Query psy9839
Match_columns 197
No_of_seqs 189 out of 681
Neff 4.8
Searched_HMMs 46136
Date Fri Aug 16 20:59:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9839.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/9839hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0169|consensus 100.0 1.1E-54 2.3E-59 418.5 9.1 161 24-188 216-383 (746)
2 PLN02228 Phosphoinositide phos 100.0 1.9E-52 4E-57 397.5 10.4 158 27-188 37-201 (567)
3 PLN02222 phosphoinositide phos 100.0 1E-50 2.2E-55 386.4 10.1 155 26-188 37-198 (581)
4 PLN02230 phosphoinositide phos 100.0 1.6E-50 3.4E-55 386.0 10.4 159 24-188 40-209 (598)
5 KOG1264|consensus 100.0 5E-50 1.1E-54 388.1 8.3 164 21-188 231-403 (1267)
6 PLN02952 phosphoinositide phos 100.0 2.1E-49 4.5E-54 378.5 10.0 157 26-188 51-218 (599)
7 PLN02223 phosphoinositide phos 100.0 2.7E-49 5.8E-54 373.2 9.8 159 24-188 27-202 (537)
8 KOG1265|consensus 100.0 4E-48 8.8E-53 376.8 8.8 160 25-186 234-408 (1189)
9 cd08594 PI-PLCc_eta Catalytic 100.0 7.5E-46 1.6E-50 319.0 4.3 92 94-188 1-96 (227)
10 cd08633 PI-PLCc_eta2 Catalytic 100.0 1.5E-45 3.3E-50 321.3 4.3 92 94-188 1-96 (254)
11 cd08632 PI-PLCc_eta1 Catalytic 100.0 2.3E-45 4.9E-50 320.0 4.0 92 94-188 1-96 (253)
12 cd08596 PI-PLCc_epsilon Cataly 100.0 3.9E-45 8.6E-50 318.9 4.2 92 94-188 1-96 (254)
13 cd08629 PI-PLCc_delta1 Catalyt 100.0 5.4E-45 1.2E-49 318.6 4.2 92 94-188 1-96 (258)
14 cd08595 PI-PLCc_zeta Catalytic 100.0 5.5E-45 1.2E-49 318.4 4.0 92 94-188 1-96 (257)
15 cd08631 PI-PLCc_delta4 Catalyt 100.0 5.8E-45 1.3E-49 318.4 4.1 92 94-188 1-96 (258)
16 cd08626 PI-PLCc_beta4 Catalyti 100.0 5.8E-45 1.3E-49 318.3 3.8 92 94-188 1-98 (257)
17 cd08624 PI-PLCc_beta2 Catalyti 100.0 9.2E-45 2E-49 317.6 4.6 92 94-188 1-98 (261)
18 cd08623 PI-PLCc_beta1 Catalyti 100.0 1.3E-44 2.7E-49 316.3 4.5 92 94-188 1-98 (258)
19 cd08630 PI-PLCc_delta3 Catalyt 100.0 1.4E-44 3E-49 316.1 3.9 92 94-188 1-96 (258)
20 cd08591 PI-PLCc_beta Catalytic 100.0 2.3E-44 4.9E-49 314.6 3.9 92 94-188 1-98 (257)
21 cd08625 PI-PLCc_beta3 Catalyti 100.0 2.7E-44 5.8E-49 314.4 4.4 92 94-188 1-98 (258)
22 cd08593 PI-PLCc_delta Catalyti 100.0 3.1E-44 6.6E-49 313.9 4.1 92 94-188 1-96 (257)
23 cd08558 PI-PLCc_eukaryota Cata 100.0 7.1E-44 1.5E-48 306.7 3.9 92 94-188 1-96 (226)
24 cd08598 PI-PLC1c_yeast Catalyt 100.0 8.5E-44 1.8E-48 307.1 3.8 92 94-188 1-96 (231)
25 cd08628 PI-PLCc_gamma2 Catalyt 100.0 1.2E-43 2.6E-48 309.6 3.6 92 94-188 1-96 (254)
26 cd08627 PI-PLCc_gamma1 Catalyt 100.0 1.8E-43 3.8E-48 304.5 4.1 92 94-188 1-96 (229)
27 cd08599 PI-PLCc_plant Catalyti 100.0 2E-42 4.3E-47 298.1 4.1 92 94-188 1-96 (228)
28 cd08592 PI-PLCc_gamma Catalyti 100.0 9.6E-42 2.1E-46 294.0 4.0 92 94-188 1-96 (229)
29 cd08597 PI-PLCc_PRIP_metazoa C 100.0 2E-41 4.3E-46 296.6 3.7 92 94-188 1-96 (260)
30 smart00148 PLCXc Phospholipase 99.9 7.2E-27 1.6E-31 185.9 3.6 91 95-188 1-95 (135)
31 cd00137 PI-PLCc Catalytic doma 99.9 1.6E-25 3.4E-30 196.4 2.1 90 94-187 1-99 (274)
32 PF00388 PI-PLC-X: Phosphatidy 99.8 1.5E-21 3.2E-26 155.1 4.3 81 97-180 1-81 (146)
33 PF09279 EF-hand_like: Phospho 99.4 1.2E-13 2.5E-18 100.2 0.6 64 26-89 13-79 (83)
34 cd08589 PI-PLCc_SaPLC1_like Ca 99.0 6.6E-11 1.4E-15 107.2 2.0 93 95-187 3-134 (324)
35 cd08590 PI-PLCc_Rv2075c_like C 98.8 2.7E-09 5.8E-14 94.0 4.1 83 94-180 3-102 (267)
36 cd08557 PI-PLCc_bacteria_like 98.4 2.1E-07 4.5E-12 79.1 3.3 83 95-180 3-93 (271)
37 cd08555 PI-PLCc_GDPD_SF Cataly 98.2 2.1E-06 4.6E-11 70.2 4.9 66 109-180 3-74 (179)
38 cd08588 PI-PLCc_At5g67130_like 97.1 0.00057 1.2E-08 60.5 4.0 80 96-179 7-89 (270)
39 cd08586 PI-PLCc_BcPLC_like Cat 96.4 0.0027 5.9E-08 56.3 3.6 80 96-179 5-86 (279)
40 PF03009 GDPD: Glycerophosphor 95.9 0.0096 2.1E-07 48.7 3.9 40 120-162 8-47 (256)
41 cd08556 GDPD Glycerophosphodie 95.8 0.013 2.9E-07 46.5 4.3 51 119-177 10-60 (189)
42 cd08579 GDPD_memb_like Glycero 93.7 0.063 1.4E-06 44.9 3.2 40 120-162 11-50 (220)
43 cd08563 GDPD_TtGDE_like Glycer 93.7 0.064 1.4E-06 45.1 3.3 40 120-162 13-52 (230)
44 PRK11143 glpQ glycerophosphodi 93.1 0.13 2.8E-06 47.3 4.4 51 109-162 24-78 (355)
45 cd08567 GDPD_SpGDE_like Glycer 92.9 0.1 2.3E-06 44.2 3.4 40 121-163 14-53 (263)
46 cd08582 GDPD_like_2 Glyceropho 92.8 0.1 2.2E-06 43.9 3.1 40 120-162 11-50 (233)
47 cd08562 GDPD_EcUgpQ_like Glyce 92.7 0.11 2.4E-06 43.2 3.3 40 120-162 11-50 (229)
48 cd08561 GDPD_cytoplasmic_ScUgp 92.6 0.12 2.6E-06 44.0 3.3 40 120-162 11-50 (249)
49 cd08575 GDPD_GDE4_like Glycero 92.5 0.14 3.1E-06 44.4 3.7 39 121-162 14-52 (264)
50 cd08574 GDPD_GDE_2_3_6 Glycero 92.1 0.15 3.2E-06 44.1 3.3 39 121-162 15-53 (252)
51 cd08600 GDPD_EcGlpQ_like Glyce 92.0 0.15 3.3E-06 45.8 3.4 41 119-162 12-52 (318)
52 cd08607 GDPD_GDE5 Glycerophosp 91.9 0.18 3.8E-06 44.0 3.6 48 113-163 12-59 (290)
53 cd08601 GDPD_SaGlpQ_like Glyce 91.7 0.18 3.8E-06 43.2 3.3 39 121-162 14-52 (256)
54 cd08581 GDPD_like_1 Glyceropho 91.0 0.22 4.8E-06 42.4 3.2 39 121-162 12-50 (229)
55 cd08571 GDPD_SHV3_plant Glycer 91.0 0.2 4.4E-06 44.7 3.1 39 121-162 14-52 (302)
56 cd08577 PI-PLCc_GDPD_SF_unchar 90.9 0.19 4.1E-06 43.5 2.7 61 108-187 4-64 (228)
57 cd08565 GDPD_pAtGDE_like Glyce 90.8 0.22 4.9E-06 42.5 3.1 39 121-162 12-50 (235)
58 cd08564 GDPD_GsGDE_like Glycer 90.8 0.24 5.2E-06 42.8 3.3 39 120-161 18-56 (265)
59 cd08566 GDPD_AtGDE_like Glycer 90.7 0.26 5.5E-06 42.2 3.4 39 121-162 14-52 (240)
60 cd08568 GDPD_TmGDE_like Glycer 90.7 0.3 6.6E-06 41.0 3.7 40 120-162 12-51 (226)
61 cd08612 GDPD_GDE4 Glycerophosp 90.6 0.26 5.7E-06 43.6 3.4 39 121-162 40-78 (300)
62 cd08559 GDPD_periplasmic_GlpQ_ 90.5 0.25 5.5E-06 43.7 3.3 40 120-162 13-52 (296)
63 cd08573 GDPD_GDE1 Glycerophosp 90.3 0.29 6.2E-06 42.5 3.3 40 120-162 11-50 (258)
64 cd08570 GDPD_YPL206cp_fungi Gl 90.0 0.37 8E-06 40.7 3.7 40 120-162 11-50 (234)
65 cd08580 GDPD_Rv2277c_like Glyc 89.9 0.35 7.6E-06 42.6 3.6 40 120-162 13-52 (263)
66 cd08608 GDPD_GDE2 Glycerophosp 89.9 0.19 4E-06 46.4 1.9 41 121-164 15-55 (351)
67 cd08606 GDPD_YPL110cp_fungi Gl 89.8 0.29 6.3E-06 42.6 3.1 39 122-163 24-62 (286)
68 PRK09454 ugpQ cytoplasmic glyc 89.7 0.32 6.9E-06 41.8 3.1 40 120-162 20-59 (249)
69 cd08609 GDPD_GDE3 Glycerophosp 89.7 0.33 7.1E-06 44.0 3.3 39 121-162 40-78 (315)
70 cd08605 GDPD_GDE5_like_1_plant 89.7 0.33 7.1E-06 42.3 3.3 38 122-162 25-62 (282)
71 cd08602 GDPD_ScGlpQ1_like Glyc 89.4 0.34 7.3E-06 43.5 3.2 41 119-162 12-52 (309)
72 cd08583 PI-PLCc_GDPD_SF_unchar 89.1 0.51 1.1E-05 40.0 3.9 39 121-162 14-52 (237)
73 cd08604 GDPD_SHV3_repeat_2 Gly 88.2 0.56 1.2E-05 41.9 3.7 41 119-162 12-52 (300)
74 cd08572 GDPD_GDE5_like Glycero 87.9 0.52 1.1E-05 41.8 3.3 42 120-164 20-61 (293)
75 cd08560 GDPD_EcGlpQ_like_1 Gly 86.8 0.61 1.3E-05 43.1 3.2 37 121-160 30-66 (356)
76 cd08584 PI-PLCc_GDPD_SF_unchar 86.0 0.84 1.8E-05 39.0 3.4 49 124-178 8-56 (192)
77 cd08587 PI-PLCXDc_like Catalyt 86.0 1.1 2.3E-05 39.5 4.2 79 98-179 6-105 (288)
78 cd08610 GDPD_GDE6 Glycerophosp 85.9 0.8 1.7E-05 41.6 3.4 40 121-163 36-75 (316)
79 PF13833 EF-hand_8: EF-hand do 85.8 1.4 2.9E-05 28.7 3.7 46 28-78 4-52 (54)
80 cd08578 GDPD_NUC-2_fungi Putat 85.5 0.83 1.8E-05 41.3 3.3 37 123-162 16-52 (300)
81 COG0584 UgpQ Glycerophosphoryl 84.7 0.78 1.7E-05 38.9 2.7 39 121-162 19-57 (257)
82 KOG2258|consensus 83.7 0.93 2E-05 41.5 2.8 40 121-163 82-121 (341)
83 cd08585 GDPD_like_3 Glyceropho 83.4 1.2 2.5E-05 38.3 3.2 38 121-162 20-57 (237)
84 cd08603 GDPD_SHV3_repeat_1 Gly 81.1 1.9 4.1E-05 39.1 3.8 39 121-162 14-54 (299)
85 cd08613 GDPD_GDE4_like_1 Glyce 79.9 1.7 3.6E-05 39.7 3.0 38 122-162 60-97 (309)
86 cd08622 PI-PLCXDc_CG14945_like 76.7 2.9 6.4E-05 37.1 3.6 78 98-178 6-92 (276)
87 cd08620 PI-PLCXDc_like_1 Catal 74.7 3.5 7.6E-05 37.0 3.5 79 98-179 6-90 (281)
88 cd08616 PI-PLCXD1c Catalytic d 74.6 3.2 7E-05 37.0 3.3 76 98-179 7-110 (290)
89 cd05029 S-100A6 S-100A6: S-100 71.9 11 0.00024 27.7 5.1 49 26-78 26-78 (88)
90 cd00051 EFh EF-hand, calcium b 68.5 24 0.00052 21.4 5.9 48 26-77 14-62 (63)
91 cd00052 EH Eps15 homology doma 67.7 31 0.00067 22.4 6.3 48 25-77 12-59 (67)
92 PTZ00184 calmodulin; Provision 65.9 24 0.00052 26.3 6.0 13 67-79 136-148 (149)
93 cd08621 PI-PLCXDc_like_2 Catal 65.0 7.9 0.00017 34.8 3.7 79 98-179 6-100 (300)
94 cd05023 S-100A11 S-100A11: S-1 58.9 33 0.00071 25.3 5.5 48 27-78 26-79 (89)
95 PF13499 EF-hand_7: EF-hand do 54.9 26 0.00057 23.2 4.1 48 26-77 14-66 (66)
96 smart00027 EH Eps15 homology d 54.5 56 0.0012 23.7 6.1 49 25-78 23-71 (96)
97 cd08619 PI-PLCXDc_plant Cataly 49.5 19 0.0004 32.8 3.4 76 94-178 22-103 (285)
98 cd05025 S-100A1 S-100A1: S-100 49.4 46 0.001 24.0 4.9 47 28-78 27-79 (92)
99 PTZ00183 centrin; Provisional 47.3 82 0.0018 23.8 6.3 46 29-78 107-153 (158)
100 cd05027 S-100B S-100B: S-100B 44.2 92 0.002 22.8 5.9 47 28-78 26-78 (88)
101 cd05030 calgranulins Calgranul 43.3 76 0.0017 23.0 5.3 49 27-79 25-79 (88)
102 PTZ00268 glycosylphosphatidyli 42.4 22 0.00047 33.6 2.7 48 129-180 91-138 (380)
103 cd05026 S-100Z S-100Z: S-100Z 41.8 1.1E+02 0.0024 22.3 6.0 47 28-78 28-80 (93)
104 PF01367 5_3_exonuc: 5'-3' exo 40.2 14 0.00029 28.5 0.9 13 7-19 11-23 (101)
105 PRK14607 bifunctional glutamin 37.3 1.1E+02 0.0024 29.7 6.7 131 18-176 165-321 (534)
106 cd05031 S-100A10_like S-100A10 37.1 1.2E+02 0.0025 22.0 5.4 48 27-78 25-78 (94)
107 cd05022 S-100A13 S-100A13: S-1 36.4 73 0.0016 23.6 4.3 48 28-79 25-75 (89)
108 PF14658 EF-hand_9: EF-hand do 34.5 1.5E+02 0.0033 21.3 5.5 51 25-78 11-63 (66)
109 KOG0456|consensus 33.2 24 0.00052 34.2 1.5 59 131-192 291-353 (559)
110 cd00213 S-100 S-100: S-100 dom 32.9 1.7E+02 0.0038 20.5 6.3 49 26-78 24-78 (88)
111 PF14788 EF-hand_10: EF hand; 31.7 1.1E+02 0.0024 21.0 4.2 45 29-77 2-47 (51)
112 PF09499 RE_ApaLI: ApaLI-like 31.3 17 0.00037 31.3 0.1 47 137-187 101-150 (191)
113 PTZ00184 calmodulin; Provision 30.7 2.2E+02 0.0047 21.0 6.2 51 25-79 24-75 (149)
114 KOG2421|consensus 28.7 15 0.00033 34.7 -0.6 62 95-162 309-383 (417)
115 PRK09522 bifunctional glutamin 26.8 1.6E+02 0.0035 28.7 6.0 135 16-176 164-326 (531)
116 PHA02567 rnh RnaseH; Provision 26.7 48 0.001 30.5 2.2 19 7-25 193-211 (304)
117 PHA00439 exonuclease 25.9 31 0.00068 31.3 0.9 13 7-19 181-193 (286)
118 PF07942 N2227: N2227-like pro 24.3 61 0.0013 29.1 2.4 64 98-183 167-238 (270)
119 PRK09071 hypothetical protein; 22.6 1.1E+02 0.0024 28.0 3.7 64 112-175 45-131 (323)
120 PRK09482 flap endonuclease-lik 22.2 39 0.00085 30.0 0.8 13 7-19 175-187 (256)
121 PTZ00183 centrin; Provisional 21.9 3.4E+02 0.0073 20.3 5.9 51 24-78 29-80 (158)
122 PF10223 DUF2181: Uncharacteri 21.6 1.7E+02 0.0037 26.0 4.6 54 124-177 13-69 (244)
123 COG0323 MutL DNA mismatch repa 21.2 44 0.00095 33.3 1.0 51 129-180 33-95 (638)
124 PRK07394 hypothetical protein; 20.7 1.3E+02 0.0027 27.7 3.8 64 113-176 47-139 (342)
125 COG0547 TrpD Anthranilate phos 20.5 1.2E+02 0.0026 28.1 3.6 77 112-192 41-142 (338)
126 COG3246 Uncharacterized conser 20.4 53 0.0012 30.2 1.3 53 110-178 20-74 (298)
127 cd05024 S-100A10 S-100A10: A s 20.1 94 0.002 23.6 2.4 54 18-78 22-75 (91)
128 KOG2643|consensus 20.0 1.8E+02 0.0039 28.5 4.7 50 22-78 296-345 (489)
No 1
>KOG0169|consensus
Probab=100.00 E-value=1.1e-54 Score=418.53 Aligned_cols=161 Identities=32% Similarity=0.393 Sum_probs=153.9
Q ss_pred CCCCCCCHHHHHHHHHHHcCCchH---HHHHHHhhhCCCcccccCCCCCHHHHHHHHcCCCCCCCcccccCCCCCCCCCC
Q psy9839 24 EMCPILYTTGCIELLEYGQLQFRH---GNHRRTQRHEPDSGLRSQHCLSFEGFARYLMDKDNFAFASERMCPDDLDMEMP 100 (197)
Q Consensus 24 e~~~~l~~~~l~~FL~~eQ~e~~~---~~~~iI~kyep~~~~r~~~~ls~~gF~~fL~S~~n~~~~~~~~~~v~qDM~~P 100 (197)
+.+..|+.++|.+||+.+|++... .|++||++||+..+.+....|+++||.+||+|+++++|+|.+ ..|+|||++|
T Consensus 216 ~~~~~ls~~~L~~Fl~~~q~e~~~~~~~ae~ii~~~e~~k~~~~~~~l~ldgF~~yL~S~~~~~fdp~~-~~V~qDM~qP 294 (746)
T KOG0169|consen 216 HGKEYLSTDDLLRFLEEEQGEDGATLDEAEEIIERYEPSKEFRRHGLLSLDGFTRYLFSPDCNPFDPIH-RKVHQDMDQP 294 (746)
T ss_pred CCCCccCHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhhccccceecHHHHHHHhcCccCCCCCccc-chhhhcccCc
Confidence 347899999999999999998764 799999999999998888899999999999999999999999 6899999999
Q ss_pred ccchhcccCCcceeecccccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccccchhhHHHHHHhhhcC
Q psy9839 101 LSHYFIASSHNTYLTGHQLKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMDRIASFHLHYHQREHDT 180 (197)
Q Consensus 101 LshYFIsSSHNTYL~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts~I~~~~v~~~Ik~~Af 180 (197)
||||||+|||||||||+||.|.||+|+||+||++||||||||||||++|. |+|+||||||++|+|.+|+++||+|||
T Consensus 295 LsHYFI~SSHNTYLtg~Ql~g~sSvegyI~ALk~GcR~vElD~Wdg~~~e---pvV~HG~TlTs~I~l~~vl~aIk~~AF 371 (746)
T KOG0169|consen 295 LSHYFISSSHNTYLTGDQLGGPSSVEGYIRALKKGCRCVELDCWDGPNGE---PVVYHGHTLTSKILLRDVLRAIKKYAF 371 (746)
T ss_pred chhheEeccccceecccccCCccccHHHHHHHHhCCeEEEEecccCCCCC---eeEecCcccccceeHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999987 999999999999999999999999999
Q ss_pred ----hhHHHhHH
Q psy9839 181 ----NPVRETMR 188 (197)
Q Consensus 181 ----~~v~~~~~ 188 (197)
+||+||+.
T Consensus 372 ~~S~YPvIlsLE 383 (746)
T KOG0169|consen 372 VTSPYPVILTLE 383 (746)
T ss_pred cCCCCCEEEEec
Confidence 99999874
No 2
>PLN02228 Phosphoinositide phospholipase C
Probab=100.00 E-value=1.9e-52 Score=397.46 Aligned_cols=158 Identities=19% Similarity=0.196 Sum_probs=144.6
Q ss_pred CCCCHHHHHHHHHHHcCCchH---HHHHHHhhhCCCcccccCCCCCHHHHHHHHcCCCCCCCcccccCCCCCCCCCCccc
Q psy9839 27 PILYTTGCIELLEYGQLQFRH---GNHRRTQRHEPDSGLRSQHCLSFEGFARYLMDKDNFAFASERMCPDDLDMEMPLSH 103 (197)
Q Consensus 27 ~~l~~~~l~~FL~~eQ~e~~~---~~~~iI~kyep~~~~r~~~~ls~~gF~~fL~S~~n~~~~~~~~~~v~qDM~~PLsh 103 (197)
..|+.++|.+||+++|++... .|++||++|++.+..+..+.|+++||++||+|.+|.++. .+ ..++|||++||||
T Consensus 37 ~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~gF~~yl~s~~n~~~~-~~-~~v~qdm~~PLs~ 114 (567)
T PLN02228 37 GKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHNVFHHHGLVHLNAFYRYLFSDTNSPLP-MS-GQVHHDMKAPLSH 114 (567)
T ss_pred CccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccchhhcccCccCHHHHHHHhcCcccCCCC-cc-ccccccCCCchhh
Confidence 469999999999999998643 699999999998777777789999999999999988874 44 4689999999999
Q ss_pred hhcccCCcceeecccccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccccchhhHHHHHHhhhcC---
Q psy9839 104 YFIASSHNTYLTGHQLKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMDRIASFHLHYHQREHDT--- 180 (197)
Q Consensus 104 YFIsSSHNTYL~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts~I~~~~v~~~Ik~~Af--- 180 (197)
|||||||||||+|+||.|+||+|+|++||++||||||||||||++|. .|+|+||+|+|++|+|++|+++||+|||
T Consensus 115 YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~--~p~v~Hg~t~ts~i~f~~v~~~I~~~AF~~s 192 (567)
T PLN02228 115 YFVYTGHNSYLTGNQVNSRSSVEPIVQALRKGVKVIELDLWPNPSGN--AAEVRHGRTLTSHEDLQKCLNAIKDNAFQVS 192 (567)
T ss_pred heeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEEeccCCCCC--CCEEEeCCcccCceEHHHHHHHHHHhhccCC
Confidence 99999999999999999999999999999999999999999999874 3799999999999999999999999999
Q ss_pred -hhHHHhHH
Q psy9839 181 -NPVRETMR 188 (197)
Q Consensus 181 -~~v~~~~~ 188 (197)
+||+++++
T Consensus 193 ~yPvIlslE 201 (567)
T PLN02228 193 DYPVVITLE 201 (567)
T ss_pred CCCEEEEee
Confidence 89998764
No 3
>PLN02222 phosphoinositide phospholipase C 2
Probab=100.00 E-value=1e-50 Score=386.43 Aligned_cols=155 Identities=20% Similarity=0.184 Sum_probs=140.2
Q ss_pred CCCCCHHHHHHHHHHHcCCchH---HHHHHHhhhCCCcccccCCCCCHHHHHHHHcCCCCCCCcccccCCCCCCCCCCcc
Q psy9839 26 CPILYTTGCIELLEYGQLQFRH---GNHRRTQRHEPDSGLRSQHCLSFEGFARYLMDKDNFAFASERMCPDDLDMEMPLS 102 (197)
Q Consensus 26 ~~~l~~~~l~~FL~~eQ~e~~~---~~~~iI~kyep~~~~r~~~~ls~~gF~~fL~S~~n~~~~~~~~~~v~qDM~~PLs 102 (197)
...|+.++|.+||+++|++... .|++||++|+.. .....|+++||++||+|++|.++.+ ..++|||++|||
T Consensus 37 ~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~ii~~~~~~---~~~~~~~~~gF~~yL~s~~n~~~~~---~~v~qDm~~Pls 110 (581)
T PLN02222 37 NGVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSL---LHRNGLHLDAFFKYLFGDNNPPLAL---HEVHHDMDAPIS 110 (581)
T ss_pred CCCcCHHHHHHHHHHhcCCccCCHHHHHHHHHhhhhh---hhccCcCHHHHHHHhcCCCCCCCcc---ccccccCCCchh
Confidence 4689999999999999998643 799999999532 2356799999999999999988854 358999999999
Q ss_pred chhcccCCcceeecccccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccccchhhHHHHHHhhhcC--
Q psy9839 103 HYFIASSHNTYLTGHQLKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMDRIASFHLHYHQREHDT-- 180 (197)
Q Consensus 103 hYFIsSSHNTYL~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts~I~~~~v~~~Ik~~Af-- 180 (197)
||||+|||||||+|+||.|.||+|+|++||++||||||||||||++|. -|+|+||+|+|++|+|++|+++||+|||
T Consensus 111 ~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~~~--~~~v~HG~tlt~~i~f~~v~~~I~~~aF~~ 188 (581)
T PLN02222 111 HYFIFTGHNSYLTGNQLSSDCSEVPIIDALKKGVRVIELDIWPNSDKD--DIDVLHGMTLTTPVGLIKCLKAIRAHAFDV 188 (581)
T ss_pred hheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEEeccCCCCC--CCeEeeCCcccCceeHHHHHHHHHHhcccC
Confidence 999999999999999999999999999999999999999999999875 2579999999999999999999999999
Q ss_pred --hhHHHhHH
Q psy9839 181 --NPVRETMR 188 (197)
Q Consensus 181 --~~v~~~~~ 188 (197)
+||+|+++
T Consensus 189 s~yPvIlslE 198 (581)
T PLN02222 189 SDYPVVVTLE 198 (581)
T ss_pred CCCCEEEEee
Confidence 89999864
No 4
>PLN02230 phosphoinositide phospholipase C 4
Probab=100.00 E-value=1.6e-50 Score=386.03 Aligned_cols=159 Identities=17% Similarity=0.099 Sum_probs=138.8
Q ss_pred CCCCCCCHHHHHHHHHHHcCCch----HHHHHHHhhhCCCccc---ccCCCCCHHHHHHHHcCCCCCCCcccccCCCCCC
Q psy9839 24 EMCPILYTTGCIELLEYGQLQFR----HGNHRRTQRHEPDSGL---RSQHCLSFEGFARYLMDKDNFAFASERMCPDDLD 96 (197)
Q Consensus 24 e~~~~l~~~~l~~FL~~eQ~e~~----~~~~~iI~kyep~~~~---r~~~~ls~~gF~~fL~S~~n~~~~~~~~~~v~qD 96 (197)
..+..|++++|.+||+++|++.. ..|++||++|++.... .....|+++||.+||+|.+++ +|.+ ..++||
T Consensus 40 ~~~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~F~~yL~s~~~~--~~~~-~~v~qD 116 (598)
T PLN02230 40 DGDAHMSPEQLQKLMAEEGGGEGETSLEEAERIVDEVLRRKHHIAKFTRRNLTLDDFNYYLFSTDLN--PPIA-DQVHQN 116 (598)
T ss_pred CCCCccCHHHHHHHHHHhCCCcccCCHHHHHHHHHHHHhhccccccccccccCHHHHHHHHcCcccC--Cccc-cccccc
Confidence 34579999999999999997542 3688899887654321 234579999999999998743 3444 468999
Q ss_pred CCCCccchhcccCCcceeecccccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccccchhhHHHHHHh
Q psy9839 97 MEMPLSHYFIASSHNTYLTGHQLKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMDRIASFHLHYHQR 176 (197)
Q Consensus 97 M~~PLshYFIsSSHNTYL~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts~I~~~~v~~~Ik 176 (197)
|++|||||||+|||||||+|+||.|.||+|+|++||++||||||||||||+.|+ |+|+||+|+|++|+|.+|+++||
T Consensus 117 M~~PLshYfI~sSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~e---p~v~HG~t~t~~i~f~~v~~~I~ 193 (598)
T PLN02230 117 MDAPLSHYFIFTGHNSYLTGNQLSSNCSELPIADALRRGVRVVELDLWPRGTDD---VCVKHGRTLTKEVKLGKCLDSIK 193 (598)
T ss_pred CCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEeccCCCCCC---cEEeeCCCCcCCcCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998887 99999999999999999999999
Q ss_pred hhcC----hhHHHhHH
Q psy9839 177 EHDT----NPVRETMR 188 (197)
Q Consensus 177 ~~Af----~~v~~~~~ 188 (197)
+||| +||+|+++
T Consensus 194 ~~aF~~s~yPvIlslE 209 (598)
T PLN02230 194 ANAFAISKYPVIITLE 209 (598)
T ss_pred HhccCCCCCCeEEEec
Confidence 9999 89999874
No 5
>KOG1264|consensus
Probab=100.00 E-value=5e-50 Score=388.14 Aligned_cols=164 Identities=26% Similarity=0.326 Sum_probs=142.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHcCCchH----HHHHHHhhhCCCcc-cccCCCCCHHHHHHHHcCCCCCCCcccccCCCCC
Q psy9839 21 RGQEMCPILYTTGCIELLEYGQLQFRH----GNHRRTQRHEPDSG-LRSQHCLSFEGFARYLMDKDNFAFASERMCPDDL 95 (197)
Q Consensus 21 ~~~e~~~~l~~~~l~~FL~~eQ~e~~~----~~~~iI~kyep~~~-~r~~~~ls~~gF~~fL~S~~n~~~~~~~~~~v~q 95 (197)
++|+.+- ++..+|++||..+|+|.++ .+++++.+|--+.. -...+.|++++|..||+|++|++|++.......+
T Consensus 231 ~~~d~~v-V~~~ef~rFL~~~Q~e~~Asdr~av~~~~r~F~~D~~re~~EPyl~v~EFv~fLFSreNslWd~k~d~V~~d 309 (1267)
T KOG1264|consen 231 DRPDASV-VYLQEFQRFLIHEQQEHWASDRNAVREFMRKFIDDTMRETAEPYLFVDEFVTFLFSRENSLWDSKYDAVDMD 309 (1267)
T ss_pred CCccceE-eeHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHHhhhhhhccCcceeHHHHHHHHhhcccccccccccccchh
Confidence 4555554 4589999999999999886 46667777643321 1356889999999999999999999998443344
Q ss_pred CCCCCccchhcccCCcceeecccccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccccchhhHHHHHH
Q psy9839 96 DMEMPLSHYFIASSHNTYLTGHQLKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMDRIASFHLHYHQ 175 (197)
Q Consensus 96 DM~~PLshYFIsSSHNTYL~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts~I~~~~v~~~I 175 (197)
||+.|||||||+||||||||||||.++||.|+|++||++||||||+||||||+|. |+||||||+|++|+|.||+.+|
T Consensus 310 ~Mn~PLShYWIsSSHNTYLTGDQlrSESSleaYar~LrMGCRCIELDCWdGpd~~---pvIyHG~T~TtKIkf~DVlhtI 386 (1267)
T KOG1264|consen 310 DMNNPLSHYWISSSHNTYLTGDQLRSESSLEAYARCLRMGCRCIELDCWDGPDGK---PVIYHGHTRTTKIKFDDVLHTI 386 (1267)
T ss_pred hhcCcchhheeeccCcceecccccccccCHHHHHHHHHhCCeEEEeecccCCCCC---ceEEeccceeeeeehHHHHHHH
Confidence 5999999999999999999999999999999999999999999999999999997 9999999999999999999999
Q ss_pred hhhcC----hhHHHhHH
Q psy9839 176 REHDT----NPVRETMR 188 (197)
Q Consensus 176 k~~Af----~~v~~~~~ 188 (197)
|+||| +||+....
T Consensus 387 kdhAFvtSeyPVILSIE 403 (1267)
T KOG1264|consen 387 KDHAFVTSEYPVILSIE 403 (1267)
T ss_pred HhhceeccCCcEEEEhh
Confidence 99999 79987654
No 6
>PLN02952 phosphoinositide phospholipase C
Probab=100.00 E-value=2.1e-49 Score=378.54 Aligned_cols=157 Identities=20% Similarity=0.172 Sum_probs=135.3
Q ss_pred CCCCCHHHHHHHHHHHcCCch---HHHHHHHhhh----CCCcccccCCCCCHHHHHHHHcCCCCCCCcccccCCCCCCCC
Q psy9839 26 CPILYTTGCIELLEYGQLQFR---HGNHRRTQRH----EPDSGLRSQHCLSFEGFARYLMDKDNFAFASERMCPDDLDME 98 (197)
Q Consensus 26 ~~~l~~~~l~~FL~~eQ~e~~---~~~~~iI~ky----ep~~~~r~~~~ls~~gF~~fL~S~~n~~~~~~~~~~v~qDM~ 98 (197)
.+.|+.++|.+||.++|++.. ..|++|+++| ++... .....|+++||..||+|++ +++|.+ ..++|||+
T Consensus 51 ~~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~l~~~~F~~~l~s~~--~~~p~~-~~v~qdm~ 126 (599)
T PLN02952 51 GGHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVINRRHHVTR-YTRHGLNLDDFFHFLLYDD--LNGPIT-PQVHHDMT 126 (599)
T ss_pred CCccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHhhcccccc-ccccCcCHHHHHHHHcCcc--cccccc-ccccccCC
Confidence 357999999999999999863 2677886655 33221 2345699999999999876 444554 46899999
Q ss_pred CCccchhcccCCcceeecccccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccccchhhHHHHHHhhh
Q psy9839 99 MPLSHYFIASSHNTYLTGHQLKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMDRIASFHLHYHQREH 178 (197)
Q Consensus 99 ~PLshYFIsSSHNTYL~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts~I~~~~v~~~Ik~~ 178 (197)
+|||||||+|||||||+|+||.|+||+|+|++||++||||||||||||++|. -|+|+||||+|++|+|.+|+++||+|
T Consensus 127 ~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~~~--~p~v~Hg~t~ts~i~f~~v~~~I~~~ 204 (599)
T PLN02952 127 APLSHYFIYTGHNSYLTGNQLSSDCSEVPIVKALQRGVRVIELDLWPGSTKD--EILVLHGRTLTTPVPLIKCLKSIRDY 204 (599)
T ss_pred CchhhheeeccccccccCCccCCcCCHHHHHHHHHcCCcEEEEEeecCCCCC--CCEEEeCCccccCcCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999763 28999999999999999999999999
Q ss_pred cC----hhHHHhHH
Q psy9839 179 DT----NPVRETMR 188 (197)
Q Consensus 179 Af----~~v~~~~~ 188 (197)
|| +||+|+++
T Consensus 205 aF~~s~yPvIlslE 218 (599)
T PLN02952 205 AFSSSPYPVIITLE 218 (599)
T ss_pred hccCCCCCEEEEee
Confidence 99 79998864
No 7
>PLN02223 phosphoinositide phospholipase C
Probab=100.00 E-value=2.7e-49 Score=373.18 Aligned_cols=159 Identities=14% Similarity=0.097 Sum_probs=137.7
Q ss_pred CCCCCCCHHHHHHHH---HHHcCCchH---HHHHHHhhh----CCCcccccCCCCCHHHHHHHHcCCCCCCCcccccCCC
Q psy9839 24 EMCPILYTTGCIELL---EYGQLQFRH---GNHRRTQRH----EPDSGLRSQHCLSFEGFARYLMDKDNFAFASERMCPD 93 (197)
Q Consensus 24 e~~~~l~~~~l~~FL---~~eQ~e~~~---~~~~iI~ky----ep~~~~r~~~~ls~~gF~~fL~S~~n~~~~~~~~~~v 93 (197)
+.-..|++++|.+|| .++|+|... +|+.|++++ ++.+..+..+.|+++||.+||+|++++. |.+ ..+
T Consensus 27 ~~~~~m~~~~l~~fl~~l~~~q~e~~~~~~~a~~i~~~~~~~~~~~~~~~~~~~l~~~~f~~~L~s~~~n~--~~~-~~v 103 (537)
T PLN02223 27 HGYDDDMPELLPRFIELLDTEKDEDGAGLNAAEKIAAELKRRKCDILAFRNLRCLELDHLNEFLFSTELNP--PIG-DQV 103 (537)
T ss_pred cCCCCCCHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHhhcccchhhhhccccCHHHHHHHhcCcccCC--ccc-ccc
Confidence 556789999999999 999998643 666666654 4555566678899999999999998554 322 235
Q ss_pred -CCCCCCCccchhcccCCcceeecccccCC-CcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccccchhhHH
Q psy9839 94 -DLDMEMPLSHYFIASSHNTYLTGHQLKGE-SSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMDRIASFHL 171 (197)
Q Consensus 94 -~qDM~~PLshYFIsSSHNTYL~G~Ql~g~-SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts~I~~~~v 171 (197)
+|||++|||||||+|||||||+|+||.|. ||+|+|++||++||||||||||||..+. |+|+||+|+|++|+|.+|
T Consensus 104 ~~~DM~~PLshYfI~SSHNTYL~g~Ql~~~~ss~e~y~~aL~~GcRcvElD~W~~~~~~---~~v~hG~tlts~i~f~~v 180 (537)
T PLN02223 104 RHHDMHAPLSHYFIHTSLKSYFTGNNVFGKLYSIEPIIDALEQGVRVVELDLLPDGKDG---ICVRPKWNFEKPLELQEC 180 (537)
T ss_pred CcccCCCchhhheeeccccccccCCcccCCcccHHHHHHHHHcCCcEEEEEecCCCCCC---CeEeeCCceecceEHHHH
Confidence 99999999999999999999999999999 9999999999999999999999876555 899999999999999999
Q ss_pred HHHHhhhcC-----hhHHHhHH
Q psy9839 172 HYHQREHDT-----NPVRETMR 188 (197)
Q Consensus 172 ~~~Ik~~Af-----~~v~~~~~ 188 (197)
+++||+||| +||+|+++
T Consensus 181 l~aI~~~AF~~s~~yPvIlslE 202 (537)
T PLN02223 181 LDAIKEHAFTKCRSYPLIITFK 202 (537)
T ss_pred HHHHHHHhhhcCCCCceEEEEc
Confidence 999999999 78998864
No 8
>KOG1265|consensus
Probab=100.00 E-value=4e-48 Score=376.76 Aligned_cols=160 Identities=31% Similarity=0.340 Sum_probs=148.7
Q ss_pred CCCCCCHHHHHHHHHHHcCCchH-----------HHHHHHhhhCCCcccccCCCCCHHHHHHHHcCCCCCCCcccccCCC
Q psy9839 25 MCPILYTTGCIELLEYGQLQFRH-----------GNHRRTQRHEPDSGLRSQHCLSFEGFARYLMDKDNFAFASERMCPD 93 (197)
Q Consensus 25 ~~~~l~~~~l~~FL~~eQ~e~~~-----------~~~~iI~kyep~~~~r~~~~ls~~gF~~fL~S~~n~~~~~~~~~~v 93 (197)
-+++|+.++|.+||+++|++++. .+..||++|||+.....++.|+.+||.+||++++|.+..+.. ...
T Consensus 234 ~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~liekyEp~~~~a~~gqms~dgf~ryl~gdEn~i~a~~~-l~l 312 (1189)
T KOG1265|consen 234 KKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLIEKYEPNSDNAEKGQMSTDGFVRYLMGDENAIVALDK-LDL 312 (1189)
T ss_pred CCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHHHHcCCchhhhhccccchhhhHHHhhCCccccccHHH-HHh
Confidence 46899999999999999999874 689999999999988889999999999999999999988776 578
Q ss_pred CCCCCCCccchhcccCCcceeecccccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccccchhhHHHH
Q psy9839 94 DLDMEMPLSHYFIASSHNTYLTGHQLKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMDRIASFHLHY 173 (197)
Q Consensus 94 ~qDM~~PLshYFIsSSHNTYL~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts~I~~~~v~~ 173 (197)
++||++||+||||||||||||||+||.|.||+|||++||+.||||||+|||+|.+-. .-|+|.||+|+|+.|.|+||+.
T Consensus 313 ~~dM~qPl~hYFINSSHNTYlTg~Ql~g~sSvEmYRQvLLsGcRCVELDcWdgk~~d-~EPvITHG~tm~teI~fKdVle 391 (1189)
T KOG1265|consen 313 VTDMDQPLSHYFINSSHNTYLTGGQLGGKSSVEMYRQVLLSGCRCVELDCWDGKGED-EEPVITHGFTMTTEIFFKDVLE 391 (1189)
T ss_pred hhhhccchhhhhccccccceeecccccCcchHHHHHHHHHhcCceEEeeeecCCCCC-CCceeecccchhhhhhHHHHHH
Confidence 999999999999999999999999999999999999999999999999999987432 3499999999999999999999
Q ss_pred HHhhhcC----hhHHHh
Q psy9839 174 HQREHDT----NPVRET 186 (197)
Q Consensus 174 ~Ik~~Af----~~v~~~ 186 (197)
+|+|-|| +||+..
T Consensus 392 AIaEtAFkTSpyPVILS 408 (1189)
T KOG1265|consen 392 AIAETAFKTSPYPVILS 408 (1189)
T ss_pred HHHHhhccCCCCceEEe
Confidence 9999999 788764
No 9
>cd08594 PI-PLCc_eta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif,
Probab=100.00 E-value=7.5e-46 Score=318.98 Aligned_cols=92 Identities=34% Similarity=0.410 Sum_probs=89.2
Q ss_pred CCCCCCCccchhcccCCcceeecccccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccccchhhHHHH
Q psy9839 94 DLDMEMPLSHYFIASSHNTYLTGHQLKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMDRIASFHLHY 173 (197)
Q Consensus 94 ~qDM~~PLshYFIsSSHNTYL~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts~I~~~~v~~ 173 (197)
+|||++||+||||||||||||+|+||.|+||+|+|++||++||||||||||||++|+ |+|+||||+|++|+|++|++
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~Y~~aL~~GcRcvElD~wdg~~~e---PvV~HG~tlts~i~f~dv~~ 77 (227)
T cd08594 1 NQDMTQPLSHYFIASSHNTYLTGDQLLSQSRVDMYARVLQAGCRCVEVDCWDGPDGE---PVVHHGYTLTSKILFRDVIE 77 (227)
T ss_pred CCccCcchhhheeecccCccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCCCC---cEEeeCCCcccCcCHHHHHH
Confidence 699999999999999999999999999999999999999999999999999999998 99999999999999999999
Q ss_pred HHhhhcC----hhHHHhHH
Q psy9839 174 HQREHDT----NPVRETMR 188 (197)
Q Consensus 174 ~Ik~~Af----~~v~~~~~ 188 (197)
+||+||| +||+++++
T Consensus 78 aI~~~AF~~s~yPvIlSlE 96 (227)
T cd08594 78 TINKYAFIKNEYPVILSIE 96 (227)
T ss_pred HHHHhhccCCCCCEEEEec
Confidence 9999999 79988764
No 10
>cd08633 PI-PLCc_eta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m
Probab=100.00 E-value=1.5e-45 Score=321.33 Aligned_cols=92 Identities=32% Similarity=0.386 Sum_probs=89.3
Q ss_pred CCCCCCCccchhcccCCcceeecccccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccccchhhHHHH
Q psy9839 94 DLDMEMPLSHYFIASSHNTYLTGHQLKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMDRIASFHLHY 173 (197)
Q Consensus 94 ~qDM~~PLshYFIsSSHNTYL~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts~I~~~~v~~ 173 (197)
+|||++||+||||+|||||||+|+||.|+||+|+|++||++||||||||||||++|+ |+|+||||+|++|+|++|++
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~Wdg~~~e---P~V~HG~tlts~i~f~~v~~ 77 (254)
T cd08633 1 NQDMTQPLSHYFITSSHNTYLSGDQLMSQSRVDMYAWVLQAGCRCVEVDCWDGPDGE---PIVHHGYTLTSKILFKDVIE 77 (254)
T ss_pred CCCcCcchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEeecCCCCC---cEEeeCCCcccCcCHHHHHH
Confidence 589999999999999999999999999999999999999999999999999999998 99999999999999999999
Q ss_pred HHhhhcC----hhHHHhHH
Q psy9839 174 HQREHDT----NPVRETMR 188 (197)
Q Consensus 174 ~Ik~~Af----~~v~~~~~ 188 (197)
+||+||| +||+|+++
T Consensus 78 ~I~~~AF~~s~yPvIlslE 96 (254)
T cd08633 78 TINKYAFIKNEYPVILSIE 96 (254)
T ss_pred HHHHHhccCCCCCEEEEec
Confidence 9999999 89998764
No 11
>cd08632 PI-PLCc_eta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m
Probab=100.00 E-value=2.3e-45 Score=319.99 Aligned_cols=92 Identities=32% Similarity=0.397 Sum_probs=89.4
Q ss_pred CCCCCCCccchhcccCCcceeecccccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccccchhhHHHH
Q psy9839 94 DLDMEMPLSHYFIASSHNTYLTGHQLKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMDRIASFHLHY 173 (197)
Q Consensus 94 ~qDM~~PLshYFIsSSHNTYL~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts~I~~~~v~~ 173 (197)
+|||++|||||||+|||||||+|+||.|+||+|+|++||++||||||||||||++|+ |+|+||||+|++|+|++|++
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~Wdg~~~e---P~V~HG~Tlts~i~f~dv~~ 77 (253)
T cd08632 1 NQDMDQPLCNYFIASSHNTYLTGDQLLSQSKVDMYARVLQAGCRCVEVDCWDGPDGE---PVVHHGYTLTSKITFRDVIE 77 (253)
T ss_pred CCcccchhhhhhhccCCCccccCCcccCcccHHHHHHHHHcCCcEEEEEeecCCCCC---cEEeeCCCCccCcCHHHHHH
Confidence 699999999999999999999999999999999999999999999999999999998 99999999999999999999
Q ss_pred HHhhhcC----hhHHHhHH
Q psy9839 174 HQREHDT----NPVRETMR 188 (197)
Q Consensus 174 ~Ik~~Af----~~v~~~~~ 188 (197)
+||+||| +||+|+++
T Consensus 78 aI~~~AF~~S~yPvIlSlE 96 (253)
T cd08632 78 TINKYAFVKNEFPVILSIE 96 (253)
T ss_pred HHHHHhccCCCCCEEEEec
Confidence 9999999 79998864
No 12
>cd08596 PI-PLCc_epsilon Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-epsilon isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-epsilon represents a class of mammalian PI-PLC that has an N-terminal CDC25 homology domain with a guanyl-nucleotide exchange factor (GFF) activity, a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core
Probab=100.00 E-value=3.9e-45 Score=318.91 Aligned_cols=92 Identities=39% Similarity=0.510 Sum_probs=89.2
Q ss_pred CCCCCCCccchhcccCCcceeecccccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccccchhhHHHH
Q psy9839 94 DLDMEMPLSHYFIASSHNTYLTGHQLKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMDRIASFHLHY 173 (197)
Q Consensus 94 ~qDM~~PLshYFIsSSHNTYL~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts~I~~~~v~~ 173 (197)
.|||++|||||||+|||||||+|+||.|+||+|+|++||++||||||||||||++|+ |+|+||+|+|++|+|+||++
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdG~~~e---P~V~HG~tlts~i~f~dv~~ 77 (254)
T cd08596 1 EEDLQYPLSYYYIESSHNTYLTGHQLKGESSVELYSQVLLTGCRCVELDCWDGDDGM---PIIYHGHTLTTKIPFKDVVE 77 (254)
T ss_pred CCccccchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEeecCCCCC---cEEeeCCCcccCcCHHHHHH
Confidence 489999999999999999999999999999999999999999999999999999998 99999999999999999999
Q ss_pred HHhhhcC----hhHHHhHH
Q psy9839 174 HQREHDT----NPVRETMR 188 (197)
Q Consensus 174 ~Ik~~Af----~~v~~~~~ 188 (197)
+||+||| +||+|+++
T Consensus 78 ~I~~~AF~~S~yPvIlslE 96 (254)
T cd08596 78 AINRSAFITSDYPVILSIE 96 (254)
T ss_pred HHHHHhccCCCCCEEEEec
Confidence 9999999 79998864
No 13
>cd08629 PI-PLCc_delta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta1 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This subfamily corresponds to the catalytic domain
Probab=100.00 E-value=5.4e-45 Score=318.59 Aligned_cols=92 Identities=30% Similarity=0.355 Sum_probs=89.3
Q ss_pred CCCCCCCccchhcccCCcceeecccccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccccchhhHHHH
Q psy9839 94 DLDMEMPLSHYFIASSHNTYLTGHQLKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMDRIASFHLHY 173 (197)
Q Consensus 94 ~qDM~~PLshYFIsSSHNTYL~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts~I~~~~v~~ 173 (197)
+|||++|||||||+|||||||+|+||.|+||+|+|++||++||||||||||||++|+ |+|+||+|+|++|+|++|++
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~e---P~V~HG~tlts~i~f~~v~~ 77 (258)
T cd08629 1 YQDMDQPLSHYLVSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPNQE---PIIYHGYTFTSKILFCDVLR 77 (258)
T ss_pred CCCCCCchhhheeeccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCCCC---cEEeeCCCCccCcCHHHHHH
Confidence 699999999999999999999999999999999999999999999999999999998 99999999999999999999
Q ss_pred HHhhhcC----hhHHHhHH
Q psy9839 174 HQREHDT----NPVRETMR 188 (197)
Q Consensus 174 ~Ik~~Af----~~v~~~~~ 188 (197)
+||+||| +||+++++
T Consensus 78 ~I~~~AF~~S~yPvIlsLE 96 (258)
T cd08629 78 AIRDYAFKASPYPVILSLE 96 (258)
T ss_pred HHHHHhccCCCCCEEEEee
Confidence 9999999 79998763
No 14
>cd08595 PI-PLCc_zeta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta. This family corresponds to the catalytic domain presenting in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-zeta isozyme. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-zeta represents a class of sperm-specific PI-PLC that has an N-terminal EF-hand domain, a PLC catalytic core domain, and a C-terminal C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y)
Probab=100.00 E-value=5.5e-45 Score=318.43 Aligned_cols=92 Identities=28% Similarity=0.304 Sum_probs=89.3
Q ss_pred CCCCCCCccchhcccCCcceeecccccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccccchhhHHHH
Q psy9839 94 DLDMEMPLSHYFIASSHNTYLTGHQLKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMDRIASFHLHY 173 (197)
Q Consensus 94 ~qDM~~PLshYFIsSSHNTYL~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts~I~~~~v~~ 173 (197)
+|||++|||||||+|||||||+|+||.|+||+|+|++||++||||||||||||++|+ |+|+||+|+|++|+|.+|++
T Consensus 1 ~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~e---p~v~HG~tlt~~i~f~~v~~ 77 (257)
T cd08595 1 YQDMDHPLSDYFISSSHNTYLVSDQLVGPSDLDGYVSALRKGCRCLEIDCWDGADNE---PVVYHGYTLTSKILFKEVIT 77 (257)
T ss_pred CCCCCCchhhheeeccccccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCCCC---cEEecCCCcccccCHHHHHH
Confidence 699999999999999999999999999999999999999999999999999999998 99999999999999999999
Q ss_pred HHhhhcC----hhHHHhHH
Q psy9839 174 HQREHDT----NPVRETMR 188 (197)
Q Consensus 174 ~Ik~~Af----~~v~~~~~ 188 (197)
+||+||| +||+|+++
T Consensus 78 ~I~~~AF~~s~yPvIlslE 96 (257)
T cd08595 78 TVEKYAFEKSDYPVVLSLE 96 (257)
T ss_pred HHHHHhccCCCCCEEEEee
Confidence 9999999 79998763
No 15
>cd08631 PI-PLCc_delta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta4 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which
Probab=100.00 E-value=5.8e-45 Score=318.43 Aligned_cols=92 Identities=33% Similarity=0.398 Sum_probs=89.3
Q ss_pred CCCCCCCccchhcccCCcceeecccccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccccchhhHHHH
Q psy9839 94 DLDMEMPLSHYFIASSHNTYLTGHQLKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMDRIASFHLHY 173 (197)
Q Consensus 94 ~qDM~~PLshYFIsSSHNTYL~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts~I~~~~v~~ 173 (197)
+|||++|||||||+|||||||+|+||.|+||+|+|++||++||||||||||||++|+ |+|+||+|+|++|+|++|++
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~e---P~V~HG~tlts~i~f~~v~~ 77 (258)
T cd08631 1 YQDMTQPLCHYFICSSHNTYLMEDQLRGQSSVEGYIRALKRGCRCVEVDVWDGPNGE---PIVYHGHTFTSKILFKDVVA 77 (258)
T ss_pred CCcCCcchhhheeecCCCccccCCcccCccCHHHHHHHHHcCCcEEEEEeecCCCCC---cEEeeCCcccCCcCHHHHHH
Confidence 699999999999999999999999999999999999999999999999999999998 99999999999999999999
Q ss_pred HHhhhcC----hhHHHhHH
Q psy9839 174 HQREHDT----NPVRETMR 188 (197)
Q Consensus 174 ~Ik~~Af----~~v~~~~~ 188 (197)
+||+||| +||+|+++
T Consensus 78 ~Ik~~AF~~s~yPvIlslE 96 (258)
T cd08631 78 AVAQYAFQVSDYPVILSLE 96 (258)
T ss_pred HHHHHhccCCCCCEEEEee
Confidence 9999999 79998763
No 16
>cd08626 PI-PLCc_beta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 4. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=5.8e-45 Score=318.28 Aligned_cols=92 Identities=33% Similarity=0.367 Sum_probs=88.3
Q ss_pred CCCCCCCccchhcccCCcceeecccccCCCcHHHHHHHHHhcCCCcceeeeeCC--CCCcccceeeecccccccchhhHH
Q psy9839 94 DLDMEMPLSHYFIASSHNTYLTGHQLKGESSVDLYSQFISDYNGEDHYFTRIGP--GGLLNLDKIYKTHAVMDRIASFHL 171 (197)
Q Consensus 94 ~qDM~~PLshYFIsSSHNTYL~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~--~g~ln~p~i~hg~t~ts~I~~~~v 171 (197)
+|||++|||||||+|||||||+|+||.|+||+|+|++||++||||||||||||+ +|+ |+|+||+|+|++|+|+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~~~~e---P~V~HG~tlts~i~f~dv 77 (257)
T cd08626 1 YQDMDQPLAHYFINSSHNTYLTGRQFGGKSSVEMYRQVLLAGCRCIELDCWDGKGEDQE---PIITHGKAMCTDILFKDV 77 (257)
T ss_pred CCcccchhhhheeecCcCccccCCcccCCccHHHHHHHHHcCCcEEEEEecCCCCCCCC---CEEeeCCCCccCcCHHHH
Confidence 699999999999999999999999999999999999999999999999999997 566 999999999999999999
Q ss_pred HHHHhhhcC----hhHHHhHH
Q psy9839 172 HYHQREHDT----NPVRETMR 188 (197)
Q Consensus 172 ~~~Ik~~Af----~~v~~~~~ 188 (197)
+++||+||| +||+|+++
T Consensus 78 ~~aI~~~AF~~s~yPvIlslE 98 (257)
T cd08626 78 IQAIKDTAFVTSDYPVILSFE 98 (257)
T ss_pred HHHHHHHhcccCCCCEEEEEe
Confidence 999999999 79998864
No 17
>cd08624 PI-PLCc_beta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=9.2e-45 Score=317.62 Aligned_cols=92 Identities=30% Similarity=0.294 Sum_probs=88.3
Q ss_pred CCCCCCCccchhcccCCcceeecccccCCCcHHHHHHHHHhcCCCcceeeeeCC--CCCcccceeeecccccccchhhHH
Q psy9839 94 DLDMEMPLSHYFIASSHNTYLTGHQLKGESSVDLYSQFISDYNGEDHYFTRIGP--GGLLNLDKIYKTHAVMDRIASFHL 171 (197)
Q Consensus 94 ~qDM~~PLshYFIsSSHNTYL~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~--~g~ln~p~i~hg~t~ts~I~~~~v 171 (197)
+|||++|||||||+|||||||+|+||.|+||+|+|++||++||||||||||||. +|+ |+|+||+|+|++|+|+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~e---PvV~HG~tlts~i~f~dv 77 (261)
T cd08624 1 HQDMTQPLNHYFINSSHNTYLTAGQFSGLSSPEMYRQVLLSGCRCVELDCWKGKPPDEE---PIITHGFTMTTEILFKDA 77 (261)
T ss_pred CCCCCCchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEecCCCCCCCC---CEEeeCCCcccCcCHHHH
Confidence 699999999999999999999999999999999999999999999999999995 566 999999999999999999
Q ss_pred HHHHhhhcC----hhHHHhHH
Q psy9839 172 HYHQREHDT----NPVRETMR 188 (197)
Q Consensus 172 ~~~Ik~~Af----~~v~~~~~ 188 (197)
+++||+||| +||+|+++
T Consensus 78 ~~~I~~~AF~~s~yPvIlslE 98 (261)
T cd08624 78 IEAIAESAFKTSPYPVILSFE 98 (261)
T ss_pred HHHHHHHhccCCCCCEEEEeh
Confidence 999999999 79998765
No 18
>cd08623 PI-PLCc_beta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=1.3e-44 Score=316.35 Aligned_cols=92 Identities=33% Similarity=0.346 Sum_probs=87.9
Q ss_pred CCCCCCCccchhcccCCcceeecccccCCCcHHHHHHHHHhcCCCcceeeeeCC--CCCcccceeeecccccccchhhHH
Q psy9839 94 DLDMEMPLSHYFIASSHNTYLTGHQLKGESSVDLYSQFISDYNGEDHYFTRIGP--GGLLNLDKIYKTHAVMDRIASFHL 171 (197)
Q Consensus 94 ~qDM~~PLshYFIsSSHNTYL~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~--~g~ln~p~i~hg~t~ts~I~~~~v 171 (197)
.|||++|||||||+|||||||+|+||.|+||+|+|++||++||||||||||||+ +|+ |+|+||+|+|++|+|+||
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~wdG~~~~~e---PiV~HG~tlts~i~f~dv 77 (258)
T cd08623 1 NEDMSQPLSHYFINSSHNTYLTAGQLAGNSSVEMYRQVLLSGCRCVELDCWKGRTAEEE---PVITHGFTMTTEISFKEV 77 (258)
T ss_pred CCCcCCchhhheeecCccccccCCccCCccCHHHHHHHHHcCCCEEEEEeeCCCCCCCC---CEEeeCCCcccCcCHHHH
Confidence 389999999999999999999999999999999999999999999999999998 466 999999999999999999
Q ss_pred HHHHhhhcC----hhHHHhHH
Q psy9839 172 HYHQREHDT----NPVRETMR 188 (197)
Q Consensus 172 ~~~Ik~~Af----~~v~~~~~ 188 (197)
+++||+||| +||+++++
T Consensus 78 ~~~I~~~AF~~S~yPvIlSlE 98 (258)
T cd08623 78 IEAIAECAFKTSPFPILLSFE 98 (258)
T ss_pred HHHHHHHhccCCCCCEEEEeh
Confidence 999999999 79998765
No 19
>cd08630 PI-PLCc_delta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta3 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This family corresponds to the catalytic domain wh
Probab=100.00 E-value=1.4e-44 Score=316.14 Aligned_cols=92 Identities=36% Similarity=0.478 Sum_probs=89.4
Q ss_pred CCCCCCCccchhcccCCcceeecccccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccccchhhHHHH
Q psy9839 94 DLDMEMPLSHYFIASSHNTYLTGHQLKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMDRIASFHLHY 173 (197)
Q Consensus 94 ~qDM~~PLshYFIsSSHNTYL~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts~I~~~~v~~ 173 (197)
+|||++||+||||+|||||||+|+||.|+||+|+|++||++||||||||||||++|+ |+|+||+|+|++|+|++|++
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~~e---P~V~HG~tlts~i~f~~v~~ 77 (258)
T cd08630 1 FQDMSQPLAHYFISSSHNTYLTDSQIGGPSSTEAYVRAFAQGCRCVELDCWEGPGGE---PVIYHGHTLTSKILFRDVIQ 77 (258)
T ss_pred CCccccchhhheeecccCccccCCcccCcccHHHHHHHHHcCCcEEEEEeecCCCCC---cEEeeCCccccceEHHHHHH
Confidence 699999999999999999999999999999999999999999999999999999998 99999999999999999999
Q ss_pred HHhhhcC----hhHHHhHH
Q psy9839 174 HQREHDT----NPVRETMR 188 (197)
Q Consensus 174 ~Ik~~Af----~~v~~~~~ 188 (197)
+||+||| +||+|+++
T Consensus 78 ~I~~~AF~~s~yPvIlslE 96 (258)
T cd08630 78 AVRQHAFTASPYPVILSLE 96 (258)
T ss_pred HHHHHhccCCCCCEEEEee
Confidence 9999999 79998863
No 20
>cd08591 PI-PLCc_beta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homod
Probab=100.00 E-value=2.3e-44 Score=314.57 Aligned_cols=92 Identities=35% Similarity=0.382 Sum_probs=88.6
Q ss_pred CCCCCCCccchhcccCCcceeecccccCCCcHHHHHHHHHhcCCCcceeeeeCCC--CCcccceeeecccccccchhhHH
Q psy9839 94 DLDMEMPLSHYFIASSHNTYLTGHQLKGESSVDLYSQFISDYNGEDHYFTRIGPG--GLLNLDKIYKTHAVMDRIASFHL 171 (197)
Q Consensus 94 ~qDM~~PLshYFIsSSHNTYL~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~--g~ln~p~i~hg~t~ts~I~~~~v 171 (197)
+|||++|||||||+|||||||+|+||.|+||+|+|++||++||||||||||||++ |+ |+|+||+|+|++|+|++|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~Wdg~~~~~e---P~V~HG~tlts~i~f~~v 77 (257)
T cd08591 1 YQDMDQPLSHYFINSSHNTYLTGRQFGGKSSVEMYRQVLLSGCRCIELDCWDGKGEDEE---PIITHGKTMCTEILFKDV 77 (257)
T ss_pred CCccCcchhhheeecccCccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCCCCCC---CEEeeCCCCccCeEHHHH
Confidence 6999999999999999999999999999999999999999999999999999996 66 999999999999999999
Q ss_pred HHHHhhhcC----hhHHHhHH
Q psy9839 172 HYHQREHDT----NPVRETMR 188 (197)
Q Consensus 172 ~~~Ik~~Af----~~v~~~~~ 188 (197)
+++||+||| +||+|+++
T Consensus 78 ~~aIk~~AF~~s~yPvIlslE 98 (257)
T cd08591 78 IEAIAETAFKTSEYPVILSFE 98 (257)
T ss_pred HHHHHHHhccCCCCCEEEEEe
Confidence 999999999 79998763
No 21
>cd08625 PI-PLCc_beta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 3. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=2.7e-44 Score=314.44 Aligned_cols=92 Identities=34% Similarity=0.323 Sum_probs=87.8
Q ss_pred CCCCCCCccchhcccCCcceeecccccCCCcHHHHHHHHHhcCCCcceeeeeCC--CCCcccceeeecccccccchhhHH
Q psy9839 94 DLDMEMPLSHYFIASSHNTYLTGHQLKGESSVDLYSQFISDYNGEDHYFTRIGP--GGLLNLDKIYKTHAVMDRIASFHL 171 (197)
Q Consensus 94 ~qDM~~PLshYFIsSSHNTYL~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~--~g~ln~p~i~hg~t~ts~I~~~~v 171 (197)
.|||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||. +|+ |+|+||+|+|++|+|+||
T Consensus 1 ~~Dm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~e---P~v~Hg~t~t~~i~f~dv 77 (258)
T cd08625 1 SDDMNQPLSHYFINSSHNTYLTAGQLTGLSSVEMYRQVLLTGCRCIELDCWKGRPPEEE---PFITHGFTMTTEIPFKDV 77 (258)
T ss_pred CCccCcchhhheeecCccccccCCccCCccCHHHHHHHHHcCCCEEEEEecCCCCCCCC---CEEeeCCccccCcCHHHH
Confidence 389999999999999999999999999999999999999999999999999995 466 999999999999999999
Q ss_pred HHHHhhhcC----hhHHHhHH
Q psy9839 172 HYHQREHDT----NPVRETMR 188 (197)
Q Consensus 172 ~~~Ik~~Af----~~v~~~~~ 188 (197)
+++||+||| +||+++++
T Consensus 78 ~~~I~~~aF~~s~yPvIlslE 98 (258)
T cd08625 78 IEAIAESAFKTSPYPVILSFE 98 (258)
T ss_pred HHHHHHHhccCCCCCEEEEeh
Confidence 999999999 79998875
No 22
>cd08593 PI-PLCc_delta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is
Probab=100.00 E-value=3.1e-44 Score=313.89 Aligned_cols=92 Identities=38% Similarity=0.442 Sum_probs=89.2
Q ss_pred CCCCCCCccchhcccCCcceeecccccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccccchhhHHHH
Q psy9839 94 DLDMEMPLSHYFIASSHNTYLTGHQLKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMDRIASFHLHY 173 (197)
Q Consensus 94 ~qDM~~PLshYFIsSSHNTYL~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts~I~~~~v~~ 173 (197)
+|||++||+||||||||||||+|+||.|+||+|+|++||++||||+|||||||++|+ |+|+||+|+|++|+|++|++
T Consensus 1 ~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~~e---P~v~HG~t~t~~i~f~~v~~ 77 (257)
T cd08593 1 YQDMTQPLSHYFIASSHNTYLLEDQLKGPSSTEAYIRALKKGCRCVELDCWDGPDGE---PIIYHGHTLTSKILFKDVIQ 77 (257)
T ss_pred CCcCCcchhhheeecccCccccCCcccCCccHHHHHHHHHhCCcEEEEEeecCCCCC---cEEeeCCccccCcCHHHHHH
Confidence 699999999999999999999999999999999999999999999999999999998 99999999999999999999
Q ss_pred HHhhhcC----hhHHHhHH
Q psy9839 174 HQREHDT----NPVRETMR 188 (197)
Q Consensus 174 ~Ik~~Af----~~v~~~~~ 188 (197)
+||+||| +||+++++
T Consensus 78 ~I~~~aF~~s~yPvIlslE 96 (257)
T cd08593 78 AIREYAFKVSPYPVILSLE 96 (257)
T ss_pred HHHHHhccCCCCCEEEEee
Confidence 9999999 79998763
No 23
>cd08558 PI-PLCc_eukaryota Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins. This family corresponds to the catalytic domain present in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) and similar proteins. The higher eukaryotic PI-PLCs play a critical role in most signal transduction pathways, controlling numerous cellular events such as cell growth, proliferation, excitation and secretion. They strictly require Ca2+ for the catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated membrane phospholipids PI-analogues, phosphatidylinositol 4,5-bisphosphate (PIP2) and phosphatidylinositol-4-phosphate (PIP), to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein ki
Probab=100.00 E-value=7.1e-44 Score=306.67 Aligned_cols=92 Identities=38% Similarity=0.470 Sum_probs=89.0
Q ss_pred CCCCCCCccchhcccCCcceeecccccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccccchhhHHHH
Q psy9839 94 DLDMEMPLSHYFIASSHNTYLTGHQLKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMDRIASFHLHY 173 (197)
Q Consensus 94 ~qDM~~PLshYFIsSSHNTYL~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts~I~~~~v~~ 173 (197)
+|||++||+||||+|||||||+|+||.|+||+|+|++||++||||||||||||++|+ |+|+||+|+|++|+|++|++
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~~~Ss~~~y~~aL~~GcRcvElD~wdg~~~e---P~v~HG~t~ts~i~f~dv~~ 77 (226)
T cd08558 1 YQDMTQPLSHYFISSSHNTYLTGDQLTGESSVEAYIRALLRGCRCVELDCWDGPDGE---PVVYHGHTLTSKILFKDVIE 77 (226)
T ss_pred CCcCCccHHHhhhcccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCCCC---eEEeeCCCCccceEHHHHHH
Confidence 589999999999999999999999999999999999999999999999999999988 99999999999999999999
Q ss_pred HHhhhcC----hhHHHhHH
Q psy9839 174 HQREHDT----NPVRETMR 188 (197)
Q Consensus 174 ~Ik~~Af----~~v~~~~~ 188 (197)
+||+||| +||+++++
T Consensus 78 ~Ik~~aF~~s~yPvILslE 96 (226)
T cd08558 78 AIKEYAFVTSPYPVILSLE 96 (226)
T ss_pred HHHHHhcccCCCCeEEEEe
Confidence 9999999 79988764
No 24
>cd08598 PI-PLC1c_yeast Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C. This family corresponds to the catalytic domain present in a group of putative phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) encoded by PLC1 genes from yeasts, which are homologs of the delta isoforms of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The prototype of this CD is protein Plc1p encoded by PLC1 genes fro
Probab=100.00 E-value=8.5e-44 Score=307.05 Aligned_cols=92 Identities=26% Similarity=0.321 Sum_probs=88.6
Q ss_pred CCCCCCCccchhcccCCcceeecccccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccccchhhHHHH
Q psy9839 94 DLDMEMPLSHYFIASSHNTYLTGHQLKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMDRIASFHLHY 173 (197)
Q Consensus 94 ~qDM~~PLshYFIsSSHNTYL~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts~I~~~~v~~ 173 (197)
.|||++||+||||+|||||||+|+||.|+||+|+|++||++||||||||||||++|+ |+|+||+|+|++|+|++|++
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~~e---p~V~HG~t~ts~i~f~dv~~ 77 (231)
T cd08598 1 EEDLSRPLNEYFISSSHNTYLLGRQLAGDSSVEGYIRALQRGCRCVEIDVWDGDDGE---PVVTHGYTLTSSVPFRDVCR 77 (231)
T ss_pred CCccccchHhheeeccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCCCC---cEEeeCCCCcCceEHHHHHH
Confidence 489999999999999999999999999999999999999999999999999999887 99999999999999999999
Q ss_pred HHhhhcC----hhHHHhHH
Q psy9839 174 HQREHDT----NPVRETMR 188 (197)
Q Consensus 174 ~Ik~~Af----~~v~~~~~ 188 (197)
+||+||| +||+++++
T Consensus 78 ~Ik~~aF~~s~yPvILslE 96 (231)
T cd08598 78 AIKKYAFVTSPYPLILSLE 96 (231)
T ss_pred HHHHHhccCCCCCEEEEEe
Confidence 9999999 78988763
No 25
>cd08628 PI-PLCc_gamma2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 2. PI-PLC is a signaling enzyme that hydrolyze the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw
Probab=100.00 E-value=1.2e-43 Score=309.61 Aligned_cols=92 Identities=35% Similarity=0.431 Sum_probs=88.9
Q ss_pred CCCCCCCccchhcccCCcceeecccccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccccchhhHHHH
Q psy9839 94 DLDMEMPLSHYFIASSHNTYLTGHQLKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMDRIASFHLHY 173 (197)
Q Consensus 94 ~qDM~~PLshYFIsSSHNTYL~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts~I~~~~v~~ 173 (197)
.|||++||+||||+|||||||+|+||.|+||+|+|++||++||||||||||||++|+ |+|+||+|+|++|.|+||++
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~Wdg~~~e---P~V~HG~t~ts~i~f~dv~~ 77 (254)
T cd08628 1 PQDMNNPLSHYWISSSHNTYLTGDQLRSESSTEAYIRCLRMGCRCIELDCWDGPDGK---PIIYHGWTRTTKIKFDDVVQ 77 (254)
T ss_pred CCcccchHHhhheecCcCCcccCCeeecCCCHHHHHHHHHcCCcEEEEEeecCCCCC---eEEeeCCCccCCcCHHHHHH
Confidence 489999999999999999999999999999999999999999999999999999998 99999999999999999999
Q ss_pred HHhhhcC----hhHHHhHH
Q psy9839 174 HQREHDT----NPVRETMR 188 (197)
Q Consensus 174 ~Ik~~Af----~~v~~~~~ 188 (197)
+||+||| +||+++++
T Consensus 78 ~I~~~AF~~s~yPvIlslE 96 (254)
T cd08628 78 AIKDHAFVTSEYPVILSIE 96 (254)
T ss_pred HHHHHhccCCCCCEEEEEe
Confidence 9999999 89988763
No 26
>cd08627 PI-PLCc_gamma1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw
Probab=100.00 E-value=1.8e-43 Score=304.53 Aligned_cols=92 Identities=34% Similarity=0.486 Sum_probs=89.0
Q ss_pred CCCCCCCccchhcccCCcceeecccccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccccchhhHHHH
Q psy9839 94 DLDMEMPLSHYFIASSHNTYLTGHQLKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMDRIASFHLHY 173 (197)
Q Consensus 94 ~qDM~~PLshYFIsSSHNTYL~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts~I~~~~v~~ 173 (197)
.+||++|||||||+|||||||+|+||.|+||+++|++||++||||+|+|||||++|+ |+|+||+|+|++|+|++|++
T Consensus 1 ~~DM~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcR~vElD~wdg~dge---PvV~Hg~tlts~i~f~dv~~ 77 (229)
T cd08627 1 PEEMNNPLSHYWISSSHNTYLTGDQFSSESSLEAYARCLRMGCRCIELDCWDGPDGM---PVIYHGHTLTTKIKFSDVLH 77 (229)
T ss_pred CccccchhhhheeecCcCccccCCccCCcccHHHHHHHHHhCCCEEEEEeecCCCCC---EEEEeCCcCCCceEHHHHHH
Confidence 489999999999999999999999999999999999999999999999999999998 99999999999999999999
Q ss_pred HHhhhcC----hhHHHhHH
Q psy9839 174 HQREHDT----NPVRETMR 188 (197)
Q Consensus 174 ~Ik~~Af----~~v~~~~~ 188 (197)
+||+||| +||+++++
T Consensus 78 ~I~~~AF~~S~yPvIlslE 96 (229)
T cd08627 78 TIKEHAFVTSEYPIILSIE 96 (229)
T ss_pred HHHHhhccCCCCCEEEEEc
Confidence 9999999 79998764
No 27
>cd08599 PI-PLCc_plant Catalytic domain of plant phosphatidylinositide-specific phospholipases C. This family corresponds to the catalytic domain present in a group of phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11) encoded by PLC genes from higher plants, which are homologs of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The domain arrangement of plant PI-PLCs is structurally similar to the mammalian PLC-zeta isoform, whi
Probab=100.00 E-value=2e-42 Score=298.09 Aligned_cols=92 Identities=29% Similarity=0.259 Sum_probs=89.0
Q ss_pred CCCCCCCccchhcccCCcceeecccccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccccchhhHHHH
Q psy9839 94 DLDMEMPLSHYFIASSHNTYLTGHQLKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMDRIASFHLHY 173 (197)
Q Consensus 94 ~qDM~~PLshYFIsSSHNTYL~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts~I~~~~v~~ 173 (197)
+|||++|||||||+|||||||+|+||.|+||+++|++||++||||||||||||++|+ |+|+||+|+|++|.|.+|++
T Consensus 1 ~qDm~~PLs~YfI~sSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~Wdg~~~e---p~V~HG~t~ts~i~f~dvl~ 77 (228)
T cd08599 1 HHDMTAPLSHYFIFSSHNSYLTGNQLSSRSSTAPIIEALLRGCRVIELDLWPGGRGD---ICVLHGGTLTKPVKFEDCIK 77 (228)
T ss_pred CCcCCcchhhhEEeccccccccCCccCCccCHHHHHHHHHhCCCEEEEEeecCCCCC---eEEEeCCCCcCCcCHHHHHH
Confidence 699999999999999999999999999999999999999999999999999999988 99999999999999999999
Q ss_pred HHhhhcC----hhHHHhHH
Q psy9839 174 HQREHDT----NPVRETMR 188 (197)
Q Consensus 174 ~Ik~~Af----~~v~~~~~ 188 (197)
+||+||| +||+++++
T Consensus 78 ~I~~~aF~~s~yPvILslE 96 (228)
T cd08599 78 AIKENAFTASEYPVIITLE 96 (228)
T ss_pred HHHHHhccCCCCCEEEEEe
Confidence 9999999 69988764
No 28
>cd08592 PI-PLCc_gamma Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain.The PLC catalytic core domain is a TIM barrel with two highl
Probab=100.00 E-value=9.6e-42 Score=293.95 Aligned_cols=92 Identities=38% Similarity=0.527 Sum_probs=89.0
Q ss_pred CCCCCCCccchhcccCCcceeecccccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccccchhhHHHH
Q psy9839 94 DLDMEMPLSHYFIASSHNTYLTGHQLKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMDRIASFHLHY 173 (197)
Q Consensus 94 ~qDM~~PLshYFIsSSHNTYL~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts~I~~~~v~~ 173 (197)
+|||++||+||||+|||||||+|+||.|+||+++|++||++||||+|+|||+|++|+ |+|+||+|+|++|+|++|++
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~ess~eay~~AL~~GcR~vElDvwdg~dge---PvV~HG~tlts~i~f~dv~~ 77 (229)
T cd08592 1 PQDMNNPLSHYWIASSHNTYLTGDQLSSESSLEAYARCLRMGCRCIELDCWDGPDGM---PIIYHGHTLTSKIKFMDVLK 77 (229)
T ss_pred CCcccchhHhheeeccccccccCCccCCccCHHHHHHHHHhCCCEEEEEeecCCCCC---EEEEeCCcCCCCcCHHHHHH
Confidence 589999999999999999999999999999999999999999999999999999998 99999999999999999999
Q ss_pred HHhhhcC----hhHHHhHH
Q psy9839 174 HQREHDT----NPVRETMR 188 (197)
Q Consensus 174 ~Ik~~Af----~~v~~~~~ 188 (197)
+||+||| +||+++++
T Consensus 78 ~I~~~aF~~s~yPvIlslE 96 (229)
T cd08592 78 TIKEHAFVTSEYPVILSIE 96 (229)
T ss_pred HHHHHhccCCCCCEEEEEe
Confidence 9999999 89988763
No 29
>cd08597 PI-PLCc_PRIP_metazoa Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein. This family corresponds to the catalytic domain present in metazoan phospholipase C related, but catalytically inactive proteins (PRIP), which belong to a group of novel Inositol 1,4,5-trisphosphate (InsP3) binding protein. PRIP has a primary structure and domain architecture, incorporating a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain with highly conserved X- and Y-regions split by a linker sequence, and a C-terminal C2 domain, similar to phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11)-delta isoforms. Due to replacement of critical catalytic residues, PRIP do not have PLC enzymatic activity. PRIP consists of two subfamilies, PRIP-1(previously known as p130 or PLC-1), which is predominantly expressed in the brain, and PRIP-2 (previously known as PLC-2), which exhibits a relatively ubiquitous expression. Experiment
Probab=100.00 E-value=2e-41 Score=296.62 Aligned_cols=92 Identities=36% Similarity=0.418 Sum_probs=89.1
Q ss_pred CCCCCCCccchhcccCCcceeecccccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccccchhhHHHH
Q psy9839 94 DLDMEMPLSHYFIASSHNTYLTGHQLKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMDRIASFHLHY 173 (197)
Q Consensus 94 ~qDM~~PLshYFIsSSHNTYL~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts~I~~~~v~~ 173 (197)
+|||++||+||||+|||||||+|+||.|+||+++|++||++||||+|+|||+|++|+ |+|+||+|+|++|+|+||++
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcR~vElD~w~g~~ge---pvV~Hg~tlts~i~f~dv~~ 77 (260)
T cd08597 1 CQDMTQPLSHYFIASSHNTYLIEDQLRGPSSVEGYVRALQRGCRCVELDCWDGPNGE---PVIYHGHTLTSKISFRSVIE 77 (260)
T ss_pred CCcccchHHhhhhccccCccccCCeecCccCHHHHHHHHHhCCCEEEEEeEcCCCCC---EEEEeCCccccceEHHHHHH
Confidence 699999999999999999999999999999999999999999999999999999998 99999999999999999999
Q ss_pred HHhhhcC----hhHHHhHH
Q psy9839 174 HQREHDT----NPVRETMR 188 (197)
Q Consensus 174 ~Ik~~Af----~~v~~~~~ 188 (197)
+||+||| +||+++++
T Consensus 78 ~I~~~aF~~s~yPvIlslE 96 (260)
T cd08597 78 AINEYAFVASEYPLILCIE 96 (260)
T ss_pred HHHHHhccCCCCCEEEEEe
Confidence 9999999 79988763
No 30
>smart00148 PLCXc Phospholipase C, catalytic domain (part); domain X. Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs.
Probab=99.93 E-value=7.2e-27 Score=185.87 Aligned_cols=91 Identities=40% Similarity=0.464 Sum_probs=86.4
Q ss_pred CCCCCCccchhcccCCcceeecccccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccccchhhHHHHH
Q psy9839 95 LDMEMPLSHYFIASSHNTYLTGHQLKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMDRIASFHLHYH 174 (197)
Q Consensus 95 qDM~~PLshYFIsSSHNTYL~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts~I~~~~v~~~ 174 (197)
|||++||++|||.+|||||++|+|+.++++..+|.++|.+|||++|+|||++++|. |+|+||++++..+.|.+|++.
T Consensus 1 ~d~~~pLs~~~I~gtH~sy~~~~~~~~~~q~~~i~~qL~~GvR~~dirv~~~~~~~---~~v~Hg~~~~~~~~~~dvL~~ 77 (135)
T smart00148 1 QDMDKPLSHYFIPSSHNTYLTGKQLWGESSVEGYIQALDHGCRCVELDCWDGPDGE---PVIYHGHTFTLPIKLSEVLEA 77 (135)
T ss_pred CCCCccHhhCEEcccccccccCccccCcccHHHHHHHHHhCCCEEEEEcccCCCCC---EEEEECCcccccEEHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999887 899999999999999999999
Q ss_pred HhhhcC----hhHHHhHH
Q psy9839 175 QREHDT----NPVRETMR 188 (197)
Q Consensus 175 Ik~~Af----~~v~~~~~ 188 (197)
||++|| +||++.++
T Consensus 78 i~~fl~~~p~e~VIl~l~ 95 (135)
T smart00148 78 IKDFAFVTSPYPVILSLE 95 (135)
T ss_pred HHHHHHhCCCCcEEEeeh
Confidence 999998 56766655
No 31
>cd00137 PI-PLCc Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C. This subfamily corresponds to the catalytic domain present in prokaryotic and eukaryotic phosphoinositide-specific phospholipase C (PI-PLC), which is a ubiquitous enzyme catalyzing the cleavage of the sn3-phosphodiester bond in the membrane phosphoinositides (phosphatidylinositol, PI; Phosphatidylinositol-4-phosphate, PIP; phosphatidylinositol 4,5-bisphosphate, PIP2) to yield inositol phosphates (inositol monosphosphate, InsP; inositol diphosphate, InsP2; inositol trisphosphate, InsP3) and diacylglycerol (DAG). The higher eukaryotic PI-PLCs (EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. They play a critical role in most signal transduction pathways, controlling numerous cellular events, such as cell growth, proliferation, excitation and secretion. These PI-PLCs strictly require Ca2+ for their catalytic a
Probab=99.91 E-value=1.6e-25 Score=196.38 Aligned_cols=90 Identities=20% Similarity=0.201 Sum_probs=84.1
Q ss_pred CCCCCCCccchhcccCCcceeeccccc-----CCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccccchh
Q psy9839 94 DLDMEMPLSHYFIASSHNTYLTGHQLK-----GESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMDRIAS 168 (197)
Q Consensus 94 ~qDM~~PLshYFIsSSHNTYL~G~Ql~-----g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts~I~~ 168 (197)
++||++||+||||.+|||||+.|+|+. |+++.++|+++|.+||||+|||||+|++|. |+|+||++++ .+.|
T Consensus 1 ~~d~~~pLs~~~IpgSHnS~~~~~~~~~~~~~~~tq~~~~~~qL~~G~R~lDir~~~~~~~~---~~v~HG~~~~-~~~f 76 (274)
T cd00137 1 HHPDTQPLAHYSIPGTHDTYLTAGQFTIKQVWGLTQTEMYRQQLLSGCRCVDIRCWDGKPEE---PIIYHGPTFL-DIFL 76 (274)
T ss_pred CCCCCcCHHHeEEcCchHhhhcCCCCccccccCcCcHHHHHHHHHcCCcEEEEEeecCCCCC---eEEEECCccc-CcCH
Confidence 589999999999999999999999998 999999999999999999999999998876 8999999998 9999
Q ss_pred hHHHHHHhhhcC----hhHHHhH
Q psy9839 169 FHLHYHQREHDT----NPVRETM 187 (197)
Q Consensus 169 ~~v~~~Ik~~Af----~~v~~~~ 187 (197)
.+|+++|+++|| +||++.+
T Consensus 77 ~dvl~~i~~fl~~~p~e~vIlsl 99 (274)
T cd00137 77 KEVIEAIAQFLKKNPPETIIMSL 99 (274)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEE
Confidence 999999999998 5666543
No 32
>PF00388 PI-PLC-X: Phosphatidylinositol-specific phospholipase C, X domain This entry is for the whole phospholipase C protein; InterPro: IPR000909 Phosphatidylinositol-specific phospholipase C (3.1.4.11 from EC), a eukaryotic intracellular enzyme, plays an important role in signal transduction processes []. It catalyzes the hydrolysis of 1-phosphatidyl-D-myo-inositol-3,4,5-triphosphate into the second messenger molecules diacylglycerol and inositol-1,4,5-triphosphate. This catalytic process is tightly regulated by reversible phosphorylation and binding of regulatory proteins [, , ]. In mammals, there are at least 6 different isoforms of PI-PLC, they differ in their domain structure, their regulation, and their tissue distribution. Lower eukaryotes also possess multiple isoforms of PI-PLC. All eukaryotic PI-PLCs contain two regions of homology, sometimes referred to as the 'X-box' and 'Y-box'. The order of these two regions is always the same (NH2-X-Y-COOH), but the spacing is variable. In most isoforms, the distance between these two regions is only 50-100 residues but in the gamma isoforms one PH domain, two SH2 domains, and one SH3 domain are inserted between the two PLC-specific domains. The two conserved regions have been shown to be important for the catalytic activity. By profile analysis, we could show that sequences with significant similarity to the X-box domain occur also in prokaryotic and trypanosome PI-specific phospholipases C. Apart from this region, the prokaryotic enzymes show no similarity to their eukaryotic counterparts.; GO: 0004629 phospholipase C activity, 0006629 lipid metabolic process, 0035556 intracellular signal transduction; PDB: 2FJU_B 2ZKM_X 3V18_A 3V1H_A 3V16_A 3QR1_D 3EA3_A 3EA1_A 2OR2_A 1T6M_B ....
Probab=99.84 E-value=1.5e-21 Score=155.11 Aligned_cols=81 Identities=25% Similarity=0.157 Sum_probs=73.9
Q ss_pred CCCCccchhcccCCcceeecccccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccccchhhHHHHHHh
Q psy9839 97 MEMPLSHYFIASSHNTYLTGHQLKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMDRIASFHLHYHQR 176 (197)
Q Consensus 97 M~~PLshYFIsSSHNTYL~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts~I~~~~v~~~Ik 176 (197)
|+.|+|||||++|||||++++|+.+++....|.+.|..|||+++|+||.++++. +.|+||++.++.++|.+|++.|+
T Consensus 1 ms~P~th~si~~sh~t~~~~~~~~~~~Q~~~i~~QL~~GiR~lDlrv~~~~~~~---~~v~Hg~~~~~~~~~~dvL~~i~ 77 (146)
T PF00388_consen 1 MSIPGTHDSISSSHNTYLTGGQLWSKTQSWSIREQLESGIRYLDLRVWDGNDGE---LVVYHGITSTSGITFEDVLNDIR 77 (146)
T ss_dssp TCSEGGGEEEGCBSSTTBSSTSHHC-B-SHHHHHHHHTT--EEEEEEEEETTSS---EEEEETTSEE-EEEHHHHHHHHH
T ss_pred CCCCcccceecccCCCcccccccccCcchHhHHHHHhccCceEEEEEEcCCCCc---eEEEeCCEeeeeEeHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999886 79999999999999999999999
Q ss_pred hhcC
Q psy9839 177 EHDT 180 (197)
Q Consensus 177 ~~Af 180 (197)
+++|
T Consensus 78 ~fl~ 81 (146)
T PF00388_consen 78 DFLF 81 (146)
T ss_dssp HHTT
T ss_pred HHHh
Confidence 9998
No 33
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=99.36 E-value=1.2e-13 Score=100.19 Aligned_cols=64 Identities=25% Similarity=0.365 Sum_probs=56.9
Q ss_pred CCCCCHHHHHHHHHHHcCCch---HHHHHHHhhhCCCcccccCCCCCHHHHHHHHcCCCCCCCcccc
Q psy9839 26 CPILYTTGCIELLEYGQLQFR---HGNHRRTQRHEPDSGLRSQHCLSFEGFARYLMDKDNFAFASER 89 (197)
Q Consensus 26 ~~~l~~~~l~~FL~~eQ~e~~---~~~~~iI~kyep~~~~r~~~~ls~~gF~~fL~S~~n~~~~~~~ 89 (197)
...|+.++|.+||+++|++.. ..|++||++|+|+...+....||++||++||+|++|.+++|.+
T Consensus 13 ~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S~~N~~~~~~~ 79 (83)
T PF09279_consen 13 KEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFSDENSIFDPEH 79 (83)
T ss_dssp SSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHSTTCBSS-HHH
T ss_pred CCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCCCcCCCCChHh
Confidence 678999999999999999953 3899999999998877788999999999999999999999987
No 34
>cd08589 PI-PLCc_SaPLC1_like Catalytic domain of Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1-like proteins. This subfamily corresponds to the catalytic domain present in Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1 (SaPLC1) and similar proteins. The typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) catalyzes Ca2+-independent hydrolysis of the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). The catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. In contrast, SaPLC1 is the first known natural Ca2+-dependent bacterial PI-PLC. It is more closely related to the eukaryotic PI-PLCs rather than the typical bacterial PI-PLCs. It participates in PI metabolism to generate myo-inositol-1-phosphate and myo-inositol-1:2-cy
Probab=99.04 E-value=6.6e-11 Score=107.21 Aligned_cols=93 Identities=12% Similarity=0.017 Sum_probs=74.2
Q ss_pred CCCCCCccchhcccCCcceeec------------ccc--cCCCcHHHHHHHHHhcCCCcceeeeeCCCCCc---------
Q psy9839 95 LDMEMPLSHYFIASSHNTYLTG------------HQL--KGESSVDLYSQFISDYNGEDHYFTRIGPGGLL--------- 151 (197)
Q Consensus 95 qDM~~PLshYFIsSSHNTYL~G------------~Ql--~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~l--------- 151 (197)
.+.+.||++|++-.|||+|..| +|+ +...+-....++|..|+|.+|||+|..+.|-+
T Consensus 3 ~~~~~pln~~~~igtHNSY~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~QLd~GvR~LELDv~~d~~gg~~a~P~~~~~ 82 (324)
T cd08589 3 AADALRLNQIQVVGTHNSYHKEIDPAELALLAVNPPLAEGLDYSHPPLADQLDSGVRQLELDVWADPEGGRYAHPLGLAP 82 (324)
T ss_pred ccCCCCccccEEEeecccccccCCchhhhhhcccccccccccCCCccHHHHHhhCcceEEEEEeecCCcccccccccccc
Confidence 4567899999999999999998 676 33445556788999999999999997654211
Q ss_pred --------ccceeeecccc---cccchhhHHHHHHhhhcC-----hhHHHhH
Q psy9839 152 --------NLDKIYKTHAV---MDRIASFHLHYHQREHDT-----NPVRETM 187 (197)
Q Consensus 152 --------n~p~i~hg~t~---ts~I~~~~v~~~Ik~~Af-----~~v~~~~ 187 (197)
+--+|.|+.++ |+-..|.++++.||++++ +||.|++
T Consensus 83 ~~~~~~~~~g~~V~H~~~~d~~t~C~~l~~cL~~Ik~W~~anP~hvPv~I~L 134 (324)
T cd08589 83 DDAAVMKKPGWKVSHIPDLDNRNNCVTLEDCLDDVRAWSDAHPGHVPIFIKL 134 (324)
T ss_pred cccccccCCCeEEEcCCCcCCCCChhhHHHHHHHHHHHHHhCCCcccEEEEE
Confidence 11388999888 888899999999999998 4666654
No 35
>cd08590 PI-PLCc_Rv2075c_like Catalytic domain of uncharacterized Mycobacterium tuberculosis Rv2075c-like proteins. This subfamily corresponds to the catalytic domain present in uncharacterized Mycobacterium tuberculosis Rv2075c and its homologs. Members in this family are more closely related to the Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1(SaPLC1)-like proteins rather than the typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). In contrast, SaPLC1-like proteins have two Ca2+-chelating amino acid substitutions which convert them to metal-dependent bacterial PI-PLC. Rv2075c and its homologs have the same amino acid substitutions as well, which might suggest they have metal-dependent PI-PLC activity.
Probab=98.83 E-value=2.7e-09 Score=94.05 Aligned_cols=83 Identities=11% Similarity=-0.088 Sum_probs=67.1
Q ss_pred CCCCCCCccchhcccCCcceeeccccc----------CCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeeccccc
Q psy9839 94 DLDMEMPLSHYFIASSHNTYLTGHQLK----------GESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVM 163 (197)
Q Consensus 94 ~qDM~~PLshYFIsSSHNTYL~G~Ql~----------g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~t 163 (197)
..||+.||++|+|-.|||+|..+..-. +....-.+.+.|..|+|.+|+|+|..+++ +.+.||....
T Consensus 3 ~ld~~~pL~~~~~~gTHNS~~s~~~~~~~~~~~~~~~~~nQ~~sI~~QL~~GvR~LdLdv~~~~~~----l~v~Hg~~~~ 78 (267)
T cd08590 3 NLDSNAPLCQAQILGTHNSYNSRAYGYGNRYHGVRYLDPNQELSITDQLDLGARFLELDVHWTTGD----LRLCHGGDHG 78 (267)
T ss_pred CCCCCCchhhceeeeecccccccccccccccccceeeccccCcCHHHHHhhCCcEEEEeeeeCCCC----EEEEccCccc
Confidence 479999999999999999999865432 23333456789999999999999987654 5899997664
Q ss_pred c-------cchhhHHHHHHhhhcC
Q psy9839 164 D-------RIASFHLHYHQREHDT 180 (197)
Q Consensus 164 s-------~I~~~~v~~~Ik~~Af 180 (197)
. ...|.++++.||++++
T Consensus 79 ~~~~~~~~~~~l~d~L~eI~~fL~ 102 (267)
T cd08590 79 YLGVCSSEDRLFEDGLNEIADWLN 102 (267)
T ss_pred cccccccccchHHHHHHHHHHHHH
Confidence 3 4689999999999876
No 36
>cd08557 PI-PLCc_bacteria_like Catalytic domain of bacterial phosphatidylinositol-specific phospholipase C and similar proteins. This subfamily corresponds to the catalytic domain present in bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and their sequence homologs found in eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Its catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. Eukaryotic homologs in this family are named as phosphatidylinositol-specific phospholipase C X
Probab=98.39 E-value=2.1e-07 Score=79.15 Aligned_cols=83 Identities=12% Similarity=0.022 Sum_probs=67.0
Q ss_pred CCCCCCccchhcccCCcceeecccc-------cCCCcHHHHHHHHHhcCCCcceeeeeCC-CCCcccceeeecccccccc
Q psy9839 95 LDMEMPLSHYFIASSHNTYLTGHQL-------KGESSVDLYSQFISDYNGEDHYFTRIGP-GGLLNLDKIYKTHAVMDRI 166 (197)
Q Consensus 95 qDM~~PLshYFIsSSHNTYL~G~Ql-------~g~SS~e~Y~~aL~~g~r~~e~d~~~g~-~g~ln~p~i~hg~t~ts~I 166 (197)
.+.+.||+++.|-.|||+|..+... .+......+...|..|+|.++||+|... .|. ..++||.......
T Consensus 3 ~~~~~~l~~~~ipGtHnS~~~~~~~~~~~~~~~~~~Q~~~i~~QL~~GiR~~dlr~~~~~~~~~---~~~~H~~~~~~~~ 79 (271)
T cd08557 3 LLDDLPLSQLSIPGTHNSYAYTIDGNSPIVSKWSKTQDLSITDQLDAGVRYLDLRVAYDPDDGD---LYVCHGLFLLNGQ 79 (271)
T ss_pred ccccCchhcccccccchhceeccCCCchhhhhHHhccCCCHHHHHhcCceEEEEEeeeecCCCc---EEEEccccccCcc
Confidence 3568999999999999999887663 2233334567899999999999999876 233 6899998776689
Q ss_pred hhhHHHHHHhhhcC
Q psy9839 167 ASFHLHYHQREHDT 180 (197)
Q Consensus 167 ~~~~v~~~Ik~~Af 180 (197)
.+.+|++.|+++..
T Consensus 80 ~~~~vL~~i~~fl~ 93 (271)
T cd08557 80 TLEDVLNEVKDFLD 93 (271)
T ss_pred cHHHHHHHHHHHHH
Confidence 99999999999765
No 37
>cd08555 PI-PLCc_GDPD_SF Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily. The PI-PLC-like phosphodiesterases superfamily represents the catalytic domains of bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11), glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria, as well as their uncharacterized homologs found in organisms ranging from bacteria and archaea to metazoans, plants, and fungi. PI-PLCs are ubiquitous enzymes hydrolyzing the membrane lipid phosphoinositides to yield two important second messengers, inositol phosphates and diacylglycerol (DAG). GP-GDEs play essential roles in glycerol metabolism and catalyze the hydrolysis of glycerophosph
Probab=98.19 E-value=2.1e-06 Score=70.16 Aligned_cols=66 Identities=12% Similarity=0.027 Sum_probs=57.2
Q ss_pred CCcceeecccccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeeccccc------ccchhhHHHHHHhhhcC
Q psy9839 109 SHNTYLTGHQLKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVM------DRIASFHLHYHQREHDT 180 (197)
Q Consensus 109 SHNTYL~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~t------s~I~~~~v~~~Ik~~Af 180 (197)
+|+-|-...+ +.+..++..||..||+.+|+|+|...+|. |+|.|+.++. ....|.++++.++++++
T Consensus 3 aHRG~~~~~p---eNT~~af~~a~~~G~~~iE~DV~lt~Dg~---lvv~HD~~~~r~~~~~~~ptl~evl~~~~~~~~ 74 (179)
T cd08555 3 SHRGYSQNGQ---ENTLEAFYRALDAGARGLELDVRLTKDGE---LVVYHGPTLDRTTAGILPPTLEEVLELIADYLK 74 (179)
T ss_pred ecCCCCCCCC---ccHHHHHHHHHHcCCCEEEEEEeEcCCCe---EEEECCCccccccCCCCCCCHHHHHHHHHhhhh
Confidence 6777655443 77889999999999999999999999997 9999999985 56899999999999654
No 38
>cd08588 PI-PLCc_At5g67130_like Catalytic domain of Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs. This subfamily corresponds to the catalytic domain present in Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs. Members in this family show high sequence similarity to bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participates in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG).
Probab=97.07 E-value=0.00057 Score=60.48 Aligned_cols=80 Identities=10% Similarity=0.036 Sum_probs=61.8
Q ss_pred CCCCCccchhcccCCcceeecccc--cCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeeccccc-ccchhhHHH
Q psy9839 96 DMEMPLSHYFIASSHNTYLTGHQL--KGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVM-DRIASFHLH 172 (197)
Q Consensus 96 DM~~PLshYFIsSSHNTYL~G~Ql--~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~t-s~I~~~~v~ 172 (197)
--++||++|.+-.+||+|..+..- .+..........|..|+|-+++|++.-.++ ..+.||...+ +...+.+++
T Consensus 7 ~~~~~~~~it~~gtHNS~~~~~~~~~~~~nQ~~si~~QL~~GiR~l~ld~~~~~~~----~~lcH~~~~~~~~~~~~d~L 82 (270)
T cd08588 7 LCDRTYDEYTFLTTHNSFANSEDAFFLAPNQEDDITKQLDDGVRGLMLDIHDANGG----LRLCHSVCGLGDGGPLSDVL 82 (270)
T ss_pred cCCcccccceeEEeccCccccCCCcccccccCCCHHHHHHhCcceEeeeEEecCCC----EEEECCCccccCCccHHHHH
Confidence 347899999999999999887542 333333445678999999999999886544 4889986544 378999999
Q ss_pred HHHhhhc
Q psy9839 173 YHQREHD 179 (197)
Q Consensus 173 ~~Ik~~A 179 (197)
+.|+.+.
T Consensus 83 ~~i~~fL 89 (270)
T cd08588 83 REVVDFL 89 (270)
T ss_pred HHHHHHH
Confidence 9999864
No 39
>cd08586 PI-PLCc_BcPLC_like Catalytic domain of Bacillus cereus phosphatidylinositol-specific phospholipases C and similar proteins. This subfamily corresponds to the catalytic domain present in Bacillus cereus phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and its sequence homologs found in bacteria and eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Their catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. This family also includes some uncharacterized eukaryotic homologs, which
Probab=96.45 E-value=0.0027 Score=56.31 Aligned_cols=80 Identities=9% Similarity=-0.157 Sum_probs=62.4
Q ss_pred CCCCCccchhcccCCcceeeccc--ccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccccchhhHHHH
Q psy9839 96 DMEMPLSHYFIASSHNTYLTGHQ--LKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMDRIASFHLHY 173 (197)
Q Consensus 96 DM~~PLshYFIsSSHNTYL~G~Q--l~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts~I~~~~v~~ 173 (197)
+-+.||++.-|-.|||++-.... ..+.+....+..-|..|+|..+|+|+....|. -.++||..... ..|.+|+.
T Consensus 5 ~d~~~l~~lsipGTHdS~~~~~~~~~~~~~Q~~~i~~QL~~GiR~lDiR~~~~~~~~---l~~~Hg~~~~~-~~~~dvL~ 80 (279)
T cd08586 5 PDDTPLSELSIPGTHDSGALHGGLSSSVQCQDWSIAEQLNAGIRFLDIRLRLIDNND---LAIHHGPFYQG-LTFGDVLN 80 (279)
T ss_pred CCCCEeeeeeecccchhccccCCCccceecCCCCHHHHHhcCCeEEEEEeeecCCCe---EEEEccCcccc-CcHHHHHH
Confidence 34789999999999998653322 34555556678889999999999998866344 48999976644 89999999
Q ss_pred HHhhhc
Q psy9839 174 HQREHD 179 (197)
Q Consensus 174 ~Ik~~A 179 (197)
.|+.+.
T Consensus 81 ~i~~FL 86 (279)
T cd08586 81 ECYSFL 86 (279)
T ss_pred HHHHHH
Confidence 999864
No 40
>PF03009 GDPD: Glycerophosphoryl diester phosphodiesterase family; InterPro: IPR004129 Glycerophosphoryl diester phosphodiesterases display broad specificity for glycerophosphodiesters; glycerophosphocholine, glycerophosphoethanolamine, glycerophosphoglycerol, and bis(glycerophosphoglycerol) all of which are are hydrolysed by this enzyme.; GO: 0008889 glycerophosphodiester phosphodiesterase activity, 0006071 glycerol metabolic process; PDB: 3I10_A 2P76_H 2OOG_F 3KS6_D 3KS5_A 2PZ0_B 1YDY_B 1T8Q_A 1O1Z_A 3L12_B ....
Probab=95.89 E-value=0.0096 Score=48.74 Aligned_cols=40 Identities=8% Similarity=0.121 Sum_probs=33.9
Q ss_pred cCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccc
Q psy9839 120 KGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAV 162 (197)
Q Consensus 120 ~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ 162 (197)
..+.|.+++..|+..|++.+|+|+|--.+|. |+|.|-.++
T Consensus 8 ~pENTl~af~~A~~~G~~~iE~Dv~lTkDg~---~Vv~HD~~l 47 (256)
T PF03009_consen 8 APENTLAAFRAAIELGADGIELDVQLTKDGV---PVVFHDDTL 47 (256)
T ss_dssp SSTTSHHHHHHHHHTTSSEEEEEEEE-TTS----EEE-SSSBS
T ss_pred ChhhHHHHHHHHHHhCCCeEcccccccCCce---eEeccCCee
Confidence 3488999999999999999999999999998 999999766
No 41
>cd08556 GDPD Glycerophosphodiester phosphodiesterase domain as found in prokaryota and eukaryota, and similar proteins. The typical glycerophosphodiester phosphodiesterase domain (GDPD) consists of a TIM barrel and a small insertion domain named the GDPD-insertion (GDPD-I) domain, which is specific for GDPD proteins. This family corresponds to both typical GDPD domain and GDPD-like domain which lacks the GDPD-I region. Members in this family mainly consist of a large family of prokaryotic and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), and a number of uncharacterized homologs. Sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria are also included in this family. GDPD plays an essential role in glycerol metabolism and catalyzes the hydrolysis of glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcoho
Probab=95.80 E-value=0.013 Score=46.54 Aligned_cols=51 Identities=4% Similarity=-0.060 Sum_probs=45.1
Q ss_pred ccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccccchhhHHHHHHhh
Q psy9839 119 LKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMDRIASFHLHYHQRE 177 (197)
Q Consensus 119 l~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts~I~~~~v~~~Ik~ 177 (197)
...+-|.++|..|+..|++.+|+|++--.+|. |+|.|- -.+|.++++..++
T Consensus 10 ~~pent~~a~~~a~~~g~~~iE~Dv~~tkDg~---~vv~Hd-----i~tL~e~l~~~~~ 60 (189)
T cd08556 10 EAPENTLAAFRKALEAGADGVELDVQLTKDGV---LVVIHD-----IPTLEEVLELVKG 60 (189)
T ss_pred CCCchHHHHHHHHHHcCCCEEEEEeeEcCCCC---EEEEcC-----CCCHHHHHHhccc
Confidence 34588999999999999999999999989998 899996 6788888888876
No 42
>cd08579 GDPD_memb_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial glycerophosphodiester phosphodiesterases. In addition to a C-terminal GDPD domain, most members in this family have an N-terminus that functions as a membrane anchor.
Probab=93.71 E-value=0.063 Score=44.86 Aligned_cols=40 Identities=8% Similarity=-0.053 Sum_probs=36.5
Q ss_pred cCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccc
Q psy9839 120 KGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAV 162 (197)
Q Consensus 120 ~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ 162 (197)
.-+.+..+|..|+..|+..+|+|++--.+|. |+|.|-.++
T Consensus 11 ~pENT~~af~~A~~~Gad~vE~DV~~T~Dg~---~vv~HD~~l 50 (220)
T cd08579 11 GVENTLEALEAAIKAKPDYVEIDVQETKDGQ---FVVMHDANL 50 (220)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEeeEcCCCC---EEEEcCCch
Confidence 3567899999999999999999999999998 899999886
No 43
>cd08563 GDPD_TtGDE_like Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermoanaerobacter tengcongensis glycerophosphodiester phosphodiesterase (TtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Despite the fact that most of GDPD family members exist as the monomer, TtGDE can function as a dimeric unit. Its catalytic mechanism is based on the general base-acid catalysis, which is similar to that of phosphoinositide-specific phospholipases C (PI-PLCs, EC 3.1.4.11). A divalent metal cation is required for the enzyme activity of TtGDE.
Probab=93.69 E-value=0.064 Score=45.09 Aligned_cols=40 Identities=10% Similarity=0.040 Sum_probs=36.3
Q ss_pred cCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccc
Q psy9839 120 KGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAV 162 (197)
Q Consensus 120 ~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ 162 (197)
..+.|.++|..|+..||+.+|+|++--.+|. ++|.|-.++
T Consensus 13 ~pENT~~Af~~A~~~g~~~vE~DV~~TkDg~---~Vv~HD~~l 52 (230)
T cd08563 13 APENTLLAFKKAIEAGADGIELDVHLTKDGQ---LVVIHDETV 52 (230)
T ss_pred CCchhHHHHHHHHHcCCCEEEEEeeEcCCCC---EEEECCCCc
Confidence 3567899999999999999999999999997 899998877
No 44
>PRK11143 glpQ glycerophosphodiester phosphodiesterase; Provisional
Probab=93.07 E-value=0.13 Score=47.28 Aligned_cols=51 Identities=8% Similarity=-0.050 Sum_probs=42.0
Q ss_pred CCcceeeccc----ccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccc
Q psy9839 109 SHNTYLTGHQ----LKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAV 162 (197)
Q Consensus 109 SHNTYL~G~Q----l~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ 162 (197)
++.+.+.|+. +.-+.+.++|..|+..|+.-+|+|+|--.+|. |+|.|-.++
T Consensus 24 ~~~pliiAHRGas~~~PENTl~Af~~A~~~GaD~IE~DV~lTkDg~---lVv~HD~~l 78 (355)
T PRK11143 24 SAEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDQ---LVVLHDHYL 78 (355)
T ss_pred CCCcEEEECCCCCCCCCcchHHHHHHHHHcCCCEEEEeeeEccCCc---EEEeCCchh
Confidence 3345555554 33568899999999999999999999999998 999999877
No 45
>cd08567 GDPD_SpGDE_like Glycerophosphodiester phosphodiesterase domain of putative Silicibacter pomeroyi glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and similar proteins. The prototype of this CD is a putative GP-GDE from Silicibacter pomeroyi (SpGDE). It shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=92.92 E-value=0.1 Score=44.25 Aligned_cols=40 Identities=5% Similarity=-0.036 Sum_probs=36.7
Q ss_pred CCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeeccccc
Q psy9839 121 GESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVM 163 (197)
Q Consensus 121 g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~t 163 (197)
-+-+.++|..|+..|+..+|+|++--.+|. ++|.|-.++.
T Consensus 14 pENT~~Af~~A~~~Gad~vE~DV~~TkDg~---~Vv~HD~~l~ 53 (263)
T cd08567 14 PENTLPAFAKALDLGVDTLELDLVLTKDGV---IVVSHDPKLN 53 (263)
T ss_pred CcchHHHHHHHHHcCCCEEEEEEEEcCCCC---EEEeCCCccC
Confidence 467899999999999999999999999998 8999999873
No 46
>cd08582 GDPD_like_2 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=92.77 E-value=0.1 Score=43.94 Aligned_cols=40 Identities=8% Similarity=-0.048 Sum_probs=36.6
Q ss_pred cCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccc
Q psy9839 120 KGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAV 162 (197)
Q Consensus 120 ~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ 162 (197)
.-+-+.++|..|+..|++.+|+|++--.+|. |+|.|-.++
T Consensus 11 ~pENTl~af~~A~~~G~~~vE~Dv~lTkDg~---~Vv~HD~~l 50 (233)
T cd08582 11 APENTLAAFELAWEQGADGIETDVRLTKDGE---LVCVHDPTL 50 (233)
T ss_pred CCchHHHHHHHHHHcCCCEEEEEEEEccCCC---EEEecCCcc
Confidence 3577899999999999999999999989997 899999888
No 47
>cd08562 GDPD_EcUgpQ_like Glycerophosphodiester phosphodiesterase domain in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase UgpQ and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), UgpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two distinct GP-GDEs. UgpQ gene from the E. coli ugp operon codes for a cytosolic phosphodiesterase GlpQ, which is the prototype of this family. Various glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG)
Probab=92.74 E-value=0.11 Score=43.17 Aligned_cols=40 Identities=5% Similarity=-0.012 Sum_probs=36.2
Q ss_pred cCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccc
Q psy9839 120 KGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAV 162 (197)
Q Consensus 120 ~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ 162 (197)
.-+-|.+++..|+..|++.+|+|++--.+|. ++|.|-.++
T Consensus 11 ~pENT~~af~~A~~~gad~iE~Dv~~TkDg~---lvv~HD~~l 50 (229)
T cd08562 11 APENTLAAFRAAAELGVRWVEFDVKLSGDGT---LVLIHDDTL 50 (229)
T ss_pred CCchHHHHHHHHHHcCCCEEEEEEeECCCCC---EEEEcCCCC
Confidence 3567899999999999999999999999998 899998876
No 48
>cd08561 GDPD_cytoplasmic_ScUgpQ2_like Glycerophosphodiester phosphodiesterase domain of Streptomyces coelicolor cytoplasmic phosphodiesterases UgpQ2 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized cytoplasmic phosphodiesterases which predominantly exist in bacteria. The prototype of this family is a putative cytoplasmic phosphodiesterase encoded by gene ulpQ2 (SCO1419) in the Streptomyces coelicolor genome. It is distantly related to the Escherichia coli cytoplasmic phosphodiesterases UgpQ that catalyzes the hydrolysis of glycerophosphodiesters at the inner side of the cytoplasmic membrane to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=92.58 E-value=0.12 Score=44.03 Aligned_cols=40 Identities=5% Similarity=-0.044 Sum_probs=36.3
Q ss_pred cCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccc
Q psy9839 120 KGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAV 162 (197)
Q Consensus 120 ~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ 162 (197)
.-+-+.++|.+|+..|++.+|+|++--.+|. ++|.|-.++
T Consensus 11 ~pENT~~af~~A~~~g~d~vE~Dv~~TkDg~---~Vv~HD~~l 50 (249)
T cd08561 11 APENTLLAFEDAVELGADVLETDVHATKDGV---LVVIHDETL 50 (249)
T ss_pred CCccHHHHHHHHHHhCCCEEEEEeeECCCCC---EEEECCCcc
Confidence 3567899999999999999999999888897 899998887
No 49
>cd08575 GDPD_GDE4_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function is not elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests mammalian GDE4 may play some distinct role from other members of mammalian GDEs family. Also included in this subfamily are uncharacterized mammalian glycerophosphodiester phosphodiesterase domain-containing protein 3 (GDPD3) and similar proteins which display very high sequence homology to mammalian GDE4.
Probab=92.48 E-value=0.14 Score=44.39 Aligned_cols=39 Identities=5% Similarity=0.118 Sum_probs=36.2
Q ss_pred CCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccc
Q psy9839 121 GESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAV 162 (197)
Q Consensus 121 g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ 162 (197)
-+-|.+++..|+..|++.+|+|++--.+|. |+|.|-.++
T Consensus 14 pENTl~af~~A~~~G~d~iE~DV~lT~Dg~---~Vv~HD~~l 52 (264)
T cd08575 14 PENTIAAFRHAVKNGADMLELDVQLTKDGQ---VVVFHDWDL 52 (264)
T ss_pred CccHHHHHHHHHHcCCCEEEEEEEECCCCC---EEEEcCCcc
Confidence 467899999999999999999999999998 899999887
No 50
>cd08574 GDPD_GDE_2_3_6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2, GDE3, GDE6-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase domain-containing protein subtype 5 (GDE2), subtype 2 (GDE3), subtype 1 (GDE6), and their eukaryotic homologs. Mammalian GDE2, GDE3, and GDE6 show very high sequence similarity to each other and have been classified into the same family. Although they are all transmembrane proteins, based on different pattern of tissue distribution, these enzymes might display diverse cellular functions. Mammalian GDE2 is primarily expressed in mature neurons. It selectively hydrolyzes glycerophosphocholine (GPC) and mainly functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differentiation in the spinal cord. Mammalian GDE3 is specifically expressed in bo
Probab=92.07 E-value=0.15 Score=44.10 Aligned_cols=39 Identities=8% Similarity=0.001 Sum_probs=36.2
Q ss_pred CCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccc
Q psy9839 121 GESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAV 162 (197)
Q Consensus 121 g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ 162 (197)
-+-+..+|..|+..|+..+|+||+--.+|. |+|.|=.++
T Consensus 15 PENTl~Af~~A~~~Gad~iE~DV~lTkDg~---lVV~HD~~l 53 (252)
T cd08574 15 PENTLMSFEKALEHGVYGLETDVTISYDGV---PFLMHDRTL 53 (252)
T ss_pred CccHHHHHHHHHHcCCCEEEEEEeEccCCc---EEEeCCCcc
Confidence 467899999999999999999999999998 899999887
No 51
>cd08600 GDPD_EcGlpQ_like Glycerophosphodiester phosphodiesterase domain of Escherichia coli (GlpQ) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli periplasmic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), GlpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the E. coli glp operon codes for a periplasmic phosphodiesterase GlpQ, which is the prototype of this family. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GP
Probab=91.97 E-value=0.15 Score=45.83 Aligned_cols=41 Identities=5% Similarity=-0.125 Sum_probs=37.3
Q ss_pred ccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccc
Q psy9839 119 LKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAV 162 (197)
Q Consensus 119 l~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ 162 (197)
+.-+.+.++|..|+..|+..+|+||+--.+|. |+|.|-.++
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~---lVv~HD~~l 52 (318)
T cd08600 12 YLPEHTLEAKALAYAQGADYLEQDVVLTKDDK---LVVIHDHYL 52 (318)
T ss_pred CCCccHHHHHHHHHHcCCCEEEeeeeECcCCc---EEEeCCchh
Confidence 34578899999999999999999999999998 899999887
No 52
>cd08607 GDPD_GDE5 Glycerophosphodiester phosphodiesterase domain of putative mammalian glycerophosphodiester phosphodiesterase GDE5 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative mammalian GDE5 and similar proteins. Mammalian GDE5 is widely expressed in mammalian tissues, with highest expression in the spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. In addition to C-terminal GDPD domain, all members in this subfamily have a starch binding domain (CBM20) in the N-terminus, which suggests these proteins may play a distinct role in glycerol metabolism.
Probab=91.89 E-value=0.18 Score=43.98 Aligned_cols=48 Identities=8% Similarity=0.126 Sum_probs=40.4
Q ss_pred eeecccccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeeccccc
Q psy9839 113 YLTGHQLKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVM 163 (197)
Q Consensus 113 YL~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~t 163 (197)
|+.+.-..-+-+..+|..|+..|+..+|+|++--.+|. |+|+|=.++.
T Consensus 12 ~~~~~~~~PENTl~af~~A~~~Gad~iE~DV~lTkDg~---~VV~HD~~l~ 59 (290)
T cd08607 12 YTAASAVVRENTIASFLQAAEHGADMVEFDVQLTKDLV---PVVYHDFTLR 59 (290)
T ss_pred cccccCCCCccHHHHHHHHHHcCCCEEEEEEEEccCCe---EEEEcCCeeE
Confidence 44433445678899999999999999999999999998 9999988874
No 53
>cd08601 GDPD_SaGlpQ_like Glycerophosphodiester phosphodiesterase domain of Staphylococcus aureus and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) from Staphylococcus aureus, Bacillus subtilis and similar proteins. Members in this family show very high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=91.71 E-value=0.18 Score=43.21 Aligned_cols=39 Identities=8% Similarity=-0.061 Sum_probs=36.3
Q ss_pred CCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccc
Q psy9839 121 GESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAV 162 (197)
Q Consensus 121 g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ 162 (197)
-+-+.+++..|+..||..+|+|+|--.+|. |+|.|-.++
T Consensus 14 pENT~~af~~A~~~G~d~vE~DV~lTkDg~---~Vv~HD~~l 52 (256)
T cd08601 14 PEHTFAAYDLAREMGADYIELDLQMTKDGV---LVAMHDETL 52 (256)
T ss_pred CCchHHHHHHHHHcCCCEEEEEeeECCCCe---EEEeCCCcc
Confidence 578899999999999999999999999998 899998887
No 54
>cd08581 GDPD_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=90.98 E-value=0.22 Score=42.39 Aligned_cols=39 Identities=5% Similarity=0.140 Sum_probs=35.7
Q ss_pred CCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccc
Q psy9839 121 GESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAV 162 (197)
Q Consensus 121 g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ 162 (197)
-+-+..+|..|+..|+..+|+|++--.+|. |+|.|-.++
T Consensus 12 PENTl~Af~~A~~~gad~iE~DV~lTkDg~---~Vv~HD~~l 50 (229)
T cd08581 12 PENTLVGFRAAVDAGARFVEFDVQLSADGV---PVVFHDDTL 50 (229)
T ss_pred CccHHHHHHHHHHcCCCEEEEeeeECCCCc---EEEECCCcc
Confidence 467889999999999999999999999998 899998877
No 55
>cd08571 GDPD_SHV3_plant Glycerophosphodiester phosphodiesterase domain of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase (GDPD) domain present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP-GDEs are not conserv
Probab=90.97 E-value=0.2 Score=44.72 Aligned_cols=39 Identities=15% Similarity=0.066 Sum_probs=36.3
Q ss_pred CCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccc
Q psy9839 121 GESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAV 162 (197)
Q Consensus 121 g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ 162 (197)
-+-+..+|..|+..|+..||+|++--.+|. ++|.|-.++
T Consensus 14 PENTl~Af~~A~~~Gad~IE~DV~lTkDg~---lVv~HD~~l 52 (302)
T cd08571 14 PDSTDLAYQKAISDGADVLDCDVQLTKDGV---PICLPSINL 52 (302)
T ss_pred CcchHHHHHHHHHcCCCEEEeeeeEcCCCc---EEEeCCchh
Confidence 467899999999999999999999999998 899999888
No 56
>cd08577 PI-PLCc_GDPD_SF_unchar3 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=90.86 E-value=0.19 Score=43.53 Aligned_cols=61 Identities=16% Similarity=0.082 Sum_probs=42.0
Q ss_pred cCCcceeecccccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccccchhhHHHHHHhhhcChhHHHhH
Q psy9839 108 SSHNTYLTGHQLKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMDRIASFHLHYHQREHDTNPVRETM 187 (197)
Q Consensus 108 SSHNTYL~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts~I~~~~v~~~Ik~~Af~~v~~~~ 187 (197)
-|||-|.--.-| ..||..||..||+|||-- +|+ -+|-|...+++. -.++++-=++|+.-.+
T Consensus 4 hsHNDY~r~~Pl---------~~Al~~g~~svEaDV~l~-dg~---l~V~Hd~~~l~~------~~tl~~Lyl~pL~~~l 64 (228)
T cd08577 4 HSHNDYWRKRPL---------YDALSAGFGSIEADVWLV-NGD---LLVAHDEVDLSP------ARTLESLYLDPLLEIL 64 (228)
T ss_pred ccccccccccch---------HHHHHcCCCEEEEeEEEE-CCE---EEEEcChhHcCc------cCCHHHHhHHHHHHHH
Confidence 489999865443 569999999999999984 676 488887766544 3344444345555433
No 57
>cd08565 GDPD_pAtGDE_like Glycerophosphodiester phosphodiesterase domain of putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (pAtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=90.82 E-value=0.22 Score=42.54 Aligned_cols=39 Identities=5% Similarity=0.052 Sum_probs=35.5
Q ss_pred CCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccc
Q psy9839 121 GESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAV 162 (197)
Q Consensus 121 g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ 162 (197)
-+-+..++.+|+..|+..+|+|+|--.+|. |+|.|-.++
T Consensus 12 pENTl~af~~A~~~G~d~iE~DV~~TkDg~---~Vv~HD~~l 50 (235)
T cd08565 12 PENTLEGFRKALELGVDAVEFDVHLTADGE---VVVIHDPTL 50 (235)
T ss_pred CccHHHHHHHHHHcCCCEEEEeEEEccCCC---EEEECCChh
Confidence 467889999999999999999999888887 899998877
No 58
>cd08564 GDPD_GsGDE_like Glycerophosphodiester phosphodiesterase domain of putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase (GsGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=90.79 E-value=0.24 Score=42.79 Aligned_cols=39 Identities=3% Similarity=-0.098 Sum_probs=35.0
Q ss_pred cCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeeccc
Q psy9839 120 KGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHA 161 (197)
Q Consensus 120 ~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t 161 (197)
.-+-+.++|..|+..|+..+|+|+|--.+|. ++|+|-.+
T Consensus 18 ~pENTl~Af~~A~~~Gad~iE~DV~lTkDg~---lVv~HD~~ 56 (265)
T cd08564 18 YPENTLPSFRRALEIGVDGVELDVFLTKDNE---IVVFHGTE 56 (265)
T ss_pred CCchhHHHHHHHHHcCCCEEEEeeEECCCCC---EEEEcCCc
Confidence 4567899999999999999999999989998 89999854
No 59
>cd08566 GDPD_AtGDE_like Glycerophosphodiester phosphodiesterase domain of Agrobacterium tumefaciens and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (AtGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homolgoues. Members in this family shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. AtGDE exists as a hexamer that is a trimer of dimers, which is unique among current known GDPD family members. However, it remains unclear if the hexamer plays a physiological role in AtGDE enzymatic function.
Probab=90.71 E-value=0.26 Score=42.25 Aligned_cols=39 Identities=13% Similarity=-0.017 Sum_probs=35.9
Q ss_pred CCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccc
Q psy9839 121 GESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAV 162 (197)
Q Consensus 121 g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ 162 (197)
-+-+.++|..|+..|++.+|+|++--.+|. |+|.|=.++
T Consensus 14 pENTl~af~~A~~~g~d~iE~DV~~T~Dg~---~vv~HD~~l 52 (240)
T cd08566 14 PENSLAAIEAAIDLGADIVEIDVRRTKDGV---LVLMHDDTL 52 (240)
T ss_pred CccHHHHHHHHHHcCCCEEEEEeeEcCCCC---EEEECCCCC
Confidence 367899999999999999999999999998 899998877
No 60
>cd08568 GDPD_TmGDE_like Glycerophosphodiester phosphodiesterase domain of Thermotoga maritime and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermotoga maritime glycerophosphodiester phosphodiesterase (TmGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. TmGDE exists as a monomer that might be the biologically relevant form.
Probab=90.68 E-value=0.3 Score=41.05 Aligned_cols=40 Identities=8% Similarity=0.031 Sum_probs=36.2
Q ss_pred cCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccc
Q psy9839 120 KGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAV 162 (197)
Q Consensus 120 ~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ 162 (197)
.-+-+.+++..|+..|++.+|+|++--.+|. |+|.|=.++
T Consensus 12 ~pENTl~af~~A~~~Gad~iE~DV~lT~Dg~---~Vv~HD~~l 51 (226)
T cd08568 12 YPENTLEAFKKAIEYGADGVELDVWLTKDGK---LVVLHDENL 51 (226)
T ss_pred CCcchHHHHHHHHHcCcCEEEEEEEEcCCCC---EEEECCCcc
Confidence 4577899999999999999999999989998 899998776
No 61
>cd08612 GDPD_GDE4 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function has not yet been elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests GDE4 may play some distinct role from other members of the GDE family.
Probab=90.58 E-value=0.26 Score=43.60 Aligned_cols=39 Identities=5% Similarity=0.016 Sum_probs=35.9
Q ss_pred CCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccc
Q psy9839 121 GESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAV 162 (197)
Q Consensus 121 g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ 162 (197)
-+-+.+++..|+..|++.+|+|+|--.+|. |+|.|=.++
T Consensus 40 PENTl~Af~~A~~~Gad~iE~DV~lTkDG~---lVV~HD~~l 78 (300)
T cd08612 40 LENTMEAFEHAVKVGTDMLELDVHLTKDGQ---VVVSHDENL 78 (300)
T ss_pred CccHHHHHHHHHHcCCCEEEEEeeECcCCe---EEEECCccc
Confidence 467899999999999999999999999998 999998887
No 62
>cd08559 GDPD_periplasmic_GlpQ_like Periplasmic glycerophosphodiester phosphodiesterase domain (GlpQ) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in bacterial and eukaryotic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ. GP-GDEs are involved in glycerol metabolism and catalyze the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. In E. coli, there are two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the glp operon codes for a periplasmic phosphodiesterase GlpQ. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG), glycerophosphoinositol (GPI),
Probab=90.55 E-value=0.25 Score=43.65 Aligned_cols=40 Identities=10% Similarity=-0.060 Sum_probs=36.4
Q ss_pred cCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccc
Q psy9839 120 KGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAV 162 (197)
Q Consensus 120 ~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ 162 (197)
.-+.+..+|..|+..|+..+|+|++--.+|. ++|.|-.++
T Consensus 13 ~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~---lVv~HD~~l 52 (296)
T cd08559 13 APEHTLAAYALAIEMGADYIEQDLVMTKDGV---LVARHDPTL 52 (296)
T ss_pred CccchHHHHHHHHHhCCCEEEEeeEEccCCC---EEEeccchh
Confidence 3467899999999999999999999999998 899998777
No 63
>cd08573 GDPD_GDE1 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE1 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE1 (also known as MIR16, membrane interacting protein of RGS16) and their metazoan homologs. GDE1 is widely expressed in mammalian tissues, including the heart, brain, liver, and kidney. It shows sequence homology to bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. GDE1 has been characterized as GPI-GDE (EC 3.1.4.44) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate glycerol phosphate and inositol. It functions as an integral membrane-bound glycoprotein interacting with regulator of G protein signaling protein RGS16, and is modulated by G
Probab=90.29 E-value=0.29 Score=42.54 Aligned_cols=40 Identities=10% Similarity=0.127 Sum_probs=35.7
Q ss_pred cCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccc
Q psy9839 120 KGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAV 162 (197)
Q Consensus 120 ~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ 162 (197)
.-+-+..+|..|+..|+..+|+|+|--.+|. ++|.|-.++
T Consensus 11 ~pENTl~af~~A~~~Gad~iE~DV~lTkDg~---~Vv~HD~~l 50 (258)
T cd08573 11 APENTLAAFRQAKKNGADGVEFDLEFTKDGV---PVLMHDDTV 50 (258)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEeeECCCCc---EEEECCCCc
Confidence 3567899999999999999999999999998 899998766
No 64
>cd08570 GDPD_YPL206cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL206cp and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL206cp and uncharacterized hypothetical homologs existing in fungi. The product of S. cerevisiae ORF YPL206c (PGC1), YPL206cp (Pgc1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL206cp is an integral membrane protein with a single GDPD domain following by a short hydrophobic C-terminal tail that may function as a membrane anchor. This protein plays an essential role in the regulation of the cardiolipin (CL) biosynthetic pathway in yeast by removing the excess phosphatidylglycerol (PG) content of membranes via a phospholip
Probab=89.98 E-value=0.37 Score=40.74 Aligned_cols=40 Identities=8% Similarity=0.012 Sum_probs=36.0
Q ss_pred cCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccc
Q psy9839 120 KGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAV 162 (197)
Q Consensus 120 ~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ 162 (197)
.-+.+.++|..|+..|++.+|+|++--.+|. ++|.|-.++
T Consensus 11 ~pENT~~af~~a~~~g~d~vE~Dv~lTkDg~---~vv~HD~~l 50 (234)
T cd08570 11 YPENTLLAFEKAVEAGADAIETDVHLTKDGV---VVISHDPNL 50 (234)
T ss_pred CCccHHHHHHHHHHhCCCEEEEEeeEccCCc---EEEeCCCcc
Confidence 3577899999999999999999999988997 899998777
No 65
>cd08580 GDPD_Rv2277c_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial protein Rv2277c and similar proteins. Members in this subfamily are bacterial homologous of mammalian GDE4, a transmembrane protein whose cellular function has not yet been elucidated.
Probab=89.88 E-value=0.35 Score=42.61 Aligned_cols=40 Identities=10% Similarity=0.179 Sum_probs=36.0
Q ss_pred cCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccc
Q psy9839 120 KGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAV 162 (197)
Q Consensus 120 ~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ 162 (197)
.-+-+..+|..|+..|+..+|+|++--.+|. ++|.|=.++
T Consensus 13 ~PENTl~Af~~A~~~G~d~iE~DV~lTkDg~---lVv~HD~~l 52 (263)
T cd08580 13 APENTLLAISKALANGADAIWLTVQLSKDGV---PVLYRPSDL 52 (263)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEeEECCCCC---EEEeCCCch
Confidence 4567889999999999999999999988897 899998877
No 66
>cd08608 GDPD_GDE2 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE2 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 5 (GDPD5)) and their metazoan homologs. Mammalian GDE2 is transmembrane protein primarily expressed in mature neurons. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE2 selectively hydrolyzes glycerophosphocholine (GPC) and has been characterized as GPC-GDE (EC 3.1.4.2) that contributes to osmotic regulation of cellular GPC. Mammalian GDE2 functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differenti
Probab=89.87 E-value=0.19 Score=46.38 Aligned_cols=41 Identities=7% Similarity=0.015 Sum_probs=36.9
Q ss_pred CCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccc
Q psy9839 121 GESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMD 164 (197)
Q Consensus 121 g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts 164 (197)
-+-+..++..|+..|+.-+|+|++--.+|. |+|.|=.++..
T Consensus 15 PENTL~AF~~A~~~GaD~IElDV~lTkDGv---lVV~HD~tL~R 55 (351)
T cd08608 15 PENTLMSFQKALEQKVYGLQADVTISLDGV---PFLMHDRTLRR 55 (351)
T ss_pred CcchHHHHHHHHHcCCCEEEEEeeEccCCc---EEEECCCcccc
Confidence 467889999999999999999999999998 99999988833
No 67
>cd08606 GDPD_YPL110cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL110cp and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL110cp and other uncharacterized fungal homologs. The product of S. cerevisiae ORF YPL110c (GDE1), YPL110cp (Gde1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL110cp has been characterized as a cytoplasmic glycerophosphocholine (GPC)-specific phosphodiesterase that selectively hydrolyzes GPC, not glycerophosphoinositol (GPI), to generate choline and glycerolphosphate. YPL110cp has multi-domain architecture, including not only C-terminal GDPD, but also an SPX N-terminal domain along with several ankyrin repeats, which imp
Probab=89.85 E-value=0.29 Score=42.59 Aligned_cols=39 Identities=15% Similarity=0.027 Sum_probs=36.0
Q ss_pred CCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeeccccc
Q psy9839 122 ESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVM 163 (197)
Q Consensus 122 ~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~t 163 (197)
+-+..++..|+..|++.+|+|++--.+|. |+|.|-.++.
T Consensus 24 ENTl~af~~A~~~g~d~vE~DV~lTkDg~---~VV~HD~~l~ 62 (286)
T cd08606 24 ENTVESFILAASLGASYVEVDVQLTKDLV---PVIYHDFLVS 62 (286)
T ss_pred cchHHHHHHHHHcCCCEEEEEEEEccCCE---EEEeCCCeec
Confidence 77899999999999999999999999998 9999988774
No 68
>PRK09454 ugpQ cytoplasmic glycerophosphodiester phosphodiesterase; Provisional
Probab=89.73 E-value=0.32 Score=41.76 Aligned_cols=40 Identities=5% Similarity=-0.041 Sum_probs=36.1
Q ss_pred cCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccc
Q psy9839 120 KGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAV 162 (197)
Q Consensus 120 ~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ 162 (197)
.-+-+.+++..|+..|+..+|+||+--.+|. |+|.|=.++
T Consensus 20 ~pENT~~Af~~A~~~G~d~vE~DV~lT~Dg~---lVV~HD~~l 59 (249)
T PRK09454 20 APENTLAAIDVGARYGHRMIEFDAKLSADGE---IFLLHDDTL 59 (249)
T ss_pred CChHHHHHHHHHHHcCCCEEEEEeeECCCCC---EEEECCCcc
Confidence 3467899999999999999999999999998 899998777
No 69
>cd08609 GDPD_GDE3 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE3 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE3 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 2 (GDPD2), Osteoblast differentiation promoting factor) and their metazoan homologs. Mammalian GDE3 is a transmembrane protein specifically expressed in bone tissues and spleen. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE3 has been characterized as glycerophosphoinositol inositolphosphodiesterase (EC 3.1.4.43) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate inositol 1-phosphate (Ins1P) and glycerol. Mammalia
Probab=89.72 E-value=0.33 Score=43.99 Aligned_cols=39 Identities=5% Similarity=-0.090 Sum_probs=36.5
Q ss_pred CCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccc
Q psy9839 121 GESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAV 162 (197)
Q Consensus 121 g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ 162 (197)
-+.+..++..|+..|+..+|+|++--.+|. |+|.|=.++
T Consensus 40 PENTl~AF~~Ai~~GaD~IE~DV~lTkDG~---lVV~HD~tL 78 (315)
T cd08609 40 PENTLMSLRKSLECGVVVFETDVMVSKDGV---PFLMHDEGL 78 (315)
T ss_pred CccHHHHHHHHHHcCCCEEEEEEEECCCCC---EEEeCCCcc
Confidence 578899999999999999999999999998 899999887
No 70
>cd08605 GDPD_GDE5_like_1_plant Glycerophosphodiester phosphodiesterase domain of uncharacterized plant glycerophosphodiester phosphodiesterase-like proteins similar to mammalian GDE5. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized plant glycerophosphodiester phosphodiesterase (GP-PDE)-like proteins. Members in this family show very high sequence homology to mammalian glycerophosphodiester phosphodiesterase GDE5 and are distantly related to plant GP-PDEs.
Probab=89.71 E-value=0.33 Score=42.26 Aligned_cols=38 Identities=8% Similarity=0.089 Sum_probs=35.5
Q ss_pred CCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccc
Q psy9839 122 ESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAV 162 (197)
Q Consensus 122 ~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ 162 (197)
+-+..++..|+..|+..+|+|+|--.+|. |+|+|=.++
T Consensus 25 ENTl~Af~~A~~~Gad~vE~DV~lTkDg~---~VV~HD~~l 62 (282)
T cd08605 25 ENTIASFIAASKFGADFVEFDVQVTRDGV---PVIWHDDFI 62 (282)
T ss_pred CcHHHHHHHHHHcCCCEEEEEEEECcCCe---EEEECCCce
Confidence 56789999999999999999999999998 999999888
No 71
>cd08602 GDPD_ScGlpQ1_like Glycerophosphodiester phosphodiesterase domain of Streptomycin coelicolor (GlpQ1) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of putative bacterial and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ, as well as plant glycerophosphodiester phosphodiesterases (GP-PDEs), all of which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. The prototypes of this family include putative secreted phosphodiesterase encoded by gene glpQ1 (SCO1565) from the pho regulon in Streptomyces coelicolor genome, and in plants, two distinct Arabidopsis thaliana genes, AT5G08030 and AT1G74210, coding putative GP-PDEs from the cell walls and vacuoles, respectively.
Probab=89.43 E-value=0.34 Score=43.49 Aligned_cols=41 Identities=10% Similarity=-0.076 Sum_probs=37.3
Q ss_pred ccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccc
Q psy9839 119 LKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAV 162 (197)
Q Consensus 119 l~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ 162 (197)
+.-+.+.++|..|+..|+..+|+|++--.+|. ++|.|-.++
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DVqlTkDg~---lVv~HD~~l 52 (309)
T cd08602 12 YRPEHTLAAYQLAIEQGADFIEPDLVSTKDGV---LICRHEPEL 52 (309)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEeeeECCCCc---EEEeCCCcc
Confidence 34578899999999999999999999999998 899999887
No 72
>cd08583 PI-PLCc_GDPD_SF_unchar1 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=89.10 E-value=0.51 Score=39.98 Aligned_cols=39 Identities=8% Similarity=-0.087 Sum_probs=35.2
Q ss_pred CCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccc
Q psy9839 121 GESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAV 162 (197)
Q Consensus 121 g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ 162 (197)
-+-+..++..|+..|++-+|+|++--.+|. ++|.|-.++
T Consensus 14 pENTl~Af~~A~~~G~d~iE~DV~lTkDg~---lVv~HD~~~ 52 (237)
T cd08583 14 YTNSLDAFEHNYKKGYRVFEVDLSLTSDGV---LVARHSWDE 52 (237)
T ss_pred CccHHHHHHHHHHhCCCEEEEEeeEccCCC---EEEEECCcC
Confidence 467899999999999999999999999998 899997655
No 73
>cd08604 GDPD_SHV3_repeat_2 Glycerophosphodiester phosphodiesterase domain repeat 2 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 2 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play important an role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP
Probab=88.23 E-value=0.56 Score=41.85 Aligned_cols=41 Identities=7% Similarity=-0.031 Sum_probs=36.9
Q ss_pred ccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccc
Q psy9839 119 LKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAV 162 (197)
Q Consensus 119 l~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ 162 (197)
+.-+.+..+|..|+..|+.-+|+|++--.+|. ++|.|=.++
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkDG~---lVv~HD~~l 52 (300)
T cd08604 12 DYPGCTDLAYQKAVKDGADVIDCSVQMSKDGV---PFCLDSINL 52 (300)
T ss_pred CCCcchHHHHHHHHHcCCCEEEEeeeEcCCCC---EEEeccccc
Confidence 34578999999999999999999999999998 899997776
No 74
>cd08572 GDPD_GDE5_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins. GDE5 is widely expressed in mammalian tissues, with highest expression in spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=87.94 E-value=0.52 Score=41.77 Aligned_cols=42 Identities=10% Similarity=0.130 Sum_probs=37.5
Q ss_pred cCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccc
Q psy9839 120 KGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMD 164 (197)
Q Consensus 120 ~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts 164 (197)
.-+.+..+|..|+..|+.-+|+||+--.+|. |+|+|=.++..
T Consensus 20 ~pENTl~Af~~A~~~Gad~vE~DV~lTkDG~---lVv~HD~~l~r 61 (293)
T cd08572 20 IRENTIASFLAAAKHGADMVEFDVQLTKDGV---PVIYHDFTISV 61 (293)
T ss_pred cCcccHHHHHHHHHcCCCEEEEEEEEccCCe---EEEEcCCccee
Confidence 4577899999999999999999999999998 99999888733
No 75
>cd08560 GDPD_EcGlpQ_like_1 Glycerophosphodiester phosphodiesterase domain similar to Escherichia coli periplasmic phosphodiesterase (GlpQ) include uncharacterized proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and their hypothetical homologs. Members in this subfamily show high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=86.81 E-value=0.61 Score=43.07 Aligned_cols=37 Identities=8% Similarity=-0.137 Sum_probs=34.3
Q ss_pred CCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecc
Q psy9839 121 GESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTH 160 (197)
Q Consensus 121 g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~ 160 (197)
-+-+.++|..|+..|+.-||+|++--.+|. |||.|-.
T Consensus 30 PEnTl~Af~~Ai~~Gad~IE~DV~lTkDg~---lVV~HD~ 66 (356)
T cd08560 30 PEHTRESYEAAARMGAGILECDVTFTKDRE---LVCRHSQ 66 (356)
T ss_pred CcchHHHHHHHHHcCCCEEEEEeeEccCCc---EEEECCC
Confidence 467899999999999999999999999998 8999985
No 76
>cd08584 PI-PLCc_GDPD_SF_unchar2 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=86.04 E-value=0.84 Score=39.05 Aligned_cols=49 Identities=10% Similarity=-0.134 Sum_probs=43.3
Q ss_pred cHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccccchhhHHHHHHhhh
Q psy9839 124 SVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMDRIASFHLHYHQREH 178 (197)
Q Consensus 124 S~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts~I~~~~v~~~Ik~~ 178 (197)
+..++.+|+.. .-+|+|+|.- +|. ++|.|=.++..-..+.+|++.+++.
T Consensus 8 Tl~AF~~A~~~--dgvE~DVr~t-Dg~---lVV~HD~~l~~~PtLeEvL~~~~~~ 56 (192)
T cd08584 8 TITALKRTFEN--FGVETDIRDY-GGQ---LVISHDPFVKNGELLEDWLKEYNHG 56 (192)
T ss_pred HHHHHHHHHHC--CEEEEEEEee-CCe---EEEECCCCCCCCCCHHHHHHhcccc
Confidence 57899999998 8899999987 887 8999999998888899999988654
No 77
>cd08587 PI-PLCXDc_like Catalytic domain of phosphatidylinositol-specific phospholipase C X domain containing and similar proteins. This family corresponds to the catalytic domain present in phosphatidylinositol-specific phospholipase C X domain containing proteins (PI-PLCXD) which are bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) sequence homologs mainly found in eukaryota. The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs and their bacterial homologs contain a single TIM-barrel type catalytic domain, X domain, which is more closely related to that of bacterial PI-PLCs. Although the biological function of eukaryotic PI-PLCXDs still remains unclear, it may be
Probab=86.02 E-value=1.1 Score=39.50 Aligned_cols=79 Identities=8% Similarity=-0.082 Sum_probs=50.1
Q ss_pred CCCccchhcccCCccee--eccccc-------------------CCCcHHHHHHHHHhcCCCcceeeeeCCCCCccccee
Q psy9839 98 EMPLSHYFIASSHNTYL--TGHQLK-------------------GESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKI 156 (197)
Q Consensus 98 ~~PLshYFIsSSHNTYL--~G~Ql~-------------------g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i 156 (197)
+.||.+..|-.|||+.- +..... +..-......=|..|+|-.+|.+..-+.+... -.+
T Consensus 6 ~~~l~~l~iPGtHds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiR~fDlR~~~~~~~~~~-~~~ 84 (288)
T cd08587 6 DLPLRDLVIPGSHDSGMYTINGDSPVGPDQPEFGKIAKGIVRKWSVTQSLSIYDQLEAGIRYFDLRVAYKPDSENK-LYF 84 (288)
T ss_pred hCchhheecccccccceeEcCCCCCCCCcchhhhhhHHHHHHHHhhccCcCHHHHHhhCceEEEEEEeecCCCCCe-EEE
Confidence 57999999999999543 322210 12222233456778999999988554421111 367
Q ss_pred eecccccccchhhHHHHHHhhhc
Q psy9839 157 YKTHAVMDRIASFHLHYHQREHD 179 (197)
Q Consensus 157 ~hg~t~ts~I~~~~v~~~Ik~~A 179 (197)
+||-. .-..+.++++.|+++.
T Consensus 85 ~H~~~--~~~~~~~~l~~i~~fl 105 (288)
T cd08587 85 VHGLY--SGEPVDEVLEDVNDFL 105 (288)
T ss_pred Eeecc--cccCHHHHHHHHHHHH
Confidence 78732 2378889999998863
No 78
>cd08610 GDPD_GDE6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE6 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE6 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 4 (GDPD4)) and their metazoan homologs. Mammalian GDE6 is a transmembrane protein predominantly expressed in the spermatocytes of testis. Although the specific physiological function of mammalian GDE6 has not been elucidated, its different pattern of tissue distribution suggests it might play a critical role in the completion of meiosis during male germ cell differentiation.
Probab=85.94 E-value=0.8 Score=41.56 Aligned_cols=40 Identities=8% Similarity=0.019 Sum_probs=36.8
Q ss_pred CCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeeccccc
Q psy9839 121 GESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVM 163 (197)
Q Consensus 121 g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~t 163 (197)
-+-+..+|..|+..|+.-+|+|++--.+|. |+|.|=.++.
T Consensus 36 PENTl~AF~~A~~~Gad~IE~DV~lTkDG~---lVV~HD~tL~ 75 (316)
T cd08610 36 PENTMMSFEKAIEHGAHGLETDVTLSYDGV---PFLMHDFTLK 75 (316)
T ss_pred CccHHHHHHHHHHcCCCEEEEEEEEccCCC---EEEeCCCccc
Confidence 467899999999999999999999999998 8999998883
No 79
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=85.81 E-value=1.4 Score=28.71 Aligned_cols=46 Identities=13% Similarity=0.091 Sum_probs=35.7
Q ss_pred CCCHHHHHHHHHHHcCCc---hHHHHHHHhhhCCCcccccCCCCCHHHHHHHHc
Q psy9839 28 ILYTTGCIELLEYGQLQF---RHGNHRRTQRHEPDSGLRSQHCLSFEGFARYLM 78 (197)
Q Consensus 28 ~l~~~~l~~FL~~eQ~e~---~~~~~~iI~kyep~~~~r~~~~ls~~gF~~fL~ 78 (197)
.++.++|..+| ...+.. ..++..|+..+.++. .+.+++++|..+|.
T Consensus 4 ~i~~~~~~~~l-~~~g~~~~s~~e~~~l~~~~D~~~----~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 4 KITREEFRRAL-SKLGIKDLSEEEVDRLFREFDTDG----DGYISFDEFISMMQ 52 (54)
T ss_dssp EEEHHHHHHHH-HHTTSSSSCHHHHHHHHHHHTTSS----SSSEEHHHHHHHHH
T ss_pred EECHHHHHHHH-HHhCCCCCCHHHHHHHHHhcccCC----CCCCCHHHHHHHHH
Confidence 57889999999 544433 237999999998764 56799999999875
No 80
>cd08578 GDPD_NUC-2_fungi Putative glycerophosphodiester phosphodiesterase domain of ankyrin repeat protein NUC-2 and similar proteins. This subfamily corresponds to a putative glycerophosphodiester phosphodiesterase domain (GDPD) present in Neurospora crassa ankyrin repeat protein NUC-2 and its Saccharomyces cerevisiae counterpart, Phosphate system positive regulatory protein PHO81. Some uncharecaterized NUC-2 sequence homologs are also included in this family. NUC-2 plays an important role in the phosphate-regulated signal transduction pathway in Neurospora crassa. It shows high similarity to a cyclin-dependent kinase inhibitory protein PHO81, which is part of the phosphate regulatory cascade in S. cerevisiae. Both NUC-2 and PHO81 have multi-domain architecture, including an SPX N-terminal domain following by several ankyrin repeats and a putative C-terminal GDPD domain with unknown function. Although the putative GDPD domain displays sequence homology to that of bacterial glycerophos
Probab=85.46 E-value=0.83 Score=41.27 Aligned_cols=37 Identities=8% Similarity=-0.157 Sum_probs=33.5
Q ss_pred CcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccc
Q psy9839 123 SSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAV 162 (197)
Q Consensus 123 SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ 162 (197)
++...++.|-..|+.-+|+||+--.+|. |+|+|-+++
T Consensus 16 ~~~~sfvtAsslgad~VE~DVqLTkDgv---pVV~HD~~i 52 (300)
T cd08578 16 KDGNSFVTASSLSGEYLRVKVCVLKDGT---PVVAPEWFV 52 (300)
T ss_pred CCchhHHHHHHcCCCEEEEEEEECcCCE---EEEECCCce
Confidence 4567899999999999999999989997 999999887
No 81
>COG0584 UgpQ Glycerophosphoryl diester phosphodiesterase [Energy production and conversion]
Probab=84.75 E-value=0.78 Score=38.92 Aligned_cols=39 Identities=5% Similarity=0.026 Sum_probs=35.0
Q ss_pred CCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccc
Q psy9839 121 GESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAV 162 (197)
Q Consensus 121 g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ 162 (197)
.+-+.++|..|+..|+..||+|++--.+|. ++|+|=+++
T Consensus 19 PENTl~Af~~A~~~gad~iE~Dv~lTkDg~---lVv~HD~~~ 57 (257)
T COG0584 19 PENTLAAFELAAEQGADYIELDVQLTKDGV---LVVIHDETL 57 (257)
T ss_pred CcchHHHHHHHHHcCCCEEEeeccCccCCc---EEEecccch
Confidence 367899999999999999999999999998 899997744
No 82
>KOG2258|consensus
Probab=83.67 E-value=0.93 Score=41.51 Aligned_cols=40 Identities=15% Similarity=0.191 Sum_probs=34.8
Q ss_pred CCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeeccccc
Q psy9839 121 GESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVM 163 (197)
Q Consensus 121 g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~t 163 (197)
-+.+..+|.+|+..|+.++|+|+...++|. +++-|--+..
T Consensus 82 penT~~A~~~a~~~Gad~ie~dV~~TsDg~---~v~l~d~~~~ 121 (341)
T KOG2258|consen 82 PENTLAAYKKAIADGADLIELDVQMTSDGV---PVILHDSTTV 121 (341)
T ss_pred CcccHHHHHHHHHcCCcEEEeccccCCCCc---eEEeecCcce
Confidence 457899999999999999999999999997 7888876554
No 83
>cd08585 GDPD_like_3 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity with Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=83.43 E-value=1.2 Score=38.30 Aligned_cols=38 Identities=8% Similarity=0.065 Sum_probs=34.0
Q ss_pred CCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccc
Q psy9839 121 GESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAV 162 (197)
Q Consensus 121 g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ 162 (197)
-+-+..+|..|+..|+ .+|+|++--.+|. |+|.|=.++
T Consensus 20 pENTl~af~~A~~~G~-~iE~DV~lT~Dg~---lVv~HD~~l 57 (237)
T cd08585 20 PENSLSAFRAAAEAGY-GIELDVQLTADGE---VVVFHDDNL 57 (237)
T ss_pred CccHHHHHHHHHHcCC-cEEEEeeECCCCC---EEEeccchH
Confidence 4567899999999999 6999999999998 899998776
No 84
>cd08603 GDPD_SHV3_repeat_1 Glycerophosphodiester phosphodiesterase domain repeat 1 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 1 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP
Probab=81.11 E-value=1.9 Score=39.14 Aligned_cols=39 Identities=13% Similarity=0.002 Sum_probs=35.1
Q ss_pred CCCcHHHHHHHHHhcCC--CcceeeeeCCCCCcccceeeecccc
Q psy9839 121 GESSVDLYSQFISDYNG--EDHYFTRIGPGGLLNLDKIYKTHAV 162 (197)
Q Consensus 121 g~SS~e~Y~~aL~~g~r--~~e~d~~~g~~g~ln~p~i~hg~t~ 162 (197)
-+.+.++|..|+..|++ .+|+|++--.+|. |++.|-.++
T Consensus 14 PEnTl~Ay~~Ai~~Ga~~d~IE~DV~lTkDgv---lVv~HD~~L 54 (299)
T cd08603 14 PDSSLFAYQFAASSSSPDVALWCDLQLTKDGV---GICLPDLNL 54 (299)
T ss_pred CcchHHHHHHHHHcCCCCCEEEEEeeECcCCc---EEEeCCccc
Confidence 46789999999999996 5999999999997 999999887
No 85
>cd08613 GDPD_GDE4_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial homologs of mammalian glycerophosphodiester phosphodiesterase GDE4. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial homologs of mammalian GDE4, a transmembrane protein whose cellular function has not been elucidated yet.
Probab=79.91 E-value=1.7 Score=39.74 Aligned_cols=38 Identities=5% Similarity=-0.015 Sum_probs=35.0
Q ss_pred CCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccc
Q psy9839 122 ESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAV 162 (197)
Q Consensus 122 ~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ 162 (197)
+-+.++|..|+..|+..+|+|++--.+|. ++|.|=.++
T Consensus 60 ENTl~Af~~A~~~Gad~IE~DV~lTkDg~---lVV~HD~tL 97 (309)
T cd08613 60 ENTIASMQAAFDAGADVVELDVHPTKDGE---FAVFHDWTL 97 (309)
T ss_pred chHHHHHHHHHHcCCCEEEEEEEEccCCe---EEEEecCcc
Confidence 56789999999999999999999999998 899998887
No 86
>cd08622 PI-PLCXDc_CG14945_like Catalytic domain of Drosophila melanogaster CG14945-like proteins similar to phosphatidylinositol-specific phospholipase C, X domain containing. This subfamily corresponds to the catalytic domain present in uncharacterized metazoan Drosophila melanogaster CG14945-like proteins, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI
Probab=76.71 E-value=2.9 Score=37.07 Aligned_cols=78 Identities=10% Similarity=-0.083 Sum_probs=50.1
Q ss_pred CCCccchhcccCCcceeecccc---------cCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccccchh
Q psy9839 98 EMPLSHYFIASSHNTYLTGHQL---------KGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMDRIAS 168 (197)
Q Consensus 98 ~~PLshYFIsSSHNTYL~G~Ql---------~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts~I~~ 168 (197)
+.||++=+|--|||+.-.+-.. .+..-......-|..|+|-..+-+...+....+ -.++||-. +-.++
T Consensus 6 ~~~l~~l~iPGtHdS~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiRylDlRv~~~~~~~~~-~~~~Hg~~--~~~~l 82 (276)
T cd08622 6 NLRIKDLFIPGTHNSAAYDTNSNANESLVDKYLLTQDLDIWTQLVHGIRYLDLRVGYYPDSPDN-FWINHDLV--RIVPL 82 (276)
T ss_pred CceeeeeeccccchhhhcCCCCcccchhhhhhhcccCCcHHHHHhhCCeEEEEEeeccCCCCCc-EEEECccc--ccccH
Confidence 4689999999999965332211 012222334567889999988888543321111 36778743 33889
Q ss_pred hHHHHHHhhh
Q psy9839 169 FHLHYHQREH 178 (197)
Q Consensus 169 ~~v~~~Ik~~ 178 (197)
.++++.||++
T Consensus 83 ~~vL~~v~~F 92 (276)
T cd08622 83 LTVLNDVRNF 92 (276)
T ss_pred HHHHHHHHHH
Confidence 9999999986
No 87
>cd08620 PI-PLCXDc_like_1 Catalytic domain of uncharacterized hypothetical proteins similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins. This subfamily corresponds to the catalytic domain present in a group of uncharacterized hypothetical proteins found in bacteria and fungi, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidyl
Probab=74.67 E-value=3.5 Score=37.00 Aligned_cols=79 Identities=10% Similarity=0.035 Sum_probs=50.5
Q ss_pred CCCccchhcccCCcceeecccccCCCcHHHHHHHHHhcCCCcceeeeeCC------CCCcccceeeecccccccchhhHH
Q psy9839 98 EMPLSHYFIASSHNTYLTGHQLKGESSVDLYSQFISDYNGEDHYFTRIGP------GGLLNLDKIYKTHAVMDRIASFHL 171 (197)
Q Consensus 98 ~~PLshYFIsSSHNTYL~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~------~g~ln~p~i~hg~t~ts~I~~~~v 171 (197)
++||++..|--|||+...+---.+..-......=|..|+|...+=+--.+ .+. ..+||.|-+.+-.++.++
T Consensus 6 ~~~l~~l~iPGtHDSg~~~~~~~s~tQ~~~i~~QL~~GiRyfDlRv~~~~~~~~~~~~~---~~~~~~Hg~~~~~~l~~~ 82 (281)
T cd08620 6 QQPFNRFVLPGAHDAGMNGMTNLSVTQKDNVSTQLALGARYFDFRPGYLWPQTRVLVLL---NDLYHQHNMIPGQGFDTF 82 (281)
T ss_pred CcchhheeecCCCcccccCCCchhhcCCccHHHHHhcCcEEEEEEeeeccCcccccccc---CcEEEEeeccCCCcHHHH
Confidence 67999999999999764442222232233456678899998665432111 112 234555555566799999
Q ss_pred HHHHhhhc
Q psy9839 172 HYHQREHD 179 (197)
Q Consensus 172 ~~~Ik~~A 179 (197)
++.|+.+.
T Consensus 83 L~~i~~FL 90 (281)
T cd08620 83 LQDVVTFL 90 (281)
T ss_pred HHHHHHHH
Confidence 99999864
No 88
>cd08616 PI-PLCXD1c Catalytic domain of phosphatidylinositol-specific phospholipase C, X domain containing 1. This subfamily corresponds to the catalytic domain present in a group of phosphatidylinositol-specific phospholipase C X domain containing 1 (PI-PLCXD1), 2 (PI-PLCXD2) and 3 (PI-PLCXD3), which are bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) sequence homologs found in vertebrates. The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, members in this group contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to
Probab=74.60 E-value=3.2 Score=37.02 Aligned_cols=76 Identities=12% Similarity=-0.011 Sum_probs=48.4
Q ss_pred CCCccchhcccCCc--ceeeccc-ccC------------------------CCcHHHHHHHHHhcCCCcceeeeeCC-CC
Q psy9839 98 EMPLSHYFIASSHN--TYLTGHQ-LKG------------------------ESSVDLYSQFISDYNGEDHYFTRIGP-GG 149 (197)
Q Consensus 98 ~~PLshYFIsSSHN--TYL~G~Q-l~g------------------------~SS~e~Y~~aL~~g~r~~e~d~~~g~-~g 149 (197)
+.||.+..|--||| ||-+... -.| ..-......-|..|+|-..+.+...+ .|
T Consensus 7 ~~~L~~l~iPGsHdS~ty~~~~~s~~~pd~~~~~~~~~~~~~~~~~v~~~s~tQ~~~i~~QL~~GiRyfDlRv~~~~~~~ 86 (290)
T cd08616 7 DKPLTNLAIPGSHDSFTYSIDKQSPVSPDQSVQNLVKVFPCIFKKIVKKWSKTQSLTITEQLEAGIRYFDLRIATKPKDN 86 (290)
T ss_pred hCchheEecCCCCCccceecCCCCCCCchhhhhhhhhhcccchhhhhhHHhhCCCCcHHHHHhcCceEEEEEecccCCCC
Confidence 47999999999999 5544321 111 11112234456779999888774432 23
Q ss_pred CcccceeeecccccccchhhHHHHHHhhhc
Q psy9839 150 LLNLDKIYKTHAVMDRIASFHLHYHQREHD 179 (197)
Q Consensus 150 ~ln~p~i~hg~t~ts~I~~~~v~~~Ik~~A 179 (197)
. -.++||- + +. .+.+++..|+++.
T Consensus 87 ~---~~~~Hg~-~-~~-~~~~~L~~i~~fl 110 (290)
T cd08616 87 D---LYFVHGL-Y-GI-LVKEILEEINDFL 110 (290)
T ss_pred c---EEEEEec-c-ch-hHHHHHHHHHHHH
Confidence 2 3788883 2 33 9999999999863
No 89
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=71.91 E-value=11 Score=27.73 Aligned_cols=49 Identities=10% Similarity=0.082 Sum_probs=36.5
Q ss_pred CCCCCHHHHHHHHHHH--cCCchH--HHHHHHhhhCCCcccccCCCCCHHHHHHHHc
Q psy9839 26 CPILYTTGCIELLEYG--QLQFRH--GNHRRTQRHEPDSGLRSQHCLSFEGFARYLM 78 (197)
Q Consensus 26 ~~~l~~~~l~~FL~~e--Q~e~~~--~~~~iI~kyep~~~~r~~~~ls~~gF~~fL~ 78 (197)
+..++.++|.+.|.++ .++..+ ++.++++....+. .+.+++++|..++.
T Consensus 26 ~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~----dG~Idf~EFv~lm~ 78 (88)
T cd05029 26 KNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNK----DQEVNFQEYVTFLG 78 (88)
T ss_pred CCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCC----CCCCcHHHHHHHHH
Confidence 3478899999999752 455443 7888998876543 46799999998875
No 90
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=68.54 E-value=24 Score=21.45 Aligned_cols=48 Identities=10% Similarity=0.059 Sum_probs=33.9
Q ss_pred CCCCCHHHHHHHHHHHcCCc-hHHHHHHHhhhCCCcccccCCCCCHHHHHHHH
Q psy9839 26 CPILYTTGCIELLEYGQLQF-RHGNHRRTQRHEPDSGLRSQHCLSFEGFARYL 77 (197)
Q Consensus 26 ~~~l~~~~l~~FL~~eQ~e~-~~~~~~iI~kyep~~~~r~~~~ls~~gF~~fL 77 (197)
...++.++|...++...... ...+..++.++.++. .+.+++++|..++
T Consensus 14 ~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~ef~~~~ 62 (63)
T cd00051 14 DGTISADELKAALKSLGEGLSEEEIDEMIREVDKDG----DGKIDFEEFLELM 62 (63)
T ss_pred CCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCC----CCeEeHHHHHHHh
Confidence 34677888999888754322 236778888887653 4569999998875
No 91
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=67.68 E-value=31 Score=22.44 Aligned_cols=48 Identities=15% Similarity=-0.056 Sum_probs=35.2
Q ss_pred CCCCCCHHHHHHHHHHHcCCchHHHHHHHhhhCCCcccccCCCCCHHHHHHHH
Q psy9839 25 MCPILYTTGCIELLEYGQLQFRHGNHRRTQRHEPDSGLRSQHCLSFEGFARYL 77 (197)
Q Consensus 25 ~~~~l~~~~l~~FL~~eQ~e~~~~~~~iI~kyep~~~~r~~~~ls~~gF~~fL 77 (197)
....++.++|..+|... +.....+..++..+.++. .+.++++.|...+
T Consensus 12 ~~G~i~~~el~~~l~~~-g~~~~~~~~i~~~~d~~~----~g~i~~~ef~~~~ 59 (67)
T cd00052 12 GDGLISGDEARPFLGKS-GLPRSVLAQIWDLADTDK----DGKLDKEEFAIAM 59 (67)
T ss_pred CCCcCcHHHHHHHHHHc-CCCHHHHHHHHHHhcCCC----CCcCCHHHHHHHH
Confidence 34568889999999875 344447888888876543 4569999998765
No 92
>PTZ00184 calmodulin; Provisional
Probab=65.88 E-value=24 Score=26.28 Aligned_cols=13 Identities=23% Similarity=0.677 Sum_probs=6.7
Q ss_pred CCCHHHHHHHHcC
Q psy9839 67 CLSFEGFARYLMD 79 (197)
Q Consensus 67 ~ls~~gF~~fL~S 79 (197)
.+++++|..++.+
T Consensus 136 ~i~~~ef~~~~~~ 148 (149)
T PTZ00184 136 QINYEEFVKMMMS 148 (149)
T ss_pred cCcHHHHHHHHhc
Confidence 3555555555543
No 93
>cd08621 PI-PLCXDc_like_2 Catalytic domain of uncharacterized hypothetical proteins similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins. This subfamily corresponds to the catalytic domain present in a group of uncharacterized hypothetical proteins found in bacteria and fungi, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidyl
Probab=65.01 E-value=7.9 Score=34.83 Aligned_cols=79 Identities=11% Similarity=-0.006 Sum_probs=50.9
Q ss_pred CCCccchhcccCCccee---ecc-------cccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeeccccc----
Q psy9839 98 EMPLSHYFIASSHNTYL---TGH-------QLKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVM---- 163 (197)
Q Consensus 98 ~~PLshYFIsSSHNTYL---~G~-------Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~t---- 163 (197)
+.||++-.|=-|||+.- .+. .-.+..-......=|..|+|...+-+--..+|. =.++||.-..
T Consensus 6 ~~~L~~l~iPGTHdS~~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiRyfDlRv~~~~~~~---~~~~H~~~~~~~~~ 82 (300)
T cd08621 6 DRPLRHIVMPGTHDSGMSSLTGGLWPVDGNDSNTQTQGLSIYDQLRAGARYFDIRPVITHGGE---LWTGHYNGEDASAQ 82 (300)
T ss_pred CeEhhhccccccchhccccccCCCccccccccccccCCCCHHHHHhcCCcEEEEEEEEcCCCc---EEEEeccccccccc
Confidence 47999999999999642 221 111222223345678899999776664333343 3678875432
Q ss_pred --ccchhhHHHHHHhhhc
Q psy9839 164 --DRIASFHLHYHQREHD 179 (197)
Q Consensus 164 --s~I~~~~v~~~Ik~~A 179 (197)
...++.++++.|+.+.
T Consensus 83 G~~~~~l~~vL~~v~~Fl 100 (300)
T cd08621 83 GANGESLDDILDEVNRFT 100 (300)
T ss_pred CcCCCcHHHHHHHHHHHH
Confidence 2578999999999863
No 94
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=58.94 E-value=33 Score=25.32 Aligned_cols=48 Identities=15% Similarity=0.103 Sum_probs=35.4
Q ss_pred CCCCHHHHHHHHHHHcC------CchHHHHHHHhhhCCCcccccCCCCCHHHHHHHHc
Q psy9839 27 PILYTTGCIELLEYGQL------QFRHGNHRRTQRHEPDSGLRSQHCLSFEGFARYLM 78 (197)
Q Consensus 27 ~~l~~~~l~~FL~~eQ~------e~~~~~~~iI~kyep~~~~r~~~~ls~~gF~~fL~ 78 (197)
..|+.++|..||..+-. .....+.++++....+ ..+.+++++|+.++.
T Consensus 26 ~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d----~DG~I~f~EF~~l~~ 79 (89)
T cd05023 26 YQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLN----SDGQLDFQEFLNLIG 79 (89)
T ss_pred CeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCC----CCCcCcHHHHHHHHH
Confidence 37889999999998831 1223688888876543 356799999998875
No 95
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=54.93 E-value=26 Score=23.17 Aligned_cols=48 Identities=10% Similarity=0.099 Sum_probs=34.3
Q ss_pred CCCCCHHHHHHHHHHHcCCch-----HHHHHHHhhhCCCcccccCCCCCHHHHHHHH
Q psy9839 26 CPILYTTGCIELLEYGQLQFR-----HGNHRRTQRHEPDSGLRSQHCLSFEGFARYL 77 (197)
Q Consensus 26 ~~~l~~~~l~~FL~~eQ~e~~-----~~~~~iI~kyep~~~~r~~~~ls~~gF~~fL 77 (197)
.-.++.++|.+++........ ..+..+++.+.++ ..+.+++++|..++
T Consensus 14 ~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d----~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 14 DGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTD----GDGRISFDEFLNFM 66 (66)
T ss_dssp SSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTT----SSSSEEHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCC----CcCCCcHHHHhccC
Confidence 345678888888888765321 1566778887765 35679999999874
No 96
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=54.47 E-value=56 Score=23.72 Aligned_cols=49 Identities=10% Similarity=-0.122 Sum_probs=36.3
Q ss_pred CCCCCCHHHHHHHHHHHcCCchHHHHHHHhhhCCCcccccCCCCCHHHHHHHHc
Q psy9839 25 MCPILYTTGCIELLEYGQLQFRHGNHRRTQRHEPDSGLRSQHCLSFEGFARYLM 78 (197)
Q Consensus 25 ~~~~l~~~~l~~FL~~eQ~e~~~~~~~iI~kyep~~~~r~~~~ls~~gF~~fL~ 78 (197)
....++.++|.++|+.. +-...++..++..+.++ ..+.+++++|..++.
T Consensus 23 ~~G~Is~~el~~~l~~~-~~~~~ev~~i~~~~d~~----~~g~I~~~eF~~~~~ 71 (96)
T smart00027 23 QDGTVTGAQAKPILLKS-GLPQTLLAKIWNLADID----NDGELDKDEFALAMH 71 (96)
T ss_pred CCCeEeHHHHHHHHHHc-CCCHHHHHHHHHHhcCC----CCCCcCHHHHHHHHH
Confidence 34578899999999874 44444788888887654 356799999998765
No 97
>cd08619 PI-PLCXDc_plant Catalytic domain of phosphatidylinositol-specific phospholipase C, X domain containing proteins found in plants. The CD corresponds to the catalytic domain present in uncharacterized plant phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, plant PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although the biological function of plant PI-PLCXDs still remains u
Probab=49.45 E-value=19 Score=32.76 Aligned_cols=76 Identities=5% Similarity=-0.015 Sum_probs=52.2
Q ss_pred CCCCCCCccchhcccCCcceee--c-ccc---cCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccccch
Q psy9839 94 DLDMEMPLSHYFIASSHNTYLT--G-HQL---KGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMDRIA 167 (197)
Q Consensus 94 ~qDM~~PLshYFIsSSHNTYL~--G-~Ql---~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts~I~ 167 (197)
..+-+.||++=.|--||||.-. | ..+ .+..-...+..=|..|+|..+|-+-. + -.++||.. ...+
T Consensus 22 ~~~~~l~L~~L~IPGTHDS~t~~~~~~~~~~~~s~tQ~~sI~~QL~~GiRyfDiRv~~---~----~~~~HG~~--~~~~ 92 (285)
T cd08619 22 AMDSSLKLRDIVWPGTHDSATNKIGIPKVSRPFARCQSLSIYNQLCSGARVLDIRVQE---D----RRVCHGCL--KTYP 92 (285)
T ss_pred cCCCCcEeeheeeCCCccccccCCCCCccccccccccCCcHHHHHhCCceEEEEEecC---C----eEEECCCc--CCCc
Confidence 4566789999999999996642 2 111 12333334567788999997766532 2 37899963 2468
Q ss_pred hhHHHHHHhhh
Q psy9839 168 SFHLHYHQREH 178 (197)
Q Consensus 168 ~~~v~~~Ik~~ 178 (197)
+.+|++.|+++
T Consensus 93 ~~dvL~~i~~F 103 (285)
T cd08619 93 VDVVLNDIKRF 103 (285)
T ss_pred HHHHHHHHHHH
Confidence 89999999986
No 98
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=49.36 E-value=46 Score=23.98 Aligned_cols=47 Identities=11% Similarity=0.102 Sum_probs=34.1
Q ss_pred CCCHHHHHHHHHHHcCC------chHHHHHHHhhhCCCcccccCCCCCHHHHHHHHc
Q psy9839 28 ILYTTGCIELLEYGQLQ------FRHGNHRRTQRHEPDSGLRSQHCLSFEGFARYLM 78 (197)
Q Consensus 28 ~l~~~~l~~FL~~eQ~e------~~~~~~~iI~kyep~~~~r~~~~ls~~gF~~fL~ 78 (197)
.++.++|...|+.+-+. ....+.++++.+.++ ..+.++++.|..++.
T Consensus 27 ~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d----~~G~I~f~eF~~l~~ 79 (92)
T cd05025 27 KLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDEN----GDGEVDFQEFVVLVA 79 (92)
T ss_pred eECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCC----CCCcCcHHHHHHHHH
Confidence 37888999888763332 223688999988654 356799999998765
No 99
>PTZ00183 centrin; Provisional
Probab=47.26 E-value=82 Score=23.78 Aligned_cols=46 Identities=9% Similarity=-0.021 Sum_probs=19.0
Q ss_pred CCHHHHHHHHHHHcCC-chHHHHHHHhhhCCCcccccCCCCCHHHHHHHHc
Q psy9839 29 LYTTGCIELLEYGQLQ-FRHGNHRRTQRHEPDSGLRSQHCLSFEGFARYLM 78 (197)
Q Consensus 29 l~~~~l~~FL~~eQ~e-~~~~~~~iI~kyep~~~~r~~~~ls~~gF~~fL~ 78 (197)
++.++|..+|...+.. ....+..++..+..+. .+.++++.|..++.
T Consensus 107 i~~~e~~~~l~~~~~~l~~~~~~~~~~~~d~~~----~g~i~~~ef~~~~~ 153 (158)
T PTZ00183 107 ISLKNLKRVAKELGETITDEELQEMIDEADRNG----DGEISEEEFYRIMK 153 (158)
T ss_pred CcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCC----CCcCcHHHHHHHHh
Confidence 4444444444433211 1113444444443321 23355555555543
No 100
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=44.22 E-value=92 Score=22.78 Aligned_cols=47 Identities=13% Similarity=0.202 Sum_probs=33.0
Q ss_pred CCCHHHHHHHHHH------HcCCchHHHHHHHhhhCCCcccccCCCCCHHHHHHHHc
Q psy9839 28 ILYTTGCIELLEY------GQLQFRHGNHRRTQRHEPDSGLRSQHCLSFEGFARYLM 78 (197)
Q Consensus 28 ~l~~~~l~~FL~~------eQ~e~~~~~~~iI~kyep~~~~r~~~~ls~~gF~~fL~ 78 (197)
.|+.++|...|+. .+.....++.++++...++ ..+.+++++|..++.
T Consensus 26 ~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n----~dG~v~f~eF~~li~ 78 (88)
T cd05027 26 KLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSD----GDGECDFQEFMAFVA 78 (88)
T ss_pred EECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCC----CCCcCcHHHHHHHHH
Confidence 4777888888776 2222334688999987554 356799999998874
No 101
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=43.32 E-value=76 Score=22.98 Aligned_cols=49 Identities=20% Similarity=0.299 Sum_probs=34.8
Q ss_pred CCCCHHHHHHHHHHHcCCc------hHHHHHHHhhhCCCcccccCCCCCHHHHHHHHcC
Q psy9839 27 PILYTTGCIELLEYGQLQF------RHGNHRRTQRHEPDSGLRSQHCLSFEGFARYLMD 79 (197)
Q Consensus 27 ~~l~~~~l~~FL~~eQ~e~------~~~~~~iI~kyep~~~~r~~~~ls~~gF~~fL~S 79 (197)
..++.++|..+|...-++. ...+..++..+.++ ..+.++++.|..++.+
T Consensus 25 ~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d----~dG~I~f~eF~~~~~~ 79 (88)
T cd05030 25 DTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTN----QDGQLSFEEFLVLVIK 79 (88)
T ss_pred ccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCC----CCCcCcHHHHHHHHHH
Confidence 4688889998887543332 23678888887554 3567999999988763
No 102
>PTZ00268 glycosylphosphatidylinositol-specific phospholipase C; Provisional
Probab=42.36 E-value=22 Score=33.61 Aligned_cols=48 Identities=8% Similarity=-0.105 Sum_probs=27.9
Q ss_pred HHHHHhcCCCcceeeeeCCCCCcccceeeecccccccchhhHHHHHHhhhcC
Q psy9839 129 SQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMDRIASFHLHYHQREHDT 180 (197)
Q Consensus 129 ~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts~I~~~~v~~~Ik~~Af 180 (197)
.+=|..|+|...|=|-..++.. +--.+.||.. .+++.+|++.|+++.-
T Consensus 91 ~eQL~~GVRYfDIRV~~~~~~~-~~~~~~Hgl~---~~~~~dvL~dv~~FL~ 138 (380)
T PTZ00268 91 RAQLDHGVRYLDLRVATNPEDA-NRLYISHTQI---SVPLADVLEDVKAFLN 138 (380)
T ss_pred HHHHhCCeEEEEEEecccCCCC-CcEEEEecee---ceEHHHHHHHHHHHHh
Confidence 3445667877555443222111 1135566542 4789999999999743
No 103
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=41.81 E-value=1.1e+02 Score=22.33 Aligned_cols=47 Identities=13% Similarity=0.064 Sum_probs=34.3
Q ss_pred CCCHHHHHHHHHHHcCC------chHHHHHHHhhhCCCcccccCCCCCHHHHHHHHc
Q psy9839 28 ILYTTGCIELLEYGQLQ------FRHGNHRRTQRHEPDSGLRSQHCLSFEGFARYLM 78 (197)
Q Consensus 28 ~l~~~~l~~FL~~eQ~e------~~~~~~~iI~kyep~~~~r~~~~ls~~gF~~fL~ 78 (197)
.++.++|...|..+.++ ....+.++++....+ ..+.+++++|..++.
T Consensus 28 ~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n----~dG~Idf~EF~~l~~ 80 (93)
T cd05026 28 KLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSN----KDNEVDFNEFVVLVA 80 (93)
T ss_pred EECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCC----CCCCCCHHHHHHHHH
Confidence 38899999998775432 223688899887543 356799999998875
No 104
>PF01367 5_3_exonuc: 5'-3' exonuclease, C-terminal SAM fold; InterPro: IPR020045 This entry represents the C-terminal domain of 5' to 3' exonucleases. The 5'-3' exonucleases are conserved in organisms as diverse as bacteriophage and mammals. It adopts a SAM fold consisting of 4-5 helices packed into a bundle of two orthogonally packed alpha-hairpins. This domain is involved in interactions with DNA and proteins. 5' to 3' exonucleases that contain this domain include: Bacteriophage T4 RNase H, which has sequence similarity to the RAD2 family of eukaryotic proteins []. 5' to 3' exonuclease domain of DNA polymerase Taq, which is homologous to Escherichia coli DNA polymerase I (pol I) [, ]. Bacteriophage T5 5'-exonuclease, which are structure-specific endonucleases []. Flap endonuclease-1 (Fen-1 nuclease), a structure specific nuclease that is an essential enzyme for eukaryotic DNA replication and repair []. ; GO: 0003677 DNA binding, 0003824 catalytic activity; PDB: 1TAQ_A 1BGX_T 1TAU_A 1XO1_B 1EXN_A 1UT8_A 1UT5_B.
Probab=40.19 E-value=14 Score=28.48 Aligned_cols=13 Identities=62% Similarity=0.915 Sum_probs=8.0
Q ss_pred cccCCCCCCcccc
Q psy9839 7 ELMGDSSDNHPAC 19 (197)
Q Consensus 7 ~~~~~~~~~~~~~ 19 (197)
-||||+|||-|+-
T Consensus 11 aL~GD~sDNIPGV 23 (101)
T PF01367_consen 11 ALVGDSSDNIPGV 23 (101)
T ss_dssp CCC-CCCCTB---
T ss_pred HHcCCcccCCCCC
Confidence 4899999998864
No 105
>PRK14607 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional
Probab=37.26 E-value=1.1e+02 Score=29.69 Aligned_cols=131 Identities=15% Similarity=0.077 Sum_probs=74.4
Q ss_pred cccCCCCCCC-CCCHHHHHHHHHHHcCCchHHHHHHHhhhCCCcccccCCCCCHHHHHHHHcCCCCCCCcccccCCCCCC
Q psy9839 18 ACVRGQEMCP-ILYTTGCIELLEYGQLQFRHGNHRRTQRHEPDSGLRSQHCLSFEGFARYLMDKDNFAFASERMCPDDLD 96 (197)
Q Consensus 18 ~~~~~~e~~~-~l~~~~l~~FL~~eQ~e~~~~~~~iI~kyep~~~~r~~~~ls~~gF~~fL~S~~n~~~~~~~~~~v~qD 96 (197)
+.+=|||... -....=|.+|++..+.+. ..+++|++-- ....||.++....+-.=-+.-..+..
T Consensus 165 GvQFHPE~~~t~~g~~i~~nFl~~~~~~~--~~~~~i~~l~------~g~~Lt~~ea~~~~~~il~g~~~~~q------- 229 (534)
T PRK14607 165 GVQFHPESILTEEGKRILKNFLNYQREEI--DIKSYLKKLV------EGEDLSFEEAEDVMEDITDGNATDAQ------- 229 (534)
T ss_pred EEEeCCCCCCChhHHHHHHHHHHHhhccC--CHHHHHHHhc------cCCCCCHHHHHHHHHHHHcCCCCHHH-------
Confidence 5677888421 122445667887665332 3566666632 12357777665443211111111111
Q ss_pred CCCCccchhcccCCcceeecccccCCCcH--HHHHHHHHhcCCCc------cee-eeeCCCCCc--c-------------
Q psy9839 97 MEMPLSHYFIASSHNTYLTGHQLKGESSV--DLYSQFISDYNGED------HYF-TRIGPGGLL--N------------- 152 (197)
Q Consensus 97 M~~PLshYFIsSSHNTYL~G~Ql~g~SS~--e~Y~~aL~~g~r~~------e~d-~~~g~~g~l--n------------- 152 (197)
| =.+|++-.++|++.. .++.+|++.-+.-+ -+| ||.|-+|.. |
T Consensus 230 ---------~----~AfL~alr~kget~~El~g~~~a~~~~~~~~~~~~~~~~D~~gtggdg~~t~nist~~a~v~A~~G 296 (534)
T PRK14607 230 ---------I----AGFLTALRMKGETADELAGFASVMREKSRHIPAPSPRTVDTCGTGGDGFGTFNISTTSAFVVAAAG 296 (534)
T ss_pred ---------H----HHHHHHHHHhCCCHHHHHHHHHHHHHhCCcCCCCCCCceEEccCCCCCCCccccHHHHHHHHHhCC
Confidence 1 147778788888654 35778887644322 255 466655532 3
Q ss_pred cceeeecc-cccccchhhHHHHHHh
Q psy9839 153 LDKIYKTH-AVMDRIASFHLHYHQR 176 (197)
Q Consensus 153 ~p~i~hg~-t~ts~I~~~~v~~~Ik 176 (197)
+|++.||. .++++.-..||++++.
T Consensus 297 ~~V~kHG~r~~ss~~Gsadvle~lG 321 (534)
T PRK14607 297 VPVAKHGNRAVSSKSGSADVLEALG 321 (534)
T ss_pred CcEEEECCCCCCCCccHHHHHHHcC
Confidence 39999994 6677888888888773
No 106
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=37.08 E-value=1.2e+02 Score=21.98 Aligned_cols=48 Identities=13% Similarity=0.108 Sum_probs=32.9
Q ss_pred CCCCHHHHHHHHHHHcC------CchHHHHHHHhhhCCCcccccCCCCCHHHHHHHHc
Q psy9839 27 PILYTTGCIELLEYGQL------QFRHGNHRRTQRHEPDSGLRSQHCLSFEGFARYLM 78 (197)
Q Consensus 27 ~~l~~~~l~~FL~~eQ~------e~~~~~~~iI~kyep~~~~r~~~~ls~~gF~~fL~ 78 (197)
..++.++|...|....+ .....+..+++.+.++ ..+.++++.|...+.
T Consensus 25 G~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~----~dg~I~f~eF~~l~~ 78 (94)
T cd05031 25 NTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQN----RDGKVNFEEFVSLVA 78 (94)
T ss_pred CeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCC----CCCcCcHHHHHHHHH
Confidence 35777888877765321 1223688889887654 346799999998775
No 107
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=36.39 E-value=73 Score=23.61 Aligned_cols=48 Identities=21% Similarity=0.255 Sum_probs=30.0
Q ss_pred CCCHHHHHHHHHHHcCCc--h-HHHHHHHhhhCCCcccccCCCCCHHHHHHHHcC
Q psy9839 28 ILYTTGCIELLEYGQLQF--R-HGNHRRTQRHEPDSGLRSQHCLSFEGFARYLMD 79 (197)
Q Consensus 28 ~l~~~~l~~FL~~eQ~e~--~-~~~~~iI~kyep~~~~r~~~~ls~~gF~~fL~S 79 (197)
.|+.++|...|..+=++. . ..+..+|+....+ ..+.+++++|..++.+
T Consensus 25 ~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d----~DG~I~F~EF~~l~~~ 75 (89)
T cd05022 25 SLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVN----QDSKLSFEEFWELIGE 75 (89)
T ss_pred eECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCC----CCCCCcHHHHHHHHHH
Confidence 445555555555432221 1 3688888876654 3567999999988754
No 108
>PF14658 EF-hand_9: EF-hand domain
Probab=34.46 E-value=1.5e+02 Score=21.30 Aligned_cols=51 Identities=10% Similarity=0.073 Sum_probs=38.2
Q ss_pred CCCCCCHHHHHHHHHHHcC-CchH-HHHHHHhhhCCCcccccCCCCCHHHHHHHHc
Q psy9839 25 MCPILYTTGCIELLEYGQL-QFRH-GNHRRTQRHEPDSGLRSQHCLSFEGFARYLM 78 (197)
Q Consensus 25 ~~~~l~~~~l~~FL~~eQ~-e~~~-~~~~iI~kyep~~~~r~~~~ls~~gF~~fL~ 78 (197)
-...+....+..+|+..-+ .+.. ..+.|++.+.|+.. .+.+.+++|..-|.
T Consensus 11 ~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~---~~~v~~d~F~~iM~ 63 (66)
T PF14658_consen 11 KTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGR---DGSVNFDTFLAIMR 63 (66)
T ss_pred CCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCC---CceEeHHHHHHHHH
Confidence 3445668899999999766 4443 78889998887643 46799999987663
No 109
>KOG0456|consensus
Probab=33.19 E-value=24 Score=34.16 Aligned_cols=59 Identities=20% Similarity=0.092 Sum_probs=43.8
Q ss_pred HHHhcCCCcceeeeeCCCCCc-ccceeeecccccccchhhHHHHHHhhhcC-hhHH--HhHHHhhh
Q psy9839 131 FISDYNGEDHYFTRIGPGGLL-NLDKIYKTHAVMDRIASFHLHYHQREHDT-NPVR--ETMRQARR 192 (197)
Q Consensus 131 aL~~g~r~~e~d~~~g~~g~l-n~p~i~hg~t~ts~I~~~~v~~~Ik~~Af-~~v~--~~~~~~~~ 192 (197)
.+-.+.+-.||-+|-..+|.+ +-|.+|.|..+.+.+.|.+.-+-- | | ++|. .||++||+
T Consensus 291 ~i~~al~~~EiQVWKdVDGv~T~DP~~~p~Ar~vp~lT~dEAaELa--Y-fGaqVlHP~sM~~~~~ 353 (559)
T KOG0456|consen 291 TIGKALGLDEIQVWKDVDGVLTCDPRIYPGARLVPYLTFDEAAELA--Y-FGAQVLHPFSMRPARE 353 (559)
T ss_pred HHHHHcCchhhhhhhhcCceEecCCccCCCccccCccCHHHHHHHH--h-hhhhhccccccchhhc
Confidence 344566788999999999955 459999999999999998865431 1 2 4443 57888876
No 110
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=32.89 E-value=1.7e+02 Score=20.46 Aligned_cols=49 Identities=14% Similarity=0.064 Sum_probs=33.3
Q ss_pred CCCCCHHHHHHHHHHHcCC------chHHHHHHHhhhCCCcccccCCCCCHHHHHHHHc
Q psy9839 26 CPILYTTGCIELLEYGQLQ------FRHGNHRRTQRHEPDSGLRSQHCLSFEGFARYLM 78 (197)
Q Consensus 26 ~~~l~~~~l~~FL~~eQ~e------~~~~~~~iI~kyep~~~~r~~~~ls~~gF~~fL~ 78 (197)
...++.++|..++...=+. ....+..++..+..+. .+.++++.|+..+.
T Consensus 24 ~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~----~g~I~f~eF~~~~~ 78 (88)
T cd00213 24 KDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNK----DGKVDFQEFLVLIG 78 (88)
T ss_pred CCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCC----CCcCcHHHHHHHHH
Confidence 4457788888888652111 1236788888876543 45799999998875
No 111
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=31.67 E-value=1.1e+02 Score=20.96 Aligned_cols=45 Identities=13% Similarity=0.138 Sum_probs=31.1
Q ss_pred CCHHHHHHHHHHHcCCchH-HHHHHHhhhCCCcccccCCCCCHHHHHHHH
Q psy9839 29 LYTTGCIELLEYGQLQFRH-GNHRRTQRHEPDSGLRSQHCLSFEGFARYL 77 (197)
Q Consensus 29 l~~~~l~~FL~~eQ~e~~~-~~~~iI~kyep~~~~r~~~~ls~~gF~~fL 77 (197)
|+..++.+||+...=+... .|..|+++...+. .+.|..++|..|.
T Consensus 2 msf~Evk~lLk~~NI~~~~~yA~~LFq~~D~s~----~g~Le~~Ef~~Fy 47 (51)
T PF14788_consen 2 MSFKEVKKLLKMMNIEMDDEYARQLFQECDKSQ----SGRLEGEEFEEFY 47 (51)
T ss_dssp BEHHHHHHHHHHTT----HHHHHHHHHHH-SSS----SSEBEHHHHHHHH
T ss_pred CCHHHHHHHHHHHccCcCHHHHHHHHHHhcccC----CCCccHHHHHHHH
Confidence 5678889999987655433 7899999976543 4668888888875
No 112
>PF09499 RE_ApaLI: ApaLI-like restriction endonuclease; InterPro: IPR019036 There are four classes of restriction endonucleases: types I, II,III and IV. All types of enzymes recognise specific short DNA sequences and carry out the endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates. They differ in their recognition sequence, subunit composition, cleavage position, and cofactor requirements [, ], as summarised below: Type I enzymes (3.1.21.3 from EC) cleave at sites remote from recognition site; require both ATP and S-adenosyl-L-methionine to function; multifunctional protein with both restriction and methylase (2.1.1.72 from EC) activities. Type II enzymes (3.1.21.4 from EC) cleave within or at short specific distances from recognition site; most require magnesium; single function (restriction) enzymes independent of methylase. Type III enzymes (3.1.21.5 from EC) cleave at sites a short distance from recognition site; require ATP (but doesn't hydrolyse it); S-adenosyl-L-methionine stimulates reaction but is not required; exists as part of a complex with a modification methylase methylase (2.1.1.72 from EC). Type IV enzymes target methylated DNA. Type II restriction endonucleases (3.1.21.4 from EC) are components of prokaryotic DNA restriction-modification mechanisms that protect the organism against invading foreign DNA. These site-specific deoxyribonucleases catalyse the endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates. Of the 3000 restriction endonucleases that have been characterised, most are homodimeric or tetrameric enzymes that cleave target DNA at sequence-specific sites close to the recognition site. For homodimeric enzymes, the recognition site is usually a palindromic sequence 4-8 bp in length. Most enzymes require magnesium ions as a cofactor for catalysis. Although they can vary in their mode of recognition, many restriction endonucleases share a similar structural core comprising four beta-strands and one alpha-helix, as well as a similar mechanism of cleavage, suggesting a common ancestral origin []. However, there is still considerable diversity amongst restriction endonucleases [, ]. The target site recognition process triggers large conformational changes of the enzyme and the target DNA, leading to the activation of the catalytic centres. Like other DNA binding proteins, restriction enzymes are capable of non-specific DNA binding as well, which is the prerequisite for efficient target site location by facilitated diffusion. Non-specific binding usually does not involve interactions with the bases but only with the DNA backbone []. This entry includes R.ApaLI and R.XbaI restriction endonucleases. ApaLI recognises and cleaves the sequence GTGCAC.
Probab=31.34 E-value=17 Score=31.27 Aligned_cols=47 Identities=6% Similarity=0.008 Sum_probs=26.9
Q ss_pred CCcceeeeeCCCCCccc---ceeeecccccccchhhHHHHHHhhhcChhHHHhH
Q psy9839 137 GEDHYFTRIGPGGLLNL---DKIYKTHAVMDRIASFHLHYHQREHDTNPVRETM 187 (197)
Q Consensus 137 r~~e~d~~~g~~g~ln~---p~i~hg~t~ts~I~~~~v~~~Ik~~Af~~v~~~~ 187 (197)
+-.|||||.++..- ++ .--.-|--+|.. -..++.|+.+.|-||||-.
T Consensus 101 k~~eIDclv~n~Ay-EiKwRdAtTdgdhi~kE---htrikvi~~aGy~PIrimf 150 (191)
T PF09499_consen 101 KTFEIDCLVNNRAY-EIKWRDATTDGDHITKE---HTRIKVIKSAGYKPIRIMF 150 (191)
T ss_pred CceEEEEeecCceE-EEEEEecccCCChhhhH---HHHHHHHHHCCCcceEEEE
Confidence 56799999976541 11 011112122222 2246788999999998744
No 113
>PTZ00184 calmodulin; Provisional
Probab=30.68 E-value=2.2e+02 Score=20.95 Aligned_cols=51 Identities=8% Similarity=-0.010 Sum_probs=35.9
Q ss_pred CCCCCCHHHHHHHHHHHcCCchH-HHHHHHhhhCCCcccccCCCCCHHHHHHHHcC
Q psy9839 25 MCPILYTTGCIELLEYGQLQFRH-GNHRRTQRHEPDSGLRSQHCLSFEGFARYLMD 79 (197)
Q Consensus 25 ~~~~l~~~~l~~FL~~eQ~e~~~-~~~~iI~kyep~~~~r~~~~ls~~gF~~fL~S 79 (197)
....++.++|..+|......... .+..++..+..+ ..+.++++.|..+|..
T Consensus 24 ~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~----~~g~i~~~ef~~~l~~ 75 (149)
T PTZ00184 24 GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----GNGTIDFPEFLTLMAR 75 (149)
T ss_pred CCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcC----CCCcCcHHHHHHHHHH
Confidence 34568899999999765433322 677788877654 2456999999988763
No 114
>KOG2421|consensus
Probab=28.74 E-value=15 Score=34.69 Aligned_cols=62 Identities=15% Similarity=0.110 Sum_probs=44.4
Q ss_pred CCCCCCccchhc--ccCCcceeecccccCCCcH-----------HHHHHHHHhcCCCcceeeeeCCCCCcccceeeeccc
Q psy9839 95 LDMEMPLSHYFI--ASSHNTYLTGHQLKGESSV-----------DLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHA 161 (197)
Q Consensus 95 qDM~~PLshYFI--sSSHNTYL~G~Ql~g~SS~-----------e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t 161 (197)
.+|+.++.+||- .-|=|+|. ...|.+-. ..+-.|++.|..-+|.|+.--++.. |+|||+.-
T Consensus 309 ~~l~~~~~~~w~~~~~~l~~g~---rg~g~sy~~~~~~~~ent~~~~~~~~~~~ad~ve~dvqlt~D~~---~vvyh~f~ 382 (417)
T KOG2421|consen 309 VDLRPSLINYWKKNGLSLNTGH---RGNGTSYTVLSQVLRENTIVIVDNVLELGADLVEMDVQLTKDLV---PVVYHDFV 382 (417)
T ss_pred eecChHHhhhhcccchhhhccC---CcCCchhhhhhhhhccceeeeehhHHHhhhhHHHhhcccccCCc---eeeeccce
Confidence 899999999997 34444444 33444332 2234577889999999999877776 99999864
Q ss_pred c
Q psy9839 162 V 162 (197)
Q Consensus 162 ~ 162 (197)
+
T Consensus 383 ~ 383 (417)
T KOG2421|consen 383 L 383 (417)
T ss_pred e
Confidence 4
No 115
>PRK09522 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional
Probab=26.76 E-value=1.6e+02 Score=28.71 Aligned_cols=135 Identities=12% Similarity=-0.012 Sum_probs=75.6
Q ss_pred cccccCCCCCCCCCC-HHHHHHHHHHHcCCch--HHHHHHHhhhCCCcccccCCCCCHHHHHHHHcCCCCCCCcccccCC
Q psy9839 16 HPACVRGQEMCPILY-TTGCIELLEYGQLQFR--HGNHRRTQRHEPDSGLRSQHCLSFEGFARYLMDKDNFAFASERMCP 92 (197)
Q Consensus 16 ~~~~~~~~e~~~~l~-~~~l~~FL~~eQ~e~~--~~~~~iI~kyep~~~~r~~~~ls~~gF~~fL~S~~n~~~~~~~~~~ 92 (197)
.-+++=|||....-. ..-|.+||+-...+.. ...+++|++-- ..+.||.++-...+-.=-+.-..+..
T Consensus 164 i~GVQFHPEs~~T~~G~~il~NFl~~~~~~~~~~~~~~~~l~~~~------~~~~Lt~eea~~~~~~il~g~~~~~q--- 234 (531)
T PRK09522 164 VCGFQFHPESILTTQGARLLEQTLAWAQQKLEPTNTLQPILEKLY------QAQTLSQQESHQLFSAVVRGELKPEQ--- 234 (531)
T ss_pred EEEEEecCccccCcchHHHHHHHHHHHhhcCCCCCCHHHHHHHhh------cCCCCCHHHHHHHHHHHHcCCCCHHH---
Confidence 446777888543322 3345677766432211 14566777643 23457777665443211111111111
Q ss_pred CCCCCCCCccchhcccCCcceeecccccCCCcH--HHHHHHHHhcCCCcc------ee-eeeCCCCCc--c---------
Q psy9839 93 DDLDMEMPLSHYFIASSHNTYLTGHQLKGESSV--DLYSQFISDYNGEDH------YF-TRIGPGGLL--N--------- 152 (197)
Q Consensus 93 v~qDM~~PLshYFIsSSHNTYL~G~Ql~g~SS~--e~Y~~aL~~g~r~~e------~d-~~~g~~g~l--n--------- 152 (197)
| =.+|++-..+|++.. .++.+|++.-...+. +| ||.|-+|.. |
T Consensus 235 -------------i----~AfL~alr~kget~eEl~g~~~a~~~~~~~~~~~~~~~iD~~gtGgdg~~t~nist~aa~v~ 297 (531)
T PRK09522 235 -------------L----AAALVSMKIRGEHPNEIAGAATALLENAAPFPRPDYLFADIVGTGGDGSNSINISTASAFVA 297 (531)
T ss_pred -------------H----HHHHHHHHHhCCCHHHHHHHHHHHHHhCCCCCCCCCCcccccCCCCCCCCCcccHHHHHHHH
Confidence 1 146777777788654 357788886433221 44 377666632 2
Q ss_pred ----cceeeecc-cccccchhhHHHHHHh
Q psy9839 153 ----LDKIYKTH-AVMDRIASFHLHYHQR 176 (197)
Q Consensus 153 ----~p~i~hg~-t~ts~I~~~~v~~~Ik 176 (197)
+|++.||. .++++.-..||++++-
T Consensus 298 A~~Gv~V~kHG~r~~ss~~GsadvlealG 326 (531)
T PRK09522 298 AACGLKVAKHGNRSVSSKSGSSDLLAAFG 326 (531)
T ss_pred HhCCCcEEEeCCCCCCCCccHHHHHHHcC
Confidence 39999994 6777888888888774
No 116
>PHA02567 rnh RnaseH; Provisional
Probab=26.67 E-value=48 Score=30.45 Aligned_cols=19 Identities=16% Similarity=0.205 Sum_probs=15.4
Q ss_pred cccCCCCCCcccccCCCCC
Q psy9839 7 ELMGDSSDNHPACVRGQEM 25 (197)
Q Consensus 7 ~~~~~~~~~~~~~~~~~e~ 25 (197)
-||||+|||-|+|--+-++
T Consensus 193 aL~GDsSDNIPGVp~~~d~ 211 (304)
T PHA02567 193 IIKGDKKDGVASIKVRSDY 211 (304)
T ss_pred HhCCcccCCcCCCCCCCCe
Confidence 3899999999998766554
No 117
>PHA00439 exonuclease
Probab=25.92 E-value=31 Score=31.30 Aligned_cols=13 Identities=31% Similarity=0.488 Sum_probs=11.7
Q ss_pred cccCCCCCCcccc
Q psy9839 7 ELMGDSSDNHPAC 19 (197)
Q Consensus 7 ~~~~~~~~~~~~~ 19 (197)
-||||+|||-|++
T Consensus 181 AL~GDsSDNIPGV 193 (286)
T PHA00439 181 TIKGDSTDGYSGI 193 (286)
T ss_pred hcccccccCCCCC
Confidence 4899999999987
No 118
>PF07942 N2227: N2227-like protein; InterPro: IPR012901 This family features sequences that are similar to a region of hypothetical yeast gene product N2227 (P53934 from SWISSPROT). This is thought to be expressed during meiosis and may be involved in the defence response to stressful conditions [].
Probab=24.34 E-value=61 Score=29.11 Aligned_cols=64 Identities=13% Similarity=0.236 Sum_probs=41.8
Q ss_pred CCCccchhcccCCc--ceeecccccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccc------cccchhh
Q psy9839 98 EMPLSHYFIASSHN--TYLTGHQLKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAV------MDRIASF 169 (197)
Q Consensus 98 ~~PLshYFIsSSHN--TYL~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~------ts~I~~~ 169 (197)
+-=++.|||.+.+| .|| +...+.| +-++ +|.. -| |..||-... .=.++..
T Consensus 167 d~VvT~FFIDTA~Ni~~Yi-----------~tI~~lL-kpgG-----~WIN-~G----PLlyh~~~~~~~~~~sveLs~e 224 (270)
T PF07942_consen 167 DVVVTCFFIDTAENIIEYI-----------ETIEHLL-KPGG-----YWIN-FG----PLLYHFEPMSIPNEMSVELSLE 224 (270)
T ss_pred cEEEEEEEeechHHHHHHH-----------HHHHHHh-ccCC-----EEEe-cC----CccccCCCCCCCCCcccCCCHH
Confidence 33456777777777 232 2222333 4444 6984 36 889998765 2457789
Q ss_pred HHHHHHhhhcChhH
Q psy9839 170 HLHYHQREHDTNPV 183 (197)
Q Consensus 170 ~v~~~Ik~~Af~~v 183 (197)
|+...|++..|..+
T Consensus 225 Ei~~l~~~~GF~~~ 238 (270)
T PF07942_consen 225 EIKELIEKLGFEIE 238 (270)
T ss_pred HHHHHHHHCCCEEE
Confidence 99999999998654
No 119
>PRK09071 hypothetical protein; Validated
Probab=22.61 E-value=1.1e+02 Score=27.99 Aligned_cols=64 Identities=11% Similarity=0.009 Sum_probs=41.7
Q ss_pred ceeecccccCCCc--HHHHHHHHHhcCCCc----cee--eeeCCCCCccc-------------ceeeecc-cccccc-hh
Q psy9839 112 TYLTGHQLKGESS--VDLYSQFISDYNGED----HYF--TRIGPGGLLNL-------------DKIYKTH-AVMDRI-AS 168 (197)
Q Consensus 112 TYL~G~Ql~g~SS--~e~Y~~aL~~g~r~~----e~d--~~~g~~g~ln~-------------p~i~hg~-t~ts~I-~~ 168 (197)
-+|++-.++|++. +.++.+||+.-+.-+ .+| |.+|.++..+. |++.||. .++++- ..
T Consensus 45 AfL~alr~kgeT~eEi~g~~~a~r~~~~~~~~~~~iD~~~gtG~d~~~~~~~~~a~vlA~~G~~V~kHGnr~~ssk~g~s 124 (323)
T PRK09071 45 AFLMLLRVKEETAEELAGFVEAIRERLQAPPLAVDLDWPSYAGKRRHLPWYLLAAKLLAQNGYRVLLHGGGGHTAGRLYT 124 (323)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHhcccCCCCCceecCCcCCCCCCcccHHHHHHHHHHCCCeEEEECCCCCCCCcccH
Confidence 3677777778764 446788888654322 355 67777654332 9999996 455554 37
Q ss_pred hHHHHHH
Q psy9839 169 FHLHYHQ 175 (197)
Q Consensus 169 ~~v~~~I 175 (197)
.||++++
T Consensus 125 aDvLeaL 131 (323)
T PRK09071 125 EQLLEAL 131 (323)
T ss_pred HHHHHHC
Confidence 7887776
No 120
>PRK09482 flap endonuclease-like protein; Provisional
Probab=22.20 E-value=39 Score=30.03 Aligned_cols=13 Identities=38% Similarity=0.435 Sum_probs=11.6
Q ss_pred cccCCCCCCcccc
Q psy9839 7 ELMGDSSDNHPAC 19 (197)
Q Consensus 7 ~~~~~~~~~~~~~ 19 (197)
-||||+|||-|+|
T Consensus 175 aL~GD~sDnIpGV 187 (256)
T PRK09482 175 GLAGISSSKIPGV 187 (256)
T ss_pred HHhCCCccCCCCC
Confidence 3899999999988
No 121
>PTZ00183 centrin; Provisional
Probab=21.93 E-value=3.4e+02 Score=20.34 Aligned_cols=51 Identities=8% Similarity=0.040 Sum_probs=35.5
Q ss_pred CCCCCCCHHHHHHHHHHHcCCc-hHHHHHHHhhhCCCcccccCCCCCHHHHHHHHc
Q psy9839 24 EMCPILYTTGCIELLEYGQLQF-RHGNHRRTQRHEPDSGLRSQHCLSFEGFARYLM 78 (197)
Q Consensus 24 e~~~~l~~~~l~~FL~~eQ~e~-~~~~~~iI~kyep~~~~r~~~~ls~~gF~~fL~ 78 (197)
.....++.++|..+|+...... ...+..++..+..+ ..+.+++++|...+.
T Consensus 29 ~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~----~~g~i~~~eF~~~~~ 80 (158)
T PTZ00183 29 DGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKD----GSGKIDFEEFLDIMT 80 (158)
T ss_pred CCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC----CCCcEeHHHHHHHHH
Confidence 3456788999999998764322 22577777776543 346699999988765
No 122
>PF10223 DUF2181: Uncharacterized conserved protein (DUF2181); InterPro: IPR019356 This is region of approximately 250 residues with no known function.
Probab=21.62 E-value=1.7e+02 Score=25.97 Aligned_cols=54 Identities=9% Similarity=-0.143 Sum_probs=42.1
Q ss_pred cHHHHHHHHHhcCCCcceeeeeCC---CCCcccceeeecccccccchhhHHHHHHhh
Q psy9839 124 SVDLYSQFISDYNGEDHYFTRIGP---GGLLNLDKIYKTHAVMDRIASFHLHYHQRE 177 (197)
Q Consensus 124 S~e~Y~~aL~~g~r~~e~d~~~g~---~g~ln~p~i~hg~t~ts~I~~~~v~~~Ik~ 177 (197)
|-+.-..||......+|.|+--|. .....+|++-|=-...+-+++.+.++.+..
T Consensus 13 sk~~L~~aL~~~~~miEaDV~l~~~~~~~~~~~PIMahPP~~~SdltLee~L~~v~~ 69 (244)
T PF10223_consen 13 SKAELEEALSSDIMMIEADVLLGGLNTGNEDGIPIMAHPPATDSDLTLEEWLDEVLS 69 (244)
T ss_pred CHHHHHHHhCCCCCEEEEEEEeecccCCCCCCCceeeCCCCCCCcCcHHHHHHHHhc
Confidence 444557788888899999996662 234567999997677899999999999874
No 123
>COG0323 MutL DNA mismatch repair enzyme (predicted ATPase) [DNA replication, recombination, and repair]
Probab=21.18 E-value=44 Score=33.35 Aligned_cols=51 Identities=18% Similarity=0.075 Sum_probs=37.7
Q ss_pred HHHHHhcCCCcceeeeeCCCCCc------------ccceeeecccccccchhhHHHHHHhhhcC
Q psy9839 129 SQFISDYNGEDHYFTRIGPGGLL------------NLDKIYKTHAVMDRIASFHLHYHQREHDT 180 (197)
Q Consensus 129 ~~aL~~g~r~~e~d~~~g~~g~l------------n~p~i~hg~t~ts~I~~~~v~~~Ik~~Af 180 (197)
-++|.+|+..|+|++|.|....+ ++|....-|+ ||||.-++=+..|+-+.|
T Consensus 33 ENSlDAGAt~I~I~ve~gG~~~I~V~DNG~Gi~~~Dl~la~~rHa-TSKI~~~~DL~~I~TlGF 95 (638)
T COG0323 33 ENSLDAGATRIDIEVEGGGLKLIRVRDNGSGIDKEDLPLALLRHA-TSKIASLEDLFRIRTLGF 95 (638)
T ss_pred hcccccCCCEEEEEEccCCccEEEEEECCCCCCHHHHHHHHhhhc-cccCCchhHHHHhhccCc
Confidence 35777899999999998654322 2244444333 899999999999999999
No 124
>PRK07394 hypothetical protein; Provisional
Probab=20.74 E-value=1.3e+02 Score=27.73 Aligned_cols=64 Identities=8% Similarity=0.051 Sum_probs=38.7
Q ss_pred eeecccccCCCc--HHHHHHHHHhcCCCcc-------eee--eeCCC--CCccc-------------ceeeecc-ccccc
Q psy9839 113 YLTGHQLKGESS--VDLYSQFISDYNGEDH-------YFT--RIGPG--GLLNL-------------DKIYKTH-AVMDR 165 (197)
Q Consensus 113 YL~G~Ql~g~SS--~e~Y~~aL~~g~r~~e-------~d~--~~g~~--g~ln~-------------p~i~hg~-t~ts~ 165 (197)
+|++-..+|++. +.++++|++.-...+. +|+ |.|.+ +..|+ |++.||. .++++
T Consensus 47 fL~alr~KGET~eEiaG~~~a~~~~~~~~~~~~~~~~~d~~GtggDG~~~t~NiSt~aA~v~A~~Gv~V~kHGnr~~ssk 126 (342)
T PRK07394 47 FLIAHRIKRPTPEELAGMLDTYDELGPKLQSPSNQRPPIVFGMPYDGRSRTAPIYPLTALILAAAGQPVVLHGGDRMPTK 126 (342)
T ss_pred HHHHHHhhCCCHHHHHHHHHHHHHhCCCCCCCCCCCceeEEeCCCCCCCCCcccHHHHHHHHHHCCCeEEEECCCCCCCC
Confidence 566666677754 3467788886333221 233 44332 23444 9999995 56666
Q ss_pred --chhhHHHHHHh
Q psy9839 166 --IASFHLHYHQR 176 (197)
Q Consensus 166 --I~~~~v~~~Ik 176 (197)
|...||+++.-
T Consensus 127 ~GvtsaDvLe~LG 139 (342)
T PRK07394 127 YGVPLVELWQGLG 139 (342)
T ss_pred CCchHHHHHHHCC
Confidence 66888888765
No 125
>COG0547 TrpD Anthranilate phosphoribosyltransferase [Amino acid transport and metabolism]
Probab=20.55 E-value=1.2e+02 Score=28.13 Aligned_cols=77 Identities=17% Similarity=0.177 Sum_probs=49.6
Q ss_pred ceeecccccCCCcHH--HHHHHHHhcCCCc-----c--eeeeeCCCCCc--cc-------------ceeeec-ccccccc
Q psy9839 112 TYLTGHQLKGESSVD--LYSQFISDYNGED-----H--YFTRIGPGGLL--NL-------------DKIYKT-HAVMDRI 166 (197)
Q Consensus 112 TYL~G~Ql~g~SS~e--~Y~~aL~~g~r~~-----e--~d~~~g~~g~l--n~-------------p~i~hg-~t~ts~I 166 (197)
.+|++-.++|+...| ++.+|++..+.-+ . -.||.|-+|.. |+ |++.|| ..++|+.
T Consensus 41 A~L~Alr~Kget~eEi~G~~~am~~~~~~~~~p~~~~vDi~GTGGDg~~T~NiSt~aA~v~A~~Gv~VaKHGnrs~sSks 120 (338)
T COG0547 41 AFLTALRIKGETPEEIAGFAEAMREHAPKLPVPAADPVDIVGTGGDGANTINISTAAAIVAAAAGVPVAKHGNRSVSSKS 120 (338)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHhcccCCCCCCCCCCeecCCCCCCCcccchHHHHHHHHhCCCcEEeECCCCCCCCC
Confidence 366777777776544 6788888744222 1 23688877733 33 999999 5778888
Q ss_pred hhhHHHHHHhhhcChhHHHhHHHhhh
Q psy9839 167 ASFHLHYHQREHDTNPVRETMRQARR 192 (197)
Q Consensus 167 ~~~~v~~~Ik~~Af~~v~~~~~~~~~ 192 (197)
-..||+++.. .++..+..+|+|
T Consensus 121 GsaDvleaLG----v~l~~~~e~~~~ 142 (338)
T COG0547 121 GSADVLEALG----VNLELSPEQAAR 142 (338)
T ss_pred cHHHHHHHcC----CCCCCCHHHHHH
Confidence 8888888753 233344455443
No 126
>COG3246 Uncharacterized conserved protein [Function unknown]
Probab=20.45 E-value=53 Score=30.16 Aligned_cols=53 Identities=17% Similarity=0.009 Sum_probs=40.0
Q ss_pred Cccee--ecccccCCCcHHHHHHHHHhcCCCcceeeeeCCCCCcccceeeecccccccchhhHHHHHHhhh
Q psy9839 110 HNTYL--TGHQLKGESSVDLYSQFISDYNGEDHYFTRIGPGGLLNLDKIYKTHAVMDRIASFHLHYHQREH 178 (197)
Q Consensus 110 HNTYL--~G~Ql~g~SS~e~Y~~aL~~g~r~~e~d~~~g~~g~ln~p~i~hg~t~ts~I~~~~v~~~Ik~~ 178 (197)
+|.|| |-+|+. +.=++|..+|+.-+|+-++ +.+|.. + .++-.+.+|+..||+-
T Consensus 20 ~~PalP~TP~qIA-----~~a~~aa~AGAai~HlHvR-p~dG~p---------t-~d~~~yr~~l~rIr~~ 74 (298)
T COG3246 20 DHPALPVTPDQIA-----SDAIAAAKAGAAILHLHVR-PEDGRP---------T-LDPEAYREVLERIRAA 74 (298)
T ss_pred cCCCCCCCHHHHH-----HHHHHHHhcCcceEEEEec-CCCCCc---------c-cCHHHHHHHHHHHHcc
Confidence 44554 677775 3348899999999999999 667751 2 3667788999999986
No 127
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=20.11 E-value=94 Score=23.58 Aligned_cols=54 Identities=9% Similarity=0.136 Sum_probs=36.2
Q ss_pred cccCCCCCCCCCCHHHHHHHHHHHcCCchHHHHHHHhhhCCCcccccCCCCCHHHHHHHHc
Q psy9839 18 ACVRGQEMCPILYTTGCIELLEYGQLQFRHGNHRRTQRHEPDSGLRSQHCLSFEGFARYLM 78 (197)
Q Consensus 18 ~~~~~~e~~~~l~~~~l~~FL~~eQ~e~~~~~~~iI~kyep~~~~r~~~~ls~~gF~~fL~ 78 (197)
..+...|++..| ..+|-.||.. |+++ ..+..|++.-..+ ..+.+++.+|..++.
T Consensus 22 ~tLsk~Elk~Ll-~~Elp~~l~~-~~d~-~~vd~im~~LD~n----~Dg~vdF~EF~~Lv~ 75 (91)
T cd05024 22 NYLNRDDLQKLM-EKEFSEFLKN-QNDP-MAVDKIMKDLDDC----RDGKVGFQSFFSLIA 75 (91)
T ss_pred CcCCHHHHHHHH-HHHhHHHHcC-CCCH-HHHHHHHHHhCCC----CCCcCcHHHHHHHHH
Confidence 367777777777 4677777775 4333 3577788775332 356799999988864
No 128
>KOG2643|consensus
Probab=20.01 E-value=1.8e+02 Score=28.46 Aligned_cols=50 Identities=18% Similarity=0.153 Sum_probs=31.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHcCCchHHHHHHHhhhCCCcccccCCCCCHHHHHHHHc
Q psy9839 22 GQEMCPILYTTGCIELLEYGQLQFRHGNHRRTQRHEPDSGLRSQHCLSFEGFARYLM 78 (197)
Q Consensus 22 ~~e~~~~l~~~~l~~FL~~eQ~e~~~~~~~iI~kyep~~~~r~~~~ls~~gF~~fL~ 78 (197)
+..++.-|+.++|++|+++-|.|... -=+++|.+.. .+.|+-..|...|+
T Consensus 296 G~rg~~kLs~deF~~F~e~Lq~Eil~---lEF~~~~~~~----~g~Ise~DFA~~lL 345 (489)
T KOG2643|consen 296 GKRGNGKLSIDEFLKFQENLQEEILE---LEFERFDKGD----SGAISEVDFAELLL 345 (489)
T ss_pred ccCCCccccHHHHHHHHHHHHHHHHH---HHHHHhCccc----ccccCHHHHHHHHH
Confidence 45688889999999999999976532 1133443322 13455555555544
Done!