIEGGAA---------HKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTY 233 (721)
T ss_pred cCCCceeeccCCCccccC-CCCceEEEEeCCCCch---------hhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHHcCC
Confidence 457999999999988764 6789999999998754 44344799999 589999999985 4566777778
Q ss_pred CceEEEEEEeeccC-----CCCCCC-C----CCC-CC-----Ccee--EEe-------eecCCCcccc-----c------
Q psy9829 164 NCISAQIKRTHFNY-----DQPEKG-E----MSF-RK-----GDVF--HVI-------DTLHNGVVGS-----W------ 207 (333)
Q Consensus 164 ~~v~L~v~R~~~~~-----~~p~~~-~----l~~-~~-----g~~~--hv~-------~sl~~~~lG~-----~------ 207 (333)
..+.|.|.|..... .+|... . +.. .. +..+ .++ .......++. .
T Consensus 234 ~~v~l~V~R~g~~~~~~~~~~p~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~l 313 (721)
T 2xkx_A 234 DVVYLKVAKPSNAYLSDSYAPPDITTSYSQHLDNEISHSSYLGTDYPTAMTPTSPRRYSPVAKDLLGEEDIPREPRRIVI 313 (721)
T ss_pred CeEEEEEEeCCcccccCCCCCCCcccCCCCCcccccCCcccccccccccCCCCCCcccCCcccccccccccccceEEEEE
Confidence 88999998843221 001000 0 000 00 0000 000 0000000000 0
Q ss_pred cceeecccccc-----cCeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEecc
Q psy9829 208 QVFRIDFGIIL-----GNKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRRE 282 (333)
Q Consensus 208 ~~~~~d~G~~l-----~~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~ 282 (333)
......+|+.+ ..++||++|.++ ++|++.|+|++||+|++|||+++.+++++|++++|+.+.+.+.|+|.|+
T Consensus 314 ~~~~~~lG~~i~~~~~~~gv~V~~V~~g---s~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~l~~~~~~v~L~v~r~ 390 (721)
T 2xkx_A 314 HRGSTGLGFNIVGGEDGEGIFISFILAG---GPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYK 390 (721)
T ss_pred EECCCCccEEEeccCCCCCeEEEEeCCC---ChHHhcCCCccCCEEEEECCEECCCCCHHHHHHHHHhcCCeEEEEEEeC
Confidence 00012356654 258999999999 9999999999999999999999999999999999999999999999887
Q ss_pred CC
Q psy9829 283 VP 284 (333)
Q Consensus 283 ~~ 284 (333)
..
T Consensus 391 ~~ 392 (721)
T 2xkx_A 391 PE 392 (721)
T ss_pred ch
Confidence 53
No 7
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.53 E-value=2.2e-15 Score=148.02 Aligned_cols=154 Identities=10% Similarity=0.084 Sum_probs=55.7
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhc-
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIA- 162 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~- 162 (333)
+.+|||.|.|+.+. ..+++++|++|.|||.| +..++|++||+ +.||+.++.+.+ .++.+++..
T Consensus 215 ge~lG~~i~~~~~g----~~~~g~~V~~V~~gspA---------~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~ 281 (388)
T 3suz_A 215 GEILGVVVVESGWG----SILPTVILANMMNGGPA---------ARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLK 281 (388)
T ss_dssp SCCCCCCCBCC-------CCSCCCBCCCCCCSSHH---------HHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCT
T ss_pred CCceeEEEEecCCC----CcCCCEEEEeeCCCCHH---------HHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhcc
Confidence 67999999983221 24678999999998754 44445799999 589999999984 556677764
Q ss_pred -CCceEEEEEEeeccCCCCCCCCCCCCCCceeEEeeecCCCccccccceeecccccccCeEEEEEEccCcccCccccCCC
Q psy9829 163 -HNCISAQIKRTHFNYDQPEKGEMSFRKGDVFHVIDTLHNGVVGSWQVFRIDFGIILGNKIFVKEVTHRLDNNASAGTHQ 241 (333)
Q Consensus 163 -g~~v~L~v~R~~~~~~~p~~~~l~~~~g~~~hv~~sl~~~~lG~~~~~~~d~G~~l~~~IfI~~I~~g~~ag~Aa~dg~ 241 (333)
+..++|.|.|..... . ..+.. ......+|+.+.. .||.+|.++ ++|++.|
T Consensus 282 ~~~~v~l~v~r~~~~~------~--------v~l~~----------~~~~~~lG~~i~~-g~I~~V~~g---s~A~~aG- 332 (388)
T 3suz_A 282 NQTQVKLNIVSCPPVT------T--------VLIKR----------PDLKYQLGFSVQN-GIICSLMRG---GIAERGG- 332 (388)
T ss_dssp TCSCEEEEEEECCSCC----------------------------------------------------------------
T ss_pred CCCccccccccccccc------e--------eeEee----------cCCCCccceEEec-CEEEEeecC---CHHHHcC-
Confidence 344899998732111 0 00000 0011235555443 389999999 9999888
Q ss_pred CCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEecc
Q psy9829 242 LAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRRE 282 (333)
Q Consensus 242 L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~ 282 (333)
|++||+|++|||+++.+++|++++++|+.+...++|+|...
T Consensus 333 L~~GD~Il~VNg~~v~~~s~~~~~~~l~~~~~~v~L~V~p~ 373 (388)
T 3suz_A 333 VRVGHRIIEINGQSVVATAHEKIVQALSNSVGEIHMKTMPA 373 (388)
T ss_dssp -----------------------------------------
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEec
Confidence 99999999999999999999999999999999999988543
No 8
>3tvt_A Disks large 1 tumor suppressor protein; DLG, SRC-homology-3, guanylate kinase, phosphorylation-depen cell membrane; 1.60A {Drosophila melanogaster} PDB: 3uat_A*
Probab=99.42 E-value=5.9e-14 Score=133.57 Aligned_cols=94 Identities=22% Similarity=0.451 Sum_probs=82.5
Q ss_pred CCcCCCCCCCCeeehHHHHHHHHcCCEEEEecCccccccccccccccEEEEEecCchhhHHhhhcCC-CcchhhHHHHHh
Q psy9829 2 MEESDSKKCSGIIRLSAIRDMMDRGRHGLLDITPNAVDRLNYAQFYPIVIFLRAETKSNVKELRAGI-PKYHTNLARQRS 80 (333)
Q Consensus 2 ~~~~~~~~~~~~tsl~sVr~V~e~gkhCILDv~~~avk~L~~~~l~PivIfIkp~s~~~lk~lr~~~-~Es~~ki~~rae 80 (333)
+|-++..+++++|++++|++++++||+|||||+++++++|+...++|++|||+|||.+.|++++.+. +++.+++..++.
T Consensus 165 lE~a~~~gn~YGT~~~~V~~~~~~gk~viLdid~qg~~~lk~~~~~pi~IFI~PpS~e~L~~r~~~r~~e~~~~~~~r~~ 244 (292)
T 3tvt_A 165 IEAGQYNDNLYGTSVASVREVAEKGKHCILDVSGNAIKRLQVAQLYPVAVFIKPKSVDSVMEMNRRMTEEQAKKTYERAI 244 (292)
T ss_dssp EEEEEETTEEEEEEHHHHHHHHHHTCEEEECCCTHHHHHHHHTTCCCEEEEECCSCHHHHHHTCTTSCTTHHHHHHHHHH
T ss_pred EEEEEEccceeEEehHHHHHHHHcCCcEEEeccchhhhhcccccccceEEEEECCCHHHHHHHHhCCCchhHHHHHHHHH
Confidence 4556778899999999999999999999999999999999999999999999999999999766554 456788888988
Q ss_pred hccccccceeeEEEe
Q psy9829 81 RVLFPVGSTFVGSVL 95 (333)
Q Consensus 81 r~~qE~G~~~g~~i~ 95 (333)
+++++++..|...|.
T Consensus 245 k~e~e~~~~fD~vIv 259 (292)
T 3tvt_A 245 KMEQEFGEYFTGVVQ 259 (292)
T ss_dssp HHHHHHTTTCSEEEC
T ss_pred HHHHhhhhhCCEEEE
Confidence 888888877777765
No 9
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.33 E-value=2e-12 Score=101.19 Aligned_cols=70 Identities=43% Similarity=0.715 Sum_probs=63.8
Q ss_pred ecccccccCeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 212 IDFGIILGNKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 212 ~d~G~~l~~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
..||+.+.+++||.+|.++ ++|++.|+|++||+|++|||+++.+++++|+.++|+.+.+.++|+|.+...
T Consensus 13 ~~~G~~~~~gv~V~~V~~g---spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~v~L~v~~~~~ 82 (88)
T 3e17_A 13 EEYGLRLGSQIFVKEMTRT---GLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSRGKLQLVVLRDLE 82 (88)
T ss_dssp CCCCEEEEEEEEEEEECTT---SHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEEEECCC--
T ss_pred CCCCEEEeCCEEEEEECCC---CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEeCCCc
Confidence 4678887789999999999 999999999999999999999999999999999999999999999976643
No 10
>3kfv_A Tight junction protein ZO-3; structural genomics consortium, SGC, cell junction, cell membrane, membrane, SH3 domain; 2.80A {Homo sapiens}
Probab=99.32 E-value=7.1e-13 Score=127.13 Aligned_cols=87 Identities=32% Similarity=0.603 Sum_probs=66.3
Q ss_pred CCCCCeeehHHHHHHHHcCCEEEEecCccccccccccccccEEEEEecCchhhHHhhhcCCC-cchhhH---HHHHhhcc
Q psy9829 8 KKCSGIIRLSAIRDMMDRGRHGLLDITPNAVDRLNYAQFYPIVIFLRAETKSNVKELRAGIP-KYHTNL---ARQRSRVL 83 (333)
Q Consensus 8 ~~~~~~tsl~sVr~V~e~gkhCILDv~~~avk~L~~~~l~PivIfIkp~s~~~lk~lr~~~~-Es~~ki---~~raer~~ 83 (333)
.++.+++++++|++++++||+|||||++|++++|+..+++|++|||+|||++.|+++++|.+ ++++.+ ...+.+++
T Consensus 180 i~~~~fis~~~V~~vl~~Gk~~ILDId~QGa~~lk~~~~~pi~IFI~PPS~eeL~~rr~R~~~esee~~~r~~~aa~eiE 259 (308)
T 3kfv_A 180 DSPSKIIKLDTVRVIAEKDKHALLDVTPSAIERLNYVQYYPIVVFFIPESRPALKALRQWLAPASRRSTRRLYAQAQKLR 259 (308)
T ss_dssp -----CCCHHHHHHHHHTTCEEEECCCHHHHHHHHHTTCCCEEEEEEESCHHHHHHHHHHHSTTCCCCHHHHHHHHHHHH
T ss_pred ccCCCeecHHHHHHHHHCCCcEEEEECHHHHHHHHhcCCCCEEEEEeCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 35677889999999999999999999999999999999999999999999999998877754 333333 22333344
Q ss_pred ccccceeeEEE
Q psy9829 84 FPVGSTFVGSV 94 (333)
Q Consensus 84 qE~G~~~g~~i 94 (333)
++++.-|...|
T Consensus 260 ~~~~~~FD~vI 270 (308)
T 3kfv_A 260 KHSSHLFTATI 270 (308)
T ss_dssp HHHGGGCSEEE
T ss_pred HhhhccCcEEE
Confidence 55666677766
No 11
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=99.30 E-value=1e-12 Score=132.50 Aligned_cols=87 Identities=41% Similarity=0.714 Sum_probs=69.2
Q ss_pred CCCCeeehHHHHHHHHcCCEEEEecCccccccccccccccEEEEEecCchhhHHhhhcCCC-cc---hhhHHHHHhhccc
Q psy9829 9 KCSGIIRLSAIRDMMDRGRHGLLDITPNAVDRLNYAQFYPIVIFLRAETKSNVKELRAGIP-KY---HTNLARQRSRVLF 84 (333)
Q Consensus 9 ~~~~~tsl~sVr~V~e~gkhCILDv~~~avk~L~~~~l~PivIfIkp~s~~~lk~lr~~~~-Es---~~ki~~raer~~q 84 (333)
..+..|++++|++++++||||||||++|++++|+.++++|++|||+|||++.|+++|+|+. ++ ..++...++++++
T Consensus 264 ~~Y~FTs~~~V~~vl~~Gk~~iLdId~qg~~~l~~~~~~p~~IFI~PPS~e~L~~~~~rl~~~see~~~r~~~~a~~~e~ 343 (468)
T 3shw_A 264 RSSGIIRLHTIKQIIDQDKHALLDVTPNAVDRLNYAQWYPIVVFLNPDSKQGVKTMRMRLCPESRKSARKLYERSHKLRK 343 (468)
T ss_dssp ---CBCCHHHHHHHHTTTCEEEECCCHHHHHHHHHTTCCCEEEEEECSCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHH
T ss_pred ccCCcccHHHHHHHHHCCCeEEEEeCHHHHHHHHhcCCCCEEEEEeCcCHHHHHHHHhccCCCCHHHHHHHHHHHHHHHH
Confidence 3466799999999999999999999999999999999999999999999999998766653 22 3334444444556
Q ss_pred cccceeeEEEe
Q psy9829 85 PVGSTFVGSVL 95 (333)
Q Consensus 85 E~G~~~g~~i~ 95 (333)
++...|...|.
T Consensus 344 ~~~~~fD~vIv 354 (468)
T 3shw_A 344 NNHHLFTTTIN 354 (468)
T ss_dssp HHGGGCSEEEE
T ss_pred hhhccCCEEEE
Confidence 67777888777
No 12
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.28 E-value=3.7e-11 Score=103.72 Aligned_cols=145 Identities=14% Similarity=0.123 Sum_probs=105.1
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcch--hhhhhhh-c
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVVG--SWQVFRI-A 162 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~~--a~~alr~-~ 162 (333)
..+|||.+.+. +.+++|++|.|||.| +.- +|++||+ +.+|+..+.+... .+..++. .
T Consensus 15 ~~~lG~~~~~~---------~~g~~V~~v~~~spA---------~~a-Gl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~ 75 (166)
T 1w9e_A 15 DGKIGLRLKSI---------DNGIFVQLVQANSPA---------SLV-GLRFGDQVLQINGENCAGWSSDKAHKVLKQAF 75 (166)
T ss_dssp TSCCSEEEEEE---------TTEEEEEEECTTSHH---------HHT-TCCTTCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred CCcEeEEEEeC---------CCCEEEEEECCCChH---------HHc-CCCCCCEEEEECCEECCCCCHHHHHHHHhcCC
Confidence 35899998852 478999999998755 332 4799999 5899999999865 3344444 3
Q ss_pred CCceEEEEEEeeccCCCCCCCCCCCCCCceeEEeeecCCCccccccceeecccccccCeEEEEEEccCcccCccccCCCC
Q psy9829 163 HNCISAQIKRTHFNYDQPEKGEMSFRKGDVFHVIDTLHNGVVGSWQVFRIDFGIILGNKIFVKEVTHRLDNNASAGTHQL 242 (333)
Q Consensus 163 g~~v~L~v~R~~~~~~~p~~~~l~~~~g~~~hv~~sl~~~~lG~~~~~~~d~G~~l~~~IfI~~I~~g~~ag~Aa~dg~L 242 (333)
+..+.|.|+| .... ....++. . ....+|+.+..+ +|.++.++ ++|++.| |
T Consensus 76 ~~~v~l~vr~-~~~~-------------~~v~l~~----~-------~~~~lG~~~~~g-~v~~v~~~---s~a~~aG-l 125 (166)
T 1w9e_A 76 GEKITMTIRD-RPFE-------------RTITMHK----D-------STGHVGFIFKNG-KITSIVKD---SSAARNG-L 125 (166)
T ss_dssp SSEEEEEEEC-CTTC-------------EEEEEEC----C-------TTSCCSEEEETT-EEEEECTT---SHHHHTT-C
T ss_pred CCEEEEEEEc-CCCc-------------EEEEEec----C-------CCCcEeEEEeCC-EEEEEccC---CHHHHcC-C
Confidence 4579999944 2110 0011110 0 012345544344 89999999 8888776 9
Q ss_pred CCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEe
Q psy9829 243 AEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIR 280 (333)
Q Consensus 243 ~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~ 280 (333)
++||+|++|||+.+.++.++++...++.....+.|.|.
T Consensus 126 ~~GD~I~~ing~~v~~~~~~~v~~~v~r~g~~~~l~v~ 163 (166)
T 1w9e_A 126 LTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIM 163 (166)
T ss_dssp CSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEE
T ss_pred CCCCEEEEECCEECCCCChHHHHHHHhhCCCEEEEEEE
Confidence 99999999999999999999999999999998888764
No 13
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=99.28 E-value=1.8e-12 Score=127.79 Aligned_cols=87 Identities=41% Similarity=0.721 Sum_probs=69.7
Q ss_pred CCCCeeehHHHHHHHHcCCEEEEecCccccccccccccccEEEEEecCchhhHHhhhcCCC-cchhh---HHHHHhhccc
Q psy9829 9 KCSGIIRLSAIRDMMDRGRHGLLDITPNAVDRLNYAQFYPIVIFLRAETKSNVKELRAGIP-KYHTN---LARQRSRVLF 84 (333)
Q Consensus 9 ~~~~~tsl~sVr~V~e~gkhCILDv~~~avk~L~~~~l~PivIfIkp~s~~~lk~lr~~~~-Es~~k---i~~raer~~q 84 (333)
..+..+++++|++++++||||||||++|++++|+.++++|++|||+|||++.|+++++|++ ++++. +.+.++++++
T Consensus 272 ~~Y~Fv~~~~V~~~~~~Gk~~iLdId~qg~~~l~~~~~~p~~IFI~PPS~~~L~~~~~r~~~~s~e~~~~~~~~a~~~e~ 351 (391)
T 3tsz_A 272 RSSGIIRLHTIKQIIDQDKHALLDVTPNAVDRLNYAQWYPIVVFLNPDSKQGVKTMRMRLCPESRKSARKLYERSHKLRK 351 (391)
T ss_dssp C--CCCCHHHHHHHHTTTCEEEECCCHHHHHHHHHTTCCCEEEEEECCCHHHHHHHHHHHCSSCCCCHHHHHHHHHHHHH
T ss_pred ccCCcCcHHHHHHHHHcCCEEEEEeCHHHHHHHHhCCCCCEEEEEeCcCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 4567789999999999999999999999999999999999999999999999998877754 33333 3333344456
Q ss_pred cccceeeEEEe
Q psy9829 85 PVGSTFVGSVL 95 (333)
Q Consensus 85 E~G~~~g~~i~ 95 (333)
++...|...|.
T Consensus 352 ~~~~~fd~viv 362 (391)
T 3tsz_A 352 NNHHLFTTTIN 362 (391)
T ss_dssp HHGGGCSEEEE
T ss_pred hccccCcEEEE
Confidence 67777887776
No 14
>1kjw_A Postsynaptic density protein 95; protein-protein interaction, scaffold, neuropeptide; 1.80A {Rattus norvegicus} SCOP: b.34.2.1 c.37.1.1 PDB: 1jxm_A* 1jxo_A
Probab=99.25 E-value=2.4e-12 Score=122.32 Aligned_cols=92 Identities=26% Similarity=0.389 Sum_probs=75.3
Q ss_pred CCcCCCCCCCCeeehHHHHHHHHcCCEEEEecCccccccccccccccEEEEEecCchhhHHhhhcCCCcchhhHHHHHhh
Q psy9829 2 MEESDSKKCSGIIRLSAIRDMMDRGRHGLLDITPNAVDRLNYAQFYPIVIFLRAETKSNVKELRAGIPKYHTNLARQRSR 81 (333)
Q Consensus 2 ~~~~~~~~~~~~tsl~sVr~V~e~gkhCILDv~~~avk~L~~~~l~PivIfIkp~s~~~lk~lr~~~~Es~~ki~~raer 81 (333)
+|-.++.+++++|+.++|++++++|++||||++++++++|+..+++|++|||+|||.+.|++|++|.+++ .+..+.++
T Consensus 170 lE~~~~~g~~YGt~~~~V~~~~~~G~~vildid~~g~~~l~~~~~~pi~IfI~pps~~~L~~L~~R~t~~--~i~~rl~~ 247 (295)
T 1kjw_A 170 IEAGQYNSHLYGTSVQSVREVAEQGKHCILDVSANAVRRLQAAHLHPIAIFIRPRSLENVLEINKRITEE--QARKAFDR 247 (295)
T ss_dssp EEEEEETTEEEEEEHHHHHHHHHTTCEEEECCCTTHHHHHHHTTCCCEEEEECCSSHHHHHHHCTTSCHH--HHHHHHHH
T ss_pred EEEEEEcCcEeeeeHHHHHHHHhcCCeEEEEeCHHHHHHHHhcccCCeEEEEECCCHHHHHHHHhcCCHH--HHHHHHHH
Confidence 4556677889999999999999999999999999999999999999999999999999999999998874 24444444
Q ss_pred c---cccccceeeEEEe
Q psy9829 82 V---LFPVGSTFVGSVL 95 (333)
Q Consensus 82 ~---~qE~G~~~g~~i~ 95 (333)
+ ++++...|...|.
T Consensus 248 a~~~e~~~~~~fd~viv 264 (295)
T 1kjw_A 248 ATKLEQEFTECFSAIVE 264 (295)
T ss_dssp HHHHHHHHGGGCSEEEC
T ss_pred HHHHHHhccccCeEEEE
Confidence 3 3444545655553
No 15
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.15 E-value=7.6e-11 Score=95.44 Aligned_cols=63 Identities=21% Similarity=0.368 Sum_probs=57.7
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhc---CCceEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS---KEKLSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s---~~~v~L~V~R~~~~ 285 (333)
.++||.+|.++ ++|++.|+|++||+|++|||+++.+++|+|+.++|+.+ ...|.|+|.|...+
T Consensus 33 ~gv~V~~V~~~---spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~v~l~v~R~~~~ 98 (108)
T 3cbz_A 33 GGIYIGSIMKG---GAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVHKPGPIVLTVAKSGGG 98 (108)
T ss_dssp CEEEEEEECTT---SHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHTSSSCEEEEEECCCC-
T ss_pred CCEEEEEECCC---ChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcccCCCeEEEEEEeCCCC
Confidence 57999999999 99999999999999999999999999999999999988 45799999997643
No 16
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.13 E-value=8.8e-11 Score=98.52 Aligned_cols=62 Identities=24% Similarity=0.369 Sum_probs=58.4
Q ss_pred eEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC--CceEEEEeccCCC
Q psy9829 221 KIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSK--EKLSLTIRREVPR 285 (333)
Q Consensus 221 ~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~--~~v~L~V~R~~~~ 285 (333)
++||.+|.++ ++|++.|+|++||+|++|||+++.+++|+|++++|+.++ +.|.|+|.|+.+.
T Consensus 66 gv~V~~V~~g---spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g~~ 129 (131)
T 1wfg_A 66 CAFITKVKKG---SLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRSGPS 129 (131)
T ss_dssp EEEEEEECTT---SHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEEEEEECSC
T ss_pred CEEEEEECCC---ChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEcCCCC
Confidence 7999999999 999999999999999999999999999999999999986 8899999998653
No 17
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.13 E-value=6.1e-11 Score=98.91 Aligned_cols=64 Identities=27% Similarity=0.320 Sum_probs=59.5
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhc-------CCceEEEEeccCCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS-------KEKLSLTIRREVPRP 286 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s-------~~~v~L~V~R~~~~~ 286 (333)
.++||.+|.++ ++|+++|+|++||+|++|||+++.+++|+||+.+|+.+ .+.|.|+|.|+..+.
T Consensus 55 ~gi~V~~V~~g---spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~g~~~~~v~l~v~R~~~~~ 125 (127)
T 1wg6_A 55 LGIFIKSIIHG---GAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMSMEGNIRGMIQLVILRRSGPS 125 (127)
T ss_dssp EEEEEEECCSS---SSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHHHHHHHTCEEEEEEEECSCSS
T ss_pred CCEEEEEECCC---CHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhccccCCCCEEEEEEEeCCCCC
Confidence 37999999999 99999999999999999999999999999999999987 789999999987654
No 18
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.11 E-value=1.4e-10 Score=96.23 Aligned_cols=64 Identities=31% Similarity=0.470 Sum_probs=59.4
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCC-CCCHHHHHHHHHhcCCceEEEEeccCCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTD-GMSVKEARKLIDSSKEKLSLTIRREVPRP 286 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~-~~s~~eA~~~l~~s~~~v~L~V~R~~~~~ 286 (333)
.++||.+|.++ ++|++.|+|++||+|++|||+++. +++++++..+|+.+.+.|.|+|.|+....
T Consensus 54 ~gv~V~~V~~~---spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~~~~~v~l~v~r~~~~~ 118 (128)
T 2db5_A 54 VDIFVKDVQPG---SVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQTTGSLRLIVAREPVHT 118 (128)
T ss_dssp EEEEEECCCTT---SHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHHCCSEEEEEEEECCCSS
T ss_pred CCEEEEEECCC---CHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcCCCeEEEEEEcCCCCC
Confidence 37999999999 999999999999999999999997 99999999999999999999999986543
No 19
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.11 E-value=1.8e-10 Score=92.58 Aligned_cols=66 Identities=18% Similarity=0.329 Sum_probs=60.9
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCCCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPRPTA 288 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~~~~ 288 (333)
.++||++|.++ ++|++.|.|++||+|++|||+++.++++.++..+|+.+.+.+.|+|.|..+.+++
T Consensus 41 ~gv~V~~V~~~---spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~~~~s 106 (107)
T 1uhp_A 41 EGIFVSKIVDS---GPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEAFKTAKEPIVVQVLRRTSGPSS 106 (107)
T ss_dssp CCCEEEEECSS---SHHHHTTCCCSSCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEEECCSSCSC
T ss_pred CCEEEEEeCCC---ChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEeCCCCCCC
Confidence 47999999999 9999998899999999999999999999999999999999999999998766543
No 20
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.10 E-value=7.3e-11 Score=97.63 Aligned_cols=61 Identities=20% Similarity=0.263 Sum_probs=57.9
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREV 283 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~ 283 (333)
.++||++|.++ ++|++.|+|++||+|++|||+++.+++++|+..+|+.+.+.|.|+|.|..
T Consensus 53 ~gv~V~~V~~g---spA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~L~v~R~~ 113 (118)
T 3b76_A 53 LPIYVISVEPG---GVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRTSSSIVLKALEVK 113 (118)
T ss_dssp CCEEEEEECTT---SHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSCCSEEEEEEEEEE
T ss_pred CCEEEEEECCC---CHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 46999999999 99999999999999999999999999999999999999999999998854
No 21
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.10 E-value=1.4e-10 Score=95.96 Aligned_cols=63 Identities=21% Similarity=0.330 Sum_probs=59.1
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~ 285 (333)
.++||.+|.++ ++|++.|.|++||+|++|||+++.+++++++..+|+.+.+.|.|+|.|+...
T Consensus 53 ~~~~V~~V~~~---spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~v~l~v~r~g~~ 115 (120)
T 2iwo_A 53 VPIFIAMMHPT---GVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKNASGSIEMQVVAGGDV 115 (120)
T ss_dssp EEEEEEEECTT---SHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHHCCSEEEEEEECCTTS
T ss_pred CCEEEEEECCC---CHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCcc
Confidence 37999999999 9999998999999999999999999999999999999999999999998654
No 22
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.09 E-value=1.4e-10 Score=93.29 Aligned_cols=64 Identities=23% Similarity=0.351 Sum_probs=59.8
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPRP 286 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~~ 286 (333)
.++||.+|.++ ++|++.|+|++||+|++|||+++.++++.++..+++.+.+.+.|+|.|+....
T Consensus 40 ~gv~V~~V~~~---spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~~~ 103 (107)
T 1wf8_A 40 LGIFVKTVTEG---GAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNTKGNVRFVIGREKPSG 103 (107)
T ss_dssp EEEEEEEECTT---CHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHHHCCSEEEEEEEEECCCS
T ss_pred CCEEEEEeCCC---CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCeEEEEEEeCCCCC
Confidence 47999999999 99999999999999999999999999999999999999999999999986543
No 23
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.08 E-value=2.3e-10 Score=95.62 Aligned_cols=63 Identities=19% Similarity=0.374 Sum_probs=57.6
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCc-eEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEK-LSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~-v~L~V~R~~~~ 285 (333)
.++||.+|.++ ++|++.|.|++||+|++|||+++.+++|+||+++|+.+.+. +.|+|.|....
T Consensus 57 ~~i~I~~V~~g---s~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~v~r~~~~ 120 (130)
T 1i16_A 57 KPLTINRIFKG---AASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTIVIRRKSLQ 120 (130)
T ss_dssp CCCEEEEECSS---CCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTSCSSEEEEEEEEESSC
T ss_pred CCEEEEEECCC---CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEEEeCCCC
Confidence 46999999999 99999999999999999999999999999999999999765 99999987543
No 24
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.08 E-value=1.8e-10 Score=93.61 Aligned_cols=61 Identities=26% Similarity=0.420 Sum_probs=57.0
Q ss_pred eEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CceEEEEeccCC
Q psy9829 221 KIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSK----EKLSLTIRREVP 284 (333)
Q Consensus 221 ~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~----~~v~L~V~R~~~ 284 (333)
++||.+|.++ ++|++.|+|++||+|++|||+++.+++|+||+++|+.+. ..+.|.+.|+..
T Consensus 42 ~~~V~~v~~~---s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~r~~~~~~l~v~R~~~ 106 (109)
T 1wi4_A 42 LVYIHEVIPG---GDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKLRSESPWEIAFIRSGP 106 (109)
T ss_dssp SEEEEEECTT---SHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSCCSSSSCEEEEEECCCC
T ss_pred CEEEEEeCCC---ChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHccccCCCceEEEEEEeCCC
Confidence 6999999999 999999999999999999999999999999999999987 678999988754
No 25
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.07 E-value=2.1e-10 Score=94.04 Aligned_cols=63 Identities=25% Similarity=0.300 Sum_probs=59.0
Q ss_pred eEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCCC
Q psy9829 221 KIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPRP 286 (333)
Q Consensus 221 ~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~~ 286 (333)
++||.+|.++ ++|++.|+|++||+|++|||+.+.+++++|+.++|+...+.+.|+|.|.....
T Consensus 43 ~~~V~~V~~~---spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~~~ 105 (117)
T 1v62_A 43 VITIDRIKPA---SVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLASISEKVRLEILPVPQSQ 105 (117)
T ss_dssp EEEEEECCTT---SHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHSCSSEEEEEECCBTTBC
T ss_pred CEEEEEECCC---CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEECCCCC
Confidence 4999999999 99999999999999999999999999999999999998999999999986543
No 26
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.07 E-value=2.3e-10 Score=92.09 Aligned_cols=61 Identities=15% Similarity=0.229 Sum_probs=55.6
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCC--ceEEEEeccC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKE--KLSLTIRREV 283 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~--~v~L~V~R~~ 283 (333)
+.+||++|.+| ++|++++.|++||.|++|||+++.+++|.|++++|+.+.. .++|++.++-
T Consensus 28 g~~~I~rI~~g---g~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~~~L~lv~p~ 90 (95)
T 3gge_A 28 GYAFIKRIKDG---GVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLIEPK 90 (95)
T ss_dssp SCCEEEEECTT---SHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEEEEEEEEEC
T ss_pred CcEEEEEEcCC---ChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCEEEEEEECcc
Confidence 35899999999 9999999999999999999999999999999999999765 7788776654
No 27
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.06 E-value=3.3e-10 Score=90.72 Aligned_cols=65 Identities=25% Similarity=0.364 Sum_probs=60.1
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPRPT 287 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~~~ 287 (333)
.++||.+|.++ ++|++.|+|++||+|++|||+++.++++.++..+++.+.+.+.|+|.|+.....
T Consensus 38 ~gv~V~~V~~~---spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~~ 102 (106)
T 3axa_A 38 LGIYVKSVVKG---GAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQGAIRR 102 (106)
T ss_dssp EEEEEEEEBTT---SHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEECCCSSCC
T ss_pred CCEEEEEECCC---CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCcccc
Confidence 47999999999 999999999999999999999999999999999999999999999999865443
No 28
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.05 E-value=2.8e-10 Score=91.87 Aligned_cols=62 Identities=19% Similarity=0.261 Sum_probs=57.4
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhc-CCceEEEEeccCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS-KEKLSLTIRREVP 284 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s-~~~v~L~V~R~~~ 284 (333)
.++||.+|.++ ++|++.|+|++||+|++|||+++.+++++|+.++|+.+ .+.|.|+|.|...
T Consensus 44 ~g~~V~~v~~~---spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~v~R~~~ 106 (108)
T 2d92_A 44 SVIVIRSLVAD---GVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAVPPGLVHLGICSGPS 106 (108)
T ss_dssp EEEEEEEECTT---CHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHSCSEEEEEEEECCCC
T ss_pred CCEEEEEECCC---CHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEcCCC
Confidence 47999999999 99999999999999999999999999999999999997 4689999998753
No 29
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.05 E-value=1.9e-10 Score=101.13 Aligned_cols=60 Identities=25% Similarity=0.387 Sum_probs=57.6
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEecc
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRRE 282 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~ 282 (333)
.+|||++|.++ ++|++.|+|++||+|++|||+++.+++|.+|+.+|+.+...|.|+|.|+
T Consensus 111 ~gi~V~~V~~g---spA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~~g~~v~L~V~R~ 170 (170)
T 3egg_C 111 LGIFVKTVTEG---GAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNTKGRVRFMIGRE 170 (170)
T ss_dssp BEEEEEEECTT---SHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHHHCCSEEEEEEEEC
T ss_pred CCEEEEEECCC---ChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEeC
Confidence 47999999999 9999999999999999999999999999999999999999999999985
No 30
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.05 E-value=3.2e-10 Score=90.66 Aligned_cols=63 Identities=22% Similarity=0.384 Sum_probs=58.6
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhc--CCceEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS--KEKLSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s--~~~v~L~V~R~~~~ 285 (333)
.++||.+|.++ ++|++.|+|++||+|++|||+++.+++++|+.++|+.+ .+.|.|+|.|+...
T Consensus 34 ~~~~V~~V~~~---spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~ 98 (103)
T 1uep_A 34 QPILIGAVIAM---GSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNGQVNLTVRRKVLS 98 (103)
T ss_dssp SCCBEEEECTT---STTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred CCeEEEEeCCC---ChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCcEEEEEEeCCCC
Confidence 46999999999 99999999999999999999999999999999999998 68999999998654
No 31
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.04 E-value=3.1e-10 Score=93.31 Aligned_cols=61 Identities=25% Similarity=0.407 Sum_probs=57.9
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREV 283 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~ 283 (333)
.++||++|.++ ++|++.|+|++||+|++|||+++.+++++++..+|+.+.+.|.|+|.|+.
T Consensus 54 ~gv~V~~V~~g---spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~ 114 (117)
T 2byg_A 54 NSIYVTKIIDG---GAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNTSEVVYLKVGKPT 114 (117)
T ss_dssp CCEEEEEECTT---SHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEEE
T ss_pred CCEEEEEECCC---CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 47999999999 99999999999999999999999999999999999999999999999875
No 32
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.04 E-value=3.3e-10 Score=88.67 Aligned_cols=62 Identities=18% Similarity=0.281 Sum_probs=57.1
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
.++||.+|.++ ++|++.|+|++||+|++|||+++.+++++++.++|+.+.+.++|+|.|...
T Consensus 28 ~~~~V~~v~~g---spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~~~~~ 89 (93)
T 3o46_A 28 GAIIVARIMRG---GAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQGAITFKIIPGSK 89 (93)
T ss_dssp CCEEEEEECTT---SHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCCEEEEEEEECC--
T ss_pred CCEEEEEECCC---CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeCCC
Confidence 47999999999 999999999999999999999999999999999999999999999987643
No 33
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.04 E-value=3.2e-10 Score=91.82 Aligned_cols=65 Identities=25% Similarity=0.379 Sum_probs=60.5
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPRPT 287 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~~~ 287 (333)
.++||.+|.++ ++|++.|+|++||+|++|||+++.++++.++..+++.+.+.+.|+|.|+....+
T Consensus 35 ~g~~V~~V~~~---s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~~ 99 (113)
T 2g5m_B 35 LGIFVKTVTEG---GAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNTKGRVRFMIGRERPGEQ 99 (113)
T ss_dssp EEEEEEECCTT---SHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHHSCSSCEEEEEECCCCTT
T ss_pred CCEEEEEECCC---CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCeEEEEEEeCCCCCc
Confidence 47999999999 999999999999999999999999999999999999999999999999876543
No 34
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.03 E-value=2.5e-10 Score=89.30 Aligned_cols=62 Identities=18% Similarity=0.297 Sum_probs=55.4
Q ss_pred ccccccCeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEe
Q psy9829 214 FGIILGNKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIR 280 (333)
Q Consensus 214 ~G~~l~~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~ 280 (333)
||+.+..+ +|.++.++ ++|++.| |++||+|++|||+++.+++|+|++++|+.+...|+|+|.
T Consensus 18 ~Gf~i~~g-~I~~v~~g---spA~~aG-l~~GD~Il~VNG~~v~~~~~~evv~llr~~g~~V~L~v~ 79 (82)
T 1r6j_A 18 VGFIFKNG-KITSIVKD---SSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIM 79 (82)
T ss_dssp CCEEEETT-EEEEECTT---SHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEE
T ss_pred eEEEEECC-EEEEecCC---CHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEEEEEE
Confidence 55555444 48999999 9999998 999999999999999999999999999999999999985
No 35
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.03 E-value=4.1e-10 Score=91.98 Aligned_cols=79 Identities=20% Similarity=0.137 Sum_probs=66.7
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
+.+|||.|.||.++|++.+++.++||++|.||| ||+ .+|++||+ +.||+.++.+.+ .++.+++..+
T Consensus 25 ~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~s---------pA~--~gL~~GD~I~~Vng~~v~~~~~~~~~~~l~~~~ 93 (117)
T 2csj_A 25 KRGFGIAVSGGRDNPHFENGETSIVISDVLPGG---------PAD--GLLQENDRVVMVNGTPMEDVLHSFAVQQLRKSG 93 (117)
T ss_dssp SSTTCEEEECCSSCCCCSSCCCBCEEEEECTTS---------SHH--HHBCTTCEEEEESSCBCBTCCHHHHHHHHHHSC
T ss_pred CCccCEEEeCCcCCccccCCCCCEEEEEECCCC---------ccc--ccCCCCCEEEEECCEECCCcCHHHHHHHHhcCC
Confidence 579999999999999998788999999999965 565 45799999 589999999874 4556777788
Q ss_pred CceEEEEEEeecc
Q psy9829 164 NCISAQIKRTHFN 176 (333)
Q Consensus 164 ~~v~L~v~R~~~~ 176 (333)
..+.|.|.|....
T Consensus 94 ~~v~l~v~R~~~~ 106 (117)
T 2csj_A 94 KIAAIVVKRPRKV 106 (117)
T ss_dssp SEEEEEEEEEEEC
T ss_pred CeEEEEEEECCcc
Confidence 9999999986543
No 36
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.03 E-value=4.8e-10 Score=87.96 Aligned_cols=62 Identities=21% Similarity=0.379 Sum_probs=58.0
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
.++||.+|.++ ++|++.|+|++||+|++|||+++.+++++++..+++.+.+.+.|+|.|+..
T Consensus 33 ~g~~V~~V~~~---spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~ 94 (96)
T 1d5g_A 33 GGIYVKAVIPQ---GAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLLEKGQS 94 (96)
T ss_dssp SCCEEEEECTT---SHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHSCCSEEEEEEECCSC
T ss_pred CCEEEEEeCCC---ChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEcCCC
Confidence 47999999999 999999899999999999999999999999999999988999999998764
No 37
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.03 E-value=4.3e-10 Score=90.69 Aligned_cols=63 Identities=22% Similarity=0.344 Sum_probs=59.2
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~ 285 (333)
.++||.+|.++ ++|++.|+|++||+|++|||+++.++++.++..+++.+.+.+.|+|.|+...
T Consensus 32 ~gv~V~~V~~g---spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~~ 94 (106)
T 4amh_A 32 NSIYVTKIIEG---GAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTSDFVYLKVAKPGSG 94 (106)
T ss_dssp CCEEEEEECTT---SHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCCSEEEEEEECCSSS
T ss_pred CCEEEEEECCC---CHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEEeCCCC
Confidence 37999999999 9999999999999999999999999999999999999999999999998643
No 38
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.03 E-value=2.9e-10 Score=88.73 Aligned_cols=62 Identities=18% Similarity=0.276 Sum_probs=57.3
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
.+++|.+|.++ ++|++++.|++||+|++|||+++.+++++|+.++|+.+.+.+.|+|.|...
T Consensus 25 ~~~~I~~V~~g---spA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 86 (88)
T 1kwa_A 25 NHCIVARIMHG---GMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYR 86 (88)
T ss_dssp GGEEEEEECTT---SHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCCEEEEEEEECCCC
T ss_pred CCEEEEEECCC---CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEEEEEECCcC
Confidence 36999999999 999988889999999999999999999999999999998899999988653
No 39
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.03 E-value=4.1e-10 Score=89.30 Aligned_cols=63 Identities=22% Similarity=0.376 Sum_probs=58.6
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~ 285 (333)
.++||.+|.++ ++|++.|+|++||+|++|||+.+.++++.++..+++...+.+.|+|.|+...
T Consensus 37 ~gv~V~~V~~~---spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~ 99 (101)
T 2jik_A 37 SGIYVSRIKEN---GAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAGYAVSLRVQHRLES 99 (101)
T ss_dssp CCEEEEEECTT---SHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHTCCSEEEEEEEEESCC
T ss_pred CCEEEEEECCC---CHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeCCCC
Confidence 47999999999 8998888899999999999999999999999999999888999999998654
No 40
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.03 E-value=5e-10 Score=88.97 Aligned_cols=64 Identities=22% Similarity=0.365 Sum_probs=59.7
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPRP 286 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~~ 286 (333)
.++||.+|.++ ++|++.|+|++||+|++|||+++.++++.++..+++.+.+.+.|+|.|+....
T Consensus 34 ~gv~V~~V~~~---spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~ 97 (102)
T 2i1n_A 34 PGIFITKIIPG---GAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKEAGPVVRLVVRRRQPPP 97 (102)
T ss_dssp CCEEEEEECTT---SHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSCSEEEEEEEEECCCC
T ss_pred CCEEEEEECCC---CHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCCCC
Confidence 47999999999 99999999999999999999999999999999999999999999999987543
No 41
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.02 E-value=6e-10 Score=91.40 Aligned_cols=65 Identities=22% Similarity=0.358 Sum_probs=60.3
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPRPT 287 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~~~ 287 (333)
.++||.+|.++ ++|++.|+|++||+|++|||+++.++++.++..+++.+.+.+.|+|.|+.....
T Consensus 47 ~gv~V~~V~~~---spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~~ 111 (120)
T 2eno_A 47 SGIYVSRIKEN---GAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAGYAVSLRVQHRLQVQN 111 (120)
T ss_dssp CSEEEEEECSS---SHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHHHHCSEEEEEEEEEEECCC
T ss_pred CCEEEEEECCC---ChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCcCCC
Confidence 47999999999 999999999999999999999999999999999999999999999999876543
No 42
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.01 E-value=4.5e-10 Score=89.92 Aligned_cols=64 Identities=20% Similarity=0.322 Sum_probs=58.7
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPRP 286 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~~ 286 (333)
.++||.+|.++ ++|++.|+|++||+|++|||+++.++++.++..+++.+.+.+.|+|.|+....
T Consensus 33 ~gv~V~~V~~~---spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~~~ 96 (105)
T 2awx_A 33 NSIYVTKIIEG---GAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKNTSDFVYLKVAKPTSMY 96 (105)
T ss_dssp CCEEEEEECTT---SHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHSCCSEEEEEEECCCC--
T ss_pred CCEEEEEECCC---CHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEcCCCCC
Confidence 47999999999 99999999999999999999999999999999999999999999999987543
No 43
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.00 E-value=3.2e-10 Score=91.32 Aligned_cols=63 Identities=17% Similarity=0.317 Sum_probs=57.6
Q ss_pred EEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHh-----cCCceEEEEeccCCCCC
Q psy9829 222 IFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDS-----SKEKLSLTIRREVPRPT 287 (333)
Q Consensus 222 IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~-----s~~~v~L~V~R~~~~~~ 287 (333)
+||.+|.++ ++|++.|+|++||+|++|||+++.+++|+||+++|+. ..+.+.|+|.|....+.
T Consensus 34 ~~I~~v~~~---s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~~~i~l~v~r~~~~~~ 101 (103)
T 1ufx_A 34 PRIVTIQRG---GSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTKDRDYIDFLVTEFNSGPS 101 (103)
T ss_dssp CEEEEECTT---SHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHCSSCSEEEEEECCCCCCTT
T ss_pred EEEEEeCCC---ChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcccCCCCeEEEEEEEcccCCC
Confidence 599999999 9999999999999999999999999999999999998 47789999999865543
No 44
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.00 E-value=7.9e-10 Score=86.71 Aligned_cols=63 Identities=25% Similarity=0.330 Sum_probs=58.9
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~ 285 (333)
.++||.+|.++ ++|++.|+|++||+|++|||+++.++++.++..+++.+.+.+.|+|.|+...
T Consensus 29 ~gv~V~~V~~~---spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~ 91 (95)
T 2vwr_A 29 PGVFILDLLEG---GLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQASGERVNLTIARPGKP 91 (95)
T ss_dssp CSEEEEEECTT---SHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEEEESCS
T ss_pred CCEEEEEeCCC---ChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEcCCcC
Confidence 47999999999 9999999999999999999999999999999999999999999999997643
No 45
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.00 E-value=7.6e-10 Score=86.99 Aligned_cols=63 Identities=17% Similarity=0.281 Sum_probs=58.9
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~ 285 (333)
.++||.+|.++ ++|++.|+|++||+|++|||+++.+++++++.++|+...+.+.|+|.|+...
T Consensus 32 ~~~~V~~V~~~---spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~~ 94 (97)
T 2jil_A 32 RPVVITSVRPG---GPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQEAALLIEYDVSE 94 (97)
T ss_dssp EEEEEEEECTT---SHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSCSEEEEEEEEECCC
T ss_pred CCEEEEEECCC---CHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCCc
Confidence 47999999999 9999888899999999999999999999999999999889999999998754
No 46
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=99.00 E-value=6.1e-10 Score=83.99 Aligned_cols=68 Identities=40% Similarity=0.693 Sum_probs=60.2
Q ss_pred ecccccccCeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEecc
Q psy9829 212 IDFGIILGNKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRRE 282 (333)
Q Consensus 212 ~d~G~~l~~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~ 282 (333)
..+|+.+..+++|.++.++ ++|++.|.|++||+|++|||+++.+++++++.++|+...+.+.|+|.|+
T Consensus 13 ~~~g~~~~~gv~V~~v~~~---s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 80 (81)
T 2rcz_A 13 EEYGLRLASHIFVKEISQD---SLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQRD 80 (81)
T ss_dssp CCCCEEEEEEEEEEEECTT---SHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEEEEEC-
T ss_pred CCCCEEEeCCEEEEEECCC---ChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCeEEEEEEeC
Confidence 4566665578999999999 8888887899999999999999999999999999998888999999885
No 47
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.00 E-value=1.5e-09 Score=88.54 Aligned_cols=63 Identities=21% Similarity=0.325 Sum_probs=59.0
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~ 285 (333)
.++||.+|.++ ++|++.|+|++||+|++|||+++.++++.++..+|+.+.+.+.|+|.|....
T Consensus 50 ~gv~V~~V~~~---spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~r~~~~ 112 (117)
T 2ehr_A 50 KGIFIKQVLED---SPAGKTNALKTGDKILEVSGVDLQNASHSEAVEAIKNAGNPVVFIVQSLSST 112 (117)
T ss_dssp CSEEEEEECSS---STTTSSCSCCTTCEEEEESSCBCTTCCHHHHHHHHHTSCSSEEEEECCBSCC
T ss_pred CCEEEEEeCCC---ChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCCC
Confidence 47999999999 9999999999999999999999999999999999999999999999887654
No 48
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.99 E-value=3.7e-10 Score=90.77 Aligned_cols=63 Identities=21% Similarity=0.369 Sum_probs=59.1
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~ 285 (333)
.++||.+|.++ ++|++.|+|++||+|++|||+++.++++.++..+++.+.+.+.|+|.|+..+
T Consensus 42 ~gv~V~~V~~~---spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~ 104 (108)
T 1q7x_A 42 GGIYVKAVIPQ---GAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLLEKGQSP 104 (108)
T ss_dssp CCCBEEEECTT---STHHHHTCCCSSCEEEEETTEECBSCTTSHHHHHHHHTTSEEEEEEECCCCS
T ss_pred CCEEEEEECCC---ChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCcc
Confidence 47999999999 9999999999999999999999999999999999999999999999998654
No 49
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.99 E-value=8.3e-10 Score=85.68 Aligned_cols=70 Identities=39% Similarity=0.660 Sum_probs=60.9
Q ss_pred ecccccccCeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 212 IDFGIILGNKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 212 ~d~G~~l~~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
..+|+.+..+++|.+|.++ ++|++.|+|++||+|++|||+++.+++++++.++|+.+.+.+.|+|.|+..
T Consensus 15 ~~~g~~~~~gv~V~~v~~~---s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~g~ 84 (92)
T 3cyy_A 15 EEYGLRLASHIFVKEISQD---SLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQRDER 84 (92)
T ss_dssp SCCCEEEEEEEEEEEECTT---CHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEEC---
T ss_pred CCCCEEEeCCEEEEEECCC---ChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEeCCc
Confidence 3566666578999999999 888888889999999999999999999999999999988899999998764
No 50
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.99 E-value=5.3e-09 Score=103.95 Aligned_cols=149 Identities=16% Similarity=0.184 Sum_probs=98.3
Q ss_pred CCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcchhhhhhhh--cCCceEEEEEEeeccC------
Q psy9829 107 DPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVVGSWQVFRI--AHNCISAQIKRTHFNY------ 177 (333)
Q Consensus 107 D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~~a~~alr~--~g~~v~L~v~R~~~~~------ 177 (333)
..|++|+.|.|||. |+. .+|++||+ +.+|+..+.+......++.. .+..++|.|.|.....
T Consensus 262 ~~G~~V~~V~~~sp---------A~~-aGL~~GD~I~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l 331 (436)
T 4a8c_A 262 QRGAFVSEVLPGSG---------SAK-AGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKPLEVEVTL 331 (436)
T ss_pred CcceEEEEECCCCh---------HHH-CCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEE
Confidence 47999999999764 444 34799999 58999999887655455543 4678999998832111
Q ss_pred -CCCCCCCCCCCCCceeEEeeecCCCccccccceeecccc-cccCeEEEEEEccCcccCccccCCCCCCCCEEEEeCCcc
Q psy9829 178 -DQPEKGEMSFRKGDVFHVIDTLHNGVVGSWQVFRIDFGI-ILGNKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHP 255 (333)
Q Consensus 178 -~~p~~~~l~~~~g~~~hv~~sl~~~~lG~~~~~~~d~G~-~l~~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~ 255 (333)
..+.... .. . .+..+..+.. . .++.. ....+++|.+|.++ ++|++.| |++||+|++|||+.
T Consensus 332 ~~~~~~~~---~~-~------~~~~gl~~~~--~-~~~~~~~~~~gv~V~~V~~~---spA~~aG-L~~GD~I~~vng~~ 394 (436)
T 4a8c_A 332 DTSTSSSA---SA-E------MITPALEGAT--L-SDGQLKDGGKGIKIDEVVKG---SPAAQAG-LQKDDVIIGVNRDR 394 (436)
T ss_pred CCCCcccc---cc-c------ccccCceeee--c-ccccccCCCCCEEEEEeCCC---CHHHHcC-CCCCCEEEEECCEE
Confidence 0000000 00 0 0000000000 0 00000 01147999999999 8887776 99999999999998
Q ss_pred CCCCCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 256 TDGMSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 256 ~~~~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
+. +.+|.+++|+...+.+.|+|.|+..
T Consensus 395 v~--~~~~~~~~l~~~~~~v~l~v~R~g~ 421 (436)
T 4a8c_A 395 VN--SIAEMRKVLAAKPAIIALQIVRGNE 421 (436)
T ss_pred CC--CHHHHHHHHHhCCCeEEEEEEECCE
Confidence 76 5799999999988899999999864
No 51
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=98.99 E-value=7e-10 Score=91.26 Aligned_cols=62 Identities=23% Similarity=0.406 Sum_probs=58.3
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
.++||++|.++ ++|++.|+|++||+|++|||+++.+++++++..+|+.+.+.|.|+|.|+..
T Consensus 53 ~gv~V~~V~~~---spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~g~ 114 (117)
T 2fne_A 53 LPIYVKTVFAK---GAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSDE 114 (117)
T ss_dssp EEEEEEEECTT---SHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEEECSC
T ss_pred CCEEEEEECCC---ChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 47999999999 999999999999999999999999999999999999999999999999753
No 52
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.99 E-value=6.6e-10 Score=90.99 Aligned_cols=62 Identities=16% Similarity=0.305 Sum_probs=58.8
Q ss_pred eEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCC
Q psy9829 221 KIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 285 (333)
Q Consensus 221 ~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~ 285 (333)
++||.+|.++ ++|++.|+|++||+|++|||+++.++++.|+..+|+.+.+.+.|+|.|+...
T Consensus 50 g~~V~~v~~~---s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~~ 111 (117)
T 1ujd_A 50 GAYIAKILPG---GSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQSIISQQSGEAEICVRLDLNM 111 (117)
T ss_dssp EEEEEEECTT---CHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHSCCSSCEEEEEESSCCC
T ss_pred CEEEEEECCC---CHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEEEEEEECCcc
Confidence 6999999999 9999999999999999999999999999999999999999999999998653
No 53
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.99 E-value=7.3e-10 Score=88.69 Aligned_cols=62 Identities=24% Similarity=0.343 Sum_probs=58.2
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
.++||.+|.++ ++|++.|.|++||+|++|||+++.++++.++..+|+.+.+.+.|+|.|+..
T Consensus 38 ~gv~V~~V~~~---spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~ 99 (105)
T 1wha_A 38 AGIFVSRIAEG---GAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTAASPTIALLLEREAG 99 (105)
T ss_dssp CSCEEEECCTT---SSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHTSCCSCEEEEEEECCC
T ss_pred CCEEEEEeCCC---CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCC
Confidence 47999999999 999999899999999999999999999999999999999999999999763
No 54
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=98.98 E-value=1.6e-09 Score=87.70 Aligned_cols=62 Identities=18% Similarity=0.343 Sum_probs=58.2
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
.+++|.+|.++ ++|++.|+|++||+|++|||+++.++++.++..+++...+.+.|+|.|..+
T Consensus 25 ~gv~V~~V~~g---spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~ 86 (106)
T 2la8_A 25 IGCTIADLIQG---QYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSMEVTRPKP 86 (106)
T ss_dssp SSEEEEECCTT---SCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSCBSCEEEEEEECCS
T ss_pred CCEEEEEECCC---CHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEEeCCC
Confidence 47999999999 999999999999999999999999999999999999999999999998643
No 55
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=98.98 E-value=6.5e-10 Score=89.04 Aligned_cols=62 Identities=16% Similarity=0.244 Sum_probs=57.3
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
.++||.+|.++ ++|++.+.|++||+|++|||+++.+++++|+..+|+.+.+.+.|+|.|...
T Consensus 35 ~~~~V~~V~~~---s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~v~l~v~~~~~ 96 (103)
T 2dc2_A 35 VPILISEIHPG---QPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIEFEVVYVAL 96 (103)
T ss_dssp EEEEEEEECTT---SHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHHCCSEEEEEEEECC-
T ss_pred CCEEEEEECCC---CHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEecCC
Confidence 37999999999 999887789999999999999999999999999999999999999988754
No 56
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=98.97 E-value=8.7e-10 Score=85.82 Aligned_cols=61 Identities=18% Similarity=0.348 Sum_probs=57.6
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREV 283 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~ 283 (333)
.++||.+|.++ ++|++.|+|++||+|++|||+++.+++++++..+++.+.+.+.|+|.|..
T Consensus 29 ~gv~V~~V~~~---spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~ 89 (92)
T 2qg1_A 29 TGVFVSDIVKG---GIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSLGTVTLEVGRIS 89 (92)
T ss_dssp CSCEEEEECTT---SHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEECCC
T ss_pred CCEEEEEECCC---CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEccc
Confidence 47999999999 99999999999999999999999999999999999999999999999875
No 57
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=98.97 E-value=1.7e-09 Score=90.17 Aligned_cols=64 Identities=20% Similarity=0.307 Sum_probs=58.5
Q ss_pred eEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhc--CCceEEEEeccCCCCC
Q psy9829 221 KIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS--KEKLSLTIRREVPRPT 287 (333)
Q Consensus 221 ~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s--~~~v~L~V~R~~~~~~ 287 (333)
++||.+|.++ ++|++.|+|++||+|++|||+++.+++++|+.++|+.+ .+.+.|+|.|+...+.
T Consensus 44 ~v~V~~V~~~---spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~~~ 109 (129)
T 2kpk_A 44 FLQIKSLVLD---GPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYPLPF 109 (129)
T ss_dssp EEEEEEECTT---SHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTEEEEEEEEECSCCSS
T ss_pred CEEEEEECCC---ChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCCCCC
Confidence 5999999999 99999999999999999999999999999999999998 5789999999865433
No 58
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=98.97 E-value=9.1e-10 Score=85.92 Aligned_cols=61 Identities=21% Similarity=0.350 Sum_probs=57.0
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREV 283 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~ 283 (333)
.++||.+|.++ ++|++.|+|++||+|++|||+++.++++.++..+++.+.+.+.|+|.|+.
T Consensus 33 ~gv~V~~V~~~---spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~g 93 (94)
T 2fe5_A 33 NSIYITKIIEG---GAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG 93 (94)
T ss_dssp CCEEEEEECTT---SHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHTCCSEEEEEEECCC
T ss_pred CCEEEEEECCC---ChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEcCC
Confidence 47999999999 99998888999999999999999999999999999999899999998864
No 59
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=98.97 E-value=9.4e-10 Score=88.08 Aligned_cols=60 Identities=23% Similarity=0.277 Sum_probs=55.9
Q ss_pred CeEEEEEEccCcccCccccCC-CCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCC----ceEEEEecc
Q psy9829 220 NKIFVKEVTHRLDNNASAGTH-QLAEGDVLLKINNHPTDGMSVKEARKLIDSSKE----KLSLTIRRE 282 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg-~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~----~v~L~V~R~ 282 (333)
.++||.+|.++ ++|++.| +|++||+|++|||+++.++++.++..+|+.+.+ .|.|+|.|+
T Consensus 43 ~~~~V~~V~~~---spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~~~~~v~l~v~r~ 107 (107)
T 3nfk_A 43 MPVIVSRVAPG---TPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRPN 107 (107)
T ss_dssp EEEEEEEECTT---SHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGGGSBTTBEEEEEECC
T ss_pred CCeEEEEECCC---CchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhccccCCcEEEEEEEcC
Confidence 36999999999 9999998 699999999999999999999999999999986 999999874
No 60
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A
Probab=98.97 E-value=2.2e-10 Score=102.08 Aligned_cols=85 Identities=12% Similarity=0.178 Sum_probs=74.8
Q ss_pred CCcCCCCCCCCeeehHHHHHHHHcCCEEEEecCcccccccccc-ccccEEEEEecCchhhHH-hhhcCCCcchhhHHHHH
Q psy9829 2 MEESDSKKCSGIIRLSAIRDMMDRGRHGLLDITPNAVDRLNYA-QFYPIVIFLRAETKSNVK-ELRAGIPKYHTNLARQR 79 (333)
Q Consensus 2 ~~~~~~~~~~~~tsl~sVr~V~e~gkhCILDv~~~avk~L~~~-~l~PivIfIkp~s~~~lk-~lr~~~~Es~~ki~~ra 79 (333)
+|-....+++++|+.++|++++++|++||||++.+++++++.. .+.|++|||.|||.+.|+ +|+.|.+++.+.+..|.
T Consensus 68 lE~~~~~g~~YGt~~~~v~~~l~~g~~vil~id~~g~~~~k~~~~~~~~~Ifi~pps~e~L~~RL~~Rg~e~~e~i~~Rl 147 (186)
T 1ex7_A 68 IEWAQFSGNYYGSTVASVKQVSKSGKTCILDIDMQGVKSVKAIPELNARFLFIAPPSVEDLKKRLEGRGTETEESINKRL 147 (186)
T ss_dssp EEEEEETTEEEEEEHHHHHHHHHHTSEEEEECCHHHHHHHHTCGGGCCEEEEEECSCHHHHHHHHHHHCCSCHHHHHHHH
T ss_pred EEEEEEcCceeeeecceeeehhhCCCEEEecCCHHHHHHHHHhcccCceEEEEeCCCHHHHHHHHHhcCCCCHHHHHHHH
Confidence 3555667889999999999999999999999999999999985 788999999999999988 88889889888888888
Q ss_pred hhccccc
Q psy9829 80 SRVLFPV 86 (333)
Q Consensus 80 er~~qE~ 86 (333)
.++..|.
T Consensus 148 ~~a~~e~ 154 (186)
T 1ex7_A 148 SAAQAEL 154 (186)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7766554
No 61
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.96 E-value=8.8e-10 Score=90.60 Aligned_cols=61 Identities=20% Similarity=0.308 Sum_probs=56.4
Q ss_pred eEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhc----CCceEEEEeccCC
Q psy9829 221 KIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS----KEKLSLTIRREVP 284 (333)
Q Consensus 221 ~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s----~~~v~L~V~R~~~ 284 (333)
.+||.+|.++ ++|++.|.|++||+|++|||+++.+++|+||+++|+.. .+.++|+|.|..+
T Consensus 44 ~i~I~~V~~g---spA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~g~~v~l~v~r~~~ 108 (118)
T 1v6b_A 44 KVVVSAVYEG---GAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQGGDWIDLVVAVCPP 108 (118)
T ss_dssp SEEEEECCTT---SHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHHTCSEEEEEEECCCS
T ss_pred CEEEEEECCC---CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhcCCCeEEEEEEeCCc
Confidence 4999999999 99999989999999999999999999999999999876 6799999999653
No 62
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.96 E-value=1.4e-09 Score=85.54 Aligned_cols=63 Identities=22% Similarity=0.347 Sum_probs=58.5
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~ 285 (333)
.++||.+|.++ ++|++.|+|++||+|++|||+++.++++.++..+++.+.+.+.|+|.|+...
T Consensus 30 ~gv~V~~V~~~---spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~~ 92 (98)
T 2opg_A 30 GAIIIHEVYEE---GAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTPQRVRLTLYRDEAP 92 (98)
T ss_dssp CSEEEEEECTT---SHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEECSSC
T ss_pred CCEEEEEECCC---ChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEcCCCC
Confidence 37999999999 8999888999999999999999999999999999999889999999997654
No 63
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=98.95 E-value=9.8e-10 Score=84.66 Aligned_cols=59 Identities=17% Similarity=0.280 Sum_probs=54.7
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEec
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRR 281 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R 281 (333)
.++||.+|.++ ++|++.+.|++||+|++|||+++.++++.++..+++.+.+.+.|+|.+
T Consensus 28 ~~~~V~~V~~g---spA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~~ 86 (87)
T 4e34_A 28 VPILISEIHPG---QPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIEFEVVY 86 (87)
T ss_dssp EEEEEEEECTT---SHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEEE
T ss_pred CCEEEEEECCC---CHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 46999999999 898887789999999999999999999999999999999999998864
No 64
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.95 E-value=2.6e-09 Score=88.14 Aligned_cols=64 Identities=27% Similarity=0.356 Sum_probs=58.4
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhc--CCceEEEEeccCCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS--KEKLSLTIRREVPRP 286 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s--~~~v~L~V~R~~~~~ 286 (333)
.++||.+|.++ ++|++.|+|++||+|++|||+.+.+++++|+.++|+.. .+.+.|+|.|+.+..
T Consensus 44 ~gv~V~~V~~~---spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~~ 109 (123)
T 1ueq_A 44 EFLQVKSVIPD---GPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPIGQSVNLVLCRGYPLP 109 (123)
T ss_dssp CCCEEEEECTT---SHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEESCCCC
T ss_pred CCEEEEEECCC---CHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCCCC
Confidence 36999999999 99999999999999999999999999999999999995 589999999986543
No 65
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.95 E-value=1.2e-09 Score=87.10 Aligned_cols=64 Identities=27% Similarity=0.443 Sum_probs=58.7
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPRP 286 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~~ 286 (333)
.+++|.+|.++ ++|++.|+|++||+|++|||+.+.++++.++..+++...+.+.|+|.|+...+
T Consensus 38 ~~v~V~~V~~~---spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~ 101 (104)
T 2djt_A 38 TPLAVRGLLKD---GPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRRPLSGP 101 (104)
T ss_dssp CCCEEEEECTT---CHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHHTCSEEEEEECCCCCCC
T ss_pred CCEEEEEECCC---CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCCCC
Confidence 46999999999 88888888999999999999999999999999999998899999999986544
No 66
>4dey_A Voltage-dependent L-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 1.95A {Oryctolagus cuniculus} PDB: 4dex_A 1t3l_A 1t3s_A 1vyv_A 1vyu_A 1vyt_A 1t0h_B 1t0j_B 1t0h_A 1t0j_A
Probab=98.95 E-value=4.6e-10 Score=108.69 Aligned_cols=82 Identities=12% Similarity=0.107 Sum_probs=66.5
Q ss_pred eehHHHHHHHHcCCEEEEecCcc-ccccccccccccEEEEEecCchhhHH-hhhcCCCcchhhHHHHH---hhccccccc
Q psy9829 14 IRLSAIRDMMDRGRHGLLDITPN-AVDRLNYAQFYPIVIFLRAETKSNVK-ELRAGIPKYHTNLARQR---SRVLFPVGS 88 (333)
Q Consensus 14 tsl~sVr~V~e~gkhCILDv~~~-avk~L~~~~l~PivIfIkp~s~~~lk-~lr~~~~Es~~ki~~ra---er~~qE~G~ 88 (333)
+.+++|.+++++||+|||||+.| ++++|+...++|++|||+|||.+.|+ +|+.|.++..+.+..+. +.++++...
T Consensus 217 seVe~i~~v~~~Gk~vILDIDvQnGa~qlk~~~~~~i~IFI~PPS~eeLe~RL~~RGt~~~~rl~~al~~ae~E~~~~~~ 296 (337)
T 4dey_A 217 SEIERIFELARTLQLVVLDADTINHPAQLSKTSLAPIVVYVKISSPKVLQRLIKSRGKSQAKHLNVQMVAADKLAQCPPE 296 (337)
T ss_dssp HHHHHHHHHTTTCCEEEEEETTCCSGGGTTTSSCCCEEEEECCSCHHHHHHHHHTTCHHHHTTHHHHHHHHHHHHHSCGG
T ss_pred hHHHHHHHHHhCCCEEEEEeCcHHHHHHHHhcCCCCEEEEEECcCHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhCcc
Confidence 36777777888999999999998 99999999999999999999999999 67888887666666653 333445556
Q ss_pred eeeEEEe
Q psy9829 89 TFVGSVL 95 (333)
Q Consensus 89 ~~g~~i~ 95 (333)
.|...|.
T Consensus 297 ~FDyvIV 303 (337)
T 4dey_A 297 LFDVILD 303 (337)
T ss_dssp GCSEEEC
T ss_pred cCCEEEE
Confidence 7777776
No 67
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=98.95 E-value=7.3e-10 Score=89.33 Aligned_cols=77 Identities=13% Similarity=0.123 Sum_probs=63.7
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
..+|||+|+||.|.+..+ ++.+++|++|.|||.| +..++|++||+ +.||+.++.+.+ .++.+++..+
T Consensus 12 ~~~~Gf~i~gG~~~~~~~-~~~gv~V~~V~~gspA---------~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 81 (106)
T 4amh_A 12 SKGLGFSIAGGVGNQHWP-GDNSIYVTKIIEGGAA---------HKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTS 81 (106)
T ss_dssp CCCSCEEEEECTTSCSBT-TBCCEEEEEECTTSHH---------HHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCC
T ss_pred CCccCEEEEeccCCcccc-CCCCEEEEEECCCCHH---------HHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCC
Confidence 569999999999999875 6899999999997754 44334799999 589999998874 4566777788
Q ss_pred CceEEEEEEe
Q psy9829 164 NCISAQIKRT 173 (333)
Q Consensus 164 ~~v~L~v~R~ 173 (333)
..++|.|.|.
T Consensus 82 ~~v~l~v~R~ 91 (106)
T 4amh_A 82 DFVYLKVAKP 91 (106)
T ss_dssp SEEEEEEECC
T ss_pred CeEEEEEEeC
Confidence 8999999884
No 68
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.95 E-value=1.8e-09 Score=87.06 Aligned_cols=63 Identities=16% Similarity=0.359 Sum_probs=58.5
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~ 285 (333)
.++||.+|.++ ++|++.|+|++||+|++|||+.+.+++++++..+|+.+.+.+.|+|.|+...
T Consensus 38 ~g~~V~~V~~~---spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~~ 100 (111)
T 2dlu_A 38 SGVVVRTIVPG---GLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCGNSVRMLVARDPAG 100 (111)
T ss_dssp SSBEEEEECTT---SSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHHCSEEEEEEEESCTT
T ss_pred CCEEEEEECCC---CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeCCCC
Confidence 46999999999 8999888899999999999999999999999999999999999999997654
No 69
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.94 E-value=1.8e-09 Score=85.13 Aligned_cols=63 Identities=24% Similarity=0.404 Sum_probs=58.1
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~ 285 (333)
.+++|.+|.++ ++|++.|+|++||+|++|||+.+.+++++++..+|+...+.+.|+|.|+...
T Consensus 30 ~~~~V~~V~~~---spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~~ 92 (97)
T 1n7e_A 30 DPIIISSLTKG---GLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQTDA 92 (97)
T ss_dssp SCCEEEEECTT---SHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEECCCCC
T ss_pred CCEEEEEECCC---CHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCCC
Confidence 46999999999 8999888899999999999999999999999999998888999999997654
No 70
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.94 E-value=7.9e-10 Score=90.04 Aligned_cols=63 Identities=25% Similarity=0.393 Sum_probs=58.8
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCC-CCCHHHHHHHHHhcCCceEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTD-GMSVKEARKLIDSSKEKLSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~-~~s~~eA~~~l~~s~~~v~L~V~R~~~~ 285 (333)
.++||.+|.++ ++|++.|+|++||+|++|||+++. +++++++..+|+.+.+.+.|+|.|+...
T Consensus 49 ~gv~V~~V~~~---spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~~~~~v~l~v~R~~~~ 112 (117)
T 2o2t_A 49 LGIFVQEIQEG---SVAHRDGRLKETDQILAINGQALDQTITHQQAISILQKAKDTVQLVIARGSLP 112 (117)
T ss_dssp EEEEECCCCTT---SHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHHCCSEEEEEEESSCCG
T ss_pred CCEEEEEECCC---CHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcCCCEEEEEEEeCCcc
Confidence 47999999999 999999999999999999999998 9999999999999999999999998643
No 71
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=98.94 E-value=8.9e-10 Score=87.05 Aligned_cols=63 Identities=17% Similarity=0.338 Sum_probs=58.2
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~ 285 (333)
.+++|.+|.++ ++|++.|+|++||+|++|||+++.++++.++..+++...+.+.|+|.|..+.
T Consensus 31 ~gv~V~~V~~~---spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~p~ 93 (96)
T 2qkv_A 31 IGCTIADLIQG---QYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKGANGKVSMEVTRPKPA 93 (96)
T ss_dssp SSEEEEEECTT---SCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEECCCC-
T ss_pred CcEEEEEeCCC---ChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEEEEEEeCCcc
Confidence 47999999999 9999998999999999999999999999999999999999999999987543
No 72
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=98.94 E-value=7.3e-10 Score=85.94 Aligned_cols=60 Identities=22% Similarity=0.421 Sum_probs=55.7
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCC--ceEEEEecc
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKE--KLSLTIRRE 282 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~--~v~L~V~R~ 282 (333)
.++||.+|.++ ++|++.|+|++||+|++|||+++.++++.++..+|+.+.. .+.|+|.|.
T Consensus 27 ~~~~V~~V~~~---spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~v~l~v~R~ 88 (90)
T 2q9v_A 27 EPIYIGHIVPL---GAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRQT 88 (90)
T ss_dssp SCEEEEEECTT---SHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEEC
T ss_pred CCEEEEEECCC---ChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEec
Confidence 46999999999 9999999999999999999999999999999999999865 899999885
No 73
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.93 E-value=1.4e-09 Score=84.61 Aligned_cols=62 Identities=21% Similarity=0.378 Sum_probs=57.2
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
.+++|.+|.++ ++|++.|.|++||+|++|||+++.+++++++..+++.+.+.+.|+|.|+..
T Consensus 30 ~~~~V~~V~~~---spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~~~ 91 (93)
T 2dkr_A 30 SPIYISRVIPG---GVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQGSVKLVVRSGPS 91 (93)
T ss_dssp CCCEEEEECTT---SHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCCSEEEEEECCCCS
T ss_pred CCEEEEEECCC---CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEeCCC
Confidence 47999999999 888888789999999999999999999999999999998999999988753
No 74
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.93 E-value=2.7e-09 Score=85.03 Aligned_cols=61 Identities=20% Similarity=0.328 Sum_probs=56.6
Q ss_pred eEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHh--cCCceEEEEeccCC
Q psy9829 221 KIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDS--SKEKLSLTIRREVP 284 (333)
Q Consensus 221 ~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~--s~~~v~L~V~R~~~ 284 (333)
++||.+|.++ ++|++.+.|++||+|++|||+++.+++++|+.++|+. ..+.+.|+|.|..+
T Consensus 38 ~~~V~~V~~~---spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~p 100 (101)
T 2yt7_A 38 TAVIANLLHG---GPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRETKSQTSVTLSIVHCPP 100 (101)
T ss_dssp CEEEEEECTT---STTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHTTTSSEEEEEECCCCC
T ss_pred CEEEEEECCC---CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCC
Confidence 5999999999 9999989999999999999999999999999999998 67899999988654
No 75
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.93 E-value=3.9e-09 Score=94.82 Aligned_cols=155 Identities=14% Similarity=0.048 Sum_probs=92.8
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccC-CE-EEEceeeccCcchhhhhh-h-hc
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKG-DV-FHVIDTLHNGVVGSWQVF-R-IA 162 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~g-D~-I~Vnd~dv~gv~~a~~al-r-~~ 162 (333)
|.|+|++.+-+.+ +..|++|++|.|||.| +. .+|++| |+ +.+|+..+++......++ + ..
T Consensus 1 g~g~~~~~~~~~~------~~~G~~V~~V~~~SpA---------~~-AGL~~G~D~I~~ing~~v~~~~~~~~~~~~~~~ 64 (209)
T 3rle_A 1 GMGSSQSVEIPGG------GTEGYHVLRVQENSPG---------HR-AGLEPFFDFIVSINGSRLNKDNDTLKDLLKANV 64 (209)
T ss_dssp -------CCCTTS------SSEEEEEEEECTTSHH---------HH-TTCCTTTEEEEEETTEECCSSSSHHHHHHHHTT
T ss_pred CcchhhhhhccCC------CCCEEEEEEECCCCHH---------HH-CCCCcCCeEEEEECCEECcCHHHHHHHHHhcCC
Confidence 3566666654332 3569999999998754 43 357999 99 589999988775433332 2 24
Q ss_pred CCceEEEEEEeeccCCCCCCCCCCCCCCceeEEeeecCCCccccccceeecccccc---------cCeEEEEEEccCccc
Q psy9829 163 HNCISAQIKRTHFNYDQPEKGEMSFRKGDVFHVIDTLHNGVVGSWQVFRIDFGIIL---------GNKIFVKEVTHRLDN 233 (333)
Q Consensus 163 g~~v~L~v~R~~~~~~~p~~~~l~~~~g~~~hv~~sl~~~~lG~~~~~~~d~G~~l---------~~~IfI~~I~~g~~a 233 (333)
+..++|.|.|..... ...+. +.... .|. ....+|+.+ ..+++|.+|.++
T Consensus 65 g~~v~l~v~R~~~~~--------------~~~v~--l~p~~--~~~-~~~~lGi~~~~~~~~~~~~~Gv~V~~V~~~--- 122 (209)
T 3rle_A 65 EKPVKMLIYSSKTLE--------------LRETS--VTPSN--LWG-GQGLLGVSIRFCSFDGANENVWHVLEVESN--- 122 (209)
T ss_dssp TSCEEEEEEETTTCC--------------EEEEE--ECCCS--SSS-SSSSSCEEEEEEECTTGGGSCEEEEEECTT---
T ss_pred CCEEEEEEEecCCce--------------EEEEE--Ecccc--ccc-ccCccceEEeecChhHccccceEEEEeCCC---
Confidence 677999998732110 00000 00000 000 001112211 147899999999
Q ss_pred CccccCCCCCC-CCEEEEeCCccCCCCCHHHHHHHHHhc-CCceEEEEeccC
Q psy9829 234 NASAGTHQLAE-GDVLLKINNHPTDGMSVKEARKLIDSS-KEKLSLTIRREV 283 (333)
Q Consensus 234 g~Aa~dg~L~~-GD~Il~ING~~~~~~s~~eA~~~l~~s-~~~v~L~V~R~~ 283 (333)
++|++.| |++ ||+|++|||. . .+.++..++|+.. .+.+.|.|.|..
T Consensus 123 spA~~aG-l~~~GD~I~~ing~-v--~~~~~l~~~l~~~~g~~v~l~v~r~~ 170 (209)
T 3rle_A 123 SPAALAG-LRPHSDYIIGADTV-M--NESEDLFSLIETHEAKPLKLYVYNTD 170 (209)
T ss_dssp SHHHHHT-CCTTTEEEEEESSC-C--CSSSCHHHHHHHTTTSCEEEEEEETT
T ss_pred ChHHHCC-CCCCCCEEEECCCE-e--CCHHHHHHHHHhCCCCeEEEEEEECC
Confidence 7777654 999 9999999996 3 3456666777765 668999998864
No 76
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.93 E-value=3.3e-09 Score=84.88 Aligned_cols=77 Identities=18% Similarity=0.173 Sum_probs=63.1
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcchh--hhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVVGS--WQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~~a--~~alr~~g 163 (333)
+.||||.+.||.++|++.+++.+++|++|.||| ||+ .+|++||+ +.||+..+.+.... +..++..+
T Consensus 18 ~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~s---------pA~--agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 86 (107)
T 2h2b_A 18 GFGFGIAISGGRDNPHFQSGETSIVISDVLKGG---------PAE--GQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSG 86 (107)
T ss_dssp TTBTCEEEEECTTSCCTTTCCCCEEEEEECTTS---------TTB--TTBCTTCEEEEETTEECTTCCHHHHHHHHHTCC
T ss_pred CCccCEEEecCcCCCcccCCCCCEEEEEECCCC---------chh--hCCCCCCEEEEECCEECCCccHHHHHHHhhCCC
Confidence 579999999999999998889999999999976 455 35799999 58999999988533 33345567
Q ss_pred CceEEEEEEee
Q psy9829 164 NCISAQIKRTH 174 (333)
Q Consensus 164 ~~v~L~v~R~~ 174 (333)
..+.|.|.|..
T Consensus 87 ~~v~l~v~R~~ 97 (107)
T 2h2b_A 87 KNAKITIRRKK 97 (107)
T ss_dssp SEEEEEEEEES
T ss_pred CEEEEEEEECC
Confidence 88999998843
No 77
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.92 E-value=1.9e-09 Score=86.84 Aligned_cols=61 Identities=18% Similarity=0.334 Sum_probs=57.7
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREV 283 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~ 283 (333)
.++||.+|.++ ++|++.|+|++||+|++|||+++.++++.++..+++.+.+.+.|+|.|+.
T Consensus 36 ~gv~V~~V~~~---spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~ 96 (110)
T 1um1_A 36 PGLYIQTLLPG---SPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHGGKKMRFLVAKSD 96 (110)
T ss_dssp SSEEEEEECTT---SHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTCCSEEEEEEECCC
T ss_pred CCEEEEEECCC---ChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 47999999999 99999999999999999999999999999999999999999999999974
No 78
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=98.92 E-value=1.8e-09 Score=83.85 Aligned_cols=59 Identities=19% Similarity=0.302 Sum_probs=55.7
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEec
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRR 281 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R 281 (333)
.++||.+|.++ ++|++.|.|++||+|++|||+++.++++.++..+++.+.+.+.|+|.|
T Consensus 30 ~g~~V~~V~~~---spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~v~l~v~r 88 (90)
T 1qav_A 30 MPILISKIFKG---LAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKY 88 (90)
T ss_dssp EEEEEEEECTT---SHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEE
T ss_pred CCEEEEEECCC---CHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEE
Confidence 47999999999 999988889999999999999999999999999999999999999977
No 79
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.92 E-value=1.8e-09 Score=89.84 Aligned_cols=62 Identities=21% Similarity=0.328 Sum_probs=58.4
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
.++||++|.++ ++|++.|.|++||+|++|||+++.+++++++..+|+.+.+.+.|+|.|...
T Consensus 65 ~gv~V~~V~~~---spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 126 (128)
T 1nf3_C 65 PGIFISRLVPG---GLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPANQ 126 (128)
T ss_dssp EEEEEEEECTT---CHHHHHTCCCTTCEEEEETTEESTTCCHHHHHHHHHHTTTSEEEEEECCCC
T ss_pred CCEEEEEECCC---CHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCc
Confidence 57999999999 999999999999999999999999999999999999999999999998764
No 80
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.92 E-value=1.9e-09 Score=83.51 Aligned_cols=61 Identities=25% Similarity=0.356 Sum_probs=56.2
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
.+++|.+|.++ ++|++.| |++||+|++|||+++.++++.++..+++.+.+.+.|+|.|+..
T Consensus 27 ~~v~V~~V~~~---spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~ 87 (89)
T 2q3g_A 27 VPLSISRLTPG---GKAAQAG-VAVGDWVLSIDGENAGSLTHIEAQNKIRACGERLSLGLSRAIT 87 (89)
T ss_dssp EEEEEEEECTT---SHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHTCTTEEEEEEEEECC
T ss_pred CCEEEEEECCC---CHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEEEeCCC
Confidence 47999999999 8888877 9999999999999999999999999999988999999998764
No 81
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=98.92 E-value=1.3e-09 Score=89.47 Aligned_cols=78 Identities=13% Similarity=0.122 Sum_probs=64.0
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
..||||+|.||.+.+..+ ++.+++|++|.+||.| +..++|++||+ +.||++++.+++ .++.+++.++
T Consensus 34 ~~glG~~i~gg~~~~~~~-~~~gv~V~~V~~gspA---------~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g 103 (117)
T 2byg_A 34 PKGLGFSIAGGVGNQHIP-GDNSIYVTKIIDGGAA---------QKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNTS 103 (117)
T ss_dssp TTBSSEEEEECTTSCSBT-TBCCEEEEEECTTSHH---------HHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCC
T ss_pred CCCcCEEEEcccCCCCcc-CCCCEEEEEECCCCHH---------HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 369999999999999875 6889999999997754 44334799999 689999999875 5566777788
Q ss_pred CceEEEEEEee
Q psy9829 164 NCISAQIKRTH 174 (333)
Q Consensus 164 ~~v~L~v~R~~ 174 (333)
..++|.|.|..
T Consensus 104 ~~v~l~v~R~~ 114 (117)
T 2byg_A 104 EVVYLKVGKPT 114 (117)
T ss_dssp SEEEEEEEEEE
T ss_pred CeEEEEEEeCC
Confidence 88999998853
No 82
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=98.92 E-value=2.5e-09 Score=84.83 Aligned_cols=78 Identities=15% Similarity=0.120 Sum_probs=63.8
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
..||||++.||.|.|+.. ++.++||++|.+||.| +..+.|++||+ +.||+..+.+.+ .++.+++..+
T Consensus 14 ~~glG~~i~~g~~~~~~~-~~~gv~V~~V~~~spA---------~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 83 (102)
T 2i1n_A 14 NSGLGFSIAGGIDNPHVP-DDPGIFITKIIPGGAA---------AMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKEAG 83 (102)
T ss_dssp TTBTSEEEEECTTSCSST-TCCCEEEEEECTTSHH---------HHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSC
T ss_pred CCcCCEEEEcccCCCCcC-CCCCEEEEEECCCCHH---------HHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 569999999999999875 6899999999997654 43333799999 689999999865 4556677788
Q ss_pred CceEEEEEEee
Q psy9829 164 NCISAQIKRTH 174 (333)
Q Consensus 164 ~~v~L~v~R~~ 174 (333)
..+.|.|.|..
T Consensus 84 ~~v~l~v~R~~ 94 (102)
T 2i1n_A 84 PVVRLVVRRRQ 94 (102)
T ss_dssp SEEEEEEEEEC
T ss_pred CeEEEEEEeCC
Confidence 89999998854
No 83
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.91 E-value=1.7e-09 Score=89.25 Aligned_cols=62 Identities=29% Similarity=0.384 Sum_probs=58.3
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
.++||.+|.++ ++|++.|+|++||+|++|||+++.++++.++..+++.+.+.+.|+|.|+..
T Consensus 51 ~gv~V~~V~~~---spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~ 112 (124)
T 2daz_A 51 MSIFVVGINPE---GPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTAPSKVKLVFIRNED 112 (124)
T ss_dssp CCEEEEEECTT---SHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHSCSEEEEEEEECTT
T ss_pred CCEEEEEECCC---CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCC
Confidence 47999999999 999999999999999999999999999999999999999999999999754
No 84
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=98.91 E-value=1.9e-09 Score=84.78 Aligned_cols=61 Identities=21% Similarity=0.286 Sum_probs=56.8
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREV 283 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~ 283 (333)
.++||.+|.++ ++|++.|+|++||+|++|||+++.++++.++..+|+...+.+.|+|.|+.
T Consensus 37 ~g~~V~~V~~~---spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~g 97 (98)
T 1ihj_A 37 TGIFIKGIVPD---SPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQTFD 97 (98)
T ss_dssp EEEEEEEECTT---SHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEEEC-
T ss_pred CCEEEEEECCC---CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCeEEEEEEeCC
Confidence 47999999999 99988888999999999999999999999999999999999999999974
No 85
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.91 E-value=5.3e-10 Score=90.38 Aligned_cols=64 Identities=23% Similarity=0.334 Sum_probs=59.4
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPRP 286 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~~ 286 (333)
.++||.+|.++ ++|++.|+|++||+|++|||+++.+++++|+..+|+.+.+.+.|+|.|...+.
T Consensus 44 ~gv~V~~V~~~---spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~~~ 107 (111)
T 1uju_A 44 EGIFISKVSPT---GAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLLRSVGDTLTVLVCDGFESG 107 (111)
T ss_dssp CCCEEEEECTT---SHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHHHSSCSSEEEECCCCCCCCS
T ss_pred CCEEEEEECCC---CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCCCC
Confidence 47999999999 99999999999999999999999999999999999999999999999986543
No 86
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=98.91 E-value=2.1e-09 Score=82.47 Aligned_cols=59 Identities=19% Similarity=0.287 Sum_probs=54.4
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhc--CCceEEEEec
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS--KEKLSLTIRR 281 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s--~~~v~L~V~R 281 (333)
.++||.++.++ ++|++.|+|++||+|++|||+++.+++++++.++|+.+ .+.+.|+|.|
T Consensus 25 ~~~~V~~v~~~---spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 85 (85)
T 2i04_A 25 EFLQIKSLVLD---GPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCR 85 (85)
T ss_dssp BCEEEEEECTT---SHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCEEEEEEEC
T ss_pred CCEEEEEECCC---ChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEC
Confidence 36999999999 89988888999999999999999999999999999988 5789999876
No 87
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.91 E-value=4e-09 Score=85.69 Aligned_cols=63 Identities=17% Similarity=0.200 Sum_probs=57.9
Q ss_pred eEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCCC
Q psy9829 221 KIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPRP 286 (333)
Q Consensus 221 ~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~~ 286 (333)
+++|.+|.++ ++|++++.|++||+|++|||+.+.+++++|+.++|+...+.+.|+|.|+....
T Consensus 44 ~~~V~~V~~~---spA~~~agL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~~~ 106 (114)
T 1uew_A 44 PHKIGRIIDG---SPADRCAKLKVGDRILAVNGQSIINMPHADIVKLIKDAGLSVTLRIIPQEELN 106 (114)
T ss_dssp SCEEEEECTT---CTTGGGSSCCTTCBEEEETTBCTTTSCHHHHHHHHHHTTTEEEEEECCCSCCC
T ss_pred CeEEEEECCC---ChHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCcCC
Confidence 6799999999 99988778999999999999999999999999999998899999999976543
No 88
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.90 E-value=1.8e-09 Score=86.62 Aligned_cols=62 Identities=19% Similarity=0.404 Sum_probs=57.9
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
.+++|.+|.++ ++|++.|+|++||+|++|||+++.+++++++..+|+...+.+.|+|.|+..
T Consensus 44 ~gv~V~~V~~~---spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~ 105 (108)
T 2jre_A 44 TGIYVKSLIPG---SAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLRNAGNPVRLLLIRRLP 105 (108)
T ss_dssp CCCEEEEECTT---SHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHHHHHCSEEEEEEEECCC
T ss_pred CCEEEEEeCCC---CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 47999999999 899888889999999999999999999999999999988999999998764
No 89
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.90 E-value=3.2e-09 Score=81.88 Aligned_cols=60 Identities=25% Similarity=0.399 Sum_probs=55.7
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREV 283 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~ 283 (333)
.+++|.+|.++ ++|++.| |++||+|++|||+++.++++.++..+++...+.+.|+|.|+.
T Consensus 27 ~~~~V~~V~~~---spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g 86 (88)
T 2uzc_A 27 MPLTISSLKDG---GKAAQAN-VRIGDVVLSIDGINAQGMTHLEAQNKIKGCTGSLNMTLQRES 86 (88)
T ss_dssp EEEEEEEECTT---SHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEECCC
T ss_pred CCeEEEEECCC---ChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeCC
Confidence 46999999999 8888887 999999999999999999999999999988899999999875
No 90
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.90 E-value=2.2e-09 Score=87.12 Aligned_cols=65 Identities=26% Similarity=0.335 Sum_probs=59.3
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPRPT 287 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~~~ 287 (333)
.++||.+|.++ ++|++.|+|++||+|++|||+.+.+++++++..+|+...+.|.|+|.|+.....
T Consensus 43 ~gv~V~~V~~~---spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~~~~ 107 (116)
T 2dm8_A 43 NAIVIHEVYEE---GAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQTPQKVRLVVYRDEAHYR 107 (116)
T ss_dssp SSEECCCCCSS---SHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTCCSEEEEEEECCSSCCC
T ss_pred CCEEEEEECCC---ChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeCCcccc
Confidence 37999999999 899988899999999999999999999999999999988999999999765433
No 91
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.90 E-value=2.1e-09 Score=85.95 Aligned_cols=80 Identities=13% Similarity=0.099 Sum_probs=64.4
Q ss_pred ccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhc
Q psy9829 86 VGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIA 162 (333)
Q Consensus 86 ~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~ 162 (333)
...+|||.+.||.+.++|..++.++||++|.|||. |+..+.|++||+ +.||+.++.+.+ ..+.+++..
T Consensus 16 ~~~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~sp---------A~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 86 (105)
T 1wha_A 16 SERGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGA---------AHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTAA 86 (105)
T ss_dssp CTTCCSCEEECCTTSCCSSTTCCSCEEEECCTTSS---------HHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHTSC
T ss_pred CCCccCEEEEeccCCCcccCCCCCEEEEEeCCCCH---------HHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 35689999999999887766789999999999764 444333799999 589999999864 555667767
Q ss_pred CCceEEEEEEee
Q psy9829 163 HNCISAQIKRTH 174 (333)
Q Consensus 163 g~~v~L~v~R~~ 174 (333)
+..+.|.|.|..
T Consensus 87 g~~v~l~v~R~~ 98 (105)
T 1wha_A 87 SPTIALLLEREA 98 (105)
T ss_dssp CSCEEEEEEECC
T ss_pred CCeEEEEEEECC
Confidence 888999998843
No 92
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.90 E-value=2.4e-09 Score=88.75 Aligned_cols=63 Identities=16% Similarity=0.298 Sum_probs=59.0
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~ 285 (333)
.++||.+|.++ ++|++.|+|++||+|++|||+++.+++++++.++|+...+.+.|+|.|+...
T Consensus 46 ~gv~V~~V~~~---spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~~ 108 (129)
T 2dmz_A 46 SGIYVKSVIPG---SAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLRNAGQVVHLTLVRRKTS 108 (129)
T ss_dssp CEEEEEEECTT---SHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHHHCCSSEEEEEEEESSS
T ss_pred CCEEEEEeCCC---CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCcc
Confidence 57999999999 9999999999999999999999999999999999999889999999998653
No 93
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=98.90 E-value=2e-09 Score=88.80 Aligned_cols=61 Identities=18% Similarity=0.296 Sum_probs=57.5
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREV 283 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~ 283 (333)
.++||.+|.++ ++|++.|+|++||+|++|||+++.+++++++..+|+.+.+.+.|+|.|..
T Consensus 45 ~~~~V~~v~~g---spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~ 105 (125)
T 3hpk_A 45 PCLYIVQVFDN---TPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQ 105 (125)
T ss_dssp SSEEEEEECTT---SHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEEEEC
T ss_pred CCEEEEEeCCC---CHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 46999999999 99999999999999999999999999999999999999999999998843
No 94
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.89 E-value=2.4e-09 Score=87.52 Aligned_cols=61 Identities=21% Similarity=0.256 Sum_probs=56.1
Q ss_pred eEEEEEEccCcccCccccC-CCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CceEEEEeccCC
Q psy9829 221 KIFVKEVTHRLDNNASAGT-HQLAEGDVLLKINNHPTDGMSVKEARKLIDSSK----EKLSLTIRREVP 284 (333)
Q Consensus 221 ~IfI~~I~~g~~ag~Aa~d-g~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~----~~v~L~V~R~~~ 284 (333)
++||.+|.++ ++|++. |.|++||+|++|||+++.++++.++..+|+.+. ..+.|+|.|+..
T Consensus 42 ~v~V~~V~~~---spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~~~~~~~~~v~l~v~R~~~ 107 (119)
T 2cs5_A 42 PVIVSRVAPG---TPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRPNAV 107 (119)
T ss_dssp EEEEEEECSS---STTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHHHHHCCSSCEEEEEECCCC
T ss_pred CeEEEEECCC---CHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHHHhccccCCCEEEEEEEcccc
Confidence 6999999999 898887 789999999999999999999999999999985 489999999753
No 95
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.89 E-value=6.7e-09 Score=81.35 Aligned_cols=75 Identities=13% Similarity=0.075 Sum_probs=60.8
Q ss_pred cceeeEEEecccC---CCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhh
Q psy9829 87 GSTFVGSVLGARG---ALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFR 160 (333)
Q Consensus 87 G~~~g~~i~gg~d---~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr 160 (333)
+.+|||.|.||.+ +|+. +.+.+++|++|.||| ||+. +|++||+ +.||+.++.+.+ .++.+++
T Consensus 12 ~~~lG~~i~gg~~~~~~p~~-~~~~gv~V~~V~~~s---------pA~~--gL~~GD~I~~vng~~v~~~~~~~~~~~~~ 79 (95)
T 1mfg_A 12 DPELGFSISGGVGGRGNPFR-PDDDGIFVTRVQPEG---------PASK--LLQPGDKIIQANGYSFINIEHGQAVSLLK 79 (95)
T ss_dssp SSSCSEEEEECBTSCCCSSS-TTCCCEEEEEECTTS---------TTTT--TCCTTCEEEEETTEECTTCBHHHHHHHHH
T ss_pred CCCCCEEEeCCcCccCCccc-cCCCCEEEEEECCCC---------chhh--CCCCCCEEEEECCEEcCCCCHHHHHHHhh
Confidence 4589999999885 6765 468899999999976 5555 5899999 589999999875 4455667
Q ss_pred hcCCceEEEEEEe
Q psy9829 161 IAHNCISAQIKRT 173 (333)
Q Consensus 161 ~~g~~v~L~v~R~ 173 (333)
..+..+.|.|.|.
T Consensus 80 ~~~~~v~l~v~R~ 92 (95)
T 1mfg_A 80 TFQNTVELIIVRE 92 (95)
T ss_dssp HCCSEEEEEEEEE
T ss_pred cCCCeEEEEEEeC
Confidence 7788899999885
No 96
>3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0
Probab=98.89 E-value=9.1e-10 Score=99.11 Aligned_cols=86 Identities=13% Similarity=0.224 Sum_probs=68.2
Q ss_pred CcCCCCCCCCeeehHHHHHHHHcCCEEEEecCccccccccccccccEEEEEecCchhhHHhhhcCCCcchhhHHHHHhhc
Q psy9829 3 EESDSKKCSGIIRLSAIRDMMDRGRHGLLDITPNAVDRLNYAQFYPIVIFLRAETKSNVKELRAGIPKYHTNLARQRSRV 82 (333)
Q Consensus 3 ~~~~~~~~~~~tsl~sVr~V~e~gkhCILDv~~~avk~L~~~~l~PivIfIkp~s~~~lk~lr~~~~Es~~ki~~raer~ 82 (333)
|......++++|+.++|++++++||+||||++.+++++++...++|++|||.|||.+ +.+|+.+.+..|.+++
T Consensus 87 e~~~~~~n~YGt~~~~v~~~l~~G~~vildid~qg~~~~~~~~~~~~~Ifi~Pps~~-------~~~e~~~~i~~r~~~~ 159 (197)
T 3ney_A 87 EFGSYQGNMFGTKFETVHQIHKQNKIAILDIEPQTLKIVRTAELSPFIVFIAPTDQG-------TQTEALQQLQKDSEAI 159 (197)
T ss_dssp EEEEETTEEEEEEHHHHHHHHHTTCEEEEECCGGGHHHHCSTTTCEEEEEEEECCBS-------SCCHHHHHHHHHHHHH
T ss_pred hhhhhhceecccchhhHHHHHhcCCeEEEEECHHHHHHHHhcCCCceEEEEeCCCcc-------ccchHHHHHHHHHHHH
Confidence 334455678899999999999999999999999999999999999999999999974 4556666777777666
Q ss_pred cccccceeeEEEe
Q psy9829 83 LFPVGSTFVGSVL 95 (333)
Q Consensus 83 ~qE~G~~~g~~i~ 95 (333)
..+....|...|.
T Consensus 160 ~~~~~~~fd~viv 172 (197)
T 3ney_A 160 RSQYAHYFDLSLV 172 (197)
T ss_dssp HHHHGGGCSEEEE
T ss_pred HHhhccCCCEEEE
Confidence 5454444555554
No 97
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=98.89 E-value=3.6e-09 Score=84.67 Aligned_cols=61 Identities=23% Similarity=0.308 Sum_probs=56.3
Q ss_pred eEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCC
Q psy9829 221 KIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 285 (333)
Q Consensus 221 ~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~ 285 (333)
.+||.+|.++ ++|++.| |++||+|++|||+.+.+++++++..+|+.+.+.+.|+|.|....
T Consensus 44 ~~~V~~v~~~---spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~~ 104 (107)
T 3qe1_A 44 LQHVSAVLPG---GAADRAG-VRKGDRILEVNGVNVEGATHKQVVDLIRAGEKELILTVLSVESE 104 (107)
T ss_dssp CEEEEEECTT---SHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHHCSSEEEEEEECSSCC
T ss_pred ceEEEEECCC---CHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEcCCCC
Confidence 4689999999 8888887 99999999999999999999999999999999999999997654
No 98
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.89 E-value=4.6e-09 Score=82.30 Aligned_cols=59 Identities=25% Similarity=0.365 Sum_probs=55.4
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREV 283 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~ 283 (333)
.++||.+|.++ ++|++ .|++||+|++|||+++.++++.++..+++...+.+.|+|.|+.
T Consensus 35 ~gv~V~~V~~~---spA~~--gL~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~ 93 (95)
T 1mfg_A 35 DGIFVTRVQPE---GPASK--LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVREV 93 (95)
T ss_dssp CCEEEEEECTT---STTTT--TCCTTCEEEEETTEECTTCBHHHHHHHHHHCCSEEEEEEEEEC
T ss_pred CCEEEEEECCC---Cchhh--CCCCCCEEEEECCEEcCCCCHHHHHHHhhcCCCeEEEEEEeCC
Confidence 47999999999 88888 7999999999999999999999999999999999999999975
No 99
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.88 E-value=2.5e-09 Score=87.40 Aligned_cols=66 Identities=17% Similarity=0.299 Sum_probs=57.9
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceE-EEEeccCCCCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLS-LTIRREVPRPTA 288 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~-L~V~R~~~~~~~ 288 (333)
.++||.+|.++ ++|++.|+|++||+|++|||+++.++++.++..+|+.+.+.+. |+|.|+....+.
T Consensus 42 ~gv~V~~V~~~---spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R~~~~~~~ 108 (119)
T 1x6d_A 42 KVITVHRVFPN---GLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREPRQAVIVTRKLTPEAM 108 (119)
T ss_dssp SSCEEEEECSS---SHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTTSSSEEEEEEECCCSSSC
T ss_pred CCEEEEEECCC---ChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEcCCCccch
Confidence 46999999999 9999999999999999999999999999999999999877655 778887655443
No 100
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=98.88 E-value=2.3e-09 Score=88.52 Aligned_cols=76 Identities=14% Similarity=0.193 Sum_probs=63.0
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
+.+|||+|.||.+.+. .+.++||++|.|||.| +..++|++||+ +.||++++.+++ .++.+++.++
T Consensus 35 ~~~lGf~i~gg~~~~~---~~~gv~V~~V~~gspA---------~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~ 102 (118)
T 3b76_A 35 GESLGMTVAGGASHRE---WDLPIYVISVEPGGVI---------SRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRTS 102 (118)
T ss_dssp TCCCCEEEEECSCSTT---CCCCEEEEEECTTSHH---------HHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSCC
T ss_pred CCccCEEEecCCCCCC---CCCCEEEEEECCCCHH---------HHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 5799999999998765 5789999999997754 44444799999 689999999875 6677888888
Q ss_pred CceEEEEEEee
Q psy9829 164 NCISAQIKRTH 174 (333)
Q Consensus 164 ~~v~L~v~R~~ 174 (333)
..++|.|.|..
T Consensus 103 ~~v~L~v~R~~ 113 (118)
T 3b76_A 103 SSIVLKALEVK 113 (118)
T ss_dssp SEEEEEEEEEE
T ss_pred CeEEEEEEECC
Confidence 89999998865
No 101
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=98.88 E-value=2.4e-09 Score=84.96 Aligned_cols=60 Identities=15% Similarity=0.243 Sum_probs=57.0
Q ss_pred eEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccC
Q psy9829 221 KIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREV 283 (333)
Q Consensus 221 ~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~ 283 (333)
++||.+|.++ ++|++.|+|++||+|++|||+++.++++.++..+++.+.+.+.|+|.|+.
T Consensus 36 gv~V~~V~~~---spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~~ 95 (104)
T 3i4w_A 36 GIFISFILAG---GPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKP 95 (104)
T ss_dssp CEEEEEECTT---SHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEEECH
T ss_pred CEEEEEECCC---ChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECc
Confidence 7999999999 99999889999999999999999999999999999999999999998863
No 102
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.87 E-value=4.8e-09 Score=84.44 Aligned_cols=63 Identities=29% Similarity=0.408 Sum_probs=57.6
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhc--CCceEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS--KEKLSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s--~~~v~L~V~R~~~~ 285 (333)
.+++|.+|.++ ++|++.|+|++||+|++|||+++.+++++++.++|+.+ .+.+.|+|.|+...
T Consensus 39 ~g~~V~~V~~~---spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~ 103 (111)
T 2koj_A 39 APIYVKNILPR---GAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTKMEGTVSLLVFRQEEA 103 (111)
T ss_dssp SCEEEEEECSS---SHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCCCSSEEEEEEEECCCC
T ss_pred cCEEEEEECCC---ChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCCC
Confidence 47999999999 89988888999999999999999999999999999986 67899999997643
No 103
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=98.87 E-value=4e-09 Score=83.04 Aligned_cols=59 Identities=22% Similarity=0.297 Sum_probs=54.7
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEecc
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRRE 282 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~ 282 (333)
.+++|.+|.++ ++|++.| |++||+|++|||+++.+++++|+.++|+.+.+.+.|+|.|.
T Consensus 37 ~~~~V~~V~~~---spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~~~ 95 (96)
T 2ego_A 37 MVTFVARVHES---SPAQLAG-LTPGDTIASVNGLNVEGIRHREIVDIIKASGNVLRLETLYG 95 (96)
T ss_dssp EEEEEEEECTT---CHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEEEEECC
T ss_pred CCeEEEEECCC---ChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEEC
Confidence 47999999999 8888887 99999999999999999999999999999988999998764
No 104
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.87 E-value=3.4e-09 Score=84.75 Aligned_cols=63 Identities=19% Similarity=0.312 Sum_probs=57.0
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPRPT 287 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~~~ 287 (333)
.++||.+|.++ ++|++.| |++||+|++|||+.+.+++++++.++|+. .+.+.|+|.|...+++
T Consensus 41 ~g~~V~~V~~~---spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~~v~l~v~r~~~~~s 103 (104)
T 1wi2_A 41 LGIFISKVIPD---SDAHRAG-LQEGDQVLAVNDVDFQDIEHSKAVEILKT-AREISMRVRFFSGPSS 103 (104)
T ss_dssp CCCEEEEECTT---SHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHHH-SSSEEEEEECCCCSCC
T ss_pred CCEEEEEeCCC---ChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC-CCEEEEEEEECCCCCC
Confidence 46999999999 8888776 99999999999999999999999999999 7899999999876553
No 105
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.87 E-value=4.2e-09 Score=81.75 Aligned_cols=59 Identities=27% Similarity=0.308 Sum_probs=54.9
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEecc
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRRE 282 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~ 282 (333)
.+++|.+|.++ ++|++.| |++||+|++|||+.+.++++.++..+++...+.+.|+|.|+
T Consensus 32 ~gv~V~~V~~~---spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 90 (91)
T 1m5z_A 32 KGVYVKNIRPA---GPGDLGG-LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN 90 (91)
T ss_dssp SCEEEEEECTT---SHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEEEEEEC
T ss_pred CCEEEEEECCC---CHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEeC
Confidence 47999999999 8888777 99999999999999999999999999999889999999886
No 106
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.87 E-value=2.7e-09 Score=81.63 Aligned_cols=60 Identities=22% Similarity=0.236 Sum_probs=55.0
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREV 283 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~ 283 (333)
.+++|.++.++ ++|++.| |++||+|++|||+++.+++++++.++|+.+.+.+.|+|.|+.
T Consensus 23 ~~~~V~~V~~~---spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~ 82 (83)
T 2kv8_A 23 APCVLSCVMRG---SPADFVG-LRAGDQILAVNEINVKKASHEDVVKLIGKCSGVLHMVIAEGV 82 (83)
T ss_dssp SSCBCCBCCTT---STTTTTT-CCTTCEEEEETTEECSSCCHHHHHHHHTTCSSCEEEEEECCC
T ss_pred CCeEEEEeCCC---ChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEcCC
Confidence 46899999999 8888777 999999999999999999999999999988889999999864
No 107
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=98.87 E-value=4.4e-09 Score=82.56 Aligned_cols=62 Identities=19% Similarity=0.250 Sum_probs=56.9
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~ 285 (333)
.+++|.+|.++ ++|++.| |++||+|++|||+.+.+++++++..+|+...+.+.|+|.|+...
T Consensus 30 ~g~~V~~V~~~---spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~~ 91 (96)
T 2v90_A 30 PGQFLWEVDPG---LPAKKAG-MQAGDRLVAVAGESVEGLGHEETVSRIQGQGSCVSLTVVDPEAD 91 (96)
T ss_dssp EEEEEEEECTT---SHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEECCCTT
T ss_pred CCeEEEEECCC---ChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEECCCCc
Confidence 37999999999 8888877 99999999999999999999999999999888999999997643
No 108
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=98.86 E-value=2.7e-09 Score=85.52 Aligned_cols=60 Identities=23% Similarity=0.296 Sum_probs=55.9
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEecc
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRRE 282 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~ 282 (333)
.+++|.+|.++ ++|++.|+|++||+|++|||+++.+++++|+.++|+.+.+.+.|+|.+.
T Consensus 36 ~gv~V~~V~~g---spA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~v~L~V~~~ 95 (97)
T 2ejy_A 36 QSCTVARILHG---GMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKETKGMISLKVIPN 95 (97)
T ss_dssp CCEEEEEECSS---SHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHCCEEEEEEEECC
T ss_pred CCEEEEEeCCC---CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 47999999999 9999999999999999999999999999999999999888999998653
No 109
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=98.86 E-value=4.5e-09 Score=85.35 Aligned_cols=61 Identities=21% Similarity=0.376 Sum_probs=57.1
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREV 283 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~ 283 (333)
.+++|.+|.++ ++|++.|+|++||+|++|||+++.++++.++..+++.+.+.+.|+|.|+.
T Consensus 49 ~gv~V~~V~~~---spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~ 109 (112)
T 2r4h_A 49 MDLYVLRLAED---GPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKNGGRRVRLFLKRGE 109 (112)
T ss_dssp CCEEEEEECTT---SHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEECCE
T ss_pred CCEEEEEECCC---ChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 47999999999 99999888999999999999999999999999999998899999998864
No 110
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=98.86 E-value=6.4e-09 Score=87.31 Aligned_cols=62 Identities=13% Similarity=0.214 Sum_probs=57.0
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~ 285 (333)
.++||.+|.++ ++|++.| |++||+|++|||+++.++++++++.+|+.+.+.+.|+|.|....
T Consensus 65 ~gv~V~~V~~g---spA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v~l~v~~~~~~ 126 (132)
T 3l4f_D 65 ALQYLESVDEG---GVAWRAG-LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRH 126 (132)
T ss_dssp CSEEEEEECTT---SGGGGGT-CCTTCEEEEESSSBCTTSCHHHHHHHHHHTTTEEEEEEECCCC-
T ss_pred CCEEEEEECCC---CHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECCCC
Confidence 36999999999 9998888 99999999999999999999999999999999999999887543
No 111
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.85 E-value=5e-09 Score=87.44 Aligned_cols=76 Identities=17% Similarity=0.302 Sum_probs=61.6
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
..||||.|.||.+.|+ ++.+|||++|.|||. |+..++|++||+ +.||++++.+++ .++++|+.++
T Consensus 39 ~~glG~~i~gg~~~~~---~~~~i~I~~V~~gs~---------A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 106 (130)
T 1i16_A 39 SAGLGFSLEGGKGSLH---GDKPLTINRIFKGAA---------SEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALP 106 (130)
T ss_dssp SSSTTEEEECCCCCSS---SCCCCEEEEECSSCC---------CSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTSC
T ss_pred CCccCEEEecCcCCCC---CCCCEEEEEECCCCH---------HHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 5699999999999988 467899999999764 555446799999 589999999974 5667777765
Q ss_pred C-ceEEEEEEee
Q psy9829 164 N-CISAQIKRTH 174 (333)
Q Consensus 164 ~-~v~L~v~R~~ 174 (333)
. .+.|+|+|..
T Consensus 107 ~~~v~l~v~r~~ 118 (130)
T 1i16_A 107 DGPVTIVIRRKS 118 (130)
T ss_dssp SSEEEEEEEEES
T ss_pred CceEEEEEEeCC
Confidence 4 5999998864
No 112
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.85 E-value=4.3e-09 Score=83.75 Aligned_cols=60 Identities=25% Similarity=0.361 Sum_probs=55.9
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
.++||.+|.++ ++|++ .|++||+|++|||+++.++++.++..+++.+.+.+.|+|.|+..
T Consensus 43 ~gv~V~~V~~~---spA~~--gL~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~ 102 (103)
T 1n7t_A 43 DGIFVTRVQPE---GPASK--LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVREVS 102 (103)
T ss_dssp CSEECCCBSSS---STTSS--SCCTTCEEEEETTEECSSCCHHHHHHHHHHCCSEEEEEEECCCC
T ss_pred CCEEEEEECCC---CchHH--CCCCCCEEEEECCEECCCCCHHHHHHHhhcCCCeEEEEEEecCC
Confidence 47999999999 88888 79999999999999999999999999999999999999999753
No 113
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.85 E-value=8.5e-09 Score=85.28 Aligned_cols=60 Identities=17% Similarity=0.224 Sum_probs=52.3
Q ss_pred eEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhc--CCceEEEEeccCCCC
Q psy9829 221 KIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS--KEKLSLTIRREVPRP 286 (333)
Q Consensus 221 ~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s--~~~v~L~V~R~~~~~ 286 (333)
+.||++|.+. +.++.|++||+|++|||+++++++|.|++++|+.+ .+.|.|+|.|+....
T Consensus 35 g~~V~~I~~~------~~~aGL~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~~v~L~V~R~g~~~ 96 (113)
T 3soe_A 35 GQKVKMILDS------QWCQGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPVGADVPLLILRGGPPS 96 (113)
T ss_dssp EEEEEEESCG------GGSTTCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTCEEEEEEEESSCC-
T ss_pred CcEEEEecCh------HHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEECCccC
Confidence 5779999884 45679999999999999999999999999999997 458999999987543
No 114
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.85 E-value=2.5e-09 Score=84.79 Aligned_cols=62 Identities=21% Similarity=0.385 Sum_probs=57.7
Q ss_pred eEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCC
Q psy9829 221 KIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 285 (333)
Q Consensus 221 ~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~ 285 (333)
+++|.+|.++ ++|++.|+|++||+|++|||+++.++++.++..+++...+.+.|+|.|+...
T Consensus 37 ~~~V~~V~~~---spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~ 98 (103)
T 1wfv_A 37 DLYVLRLAED---GPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRRVRLLLKRGTGS 98 (103)
T ss_dssp EEECCCBCTT---SHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHHCSEECEEEECTTCS
T ss_pred CEEEEEECCC---ChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCCC
Confidence 7999999999 8998888899999999999999999999999999998889999999997643
No 115
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=98.84 E-value=5.1e-09 Score=81.22 Aligned_cols=61 Identities=16% Similarity=0.287 Sum_probs=56.1
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
.+++|.+|.++ ++|++.| |++||+|++|||+++.+++|+++.++|+.+.+.+.|+|.|...
T Consensus 28 ~gv~V~~V~~~---spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 88 (90)
T 2he4_A 28 PGQYIRSVDPG---SPAARSG-LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPST 88 (90)
T ss_dssp SSEEEEEECTT---SHHHHHT-CCTTCEEEEETTEECTTSCHHHHHHHHTTSSSEEEEEEECCCC
T ss_pred CCEEEEEECCC---ChHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEccCC
Confidence 36999999999 8888877 9999999999999999999999999999998999999998753
No 116
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=98.83 E-value=8.3e-09 Score=79.53 Aligned_cols=60 Identities=30% Similarity=0.472 Sum_probs=55.2
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREV 283 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~ 283 (333)
.+++|.+|.++ ++|++. .|++||+|++|||+++.+++++++.++|+.+.+.+.|+|.|+.
T Consensus 26 ~g~~V~~V~~~---spA~~a-GL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~ 85 (87)
T 2pa1_A 26 TPIMVTKVAER---GKAKDA-DLRPGDIIVAINGESAEGMLHAEAQSKIRQSPSPLRLQLDRIT 85 (87)
T ss_dssp EEEEEEEECSS---SHHHHT-TCCTTCEEEEETTEESTTCCHHHHHHHHHTCCSSEEEEEEECC
T ss_pred CCEEEEEECCC---ChHHHc-CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEecC
Confidence 37999999999 887765 4999999999999999999999999999999899999999975
No 117
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=98.83 E-value=6.4e-09 Score=82.51 Aligned_cols=62 Identities=16% Similarity=0.295 Sum_probs=56.5
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
.++||.+|.++ ++|++.|+|++||+|++|||+++.+++++++.++|+.+.+.+.|+|.|...
T Consensus 39 ~g~~V~~V~~~---spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 100 (103)
T 2fcf_A 39 RGIFIKHVLED---SPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIIS 100 (103)
T ss_dssp --EEEEEECSS---SHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSSEEEEEECCCC
T ss_pred CCEEEEEeCCC---CcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEECCC
Confidence 47999999999 999988889999999999999999999999999999998899999988653
No 118
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=98.83 E-value=5.4e-09 Score=81.48 Aligned_cols=62 Identities=23% Similarity=0.333 Sum_probs=55.5
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~ 285 (333)
.+++|.+|.++ ++|++.| |++||+|++|||+.+.++++.++.++|+...+.+.|+|.|..+.
T Consensus 24 ~~~~V~~V~~~---spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~~ 85 (91)
T 2f5y_A 24 SPVRVQAVDSG---GPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILLVWRMVPQ 85 (91)
T ss_dssp SSCEEEEECTT---SHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEEECC--
T ss_pred CCEEEEEECCC---CHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCCC
Confidence 46899999999 8888777 99999999999999999999999999999888999999997643
No 119
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=98.83 E-value=3.8e-09 Score=84.50 Aligned_cols=78 Identities=13% Similarity=0.115 Sum_probs=62.4
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
..||||+|.||.|.+..+ .+.+++|++|.|||.| +..++|++||+ +.||+.++.+.+ .+..+++..+
T Consensus 13 ~~glG~~i~gg~~~~~~~-~~~gv~V~~V~~~spA---------~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 82 (105)
T 2awx_A 13 PKGLGFSIAGGVGNQHIP-GDNSIYVTKIIEGGAA---------HKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKNTS 82 (105)
T ss_dssp TTBSSEEEEECBTSCSBT-TBCCEEEEEECTTSHH---------HHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHSCC
T ss_pred CCCCCEEEeCccCCCCCC-CCCCEEEEEECCCCHH---------HHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 459999999999998864 6889999999997754 44334799999 589999998875 4455666678
Q ss_pred CceEEEEEEee
Q psy9829 164 NCISAQIKRTH 174 (333)
Q Consensus 164 ~~v~L~v~R~~ 174 (333)
..+.|.|.|..
T Consensus 83 ~~v~l~v~R~~ 93 (105)
T 2awx_A 83 DFVYLKVAKPT 93 (105)
T ss_dssp SEEEEEEECCC
T ss_pred CeEEEEEEcCC
Confidence 88999998843
No 120
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.83 E-value=5.1e-09 Score=104.71 Aligned_cols=157 Identities=12% Similarity=0.104 Sum_probs=97.2
Q ss_pred CceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcchhhhhhhh--cCCceEEEEEEeeccCCCC-CCC
Q psy9829 108 PSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVVGSWQVFRI--AHNCISAQIKRTHFNYDQP-EKG 183 (333)
Q Consensus 108 ~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~~a~~alr~--~g~~v~L~v~R~~~~~~~p-~~~ 183 (333)
.|++|++|.|||.| +. .+|++||+ +.+|+..+.+......++.. .+..++|.|.|......-. ...
T Consensus 282 ~G~~V~~V~~~spA---------~~-aGL~~GDvI~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~~~~v~l~ 351 (451)
T 3pv2_A 282 QGALVSQVNPNSPA---------EL-AGLKAGDIITQINDTKITQATQVKTTISLLRVGSTVKIIVERDNKPLTLSAVVT 351 (451)
T ss_dssp CCEEEEEECTTSHH---------HH-HTCCTTCEEEEETTEECCSHHHHHHHHHTSCTTCEEEEEEEETTEEEEEEEECB
T ss_pred ceEEEEecCCCChH---------HH-cCCCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEEc
Confidence 79999999997754 43 34799999 58999999887654455543 5678999998832110000 000
Q ss_pred CCCCCCCceeEEeeecCCCccccccc-e-eecccccccCeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCH
Q psy9829 184 EMSFRKGDVFHVIDTLHNGVVGSWQV-F-RIDFGIILGNKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSV 261 (333)
Q Consensus 184 ~l~~~~g~~~hv~~sl~~~~lG~~~~-~-~~d~G~~l~~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~ 261 (333)
.+. .... ..........|.... . ..........+++|.++.++ ++|++.| |++||+|++|||+.+. +.
T Consensus 352 ~~~---~~~~-~~~~~~~~~~G~~l~~~~~~~~~~~~~~Gv~V~~V~~g---spA~~aG-L~~GD~I~~Vng~~v~--~~ 421 (451)
T 3pv2_A 352 DIK---SHEQ-KLQSNNPFLYGLALRAFEQESPPHGNVIGVQVVGASEN---SAGWRAG-IRPGDIIISANKKPVT--DV 421 (451)
T ss_dssp CHH---HHHH-HHHHHSTTTTTEEEEEEEEECTTSCEEEEEEEEEECTT---SHHHHHT-CCTTCEEEEETTEECC--SH
T ss_pred cCC---cccc-ccccccccccccccccCChhHhcccCCCceEEEEECCC---CHHHHcC-CCCCCEEEEECCEECC--CH
Confidence 000 0000 000000000000000 0 00000011247999999999 8887776 9999999999999876 46
Q ss_pred HHHHHHHHhcCCceEEEEeccCC
Q psy9829 262 KEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 262 ~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
+|..++|+.....+.|.|.|+..
T Consensus 422 ~~~~~~l~~~~~~v~l~v~R~g~ 444 (451)
T 3pv2_A 422 KSLQTIAQEKKKELLVQVLRGPG 444 (451)
T ss_dssp HHHHHHTTSSCSCEEEEEEETTE
T ss_pred HHHHHHHhcCCCeEEEEEEECCE
Confidence 89999999988899999999753
No 121
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.82 E-value=8.1e-09 Score=82.84 Aligned_cols=80 Identities=13% Similarity=0.072 Sum_probs=62.4
Q ss_pred cceeeEEEecccCCC--CCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhh
Q psy9829 87 GSTFVGSVLGARGAL--DLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRI 161 (333)
Q Consensus 87 G~~~g~~i~gg~d~p--~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~ 161 (333)
..+|||.|.||.+.. .+...+.++||++|.+||.| +...+|++||+ +.||++++.+.+ .++.+++.
T Consensus 18 ~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA---------~~aggL~~GD~Il~vng~~v~~~~~~~~~~~~~~ 88 (107)
T 1uhp_A 18 SGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPA---------AKEGGLQIHDRIIEVNGRDLSRATHDQAVEAFKT 88 (107)
T ss_dssp SSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHH---------HHTTCCCSSCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred CCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChH---------HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 679999999999763 22235789999999997754 44335799999 689999998875 45567777
Q ss_pred cCCceEEEEEEeec
Q psy9829 162 AHNCISAQIKRTHF 175 (333)
Q Consensus 162 ~g~~v~L~v~R~~~ 175 (333)
.+..+.|.|.|+.+
T Consensus 89 ~~~~v~l~v~R~~~ 102 (107)
T 1uhp_A 89 AKEPIVVQVLRRTS 102 (107)
T ss_dssp CCSSEEEEEEECCS
T ss_pred CCCcEEEEEEeCCC
Confidence 88899999988553
No 122
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.82 E-value=5.9e-09 Score=81.72 Aligned_cols=60 Identities=18% Similarity=0.359 Sum_probs=56.1
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREV 283 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~ 283 (333)
.+++|.+|.++ ++|++.|.|++||+|++|||+++ +++++|+.++|+...+.+.|+|.|..
T Consensus 29 ~~v~V~~V~~~---spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~~~~v~l~v~~~~ 88 (91)
T 2e7k_A 29 GELVIARILHG---GMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNASGSVILKILSGP 88 (91)
T ss_dssp SSEEEEEECSS---SHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTCCSSBCEEEECCS
T ss_pred CCEEEEEECCC---CHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 57999999999 99999889999999999999999 99999999999999999999998764
No 123
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=98.82 E-value=1.3e-08 Score=95.45 Aligned_cols=62 Identities=18% Similarity=0.265 Sum_probs=58.5
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
.++||.+|.++ ++|++++.|++||+|++|||+++.+++|+|++.+|+.+.+.|.|+|.|...
T Consensus 103 ~gi~V~~V~~g---spA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~~~g~~V~L~V~R~~~ 164 (263)
T 1z87_A 103 MPILISKIFKG---LAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKYMKE 164 (263)
T ss_dssp EEEEEEECCTT---SHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHHHCCSCCCEEEECCSS
T ss_pred CCEEEEEECCC---CHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHhcCCCeEEEEEEeCcc
Confidence 47999999999 999998899999999999999999999999999999999999999999643
No 124
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.81 E-value=8.5e-09 Score=83.83 Aligned_cols=63 Identities=21% Similarity=0.333 Sum_probs=58.1
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~ 285 (333)
.++||.+|.++ ++|++.|-|++||+|++|||+.+.+++++++.++|+...+.+.|+|.|....
T Consensus 48 ~gv~V~~V~~~---spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~~ 110 (113)
T 1va8_A 48 DSVIISRIVKG---GAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTLTFVLIPSSGP 110 (113)
T ss_dssp SSEEEEEECTT---SHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCEEEEEEEECCCCC
T ss_pred CCEEEEEeCCC---CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCcc
Confidence 57999999999 9998888679999999999999999999999999999999999999987654
No 125
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=98.81 E-value=1e-08 Score=79.62 Aligned_cols=62 Identities=27% Similarity=0.376 Sum_probs=56.9
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~ 285 (333)
.+++|.+|.++ ++|++.| |++||+|++|||+++.++++.++..+|+...+.+.|+|.|+...
T Consensus 27 ~g~~V~~V~~~---spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~g~~ 88 (91)
T 2pkt_A 27 QPLAISRVTPG---SKAALAN-LCIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLTLTVARSEHE 88 (91)
T ss_dssp EEEEEEEECTT---SHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEEEECCC
T ss_pred CCeEEEEECCC---CHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCcc
Confidence 47999999999 8888776 99999999999999999999999999999889999999998654
No 126
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.81 E-value=6.6e-09 Score=79.49 Aligned_cols=60 Identities=30% Similarity=0.429 Sum_probs=54.3
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREV 283 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~ 283 (333)
.+++|.+|.++ ++|++- .|++||+|++|||+++.++++.++..+++...+.+.|+|.|+.
T Consensus 25 ~~v~V~~V~~~---spA~~a-Gl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~ 84 (85)
T 1rgw_A 25 MPLTISRITPG---SKAAQS-QLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQKSK 84 (85)
T ss_dssp SCCBEEEECTT---SHHHHS-SCCCCSBEEEETTEECTTCCHHHHHHHHTTCSSCEEEEEESCC
T ss_pred CCeEEEEECCC---CHHHHc-CCCCCCEEEEECCEECCCcCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 36899999999 877764 5999999999999999999999999999988889999998864
No 127
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.81 E-value=1.1e-08 Score=83.24 Aligned_cols=80 Identities=11% Similarity=0.066 Sum_probs=63.0
Q ss_pred cceeeEEEecccCCCCC---CCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhh
Q psy9829 87 GSTFVGSVLGARGALDL---ANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFR 160 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~---~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr 160 (333)
+.+|||.|.||.+.++. ...+.++||++|.+|| ||+..++|++||+ +.||+.++.+.+ .++.+++
T Consensus 26 ~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~s---------pA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~ 96 (117)
T 2ehr_A 26 NVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDS---------PAGKTNALKTGDKILEVSGVDLQNASHSEAVEAIK 96 (117)
T ss_dssp SSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSS---------TTTSSCSCCTTCEEEEESSCBCTTCCHHHHHHHHH
T ss_pred CCccCEEEeCCcccccccccCCCcCCEEEEEeCCCC---------hHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57999999999998632 2246899999999976 4555444799999 589999998875 4556777
Q ss_pred hcCCceEEEEEEeec
Q psy9829 161 IAHNCISAQIKRTHF 175 (333)
Q Consensus 161 ~~g~~v~L~v~R~~~ 175 (333)
..+..++|.|.|...
T Consensus 97 ~~g~~v~l~v~r~~~ 111 (117)
T 2ehr_A 97 NAGNPVVFIVQSLSS 111 (117)
T ss_dssp TSCSSEEEEECCBSC
T ss_pred cCCCeEEEEEEECCC
Confidence 788899999988553
No 128
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.80 E-value=1.2e-08 Score=83.65 Aligned_cols=81 Identities=12% Similarity=0.094 Sum_probs=65.4
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
..+|||.|.||.+.|+.. .+.+++|++|.+||.| +..++|++||+ +.||+.++.+++ ..+.+++..+
T Consensus 27 ~~~lG~~i~~~~~~~~~~-~~~gv~V~~V~~~spA---------~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~g 96 (120)
T 2eno_A 27 PSGLGFNIVGGTDQQYVS-NDSGIYVSRIKENGAA---------ALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAG 96 (120)
T ss_dssp SSSCSEEEECCTTTCSSS-SCCSEEEEEECSSSHH---------HHSCCSCTTCEEEEETTEECCSCCHHHHHHHHHHHC
T ss_pred CCCCCEEEecccCCcccc-CCCCEEEEEECCCChH---------HHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 469999999999998764 6889999999997754 43333799999 589999999986 5566777778
Q ss_pred CceEEEEEEeeccC
Q psy9829 164 NCISAQIKRTHFNY 177 (333)
Q Consensus 164 ~~v~L~v~R~~~~~ 177 (333)
..++|.|.|.....
T Consensus 97 ~~v~l~v~R~~~~~ 110 (120)
T 2eno_A 97 YAVSLRVQHRLQVQ 110 (120)
T ss_dssp SEEEEEEEEEEECC
T ss_pred CeEEEEEEeCCcCC
Confidence 88999999866543
No 129
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.80 E-value=1.2e-08 Score=84.00 Aligned_cols=63 Identities=24% Similarity=0.375 Sum_probs=57.8
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhc--CCceEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS--KEKLSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s--~~~v~L~V~R~~~~ 285 (333)
.+++|.+|.++ ++|++.|.|++||+|++|||+.+.+++++|+.++|+.. .+.+.|+|.|+...
T Consensus 45 ~~~~V~~V~~~---spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~ 109 (122)
T 1v5q_A 45 SPPLISYIEAD---SPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEFDVAE 109 (122)
T ss_dssp SCCEEEEECTT---SHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHHHTTTTCEEEEEEEECCC
T ss_pred CCcEEEEECCC---ChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEECCcc
Confidence 35899999999 99998888999999999999999999999999999998 57999999998754
No 130
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.80 E-value=8.1e-09 Score=81.61 Aligned_cols=59 Identities=27% Similarity=0.429 Sum_probs=55.1
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREV 283 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~ 283 (333)
.++||.+|.++ ++| ++.|++||+|++|||+.+.++++.++..+++...+.+.|+|.|+.
T Consensus 31 ~~~~V~~V~~~---spA--~agL~~GD~Il~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~ 89 (96)
T 2edv_A 31 LPLTVVAVTAG---GSA--HGKLFPGDQILQMNNEPAEDLSWERAVDILREAEDSLSITVVRCT 89 (96)
T ss_dssp SSCBCCCBCSS---SSS--TTTSCTTCBEEEESSCBSTTCCHHHHHHHHHHCSSCEEEEEEECC
T ss_pred CCeEEEEECCC---Cch--hhCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 47999999999 777 389999999999999999999999999999999999999999987
No 131
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=98.79 E-value=6.5e-09 Score=81.01 Aligned_cols=76 Identities=14% Similarity=0.117 Sum_probs=61.0
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
..||||++.||.+.++.+ .+.+++|++|.|||.| +..+.|++||+ +.||+..+.+.+ ....+++..+
T Consensus 13 ~~g~G~~i~gg~~~~~~~-~~~gv~V~~V~~~spA---------~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 82 (94)
T 2fe5_A 13 PKGLGFSIAGGIGNQHIP-GDNSIYITKIIEGGAA---------QKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTS 82 (94)
T ss_dssp TTCSCEEEEECBTSCSBT-TBCCEEEEEECTTSHH---------HHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHTCC
T ss_pred CCCCCEEEEcccCCCCCC-CCCCEEEEEECCCChH---------HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 568999999999998875 6889999999998754 43333799999 589999999874 4455666677
Q ss_pred CceEEEEEE
Q psy9829 164 NCISAQIKR 172 (333)
Q Consensus 164 ~~v~L~v~R 172 (333)
..++|.|.|
T Consensus 83 ~~v~l~v~R 91 (94)
T 2fe5_A 83 DMVYLKVAK 91 (94)
T ss_dssp SEEEEEEEC
T ss_pred CeEEEEEEc
Confidence 789999977
No 132
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.79 E-value=3.2e-09 Score=86.90 Aligned_cols=77 Identities=5% Similarity=-0.041 Sum_probs=63.1
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
+.+|||+|.||.+.|.. +++.++||++|.|||.| +..++|++||+ +.||++++.+++ .++.+++.++
T Consensus 29 ~~glG~~i~g~~~~~~~-~~~~g~~V~~v~~~s~A---------~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~ 98 (117)
T 1ujd_A 29 GNGLGIRIVGGKEIPGH-SGEIGAYIAKILPGGSA---------EQTGKLMEGMQVLEWNGIPLTSKTYEEVQSIISQQS 98 (117)
T ss_dssp CCSCSEEEEEEEECSSS-SSCEEEEEEEECTTCHH---------HHHSSCCTTCEEEEETTEECTTCCHHHHHHHHSCCS
T ss_pred CCcccEEEeCCCCCCcc-cCCcCEEEEEECCCCHH---------HHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Confidence 57999999999999875 46889999999997754 44334799999 589999999874 5566777788
Q ss_pred CceEEEEEEe
Q psy9829 164 NCISAQIKRT 173 (333)
Q Consensus 164 ~~v~L~v~R~ 173 (333)
..++|.|+|.
T Consensus 99 ~~v~l~v~R~ 108 (117)
T 1ujd_A 99 GEAEICVRLD 108 (117)
T ss_dssp SCEEEEEESS
T ss_pred CEEEEEEEEC
Confidence 8899999884
No 133
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.79 E-value=1.2e-08 Score=81.21 Aligned_cols=75 Identities=13% Similarity=0.075 Sum_probs=60.8
Q ss_pred cceeeEEEecccC---CCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhh
Q psy9829 87 GSTFVGSVLGARG---ALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFR 160 (333)
Q Consensus 87 G~~~g~~i~gg~d---~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr 160 (333)
+.+|||.+.||.+ +|+. ..+.+++|++|.||| ||+. +|++||+ +.||+..+.+.+ .++.+++
T Consensus 20 ~~~lG~~i~gg~~~~~~p~~-~~~~gv~V~~V~~~s---------pA~~--gL~~GD~I~~vng~~v~~~~~~~~~~~~~ 87 (103)
T 1n7t_A 20 DPELGFSISGGVGGRGNPFR-PDDDGIFVTRVQPEG---------PASK--LLQPGDKIIQANGYSFINIEHGQAVSLLK 87 (103)
T ss_dssp SSCCCBEEEECTTSSBCSSC-SSCCSEECCCBSSSS---------TTSS--SCCTTCEEEEETTEECSSCCHHHHHHHHH
T ss_pred CCCccEEEEcccCCCCCccc-cCCCCEEEEEECCCC---------chHH--CCCCCCEEEEECCEECCCCCHHHHHHHhh
Confidence 4589999999885 6665 368899999999976 5565 5899999 589999999875 4556677
Q ss_pred hcCCceEEEEEEe
Q psy9829 161 IAHNCISAQIKRT 173 (333)
Q Consensus 161 ~~g~~v~L~v~R~ 173 (333)
..+..++|.|.|.
T Consensus 88 ~~g~~v~l~v~R~ 100 (103)
T 1n7t_A 88 TFQNTVELIIVRE 100 (103)
T ss_dssp HCCSEEEEEEECC
T ss_pred cCCCeEEEEEEec
Confidence 7788899999884
No 134
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=98.78 E-value=1.4e-08 Score=78.75 Aligned_cols=59 Identities=14% Similarity=0.210 Sum_probs=53.3
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEecc
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRRE 282 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~ 282 (333)
.++||.+|.++ ++|++.| |++||+|++|||+++.++++.++..+|+.+.+.+.+.+.|.
T Consensus 27 ~g~~V~~V~~~---spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~~~~r 85 (91)
T 1g9o_A 27 LGQYIRLVEPG---SPAEKAG-LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDP 85 (91)
T ss_dssp SSEEEEEECTT---SHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEECC
T ss_pred CCEEEEEECCC---CHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEcC
Confidence 47999999999 8888887 99999999999999999999999999999888877776554
No 135
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.78 E-value=1.9e-08 Score=78.71 Aligned_cols=62 Identities=27% Similarity=0.341 Sum_probs=55.4
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPRP 286 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~~ 286 (333)
.+++|.+|.++ ++|++.| |++||+|++|||+.+.++++.++...++ ..+.+.|+|.|+...+
T Consensus 29 ~g~~V~~V~~~---spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~-~g~~v~l~v~R~~~~~ 90 (93)
T 2dls_A 29 RIVLVQSVRPG---GAAMKAG-VKEGDRIIKVNGTMVTNSSHLEVVKLIK-SGAYVALTLLGSSSGP 90 (93)
T ss_dssp SSCEEEEECSS---STTTTTT-CCSSCEEEEETTEECSSSCHHHHHHHHT-SSSEEEEEEECCCCCS
T ss_pred CCEEEEEECCC---CHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhc-CCCEEEEEEEECCCCC
Confidence 47999999999 8888777 9999999999999999999999999988 5889999999986543
No 136
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.78 E-value=1.1e-08 Score=84.98 Aligned_cols=62 Identities=16% Similarity=0.295 Sum_probs=57.9
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
.+++|.+|.++ ++|++.|+|++||+|++|||+++.+++++|+.++|+.+.+.+.|+|.|...
T Consensus 59 ~gv~V~~V~~~---spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 120 (123)
T 2iwq_A 59 RGIFIKHVLED---SPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIIS 120 (123)
T ss_dssp CSEEEEEECSS---SHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEECCCC
T ss_pred CCEEEEEECCC---ChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCc
Confidence 47999999999 999988889999999999999999999999999999999999999988653
No 137
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.77 E-value=8.1e-09 Score=81.23 Aligned_cols=64 Identities=8% Similarity=0.196 Sum_probs=55.8
Q ss_pred cccccccCeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEec
Q psy9829 213 DFGIILGNKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRR 281 (333)
Q Consensus 213 d~G~~l~~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R 281 (333)
.+|+.+..+ +|.+|.++ ++|++.| |++||+|++|||+++.++++.++.++|+.+.+.+.|+|.+
T Consensus 25 ~lG~~~~~G-~V~~V~~~---spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~v~l~v~p 88 (90)
T 1y7n_A 25 QLGFSVQNG-IICSLMRG---GIAERGG-VRVGHRIIEINGQSVVATPHEKIVHILSNAVGEIHMKTMP 88 (90)
T ss_dssp CCCEEEETT-EEEEECTT---SHHHHHT-CCSSCEEEEETTEECTTSCHHHHHHHHHHCCEEEEEEEEC
T ss_pred ccCeEecCC-EEEEECCC---CHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 345544345 89999999 8888887 9999999999999999999999999999988999999865
No 138
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=98.77 E-value=5.2e-09 Score=81.45 Aligned_cols=61 Identities=20% Similarity=0.251 Sum_probs=53.4
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
.+++|.+|.++ ++|++.| |++||+|++|||+++.+++++|+.++|+.+.+.+.|+|.|...
T Consensus 27 ~g~~V~~V~~~---spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 87 (91)
T 2vsp_A 27 PGSFIKEVQKG---GPADLAG-LEDEDVIIEVNGVNVLDEPYEKVVDRIQSSGKNVTLLVCGKKA 87 (91)
T ss_dssp SCCBC-CCCTT---SHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHTTSCSEEEEEEEC---
T ss_pred CCeEEEEECCC---ChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEeCCc
Confidence 36899999999 8888877 9999999999999999999999999999998899999998753
No 139
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.77 E-value=1.9e-08 Score=79.85 Aligned_cols=61 Identities=10% Similarity=0.277 Sum_probs=55.6
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
.+++|.+|.++ ++|++.| |++||+|++|||+.+.+++++++..+|+.+.+.+.|+|.|+..
T Consensus 30 ~g~~V~~V~~~---spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 90 (102)
T 2d90_A 30 KGQIIKDIEPG---SPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTLLVLDKEA 90 (102)
T ss_dssp SSEEEECCCTT---STTTTTT-CCTTCEEEEESSCBCTTSCHHHHHHHHHHSTTEEEEEECSTTC
T ss_pred CCEEEEEECCC---CHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECCC
Confidence 46999999999 8887776 9999999999999999999999999999989999999988653
No 140
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.77 E-value=1.6e-08 Score=80.10 Aligned_cols=63 Identities=24% Similarity=0.397 Sum_probs=56.9
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPRPT 287 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~~~ 287 (333)
.+++|.+|.++ ++|++.| |++||+|++|||+.+.+++++++..+++. .+.+.|+|.|+...+.
T Consensus 36 ~gv~V~~V~~~---spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~-~~~v~l~v~R~g~~p~ 98 (100)
T 2eeh_A 36 LGIFVSKVEEG---SSAERAG-LCVGDKITEVNGLSLESTTMGSAVKVLTS-SSRLHMMVRRMGSGPS 98 (100)
T ss_dssp CCEEEEEECTT---SHHHHHT-CCSSCEEEEETTEECSSCCHHHHHHHHHS-CSSEEEEEEECSCCCC
T ss_pred CCEEEEEECCC---CHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhcC-CCEEEEEEEECCcCCC
Confidence 47999999999 8888777 99999999999999999999999999998 7899999999876543
No 141
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.77 E-value=1.2e-08 Score=84.06 Aligned_cols=61 Identities=30% Similarity=0.413 Sum_probs=56.1
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhc--CCceEEEEeccC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS--KEKLSLTIRREV 283 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s--~~~v~L~V~R~~ 283 (333)
.+++|.+|.++ ++|++.|+|++||+|++|||+++.+++++++.++|+.+ .+.+.|+|.|+.
T Consensus 58 ~gv~V~~V~~g---spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g 120 (121)
T 2kom_A 58 APIYVKNILPR---GAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRSTKMEGTVSLLVFRQE 120 (121)
T ss_dssp CCEEEEEECTT---SHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHCCSSCEEEEEEEECC
T ss_pred CCEEEEEECCC---ChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEeCC
Confidence 46999999999 89988888999999999999999999999999999986 578999998864
No 142
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.77 E-value=1.2e-08 Score=79.93 Aligned_cols=61 Identities=23% Similarity=0.329 Sum_probs=55.5
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
.+++|.+|.++ ++|++.| |++||+|++|||+.+.++++.++..+++...+.+.|+|.|+..
T Consensus 32 ~~v~V~~V~~~---spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g~ 92 (94)
T 2eeg_A 32 APLTISRVHAG---SKAALAA-LCPGDLIQAINGESTELMTHLEAQNRIKGCHDHLTLSVSSGPS 92 (94)
T ss_dssp SCCEECCCCSS---SHHHHTT-CCTTCEEEEETTEETTTCCHHHHHHHHHTCCSCEEEEEECCSS
T ss_pred CCEEEEEECCC---CHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCC
Confidence 46899999999 8888776 9999999999999999999999999999988899999998753
No 143
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.76 E-value=1.2e-08 Score=85.62 Aligned_cols=60 Identities=22% Similarity=0.336 Sum_probs=56.2
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhc--CCceEEEEecc
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS--KEKLSLTIRRE 282 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s--~~~v~L~V~R~ 282 (333)
.+++|.+|.++ ++|++.|+|++||+|++|||+++.+++++|++++|+.. .+.|.|+|.|+
T Consensus 49 ~~v~V~~V~~g---spA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~~v~l~V~R~ 110 (126)
T 1wif_A 49 PYLQISHLINK---GAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIGTVLQIKAYRG 110 (126)
T ss_dssp TEEEECCCCTT---SSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSCEEEEEEESS
T ss_pred CcEEEEEECCC---CHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 46999999999 99999999999999999999999999999999999984 57899999998
No 144
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.76 E-value=1.9e-08 Score=88.10 Aligned_cols=75 Identities=13% Similarity=0.071 Sum_probs=61.5
Q ss_pred ceeeEEEecccC---CCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhh
Q psy9829 88 STFVGSVLGARG---ALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRI 161 (333)
Q Consensus 88 ~~~g~~i~gg~d---~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~ 161 (333)
.||||+|.||.| .|+.. .+.++||++|.||| ||+. +||+||+ +.||+.++.++. .++.+++.
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~-~~~g~~V~~v~~~s---------pA~~--gl~~GD~I~~vng~~v~~~~~~~~~~~~~~ 69 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRP-DDDGIFVTRVQPEG---------PASK--LLQPGDKIIQANGYSFINIEHGQAVSLLKT 69 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCT-TCCSEEEEEECTTS---------TTTT--TCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred CcccEEEECCcCCCCCcccc-CCCCEEEEEECCCC---------hHHh--CCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 589999999874 67654 68999999999976 5565 5899999 589999999985 55667777
Q ss_pred cCCceEEEEEEee
Q psy9829 162 AHNCISAQIKRTH 174 (333)
Q Consensus 162 ~g~~v~L~v~R~~ 174 (333)
.+..+.|.|.|+.
T Consensus 70 ~~~~v~l~v~r~~ 82 (195)
T 2qbw_A 70 FQNTVELIIVREV 82 (195)
T ss_dssp CCSEEEEEEEEEC
T ss_pred CCCeEEEEEEEcC
Confidence 8889999998843
No 145
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.76 E-value=1e-08 Score=80.33 Aligned_cols=63 Identities=29% Similarity=0.432 Sum_probs=56.4
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPRP 286 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~~ 286 (333)
.+++|.+|.++ ++|++- .|++||+|++|||+.+.+++++++.++|+...+.+.|+|.|+....
T Consensus 30 ~g~~V~~V~~~---spA~~a-GL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~g~~~ 92 (94)
T 1vb7_A 30 TPIIVTKVTER---GKAEAA-DLRPGDIIVAINGQSAENMLHAEAQSKIRQSASPLRLQLDRSSGPS 92 (94)
T ss_dssp EEEECCCBCTT---SSHHHH-TCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSSEEEEEECCCCCC
T ss_pred CCeEEEEECCC---CHHHHC-CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEECCcCC
Confidence 37999999999 777754 4999999999999999999999999999998899999999986543
No 146
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.76 E-value=8.2e-09 Score=84.21 Aligned_cols=60 Identities=17% Similarity=0.254 Sum_probs=55.1
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
.++||.+|.++ ++|+ +.|++||+|++|||+++.++++.++..+|+.+.+.+.|+|.|...
T Consensus 46 ~gv~V~~V~~~---spA~--~gL~~GD~I~~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~ 105 (117)
T 2csj_A 46 TSIVISDVLPG---GPAD--GLLQENDRVVMVNGTPMEDVLHSFAVQQLRKSGKIAAIVVKRPRK 105 (117)
T ss_dssp CBCEEEEECTT---SSHH--HHBCTTCEEEEESSCBCBTCCHHHHHHHHHHSCSEEEEEEEEEEE
T ss_pred CCEEEEEECCC---Cccc--ccCCCCCEEEEECCEECCCcCHHHHHHHHhcCCCeEEEEEEECCc
Confidence 46999999999 7774 789999999999999999999999999999999999999999753
No 147
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.76 E-value=1.1e-08 Score=79.65 Aligned_cols=61 Identities=21% Similarity=0.391 Sum_probs=56.9
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREV 283 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~ 283 (333)
.+++|.+|.++ ++|++.|+|++||+|++|||+++.++++.++..+++...+.+.|+|.|+.
T Consensus 33 ~~~~V~~v~~~---s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~g 93 (97)
T 2iwn_A 33 SGIFVKSITKS---SAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 93 (97)
T ss_dssp CCCEEEEECTT---CHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHTCCSEEEEEEEEEE
T ss_pred CCEEEEEeCCC---ChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 47999999999 88888888999999999999999999999999999998899999998875
No 148
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.75 E-value=1.1e-08 Score=81.48 Aligned_cols=61 Identities=23% Similarity=0.413 Sum_probs=56.2
Q ss_pred eEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCC
Q psy9829 221 KIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 285 (333)
Q Consensus 221 ~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~ 285 (333)
+++|.+|.++ ++|++.| |++||+|++|||+.+.++++.++..+++...+.+.|+|.|+...
T Consensus 30 ~v~V~~V~~~---spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g~~ 90 (103)
T 1wf7_A 30 PLTISSLKDG---GKASQAH-VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRASAA 90 (103)
T ss_dssp EEEECCCCTT---CHHHHTT-CCTTCBEEEETTEECSSCCHHHHHHHHHHCSSEEEEEECCCSCC
T ss_pred CEEEEEECCC---CHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCCc
Confidence 5899999999 8888887 99999999999999999999999999999989999999997653
No 149
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.75 E-value=1.8e-08 Score=81.01 Aligned_cols=63 Identities=22% Similarity=0.362 Sum_probs=57.6
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPRP 286 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~~ 286 (333)
.+++|.+|.++ ++|++.| |++||+|++|||+.+.++++.++...++...+.+.|+|.|+....
T Consensus 46 ~g~~V~~V~~~---spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~ 108 (110)
T 1x5q_A 46 EGIFISRVSEE---GPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRGAGTAVQMRVWRESGPS 108 (110)
T ss_dssp CSEEEEEECTT---SHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHSCCSEEEEEEEECSSCC
T ss_pred CCEEEEEECCC---CHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHhhCCCCeEEEEEEECCccC
Confidence 57999999999 8888877 999999999999999999999999999998999999999987543
No 150
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.75 E-value=7.9e-09 Score=82.14 Aligned_cols=64 Identities=19% Similarity=0.250 Sum_probs=57.3
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPRPT 287 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~~~ 287 (333)
.+++|.+|.++ ++|++.| |++||+|++|||+.+.++++.++.++|+...+.+.|+|.|+..+.+
T Consensus 36 ~~~~V~~V~~~---spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~~s~ 99 (100)
T 1whd_A 36 SPVRVQAVDSG---GPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILLVWRVSGPSS 99 (100)
T ss_dssp SSCBCCBCCTT---SHHHHHT-CCSSCEEEEETTEECTTCCHHHHHHHHHHCSSEEEEEEEECCSSCC
T ss_pred CCEEEEEECCC---CHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCCCCC
Confidence 46899999999 8887765 9999999999999999999999999999988889999999875543
No 151
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=98.75 E-value=8.7e-09 Score=80.44 Aligned_cols=60 Identities=10% Similarity=0.262 Sum_probs=55.3
Q ss_pred eEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 221 KIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 221 ~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
++||..|.++ ++|++.| |++||+|++|||+.+.+++|+++..+|+.+.+.+.+++.|...
T Consensus 30 ~~~V~~v~~~---spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~~~r~~~ 89 (95)
T 3r68_A 30 GQIIKDIEPG---SPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTLLVLDKEL 89 (95)
T ss_dssp SEEEECCCTT---SHHHHHT-CCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEEECC-
T ss_pred CEEEEEECCC---CHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEECCcc
Confidence 7999999999 8888887 9999999999999999999999999999999999998877653
No 152
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=98.74 E-value=9.3e-09 Score=86.11 Aligned_cols=78 Identities=14% Similarity=0.116 Sum_probs=62.5
Q ss_pred cccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhh
Q psy9829 85 PVGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRI 161 (333)
Q Consensus 85 E~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~ 161 (333)
+.+.+|||.|.||.+.+. ++.++||++|.|||.| +..++|++||+ +.||++++.+++ .++.+|+.
T Consensus 45 ~~~~~lG~~i~gg~~~~~---~~~gv~V~~V~~gspA---------~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~ 112 (131)
T 1wfg_A 45 DSGAMLGLKVVGGKMTES---GRLCAFITKVKKGSLA---------DTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILE 112 (131)
T ss_dssp CSCTTTTEEEEEEEECSS---SCEEEEEEEECTTSHH---------HHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred CCCCCCCEEEecCccCCC---CCCCEEEEEECCCChH---------HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 346799999999999875 6889999999997754 54444799999 689999999874 55667777
Q ss_pred cC--CceEEEEEEee
Q psy9829 162 AH--NCISAQIKRTH 174 (333)
Q Consensus 162 ~g--~~v~L~v~R~~ 174 (333)
+. ..++|+|.|..
T Consensus 113 ~~~g~~v~l~v~R~g 127 (131)
T 1wfg_A 113 SKPEPQVELVVSRSG 127 (131)
T ss_dssp TSSSSEEEEEEEEEC
T ss_pred cCCCCEEEEEEEcCC
Confidence 54 78999998854
No 153
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=98.73 E-value=2.4e-08 Score=78.21 Aligned_cols=62 Identities=23% Similarity=0.370 Sum_probs=56.6
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~ 285 (333)
.+++|.+|.++ ++|++.| |++||+|++|||+.+.++++.++...++...+.+.|+|.|+...
T Consensus 34 ~g~~V~~V~~~---spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g~~ 95 (97)
T 2w4f_A 34 EGIFISRVSEE---GPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRGAGTAVQMRVWRERET 95 (97)
T ss_dssp CSEEEEEECTT---SHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEECCSSC
T ss_pred CCEEEEEECCC---ChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhCCCCeEEEEEEeCCcc
Confidence 57999999999 8888877 99999999999999999999999999988899999999998643
No 154
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=98.73 E-value=1.9e-08 Score=79.61 Aligned_cols=78 Identities=13% Similarity=0.126 Sum_probs=62.1
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
..+|||.+.||.+.++.. .+.+++|++|.+||.| +..+.|++||+ +.||+..+.+.+ ....+++..+
T Consensus 17 ~~~lG~~l~~g~~~~~~~-~~~gv~V~~V~~~spA---------~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 86 (101)
T 2jik_A 17 PSGLGFNIVGGTDQQYVS-NDSGIYVSRIKENGAA---------ALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAG 86 (101)
T ss_dssp TTCCCEEEEECTTSCSBT-TBCCEEEEEECTTSHH---------HHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHTCC
T ss_pred CCCCCEEEeccccCCCcc-CCCCEEEEEECCCCHH---------HHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 469999999999998764 6789999999998755 43223799999 589999999874 4445666678
Q ss_pred CceEEEEEEee
Q psy9829 164 NCISAQIKRTH 174 (333)
Q Consensus 164 ~~v~L~v~R~~ 174 (333)
..++|.|.|..
T Consensus 87 ~~v~l~v~R~~ 97 (101)
T 2jik_A 87 YAVSLRVQHRL 97 (101)
T ss_dssp SEEEEEEEEES
T ss_pred CeEEEEEEeCC
Confidence 88999998853
No 155
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.73 E-value=3.9e-09 Score=87.41 Aligned_cols=62 Identities=26% Similarity=0.401 Sum_probs=57.3
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~ 285 (333)
.+++|.+|.++ ++|++.| |++||+|++|||+++.++++++++++|+.+.+.+.|+|.|....
T Consensus 61 ~gv~V~~V~~~---spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~~ 122 (126)
T 2yuy_A 61 DTIFVKQVKEG---GPAFEAG-LCTGDRIIKVNGESVIGKTYSQVIALIQNSDTTLELSVMPKDSG 122 (126)
T ss_dssp CCCCBCCCCSS---SHHHHHT-CCSSCCCCEETTEECSSCCHHHHHHHHHTCTTEEEEECCCCCCC
T ss_pred CCEEEEEECCC---ChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECCCC
Confidence 46999999999 8888887 99999999999999999999999999999999999999987654
No 156
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=98.73 E-value=2.1e-08 Score=80.68 Aligned_cols=63 Identities=14% Similarity=0.250 Sum_probs=56.7
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPRP 286 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~~ 286 (333)
.++||..|.++ ++|++.| |++||+|++|||+.+.+++|+++..+|+.+.+.+.|+|.|..+.+
T Consensus 45 ~gv~V~~V~~~---spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~~~~~~p 107 (109)
T 1q3o_A 45 ALQYLESVDEG---GVAWRAG-LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHP 107 (109)
T ss_dssp SSEEEEEECTT---SHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEEEEEEEECC-
T ss_pred CCEEEEEECCC---CHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEEEECCCCC
Confidence 36999999999 8888887 999999999999999999999999999998899999998876543
No 157
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.72 E-value=9.4e-09 Score=81.69 Aligned_cols=61 Identities=30% Similarity=0.394 Sum_probs=56.0
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
.+++|.+|.++ ++|++.|.|++||+|++|||+++.++ +.++..+++.+.+.+.|+|.|+..
T Consensus 35 ~~v~V~~V~~~---spA~~agGL~~GD~I~~ing~~v~~~-~~~~~~~~~~~~~~v~l~v~R~~~ 95 (100)
T 2edp_A 35 EPLTVSKIEDG---GKAALSQKMRTGDELVNINGTPLYGS-RQEALILIKGSFRILKLIVRRRNS 95 (100)
T ss_dssp EEEEECCCCTT---SHHHHHTSCCTTCEEEEETTEECCSC-SHHHHHHHHTCCSSCEEEEEECCC
T ss_pred CCeEEEEECCC---CHHHHcCCCCCCCEEEEECCEEccch-HHHHHHHHHhCCCeEEEEEEeCCC
Confidence 36999999999 99988888999999999999999887 899999999998999999999864
No 158
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=98.72 E-value=4.8e-09 Score=86.60 Aligned_cols=75 Identities=16% Similarity=0.111 Sum_probs=60.7
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
+.+|||.|.||.+.+. .+.++||++|.|||.| +...+|++||+ +.||+.++.+++ .++.+++.++
T Consensus 35 ~~~lGf~i~gg~~~~~---~~~~~~V~~V~~~spA---------~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~ 102 (120)
T 2iwo_A 35 TDSLGISIAGGVGSPL---GDVPIFIAMMHPTGVA---------AQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKNAS 102 (120)
T ss_dssp --CCCEEEEEEEEETT---EEEEEEEEEECTTSHH---------HHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHHCC
T ss_pred CCCCCEEEecccCCCC---CCCCEEEEEECCCCHH---------HHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 3599999999999886 4689999999997754 44335799999 689999999975 5566778888
Q ss_pred CceEEEEEEe
Q psy9829 164 NCISAQIKRT 173 (333)
Q Consensus 164 ~~v~L~v~R~ 173 (333)
..++|.|.|.
T Consensus 103 ~~v~l~v~r~ 112 (120)
T 2iwo_A 103 GSIEMQVVAG 112 (120)
T ss_dssp SEEEEEEECC
T ss_pred CeEEEEEEEC
Confidence 8899999873
No 159
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=98.72 E-value=9.4e-09 Score=80.82 Aligned_cols=78 Identities=9% Similarity=-0.054 Sum_probs=63.3
Q ss_pred ccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhc
Q psy9829 86 VGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIA 162 (333)
Q Consensus 86 ~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~ 162 (333)
...+|||+|.||.+.++....+.+++|++|.|||.| +..+.|++||+ +.||+..+++.+ ....+++..
T Consensus 15 ~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA---------~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 85 (98)
T 1ihj_A 15 GKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPA---------HLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEA 85 (98)
T ss_dssp TSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHH---------HHHCSCCTTCEEEEETTEECTTCCHHHHHHHHHHS
T ss_pred CCCCcCEEEeccccCCccccCCCCEEEEEECCCCHH---------HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 467999999999998875446789999999997754 44323799999 589999999983 456677778
Q ss_pred CCceEEEEEE
Q psy9829 163 HNCISAQIKR 172 (333)
Q Consensus 163 g~~v~L~v~R 172 (333)
+..++|.|.|
T Consensus 86 g~~v~l~v~R 95 (98)
T 1ihj_A 86 DFKIELEIQT 95 (98)
T ss_dssp CSEEEEEEEE
T ss_pred CCeEEEEEEe
Confidence 8899999988
No 160
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.72 E-value=2.6e-08 Score=78.54 Aligned_cols=60 Identities=22% Similarity=0.237 Sum_probs=55.9
Q ss_pred eEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 221 KIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 221 ~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
+++|.++.++ ++|++.| |++||+|++|||+.+.+++++++..+|+...+.+.|+|.|...
T Consensus 35 g~~V~~V~~~---spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 94 (99)
T 3khf_A 35 HHVVWSVEDG---SPAQEAG-LRAGDLITHINGESVLGLVHMDVVELLLKSGNKISLRTTALEN 94 (99)
T ss_dssp EEEEEEECTT---SHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEECSCS
T ss_pred CeEEEEECCC---CHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCEEEEEEEECCC
Confidence 6899999999 8888777 9999999999999999999999999999999999999998754
No 161
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=98.72 E-value=1.5e-08 Score=80.80 Aligned_cols=60 Identities=17% Similarity=0.255 Sum_probs=55.6
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREV 283 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~ 283 (333)
.++||..|.++ ++|++.| |++||+|++|||+++.++++.++..+|+.+.+.+.|+|.|+.
T Consensus 26 ~g~~V~~V~~~---spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~ 85 (106)
T 3ngh_A 26 DGHLIRVIEEG---SPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVTLLVLDGD 85 (106)
T ss_dssp CSCEEECCCTT---SHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHTTTEEEEEEECHH
T ss_pred CCEEEEEeCCC---CHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEEEECC
Confidence 36899999999 8888877 999999999999999999999999999999999999999864
No 162
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=98.71 E-value=7.4e-09 Score=86.17 Aligned_cols=78 Identities=17% Similarity=0.076 Sum_probs=63.1
Q ss_pred ccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhc
Q psy9829 86 VGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIA 162 (333)
Q Consensus 86 ~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~ 162 (333)
...||||.|.|+.+... +.+.+|||++|.+|| ||+..++|++||+ +.||++++.+++ .++.+|+.+
T Consensus 35 ~~~glG~~i~~~~~~~~--~~~~gi~V~~V~~gs---------pA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 103 (127)
T 1wg6_A 35 GSAGLGVSLKGNKSRET--GTDLGIFIKSIIHGG---------AAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRS 103 (127)
T ss_dssp TTTCCCCEEEEEEETTT--TEEEEEEEEECCSSS---------STHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHH
T ss_pred CCCccCeEEecccCCCC--CCCCCEEEEEECCCC---------HHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHh
Confidence 35799999999998743 357899999999976 4555445799999 589999999986 677788865
Q ss_pred -------CCceEEEEEEee
Q psy9829 163 -------HNCISAQIKRTH 174 (333)
Q Consensus 163 -------g~~v~L~v~R~~ 174 (333)
+..|+|.|.|..
T Consensus 104 ~~~~g~~~~~v~l~v~R~~ 122 (127)
T 1wg6_A 104 MSMEGNIRGMIQLVILRRS 122 (127)
T ss_dssp HHHHHHHTCEEEEEEEECS
T ss_pred hccccCCCCEEEEEEEeCC
Confidence 778999998854
No 163
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=98.71 E-value=1.4e-08 Score=84.12 Aligned_cols=76 Identities=11% Similarity=0.066 Sum_probs=61.5
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeecc-Ccc--hhhhhhhhc
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHN-GVV--GSWQVFRIA 162 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~-gv~--~a~~alr~~ 162 (333)
..+|||.|.||.+... ++.++||++|.+||.| +..++|++||+ +.||++++. +++ .++.+++..
T Consensus 36 ~~~lG~~i~g~~~~~~---~~~gv~V~~V~~~spA---------~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~~ 103 (128)
T 2db5_A 36 TGGLGFSVVALRSQNL---GKVDIFVKDVQPGSVA---------DRDQRLKENDQILAINHTPLDQNISHQQAIALLQQT 103 (128)
T ss_dssp SSCCCCEEEEEECSSS---SCEEEEEECCCTTSHH---------HHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHHC
T ss_pred CCccCEEEecccCCCC---CCCCEEEEEECCCCHH---------HHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcC
Confidence 3699999999998865 5789999999997654 44334799999 589999997 765 556677778
Q ss_pred CCceEEEEEEee
Q psy9829 163 HNCISAQIKRTH 174 (333)
Q Consensus 163 g~~v~L~v~R~~ 174 (333)
+..++|.|.|..
T Consensus 104 ~~~v~l~v~r~~ 115 (128)
T 2db5_A 104 TGSLRLIVAREP 115 (128)
T ss_dssp CSEEEEEEEECC
T ss_pred CCeEEEEEEcCC
Confidence 889999998853
No 164
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.71 E-value=1.5e-08 Score=81.25 Aligned_cols=77 Identities=16% Similarity=0.040 Sum_probs=60.4
Q ss_pred cceeeEEEec---ccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhh
Q psy9829 87 GSTFVGSVLG---ARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFR 160 (333)
Q Consensus 87 G~~~g~~i~g---g~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr 160 (333)
..+|||.|.| |.+.+. .+.++||++|.|||.| +..++|++||+ +.||+.++.+++ .++.+++
T Consensus 19 ~~glG~~i~~~~~g~~~~~---~~~gv~V~~V~~~spA---------~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 86 (107)
T 1wf8_A 19 EDGLGISIIGMGVGADAGL---EKLGIFVKTVTEGGAA---------QRDGRIQVNDQIVEVDGISLVGVTQNFAATVLR 86 (107)
T ss_dssp TTBSCEEEEEEEESCCTTC---CEEEEEEEEECTTCHH---------HHHCSSCTTCBEEEETTEECBSCCHHHHHHHHH
T ss_pred CCcccEEEEecCCCCCCCC---CCCCEEEEEeCCCCHH---------HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 5699999999 555443 5789999999997754 44434799999 589999999875 4456677
Q ss_pred hcCCceEEEEEEeec
Q psy9829 161 IAHNCISAQIKRTHF 175 (333)
Q Consensus 161 ~~g~~v~L~v~R~~~ 175 (333)
..+..++|.|.|...
T Consensus 87 ~~~~~v~l~v~R~~~ 101 (107)
T 1wf8_A 87 NTKGNVRFVIGREKP 101 (107)
T ss_dssp HCCSEEEEEEEEECC
T ss_pred cCCCeEEEEEEeCCC
Confidence 788899999998653
No 165
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.71 E-value=2.2e-08 Score=86.87 Aligned_cols=63 Identities=19% Similarity=0.276 Sum_probs=59.2
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~ 285 (333)
.++||.+|.|+ ++|++.|+|++||+|++|||+++.++++.++..+++...+.+.|+|.|+.+.
T Consensus 35 ~g~~V~~V~~~---spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~r~~~~ 97 (196)
T 3gsl_A 35 PSIFITKIIPG---GAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRRKPP 97 (196)
T ss_dssp CCEEEEEECTT---SHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEEEECCC
T ss_pred CCEEEEEECCC---ChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEecCCC
Confidence 47999999999 9999999999999999999999999999999999999999999999997644
No 166
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.71 E-value=2.3e-08 Score=81.17 Aligned_cols=60 Identities=17% Similarity=0.255 Sum_probs=55.6
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREV 283 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~ 283 (333)
.+++|.+|.++ ++|++.| |++||+|++|||+.+.+++++++.++|+...+.+.|+|.|+.
T Consensus 38 ~g~~V~~V~~~---spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~ 97 (114)
T 2edz_A 38 DGHLIRVIEEG---SPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVTLLVLDGD 97 (114)
T ss_dssp CSCEEECCCTT---CTTGGGT-CCTTCEEEEESSSBCSSSCHHHHHHHHHHTCSEEEEEEECHH
T ss_pred CCeEEEEeCCC---ChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECC
Confidence 47999999999 8888777 999999999999999999999999999998899999999864
No 167
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=98.70 E-value=1.6e-08 Score=88.71 Aligned_cols=76 Identities=18% Similarity=0.086 Sum_probs=60.8
Q ss_pred cceeeEEEec-ccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhc
Q psy9829 87 GSTFVGSVLG-ARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIA 162 (333)
Q Consensus 87 G~~~g~~i~g-g~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~ 162 (333)
..||||.|.| |.+.+.- ..+.+|||++|.+||.| +..++|++||+ +.||++++.+++ .++.+|+.+
T Consensus 90 ~~glG~~i~g~~~g~~~~-~~~~gi~V~~V~~gspA---------~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~~ 159 (170)
T 3egg_C 90 SEGLGISIIGMGAGADMG-LEKLGIFVKTVTEGGAA---------HRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNT 159 (170)
T ss_dssp TTBSSEEEEEECSSSSCC-SSSBEEEEEEECTTSHH---------HHHCCCCTTCEEEEETTEECTTBCHHHHHHHHHHC
T ss_pred CCeEeEEEEecccCCccc-cCCCCEEEEEECCCChH---------HHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 4699999999 4444432 36889999999997754 44445799999 689999999885 567788888
Q ss_pred CCceEEEEEE
Q psy9829 163 HNCISAQIKR 172 (333)
Q Consensus 163 g~~v~L~v~R 172 (333)
+..|+|+|+|
T Consensus 160 g~~v~L~V~R 169 (170)
T 3egg_C 160 KGRVRFMIGR 169 (170)
T ss_dssp CSEEEEEEEE
T ss_pred CCEEEEEEEe
Confidence 9999999988
No 168
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=98.70 E-value=1.6e-08 Score=79.24 Aligned_cols=77 Identities=17% Similarity=0.146 Sum_probs=62.4
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcch--hhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVVG--SWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~~--a~~alr~~g 163 (333)
..||||+|.||.+.+++.+.+.+++|++|.|||.| +.. +|++||+ +.+|+..+++... ...+++..+
T Consensus 13 ~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA---------~~a-Gl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g 82 (97)
T 2w4f_A 13 TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPA---------ARA-GVRVGDKLLEVNGVALQGAEHHEAVEALRGAG 82 (97)
T ss_dssp TTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHH---------HHH-TCCTTCEEEEETTEECTTCCHHHHHHHHHTSC
T ss_pred CCceeEEEECCccCCcccCCCCCEEEEEECCCChH---------HHc-CCCCCCEEEEECCEECCCcCHHHHHHHHhCCC
Confidence 56999999999999888777899999999997754 432 3799999 6899999999863 334455578
Q ss_pred CceEEEEEEe
Q psy9829 164 NCISAQIKRT 173 (333)
Q Consensus 164 ~~v~L~v~R~ 173 (333)
..+.|.|.|.
T Consensus 83 ~~v~l~v~R~ 92 (97)
T 2w4f_A 83 TAVQMRVWRE 92 (97)
T ss_dssp SEEEEEEECC
T ss_pred CeEEEEEEeC
Confidence 8899999883
No 169
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.70 E-value=1.8e-08 Score=80.45 Aligned_cols=61 Identities=11% Similarity=0.267 Sum_probs=55.9
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
.++||.+|.++ ++|++.| |++||+|++|||+++.++++.++..+++.+.+.+.|+|.|...
T Consensus 32 ~g~~V~~V~~~---spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~~~ 92 (106)
T 2eei_A 32 KGVYMTDITPQ---GVAMRAG-VLADDHLIEVNGENVEDASHEEVVEKVKKSGSRVMFLLVDKET 92 (106)
T ss_dssp CSCEECCCCTT---SHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHHCSEEEEEECCTTT
T ss_pred CCEEEEEECCC---CHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEcCch
Confidence 46999999999 8888877 9999999999999999999999999999999999999988754
No 170
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.69 E-value=3.6e-08 Score=86.36 Aligned_cols=57 Identities=23% Similarity=0.337 Sum_probs=54.5
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEec
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRR 281 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R 281 (333)
.++||.+|.++ ++|++ .|++||+|++|||+++.+++|.++..+++.+.+.+.|+|.|
T Consensus 24 ~g~~V~~v~~~---spA~~--gl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r 80 (195)
T 2qbw_A 24 DGIFVTRVQPE---GPASK--LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVR 80 (195)
T ss_dssp CSEEEEEECTT---STTTT--TCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEEE
T ss_pred CCEEEEEECCC---ChHHh--CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 57999999999 99988 69999999999999999999999999999999999999999
No 171
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.69 E-value=6.4e-08 Score=76.57 Aligned_cols=59 Identities=25% Similarity=0.367 Sum_probs=51.9
Q ss_pred eEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhc--CCceEEEEeccCCC
Q psy9829 221 KIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS--KEKLSLTIRREVPR 285 (333)
Q Consensus 221 ~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s--~~~v~L~V~R~~~~ 285 (333)
++||.++.++ | ..+.|++||+|++|||+++.+++|+|++++|+.+ .+.+.|+|.|+...
T Consensus 33 Gv~V~~v~~~-----a-~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g~~ 93 (96)
T 1ujv_A 33 GQRVKQILDI-----Q-GCPGLCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSETSLIIHRGSGP 93 (96)
T ss_dssp EEEEEEESCG-----G-GSTTCCSSCEEEEETTEECSSCCHHHHHHHHHHSCTTSEEEEEEECCSSC
T ss_pred CEEEEEEecc-----c-ccCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEECCCC
Confidence 6999999984 2 3568999999999999999999999999999996 57899999998654
No 172
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=98.69 E-value=8.2e-09 Score=84.81 Aligned_cols=75 Identities=12% Similarity=0.147 Sum_probs=60.6
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
..||||++.||.+.|. ++.+++|++|.|||. |+..++|++||+ +.||+.++.+.+ ..+.+++..+
T Consensus 35 ~~glGf~l~~g~~~~~---~~~gv~V~~V~~~sp---------A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 102 (117)
T 2fne_A 35 PDGLGFSIVGGYGSPH---GDLPIYVKTVFAKGA---------ASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTK 102 (117)
T ss_dssp TTBTSEEEEEEEEETT---EEEEEEEEEECTTSH---------HHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred CCcccEEEecccCCCC---CCCCEEEEEECCCCh---------HHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 4699999999999875 578999999999765 444334799999 589999999764 5566777777
Q ss_pred CceEEEEEEe
Q psy9829 164 NCISAQIKRT 173 (333)
Q Consensus 164 ~~v~L~v~R~ 173 (333)
..++|.|.|.
T Consensus 103 ~~v~l~v~R~ 112 (117)
T 2fne_A 103 GTVTLMVLSS 112 (117)
T ss_dssp SSEEEEEEEC
T ss_pred CeEEEEEEeC
Confidence 8899999883
No 173
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.68 E-value=2.5e-08 Score=81.27 Aligned_cols=61 Identities=15% Similarity=0.244 Sum_probs=56.9
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREV 283 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~ 283 (333)
.+++|.+|.++ ++|++.|.|++||+|++|||+.+.++++.++..+++...+.+.|+|.|..
T Consensus 38 ~gv~V~~V~~~---spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~~ 98 (119)
T 1tp5_A 38 EGIFISFILAG---GPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKP 98 (119)
T ss_dssp CCEEEEEECTT---SHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEEECH
T ss_pred CCEEEEEECCC---CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 47999999999 88888888999999999999999999999999999999999999998864
No 174
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.68 E-value=2.8e-08 Score=87.71 Aligned_cols=63 Identities=24% Similarity=0.306 Sum_probs=59.1
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCC--CCHHHHHHHHHhcCCc-eEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDG--MSVKEARKLIDSSKEK-LSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~--~s~~eA~~~l~~s~~~-v~L~V~R~~~~ 285 (333)
.++||.+|.++ ++|++.|+|+.||+|++|||+.+.+ +++.++..+++.+.+. +.|+|.|+...
T Consensus 45 ~g~~V~~V~~~---spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~~~~~v~l~v~R~~~~ 110 (206)
T 3r0h_A 45 TGCVITHVYPE---GQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHTTYEKAVTLTVFRADPP 110 (206)
T ss_dssp SCEEEEEECTT---SHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHHSCCSSEEEEEEECCSSC
T ss_pred CCeEEEEECCC---ChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHHhcCCCceEEEEEecccC
Confidence 47999999999 9999999999999999999999999 9999999999999998 99999997654
No 175
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.68 E-value=1.9e-08 Score=80.86 Aligned_cols=61 Identities=15% Similarity=0.236 Sum_probs=56.7
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREV 283 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~ 283 (333)
.+++|.+|.++ ++|++.|+|++||+|++|||+.+.++++.++..+++...+.+.|+|.|+.
T Consensus 39 ~gv~V~~V~~~---s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~~ 99 (113)
T 1um7_A 39 EGIFVSFILAG---GPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQYRP 99 (113)
T ss_dssp CCCBCCCBCSS---SHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHSCCSEEEEEEECCH
T ss_pred CCEEEEEECCC---CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEECc
Confidence 47999999999 89988888999999999999999999999999999998999999998864
No 176
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.67 E-value=2.6e-08 Score=88.18 Aligned_cols=60 Identities=18% Similarity=0.319 Sum_probs=56.6
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
.++||.+|.++ ++|++.| |++||+|++|||.++.+++++++..+|+. .+.+.|+|.|...
T Consensus 110 ~~~~V~~V~~g---spA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~l~~-~~~v~l~v~r~g~ 169 (192)
T 3k1r_A 110 CGLFISHLIKG---GQADSVG-LQVGDEIVRINGYSISSCTHEEVINLIRT-EKTVSIKVRHIGL 169 (192)
T ss_dssp EEEEEEEECTT---SHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHTS-SSEEEEEEEECCE
T ss_pred CCEEEEEECCC---ChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHcC-CCeEEEEEEECCc
Confidence 47999999999 9999998 99999999999999999999999999999 8999999999765
No 177
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.66 E-value=1.6e-08 Score=81.39 Aligned_cols=76 Identities=9% Similarity=-0.049 Sum_probs=59.6
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhc-
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIA- 162 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~- 162 (333)
..||||.|.||.+ |.. ..+.++||++|.|||+| +..++|++||+ +.||+.++.+.+ .++.+++..
T Consensus 25 ~~glG~~i~~~~~-~~~-~~~~g~~V~~v~~~spA---------~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 93 (108)
T 2d92_A 25 CKGLGFSILDYQD-PLD-PTRSVIVIRSLVADGVA---------ERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAVP 93 (108)
T ss_dssp SSCCSEEEEEEEC-SSC-TTCEEEEEEEECTTCHH---------HHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHSC
T ss_pred CCccCEEEecccc-cCC-CCCCCEEEEEECCCCHH---------HHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 5699999999988 332 36899999999997654 44334799999 689999998865 566677774
Q ss_pred CCceEEEEEEe
Q psy9829 163 HNCISAQIKRT 173 (333)
Q Consensus 163 g~~v~L~v~R~ 173 (333)
+..++|+|.|.
T Consensus 94 ~~~v~l~v~R~ 104 (108)
T 2d92_A 94 PGLVHLGICSG 104 (108)
T ss_dssp SEEEEEEEECC
T ss_pred CCeEEEEEEcC
Confidence 56899999873
No 178
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=98.66 E-value=2.1e-08 Score=80.95 Aligned_cols=75 Identities=16% Similarity=0.129 Sum_probs=59.0
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhc-
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIA- 162 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~- 162 (333)
+.+|||+|.||.+.+ .+.++||++|.|||.| +..++|++||+ +.||+.++.+++ .++.+|+.+
T Consensus 16 ~~~lG~~i~g~~~~~----~~~gv~V~~V~~~spA---------~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 82 (108)
T 3cbz_A 16 YNFLGISIVGQSNER----GDGGIYIGSIMKGGAV---------AADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIV 82 (108)
T ss_dssp HCCCCEEEEEECSST----TCCEEEEEEECTTSHH---------HHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHH
T ss_pred CCccCEEEEcCcCCC----CCCCEEEEEECCCChH---------HhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Confidence 468999999998742 4789999999997754 44444799999 589999999964 566777766
Q ss_pred --CCceEEEEEEee
Q psy9829 163 --HNCISAQIKRTH 174 (333)
Q Consensus 163 --g~~v~L~v~R~~ 174 (333)
+..++|.|.|..
T Consensus 83 ~~~~~v~l~v~R~~ 96 (108)
T 3cbz_A 83 HKPGPIVLTVAKSG 96 (108)
T ss_dssp TSSSCEEEEEECCC
T ss_pred cCCCeEEEEEEeCC
Confidence 457999998853
No 179
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=98.66 E-value=1.8e-08 Score=80.54 Aligned_cols=77 Identities=13% Similarity=0.112 Sum_probs=61.5
Q ss_pred cccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhh
Q psy9829 85 PVGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRI 161 (333)
Q Consensus 85 E~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~ 161 (333)
....+|||+|.||.+.+. .+.++||++|.|||.| +..++|++||+ +.||+..+.+.+ .++.+++.
T Consensus 18 ~~~~glG~~i~~~~~~~~---~~~gv~V~~V~~~spA---------~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~ 85 (106)
T 3axa_A 18 KKQNGMGLSIVAAKGAGQ---DKLGIYVKSVVKGGAA---------DVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTR 85 (106)
T ss_dssp ECSSSCSEEEEEEECSSC---SSEEEEEEEEBTTSHH---------HHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred CCCCccCEEEEeecCCCC---CCCCEEEEEECCCCHH---------HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 346799999999998765 4789999999997754 44334799999 589999999865 44556667
Q ss_pred cCCceEEEEEEe
Q psy9829 162 AHNCISAQIKRT 173 (333)
Q Consensus 162 ~g~~v~L~v~R~ 173 (333)
.+..+.|.|.|.
T Consensus 86 ~g~~v~l~v~R~ 97 (106)
T 3axa_A 86 TSSVVTLEVAKQ 97 (106)
T ss_dssp CCSEEEEEEECC
T ss_pred CCCeEEEEEEeC
Confidence 888899999884
No 180
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.66 E-value=3.7e-08 Score=80.53 Aligned_cols=59 Identities=19% Similarity=0.319 Sum_probs=54.8
Q ss_pred eEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEecc
Q psy9829 221 KIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRRE 282 (333)
Q Consensus 221 ~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~ 282 (333)
+++|.+|.++ ++|++.|+|++||+|++|||+++.+.+++++.++|+.+.+.+.|+|.+.
T Consensus 51 ~~~V~~V~~g---spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~v~l~v~~~ 109 (114)
T 2gzv_A 51 CLYIVQVFDN---TPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 109 (114)
T ss_dssp CEEEEEECTT---SHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEECC
T ss_pred CEEEEEECCC---ChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEec
Confidence 6999999999 8998888899999999999999999999999999999888899998654
No 181
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.66 E-value=1.5e-08 Score=80.84 Aligned_cols=56 Identities=27% Similarity=0.375 Sum_probs=51.6
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEE
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTI 279 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V 279 (333)
.+++|.+|.++ ++|++.| |++||+|++|||+.+.+++++|+.++|+.+.+.+.|+|
T Consensus 48 ~~~~V~~V~~~---spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v 103 (104)
T 2z17_A 48 MFTLICKIQED---SPAHCAG-LQAGDVLANINGVSTEGFTYKQVVDLIRSSGNLLTIET 103 (104)
T ss_dssp CCEEEEEECTT---SHHHHHT-CCTTCBCCEETTEECTTCCHHHHHHHHHHTTTEEEEEC
T ss_pred CCeEEEEECCC---ChHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEE
Confidence 47999999999 8888877 99999999999999999999999999999988888875
No 182
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.65 E-value=3.7e-08 Score=81.78 Aligned_cols=60 Identities=25% Similarity=0.345 Sum_probs=54.4
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHh--cCCceEEEEeccC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDS--SKEKLSLTIRREV 283 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~--s~~~v~L~V~R~~ 283 (333)
.+++|.+|.++ ++|++.| |++||+|++|||+.+.+++++++..+|+. ..+.+.|+|.|+.
T Consensus 51 ~gv~V~~V~~g---spA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 112 (124)
T 3tsv_A 51 VGIFVAGVLED---SPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKK 112 (124)
T ss_dssp SCEEEEEECTT---CHHHHTT-CCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEEEEEEECH
T ss_pred CCEEEEEECCC---CHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEECC
Confidence 47999999999 8888877 99999999999999999999999998884 6678999998864
No 183
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.64 E-value=3e-08 Score=77.97 Aligned_cols=59 Identities=17% Similarity=0.290 Sum_probs=52.4
Q ss_pred eEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCc-eEEEEeccC
Q psy9829 221 KIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEK-LSLTIRREV 283 (333)
Q Consensus 221 ~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~-v~L~V~R~~ 283 (333)
+++|.+|.++ ++|++.| |++||+|++|||+.+.+++++++.++|+.+... +.|+|.|+.
T Consensus 34 g~~V~~V~~~---spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R~g 93 (98)
T 2jxo_A 34 GQFIRSVDPD---SPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRET 93 (98)
T ss_dssp CEEEEEECTT---SHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEECCHHH
T ss_pred CEEEEEECCC---CHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEECCc
Confidence 7999999999 8888877 999999999999999999999999999998654 558888763
No 184
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.64 E-value=5.8e-08 Score=78.98 Aligned_cols=63 Identities=21% Similarity=0.265 Sum_probs=56.7
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPRP 286 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~~ 286 (333)
.++||.+|.++ ++|++.| |++||+|++|||+.+.++++.++..+++...+.+.|+|.|+....
T Consensus 42 ~gv~V~~V~~~---spA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~r~~~~~ 104 (117)
T 1uit_A 42 GGIYVSKVTVG---SIAHQAG-LEYGDQLLEFNGINLRSATEQQARLIIGQQCDTITILAQYNPHVH 104 (117)
T ss_dssp SCEEEEEECTT---SHHHHHT-CCTTCEECEETTEETTTCCHHHHHHHTTSCCSEEEEEECCCSCCC
T ss_pred CCEEEEEECCC---CHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCchh
Confidence 47999999999 8888877 999999999999999999999999888888899999999976543
No 185
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=98.63 E-value=1.3e-08 Score=101.72 Aligned_cols=149 Identities=17% Similarity=0.193 Sum_probs=43.7
Q ss_pred CCceEeEecCCCCcccccCCCCCCCCccccccCCEE-EEceeeccCcchhhhhhhh--cCCceEEEEEEeeccCCCCCCC
Q psy9829 107 DPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDVF-HVIDTLHNGVVGSWQVFRI--AHNCISAQIKRTHFNYDQPEKG 183 (333)
Q Consensus 107 D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~I-~Vnd~dv~gv~~a~~alr~--~g~~v~L~v~R~~~~~~~p~~~ 183 (333)
+.+++|++|.+||. |+. .+|++||+| .+|+..+++......+++. .+..++|.|.|......-.-.
T Consensus 285 ~~G~~V~~V~~gsp---------A~~-AGL~~GDvI~~inG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~- 353 (448)
T 1ky9_A 285 QRGAFVSQVLPNSS---------AAK-AGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLE- 353 (448)
T ss_dssp CCSEECCCCTTCSS---------STT-TTCCTTCEECBSSSSBCCSSHHHHHHTTSSBTTCCCEEEEESSSCEEECCCC-
T ss_pred CCceEEEEeccCCH---------HHH-cCCCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEE-
Confidence 46999999999764 444 358999995 8999998887544455543 467799999773211000000
Q ss_pred CCCCCCCceeEEeeecCCCccccccceeecccccc-----cCeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCC
Q psy9829 184 EMSFRKGDVFHVIDTLHNGVVGSWQVFRIDFGIIL-----GNKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDG 258 (333)
Q Consensus 184 ~l~~~~g~~~hv~~sl~~~~lG~~~~~~~d~G~~l-----~~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~ 258 (333)
+...... ... .......-+|+.+ ..+++|.+|.++ ++|++.| |++||+|++|||+.+.
T Consensus 354 -~~~~~~~--~~~---------~~~~~~~~~G~~l~~~~~~~gv~V~~V~~g---spA~~aG-L~~GDiI~~vng~~v~- 416 (448)
T 1ky9_A 354 -LQQSSQN--QVD---------SSSIFNGIEGAEMSNKGKDQGVVVNNVKTG---TPAAQIG-LKKGDVIIGANQQAVK- 416 (448)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -EecCCCc--ccc---------cccccccccceEeeccCCCCeEEEEEecCC---CHHHHcC-CCCCCEEEEECCEECC-
Confidence 0000000 000 0000001123322 247899999999 7777665 9999999999998876
Q ss_pred CCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 259 MSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 259 ~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
+++|..++|+...+.+.|.|.|+..
T Consensus 417 -~~~~l~~~l~~~~~~v~l~v~R~g~ 441 (448)
T 1ky9_A 417 -NIAELRKVLDSKPSVLALNIQRGDS 441 (448)
T ss_dssp --------------------------
T ss_pred -CHHHHHHHHHcCCCeEEEEEEECCE
Confidence 5788889998877789999998754
No 186
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.63 E-value=5.1e-08 Score=77.37 Aligned_cols=59 Identities=22% Similarity=0.362 Sum_probs=53.5
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhc-CCceEEEEecc
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS-KEKLSLTIRRE 282 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s-~~~v~L~V~R~ 282 (333)
.++||.+|.++ ++|++.| |++||+|++|||+++.+++++++..+|+.. .+.+.|+|.|.
T Consensus 45 ~gv~V~~V~~~---spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~ 104 (104)
T 3sfj_A 45 KGIYVTRVSEG---GPAEIAG-LQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVVRLLVTRQ 104 (104)
T ss_dssp CSEEEEEECTT---SHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHTCTTCSEEEEEEEEC
T ss_pred CCEEEEEECCC---ChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEEEEEEcC
Confidence 57999999999 8888887 999999999999999999999999999864 46899999874
No 187
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=98.63 E-value=3e-08 Score=77.71 Aligned_cols=77 Identities=17% Similarity=0.116 Sum_probs=60.7
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCc--chhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGV--VGSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv--~~a~~alr~~g 163 (333)
+.+|||.+.||.+.+. +.+.+++|++|.|||.| +..++|++||+ +.+|+..+.+. .....+++..+
T Consensus 13 ~~~lG~~i~~~~~~~~--~~~~~~~V~~V~~~spA---------~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g 81 (97)
T 2jil_A 13 GNTFGFVIRGGAHDDR--NKSRPVVITSVRPGGPA---------DREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCG 81 (97)
T ss_dssp TTBCSEEEEEECCSCC----CEEEEEEEECTTSHH---------HHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSC
T ss_pred CCccCEEEeCcccCCC--CCCCCEEEEEECCCCHH---------HHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 5699999999999875 35789999999997754 44333799999 68999999994 35566777778
Q ss_pred CceEEEEEEee
Q psy9829 164 NCISAQIKRTH 174 (333)
Q Consensus 164 ~~v~L~v~R~~ 174 (333)
..+.|.|.|..
T Consensus 82 ~~v~l~v~R~~ 92 (97)
T 2jil_A 82 QEAALLIEYDV 92 (97)
T ss_dssp SEEEEEEEEEC
T ss_pred CeEEEEEEeCC
Confidence 88999998843
No 188
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.63 E-value=3.1e-08 Score=78.97 Aligned_cols=61 Identities=26% Similarity=0.442 Sum_probs=55.5
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
.+++|.+|.++ ++|++.| |++||+|++|||+.+.+++++++.++|+...+.+.|+|.|+..
T Consensus 29 ~~~~V~~V~~~---spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~g~ 89 (103)
T 1v5l_A 29 QPLVITRITPG---SKAAAAN-LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAET 89 (103)
T ss_dssp EEEECSCBCTT---STTGGGT-CCTTCBEEEETTEECSSCCHHHHHHHHTTCCSEEECEECCCTT
T ss_pred CCeEEEEECCC---CHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEECCe
Confidence 36899999999 7777754 9999999999999999999999999999998899999999764
No 189
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.63 E-value=3.9e-08 Score=78.77 Aligned_cols=76 Identities=12% Similarity=0.099 Sum_probs=61.4
Q ss_pred cceeeEEEe-----cccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhh
Q psy9829 87 GSTFVGSVL-----GARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQV 158 (333)
Q Consensus 87 G~~~g~~i~-----gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~a 158 (333)
+.+|||.|. ||.+.+. .+.++||++|.+||. |+..++|++||+ +.||+..+.+.+ .++.+
T Consensus 19 ~~~lG~~i~~~~~~gg~~~~~---~~~gv~V~~V~~~sp---------A~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~ 86 (108)
T 1q7x_A 19 DNSLGISVTVLFDKGGVNTSV---RHGGIYVKAVIPQGA---------AESDGRIHKGDRVLAVNGVSLEGATHKQAVET 86 (108)
T ss_dssp SCSCCEEESSSSSSBCBCTTS---SSCCCBEEEECTTST---------HHHHTCCCSSCEEEEETTEECBSCTTSHHHHH
T ss_pred CCCccEEEEEeccCCCccccC---CCCCEEEEEECCCCh---------HHHCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 569999999 9999875 578999999999765 444334799999 589999999764 55667
Q ss_pred hhhcCCceEEEEEEee
Q psy9829 159 FRIAHNCISAQIKRTH 174 (333)
Q Consensus 159 lr~~g~~v~L~v~R~~ 174 (333)
++..+..+.|.|.|..
T Consensus 87 ~~~~g~~v~l~v~R~~ 102 (108)
T 1q7x_A 87 LRNTGQVVHLLLEKGQ 102 (108)
T ss_dssp HHHTTSEEEEEEECCC
T ss_pred HHcCCCeEEEEEEeCC
Confidence 7778889999998843
No 190
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.63 E-value=1.2e-07 Score=75.65 Aligned_cols=61 Identities=23% Similarity=0.282 Sum_probs=55.3
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~ 285 (333)
.+++|.+|.++ ++|+ +.|++||+|++|||+++.++++.++...++...+.+.|+|.|+...
T Consensus 39 ~gv~V~~V~~~---spA~--agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~ 99 (107)
T 2h2b_A 39 TSIVISDVLKG---GPAE--GQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKKGG 99 (107)
T ss_dssp CCEEEEEECTT---STTB--TTBCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEESCC
T ss_pred CCEEEEEECCC---Cchh--hCCCCCCEEEEECCEECCCccHHHHHHHhhCCCCEEEEEEEECCCC
Confidence 47999999999 7776 6899999999999999999999999999998889999999997643
No 191
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.62 E-value=3.6e-08 Score=78.92 Aligned_cols=78 Identities=21% Similarity=0.110 Sum_probs=62.6
Q ss_pred ccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhc
Q psy9829 86 VGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIA 162 (333)
Q Consensus 86 ~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~ 162 (333)
...+|||.+.|+.+.++.+ .+.+++|++|.|||.| +..++|++||+ +.||+..+.+.+ ..+.+++..
T Consensus 23 ~~~~lG~~~~~~~~~~~~~-~~~gv~V~~V~~~spA---------~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 92 (108)
T 2jre_A 23 DTSSLGISISGMRDQSTTG-EATGIYVKSLIPGSAA---------ALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLRNA 92 (108)
T ss_dssp TTSCCSEEEECCCCCSCSS-CCCCCEEEEECTTSHH---------HHHSSCCSSEEEEEETTEECTTSCHHHHHHHHHHH
T ss_pred CCCCcCEEEEcccCCCCCC-CCCCEEEEEeCCCCHH---------HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 3569999999999998874 6789999999997754 43333799999 589999999863 455666767
Q ss_pred CCceEEEEEEe
Q psy9829 163 HNCISAQIKRT 173 (333)
Q Consensus 163 g~~v~L~v~R~ 173 (333)
+..+.|.|.|.
T Consensus 93 g~~v~l~v~R~ 103 (108)
T 2jre_A 93 GNPVRLLLIRR 103 (108)
T ss_dssp CSEEEEEEEEC
T ss_pred CCeEEEEEEeC
Confidence 88899999884
No 192
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=98.62 E-value=5.4e-08 Score=82.38 Aligned_cols=63 Identities=21% Similarity=0.326 Sum_probs=55.2
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhc-CCceEEEEeccCCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS-KEKLSLTIRREVPRP 286 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s-~~~v~L~V~R~~~~~ 286 (333)
.+++|.+|.++ ++|++.| |++||+|++|||+.+.+++++++..+|+.. .+.+.|+|.|+....
T Consensus 64 ~gv~V~~V~~~---spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~g~~~ 127 (139)
T 2vz5_A 64 KGIYVTRVSEG---GPAEIAG-LQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVVRLLVTRQSLQK 127 (139)
T ss_dssp CCEEEEEECTT---SHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHCCTTCSEEEEEEEECC---
T ss_pred CCEEEEEECCC---CHHHHCC-CCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCEEEEEEEECCEEE
Confidence 58999999999 8888887 999999999999999999999999999984 468999999986543
No 193
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.61 E-value=4.5e-08 Score=78.68 Aligned_cols=75 Identities=12% Similarity=0.054 Sum_probs=59.6
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
..||||.+.||.+.+. ++.+++|++|.|||.| +..++|++||+ +.||+..+.+.+ .+..+++..+
T Consensus 18 ~~glG~~l~~g~~~~~---~~~gv~V~~V~~~spA---------~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 85 (110)
T 1um1_A 18 PSGLGMGLIDGMHTHL---GAPGLYIQTLLPGSPA---------AADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHGG 85 (110)
T ss_dssp TTCCCEEEEETTTSTT---CCSSEEEEEECTTSHH---------HHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTCC
T ss_pred CCccCEEEeCCcCCCC---CCCCEEEEEECCCChH---------HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 4699999999998776 5789999999997754 44333799999 589999998864 4445666678
Q ss_pred CceEEEEEEe
Q psy9829 164 NCISAQIKRT 173 (333)
Q Consensus 164 ~~v~L~v~R~ 173 (333)
..+.|.|.|.
T Consensus 86 ~~v~l~v~R~ 95 (110)
T 1um1_A 86 KKMRFLVAKS 95 (110)
T ss_dssp SEEEEEEECC
T ss_pred CeEEEEEEeC
Confidence 8899999884
No 194
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=98.61 E-value=5.3e-08 Score=76.15 Aligned_cols=75 Identities=12% Similarity=0.089 Sum_probs=59.3
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
+.+|||.+.||.+.+. .+.+++|++|.+||.| +..++|++||+ +.||+.++.+.+ ....+++..+
T Consensus 15 ~~~lG~~i~~g~~~~~---~~~g~~V~~V~~~spA---------~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g 82 (96)
T 1d5g_A 15 DNSLGISVTGGVNTSV---RHGGIYVKAVIPQGAA---------ESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTG 82 (96)
T ss_dssp SSSCCEEEECCSSSCS---SSSCCEEEEECTTSHH---------HHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHSCC
T ss_pred CCCCCEEEECCCCCCC---CcCCEEEEEeCCCChH---------HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 4699999999988765 4689999999998755 33333799999 589999999774 4455666678
Q ss_pred CceEEEEEEe
Q psy9829 164 NCISAQIKRT 173 (333)
Q Consensus 164 ~~v~L~v~R~ 173 (333)
..+.|.|.|.
T Consensus 83 ~~v~l~v~R~ 92 (96)
T 1d5g_A 83 QVVHLLLEKG 92 (96)
T ss_dssp SEEEEEEECC
T ss_pred CeEEEEEEcC
Confidence 8899999773
No 195
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.60 E-value=5.4e-08 Score=78.22 Aligned_cols=77 Identities=17% Similarity=0.148 Sum_probs=61.7
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
..||||.|.||++.+++.+.+.+++|++|.|||.| +.. +|++||+ +.||++.+++.. ....+++..+
T Consensus 25 ~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA---------~~a-GL~~GD~I~~ing~~v~~~~~~~~~~~~~~~g 94 (110)
T 1x5q_A 25 TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPA---------ARA-GVRVGDKLLEVNGVALQGAEHHEAVEALRGAG 94 (110)
T ss_dssp SSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHH---------HHH-TCCTTCEEEEETTEECTTCCHHHHHHHHHSCC
T ss_pred CCeeeEEEEccccCCccccCCCCEEEEEECCCCHH---------HHc-CCCCCCEEEEECCEECCCcCHHHHHHHhhCCC
Confidence 56999999999998877667899999999997754 433 3799999 589999999875 3334445578
Q ss_pred CceEEEEEEe
Q psy9829 164 NCISAQIKRT 173 (333)
Q Consensus 164 ~~v~L~v~R~ 173 (333)
..++|.|.|.
T Consensus 95 ~~v~l~v~R~ 104 (110)
T 1x5q_A 95 TAVQMRVWRE 104 (110)
T ss_dssp SEEEEEEEEC
T ss_pred CeEEEEEEEC
Confidence 8899999883
No 196
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.60 E-value=9e-08 Score=78.13 Aligned_cols=62 Identities=16% Similarity=0.186 Sum_probs=54.1
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCc-eEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEK-LSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~-v~L~V~R~~~~ 285 (333)
.+++|.+|.++ ++|++-| |++||+|++|||+++.+++++|+.++|+.+.+. +.|+|.|....
T Consensus 44 ~~v~V~~V~~g---spA~~AG-L~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~~~v~l~V~~~~~~ 106 (109)
T 2vsv_A 44 APVQVHFLDPY---CSASVAG-AREGDYIVSIQLVDCKWLTLSEVMKLLKSFGEDEIEMKVVSLLDE 106 (109)
T ss_dssp SSCEEEEECTT---SHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTTSCEEEEEESCC--
T ss_pred CCeEEEEECCC---CHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEECCCc
Confidence 46899999999 7777765 999999999999999999999999999998886 99999887643
No 197
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.01 E-value=5.9e-09 Score=85.23 Aligned_cols=58 Identities=17% Similarity=0.295 Sum_probs=53.5
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEe
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIR 280 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~ 280 (333)
.++||++|.++ ++|++++.|++||+|++|||+++.+++++++..+|+.+.+.+.|+|.
T Consensus 53 ~gv~V~~V~~~---spA~~~aGL~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~v~l~V~ 110 (112)
T 2lob_A 53 VPILISEIHPG---QPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIEFEVV 110 (112)
Confidence 36999999999 99988788999999999999999999999999999998888888874
No 198
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.58 E-value=7.5e-08 Score=79.15 Aligned_cols=60 Identities=22% Similarity=0.410 Sum_probs=53.4
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~ 285 (333)
.+++|.+|.++ ++|++.| |++||+|++|||+.+.+++++++.++|+.. .+.|+|.|....
T Consensus 44 ~gv~V~~V~~~---spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~--~v~l~v~R~p~~ 103 (114)
T 2d8i_A 44 RRLYVNSVKET---GLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQP--SLGLLVRTYPEL 103 (114)
T ss_dssp EEEEEEECCTT---SSHHHHT-CCTTCCEEEESSCBGGGCCHHHHHHHHTSS--EEEEEEEECCCS
T ss_pred CCEEEEEeCCC---CHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhCC--cEEEEEEECCCC
Confidence 47999999999 8888877 999999999999999999999999999864 899999886543
No 199
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=98.58 E-value=4.8e-08 Score=78.90 Aligned_cols=76 Identities=16% Similarity=0.073 Sum_probs=59.7
Q ss_pred cceeeEEEec---ccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhh
Q psy9829 87 GSTFVGSVLG---ARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFR 160 (333)
Q Consensus 87 G~~~g~~i~g---g~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr 160 (333)
..||||++.| |.+.+. .+.++||++|.|||.| +..++|++||+ +.||+.++.+++ .++.+++
T Consensus 14 ~~glG~~l~~~~~~~~~~~---~~~g~~V~~V~~~s~A---------~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~ 81 (113)
T 2g5m_B 14 SEGLGISIIGMGAGADMGL---EKLGIFVKTVTEGGAA---------HRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLR 81 (113)
T ss_dssp SSCCCCEEEEEECCCCSSS---CCEEEEEEECCTTSHH---------HHHTCSCTTCBEEEETTEECSSCCHHHHHHHHH
T ss_pred CCCCCEEEEecCCCCcCCC---CCCCEEEEEECCCCHH---------HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 4699999999 555442 5789999999997754 44444799999 689999999875 4456777
Q ss_pred hcCCceEEEEEEee
Q psy9829 161 IAHNCISAQIKRTH 174 (333)
Q Consensus 161 ~~g~~v~L~v~R~~ 174 (333)
..+..+.|.|.|..
T Consensus 82 ~~g~~v~l~v~R~~ 95 (113)
T 2g5m_B 82 NTKGRVRFMIGRER 95 (113)
T ss_dssp HSCSSCEEEEEECC
T ss_pred cCCCeEEEEEEeCC
Confidence 78889999998854
No 200
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.57 E-value=5.3e-08 Score=77.11 Aligned_cols=62 Identities=24% Similarity=0.295 Sum_probs=53.8
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPRP 286 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~~ 286 (333)
.+++|.+|.++ ++|++.| |++||+|++|||+.+.++++.++..+++.. +.+.|+|.|+...+
T Consensus 35 ~g~~V~~V~~~---spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~-~~v~l~v~R~g~~p 96 (101)
T 1uez_A 35 VGIYVSLVEPG---SLAEKEG-LRVGDQILRVNDKSLARVTHAEAVKALKGS-KKLVLSVYSAGRIS 96 (101)
T ss_dssp CCEEEEEECTT---SHHHHHT-CCSSCCEEEETTEECSSCCHHHHHHHSSSS-SSCCEEECCCCCCS
T ss_pred CCEEEEEECCC---CHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHhhcCC-CeEEEEEEECCccC
Confidence 47999999999 8888777 999999999999999999998888887664 58999999886544
No 201
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.57 E-value=5.1e-08 Score=78.97 Aligned_cols=74 Identities=15% Similarity=0.136 Sum_probs=58.3
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
+.||||.|.||.+.++ +++|||++|.+||+| +..++|++||+ +.||++++.+++ .+++.|+.+.
T Consensus 24 ~~glG~~i~gg~~~~~----~~~~~V~~v~~~s~A---------~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~ 90 (109)
T 1wi4_A 24 ETGLGLKILGGINRNE----GPLVYIHEVIPGGDC---------YKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAK 90 (109)
T ss_dssp SSCCCEEEEECSSSSS----CSSEEEEEECTTSHH---------HHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSC
T ss_pred CCccCEEEEeccCCCC----CCCEEEEEeCCCChH---------HHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHccc
Confidence 4799999999998765 458999999997654 54445799999 589999999975 5667777654
Q ss_pred ----CceEEEEEEe
Q psy9829 164 ----NCISAQIKRT 173 (333)
Q Consensus 164 ----~~v~L~v~R~ 173 (333)
..++|.+.|.
T Consensus 91 ~r~~~~~~l~v~R~ 104 (109)
T 1wi4_A 91 LRSESPWEIAFIRS 104 (109)
T ss_dssp CSSSSCEEEEEECC
T ss_pred cCCCceEEEEEEeC
Confidence 5688888773
No 202
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.57 E-value=5.3e-08 Score=80.54 Aligned_cols=79 Identities=16% Similarity=0.100 Sum_probs=64.2
Q ss_pred ccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCc--chhhhhhhhc
Q psy9829 86 VGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGV--VGSWQVFRIA 162 (333)
Q Consensus 86 ~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv--~~a~~alr~~ 162 (333)
...+|||.+.|+.+.+.+. .+.+++|++|.+||.| +..++|++||+ +.||+..+.+. ...+.+|+..
T Consensus 25 ~~~~lG~~i~~~~~~~~~~-~~~gv~V~~V~~~spA---------~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 94 (129)
T 2dmz_A 25 DGQSLGIRIVGYVGTSHTG-EASGIYVKSVIPGSAA---------YHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLRNA 94 (129)
T ss_dssp TTCCCCEEEEEECCCSSSC-CCCEEEEEEECTTSHH---------HHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHHHC
T ss_pred CCCCcCEEEEeecCCcccC-CCCCEEEEEeCCCCHH---------HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 4679999999999999864 6789999999997754 43333799999 68999999995 3566777778
Q ss_pred CCceEEEEEEee
Q psy9829 163 HNCISAQIKRTH 174 (333)
Q Consensus 163 g~~v~L~v~R~~ 174 (333)
+..+.|.|.|..
T Consensus 95 ~~~v~l~v~R~~ 106 (129)
T 2dmz_A 95 GQVVHLTLVRRK 106 (129)
T ss_dssp CSSEEEEEEEES
T ss_pred CCeEEEEEEeCC
Confidence 888999998854
No 203
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.56 E-value=2.2e-08 Score=80.76 Aligned_cols=78 Identities=14% Similarity=0.049 Sum_probs=60.7
Q ss_pred ccceeeEEEecccC----CCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhh
Q psy9829 86 VGSTFVGSVLGARG----ALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQV 158 (333)
Q Consensus 86 ~G~~~g~~i~gg~d----~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~a 158 (333)
.+.+|||.|.||.+ +|+. +.+.++||++|.+||.| +..++|++||+ +.||+.++.+++ .++.+
T Consensus 19 ~~~~lG~~i~gg~~~~~~~~~~-~~~~gv~V~~V~~~spA---------~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~ 88 (111)
T 1uju_A 19 PGERLGISIRGGARGHAGNPRD-PTDEGIFISKVSPTGAA---------GRDGRLRVGLRLLEVNQQSLLGLTHGEAVQL 88 (111)
T ss_dssp TTCCCCEEEECCSSSSCSCSSC-TTCCCCEEEEECTTSHH---------HHHSSCCTTCBCCBBSSCBCTTSCHHHHHHH
T ss_pred CCCccCEEEECCcccccccccc-CCCCCEEEEEECCCCHH---------HHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 35799999999995 4544 46889999999997754 44334799999 589999999764 45566
Q ss_pred hhhcCCceEEEEEEe
Q psy9829 159 FRIAHNCISAQIKRT 173 (333)
Q Consensus 159 lr~~g~~v~L~v~R~ 173 (333)
++..+..++|.|.|.
T Consensus 89 l~~~g~~v~l~v~r~ 103 (111)
T 1uju_A 89 LRSVGDTLTVLVCDG 103 (111)
T ss_dssp HSSCSSEEEECCCCC
T ss_pred HHcCCCeEEEEEEEC
Confidence 677788899999874
No 204
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=98.55 E-value=5.4e-08 Score=75.38 Aligned_cols=74 Identities=12% Similarity=0.038 Sum_probs=57.7
Q ss_pred ccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhc
Q psy9829 86 VGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIA 162 (333)
Q Consensus 86 ~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~ 162 (333)
.+.+|||.+.||.+. +.+++|++|.|||.| +...+|++||+ +.||+.++.+.+ .++.+++..
T Consensus 14 ~~~~lG~~i~~~~~~------~~g~~V~~V~~~spA---------~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 78 (90)
T 1qav_A 14 DAGGLGISIKGGREN------KMPILISKIFKGLAA---------DQTEALFVGDAILSVNGEDLSSATHDEAVQALKKT 78 (90)
T ss_dssp TTTCCCEEEEEEGGG------TEEEEEEEECTTSHH---------HHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred CCCCcCEEEEcccCC------CCCEEEEEECCCCHH---------HhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 357999999998763 368999999997654 43335799999 589999999874 445566777
Q ss_pred CCceEEEEEEee
Q psy9829 163 HNCISAQIKRTH 174 (333)
Q Consensus 163 g~~v~L~v~R~~ 174 (333)
+..++|.|+|.+
T Consensus 79 ~~~v~l~v~r~r 90 (90)
T 1qav_A 79 GKEVVLEVKYMK 90 (90)
T ss_dssp CSEEEEEEEECC
T ss_pred CCeEEEEEEEeC
Confidence 888999998853
No 205
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=98.55 E-value=1.1e-07 Score=79.71 Aligned_cols=78 Identities=15% Similarity=0.084 Sum_probs=60.3
Q ss_pred ccceeeEEEecccCCCCC------CCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhh
Q psy9829 86 VGSTFVGSVLGARGALDL------ANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSW 156 (333)
Q Consensus 86 ~G~~~g~~i~gg~d~p~~------~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~ 156 (333)
...||||+|.||.+.+.. ...+.++||++|.|||.| +..+ |++||+ +.||++++.+++ .++
T Consensus 37 ~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA---------~~aG-L~~GD~Il~Vng~~v~~~~~~~~~ 106 (132)
T 3l4f_D 37 DSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVA---------WRAG-LRMGDFLIEVNGQNVVKVGHRQVV 106 (132)
T ss_dssp TTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGG---------GGGT-CCTTCEEEEESSSBCTTSCHHHHH
T ss_pred CCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHH---------HHcC-CCCCCEEEEECCEECCCCCHHHHH
Confidence 356999999999985432 123469999999997754 4433 799999 689999999875 556
Q ss_pred hhhhhcCCceEEEEEEe
Q psy9829 157 QVFRIAHNCISAQIKRT 173 (333)
Q Consensus 157 ~alr~~g~~v~L~v~R~ 173 (333)
.+++..+..+.|.|.|.
T Consensus 107 ~~l~~~g~~v~l~v~~~ 123 (132)
T 3l4f_D 107 NMIRQGGNTLMVKVVMV 123 (132)
T ss_dssp HHHHHTTTEEEEEEECC
T ss_pred HHHHcCCCEEEEEEEEC
Confidence 67788888999999774
No 206
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.55 E-value=2.1e-07 Score=71.74 Aligned_cols=58 Identities=16% Similarity=0.367 Sum_probs=49.4
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHh--cCCceEEEEeccC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDS--SKEKLSLTIRREV 283 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~--s~~~v~L~V~R~~ 283 (333)
.+++|..+ ++ ++|+ +.|++||+|++|||+.+.+++++++..+|+. ..+.+.|+|.|+.
T Consensus 27 ~~~~v~~v-~~---spA~--aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g 86 (88)
T 3bpu_A 27 GGQRVKQI-VD---SPRS--RGLKEGDLIVEVNKKNVQALTHNQVVDMLVESPKGSEVTLLVQRQT 86 (88)
T ss_dssp SSEEEEEC-CC-----CC--TTCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEEEC
T ss_pred CcEEEEEe-cC---ChhH--hCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCCEEEEEEEeCC
Confidence 46899997 88 7776 5899999999999999999999999999986 4678999998875
No 207
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.55 E-value=1.2e-07 Score=83.65 Aligned_cols=63 Identities=22% Similarity=0.297 Sum_probs=58.3
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~ 285 (333)
.++||.+|.++ ++|++.+.|++||+|++|||+.+.+++|.++..+++.+.+.+.|+|.|+.++
T Consensus 33 ~~~~V~~v~~~---spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~ 95 (200)
T 2qt5_A 33 GKPRVSNLRQG---GIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKNVGERVVLEVEYELPP 95 (200)
T ss_dssp SCSEEEEECTT---SHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHHTCCSEEEEEEEEECCC
T ss_pred CCeEEEEECCC---ChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEeccCCC
Confidence 46899999999 8888887899999999999999999999999999999999999999998654
No 208
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=98.52 E-value=1.2e-07 Score=74.11 Aligned_cols=72 Identities=10% Similarity=0.037 Sum_probs=56.2
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
+.+|||.+.++.+ +++++|++|.|||. |+..+.|++||+ +.||+.++.+.+ .+..+++..+
T Consensus 15 ~~~lG~~~~~~~~-------~~gv~V~~V~~~sp---------A~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 78 (95)
T 2vwr_A 15 GEQLGIKLVRRTD-------EPGVFILDLLEGGL---------AAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQASG 78 (95)
T ss_dssp TCCCCEEEEECSS-------SCSEEEEEECTTSH---------HHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred CCcccEEEEeccC-------CCCEEEEEeCCCCh---------HHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 4689999998765 46899999999775 444334799999 689999998875 3455666678
Q ss_pred CceEEEEEEee
Q psy9829 164 NCISAQIKRTH 174 (333)
Q Consensus 164 ~~v~L~v~R~~ 174 (333)
..+.|.|.|..
T Consensus 79 ~~v~l~v~R~~ 89 (95)
T 2vwr_A 79 ERVNLTIARPG 89 (95)
T ss_dssp SEEEEEEEEES
T ss_pred CEEEEEEEcCC
Confidence 89999998843
No 209
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.51 E-value=1.7e-07 Score=82.64 Aligned_cols=63 Identities=24% Similarity=0.375 Sum_probs=57.8
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhc--CCceEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS--KEKLSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s--~~~v~L~V~R~~~~ 285 (333)
.++||.+|.++ ++|++.|+|++||+|++|||+.+.++++.++..+|+.. .+.+.|+|.|+...
T Consensus 36 ~~~~V~~v~~~---spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~ 100 (196)
T 1p1d_A 36 SPPLISYIEAD---SPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEFDVAE 100 (196)
T ss_dssp CSEEEEECCTT---SHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTCCSSSEEEEEEEECSCS
T ss_pred CCEEEEEECCC---CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEecCCC
Confidence 36999999999 89988888999999999999999999999999999988 57899999998754
No 210
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.50 E-value=2e-07 Score=75.31 Aligned_cols=58 Identities=28% Similarity=0.385 Sum_probs=52.6
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEecc
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRRE 282 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~ 282 (333)
.+++|.+|.++ ++|++.| |++||+|++|||+.+.++++.++..+++.. +.+.|+|.|+
T Consensus 41 ~gv~V~~V~~~---s~A~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~-~~v~l~v~r~ 98 (114)
T 1x5n_A 41 PGIFISHVKPG---SLSAEVG-LEIGDQIVEVNGVDFSNLDHKEAVNVLKSS-RSLTISIVAA 98 (114)
T ss_dssp CSEEEEEECTT---STTTTTT-CCTTCEEEEETTEETTSCCTTHHHHHHHHC-SSEEEEECSS
T ss_pred CCEEEEEECCC---CHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC-CeEEEEEEcC
Confidence 47999999999 8887776 999999999999999999999999999876 6899999887
No 211
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.50 E-value=2.1e-07 Score=74.85 Aligned_cols=63 Identities=17% Similarity=0.319 Sum_probs=55.9
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhc-CCceEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS-KEKLSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s-~~~v~L~V~R~~~~ 285 (333)
.+++|.++.++ ++|++.|-|++||+|++|||+.+.+++++++.++|+.. .+.+.|+|.|+...
T Consensus 26 ~~~~V~~v~~~---spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~g~~ 89 (112)
T 1qau_A 26 PPVIISDLIRG---GAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRGPEG 89 (112)
T ss_dssp SCEEEEEECTT---SHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHHSCSSSEEEEEEECCTT
T ss_pred CCEEEEEeCCC---ChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCcEEEEEEeCCcc
Confidence 37999999999 88888775699999999999999999999999999985 47899999997643
No 212
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.50 E-value=2.5e-07 Score=73.64 Aligned_cols=74 Identities=14% Similarity=0.089 Sum_probs=57.5
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhc-
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIA- 162 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~- 162 (333)
..||||.+.||.+. +.+++|++|.||| ||+..++|++||+ +.||++++.+.+ ..+.+|+.+
T Consensus 19 ~~g~G~~i~~g~~~------~~~~~V~~V~~~s---------pA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~ 83 (103)
T 1uep_A 19 ESGFGFRILGGDEP------GQPILIGAVIAMG---------SADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAA 83 (103)
T ss_dssp SSSCCEEECCCCST------TSCCBEEEECTTS---------TTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHH
T ss_pred CCccCEEEeeecCC------CCCeEEEEeCCCC---------hHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 56899999998742 4679999999976 4554444799999 589999998864 455667765
Q ss_pred -CCceEEEEEEeec
Q psy9829 163 -HNCISAQIKRTHF 175 (333)
Q Consensus 163 -g~~v~L~v~R~~~ 175 (333)
+..++|.|.|...
T Consensus 84 ~g~~v~l~v~R~~~ 97 (103)
T 1uep_A 84 RNGQVNLTVRRKVL 97 (103)
T ss_dssp HHTEEEEEEEEECC
T ss_pred CCCcEEEEEEeCCC
Confidence 7889999998653
No 213
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.49 E-value=4.4e-08 Score=79.57 Aligned_cols=75 Identities=13% Similarity=0.130 Sum_probs=59.3
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeecc-Ccc--hhhhhhhhc
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHN-GVV--GSWQVFRIA 162 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~-gv~--~a~~alr~~ 162 (333)
+.+|||.+.||.+.+. .+.++||++|.|||.| +..++|++||+ +.||+..+. +.+ .++.+++..
T Consensus 31 ~~~lG~~i~~~~~~~~---~~~gv~V~~V~~~spA---------~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~~ 98 (117)
T 2o2t_A 31 SGGLGFSVVGLRSENR---GELGIFVQEIQEGSVA---------HRDGRLKETDQILAINGQALDQTITHQQAISILQKA 98 (117)
T ss_dssp SSCSSCCEEEEECCC-----CEEEEECCCCTTSHH---------HHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHHC
T ss_pred CCCCCEEEeecccCCC---CCCCEEEEEECCCCHH---------HHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcC
Confidence 5799999999998764 4789999999997654 54334799999 689999998 664 556677778
Q ss_pred CCceEEEEEEe
Q psy9829 163 HNCISAQIKRT 173 (333)
Q Consensus 163 g~~v~L~v~R~ 173 (333)
+..++|.|.|.
T Consensus 99 ~~~v~l~v~R~ 109 (117)
T 2o2t_A 99 KDTVQLVIARG 109 (117)
T ss_dssp CSEEEEEEESS
T ss_pred CCEEEEEEEeC
Confidence 88999999873
No 214
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.48 E-value=1.6e-07 Score=94.67 Aligned_cols=60 Identities=25% Similarity=0.345 Sum_probs=56.1
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHh--cCCceEEEEeccC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDS--SKEKLSLTIRREV 283 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~--s~~~v~L~V~R~~ 283 (333)
.||||.+|.+| ++|++.| |++||+|++|||+++.+++++|++.+|+. .++.+.|+|.|+.
T Consensus 23 ~Gi~V~~V~~g---spA~~aG-L~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v~L~V~r~g 84 (468)
T 3shw_A 23 VGIFVAGVLED---SPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKK 84 (468)
T ss_dssp TEEEEEEECSS---SHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEECH
T ss_pred CCEEEEEECCC---CHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEECC
Confidence 47999999999 9999887 99999999999999999999999999998 7789999999953
No 215
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.48 E-value=2.2e-07 Score=71.80 Aligned_cols=60 Identities=23% Similarity=0.247 Sum_probs=53.1
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHh--cCCceEEEEeccC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDS--SKEKLSLTIRREV 283 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~--s~~~v~L~V~R~~ 283 (333)
.+++|.+|.++ ++|++.| |++||+|++|||+.+.+.++++...+|+. ..+.+.|+|.|+.
T Consensus 28 ~g~~V~~V~~~---spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g 89 (90)
T 2eaq_A 28 PGIFVASVEAG---SPAEFSQ-LQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGHLVMDVRRYG 89 (90)
T ss_dssp TEEEEEEECTT---SHHHHTT-CCTTCEEEEETTEECCTTCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred CCEEEEEECCC---ChHHHcC-CCCCCEEEEECCEEccCCCHHHHHHHHHhcCCCCEEEEEEEeCC
Confidence 47999999999 8777765 99999999999999988899999999985 4788999998864
No 216
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.47 E-value=1.6e-07 Score=74.49 Aligned_cols=77 Identities=13% Similarity=0.039 Sum_probs=58.6
Q ss_pred cceeeEEEecccCCCC----C--CCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhh
Q psy9829 87 GSTFVGSVLGARGALD----L--ANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQ 157 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~----~--~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~ 157 (333)
..+|||++.||.+..+ | ...+.+++|++|.|||.| +.. +|++||+ +.||+..+++.. ..+.
T Consensus 18 ~~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA---------~~a-Gl~~GD~I~~ing~~v~~~~~~~~~~ 87 (104)
T 3sfj_A 18 NLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPA---------EIA-GLQIGDKIMQVNGWDMTMVTHDQARK 87 (104)
T ss_dssp EEECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHH---------HHH-TCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred CCcccEEEECccccCccccccccCCCCCCEEEEEECCCChH---------HHc-CCCCCCEEEEECCEECCCCCHHHHHH
Confidence 3489999999999742 1 135789999999997754 433 3799999 689999998886 5556
Q ss_pred hhhh-cCCceEEEEEEe
Q psy9829 158 VFRI-AHNCISAQIKRT 173 (333)
Q Consensus 158 alr~-~g~~v~L~v~R~ 173 (333)
+++. .+..+.|.|.|+
T Consensus 88 ~l~~~~g~~v~l~v~R~ 104 (104)
T 3sfj_A 88 RLTKRSEEVVRLLVTRQ 104 (104)
T ss_dssp HHTCTTCSEEEEEEEEC
T ss_pred HHHhCCCCEEEEEEEcC
Confidence 6654 457799999874
No 217
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.47 E-value=2.1e-07 Score=76.85 Aligned_cols=62 Identities=27% Similarity=0.384 Sum_probs=54.8
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPRP 286 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~~ 286 (333)
.+++|.+|.++ ++|++.| |++||+|++|||+.+.++++.++.+.++.. +.+.|+|.|+....
T Consensus 46 ~gv~V~~V~~~---spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~v~l~v~R~g~~~ 107 (128)
T 1uf1_A 46 LGIYITGVDPG---SEAEGSG-LKVGDQILEVNGRSFLNILHDEAVRLLKSS-RHLILTVKDVGRLP 107 (128)
T ss_dssp CCCEEEEECTT---CHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHTTC-SEEEEEEECCSCCS
T ss_pred CCEEEEEECCC---CHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC-CeEEEEEEECCccc
Confidence 37999999999 8887766 999999999999999999999999999885 68999999986543
No 218
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.47 E-value=4.3e-07 Score=73.57 Aligned_cols=79 Identities=13% Similarity=0.066 Sum_probs=61.5
Q ss_pred ccceeeEEEecccCCCCCCCCC--CceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCc--chhhhhhh
Q psy9829 86 VGSTFVGSVLGARGALDLANYD--PSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGV--VGSWQVFR 160 (333)
Q Consensus 86 ~G~~~g~~i~gg~d~p~~~~~D--~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv--~~a~~alr 160 (333)
...+|||.|.|+.+.+..+ .+ ..++|++|.||| ||+...+|++||+ +.||+..+.++ ...+.+|+
T Consensus 20 ~~~~lGf~l~~~~~~~~~g-~~~~~~~~V~~V~~~s---------pA~~~agL~~GD~I~~ing~~v~~~~~~~~~~~l~ 89 (114)
T 1uew_A 20 ENEGFGFVIISSLNRPESG-STITVPHKIGRIIDGS---------PADRCAKLKVGDRILAVNGQSIINMPHADIVKLIK 89 (114)
T ss_dssp TTSCCCEEEECCCCSCCSS-CCSCCSCEEEEECTTC---------TTGGGSSCCTTCBEEEETTBCTTTSCHHHHHHHHH
T ss_pred CCCCCCEEEEeecccCCCC-cccccCeEEEEECCCC---------hHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3569999999999887632 12 267999999976 5555346799999 58999999996 35566777
Q ss_pred hcCCceEEEEEEee
Q psy9829 161 IAHNCISAQIKRTH 174 (333)
Q Consensus 161 ~~g~~v~L~v~R~~ 174 (333)
..+..+.|.|.|..
T Consensus 90 ~~g~~v~l~v~r~~ 103 (114)
T 1uew_A 90 DAGLSVTLRIIPQE 103 (114)
T ss_dssp HTTTEEEEEECCCS
T ss_pred cCCCeEEEEEEeCC
Confidence 78888999998844
No 219
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=98.46 E-value=1.2e-07 Score=75.72 Aligned_cols=73 Identities=10% Similarity=0.003 Sum_probs=58.5
Q ss_pred ccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhc
Q psy9829 86 VGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIA 162 (333)
Q Consensus 86 ~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~ 162 (333)
.+.+|||.+.||.+. +.+++|++|.|||.| +...+|++||+ +.||++++.+.+ .++.+++.+
T Consensus 19 ~~~~lG~~l~~g~~~------~~~~~V~~V~~~s~A---------~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~ 83 (103)
T 2dc2_A 19 DHEGLGISITGGKEH------GVPILISEIHPGQPA---------DRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQ 83 (103)
T ss_dssp SSSCCCEEEEEEGGG------TEEEEEEEECTTSHH---------HHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHHC
T ss_pred CCCccCEEEEeccCC------CCCEEEEEECCCCHH---------HHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 457999999999764 357999999998754 43235799999 589999998875 556778888
Q ss_pred CCceEEEEEEe
Q psy9829 163 HNCISAQIKRT 173 (333)
Q Consensus 163 g~~v~L~v~R~ 173 (333)
++.++|.|.|.
T Consensus 84 ~~~v~l~v~~~ 94 (103)
T 2dc2_A 84 RGEIEFEVVYV 94 (103)
T ss_dssp CSEEEEEEEEC
T ss_pred CCcEEEEEEec
Confidence 88999999874
No 220
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=98.45 E-value=1.8e-07 Score=72.56 Aligned_cols=72 Identities=14% Similarity=0.184 Sum_probs=55.8
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
+.+|||.+.++.+ +.+++|++|.|||. |+..+.|++||+ +.+|+..+.+.. ....+++..+
T Consensus 15 ~~~lG~~~~~~~~-------~~gv~V~~V~~~sp---------A~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 78 (92)
T 2qg1_A 15 GKGLGLSIVGKRN-------DTGVFVSDIVKGGI---------ADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSL 78 (92)
T ss_dssp TSCCSEEEECCSS-------SCSCEEEEECTTSH---------HHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred CCcccEEEEeccC-------CCCEEEEEECCCCH---------HHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 5799999998753 46899999999765 444333799999 689999998874 3445566678
Q ss_pred CceEEEEEEee
Q psy9829 164 NCISAQIKRTH 174 (333)
Q Consensus 164 ~~v~L~v~R~~ 174 (333)
..++|.|.|..
T Consensus 79 ~~v~l~v~R~~ 89 (92)
T 2qg1_A 79 GTVTLEVGRIS 89 (92)
T ss_dssp SEEEEEEECCC
T ss_pred CeEEEEEEccc
Confidence 88999998853
No 221
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.44 E-value=1.3e-07 Score=75.88 Aligned_cols=76 Identities=13% Similarity=0.114 Sum_probs=58.5
Q ss_pred ccccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhh
Q psy9829 84 FPVGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFR 160 (333)
Q Consensus 84 qE~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr 160 (333)
.....||||.|.||.+... +.+||++|.|||+| +..++|++||+ +.||+.++.+++ .++.+|+
T Consensus 13 ~k~~~glG~~i~gg~~~~~-----~~~~I~~v~~~s~A---------~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 78 (103)
T 1ufx_A 13 KKSAATLGIAIEGGANTRQ-----PLPRIVTIQRGGSA---------HNCGQLKVGHVILEVNGLTLRGKEHREAARIIA 78 (103)
T ss_dssp ECCSSSCCEEEECBTTSSC-----SSCEEEEECTTSHH---------HHHCSSCTTCBCCEETTEECTTCBHHHHHHHHH
T ss_pred EcCCCcCCeEEECCCCCCC-----CcEEEEEeCCCChH---------HHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3346799999999988643 67899999997654 54445799999 699999999975 5667777
Q ss_pred hc-----CCceEEEEEEe
Q psy9829 161 IA-----HNCISAQIKRT 173 (333)
Q Consensus 161 ~~-----g~~v~L~v~R~ 173 (333)
.+ +..++++|.|.
T Consensus 79 ~~~~~~~~~~i~l~v~r~ 96 (103)
T 1ufx_A 79 EAFKTKDRDYIDFLVTEF 96 (103)
T ss_dssp HHHHCSSCSEEEEEECCC
T ss_pred HhcccCCCCeEEEEEEEc
Confidence 64 55688888774
No 222
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.44 E-value=2.1e-07 Score=76.58 Aligned_cols=74 Identities=12% Similarity=0.092 Sum_probs=58.3
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
..+|||.+.||.+.+ +.++||++|.|||.| +..++|++||+ +.||+..+.+.+ .++.+++..+
T Consensus 35 ~~glG~~l~~~~~~~-----~~gv~V~~V~~~spA---------~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~ 100 (124)
T 2daz_A 35 KNGLGLSLAGNKDRS-----RMSIFVVGINPEGPA---------AADGRMRIGDELLEINNQILYGRSHQNASAIIKTAP 100 (124)
T ss_dssp SSCCCEEEECBSSTT-----SCCEEEEEECTTSHH---------HHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHSC
T ss_pred CCccCEEEeccCCCC-----cCCEEEEEECCCCHH---------HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 569999999998754 468999999997754 44334799999 589999998875 4455677778
Q ss_pred CceEEEEEEee
Q psy9829 164 NCISAQIKRTH 174 (333)
Q Consensus 164 ~~v~L~v~R~~ 174 (333)
..+.|.|.|..
T Consensus 101 ~~v~l~v~R~~ 111 (124)
T 2daz_A 101 SKVKLVFIRNE 111 (124)
T ss_dssp SEEEEEEEECT
T ss_pred CeEEEEEEeCC
Confidence 88999998843
No 223
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=98.44 E-value=1.1e-07 Score=89.08 Aligned_cols=75 Identities=12% Similarity=0.029 Sum_probs=61.3
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
+.||||.|.||.++ +.+|||++|.+||. |+...+|++||+ +.||++++.+++ .++.+++..+
T Consensus 88 ~~glGf~I~gg~d~------~~gi~V~~V~~gsp---------A~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~~~g 152 (263)
T 1z87_A 88 AGGLGISIKGGREN------KMPILISKIFKGLA---------ADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTG 152 (263)
T ss_dssp TCCCCCEEEEETTT------TEEEEEEECCTTSH---------HHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHHHCC
T ss_pred CCCEeEEEeeccCC------CCCEEEEEECCCCH---------HHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHhcCC
Confidence 57999999999874 46899999999765 454345799999 589999999985 5677888888
Q ss_pred CceEEEEEEeecc
Q psy9829 164 NCISAQIKRTHFN 176 (333)
Q Consensus 164 ~~v~L~v~R~~~~ 176 (333)
..|+|.|+|....
T Consensus 153 ~~V~L~V~R~~~~ 165 (263)
T 1z87_A 153 KEVVLEVKYMKEV 165 (263)
T ss_dssp SCCCEEEECCSSS
T ss_pred CeEEEEEEeCccc
Confidence 8999999996543
No 224
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=98.43 E-value=1.9e-07 Score=72.05 Aligned_cols=73 Identities=16% Similarity=0.105 Sum_probs=55.0
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
..||||.+.||.+. +.+++|++|.|||.| +..++|++||+ +.+|+.++.+.+ ....+++..+
T Consensus 12 ~~g~G~~~~~g~~~------~~~~~V~~V~~~spA---------~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 76 (90)
T 2q9v_A 12 ETGFGFRILGGNEP------GEPIYIGHIVPLGAA---------DTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAA 76 (90)
T ss_dssp TTBCCEEEEECSST------TSCEEEEEECTTSHH---------HHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHH
T ss_pred CCccCEEEEccccC------CCCEEEEEECCCChH---------HHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 46899999998763 234999999997654 44334799999 589999997764 4456677664
Q ss_pred C--ceEEEEEEee
Q psy9829 164 N--CISAQIKRTH 174 (333)
Q Consensus 164 ~--~v~L~v~R~~ 174 (333)
+ .++|.|.|++
T Consensus 77 ~~~~v~l~v~R~~ 89 (90)
T 2q9v_A 77 KQGHVNLTVRQTR 89 (90)
T ss_dssp HHTEEEEEEEECC
T ss_pred CCCeEEEEEEecc
Confidence 3 7999998854
No 225
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.43 E-value=2.6e-07 Score=75.99 Aligned_cols=59 Identities=17% Similarity=0.284 Sum_probs=53.1
Q ss_pred eEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCC-ceEEEEeccC
Q psy9829 221 KIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKE-KLSLTIRREV 283 (333)
Q Consensus 221 ~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~-~v~L~V~R~~ 283 (333)
+++|.+|.++ ++|++.| |++||+|++|||+.+.+++++++..+|+.... .+.|+|.|+.
T Consensus 34 gv~V~~V~~~---spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R~g 93 (128)
T 2kjd_A 34 GQFIRSVDPD---SPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRET 93 (128)
T ss_dssp SEEEEEECTT---SHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEEEEEECHHH
T ss_pred CEEEEEeCCC---ChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEEEEEEeCC
Confidence 7999999999 8888877 99999999999999999999999999998755 5668998864
No 226
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=98.40 E-value=2.5e-07 Score=71.00 Aligned_cols=72 Identities=10% Similarity=0.003 Sum_probs=56.6
Q ss_pred ccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhc
Q psy9829 86 VGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIA 162 (333)
Q Consensus 86 ~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~ 162 (333)
.+.+|||.+.||.+. +.++||++|.|||.| +...+|++||+ +.||+.++.+.+ .++.+++..
T Consensus 12 ~~~~lG~~i~~~~~~------~~~~~V~~V~~gspA---------~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 76 (87)
T 4e34_A 12 DHEGLGISITGGKEH------GVPILISEIHPGQPA---------DRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQ 76 (87)
T ss_dssp TTBCCCEEEEEEGGG------TEEEEEEEECTTSHH---------HHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHHC
T ss_pred CCCcccEEEEccCCC------CCCEEEEEECCCCHH---------HhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 356999999998763 357999999997754 43235799999 689999998874 556677778
Q ss_pred CCceEEEEEE
Q psy9829 163 HNCISAQIKR 172 (333)
Q Consensus 163 g~~v~L~v~R 172 (333)
+..++|.|++
T Consensus 77 ~~~v~l~v~~ 86 (87)
T 4e34_A 77 RGEIEFEVVY 86 (87)
T ss_dssp CSEEEEEEEE
T ss_pred CCeEEEEEEE
Confidence 8889998865
No 227
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.39 E-value=4.8e-07 Score=74.45 Aligned_cols=74 Identities=14% Similarity=0.100 Sum_probs=57.2
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhh--
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRI-- 161 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~-- 161 (333)
..||||.+.||.+ .+.+++|++|.+||.| +..+.|++||+ +.||+.++.+.+ ..+.+|+.
T Consensus 29 ~~glG~~~~~g~~------~~~gv~V~~V~~~spA---------~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 93 (123)
T 1ueq_A 29 NMGFGFTIIGGDE------PDEFLQVKSVIPDGPA---------AQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVP 93 (123)
T ss_dssp TTSCSEEEECCSS------SSCCCEEEEECTTSHH---------HHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSC
T ss_pred CCceeEEEecccC------CCCCEEEEEECCCCHH---------HHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 5699999999865 2567999999997754 43333799999 689999998764 45567776
Q ss_pred cCCceEEEEEEeec
Q psy9829 162 AHNCISAQIKRTHF 175 (333)
Q Consensus 162 ~g~~v~L~v~R~~~ 175 (333)
.+..++|.|.|...
T Consensus 94 ~g~~v~l~v~R~~~ 107 (123)
T 1ueq_A 94 IGQSVNLVLCRGYP 107 (123)
T ss_dssp TTCEEEEEEEESCC
T ss_pred CCCeEEEEEEeCCC
Confidence 46889999998553
No 228
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.39 E-value=3.2e-07 Score=74.79 Aligned_cols=63 Identities=16% Similarity=0.195 Sum_probs=54.6
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCc-eEEEEeccCCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEK-LSLTIRREVPRP 286 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~-v~L~V~R~~~~~ 286 (333)
.+++|.++.++ ++|++-| |++||+|++|||+.+.+++++|+.++|+.+.+. +.|+|.|.....
T Consensus 36 ~~v~V~~V~~~---spA~~aG-L~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~~v~l~V~~~~~~~ 99 (111)
T 1vae_A 36 TPVQVHFLDPH---CSASLAG-AKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEVEMKVVSLLDST 99 (111)
T ss_dssp SSCEECCCCTT---SSHHHHH-CCTTCEEEEETTEECSSCCHHHHHHHHHHTTTSEECEEEECEECCC
T ss_pred CCEEEEEECCC---CHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEEEecCCCc
Confidence 46899999999 7776654 999999999999999999999999999988775 999998875444
No 229
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.38 E-value=5.4e-07 Score=72.04 Aligned_cols=56 Identities=23% Similarity=0.477 Sum_probs=49.2
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEec
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRR 281 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R 281 (333)
.++||.++.++ ++|++-| |++||+|++|||+...++++++..+++++ ..++|+|..
T Consensus 35 ~g~~V~~V~~~---spA~~aG-L~~GD~Il~vng~~v~~~~~~~l~~~l~~--~~l~ltV~~ 90 (94)
T 3kzd_A 35 RRLYVNSVKET---GLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQ--PSLGLLVRT 90 (94)
T ss_dssp CEEEEEEECTT---SHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHS--SEEEEEEEE
T ss_pred CCeEEEEECCC---CHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC--CeEEEEEEe
Confidence 37999999999 8887765 99999999999999999999999999985 568887743
No 230
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.38 E-value=3.2e-07 Score=75.19 Aligned_cols=72 Identities=10% Similarity=0.037 Sum_probs=56.5
Q ss_pred ceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhc--
Q psy9829 88 STFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIA-- 162 (333)
Q Consensus 88 ~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~-- 162 (333)
.||||+|.||.+.+. ..++|++|.+||+ |+..++|++||+ +.||++.+.+++ .++..|+..
T Consensus 28 ~glG~~i~gg~~~~~-----~~i~I~~V~~gsp---------A~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~ 93 (118)
T 1v6b_A 28 GSLDLALEGGVDSPV-----GKVVVSAVYEGGA---------AERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWN 93 (118)
T ss_dssp SCCCCEEEEBTTSSS-----CSEEEEECCTTSH---------HHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHH
T ss_pred CccCEEEEcccCCCC-----CCEEEEEECCCCH---------HHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhh
Confidence 499999999988764 2499999999765 454435799999 689999999875 455666654
Q ss_pred --CCceEEEEEEe
Q psy9829 163 --HNCISAQIKRT 173 (333)
Q Consensus 163 --g~~v~L~v~R~ 173 (333)
+..++|.|.|.
T Consensus 94 ~~g~~v~l~v~r~ 106 (118)
T 1v6b_A 94 QGGDWIDLVVAVC 106 (118)
T ss_dssp HTCSEEEEEEECC
T ss_pred cCCCeEEEEEEeC
Confidence 77899999883
No 231
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=98.37 E-value=4.7e-07 Score=74.48 Aligned_cols=74 Identities=9% Similarity=-0.025 Sum_probs=58.5
Q ss_pred ccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhc
Q psy9829 86 VGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIA 162 (333)
Q Consensus 86 ~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~ 162 (333)
...+|||++.||.+. .+++||++|.+||.| +..++|++||+ +.||+.++.+.+ ..+.+++..
T Consensus 29 ~~~~lG~~i~gg~~~------~~~~~V~~v~~gspA---------~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~ 93 (125)
T 3hpk_A 29 AQNLIGISIGGGAQY------CPCLYIVQVFDNTPA---------ALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 93 (125)
T ss_dssp TTSCCCEEEEECSSC------CSSEEEEEECTTSHH---------HHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHS
T ss_pred CCCCcCEEEeccCCC------CCCEEEEEeCCCCHH---------HHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 356899999998752 368999999997754 44334799999 689999999875 456677888
Q ss_pred CCceEEEEEEee
Q psy9829 163 HNCISAQIKRTH 174 (333)
Q Consensus 163 g~~v~L~v~R~~ 174 (333)
+..++|.|+|..
T Consensus 94 ~~~v~l~v~r~~ 105 (125)
T 3hpk_A 94 KGEVTIHYNKLQ 105 (125)
T ss_dssp CSEEEEEEEEEC
T ss_pred CCeEEEEEEECC
Confidence 888999998844
No 232
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.37 E-value=4.1e-07 Score=89.50 Aligned_cols=60 Identities=25% Similarity=0.345 Sum_probs=55.7
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHh--cCCceEEEEeccC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDS--SKEKLSLTIRREV 283 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~--s~~~v~L~V~R~~ 283 (333)
.++||.+|.+| ++|++.| |++||+|++|||+++.+++++|+..+|+. .++.+.|+|.|+.
T Consensus 31 ~gi~V~~V~~g---spA~~aG-L~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~v~l~v~r~~ 92 (391)
T 3tsz_A 31 VGIFVAGVLED---SPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKK 92 (391)
T ss_dssp TEEEEEEECTT---CHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEECH
T ss_pred CCEEEEEECCC---CHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhhcCCCeEEEEEeeCC
Confidence 47999999999 9999888 99999999999999999999999999996 6778999999864
No 233
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.36 E-value=6.8e-07 Score=73.63 Aligned_cols=61 Identities=26% Similarity=0.400 Sum_probs=54.0
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhc-CCceEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS-KEKLSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s-~~~v~L~V~R~~~~ 285 (333)
.+++|.+|.++ ++|++.|+|++||+|++|||+.+. +++++.++|+.. .+.+.|+|.|+...
T Consensus 48 ~gv~V~~V~~~---spA~~aG~l~~GD~I~~ing~~v~--~~~~~~~~l~~~~g~~v~l~v~R~g~~ 109 (124)
T 1wh1_A 48 IGIYISEIDPN---SIAAKDGRIREGDRIIQINGIEVQ--NREEAVALLTSEENKNFSLLIARPELQ 109 (124)
T ss_dssp CCEEEEEECSS---SHHHHTCCCCTTCEEEEESSCBCC--SHHHHHHHHTCSSCCSCCEEEEECSSC
T ss_pred CCEEEEEECCC---CHHHHcCCCCCCCEEEEECCEECC--CHHHHHHHHHhCCCCEEEEEEEECCEE
Confidence 47999999999 999988889999999999999887 589999999985 56899999998644
No 234
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=98.36 E-value=8.3e-07 Score=71.20 Aligned_cols=79 Identities=15% Similarity=0.103 Sum_probs=60.6
Q ss_pred ccceeeEEEecccCCCCC------CCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCc--chhh
Q psy9829 86 VGSTFVGSVLGARGALDL------ANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGV--VGSW 156 (333)
Q Consensus 86 ~G~~~g~~i~gg~d~p~~------~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv--~~a~ 156 (333)
...||||.+.|+.+.++. ...+.+++|++|.+||.| +.. +|++||+ +.||+..+.+. ....
T Consensus 17 ~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA---------~~a-Gl~~GD~I~~vng~~v~~~~~~~~~ 86 (109)
T 1q3o_A 17 DSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVA---------WRA-GLRMGDFLIEVNGQNVVKVGHRQVV 86 (109)
T ss_dssp TTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHH---------HHT-TCCTTCEEEEETTEECTTCCHHHHH
T ss_pred CCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHH---------HHc-CCCCCCEEEEECCEECCCCCHHHHH
Confidence 356999999999986532 123458999999998765 332 3799999 68999999998 4556
Q ss_pred hhhhhcCCceEEEEEEee
Q psy9829 157 QVFRIAHNCISAQIKRTH 174 (333)
Q Consensus 157 ~alr~~g~~v~L~v~R~~ 174 (333)
.+++..+..+.|.|.|..
T Consensus 87 ~~l~~~~~~v~l~v~~~~ 104 (109)
T 1q3o_A 87 NMIRQGGNTLMVKVVMVT 104 (109)
T ss_dssp HHHHHTTTEEEEEEEEEE
T ss_pred HHHHhCCCEEEEEEEECC
Confidence 677777888999998854
No 235
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.35 E-value=3.9e-07 Score=75.07 Aligned_cols=62 Identities=18% Similarity=0.327 Sum_probs=55.2
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC-CceEEEEeccCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSK-EKLSLTIRREVP 284 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~-~~v~L~V~R~~~ 284 (333)
.+++|.+|.++ ++|++.|-|++||+|++|||+.+.+++++++.++|+... +.+.|+|.|+..
T Consensus 33 ~~~~V~~V~~~---spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~g~ 95 (127)
T 1b8q_A 33 PPVIISDLIRG---GAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRGPE 95 (127)
T ss_dssp SCEEECCCSSS---SSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHSCCSSCEEEEEECCCC
T ss_pred CCEEEEEeCCC---CHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEeCCc
Confidence 37999999999 888887756999999999999999999999999999854 689999999764
No 236
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=98.35 E-value=4.1e-07 Score=70.88 Aligned_cols=71 Identities=10% Similarity=-0.014 Sum_probs=55.8
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
+.+|||.+.++ ..+.+++|++|.+||.| +..++|++||+ +.||+..+.+.+ ....+|+.++
T Consensus 14 ~~~lG~~i~~~-------~~~~~~~V~~v~~gspA---------~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 77 (93)
T 3o46_A 14 REPLGATIKKD-------EQTGAIIVARIMRGGAA---------DRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQ 77 (93)
T ss_dssp SSCCCEEEEEC-------TTTCCEEEEEECTTSHH---------HHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCC
T ss_pred CCCccEEEEec-------CCCCCEEEEEECCCCHH---------HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 56999999986 13678999999997754 44334799999 689999997764 5567788888
Q ss_pred CceEEEEEEe
Q psy9829 164 NCISAQIKRT 173 (333)
Q Consensus 164 ~~v~L~v~R~ 173 (333)
..++|.|.|.
T Consensus 78 ~~v~l~v~~~ 87 (93)
T 3o46_A 78 GAITFKIIPG 87 (93)
T ss_dssp EEEEEEEECC
T ss_pred CeEEEEEEeC
Confidence 8899998763
No 237
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=98.34 E-value=5e-07 Score=73.12 Aligned_cols=72 Identities=13% Similarity=0.095 Sum_probs=55.7
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
..||||.+.||.+. +.+++|++|.+||.| +..++|++||+ +.||+..+.+.+ ..+.+++..+
T Consensus 34 ~~glG~~l~~~~~~------~~gv~V~~V~~~spA---------~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g 98 (112)
T 2r4h_A 34 AKGFGFSLRGGREY------NMDLYVLRLAEDGPA---------ERSGKMRIGDEILEINGETTKNMKHSRAIELIKNGG 98 (112)
T ss_dssp TTBTSEEEEECGGG------TCCEEEEEECTTSHH---------HHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHTTT
T ss_pred CCccCEEEeccccC------CCCEEEEEECCCChH---------HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 45899999998753 468999999998755 43223799999 589999998874 4455666678
Q ss_pred CceEEEEEEe
Q psy9829 164 NCISAQIKRT 173 (333)
Q Consensus 164 ~~v~L~v~R~ 173 (333)
..++|.|.|.
T Consensus 99 ~~v~l~v~R~ 108 (112)
T 2r4h_A 99 RRVRLFLKRG 108 (112)
T ss_dssp TEEEEEEECC
T ss_pred CeEEEEEEeC
Confidence 8899999873
No 238
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.33 E-value=6.8e-07 Score=70.01 Aligned_cols=73 Identities=14% Similarity=0.075 Sum_probs=56.6
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
..+|||.+.+|.+.+. .+++|++|.|||.| +..++|++||+ +.||+.++.+.+ ....+++..+
T Consensus 14 ~~~lG~~l~~~~~~~~-----~gv~V~~V~~~spA---------~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 79 (98)
T 2opg_A 14 RTGLGLSIVGGSDTLL-----GAIIIHEVYEEGAA---------CKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTP 79 (98)
T ss_dssp TTBTCEEEEECTTSTT-----CSEEEEEECTTSHH---------HHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCC
T ss_pred CCcccEEEecCCCCCC-----CCEEEEEECCCChH---------HhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 4689999999887653 58999999998754 43323799999 589999999874 4455666677
Q ss_pred CceEEEEEEe
Q psy9829 164 NCISAQIKRT 173 (333)
Q Consensus 164 ~~v~L~v~R~ 173 (333)
..+.|.|.|.
T Consensus 80 ~~v~l~v~R~ 89 (98)
T 2opg_A 80 QRVRLTLYRD 89 (98)
T ss_dssp SEEEEEEEEC
T ss_pred CeEEEEEEcC
Confidence 8899999873
No 239
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.33 E-value=1.1e-06 Score=69.71 Aligned_cols=75 Identities=13% Similarity=0.127 Sum_probs=55.4
Q ss_pred ccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhh-
Q psy9829 86 VGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRI- 161 (333)
Q Consensus 86 ~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~- 161 (333)
.+.+|||.+.+..+. ..+++++|++|.+|| ||+...+|++||+ +.||+..+.+.+ ....+|+.
T Consensus 19 ~g~~lG~~i~~~~~~----~~~~~~~V~~V~~~s---------pA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~ 85 (101)
T 2yt7_A 19 RGEGLGVALVESGWG----SLLPTAVIANLLHGG---------PAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRET 85 (101)
T ss_dssp TTCCCCEEEEECCCS----SSSCCEEEEEECTTS---------TTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHT
T ss_pred CCCccCEEEEeCCCC----CCccCEEEEEECCCC---------HHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 356999999852221 246789999999976 4554445799999 589999996654 55667776
Q ss_pred -cCCceEEEEEEe
Q psy9829 162 -AHNCISAQIKRT 173 (333)
Q Consensus 162 -~g~~v~L~v~R~ 173 (333)
.+..++|.|.|.
T Consensus 86 ~~g~~v~l~v~R~ 98 (101)
T 2yt7_A 86 KSQTSVTLSIVHC 98 (101)
T ss_dssp TTSSEEEEEECCC
T ss_pred CCCCeEEEEEEeC
Confidence 677899999873
No 240
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=98.33 E-value=5.2e-07 Score=71.35 Aligned_cols=71 Identities=11% Similarity=0.032 Sum_probs=55.1
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
+.||||.+.++.+ ..++||++|.|||.| +..++|++||+ +.||+.++.+.+ ..+.+++..+
T Consensus 21 ~~glG~~~~~~~~-------~~gv~V~~V~~~spA---------~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 84 (104)
T 3i4w_A 21 STGLGFNIVGGEX-------GEGIFISFILAGGPA---------DLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAG 84 (104)
T ss_dssp TTBTSEEEEECC--------CCCEEEEEECTTSHH---------HHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHTSC
T ss_pred CCccCEEEECCCC-------CCCEEEEEECCCChH---------HhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 5699999998854 358999999998754 43333799999 689999998875 4455667778
Q ss_pred CceEEEEEEe
Q psy9829 164 NCISAQIKRT 173 (333)
Q Consensus 164 ~~v~L~v~R~ 173 (333)
..+.|.|+|.
T Consensus 85 ~~v~l~v~r~ 94 (104)
T 3i4w_A 85 QTVTIIAQYK 94 (104)
T ss_dssp SEEEEEEEEC
T ss_pred CeEEEEEEEC
Confidence 8899999884
No 241
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.32 E-value=8.3e-07 Score=72.29 Aligned_cols=75 Identities=15% Similarity=0.152 Sum_probs=55.8
Q ss_pred ccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhc
Q psy9829 86 VGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIA 162 (333)
Q Consensus 86 ~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~ 162 (333)
.+.+|||.|.||.+.. +.+++|++|.|||. |+..++|++||+ +.||+..+.+++ .++.+++..
T Consensus 25 ~~~~lG~~i~g~~~~~-----~~gv~V~~V~~~sp---------A~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~ 90 (119)
T 1x6d_A 25 EGAGLGFSLAGGADLE-----NKVITVHRVFPNGL---------ASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQA 90 (119)
T ss_dssp TTSCCSEEEECCSSSS-----CSSCEEEEECSSSH---------HHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHT
T ss_pred CCCccCEEEeCCCCCC-----CCCEEEEEECCCCh---------HHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 3679999999988752 47899999999765 454434799999 699999999864 455667666
Q ss_pred CCc-eEEEEEEee
Q psy9829 163 HNC-ISAQIKRTH 174 (333)
Q Consensus 163 g~~-v~L~v~R~~ 174 (333)
+.. +.++++|..
T Consensus 91 ~~~~~~l~v~R~~ 103 (119)
T 1x6d_A 91 REPRQAVIVTRKL 103 (119)
T ss_dssp TSSSEEEEEEECC
T ss_pred CCCeEEEEEEcCC
Confidence 555 457777643
No 242
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.32 E-value=4.8e-07 Score=68.95 Aligned_cols=70 Identities=10% Similarity=0.124 Sum_probs=54.7
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
..+|||.+.||.+. +.+++|++|.|||.| +. .+|++||+ +.||+..+.+.+ ....+++..+
T Consensus 10 ~~~~G~~l~gg~~~------~~~v~V~~V~~~spA---------~~-aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 73 (85)
T 1rgw_A 10 PGPWGFRLQGGKDF------NMPLTISRITPGSKA---------AQ-SQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSAS 73 (85)
T ss_dssp SSCCCEEECCCGGG------TSCCBEEEECTTSHH---------HH-SSCCCCSBEEEETTEECTTCCHHHHHHHHTTCS
T ss_pred CCccCEEEEeccCC------CCCeEEEEECCCCHH---------HH-cCCCCCCEEEEECCEECCCcCHHHHHHHHHcCC
Confidence 46899999998764 357999999998755 32 35799999 589999999883 4455566667
Q ss_pred CceEEEEEE
Q psy9829 164 NCISAQIKR 172 (333)
Q Consensus 164 ~~v~L~v~R 172 (333)
..+.|.|.|
T Consensus 74 ~~v~l~v~R 82 (85)
T 1rgw_A 74 YNLSLTLQK 82 (85)
T ss_dssp SCEEEEEES
T ss_pred CeEEEEEEe
Confidence 779999977
No 243
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=98.32 E-value=6.2e-07 Score=68.47 Aligned_cols=71 Identities=20% Similarity=0.157 Sum_probs=53.6
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhc-
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIA- 162 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~- 162 (333)
..||||.+.||.+ .+.+++|++|.|||.| +..+.|++||+ +.||+..+.+.+ ....+++..
T Consensus 10 ~~g~G~~i~~~~~------~~~~~~V~~v~~~spA---------~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 74 (85)
T 2i04_A 10 SRGFGFTVVGGDE------PDEFLQIKSLVLDGPA---------ALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIP 74 (85)
T ss_dssp TTBSSEEEEECCS------TTBCEEEEEECTTSHH---------HHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSC
T ss_pred CCCCCEEEEcccC------CCCCEEEEEECCCChH---------HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 4589999998764 2568999999997754 43333799999 689999998763 445566665
Q ss_pred -CCceEEEEEE
Q psy9829 163 -HNCISAQIKR 172 (333)
Q Consensus 163 -g~~v~L~v~R 172 (333)
+..++|.|.|
T Consensus 75 ~g~~v~l~v~R 85 (85)
T 2i04_A 75 IGASVDLELCR 85 (85)
T ss_dssp TTCEEEEEEEC
T ss_pred CCCeEEEEEEC
Confidence 6778888865
No 244
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.31 E-value=5.3e-07 Score=73.63 Aligned_cols=75 Identities=11% Similarity=0.014 Sum_probs=58.5
Q ss_pred ccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhc
Q psy9829 86 VGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIA 162 (333)
Q Consensus 86 ~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~ 162 (333)
.+.+|||.+.++.+. ++.++||++|.|||.| +..++|++||+ +.||+..+.+.+ ..+.+|+..
T Consensus 25 ~~~~lG~~i~~~~~~-----~~~~~~V~~V~~~spA---------~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~~ 90 (117)
T 1v62_A 25 PGSALGISLTTTSLR-----NKSVITIDRIKPASVV---------DRSGALHPGDHILSIDGTSMEHCSLLEATKLLASI 90 (117)
T ss_dssp TTCCCCCEEEEECCS-----SSCEEEEEECCTTSHH---------HHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHSC
T ss_pred CCCcccEEEEccCCC-----CCCCEEEEEECCCCHH---------HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 357999999988763 2356999999997754 54444799999 689999997764 556677777
Q ss_pred CCceEEEEEEee
Q psy9829 163 HNCISAQIKRTH 174 (333)
Q Consensus 163 g~~v~L~v~R~~ 174 (333)
+..++|.|.|..
T Consensus 91 g~~v~l~v~r~~ 102 (117)
T 1v62_A 91 SEKVRLEILPVP 102 (117)
T ss_dssp SSEEEEEECCBT
T ss_pred CCeEEEEEEECC
Confidence 889999998854
No 245
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.31 E-value=1.8e-07 Score=77.57 Aligned_cols=77 Identities=6% Similarity=-0.056 Sum_probs=58.5
Q ss_pred cceeeEEEecccCCC--CCC-CCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhh
Q psy9829 87 GSTFVGSVLGARGAL--DLA-NYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFR 160 (333)
Q Consensus 87 G~~~g~~i~gg~d~p--~~~-~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr 160 (333)
+.+|||.|.||.+.- .+. ..++++||++|.+||.| +..+.|++||+ +.||+.++.+.+ ..+.+++
T Consensus 41 ~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA---------~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~ 111 (128)
T 1nf3_C 41 EKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLA---------QSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMI 111 (128)
T ss_dssp TSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHH---------HHHTCCCTTCEEEEETTEESTTCCHHHHHHHHH
T ss_pred CCCccEEEEccccccccccccCCCCCEEEEEECCCCHH---------HHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 469999999998742 110 13578999999997754 44333699999 689999997764 5566777
Q ss_pred hcCCceEEEEEE
Q psy9829 161 IAHNCISAQIKR 172 (333)
Q Consensus 161 ~~g~~v~L~v~R 172 (333)
..+..++|.|.|
T Consensus 112 ~~~~~v~l~v~r 123 (128)
T 1nf3_C 112 ANSRNLIITVRP 123 (128)
T ss_dssp HTTTSEEEEEEC
T ss_pred cCCCeEEEEEEE
Confidence 788889999987
No 246
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.31 E-value=7.6e-07 Score=69.14 Aligned_cols=77 Identities=16% Similarity=0.086 Sum_probs=57.5
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
..+|||.+.++.+.++ ..+.+++|++|.+||.| +..++|++||+ +.||+..+.+.+ ..+.+++..+
T Consensus 14 ~~~lG~~i~~~~~~~~--~~~~~~~V~~v~~~s~A---------~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 82 (97)
T 2iwn_A 14 VQGLGITIAGYIGDKK--LEPSGIFVKSITKSSAV---------EHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTG 82 (97)
T ss_dssp TTBSCEEEECCCCC------CCCCEEEEECTTCHH---------HHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHTCC
T ss_pred CCCCcEEEEccCCCCC--CCCCCEEEEEeCCCChH---------HhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 4689999999988776 35789999999998754 43323799999 689999999874 3345556678
Q ss_pred CceEEEEEEee
Q psy9829 164 NCISAQIKRTH 174 (333)
Q Consensus 164 ~~v~L~v~R~~ 174 (333)
..+.|.|.|..
T Consensus 83 ~~v~l~v~r~g 93 (97)
T 2iwn_A 83 QTVLLTLMRRG 93 (97)
T ss_dssp SEEEEEEEEEE
T ss_pred CeEEEEEEeCC
Confidence 88999998743
No 247
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=98.31 E-value=6.8e-07 Score=68.62 Aligned_cols=72 Identities=14% Similarity=0.170 Sum_probs=57.0
Q ss_pred ccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCc--chhhhhhhhc
Q psy9829 86 VGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGV--VGSWQVFRIA 162 (333)
Q Consensus 86 ~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv--~~a~~alr~~ 162 (333)
...+|||.+.||.+. +.+++|++|.|||.| +. .+|++||+ +.+|+..+.+. .....+++..
T Consensus 10 ~~~~lG~~l~~~~~~------~~g~~V~~V~~~spA---------~~-aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 73 (87)
T 2pa1_A 10 GPAPWGFRITGGRDF------HTPIMVTKVAERGKA---------KD-ADLRPGDIIVAINGESAEGMLHAEAQSKIRQS 73 (87)
T ss_dssp SSSCCSEEEEEEGGG------TEEEEEEEECSSSHH---------HH-TTCCTTCEEEEETTEESTTCCHHHHHHHHHTC
T ss_pred CCCccCEEEecccCC------CCCEEEEEECCCChH---------HH-cCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 456899999998764 468999999997754 43 35799999 58999999995 4556677776
Q ss_pred CCceEEEEEEe
Q psy9829 163 HNCISAQIKRT 173 (333)
Q Consensus 163 g~~v~L~v~R~ 173 (333)
+..+.|.|.|.
T Consensus 74 ~~~v~l~v~R~ 84 (87)
T 2pa1_A 74 PSPLRLQLDRI 84 (87)
T ss_dssp CSSEEEEEEEC
T ss_pred CCeEEEEEEec
Confidence 67899999883
No 248
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.31 E-value=7.3e-07 Score=68.74 Aligned_cols=72 Identities=10% Similarity=0.082 Sum_probs=55.9
Q ss_pred ccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhc
Q psy9829 86 VGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIA 162 (333)
Q Consensus 86 ~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~ 162 (333)
...+|||.+.||.+. +.+++|++|.|||.| +.. +|++||+ +.+|+..+.+.+ ....+++..
T Consensus 11 ~~~~~G~~l~gg~~~------~~~v~V~~V~~~spA---------~~a-Gl~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 74 (89)
T 2q3g_A 11 GPAPWGFRLQGGKDF------NVPLSISRLTPGGKA---------AQA-GVAVGDWVLSIDGENAGSLTHIEAQNKIRAC 74 (89)
T ss_dssp SSSCCCEEEEEEGGG------TEEEEEEEECTTSHH---------HHT-TCCTTCEEEEETTEEGGGCCHHHHHHHHHTC
T ss_pred CCCcccEEEECcCCC------CCCEEEEEECCCCHH---------HHc-CCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 457899999998863 468999999998755 332 3799999 689999999873 444566667
Q ss_pred CCceEEEEEEe
Q psy9829 163 HNCISAQIKRT 173 (333)
Q Consensus 163 g~~v~L~v~R~ 173 (333)
+..+.|.|.|.
T Consensus 75 g~~v~l~v~R~ 85 (89)
T 2q3g_A 75 GERLSLGLSRA 85 (89)
T ss_dssp TTEEEEEEEEE
T ss_pred CCEEEEEEEeC
Confidence 88899999874
No 249
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=98.29 E-value=5.4e-07 Score=74.80 Aligned_cols=73 Identities=19% Similarity=0.138 Sum_probs=57.2
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhc-
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIA- 162 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~- 162 (333)
..||||.+.||.+ .+.+++|++|.+||.| +..++|++||+ +.||+..+.+.+ ..+.+|+.+
T Consensus 28 ~~g~G~~i~g~~~------~~~~v~V~~V~~~spA---------~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~ 92 (129)
T 2kpk_A 28 SRGFGFTVVGGDE------PDEFLQIKSLVLDGPA---------ALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIP 92 (129)
T ss_dssp SSCCSEEEEEEEE------TTEEEEEEEECTTSHH---------HHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSC
T ss_pred CCcccEEEeCccC------CCCCEEEEEECCCChH---------HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 4599999999875 2568999999997754 43334799999 589999999875 556677776
Q ss_pred -CCceEEEEEEee
Q psy9829 163 -HNCISAQIKRTH 174 (333)
Q Consensus 163 -g~~v~L~v~R~~ 174 (333)
+..++|.|.|..
T Consensus 93 ~g~~v~l~v~R~~ 105 (129)
T 2kpk_A 93 IGASVDLELCRGY 105 (129)
T ss_dssp TTEEEEEEEEECS
T ss_pred CCCeEEEEEEeCC
Confidence 677999998854
No 250
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.29 E-value=7.1e-07 Score=72.68 Aligned_cols=71 Identities=8% Similarity=-0.008 Sum_probs=54.6
Q ss_pred ceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCc-cccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 88 STFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGE-MSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 88 ~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~-l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
.+|||.+.||.+. +.++||++|.|||. |+.. .+|++||+ +.||+.++.+.+ .++.+++..+
T Consensus 27 ~~~G~~l~gg~~~------~~~v~V~~V~~~sp---------A~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~~~ 91 (119)
T 2cs5_A 27 GRFGFNVKGGYDQ------KMPVIVSRVAPGTP---------ADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASC 91 (119)
T ss_dssp SCCSEEEEEEGGG------TEEEEEEEECSSST---------TTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHHHH
T ss_pred CCcCEEEecccCC------CCCeEEEEECCCCH---------HHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Confidence 4699999999763 35799999999765 4543 35799999 589999999874 4455666664
Q ss_pred ----CceEEEEEEe
Q psy9829 164 ----NCISAQIKRT 173 (333)
Q Consensus 164 ----~~v~L~v~R~ 173 (333)
..+.|.|.|.
T Consensus 92 ~~~~~~v~l~v~R~ 105 (119)
T 2cs5_A 92 ERHSGELMLLVRPN 105 (119)
T ss_dssp HCCSSCEEEEEECC
T ss_pred ccCCCEEEEEEEcc
Confidence 4799999884
No 251
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=98.29 E-value=1e-06 Score=70.69 Aligned_cols=70 Identities=6% Similarity=-0.091 Sum_probs=54.9
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhc-
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIA- 162 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~- 162 (333)
..+|||+|.++ ++..+||++|.+||+ |+....|++||. +.||++++.|.+ ..++.||.+
T Consensus 15 ~~~LG~tI~~~--------g~g~~~I~rI~~gg~---------a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~ 77 (95)
T 3gge_A 15 EDSLGLTITDN--------GVGYAFIKRIKDGGV---------IDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELK 77 (95)
T ss_dssp SSCCCEEEECS--------SSSCCEEEEECTTSH---------HHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSC
T ss_pred CCCceEEEEcC--------CCCcEEEEEEcCCCh---------HHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCC
Confidence 57999999863 245689999999765 566677899999 589999999986 667788874
Q ss_pred -CCceEEEEEEe
Q psy9829 163 -HNCISAQIKRT 173 (333)
Q Consensus 163 -g~~v~L~v~R~ 173 (333)
+.+++|.+-+.
T Consensus 78 ~g~~~~L~lv~p 89 (95)
T 3gge_A 78 KEELFTMKLIEP 89 (95)
T ss_dssp TTCEEEEEEEEE
T ss_pred CCCEEEEEEECc
Confidence 45788887664
No 252
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=98.28 E-value=8.4e-07 Score=71.56 Aligned_cols=72 Identities=14% Similarity=0.184 Sum_probs=54.6
Q ss_pred cccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhh
Q psy9829 85 PVGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRI 161 (333)
Q Consensus 85 E~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~ 161 (333)
+.+.||||.+.+ .+.+++|++|.|||. |+..++|++||+ +.||+.++.++. .+..+++.
T Consensus 11 ~~~~glG~~i~~---------~~~gv~V~~V~~gsp---------A~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~ 72 (106)
T 2la8_A 11 KAGKELGLSLSP---------NEIGCTIADLIQGQY---------PEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKG 72 (106)
T ss_dssp BSSSTTCCEEEE---------CSSSEEEEECCTTSC---------HHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHS
T ss_pred CCCCccCEEEEe---------CCCCEEEEEECCCCH---------HHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhC
Confidence 446789999876 246899999999765 454434799999 589999999875 33455666
Q ss_pred cCCceEEEEEEee
Q psy9829 162 AHNCISAQIKRTH 174 (333)
Q Consensus 162 ~g~~v~L~v~R~~ 174 (333)
.+..+.|.|.|..
T Consensus 73 ~~~~v~l~v~R~~ 85 (106)
T 2la8_A 73 ANGKVSMEVTRPK 85 (106)
T ss_dssp CBSCEEEEEEECC
T ss_pred CCCeEEEEEEeCC
Confidence 7778999998854
No 253
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.28 E-value=6.5e-07 Score=69.38 Aligned_cols=71 Identities=10% Similarity=0.178 Sum_probs=55.3
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
..+|||.+.||.+. +.+++|++|.|||.| +..++|++||+ +.||+.++.+.+ ..+.+++..+
T Consensus 15 ~~glG~~l~~~~~~------~~~~~V~~V~~~spA---------~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 79 (93)
T 2dkr_A 15 DEGLGFNIMGGKEQ------NSPIYISRVIPGGVA---------DRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQ 79 (93)
T ss_dssp TTCCCEEEECSSSS------SCCCEEEEECTTSHH---------HHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCC
T ss_pred CCCccEEEecccCC------CCCEEEEEECCCCHH---------HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 56999999988652 468999999997754 43223799999 689999999863 4455667677
Q ss_pred CceEEEEEE
Q psy9829 164 NCISAQIKR 172 (333)
Q Consensus 164 ~~v~L~v~R 172 (333)
..+.|.|.|
T Consensus 80 ~~v~l~v~r 88 (93)
T 2dkr_A 80 GSVKLVVRS 88 (93)
T ss_dssp SEEEEEECC
T ss_pred CcEEEEEEe
Confidence 789999987
No 254
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.28 E-value=1.1e-06 Score=70.58 Aligned_cols=75 Identities=11% Similarity=0.013 Sum_probs=57.7
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhc-
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIA- 162 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~- 162 (333)
..||||.+.++.+.+. ++.+++|++|.|||.| +..++|++||+ +.||+..+.+.+ ....+++..
T Consensus 21 ~~glG~~~~~~~~~~~---~~~g~~V~~V~~~spA---------~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 88 (111)
T 2koj_A 21 TEGLGFSITSRDVTIG---GSAPIYVKNILPRGAA---------IQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTK 88 (111)
T ss_dssp TTBTCEEEEECSCSSS---SSSCEEEEEECSSSHH---------HHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCC
T ss_pred CCccCEEEEeccCCCC---CCcCEEEEEECCCChH---------HHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 4589999999876543 5789999999998755 43323799999 589999998863 455666664
Q ss_pred -CCceEEEEEEe
Q psy9829 163 -HNCISAQIKRT 173 (333)
Q Consensus 163 -g~~v~L~v~R~ 173 (333)
+..+.|.|.|.
T Consensus 89 ~g~~v~l~v~R~ 100 (111)
T 2koj_A 89 MEGTVSLLVFRQ 100 (111)
T ss_dssp CSSEEEEEEEEC
T ss_pred CCCeEEEEEEeC
Confidence 77899999884
No 255
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=98.27 E-value=1.2e-06 Score=69.71 Aligned_cols=78 Identities=18% Similarity=0.172 Sum_probs=58.3
Q ss_pred cceeeEEEecccCCCC-C---C--CCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhh
Q psy9829 87 GSTFVGSVLGARGALD-L---A--NYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQ 157 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~-~---~--~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~ 157 (333)
..||||++.|+.+... + . ...|++||++|.+||.| +.. +|++||+ +.||++.+.+.+ ....
T Consensus 16 ~~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA---------~~a-Gl~~GD~I~~ing~~v~~~~~~~~~~ 85 (107)
T 3qe1_A 16 ESGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAA---------DRA-GVRKGDRILEVNGVNVEGATHKQVVD 85 (107)
T ss_dssp TTBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHH---------HHH-TCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred CCCCCEEEEcccccCCcceeccccccCCceEEEEECCCCHH---------HHc-CCCCCCEEEEECCEECCCCCHHHHHH
Confidence 4589999999865432 0 0 01477899999997754 443 3799999 689999999764 5567
Q ss_pred hhhhcCCceEEEEEEee
Q psy9829 158 VFRIAHNCISAQIKRTH 174 (333)
Q Consensus 158 alr~~g~~v~L~v~R~~ 174 (333)
+++..+..+.|.|.|..
T Consensus 86 ~l~~~g~~v~l~v~r~~ 102 (107)
T 3qe1_A 86 LIRAGEKELILTVLSVE 102 (107)
T ss_dssp HHHHCSSEEEEEEECSS
T ss_pred HHHcCCCEEEEEEEcCC
Confidence 78878899999998844
No 256
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=98.27 E-value=1.1e-06 Score=68.08 Aligned_cols=72 Identities=10% Similarity=0.094 Sum_probs=57.9
Q ss_pred ccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhc
Q psy9829 86 VGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIA 162 (333)
Q Consensus 86 ~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~ 162 (333)
.+.+|||.+.||.+. +.+++|++|.|||.| +. .+|++||+ +.+|+..+.+.. ....+++..
T Consensus 11 ~~~~~G~~l~~~~~~------~~g~~V~~V~~~spA---------~~-aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 74 (91)
T 2pkt_A 11 GPGPWGFRLVGGKDF------EQPLAISRVTPGSKA---------AL-ANLCIGDVITAIDGENTSNMTHLEAQNRIKGC 74 (91)
T ss_dssp SSSCCSEEEEEEGGG------TEEEEEEEECTTSHH---------HH-TTCCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred CCCCCCEEEEccCCC------CCCeEEEEECCCCHH---------HH-cCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 356899999998763 368999999998754 43 23799999 589999999987 666777777
Q ss_pred CCceEEEEEEe
Q psy9829 163 HNCISAQIKRT 173 (333)
Q Consensus 163 g~~v~L~v~R~ 173 (333)
+..+.|.|.|.
T Consensus 75 g~~v~l~v~R~ 85 (91)
T 2pkt_A 75 TDNLTLTVARS 85 (91)
T ss_dssp SSEEEEEEEEE
T ss_pred CCeEEEEEEEC
Confidence 88899999884
No 257
>3a00_A Guanylate kinase, GMP kinase; domain movement, dimerization, acetylation, ATP-binding, nucleotide-binding, phosphoprotein, transferase; 1.80A {Saccharomyces cerevisiae} PDB: 1ex6_A* 1ex7_A 1gky_A* 2zzz_A 3sqk_A 4f4j_A 2zzy_A
Probab=98.27 E-value=2.9e-07 Score=79.95 Aligned_cols=79 Identities=11% Similarity=0.172 Sum_probs=47.3
Q ss_pred CCCCCCeeehHHHHHHHHcCCEEEEecCccccccccc-cccccEEEEEecCchhhHH-hhhcCCCcchhhHHHHHhhccc
Q psy9829 7 SKKCSGIIRLSAIRDMMDRGRHGLLDITPNAVDRLNY-AQFYPIVIFLRAETKSNVK-ELRAGIPKYHTNLARQRSRVLF 84 (333)
Q Consensus 7 ~~~~~~~tsl~sVr~V~e~gkhCILDv~~~avk~L~~-~~l~PivIfIkp~s~~~lk-~lr~~~~Es~~ki~~raer~~q 84 (333)
.....+.++.+.|++++++|+.||||++.++.+.|+. ..+.+.+|||.||+.+.++ +++.|.+++.+.+.+|.++...
T Consensus 73 ~~~~~yg~~~~~i~~~l~~g~~~il~~~~~g~~~l~~~~~~~~~~i~i~~p~~~~l~~Rl~~Rg~~~~~~i~~rl~~~~~ 152 (186)
T 3a00_A 73 FSGNYYGSTVASVKQVSKSGKTCILDIDMQGVKSVKAIPELNARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQA 152 (186)
T ss_dssp ETTEEEEEEHHHHHHHHHTTCEEEEECCHHHHHHHHTCGGGCCEEEEEECSCC---------------------------
T ss_pred EeceeccCcHHHHHHHHHcCCeEEEEEcHHHHHHHHHhcCCCeEEEEEECcCHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 3445677888999999999999999999999999999 8899999999999977766 7888877777777777766655
Q ss_pred c
Q psy9829 85 P 85 (333)
Q Consensus 85 E 85 (333)
|
T Consensus 153 ~ 153 (186)
T 3a00_A 153 E 153 (186)
T ss_dssp -
T ss_pred H
Confidence 4
No 258
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=98.27 E-value=9e-07 Score=68.36 Aligned_cols=70 Identities=11% Similarity=0.079 Sum_probs=55.7
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCc--chhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGV--VGSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv--~~a~~alr~~g 163 (333)
..||||.+.++.+ +.+++|++|.|||.| +.. +|++||+ +.+|+..+.+. .....+++..+
T Consensus 14 ~~g~G~~~~~~~~-------~~gv~V~~V~~~spA---------~~a-Gl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 76 (90)
T 2he4_A 14 PQGYGFNLHSDKS-------RPGQYIRSVDPGSPA---------ARS-GLRAQDRLIEVNGQNVEGLRHAEVVASIKARE 76 (90)
T ss_dssp TTBCCEEEEECSS-------SSSEEEEEECTTSHH---------HHH-TCCTTCEEEEETTEECTTSCHHHHHHHHTTSS
T ss_pred CCCccEEEEccCC-------CCCEEEEEECCCChH---------HHC-CCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 4689999998754 368999999997754 443 3799999 68999999998 45566777778
Q ss_pred CceEEEEEEe
Q psy9829 164 NCISAQIKRT 173 (333)
Q Consensus 164 ~~v~L~v~R~ 173 (333)
..+.|.|.|.
T Consensus 77 ~~v~l~v~r~ 86 (90)
T 2he4_A 77 DEARLLVVGP 86 (90)
T ss_dssp SEEEEEEECC
T ss_pred CcEEEEEEcc
Confidence 8899999873
No 259
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.26 E-value=1.8e-06 Score=71.15 Aligned_cols=64 Identities=25% Similarity=0.396 Sum_probs=55.8
Q ss_pred CeEEEEEEcc--CcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCCCC
Q psy9829 220 NKIFVKEVTH--RLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPRPT 287 (333)
Q Consensus 220 ~~IfI~~I~~--g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~~~ 287 (333)
.+++|.+|.+ + ++|++- .|++||+|++|||+.+.+++|++...+|+...+.+.|+|.|+....+
T Consensus 44 ~gv~V~~V~~~~~---spA~~a-GL~~GD~Il~Vng~~v~~~~~~dl~~~l~~~g~~v~l~v~R~g~~~~ 109 (118)
T 2yub_A 44 TTVQVKEVNRMHI---SPNNRN-AIHPGDRILEINGTPVRTLRVEEVEDAIKQTSQTLQLLIEHDPVPQR 109 (118)
T ss_dssp CEEEEEECCTTTS---CTTHHH-HCCTTCCEEEESSSBTTTSCHHHHHHHHHCCSSCEEEEEEECSSCCC
T ss_pred CcEEEEEecCCCC---ChHHHc-CCCCCCEEEEECCEECCCcCHHHHHHHHHhCCCEEEEEEEECCEEEe
Confidence 4799999999 8 666654 49999999999999999999999999999887789999999876544
No 260
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.26 E-value=1.2e-06 Score=70.34 Aligned_cols=71 Identities=18% Similarity=0.231 Sum_probs=54.9
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
+.+|||.+.|+.+ .+++|++|.+||.| +..++|++||+ +.||+..+.+.+ ....+++.++
T Consensus 25 ~~~lG~~l~~~~~--------~g~~V~~V~~~spA---------~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g 87 (111)
T 2dlu_A 25 GSGLGFGIVGGKT--------SGVVVRTIVPGGLA---------DRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCG 87 (111)
T ss_dssp SSCCCEEEECCSS--------SSBEEEEECTTSSH---------HHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHHC
T ss_pred CCccCEEEeccCC--------CCEEEEEECCCCHH---------HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 5689999987643 57999999997754 43333799999 589999998764 4556677778
Q ss_pred CceEEEEEEee
Q psy9829 164 NCISAQIKRTH 174 (333)
Q Consensus 164 ~~v~L~v~R~~ 174 (333)
..+.|.|.|..
T Consensus 88 ~~v~l~v~R~~ 98 (111)
T 2dlu_A 88 NSVRMLVARDP 98 (111)
T ss_dssp SEEEEEEEESC
T ss_pred CeEEEEEEeCC
Confidence 88999998843
No 261
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.25 E-value=1.5e-06 Score=68.21 Aligned_cols=75 Identities=13% Similarity=0.154 Sum_probs=55.9
Q ss_pred cccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhh
Q psy9829 85 PVGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRI 161 (333)
Q Consensus 85 E~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~ 161 (333)
..+.+|||.+.++.+ ...+++|++|.|||.| +..++|++||+ +.||+..+.+.+ ....+++.
T Consensus 13 ~~~~~lG~~i~~~~~------~~~~~~V~~V~~~spA---------~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 77 (97)
T 1n7e_A 13 RYGGPLGITISGTEE------PFDPIIISSLTKGGLA---------ERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQM 77 (97)
T ss_dssp CTTSCCCEEEECCSS------TTSCCEEEEECTTSHH---------HHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred eCCCCcCEEEEcccC------CCCCEEEEEECCCCHH---------HHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 345679999998743 2357999999998754 43333799999 589999998763 44556666
Q ss_pred cCCceEEEEEEee
Q psy9829 162 AHNCISAQIKRTH 174 (333)
Q Consensus 162 ~g~~v~L~v~R~~ 174 (333)
.+..+.|.|.|..
T Consensus 78 ~g~~v~l~v~R~~ 90 (97)
T 1n7e_A 78 AGETVTLKIKKQT 90 (97)
T ss_dssp CCSEEEEEEECCC
T ss_pred CCCeEEEEEEeCC
Confidence 7888999998744
No 262
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=98.24 E-value=1e-06 Score=69.33 Aligned_cols=71 Identities=15% Similarity=0.200 Sum_probs=53.7
Q ss_pred ccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhc
Q psy9829 86 VGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIA 162 (333)
Q Consensus 86 ~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~ 162 (333)
.+.||||.+.+ .+.+++|++|.|||. |+..++|++||+ +.||+.++.+.. .....++..
T Consensus 18 ~~~glG~~~~~---------~~~gv~V~~V~~~sp---------A~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~ 79 (96)
T 2qkv_A 18 AGKELGLSLSP---------NEIGCTIADLIQGQY---------PEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKGA 79 (96)
T ss_dssp TTBCCCEEEEE---------CSSSEEEEEECTTSC---------HHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred CCCCccEEEEe---------CCCcEEEEEeCCCCh---------HHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 45689999876 136899999999764 454434799999 589999998875 334455667
Q ss_pred CCceEEEEEEee
Q psy9829 163 HNCISAQIKRTH 174 (333)
Q Consensus 163 g~~v~L~v~R~~ 174 (333)
+..+.|.|.|..
T Consensus 80 ~~~v~l~v~R~~ 91 (96)
T 2qkv_A 80 NGKVSMEVTRPK 91 (96)
T ss_dssp SSEEEEEEECCC
T ss_pred CCcEEEEEEeCC
Confidence 778999998854
No 263
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.24 E-value=1.1e-06 Score=72.81 Aligned_cols=79 Identities=14% Similarity=0.046 Sum_probs=57.6
Q ss_pred cceeeEEEecccCCCCC---CCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCc--chhhhhhh
Q psy9829 87 GSTFVGSVLGARGALDL---ANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGV--VGSWQVFR 160 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~---~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv--~~a~~alr 160 (333)
..+|||.+.|+.+.... .+.+.+++|++|.|||. |+..++|++||+ +.||++.+.+. .....+++
T Consensus 35 ~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~sp---------A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 105 (123)
T 2iwq_A 35 SKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSP---------AGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIR 105 (123)
T ss_dssp TSCCSEEEEECC---------CCCCSEEEEEECSSSH---------HHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCCccEEEEeccCccccccccCCCCCEEEEEECCCCh---------HHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45899999998875421 12457999999999765 444333799999 58999999995 35667787
Q ss_pred hcCCceEEEEEEee
Q psy9829 161 IAHNCISAQIKRTH 174 (333)
Q Consensus 161 ~~g~~v~L~v~R~~ 174 (333)
..+..++|.|+|..
T Consensus 106 ~~~~~v~l~v~r~~ 119 (123)
T 2iwq_A 106 KAGNPVVFMVQSII 119 (123)
T ss_dssp HCCSSEEEEEECCC
T ss_pred cCCCeEEEEEEECC
Confidence 77789999998843
No 264
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=98.23 E-value=8.6e-07 Score=70.64 Aligned_cols=71 Identities=8% Similarity=0.007 Sum_probs=55.0
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCcc-ccccCCE-EEEceeeccCcc--hhhhhhhhc
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEM-SFRKGDV-FHVIDTLHNGVV--GSWQVFRIA 162 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l-~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~ 162 (333)
..+|||.+.||.+. +.+++|++|.|||.| +..+ +|++||+ +.||+.++.+.+ ..+..++..
T Consensus 28 ~~~~G~~~~gg~~~------~~~~~V~~V~~~spA---------~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~ 92 (107)
T 3nfk_A 28 NGRFGFNVKGGYDQ------KMPVIVSRVAPGTPA---------DLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKAS 92 (107)
T ss_dssp TSCCCEEEEEEGGG------TEEEEEEEECTTSHH---------HHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCG
T ss_pred CCCCCEEEEccCCC------CCCeEEEEECCCCch---------HHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhc
Confidence 46999999998763 357999999998755 4333 3799999 689999999885 445566666
Q ss_pred CC----ceEEEEEE
Q psy9829 163 HN----CISAQIKR 172 (333)
Q Consensus 163 g~----~v~L~v~R 172 (333)
+. .+.|.|+|
T Consensus 93 ~~~~~~~v~l~v~r 106 (107)
T 3nfk_A 93 CERHSGELMLLVRP 106 (107)
T ss_dssp GGSBTTBEEEEEEC
T ss_pred cccCCcEEEEEEEc
Confidence 64 89999976
No 265
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.21 E-value=6.2e-07 Score=71.11 Aligned_cols=74 Identities=15% Similarity=0.136 Sum_probs=57.1
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
..||||.+.++.+.+ ++.+++|++|.|||.| +..+.|++||+ +.||+..+.+.+ ..+.+++..+
T Consensus 21 ~~g~G~~l~~~~~~~----~~~~v~V~~V~~~spA---------~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 87 (104)
T 2djt_A 21 YAGFGLTLGGGRDVA----GDTPLAVRGLLKDGPA---------QRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAGG 87 (104)
T ss_dssp SSSCCEEEECCEETT----EECCCEEEEECTTCHH---------HHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHHTC
T ss_pred CCCccEEEEeccCCC----CCCCEEEEEECCCCHH---------HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 359999999998763 3678999999997754 43223799999 589999999864 4445566678
Q ss_pred CceEEEEEEe
Q psy9829 164 NCISAQIKRT 173 (333)
Q Consensus 164 ~~v~L~v~R~ 173 (333)
..+.|.|.|.
T Consensus 88 ~~v~l~v~R~ 97 (104)
T 2djt_A 88 PQLHLVIRRP 97 (104)
T ss_dssp SEEEEEECCC
T ss_pred CeEEEEEEEC
Confidence 8899999873
No 266
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.21 E-value=2.4e-06 Score=70.15 Aligned_cols=78 Identities=12% Similarity=0.000 Sum_probs=59.5
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccC--cchhhhhhhhc-
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNG--VVGSWQVFRIA- 162 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~g--v~~a~~alr~~- 162 (333)
..+|||.+.++.+++.. .+..++|++|.+||.| +..+.|++||+ +.||+..+++ ......+|+..
T Consensus 26 ~~glG~~l~~~~~~~~~--~~~~~~V~~V~~~spA---------~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 94 (122)
T 1v5q_A 26 VTGFGIQLQGSVFATET--LSSPPLISYIEADSPA---------ERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSS 94 (122)
T ss_dssp SSSSCEEEECCSCCSSS--CSSCCEEEEECTTSHH---------HHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHHHT
T ss_pred CCccCEEEecccccCCc--CCCCcEEEEECCCChH---------HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 47999999999776542 3567999999997654 43323799999 5899999988 44556677765
Q ss_pred -CCceEEEEEEeec
Q psy9829 163 -HNCISAQIKRTHF 175 (333)
Q Consensus 163 -g~~v~L~v~R~~~ 175 (333)
+..++|.|.|...
T Consensus 95 ~g~~v~l~v~R~~~ 108 (122)
T 1v5q_A 95 ITSKVTLEIEFDVA 108 (122)
T ss_dssp TTTCEEEEEEEECC
T ss_pred CCCeEEEEEEECCc
Confidence 6789999998553
No 267
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.21 E-value=1.5e-06 Score=67.13 Aligned_cols=68 Identities=12% Similarity=-0.061 Sum_probs=53.1
Q ss_pred ceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcCC
Q psy9829 88 STFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAHN 164 (333)
Q Consensus 88 ~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g~ 164 (333)
.+|||.+.+|.+ +.+++|++|.+||.| +. .+|++||+ +.||+..+.++. ..+.+++..+.
T Consensus 19 ~~~G~~~~~~~~-------~~gv~V~~V~~~spA---------~~-aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~ 81 (91)
T 1m5z_A 19 EDFGFSVADGLL-------EKGVYVKNIRPAGPG---------DL-GGLKPYDRLLQVNHVRTRDFDCCLVVPLIAESGN 81 (91)
T ss_dssp SSSSEEEEECTT-------SSCEEEEEECTTSHH---------HH-HTCCTTCEEEEETTEECTTCCHHHHHHHHHTSTT
T ss_pred CCccEEEEeccC-------CCCEEEEEECCCCHH---------HH-cCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 489999998754 468999999998765 33 23799999 589999999875 33455666788
Q ss_pred ceEEEEEE
Q psy9829 165 CISAQIKR 172 (333)
Q Consensus 165 ~v~L~v~R 172 (333)
.+.|.|.|
T Consensus 82 ~v~l~v~R 89 (91)
T 1m5z_A 82 KLDLVISR 89 (91)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 89999977
No 268
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=98.19 E-value=2.1e-06 Score=66.33 Aligned_cols=71 Identities=14% Similarity=0.061 Sum_probs=52.4
Q ss_pred ccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhc
Q psy9829 86 VGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIA 162 (333)
Q Consensus 86 ~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~ 162 (333)
...||||.+.|+.+ +.+++|++|.|||.| +.. +|++||+ +.+|++++.+.+ .....++..
T Consensus 12 ~~~g~G~~~~~~~~-------~~g~~V~~V~~~spA---------~~a-GL~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 74 (91)
T 1g9o_A 12 GPNGYGFHLHGEKG-------KLGQYIRLVEPGSPA---------EKA-GLLAGDRLVEVNGENVEKETHQQVVSRIRAA 74 (91)
T ss_dssp BTTBCCEEEEECTT-------CSSEEEEEECTTSHH---------HHT-TCCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred CCCcccEEEEecCC-------CCCEEEEEECCCCHH---------HHC-CCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 35689999998764 368999999997754 443 3799999 589999999864 445566666
Q ss_pred CCceEEEEEEe
Q psy9829 163 HNCISAQIKRT 173 (333)
Q Consensus 163 g~~v~L~v~R~ 173 (333)
+..+.+.+.|+
T Consensus 75 ~~~~~~~~~~r 85 (91)
T 1g9o_A 75 LNAVRLLVVDP 85 (91)
T ss_dssp SSEEEEEEECC
T ss_pred CCcEEEEEEcC
Confidence 66666655543
No 269
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.19 E-value=1.3e-06 Score=67.14 Aligned_cols=73 Identities=12% Similarity=0.144 Sum_probs=56.6
Q ss_pred cccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhh
Q psy9829 85 PVGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRI 161 (333)
Q Consensus 85 E~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~ 161 (333)
....+|||.+.||.+. +.+++|++|.|||.| +.. +|++||+ +.+|+..+.+.. ....+++.
T Consensus 10 ~~~~~~G~~l~~g~~~------~~~~~V~~V~~~spA---------~~a-Gl~~GD~I~~ing~~v~~~~~~~~~~~~~~ 73 (88)
T 2uzc_A 10 VGPAPWGFRLQGGKDF------NMPLTISSLKDGGKA---------AQA-NVRIGDVVLSIDGINAQGMTHLEAQNKIKG 73 (88)
T ss_dssp ESSSCCCEEEEEEGGG------TEEEEEEEECTTSHH---------HHT-TCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred cCCCcccEEEECcCCC------CCCeEEEEECCCChH---------HHc-CCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 3456899999998863 367999999998754 432 3799999 589999999984 44556666
Q ss_pred cCCceEEEEEEe
Q psy9829 162 AHNCISAQIKRT 173 (333)
Q Consensus 162 ~g~~v~L~v~R~ 173 (333)
.+..+.|.|.|.
T Consensus 74 ~g~~v~l~v~R~ 85 (88)
T 2uzc_A 74 CTGSLNMTLQRE 85 (88)
T ss_dssp CCSEEEEEEECC
T ss_pred CCCeEEEEEEeC
Confidence 688899999873
No 270
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=98.18 E-value=1.3e-06 Score=68.95 Aligned_cols=78 Identities=14% Similarity=0.040 Sum_probs=54.0
Q ss_pred ceeeEEEecccCCCCC---CCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCc--chhhhhhhh
Q psy9829 88 STFVGSVLGARGALDL---ANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGV--VGSWQVFRI 161 (333)
Q Consensus 88 ~~~g~~i~gg~d~p~~---~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv--~~a~~alr~ 161 (333)
.+|||.+.|+.+...- .+.+.+++|++|.|||.| +..++|++||+ +.||+..+++. .....+++.
T Consensus 16 ~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA---------~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 86 (103)
T 2fcf_A 16 KSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPA---------GKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRK 86 (103)
T ss_dssp CCCCEEEECCCC-------------EEEEEECSSSHH---------HHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred CceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcH---------HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 4799999998775421 113579999999997754 44323799999 68999999994 455667777
Q ss_pred cCCceEEEEEEee
Q psy9829 162 AHNCISAQIKRTH 174 (333)
Q Consensus 162 ~g~~v~L~v~R~~ 174 (333)
.+..++|.|.|..
T Consensus 87 ~~~~v~l~v~r~~ 99 (103)
T 2fcf_A 87 AGNPVVFMVQSII 99 (103)
T ss_dssp CCSSEEEEEECCC
T ss_pred CCCcEEEEEEECC
Confidence 7778999998843
No 271
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=98.17 E-value=1.4e-06 Score=67.52 Aligned_cols=67 Identities=6% Similarity=0.095 Sum_probs=51.9
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
...|||.+.+ ++||++|.|||.| +..++|++||+ +.||+.++.+.+ .++.+++.++
T Consensus 12 ~~~~G~~~~~------------gv~V~~V~~gspA---------~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~ 70 (88)
T 3e17_A 12 NEEYGLRLGS------------QIFVKEMTRTGLA---------TKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSR 70 (88)
T ss_dssp BCCCCEEEEE------------EEEEEEECTTSHH---------HHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTT
T ss_pred CCCCCEEEeC------------CEEEEEECCCCHH---------HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 3467777754 7999999997754 44444799999 589999998775 5667888899
Q ss_pred CceEEEEEEee
Q psy9829 164 NCISAQIKRTH 174 (333)
Q Consensus 164 ~~v~L~v~R~~ 174 (333)
+.++|.+.+..
T Consensus 71 ~~v~L~v~~~~ 81 (88)
T 3e17_A 71 GKLQLVVLRDL 81 (88)
T ss_dssp TEEEEEECCC-
T ss_pred CeEEEEEeCCC
Confidence 99999997744
No 272
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=98.14 E-value=1.7e-06 Score=67.12 Aligned_cols=71 Identities=8% Similarity=-0.050 Sum_probs=54.1
Q ss_pred cccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhh
Q psy9829 85 PVGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRI 161 (333)
Q Consensus 85 E~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~ 161 (333)
..+.+|||.+.++. +.+++|++|.|||. |+...+|++||+ +.||+.++.+++ ..+..|+.
T Consensus 10 ~~~~~lG~~i~~~~--------~~~~~I~~V~~gsp---------A~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~ 72 (88)
T 1kwa_A 10 NTDEPMGITLKMNE--------LNHCIVARIMHGGM---------IHRQGTLHVGDEIREINGISVANQTVEQLQKMLRE 72 (88)
T ss_dssp CSSSCCCEEEECSC--------GGGEEEEEECTTSH---------HHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHH
T ss_pred CCCCceeEEEEeCC--------CCCEEEEEECCCCH---------HHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 34678999999741 35799999999775 454345799999 689999999764 55667777
Q ss_pred cCCceEEEEEE
Q psy9829 162 AHNCISAQIKR 172 (333)
Q Consensus 162 ~g~~v~L~v~R 172 (333)
....++|.|.|
T Consensus 73 ~~~~v~l~v~r 83 (88)
T 1kwa_A 73 MRGSITFKIVP 83 (88)
T ss_dssp CCEEEEEEEEC
T ss_pred CCCcEEEEEEC
Confidence 66688888876
No 273
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.14 E-value=7.2e-07 Score=70.41 Aligned_cols=72 Identities=13% Similarity=0.085 Sum_probs=55.3
Q ss_pred ceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcCC
Q psy9829 88 STFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAHN 164 (333)
Q Consensus 88 ~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g~ 164 (333)
.||||.+.+|.+. +.+++|++|.+||.| +..+.|++||+ +.||+.++.+.+ ....+++..+.
T Consensus 22 ~g~G~~~~~~~~~------~~~~~V~~V~~~spA---------~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~ 86 (103)
T 1wfv_A 22 KGFGFSIRGGREY------KMDLYVLRLAEDGPA---------IRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGR 86 (103)
T ss_dssp TSSSBCCEEETTT------TEEEECCCBCTTSHH---------HHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHHCS
T ss_pred CcCCEEEeccccC------CCCEEEEEECCCChH---------HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 5899999988653 358999999997754 43323799999 589999999874 44556666788
Q ss_pred ceEEEEEEee
Q psy9829 165 CISAQIKRTH 174 (333)
Q Consensus 165 ~v~L~v~R~~ 174 (333)
.+.|.|.|..
T Consensus 87 ~v~l~v~R~~ 96 (103)
T 1wfv_A 87 RVRLLLKRGT 96 (103)
T ss_dssp EECEEEECTT
T ss_pred eEEEEEEECC
Confidence 8999998743
No 274
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.13 E-value=2.9e-06 Score=69.71 Aligned_cols=74 Identities=11% Similarity=0.005 Sum_probs=56.9
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhc-
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIA- 162 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~- 162 (333)
..+|||.+.++.+.+. ++.+++|++|.|||.| +..++|++||+ +.||++.+.+.+ ....+++..
T Consensus 40 ~~~lG~~l~~~~~~~~---g~~gv~V~~V~~gspA---------~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~ 107 (121)
T 2kom_A 40 TEGLGFSITSRDVTIG---GSAPIYVKNILPRGAA---------IQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRSTK 107 (121)
T ss_dssp TTCCCEEEECCCCSSS---SSCCEEEEEECTTSHH---------HHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHCC
T ss_pred CCcEeEEEEeccCCcC---CCCCEEEEEECCCChH---------HHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Confidence 4589999999876543 5789999999998755 43323799999 589999998863 455666664
Q ss_pred -CCceEEEEEE
Q psy9829 163 -HNCISAQIKR 172 (333)
Q Consensus 163 -g~~v~L~v~R 172 (333)
+..+.|.|.|
T Consensus 108 ~g~~v~l~v~R 118 (121)
T 2kom_A 108 MEGTVSLLVFR 118 (121)
T ss_dssp SSCEEEEEEEE
T ss_pred CCCEEEEEEEe
Confidence 6789999987
No 275
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.13 E-value=8.3e-07 Score=80.73 Aligned_cols=59 Identities=17% Similarity=0.294 Sum_probs=53.9
Q ss_pred eEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCce-EEEEeccC
Q psy9829 221 KIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKL-SLTIRREV 283 (333)
Q Consensus 221 ~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v-~L~V~R~~ 283 (333)
++||..|.++ ++|++.| |++||+|++|||+.+.+++++++..+|+...+.+ .|+|.|+.
T Consensus 34 gv~V~~V~~g---SpA~~aG-L~~GD~Il~VNG~~V~~~s~~dl~~~l~~~g~~v~~l~V~R~g 93 (216)
T 2krg_A 34 GQFIRSVDPD---SPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRET 93 (216)
T ss_dssp SCBEEEECTT---SHHHHHT-CCTTCBCCEETTEECTTCCTHHHHHHHHHHCSEEEEEECCHHH
T ss_pred CeEEEEeCCC---ChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCeEEEEEEEECC
Confidence 6999999999 8888877 9999999999999999999999999999888888 88887753
No 276
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.12 E-value=1.8e-06 Score=69.74 Aligned_cols=74 Identities=12% Similarity=0.054 Sum_probs=57.1
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
..+|||.+.+|.+.+. .+++|++|.+||.| +..++|++||+ +.||+..+.+.+ ....+++..+
T Consensus 27 ~~glG~~l~~~~~~~~-----~gv~V~~V~~~spA---------~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 92 (116)
T 2dm8_A 27 RSGLGLSIVGGKDTPL-----NAIVIHEVYEEGAA---------ARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQTP 92 (116)
T ss_dssp SSCCCCCCBCCTTSSC-----SSEECCCCCSSSHH---------HHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTCC
T ss_pred CCcccEEEeCCCCCCc-----CCEEEEEECCCChH---------HhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 4689999999887653 58999999998755 43333799999 589999999864 4455666677
Q ss_pred CceEEEEEEee
Q psy9829 164 NCISAQIKRTH 174 (333)
Q Consensus 164 ~~v~L~v~R~~ 174 (333)
..++|.|.|..
T Consensus 93 ~~v~l~v~R~~ 103 (116)
T 2dm8_A 93 QKVRLVVYRDE 103 (116)
T ss_dssp SEEEEEEECCS
T ss_pred CeEEEEEEeCC
Confidence 88999998743
No 277
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=98.11 E-value=2.6e-06 Score=71.92 Aligned_cols=76 Identities=13% Similarity=0.044 Sum_probs=56.8
Q ss_pred ceeeEEEecccCCCC----CC--CCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhh
Q psy9829 88 STFVGSVLGARGALD----LA--NYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQV 158 (333)
Q Consensus 88 ~~~g~~i~gg~d~p~----~~--~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~a 158 (333)
.+|||.+.||.|... |. +.+.+++|++|.|||.| +.. +|++||+ +.||+..+++++ ..+.+
T Consensus 38 ~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA---------~~a-GL~~GD~I~~vng~~v~~~~~~~~~~~ 107 (139)
T 2vz5_A 38 LILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPA---------EIA-GLQIGDKIMQVNGWDMTMVTHDQARKR 107 (139)
T ss_dssp EECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHH---------HHH-TCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred ccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHH---------HHC-CCCCCCEEEEECCEEcCCCCHHHHHHH
Confidence 389999999998532 21 24689999999997754 433 3799999 589999999753 44556
Q ss_pred hhh-cCCceEEEEEEe
Q psy9829 159 FRI-AHNCISAQIKRT 173 (333)
Q Consensus 159 lr~-~g~~v~L~v~R~ 173 (333)
++. .+..+.|.|.|.
T Consensus 108 l~~~~g~~v~l~v~R~ 123 (139)
T 2vz5_A 108 LTKRSEEVVRLLVTRQ 123 (139)
T ss_dssp HCCTTCSEEEEEEEEC
T ss_pred HHhCCCCEEEEEEEEC
Confidence 654 457799999883
No 278
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.10 E-value=3.2e-06 Score=67.26 Aligned_cols=70 Identities=13% Similarity=0.165 Sum_probs=54.9
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCc--chhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGV--VGSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv--~~a~~alr~~g 163 (333)
+.+|||.+.+|.+. +.+++|++|.|||.| +. .+|++||+ +.||+..+++. ...+.+++. +
T Consensus 26 ~~~lG~~~~~~~~~------~~g~~V~~V~~~spA---------~~-aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~-~ 88 (104)
T 1wi2_A 26 GAQLGFNIRGGKAS------QLGIFISKVIPDSDA---------HR-AGLQEGDQVLAVNDVDFQDIEHSKAVEILKT-A 88 (104)
T ss_dssp TCCCSEEEECCSSS------CCCCEEEEECTTSHH---------HH-HTCCTTCEEEEETTEECSSCCHHHHHHHHHH-S
T ss_pred CCCccEEEEcccCC------CCCEEEEEeCCCChH---------HH-cCCCCCCEEEEECCEECCCCCHHHHHHHHhC-C
Confidence 46999999987643 468999999998754 43 34799999 68999999995 355566776 7
Q ss_pred CceEEEEEEe
Q psy9829 164 NCISAQIKRT 173 (333)
Q Consensus 164 ~~v~L~v~R~ 173 (333)
..+.|.|+|.
T Consensus 89 ~~v~l~v~r~ 98 (104)
T 1wi2_A 89 REISMRVRFF 98 (104)
T ss_dssp SSEEEEEECC
T ss_pred CEEEEEEEEC
Confidence 8899999873
No 279
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.10 E-value=2e-06 Score=67.64 Aligned_cols=57 Identities=21% Similarity=0.377 Sum_probs=48.9
Q ss_pred eEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhc--CCceEEEEeccCC
Q psy9829 221 KIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS--KEKLSLTIRREVP 284 (333)
Q Consensus 221 ~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s--~~~v~L~V~R~~~ 284 (333)
|++|..|.++ ++|++ | |++||+|++|||+.+.+ ..+...+|+.. .+.+.|+|.|+..
T Consensus 2 Gv~V~~V~~~---spA~~-G-L~~GD~I~~InG~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~ 60 (91)
T 2kjp_A 2 GIYASSVVEN---MPAKG-K-IEVGDKIISADGKNYQS--AEKLIDYISSKKAGDKVTLKIEREEK 60 (91)
T ss_dssp CSSCCCCCCS---SCCSS-C-CCSSCEEEEETTBCCSS--HHHHHHHHSSCCSSCEECEEEESSSC
T ss_pred ceEEEEECCC---ChHHH-c-CCCCCEEEEECCEECCC--HHHHHHHHHcCCCCCEEEEEEEECCE
Confidence 4778999999 88887 5 99999999999988764 57888999876 6789999999864
No 280
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.10 E-value=2.8e-06 Score=66.24 Aligned_cols=71 Identities=11% Similarity=0.092 Sum_probs=54.6
Q ss_pred ccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhc
Q psy9829 86 VGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIA 162 (333)
Q Consensus 86 ~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~ 162 (333)
...+|||.+.||.+. +.+++|++|.|||.| +. .+|++||+ +.||+..+.+.. .....++..
T Consensus 16 ~~~~~G~~l~gg~~~------~~~v~V~~V~~~spA---------~~-aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 79 (94)
T 2eeg_A 16 GPSPWGFRLVGGRDF------SAPLTISRVHAGSKA---------AL-AALCPGDLIQAINGESTELMTHLEAQNRIKGC 79 (94)
T ss_dssp CSSCCSCCEECCTTT------TSCCEECCCCSSSHH---------HH-TTCCTTCEEEEETTEETTTCCHHHHHHHHHTC
T ss_pred CCCccCEEEECccCC------CCCEEEEEECCCCHH---------HH-cCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 346899999998864 457899999998755 32 24799999 589999998873 334455567
Q ss_pred CCceEEEEEE
Q psy9829 163 HNCISAQIKR 172 (333)
Q Consensus 163 g~~v~L~v~R 172 (333)
+..+.|.|.|
T Consensus 80 g~~v~l~v~R 89 (94)
T 2eeg_A 80 HDHLTLSVSS 89 (94)
T ss_dssp CSCEEEEEEC
T ss_pred CCeEEEEEEe
Confidence 7889999977
No 281
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.10 E-value=5.7e-06 Score=68.23 Aligned_cols=67 Identities=12% Similarity=0.054 Sum_probs=52.1
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhc-
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIA- 162 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~- 162 (333)
..||||+|.++. .+.+|.+|.++ + .+.+|++||+ +.||+.+|.+++ +++++|+.+
T Consensus 22 ~~G~GFsI~~~~---------~g~~V~~I~~~-----------~-~~aGL~~GD~Il~VNG~~v~~~~h~evv~~lk~~~ 80 (113)
T 3soe_A 22 PKGFGFAIADSP---------TGQKVKMILDS-----------Q-WCQGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQFP 80 (113)
T ss_dssp TTBSSEEEEEET---------TEEEEEEESCG-----------G-GSTTCCTTCEEEEETTEECTTSCHHHHHHHHHHSC
T ss_pred CCcccEEEeCCC---------CCcEEEEecCh-----------H-HhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 569999996542 25789999882 1 2356799999 689999999996 678888875
Q ss_pred -CCceEEEEEEee
Q psy9829 163 -HNCISAQIKRTH 174 (333)
Q Consensus 163 -g~~v~L~v~R~~ 174 (333)
+..++|.|+|..
T Consensus 81 ~G~~v~L~V~R~g 93 (113)
T 3soe_A 81 VGADVPLLILRGG 93 (113)
T ss_dssp TTCEEEEEEEESS
T ss_pred CCCEEEEEEEECC
Confidence 668999999843
No 282
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=98.10 E-value=2.7e-06 Score=66.66 Aligned_cols=76 Identities=12% Similarity=0.017 Sum_probs=53.7
Q ss_pred cceeeEEEec-ccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCc--chhhhhhhhc
Q psy9829 87 GSTFVGSVLG-ARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGV--VGSWQVFRIA 162 (333)
Q Consensus 87 G~~~g~~i~g-g~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv--~~a~~alr~~ 162 (333)
+.+|||+|.| |.+...-...+.+++|++|.+||.| +.. +|++||+ +.+|+..+++. .....+++..
T Consensus 15 ~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA---------~~a-GL~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 84 (96)
T 2ego_A 15 NQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPA---------QLA-GLTPGDTIASVNGLNVEGIRHREIVDIIKAS 84 (96)
T ss_dssp TCCCSEEEEEEEC-------CCEEEEEEEECTTCHH---------HHT-TCCTTCEEEEETTEECTTCCHHHHHHHHHHT
T ss_pred CCCccEEEEeccccccCCCCCCCCeEEEEECCCChH---------HHc-CCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 4699999998 4332211113569999999997754 443 3799999 58999999996 3556677777
Q ss_pred CCceEEEEEE
Q psy9829 163 HNCISAQIKR 172 (333)
Q Consensus 163 g~~v~L~v~R 172 (333)
+..++|.|.|
T Consensus 85 ~~~v~l~v~~ 94 (96)
T 2ego_A 85 GNVLRLETLY 94 (96)
T ss_dssp TTEEEEEEEC
T ss_pred CCeEEEEEEE
Confidence 7788888865
No 283
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.09 E-value=2.8e-06 Score=69.02 Aligned_cols=72 Identities=11% Similarity=0.030 Sum_probs=55.4
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
..||||.+.++.+ +.+++|++|.|||.| +..+.|++||+ +.||+..+.+.. .++.+++..+
T Consensus 24 ~~glG~~l~~~~~-------~~gv~V~~V~~~spA---------~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 87 (119)
T 1tp5_A 24 STGLGFNIVGGED-------GEGIFISFILAGGPA---------DLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAG 87 (119)
T ss_dssp TSCCCEEEEECGG-------GCCEEEEEECTTSHH---------HHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTSC
T ss_pred CCCccEEEecCCC-------CCCEEEEEECCCCHH---------HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 4689999998764 368999999998755 43223799999 589999999885 3444556678
Q ss_pred CceEEEEEEee
Q psy9829 164 NCISAQIKRTH 174 (333)
Q Consensus 164 ~~v~L~v~R~~ 174 (333)
..+.|.|.|+.
T Consensus 88 ~~v~l~v~r~~ 98 (119)
T 1tp5_A 88 QTVTIIAQYKP 98 (119)
T ss_dssp SEEEEEEEECH
T ss_pred CeEEEEEEECC
Confidence 88999998844
No 284
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.09 E-value=1.1e-06 Score=86.24 Aligned_cols=62 Identities=19% Similarity=0.355 Sum_probs=56.3
Q ss_pred eEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC--CceEEEEeccCCC
Q psy9829 221 KIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSK--EKLSLTIRREVPR 285 (333)
Q Consensus 221 ~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~--~~v~L~V~R~~~~ 285 (333)
++||.+|.++ ++|++.|+|++||+|++|||+++.+++|.++..+|+..+ ..+.|+|.|+...
T Consensus 233 g~~V~~V~~g---spA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~~~v~l~v~r~~~~ 296 (388)
T 3suz_A 233 TVILANMMNG---GPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLNIVSCPPV 296 (388)
T ss_dssp CCBCCCCCCS---SHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCTTCSCEEEEEEECCSC
T ss_pred CEEEEeeCCC---CHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhccCCCcccccccccccc
Confidence 5899999999 999999999999999999999999999999999999864 4599999987543
No 285
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.08 E-value=1.7e-06 Score=67.55 Aligned_cols=73 Identities=11% Similarity=0.145 Sum_probs=57.3
Q ss_pred cccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCc--chhhhhhhh
Q psy9829 85 PVGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGV--VGSWQVFRI 161 (333)
Q Consensus 85 E~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv--~~a~~alr~ 161 (333)
....+|||.+.+|.+. +.+++|++|.|||. |+. .+|++||+ +.+|+..++++ .....+++.
T Consensus 13 ~~~~~lG~~l~~g~~~------~~g~~V~~V~~~sp---------A~~-aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~ 76 (94)
T 1vb7_A 13 AGPAPWGFRISGGRDF------HTPIIVTKVTERGK---------AEA-ADLRPGDIIVAINGQSAENMLHAEAQSKIRQ 76 (94)
T ss_dssp CSSSCCSBCCEEETTT------TEEEECCCBCTTSS---------HHH-HTCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred cCCCCccEEEecccCC------CCCeEEEEECCCCH---------HHH-CCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 4456899999998762 46899999999764 453 45899999 58999999998 455566776
Q ss_pred cCCceEEEEEEe
Q psy9829 162 AHNCISAQIKRT 173 (333)
Q Consensus 162 ~g~~v~L~v~R~ 173 (333)
.+..+.|.|.|.
T Consensus 77 ~~~~v~l~v~R~ 88 (94)
T 1vb7_A 77 SASPLRLQLDRS 88 (94)
T ss_dssp CCSSEEEEEECC
T ss_pred CCCcEEEEEEEC
Confidence 668899999884
No 286
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=97.35 E-value=4.6e-07 Score=73.91 Aligned_cols=72 Identities=11% Similarity=0.054 Sum_probs=54.4
Q ss_pred cccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhh
Q psy9829 85 PVGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRI 161 (333)
Q Consensus 85 E~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~ 161 (333)
..+.+|||.+.||.+. +.+++|++|.||| ||+...+|++||+ +.||+.++.+.+ ....+++.
T Consensus 36 ~~~~glG~~l~~g~~~------~~gv~V~~V~~~s---------pA~~~aGL~~GD~Il~ING~~v~~~~~~~~~~~l~~ 100 (112)
T 2lob_A 36 EDHEGLGISITGGKEH------GVPILISEIHPGQ---------PADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQ 100 (112)
Confidence 3457999999998763 3579999999976 4554345799999 589999997753 55566776
Q ss_pred cCCceEEEEE
Q psy9829 162 AHNCISAQIK 171 (333)
Q Consensus 162 ~g~~v~L~v~ 171 (333)
.+..++|.|.
T Consensus 101 ~~~~v~l~V~ 110 (112)
T 2lob_A 101 QRGEIEFEVV 110 (112)
Confidence 7777877764
No 287
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=98.07 E-value=2.9e-06 Score=66.21 Aligned_cols=73 Identities=15% Similarity=0.119 Sum_probs=56.1
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCc--chhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGV--VGSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv--~~a~~alr~~g 163 (333)
..+|||.+.+..+.+ .+.+++|++|.|||.| +.. +|++||+ +.+|+..+.+. .....+++..+
T Consensus 13 ~~~~G~~l~~~~~~~----~~~g~~V~~V~~~spA---------~~a-Gl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g 78 (96)
T 2v90_A 13 PQGFGFLLREEKGLD----GRPGQFLWEVDPGLPA---------KKA-GMQAGDRLVAVAGESVEGLGHEETVSRIQGQG 78 (96)
T ss_dssp TTBSCEEEEEEECTT----SCEEEEEEEECTTSHH---------HHT-TCCTTEEEEEETTEECTTCCHHHHHHHHHTTT
T ss_pred CCcccEEEEeccCCC----CCCCeEEEEECCCChH---------HHc-CCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 459999999865432 3579999999997754 443 3799999 58999999995 35556676678
Q ss_pred CceEEEEEEe
Q psy9829 164 NCISAQIKRT 173 (333)
Q Consensus 164 ~~v~L~v~R~ 173 (333)
..+.|.|.|.
T Consensus 79 ~~v~l~v~r~ 88 (96)
T 2v90_A 79 SCVSLTVVDP 88 (96)
T ss_dssp TEEEEEEECC
T ss_pred CEEEEEEECC
Confidence 8899999873
No 288
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.07 E-value=7.8e-06 Score=70.12 Aligned_cols=59 Identities=32% Similarity=0.444 Sum_probs=51.7
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCC-ceEEEEecc
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKE-KLSLTIRRE 282 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~-~v~L~V~R~ 282 (333)
.++||.++.++ ++|++.| |++||+|++|||+.+.+++++.+..+++...+ .+.|+|.|.
T Consensus 27 ~g~~V~~v~~~---spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~~v~l~vr~~ 86 (166)
T 1w9e_A 27 NGIFVQLVQAN---SPASLVG-LRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITMTIRDR 86 (166)
T ss_dssp TEEEEEEECTT---SHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEEECC
T ss_pred CCEEEEEECCC---ChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEcC
Confidence 57999999999 8888776 99999999999999999999888899987654 899999443
No 289
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=98.06 E-value=3.3e-06 Score=65.73 Aligned_cols=62 Identities=8% Similarity=-0.047 Sum_probs=50.3
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
..+|||++.+| +|++|.+||. |+.. +|++||+ +.||+.+|.+.+ .+++.||.++
T Consensus 15 ~g~~Gf~i~~g-------------~I~~v~~gsp---------A~~a-Gl~~GD~Il~VNG~~v~~~~~~evv~llr~~g 71 (82)
T 1r6j_A 15 TGHVGFIFKNG-------------KITSIVKDSS---------AARN-GLLTEHNICEINGQNVIGLKDSQIADILSTSG 71 (82)
T ss_dssp TSCCCEEEETT-------------EEEEECTTSH---------HHHH-TCCSSEEEEEETTEECTTCCHHHHHHHHHHSC
T ss_pred CCCeEEEEECC-------------EEEEecCCCH---------HHHc-CCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Confidence 34799999865 3899999764 5554 3799999 689999999986 6677889899
Q ss_pred CceEEEEE
Q psy9829 164 NCISAQIK 171 (333)
Q Consensus 164 ~~v~L~v~ 171 (333)
..|+|.|.
T Consensus 72 ~~V~L~v~ 79 (82)
T 1r6j_A 72 TVVTITIM 79 (82)
T ss_dssp SEEEEEEE
T ss_pred CEEEEEEE
Confidence 99999885
No 290
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.05 E-value=6e-06 Score=64.93 Aligned_cols=58 Identities=19% Similarity=0.383 Sum_probs=49.4
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhc--CCceEEEEeccCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS--KEKLSLTIRREVP 284 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s--~~~v~L~V~R~~~ 284 (333)
.+++|.+|.++ ++|++ | |++||+|++|||+...+ ..+...+|+.. .+.+.|.|.|+..
T Consensus 5 ~Gv~V~~V~~~---spA~~-G-L~~GD~Il~InG~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~ 64 (94)
T 2kl1_A 5 KGVYVMSVLPN---MPAAG-R-LEAGDRIAAIDGQPINT--SEQIVSYVREKQAGDRVRVTFIRDRK 64 (94)
T ss_dssp CCEECCCCCTT---STTBT-T-BCTTCEEEEETTBCCCC--HHHHHHHHHHSCTTCCEEEEEEETTE
T ss_pred CcEEEEEECCC---ChHHh-C-CCCCCEEEEECCEECCC--HHHHHHHHHhCCCCCEEEEEEEECCE
Confidence 46899999999 88887 5 99999999999988765 57888888875 6799999999753
No 291
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.04 E-value=2e-06 Score=68.12 Aligned_cols=72 Identities=13% Similarity=0.137 Sum_probs=55.5
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCc-chhhhhhhhcCC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGV-VGSWQVFRIAHN 164 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv-~~a~~alr~~g~ 164 (333)
..+|||.+.||.+.+ .+++|++|.|||.| +...+|++||+ +.+|+..+.+. ...+.+++..+.
T Consensus 20 ~~~~G~~~~gg~~~~------~~v~V~~V~~~spA---------~~agGL~~GD~I~~ing~~v~~~~~~~~~~~~~~~~ 84 (100)
T 2edp_A 20 GAPWGFTLKGGLEHC------EPLTVSKIEDGGKA---------ALSQKMRTGDELVNINGTPLYGSRQEALILIKGSFR 84 (100)
T ss_dssp CSCCCCCEEEEGGGT------EEEEECCCCTTSHH---------HHHTSCCTTCEEEEETTEECCSCSHHHHHHHHTCCS
T ss_pred CCCcCEEEeccCCCC------CCeEEEEECCCCHH---------HHcCCCCCCCEEEEECCEEccchHHHHHHHHHhCCC
Confidence 458999999987643 47999999997754 43325799999 58999999885 334556666778
Q ss_pred ceEEEEEEe
Q psy9829 165 CISAQIKRT 173 (333)
Q Consensus 165 ~v~L~v~R~ 173 (333)
.+.|.|.|.
T Consensus 85 ~v~l~v~R~ 93 (100)
T 2edp_A 85 ILKLIVRRR 93 (100)
T ss_dssp SCEEEEEEC
T ss_pred eEEEEEEeC
Confidence 899999884
No 292
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.04 E-value=4.3e-06 Score=65.59 Aligned_cols=80 Identities=20% Similarity=0.191 Sum_probs=58.1
Q ss_pred cccccceeeEEEecccCCCCCC-CCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhh
Q psy9829 83 LFPVGSTFVGSVLGARGALDLA-NYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQV 158 (333)
Q Consensus 83 ~qE~G~~~g~~i~gg~d~p~~~-~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~a 158 (333)
+...+.+|||.+.++.+.+.-. ....+++|++|.|||.| +.. +|++||+ +.+|+..+.+.+ ..+.+
T Consensus 8 l~~~~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA---------~~a-Gl~~GD~I~~ing~~v~~~~~~~~~~~ 77 (99)
T 3khf_A 8 IHSSGKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPA---------QEA-GLRAGDLITHINGESVLGLVHMDVVEL 77 (99)
T ss_dssp EEC-CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHH---------HHH-TCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred EEeCCCCCcEEEEecccccCccccccCCeEEEEECCCCHH---------HHc-CCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3445779999999887543210 01247899999997754 433 3799999 589999999764 55667
Q ss_pred hhhcCCceEEEEEE
Q psy9829 159 FRIAHNCISAQIKR 172 (333)
Q Consensus 159 lr~~g~~v~L~v~R 172 (333)
++..+..+.|.|.|
T Consensus 78 l~~~g~~v~l~v~r 91 (99)
T 3khf_A 78 LLKSGNKISLRTTA 91 (99)
T ss_dssp HHHSCSEEEEEEEC
T ss_pred HhcCCCEEEEEEEE
Confidence 77788899999987
No 293
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.03 E-value=2e-06 Score=68.30 Aligned_cols=72 Identities=13% Similarity=0.176 Sum_probs=56.1
Q ss_pred ccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhc
Q psy9829 86 VGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIA 162 (333)
Q Consensus 86 ~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~ 162 (333)
...+|||.+.||.+. +.+++|++|.|||.| +.. +|++||+ +.+|+..+.++. ....+++..
T Consensus 13 ~~~~~G~~l~gg~~~------~~~v~V~~V~~~spA---------~~a-GL~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 76 (103)
T 1wf7_A 13 GPAPWGFRLQGGKDF------NMPLTISSLKDGGKA---------SQA-HVRIGDVVLSIDGISAQGMTHLEAQNKIKAC 76 (103)
T ss_dssp SSSCCSCCEEEETTT------TEEEEECCCCTTCHH---------HHT-TCCTTCBEEEETTEECSSCCHHHHHHHHHHC
T ss_pred CCCccCEEEeccccC------CCCEEEEEECCCCHH---------HHc-CCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 457899999999863 356999999998765 332 3799999 589999999873 444566667
Q ss_pred CCceEEEEEEe
Q psy9829 163 HNCISAQIKRT 173 (333)
Q Consensus 163 g~~v~L~v~R~ 173 (333)
+..+.|.|.|.
T Consensus 77 g~~v~l~v~R~ 87 (103)
T 1wf7_A 77 TGSLNMTLQRA 87 (103)
T ss_dssp SSEEEEEECCC
T ss_pred CCeEEEEEEeC
Confidence 88899999873
No 294
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.03 E-value=8.3e-06 Score=66.15 Aligned_cols=58 Identities=19% Similarity=0.245 Sum_probs=50.1
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhc---CCceEEEEec
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS---KEKLSLTIRR 281 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s---~~~v~L~V~R 281 (333)
.+..|..+.++ ++|++- .|++||+|++|||+.....+++|....|+.+ +..|.|.|+-
T Consensus 39 ~~~~I~~V~~g---SpA~~A-GL~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v~LLV~~ 99 (101)
T 3qik_A 39 KAVVVKSVQRG---SLAEVA-GLQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRPLRLLVAT 99 (101)
T ss_dssp TEEEEEEECTT---SHHHHH-TCCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCeEEEEECCC---CHHHHc-CCCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeEEEEEec
Confidence 36789999999 766554 5999999999999999999999999999974 8889998863
No 295
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.03 E-value=4.4e-06 Score=65.70 Aligned_cols=66 Identities=11% Similarity=0.140 Sum_probs=51.7
Q ss_pred ceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcCC
Q psy9829 88 STFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAHN 164 (333)
Q Consensus 88 ~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g~ 164 (333)
.+|||.+.| +.+++|++|.||| ||+ .+|++||+ +.||+..+.+.+ .++..++..+.
T Consensus 21 ~~~G~~l~~----------~~~~~V~~V~~~s---------pA~--agL~~GD~Il~ing~~v~~~~~~~~~~~~~~~g~ 79 (96)
T 2edv_A 21 QDYGFHISE----------SLPLTVVAVTAGG---------SAH--GKLFPGDQILQMNNEPAEDLSWERAVDILREAED 79 (96)
T ss_dssp CSCSBCCCS----------SSSCBCCCBCSSS---------SST--TTSCTTCBEEEESSCBSTTCCHHHHHHHHHHCSS
T ss_pred CcccEEEec----------CCCeEEEEECCCC---------chh--hCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 378888875 3579999999965 564 56799999 689999998874 34456666788
Q ss_pred ceEEEEEEee
Q psy9829 165 CISAQIKRTH 174 (333)
Q Consensus 165 ~v~L~v~R~~ 174 (333)
.++|.|.|..
T Consensus 80 ~v~l~v~R~~ 89 (96)
T 2edv_A 80 SLSITVVRCT 89 (96)
T ss_dssp CEEEEEEECC
T ss_pred eEEEEEEECC
Confidence 9999998844
No 296
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.02 E-value=2.8e-06 Score=75.04 Aligned_cols=70 Identities=11% Similarity=0.047 Sum_probs=56.1
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
+.||||.+.||.+. +.++||++|.|||.| +..+ |++||+ +.||+..+.+++ ..+.+++. +
T Consensus 95 ~~~lG~~i~~~~~~------~~~~~V~~V~~gspA---------~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~l~~-~ 157 (192)
T 3k1r_A 95 PEGLGLSVRGGLEF------GCGLFISHLIKGGQA---------DSVG-LQVGDEIVRINGYSISSCTHEEVINLIRT-E 157 (192)
T ss_dssp TTCCCEEEEEEGGG------TEEEEEEEECTTSHH---------HHTT-CCTTEEEEEETTEECTTCCHHHHHHHHTS-S
T ss_pred CCceeEEEEccccc------CCCEEEEEECCCChH---------HHcC-CCCCCEEEEECCEECCCCCHHHHHHHHcC-C
Confidence 57999999998752 468999999998755 4333 799999 689999999964 55566666 8
Q ss_pred CceEEEEEEe
Q psy9829 164 NCISAQIKRT 173 (333)
Q Consensus 164 ~~v~L~v~R~ 173 (333)
..+.|.|+|.
T Consensus 158 ~~v~l~v~r~ 167 (192)
T 3k1r_A 158 KTVSIKVRHI 167 (192)
T ss_dssp SEEEEEEEEC
T ss_pred CeEEEEEEEC
Confidence 8899999884
No 297
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes}
Probab=98.02 E-value=1.2e-06 Score=77.58 Aligned_cols=80 Identities=14% Similarity=0.044 Sum_probs=61.0
Q ss_pred CCCCCCCeeehHHHHHHHHcCCEEEEecCccccccccccccccEEEEEecCchhhHH-hhhcCCCcchhhHHHHHhhccc
Q psy9829 6 DSKKCSGIIRLSAIRDMMDRGRHGLLDITPNAVDRLNYAQFYPIVIFLRAETKSNVK-ELRAGIPKYHTNLARQRSRVLF 84 (333)
Q Consensus 6 ~~~~~~~~tsl~sVr~V~e~gkhCILDv~~~avk~L~~~~l~PivIfIkp~s~~~lk-~lr~~~~Es~~ki~~raer~~q 84 (333)
....+.+.|+.+++++++++|++||||++.++...++.....|.+||+.|||.+.++ +++.|.+++.+.+..|.++...
T Consensus 79 ~~~~~~yg~~~~~i~~~l~~g~~vild~~~~g~~~~~~~~~~~~~i~i~~ps~~~l~~Rl~~R~~~~~e~i~~Rl~~~~~ 158 (208)
T 3tau_A 79 EYVGNYYGTPLEYVEEKLAAGVDIFLEIEVQGAMQVRKAMPEGIFIFLTPPDLSELKNRIIGRGTESMEVVEERMETAKK 158 (208)
T ss_dssp EETTEEEEEEHHHHHHHHHTTCCEEEECCHHHHHHHHHHCTTSEEEEEECTTTTTSSCC-------CCHHHHHHHHHHHH
T ss_pred EEccccCCCcHHHHHHHHHcCCeEEEEeeHHHHHHHHHhCCCeEEEEEeCCCHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 344567889999999999999999999999999999888888999999999987766 6777776766777777766654
Q ss_pred c
Q psy9829 85 P 85 (333)
Q Consensus 85 E 85 (333)
|
T Consensus 159 e 159 (208)
T 3tau_A 159 E 159 (208)
T ss_dssp H
T ss_pred H
Confidence 4
No 298
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=98.00 E-value=4.9e-06 Score=64.60 Aligned_cols=71 Identities=8% Similarity=0.048 Sum_probs=53.8
Q ss_pred ccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCc--chhhhhhhhc
Q psy9829 86 VGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGV--VGSWQVFRIA 162 (333)
Q Consensus 86 ~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv--~~a~~alr~~ 162 (333)
.+.+|||.+.++.+. .+++|+.|.|||.| +.. +|++||+ +.||++++++. .....+++..
T Consensus 14 ~~~~~G~~l~~~~~~-------~~~~V~~v~~~spA---------~~a-Gl~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 76 (95)
T 3r68_A 14 GSNGYGFYLRAGPEQ-------KGQIIKDIEPGSPA---------EAA-GLKNNDLVVAVNGKSVEALDHDGVVEMIRKG 76 (95)
T ss_dssp BTTBCSCEEEEC--C-------CSEEEECCCTTSHH---------HHH-TCCTTEEEEEETTEECTTCCHHHHHHHHHTT
T ss_pred CCCcccEEEEecCCC-------CCEEEEEECCCCHH---------HHC-CCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 356899999875443 58999999997754 443 3799999 68999999998 4566777777
Q ss_pred CCceEEEEEEe
Q psy9829 163 HNCISAQIKRT 173 (333)
Q Consensus 163 g~~v~L~v~R~ 173 (333)
+..+.+.+.|+
T Consensus 77 ~~~~~~~~~r~ 87 (95)
T 3r68_A 77 GDQTTLLVLDK 87 (95)
T ss_dssp TTEEEEEEEEC
T ss_pred CCeEEEEEECC
Confidence 88888777664
No 299
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=97.98 E-value=6.7e-06 Score=62.42 Aligned_cols=66 Identities=12% Similarity=0.063 Sum_probs=50.6
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCc--chhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGV--VGSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv--~~a~~alr~~g 163 (333)
..||||.+.++ .+++|++|.+||.| +.. +|++||+ +.+|+..+++. .....+++..+
T Consensus 12 ~~g~G~~~~~~----------~~~~V~~V~~~spA---------~~a-Gl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 71 (83)
T 2kv8_A 12 RAGYGFTLSGQ----------APCVLSCVMRGSPA---------DFV-GLRAGDQILAVNEINVKKASHEDVVKLIGKCS 71 (83)
T ss_dssp SSCCSCBCCCS----------SSCBCCBCCTTSTT---------TTT-TCCTTCEEEEETTEECSSCCHHHHHHHHTTCS
T ss_pred CCcccEEEEcC----------CCeEEEEeCCCChH---------HHc-CCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 35788887652 36999999997754 443 3799999 58999999998 35556666677
Q ss_pred CceEEEEEE
Q psy9829 164 NCISAQIKR 172 (333)
Q Consensus 164 ~~v~L~v~R 172 (333)
..++|.|.|
T Consensus 72 ~~v~l~v~R 80 (83)
T 2kv8_A 72 GVLHMVIAE 80 (83)
T ss_dssp SCEEEEEEC
T ss_pred CeEEEEEEc
Confidence 789999987
No 300
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=97.97 E-value=5.9e-06 Score=65.92 Aligned_cols=72 Identities=11% Similarity=-0.005 Sum_probs=54.5
Q ss_pred ccccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCc--chhhhhhh
Q psy9829 84 FPVGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGV--VGSWQVFR 160 (333)
Q Consensus 84 qE~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv--~~a~~alr 160 (333)
...+.+|||.+.+.. +.+++|++|.|||.| +..++|++||+ +.||+.++.++ .....+++
T Consensus 20 K~~~~~lG~~l~~~~--------~~gv~V~~V~~gspA---------~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~ 82 (97)
T 2ejy_A 20 KVTEEPMGICLKLNE--------KQSCTVARILHGGMI---------HRQGSLHVGDEILEINGTNVTNHSVDQLQKAMK 82 (97)
T ss_dssp ECSSSCCSEEEEECT--------TCCEEEEEECSSSHH---------HHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHH
T ss_pred eCCCCCeeEEEEeCC--------CCCEEEEEeCCCCHH---------HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 344678999998532 368999999997754 54334799999 58999999984 46667777
Q ss_pred hcCCceEEEEEE
Q psy9829 161 IAHNCISAQIKR 172 (333)
Q Consensus 161 ~~g~~v~L~v~R 172 (333)
..+..++|.|.+
T Consensus 83 ~~~~~v~L~V~~ 94 (97)
T 2ejy_A 83 ETKGMISLKVIP 94 (97)
T ss_dssp HCCEEEEEEEEC
T ss_pred cCCCeEEEEEEE
Confidence 777788888864
No 301
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=97.97 E-value=1.8e-05 Score=60.61 Aligned_cols=68 Identities=10% Similarity=0.114 Sum_probs=50.1
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhh--
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRI-- 161 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~-- 161 (333)
..||||.+.++. ++.+++|+.+ +|| ||+ .+|++||+ +.||+..+++.+ ..+.+++.
T Consensus 13 ~~g~G~~~~~~~-------~~~~~~v~~v-~~s---------pA~--aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 73 (88)
T 3bpu_A 13 PMGFGFTIADSP-------GGGGQRVKQI-VDS---------PRS--RGLKEGDLIVEVNKKNVQALTHNQVVDMLVESP 73 (88)
T ss_dssp TTBSSCEEEECT-------TSSSEEEEEC-CC-----------CC--TTCCTTCEEEEETTEECTTSCHHHHHHHHHTSC
T ss_pred CCceeEEEEecC-------CCCcEEEEEe-cCC---------hhH--hCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCC
Confidence 468999998653 2468999997 866 455 35899999 589999999873 45556664
Q ss_pred cCCceEEEEEEe
Q psy9829 162 AHNCISAQIKRT 173 (333)
Q Consensus 162 ~g~~v~L~v~R~ 173 (333)
.+..++|.|.|.
T Consensus 74 ~g~~v~l~v~R~ 85 (88)
T 3bpu_A 74 KGSEVTLLVQRQ 85 (88)
T ss_dssp TTCEEEEEEEEE
T ss_pred CCCEEEEEEEeC
Confidence 467899999874
No 302
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.95 E-value=3.4e-06 Score=67.57 Aligned_cols=71 Identities=10% Similarity=0.057 Sum_probs=54.3
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
..+|||.+.++.+ +.+++|++|.+||.| +..++|++||+ +.||++.+.+.+ ....+++..+
T Consensus 25 ~~glG~~l~~~~~-------~~gv~V~~V~~~s~A---------~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~~~ 88 (113)
T 1um7_A 25 STGLGFNIVGGED-------GEGIFVSFILAGGPA---------DLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAG 88 (113)
T ss_dssp SSCSSBCCBCCST-------TCCCBCCCBCSSSHH---------HHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHSCC
T ss_pred CCcccEEEEeccC-------CCCEEEEEECCCCHH---------HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 4689999998764 468999999998755 43223799999 689999999874 3344556678
Q ss_pred CceEEEEEEe
Q psy9829 164 NCISAQIKRT 173 (333)
Q Consensus 164 ~~v~L~v~R~ 173 (333)
..+.|.|.|.
T Consensus 89 ~~v~l~v~r~ 98 (113)
T 1um7_A 89 QSVTIVAQYR 98 (113)
T ss_dssp SEEEEEEECC
T ss_pred CcEEEEEEEC
Confidence 8899999874
No 303
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.94 E-value=4.8e-06 Score=64.95 Aligned_cols=70 Identities=11% Similarity=-0.013 Sum_probs=53.1
Q ss_pred cccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeec-cCcchhhhhhhhc
Q psy9829 85 PVGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLH-NGVVGSWQVFRIA 162 (333)
Q Consensus 85 E~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv-~gv~~a~~alr~~ 162 (333)
..+.+|||.+.+ .+.+++|++|.|||. |+....|++||+ +.||+..+ ........+++..
T Consensus 15 ~~~~~lG~~i~~---------~~~~v~V~~V~~~sp---------A~~ag~L~~GD~I~~ing~~v~~~~~~~~~~l~~~ 76 (91)
T 2e7k_A 15 TAGEHLGVTFRV---------EGGELVIARILHGGM---------VAQQGLLHVGDIIKEVNGQPVGSDPRALQELLRNA 76 (91)
T ss_dssp CTTCCCCEEEEE---------SSSSEEEEEECSSSH---------HHHHCCCCTTCEEEEETTEECTTCHHHHHHHHHTC
T ss_pred CCCCcEeEEEEe---------cCCCEEEEEECCCCH---------HHHcCCCCCCCEEEEECCEECCCCHHHHHHHHHcC
Confidence 346799999987 146899999999765 454334699999 68999999 3334556677777
Q ss_pred CCceEEEEEE
Q psy9829 163 HNCISAQIKR 172 (333)
Q Consensus 163 g~~v~L~v~R 172 (333)
+..+.|.|.|
T Consensus 77 ~~~v~l~v~~ 86 (91)
T 2e7k_A 77 SGSVILKILS 86 (91)
T ss_dssp CSSBCEEEEC
T ss_pred CCeEEEEEEE
Confidence 7788898876
No 304
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=97.93 E-value=9.4e-06 Score=64.40 Aligned_cols=71 Identities=10% Similarity=0.049 Sum_probs=55.3
Q ss_pred ccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhc
Q psy9829 86 VGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIA 162 (333)
Q Consensus 86 ~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~ 162 (333)
.+.+|||.+.++. ++.+++|++|.|||.| +.. +|++||+ +.||+..+.+.. ....+++..
T Consensus 11 ~~~~~G~~l~~~~-------~~~g~~V~~V~~~spA---------~~a-Gl~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 73 (106)
T 3ngh_A 11 EGQNYGFFLRIEK-------DTDGHLIRVIEEGSPA---------EKA-GLLDGDRVLRINGVFVDKEEHAQVVELVRKS 73 (106)
T ss_dssp TTCCCCCEEECCT-------TCCSCEEECCCTTSHH---------HHT-TCCTTCEEEEETTEECTTSCHHHHHHHHHHT
T ss_pred CCCeeCEEEEEEe-------CCCCEEEEEeCCCCHH---------HHc-CCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 3567888887653 3468999999997754 443 3799999 589999999986 566777778
Q ss_pred CCceEEEEEEe
Q psy9829 163 HNCISAQIKRT 173 (333)
Q Consensus 163 g~~v~L~v~R~ 173 (333)
+..++|.|.|.
T Consensus 74 g~~v~l~v~r~ 84 (106)
T 3ngh_A 74 GNSVTLLVLDG 84 (106)
T ss_dssp TTEEEEEEECH
T ss_pred CCEEEEEEEEC
Confidence 88999999873
No 305
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=97.93 E-value=1.4e-05 Score=61.89 Aligned_cols=69 Identities=9% Similarity=-0.004 Sum_probs=51.1
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
..||||.+.+. .+++|++|.+||.| +. .+|++||+ +.||+..+.+.+ ....+++..+
T Consensus 13 ~~g~G~~l~~~----------~~~~V~~V~~~spA---------~~-aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 72 (91)
T 2f5y_A 13 KDGFGFTICCD----------SPVRVQAVDSGGPA---------ER-AGLQQLDTVLQLNERPVEHWKCVELAHEIRSCP 72 (91)
T ss_dssp TTBTSEEEECS----------SSCEEEEECTTSHH---------HH-HTCCTTCEEEEETTEECTTCCHHHHHHHHHTCS
T ss_pred CCCccEEEecC----------CCEEEEEECCCCHH---------HH-cCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 35788888642 35899999998755 33 23799999 589999998863 4455666667
Q ss_pred CceEEEEEEeec
Q psy9829 164 NCISAQIKRTHF 175 (333)
Q Consensus 164 ~~v~L~v~R~~~ 175 (333)
..+.|.|.|..+
T Consensus 73 ~~v~l~v~R~~~ 84 (91)
T 2f5y_A 73 SEIILLVWRMVP 84 (91)
T ss_dssp SEEEEEEEECC-
T ss_pred CeEEEEEEeCCC
Confidence 789999988543
No 306
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.93 E-value=2.7e-06 Score=70.13 Aligned_cols=58 Identities=9% Similarity=0.005 Sum_probs=46.1
Q ss_pred CCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcCCceEEEEEEe
Q psy9829 106 YDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAHNCISAQIKRT 173 (333)
Q Consensus 106 ~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g~~v~L~v~R~ 173 (333)
.+.+++|++|.|||.| +.. +|++||+ +.||++++.+.+ ..+.+|+..+..++|.|.|.
T Consensus 59 ~~~gv~V~~V~~~spA---------~~a-GL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~ 119 (126)
T 2yuy_A 59 PMDTIFVKQVKEGGPA---------FEA-GLCTGDRIIKVNGESVIGKTYSQVIALIQNSDTTLELSVMPK 119 (126)
T ss_dssp CCCCCCBCCCCSSSHH---------HHH-TCCSSCCCCEETTEECSSCCHHHHHHHHHTCTTEEEEECCCC
T ss_pred CCCCEEEEEECCCChH---------HHc-CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEEC
Confidence 4678999999997754 433 3799999 699999998664 55667777788999999874
No 307
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=97.92 E-value=1.5e-05 Score=62.88 Aligned_cols=71 Identities=8% Similarity=0.050 Sum_probs=54.1
Q ss_pred ccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhc
Q psy9829 86 VGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIA 162 (333)
Q Consensus 86 ~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~ 162 (333)
...+|||.+.++. ++.+++|++|.+||. |+.. +|++||+ +.+|+..+.+.. ....+++..
T Consensus 15 ~~~g~G~~l~~~~-------~~~g~~V~~V~~~sp---------A~~a-Gl~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 77 (102)
T 2d90_A 15 GSNGYGFYLRAGP-------EQKGQIIKDIEPGSP---------AEAA-GLKNNDLVVAVNGKSVEALDHDGVVEMIRKG 77 (102)
T ss_dssp CSSSSSCEEEECS-------SSSSEEEECCCTTST---------TTTT-TCCTTCEEEEESSCBCTTSCHHHHHHHHHHS
T ss_pred CCCCccEEEEeec-------CCCCEEEEEECCCCH---------HHHc-CCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 3458999998743 246899999999764 4543 3799999 589999998874 445566667
Q ss_pred CCceEEEEEEe
Q psy9829 163 HNCISAQIKRT 173 (333)
Q Consensus 163 g~~v~L~v~R~ 173 (333)
+..+.|.|.|+
T Consensus 78 g~~v~l~v~r~ 88 (102)
T 2d90_A 78 GDQTTLLVLDK 88 (102)
T ss_dssp TTEEEEEECST
T ss_pred CCEEEEEEEEC
Confidence 88899999773
No 308
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.91 E-value=2.3e-06 Score=71.63 Aligned_cols=70 Identities=11% Similarity=0.025 Sum_probs=53.3
Q ss_pred ccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhh-
Q psy9829 86 VGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRI- 161 (333)
Q Consensus 86 ~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~- 161 (333)
...||||.+.+ .+.+++|++|.+||. |+..++|++||+ +.||+..+.+.+ ..+.+|+.
T Consensus 36 ~~~glG~~i~~---------~~~~v~V~~V~~gsp---------A~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~ 97 (126)
T 1wif_A 36 GNLGLGLVVIQ---------NGPYLQISHLINKGA---------AASDGILQPGDVLISVGHANVLGYTLREFLKLLQNI 97 (126)
T ss_dssp CTTCCCCCEEE---------ETTEEEECCCCTTSS---------GGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSC
T ss_pred CCceEeEEEEc---------CCCcEEEEEECCCCH---------HHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Confidence 35689999886 246899999999764 554444799999 689999997653 55667765
Q ss_pred -cCCceEEEEEEe
Q psy9829 162 -AHNCISAQIKRT 173 (333)
Q Consensus 162 -~g~~v~L~v~R~ 173 (333)
.+..++|.|.|.
T Consensus 98 ~~G~~v~l~V~R~ 110 (126)
T 1wif_A 98 TIGTVLQIKAYRG 110 (126)
T ss_dssp CSSCEEEEEEESS
T ss_pred CCCCEEEEEEEEC
Confidence 467799999884
No 309
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.90 E-value=3.4e-06 Score=67.00 Aligned_cols=75 Identities=13% Similarity=0.141 Sum_probs=57.6
Q ss_pred ccccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCc--chhhhhhh
Q psy9829 84 FPVGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGV--VGSWQVFR 160 (333)
Q Consensus 84 qE~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv--~~a~~alr 160 (333)
.....+|||.+.+|.|. +.+++|++|.|||. |+. .+|++||+ +.+|+..+.++ .....+++
T Consensus 11 ~~~~~~lG~~l~~g~~~------~~~~~V~~V~~~sp---------A~~-aGL~~GD~I~~ing~~v~~~~~~~~~~~l~ 74 (103)
T 1v5l_A 11 LPGPAPWGFRLSGGIDF------NQPLVITRITPGSK---------AAA-ANLCPGDVILAIDGFGTESMTHADAQDRIK 74 (103)
T ss_dssp EESSSCCSBCCEEETTT------TEEEECSCBCTTST---------TGG-GTCCTTCBEEEETTEECSSCCHHHHHHHHT
T ss_pred EcCCCCcCEEEeccccC------CCCeEEEEECCCCH---------HHH-cCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 34456899999988753 36899999999764 443 34799999 68999999994 45566777
Q ss_pred hcCCceEEEEEEee
Q psy9829 161 IAHNCISAQIKRTH 174 (333)
Q Consensus 161 ~~g~~v~L~v~R~~ 174 (333)
..+..++|.|.|..
T Consensus 75 ~~g~~v~l~v~R~g 88 (103)
T 1v5l_A 75 AASYQLCLKIDRAE 88 (103)
T ss_dssp TCCSEEECEECCCT
T ss_pred hCCCeEEEEEEECC
Confidence 67888999998843
No 310
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.90 E-value=1e-05 Score=65.47 Aligned_cols=67 Identities=10% Similarity=0.089 Sum_probs=52.7
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCcccc-ccCCE-EEEceeeccCcc--hhhhhhhhc
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSF-RKGDV-FHVIDTLHNGVV--GSWQVFRIA 162 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~l-r~gD~-I~Vnd~dv~gv~--~a~~alr~~ 162 (333)
+.+|||.+.++ +.+++|++|.+||.| +.. +| ++||+ +.||+..+.+.+ ..+.+|+..
T Consensus 36 ~~~lG~~i~~~---------~~gv~V~~V~~~spA---------~~a-Gll~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 96 (113)
T 1va8_A 36 DIPLGATVRNE---------MDSVIISRIVKGGAA---------EKS-GLLHEGDEVLEINGIEIRGKDVNEVFDLLSDM 96 (113)
T ss_dssp TCCCCEEEEEC---------SSSEEEEEECTTSHH---------HHH-TCCCTTCEEEEETTEECTTCCHHHHHHHHHHC
T ss_pred CCceeEEEEeC---------CCCEEEEEeCCCCHH---------HHc-CCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 45899999864 468999999997654 433 35 99999 589999999765 556677777
Q ss_pred CCceEEEEEE
Q psy9829 163 HNCISAQIKR 172 (333)
Q Consensus 163 g~~v~L~v~R 172 (333)
+..+.|.|.|
T Consensus 97 ~~~v~l~v~r 106 (113)
T 1va8_A 97 HGTLTFVLIP 106 (113)
T ss_dssp CEEEEEEEEC
T ss_pred CCeEEEEEEE
Confidence 7789999876
No 311
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=97.90 E-value=4.7e-06 Score=64.50 Aligned_cols=70 Identities=10% Similarity=0.007 Sum_probs=51.8
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
..+|||.+.++.+ ..+++|++|.|||.| +.. +|++||+ +.+|+..+++.+ ...++++..+
T Consensus 13 ~~~~G~~l~~~~~-------~~g~~V~~V~~~spA---------~~a-Gl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g 75 (91)
T 2vsp_A 13 ENGYGFHLNAIRG-------LPGSFIKEVQKGGPA---------DLA-GLEDEDVIIEVNGVNVLDEPYEKVVDRIQSSG 75 (91)
T ss_dssp TTBTSCCCBCCTT-------CSCCBC-CCCTTSHH---------HHT-TCCTTCEEEEETTEECTTSCHHHHHHHHTTSC
T ss_pred CCcccEEEEeccC-------CCCeEEEEECCCChH---------HHc-CCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 3489999987543 457899999997754 433 3799999 589999998553 5556676668
Q ss_pred CceEEEEEEe
Q psy9829 164 NCISAQIKRT 173 (333)
Q Consensus 164 ~~v~L~v~R~ 173 (333)
..++|.|.|.
T Consensus 76 ~~v~l~v~r~ 85 (91)
T 2vsp_A 76 KNVTLLVCGK 85 (91)
T ss_dssp SEEEEEEEC-
T ss_pred CEEEEEEEeC
Confidence 8899999874
No 312
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=97.89 E-value=3.1e-05 Score=62.27 Aligned_cols=73 Identities=12% Similarity=0.052 Sum_probs=54.5
Q ss_pred ccccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcch--hhhhhh
Q psy9829 84 FPVGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVVG--SWQVFR 160 (333)
Q Consensus 84 qE~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~~--a~~alr 160 (333)
.....+|||.+.++.+ .+.+++|++|.+||.| +.. +|++||+ +.||+..+.+... ...+++
T Consensus 23 ~~~~~~lG~~l~~~~~------~~~gv~V~~V~~~s~A---------~~a-GL~~GD~Il~vng~~v~~~~~~~~~~~~~ 86 (114)
T 1x5n_A 23 LVGSRGLGCSISSGPI------QKPGIFISHVKPGSLS---------AEV-GLEIGDQIVEVNGVDFSNLDHKEAVNVLK 86 (114)
T ss_dssp CCSSCCCCEEEEECCS------SSCSEEEEEECTTSTT---------TTT-TCCTTCEEEEETTEETTSCCTTHHHHHHH
T ss_pred EcCCCceeEEEeecCC------CCCCEEEEEECCCCHH---------HHc-CCCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 3446799999998854 2468999999997754 432 4799999 6899999999863 444555
Q ss_pred hcCCceEEEEEEe
Q psy9829 161 IAHNCISAQIKRT 173 (333)
Q Consensus 161 ~~g~~v~L~v~R~ 173 (333)
.. ..+.|.|.|.
T Consensus 87 ~~-~~v~l~v~r~ 98 (114)
T 1x5n_A 87 SS-RSLTISIVAA 98 (114)
T ss_dssp HC-SSEEEEECSS
T ss_pred cC-CeEEEEEEcC
Confidence 54 5788888763
No 313
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=97.86 E-value=4.5e-05 Score=59.30 Aligned_cols=67 Identities=15% Similarity=0.148 Sum_probs=50.2
Q ss_pred ccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcchh--hhhhhhc
Q psy9829 86 VGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVVGS--WQVFRIA 162 (333)
Q Consensus 86 ~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~~a--~~alr~~ 162 (333)
...+|||.+.+ +.+++|++|.||| ||+.. +|++||+ +.+|+..+.+.... +..++ .
T Consensus 17 ~~~~~G~~l~~----------~~g~~V~~V~~~s---------pA~~a-GL~~GD~I~~ing~~v~~~~~~~~~~~~~-~ 75 (93)
T 2dls_A 17 DQHGFGFTVSG----------DRIVLVQSVRPGG---------AAMKA-GVKEGDRIIKVNGTMVTNSSHLEVVKLIK-S 75 (93)
T ss_dssp SSSSCCEEEEC----------SSSCEEEEECSSS---------TTTTT-TCCSSCEEEEETTEECSSSCHHHHHHHHT-S
T ss_pred CCCceeEEEeC----------CCCEEEEEECCCC---------HHHHc-CCCCCCEEEEECCEECCCCCHHHHHHhhc-C
Confidence 35689999874 3579999999976 44543 3799999 58999999987522 23334 5
Q ss_pred CCceEEEEEEe
Q psy9829 163 HNCISAQIKRT 173 (333)
Q Consensus 163 g~~v~L~v~R~ 173 (333)
+..++|.|.|.
T Consensus 76 g~~v~l~v~R~ 86 (93)
T 2dls_A 76 GAYVALTLLGS 86 (93)
T ss_dssp SSEEEEEEECC
T ss_pred CCEEEEEEEEC
Confidence 78899999884
No 314
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=97.85 E-value=1.4e-05 Score=65.06 Aligned_cols=71 Identities=11% Similarity=-0.010 Sum_probs=52.3
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCc--chhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGV--VGSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv--~~a~~alr~~g 163 (333)
..+|||.+.+|.+. +++++|++|.|||.| +..++|++||+ +.||+..+.+. .....+++..+
T Consensus 35 ~~~lG~~l~~~~~~------~~~~~V~~V~~gspA---------~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~ 99 (114)
T 2gzv_A 35 QNLIGISIGGGAQY------CPCLYIVQVFDNTPA---------ALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 99 (114)
T ss_dssp TSCCSEEEEECCC--------CCEEEEEECTTSHH---------HHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred CCcEeEEEEeCCCC------CCCEEEEEECCCChH---------HHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 34699999987642 468999999998755 33223799999 58999999554 45556777777
Q ss_pred CceEEEEEE
Q psy9829 164 NCISAQIKR 172 (333)
Q Consensus 164 ~~v~L~v~R 172 (333)
..++|.|++
T Consensus 100 ~~v~l~v~~ 108 (114)
T 2gzv_A 100 GEVTIHYNK 108 (114)
T ss_dssp SEEEEEEEC
T ss_pred CeEEEEEEe
Confidence 778888865
No 315
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.84 E-value=7.5e-06 Score=65.00 Aligned_cols=71 Identities=6% Similarity=-0.081 Sum_probs=54.2
Q ss_pred ccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhc
Q psy9829 86 VGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIA 162 (333)
Q Consensus 86 ~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~ 162 (333)
.+.+|||.+.++. ++.++||++|.|||.| +.. +|++||+ +.||+.++.+.+ ....+++..
T Consensus 17 ~~~~~G~~l~~~~-------~~~g~~V~~V~~~spA---------~~a-Gl~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 79 (106)
T 2eei_A 17 EGGSYGFSLKTVQ-------GKKGVYMTDITPQGVA---------MRA-GVLADDHLIEVNGENVEDASHEEVVEKVKKS 79 (106)
T ss_dssp CSSSCSCCEECCS-------SCCSCEECCCCTTSHH---------HHH-TCCSSEEEEEETTEECTTCCHHHHHHHHHHH
T ss_pred CCCCCCEEEEecc-------CCCCEEEEEECCCCHH---------HHc-CCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 3668999998763 3578999999998755 332 3799999 689999998764 444566667
Q ss_pred CCceEEEEEEe
Q psy9829 163 HNCISAQIKRT 173 (333)
Q Consensus 163 g~~v~L~v~R~ 173 (333)
+..+.|.|.|.
T Consensus 80 ~~~v~l~v~r~ 90 (106)
T 2eei_A 80 GSRVMFLLVDK 90 (106)
T ss_dssp CSEEEEEECCT
T ss_pred CCeEEEEEEcC
Confidence 88899998774
No 316
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=97.83 E-value=3.3e-05 Score=61.98 Aligned_cols=57 Identities=19% Similarity=0.392 Sum_probs=48.9
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREV 283 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~ 283 (333)
.+++|.++.++ ++|++-| |++||+|++|||+.+. +.++...+|+. .+.+.|+|.|+.
T Consensus 35 ~gv~V~~V~~~---spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~-~~~v~l~v~R~g 91 (113)
T 2pzd_A 35 HGVLIHKVILG---SPAHRAG-LRPGDVILAIGEQMVQ--NAEDVYEAVRT-QSQLAVQIRRGR 91 (113)
T ss_dssp SCEEEEEEBTT---SHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHHHH-CSSEEEEEEETT
T ss_pred CCeEEEEeCCC---ChHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHhC-CCeEEEEEEECC
Confidence 57999999999 7776654 9999999999999876 57888888887 688999999875
No 317
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=97.82 E-value=3.4e-05 Score=62.21 Aligned_cols=68 Identities=10% Similarity=0.086 Sum_probs=51.0
Q ss_pred eeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCc--chhhhhhhhcCCc
Q psy9829 89 TFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGV--VGSWQVFRIAHNC 165 (333)
Q Consensus 89 ~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv--~~a~~alr~~g~~ 165 (333)
+|||.+.++. ++.+++|++|.||| ||+.. +|++||+ +.||+..+++. .....+++..+..
T Consensus 26 ~~G~~l~~~~-------~~~g~~V~~V~~~s---------pA~~a-GL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 88 (114)
T 2edz_A 26 NYGFFLRIEK-------DTDGHLIRVIEEGS---------PAEKA-GLLDGDRVLRINGVFVDKEEHAQVVELVRKSGNS 88 (114)
T ss_dssp CCSCEEECCT-------TCCSCEEECCCTTC---------TTGGG-TCCTTCEEEEESSSBCSSSCHHHHHHHHHHTCSE
T ss_pred cccEEEEEec-------CCCCeEEEEeCCCC---------hHHHc-CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCE
Confidence 4566666532 34689999999976 45543 3799999 58999999886 3455667777889
Q ss_pred eEEEEEEe
Q psy9829 166 ISAQIKRT 173 (333)
Q Consensus 166 v~L~v~R~ 173 (333)
++|.|.|.
T Consensus 89 v~l~v~R~ 96 (114)
T 2edz_A 89 VTLLVLDG 96 (114)
T ss_dssp EEEEEECH
T ss_pred EEEEEEEC
Confidence 99999883
No 318
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.81 E-value=1.7e-05 Score=62.52 Aligned_cols=70 Identities=16% Similarity=0.098 Sum_probs=52.3
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcchhhhhhhh--cC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVVGSWQVFRI--AH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~~a~~alr~--~g 163 (333)
..+|||.+.++.+. +.+++|++|.+||.| +.. +|++||+ +.||+..+.+... .+++.. .+
T Consensus 20 ~~~lG~~~~~~~~~------~~g~~V~~V~~~spA---------~~a-GL~~GD~I~~ing~~v~~~~~-~~~~~~~~~~ 82 (101)
T 1uez_A 20 HEGLGFSIRGGSEH------GVGIYVSLVEPGSLA---------EKE-GLRVGDQILRVNDKSLARVTH-AEAVKALKGS 82 (101)
T ss_dssp TTCSSEEEEECTTT------TCCEEEEEECTTSHH---------HHH-TCCSSCCEEEETTEECSSCCH-HHHHHHSSSS
T ss_pred CCcccEEEeCCCCC------CCCEEEEEECCCCHH---------HHc-CCCCCCEEEEECCEECCCcCH-HHHHHhhcCC
Confidence 46999999988752 368999999998754 432 3799999 6899999998864 334433 34
Q ss_pred CceEEEEEEe
Q psy9829 164 NCISAQIKRT 173 (333)
Q Consensus 164 ~~v~L~v~R~ 173 (333)
..+.|.|.|.
T Consensus 83 ~~v~l~v~R~ 92 (101)
T 1uez_A 83 KKLVLSVYSA 92 (101)
T ss_dssp SSCCEEECCC
T ss_pred CeEEEEEEEC
Confidence 5688988773
No 319
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=97.80 E-value=2e-05 Score=65.07 Aligned_cols=71 Identities=11% Similarity=0.062 Sum_probs=54.9
Q ss_pred cccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCc--chhhhhhhh
Q psy9829 85 PVGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGV--VGSWQVFRI 161 (333)
Q Consensus 85 E~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv--~~a~~alr~ 161 (333)
..+.+|||.+.+|. +.+++|+.|.|||.| +.. +|++||+ +.||++.+.++ .....+|+.
T Consensus 36 ~~~~~lG~~l~~~~--------~~gv~V~~V~~gspA---------~~a-GL~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 97 (124)
T 3tsv_A 36 RKGDSVGLRLAGGN--------DVGIFVAGVLEDSPA---------AKE-GLEEGDQILRVNNVDFTNIIREEAVLFLLD 97 (124)
T ss_dssp ECSSCCCEEEEECT--------TSCEEEEEECTTCHH---------HHT-TCCTTEEEEEETTEECSSCCHHHHHHHHHH
T ss_pred CCCCceeEEEecCC--------CCCEEEEEECCCCHH---------HHc-CCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 33679999999764 368999999998754 432 3799999 68999999998 455566664
Q ss_pred --cCCceEEEEEEe
Q psy9829 162 --AHNCISAQIKRT 173 (333)
Q Consensus 162 --~g~~v~L~v~R~ 173 (333)
.+..+.|.|.|.
T Consensus 98 ~~~g~~v~l~v~R~ 111 (124)
T 3tsv_A 98 LPKGEEVTILAQKK 111 (124)
T ss_dssp SCTTCEEEEEEEEC
T ss_pred cCCCCEEEEEEEEC
Confidence 677899999884
No 320
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=97.78 E-value=6.2e-05 Score=59.54 Aligned_cols=58 Identities=17% Similarity=0.306 Sum_probs=48.1
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhc--CCceEEEEeccCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS--KEKLSLTIRREVP 284 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s--~~~v~L~V~R~~~ 284 (333)
.+++|.++.++ ++|++ .|++||+|++|||+.+.+ .++...+|... .+.+.|+|.|+..
T Consensus 7 ~Gv~V~~V~~~---spA~~--GL~~GD~I~~Ing~~v~~--~~dl~~~l~~~~~g~~v~l~v~R~g~ 66 (100)
T 3i18_A 7 DGVYVMSVKDD---VPAAD--VLHAGDLITEIDGNAFKS--SQEFIDYIHSKKVGDTVKINYKHGDK 66 (100)
T ss_dssp CCEEEEEECTT---SGGGG--TCCTTCEEEEETTBCCSS--HHHHHHHHHTSCTTCEEEEEEEETTE
T ss_pred CCEEEEEeCCC---CchHH--CCCCCCEEEEECCEECCC--HHHHHHHHHhCCCCCEEEEEEEECCE
Confidence 47999999999 88874 699999999999987764 56778888764 5789999999753
No 321
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.77 E-value=2.2e-05 Score=64.41 Aligned_cols=74 Identities=12% Similarity=-0.000 Sum_probs=56.0
Q ss_pred ceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcchhhhhhhhc-CCc
Q psy9829 88 STFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVVGSWQVFRIA-HNC 165 (333)
Q Consensus 88 ~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~~a~~alr~~-g~~ 165 (333)
.+|||.+.+..+.+ .+.+++|++|.+||.| +..++|++||+ +.||+..+.+......+|+.. +..
T Consensus 32 ~~lG~~~~~~~~~~----~~~gv~V~~V~~~spA---------~~aG~l~~GD~I~~ing~~v~~~~~~~~~l~~~~g~~ 98 (124)
T 1wh1_A 32 DKLGLTVCYRTDDE----DDIGIYISEIDPNSIA---------AKDGRIREGDRIIQINGIEVQNREEAVALLTSEENKN 98 (124)
T ss_dssp CCCCEEEECCCCCS----SCCCEEEEEECSSSHH---------HHTCCCCTTCEEEEESSCBCCSHHHHHHHHTCSSCCS
T ss_pred CcccEEEEecCCCC----CCCCEEEEEECCCCHH---------HHcCCCCCCCEEEEECCEECCCHHHHHHHHHhCCCCE
Confidence 47999999876653 2579999999997754 44333799999 589999998876666677653 677
Q ss_pred eEEEEEEee
Q psy9829 166 ISAQIKRTH 174 (333)
Q Consensus 166 v~L~v~R~~ 174 (333)
+.|.|.|..
T Consensus 99 v~l~v~R~g 107 (124)
T 1wh1_A 99 FSLLIARPE 107 (124)
T ss_dssp CCEEEEECS
T ss_pred EEEEEEECC
Confidence 999998843
No 322
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=97.73 E-value=1.9e-05 Score=61.79 Aligned_cols=69 Identities=14% Similarity=0.085 Sum_probs=50.8
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCc--chhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGV--VGSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv--~~a~~alr~~g 163 (333)
..||||.+.++. +..+++|++|.|||.| +.. +|++||+ +.+|+..+.+. .....+++...
T Consensus 19 ~~g~G~~~~~~~-------~~~g~~V~~V~~~spA---------~~a-Gl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 81 (98)
T 2jxo_A 19 PSGYGFNLHSDK-------SKPGQFIRSVDPDSPA---------EAS-GLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGG 81 (98)
T ss_dssp TTCCCEEEECCC-------SSSCEEEEEECTTSHH---------HHH-TCCTTCEEEEETTEECTTCCHHHHHHHHHTTT
T ss_pred CCcccEEEEecC-------CCCCEEEEEECCCCHH---------HHc-CCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 468999998764 2458999999997754 433 3799999 58999999984 45556666654
Q ss_pred C-ceEEEEEE
Q psy9829 164 N-CISAQIKR 172 (333)
Q Consensus 164 ~-~v~L~v~R 172 (333)
. .+.|+|.|
T Consensus 82 ~~~~~l~v~R 91 (98)
T 2jxo_A 82 DETKLLVVDR 91 (98)
T ss_dssp TEEEEEECCH
T ss_pred CcEEEEEEEC
Confidence 3 45677766
No 323
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1
Probab=97.73 E-value=1.4e-05 Score=69.02 Aligned_cols=55 Identities=29% Similarity=0.454 Sum_probs=48.4
Q ss_pred CCCCeeehHHHHHHHHcCCEEEEecCccccccccccccccEEEEEecCchhhHHh
Q psy9829 9 KCSGIIRLSAIRDMMDRGRHGLLDITPNAVDRLNYAQFYPIVIFLRAETKSNVKE 63 (333)
Q Consensus 9 ~~~~~tsl~sVr~V~e~gkhCILDv~~~avk~L~~~~l~PivIfIkp~s~~~lk~ 63 (333)
.+.+.++.++|++++++|+.||||+++++++.++.....+++|||.||+.+.|++
T Consensus 79 ~n~yg~~~~~i~~~l~~g~~vil~id~~g~~~~~~~~~~~~~ifi~~p~~~~l~~ 133 (180)
T 1kgd_A 79 DAMYGTKLETIRKIHEQGLIAILDVEPQALKVLRTAEFAPFVVFIAAPTITPGLN 133 (180)
T ss_dssp TEEEEEEHHHHHHHHHTTCEEEEECCGGGHHHHSSTTTCEEEEEEECCSCCTTSC
T ss_pred CccccccHHHHHHHHHCCCeEEEEECHHHHHHHHHhCCCcEEEEEECCCHHHHHh
Confidence 4466788899999999999999999999999999877789999999999876653
No 324
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.71 E-value=4.1e-05 Score=62.67 Aligned_cols=69 Identities=7% Similarity=0.007 Sum_probs=50.2
Q ss_pred eeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcCCc
Q psy9829 89 TFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAHNC 165 (333)
Q Consensus 89 ~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g~~ 165 (333)
+|||.|.+..+. +..+++|++|.|||.| ... +|++||+ +.||+..+.++. ....+++ +..
T Consensus 30 ~~G~~v~~~~~~-----~~~gv~V~~V~~~spA---------~~a-GL~~GD~Il~Ing~~v~~~~~~~~~~~l~--~~~ 92 (114)
T 2d8i_A 30 TYGFSLSSVEED-----GIRRLYVNSVKETGLA---------SKK-GLKAGDEILEINNRAADALNSSMLKDFLS--QPS 92 (114)
T ss_dssp CCCCEEEEEEET-----TEEEEEEEECCTTSSH---------HHH-TCCTTCCEEEESSCBGGGCCHHHHHHHHT--SSE
T ss_pred ccCEEEEecCcC-----CcCCEEEEEeCCCCHH---------HHc-CCCCCCEEEEECCEECCCcCHHHHHHHHh--CCc
Confidence 799999885443 2268999999997754 433 4799999 589999998864 3334444 347
Q ss_pred eEEEEEEee
Q psy9829 166 ISAQIKRTH 174 (333)
Q Consensus 166 v~L~v~R~~ 174 (333)
+.|.|+|..
T Consensus 93 v~l~v~R~p 101 (114)
T 2d8i_A 93 LGLLVRTYP 101 (114)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEECC
Confidence 899998844
No 325
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=97.71 E-value=7.3e-05 Score=62.42 Aligned_cols=58 Identities=14% Similarity=0.256 Sum_probs=48.3
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhc--CCceEEEEeccCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS--KEKLSLTIRREVP 284 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s--~~~v~L~V~R~~~ 284 (333)
.+++|.++.++ ++|+ ..|++||+|++|||+.+.+ ..+....|... .+.+.|+|.|+..
T Consensus 57 ~g~~V~~V~~~---spA~--aGL~~GD~I~~inG~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~ 116 (134)
T 2l97_A 57 SGVIVRSVQSN---MPAN--GHLEKYDVITKVDDKEIAS--STDLQSALYNHSIGDTIKITYYRNGK 116 (134)
T ss_dssp SCEEEEECSTT---SGGG--TTSCSSCEEEEETTEECCC--HHHHHHHHHHSSTTCEEEEEEEETTE
T ss_pred CCEEEEEECCC---CchH--HCCCCCCEEEEECCEEcCC--HHHHHHHHHhCCCCCEEEEEEEECCE
Confidence 57999999999 7776 5799999999999998875 45677777764 6789999999753
No 326
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.70 E-value=4.8e-05 Score=59.84 Aligned_cols=70 Identities=14% Similarity=0.078 Sum_probs=52.2
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
...|||.+.++.+ .+.+++|++|.|||.| +.. +|++||+ +.+|+..++++. ..+..++. +
T Consensus 21 ~~~lG~~~~~~~~------~~~gv~V~~V~~~spA---------~~a-GL~~GD~I~~ing~~v~~~~~~~~~~~~~~-~ 83 (100)
T 2eeh_A 21 AGRLGFSVRGGSE------HGLGIFVSKVEEGSSA---------ERA-GLCVGDKITEVNGLSLESTTMGSAVKVLTS-S 83 (100)
T ss_dssp SSSCSEEEECCTT------TTCCEEEEEECTTSHH---------HHH-TCCSSCEEEEETTEECSSCCHHHHHHHHHS-C
T ss_pred CCCccEEEEcccc------CCCCEEEEEECCCCHH---------HHc-CCCCCCEEEEECCEECCCCCHHHHHHhhcC-C
Confidence 3469999998754 2368999999997754 433 3799999 589999999974 33334444 7
Q ss_pred CceEEEEEEe
Q psy9829 164 NCISAQIKRT 173 (333)
Q Consensus 164 ~~v~L~v~R~ 173 (333)
..+.|.|.|.
T Consensus 84 ~~v~l~v~R~ 93 (100)
T 2eeh_A 84 SRLHMMVRRM 93 (100)
T ss_dssp SSEEEEEEEC
T ss_pred CEEEEEEEEC
Confidence 8899999883
No 327
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.69 E-value=2.5e-05 Score=63.16 Aligned_cols=70 Identities=9% Similarity=0.027 Sum_probs=52.2
Q ss_pred ccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcchh--hhhhhhc
Q psy9829 86 VGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVVGS--WQVFRIA 162 (333)
Q Consensus 86 ~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~~a--~~alr~~ 162 (333)
...+|||.+.++. +.+++|++|.|||.| +.. +|++||+ +.||+..+.+.... ..+++..
T Consensus 28 ~~~~lG~~~~~~~--------~~gv~V~~V~~~spA---------~~a-GL~~GD~Il~vng~~v~~~~~~~~~~~~~~~ 89 (117)
T 1uit_A 28 GSEPLGISIVSGE--------KGGIYVSKVTVGSIA---------HQA-GLEYGDQLLEFNGINLRSATEQQARLIIGQQ 89 (117)
T ss_dssp SSCCCCEEEEECT--------TSCEEEEEECTTSHH---------HHH-TCCTTCEECEETTEETTTCCHHHHHHHTTSC
T ss_pred CCCCccEEEEccC--------CCCEEEEEECCCCHH---------HHc-CCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 3468999998764 358999999998754 432 3799999 58999999888532 2233456
Q ss_pred CCceEEEEEEe
Q psy9829 163 HNCISAQIKRT 173 (333)
Q Consensus 163 g~~v~L~v~R~ 173 (333)
+..++|.|.|.
T Consensus 90 g~~v~l~v~r~ 100 (117)
T 1uit_A 90 CDTITILAQYN 100 (117)
T ss_dssp CSEEEEEECCC
T ss_pred CCeEEEEEEEC
Confidence 77899999874
No 328
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.66 E-value=8.8e-05 Score=58.28 Aligned_cols=66 Identities=9% Similarity=0.035 Sum_probs=49.9
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhc-
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIA- 162 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~- 162 (333)
..||||.|.+. ..+++|++|.++ |+ +.+|++||+ +.||+.++.+++ ..+.+|+..
T Consensus 20 ~~g~G~~i~~~---------~~Gv~V~~v~~~----------a~--~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 78 (96)
T 1ujv_A 20 AQGFGFTIADS---------PTGQRVKQILDI----------QG--CPGLCEGDLIVEINQQNVQNLSHTEVVDILKDCP 78 (96)
T ss_dssp SSSSSEEEEEE---------TTEEEEEEESCG----------GG--STTCCSSCEEEEETTEECSSCCHHHHHHHHHHSC
T ss_pred CCceeEEEEcC---------CCCEEEEEEecc----------cc--cCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 36899998632 237999999993 22 245799999 589999999983 556777773
Q ss_pred -CCceEEEEEEe
Q psy9829 163 -HNCISAQIKRT 173 (333)
Q Consensus 163 -g~~v~L~v~R~ 173 (333)
+..+.|.|+|.
T Consensus 79 ~g~~v~l~v~R~ 90 (96)
T 1ujv_A 79 IGSETSLIIHRG 90 (96)
T ss_dssp TTSEEEEEEECC
T ss_pred CCCEEEEEEEEC
Confidence 67899999884
No 329
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=97.64 E-value=9.7e-05 Score=58.88 Aligned_cols=68 Identities=7% Similarity=0.018 Sum_probs=48.6
Q ss_pred ceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcCC
Q psy9829 88 STFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAHN 164 (333)
Q Consensus 88 ~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g~ 164 (333)
.+|||++.++... +..+++|++|.|||.| .. .+|++||+ +.||+..+.+.. ....++ .+.
T Consensus 20 ~~~Gf~v~~~~~~-----~~~g~~V~~V~~~spA---------~~-aGL~~GD~Il~vng~~v~~~~~~~l~~~l--~~~ 82 (94)
T 3kzd_A 20 DTYGFSLSSVEED-----GIRRLYVNSVKETGLA---------SK-KGLKAGDEILEINNRAADALNSSMLKDFL--SQP 82 (94)
T ss_dssp -CCSEEEEEECSS-----SSCEEEEEEECTTSHH---------HH-TTCCTTCEEEEETTEEGGGCCHHHHHHHH--HSS
T ss_pred CCcCEEEEecCCC-----CcCCeEEEEECCCCHH---------HH-cCCCCCCEEEEECCEECCCCCHHHHHHHH--hCC
Confidence 4799999876532 3468999999997754 33 34799999 589999998864 222233 366
Q ss_pred ceEEEEEE
Q psy9829 165 CISAQIKR 172 (333)
Q Consensus 165 ~v~L~v~R 172 (333)
.++|.|+.
T Consensus 83 ~l~ltV~~ 90 (94)
T 3kzd_A 83 SLGLLVRT 90 (94)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEe
Confidence 78888865
No 330
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax}
Probab=97.62 E-value=4.4e-05 Score=66.90 Aligned_cols=77 Identities=13% Similarity=0.123 Sum_probs=58.1
Q ss_pred CCCCCCCeeehHHHHHHHHcCCEEEEecCcccccccccccc--ccEEEEEecCchhhHH-hhhcCCCcchhhHHHHHhhc
Q psy9829 6 DSKKCSGIIRLSAIRDMMDRGRHGLLDITPNAVDRLNYAQF--YPIVIFLRAETKSNVK-ELRAGIPKYHTNLARQRSRV 82 (333)
Q Consensus 6 ~~~~~~~~tsl~sVr~V~e~gkhCILDv~~~avk~L~~~~l--~PivIfIkp~s~~~lk-~lr~~~~Es~~ki~~raer~ 82 (333)
+.....+.+..++|++++++|+.||+|+++++++.|+.... .+++|||.|++.+.+. +++.|..++.+.+..+..+.
T Consensus 83 ~~~~~~~~~~~~~i~~~l~~g~~vi~d~~~~~~~~l~~~~~~~~~~~i~l~~~s~e~l~~Rl~~R~~~~~~~i~~rl~~~ 162 (204)
T 2qor_A 83 KYANNFYGTLKSEYDLAVGEGKICLFEMNINGVKQLKESKHIQDGIYIFVKPPSIDILLGRLKNRNTEKPEEINKRMQEL 162 (204)
T ss_dssp EETTEEEEEEHHHHHHHHHTTCEEEEECCHHHHHHHHHCSSCSCCEEEEEECSCHHHHHHHHHTCTTSCHHHHHHHHHHH
T ss_pred HhCCCeecCCHHHHHHHHHcCCeEEEEECHHHHHHHHHhcCCCCeEEEEEcCCCHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 34455677888899999999999999999999998876533 4699999988877665 77777655555555555443
No 331
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.62 E-value=3.5e-05 Score=60.78 Aligned_cols=67 Identities=9% Similarity=0.032 Sum_probs=50.1
Q ss_pred ceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcCC
Q psy9829 88 STFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAHN 164 (333)
Q Consensus 88 ~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g~ 164 (333)
.+|||.+.+. .+++|++|.|||.| +. .+|++||+ +.||+..+.+.+ ....+++..+.
T Consensus 26 ~g~G~~~~~~----------~~~~V~~V~~~spA---------~~-aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~ 85 (100)
T 1whd_A 26 DGFGFTICCD----------SPVRVQAVDSGGPA---------ER-AGLQQLDTVLQLNERPVEHWKCVELAHEIRSCPS 85 (100)
T ss_dssp SSSSCBCCCS----------SSCBCCBCCTTSHH---------HH-HTCCSSCEEEEETTEECTTCCHHHHHHHHHHCSS
T ss_pred CeeeEEEeCC----------CCEEEEEECCCCHH---------HH-cCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 4788877642 46899999998754 33 34799999 589999998763 44566676677
Q ss_pred ceEEEEEEee
Q psy9829 165 CISAQIKRTH 174 (333)
Q Consensus 165 ~v~L~v~R~~ 174 (333)
.+.|.|.|..
T Consensus 86 ~v~l~v~R~~ 95 (100)
T 1whd_A 86 EIILLVWRVS 95 (100)
T ss_dssp EEEEEEEECC
T ss_pred eEEEEEEECC
Confidence 7999998843
No 332
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=97.57 E-value=5.1e-05 Score=60.06 Aligned_cols=74 Identities=15% Similarity=0.110 Sum_probs=52.1
Q ss_pred cceeeEEEecccCCC-CCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhc
Q psy9829 87 GSTFVGSVLGARGAL-DLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIA 162 (333)
Q Consensus 87 G~~~g~~i~gg~d~p-~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~ 162 (333)
+.+|||.+.+....- .....+.+++|++|.+||.| +.. +|++||+ +.||+..+.+.+ ....+++..
T Consensus 26 ~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA---------~~a-Gl~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 95 (104)
T 2z17_A 26 NETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPA---------HCA-GLQAGDVLANINGVSTEGFTYKQVVDLIRSS 95 (104)
T ss_dssp TSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHH---------HHH-TCCTTCBCCEETTEECTTCCHHHHHHHHHHT
T ss_pred CCCccEEEEeeecccCCcccCCCCeEEEEECCCChH---------HHc-CCCCCCEEEEECCEEcCCCCHHHHHHHHHhC
Confidence 458999999854321 11124679999999997654 443 3799999 699999999653 556677776
Q ss_pred CCceEEEE
Q psy9829 163 HNCISAQI 170 (333)
Q Consensus 163 g~~v~L~v 170 (333)
+..++|.|
T Consensus 96 ~~~v~l~v 103 (104)
T 2z17_A 96 GNLLTIET 103 (104)
T ss_dssp TTEEEEEC
T ss_pred CCcEEEEE
Confidence 66777654
No 333
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=97.56 E-value=0.00012 Score=58.57 Aligned_cols=57 Identities=26% Similarity=0.465 Sum_probs=47.2
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREV 283 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~ 283 (333)
.+++|..+.++ ++|++- .|++||+|++|||+.+.+ ..+....|+ ..+.+.|+|.|+.
T Consensus 35 ~gv~V~~V~~~---spA~~a-Gl~~GD~I~~ing~~v~~--~~~~~~~l~-~g~~v~l~v~R~g 91 (112)
T 2p3w_A 35 SGIYVQEVAPN---SPSQRG-GIQDGDIIVKVNGRPLVD--SSELQEAVL-TESPLLLEVRRGN 91 (112)
T ss_dssp SSEEEEEECTT---SHHHHH-TCCTTCEEEEETTEECCS--HHHHHHHHH-HCSSEEEEEEETT
T ss_pred CCeEEEEECCC---ChHHHC-CCCCCCEEEEECCEECCC--HHHHHHHHh-CCCeEEEEEEECC
Confidence 57999999999 776654 599999999999998874 577777774 4778999999875
No 334
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=97.53 E-value=0.0001 Score=56.67 Aligned_cols=56 Identities=20% Similarity=0.316 Sum_probs=45.8
Q ss_pred EEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhc-CCceEEEEeccC
Q psy9829 222 IFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS-KEKLSLTIRREV 283 (333)
Q Consensus 222 IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s-~~~v~L~V~R~~ 283 (333)
++|.++.++ ++|++. .|++||+|++|||+... +.++....|+.. .+.+.|+|.|+.
T Consensus 6 ~~V~~v~~~---spA~~a-Gl~~GD~I~~ing~~v~--~~~~~~~~l~~~~g~~v~l~v~R~g 62 (91)
T 2zpm_A 6 PVLENVQPN---SAASXA-GLQAGDRIVXVDGQPLT--QWVTFVMLVRDNPGXSLALEIERQG 62 (91)
T ss_dssp CBCSEECTT---SHHHHT-TCCTTCEEEEETTEECC--CHHHHHHHHHHCTTCCEEEEEEETT
T ss_pred eEEEEECCC---ChHHhc-CCCCCCEEEEECCeEcC--CHHHHHHHHhcCCCCeEEEEEEECC
Confidence 568899999 777654 49999999999998876 467888888764 568999999875
No 335
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=97.53 E-value=0.0016 Score=66.54 Aligned_cols=156 Identities=16% Similarity=0.169 Sum_probs=87.5
Q ss_pred CCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcch----------hhhhhh--hcCCceEEEEEEe
Q psy9829 107 DPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVVG----------SWQVFR--IAHNCISAQIKRT 173 (333)
Q Consensus 107 D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~~----------a~~alr--~~g~~v~L~v~R~ 173 (333)
+.|++|++|.||| ||+. . ||+||+ +.+||..|..... -..++. ..|..++|.|.|.
T Consensus 276 ~~Gv~V~~V~~~s---------pA~~-a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~ 344 (539)
T 4fln_A 276 NEGVLVRRVEPTS---------DASK-V-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRA 344 (539)
T ss_dssp SBCEEEEEECTTS---------GGGG-T-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEET
T ss_pred cCceeeecccCCC---------hHHh-C-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEEC
Confidence 5799999999976 4443 3 699999 5899988865421 112232 3577899998882
Q ss_pred e-------ccCCCCCCCCC--------CC-CCCceeEEe-eecCCC----ccccccceeecccc---cccCeEEEEEEcc
Q psy9829 174 H-------FNYDQPEKGEM--------SF-RKGDVFHVI-DTLHNG----VVGSWQVFRIDFGI---ILGNKIFVKEVTH 229 (333)
Q Consensus 174 ~-------~~~~~p~~~~l--------~~-~~g~~~hv~-~sl~~~----~lG~~~~~~~d~G~---~l~~~IfI~~I~~ 229 (333)
. ...+.|..-.. .+ ..|-+++-. ..+..+ ..+.+......++. .-..++.|+.|.+
T Consensus 345 Gk~~~v~Vtl~~~~~~~~~~~~~~~p~~~~~~Gl~f~~Lt~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gVvvs~V~~ 424 (539)
T 4fln_A 345 GEHKKVQVVLRPRVHLVPYHIDGGQPSYIIVAGLVFTPLSEPLIEEECEDTIGLKLLTKARYSVARFRGEQIVILSQVLA 424 (539)
T ss_dssp TEEEEEEEECBCCCCSSCSCTTSSCCCCCCSTTEEEEECCHHHHTTSCSSSSCHHHHHHHHHCCCSSTTCCCEEEEEECC
T ss_pred CEEEEEEEEEccCccccccccccCCCccccccceEEeeCCHHHHHhhcccccCceeeehhhhhhhccCCceEEEEEEecC
Confidence 2 11122211000 00 112222211 000000 00000000000000 0014689999999
Q ss_pred CcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCc-eEEEE
Q psy9829 230 RLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEK-LSLTI 279 (333)
Q Consensus 230 g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~-v~L~V 279 (333)
+ ++|+. ..++.||+|++|||+... +++|-+++|+.+++. +.|.+
T Consensus 425 ~---s~a~~-~g~~~gdiI~~vNg~~V~--s~~~l~~~l~~~k~~~l~~~~ 469 (539)
T 4fln_A 425 N---EVNIG-YEDMNNQQVLKFNGIPIR--NIHHLAHLIDMCKDKYLVFEF 469 (539)
T ss_dssp C---GGGTT-CSSCCSEEEEEETTEECC--SHHHHHHHHHTCCSSEEEEEE
T ss_pred C---chhhh-cCCCCCCEEEeECCEEcC--CHHHHHHHHHHcCCCeEEEEE
Confidence 8 65543 458999999999998776 467789999999886 44444
No 336
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=97.47 E-value=0.00011 Score=56.26 Aligned_cols=66 Identities=14% Similarity=0.028 Sum_probs=48.5
Q ss_pred eeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeec--cCcchhhhhhhh--cC
Q psy9829 89 TFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLH--NGVVGSWQVFRI--AH 163 (333)
Q Consensus 89 ~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv--~gv~~a~~alr~--~g 163 (333)
+|||.+.. .+.+++|++|.|||.| +. .+|++||+ +.+|+..+ ........+++. .+
T Consensus 18 ~lG~~~~~---------~~~g~~V~~V~~~spA---------~~-aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g 78 (90)
T 2eaq_A 18 DFGFTIKW---------DIPGIFVASVEAGSPA---------EF-SQLQVDDEIIAINNTKFSYNDSKEWEEAMAKAQET 78 (90)
T ss_dssp CCSEEEEE---------ETTEEEEEEECTTSHH---------HH-TTCCTTCEEEEETTEECCTTCHHHHHHHHHHHHHH
T ss_pred cccEEEEe---------cCCCEEEEEECCCChH---------HH-cCCCCCCEEEEECCEEccCCCHHHHHHHHHhcCCC
Confidence 67887762 2468999999998754 33 24799999 58999999 444444556664 57
Q ss_pred CceEEEEEEe
Q psy9829 164 NCISAQIKRT 173 (333)
Q Consensus 164 ~~v~L~v~R~ 173 (333)
..+.|.|.|.
T Consensus 79 ~~v~l~v~R~ 88 (90)
T 2eaq_A 79 GHLVMDVRRY 88 (90)
T ss_dssp TEEEEEEEEE
T ss_pred CEEEEEEEeC
Confidence 7899999873
No 337
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=97.46 E-value=0.00011 Score=56.24 Aligned_cols=56 Identities=13% Similarity=0.177 Sum_probs=42.6
Q ss_pred CceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCc--chhhhhhhhcCCceEEEEEE
Q psy9829 108 PSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGV--VGSWQVFRIAHNCISAQIKR 172 (333)
Q Consensus 108 ~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv--~~a~~alr~~g~~v~L~v~R 172 (333)
.+++|++|.+||.| +..++|++||+ +.+|+..+.+. .....+++..+..+.|.|.|
T Consensus 23 ~gv~V~~v~~~s~A---------~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r 81 (92)
T 3cyy_A 23 SHIFVKEISQDSLA---------ARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQR 81 (92)
T ss_dssp EEEEEEEECTTCHH---------HHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEEC
T ss_pred CCEEEEEECCCChH---------HhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEe
Confidence 58999999998754 43223799999 58999999854 35556677666788899977
No 338
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.44 E-value=0.00019 Score=58.86 Aligned_cols=69 Identities=13% Similarity=0.204 Sum_probs=50.3
Q ss_pred ceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcch--hhhhhhhcCC
Q psy9829 88 STFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVVG--SWQVFRIAHN 164 (333)
Q Consensus 88 ~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~~--a~~alr~~g~ 164 (333)
.+|||.+.++.+ .+.+++|++|.+||.| +. .+|++||+ +.||+..+.+... ++..++. +.
T Consensus 32 ~~lG~~~~~~~~------~~~gv~V~~V~~~spA---------~~-aGL~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~ 94 (128)
T 1uf1_A 32 RSLGLTIRGGAE------YGLGIYITGVDPGSEA---------EG-SGLKVGDQILEVNGRSFLNILHDEAVRLLKS-SR 94 (128)
T ss_dssp CCCCEEEECCTT------TTCCCEEEEECTTCHH---------HH-HTCCTTCEEEEETTEECSSCCHHHHHHHHTT-CS
T ss_pred CccCEEEECccc------CCCCEEEEEECCCCHH---------HH-CCCCCCCEEEEECCEECCCCCHHHHHHHHhc-CC
Confidence 478999998643 2358999999998754 43 34799999 5899999998853 2233333 45
Q ss_pred ceEEEEEEe
Q psy9829 165 CISAQIKRT 173 (333)
Q Consensus 165 ~v~L~v~R~ 173 (333)
.+.|.|.|.
T Consensus 95 ~v~l~v~R~ 103 (128)
T 1uf1_A 95 HLILTVKDV 103 (128)
T ss_dssp EEEEEEECC
T ss_pred eEEEEEEEC
Confidence 788999873
No 339
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.43 E-value=0.00012 Score=57.03 Aligned_cols=63 Identities=13% Similarity=-0.045 Sum_probs=47.8
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
..+|||.+.+| +|++|.+||.| +.. +|++||+ +.||+..+.+.+ ....+++..+
T Consensus 23 ~~~lG~~~~~G-------------~V~~V~~~spA---------~~a-GL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g 79 (90)
T 1y7n_A 23 RYQLGFSVQNG-------------IICSLMRGGIA---------ERG-GVRVGHRIIEINGQSVVATPHEKIVHILSNAV 79 (90)
T ss_dssp TSCCCEEEETT-------------EEEEECTTSHH---------HHH-TCCSSCEEEEETTEECTTSCHHHHHHHHHHCC
T ss_pred ccccCeEecCC-------------EEEEECCCCHH---------HHc-CCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 55788888643 89999997754 433 4799999 589999997653 5566777778
Q ss_pred CceEEEEEE
Q psy9829 164 NCISAQIKR 172 (333)
Q Consensus 164 ~~v~L~v~R 172 (333)
..+.|.|.+
T Consensus 80 ~~v~l~v~p 88 (90)
T 1y7n_A 80 GEIHMKTMP 88 (90)
T ss_dssp EEEEEEEEC
T ss_pred CeEEEEEEE
Confidence 888888864
No 340
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=97.41 E-value=0.00017 Score=57.61 Aligned_cols=70 Identities=17% Similarity=0.095 Sum_probs=52.8
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCcccc-ccCCE-EEEceeeccCc--chhhhhhhh-
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSF-RKGDV-FHVIDTLHNGV--VGSWQVFRI- 161 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~l-r~gD~-I~Vnd~dv~gv--~~a~~alr~- 161 (333)
..||||.+.++.+ +.+++|++|.+||.| +.. +| ++||+ +.||+..+.+. .....+++.
T Consensus 12 ~~glG~~~~~~~~-------~~~~~V~~v~~~spA---------~~a-Gll~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 74 (112)
T 1qau_A 12 VGGLGFLVKERVS-------KPPVIISDLIRGGAA---------EQS-GLIQAGDIILAVNDRPLVDLSYDSALEVLRGI 74 (112)
T ss_dssp TTBTSEEEEECSS-------SSCEEEEEECTTSHH---------HHH-TCCCTTCEEEEETTEECTTSCHHHHHHHHHHS
T ss_pred CCceeEEEEecCC-------CCCEEEEEeCCCChH---------HHc-CCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 4589999987642 468999999997754 433 45 99999 58999999984 355556665
Q ss_pred cCCceEEEEEEe
Q psy9829 162 AHNCISAQIKRT 173 (333)
Q Consensus 162 ~g~~v~L~v~R~ 173 (333)
.+..+.|.|.|.
T Consensus 75 ~g~~v~l~v~R~ 86 (112)
T 1qau_A 75 ASETHVVLILRG 86 (112)
T ss_dssp CSSSEEEEEEEC
T ss_pred CCCcEEEEEEeC
Confidence 457799999883
No 341
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=97.41 E-value=0.0001 Score=60.33 Aligned_cols=69 Identities=14% Similarity=0.099 Sum_probs=51.1
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCc--chhhhhhhhc-
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGV--VGSWQVFRIA- 162 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv--~~a~~alr~~- 162 (333)
..||||.+.++.+ +.+++|++|.+||.| +.. +|++||+ +.||+..+.+. .....+++..
T Consensus 19 ~~g~G~~l~~~~~-------~~gv~V~~V~~~spA---------~~a-Gl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 81 (128)
T 2kjd_A 19 PSGYGFNLHSDKS-------KPGQFIRSVDPDSPA---------EAS-GLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGG 81 (128)
T ss_dssp SSSCCEEEEECSS-------SCSEEEEEECTTSHH---------HHH-TCCTTCEEEEETTEECTTCCHHHHHHHHHTTC
T ss_pred CCcccEEEEecCC-------CCCEEEEEeCCCChH---------HHc-CCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 4689999987642 358999999997754 433 3799999 58999999984 3455566654
Q ss_pred CCceEEEEEE
Q psy9829 163 HNCISAQIKR 172 (333)
Q Consensus 163 g~~v~L~v~R 172 (333)
+..+.|+|.|
T Consensus 82 ~~~~~l~v~R 91 (128)
T 2kjd_A 82 DETKLLVVDR 91 (128)
T ss_dssp SEEEEEEECH
T ss_pred CCEEEEEEEe
Confidence 4456788877
No 342
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=97.40 E-value=0.0002 Score=58.17 Aligned_cols=69 Identities=9% Similarity=-0.019 Sum_probs=50.7
Q ss_pred ccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCc--chhhhhhhhc
Q psy9829 86 VGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGV--VGSWQVFRIA 162 (333)
Q Consensus 86 ~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv--~~a~~alr~~ 162 (333)
...+|||.+.|. .+++|++|.|||.| +. .+|++||+ +.||+.++.+. .....+++..
T Consensus 32 ~~~~~G~~l~~~----------~~v~V~~V~~gspA---------~~-AGL~~GD~Il~VnG~~v~~~~~~dv~~~i~~~ 91 (109)
T 2vsv_A 32 EEGDLGFTLRGN----------APVQVHFLDPYCSA---------SV-AGAREGDYIVSIQLVDCKWLTLSEVMKLLKSF 91 (109)
T ss_dssp GGGCCCEEEESS----------SSCEEEEECTTSHH---------HH-TTCCTTCEEEEETTEECTTCCHHHHHHHHHTT
T ss_pred CCCceeEEEeCC----------CCeEEEEECCCCHH---------HH-cCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 357899988642 45899999998755 33 34799999 58999999965 4555666666
Q ss_pred CCc-eEEEEEEee
Q psy9829 163 HNC-ISAQIKRTH 174 (333)
Q Consensus 163 g~~-v~L~v~R~~ 174 (333)
+.. ++|.|.|..
T Consensus 92 ~~~~v~l~V~~~~ 104 (109)
T 2vsv_A 92 GEDEIEMKVVSLL 104 (109)
T ss_dssp TTSCEEEEEESCC
T ss_pred CCCeEEEEEEECC
Confidence 665 899987743
No 343
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A*
Probab=97.39 E-value=0.00013 Score=65.90 Aligned_cols=77 Identities=16% Similarity=0.139 Sum_probs=63.9
Q ss_pred CCCeeehHHHHHHHHcCCEEEEecCccccccccccccccEEEEEecCchhhHH-hhhcCCCcchhhHHHHHhhccccc
Q psy9829 10 CSGIIRLSAIRDMMDRGRHGLLDITPNAVDRLNYAQFYPIVIFLRAETKSNVK-ELRAGIPKYHTNLARQRSRVLFPV 86 (333)
Q Consensus 10 ~~~~tsl~sVr~V~e~gkhCILDv~~~avk~L~~~~l~PivIfIkp~s~~~lk-~lr~~~~Es~~ki~~raer~~qE~ 86 (333)
.++.|+.+.|++++++|+.||||+++++.+++...-..+..|||.|++.+.++ +++.+.+++.+.+..|..+...|.
T Consensus 92 ~~yg~~~~~v~~~l~~G~illLDLD~~~~~~i~~~l~~~~tI~i~th~~~~l~~Rl~~rG~~~~e~i~~rl~~a~~e~ 169 (219)
T 1s96_A 92 NYYGTSREAIEQVLATGVDVFLDIDWQGAQQIRQKMPHARSIFILPPSKIELDRRLRGRGQDSEEVIAKRMAQAVAEM 169 (219)
T ss_dssp EEEEEEHHHHHHHHTTTCEEEEECCHHHHHHHHHHCTTCEEEEEECSSHHHHHHHHHTTSCSCHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHhcCCeEEEEECHHHHHHHHHHccCCEEEEEECCCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 45668888999999999999999999999998875446789999999988876 577787788888888887765554
No 344
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=97.39 E-value=0.00025 Score=54.44 Aligned_cols=57 Identities=19% Similarity=0.189 Sum_probs=44.0
Q ss_pred eEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhc--CCceEEEEeccC
Q psy9829 221 KIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS--KEKLSLTIRREV 283 (333)
Q Consensus 221 ~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s--~~~v~L~V~R~~ 283 (333)
++.|..+.|+ ++|++- .|++||+|++|||+.+.+ .++..++++.. .+.+.|+|.|+.
T Consensus 20 G~~V~~~~~~---s~A~~a-Gl~~GD~I~~ing~~v~~--~~d~~~~~~~~~~g~~v~l~v~R~g 78 (87)
T 2i6v_A 20 GYRVSPGKDP---VLFESI-GLQDGDMAVALNGLDLTD--PNVMNTLFQSMNEMTEMSLTVERDG 78 (87)
T ss_dssp EEEEEECSCH---HHHHHT-TCCTTCEEEEETTEETTC--HHHHHHHHHTGGGCSEEEEEEEETT
T ss_pred EEEEEeCCCC---CHHHHC-CCCCCCEEEEECCEECCC--HHHHHHHHHhcCCCCEEEEEEEECC
Confidence 5677777776 666654 599999999999998764 56666777653 568999999875
No 345
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=97.38 E-value=0.00014 Score=54.05 Aligned_cols=65 Identities=11% Similarity=0.139 Sum_probs=46.6
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
...|||.+. .+++|++|.|||.| +..+.|++||+ +.+|+..+.+.+ ....+++..+
T Consensus 12 ~~~~g~~~~------------~gv~V~~v~~~s~A---------~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 70 (81)
T 2rcz_A 12 NEEYGLRLA------------SHIFVKEISQDSLA---------ARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSK 70 (81)
T ss_dssp TCCCCEEEE------------EEEEEEEECTTSHH---------HHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTST
T ss_pred CCCCCEEEe------------CCEEEEEECCCChH---------HHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCC
Confidence 446666665 35999999998754 33223799999 589999999553 4455666666
Q ss_pred CceEEEEEE
Q psy9829 164 NCISAQIKR 172 (333)
Q Consensus 164 ~~v~L~v~R 172 (333)
..+.|.|.|
T Consensus 71 ~~v~l~v~R 79 (81)
T 2rcz_A 71 GKLKMVVQR 79 (81)
T ss_dssp TEEEEEEEC
T ss_pred CeEEEEEEe
Confidence 688888876
No 346
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=97.37 E-value=0.00026 Score=68.94 Aligned_cols=61 Identities=13% Similarity=0.305 Sum_probs=53.1
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhc-CCceEEEEeccCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSS-KEKLSLTIRREVP 284 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s-~~~v~L~V~R~~~ 284 (333)
.+++|.++.++ ++|++.| |++||+|++|||+++.+++++++.++|+.. ...+.|+|.|+..
T Consensus 99 ~~~~V~~v~~~---spA~~aG-l~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~r~g~ 160 (388)
T 1fc6_A 99 KDVVVLTPAPG---GPAEKAG-ARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAPGA 160 (388)
T ss_dssp SCEEEEEECTT---SHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEEETTE
T ss_pred CcEEEEEeCCC---ChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEeCCC
Confidence 46899999999 8887765 999999999999999999999999999864 4579999988754
No 347
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=97.32 E-value=0.00035 Score=57.29 Aligned_cols=71 Identities=14% Similarity=0.122 Sum_probs=50.6
Q ss_pred ceeeEEEecccCCCCCCCCCCceEeEecCC--CCcccccCCCCCCCCccccccCCE-EEEceeeccCc--chhhhhhhhc
Q psy9829 88 STFVGSVLGARGALDLANYDPSTKPHSKST--GSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGV--VGSWQVFRIA 162 (333)
Q Consensus 88 ~~~g~~i~gg~d~p~~~~~D~~i~is~i~~--g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv--~~a~~alr~~ 162 (333)
.||++.+.... .+...+++|++|.+ |+.| +. .+|++||+ +.||+..+.+. .....+++..
T Consensus 29 ~G~~v~l~~~~-----~~~~~gv~V~~V~~~~~spA---------~~-aGL~~GD~Il~Vng~~v~~~~~~dl~~~l~~~ 93 (118)
T 2yub_A 29 RGFSVTVESAS-----SNYATTVQVKEVNRMHISPN---------NR-NAIHPGDRILEINGTPVRTLRVEEVEDAIKQT 93 (118)
T ss_dssp CSSEEEEECTT-----SSSCCEEEEEECCTTTSCTT---------HH-HHCCTTCCEEEESSSBTTTSCHHHHHHHHHCC
T ss_pred ceEEEEecccc-----ccCCCcEEEEEecCCCCChH---------HH-cCCCCCCEEEEECCEECCCcCHHHHHHHHHhC
Confidence 45666543222 23457999999999 8754 33 35799999 58999999888 5555566655
Q ss_pred CCceEEEEEEe
Q psy9829 163 HNCISAQIKRT 173 (333)
Q Consensus 163 g~~v~L~v~R~ 173 (333)
+..+.|.|.|.
T Consensus 94 g~~v~l~v~R~ 104 (118)
T 2yub_A 94 SQTLQLLIEHD 104 (118)
T ss_dssp SSCEEEEEEEC
T ss_pred CCEEEEEEEEC
Confidence 77899999873
No 348
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=97.30 E-value=0.00059 Score=56.57 Aligned_cols=57 Identities=18% Similarity=0.271 Sum_probs=46.3
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHh--cCCceEEEEeccCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDS--SKEKLSLTIRREVP 284 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~--s~~~v~L~V~R~~~ 284 (333)
.+++|.++.++ ++|++- |++||+|++|||+.+.+ .++....++. ..+.+.|+| |+..
T Consensus 25 ~gv~V~~V~~~---spA~~a--L~~GD~Il~InG~~v~~--~~dl~~~l~~~~~g~~v~l~V-R~g~ 83 (125)
T 2hga_A 25 DGVQIDSVVPG---SPASKV--LTPGLVIESINGMPTSN--LTTYSAALKTISVGEVINITT-DQGT 83 (125)
T ss_dssp CCEEEEEECSS---SGGGGT--SCTTCEEEEETTEECSS--HHHHHHHHTTCCTTCEEEEEE-TTEE
T ss_pred CceEEEEECCC---ChHHHh--cCCCCEEEEECCEEcCC--HHHHHHHHHhcCCCCEEEEEE-ECCE
Confidence 46899999999 777765 99999999999988764 4677777774 467899999 8764
No 349
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=97.28 E-value=0.00028 Score=69.88 Aligned_cols=66 Identities=26% Similarity=0.394 Sum_probs=51.6
Q ss_pred ccccccCeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHh--cCCceEEEEeccCCC
Q psy9829 214 FGIILGNKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDS--SKEKLSLTIRREVPR 285 (333)
Q Consensus 214 ~G~~l~~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~--s~~~v~L~V~R~~~~ 285 (333)
+|+....+++|.+|.++ ++|++.| |+.||+|++|||+.+.+. .+....+.. ..+.+.|+|.|+...
T Consensus 257 ~gl~~~~G~~V~~V~~~---spA~~aG-L~~GD~I~~vnG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~~ 324 (436)
T 4a8c_A 257 FNLDVQRGAFVSEVLPG---SGSAKAG-VKAGDIITSLNGKPLNSF--AELRSRIATTEPGTKVKLGLLRNGKP 324 (436)
T ss_pred hCCCCCcceEEEEECCC---ChHHHCC-CCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 34443468999999999 8887776 999999999999988765 455556654 467999999997643
No 350
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=97.26 E-value=0.00052 Score=53.84 Aligned_cols=56 Identities=20% Similarity=0.195 Sum_probs=44.7
Q ss_pred EEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC--CceEEEEeccCC
Q psy9829 223 FVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSK--EKLSLTIRREVP 284 (333)
Q Consensus 223 fI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~--~~v~L~V~R~~~ 284 (333)
.|.+|.++ ++|++- .|++||+|++|||+...+ .++....|.... +.+.|+|.|+..
T Consensus 5 ~V~~V~~~---spA~~a-Gl~~GD~I~~ing~~v~~--~~d~~~~l~~~~~~~~v~l~v~R~g~ 62 (95)
T 3id1_A 5 VVGEIAAN---SIAAEA-QIAPGTELKAVDGIETPD--WDAVRLQLVDKIGDESTTITVAPFGS 62 (95)
T ss_dssp BEEEECTT---SHHHHT-TCCTTCEEEEETTEECSS--HHHHHHHHHHTTTCSEEEEEEECTTC
T ss_pred EEEeeCCC---CHHHHc-CCCCCCEEEEECCEECCC--HHHHHHHHHHhcCCCcEEEEEEECCC
Confidence 48899999 776654 599999999999988764 567777776543 579999999874
No 351
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=97.25 E-value=0.00013 Score=59.71 Aligned_cols=69 Identities=17% Similarity=0.118 Sum_probs=52.3
Q ss_pred ceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCcccc-ccCCE-EEEceeeccCc--chhhhhhhh-c
Q psy9829 88 STFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSF-RKGDV-FHVIDTLHNGV--VGSWQVFRI-A 162 (333)
Q Consensus 88 ~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~l-r~gD~-I~Vnd~dv~gv--~~a~~alr~-~ 162 (333)
.||||.+.++.+ +.+++|++|.+||. |+.. +| ++||+ +.||+..+.+. .....+++. .
T Consensus 20 ~glG~~~~~~~~-------~~~~~V~~V~~~sp---------A~~a-Gll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 82 (127)
T 1b8q_A 20 GGLGFLVKERVS-------KPPVIISDLIRGGA---------AEQS-GLIQAGDIILAVNDRPLVDLSYDSALEVLRGIA 82 (127)
T ss_dssp SCCSCCEEECTT-------SSCEEECCCSSSSS---------HHHH-SSCCTTTCCCEETTEECSSSCHHHHHHHHHSCC
T ss_pred CcEeEEEEecCC-------CCCEEEEEeCCCCH---------HHHc-CCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 599999987542 47899999999764 4443 35 99999 69999999994 455556665 3
Q ss_pred CCceEEEEEEe
Q psy9829 163 HNCISAQIKRT 173 (333)
Q Consensus 163 g~~v~L~v~R~ 173 (333)
+..+.|.|.|.
T Consensus 83 g~~v~l~v~R~ 93 (127)
T 1b8q_A 83 SETHVVLILRG 93 (127)
T ss_dssp SSCEEEEEECC
T ss_pred CCeEEEEEEeC
Confidence 56799999873
No 352
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.23 E-value=0.00032 Score=56.79 Aligned_cols=72 Identities=6% Similarity=-0.033 Sum_probs=51.3
Q ss_pred ccceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCc--chhhhhhhhc
Q psy9829 86 VGSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGV--VGSWQVFRIA 162 (333)
Q Consensus 86 ~G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv--~~a~~alr~~ 162 (333)
.+.+|||.+.++ .+++|++|.+||.| +. .+|++||+ +.||+..+.+. .....+++..
T Consensus 24 ~~~~~G~~l~~~----------~~v~V~~V~~~spA---------~~-aGL~~GD~Il~InG~~v~~~~~~d~~~~i~~~ 83 (111)
T 1vae_A 24 EEGDLGFTLRGN----------TPVQVHFLDPHCSA---------SL-AGAKEGDYIVSIQGVDCKWLTVSEVMKLLKSF 83 (111)
T ss_dssp CSSCCSCCEESS----------SSCEECCCCTTSSH---------HH-HHCCTTCEEEEETTEECSSCCHHHHHHHHHHT
T ss_pred CCCcccEEEeCC----------CCEEEEEECCCCHH---------HH-cCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 356888888643 35899999997654 43 35799999 58999999854 4455566665
Q ss_pred CC-ceEEEEEEeeccC
Q psy9829 163 HN-CISAQIKRTHFNY 177 (333)
Q Consensus 163 g~-~v~L~v~R~~~~~ 177 (333)
+. .+.|.|.|.....
T Consensus 84 ~~~~v~l~V~~~~~~~ 99 (111)
T 1vae_A 84 GGEEVEMKVVSLLDST 99 (111)
T ss_dssp TTSEECEEEECEECCC
T ss_pred CCceEEEEEEecCCCc
Confidence 54 4899998865443
No 353
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=97.23 E-value=0.00063 Score=64.29 Aligned_cols=65 Identities=18% Similarity=0.274 Sum_probs=51.2
Q ss_pred ccccccCeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHh--cCCceEEEEeccCC
Q psy9829 214 FGIILGNKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDS--SKEKLSLTIRREVP 284 (333)
Q Consensus 214 ~G~~l~~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~--s~~~v~L~V~R~~~ 284 (333)
+|+....+++|.++.++ ++|++- .|++||+|++|||+...+ ..+...+|+. ..+.+.|+|.|+..
T Consensus 238 ~g~~~~~g~~V~~V~~~---spA~~a-GL~~GD~I~~ing~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~ 304 (318)
T 1te0_A 238 GGIDQLQGIVVNEVSPD---GPAANA-GIQVNDLIISVDNKPAIS--ALETMDQVAEIRPGSVIPVVVMRDDK 304 (318)
T ss_dssp SCSSSCCCEEEEEECTT---STTTTT-CCCTTCCEEEETTEECCC--HHHHHHHHHTSCTTCEEEEEEESSSC
T ss_pred ccCCCCCcEEEEEeCCC---ChHHHC-CCCCCCEEEEECCEEcCC--HHHHHHHHHhcCCCCEEEEEEEECCE
Confidence 33333468999999999 776654 599999999999998765 4777888875 46789999999864
No 354
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=97.16 E-value=0.00051 Score=66.09 Aligned_cols=65 Identities=28% Similarity=0.408 Sum_probs=51.7
Q ss_pred ccccccCeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHh--cCCceEEEEeccCC
Q psy9829 214 FGIILGNKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDS--SKEKLSLTIRREVP 284 (333)
Q Consensus 214 ~G~~l~~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~--s~~~v~L~V~R~~~ 284 (333)
+|+....+++|.+|.++ ++|++- .|++||+|++|||+... +..+...+|.. ..+.+.|+|.|+..
T Consensus 257 ~gl~~~~G~~V~~V~~~---spA~~a-GL~~GDvI~~ing~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~ 323 (345)
T 3stj_A 257 FNLDVQRGAFVSEVLPG---SGSAKA-GVKAGDIITSLNGKPLN--SFAELRSRIATTEPGTKVKLGLLRNGK 323 (345)
T ss_dssp TTCSCCSSEEEEEECTT---SHHHHH-TCCTTCEECEETTEECS--CHHHHHHHHHTSCTTCEEEEEEEETTE
T ss_pred cCCCCCceEEEEEeccC---ChHHHc-CCCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEECCE
Confidence 34433468999999999 777655 49999999999998876 56677788876 46799999999864
No 355
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=97.15 E-value=0.00014 Score=66.02 Aligned_cols=69 Identities=14% Similarity=0.100 Sum_probs=52.2
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhhcC
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRIAH 163 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~~g 163 (333)
..||||.+.++.+ +.+++|+.|.+||.| +.. +|++||+ +.||++.+.+.+ ..+.+++..+
T Consensus 19 ~~glG~~l~~~~~-------~~gv~V~~V~~gSpA---------~~a-GL~~GD~Il~VNG~~V~~~s~~dl~~~l~~~g 81 (216)
T 2krg_A 19 PSGYGFNLHSDKS-------KPGQFIRSVDPDSPA---------EAS-GLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGG 81 (216)
T ss_dssp SSSSCEEECCCSS-------SCSCBEEEECTTSHH---------HHH-TCCTTCBCCEETTEECTTCCTHHHHHHHHHHC
T ss_pred CCCceEEEEecCC-------CCCeEEEEeCCCChH---------HHc-CCCCCCEEEEECCEECCCCCHHHHHHHHHhcC
Confidence 3589999987653 458999999998754 433 3799999 699999999553 4455666667
Q ss_pred Cce-EEEEEE
Q psy9829 164 NCI-SAQIKR 172 (333)
Q Consensus 164 ~~v-~L~v~R 172 (333)
..+ .|+|.|
T Consensus 82 ~~v~~l~V~R 91 (216)
T 2krg_A 82 DETKLLVVDR 91 (216)
T ss_dssp SEEEEEECCH
T ss_pred CeEEEEEEEE
Confidence 778 888876
No 356
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=97.12 E-value=0.00061 Score=60.71 Aligned_cols=60 Identities=13% Similarity=0.087 Sum_probs=46.7
Q ss_pred CeEEEEEEccCcccCccccCCCCCCC-CEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEG-DVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREV 283 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~G-D~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~ 283 (333)
.|++|.+|.++ ++|++.| |+.| |+|++|||+.+.+.+.....-+-....+.+.|+|.|+.
T Consensus 16 ~G~~V~~V~~~---SpA~~AG-L~~G~D~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~ 76 (209)
T 3rle_A 16 EGYHVLRVQEN---SPGHRAG-LEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSK 76 (209)
T ss_dssp EEEEEEEECTT---SHHHHTT-CCTTTEEEEEETTEECCSSSSHHHHHHHHTTTSCEEEEEEETT
T ss_pred CEEEEEEECCC---CHHHHCC-CCcCCeEEEEECCEECcCHHHHHHHHHhcCCCCEEEEEEEecC
Confidence 47999999999 8877665 9999 99999999998887654432222344678999998864
No 357
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=97.12 E-value=0.00071 Score=52.89 Aligned_cols=56 Identities=16% Similarity=0.056 Sum_probs=43.9
Q ss_pred CCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcchhhhhhhh--cCCceEEEEEE
Q psy9829 106 YDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVVGSWQVFRI--AHNCISAQIKR 172 (333)
Q Consensus 106 ~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~~a~~alr~--~g~~v~L~v~R 172 (333)
.+.+++|++|.+|| ||+. +|++||+ +.+|+..+++......+++. .+..+.|.|.|
T Consensus 3 ~~~Gv~V~~V~~~s---------pA~~--GL~~GD~Il~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~R 61 (94)
T 2kl1_A 3 EAKGVYVMSVLPNM---------PAAG--RLEAGDRIAAIDGQPINTSEQIVSYVREKQAGDRVRVTFIR 61 (94)
T ss_dssp CCCCEECCCCCTTS---------TTBT--TBCTTCEEEEETTBCCCCHHHHHHHHHHSCTTCCEEEEEEE
T ss_pred CCCcEEEEEECCCC---------hHHh--CCCCCCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEE
Confidence 46789999999976 5554 4899999 58999998887655556665 47789999987
No 358
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii}
Probab=97.05 E-value=0.00043 Score=59.61 Aligned_cols=73 Identities=11% Similarity=0.045 Sum_probs=57.4
Q ss_pred CCeeehHHHHHHHHcCCEEEEecCccccccccccccccEEEEEecCchhhHH-hhhcCCCcchhhHHHHHhhcc
Q psy9829 11 SGIIRLSAIRDMMDRGRHGLLDITPNAVDRLNYAQFYPIVIFLRAETKSNVK-ELRAGIPKYHTNLARQRSRVL 83 (333)
Q Consensus 11 ~~~tsl~sVr~V~e~gkhCILDv~~~avk~L~~~~l~PivIfIkp~s~~~lk-~lr~~~~Es~~ki~~raer~~ 83 (333)
...+..+.+++++++|++||+|++++.+..+......+.+||+.||+.+.+. ++..|..++.+.+..+..+..
T Consensus 82 ~~~~~~~~i~~~l~~g~~vi~d~~~~~~~~~~~~~~~~~~v~~~~~~~e~l~~Rl~~R~~~~~~~i~~rl~~~~ 155 (205)
T 3tr0_A 82 HYGTEKDWVLRQLKAGRDVLLEIDWQGARQIRELFPPALSIFILPPSIEALRERLIKRRQDDTAIIEQRLALAR 155 (205)
T ss_dssp EEEEEHHHHHHHHHTTCEEEEECCHHHHHHHHHHCTTCEEEEEECSCHHHHHHHHHTCTTSCSSTHHHHHHHHH
T ss_pred cccchHHHHHHHHHcCCeEEEEECHHHHHHHHHhCCCcEEEEEECcCHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 4556778999999999999999999999998887778899999999876654 777776665555555554443
No 359
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=97.04 E-value=0.00094 Score=53.07 Aligned_cols=57 Identities=19% Similarity=0.195 Sum_probs=41.5
Q ss_pred eEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHh--cCCceEEEEeccC
Q psy9829 221 KIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDS--SKEKLSLTIRREV 283 (333)
Q Consensus 221 ~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~--s~~~v~L~V~R~~ 283 (333)
+++|....|+ ++|++- .|++||+|++|||+.+.+.. +...+++. ..+.+.|+|.|+.
T Consensus 38 G~~V~~~~pa---s~A~~a-Gl~~GDvI~~ing~~v~~~~--d~~~~~~~~~~g~~v~l~v~R~g 96 (105)
T 2i4s_A 38 GYRVSPGKDP---VLFESI-GLQDGDMAVALNGLDLTDPN--VMNTLFQSMNEMTEMSLTVERDG 96 (105)
T ss_dssp EEEEEECSCT---HHHHHH-TCCTTCEEEEETTEETTSTT--HHHHHHHHHTTCSEEEEEEEETT
T ss_pred EEEEecCCCC---CHHHHc-CCCCCCEEEEECCEECCCHH--HHHHHHHhcCCCCeEEEEEEECC
Confidence 4566666665 555554 59999999999999988764 44455554 4568999999875
No 360
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=96.99 E-value=0.0005 Score=68.55 Aligned_cols=60 Identities=15% Similarity=0.276 Sum_probs=49.7
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHh--cCCceEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDS--SKEKLSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~--s~~~v~L~V~R~~~~ 285 (333)
.+++|.+|.++ ++|++.| |+.||+|++|||+.+.+. .+....+.. ..+.+.|+|.|+...
T Consensus 282 ~G~~V~~V~~~---spA~~aG-L~~GDvI~~vnG~~v~~~--~~l~~~l~~~~~g~~v~l~V~R~g~~ 343 (451)
T 3pv2_A 282 QGALVSQVNPN---SPAELAG-LKAGDIITQINDTKITQA--TQVKTTISLLRVGSTVKIIVERDNKP 343 (451)
T ss_dssp CCEEEEEECTT---SHHHHHT-CCTTCEEEEETTEECCSH--HHHHHHHHTSCTTCEEEEEEEETTEE
T ss_pred ceEEEEecCCC---ChHHHcC-CCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 68999999999 8888776 999999999999988765 566666664 457999999997643
No 361
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1
Probab=96.99 E-value=0.00047 Score=60.42 Aligned_cols=76 Identities=18% Similarity=0.211 Sum_probs=60.3
Q ss_pred CCCCeeehHHHHHHHHcCCEEEEecCccccccccccccccEEEEEecCchhhHH-hhhcCCCcchhhHHHHHhhccc
Q psy9829 9 KCSGIIRLSAIRDMMDRGRHGLLDITPNAVDRLNYAQFYPIVIFLRAETKSNVK-ELRAGIPKYHTNLARQRSRVLF 84 (333)
Q Consensus 9 ~~~~~tsl~sVr~V~e~gkhCILDv~~~avk~L~~~~l~PivIfIkp~s~~~lk-~lr~~~~Es~~ki~~raer~~q 84 (333)
.+.+.++.+.|++++++++.|++|+.+++++.+....+.|.++|++||+...|. +++.+.+++++.+..+..+...
T Consensus 78 ~n~~g~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~p~~~ilde~~~~~d~~~e~~i~~~l~~~~~ 154 (198)
T 1lvg_A 78 GNLYGTSKEAVRAVQAMNRICVLDVDLQGVRSIKKTDLCPIYIFVQPPSLDVLEQRLRLRNTETEESLAKRLAAART 154 (198)
T ss_dssp TEEEEEEHHHHHHHHHTTCEEEEECCHHHHHHHTTSSCCCEEEEEECSCHHHHHHHHHHHTCSCHHHHHHHHHHHHH
T ss_pred CccCCCCHHHHHHHHHcCCcEEEECCHHHHHHHHhcCCCcEEEEEeCCCHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 344567889999999999999999999999888877888999999999987766 5555666666667666555443
No 362
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=96.93 E-value=0.00043 Score=54.10 Aligned_cols=53 Identities=15% Similarity=0.132 Sum_probs=41.6
Q ss_pred ceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcchhhhhhhhc--CCceEEEEEE
Q psy9829 109 STKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVVGSWQVFRIA--HNCISAQIKR 172 (333)
Q Consensus 109 ~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~~a~~alr~~--g~~v~L~v~R 172 (333)
|++|++|.||| ||+. +|++||+ +.+|+..+++......+++.. +..++|.|.|
T Consensus 2 Gv~V~~V~~~s---------pA~~--GL~~GD~I~~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~R 57 (91)
T 2kjp_A 2 GIYASSVVENM---------PAKG--KIEVGDKIISADGKNYQSAEKLIDYISSKKAGDKVTLKIER 57 (91)
T ss_dssp CSSCCCCCCSS---------CCSS--CCCSSCEEEEETTBCCSSHHHHHHHHSSCCSSCEECEEEES
T ss_pred ceEEEEECCCC---------hHHH--cCCCCCEEEEECCEECCCHHHHHHHHHcCCCCCEEEEEEEE
Confidence 68999999976 5555 3899999 589999998876555666653 6779999987
No 363
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=96.81 E-value=0.0022 Score=50.41 Aligned_cols=56 Identities=9% Similarity=0.062 Sum_probs=43.7
Q ss_pred CCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcchhhhhhhh--cCCceEEEEEE
Q psy9829 106 YDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVVGSWQVFRI--AHNCISAQIKR 172 (333)
Q Consensus 106 ~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~~a~~alr~--~g~~v~L~v~R 172 (333)
.+.|++|..|.||| ||+ . +|++||+ +.+|+..+.+......+|.. .+..+.|.|.|
T Consensus 5 ~~~Gv~V~~V~~~s---------pA~-~-GL~~GD~I~~Ing~~v~~~~dl~~~l~~~~~g~~v~l~v~R 63 (100)
T 3i18_A 5 TYDGVYVMSVKDDV---------PAA-D-VLHAGDLITEIDGNAFKSSQEFIDYIHSKKVGDTVKINYKH 63 (100)
T ss_dssp CCCCEEEEEECTTS---------GGG-G-TCCTTCEEEEETTBCCSSHHHHHHHHHTSCTTCEEEEEEEE
T ss_pred eCCCEEEEEeCCCC---------chH-H-CCCCCCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEE
Confidence 46799999999976 455 3 5899999 58999998887655556654 46778999887
No 364
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=96.74 E-value=0.0015 Score=52.11 Aligned_cols=59 Identities=19% Similarity=0.327 Sum_probs=44.7
Q ss_pred CCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcchhhhhhhhcCCceEEEEEE
Q psy9829 103 LANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVVGSWQVFRIAHNCISAQIKR 172 (333)
Q Consensus 103 ~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~~a~~alr~~g~~v~L~v~R 172 (333)
|+..+.+++|++|.+||. |+. .+|++||+ +.+|+..+++......+++. +..+.|.|.|
T Consensus 30 ~~~~~~gv~V~~V~~~sp---------A~~-aGl~~GD~I~~ing~~v~~~~~~~~~l~~-~~~v~l~v~R 89 (113)
T 2pzd_A 30 FPDVQHGVLIHKVILGSP---------AHR-AGLRPGDVILAIGEQMVQNAEDVYEAVRT-QSQLAVQIRR 89 (113)
T ss_dssp CCCCSSCEEEEEEBTTSH---------HHH-HTCCTTCEEEEETTEECCSHHHHHHHHHH-CSSEEEEEEE
T ss_pred ccCCCCCeEEEEeCCCCh---------HHH-cCCCCCCEEEEECCEECCCHHHHHHHHhC-CCeEEEEEEE
Confidence 334568999999999764 443 35799999 58999999877555556655 6778999987
No 365
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=96.72 E-value=0.002 Score=61.16 Aligned_cols=58 Identities=19% Similarity=0.382 Sum_probs=48.4
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
.+++|.++.++ ++|++- .|++||+|++|||+...+ .++..++|+. .+.+.|.|.|+..
T Consensus 256 ~gv~V~~V~~~---spA~~a-Gl~~GDvI~~ing~~v~~--~~~l~~~l~~-~~~v~l~v~R~g~ 313 (325)
T 1lcy_A 256 HGVLIHKVILG---SPAHRA-GLRPGDVILAIGEQMVQN--AEDVYEAVRT-QSQLAVQIRRGRE 313 (325)
T ss_dssp SCEEEEEECTT---SHHHHH-TCCTTCEEEEETTEECCS--HHHHHHHHTT-CSSEEEEEEETTE
T ss_pred CCeEEEEeCcC---ChHHHC-CCCCCCEEEEECCEEcCC--HHHHHHHHhC-CCeEEEEEEECCE
Confidence 57999999999 777654 499999999999988764 5777888876 5899999999763
No 366
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=96.71 E-value=0.0041 Score=58.66 Aligned_cols=59 Identities=19% Similarity=0.244 Sum_probs=47.2
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHh--cCCceEEEEec-cCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDS--SKEKLSLTIRR-EVP 284 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~--s~~~v~L~V~R-~~~ 284 (333)
.+++|.++.++ ++|++- .|++||+|++|||+.+.+. .+...+|.. ..+.+.|+|.| +..
T Consensus 242 ~g~~V~~v~~~---spA~~a-Gl~~GD~I~~ing~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~~g~ 303 (324)
T 1y8t_A 242 LGAKIVEVVAG---GAAANA-GVPKGVVVTKVDDRPINSA--DALVAAVRSKAPGATVALTFQDPSGG 303 (324)
T ss_dssp SSEEEEEECTT---STTTTT-TCCTTCEEEEETTEECCSH--HHHHHHHHTSCTTCEEEEEEECSSCC
T ss_pred CceEEEEECCC---ChHHHc-CCCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCEEEEEEEECCCC
Confidence 47999999999 766654 5999999999999987754 566677765 36789999999 653
No 367
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=96.51 E-value=0.0012 Score=65.05 Aligned_cols=56 Identities=16% Similarity=0.268 Sum_probs=47.7
Q ss_pred EEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 222 IFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 222 IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
++|..|.++ ++|++-| |++||+|++|||+.+.++. ...+|+.....|+|.|.|+..
T Consensus 92 ~~V~~V~~g---sPA~~AG-L~~GD~I~~InG~~v~~~~---~~~~l~~~g~~v~l~v~R~g~ 147 (403)
T 3k50_A 92 ALISYVVPG---SPAEEAG-LQRGHWIMMMNGDYITKKV---ESELLQGSTRQLQIGVYKEVV 147 (403)
T ss_dssp EEEEEECTT---SHHHHTT-CCTTCEEEEETTBCBCTTT---GGGGTSCSCEEEEEEEEEEEC
T ss_pred EEEEEeCCC---ChHHHcC-CCCCCEEEEECCEEccchh---HHHHhhCCCCEEEEEEEeCCc
Confidence 789999999 8888776 9999999999999988875 456777766789999988754
No 368
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=96.39 E-value=0.0035 Score=60.02 Aligned_cols=60 Identities=12% Similarity=0.315 Sum_probs=47.7
Q ss_pred CeEEEEEEccCcccCccccCCCCCC-----------CCEEEEeCCccCCCCCHHHHHHHHHhc--CCceEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAE-----------GDVLLKINNHPTDGMSVKEARKLIDSS--KEKLSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~-----------GD~Il~ING~~~~~~s~~eA~~~l~~s--~~~v~L~V~R~~~~ 285 (333)
.|++|.++.++ ++|++-| |+. ||+|++|||+...++ +|....|... .+.+.|+|.|+...
T Consensus 251 ~Gv~V~~V~~~---spA~~AG-l~~~~~~~~~~l~~GDvI~~ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~R~g~~ 323 (348)
T 3qo6_A 251 SGVLVLDAPPS---GPAGKAG-LQSTKRDGYGRLVLGDIITSVNGTKVSNG--SDLYRILDQCKVGDEVTVEVLRGDHK 323 (348)
T ss_dssp SSEEEEECCSS---SHHHHHT-CCCCEECSSSCEECCCEECEETTBCCSSS--HHHHHHHTTCCTTCEEEEEEECSSSE
T ss_pred ceEEEEEecCC---ChHHHcC-CccccccccCCCCCCCEEEEECCEEeCCH--HHHHHHHHhCCCcCEEEEEEEECCEE
Confidence 58999999999 7665543 666 999999999988765 5677777653 57999999998643
No 369
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=96.39 E-value=0.0024 Score=63.54 Aligned_cols=64 Identities=22% Similarity=0.352 Sum_probs=50.3
Q ss_pred cccccCeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHh--cCCceEEEEeccCC
Q psy9829 215 GIILGNKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDS--SKEKLSLTIRREVP 284 (333)
Q Consensus 215 G~~l~~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~--s~~~v~L~V~R~~~ 284 (333)
|+.-..+++|.+|.++ ++|++. .|++||+|++|||+.+.+. .+...+|.. ..+.+.|+|.|+..
T Consensus 281 gl~~~~G~~V~~V~~g---spA~~A-GL~~GDvI~~inG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~ 346 (448)
T 1ky9_A 281 KVDAQRGAFVSQVLPN---SSAAKA-GIKAGDVITSLNGKPISSF--AALRAQVGTMPVGSKLTLGLLRDGK 346 (448)
T ss_dssp CCTTCCSEECCCCTTC---SSSTTT-TCCTTCEECBSSSSBCCSS--HHHHHHTTSSBTTCCCEEEEESSSC
T ss_pred CCCCCCceEEEEeccC---CHHHHc-CCCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEEEECCE
Confidence 3333358999999999 777664 6999999999999988876 466666764 46889999999764
No 370
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=96.35 E-value=0.0058 Score=50.73 Aligned_cols=55 Identities=16% Similarity=0.049 Sum_probs=43.1
Q ss_pred CCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcchhhhhhhh--cCCceEEEEEE
Q psy9829 107 DPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVVGSWQVFRI--AHNCISAQIKR 172 (333)
Q Consensus 107 D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~~a~~alr~--~g~~v~L~v~R 172 (333)
+.+++|++|.+|| ||+ .+|++||+ +.+|+..+++......+++. .+..++|.|.|
T Consensus 56 ~~g~~V~~V~~~s---------pA~--aGL~~GD~I~~inG~~v~~~~~l~~~l~~~~~g~~v~l~v~R 113 (134)
T 2l97_A 56 TSGVIVRSVQSNM---------PAN--GHLEKYDVITKVDDKEIASSTDLQSALYNHSIGDTIKITYYR 113 (134)
T ss_dssp CSCEEEEECSTTS---------GGG--TTSCSSCEEEEETTEECCCHHHHHHHHHHSSTTCEEEEEEEE
T ss_pred CCCEEEEEECCCC---------chH--HCCCCCCEEEEECCEEcCCHHHHHHHHHhCCCCCEEEEEEEE
Confidence 4789999999976 455 35899999 58999999887654455654 46789999987
No 371
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=96.34 E-value=0.0046 Score=49.23 Aligned_cols=56 Identities=9% Similarity=0.052 Sum_probs=42.7
Q ss_pred CCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcchhhhhhhhcCCceEEEEEE
Q psy9829 106 YDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVVGSWQVFRIAHNCISAQIKR 172 (333)
Q Consensus 106 ~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~~a~~alr~~g~~v~L~v~R 172 (333)
...+++|+.|.+||.| .. .+|++||+ +.+|+..+.+......+++ .+..+.|.|.|
T Consensus 33 ~~~gv~V~~V~~~spA---------~~-aGl~~GD~I~~ing~~v~~~~~~~~~l~-~g~~v~l~v~R 89 (112)
T 2p3w_A 33 VSSGIYVQEVAPNSPS---------QR-GGIQDGDIIVKVNGRPLVDSSELQEAVL-TESPLLLEVRR 89 (112)
T ss_dssp CCSSEEEEEECTTSHH---------HH-HTCCTTCEEEEETTEECCSHHHHHHHHH-HCSSEEEEEEE
T ss_pred CCCCeEEEEECCCChH---------HH-CCCCCCCEEEEECCEECCCHHHHHHHHh-CCCeEEEEEEE
Confidence 4679999999997754 33 34799999 5899999888755545564 46778899877
No 372
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=96.06 E-value=0.0047 Score=63.77 Aligned_cols=60 Identities=18% Similarity=0.217 Sum_probs=45.2
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVP 284 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~ 284 (333)
.+++|.+|.++ ++|++- .|++||+|++|||+......+.++.+.. ..++.|.|+|.|+..
T Consensus 496 ~gv~V~~V~~~---spA~~A-GL~~GD~I~aInG~~v~~~~l~~~l~~~-~~g~~v~l~v~R~g~ 555 (597)
T 4fgm_A 496 QGLDVLNVYHD---ESAYHA-GLSAGDKIIAIDHLQATEQSVKRILERY-IPGDTVTIHAFRRDE 555 (597)
T ss_dssp TEEEEEEECTT---SHHHHH-TCCTTCEEEEETTEECCTTTHHHHHTTC-CTTCEEEEEEEETTE
T ss_pred CeEEEEEeCCC---ChHHHC-CCCCCCEEEEECCEECCHHHHHHHHHhc-CCCCEEEEEEEECCE
Confidence 47999999999 777655 5999999999999887544444443321 246799999999753
No 373
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=96.04 E-value=0.001 Score=63.14 Aligned_cols=59 Identities=20% Similarity=0.380 Sum_probs=0.0
Q ss_pred CeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCceEEEEeccCCC
Q psy9829 220 NKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSVKEARKLIDSSKEKLSLTIRREVPR 285 (333)
Q Consensus 220 ~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s~~~v~L~V~R~~~~ 285 (333)
.+++|.++.++ ++|++. .|++||+|++|||+.+.+ .++...+|+. .+.+.|+|.|+...
T Consensus 254 ~g~~V~~v~~~---spA~~a-Gl~~GD~I~~ing~~v~~--~~~~~~~l~~-~~~v~l~v~R~g~~ 312 (332)
T 3num_A 254 SGAYIIEVIPD---TPAEAG-GLKENDVIISINGQSVVS--ANDVSDVIKR-ESTLNMVVRRGNED 312 (332)
T ss_dssp ------------------------------------------------------------------
T ss_pred CceEEEEeccC---CChHHc-CCCCCCEEEEECCEECCC--HHHHHHHHhC-CCeEEEEEEECCEE
Confidence 47899999999 777655 499999999999988754 4555666665 67899999997643
No 374
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=96.03 E-value=0.0066 Score=50.13 Aligned_cols=66 Identities=12% Similarity=0.054 Sum_probs=41.6
Q ss_pred ecccCCCCCC-CCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcchhhhhhhh--cCCceEEEE
Q psy9829 95 LGARGALDLA-NYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVVGSWQVFRI--AHNCISAQI 170 (333)
Q Consensus 95 ~gg~d~p~~~-~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~~a~~alr~--~g~~v~L~v 170 (333)
+.|+.|..+. ....+++|+.|.+||.| ..- |++||+ +.+|+..+.+......+++. .+..++|.|
T Consensus 11 ~~~~~~~~~~~~~~~gv~V~~V~~~spA---------~~a--L~~GD~Il~InG~~v~~~~dl~~~l~~~~~g~~v~l~V 79 (125)
T 2hga_A 11 SSGRENLYFQGHQPDGVQIDSVVPGSPA---------SKV--LTPGLVIESINGMPTSNLTTYSAALKTISVGEVINITT 79 (125)
T ss_dssp ------------CCCCEEEEEECSSSGG---------GGT--SCTTCEEEEETTEECSSHHHHHHHHTTCCTTCEEEEEE
T ss_pred cccccccccccCCCCceEEEEECCCChH---------HHh--cCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEE
Confidence 3466664433 24569999999997754 443 799999 58999999887655556653 466788888
Q ss_pred EE
Q psy9829 171 KR 172 (333)
Q Consensus 171 ~R 172 (333)
|
T Consensus 80 -R 80 (125)
T 2hga_A 80 -D 80 (125)
T ss_dssp -T
T ss_pred -E
Confidence 6
No 375
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=95.73 E-value=0.011 Score=47.70 Aligned_cols=67 Identities=7% Similarity=0.037 Sum_probs=46.6
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeecc--Ccchhhhhhhh--
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHN--GVVGSWQVFRI-- 161 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~--gv~~a~~alr~-- 161 (333)
..|+||.+.. .+.+.+|.+|.|||.| .. .+|++||+ +.||+..+. ...+.+..++.
T Consensus 27 ~~g~G~~l~~---------~~~~~~I~~V~~gSpA---------~~-AGL~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~ 87 (101)
T 3qik_A 27 EEDYGFDIEE---------KNKAVVVKSVQRGSLA---------EV-AGLQVGRKIYSINEDLVFLRPFSEVESILNQSF 87 (101)
T ss_dssp SSSSSEEEEE---------ETTEEEEEEECTTSHH---------HH-HTCCTTCBEEEETTEESTTSCHHHHHHHHHHHH
T ss_pred CCcccEEEEc---------cCCCeEEEEECCCCHH---------HH-cCCCCCCEEEEECCEEcCcCCHHHHHHHHHHhh
Confidence 4567777653 2457899999998754 33 45799999 589999875 33344445554
Q ss_pred -cCCceEEEEEE
Q psy9829 162 -AHNCISAQIKR 172 (333)
Q Consensus 162 -~g~~v~L~v~R 172 (333)
++..+.|.|..
T Consensus 88 ~~g~~v~LLV~~ 99 (101)
T 3qik_A 88 CSRRPLRLLVAT 99 (101)
T ss_dssp HTTCCEEEEEEC
T ss_pred ccCCeEEEEEec
Confidence 58888888753
No 376
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum}
Probab=95.57 E-value=0.0029 Score=56.10 Aligned_cols=71 Identities=13% Similarity=0.057 Sum_probs=44.6
Q ss_pred CCeeehHHHHHHHHcCCEEEEecCccccccccccc-cccEEEEEecCchhhHH-hhhcCCCcchhhHHHHHhh
Q psy9829 11 SGIIRLSAIRDMMDRGRHGLLDITPNAVDRLNYAQ-FYPIVIFLRAETKSNVK-ELRAGIPKYHTNLARQRSR 81 (333)
Q Consensus 11 ~~~tsl~sVr~V~e~gkhCILDv~~~avk~L~~~~-l~PivIfIkp~s~~~lk-~lr~~~~Es~~ki~~raer 81 (333)
...+..+.+++++++++.||||+++++...++..- ..+.+||+.||+.+.+. +++.|..++.+.+..+..+
T Consensus 103 ~~~~~~~~i~~~~~~~~~vild~~~~g~~~~~~~~~~~~~~v~v~~~~~~~l~~Rl~~R~~~~~~~i~~rl~~ 175 (231)
T 3lnc_A 103 FYGVPRKNLEDNVDKGVSTLLVIDWQGAFKFMEMMREHVVSIFIMPPSMEELRRRLCGRRADDSEVVEARLKG 175 (231)
T ss_dssp EEEEECTTHHHHHHHTCEEEEECCHHHHHHHHHHSGGGEEEEEEECSCHHHHHHC--------------CHHH
T ss_pred cCCCCHHHHHHHHHcCCeEEEEcCHHHHHHHHHhcCCCeEEEEEECCcHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 44567788999999999999999999988886543 35688999999987765 5666544444444444433
No 377
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=95.45 E-value=0.01 Score=45.13 Aligned_cols=55 Identities=15% Similarity=0.057 Sum_probs=39.8
Q ss_pred CceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcchhhhhhhh-cCCceEEEEEE
Q psy9829 108 PSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVVGSWQVFRI-AHNCISAQIKR 172 (333)
Q Consensus 108 ~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~~a~~alr~-~g~~v~L~v~R 172 (333)
...+|++|.+||.| .. .+|++||+ +.+|+..+++......+++. .+..+.|.|.|
T Consensus 4 ~~~~V~~v~~~spA---------~~-aGl~~GD~I~~ing~~v~~~~~~~~~l~~~~g~~v~l~v~R 60 (91)
T 2zpm_A 4 IEPVLENVQPNSAA---------SX-AGLQAGDRIVXVDGQPLTQWVTFVMLVRDNPGXSLALEIER 60 (91)
T ss_dssp --CBCSEECTTSHH---------HH-TTCCTTCEEEEETTEECCCHHHHHHHHHHCTTCCEEEEEEE
T ss_pred cCeEEEEECCCChH---------Hh-cCCCCCCEEEEECCeEcCCHHHHHHHHhcCCCCeEEEEEEE
Confidence 34689999997754 32 24799999 58999998887655556654 35678899877
No 378
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=95.28 E-value=0.015 Score=44.33 Aligned_cols=55 Identities=9% Similarity=0.074 Sum_probs=40.0
Q ss_pred CceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcchhhhhhhh--cCCceEEEEEE
Q psy9829 108 PSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVVGSWQVFRI--AHNCISAQIKR 172 (333)
Q Consensus 108 ~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~~a~~alr~--~g~~v~L~v~R 172 (333)
.|+.|+.+.|+|.| +. .+|++||+ +.+|+..+++......+++. .+..+.|.|.|
T Consensus 19 ~G~~V~~~~~~s~A---------~~-aGl~~GD~I~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R 76 (87)
T 2i6v_A 19 LGYRVSPGKDPVLF---------ES-IGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVER 76 (87)
T ss_dssp EEEEEEECSCHHHH---------HH-TTCCTTCEEEEETTEETTCHHHHHHHHHTGGGCSEEEEEEEE
T ss_pred EEEEEEeCCCCCHH---------HH-CCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEE
Confidence 37888888886543 32 35899999 58999999887544455543 46678999877
No 379
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=95.18 E-value=0.025 Score=53.55 Aligned_cols=60 Identities=18% Similarity=0.324 Sum_probs=45.5
Q ss_pred CCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcchhhhhhhhcCCceEEEEEE
Q psy9829 102 DLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVVGSWQVFRIAHNCISAQIKR 172 (333)
Q Consensus 102 ~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~~a~~alr~~g~~v~L~v~R 172 (333)
.+++.+.|++|++|.|||. |+. .+||+||+ +.+|+..+.+......+++. +..+.|.|.|
T Consensus 250 ~~~~~~~gv~V~~V~~~sp---------A~~-aGl~~GDvI~~ing~~v~~~~~l~~~l~~-~~~v~l~v~R 310 (325)
T 1lcy_A 250 SFPDVQHGVLIHKVILGSP---------AHR-AGLRPGDVILAIGEQMVQNAEDVYEAVRT-QSQLAVQIRR 310 (325)
T ss_dssp TSCCCSSCEEEEEECTTSH---------HHH-HTCCTTCEEEEETTEECCSHHHHHHHHTT-CSSEEEEEEE
T ss_pred ccccCCCCeEEEEeCcCCh---------HHH-CCCCCCCEEEEECCEEcCCHHHHHHHHhC-CCeEEEEEEE
Confidence 3444467999999999774 443 45899999 58999998887655556665 5778999987
No 380
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=95.18 E-value=0.019 Score=56.61 Aligned_cols=72 Identities=7% Similarity=-0.005 Sum_probs=51.0
Q ss_pred cceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcchhhhhhhhcCCc
Q psy9829 87 GSTFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVVGSWQVFRIAHNC 165 (333)
Q Consensus 87 G~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~~a~~alr~~g~~ 165 (333)
.+||||.+.-..+++ .+-.++|..|.|||.| +. .+|++||+ +.||+..+.+.. ...+++..+..
T Consensus 73 ~~G~~~~l~~~~~~~----~~~~~~V~~V~~gsPA---------~~-AGL~~GD~I~~InG~~v~~~~-~~~~l~~~g~~ 137 (403)
T 3k50_A 73 SYGFDYTLYKVLDND----TAYNALISYVVPGSPA---------EE-AGLQRGHWIMMMNGDYITKKV-ESELLQGSTRQ 137 (403)
T ss_dssp BCSEEEEEEECTTCS----SCEEEEEEEECTTSHH---------HH-TTCCTTCEEEEETTBCBCTTT-GGGGTSCSCEE
T ss_pred ccceEEEEEEcCCCC----cceeEEEEEeCCCChH---------HH-cCCCCCCEEEEECCEEccchh-HHHHhhCCCCE
Confidence 778888887443321 1235899999997754 44 34799999 589999988874 44555556667
Q ss_pred eEEEEEEe
Q psy9829 166 ISAQIKRT 173 (333)
Q Consensus 166 v~L~v~R~ 173 (333)
++|.|.|.
T Consensus 138 v~l~v~R~ 145 (403)
T 3k50_A 138 LQIGVYKE 145 (403)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEeC
Confidence 88888774
No 381
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=95.06 E-value=0.022 Score=58.17 Aligned_cols=66 Identities=18% Similarity=0.231 Sum_probs=46.8
Q ss_pred cccccCeEEEEEEccCcccCccccCCCCCCCCEEEEeCCccCCCCCH--------HHHHHHHH--hcCCceEEEEeccCC
Q psy9829 215 GIILGNKIFVKEVTHRLDNNASAGTHQLAEGDVLLKINNHPTDGMSV--------KEARKLID--SSKEKLSLTIRREVP 284 (333)
Q Consensus 215 G~~l~~~IfI~~I~~g~~ag~Aa~dg~L~~GD~Il~ING~~~~~~s~--------~eA~~~l~--~s~~~v~L~V~R~~~ 284 (333)
|+.-..|++|.+|.|+ ++|++ + |++||+|++|||+...+... .+-..++. ...+++.|+|.|+..
T Consensus 272 ~l~~~~Gv~V~~V~~~---spA~~-a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~Gk 346 (539)
T 4fln_A 272 KVPTNEGVLVRRVEPT---SDASK-V-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGE 346 (539)
T ss_dssp TCSSSBCEEEEEECTT---SGGGG-T-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEETTE
T ss_pred CCCCcCceeeecccCC---ChHHh-C-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEECCE
Confidence 4433468999999999 88765 4 99999999999987644210 11123333 357899999999864
Q ss_pred C
Q psy9829 285 R 285 (333)
Q Consensus 285 ~ 285 (333)
.
T Consensus 347 ~ 347 (539)
T 4fln_A 347 H 347 (539)
T ss_dssp E
T ss_pred E
Confidence 4
No 382
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=94.93 E-value=0.023 Score=44.27 Aligned_cols=52 Identities=6% Similarity=-0.160 Sum_probs=38.8
Q ss_pred EeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcchhhhhhhhc-C-CceEEEEEE
Q psy9829 111 KPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVVGSWQVFRIA-H-NCISAQIKR 172 (333)
Q Consensus 111 ~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~~a~~alr~~-g-~~v~L~v~R 172 (333)
+|..|.+||.| .. .+|++||+ +.+|+..+........+|... + ..+.|.|.|
T Consensus 5 ~V~~V~~~spA---------~~-aGl~~GD~I~~ing~~v~~~~d~~~~l~~~~~~~~v~l~v~R 59 (95)
T 3id1_A 5 VVGEIAANSIA---------AE-AQIAPGTELKAVDGIETPDWDAVRLQLVDKIGDESTTITVAP 59 (95)
T ss_dssp BEEEECTTSHH---------HH-TTCCTTCEEEEETTEECSSHHHHHHHHHHTTTCSEEEEEEEC
T ss_pred EEEeeCCCCHH---------HH-cCCCCCCEEEEECCEECCCHHHHHHHHHHhcCCCcEEEEEEE
Confidence 68899997754 33 35799999 589999988876555666543 2 578999987
No 383
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=94.46 E-value=0.052 Score=58.04 Aligned_cols=61 Identities=7% Similarity=0.073 Sum_probs=47.0
Q ss_pred CeEEEEEEccCc-----ccCccccCC-CCCCCCEEEEeCCccCCCCCHHHHHHHHHhc-CCceEEEEeccC
Q psy9829 220 NKIFVKEVTHRL-----DNNASAGTH-QLAEGDVLLKINNHPTDGMSVKEARKLIDSS-KEKLSLTIRREV 283 (333)
Q Consensus 220 ~~IfI~~I~~g~-----~ag~Aa~dg-~L~~GD~Il~ING~~~~~~s~~eA~~~l~~s-~~~v~L~V~R~~ 283 (333)
.+++|.++.++. ..++|++-| .|+ ||+|++|||+.+.+++ ++..+|+.. ...|.|+|.|+.
T Consensus 748 ~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~--~~~~~~~~~~g~~v~l~v~r~~ 815 (1045)
T 1k32_A 748 DHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGS--NIYRVLSEKAGTSARIRLSGKG 815 (1045)
T ss_dssp TEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTB--CHHHHHHTTTTSEEEEEEECSS
T ss_pred CEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchh--hHHHhhcCCCCCEEEEEEECCC
Confidence 578999999851 115666655 499 9999999999988886 677788764 458999999865
No 384
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=94.36 E-value=0.059 Score=52.18 Aligned_cols=69 Identities=13% Similarity=0.081 Sum_probs=48.4
Q ss_pred ceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcc--hhhhhhhh-cC
Q psy9829 88 STFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVV--GSWQVFRI-AH 163 (333)
Q Consensus 88 ~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~--~a~~alr~-~g 163 (333)
.|+|+.+.--. ..+.+++|++|.|||.| +. .+|++||+ +.||+..+.+.. .....++. .+
T Consensus 85 ~giG~~~~~~~------~~~~~~~V~~v~~~spA---------~~-aGl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g 148 (388)
T 1fc6_A 85 TGVGLEITYDG------GSGKDVVVLTPAPGGPA---------EK-AGARAGDVIVTVDGTAVKGMSLYDVSDLLQGEAD 148 (388)
T ss_dssp BBCSEEEEECT------TCSSCEEEEEECTTSHH---------HH-TTCCTTCEEEEETTEECTTCCHHHHHHHHCBSTT
T ss_pred EEEEEEEEEee------cCCCcEEEEEeCCCChH---------HH-cCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCC
Confidence 37888876321 13578999999998754 43 24799999 589999998863 33344542 46
Q ss_pred CceEEEEEE
Q psy9829 164 NCISAQIKR 172 (333)
Q Consensus 164 ~~v~L~v~R 172 (333)
..++|.|.|
T Consensus 149 ~~v~l~v~r 157 (388)
T 1fc6_A 149 SQVEVVLHA 157 (388)
T ss_dssp CEEEEEEEE
T ss_pred CEEEEEEEe
Confidence 668888877
No 385
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=94.34 E-value=0.045 Score=43.17 Aligned_cols=54 Identities=9% Similarity=0.090 Sum_probs=39.0
Q ss_pred ceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcchhhhhhhh--cCCceEEEEEE
Q psy9829 109 STKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVVGSWQVFRI--AHNCISAQIKR 172 (333)
Q Consensus 109 ~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~~a~~alr~--~g~~v~L~v~R 172 (333)
|+.|+.+.|+|.| .. .+|++||+ +.+|+..+++......+++. .+..+.|.|.|
T Consensus 38 G~~V~~~~pas~A---------~~-aGl~~GDvI~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R 94 (105)
T 2i4s_A 38 GYRVSPGKDPVLF---------ES-IGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVER 94 (105)
T ss_dssp EEEEEECSCTHHH---------HH-HTCCTTCEEEEETTEETTSTTHHHHHHHHHTTCSEEEEEEEE
T ss_pred EEEEecCCCCCHH---------HH-cCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCeEEEEEEE
Confidence 6678887775533 32 45899999 58999999888655455554 45678999877
No 386
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=94.27 E-value=0.051 Score=51.05 Aligned_cols=56 Identities=11% Similarity=0.084 Sum_probs=43.7
Q ss_pred CCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcchhhhhhhh--cCCceEEEEEE
Q psy9829 107 DPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVVGSWQVFRI--AHNCISAQIKR 172 (333)
Q Consensus 107 D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~~a~~alr~--~g~~v~L~v~R 172 (333)
+.+++|++|.||| ||+. .+|++||+ +.+|+..+.+......+++. .+..++|.|.|
T Consensus 243 ~~g~~V~~V~~~s---------pA~~-aGL~~GD~I~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R 301 (318)
T 1te0_A 243 LQGIVVNEVSPDG---------PAAN-AGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMR 301 (318)
T ss_dssp CCCEEEEEECTTS---------TTTT-TCCCTTCCEEEETTEECCCHHHHHHHHHTSCTTCEEEEEEES
T ss_pred CCcEEEEEeCCCC---------hHHH-CCCCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEE
Confidence 5799999999976 5554 35899999 58999998887555556654 46779999987
No 387
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum}
Probab=94.12 E-value=0.052 Score=47.99 Aligned_cols=75 Identities=11% Similarity=0.131 Sum_probs=57.8
Q ss_pred CCeeehHHHHHHHHcCCEEEEecCccccccccccc--cccEEEEEecCchhhHH-hhhcCCCcchhhHHHHHhhcccc
Q psy9829 11 SGIIRLSAIRDMMDRGRHGLLDITPNAVDRLNYAQ--FYPIVIFLRAETKSNVK-ELRAGIPKYHTNLARQRSRVLFP 85 (333)
Q Consensus 11 ~~~tsl~sVr~V~e~gkhCILDv~~~avk~L~~~~--l~PivIfIkp~s~~~lk-~lr~~~~Es~~ki~~raer~~qE 85 (333)
...+..+.++++++.++.|++|+.+++.++++.+- ..|..+|+++|+...|. .++.+..++.+.+..+..+...+
T Consensus 99 ~~g~~~~~i~~~l~~~~~~il~~~lsggq~qR~~i~~~~~~~~ll~~~~~~~Lde~~~~~d~~~~~~i~~~l~~~~~~ 176 (218)
T 1z6g_A 99 FYGTLKSEYDKAKEQNKICLFEMNINGVKQLKKSTHIKNALYIFIKPPSTDVLLSRLLTRNTENQEQIQKRMEQLNIE 176 (218)
T ss_dssp EEEEEHHHHHHHHHTTCEEEEEECHHHHHHHTTCSSCCSCEEEEEECSCHHHHHHHHHHTCCCCHHHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHhCCCcEEEEecHHHHHHHHHHhcCCCcEEEEEeCcCHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 34566778999999999999999999999888665 56799999999988777 56666666666666666554433
No 388
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=93.53 E-value=0.1 Score=48.90 Aligned_cols=67 Identities=15% Similarity=0.031 Sum_probs=47.9
Q ss_pred eeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcchhhhhhhh--cCCc
Q psy9829 89 TFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVVGSWQVFRI--AHNC 165 (333)
Q Consensus 89 ~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~~a~~alr~--~g~~ 165 (333)
.||+.+.- . ..+.+++|.+|.|||. |+. .+|++||+ +.+|+..+++...-..+++. .+..
T Consensus 230 ~lGi~~~~------~-~~~~g~~V~~v~~~sp---------A~~-aGl~~GD~I~~ing~~v~~~~~l~~~l~~~~~g~~ 292 (324)
T 1y8t_A 230 SLGVQVTN------D-KDTLGAKIVEVVAGGA---------AAN-AGVPKGVVVTKVDDRPINSADALVAAVRSKAPGAT 292 (324)
T ss_dssp ECCEEEES------C-SSSSSEEEEEECTTST---------TTT-TTCCTTCEEEEETTEECCSHHHHHHHHHTSCTTCE
T ss_pred ccceEeee------c-cCCCceEEEEECCCCh---------HHH-cCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCE
Confidence 67776641 1 1357899999999764 454 35899999 58999998887544445543 4677
Q ss_pred eEEEEEE
Q psy9829 166 ISAQIKR 172 (333)
Q Consensus 166 v~L~v~R 172 (333)
++|.|.|
T Consensus 293 v~l~v~R 299 (324)
T 1y8t_A 293 VALTFQD 299 (324)
T ss_dssp EEEEEEC
T ss_pred EEEEEEE
Confidence 9999977
No 389
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus}
Probab=92.89 E-value=0.11 Score=44.16 Aligned_cols=55 Identities=18% Similarity=0.276 Sum_probs=36.1
Q ss_pred eeehHHHHHHHHcCCEEEEecCccccccccccccccEEEEEecCchhhH-HhhhcC
Q psy9829 13 IIRLSAIRDMMDRGRHGLLDITPNAVDRLNYAQFYPIVIFLRAETKSNV-KELRAG 67 (333)
Q Consensus 13 ~tsl~sVr~V~e~gkhCILDv~~~avk~L~~~~l~PivIfIkp~s~~~l-k~lr~~ 67 (333)
.+..+.+++++++|+.||+|........++.....+++||+.|++.+.+ +++..|
T Consensus 84 g~~~~~i~~~l~~g~~vv~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~Rl~~R 139 (207)
T 2j41_A 84 GTPVQYVKDTMDEGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLEHLRERLVGR 139 (207)
T ss_dssp EEEHHHHHHHHHTTCEEEEECCGGGHHHHHHHCTTSEEEEEECCC-----------
T ss_pred CCCHHHHHHHHHcCCeEEEEECHHHHHHHHHhcCCeEEEEEECCCHHHHHHHHHhc
Confidence 3566789999999999999999888777765433568999998875543 355444
No 390
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=92.74 E-value=0.067 Score=51.23 Aligned_cols=56 Identities=11% Similarity=0.052 Sum_probs=43.4
Q ss_pred CCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcchhhhhhhh--cCCceEEEEEE
Q psy9829 107 DPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVVGSWQVFRI--AHNCISAQIKR 172 (333)
Q Consensus 107 D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~~a~~alr~--~g~~v~L~v~R 172 (333)
+.|++|++|.|||. |+. .+|++||+ +.+|+..+++...-..+++. .+..++|.|.|
T Consensus 262 ~~G~~V~~V~~~sp---------A~~-aGL~~GDvI~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R 320 (345)
T 3stj_A 262 QRGAFVSEVLPGSG---------SAK-AGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLR 320 (345)
T ss_dssp CSSEEEEEECTTSH---------HHH-HTCCTTCEECEETTEECSCHHHHHHHHHTSCTTCEEEEEEEE
T ss_pred CceEEEEEeccCCh---------HHH-cCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEE
Confidence 57999999999764 443 45799999 58999998877555455554 57789999988
No 391
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=92.28 E-value=0.025 Score=53.51 Aligned_cols=57 Identities=9% Similarity=0.089 Sum_probs=0.0
Q ss_pred CCCceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcchhhhhhhhcCCceEEEEEEe
Q psy9829 106 YDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVVGSWQVFRIAHNCISAQIKRT 173 (333)
Q Consensus 106 ~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~~a~~alr~~g~~v~L~v~R~ 173 (333)
.+.|++|.+|.+|| ||+. .+|++||+ +.+|+..+.+......+++. +..++|.|.|.
T Consensus 252 ~~~g~~V~~v~~~s---------pA~~-aGl~~GD~I~~ing~~v~~~~~~~~~l~~-~~~v~l~v~R~ 309 (332)
T 3num_A 252 VISGAYIIEVIPDT---------PAEA-GGLKENDVIISINGQSVVSANDVSDVIKR-ESTLNMVVRRG 309 (332)
T ss_dssp ---------------------------------------------------------------------
T ss_pred CCCceEEEEeccCC---------ChHH-cCCCCCCEEEEECCEECCCHHHHHHHHhC-CCeEEEEEEEC
Confidence 45799999999976 4554 35799999 58999998877655556654 66788988873
No 392
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=90.33 E-value=0.19 Score=51.73 Aligned_cols=54 Identities=6% Similarity=0.006 Sum_probs=40.1
Q ss_pred CceEeEecCCCCcccccCCCCCCCCccccccCCE-EEEceeeccCcchhhhhhhh--cCCceEEEEEE
Q psy9829 108 PSTKPHSKSTGSHLTHFNYDQPEKGEMSFRKGDV-FHVIDTLHNGVVGSWQVFRI--AHNCISAQIKR 172 (333)
Q Consensus 108 ~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~gD~-I~Vnd~dv~gv~~a~~alr~--~g~~v~L~v~R 172 (333)
.+++|++|.+|| ||+. .+|++||+ +.||+..|+ ...-..+++. .+..|+|.|.|
T Consensus 496 ~gv~V~~V~~~s---------pA~~-AGL~~GD~I~aInG~~v~-~~~l~~~l~~~~~g~~v~l~v~R 552 (597)
T 4fgm_A 496 QGLDVLNVYHDE---------SAYH-AGLSAGDKIIAIDHLQAT-EQSVKRILERYIPGDTVTIHAFR 552 (597)
T ss_dssp TEEEEEEECTTS---------HHHH-HTCCTTCEEEEETTEECC-TTTHHHHHTTCCTTCEEEEEEEE
T ss_pred CeEEEEEeCCCC---------hHHH-CCCCCCCEEEEECCEECC-HHHHHHHHHhcCCCCEEEEEEEE
Confidence 479999999976 4554 35899999 689999985 3333445553 56789999988
No 393
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=90.19 E-value=0.37 Score=45.83 Aligned_cols=73 Identities=8% Similarity=0.054 Sum_probs=49.0
Q ss_pred ceeeEEEecccCCCCCCCCCCceEeEecCCCCcccccCCCCCCCCcccccc-----------CCEE-EEceeeccCcchh
Q psy9829 88 STFVGSVLGARGALDLANYDPSTKPHSKSTGSHLTHFNYDQPEKGEMSFRK-----------GDVF-HVIDTLHNGVVGS 155 (333)
Q Consensus 88 ~~~g~~i~gg~d~p~~~~~D~~i~is~i~~g~~a~~~~~~gpa~g~l~lr~-----------gD~I-~Vnd~dv~gv~~a 155 (333)
-.||+.+.--...-.+ +-.|++|.+|.|||.| +. .+||+ ||+| .+|+..+.+...-
T Consensus 233 ~~lGi~~~~~~~~~~~--~~~Gv~V~~V~~~spA---------~~-AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~~dl 300 (348)
T 3qo6_A 233 PILGIKFAPDQSVEQL--GVSGVLVLDAPPSGPA---------GK-AGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSDL 300 (348)
T ss_dssp EECCCEECCTTTTTTT--TCSSEEEEECCSSSHH---------HH-HTCCCCEECSSSCEECCCEECEETTBCCSSSHHH
T ss_pred eecCcEEccchhhhhc--CCceEEEEEecCCChH---------HH-cCCccccccccCCCCCCCEEEEECCEEeCCHHHH
Confidence 3577766522211122 2369999999998765 22 23455 9995 8999999888655
Q ss_pred hhhhhh--cCCceEEEEEE
Q psy9829 156 WQVFRI--AHNCISAQIKR 172 (333)
Q Consensus 156 ~~alr~--~g~~v~L~v~R 172 (333)
..+|.. .+..++|.|.|
T Consensus 301 ~~~l~~~~~g~~v~l~v~R 319 (348)
T 3qo6_A 301 YRILDQCKVGDEVTVEVLR 319 (348)
T ss_dssp HHHHTTCCTTCEEEEEEEC
T ss_pred HHHHHhCCCcCEEEEEEEE
Confidence 556643 46789999987
No 394
>3kfv_A Tight junction protein ZO-3; structural genomics consortium, SGC, cell junction, cell membrane, membrane, SH3 domain; 2.80A {Homo sapiens}
Probab=83.34 E-value=0.46 Score=45.18 Aligned_cols=31 Identities=48% Similarity=0.914 Sum_probs=25.4
Q ss_pred ccccCCCCCCCCccccccCCEEEEceeeccC
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVIDTLHNG 151 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd~dv~g 151 (333)
+++|+|++...++|.|+.||++.|.|+...|
T Consensus 8 Ralfdy~~~~~~eL~F~kGDil~V~dt~~~~ 38 (308)
T 3kfv_A 8 RTHFELEPSPPSGLGFTRGDVFHVLDTLHPG 38 (308)
T ss_dssp EECSCBCCCSSSBCCBCTTCEEEEEEC----
T ss_pred EEecCcCCCCcccCCCccCCEEEEccccCCC
Confidence 5799999999999999999999998888766
No 395
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=81.60 E-value=1.5 Score=46.66 Aligned_cols=64 Identities=8% Similarity=-0.072 Sum_probs=43.2
Q ss_pred CCceEeEecCCCCcccccCCCCCCCCcc-ccccCCE-EEEceeeccCcchhhhhhhh-cCCceEEEEEE
Q psy9829 107 DPSTKPHSKSTGSHLTHFNYDQPEKGEM-SFRKGDV-FHVIDTLHNGVVGSWQVFRI-AHNCISAQIKR 172 (333)
Q Consensus 107 D~~i~is~i~~g~~a~~~~~~gpa~g~l-~lr~gD~-I~Vnd~dv~gv~~a~~alr~-~g~~v~L~v~R 172 (333)
+.+++|.+|.||... .-..++||+.-+ .|+ ||+ +.||+..+.+.......|+. .+..|+|.|.|
T Consensus 747 ~~~~~v~~v~~~~~~-~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~~~~~~~~~~~g~~v~l~v~r 813 (1045)
T 1k32_A 747 GDHYVVAKAYAGDYS-NEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGSNIYRVLSEKAGTSARIRLSG 813 (1045)
T ss_dssp TTEEEEEEECBSCTT-STTCBCGGGGGTCCCT-TCEEEEETTEECBTTBCHHHHHHTTTTSEEEEEEEC
T ss_pred CCEEEEEEecCCCcc-cccCCChHHHCCCCcC-CCEEEEECCEEccchhhHHHhhcCCCCCEEEEEEEC
Confidence 468999999997111 001123555432 279 999 58999999988755566654 57778999877
No 396
>3tvt_A Disks large 1 tumor suppressor protein; DLG, SRC-homology-3, guanylate kinase, phosphorylation-depen cell membrane; 1.60A {Drosophila melanogaster} PDB: 3uat_A*
Probab=80.78 E-value=0.75 Score=43.14 Aligned_cols=39 Identities=28% Similarity=0.640 Sum_probs=26.7
Q ss_pred cccccCCCCCCCC-----ccccccCCEEEEceeeccCcchhhhhhhh
Q psy9829 120 HLTHFNYDQPEKG-----EMSFRKGDVFHVIDTLHNGVVGSWQVFRI 161 (333)
Q Consensus 120 ~a~~~~~~gpa~g-----~l~lr~gD~I~Vnd~dv~gv~~a~~alr~ 161 (333)
++|||+|++..|. .|.|+.||+|.|.+++-++ -|+|-+.
T Consensus 8 vRa~fdY~~~~D~~~P~~gL~F~~gDiL~V~~~~d~~---wWqA~~v 51 (292)
T 3tvt_A 8 VRALFDYDPNRDDGLPSRGLPFKHGDILHVTNASDDE---WWQARRV 51 (292)
T ss_dssp EEECSCBCC---------CCCBCTTCEEEEEECCSSS---EEEECCC
T ss_pred EEEeccCCCCCCCCCCCCcCCcCCCCEEEEeecCCCC---eEEEEEe
Confidence 3689999976543 3899999999998876543 4666654
No 397
>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}
Probab=76.72 E-value=1.7 Score=29.53 Aligned_cols=27 Identities=26% Similarity=0.490 Sum_probs=22.7
Q ss_pred cccccCCCCCCCCccccccCCEEEEce
Q psy9829 120 HLTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 120 ~a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
+.+.|+|.+..+.+|.|+.||+|.|..
T Consensus 3 ~~al~dy~~~~~~eLs~~~Gd~i~v~~ 29 (54)
T 2a28_A 3 MEAIYAYEAQGDDEISIDPGDIITVIR 29 (54)
T ss_dssp EEBCSCBCCCSTTBCCBCTTCEEEEEE
T ss_pred EEECccCCcCCCCCccCCCCCEEEEEE
Confidence 456789999999999999999987733
No 398
>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A
Probab=74.96 E-value=2.9 Score=29.34 Aligned_cols=27 Identities=22% Similarity=0.661 Sum_probs=23.0
Q ss_pred cccccCCCCCCCCccccccCCEEEEce
Q psy9829 120 HLTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 120 ~a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
+.+.|+|+.....+|.|+.||+|.|-.
T Consensus 24 ~~alydy~a~~~~eLsf~~Gd~i~v~~ 50 (62)
T 1g2b_A 24 VLALYDYQEKSPREVTMKKGDILTLLN 50 (62)
T ss_dssp EEECSCBCCSSTTBCCBCTTCEEEEEE
T ss_pred EEEeeeECCCCCCccCCCCCCEEEEEE
Confidence 356899999999999999999987733
No 399
>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}
Probab=73.80 E-value=2.5 Score=29.12 Aligned_cols=26 Identities=19% Similarity=0.556 Sum_probs=22.0
Q ss_pred ccccCCCCCCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|.+..+.+|.|++||+|.|..
T Consensus 5 ~al~dy~~~~~~eLs~~~Gd~i~v~~ 30 (58)
T 2bz8_A 5 IVEFDYQAQHDDELTISVGEIITNIR 30 (58)
T ss_dssp EESSCBCCCSTTBCCBCTTCEEEEEE
T ss_pred EECcccCCCCcCEeeECCCCEEEEEE
Confidence 35688999999999999999988743
No 400
>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}
Probab=73.78 E-value=2.9 Score=29.09 Aligned_cols=27 Identities=26% Similarity=0.534 Sum_probs=22.5
Q ss_pred ccccCCCCCCCCccccccCCEEEEcee
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
.+.|+|.+..+.+|.|+.||+|.|...
T Consensus 10 ~al~dy~~~~~~eLs~~~Gd~i~v~~~ 36 (60)
T 2gnc_A 10 IAKFDYVGRSARELSFKKGASLLLYHR 36 (60)
T ss_dssp EESSCBCCSSTTBCCBCTTCEEEEEEE
T ss_pred EECCCCCcCCcCCcCCCCCCEEEEEEe
Confidence 356889999999999999999877444
No 401
>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A
Probab=73.42 E-value=2.6 Score=29.34 Aligned_cols=27 Identities=19% Similarity=0.524 Sum_probs=22.6
Q ss_pred ccccCCCCCCCCccccccCCEEEEcee
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
.+.|+|.+..+.+|.|++||+|.|...
T Consensus 7 ~al~dy~~~~~~eLs~~~Gd~i~v~~~ 33 (61)
T 1y0m_A 7 KALFDYKAQREDELTFTKSAIIQNVEK 33 (61)
T ss_dssp EESSCBCCCSTTBCCBCTTCEEEEEEC
T ss_pred EECcCCCcCCCCCcCCcCCCEEEEEEe
Confidence 457889999999999999999887443
No 402
>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=73.17 E-value=3.1 Score=29.05 Aligned_cols=27 Identities=22% Similarity=0.620 Sum_probs=22.5
Q ss_pred ccccCCCCCCCCccccccCCEEEEcee
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
.+.|+|.+..+.+|.|+.||+|.|...
T Consensus 9 ~al~dy~~~~~~eLs~~~Gd~i~v~~~ 35 (62)
T 1k4u_S 9 EALFSYEATQPEDLEFQEGDIILVLSK 35 (62)
T ss_dssp ECCSCBCCCSSSBCCBCSSCEEEEEEE
T ss_pred EECCCCCcCCCCCccCCCCCEEEEEEe
Confidence 456889999999999999999887443
No 403
>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A
Probab=72.57 E-value=2.8 Score=28.71 Aligned_cols=27 Identities=26% Similarity=0.569 Sum_probs=22.4
Q ss_pred ccccCCCCCCCCccccccCCEEEEcee
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
.+.|+|.+..+.+|.|+.||+|.|...
T Consensus 7 ~al~dy~~~~~~eLs~~~Gd~i~v~~~ 33 (58)
T 2drm_A 7 KALYDYDAQTGDELTFKEGDTIIVHQK 33 (58)
T ss_dssp EESSCBCCCSTTBCCBCTTCEEEEEEC
T ss_pred EECccCCCCCcCCcCCCCCCEEEEEEe
Confidence 356889999999999999999887443
No 404
>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A
Probab=72.16 E-value=3 Score=28.58 Aligned_cols=26 Identities=23% Similarity=0.710 Sum_probs=21.9
Q ss_pred ccccCCCCCCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|.+..+.+|.|++||+|.|-.
T Consensus 5 ~al~dy~~~~~~eLs~~~Gd~i~v~~ 30 (57)
T 1cka_A 5 RALFDFNGNDEEDLPFKKGDILRIRD 30 (57)
T ss_dssp EESSCBCCSSTTBCCBCTTCEEEEEE
T ss_pred EECCcCCCCCCCCCCCCCCCEEEEEE
Confidence 35688999999999999999987733
No 405
>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A
Probab=72.14 E-value=3.3 Score=28.52 Aligned_cols=26 Identities=15% Similarity=0.654 Sum_probs=21.9
Q ss_pred cccCCCCCCCCccccccCCEEEEcee
Q psy9829 122 THFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 122 ~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
+.|+|.+..+.+|.|++||+|.|...
T Consensus 7 al~dy~~~~~~eLs~~~Gd~i~v~~~ 32 (58)
T 1zx6_A 7 ALYQFDPQQDGDLGLKPGDKVQLLEK 32 (58)
T ss_dssp ECSCBCCCSTTBCCBCTTCEEEEEEE
T ss_pred ECceECCCCCCCccCCCCCEEEEEEe
Confidence 56889999999999999999887443
No 406
>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A
Probab=72.09 E-value=3.3 Score=28.63 Aligned_cols=27 Identities=44% Similarity=0.785 Sum_probs=22.3
Q ss_pred ccccCCCCCCCCccccccCCEEEEcee
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
.+.|+|.+..+.+|.|++||+|.|...
T Consensus 8 ~al~dy~~~~~~eLs~~~Gd~i~v~~~ 34 (59)
T 2g6f_X 8 RAKFNFQQTNEDELSFSKGDVIHVTRV 34 (59)
T ss_dssp EESSCBCCSSTTBCCBCTTCEEEEEEE
T ss_pred EECceeCCCCcCCcCCCCCCEEEEEEe
Confidence 356889999999999999999877443
No 407
>1w1f_A Tyrosine-protein kinase LYN; SH3-domain, SH3 domain, tyrosine kinase, signal transduction; NMR {Homo sapiens} PDB: 1wa7_A
Probab=72.03 E-value=3.2 Score=29.12 Aligned_cols=28 Identities=25% Similarity=0.605 Sum_probs=23.1
Q ss_pred ccccCCCCCCCCccccccCCEEEEceee
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVIDTL 148 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd~d 148 (333)
.+.|+|.+..+.+|.|+.||+|.|...+
T Consensus 11 ~al~dy~~~~~~eLs~~~Gd~i~v~~~~ 38 (65)
T 1w1f_A 11 VALYPYDGIHPDDLSFKKGEKMKVLEEH 38 (65)
T ss_dssp EESSCBCCCSSSCCCBCTTCEEEEEEEC
T ss_pred EEceeECCcCCCcCCCCCCCEEEEEEcC
Confidence 3568899999999999999998885544
No 408
>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A
Probab=71.80 E-value=3.2 Score=29.59 Aligned_cols=26 Identities=19% Similarity=0.441 Sum_probs=22.2
Q ss_pred ccccCCCCCCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|.+..+.+|.|+.||+|.|-.
T Consensus 11 ~Alydy~~~~~~eLsf~~Gd~i~v~~ 36 (68)
T 1tg0_A 11 VAQFPYKSDYEDDLNFEKDQEIIVTS 36 (68)
T ss_dssp EESSCBCCSCTTBCCBCTTCEEEEEE
T ss_pred EECeeECcCCcCCCCCCCCCEEEEEE
Confidence 45789999999999999999987743
No 409
>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}
Probab=71.65 E-value=3.4 Score=28.65 Aligned_cols=28 Identities=25% Similarity=0.569 Sum_probs=23.0
Q ss_pred cccccCCCCCCCCccccccCCEEEEcee
Q psy9829 120 HLTHFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 120 ~a~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
+.+.|+|.+..+.+|.|+.||+|.|...
T Consensus 8 ~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 35 (60)
T 2xmf_A 8 CKALYAYDAQDTDELSFNANDIIDIIKE 35 (60)
T ss_dssp EEESSCBCCSSTTBCCBCTTCEEEEEEE
T ss_pred EEECccCCcCCcCCcCCCCCCEEEEEEe
Confidence 3457889999999999999999887444
No 410
>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A
Probab=71.62 E-value=3.4 Score=28.18 Aligned_cols=27 Identities=22% Similarity=0.391 Sum_probs=22.3
Q ss_pred ccccCCCCCCCCccccccCCEEEEcee
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
.+.|+|.+....+|.|++||+|.|...
T Consensus 5 ~al~dy~~~~~~eLs~~~Gd~i~v~~~ 31 (58)
T 4e6r_A 5 FVXFAYVAEREDELSLVXGSRVTVMEX 31 (58)
T ss_dssp EECSCBCCCSTTBCCBCTTCEEEEEEE
T ss_pred EECccCCCCCCCEeeEeCCCEEEEeEc
Confidence 456889999999999999999887433
No 411
>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}
Probab=71.56 E-value=3.5 Score=28.29 Aligned_cols=27 Identities=11% Similarity=0.476 Sum_probs=22.1
Q ss_pred ccccCCCCCCCCccccccCCEEEEcee
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
.+.|+|.+..+.+|.|++||.|.|...
T Consensus 5 ~al~d~~~~~~~eLs~~~Gd~i~v~~~ 31 (59)
T 1yn8_A 5 VALYDFEPENDNELRLAEGDIVFISYK 31 (59)
T ss_dssp EECSCBCCCSTTBCCBCTTCEEEEEEE
T ss_pred EECccCCCCCCCCcCCCCCCEEEEEEc
Confidence 356888888899999999999877443
No 412
>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A
Probab=71.46 E-value=3.4 Score=28.66 Aligned_cols=28 Identities=25% Similarity=0.520 Sum_probs=23.0
Q ss_pred cccccCCCCCCCCccccccCCEEEEcee
Q psy9829 120 HLTHFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 120 ~a~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
+.+.|+|.+..+.+|.|+.||+|.|-..
T Consensus 7 ~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 34 (60)
T 1w70_A 7 AEALFDFTGNSKLELNFKAGDVIFLLSR 34 (60)
T ss_dssp EEESSCBCCSSTTBCCBCTTCEEEEEEE
T ss_pred EEECccCCcCCCCCccCCCCCEEEEEEe
Confidence 3457889999999999999999887443
No 413
>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A
Probab=70.82 E-value=3.3 Score=28.48 Aligned_cols=25 Identities=28% Similarity=0.563 Sum_probs=21.4
Q ss_pred ccccCCCCCCCCccccccCCEEEEc
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVI 145 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vn 145 (333)
.+.|+|.+..+.+|.|+.||+|.|.
T Consensus 4 ~al~dy~~~~~~eLs~~~Gd~i~v~ 28 (58)
T 1jo8_A 4 TAEYDYDAAEDNELTFVENDKIINI 28 (58)
T ss_dssp EESSCBCCCSTTBCCBCTTCEEEEE
T ss_pred EECceECCCCCCCcccCCCCEEEEE
Confidence 3568899999999999999998873
No 414
>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A
Probab=70.79 E-value=3.3 Score=28.37 Aligned_cols=26 Identities=35% Similarity=0.856 Sum_probs=21.8
Q ss_pred ccccCCCCCCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|.+..+.+|.|++||+|.|..
T Consensus 6 ~al~dy~~~~~~eLs~~~Gd~i~v~~ 31 (58)
T 1sem_A 6 QALFDFNPQESGELAFKRGDVITLIN 31 (58)
T ss_dssp EESSCBCCSSTTBCCBCTTCEEEEEE
T ss_pred EECcCCCCCCCCCcCCCCCCEEEEEE
Confidence 35688999999999999999988743
No 415
>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.79 E-value=3.7 Score=29.33 Aligned_cols=27 Identities=19% Similarity=0.374 Sum_probs=22.8
Q ss_pred ccccCCCCCCCCccccccCCEEEEcee
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
.+.|+|....+.+|.|+.||+|.|...
T Consensus 11 ~al~dy~~~~~~eLs~~~Gd~i~v~~~ 37 (68)
T 2dmo_A 11 RVLFGFVPETKEELQVMPGNIVFVLKK 37 (68)
T ss_dssp EECSSCCCCSSSSCCCCTTCEEEECEE
T ss_pred EECcCCCcCCcCCCCCCCCCEEEEEEe
Confidence 457899999999999999999988443
No 416
>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1
Probab=70.66 E-value=3.2 Score=29.60 Aligned_cols=26 Identities=23% Similarity=0.710 Sum_probs=22.3
Q ss_pred ccccCCCCCCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|.+..+.+|.|+.||+|.|..
T Consensus 7 ~Alydy~~~~~~eLsf~~Gd~i~v~~ 32 (65)
T 1b07_A 7 RALFDFNGNDEEDLPFKKGDILRIRD 32 (65)
T ss_dssp EESSCBCCSSTTBCCBCTTCEEEEEE
T ss_pred EECCcCCCCCCCccCCcCCCEEEEEE
Confidence 45789999999999999999988743
No 417
>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A
Probab=70.12 E-value=3.5 Score=28.29 Aligned_cols=26 Identities=31% Similarity=0.727 Sum_probs=21.7
Q ss_pred ccccCCCCCCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|.+..+.+|.|++||+|.|..
T Consensus 5 ~al~dy~~~~~~eLs~~~Gd~i~v~~ 30 (58)
T 1uti_A 5 RALYDFEALEEDELGFRSGEVVEVLD 30 (58)
T ss_dssp EESSCBCCCSTTBCCBCTTCEEEEEE
T ss_pred EECccCCCCCcCCCCCCCCCEEEEEE
Confidence 35688999999999999999988733
No 418
>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A
Probab=69.96 E-value=3.4 Score=28.94 Aligned_cols=26 Identities=46% Similarity=0.815 Sum_probs=21.9
Q ss_pred ccccCCCCCCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|.+..+.+|.|++||+|.|..
T Consensus 10 ~al~dy~~~~~~eLs~~~Gd~i~v~~ 35 (64)
T 2ak5_A 10 RAKFNFQQTNEDELSFSKGDVIHVTR 35 (64)
T ss_dssp EESSCBCCCSTTBCCBCTTCEEEEEE
T ss_pred EEccccCCcCcCcccCCCCCEEEEeE
Confidence 45688999999999999999988743
No 419
>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D
Probab=69.95 E-value=3 Score=28.78 Aligned_cols=24 Identities=33% Similarity=0.661 Sum_probs=21.4
Q ss_pred ccccCCCCCCCCccccccCCEEEE
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHV 144 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~V 144 (333)
.+.|+|.+..+.+|.|+.||.|.|
T Consensus 7 ~al~dy~~~~~~eLs~~~Gd~i~v 30 (60)
T 2x3w_D 7 RALYDYDGQEQDELSFKAGDELTK 30 (60)
T ss_dssp EECSCBCCSSSSBCCBCTTCEEEE
T ss_pred EECcccCccCCCcccCCCCCEEEE
Confidence 456889999999999999999988
No 420
>2lx7_A GAS-7, growth arrest-specific protein 7; structural genomics, northeast structural genomics consortiu target HR8574A, PSI-biology; NMR {Homo sapiens}
Probab=69.95 E-value=2.8 Score=29.98 Aligned_cols=26 Identities=15% Similarity=0.510 Sum_probs=21.1
Q ss_pred cccccCCCCCCCCc-cccccCCEEEEc
Q psy9829 120 HLTHFNYDQPEKGE-MSFRKGDVFHVI 145 (333)
Q Consensus 120 ~a~~~~~~gpa~g~-l~lr~gD~I~Vn 145 (333)
+++.|+|++..+.+ |.|++||.|.|.
T Consensus 6 ~rAlydy~~~~~~e~Ls~~~Gd~i~v~ 32 (60)
T 2lx7_A 6 CRTLYPFSGERHGQGLRFAAGELITLL 32 (60)
T ss_dssp EEESCCCCSCCCSSCCCCCTTCEEEBS
T ss_pred EEECcccCCCCCCCCccCCCCCEEEEe
Confidence 34678898877776 999999999883
No 421
>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=69.72 E-value=2.8 Score=30.54 Aligned_cols=27 Identities=37% Similarity=0.756 Sum_probs=22.7
Q ss_pred ccccCCCCCCCCccccccCCEEEEcee
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
.+.|+|....+.+|.|++||+|.|...
T Consensus 11 ~alydy~~~~~~eLs~~~Gd~i~v~~~ 37 (77)
T 2d8j_A 11 VALFDYQARTAEDLSFRAGDKLQVLDT 37 (77)
T ss_dssp EESSCBCCSSSSBCCBCTTCCEEEEEC
T ss_pred EEccCCCCCCCCccCCCCCCEEEEEEC
Confidence 456899999999999999999888444
No 422
>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}
Probab=69.56 E-value=3.5 Score=29.47 Aligned_cols=26 Identities=19% Similarity=0.497 Sum_probs=22.0
Q ss_pred ccccCCCCCCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|.+..+.+|.|+.||+|.|..
T Consensus 5 ~alydy~~~~~~eLs~~~Gd~i~v~~ 30 (65)
T 2nwm_A 5 RLKFDFQAQSPKELTLQKGDIVYIHK 30 (65)
T ss_dssp EECSCBCCCSTTBCCBCTTCEEEEEE
T ss_pred EEeeeECCCCcCccCCcCCCEEEEEE
Confidence 45688999999999999999988733
No 423
>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*
Probab=69.40 E-value=4 Score=28.45 Aligned_cols=25 Identities=16% Similarity=0.234 Sum_probs=21.4
Q ss_pred ccccCCCCCCCCccccccCCEEEEc
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVI 145 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vn 145 (333)
.+.|+|....+.+|.|++||+|.|.
T Consensus 7 ~al~~y~~~~~~eLs~~~Gd~i~v~ 31 (62)
T 2fpe_A 7 RAIFRFVPRHEDELELEVDDPLLVE 31 (62)
T ss_dssp EECSCBCCSSTTBCCBCTTCEEEEE
T ss_pred EECccCCccCcCcCcCCCCCEEEEE
Confidence 4568899999999999999998873
No 424
>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens}
Probab=68.94 E-value=3 Score=29.84 Aligned_cols=26 Identities=19% Similarity=0.489 Sum_probs=22.3
Q ss_pred ccccCCCCCCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|.+..+.+|.|+.||+|.|-.
T Consensus 5 ~Alydy~~~~~~eLs~~~Gd~i~v~~ 30 (65)
T 2fei_A 5 KVLFEYIPQNEDELELKVGDIIDINE 30 (65)
T ss_dssp ECSSCCCCCSTTBCCCCTTCEEECCC
T ss_pred EECccCCcCCcCccCCCCCCEEEEEE
Confidence 45789999999999999999998833
No 425
>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A
Probab=68.52 E-value=3.1 Score=30.12 Aligned_cols=27 Identities=22% Similarity=0.599 Sum_probs=22.7
Q ss_pred ccccCCCCCCCCccccccCCEEEEcee
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
.+.|+|.+..+.+|.|+.||+|.|...
T Consensus 6 ~Alydy~a~~~~eLs~~~Gd~i~vl~~ 32 (69)
T 2ydl_A 6 KVIFPYEAQNDDELTIKEGDIVTLINK 32 (69)
T ss_dssp EESSCBCCCSTTBCCBCTTCEEEEEES
T ss_pred EEcccCCCCCCCccccCCCCEEEEEEc
Confidence 356899999999999999999888443
No 426
>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=68.48 E-value=3.9 Score=29.20 Aligned_cols=26 Identities=15% Similarity=0.585 Sum_probs=22.1
Q ss_pred ccccCCCCCCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|.+..+.+|.|++||+|.|..
T Consensus 11 ~al~dy~~~~~~eLs~~~Gd~i~v~~ 36 (68)
T 2dl4_A 11 VALYKFVPQENEDLEMRPGDIITLLE 36 (68)
T ss_dssp EESSCCCCSSTTBCCCCTTCEEEEEE
T ss_pred EEeeeECCCCcCCcCCCCCCEEEEEE
Confidence 35689999999999999999988733
No 427
>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}
Probab=68.41 E-value=4.1 Score=29.34 Aligned_cols=26 Identities=19% Similarity=0.698 Sum_probs=22.0
Q ss_pred ccccCCCCCCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|.+..+.+|.|+.||+|.|..
T Consensus 7 ~Alydy~~~~~~eLsf~~Gd~i~v~~ 32 (68)
T 2ew3_A 7 RGLYDFEPENQGELGFKEGDIITLTN 32 (68)
T ss_dssp EESSCBCCCSTTBCCBCTTCEEEEEE
T ss_pred EEeeeECCCCCCccCCCCCCEEEEEE
Confidence 35688999999999999999988744
No 428
>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A
Probab=68.33 E-value=4.2 Score=28.39 Aligned_cols=27 Identities=19% Similarity=0.610 Sum_probs=22.6
Q ss_pred ccccCCCCCCCCccccccCCEEEEcee
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
.+.|+|.+..+.+|.|+.||+|.|...
T Consensus 5 ~al~dy~~~~~~eLs~~~Gd~i~v~~~ 31 (62)
T 2j6f_A 5 IVEYDYDAVHDDELTIRVGEIIRNVKK 31 (62)
T ss_dssp EECSCBCCSSTTBCCBCTTCEEEEEEE
T ss_pred EECccCCcCCcCCcCCcCCCEEEEEEe
Confidence 457899999999999999999877443
No 429
>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=68.28 E-value=4.3 Score=29.84 Aligned_cols=26 Identities=23% Similarity=0.732 Sum_probs=22.4
Q ss_pred ccccCCCCCCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|.+..+.+|.|+.||+|.|..
T Consensus 21 ~Alydy~a~~~~eLsf~~Gd~i~Vl~ 46 (72)
T 2l0a_A 21 RAIYDFEAAEDNELTFKAGEIITVLD 46 (72)
T ss_dssp EESSCBCCSSTTBCCBCTTCEEEEEE
T ss_pred EECCccCCCCCCccCCCCCCEEEEEE
Confidence 45789999999999999999988743
No 430
>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}
Probab=68.19 E-value=3.3 Score=29.58 Aligned_cols=26 Identities=31% Similarity=0.599 Sum_probs=22.0
Q ss_pred ccccCCCCCCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|.+..+.+|.|+.||+|.|..
T Consensus 7 ~alydy~~~~~~eLs~~~Gd~i~v~~ 32 (69)
T 1wyx_A 7 KALYDNVAESPDELSFRKGDIMTVLE 32 (69)
T ss_dssp EESSCBCCSSTTBCCBCTTCEEEEEE
T ss_pred EECccCCcCCCCccCCcCCCEEEEeE
Confidence 35688999999999999999988733
No 431
>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A
Probab=68.13 E-value=3.4 Score=28.95 Aligned_cols=25 Identities=36% Similarity=0.794 Sum_probs=21.7
Q ss_pred ccccCCCCCCCCccccccCCEEEEc
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVI 145 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vn 145 (333)
.+.|+|.+....+|.|+.||+|.|.
T Consensus 10 ~al~dy~~~~~~eLs~~~Gd~i~v~ 34 (64)
T 2jte_A 10 RTLFPYTGTNEDELTFREGEIIHLI 34 (64)
T ss_dssp EESSCBCCSSSSBCCBCTTCEEEEE
T ss_pred EECccCCccCCCccCCCCCCEEEEE
Confidence 4568899999999999999998873
No 432
>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A
Probab=67.86 E-value=3.7 Score=29.98 Aligned_cols=26 Identities=23% Similarity=0.418 Sum_probs=22.5
Q ss_pred cccccCCCCCCCCccccccCCEEEEc
Q psy9829 120 HLTHFNYDQPEKGEMSFRKGDVFHVI 145 (333)
Q Consensus 120 ~a~~~~~~gpa~g~l~lr~gD~I~Vn 145 (333)
+.+.|+|.+..+.+|.|+.||+|.|-
T Consensus 13 ~~alydy~~~~~~eLsf~~Gd~i~v~ 38 (76)
T 2ed1_A 13 VKTIYDCQADNDDELTFIEGEVIIVT 38 (76)
T ss_dssp EEESSCCCCSSSSBCCCCSSCEEEES
T ss_pred EEECccCCCCCcCCcCcCCCCEEEEE
Confidence 34678999999999999999999883
No 433
>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A
Probab=67.86 E-value=3.4 Score=28.55 Aligned_cols=26 Identities=31% Similarity=0.804 Sum_probs=21.9
Q ss_pred ccccCCCCCCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|.+....+|.|+.||+|.|..
T Consensus 7 ~al~dy~~~~~~eLs~~~Gd~i~v~~ 32 (60)
T 1oot_A 7 VALYSFAGEESGDLPFRKGDVITILK 32 (60)
T ss_dssp EESSCBCCCSTTBCCBCTTCEEEEEE
T ss_pred EECccCCcCCcCEeeEcCCCEEEEEE
Confidence 45688999999999999999987733
No 434
>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A
Probab=67.62 E-value=4.5 Score=28.62 Aligned_cols=27 Identities=33% Similarity=0.679 Sum_probs=22.5
Q ss_pred cccccCCCCCCCCccccccCCEEEEce
Q psy9829 120 HLTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 120 ~a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
+.+.|+|.+..+.+|.|++||+|.|-.
T Consensus 9 ~~al~dy~~~~~~eLs~~~Gd~i~v~~ 35 (67)
T 2o9s_A 9 AIAKFNFNGDTQVEMSFRKGERITLLR 35 (67)
T ss_dssp EEECSCBCCSSTTBCCBCTTCEEEEEE
T ss_pred EEECccCCcCCcCccCCCCCCEEEEEE
Confidence 345789999999999999999987733
No 435
>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=67.47 E-value=3.5 Score=29.59 Aligned_cols=28 Identities=36% Similarity=0.689 Sum_probs=23.6
Q ss_pred ccccCCCCCCCCccccccCCEEEEceeec
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVIDTLH 149 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd~dv 149 (333)
.+.|+|.+..+.+|.|+.||+|.| ..+-
T Consensus 14 ~alydy~~~~~~eLs~~~Gd~i~v-~~~~ 41 (72)
T 2kgt_A 14 VGLWDFKSRTDEELSFRAGDVFHV-ARKE 41 (72)
T ss_dssp ECCTTCBCSSTTSCBCCTTCCEEE-EEEC
T ss_pred EEcccCCCCCcCCcCCCCCCEEEE-eeCC
Confidence 456899999999999999999988 6643
No 436
>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A
Probab=67.44 E-value=4.3 Score=27.75 Aligned_cols=26 Identities=46% Similarity=0.981 Sum_probs=21.8
Q ss_pred ccccCCCCCCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|....+.+|.|++||+|.|..
T Consensus 6 ~al~dy~~~~~~eLs~~~Gd~i~v~~ 31 (58)
T 2vwf_A 6 QALFDFDPQEDGELGFRRGDFIHVMD 31 (58)
T ss_dssp EESSCBCCCSTTBCCBCTTCEEEEEE
T ss_pred EECceECCCCcCCcCCCCCCEEEEEE
Confidence 35688999999999999999988733
No 437
>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A
Probab=67.38 E-value=4.8 Score=28.01 Aligned_cols=27 Identities=19% Similarity=0.455 Sum_probs=22.2
Q ss_pred cccccCCCCCCCCccccccCCEEEEce
Q psy9829 120 HLTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 120 ~a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
+.+.|+|.+..+.+|.|+.||+|.|..
T Consensus 10 ~~al~dy~~~~~~eLs~~~Gd~i~v~~ 36 (65)
T 3u23_A 10 CKVLFEYIPQNEDELELKVGDIIDINE 36 (65)
T ss_dssp EEECSCBCCSSTTBCCBCTTCEEEEEE
T ss_pred EEEeeeeCCCCcCCcCCCCCCEEEEEE
Confidence 345688999999999999999987743
No 438
>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1
Probab=67.33 E-value=4.3 Score=28.36 Aligned_cols=26 Identities=23% Similarity=0.705 Sum_probs=21.7
Q ss_pred ccccCCCCCCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|.+..+.+|.|+.||+|.|-.
T Consensus 9 ~al~dy~~~~~~eLs~~~Gd~i~v~~ 34 (62)
T 1uj0_A 9 RALYDFEAVEDNELTFKHGELITVLD 34 (62)
T ss_dssp EESSCBCCCSTTBCCBCTTCEEEEEE
T ss_pred EECccCCCCCcCCcCCCCCCEEEEEE
Confidence 35688999999999999999988733
No 439
>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}
Probab=67.28 E-value=3.8 Score=30.35 Aligned_cols=27 Identities=11% Similarity=0.338 Sum_probs=22.8
Q ss_pred ccccCCCCCCCCccccccCCEEEEcee
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
.+.|+|.+..+.+|.|+.||+|.|-..
T Consensus 14 ~alydy~~~~~~eLsf~~Gd~i~v~~~ 40 (80)
T 2i0n_A 14 RALKDYNVSDTSLLPFKRNDIITITFK 40 (80)
T ss_dssp EESSCBCCCSSSSCCBCSSEEEEEEEE
T ss_pred EECCCCCcCCCCCcCCCCCCEEEEEEe
Confidence 457899999999999999999877444
No 440
>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A
Probab=67.24 E-value=4.8 Score=27.45 Aligned_cols=27 Identities=19% Similarity=0.475 Sum_probs=21.2
Q ss_pred cccCC-CCCCCCccccccCCEEEEceee
Q psy9829 122 THFNY-DQPEKGEMSFRKGDVFHVIDTL 148 (333)
Q Consensus 122 ~~~~~-~gpa~g~l~lr~gD~I~Vnd~d 148 (333)
+.|+| .+....+|.|++||+|.|...+
T Consensus 5 al~d~~~~~~~~eLs~~~Gd~i~v~~~~ 32 (58)
T 1zuy_A 5 AAYDFPGSGSPSELPLKKGDVIYITREE 32 (58)
T ss_dssp ESSCBCCCSCTTBCCBCTTCEEEEEEEC
T ss_pred EecccCCCCCCCcCCCCCCCEEEEEEec
Confidence 46788 6778889999999998774443
No 441
>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A
Probab=67.14 E-value=4.9 Score=29.02 Aligned_cols=26 Identities=23% Similarity=0.584 Sum_probs=22.2
Q ss_pred ccccCCCCCCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|.+..+.+|.|++||+|.|.+
T Consensus 10 ~Alydy~a~~~~ELs~~~Gd~i~v~~ 35 (65)
T 2lj0_A 10 QALYSYIPQNDDELELRDGDIVDVME 35 (65)
T ss_dssp EESSCBCCSSTTBCCBCTTCEEEEEE
T ss_pred EEceeECCCCcCCcCCCCCCEEEEeE
Confidence 45689999999999999999988743
No 442
>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}
Probab=66.82 E-value=4.6 Score=27.75 Aligned_cols=26 Identities=19% Similarity=0.535 Sum_probs=21.8
Q ss_pred ccccCCCCCCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|.+..+.+|.|+.||+|.|..
T Consensus 7 ~al~dy~~~~~~eLs~~~Gd~i~v~~ 32 (58)
T 1zlm_A 7 RALYTFEPRTPDELYFEEGDIIYITD 32 (58)
T ss_dssp EESSCBCCSSTTBCCBCTTCEEEEEE
T ss_pred EECccCCCCCCCCccCCCCCEEEEEE
Confidence 35688999999999999999987733
No 443
>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.72 E-value=4.9 Score=28.97 Aligned_cols=27 Identities=26% Similarity=0.536 Sum_probs=22.4
Q ss_pred ccccCCCCCCCCccccccCCEEEEcee
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
.+.|+|.+....+|.|+.||+|.|...
T Consensus 13 ~al~dy~~~~~~eLs~~~Gd~i~v~~~ 39 (72)
T 2dl8_A 13 IAKFDYVGRTARELSFKKGASLLLYQR 39 (72)
T ss_dssp EESSCBCCSSSSBCCBCTTCEEEEEEE
T ss_pred EECccCCcCCCCEeccCCCCEEEEEee
Confidence 456889999999999999999877443
No 444
>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=66.66 E-value=4.6 Score=29.64 Aligned_cols=27 Identities=11% Similarity=0.261 Sum_probs=22.4
Q ss_pred ccccCCCCCCCCccccccCCEEEEcee
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
.+.|+|....+.+|.|++||+|.|...
T Consensus 11 ~al~dy~~~~~~eLs~~~Gd~i~v~~~ 37 (80)
T 1ue9_A 11 QVTSAYVASGSEQLSLAPGQLILILKK 37 (80)
T ss_dssp EECSCCCCCSTTBCCCCTTCEEEEEEE
T ss_pred EECcccCCCCCCCCCCCCCCEEEEEEe
Confidence 356889999999999999999887444
No 445
>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=66.49 E-value=3.4 Score=29.50 Aligned_cols=27 Identities=19% Similarity=0.518 Sum_probs=22.7
Q ss_pred cccccCCCCCCCCccccccCCEEEEce
Q psy9829 120 HLTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 120 ~a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
+.+.|+|....+.+|.|+.||+|.|..
T Consensus 10 ~~alydy~~~~~~eLs~~~Gd~i~v~~ 36 (69)
T 2eqi_A 10 VKALYDYKAKRSDELTFCRGALIHNVS 36 (69)
T ss_dssp EEESSCBCCCSSSCCCBCTTCEEESCC
T ss_pred EEECeeECCCCcCccCCCCCCEEEEEE
Confidence 345789999999999999999998843
No 446
>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A
Probab=66.35 E-value=4.6 Score=28.15 Aligned_cols=25 Identities=20% Similarity=0.687 Sum_probs=21.4
Q ss_pred cccCCCCCCCCccccccCCEEEEce
Q psy9829 122 THFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 122 ~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
+.|+|.+....+|.|++||+|.|..
T Consensus 6 alydy~~~~~~eLs~~~Gd~i~v~~ 30 (65)
T 2oaw_A 6 ALYDYQEKSPREVTMKKGDILTLLN 30 (65)
T ss_dssp ECSCBCCSSTTBCCBCTTCEEEEEE
T ss_pred EcccCCccCCCCCCCCCCCEEEEEE
Confidence 5688999999999999999988733
No 447
>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}
Probab=66.33 E-value=4.9 Score=29.09 Aligned_cols=28 Identities=21% Similarity=0.650 Sum_probs=23.4
Q ss_pred cccccCCCCCCCCccccccCCEEEEcee
Q psy9829 120 HLTHFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 120 ~a~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
+.+.|+|.+..+.+|.|+.||+|.|...
T Consensus 16 ~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 43 (73)
T 3c0c_A 16 CKALYDFEPENDGELGFREGDLITLTNQ 43 (73)
T ss_dssp EEESSCBCCSSTTBCCBCTTCEEEEEEE
T ss_pred EEECccCCCCCCCCccCcCCCEEEEEEe
Confidence 4567899999999999999999887443
No 448
>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A
Probab=66.30 E-value=3.9 Score=28.15 Aligned_cols=26 Identities=15% Similarity=0.569 Sum_probs=21.7
Q ss_pred ccccCCCCCCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|......+|.|++||.|.|..
T Consensus 6 ~al~dy~~~~~~eLs~~~Gd~i~v~~ 31 (60)
T 2v1q_A 6 IVQYDFMAESQDELTIKSGDKVYILD 31 (60)
T ss_dssp EECSCBCCCSTTBCCBCTTCEEEEEE
T ss_pred EEeeeECCCCCCCccCCCCCEEEEEe
Confidence 35688898999999999999988733
No 449
>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.28 E-value=4.3 Score=30.57 Aligned_cols=27 Identities=22% Similarity=0.647 Sum_probs=22.9
Q ss_pred cccccCCCCCCCCccccccCCEEEEce
Q psy9829 120 HLTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 120 ~a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
+.+.|+|.+..+.+|.|+.||+|.|..
T Consensus 20 ~~Alydy~~~~~~eLsf~~Gd~i~v~~ 46 (88)
T 1x2q_A 20 VRALYDFEAVEDNELTFKHGEIIIVLD 46 (88)
T ss_dssp EEESSCCCCCSSSCCCCCSSCEEEEEE
T ss_pred EEEcccCCCCCcCccCCCCCCEEEEEE
Confidence 346789999999999999999988843
No 450
>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}
Probab=66.20 E-value=5.1 Score=29.26 Aligned_cols=28 Identities=11% Similarity=0.450 Sum_probs=23.0
Q ss_pred cccccCCCCCCCCccccccCCEEEEcee
Q psy9829 120 HLTHFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 120 ~a~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
+.+.|+|.+..+.+|.|+.||.|.|...
T Consensus 8 ~~Alydy~a~~~~eLs~~~Gd~i~v~~~ 35 (73)
T 2lcs_A 8 AVALYDFEPENDNELRLAEGDIVFISYK 35 (73)
T ss_dssp EEESSCBCCSSTTBCCBCTTCEEEEEEE
T ss_pred EEECccCCCCCCCccCCcCCCEEEEEEE
Confidence 3457899999999999999999887443
No 451
>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A
Probab=66.04 E-value=4.7 Score=28.19 Aligned_cols=26 Identities=23% Similarity=0.576 Sum_probs=21.8
Q ss_pred ccccCCCCCCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|.+..+.+|.|+.||+|.|..
T Consensus 13 ~al~dy~~~~~~eLs~~~Gd~i~v~~ 38 (65)
T 3ulr_B 13 IALYDYQAAGDDEISFDPDDIITNIE 38 (65)
T ss_dssp EECSCBCCCSTTBCCBCTTCEEEEEE
T ss_pred EEEeeECCCCcCEeeEecCCEEEEEE
Confidence 45688999999999999999988733
No 452
>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}
Probab=65.97 E-value=5 Score=28.50 Aligned_cols=27 Identities=19% Similarity=0.509 Sum_probs=22.4
Q ss_pred cccccCCCCCCCCccccccCCEEEEce
Q psy9829 120 HLTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 120 ~a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
+.+.|+|.+....+|.|+.||+|.|-.
T Consensus 9 ~~al~dy~~~~~~eLs~~~Gd~i~v~~ 35 (69)
T 4esr_A 9 VVALYDYTANRSDELTIHRGDIIRVFF 35 (69)
T ss_dssp EEESSCBCCCSTTBCCBCTTCEEEEEE
T ss_pred EEECccCCCCCcCcCCCCCCCEEEEEE
Confidence 345688999999999999999987733
No 453
>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.73 E-value=3.9 Score=29.58 Aligned_cols=26 Identities=19% Similarity=0.625 Sum_probs=22.0
Q ss_pred ccccCCCCCCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|.+..+.+|.|+.||+|.|..
T Consensus 12 ~alydy~~~~~~eLsf~~Gd~i~v~~ 37 (73)
T 2dl7_A 12 KALYDYEGQTDDELSFPEGAIIRILN 37 (73)
T ss_dssp EESSCBCCSSTTBCCBCTTCEEEEEE
T ss_pred EECccCCcCCCCcCCCCCCCEEEEEE
Confidence 35688999999999999999988733
No 454
>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A
Probab=65.54 E-value=5.7 Score=27.46 Aligned_cols=26 Identities=15% Similarity=0.459 Sum_probs=21.7
Q ss_pred ccccCCCCCCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|.+..+.+|.|++||+|.|..
T Consensus 9 ~al~dy~~~~~~eLs~~~Gd~i~v~~ 34 (63)
T 3eg3_A 9 VALYDFVASGDNTLSITKGEKLRVLG 34 (63)
T ss_dssp EESSCBCCCSSSBCCBCTTCEEEEEE
T ss_pred EEcceECCCCCCccCCCCCCEEEEEE
Confidence 34688899999999999999988743
No 455
>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=65.47 E-value=5.4 Score=28.56 Aligned_cols=27 Identities=22% Similarity=0.584 Sum_probs=22.7
Q ss_pred ccccCCCCCCCCccccccCCEEEEcee
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
.+.|+|.+....+|.|+.||+|.|...
T Consensus 12 ~al~dy~~~~~~eLs~~~Gd~i~v~~~ 38 (69)
T 1uhf_A 12 IALYPYSSVEPGDLTFTEGEEILVTQK 38 (69)
T ss_dssp ECSSCBCCSSSSBCCBCTTCEEEECEE
T ss_pred EEeeeECCCCcCccCCCCCCEEEEEEe
Confidence 357899999999999999999888444
No 456
>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=65.36 E-value=4.2 Score=27.80 Aligned_cols=26 Identities=19% Similarity=0.436 Sum_probs=21.8
Q ss_pred ccccCCCCCCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|.+..+.+|.|++||.|.|..
T Consensus 5 ~alydy~~~~~~eLs~~~Gd~i~v~~ 30 (58)
T 1zuu_A 5 KVLYAYVQKDDDEITITPGDKISLVA 30 (58)
T ss_dssp EECSCBCCCSTTBCCBCTTCCEEEEE
T ss_pred EEeeeECCcCCCcccCCCCCEEEEeE
Confidence 45688999999999999999987733
No 457
>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.27 E-value=5.3 Score=29.36 Aligned_cols=28 Identities=21% Similarity=0.507 Sum_probs=23.3
Q ss_pred cccccCCCCCCCCccccccCCEEEEcee
Q psy9829 120 HLTHFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 120 ~a~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
+.+.|+|......+|.|+.||+|.|...
T Consensus 20 ~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 47 (79)
T 1x69_A 20 AVALYDYQAAGDDEISFDPDDIITNIEM 47 (79)
T ss_dssp EEESSCCCCSSSSBCCCCTTCEEEEEEE
T ss_pred EEECccCCCCCCCCcCcCCCCEEEEeEe
Confidence 3457899999999999999999988444
No 458
>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus}
Probab=65.18 E-value=5.7 Score=28.21 Aligned_cols=27 Identities=19% Similarity=0.427 Sum_probs=22.4
Q ss_pred ccccCCCCCCCCccccccCCEEEEcee
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
.+.|+|....+.+|.|++||+|.|...
T Consensus 11 ~al~~y~~~~~~eLs~~~Gd~i~v~~~ 37 (70)
T 2cuc_A 11 VALHTYSAHRPEELDLQKGEGIRVLGK 37 (70)
T ss_dssp ECCSCBCCCSTTBCCBCTTCEEEEEEE
T ss_pred EECeeECcCCCCcCCCCCCCEEEEEEe
Confidence 456889999999999999999877443
No 459
>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}
Probab=65.17 E-value=4.8 Score=28.58 Aligned_cols=26 Identities=31% Similarity=0.531 Sum_probs=21.7
Q ss_pred ccccCCCCCCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|....+.+|.|+.||+|.|..
T Consensus 11 ~al~dy~~~~~~eLs~~~Gd~i~v~~ 36 (68)
T 2djq_A 11 KALCNYRGKNPGDLKFNKGDVILLRR 36 (68)
T ss_dssp EECSCCCSCCTTCCCCCTTCEEEEEE
T ss_pred EECCCCCCCCcCCccCCCCCEEEEEE
Confidence 45688898999999999999988733
No 460
>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=65.00 E-value=4.8 Score=28.62 Aligned_cols=26 Identities=19% Similarity=0.535 Sum_probs=21.9
Q ss_pred ccccCCCCCCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|....+.+|.|+.||+|.|.+
T Consensus 11 ~al~dy~~~~~~eLs~~~Gd~i~v~~ 36 (68)
T 1x2k_A 11 RALYTFEPRTPDELYFEEGDIIYITD 36 (68)
T ss_dssp EESSCCCCCSTTBCCCCSSCEEEEEE
T ss_pred EECceECCCCCCcccCCCCCEEEEEE
Confidence 35688999999999999999988743
No 461
>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}
Probab=64.88 E-value=5.5 Score=28.34 Aligned_cols=27 Identities=22% Similarity=0.495 Sum_probs=22.6
Q ss_pred ccccCCCCCCCCccccccCCEEEEcee
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
.+.|+|....+.+|.|+.||+|.|...
T Consensus 12 ~al~dy~~~~~~eLs~~~Gd~i~v~~~ 38 (69)
T 2dil_A 12 RALYDYTAQNPDELDLSAGDILEVILE 38 (69)
T ss_dssp ECCSCBCCSSSSSCCBCTTCEEEEEEC
T ss_pred EECccCCccCcCccCCCCCCEEEEEEC
Confidence 457889999999999999999888443
No 462
>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=64.84 E-value=5.3 Score=29.33 Aligned_cols=28 Identities=25% Similarity=0.609 Sum_probs=23.3
Q ss_pred cccccCCCCCCCCccccccCCEEEEcee
Q psy9829 120 HLTHFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 120 ~a~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
+.+.|+|....+.+|.|+.||+|.|...
T Consensus 20 ~~al~dy~~~~~~eLsf~~Gd~i~v~~~ 47 (78)
T 2ed0_A 20 VVAIYDYTKDKEDELSFQEGAIIYVIKK 47 (78)
T ss_dssp EEECSCBCCSSTTBCCBCSSCEEEEEEE
T ss_pred EEECccCCccCcCcccccCCCEEEEEEe
Confidence 3467899999999999999999887444
No 463
>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=64.78 E-value=4.9 Score=29.40 Aligned_cols=26 Identities=23% Similarity=0.648 Sum_probs=22.2
Q ss_pred ccccCCCCCCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|....+.+|.|+.||+|.|..
T Consensus 11 ~al~dy~~~~~~eLs~~~Gd~i~v~~ 36 (78)
T 2yuo_A 11 KALLDFERHDDDELGFRKNDIITIIS 36 (78)
T ss_dssp EESSCBCCSSTTBCCBCTTCEEEEEE
T ss_pred EECccCCCCCCCCccCCCCCEEEEEE
Confidence 45789999999999999999988743
No 464
>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.72 E-value=4.7 Score=28.66 Aligned_cols=27 Identities=22% Similarity=0.535 Sum_probs=22.3
Q ss_pred ccccCCCCCCCCccccccCCEEEEcee
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
.+.|+|....+.+|.|++||+|.|...
T Consensus 11 ~al~dy~~~~~~eLs~~~Gd~i~v~~~ 37 (70)
T 2ct3_A 11 RAMYQYRPQNEDELELREGDRVDVMQQ 37 (70)
T ss_dssp EESSCBCCSSTTBCCBCTTEEEEEEEE
T ss_pred EECccCCcCCcCCccCCCCCEEEEEEE
Confidence 356889999999999999999887443
No 465
>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A
Probab=64.64 E-value=4.3 Score=28.29 Aligned_cols=27 Identities=19% Similarity=0.692 Sum_probs=22.2
Q ss_pred ccccCCCCCCCCccccccCCEEEEcee
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
.+.|+|.+..+.+|.|+.||+|.|...
T Consensus 10 ~al~dy~~~~~~eLs~~~Gd~i~v~~~ 36 (62)
T 2iim_A 10 IALHSYEPSHDGDLGFEKGEQLRILEQ 36 (62)
T ss_dssp EESSCBCCCSTTBCCBCTTCEEEEEEC
T ss_pred EEcccCCCCCCCCcCCCCCCEEEEEEc
Confidence 356889999999999999999877443
No 466
>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A
Probab=64.26 E-value=5.2 Score=28.35 Aligned_cols=25 Identities=20% Similarity=0.511 Sum_probs=21.4
Q ss_pred ccccCCCCCCCCccccccCCEEEEc
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVI 145 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vn 145 (333)
.+.|+|....+.+|.|++||+|.|.
T Consensus 11 ~al~dy~~~~~~eLs~~~Gd~i~v~ 35 (68)
T 2dl3_A 11 RAKFDFKAQTLKELPLQKGDIVYIY 35 (68)
T ss_dssp EESSCBCCSSTTBCCBCTTCEEEEE
T ss_pred EECccCCCCCcCCccCCCCCEEEEe
Confidence 3568899999999999999998873
No 467
>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}
Probab=64.10 E-value=4.4 Score=29.24 Aligned_cols=27 Identities=22% Similarity=0.599 Sum_probs=22.5
Q ss_pred ccccCCCCCCCCccccccCCEEEEcee
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
.+.|+|.+..+.+|.|++||+|.|...
T Consensus 13 ~al~dy~~~~~~eLs~~~Gd~i~v~~~ 39 (73)
T 2k9g_A 13 KVIFPYEAQNDDELTIKEGDIVTLINK 39 (73)
T ss_dssp EECSCBCCSSTTBCCBCTTCEEEEEEC
T ss_pred EECccCCCCCCCeeeECCCCEEEEEEC
Confidence 356889999999999999999888443
No 468
>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.83 E-value=5.4 Score=28.29 Aligned_cols=26 Identities=15% Similarity=0.473 Sum_probs=21.9
Q ss_pred ccccCCCCCCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|....+.+|.|++||+|.|..
T Consensus 11 ~al~dy~~~~~~eLs~~~Gd~i~v~~ 36 (68)
T 1x2p_A 11 VAIADYAATDETQLSFLRGEKILILR 36 (68)
T ss_dssp EESSCCCCSSTTBCCCCTTCEEEEEE
T ss_pred EECceECCCCcCCcCCCCCCEEEEEE
Confidence 45688999999999999999988733
No 469
>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.77 E-value=5.4 Score=28.50 Aligned_cols=27 Identities=33% Similarity=0.477 Sum_probs=22.6
Q ss_pred ccccCCCCCCCCccccccCCEEEEcee
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
.+.|+|....+.+|.|+.||+|.|...
T Consensus 12 ~al~dy~~~~~~eLs~~~Gd~i~v~~~ 38 (71)
T 2dnu_A 12 VTVQPYTSQSKDEIGFEKGVTVEVIRK 38 (71)
T ss_dssp ECSSCBCCSSTTBCCBCTTCEEEECCC
T ss_pred EECCccCCCCCCCCcCCCCCEEEEeEC
Confidence 356889999999999999999988443
No 470
>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A
Probab=63.67 E-value=6 Score=27.85 Aligned_cols=26 Identities=38% Similarity=0.699 Sum_probs=21.7
Q ss_pred ccccCCCC-CCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQ-PEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~g-pa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|.. ....+|.|+.||+|.|..
T Consensus 9 ~alydy~~~~~~~eLs~~~Gd~i~v~~ 35 (65)
T 2j05_A 9 RAILPYTKVPDTDEISFLKGDMFIVHN 35 (65)
T ss_dssp EESSCBCCCTTSSBCCBCTTCEEEEEE
T ss_pred EEccccCCCCCCCcCcCCCCCEEEEeE
Confidence 45688998 888999999999987733
No 471
>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1
Probab=63.42 E-value=4.6 Score=28.95 Aligned_cols=26 Identities=23% Similarity=0.691 Sum_probs=22.2
Q ss_pred ccccCCCCCCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|.+..+.+|.|+.||+|.|..
T Consensus 15 ~alydy~~~~~~eLs~~~Gd~i~v~~ 40 (71)
T 1csk_A 15 IAKYNFHGTAEQDLPFCKGDVLTIVA 40 (71)
T ss_dssp EESSCBCCSSTTBCCBCTTCEEEEEE
T ss_pred EEceeECcCCCCcCCCCCCCEEEEeE
Confidence 45789999999999999999988743
No 472
>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A
Probab=63.42 E-value=4.9 Score=28.70 Aligned_cols=27 Identities=26% Similarity=0.637 Sum_probs=22.6
Q ss_pred ccccCCCCCCCCccccccCCEEEEcee
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
.+.|+|.+..+.+|.|+.||+|.|...
T Consensus 12 ~alydy~~~~~~eLs~~~Gd~i~v~~~ 38 (68)
T 2k2m_A 12 LCNYDFQARNSSELSVKQRDVLEVLDD 38 (68)
T ss_dssp EESSCBCCCSSSBCCBCTTCEEEEEEC
T ss_pred EECccCCCCCCCcccCCCCCEEEEEEc
Confidence 356899999999999999999887443
No 473
>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1
Probab=63.34 E-value=5.6 Score=28.17 Aligned_cols=26 Identities=8% Similarity=0.560 Sum_probs=22.0
Q ss_pred ccccCCCCCCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|.+..+.+|.|++||+|.|-.
T Consensus 6 ~al~dy~~~~~~eLs~~~Gd~i~v~~ 31 (67)
T 1gl5_A 6 VAMYDFQATEAHDLRLERGQEYIILE 31 (67)
T ss_dssp EECSCBCCSSSSBCCBCTTCEEEEEE
T ss_pred EECccCCCCCCCeecCCcCCEEEEEE
Confidence 35688999999999999999988733
No 474
>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=63.29 E-value=5.3 Score=28.97 Aligned_cols=28 Identities=14% Similarity=0.381 Sum_probs=23.0
Q ss_pred cccccCCCCCCCCccccccCCEEEEcee
Q psy9829 120 HLTHFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 120 ~a~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
+.+.|+|....+.+|.|++||+|.|...
T Consensus 13 ~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 40 (74)
T 1j3t_A 13 AQALCSWTAKKDNHLNFSKHDIITVLEQ 40 (74)
T ss_dssp EEESSCBCCCSTTBCCBCTTCEEEEEEE
T ss_pred EEECCCCCCCCCCccCCCCCCEEEEEec
Confidence 3457889999999999999999877444
No 475
>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.24 E-value=4.4 Score=29.58 Aligned_cols=24 Identities=38% Similarity=0.798 Sum_probs=20.9
Q ss_pred ccccCCCCCC-------CCccccccCCEEEE
Q psy9829 121 LTHFNYDQPE-------KGEMSFRKGDVFHV 144 (333)
Q Consensus 121 a~~~~~~gpa-------~g~l~lr~gD~I~V 144 (333)
.+.|+|+... +.+|.|+.||+|.|
T Consensus 11 ~Alydy~~~~~~~~~~~~~eLsf~~Gd~i~v 41 (75)
T 2ege_A 11 IAALDYDPGDGQMGGQGKGRLALRAGDVVMV 41 (75)
T ss_dssp EESSCBCTTTTCCCSSSCCBCCBCTTCEEEE
T ss_pred EECCCCCCCccccCCCCCCcceECCCCEEEE
Confidence 4578888888 88999999999988
No 476
>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A
Probab=63.09 E-value=5.1 Score=28.46 Aligned_cols=27 Identities=15% Similarity=0.161 Sum_probs=21.2
Q ss_pred ccccCCCCC--CCCccccccCCEEEEcee
Q psy9829 121 LTHFNYDQP--EKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 121 a~~~~~~gp--a~g~l~lr~gD~I~Vnd~ 147 (333)
.+.|+|.+. ...+|.|+.||+|.|-..
T Consensus 5 ~al~dy~~~~~~~~eLsf~~Gd~i~v~~~ 33 (67)
T 2bzy_A 5 KAIQKRVPCAYDKTALALEVGDIVKVTRM 33 (67)
T ss_dssp EECSCBCSEEECTTBCCBCTTCEEEEEEE
T ss_pred EEeeeECCCCCCCCccccCCCCEEEEEEe
Confidence 356888877 778999999999887443
No 477
>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A
Probab=62.98 E-value=4.8 Score=29.08 Aligned_cols=26 Identities=15% Similarity=0.526 Sum_probs=22.1
Q ss_pred cccCCCCCCCCccccccCCEEEEcee
Q psy9829 122 THFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 122 ~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
+.|+|.+..+.+|.|+.||+|.|.+.
T Consensus 9 Alydy~a~~~~ELsf~~Gd~i~vl~~ 34 (67)
T 2b86_A 9 AKWDYTAQQDQELDIKKNERLWLLDD 34 (67)
T ss_dssp ESSCBCCSSTTSCCBCTTCEEEEEEC
T ss_pred EeeeECCCCCCccccCCCCEEEEEec
Confidence 56889999999999999999887443
No 478
>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens}
Probab=62.96 E-value=5 Score=28.98 Aligned_cols=26 Identities=19% Similarity=0.565 Sum_probs=22.1
Q ss_pred ccccCCCCCCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|.+..+.+|.|+.||+|.|..
T Consensus 11 ~alydy~~~~~~eLs~~~Gd~i~v~~ 36 (72)
T 2jw4_A 11 VAKFDYVAQQEQELDIKKNERLWLLD 36 (72)
T ss_dssp ECSSCCCCSSTTSCCCCTTCEEEEEE
T ss_pred EECcCCCcCCCCcccCCCCCEEEEEE
Confidence 35689999999999999999988744
No 479
>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic}
Probab=62.96 E-value=6.7 Score=28.31 Aligned_cols=26 Identities=19% Similarity=0.420 Sum_probs=21.3
Q ss_pred cccccCCCCCCCCccccccCCEEEEce
Q psy9829 120 HLTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 120 ~a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
+++.|+|.. .+.+|.|+.||+|.|..
T Consensus 3 a~alydy~~-~~~eLs~~~Gd~i~v~~ 28 (73)
T 2kxd_A 3 APPLPPYSA-GGREVTMKKGDILTLLN 28 (73)
T ss_dssp CCCCCSSCC-CSCCCCBCTTCEEEEEE
T ss_pred EEEeeeeCC-CCCEeeEcCCCEEEEEE
Confidence 456789997 88899999999988733
No 480
>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.87 E-value=3.8 Score=29.26 Aligned_cols=26 Identities=15% Similarity=0.478 Sum_probs=21.9
Q ss_pred ccccCCCCCCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|.+..+.+|.|+.||+|.|..
T Consensus 11 ~al~dy~~~~~~eLs~~~Gd~i~v~~ 36 (71)
T 2cre_A 11 RALYDNCPDCSDELAFSRGDILTILE 36 (71)
T ss_dssp EESSCCCCSSSSBCCCCSSCCEEEEE
T ss_pred EECcccCcCCCCCCCCCCCCEEEEeE
Confidence 35688999999999999999988733
No 481
>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=62.74 E-value=4.7 Score=29.80 Aligned_cols=28 Identities=21% Similarity=0.414 Sum_probs=23.3
Q ss_pred cccccCCCCCCCCccccccCCEEEEcee
Q psy9829 120 HLTHFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 120 ~a~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
+.+.|+|++..+.+|.|+.||+|.|...
T Consensus 20 ~~al~dy~~~~~~eLs~~~Gd~i~v~~~ 47 (81)
T 1x43_A 20 ARVLYDYDAANSTELSLLADEVITVFSV 47 (81)
T ss_dssp EEESSCCCCSSTTBCCCCTTCEEEEECC
T ss_pred EEEcccCCCCCCCcCCCCCCCEEEEEEc
Confidence 3467899999999999999999988433
No 482
>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=62.73 E-value=4.9 Score=29.37 Aligned_cols=25 Identities=32% Similarity=0.727 Sum_probs=21.1
Q ss_pred cccccCCCCCC-------CCccccccCCEEEE
Q psy9829 120 HLTHFNYDQPE-------KGEMSFRKGDVFHV 144 (333)
Q Consensus 120 ~a~~~~~~gpa-------~g~l~lr~gD~I~V 144 (333)
+.+.|+|+... +.+|.|+.||+|.|
T Consensus 10 ~~Al~dy~~~~~~~~~~~~~eLsf~~Gd~i~v 41 (76)
T 2csi_A 10 MVALYDYDPRESSPNVDVEAELTFCTGDIITV 41 (76)
T ss_dssp EECSSCCCTTTTSCSSSTTTSCCCCTTCEEEE
T ss_pred EEEcccCCCCCcccCCCCCCcccCCCCCEEEE
Confidence 34578888887 88999999999888
No 483
>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=62.69 E-value=4.3 Score=28.84 Aligned_cols=27 Identities=22% Similarity=0.523 Sum_probs=22.5
Q ss_pred ccccCCCCCCCCccccccCCEEEEcee
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
.+.|+|....+.+|.|++||+|.|...
T Consensus 11 ~al~dy~~~~~~eLs~~~Gd~i~v~~~ 37 (68)
T 1wi7_A 11 QVAFSYLPQNDDELELKVGDIIEVVGE 37 (68)
T ss_dssp EESSCBCCSSTTBCCBCTTCEECCCEE
T ss_pred EECccCCcCCCCCccCcCCCEEEEEEc
Confidence 457899999999999999999877433
No 484
>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.68 E-value=5.8 Score=29.27 Aligned_cols=26 Identities=27% Similarity=0.487 Sum_probs=22.0
Q ss_pred ccccCCCCCCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|....+.+|.|+.||+|.|..
T Consensus 14 ~al~dy~~~~~~eLs~~~Gd~i~v~~ 39 (81)
T 2ysq_A 14 EAVWDHVTMANRELAFKAGDVIKVLD 39 (81)
T ss_dssp EESSCCCCSSSSSCCCCTTCEEEEEE
T ss_pred EEeeeECCCCCCcCCCCCCCEEEEEE
Confidence 45688999999999999999987743
No 485
>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=62.67 E-value=4.4 Score=29.51 Aligned_cols=26 Identities=35% Similarity=0.589 Sum_probs=22.1
Q ss_pred ccccCCCCCCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|....+.+|.|+.||+|.|..
T Consensus 14 ~al~dy~~~~~~eLs~~~Gd~i~v~~ 39 (76)
T 1ujy_A 14 KARFNFKQTNEDELSVCKGDIIYVTR 39 (76)
T ss_dssp ECCSCBCCSSTTSCCBCSSCCEEESS
T ss_pred EECccCCcCCCCcccCCCCCEEEEEE
Confidence 35688999999999999999998843
No 486
>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A
Probab=62.66 E-value=5 Score=27.74 Aligned_cols=25 Identities=24% Similarity=0.578 Sum_probs=21.5
Q ss_pred cccCCCCCCCCccccccCCEEEEce
Q psy9829 122 THFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 122 ~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
+.|+|.+..+.+|.|+.||+|.|..
T Consensus 6 al~dy~~~~~~eLs~~~Gd~i~v~~ 30 (60)
T 1i07_A 6 SKYDFVARNSSELSVMKDDVLEILD 30 (60)
T ss_dssp ESSCBCCSSTTBCCBCTTCEEEECG
T ss_pred ECccCCCCCCCcccCCCCCEEEEEE
Confidence 5688999999999999999998833
No 487
>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A
Probab=62.65 E-value=4.6 Score=29.17 Aligned_cols=26 Identities=19% Similarity=0.716 Sum_probs=22.2
Q ss_pred ccccCCCCCCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|.+..+.+|.|+.||+|.|..
T Consensus 11 ~al~dy~~~~~~eLs~~~Gd~i~v~~ 36 (73)
T 2dbm_A 11 RALYDFEPENEGELGFKEGDIITLTN 36 (73)
T ss_dssp EESSCBCCCSTTCCCBCTTCEEECCB
T ss_pred EEccccCCCCCCCccCCCCCEEEEEE
Confidence 45688999999999999999998843
No 488
>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A
Probab=62.59 E-value=6.5 Score=27.19 Aligned_cols=25 Identities=28% Similarity=0.543 Sum_probs=21.5
Q ss_pred cccccCCCCCCCCccccccCCEEEE
Q psy9829 120 HLTHFNYDQPEKGEMSFRKGDVFHV 144 (333)
Q Consensus 120 ~a~~~~~~gpa~g~l~lr~gD~I~V 144 (333)
+.+.|+|.+..+.+|.|++||+|.|
T Consensus 9 ~~al~dy~~~~~~eLs~~~Gd~i~v 33 (64)
T 4f14_A 9 YRAMYDYSAQDEDEVSFRDGDYIVN 33 (64)
T ss_dssp EEESSCBCCCSTTBCCBCTTCEEEE
T ss_pred EEECeeeCCcCCCcCCCCCCCEEEE
Confidence 3457889999999999999999877
No 489
>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}
Probab=62.51 E-value=5.5 Score=28.34 Aligned_cols=28 Identities=11% Similarity=0.134 Sum_probs=21.3
Q ss_pred cccccCCCCC--CCCccccccCCEEEEcee
Q psy9829 120 HLTHFNYDQP--EKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 120 ~a~~~~~~gp--a~g~l~lr~gD~I~Vnd~ 147 (333)
+.+.|+|... ...+|.|++||+|.|...
T Consensus 9 ~~alydy~~~~~~~~eLs~~~Gd~i~v~~~ 38 (67)
T 2eyx_A 9 ARVIQKRVPNAYDKTALALEVGELVKVTKI 38 (67)
T ss_dssp EEECCCBCCCTTCSSBCCBCSSEEEEEEEE
T ss_pred EEEeEEECCCCCCCCccccCCCCEEEEEEe
Confidence 3456788877 667899999999887443
No 490
>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.35 E-value=5.2 Score=30.21 Aligned_cols=28 Identities=29% Similarity=0.460 Sum_probs=23.1
Q ss_pred ccccCCCCCCCCccccccCCEEEEceee
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVIDTL 148 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd~d 148 (333)
.+.|+|....+.+|.|+.||+|.|...+
T Consensus 21 ~al~dy~~~~~~eLs~~~Gd~i~v~~~~ 48 (88)
T 2cub_A 21 YVKFNYMAEREDELSLIKGTKVIVMEKC 48 (88)
T ss_dssp EESSCCCCCSTTBCCCCTTEEEEEEEEC
T ss_pred EEccccCCCCCCCcCCCCCCEEEEEEcc
Confidence 3568899999999999999999884443
No 491
>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=62.27 E-value=4.3 Score=29.04 Aligned_cols=27 Identities=22% Similarity=0.599 Sum_probs=22.5
Q ss_pred ccccCCCCCCCCccccccCCEEEEcee
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
.+.|+|....+.+|.|+.||+|.|...
T Consensus 11 ~al~dy~~~~~~eLs~~~Gd~i~v~~~ 37 (70)
T 2da9_A 11 KVIFPYEAQNDDELTIKEGDIVTLINK 37 (70)
T ss_dssp EECSCCCCSSTTBCCCCTTEEEEEEEC
T ss_pred EECcCCCCCCcCEeeEcCCCEEEEEEC
Confidence 456889999999999999999887443
No 492
>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus}
Probab=62.16 E-value=6.5 Score=28.17 Aligned_cols=25 Identities=16% Similarity=0.234 Sum_probs=21.4
Q ss_pred ccccCCCCCCCCccccccCCEEEEc
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVI 145 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vn 145 (333)
.+.|+|....+.+|.|++||+|.|-
T Consensus 10 ~al~~y~~~~~~eLs~~~Gd~i~v~ 34 (71)
T 2fpf_A 10 RAIFRFVPRHEDELELEVDDPLLVE 34 (71)
T ss_dssp EECSCBCCSSTTBCCBCTTCEEEEE
T ss_pred EECeeECccCCCcccCcCCcEEEEe
Confidence 4568899899999999999998873
No 493
>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.02 E-value=5.4 Score=30.14 Aligned_cols=26 Identities=27% Similarity=0.561 Sum_probs=22.6
Q ss_pred cccccCCCCCCCCccccccCCEEEEc
Q psy9829 120 HLTHFNYDQPEKGEMSFRKGDVFHVI 145 (333)
Q Consensus 120 ~a~~~~~~gpa~g~l~lr~gD~I~Vn 145 (333)
+.+.|+|.+..+.+|.|+.||+|.|.
T Consensus 20 ~~alydy~~~~~~eLsf~~Gd~i~v~ 45 (90)
T 2yup_A 20 AVAQYTFKGDLEVELSFRKGEHICLI 45 (90)
T ss_dssp EEECSCCCCCSSSBCCCCTTCEEEES
T ss_pred EEEeecCCcCCcCcCCCCCCCEEEEE
Confidence 44678999999999999999999883
No 494
>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}
Probab=61.91 E-value=5.1 Score=28.58 Aligned_cols=25 Identities=12% Similarity=0.529 Sum_probs=21.4
Q ss_pred ccccCCCCCCCCccccccCCEEEEc
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVI 145 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vn 145 (333)
.+.|+|.+....+|.|+.||+|.|.
T Consensus 10 ~al~dy~~~~~~eLs~~~Gd~i~v~ 34 (71)
T 2jt4_A 10 IVQYDFMAESQDELTIKSGDKVYIL 34 (71)
T ss_dssp EECSCBCCSSTTBCCBCTTCEEEEE
T ss_pred EEcccCCCCCCCcccCCCCCEEEEE
Confidence 3568899999999999999998873
No 495
>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=61.85 E-value=5.5 Score=28.35 Aligned_cols=27 Identities=19% Similarity=0.431 Sum_probs=22.6
Q ss_pred ccccCCCCCCCCccccccCCEEEEcee
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
.+.|+|.+..+.+|.|+.||+|.|.+.
T Consensus 11 ~alydy~~~~~~eLs~~~Gd~i~v~~~ 37 (68)
T 1wxb_A 11 KILYDFTARNANELSVLKDEVLEVLED 37 (68)
T ss_dssp ECSSCBCCSSSSBCCBCTTCEEEEEEC
T ss_pred EECccCCCCCCCccCCCCCCEEEEEEc
Confidence 356899999999999999999887443
No 496
>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens}
Probab=61.82 E-value=5.2 Score=28.51 Aligned_cols=27 Identities=15% Similarity=0.453 Sum_probs=22.7
Q ss_pred ccccCCCCCCCCccccccCCEEEEcee
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
.+.|+|.+..+.+|.|+.||+|.|...
T Consensus 11 ~alydy~~~~~~eLs~~~Gd~i~v~~~ 37 (68)
T 1wxt_A 11 QVLYEFEARNPRELTVVQGEKLEVLDH 37 (68)
T ss_dssp EESSCBCCCSSSBCCBCTTCEEEEEEC
T ss_pred EECceECCCCcCcCCCCCCCEEEEEEc
Confidence 456899999999999999999887444
No 497
>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=61.71 E-value=5.1 Score=28.59 Aligned_cols=26 Identities=12% Similarity=0.510 Sum_probs=22.3
Q ss_pred cccccCCCCCCCCccccccCCEEEEc
Q psy9829 120 HLTHFNYDQPEKGEMSFRKGDVFHVI 145 (333)
Q Consensus 120 ~a~~~~~~gpa~g~l~lr~gD~I~Vn 145 (333)
+.+.|+|.+..+.+|.|+.||+|.|.
T Consensus 10 ~~alydy~~~~~~eLs~~~Gd~i~vl 35 (70)
T 2ct4_A 10 CVAIYHFEGSSEGTISMAEGEDLSLM 35 (70)
T ss_dssp EEESSCBCCCSTTCCCBCTTCEEEEE
T ss_pred EEEcccCCCCCCCcCCCCCCCEEEEE
Confidence 34678999999999999999998873
No 498
>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.69 E-value=5.1 Score=29.95 Aligned_cols=26 Identities=19% Similarity=0.413 Sum_probs=22.3
Q ss_pred ccccCCCCCCCCccccccCCEEEEce
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVID 146 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd 146 (333)
.+.|+|.+..+.+|.|+.||+|.|..
T Consensus 12 ~al~dy~~~~~~eLsf~~Gd~i~v~~ 37 (85)
T 2dlp_A 12 IALRSYITDNCSLLSFHRGDLIKLLP 37 (85)
T ss_dssp EESSCBCCSSSSBCCBCTTCEEEECC
T ss_pred EECCCCCccCcCCccCcCCCEEEEEE
Confidence 45789999999999999999998843
No 499
>2pqh_A Spectrin alpha chain, brain; SH3 domain, chimera, , structural protein; 1.75A {Gallus gallus}
Probab=61.63 E-value=6 Score=29.18 Aligned_cols=26 Identities=19% Similarity=0.680 Sum_probs=21.8
Q ss_pred cccCCCCCCCCccccccCCEEEEcee
Q psy9829 122 THFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 122 ~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
+.|+|.+..+.+|.|+.||+|.|...
T Consensus 7 al~dy~~~~~~eLs~~~Gd~i~v~~~ 32 (80)
T 2pqh_A 7 ALYDYQEKSPREVTMKKGDILTLLNS 32 (80)
T ss_dssp ECSCBCCCSTTBCCBCTTCEEEEEEC
T ss_pred ECccCCCCCCCccCCCCCCEEEEEEe
Confidence 56889999999999999999877443
No 500
>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1
Probab=61.60 E-value=5.9 Score=29.86 Aligned_cols=27 Identities=22% Similarity=0.704 Sum_probs=22.5
Q ss_pred ccccCCCCCCCCccccccCCEEEEcee
Q psy9829 121 LTHFNYDQPEKGEMSFRKGDVFHVIDT 147 (333)
Q Consensus 121 a~~~~~~gpa~g~l~lr~gD~I~Vnd~ 147 (333)
.+.|+|.+..+.+|.|+.||+|.|...
T Consensus 21 ~Alydy~a~~~~eLsf~~Gd~i~Vl~~ 47 (83)
T 1neg_A 21 LALYDYQEKSPREVTMKKGDILTLLNS 47 (83)
T ss_dssp EESSCBCCSSTTBCCBCTTCEEEEEEC
T ss_pred EEccccCCCCCCccccCCCCEEEEEEe
Confidence 456899999999999999999887443
Done!