BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy985
(191 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9NFU0|FMR1_DROME Fragile X mental retardation syndrome-related protein 1
OS=Drosophila melanogaster GN=Fmr1 PE=1 SV=1
Length = 684
Score = 179 bits (454), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 121/171 (70%), Gaps = 4/171 (2%)
Query: 19 PES-KFQFSMVRLPPRETINSG---FVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHV 74
PES K+ F VRLPP ET+ F E EVEVF++ + E+CGWW I+KM K + +
Sbjct: 36 PESMKYPFVNVRLPPEETVEVAAPIFEEGMEVEVFTRTNDRETCGWWVGIIKMRKAEIYA 95
Query: 75 VEYLGCQSTFTEIVPPERMRQKNTNPPIDAKTFHKFDIEVPLDVQEFAKMEGAHKDFQKA 134
V Y+G ++++TEI R+R KN+NPPI AKTF++F + VP +++E A+ +G HK+FQ+
Sbjct: 96 VAYIGFETSYTEICELGRLRAKNSNPPITAKTFYQFTLPVPEELREEAQKDGIHKEFQRT 155
Query: 135 IAAAIVRYIPDKGALSVISRDEACQKRASMIKDMHFRNLNQKVVLLKRTED 185
I A + Y D AL VIS+ E QKRASM+KDMHFRNL+QKV+LLKRTE+
Sbjct: 156 IDAGVCNYSRDLDALIVISKFEHTQKRASMLKDMHFRNLSQKVMLLKRTEE 206
>sp|Q80WE1|FMR1_RAT Fragile X mental retardation protein 1 homolog OS=Rattus norvegicus
GN=Fmr1 PE=2 SV=2
Length = 593
Score = 164 bits (414), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 79/169 (46%), Positives = 105/169 (62%)
Query: 17 WQPESKFQFSMVRLPPRETINSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVE 76
WQPE + F VR PP N E+ EVEV+S+A E E C WW V+MIKG+F+V+E
Sbjct: 36 WQPERQIPFHDVRFPPPVGYNKDINESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIE 95
Query: 77 YLGCQSTFTEIVPPERMRQKNTNPPIDAKTFHKFDIEVPLDVQEFAKMEGAHKDFQKAIA 136
Y C +T+ EIV ER+R N N P TFHK +EVP D+++ E AHKDF+KA+
Sbjct: 96 YAACDATYNEIVTIERLRSVNPNKPATKDTFHKIKLEVPEDLRQMCAKESAHKDFKKAVG 155
Query: 137 AAIVRYIPDKGALSVISRDEACQKRASMIKDMHFRNLNQKVVLLKRTED 185
A V Y P+ L ++S +E KRA M+ DMHFR+L K+ L+ R E+
Sbjct: 156 AFSVTYDPENYQLVILSINEVTSKRAHMLIDMHFRSLRTKLSLILRNEE 204
>sp|P35922|FMR1_MOUSE Fragile X mental retardation protein 1 homolog OS=Mus musculus
GN=Fmr1 PE=1 SV=1
Length = 614
Score = 164 bits (414), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 79/169 (46%), Positives = 105/169 (62%)
Query: 17 WQPESKFQFSMVRLPPRETINSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVE 76
WQPE + F VR PP N E+ EVEV+S+A E E C WW V+MIKG+F+V+E
Sbjct: 36 WQPERQIPFHDVRFPPPVGYNKDINESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIE 95
Query: 77 YLGCQSTFTEIVPPERMRQKNTNPPIDAKTFHKFDIEVPLDVQEFAKMEGAHKDFQKAIA 136
Y C +T+ EIV ER+R N N P TFHK +EVP D+++ E AHKDF+KA+
Sbjct: 96 YAACDATYNEIVTIERLRSVNPNKPATKDTFHKIKLEVPEDLRQMCAKESAHKDFKKAVG 155
Query: 137 AAIVRYIPDKGALSVISRDEACQKRASMIKDMHFRNLNQKVVLLKRTED 185
A V Y P+ L ++S +E KRA M+ DMHFR+L K+ L+ R E+
Sbjct: 156 AFSVTYDPENYQLVILSINEVTSKRAHMLIDMHFRSLRTKLSLILRNEE 204
>sp|Q06787|FMR1_HUMAN Fragile X mental retardation protein 1 OS=Homo sapiens GN=FMR1 PE=1
SV=1
Length = 632
Score = 162 bits (409), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 105/169 (62%)
Query: 17 WQPESKFQFSMVRLPPRETINSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVE 76
WQP+ + F VR PP N E+ EVEV+S+A E E C WW V+MIKG+F+V+E
Sbjct: 36 WQPDRQIPFHDVRFPPPVGYNKDINESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIE 95
Query: 77 YLGCQSTFTEIVPPERMRQKNTNPPIDAKTFHKFDIEVPLDVQEFAKMEGAHKDFQKAIA 136
Y C +T+ EIV ER+R N N P TFHK ++VP D+++ E AHKDF+KA+
Sbjct: 96 YAACDATYNEIVTIERLRSVNPNKPATKDTFHKIKLDVPEDLRQMCAKEAAHKDFKKAVG 155
Query: 137 AAIVRYIPDKGALSVISRDEACQKRASMIKDMHFRNLNQKVVLLKRTED 185
A V Y P+ L ++S +E KRA M+ DMHFR+L K+ L+ R E+
Sbjct: 156 AFSVTYDPENYQLVILSINEVTSKRAHMLIDMHFRSLRTKLSLIMRNEE 204
>sp|Q5R9B4|FMR1_PONAB Fragile X mental retardation protein 1 homolog OS=Pongo abelii
GN=FMR1 PE=2 SV=1
Length = 594
Score = 161 bits (408), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 105/169 (62%)
Query: 17 WQPESKFQFSMVRLPPRETINSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVE 76
WQP+ + F VR PP N E+ EVEV+S+A E E C WW V+MIKG+F+V+E
Sbjct: 36 WQPDRQIPFHDVRFPPPVGYNKDINESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIE 95
Query: 77 YLGCQSTFTEIVPPERMRQKNTNPPIDAKTFHKFDIEVPLDVQEFAKMEGAHKDFQKAIA 136
Y C +T+ EIV ER+R N N P TFHK ++VP D+++ E AHKDF+KA+
Sbjct: 96 YAACDATYNEIVTIERLRSVNPNKPATKDTFHKIKLDVPEDLRQMCAKESAHKDFKKAVG 155
Query: 137 AAIVRYIPDKGALSVISRDEACQKRASMIKDMHFRNLNQKVVLLKRTED 185
A V Y P+ L ++S +E KRA M+ DMHFR+L K+ L+ R E+
Sbjct: 156 AFSVTYDPENYQLVILSINEVTSKRAHMLIDMHFRSLRTKLSLIMRNEE 204
>sp|P51114|FXR1_HUMAN Fragile X mental retardation syndrome-related protein 1 OS=Homo
sapiens GN=FXR1 PE=1 SV=3
Length = 621
Score = 157 bits (397), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 73/169 (43%), Positives = 106/169 (62%)
Query: 17 WQPESKFQFSMVRLPPRETINSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVE 76
WQPE + F+ VRLPP I E EVEV+S+A + E CGWW V+M+KG+F+V+E
Sbjct: 36 WQPERQVPFNEVRLPPPPDIKKEISEGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIE 95
Query: 77 YLGCQSTFTEIVPPERMRQKNTNPPIDAKTFHKFDIEVPLDVQEFAKMEGAHKDFQKAIA 136
Y C +T+ EIV ER+R N N + TF K ++VP D++E E AHKDF+KA+
Sbjct: 96 YAACDATYNEIVTFERLRPVNQNKTVKKNTFFKCTVDVPEDLREACANENAHKDFKKAVG 155
Query: 137 AAIVRYIPDKGALSVISRDEACQKRASMIKDMHFRNLNQKVVLLKRTED 185
A + Y P+ L ++S EA KR +++ DMH R++ K++L+ R E+
Sbjct: 156 ACRIFYHPETTQLMILSASEATVKRVNILSDMHLRSIRTKLMLMSRNEE 204
>sp|Q5XI81|FXR1_RAT Fragile X mental retardation syndrome-related protein 1 OS=Rattus
norvegicus GN=Fxr1 PE=2 SV=1
Length = 568
Score = 157 bits (396), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 73/169 (43%), Positives = 106/169 (62%)
Query: 17 WQPESKFQFSMVRLPPRETINSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVE 76
WQPE + F+ VRLPP I E EVEV+S+A + E CGWW V+M+KG+F+V+E
Sbjct: 36 WQPERQVPFNEVRLPPPPDIKKEISEGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIE 95
Query: 77 YLGCQSTFTEIVPPERMRQKNTNPPIDAKTFHKFDIEVPLDVQEFAKMEGAHKDFQKAIA 136
Y C +T+ EIV ER+R N N + TF K ++VP D++E E AHKDF+KA+
Sbjct: 96 YAACDATYNEIVTFERLRPVNQNKTVKKNTFFKCTVDVPEDLREACANENAHKDFKKAVG 155
Query: 137 AAIVRYIPDKGALSVISRDEACQKRASMIKDMHFRNLNQKVVLLKRTED 185
A + Y P+ L ++S EA KR +++ DMH R++ K++L+ R E+
Sbjct: 156 ACRIFYHPETTQLMILSASEATVKRVNILSDMHLRSIRTKLMLMSRNEE 204
>sp|O70523|FXR1_CRIGR Fragile X mental retardation syndrome-related protein 1
OS=Cricetulus griseus GN=FXR1 PE=2 SV=1
Length = 621
Score = 157 bits (396), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 73/169 (43%), Positives = 106/169 (62%)
Query: 17 WQPESKFQFSMVRLPPRETINSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVE 76
WQPE + F+ VRLPP I E EVEV+S+A + E CGWW V+M+KG+F+V+E
Sbjct: 36 WQPERQVPFNEVRLPPPPDIKKEISEGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIE 95
Query: 77 YLGCQSTFTEIVPPERMRQKNTNPPIDAKTFHKFDIEVPLDVQEFAKMEGAHKDFQKAIA 136
Y C +T+ EIV ER+R N N + TF K ++VP D++E E AHKDF+KA+
Sbjct: 96 YAACDATYNEIVTFERLRPVNQNKTVKKNTFFKCTVDVPEDLREACANENAHKDFKKAVG 155
Query: 137 AAIVRYIPDKGALSVISRDEACQKRASMIKDMHFRNLNQKVVLLKRTED 185
A + Y P+ L ++S EA KR +++ DMH R++ K++L+ R E+
Sbjct: 156 ACRIFYHPETTQLMILSASEATVKRVNILSDMHLRSIRTKLMLMSRNEE 204
>sp|Q61584|FXR1_MOUSE Fragile X mental retardation syndrome-related protein 1 OS=Mus
musculus GN=Fxr1 PE=1 SV=2
Length = 677
Score = 157 bits (396), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 73/169 (43%), Positives = 106/169 (62%)
Query: 17 WQPESKFQFSMVRLPPRETINSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVE 76
WQPE + F+ VRLPP I E EVEV+S+A + E CGWW V+M+KG+F+V+E
Sbjct: 36 WQPERQVPFNEVRLPPPPDIKKEISEGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIE 95
Query: 77 YLGCQSTFTEIVPPERMRQKNTNPPIDAKTFHKFDIEVPLDVQEFAKMEGAHKDFQKAIA 136
Y C +T+ EIV ER+R N N + TF K ++VP D++E E AHKDF+KA+
Sbjct: 96 YAACDATYNEIVTFERLRPVNQNKTVKKNTFFKCTVDVPEDLREACANENAHKDFKKAVG 155
Query: 137 AAIVRYIPDKGALSVISRDEACQKRASMIKDMHFRNLNQKVVLLKRTED 185
A + Y P+ L ++S EA KR +++ DMH R++ K++L+ R E+
Sbjct: 156 ACRIFYHPETTQLMILSASEATVKRVNILSDMHLRSIRTKLMLMSRNEE 204
>sp|P51113|FMR1A_XENLA Fragile X mental retardation protein 1 homolog A OS=Xenopus laevis
GN=fmr1-a PE=1 SV=1
Length = 564
Score = 156 bits (395), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 75/169 (44%), Positives = 103/169 (60%)
Query: 17 WQPESKFQFSMVRLPPRETINSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVE 76
WQ E + F VR PP N E EVEV+S+A E E C WW V+MIKG+F+V+E
Sbjct: 36 WQQERQIPFHDVRFPPPSGYNKDINERDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIE 95
Query: 77 YLGCQSTFTEIVPPERMRQKNTNPPIDAKTFHKFDIEVPLDVQEFAKMEGAHKDFQKAIA 136
Y C +T+ EIV ER+R N N P +FHK ++VP D+++ + AHKDF+KA+
Sbjct: 96 YAACDATYNEIVTIERLRSVNPNKPATKSSFHKVKLDVPEDLRQMCAKDSAHKDFKKAVG 155
Query: 137 AAIVRYIPDKGALSVISRDEACQKRASMIKDMHFRNLNQKVVLLKRTED 185
A V Y + L ++S +E KRASM+ DMHFR+L K+ L+ R E+
Sbjct: 156 AFSVSYDSENYQLVILSVNEVSIKRASMLSDMHFRSLRTKLSLMLRNEE 204
>sp|Q2TBT7|FXR1_BOVIN Fragile X mental retardation syndrome-related protein 1 OS=Bos
taurus GN=FXR1 PE=2 SV=1
Length = 621
Score = 156 bits (394), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 106/169 (62%)
Query: 17 WQPESKFQFSMVRLPPRETINSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVE 76
WQPE + F+ VRLPP I E EVEV+S+A + E CGWW V+M+KG+F+V+E
Sbjct: 36 WQPERQVPFNEVRLPPPPDIKKEISEGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIE 95
Query: 77 YLGCQSTFTEIVPPERMRQKNTNPPIDAKTFHKFDIEVPLDVQEFAKMEGAHKDFQKAIA 136
Y C +T+ EIV ER+R N N + TF K ++VP D++E E AHKD++KA+
Sbjct: 96 YAACDATYNEIVTFERLRPVNQNKTVKKNTFFKCTVDVPEDLREACANENAHKDYKKAVG 155
Query: 137 AAIVRYIPDKGALSVISRDEACQKRASMIKDMHFRNLNQKVVLLKRTED 185
A + Y P+ L ++S EA KR +++ DMH R++ K++L+ R E+
Sbjct: 156 ACRIFYHPETTQLMILSASEATVKRVNILSDMHLRSIRTKLMLMSRNEE 204
>sp|Q6GLC9|FMR1_XENTR Fragile X mental retardation protein 1 homolog OS=Xenopus
tropicalis GN=fmr1 PE=2 SV=1
Length = 590
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 104/169 (61%)
Query: 17 WQPESKFQFSMVRLPPRETINSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVE 76
WQ E + F VR PP N E+ EVEV+S+A E E C WW V+MIKG+F+V+E
Sbjct: 36 WQQERQIPFHDVRFPPPSGYNKDINESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIE 95
Query: 77 YLGCQSTFTEIVPPERMRQKNTNPPIDAKTFHKFDIEVPLDVQEFAKMEGAHKDFQKAIA 136
Y C +T+ EIV ER+R N N P +FHK ++VP D+++ + AHKDF+KA+
Sbjct: 96 YAACDATYNEIVTIERLRSVNPNKPATKNSFHKVKLDVPEDLRQMCAKDSAHKDFKKAVG 155
Query: 137 AAIVRYIPDKGALSVISRDEACQKRASMIKDMHFRNLNQKVVLLKRTED 185
A V Y + L ++S +E KRA+M+ DMHFR+L K+ L+ R E+
Sbjct: 156 AFSVSYDSENYQLVILSVNEVTIKRANMLSDMHFRSLRTKLSLMLRNEE 204
>sp|P51116|FXR2_HUMAN Fragile X mental retardation syndrome-related protein 2 OS=Homo
sapiens GN=FXR2 PE=1 SV=2
Length = 673
Score = 150 bits (380), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 101/169 (59%)
Query: 17 WQPESKFQFSMVRLPPRETINSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVE 76
WQ E + F VRLPP N E EVEV+S+A E E CGWW V+M+KGDF+V+E
Sbjct: 46 WQSERQIPFGDVRLPPPADYNKEITEGDEVEVYSRANEQEPCGWWLARVRMMKGDFYVIE 105
Query: 77 YLGCQSTFTEIVPPERMRQKNTNPPIDAKTFHKFDIEVPLDVQEFAKMEGAHKDFQKAIA 136
Y C +T+ EIV ER+R N NP +F K + VP D++E E HK+F+KA+
Sbjct: 106 YAACDATYNEIVTLERLRPVNPNPLATKGSFFKVTMAVPEDLREACSNENVHKEFKKALG 165
Query: 137 AAIVRYIPDKGALSVISRDEACQKRASMIKDMHFRNLNQKVVLLKRTED 185
A + L ++S EA KRAS++ DMHFR+L K++L+ R E+
Sbjct: 166 ANCIFLNITNSELFILSTTEAPVKRASLLGDMHFRSLRTKLLLMSRNEE 214
>sp|Q2KHP9|FMR1B_XENLA Fragile X mental retardation protein 1 homolog B OS=Xenopus laevis
GN=fmr1-b PE=2 SV=1
Length = 564
Score = 150 bits (379), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 103/169 (60%)
Query: 17 WQPESKFQFSMVRLPPRETINSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVE 76
WQ E + F VR PP N E+ EVEV+S+A E E C WW V+MIKG+F+V+E
Sbjct: 36 WQQEKQIPFHDVRFPPPSGYNKDINESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIE 95
Query: 77 YLGCQSTFTEIVPPERMRQKNTNPPIDAKTFHKFDIEVPLDVQEFAKMEGAHKDFQKAIA 136
Y C +T+ EIV +R+R N N +FHK ++VP D+++ + AHKDF+KA+
Sbjct: 96 YAACDATYNEIVTIDRLRSVNPNKSATKNSFHKVKLDVPEDLRQMCAKDSAHKDFKKAVG 155
Query: 137 AAIVRYIPDKGALSVISRDEACQKRASMIKDMHFRNLNQKVVLLKRTED 185
A V Y + L ++S +E KRA+M+ DMHFR+L K+ L+ R E+
Sbjct: 156 AFSVSYDSENYQLVILSVNEVTIKRANMLCDMHFRSLRTKLSLMLRNEE 204
>sp|Q7ZTQ5|FXR1B_XENLA Fragile X mental retardation syndrome-related protein 1 homolog B
OS=Xenopus laevis GN=fxr1-b PE=2 SV=1
Length = 675
Score = 147 bits (370), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 104/169 (61%)
Query: 17 WQPESKFQFSMVRLPPRETINSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVE 76
WQPE + F+ VR+PP I E EVEV+S+A + E CGWW V+M+KG+F+V+E
Sbjct: 36 WQPERQVPFNEVRMPPLPDIKKEITEGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIE 95
Query: 77 YLGCQSTFTEIVPPERMRQKNTNPPIDAKTFHKFDIEVPLDVQEFAKMEGAHKDFQKAIA 136
Y C +T+ EIV ER+R N N + +F K ++VP D++E E HK+F+KA+
Sbjct: 96 YAACDATYNEIVTFERLRPVNQNKSVTKNSFFKCTVDVPEDLRESCSNENVHKEFKKAVG 155
Query: 137 AAIVRYIPDKGALSVISRDEACQKRASMIKDMHFRNLNQKVVLLKRTED 185
A V + + L ++S E+ KR +++ DMH R++ K++L+ R E+
Sbjct: 156 ACRVYFHAETNQLIILSASESTVKRVNILSDMHLRSIRTKLMLMSRNEE 204
>sp|P51115|FXR1A_XENLA Fragile X mental retardation syndrome-related protein 1 homolog A
OS=Xenopus laevis GN=fxr1-a PE=1 SV=2
Length = 676
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 103/169 (60%)
Query: 17 WQPESKFQFSMVRLPPRETINSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVE 76
WQPE + F VR+PP I E EVEV+S+A + E CGWW V+M+KG+F+V+E
Sbjct: 36 WQPERQVPFDEVRMPPLPDIKKEITEGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIE 95
Query: 77 YLGCQSTFTEIVPPERMRQKNTNPPIDAKTFHKFDIEVPLDVQEFAKMEGAHKDFQKAIA 136
Y C +T+ EIV ER+R N N + +F K ++VP D++E E HK+F+KA+
Sbjct: 96 YAACDATYNEIVTFERLRPVNQNKTVTKNSFFKCTVDVPEDLRESCSNENVHKEFKKAVG 155
Query: 137 AAIVRYIPDKGALSVISRDEACQKRASMIKDMHFRNLNQKVVLLKRTED 185
A V + + L ++S E+ KR +++ DMH R++ K++L+ R E+
Sbjct: 156 ACRVYFHAETNQLIILSACESTVKRVNILSDMHLRSIRTKLMLMSRNEE 204
>sp|Q5BJ56|FXR1_XENTR Fragile X mental retardation syndrome-related protein 1 homolog
OS=Xenopus tropicalis GN=fxr1 PE=2 SV=2
Length = 674
Score = 145 bits (366), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 103/169 (60%)
Query: 17 WQPESKFQFSMVRLPPRETINSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVE 76
WQPE + F VR+PP I E EVEV+S+A + E CGWW V+M+KG+F+V+E
Sbjct: 36 WQPERQVPFHEVRMPPLPDIKKEITEGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIE 95
Query: 77 YLGCQSTFTEIVPPERMRQKNTNPPIDAKTFHKFDIEVPLDVQEFAKMEGAHKDFQKAIA 136
Y C +T+ EIV ER+R N N + +F K ++VP D++E E HK+F+KA+
Sbjct: 96 YAACDATYNEIVTFERLRPGNQNKSVTKSSFFKCTVDVPEDLREPCSNENVHKEFKKAVG 155
Query: 137 AAIVRYIPDKGALSVISRDEACQKRASMIKDMHFRNLNQKVVLLKRTED 185
A V + + L ++S E+ KR +++ DMH R++ K++L+ R E+
Sbjct: 156 ACRVYFHAETNQLIILSACESTVKRVTILSDMHLRSIRTKLMLMSRNEE 204
>sp|Q9WVR4|FXR2_MOUSE Fragile X mental retardation syndrome-related protein 2 OS=Mus
musculus GN=Fxr2 PE=1 SV=1
Length = 673
Score = 141 bits (355), Expect = 3e-33, Method: Composition-based stats.
Identities = 71/169 (42%), Positives = 100/169 (59%)
Query: 17 WQPESKFQFSMVRLPPRETINSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVE 76
WQ E + F VRLPP N E EVEV+S+A E E CGW V+M+KGDF+V+E
Sbjct: 46 WQSERQIPFGDVRLPPPADYNKEITEGDEVEVYSRANEQEPCGWCLARVRMMKGDFYVIE 105
Query: 77 YLGCQSTFTEIVPPERMRQKNTNPPIDAKTFHKFDIEVPLDVQEFAKMEGAHKDFQKAIA 136
Y C +T+ EIV ER+R N++ +F K + VP D++E E HK+F+KA+
Sbjct: 106 YAACDATYNEIVTLERLRPVNSSSLATKGSFFKVTMAVPEDLREACSNENVHKEFKKALG 165
Query: 137 AAIVRYIPDKGALSVISRDEACQKRASMIKDMHFRNLNQKVVLLKRTED 185
A + L ++S EA KRAS++ DMHFR+L K++L+ R E+
Sbjct: 166 ANCIFLNITNSELFILSTTEAPVKRASLLGDMHFRSLRTKLLLMSRNEE 214
>sp|Q8RE57|SYM_FUSNN Methionine--tRNA ligase OS=Fusobacterium nucleatum subsp. nucleatum
(strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131)
GN=metG PE=3 SV=1
Length = 636
Score = 30.4 bits (67), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 32/54 (59%), Gaps = 10/54 (18%)
Query: 101 PIDAKTFHKFDIEVPLDVQEFAKMEGAHK---------DFQKAIAAAIVRYIPD 145
P+D K F+K +I+V +++ + K+EGA K +F++ I + + ++ PD
Sbjct: 530 PVDIKEFNKIEIKV-VEILDVDKVEGADKLLKFKVFDGEFERQIISGLAKFYPD 582
>sp|O67810|HSLO_AQUAE 33 kDa chaperonin OS=Aquifex aeolicus (strain VF5) GN=hslO PE=3
SV=1
Length = 325
Score = 30.0 bits (66), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 39 GFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGCQSTFTEIVP 89
GFV N V+ ++K EG+ + V + KG VV+ LG +T +VP
Sbjct: 109 GFVGNPNVDTYTKEVEGKK--KFDVAKIVGKGTLTVVKDLGMGKPYTSVVP 157
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,382,167
Number of Sequences: 539616
Number of extensions: 2570859
Number of successful extensions: 5118
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 5098
Number of HSP's gapped (non-prelim): 24
length of query: 191
length of database: 191,569,459
effective HSP length: 111
effective length of query: 80
effective length of database: 131,672,083
effective search space: 10533766640
effective search space used: 10533766640
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)