Query psy985
Match_columns 191
No_of_seqs 72 out of 74
Neff 4.8
Searched_HMMs 29240
Date Fri Aug 16 21:16:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy985.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/985hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3h8z_A FragIle X mental retard 100.0 4.3E-44 1.5E-48 282.6 9.7 100 7-107 29-128 (128)
2 3sd4_A PHD finger protein 20; 98.2 6.4E-06 2.2E-10 57.5 7.6 60 32-96 5-68 (69)
3 2eqm_A PHD finger protein 20-l 98.0 2E-05 6.7E-10 58.0 8.2 58 36-98 16-77 (88)
4 2f5k_A MORF-related gene 15 is 98.0 1E-05 3.5E-10 61.2 6.1 60 32-97 15-78 (102)
5 3m9q_A Protein MALE-specific l 97.7 8.7E-05 3E-09 56.1 7.0 61 36-97 16-85 (101)
6 2lcc_A AT-rich interactive dom 97.6 0.00011 3.8E-09 52.6 6.2 58 38-97 4-65 (76)
7 3m9p_A MALE-specific lethal 3 97.6 0.00013 4.3E-09 56.0 6.6 64 33-97 13-85 (110)
8 3oa6_A MALE-specific lethal 3 97.4 0.00038 1.3E-08 53.3 6.4 66 31-97 11-85 (110)
9 2k3y_A Chromatin modification- 97.3 0.0003 1E-08 55.7 5.7 55 37-97 7-103 (136)
10 2lrq_A Protein MRG15, NUA4 com 96.4 3.3E-05 1.1E-09 56.5 0.0 57 36-98 9-69 (85)
11 1mhn_A SurviVal motor neuron p 97.3 0.00087 3E-08 45.0 6.8 55 38-98 2-58 (59)
12 1wgs_A MYST histone acetyltran 97.3 0.00088 3E-08 52.5 7.8 57 36-97 9-71 (133)
13 4a4f_A SurviVal of motor neuro 97.3 0.00088 3E-08 45.8 6.8 55 37-97 6-62 (64)
14 2eko_A Histone acetyltransfera 97.2 0.0014 4.7E-08 48.2 7.4 61 36-97 6-70 (87)
15 2rnz_A Histone acetyltransfera 97.0 0.0032 1.1E-07 46.9 8.1 63 29-97 13-81 (94)
16 1g5v_A SurviVal motor neuron p 97.0 0.002 6.8E-08 47.2 6.8 56 38-99 9-66 (88)
17 2equ_A PHD finger protein 20-l 96.8 0.0025 8.6E-08 45.3 6.0 55 37-99 7-62 (74)
18 3s6w_A Tudor domain-containing 96.8 0.0029 9.9E-08 41.6 5.5 51 40-96 2-54 (54)
19 2d9t_A Tudor domain-containing 96.7 0.004 1.4E-07 44.2 6.6 57 37-99 7-65 (78)
20 1wjq_A KIAA1798 protein; MBT d 96.7 0.0053 1.8E-07 46.6 7.4 57 38-97 12-70 (107)
21 3pnw_C Tudor domain-containing 96.6 0.005 1.7E-07 43.7 6.3 57 37-99 15-73 (77)
22 2ro0_A Histone acetyltransfera 96.5 0.0055 1.9E-07 45.3 6.2 55 36-96 20-78 (92)
23 2biv_A SCML2 protein, sex COMB 96.2 0.012 3.9E-07 50.2 7.5 58 37-97 60-119 (243)
24 2r58_A Polycomb protein SCM; M 96.2 0.013 4.3E-07 50.7 7.4 58 37-97 32-91 (265)
25 2r58_A Polycomb protein SCM; M 96.1 0.022 7.6E-07 49.2 8.5 57 38-97 142-200 (265)
26 3qii_A PHD finger protein 20; 96.0 0.015 5E-07 42.7 5.9 57 37-101 19-76 (85)
27 2wac_A CG7008-PA; unknown func 96.0 0.14 4.9E-06 40.8 12.4 144 37-190 49-209 (218)
28 3p8d_A Medulloblastoma antigen 95.9 0.021 7.2E-07 40.0 6.1 57 38-102 5-62 (67)
29 2biv_A SCML2 protein, sex COMB 95.7 0.036 1.2E-06 47.2 8.1 51 38-91 170-220 (243)
30 2eqk_A Tudor domain-containing 95.7 0.026 8.8E-07 41.4 6.1 58 37-99 19-76 (85)
31 3fdr_A Tudor and KH domain-con 95.6 0.027 9.2E-07 40.4 6.1 57 37-99 25-82 (94)
32 2i0n_A Class VII unconventiona 95.0 0.054 1.9E-06 37.5 5.9 44 36-91 25-69 (80)
33 2cub_A Cytoplasmic protein NCK 94.9 0.053 1.8E-06 38.3 5.7 51 35-98 31-82 (88)
34 1oz2_A Lethal(3)malignant brai 94.7 0.12 4.1E-06 45.7 8.6 58 37-97 146-205 (331)
35 2ldm_A Uncharacterized protein 93.7 0.0056 1.9E-07 44.4 0.0 53 38-98 5-58 (81)
36 2yup_A Vinexin; sorbin and SH3 94.6 0.033 1.1E-06 39.4 4.0 55 36-102 32-88 (90)
37 3ut1_A Lethal(3)malignant brai 94.5 0.089 3E-06 46.5 7.3 59 25-88 24-82 (324)
38 2diq_A Tudor and KH domain-con 94.5 0.036 1.2E-06 40.9 4.0 55 38-98 31-86 (110)
39 2lj0_A Sorbin and SH3 domain-c 94.4 0.058 2E-06 36.7 4.7 27 36-66 21-47 (65)
40 3h8z_A FragIle X mental retard 94.4 0.07 2.4E-06 41.5 5.7 52 41-99 3-55 (128)
41 1y0m_A 1-phosphatidylinositol- 94.4 0.048 1.7E-06 35.5 4.1 29 36-68 18-46 (61)
42 1tg0_A BBC1 protein, myosin ta 94.3 0.085 2.9E-06 35.1 5.2 28 36-67 22-49 (68)
43 2ysq_A RHO guanine nucleotide 94.2 0.079 2.7E-06 36.6 5.1 27 36-66 25-51 (81)
44 2bud_A Males-absent on the fir 94.1 0.16 5.4E-06 37.6 6.7 51 43-98 18-75 (92)
45 2yuo_A CIP85, RUN and TBC1 dom 94.0 0.14 4.9E-06 34.9 6.1 42 36-90 22-64 (78)
46 1wjr_A KIAA1617 protein; MBT d 94.0 0.059 2E-06 41.7 4.5 57 38-97 10-70 (127)
47 3bdl_A Staphylococcal nuclease 93.9 0.56 1.9E-05 43.5 11.7 143 37-189 409-569 (570)
48 2ekh_A SH3 and PX domain-conta 93.9 0.17 5.8E-06 34.9 6.3 26 36-65 23-48 (80)
49 3ntk_A Maternal protein tudor; 93.9 0.4 1.4E-05 37.7 9.3 104 38-155 46-158 (169)
50 2dbk_A CRK-like protein; struc 93.8 0.096 3.3E-06 36.8 5.0 46 36-94 33-79 (88)
51 1uti_A GRB2-related adaptor pr 93.8 0.078 2.7E-06 34.1 4.2 26 36-65 16-41 (58)
52 2csi_A RIM-BP2, RIM binding pr 93.8 0.059 2E-06 36.9 3.7 28 35-65 28-55 (76)
53 1ue9_A Intersectin 2; beta bar 93.6 0.17 5.8E-06 34.6 5.9 27 36-66 22-48 (80)
54 1wxu_A Peroxisomal biogenesis 93.6 0.057 1.9E-06 38.4 3.5 54 36-97 32-86 (93)
55 2dmo_A Neutrophil cytosol fact 93.5 0.091 3.1E-06 35.1 4.3 26 36-65 22-47 (68)
56 2bzy_A CRK-like protein, CRKL 93.5 0.079 2.7E-06 35.3 3.9 27 36-66 18-44 (67)
57 1oz2_A Lethal(3)malignant brai 93.5 0.14 4.9E-06 45.2 6.6 52 38-92 251-302 (331)
58 2yun_A Nostrin; nitric oxide s 93.4 0.16 5.6E-06 34.7 5.6 49 36-97 22-71 (79)
59 2pqh_A Spectrin alpha chain, b 93.4 0.11 3.8E-06 35.8 4.7 26 36-65 17-42 (80)
60 1x2q_A Signal transducing adap 93.4 0.22 7.4E-06 34.9 6.2 27 36-66 32-58 (88)
61 1jo8_A ABP1P, actin binding pr 93.4 0.083 2.9E-06 34.0 3.7 27 36-66 15-41 (58)
62 1wx6_A Cytoplasmic protein NCK 93.3 0.087 3E-06 37.1 4.0 57 36-102 32-89 (91)
63 1w70_A Neutrophil cytosol fact 93.3 0.11 3.7E-06 33.8 4.2 26 36-65 19-44 (60)
64 2oaw_A Spectrin alpha chain, b 93.2 0.2 6.7E-06 32.6 5.5 27 36-66 16-42 (65)
65 1neg_A Spectrin alpha chain, b 93.2 0.13 4.5E-06 36.3 4.8 25 36-64 32-56 (83)
66 2csq_A RIM-BP2, RIM binding pr 93.1 0.14 4.7E-06 36.7 5.0 47 36-94 40-87 (97)
67 2lx7_A GAS-7, growth arrest-sp 93.1 0.061 2.1E-06 36.2 2.8 25 37-65 20-44 (60)
68 1k4u_S Phagocyte NADPH oxidase 93.0 0.074 2.5E-06 34.7 3.1 26 36-65 20-45 (62)
69 1ruw_A Myosin-3 isoform, MYO3; 93.0 0.15 5.1E-06 33.9 4.7 29 34-66 16-44 (69)
70 2ew3_A SH3-containing GRB2-lik 92.9 0.11 3.8E-06 35.0 4.0 26 36-65 18-43 (68)
71 2gnc_A SLIT-ROBO RHO GTPase-ac 92.8 0.088 3E-06 34.2 3.2 26 36-65 21-46 (60)
72 1uj0_A Signal transducing adap 92.8 0.12 4E-06 33.8 3.9 27 36-66 20-46 (62)
73 3ut1_A Lethal(3)malignant brai 92.7 0.29 9.9E-06 43.2 7.4 52 38-92 246-297 (324)
74 3ulr_B SRC substrate cortactin 92.7 0.12 4.2E-06 33.7 3.9 26 36-65 24-49 (65)
75 2o9s_A Ponsin; SH3 domain, sig 92.7 0.14 4.8E-06 33.9 4.2 28 36-67 21-48 (67)
76 2dl8_A SLIT-ROBO RHO GTPase-ac 92.6 0.15 5.1E-06 34.4 4.3 26 36-65 24-49 (72)
77 1nm7_A Peroxisomal membrane pr 92.6 0.12 4.2E-06 35.4 3.9 29 37-65 24-53 (69)
78 1cka_A C-CRK N-terminal SH3 do 92.6 0.16 5.6E-06 32.4 4.3 25 36-64 16-40 (57)
79 3o5z_A Phosphatidylinositol 3- 92.5 0.035 1.2E-06 39.5 1.0 49 36-92 26-87 (90)
80 1g2b_A Spectrin alpha chain; c 92.5 0.18 6.3E-06 32.9 4.5 26 36-65 36-61 (62)
81 2eyx_A V-CRK sarcoma virus CT1 92.5 0.11 3.8E-06 34.6 3.4 27 36-66 23-49 (67)
82 3e9g_A Chromatin modification- 92.4 0.35 1.2E-05 37.9 6.7 55 37-97 5-101 (130)
83 2j6f_A CD2-associated protein; 92.4 0.18 6.1E-06 32.9 4.4 27 36-65 16-42 (62)
84 1zx6_A YPR154WP; SH3 domain, p 92.4 0.14 4.6E-06 33.0 3.7 26 36-65 17-42 (58)
85 2bz8_A SH3-domain kinase bindi 92.4 0.13 4.5E-06 33.1 3.6 26 36-65 16-41 (58)
86 1w1f_A Tyrosine-protein kinase 92.3 0.23 7.9E-06 32.4 4.8 25 36-65 22-46 (65)
87 1zuu_A BZZ1 protein; SH3 domai 92.2 0.21 7E-06 31.9 4.4 27 36-65 16-42 (58)
88 2a28_A BZZ1 protein; SH3 domai 92.2 0.17 5.9E-06 32.0 4.0 27 36-65 15-41 (54)
89 1b07_A Protein (proto-oncogene 92.1 0.19 6.6E-06 33.4 4.3 25 36-64 18-42 (65)
90 2j05_A RAS GTPase-activating p 92.1 0.22 7.4E-06 32.8 4.5 26 36-65 21-46 (65)
91 1uhc_A KIAA1010 protein; beta 92.1 0.12 4.2E-06 35.4 3.4 29 36-64 28-56 (79)
92 2eqi_A Phospholipase C, gamma 92.0 0.13 4.4E-06 34.3 3.3 27 36-66 22-48 (69)
93 2g6f_X RHO guanine nucleotide 92.0 0.18 6.1E-06 32.5 3.9 26 36-65 19-44 (59)
94 1zuy_A Myosin-5 isoform; SH3 d 92.0 0.17 5.9E-06 32.3 3.8 28 35-66 15-42 (58)
95 3feo_A MBT domain-containing p 91.9 0.33 1.1E-05 44.4 7.0 54 25-81 31-84 (437)
96 1wie_A RIM binding protein 2; 91.9 0.25 8.4E-06 35.4 4.9 50 36-96 38-88 (96)
97 1oot_A Hypothetical 40.4 kDa p 91.8 0.2 6.9E-06 32.3 4.0 28 36-65 18-45 (60)
98 2gfu_A DNA mismatch repair pro 91.8 0.19 6.7E-06 38.5 4.6 58 36-99 19-87 (134)
99 2dl3_A Sorbin and SH3 domain-c 91.8 0.13 4.4E-06 34.1 3.1 26 36-65 22-47 (68)
100 2daq_A WHSC1L1 protein, isofor 91.8 0.2 6.7E-06 37.0 4.4 57 37-100 6-74 (110)
101 2lcs_A NAP1-binding protein 2; 91.8 0.18 6.3E-06 34.3 4.0 27 36-66 20-46 (73)
102 2ebp_A SAM and SH3 domain-cont 91.8 0.18 6.2E-06 34.3 3.9 27 35-65 25-51 (73)
103 2hqx_A P100 CO-activator tudor 91.8 0.44 1.5E-05 39.1 7.0 74 37-117 63-142 (246)
104 4glm_A Dynamin-binding protein 91.7 0.19 6.5E-06 33.3 3.9 26 36-65 28-53 (72)
105 3u23_A CD2-associated protein; 91.7 0.15 5E-06 33.2 3.2 26 36-65 22-47 (65)
106 2epd_A RHO GTPase-activating p 91.6 0.16 5.5E-06 34.6 3.5 26 36-65 25-50 (76)
107 2dl7_A KIAA0769 protein; SH3 d 91.6 0.33 1.1E-05 32.6 5.1 29 36-65 23-51 (73)
108 4e6r_A Cytoplasmic protein NCK 91.6 0.21 7.2E-06 31.7 3.9 26 35-64 15-40 (58)
109 2fpe_A C-JUN-amino-terminal ki 91.6 0.26 8.9E-06 32.0 4.4 25 36-64 18-42 (62)
110 2nwm_A Vinexin; cell adhesion; 91.5 0.19 6.3E-06 33.6 3.7 26 36-65 16-41 (65)
111 2kbt_A Chimera of proto-oncoge 91.5 0.27 9.1E-06 38.0 5.0 45 36-92 20-65 (142)
112 1sem_A SEM-5; SRC-homology 3 ( 91.4 0.21 7.2E-06 31.9 3.8 26 36-65 17-42 (58)
113 2x3w_D Syndapin I, protein kin 91.4 0.11 3.9E-06 33.4 2.5 28 36-66 18-45 (60)
114 3cqt_A P59-FYN, proto-oncogene 91.4 0.21 7.3E-06 34.5 4.0 26 36-65 20-45 (79)
115 2dl4_A Protein STAC; SH3 domai 91.4 0.15 5.2E-06 34.0 3.1 26 36-65 22-47 (68)
116 2ct4_A CDC42-interacting prote 91.4 0.31 1.1E-05 32.4 4.7 28 36-66 22-49 (70)
117 1x69_A Cortactin isoform A; SH 91.4 0.2 7E-06 34.3 3.9 26 36-65 32-57 (79)
118 2ke9_A Caskin-2; SH3 domain, A 91.3 0.16 5.6E-06 35.6 3.4 27 36-66 34-60 (83)
119 4f14_A Nebulette; SH3 domain, 91.3 0.34 1.2E-05 31.3 4.7 26 36-65 21-46 (64)
120 2iim_A Proto-oncogene tyrosine 91.2 0.28 9.4E-06 31.9 4.3 25 36-65 21-45 (62)
121 2xmf_A Myosin 1E SH3; motor pr 91.2 0.24 8.2E-06 32.0 3.9 26 36-65 20-45 (60)
122 1x6g_A Megakaryocyte-associate 91.1 0.31 1.1E-05 33.7 4.7 27 36-65 32-58 (81)
123 1uff_A Intersectin 2; beta bar 91.1 0.45 1.5E-05 33.6 5.6 47 36-93 20-67 (93)
124 3ngp_A Spectrin alpha chain, b 91.1 0.24 8.2E-06 31.9 3.8 27 35-65 20-46 (62)
125 1zlm_A Osteoclast stimulating 91.1 0.24 8.2E-06 31.8 3.8 26 36-65 18-43 (58)
126 1gl5_A Tyrosine-protein kinase 91.0 0.29 9.9E-06 32.4 4.3 25 36-64 17-41 (67)
127 2djq_A SH3 domain containing r 90.9 0.25 8.5E-06 32.7 3.9 26 36-65 22-47 (68)
128 1s1n_A Nephrocystin 1; beta ba 90.9 0.19 6.6E-06 33.2 3.3 26 36-65 25-50 (68)
129 2ed0_A ABL interactor 2; coile 90.9 0.25 8.4E-06 33.8 3.9 26 36-65 32-57 (78)
130 2fei_A CD2-associated protein; 90.9 0.087 3E-06 35.3 1.5 26 36-65 16-41 (65)
131 2vwf_A Growth factor receptor- 90.9 0.24 8.1E-06 31.6 3.6 26 36-65 17-42 (58)
132 2ege_A Uncharacterized protein 90.8 0.2 6.7E-06 34.2 3.4 27 36-65 29-55 (75)
133 2jte_A CD2-associated protein; 90.8 0.27 9.4E-06 32.0 3.9 28 36-65 21-48 (64)
134 1v1c_A Obscurin; muscle, sarco 90.7 0.2 6.8E-06 35.5 3.3 28 36-67 22-49 (71)
135 2drm_A Acanthamoeba myosin IB; 90.7 0.26 8.8E-06 31.5 3.7 26 36-65 18-43 (58)
136 1j3t_A Intersectin 2; beta bar 90.7 0.26 9E-06 33.3 3.9 25 36-65 25-49 (74)
137 3c0c_A Endophilin-A2; endocyto 90.6 0.25 8.4E-06 33.3 3.7 26 36-65 28-53 (73)
138 3h0h_A Proto-oncogene tyrosine 90.6 0.36 1.2E-05 32.2 4.5 26 36-65 30-55 (73)
139 2fpf_A C-JUN-amino-terminal ki 90.6 0.34 1.2E-05 32.3 4.4 25 36-64 21-45 (71)
140 4fu6_A PC4 and SFRS1-interacti 90.6 0.15 5E-06 40.0 2.8 54 36-96 19-79 (153)
141 2l0a_A STAM-1, signal transduc 90.6 0.14 4.7E-06 35.2 2.4 26 36-65 32-57 (72)
142 2ak5_A RHO guanine nucleotide 90.6 0.29 9.8E-06 31.9 3.8 26 36-65 21-46 (64)
143 2dlp_A KIAA1783 protein; SH3 d 90.5 0.28 9.5E-06 34.1 3.9 29 36-66 23-51 (85)
144 2cuc_A SH3 domain containing r 90.4 0.28 9.7E-06 32.4 3.8 25 36-64 22-46 (70)
145 2dbm_A SH3-containing GRB2-lik 90.4 0.18 6.2E-06 34.0 2.8 26 36-65 22-47 (73)
146 1u5s_A Cytoplasmic protein NCK 90.3 0.27 9.2E-06 32.7 3.6 27 36-64 21-47 (71)
147 2v1r_A Peroxisomal membrane pr 90.3 0.37 1.3E-05 32.8 4.4 29 37-65 31-60 (80)
148 2ecz_A Sorbin and SH3 domain-c 90.1 0.18 6E-06 33.6 2.5 28 36-67 22-49 (70)
149 2k9g_A SH3 domain-containing k 90.1 0.43 1.5E-05 32.0 4.5 28 36-65 24-51 (73)
150 3thk_A Spectrin alpha chain, b 90.1 0.31 1.1E-05 32.5 3.8 26 36-65 20-45 (73)
151 3feo_A MBT domain-containing p 90.0 0.56 1.9E-05 42.9 6.5 51 38-91 361-411 (437)
152 1i1j_A Melanoma derived growth 89.9 0.29 1E-05 36.3 3.9 29 35-66 36-66 (108)
153 1csk_A C-SRC SH3 domain; phosp 89.9 0.45 1.5E-05 31.7 4.4 26 36-64 26-51 (71)
154 1ri0_A Hepatoma-derived growth 89.8 0.84 2.9E-05 34.0 6.3 55 36-97 16-77 (110)
155 4b9w_A TDRD1, tudor domain-con 89.8 0.66 2.2E-05 37.2 6.1 57 37-99 63-120 (201)
156 1k1z_A VAV; SH3, proto-oncogen 89.8 0.35 1.2E-05 32.9 3.9 27 36-65 33-59 (78)
157 3h6z_A Polycomb protein SFMBT; 89.7 0.96 3.3E-05 41.6 7.9 52 38-92 375-426 (447)
158 2ct3_A Vinexin; SH3 domian, st 89.7 0.4 1.4E-05 31.7 4.1 27 36-66 22-48 (70)
159 2dl5_A KIAA0769 protein; SH3 d 89.6 0.38 1.3E-05 32.9 4.0 28 36-66 28-55 (78)
160 1z9q_A Neutrophil cytosol fact 89.5 0.12 4.2E-06 36.2 1.4 26 36-65 33-58 (79)
161 2ega_A SH3 and PX domain-conta 89.5 0.23 7.8E-06 33.1 2.7 27 36-66 23-49 (70)
162 1gcq_C VAV proto-oncogene; SH3 89.5 0.34 1.1E-05 32.2 3.5 26 37-65 26-51 (70)
163 2v1q_A SLA1, cytoskeleton asse 89.4 0.6 2.1E-05 29.8 4.6 27 36-65 17-43 (60)
164 2d8j_A FYN-related kinase; SH3 89.4 0.46 1.6E-05 32.0 4.2 27 36-66 22-48 (77)
165 2dm1_A Protein VAV-2; RHO fami 89.4 0.48 1.6E-05 31.9 4.3 28 36-65 22-49 (73)
166 1hsq_A Phospholipase C-gamma ( 89.3 0.076 2.6E-06 35.7 0.2 27 36-66 21-47 (71)
167 1x2k_A OSTF1, osteoclast stimu 89.3 0.49 1.7E-05 31.3 4.3 26 36-65 22-47 (68)
168 2b86_A Cytoplasmic protein NCK 89.3 0.41 1.4E-05 32.3 3.9 24 36-64 19-42 (67)
169 4esr_A Jouberin; AHI-1, AHI1, 89.3 0.44 1.5E-05 31.5 4.0 27 35-65 20-46 (69)
170 1wyx_A CRK-associated substrat 89.2 0.27 9.2E-06 32.6 2.9 29 36-65 18-46 (69)
171 2ed1_A 130 kDa phosphatidylino 89.2 0.2 6.7E-06 34.1 2.2 27 36-66 25-51 (76)
172 2oi3_A Tyrosine-protein kinase 89.1 0.41 1.4E-05 33.0 3.9 25 36-65 40-64 (86)
173 2o2o_A SH3-domain kinase-bindi 89.1 0.2 6.9E-06 36.0 2.3 27 35-65 32-58 (92)
174 2ydl_A SH3 domain-containing k 89.1 0.46 1.6E-05 32.0 4.0 28 36-65 17-44 (69)
175 1yn8_A NBP2, NAP1-binding prot 88.9 0.48 1.7E-05 30.2 3.9 27 36-66 16-42 (59)
176 1tuc_A Alpha-spectrin; capping 88.9 0.41 1.4E-05 31.4 3.6 25 36-64 4-28 (63)
177 2jw4_A Cytoplasmic protein NCK 88.9 0.52 1.8E-05 31.7 4.2 25 36-65 22-46 (72)
178 2dil_A Proline-serine-threonin 88.8 0.48 1.7E-05 31.3 4.0 27 36-66 23-49 (69)
179 3f70_A Lethal(3)malignant brai 88.7 0.61 2.1E-05 42.9 5.8 70 25-97 29-102 (456)
180 1wxt_A Hypothetical protein FL 88.7 0.56 1.9E-05 31.1 4.2 25 36-65 22-46 (68)
181 2kxd_A 11-MER peptide, SH3 dom 88.6 0.5 1.7E-05 31.8 3.9 25 36-64 14-38 (73)
182 1x2p_A Protein arginine N-meth 88.5 0.27 9.4E-06 32.5 2.6 26 36-65 22-47 (68)
183 1i07_A Epidermal growth factor 88.4 0.38 1.3E-05 31.0 3.1 24 36-64 16-39 (60)
184 2k2m_A EPS8-like protein 1; al 88.3 0.61 2.1E-05 31.0 4.2 25 36-65 23-47 (68)
185 4b9x_A TDRD1, tudor domain-con 88.3 1 3.4E-05 36.8 6.4 57 37-99 63-120 (226)
186 2jxb_A T-cell surface glycopro 88.3 0.5 1.7E-05 33.0 3.9 25 36-65 46-70 (86)
187 2egc_A SH3 and PX domain-conta 88.3 0.58 2E-05 31.8 4.1 27 36-66 24-50 (75)
188 3f70_A Lethal(3)malignant brai 88.3 1.3 4.6E-05 40.7 7.8 50 38-90 365-414 (456)
189 2kxc_A Brain-specific angiogen 88.3 0.3 1E-05 32.2 2.6 28 36-66 22-49 (67)
190 3eg3_A Proto-oncogene tyrosine 88.2 0.61 2.1E-05 30.0 4.1 28 35-65 19-46 (63)
191 1jqq_A PEX13P, peroxisomal mem 88.2 0.62 2.1E-05 32.6 4.4 29 37-65 31-60 (92)
192 2gqi_A RAS GTPase-activating p 88.1 0.24 8.2E-06 33.2 2.1 25 36-64 23-47 (71)
193 4ag1_C Fynomer; hydrolase-de n 88.1 0.62 2.1E-05 32.5 4.3 26 36-65 21-46 (84)
194 3a98_A DOCK2, dedicator of cyt 88.0 0.72 2.4E-05 36.8 5.2 26 35-65 31-56 (184)
195 2rf0_A Mitogen-activated prote 88.0 0.37 1.3E-05 34.3 3.1 30 36-65 44-74 (89)
196 2cre_A HEF-like protein; SH3 d 87.8 0.34 1.2E-05 32.1 2.7 29 36-65 22-50 (71)
197 3jv3_A Intersectin-1; SH3 doma 87.8 0.43 1.5E-05 39.2 3.8 26 36-65 17-42 (283)
198 1wxb_A Epidermal growth factor 87.7 0.69 2.3E-05 30.6 4.2 25 36-65 22-46 (68)
199 2l89_A PWWP domain-containing 87.7 0.84 2.9E-05 33.8 5.0 55 37-98 3-69 (108)
200 1ujy_A RHO guanine nucleotide 87.7 0.31 1.1E-05 33.0 2.4 26 36-65 25-50 (76)
201 2qnd_A FMR1 protein; KH domain 87.7 0.66 2.3E-05 35.8 4.6 66 109-174 68-144 (144)
202 1spk_A RSGI RUH-010, riken cDN 87.4 0.39 1.3E-05 32.1 2.8 28 36-66 23-50 (72)
203 2kgt_A Tyrosine-protein kinase 87.4 0.58 2E-05 31.1 3.6 26 36-66 25-50 (72)
204 2dnu_A RUH-061, SH3 multiple d 87.2 0.39 1.3E-05 31.9 2.7 27 36-66 23-49 (71)
205 2rqr_A CED-12 homolog, engulfm 87.2 0.43 1.5E-05 35.7 3.2 25 36-65 74-98 (119)
206 2enm_A Sorting nexin-9; SH3-li 87.1 0.72 2.5E-05 31.1 4.1 26 36-64 25-50 (77)
207 3rnj_A Brain-specific angiogen 87.1 0.53 1.8E-05 31.0 3.3 26 37-65 24-49 (67)
208 1h3z_A Hypothetical 62.8 kDa p 87.0 0.88 3E-05 33.5 4.8 54 37-97 4-71 (109)
209 2jt4_A Cytoskeleton assembly c 87.0 0.64 2.2E-05 30.7 3.7 27 36-65 21-47 (71)
210 2d8h_A SH3YL1 protein; SH3 dom 87.0 0.5 1.7E-05 32.3 3.2 28 36-65 32-59 (80)
211 2jmc_A Spectrin alpha chain, b 86.9 0.25 8.7E-06 33.8 1.7 26 36-65 6-31 (77)
212 1gbq_A GRB2; complex (signal t 86.9 0.36 1.2E-05 32.7 2.4 27 36-65 24-50 (74)
213 3i5r_A Phosphatidylinositol 3- 86.8 0.38 1.3E-05 33.2 2.5 30 36-65 20-60 (83)
214 1x6b_A RHO guanine exchange fa 86.4 0.49 1.7E-05 32.4 2.9 25 36-65 32-56 (79)
215 3pfs_A Bromodomain and PHD fin 86.3 1.4 4.8E-05 35.4 5.9 57 37-99 34-122 (158)
216 2e5k_A Suppressor of T-cell re 86.3 0.39 1.3E-05 33.9 2.4 29 36-64 31-59 (94)
217 1gri_A Growth factor bound pro 86.1 0.64 2.2E-05 37.0 3.9 26 36-65 173-198 (217)
218 2yt6_A Adult MALE urinary blad 86.0 1 3.6E-05 32.2 4.7 26 36-65 42-67 (109)
219 1bb9_A Amphiphysin 2; transfer 85.7 0.85 2.9E-05 34.0 4.1 31 36-66 59-90 (115)
220 2yuq_A Tyrosine-protein kinase 85.5 0.86 2.9E-05 31.5 3.8 26 36-65 34-59 (85)
221 2m0y_A Dedicator of cytokinesi 85.0 0.82 2.8E-05 30.5 3.4 27 35-66 25-51 (74)
222 3qwx_X Cell death abnormality 84.9 0.98 3.3E-05 35.1 4.3 26 36-65 133-158 (174)
223 1uhf_A Intersectin 2; beta bar 84.8 0.25 8.5E-06 33.0 0.7 25 36-65 23-47 (69)
224 1khc_A DNA cytosine-5 methyltr 84.8 1.3 4.5E-05 34.7 5.0 54 36-96 8-69 (147)
225 1x43_A Endophilin B1, SH3 doma 84.6 0.95 3.3E-05 30.9 3.7 28 36-65 32-59 (81)
226 1wi7_A SH3-domain kinase bindi 84.5 0.36 1.2E-05 31.9 1.4 26 36-65 22-47 (68)
227 3reb_B Tyrosine-protein kinase 84.1 1.2 4.2E-05 30.9 4.2 25 36-65 18-42 (90)
228 2gtj_A FYN-binding protein; SH 84.1 0.67 2.3E-05 34.5 2.8 28 36-65 42-69 (96)
229 3h6z_A Polycomb protein SFMBT; 83.6 0.74 2.5E-05 42.3 3.6 60 38-97 35-105 (447)
230 2da9_A SH3-domain kinase bindi 83.5 0.9 3.1E-05 30.1 3.1 28 36-65 22-49 (70)
231 1aww_A ATK, AMGX1, BPK, bruton 83.5 0.51 1.7E-05 31.1 1.8 25 36-64 23-47 (67)
232 2kym_A BUD emergence protein 1 82.8 1.6 5.4E-05 32.5 4.5 31 36-70 18-48 (120)
233 3llr_A DNA (cytosine-5)-methyl 82.7 1.1 3.9E-05 35.6 3.9 55 37-98 14-76 (154)
234 1ri9_A FYN-binding protein; SH 81.8 1.6 5.5E-05 32.8 4.2 26 36-65 56-81 (102)
235 2eyz_A V-CRK sarcoma virus CT1 81.5 1.1 3.7E-05 38.2 3.6 26 37-66 255-280 (304)
236 3qby_A Hepatoma-derived growth 81.4 1.4 4.6E-05 31.9 3.6 52 38-96 4-62 (94)
237 1udl_A Intersectin 2, KIAA1256 81.3 0.55 1.9E-05 33.4 1.4 26 36-65 49-74 (98)
238 1awj_A ITK; transferase, regul 81.1 0.25 8.6E-06 33.6 -0.5 26 36-65 35-60 (77)
239 1ng2_A Neutrophil cytosolic fa 81.0 1.3 4.5E-05 35.2 3.7 25 36-64 26-50 (193)
240 1u3o_A Huntingtin-associated p 80.7 1.6 5.3E-05 31.5 3.6 30 34-65 30-59 (82)
241 1ycs_B 53BP2, P53BP2; ankyrin 79.9 0.89 3.1E-05 35.8 2.4 32 36-68 185-216 (239)
242 4d8k_A Tyrosine-protein kinase 79.7 2.1 7.3E-05 33.1 4.5 25 36-65 27-51 (175)
243 1ugv_A KIAA0621, olygophrenin- 79.3 0.61 2.1E-05 31.3 1.0 27 36-65 25-51 (72)
244 1mv3_A MYC box dependent inter 78.9 1.9 6.3E-05 35.9 4.1 31 36-66 157-188 (213)
245 2cud_A SRC-like-adapter; SH3 d 78.9 2.8 9.5E-05 28.6 4.4 25 36-65 32-56 (79)
246 2vkn_A Protein SSU81; membrane 78.1 1.7 5.9E-05 28.7 3.0 25 36-65 22-46 (70)
247 2pz1_A RHO guanine nucleotide 77.8 1.8 6.1E-05 38.4 3.9 27 36-66 45-71 (466)
248 2rqv_A BUD emergence protein 1 77.6 0.79 2.7E-05 34.0 1.3 27 36-66 20-46 (108)
249 2dyb_A Neutrophil cytosol fact 76.7 1.9 6.4E-05 37.3 3.6 26 36-65 189-214 (341)
250 1ng2_A Neutrophil cytosolic fa 76.3 2.3 7.8E-05 33.8 3.8 25 37-65 97-121 (193)
251 3qwy_A Cell death abnormality 71.5 3.9 0.00013 34.6 4.3 26 36-65 162-187 (308)
252 1opk_A P150, C-ABL, proto-onco 71.3 4.2 0.00014 36.1 4.6 28 36-66 58-85 (495)
253 2dvj_A V-CRK sarcoma virus CT1 70.4 1.8 6.2E-05 35.3 1.9 25 36-64 151-175 (230)
254 2h8h_A Proto-oncogene tyrosine 69.5 4.3 0.00015 36.5 4.3 25 37-65 101-125 (535)
255 2xk0_A Polycomb protein PCL; t 67.5 29 0.00098 24.3 8.4 55 36-98 12-66 (69)
256 1kjw_A Postsynaptic density pr 66.7 5.3 0.00018 34.0 4.1 28 36-67 21-48 (295)
257 2eyz_A V-CRK sarcoma virus CT1 66.1 6.5 0.00022 33.3 4.5 25 36-64 149-173 (304)
258 1fmk_A C-SRC, P60-SRC, tyrosin 65.2 4.5 0.00016 35.3 3.5 27 35-65 16-42 (452)
259 2lqn_A CRK-like protein; SH2, 68.4 1.4 4.7E-05 37.6 0.0 30 37-70 255-284 (303)
260 3l42_A Peregrin; transcription 64.0 9.3 0.00032 29.6 4.7 57 37-99 3-91 (130)
261 2e5p_A Protein PHF1, PHD finge 63.8 21 0.00073 24.8 6.0 51 37-95 7-59 (68)
262 1gri_A Growth factor bound pro 63.5 3.1 0.00011 32.9 1.9 28 35-65 14-41 (217)
263 3kfv_A Tight junction protein 63.3 8.7 0.0003 33.4 4.9 48 3-66 2-54 (308)
264 3dlm_A Histone-lysine N-methyl 62.6 21 0.0007 29.9 6.8 80 5-95 101-206 (213)
265 1qcf_A Haematopoetic cell kina 62.6 7 0.00024 34.0 4.2 24 36-64 23-46 (454)
266 2m0o_A PHD finger protein 1; t 60.3 30 0.001 24.7 6.4 38 36-78 23-62 (79)
267 1k9a_A Carboxyl-terminal SRC k 59.8 9.7 0.00033 33.1 4.6 28 36-66 26-53 (450)
268 2qqr_A JMJC domain-containing 58.4 27 0.00093 26.5 6.3 51 37-94 3-60 (118)
269 2de0_X Alpha-(1,6)-fucosyltran 58.1 8.7 0.0003 35.7 4.2 27 35-65 456-482 (526)
270 2eqj_A Metal-response element- 57.0 30 0.001 24.0 5.7 37 37-78 11-49 (66)
271 3tvt_A Disks large 1 tumor sup 56.0 12 0.00039 32.1 4.3 47 5-66 5-51 (292)
272 3ask_A E3 ubiquitin-protein li 54.4 25 0.00086 29.5 6.0 59 20-78 55-121 (226)
273 3mea_A SAGA-associated factor 53.9 39 0.0014 27.3 7.0 81 36-117 41-143 (180)
274 4hcz_A PHD finger protein 1; p 52.9 50 0.0017 22.3 6.2 52 38-97 2-55 (58)
275 3haj_A Human pacsin2 F-BAR; pa 52.9 2.9 9.8E-05 37.9 0.0 28 36-66 443-470 (486)
276 2cpq_A FragIle X mental retard 52.6 47 0.0016 23.9 6.5 59 108-166 15-75 (91)
277 2e5q_A PHD finger protein 19; 52.6 22 0.00075 24.5 4.4 37 37-78 5-43 (63)
278 2lqn_A CRK-like protein; SH2, 57.2 3.1 0.0001 35.3 0.0 26 36-65 140-165 (303)
279 2io1_B Small ubiquitin-related 51.7 11 0.00036 27.0 2.9 43 22-64 49-92 (94)
280 4dey_A Voltage-dependent L-typ 50.6 16 0.00053 32.4 4.4 28 36-67 60-87 (337)
281 2dgr_A Ring finger and KH doma 50.1 50 0.0017 22.9 6.2 63 108-170 10-74 (83)
282 1x4n_A FAR upstream element bi 49.6 63 0.0021 22.4 7.6 67 106-173 13-85 (92)
283 3krm_A Insulin-like growth fac 48.5 37 0.0013 25.5 5.7 68 109-177 86-161 (163)
284 3qwy_A Cell death abnormality 48.2 3.8 0.00013 34.7 0.0 30 37-70 265-294 (308)
285 2l8d_A Lamin-B receptor; DNA b 48.2 65 0.0022 22.3 6.7 53 37-96 7-61 (66)
286 1ug1_A KIAA1010 protein; struc 48.1 24 0.00082 25.9 4.3 28 35-62 31-58 (92)
287 2l1t_A Uncharacterized protein 46.0 22 0.00074 26.9 3.9 42 36-79 9-51 (109)
288 2ftc_K 39S ribosomal protein L 45.7 35 0.0012 25.2 4.9 41 38-84 2-42 (98)
289 3r87_A Putative uncharacterize 44.7 37 0.0013 24.0 5.0 18 36-53 66-83 (135)
290 3v2d_T 50S ribosomal protein L 44.5 31 0.0011 27.3 4.8 35 37-71 19-55 (146)
291 2do3_A Transcription elongatio 44.2 77 0.0026 21.9 6.3 51 28-87 7-57 (69)
292 2ctf_A Vigilin; K homology typ 43.6 88 0.003 22.4 7.0 71 106-177 25-97 (102)
293 3r8s_P 50S ribosomal protein L 43.1 33 0.0011 26.0 4.6 34 37-70 16-51 (114)
294 1ec6_A RNA-binding protein NOV 42.7 78 0.0027 21.6 7.8 67 109-176 4-79 (87)
295 1j5k_A Heterogeneous nuclear r 39.4 91 0.0031 21.4 6.8 65 107-172 13-83 (89)
296 2io0_B Small ubiquitin-related 37.4 29 0.001 24.5 3.3 33 22-54 47-80 (91)
297 1ixd_A Cylindromatosis tumour- 37.3 57 0.002 24.0 5.0 64 33-96 11-90 (104)
298 2xkx_A Disks large homolog 4; 34.9 54 0.0019 31.0 5.7 25 38-66 449-473 (721)
299 2xdp_A Lysine-specific demethy 34.9 23 0.0008 27.1 2.6 50 37-94 4-61 (123)
300 2hh3_A KH-type splicing regula 33.5 1.3E+02 0.0044 21.7 6.4 63 109-172 12-80 (106)
301 2e6z_A Transcription elongatio 32.4 91 0.0031 20.2 5.0 38 36-78 4-41 (59)
302 3mp6_A MBP, SGF29, maltose-bin 32.2 90 0.0031 27.7 6.4 55 28-87 447-504 (522)
303 2gf6_A Conserved hypothetical 31.1 1.3E+02 0.0044 20.6 7.0 22 36-57 67-88 (135)
304 1mvf_D MAZE protein, PEMI-like 30.6 7.5 0.00026 26.8 -0.8 25 27-51 14-38 (82)
305 3shw_A Tight junction protein 28.4 51 0.0018 30.1 4.2 32 35-67 112-143 (468)
306 3zvk_E VAPB2, antitoxin of tox 28.0 31 0.0011 24.1 2.1 21 27-52 14-34 (78)
307 3db3_A E3 ubiquitin-protein li 27.8 1.5E+02 0.0051 23.7 6.3 54 40-97 11-84 (161)
308 3tsz_A Tight junction protein 27.4 48 0.0017 29.2 3.7 32 35-67 120-151 (391)
309 2dig_A Lamin-B receptor; tudor 27.4 1.6E+02 0.0053 20.4 7.3 54 37-97 10-65 (68)
310 2e3u_A PH-DIM2P, hypothetical 27.3 2.1E+02 0.0073 23.3 7.4 56 109-165 35-96 (219)
311 3db3_A E3 ubiquitin-protein li 27.0 90 0.0031 25.0 4.9 48 22-69 74-123 (161)
312 2zjr_M 50S ribosomal protein L 26.7 33 0.0011 27.6 2.3 35 37-71 24-60 (166)
313 2fuj_A Conserved hypothetical 25.2 1.5E+02 0.0052 20.4 5.5 18 36-53 68-85 (137)
314 2anr_A Neuro-oncological ventr 24.9 2.2E+02 0.0074 21.4 6.7 65 105-170 101-173 (178)
315 3mxn_A RECQ-mediated genome in 24.2 64 0.0022 25.7 3.5 30 136-165 122-151 (157)
316 2l66_A SSO7C4, transcriptional 24.1 13 0.00043 23.8 -0.5 27 27-53 13-39 (53)
317 3hm0_A Probable thioesterase; 23.5 1.6E+02 0.0054 22.0 5.6 22 36-57 101-122 (167)
318 3ask_A E3 ubiquitin-protein li 23.4 1.6E+02 0.0054 24.6 5.9 54 40-97 3-67 (226)
319 2qnd_A FMR1 protein; KH domain 23.4 2.1E+02 0.0071 21.4 6.3 56 108-163 4-61 (144)
320 4he6_A Peptidase family U32; u 23.2 43 0.0015 23.1 2.1 16 37-52 27-42 (89)
321 2hx5_A Hypothetical protein; t 22.9 2.1E+02 0.0071 20.3 6.6 20 36-55 76-95 (152)
322 1dtj_A RNA-binding neurooncolo 22.8 1.6E+02 0.0056 19.1 5.6 60 109-169 4-72 (76)
323 3uf8_A Ubiquitin-like protein 22.6 1.6E+02 0.0053 23.5 5.7 59 23-81 63-133 (209)
324 3ck1_A Putative thioesterase; 22.4 2E+02 0.0069 20.1 5.8 18 36-53 68-85 (150)
325 3kyd_D Small ubiquitin-related 22.0 67 0.0023 24.0 3.1 31 22-52 82-113 (115)
326 1j4w_A FUSE binding protein; s 21.5 2.6E+02 0.0089 20.9 7.4 63 109-172 4-72 (174)
327 1yfb_A Transition state regula 21.5 15 0.00051 24.4 -0.6 26 27-52 23-48 (59)
328 1gji_A C-REL protein, C-REL pr 21.3 51 0.0017 28.4 2.5 47 2-51 201-257 (275)
329 2cye_A TTHA1846, putative thio 21.2 1E+02 0.0036 21.1 3.9 18 36-53 62-79 (133)
330 1tyg_B YJBS; alpha beta barrel 21.2 48 0.0016 23.5 2.0 16 37-52 69-84 (87)
331 1wm3_A Ubiquitin-like protein 20.7 65 0.0022 21.2 2.6 28 22-49 43-71 (72)
332 2oiw_A Putative 4-hydroxybenzo 20.7 2.1E+02 0.0073 19.6 6.6 18 36-53 62-79 (136)
333 2cu3_A Unknown function protei 20.6 64 0.0022 20.8 2.4 17 36-52 45-61 (64)
334 3nmq_A Heat shock protein HSP 20.3 43 0.0015 28.0 1.9 21 40-60 141-161 (239)
335 2kl0_A Putative thiamin biosyn 20.1 55 0.0019 22.1 2.1 17 37-53 47-63 (73)
No 1
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*
Probab=100.00 E-value=4.3e-44 Score=282.57 Aligned_cols=100 Identities=46% Similarity=0.837 Sum_probs=82.8
Q ss_pred EEEEeecCCCCcccccccCcccccCCCCCCCCCccCCCeEEEEeecCCCCccceeeEEEEEEeccEEEEEEeccCCccee
Q psy985 7 NVSNPFSLLRWQPESKFQFSMVRLPPRETINSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGCQSTFTE 86 (191)
Q Consensus 7 ~v~V~f~eN~Wqpe~~vPf~~VRlPP~~~~~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGdf~vVey~~~d~~~te 86 (191)
+++|+| +|+|||+++|||++|||||+++.+.+|.+||+||||+++|++||||||+|+|+|+||+||+|+|+|||++|||
T Consensus 29 ~~~V~f-~n~w~~~~~vp~~~vRlpP~~~~~~~f~~gd~VEV~~~~~d~ep~gWw~a~I~~~kg~f~~V~y~~~~~~~~E 107 (128)
T 3h8z_A 29 SVTIFF-ENNWQSERQIPFGDVRLPPPADYNKEITEGDEVEVYSRANEQEPCGWWLARVRMMKGDFYVIEYAACDATYNE 107 (128)
T ss_dssp EEEEEE-TTCTTCCEEEEGGGEECCCCC----CCCTTCEEEEEECC---CCCEEEEEEEEEEETTEEEEEETTC----CE
T ss_pred cEEEEE-ccccCcceEechhhEEcCCCcccccCCCCCCEEEEEecCCCCCcCccEEEEEEEeeCCEEEEEEcCCCCCcce
Confidence 689999 9999999999999999999999889999999999999999999999999999999999999999999999999
Q ss_pred eecCCCcccCCCCCCCCcCce
Q psy985 87 IVPPERMRQKNTNPPIDAKTF 107 (191)
Q Consensus 87 IV~~erLR~~n~n~pi~~~~f 107 (191)
||+++||||+|+|+||+++||
T Consensus 108 iV~~~rlR~~n~~~p~~~~~f 128 (128)
T 3h8z_A 108 IVTLERLRPVNPNPLATKGSF 128 (128)
T ss_dssp EECGGGEEECCCCCCC-----
T ss_pred EEehhheEeCCCCCCcccCCC
Confidence 999999999999999999998
No 2
>3sd4_A PHD finger protein 20; tudor domain, transcription; 1.93A {Homo sapiens} PDB: 3q1j_A
Probab=98.18 E-value=6.4e-06 Score=57.55 Aligned_cols=60 Identities=12% Similarity=0.244 Sum_probs=48.8
Q ss_pred CCCCCCCCccCCCeEEEEeecCCCCccceeeEEEEEE--eccEEEEEEeccCCcceeeecCCC--cccC
Q psy985 32 PRETINSGFVENQEVEVFSKATEGESCGWWKVIVKMI--KGDFHVVEYLGCQSTFTEIVPPER--MRQK 96 (191)
Q Consensus 32 P~~~~~~~~~egdeVEV~sran~~ep~gWW~a~V~~i--KGdf~vVey~~~d~~~teIV~~er--LR~~ 96 (191)
|+......|++|+.+|+..+.+. |+.|+|..+ .|..+.|.|.||+..|.++|..+. |+|+
T Consensus 5 p~~~~~~~F~vGmkLEa~d~~~p-----~~~AtV~~v~~~~~~~~VhfdGw~~~~D~W~~~dS~~i~Pv 68 (69)
T 3sd4_A 5 PPNRRGISFEVGAQLEARDRLKN-----WYPAHIEDIDYEEGKVLIHFKRWNHRYDEWFCWDSPYLRPL 68 (69)
T ss_dssp CCCCTTCCCSTTCEEEEECTTSC-----EEEEEEEEEETTTTEEEEEETTSCGGGCEEEETTCTTEECC
T ss_pred CCCCCCCCcCCCCEEEEEECCCC-----ccccEEEEEeccCCEEEEEeCCCCCCCCEEEcCCCCCeeEC
Confidence 34344678999999999976654 489999998 788999999999999999998764 5553
No 3
>2eqm_A PHD finger protein 20-like 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2jtf_A
Probab=98.04 E-value=2e-05 Score=57.96 Aligned_cols=58 Identities=14% Similarity=0.238 Sum_probs=50.3
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEEEEe--ccEEEEEEeccCCcceeeecCC--CcccCCC
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVKMIK--GDFHVVEYLGCQSTFTEIVPPE--RMRQKNT 98 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~~iK--Gdf~vVey~~~d~~~teIV~~e--rLR~~n~ 98 (191)
....|.+|+.||+.-+.+. |..|+|..+. |.-+.|.|.||+..|.++|..+ +|+|...
T Consensus 16 ~~~~F~vGmkLEA~D~~~~-----~~~a~i~~v~~~~~~v~VHfdGW~~~yDeWv~~dS~~I~P~g~ 77 (88)
T 2eqm_A 16 PGITFEIGARLEALDYLQK-----WYPSRIEKIDYEEGKMLVHFERWSHRYDEWIYWDSNRLRPLER 77 (88)
T ss_dssp SSCCCCSSCEEEEECTTSC-----EEEEEEEEEETTTTEEEEEESSSTTTEEEEEETTSCCEECCCC
T ss_pred CcCcCCCCCEEEEEcCCCC-----eeEEEEEEEeccCCEEEEEECCCCCcccEEeeCCCCcEecccc
Confidence 3578999999999976653 8899988776 7799999999999999999988 9999873
No 4
>2f5k_A MORF-related gene 15 isoform 1; beta barrel, gene regulation; 2.20A {Homo sapiens} SCOP: b.34.13.3 PDB: 2efi_A
Probab=98.00 E-value=1e-05 Score=61.25 Aligned_cols=60 Identities=18% Similarity=0.267 Sum_probs=49.9
Q ss_pred CCCCCCCCccCCCeEEEEeecCCCCccceeeEEEEEEe----ccEEEEEEeccCCcceeeecCCCcccCC
Q psy985 32 PRETINSGFVENQEVEVFSKATEGESCGWWKVIVKMIK----GDFHVVEYLGCQSTFTEIVPPERMRQKN 97 (191)
Q Consensus 32 P~~~~~~~~~egdeVEV~sran~~ep~gWW~a~V~~iK----Gdf~vVey~~~d~~~teIV~~erLR~~n 97 (191)
|+.+....|.+|+.|.||. -.-|+.|+|..++ +..|.|-|.||+..+.|+|+.+||+..|
T Consensus 15 ~~~~~~~~f~vGekVl~~~------~~~~YeAkIl~v~~~~~~~~Y~VHY~GwNkR~DEWV~~~Rl~k~t 78 (102)
T 2f5k_A 15 PKQDPKPKFQEGERVLCFH------GPLLYEAKCVKVAIKDKQVKYFIHYSGWNKNWDEWVPESRVLKYV 78 (102)
T ss_dssp ---CCSCSCCTTCEEEEES------SSSEEEEEEEEEEEETTEEEEEEEETTSCGGGCEEEEGGGEEESS
T ss_pred cCCCCCcccCCCCEEEEEE------CCEEEEEEEEEEEEcCCCcEEEEEeCCcCCCceeeccHhhcccCC
Confidence 3333467899999999997 1369999999988 3389999999999999999999999886
No 5
>3m9q_A Protein MALE-specific lethal-3; chromodomain, MSL3, methyllysine recognition, aromatic CAGE, complex, transcription upregulation; 1.29A {Drosophila melanogaster} SCOP: b.34.13.0
Probab=97.72 E-value=8.7e-05 Score=56.09 Aligned_cols=61 Identities=8% Similarity=0.079 Sum_probs=51.0
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEEEEec---------cEEEEEEeccCCcceeeecCCCcccCC
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVKMIKG---------DFHVVEYLGCQSTFTEIVPPERMRQKN 97 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKG---------df~vVey~~~d~~~teIV~~erLR~~n 97 (191)
....|.+|+.|-+|.... ....-|+.|+|..++. ..|.|-|.||++++.|.|+.+||+..|
T Consensus 16 ~~~~f~~GEkVLc~h~d~-~kg~~lYeAKIl~v~~~~~~~~~~~~~Y~VHY~GWn~rwDEWV~edRilk~~ 85 (101)
T 3m9q_A 16 ETPLFHKGEIVLCYEPDK-SKARVLYTSKVLNVFERRNEHGLRFYEYKIHFQGWRPSYDRAVRATVLLKDT 85 (101)
T ss_dssp CCCCCCTTCEEEEECCCT-TSCCCEEEEEEEEEEEEECTTSCEEEEEEEEETTSCGGGCEEECGGGEEECC
T ss_pred CCCcccCCCEEEEEecCC-CCCCcceEeEEEEEEecCCccccCceEEEEEeCCCCcCceeecCHHHcccCC
Confidence 457899999999998422 2234599999999864 389999999999999999999999886
No 6
>2lcc_A AT-rich interactive domain-containing protein 4A; chromobarrel domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=97.63 E-value=0.00011 Score=52.59 Aligned_cols=58 Identities=19% Similarity=0.260 Sum_probs=49.4
Q ss_pred CCccCCCeEEEEeecCCCCccceeeEEEEEEecc----EEEEEEeccCCcceeeecCCCcccCC
Q psy985 38 SGFVENQEVEVFSKATEGESCGWWKVIVKMIKGD----FHVVEYLGCQSTFTEIVPPERMRQKN 97 (191)
Q Consensus 38 ~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGd----f~vVey~~~d~~~teIV~~erLR~~n 97 (191)
..|.+|+.|.|+... ....-|.+|+|..++.. -|.|-|.||+..+.|.|+.+||+..+
T Consensus 4 ~~~~vGekV~~~~~d--~k~~~~y~AkIl~i~~~~~~~~Y~VHY~gwnkr~DEWV~~~ri~~~~ 65 (76)
T 2lcc_A 4 EPCLTGTKVKVKYGR--GKTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPL 65 (76)
T ss_dssp CCSSTTCEEEEEEEE--TTEEEEEEEEEEEEEEETTEEEEEEEETTSCCSSCEEEEGGGEECSS
T ss_pred cccCCCCEEEEEeCC--CCCCCEEEEEEEEEEccCCceEEEEEeCCcCCCceEecChhhccccc
Confidence 478999999999863 22346999999988754 79999999999999999999998765
No 7
>3m9p_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3oa6_A* 3ob9_A*
Probab=97.61 E-value=0.00013 Score=56.05 Aligned_cols=64 Identities=8% Similarity=0.143 Sum_probs=51.0
Q ss_pred CCCCCCCccCCCeEEEEeecCCCCccceeeEEEEEEec---------cEEEEEEeccCCcceeeecCCCcccCC
Q psy985 33 RETINSGFVENQEVEVFSKATEGESCGWWKVIVKMIKG---------DFHVVEYLGCQSTFTEIVPPERMRQKN 97 (191)
Q Consensus 33 ~~~~~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKG---------df~vVey~~~d~~~teIV~~erLR~~n 97 (191)
+.+....|.+|+.|-+|. .+.....-|+.|+|..++. ..|.|-|.||+.++.|.|+.+||+..|
T Consensus 13 ~~~~~~~F~~GEkVLc~h-gd~~k~~~lYeAKIl~v~~~~~~~g~~~~~Y~VHY~GWn~~wDEWV~e~rllk~~ 85 (110)
T 3m9p_A 13 SEGMKFKFHSGEKVLCFE-PDPTKARVLYDAKIVDVIVGKDEKGRKIPEYLIHFNGWNRSWDRWAAEDHVLRDT 85 (110)
T ss_dssp -----CCSCTTCEEEEEC-SCTTSCCCEEEEEEEEEEEEECTTCCEEEEEEEEETTSCGGGCEEEEGGGEEECC
T ss_pred ccCCCCcccCCCEEEEEc-CCCCCCCCceeeEEEEEEeccCcccccceEEEEEECCCCcchhhccCHhhhhcCC
Confidence 344677899999999994 3445567799999999863 379999999999999999999999876
No 8
>3oa6_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3ob9_A*
Probab=97.36 E-value=0.00038 Score=53.34 Aligned_cols=66 Identities=8% Similarity=0.173 Sum_probs=49.1
Q ss_pred CCCCCCCCCccCCCeEEEEeecCCCCccceeeEEEEEEe---cc------EEEEEEeccCCcceeeecCCCcccCC
Q psy985 31 PPRETINSGFVENQEVEVFSKATEGESCGWWKVIVKMIK---GD------FHVVEYLGCQSTFTEIVPPERMRQKN 97 (191)
Q Consensus 31 PP~~~~~~~~~egdeVEV~sran~~ep~gWW~a~V~~iK---Gd------f~vVey~~~d~~~teIV~~erLR~~n 97 (191)
.|+.+....|.+|+.|-+|..-. ....-+|-|+|..+. ++ -|.|-|.||..++.|.|+.+||+..|
T Consensus 11 ~~~~~~k~~F~~gEkVLc~h~d~-~kg~llYeAKIl~v~~~~~~~~~~~~~Y~VHY~GWn~~WDEWV~~drllk~n 85 (110)
T 3oa6_A 11 SASEGMKFKFHSGEKVLCFEPDP-TKARVLYDAKIVDVIVGKDEKGRKIPEYLIHFNGWNRSWDRWAAEDHVLRDT 85 (110)
T ss_dssp -------CCSCTTCEEEEECSCT-TSCCCEEEEEEEEEEEEECTTCCEEEEEEEEETTSCGGGCEEEEGGGEEECC
T ss_pred CCCCCCCcccCCCCEEEEEecCC-CCCcccEEEEEEEEEeccCCcCCcccEEEEEECCcCcchhhccChhhhhcCC
Confidence 34455678999999999998432 234567899998773 32 59999999999999999999999876
No 9
>2k3y_A Chromatin modification-related protein EAF3; dimethylated histone H3K36, EAF3-H3K36ME2 fusion, chromo barrel domain, histone deacetylase; HET: M2L; NMR {Saccharomyces cerevisiae}
Probab=97.33 E-value=0.0003 Score=55.69 Aligned_cols=55 Identities=22% Similarity=0.292 Sum_probs=48.3
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEEEEEec------------------------------c------------EEE
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIVKMIKG------------------------------D------------FHV 74 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKG------------------------------d------------f~v 74 (191)
+..|.+|+.|-+|. -..||.|+|.+++. + -|.
T Consensus 7 ~~~f~~gekvl~~h------g~llYeAKVl~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~Y~ 80 (136)
T 2k3y_A 7 EQEFALGGRVLAFH------GPLMYEAKILKIWDPSSKMYTSIPNDKPGGSSQATKEIKPQKLGEDESIPEEIINGKSFF 80 (136)
T ss_dssp GGSCCTTSEEEEEC------SSCEEEEEEEEEEETTTTEEEECSSCCCTTCSCCCSSBCCCCSCSSCCCCHHHHTSCEEE
T ss_pred ccccCCCCEEEEEE------CCeeEEEEEEEEEeccccccccccccccccccccccccccccccccccCcccccccceEE
Confidence 45789999999999 24599999998872 2 799
Q ss_pred EEEeccCCcceeeecCCCcccCC
Q psy985 75 VEYLGCQSTFTEIVPPERMRQKN 97 (191)
Q Consensus 75 Vey~~~d~~~teIV~~erLR~~n 97 (191)
|-|.||.+++.|+|+.+|||..|
T Consensus 81 VHY~GWn~rwDEWV~~dRil~~~ 103 (136)
T 2k3y_A 81 IHYQGWKSSWDEWVGYDRIRAYN 103 (136)
T ss_dssp ECCTTSCGGGCEEEETTTEEESC
T ss_pred EEeCCcCCcceeeecHhhhhhCC
Confidence 99999999999999999999987
No 10
>2lrq_A Protein MRG15, NUA4 complex subunit EAF3 homolog; epigenetics, LID complex, transcription; NMR {Drosophila melanogaster}
Probab=96.42 E-value=3.3e-05 Score=56.47 Aligned_cols=57 Identities=25% Similarity=0.279 Sum_probs=49.6
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEEEEec----cEEEEEEeccCCcceeeecCCCcccCCC
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVKMIKG----DFHVVEYLGCQSTFTEIVPPERMRQKNT 98 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKG----df~vVey~~~d~~~teIV~~erLR~~n~ 98 (191)
....|.+|+.|.||.. ..|+.|+|..++- .-|.|-|.||+..+.|+|+.+||+..|.
T Consensus 9 ~~~~~~~Gekv~~~~~------~~~y~AkIl~i~~~~~~~~YyVHY~GwNkR~DEWV~~~Rl~k~t~ 69 (85)
T 2lrq_A 9 ANTLFVDGERVLCFHG------PLIYEAKVLKTKPDATPVEYYIHYAGWSKNWDEWVPENRVLKYND 69 (85)
Confidence 3578999999999982 2789999998872 3899999999999999999999999873
No 11
>1mhn_A SurviVal motor neuron protein; SMN, SMA, spinal muscular atrophy, RNA binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 PDB: 4a4e_A* 4a4g_A*
Probab=97.28 E-value=0.00087 Score=45.03 Aligned_cols=55 Identities=11% Similarity=0.028 Sum_probs=44.7
Q ss_pred CCccCCCeEEEEeecCCCCccceeeEEEEEEec--cEEEEEEeccCCcceeeecCCCcccCCC
Q psy985 38 SGFVENQEVEVFSKATEGESCGWWKVIVKMIKG--DFHVVEYLGCQSTFTEIVPPERMRQKNT 98 (191)
Q Consensus 38 ~~~~egdeVEV~sran~~ep~gWW~a~V~~iKG--df~vVey~~~d~~~teIV~~erLR~~n~ 98 (191)
..+.+||.+-+....+. .|++|+|..+.+ +-+.|.|.+.. .+|.|+...|||.++
T Consensus 2 ~~~~~G~~c~A~~s~Dg----~wYrA~I~~i~~~~~~~~V~f~DYG--n~e~v~~~~Lr~~~~ 58 (59)
T 1mhn_A 2 QQWKVGDKCSAIWSEDG----CIYPATIASIDFKRETCVVVYTGYG--NREEQNLSDLLSPIC 58 (59)
T ss_dssp CCCCTTCEEEEECTTTS----CEEEEEEEEEETTTTEEEEEETTTT--EEEEEEGGGCBCTTC
T ss_pred CcCCcCCEEEEEECCCC----CEEEEEEEEEcCCCCEEEEEEEcCC--CEEEEcHHHeeCCCC
Confidence 35789999988653332 599999999985 68999998765 489999999999864
No 12
>1wgs_A MYST histone acetyltransferase 1; tudor domain, MYST family, struct genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.34.13.3
Probab=97.27 E-value=0.00088 Score=52.45 Aligned_cols=57 Identities=16% Similarity=0.197 Sum_probs=48.1
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEEEEe-----cc-EEEEEEeccCCcceeeecCCCcccCC
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVKMIK-----GD-FHVVEYLGCQSTFTEIVPPERMRQKN 97 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~~iK-----Gd-f~vVey~~~d~~~teIV~~erLR~~n 97 (191)
....|.+|+.|.||.. + .-|+.|+|..++ |. -|+|-|.||+..+.|+|+.+||+-..
T Consensus 9 ~~~~~~vGe~v~~~~~--d---~~~y~AkIl~i~~~~~~~~~~YyVHY~gwNkR~DEWV~~~ri~~~~ 71 (133)
T 1wgs_A 9 PEVTVEIGETYLCRRP--D---STWHSAEVIQSRVNDQEGREEFYVHYVGFNRRLDEWVDKNRLALTK 71 (133)
T ss_dssp CCCCCCTTSEEEEEET--T---TEEEEEEEEEEEEETTTTEEEEEEECTTTCSSCCEEECTTTSCCTT
T ss_pred cccccCCCCEEEEEeC--C---CCEEEEEEEEEEeccCCCceEEEEeccCcCCCceeecChhhccccc
Confidence 3557999999999984 2 379999999987 33 79999999999999999999997543
No 13
>4a4f_A SurviVal of motor neuron-related-splicing factor; RNA binding protein; HET: 2MR; NMR {Homo sapiens} PDB: 4a4h_A*
Probab=97.26 E-value=0.00088 Score=45.84 Aligned_cols=55 Identities=7% Similarity=0.177 Sum_probs=45.8
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEEEEEec--cEEEEEEeccCCcceeeecCCCcccCC
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIVKMIKG--DFHVVEYLGCQSTFTEIVPPERMRQKN 97 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKG--df~vVey~~~d~~~teIV~~erLR~~n 97 (191)
...+.+||.+-+....|. .|++|+|..+.+ +.+.|.|.+..+ +|.|+..+|||..
T Consensus 6 ~~~~~vGd~c~A~~s~Dg----~wYrA~I~~v~~~~~~~~V~fvdYGn--~e~V~~~~Lrpl~ 62 (64)
T 4a4f_A 6 THSWKVGDKCMAVWSEDG----QCYEAEIEEIDEENGTAAITFAGYGN--AEVTPLLNLKPVE 62 (64)
T ss_dssp SSCCCTTCEEEEECTTTS----SEEEEEEEEEETTTTEEEEEETTTTE--EEEEEGGGEECCS
T ss_pred CCCCCCCCEEEEEECCCC----CEEEEEEEEEcCCCCEEEEEEEecCC--EEEEeHHHcEeCC
Confidence 478999999999663333 599999999997 489999997754 8999999999974
No 14
>2eko_A Histone acetyltransferase htatip; chromo domain, histone tail, chromatin organization modifier, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.17 E-value=0.0014 Score=48.18 Aligned_cols=61 Identities=18% Similarity=0.293 Sum_probs=50.0
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEEEEecc----EEEEEEeccCCcceeeecCCCcccCC
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGD----FHVVEYLGCQSTFTEIVPPERMRQKN 97 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGd----f~vVey~~~d~~~teIV~~erLR~~n 97 (191)
....|.+|+.|.|+....+. -.-|..|+|..++.. -|+|-|.||+..+.|.|+.+||+-..
T Consensus 6 ~~~~~~vG~kv~v~~~~~~~-~~~~y~AkIl~i~~~~~~~~YyVHY~g~NkRlDEWV~~~rl~~~~ 70 (87)
T 2eko_A 6 SGGEIIEGCRLPVLRRNQDN-EDEWPLAEILSVKDISGRKLFYVHYIDFNRRLDEWVTHERLDLKK 70 (87)
T ss_dssp SSCSCCTTCEEEBCEECTTC-CEECCEEEEEEECCSSSCCCEEEEECSSCSCCCEEECTTTBCGGG
T ss_pred ccccccCCCEEEEEEcccCC-CCeEEEEEEEEEEEcCCCcEEEEEeCCCCcccccccCHhHccccc
Confidence 45689999999998853222 237999999998863 79999999999999999999997644
No 15
>2rnz_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=97.01 E-value=0.0032 Score=46.93 Aligned_cols=63 Identities=14% Similarity=0.130 Sum_probs=50.6
Q ss_pred ccCCCCC--CCCCccCCCeEEEEeecCCCCccceeeEEEEEEec----cEEEEEEeccCCcceeeecCCCcccCC
Q psy985 29 RLPPRET--INSGFVENQEVEVFSKATEGESCGWWKVIVKMIKG----DFHVVEYLGCQSTFTEIVPPERMRQKN 97 (191)
Q Consensus 29 RlPP~~~--~~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKG----df~vVey~~~d~~~teIV~~erLR~~n 97 (191)
-||.+.+ ....|.+|+.|-|+. + .-|..|+|..++. --|+|-|.||+..+.|+|+.+||.-..
T Consensus 13 ~~~~~~~~~~~~~~~vG~kv~v~~---~---~~~yeAeIl~ir~~~g~~~YYVHY~g~NkRlDEWV~~~RI~l~~ 81 (94)
T 2rnz_A 13 GLVPRGSHMSVDDIIIKCQCWVQK---N---DEERLAEILSINTRKAPPKFYVHYVNYNKRLDEWITTDRINLDK 81 (94)
T ss_dssp CSSCSSCSSCGGGCCTTEEEEEEC---S---SCEEEEEEEEEECSSSSCEEEEECTTSCSTTCEEEETTTBCSSS
T ss_pred CCccCCCccccccccCCCEEEEEE---C---CEEEEEEEEEEEEcCCCcEEEEEeCCcCcccccccCHHHccccc
Confidence 3565544 345689999999994 2 2699999999884 279999999999999999999997543
No 16
>1g5v_A SurviVal motor neuron protein 1; mRNA processing, translation; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=97.00 E-value=0.002 Score=47.24 Aligned_cols=56 Identities=11% Similarity=0.057 Sum_probs=45.1
Q ss_pred CCccCCCeEEEEeecCCCCccceeeEEEEEEec--cEEEEEEeccCCcceeeecCCCcccCCCC
Q psy985 38 SGFVENQEVEVFSKATEGESCGWWKVIVKMIKG--DFHVVEYLGCQSTFTEIVPPERMRQKNTN 99 (191)
Q Consensus 38 ~~~~egdeVEV~sran~~ep~gWW~a~V~~iKG--df~vVey~~~d~~~teIV~~erLR~~n~n 99 (191)
..+.+||.+-+....|. .|++|+|..+.+ +-|.|.|.+..+ +|.|++.+|||..+.
T Consensus 9 ~~~kvGd~C~A~ys~Dg----~wYrA~I~~i~~~~~~~~V~fiDYGN--~E~V~~~~Lrp~~~~ 66 (88)
T 1g5v_A 9 QQWKVGDKCSAIWSEDG----CIYPATIASIDFKRETCVVVYTGYGN--REEQNLSDLLSPICE 66 (88)
T ss_dssp CCCCSSCEEEEECTTTC----CEEEEEEEEEETTTTEEEEEETTTCC--EEEEEGGGCBCCC--
T ss_pred CCCCCCCEEEEEECCCC----CEEEEEEEEecCCCCEEEEEEecCCC--EEEEcHHHcccCChh
Confidence 47899999999663333 599999999986 689999987754 899999999997643
No 17
>2equ_A PHD finger protein 20-like 1; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.82 E-value=0.0025 Score=45.33 Aligned_cols=55 Identities=9% Similarity=0.149 Sum_probs=46.0
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEEEEEec-cEEEEEEeccCCcceeeecCCCcccCCCC
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIVKMIKG-DFHVVEYLGCQSTFTEIVPPERMRQKNTN 99 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKG-df~vVey~~~d~~~teIV~~erLR~~n~n 99 (191)
...+.+||.|.+... |+ .|++|+|..+.+ +.|.|.|.+. ..|.|+..+|||...+
T Consensus 7 ~~~~kvGd~clA~ws--Dg---~~Y~A~I~~v~~~~~~~V~f~Dy---n~e~v~~~~lrplp~~ 62 (74)
T 2equ_A 7 GFDFKAGEEVLARWT--DC---RYYPAKIEAINKEGTFTVQFYDG---VIRCLKRMHIKAMPED 62 (74)
T ss_dssp CCCCCTTCEEEEECS--SS---SEEEEEEEEESTTSSEEEEETTS---CEEEECGGGEECCCGG
T ss_pred CCCCCCCCEEEEECC--CC---CEEEEEEEEECCCCEEEEEEecC---CeEEecHHHCeeCChh
Confidence 578999999999654 33 599999999987 5899999855 6899999999998643
No 18
>3s6w_A Tudor domain-containing protein 3; methylated arginine recognize, ISO-propanol, transcri; 1.78A {Homo sapiens} PDB: 3pmt_A*
Probab=96.77 E-value=0.0029 Score=41.56 Aligned_cols=51 Identities=14% Similarity=0.206 Sum_probs=40.5
Q ss_pred ccCCCeEEEEeecCCCCccceeeEEEEEEe--ccEEEEEEeccCCcceeeecCCCcccC
Q psy985 40 FVENQEVEVFSKATEGESCGWWKVIVKMIK--GDFHVVEYLGCQSTFTEIVPPERMRQK 96 (191)
Q Consensus 40 ~~egdeVEV~sran~~ep~gWW~a~V~~iK--Gdf~vVey~~~d~~~teIV~~erLR~~ 96 (191)
+++||.+-+....+. .|++|+|..+. ++.+.|.|.+..+ +|.|+...|||.
T Consensus 2 wk~G~~c~A~~s~Dg----~wYrA~I~~i~~~~~~~~V~fvDYGn--~e~v~~~~lrpi 54 (54)
T 3s6w_A 2 WKPGDECFALYWEDN----KFYRAEVEALHSSGMTAVVKFIDYGN--YEEVLLSNIKPI 54 (54)
T ss_dssp CCTTCEEEEEETTTT----EEEEEEEEEC--CCSEEEEEETTTCC--EEEEEGGGEECC
T ss_pred CCCCCEEEEEECCCC----CEEEEEEEEEeCCCCEEEEEEEccCC--eEEEeHHHEEEC
Confidence 578999999653333 59999999985 4689999997754 899999999984
No 19
>2d9t_A Tudor domain-containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.34.9.1
Probab=96.75 E-value=0.004 Score=44.21 Aligned_cols=57 Identities=12% Similarity=0.110 Sum_probs=46.6
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEEEEEec--cEEEEEEeccCCcceeeecCCCcccCCCC
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIVKMIKG--DFHVVEYLGCQSTFTEIVPPERMRQKNTN 99 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKG--df~vVey~~~d~~~teIV~~erLR~~n~n 99 (191)
...+.+||.+-+....+. .|++|+|..+.+ +-+.|.|.+. -.+|.|+...|||..+.
T Consensus 7 ~~~~~~G~~c~A~~s~Dg----~wYRA~I~~i~~~~~~~~V~fiDY--GN~e~V~~~~Lr~l~~~ 65 (78)
T 2d9t_A 7 GKVWKPGDECFALYWEDN----KFYRAEVEALHSSGMTAVVKFTDY--GNYEEVLLSNIKPVQTE 65 (78)
T ss_dssp CCCCCTTCEEEEECTTTC----CEEEEEEEEECSSSSEEEEEETTT--TEEEEEEGGGEEECCCC
T ss_pred ccCCCcCCEEEEEECCCC----CEEEEEEEEEeCCCCEEEEEEEcC--CCeEEEcHHHeEeCCHH
Confidence 467899999999664333 599999999986 6899999855 45899999999998754
No 20
>1wjq_A KIAA1798 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3
Probab=96.71 E-value=0.0053 Score=46.63 Aligned_cols=57 Identities=14% Similarity=0.164 Sum_probs=47.4
Q ss_pred CCccCCCeEEEEeecCCCCccceeeEEEEEEeccEEEEEEeccCCcceeeecCC--CcccCC
Q psy985 38 SGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGCQSTFTEIVPPE--RMRQKN 97 (191)
Q Consensus 38 ~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGdf~vVey~~~d~~~teIV~~e--rLR~~n 97 (191)
-.|.+|+.+||--+ ..|.-+|.|+|..+.|....|.|.|||..|..++..+ .|.|+.
T Consensus 12 ~~F~~GMKLEAvD~---~~p~~icvATV~~v~g~rl~v~fDGw~~~~D~W~~~dSpdIhPVG 70 (107)
T 1wjq_A 12 HGFQKKMKLEVVDK---RNPMFIRVATVADTDDHRVKVHFDGWNNCYDYWIDADSPDIHPVG 70 (107)
T ss_dssp SSCCSSCEEEEECT---TCTTCEEEEEEEEECSSCEEEECSSSCGGGCEEECTTCSSCEETT
T ss_pred ccCCCCCEEEEEcC---CCCCcEEeEEEEEecCCEEEEEeCCCCCcCCEEEECCCCCcccCc
Confidence 46999999999854 4567799999999999999999999999998886554 455554
No 21
>3pnw_C Tudor domain-containing protein 3; FAB, structural genomics consortium, antibody, SGC, protein immune system complex; 2.05A {Homo sapiens}
Probab=96.62 E-value=0.005 Score=43.74 Aligned_cols=57 Identities=12% Similarity=0.151 Sum_probs=44.5
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEEEEEec--cEEEEEEeccCCcceeeecCCCcccCCCC
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIVKMIKG--DFHVVEYLGCQSTFTEIVPPERMRQKNTN 99 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKG--df~vVey~~~d~~~teIV~~erLR~~n~n 99 (191)
...+.+||.+-+....+. .|++|+|..+.+ +.+.|.|.+..+ +|.|+...|||..++
T Consensus 15 ~~~~kvGd~C~A~ys~Dg----~wYRA~I~~i~~~~~~~~V~fvDYGN--~e~V~~~~Lr~l~~~ 73 (77)
T 3pnw_C 15 AKMWKPGDECFALYWEDN----KFYRAEVEALHSSGMTAVVKFIDYGN--YEEVLLSNIKPIQTE 73 (77)
T ss_dssp HTTCCTTCEEEEEETTTT----EEEEEEEEEECTTSSEEEEEETTTCC--EEEEEGGGEECC---
T ss_pred cCCCCcCCEEEEEECCCC----CEEEEEEEEEeCCCCEEEEEEEcCCC--eEEEeHHHeEECChh
Confidence 567899999999653333 699999999964 589999997754 899999999997643
No 22
>2ro0_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=96.51 E-value=0.0055 Score=45.29 Aligned_cols=55 Identities=11% Similarity=0.056 Sum_probs=46.7
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEEEEec----cEEEEEEeccCCcceeeecCCCcccC
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVKMIKG----DFHVVEYLGCQSTFTEIVPPERMRQK 96 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKG----df~vVey~~~d~~~teIV~~erLR~~ 96 (191)
....|.+|+.|-|+. + --|..|+|..++- --|+|-|.||+..+.|.|+.+||.-.
T Consensus 20 ~~~~~~vG~kv~v~~--~----~~~y~AkIl~ir~~~~~~~YyVHY~g~NkRlDEWV~~~rl~l~ 78 (92)
T 2ro0_A 20 SVDDIIIKCQCWVQK--N----DEERLAEILSINTRKAPPKFYVHYVNYNKRLDEWITTDRINLD 78 (92)
T ss_dssp CTTSCCTTCEEEEEE--T----TEEEEEEEEEEECSSSSCEEEEEETTSCTTSCEEEEGGGEETT
T ss_pred ccccccCCCEEEEEE--C----CEEEEEEEEEEEEcCCCcEEEEEeCCcCcccccccCHhHcccc
Confidence 345789999999995 2 2799999999884 27999999999999999999999754
No 23
>2biv_A SCML2 protein, sex COMB on midleg-like protein 2; MBT, malignant brain tumor, transcription factor; 1.7A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 PDB: 1oi1_A 2vyt_A* 2p0k_A
Probab=96.24 E-value=0.012 Score=50.23 Aligned_cols=58 Identities=10% Similarity=-0.019 Sum_probs=47.5
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEEEEEeccEEEEEEeccCCcceeeec--CCCcccCC
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGCQSTFTEIVP--PERMRQKN 97 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGdf~vVey~~~d~~~teIV~--~erLR~~n 97 (191)
.-.|.+|+.+||--+ ..|..+|.|+|..+.|..+.|.|.|+|++|.-.+. ...|.|++
T Consensus 60 ~~~f~vGmKLEa~D~---~~~~~~~vATV~~v~g~~l~l~~dG~d~~~DfW~~~~S~~I~PvG 119 (243)
T 2biv_A 60 VNDFKVGMKLEARDP---RNATSVCIATVIGITGARLRLRLDGSDNRNDFWRLVDSPDIQPVG 119 (243)
T ss_dssp CCCCCTTCEEEEEET---TEEEEEEEEEEEEEETTEEEEEETTSCSSSCEEEETTCTTEECTT
T ss_pred cccccCCCEEEEecC---CCCCcEEEEEEEEEeCCEEEEEECCCCCCCCEeecCCCCccccCh
Confidence 356999999999864 45789999999999999999999999988776654 34566664
No 24
>2r58_A Polycomb protein SCM; MBT repeat, sex COMB on midleg, DI-methyl lysine, regulator, developmental protein, metal-binding, nucleus; HET: MLY; 2.00A {Drosophila melanogaster} PDB: 2r57_A* 2r5a_A* 2r5m_A*
Probab=96.16 E-value=0.013 Score=50.70 Aligned_cols=58 Identities=12% Similarity=0.008 Sum_probs=46.4
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEEEEEeccEEEEEEeccCCcceeeecC--CCcccCC
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGCQSTFTEIVPP--ERMRQKN 97 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGdf~vVey~~~d~~~teIV~~--erLR~~n 97 (191)
.-.|.+|+.+||--+ ..+..+|.|+|.++.|+.+.|.|-|+|..|.-.+.. ..|.|++
T Consensus 32 ~~~F~vGMKLEavDp---~~~~~icvATV~~v~g~~l~l~~DG~d~~~DfW~~~~S~~I~PvG 91 (265)
T 2r58_A 32 NNDFKIGMKLEALDP---RNVTSTCIATVVGVLGSRLRLRLDGSDSQNDFWRLVDSTEIHAIG 91 (265)
T ss_dssp CCCCCTTCEEEEEET---TEEEEEEEEEEEEEETTEEEEEETTSCSSCCEEEETTCTTEECTT
T ss_pred ccccccCCEeEEecC---CCCCCEEEEEEEEEeCCEEEEEeCCCCCcCCEeEeCCCCCeeccc
Confidence 356999999999865 458899999999999999999999999877665443 3455553
No 25
>2r58_A Polycomb protein SCM; MBT repeat, sex COMB on midleg, DI-methyl lysine, regulator, developmental protein, metal-binding, nucleus; HET: MLY; 2.00A {Drosophila melanogaster} PDB: 2r57_A* 2r5a_A* 2r5m_A*
Probab=96.07 E-value=0.022 Score=49.16 Aligned_cols=57 Identities=18% Similarity=0.101 Sum_probs=48.2
Q ss_pred CCccCCCeEEEEeecCCCCccceeeEEEEEEeccEEEEEEeccCCcceeeecCC--CcccCC
Q psy985 38 SGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGCQSTFTEIVPPE--RMRQKN 97 (191)
Q Consensus 38 ~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGdf~vVey~~~d~~~teIV~~e--rLR~~n 97 (191)
-.|.+|+.+|+- |...|+-+|.|+|..+.|+.+.|.|.|||..|..++..+ .|.|++
T Consensus 142 ~~F~vGMKLEav---D~~np~~icvATV~~v~g~rl~v~fDGw~~~~D~W~~~~Sp~I~PvG 200 (265)
T 2r58_A 142 NLFKVGQKLEAV---DKKNPQLICCATVDAIKDDQIHVTFDGWRGAFDYWCNYRSRDIFPAG 200 (265)
T ss_dssp CCCCTTCEEEEE---CTTSTTCEEEEEEEEEETTEEEEEETTSCGGGCEEEETTCTTEECTT
T ss_pred cccccCcEEEec---cCCCCCCEEEEEEEEecCCEEEEEeCCCCCcCCEEEECCCCCeecCc
Confidence 469999999985 455678899999999999999999999999998888765 355554
No 26
>3qii_A PHD finger protein 20; tudor domain, structural genomics, structural GE consortium, SGC, transcription regulator; 2.30A {Homo sapiens}
Probab=95.99 E-value=0.015 Score=42.68 Aligned_cols=57 Identities=16% Similarity=0.256 Sum_probs=45.5
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEEEEEecc-EEEEEEeccCCcceeeecCCCcccCCCCCC
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGD-FHVVEYLGCQSTFTEIVPPERMRQKNTNPP 101 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGd-f~vVey~~~d~~~teIV~~erLR~~n~n~p 101 (191)
...|.+||+|.+-- .-|.|++|+|..+.|+ .|.|.|-+ ..++.|....|||...+..
T Consensus 19 ~~~f~vGd~VlArW-----~D~~yYPAkI~sV~~~~~YtV~F~D---G~~etvk~~~IKp~~~~~~ 76 (85)
T 3qii_A 19 SSEFQINEQVLACW-----SDCRFYPAKVTAVNKDGTYTVKFYD---GVVQTVKHIHVKAFSKDQN 76 (85)
T ss_dssp --CCCTTCEEEEEC-----TTSCEEEEEEEEECTTSEEEEEETT---SCEEEEEGGGEEECC----
T ss_pred CcccccCCEEEEEe-----CCCCEeeEEEEEECCCCeEEEEEeC---CCeEEecHHHcccCChhhc
Confidence 57899999999966 3589999999999996 99999974 5799999999999876543
No 27
>2wac_A CG7008-PA; unknown function, tudor, beta-barrel, nuclease domain, tudor P100, SND1, methylated arginine, SDMA, splicing; 2.10A {Drosophila melanogaster}
Probab=95.96 E-value=0.14 Score=40.78 Aligned_cols=144 Identities=14% Similarity=0.144 Sum_probs=83.7
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEEEEEeccEEEEEEeccCCcceeeecCCCcccCCCC---CCCCcCceeEEeec
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGCQSTFTEIVPPERMRQKNTN---PPIDAKTFHKFDIE 113 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGdf~vVey~~~d~~~teIV~~erLR~~n~n---~pi~~~~f~k~~i~ 113 (191)
...+.+|+.+-+....+ -.|++|+|..+.++-+.|.|... ..++.|+..+||+..+. -|.-...+.-.-|+
T Consensus 49 ~~~~~~g~~c~a~~~~d----~~wyRa~V~~v~~~~~~V~~vDy--G~~~~v~~~~l~~l~~~~~~~p~~a~~~~Lagv~ 122 (218)
T 2wac_A 49 SYTPKRGDLVAAQFTLD----NQWYRAKVERVQGSNATVLYIDY--GNKETLPTNRLAALPPAFSSEKPYATEYALALVA 122 (218)
T ss_dssp SCCCCTTCEEEEECTTT----CCEEEEEEEEEETTEEEEEETTT--CCEEEEEGGGEEECCGGGSSSCCSEEEEEETTEE
T ss_pred CccCCcCCEEEEEECCC----CeEEEEEEEEecCCeEEEEEEec--CCeEEEchHHcccCChhhccCCcceeEEEECCEE
Confidence 35788999999976433 37999999999999999999844 45899999999998753 12222222222355
Q ss_pred CChhHHHHHHhhhchHHHHHhhhc--cEEEEc-CCCCe-e-EEEeCc--hhhHhhhhhhhhhhhh-------hHHHHHHH
Q psy985 114 VPLDVQEFAKMEGAHKDFQKAIAA--AIVRYI-PDKGA-L-SVISRD--EACQKRASMIKDMHFR-------NLNQKVVL 179 (191)
Q Consensus 114 VPedLre~~~~~~~h~dF~kaiga--~~v~y~-pe~~~-L-vvls~~--e~~~kRA~mL~dmHfr-------~LrqK~~l 179 (191)
.|++ .+| ...+..-|++.+.. +.+... .+.|. + +.|... ...+ .+.|+..-+-+ .+..-+.-
T Consensus 123 ~p~~-~~w--~~eA~~~l~~lv~~k~v~~~v~~~d~g~~~~V~L~~~~~~~~i-n~~Lv~~G~A~~~~~~~~~~~~~~~~ 198 (218)
T 2wac_A 123 LPTD-NED--KEEALRAFSEDVLNHKVQLNVELKVTGSPNLATLRDPTTKVDF-GKQLVAEGLVLAEQRGERKLKELVDQ 198 (218)
T ss_dssp CCSS-HHH--HHHHHHHHHHHHBTCEEEEEEEECCTTSCEEEEEECTTTCCBH-HHHHHHTTSSEECCCCCGGGHHHHHH
T ss_pred CCCC-cch--HHHHHHHHHHHhcCCEEEEEEEEEcCCceEEEEEEeCCCCccH-HHHHHHCCCcccccccchhHHHHHHH
Confidence 6762 233 23456678887742 333332 22455 4 434321 1122 33455544322 12222334
Q ss_pred hhhhhhhhhcC
Q psy985 180 LKRTEDIDFKN 190 (191)
Q Consensus 180 ~~r~eea~~~~ 190 (191)
+.+.|+.||+.
T Consensus 199 ~~~~e~~Ar~~ 209 (218)
T 2wac_A 199 YKAAQEAARVA 209 (218)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 55677777764
No 28
>3p8d_A Medulloblastoma antigen MU-MB-50.72; tudor domain, lysine-methylated P53 binding, histone binding binding; 2.00A {Homo sapiens}
Probab=95.86 E-value=0.021 Score=40.03 Aligned_cols=57 Identities=18% Similarity=0.274 Sum_probs=45.6
Q ss_pred CCccCCCeEEEEeecCCCCccceeeEEEEEEecc-EEEEEEeccCCcceeeecCCCcccCCCCCCC
Q psy985 38 SGFVENQEVEVFSKATEGESCGWWKVIVKMIKGD-FHVVEYLGCQSTFTEIVPPERMRQKNTNPPI 102 (191)
Q Consensus 38 ~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGd-f~vVey~~~d~~~teIV~~erLR~~n~n~pi 102 (191)
..+.+||+|.+-- .-+.|++|+|..+.|+ .|.|.|-+ ..++.|....|||...+..+
T Consensus 5 ~~~~vGd~vmArW-----~D~~yYpA~I~si~~~~~Y~V~F~d---G~~etvk~~~ikp~~~~~~~ 62 (67)
T 3p8d_A 5 SEFQINEQVLACW-----SDCRFYPAKVTAVNKDGTYTVKFYD---GVVQTVKHIHVKAFSKDQNI 62 (67)
T ss_dssp CCCCTTCEEEEEC-----TTSCEEEEEEEEECTTSEEEEEETT---SCEEEEEGGGEEECC-----
T ss_pred cccccCCEEEEEc-----CCCCEeeEEEEEECCCCeEEEEEeC---CceEEEeHHHcccCCccccc
Confidence 4789999999976 3578999999999997 99999974 57899999999998765433
No 29
>2biv_A SCML2 protein, sex COMB on midleg-like protein 2; MBT, malignant brain tumor, transcription factor; 1.7A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 PDB: 1oi1_A 2vyt_A* 2p0k_A
Probab=95.69 E-value=0.036 Score=47.16 Aligned_cols=51 Identities=16% Similarity=0.185 Sum_probs=45.1
Q ss_pred CCccCCCeEEEEeecCCCCccceeeEEEEEEeccEEEEEEeccCCcceeeecCC
Q psy985 38 SGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGCQSTFTEIVPPE 91 (191)
Q Consensus 38 ~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGdf~vVey~~~d~~~teIV~~e 91 (191)
-.|.+|+.+|+--+ ..|+-+|.|+|..+.|+.+.|.|-|||..|..++..+
T Consensus 170 ~~F~~GmKLEavD~---~~p~~icvATV~~v~g~rl~v~fDgw~~~~D~W~~~d 220 (243)
T 2biv_A 170 NNFKVGMKLEAIDK---KNPYLICPATIGDVKGDEVHITFDGWSGAFDYWCKYD 220 (243)
T ss_dssp CCCCTTCEEEEECT---TSTTCEEEEEEEEEETTEEEEEETTSCGGGCEEEETT
T ss_pred ccccCCCEEEEEcc---CCCCeEEEEEEEEecCCEEEEEECCCCCcCCEEEeCC
Confidence 47999999999865 4578899999999999999999999999998888765
No 30
>2eqk_A Tudor domain-containing protein 4; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.67 E-value=0.026 Score=41.39 Aligned_cols=58 Identities=16% Similarity=0.158 Sum_probs=47.5
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEEEEEeccEEEEEEeccCCcceeeecCCCcccCCCC
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGCQSTFTEIVPPERMRQKNTN 99 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGdf~vVey~~~d~~~teIV~~erLR~~n~n 99 (191)
...+..||-|-|.+..+. .|.+|+|..+.++=- ++-.=.|---.+.|+.++|||..++
T Consensus 19 ~~~~k~g~~vaak~~d~n----~WyRakV~~v~~~~~-veVl~~DyGn~~~V~~~~LR~L~~~ 76 (85)
T 2eqk_A 19 PVKWENDMHCAVKIQDKN----QWRRGQIIRMVTDTL-VEVLLYDVGVELVVNVDCLRKLEEN 76 (85)
T ss_dssp CCCCCSSCEEEEECSSSC----CEEEEEEEEECSSSE-EEEECTTTCCEEEEETTTEEECCHH
T ss_pred ccCccCCCEEEEEeCCCC----eEEEEEEEEecCCCe-EEEEEEccCCEEEEEccccccCCHH
Confidence 578899999999876443 899999999999833 5555568778999999999998754
No 31
>3fdr_A Tudor and KH domain-containing protein; TDRD2, structural genomics, structural genomics consortium, SGC, alternative splicing, RNA-binding; 1.75A {Homo sapiens} SCOP: b.34.9.1
Probab=95.63 E-value=0.027 Score=40.40 Aligned_cols=57 Identities=9% Similarity=0.053 Sum_probs=45.6
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEEEEEecc-EEEEEEeccCCcceeeecCCCcccCCCC
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGD-FHVVEYLGCQSTFTEIVPPERMRQKNTN 99 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGd-f~vVey~~~d~~~teIV~~erLR~~n~n 99 (191)
...+.+||.+-|....+ -.|++|+|..+.++ -+.|.|.+. -.+|.|+...||+..+.
T Consensus 25 ~~~~~~G~~c~a~~~~d----~~wyRA~I~~~~~~~~~~V~fvDy--Gn~e~v~~~~lr~l~~~ 82 (94)
T 3fdr_A 25 DLTVHVGDIVAAPLPTN----GSWYRARVLGTLENGNLDLYFVDF--GDNGDCPLKDLRALRSD 82 (94)
T ss_dssp CCCCCTTCEEEEEETTT----TEEEEEEEEEECTTSCEEEEETTT--CCEEEECGGGCEECCGG
T ss_pred CCCCCCCCEEEEEECCC----CeEEEEEEEEECCCCeEEEEEEcC--CCeEEEEHHHhhhcCHH
Confidence 36789999999865333 36999999999874 788999855 56899999999998643
No 32
>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}
Probab=95.01 E-value=0.054 Score=37.49 Aligned_cols=44 Identities=20% Similarity=0.278 Sum_probs=30.5
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEEEEeccEEEEEEecc-CCcceeeecCC
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGC-QSTFTEIVPPE 91 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGdf~vVey~~~-d~~~teIV~~e 91 (191)
....|..||.|+|+.+.++ -|||.|+. .|.. |+ -++|-+++...
T Consensus 25 ~eLsf~~Gd~i~v~~~~~~---~gWw~g~~---~g~~------G~fP~~yv~~~~~~ 69 (80)
T 2i0n_A 25 SLLPFKRNDIITITFKDQE---NKWFMGQL---NGKE------GSFPVDHVEILLSD 69 (80)
T ss_dssp SSCCBCSSEEEEEEEESSS---SSEEEEEE---TTEE------EEEEGGGEEEESSC
T ss_pred CCcCCCCCCEEEEEEecCC---CCEEEEEE---CCcE------EEechHHEEECCCC
Confidence 5678999999999998754 24999974 3431 22 45677776544
No 33
>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.90 E-value=0.053 Score=38.28 Aligned_cols=51 Identities=18% Similarity=0.371 Sum_probs=35.3
Q ss_pred CCCCCccCCCeEEEEeecCCCCccceeeEEEEEEeccEEEEEEecc-CCcceeeecCCCcccCCC
Q psy985 35 TINSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGC-QSTFTEIVPPERMRQKNT 98 (191)
Q Consensus 35 ~~~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGdf~vVey~~~-d~~~teIV~~erLR~~n~ 98 (191)
+....|..||.|+|..+.+ .|||.|+. .|.. |+ -++|-+.+...-.+..++
T Consensus 31 ~~eLs~~~Gd~i~v~~~~~----~gWw~g~~---~g~~------G~~P~~yv~~~~~~~~~~~~~ 82 (88)
T 2cub_A 31 EDELSLIKGTKVIVMEKCS----DGWWRGSY---NGQV------GWFPSNYVTEEGDSPLGDHVG 82 (88)
T ss_dssp TTBCCCCTTEEEEEEEECT----TSEEEEEE---TTEE------EEEEGGGEEECCCCCSSSCCC
T ss_pred CCCcCCCCCCEEEEEEccC----CCeEEEEE---CCcE------EEEehHHEEECCCcccccCCC
Confidence 3568899999999999874 38999987 4431 21 456777776665555543
No 34
>1oz2_A Lethal(3)malignant brain tumor-like protein; propeller, transcription repressor, three malignant brain TU repeats, transcription; HET: MES; 1.55A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 b.34.9.3 PDB: 1oyx_A* 1oz3_A* 3oq5_A* 2rhi_A* 2rhx_A* 2rjd_A 2rjc_A 2rje_A* 2rjf_A* 3uwn_A* 2pqw_A* 3p8h_A* 2rhu_A* 2rhy_A* 2rhz_A* 2ri3_A* 2ri2_A* 2ri5_A*
Probab=94.70 E-value=0.12 Score=45.65 Aligned_cols=58 Identities=12% Similarity=0.112 Sum_probs=47.6
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEEEEEeccEEEEEEeccCCcceeeecCCC--cccCC
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGCQSTFTEIVPPER--MRQKN 97 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGdf~vVey~~~d~~~teIV~~er--LR~~n 97 (191)
.-.|.+|+.+|+-- ..+|..+|.|+|..+.|+-+.|.|-|||..|.-++..+. |.|++
T Consensus 146 ~~~F~vGmKLEavD---~~np~~icvATV~~v~g~r~~v~~Dg~~~~~D~w~~~~S~~I~PVG 205 (331)
T 1oz2_A 146 PLGFQVGMKLEAVD---RMNPSLVCVASVTDVVDSRFLVHFDNWDDTYDYWCDPSSPYIHPVG 205 (331)
T ss_dssp CTTCCTTCEEEEEC---TTSTTCEEEEEEEEEETTEEEEEETTSCGGGCEEECTTCTTEECTT
T ss_pred ccccccccEEEecc---CCCCCcEEEEEEEEeeCCEEEEEeCCCCCccCEEEecCCCCccCCc
Confidence 34699999999984 456788999999999999888999999998888876643 44554
No 35
>2ldm_A Uncharacterized protein; PHF20, tudor domain, epigenetics, methylated P53, transcript factor, transcription-protein binding complex; HET: M2L; NMR {Homo sapiens}
Probab=93.69 E-value=0.0056 Score=44.45 Aligned_cols=53 Identities=13% Similarity=0.163 Sum_probs=43.2
Q ss_pred CCccCCCeEEEEeecCCCCccceeeEEEEEEec-cEEEEEEeccCCcceeeecCCCcccCCC
Q psy985 38 SGFVENQEVEVFSKATEGESCGWWKVIVKMIKG-DFHVVEYLGCQSTFTEIVPPERMRQKNT 98 (191)
Q Consensus 38 ~~~~egdeVEV~sran~~ep~gWW~a~V~~iKG-df~vVey~~~d~~~teIV~~erLR~~n~ 98 (191)
..+..||.|-+.-. | ..|++|+|..+.+ +.|.|.|.+ -..|.|+.++|||...
T Consensus 5 ~~~kvGd~clAkws--D---g~wY~A~I~~v~~~~~y~V~F~D---Gn~E~V~~s~LrPl~~ 58 (81)
T 2ldm_A 5 SEFQINEQVLASWS--D---SRFYPAKVTAVNKDGTYTVKFYD---GVVQTVKHIHVKAFSK 58 (81)
Confidence 46889999999443 3 2699999999966 489999985 4689999999999854
No 36
>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.64 E-value=0.033 Score=39.41 Aligned_cols=55 Identities=15% Similarity=0.376 Sum_probs=38.8
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEE--EEeccEEEEEEeccCCcceeeecCCCcccCCCCCCC
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVK--MIKGDFHVVEYLGCQSTFTEIVPPERMRQKNTNPPI 102 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~--~iKGdf~vVey~~~d~~~teIV~~erLR~~n~n~pi 102 (191)
....|..||.|+|+.+.+ -|||.|+.. ...|=| -++|-+++.....|.....+|-
T Consensus 32 ~eLsf~~Gd~i~v~~~~~----~~Ww~g~~~~~g~~G~f--------P~~yv~~~~~~~~~~~~~~~p~ 88 (90)
T 2yup_A 32 VELSFRKGEHICLIRKVN----ENWYEGRITGTGRQGIF--------PASYVQVSREPRLRLCDDSGPS 88 (90)
T ss_dssp SBCCCCTTCEEEESSCCC----SSEEEEECTTTCCEEEE--------EGGGEEEEECCCCCCCCCSSCC
T ss_pred CcCCCCCCCEEEEEEEcC----CCeEEEEECCCCCEEEE--------ehHHeEEcCCCccccccCCCCC
Confidence 467899999999998644 589999875 222222 4568888887777776655543
No 37
>3ut1_A Lethal(3)malignant brain tumor-like protein 3; chromatin modification, transcription repression, MBT repeat structural genomics; HET: EPE; 2.05A {Homo sapiens} PDB: 4fl6_A* 1wjs_A
Probab=94.51 E-value=0.089 Score=46.45 Aligned_cols=59 Identities=15% Similarity=0.168 Sum_probs=46.4
Q ss_pred CcccccCCCCCCCCCccCCCeEEEEeecCCCCccceeeEEEEEEeccEEEEEEeccCCcceeee
Q psy985 25 FSMVRLPPRETINSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGCQSTFTEIV 88 (191)
Q Consensus 25 f~~VRlPP~~~~~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGdf~vVey~~~d~~~teIV 88 (191)
|.+++..|.. .-.|.+||.+||--+ ..|...|.|.|.++-|....|.|.|+++++.=.+
T Consensus 24 Fk~~~~~~~~--~~~F~~GMKLE~~D~---~~~~~~~vAtV~~v~G~rl~l~~dg~~~~~dFW~ 82 (324)
T 3ut1_A 24 FKEHQSFPYN--KNGFKVGMKLEGVDP---EHQSVYCVLTVAEVCGYRIKLHFDGYSDCYDFWV 82 (324)
T ss_dssp SCTTTSCCSS--CCCCCTTCEEEEEET---TEEEEEEEEEEEEEETTEEEEEETTSCGGGCEEE
T ss_pred ccCcccCCCc--CCcccCCCEEEEecC---CCCCcEEEEEEEEEECCEEEEEECCCCCCCCEEE
Confidence 7787665532 356999999999854 4578899999999999988999999876554333
No 38
>2diq_A Tudor and KH domain-containing protein; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=94.49 E-value=0.036 Score=40.92 Aligned_cols=55 Identities=9% Similarity=0.022 Sum_probs=44.0
Q ss_pred CCccCCCeEEEEeecCCCCccceeeEEEEEEec-cEEEEEEeccCCcceeeecCCCcccCCC
Q psy985 38 SGFVENQEVEVFSKATEGESCGWWKVIVKMIKG-DFHVVEYLGCQSTFTEIVPPERMRQKNT 98 (191)
Q Consensus 38 ~~~~egdeVEV~sran~~ep~gWW~a~V~~iKG-df~vVey~~~d~~~teIV~~erLR~~n~ 98 (191)
..+.+|+.+-+....+. .|++|+|..+.+ +-+.|.|..+ -.+|.|+...||+..+
T Consensus 31 ~~~~~G~~c~a~~~~d~----~wyRA~V~~~~~~~~~~V~fvDy--Gn~e~v~~~~Lr~l~~ 86 (110)
T 2diq_A 31 LTVHVGDIVAAPLPTNG----SWYRARVLGTLENGNLDLYFVDF--GDNGDCPLKDLRALRS 86 (110)
T ss_dssp CCCCTTCEEEECCTTTC----SCEEEEECCCCSSSCEEEEETTT--CCEEEECGGGCEECCH
T ss_pred CCCCCCCEEEEEECCCC----eEEEEEEEEECCCCeEEEEEEeC--CCeEEEehHHhhcCcH
Confidence 56789999988553332 699999999987 5788999855 5689999999999864
No 39
>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A
Probab=94.43 E-value=0.058 Score=36.65 Aligned_cols=27 Identities=19% Similarity=0.417 Sum_probs=22.8
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
....|.+||.|+|..+.++ |||.|++.
T Consensus 21 ~ELs~~~Gd~i~v~~~~~~----gWw~g~~~ 47 (65)
T 2lj0_A 21 DELELRDGDIVDVMEKCDD----GWFVGTSR 47 (65)
T ss_dssp TBCCBCTTCEEEEEEECTT----SEEEEEET
T ss_pred CCcCCCCCCEEEEeEeCCC----CEEEEEEC
Confidence 4688999999999987664 89999863
No 40
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*
Probab=94.41 E-value=0.07 Score=41.54 Aligned_cols=52 Identities=21% Similarity=0.220 Sum_probs=41.7
Q ss_pred cCCCeEEEEeecCCCCccceeeEEEEEEeccEEEEEEec-cCCcceeeecCCCcccCCCC
Q psy985 41 VENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLG-CQSTFTEIVPPERMRQKNTN 99 (191)
Q Consensus 41 ~egdeVEV~sran~~ep~gWW~a~V~~iKGdf~vVey~~-~d~~~teIV~~erLR~~n~n 99 (191)
-+|+.|||.... -+|++|.|+.+..|=+.|.|.. |.. .+.|+...+|++.+.
T Consensus 3 ~~~~~VEV~~~~-----G~~y~a~V~~v~~d~~~V~f~n~w~~--~~~vp~~~vRlpP~~ 55 (128)
T 3h8z_A 3 FQGLPVEVRGSN-----GAFYKGFVKDVHEDSVTIFFENNWQS--ERQIPFGDVRLPPPA 55 (128)
T ss_dssp TTTCEEEEECTT-----SCEEEEEEEEECSSEEEEEETTCTTC--CEEEEGGGEECCCCC
T ss_pred ccccEEEEecCC-----CCEEEEEEEEEeCCcEEEEEccccCc--ceEechhhEEcCCCc
Confidence 478999999822 4899999999999999999952 322 589999999997643
No 41
>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A
Probab=94.39 E-value=0.048 Score=35.54 Aligned_cols=29 Identities=17% Similarity=0.323 Sum_probs=23.1
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVKMI 68 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~~i 68 (191)
....|..||.|.|..+.++ |||.|+...-
T Consensus 18 ~eLs~~~Gd~i~v~~~~~~----~W~~g~~~g~ 46 (61)
T 1y0m_A 18 DELTFTKSAIIQNVEKQDG----GWWRGDYGGK 46 (61)
T ss_dssp TBCCBCTTCEEEEEECCSS----SEEEEEETTE
T ss_pred CCcCCcCCCEEEEEEecCC----CEEEEEECCe
Confidence 4678999999999998543 8999987433
No 42
>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A
Probab=94.27 E-value=0.085 Score=35.14 Aligned_cols=28 Identities=21% Similarity=0.236 Sum_probs=23.4
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVKM 67 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~~ 67 (191)
....|..||.|+|..+.+ .|||.|+...
T Consensus 22 ~eLsf~~Gd~i~v~~~~~----~~Ww~g~~~~ 49 (68)
T 1tg0_A 22 DDLNFEKDQEIIVTSVED----AEWYFGEYQD 49 (68)
T ss_dssp TBCCBCTTCEEEEEEECS----SSEEEEEEEC
T ss_pred CCCCCCCCCEEEEEEecC----CCeEEEEECC
Confidence 467899999999998754 4899999875
No 43
>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.22 E-value=0.079 Score=36.59 Aligned_cols=27 Identities=15% Similarity=0.416 Sum_probs=22.4
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
....|..||.|.|..+.+ .|||.|+..
T Consensus 25 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~~~ 51 (81)
T 2ysq_A 25 RELAFKAGDVIKVLDASN----KDWWWGQID 51 (81)
T ss_dssp SSCCCCTTCEEEEEECCS----SSEEEEECS
T ss_pred CcCCCCCCCEEEEEEEcC----cCEEEEEEC
Confidence 467899999999998754 589999863
No 44
>2bud_A Males-absent on the first protein; transferase, MOF, HAT, acetyl-transfer, dosage compensation complex, DCC, royal family; NMR {Drosophila melanogaster} SCOP: b.34.13.3
Probab=94.06 E-value=0.16 Score=37.64 Aligned_cols=51 Identities=12% Similarity=0.072 Sum_probs=42.1
Q ss_pred CCeEEEEeecCCCCccceeeEEEEEEec------c-EEEEEEeccCCcceeeecCCCcccCCC
Q psy985 43 NQEVEVFSKATEGESCGWWKVIVKMIKG------D-FHVVEYLGCQSTFTEIVPPERMRQKNT 98 (191)
Q Consensus 43 gdeVEV~sran~~ep~gWW~a~V~~iKG------d-f~vVey~~~d~~~teIV~~erLR~~n~ 98 (191)
|..|-|+.+ + --|..|+|..++- . -|+|-|.||+..+.|+|+.+||+..+.
T Consensus 18 ~e~vlc~~~--d---g~~yeAeIl~ir~~~~~~~~~~YYVHY~g~NkRlDEWV~~~RL~~~~~ 75 (92)
T 2bud_A 18 DKIYFIRRE--D---GTVHRGQVLQSRTTENAAAPDEYYVHYVGLNRRLDGWVGRHRISDNAD 75 (92)
T ss_dssp TSCEEEECT--T---SCEEEEEEEEEECTTTCSSCCEEEEECSSSCTTTCEEEETTTEESCHH
T ss_pred CCEEEEEeC--C---CCEEEEEEEEEeeccCCCCCcEEEEEeCCcccccccccCHHHhchhcc
Confidence 667777763 2 2699999999872 3 799999999999999999999998764
No 45
>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=94.00 E-value=0.14 Score=34.89 Aligned_cols=42 Identities=21% Similarity=0.360 Sum_probs=29.0
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEEEEeccEEEEEEecc-CCcceeeecC
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGC-QSTFTEIVPP 90 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGdf~vVey~~~-d~~~teIV~~ 90 (191)
....|..||.|+|..+.+ -+||.|+. .|. .|+ .++|-+++..
T Consensus 22 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~~---~g~------~G~~P~~yv~~~~~ 64 (78)
T 2yuo_A 22 DELGFRKNDIITIISQKD----EHCWVGEL---NGL------RGWFPAKFVEVLDE 64 (78)
T ss_dssp TBCCBCTTCEEEEEECCS----SSEEEEEE---TTE------EEEEEGGGEEEECC
T ss_pred CCccCCCCCEEEEEEecC----CCEEEEEE---CCC------EEEEehHHEEECCC
Confidence 467899999999998654 48999974 343 122 4456666654
No 46
>1wjr_A KIAA1617 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3
Probab=93.98 E-value=0.059 Score=41.70 Aligned_cols=57 Identities=16% Similarity=0.230 Sum_probs=45.5
Q ss_pred CCccCCCeEEEEeecCCCCccceeeEEEEEEeccEEEEEEeccCC--cceeeecC--CCcccCC
Q psy985 38 SGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGCQS--TFTEIVPP--ERMRQKN 97 (191)
Q Consensus 38 ~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGdf~vVey~~~d~--~~teIV~~--erLR~~n 97 (191)
-.|.+|+.+|+--+.| |..-|.|.|..+.|....|.|.|||. .|.-.+.. ..|.|+.
T Consensus 10 ~~f~~GmKLEa~D~~~---p~~~~vAtV~~v~g~rl~l~~dG~~~~~~~D~W~~~~s~~I~PvG 70 (127)
T 1wjr_A 10 DLITVGSLIELQDSQN---PFQYWIVSVIENVGGRLRLRYVGLEDTESYDQWLFYLDYRLRPVG 70 (127)
T ss_dssp HHCCTTCEEEEECSSC---SSCEEEEECCCEETTEEEECBTTCSSCCSSCEEEETTCSSCBCTT
T ss_pred hhccCCCEeEEecCCC---CCcEEEEEEeeeeCCEEEEEecCCCCCCCCCEeEeCCCCCccccC
Confidence 3689999999986654 68899999999999999999999997 56555543 3455553
No 47
>3bdl_A Staphylococcal nuclease domain-containing protein 1; staphylococcal nuclease OB fold, tudor domain, cytoplasm, HOST-virus interaction, nucleus; HET: CIT; 1.90A {Homo sapiens}
Probab=93.91 E-value=0.56 Score=43.53 Aligned_cols=143 Identities=12% Similarity=0.126 Sum_probs=82.2
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEEEEEec-cEEEEEEeccCCcceeeecCCCcccCCCCC-----CCCcCceeEE
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIVKMIKG-DFHVVEYLGCQSTFTEIVPPERMRQKNTNP-----PIDAKTFHKF 110 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKG-df~vVey~~~d~~~teIV~~erLR~~n~n~-----pi~~~~f~k~ 110 (191)
...+..|+.+-+... +. .|++|+|..+.+ +-+.|.|..+ -.++.|+...||+..+.= |.-...+.-.
T Consensus 409 ~~~~~~G~~c~a~~~-d~----~wyRa~I~~v~~~~~~~V~fvDy--Gn~e~v~~~~Lr~l~~~f~~l~lP~qA~~c~La 481 (570)
T 3bdl_A 409 SYAPRRGEFCIAKFV-DG----EWYRARVEKVESPAKIHVFYIDY--GNREVLPSTRLGTLSPAFSTRVLPAQATEYAFA 481 (570)
T ss_dssp CCCCCTTCEEEEECT-TS----CEEEEEEEEEEETTEEEEEETTT--CCEEEECGGGEECCCGGGSTTTSCCCCEEEEET
T ss_pred CcCCCcCCEEEEEEC-CC----CEEEEEEEEEcCCCeEEEEEEeC--CCeEEEEHHHCccCCHHHhcCCCCcceEEEEEC
Confidence 367889999999664 32 599999999998 7889999844 568999999999987531 2222222222
Q ss_pred eecCChhHHHHHHhhhchHHHHHhhhc----cEEEEcCCCCeeEEEeCchhhH-hhhhhhhhhhh-------hhHHHHHH
Q psy985 111 DIEVPLDVQEFAKMEGAHKDFQKAIAA----AIVRYIPDKGALSVISRDEACQ-KRASMIKDMHF-------RNLNQKVV 178 (191)
Q Consensus 111 ~i~VPedLre~~~~~~~h~dF~kaiga----~~v~y~pe~~~Lvvls~~e~~~-kRA~mL~dmHf-------r~LrqK~~ 178 (191)
-|..|.+ .+| .+.+..-|+..+.. +.|.+.-+....|.|......+ =...|+..-|- +.|..-+.
T Consensus 482 ~v~pp~~-~~w--~~ea~~~f~~lv~~k~l~~~V~~~~~~~~~V~L~~~~~~~sIn~~Lv~~G~A~~~~~~~~~~~~~~~ 558 (570)
T 3bdl_A 482 FIQVPQD-DDA--RTDAVDSVVRDIQNTQCLLNVEHLSAGCPHVTLQFADSKGDVGLGLVKEGLVMVEVRKEKQFQKVIT 558 (570)
T ss_dssp TEECCSS-HHH--HHHHHHHHHHHHTTEEEEEEEEECCSSSCEEEEEETTTCCBHHHHHHHTTSSEECCCCSGGGHHHHH
T ss_pred CeEcCCC-CCC--cHHHHHHHHHHhCCCEEEEEEEEEeCCcEEEEEEECCCCccHHHHHHHCCCeEcchhhhhhHHHHHH
Confidence 2334542 233 34456677777632 3343333333444443321111 13344444432 33444455
Q ss_pred Hhhhhhhhhhc
Q psy985 179 LLKRTEDIDFK 189 (191)
Q Consensus 179 l~~r~eea~~~ 189 (191)
-|...+|.||+
T Consensus 559 ~l~~~q~~Ak~ 569 (570)
T 3bdl_A 559 EYLNAQESAKS 569 (570)
T ss_dssp HHHHHHHTC--
T ss_pred HHHHHHHHHhc
Confidence 56666777775
No 48
>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.90 E-value=0.17 Score=34.93 Aligned_cols=26 Identities=35% Similarity=0.681 Sum_probs=22.0
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.+ .|||.|+.
T Consensus 23 ~eLs~~~Gd~i~vl~~~~----~gWw~g~~ 48 (80)
T 2ekh_A 23 SEISFPAGVEVQVLEKQE----SGWWYVRF 48 (80)
T ss_dssp TSCCBCTTCEEEEEEECT----TSEEEEEE
T ss_pred CccCcCCCCEEEEEEeCC----CCeEEEEE
Confidence 467899999999998764 48999985
No 49
>3ntk_A Maternal protein tudor; tudor domain, OB-fold, GERM cell formation, transcription; 1.80A {Drosophila melanogaster} PDB: 3nth_A* 3nti_A*
Probab=93.88 E-value=0.4 Score=37.66 Aligned_cols=104 Identities=10% Similarity=0.074 Sum_probs=71.3
Q ss_pred CCccCCCeEEEEeecCCCCccceeeEEEEEEecc-EEEEEEeccCCcceeeecCCCcccCCCC---CCCCcCceeEEeec
Q psy985 38 SGFVENQEVEVFSKATEGESCGWWKVIVKMIKGD-FHVVEYLGCQSTFTEIVPPERMRQKNTN---PPIDAKTFHKFDIE 113 (191)
Q Consensus 38 ~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGd-f~vVey~~~d~~~teIV~~erLR~~n~n---~pi~~~~f~k~~i~ 113 (191)
..+.+|+-+-+....++ .|++|+|..+.++ .+.|.|.++-+ +++| .+||+..+. -|.=+....-.-|.
T Consensus 46 ~~~~~G~~c~A~~~~d~----~wyRa~I~~~~~~~~~~V~fvDyGn--~~~v--~~lr~l~~~f~~lP~qA~~c~L~~v~ 117 (169)
T 3ntk_A 46 SDLKEGALCVAQFPEDE----VFYRAQIRKVLDDGKCEVHFIDFGN--NAVT--QQFRQLPEELAKPARYSRHCELDAST 117 (169)
T ss_dssp CCCCTTCEEEEEETTTT----EEEEEEEEEECSTTCEEEEETTTTE--EEEE--SCEECCCHHHHSSCCSSEEEEECGGG
T ss_pred CCCCCCCEEEEEECCCC----cEEEEEEEEECCCCEEEEEEEecCC--eEEh--hhhhccCHHHhhCCceeEEEEECCcC
Confidence 47899999998653332 6999999999875 68899986654 4555 799998754 34444344444467
Q ss_pred CChhHHHHHHhhhchHHHHHhhh----ccEEEEcCCCCee-EEEeCc
Q psy985 114 VPLDVQEFAKMEGAHKDFQKAIA----AAIVRYIPDKGAL-SVISRD 155 (191)
Q Consensus 114 VPedLre~~~~~~~h~dF~kaig----a~~v~y~pe~~~L-vvls~~ 155 (191)
.|.+ ..++-..|++.+- .+.|.|..+.... |.|-..
T Consensus 118 ~~~~------~~ea~~~f~~l~~~k~l~~~V~~~~~~~~~~V~L~~~ 158 (169)
T 3ntk_A 118 ISKC------DAALLQSFIDTRFSETFQVEILATKGTGTHVVRLFYQ 158 (169)
T ss_dssp SCHH------HHHHHHHHHHTTTTSEEEEEEEEECTTSCEEEEEEET
T ss_pred CCCC------hHHHHHHHHHHhCCCeEEEEEEEecCCCCEEEEEEEC
Confidence 7877 5566677888774 3567787666666 656543
No 50
>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.82 E-value=0.096 Score=36.84 Aligned_cols=46 Identities=22% Similarity=0.236 Sum_probs=31.8
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEEEEeccEEEEEEecc-CCcceeeecCCCcc
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGC-QSTFTEIVPPERMR 94 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGdf~vVey~~~-d~~~teIV~~erLR 94 (191)
....|..||.|.|..+.+ -|||.|.+ .|.. |+ -++|-+++..+..+
T Consensus 33 ~eLsf~~Gd~i~v~~~~~----~~Ww~g~~---~g~~------G~fP~~yv~~~~~~~~~ 79 (88)
T 2dbk_A 33 TALALEVGDIVKVTRMNI----NGQWEGEV---NGRK------GLFPFTHVKIFDPQNPD 79 (88)
T ss_dssp SBCCBCTTCEEEEEEECT----TSCEEEEC---SSCE------EEECTTTEEECCSSCCT
T ss_pred CcccCCCCCEEEEEEecC----CCEEEEEe---CCCE------EEEehHHeEECCCCCcc
Confidence 457899999999998853 58999965 3431 22 56677777655433
No 51
>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A
Probab=93.80 E-value=0.078 Score=34.07 Aligned_cols=26 Identities=27% Similarity=0.558 Sum_probs=22.0
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.+ .|||.|+.
T Consensus 16 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~~ 41 (58)
T 1uti_A 16 DELGFRSGEVVEVLDSSN----PSWWTGRL 41 (58)
T ss_dssp TBCCBCTTCEEEEEECCS----SSEEEEEE
T ss_pred CCCCCCCCCEEEEEEECC----CCEEEEEE
Confidence 467899999999998743 58999986
No 52
>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.77 E-value=0.059 Score=36.90 Aligned_cols=28 Identities=18% Similarity=0.298 Sum_probs=23.2
Q ss_pred CCCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 35 TINSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 35 ~~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
.....|..||.|+|+.+.++ -|||.|++
T Consensus 28 ~~eLsf~~Gd~i~v~~~~~~---~gWw~g~~ 55 (76)
T 2csi_A 28 EAELTFCTGDIITVFGEIDE---DGFYYGEL 55 (76)
T ss_dssp TTSCCCCTTCEEEEESSCCS---SSEEEEEE
T ss_pred CCcccCCCCCEEEEeEecCC---CCeEEEEE
Confidence 45788999999999997653 48999986
No 53
>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=93.61 E-value=0.17 Score=34.61 Aligned_cols=27 Identities=22% Similarity=0.532 Sum_probs=22.9
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
....|..||.|+|..+.+ .|||.|+..
T Consensus 22 ~eLs~~~Gd~i~v~~~~~----~gWw~g~~~ 48 (80)
T 1ue9_A 22 EQLSLAPGQLILILKKNT----SGWWQGELQ 48 (80)
T ss_dssp TBCCCCTTCEEEEEEECS----SSEEEEEEC
T ss_pred CCCCCCCCCEEEEEEecC----CCcEEEEEC
Confidence 467899999999999854 589999876
No 54
>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13, protein-protein interaction, structural genomics; NMR {Mus musculus}
Probab=93.57 E-value=0.057 Score=38.36 Aligned_cols=54 Identities=17% Similarity=0.291 Sum_probs=36.5
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEEEEeccEEEEEEecc-CCcceeeecCCCcccCC
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGC-QSTFTEIVPPERMRQKN 97 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGdf~vVey~~~-d~~~teIV~~erLR~~n 97 (191)
....|..||.|.|+.+.++..-.|||.|++. |. -.|+ .++|-+++....-+..+
T Consensus 32 ~eLsf~~Gd~i~v~~~~~~~~~~gWw~g~~~---~~-----~~G~~P~~yv~~~~~~~~~~~~ 86 (93)
T 1wxu_A 32 EEISFRAGDMLNLALKEQQPKVRGWLLASLD---GQ-----TTGLIPANYVKILGKRRGRKTI 86 (93)
T ss_dssp SBCCBCSSCBCEECCTTTSCSCSSCEEEESS---SS-----SCEEECSTTEEECCCBCCSTTT
T ss_pred CccCcCCCCEEEEEECCCCCCCCCcEEEEeC---Cc-----CEEEEehHHEEEcCCccccCCC
Confidence 4678999999999998765444799999743 32 0122 56677777666555444
No 55
>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.54 E-value=0.091 Score=35.07 Aligned_cols=26 Identities=19% Similarity=0.230 Sum_probs=21.5
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.+ .|||.|+.
T Consensus 22 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~~ 47 (68)
T 2dmo_A 22 EELQVMPGNIVFVLKKGN----DNWATVMF 47 (68)
T ss_dssp SSCCCCTTCEEEECEECS----SSCEEEEE
T ss_pred CCCCCCCCCEEEEEEeCC----CCEEEEEe
Confidence 468899999999998755 48999964
No 56
>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A
Probab=93.52 E-value=0.079 Score=35.29 Aligned_cols=27 Identities=19% Similarity=0.166 Sum_probs=21.9
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
....|..||.|+|..+.+ .|||.|+..
T Consensus 18 ~eLsf~~Gd~i~v~~~~~----~~Ww~g~~~ 44 (67)
T 2bzy_A 18 TALALEVGDIVKVTRMNI----NGQWEGEVN 44 (67)
T ss_dssp TBCCBCTTCEEEEEEECS----SSEEEEEET
T ss_pred CccccCCCCEEEEEEecC----CCeEEEEeC
Confidence 467899999999998853 489999653
No 57
>1oz2_A Lethal(3)malignant brain tumor-like protein; propeller, transcription repressor, three malignant brain TU repeats, transcription; HET: MES; 1.55A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 b.34.9.3 PDB: 1oyx_A* 1oz3_A* 3oq5_A* 2rhi_A* 2rhx_A* 2rjd_A 2rjc_A 2rje_A* 2rjf_A* 3uwn_A* 2pqw_A* 3p8h_A* 2rhu_A* 2rhy_A* 2rhz_A* 2ri3_A* 2ri2_A* 2ri5_A*
Probab=93.47 E-value=0.14 Score=45.16 Aligned_cols=52 Identities=10% Similarity=0.151 Sum_probs=45.0
Q ss_pred CCccCCCeEEEEeecCCCCccceeeEEEEEEeccEEEEEEeccCCcceeeecCCC
Q psy985 38 SGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGCQSTFTEIVPPER 92 (191)
Q Consensus 38 ~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGdf~vVey~~~d~~~teIV~~er 92 (191)
..|.+|+.+|+--+ .+|.....|+|..++|+.+-|.|-||+..|..+|..+.
T Consensus 251 ~~F~~gmKLEavD~---~~p~~ic~AtV~~v~~~~l~v~fDgw~~~~d~w~~~dS 302 (331)
T 1oz2_A 251 HSFLVNMKLEAVDR---RNPALIRVASVEDVEDHRIKIHFDGWSHGYDFWIDADH 302 (331)
T ss_dssp CCCCTTCEEEEECS---SSTTCEEEEEEEEECSSEEEEEETTBCGGGCEEEETTC
T ss_pred cccccCceeEeecc---cCCCcEEeeEEEEEcCCEEEEEeCCCCCcCCEEEECCC
Confidence 46899999999866 45677889999999999999999999999988886553
No 58
>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.44 E-value=0.16 Score=34.70 Aligned_cols=49 Identities=18% Similarity=0.353 Sum_probs=34.1
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEEEEeccEEEEEEecc-CCcceeeecCCCcccCC
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGC-QSTFTEIVPPERMRQKN 97 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGdf~vVey~~~-d~~~teIV~~erLR~~n 97 (191)
....|..||.|+|+.+.+ .|||.|+. .|.- |+ .++|-+++....-++..
T Consensus 22 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~~---~g~~------G~~P~~yv~~~~~~~~~~~~ 71 (79)
T 2yun_A 22 DELNLEKGDIVIIHEKKE----EGWWFGSL---NGKK------GHFPAAYVEELPSNAGNTAT 71 (79)
T ss_dssp TBCCBCTTCEEEEEECCS----SSCEEEES---SSCE------EEECSTTEEEESSCSSCCCC
T ss_pred CCcCCCCCCEEEEEEcCC----CCEEEEEE---CCCE------EEEEhHHeEECCCCCCCCCC
Confidence 467899999999998654 48999984 4431 22 55677777766555544
No 59
>2pqh_A Spectrin alpha chain, brain; SH3 domain, chimera, , structural protein; 1.75A {Gallus gallus}
Probab=93.43 E-value=0.11 Score=35.81 Aligned_cols=26 Identities=19% Similarity=0.472 Sum_probs=22.0
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.+ .|||.|+.
T Consensus 17 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~~ 42 (80)
T 2pqh_A 17 REVTMKKGDILTLLNSTN----KDWWKVEV 42 (80)
T ss_dssp TBCCBCTTCEEEEEECCS----SSEEEEEE
T ss_pred CccCCCCCCEEEEEEecC----CCEEEEEE
Confidence 467899999999999754 57999987
No 60
>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.37 E-value=0.22 Score=34.92 Aligned_cols=27 Identities=19% Similarity=0.406 Sum_probs=22.2
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
....|..||.|+|+.+.+ .|||.|+..
T Consensus 32 ~eLsf~~Gd~i~v~~~~~----~~Ww~g~~~ 58 (88)
T 1x2q_A 32 NELTFKHGEIIIVLDDSD----ANWWKGENH 58 (88)
T ss_dssp SCCCCCSSCEEEEEECSC----SSSEEEEET
T ss_pred CccCCCCCCEEEEEEeCC----CCEEEEEEC
Confidence 467899999999998643 489999864
No 61
>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A
Probab=93.36 E-value=0.083 Score=34.02 Aligned_cols=27 Identities=22% Similarity=0.386 Sum_probs=22.5
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
....|..||.|.|..+.+ .|||.|+..
T Consensus 15 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~~~ 41 (58)
T 1jo8_A 15 NELTFVENDKIINIEFVD----DDWWLGELE 41 (58)
T ss_dssp TBCCBCTTCEEEEEECCS----SSEEEEEET
T ss_pred CCcccCCCCEEEEEEecC----CCcEEEEEC
Confidence 467899999999999754 489999875
No 62
>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=93.28 E-value=0.087 Score=37.07 Aligned_cols=57 Identities=18% Similarity=0.388 Sum_probs=38.4
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEEEEeccEEEEEEecc-CCcceeeecCCCcccCCCCCCC
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGC-QSTFTEIVPPERMRQKNTNPPI 102 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGdf~vVey~~~-d~~~teIV~~erLR~~n~n~pi 102 (191)
....|..||.|+|+.+.+ .-.|||.|+. ..|.. |+ -.+|-+++....-++..+..|.
T Consensus 32 ~eLs~~~Gd~i~v~~~~~--~~~~Ww~g~~--~~g~~------G~~P~~yv~~~~~~~~~~~~~~~~s 89 (91)
T 1wx6_A 32 EELNFEKGETMEVIEKPE--NDPEWWKCKN--ARGQV------GLVPKNYVVVLSDGPALHPAHSGPS 89 (91)
T ss_dssp SBCCCCTTCEEEEEECCS--SCTTEEEEEC--TTCCE------EEEEGGGEEEEEESSSCSCCCSCSC
T ss_pred CcccCCCCCEEEEEECCC--CCCCcEEEEe--CCCCE------EEEchHHEEECCCcCCCCCCCCCCC
Confidence 467899999999999742 2458999972 23432 22 4567888887777766655443
No 63
>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A
Probab=93.27 E-value=0.11 Score=33.75 Aligned_cols=26 Identities=15% Similarity=0.332 Sum_probs=22.0
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.+ .|||.|+.
T Consensus 19 ~eLs~~~Gd~i~v~~~~~----~~W~~g~~ 44 (60)
T 1w70_A 19 LELNFKAGDVIFLLSRIN----KDWLEGTV 44 (60)
T ss_dssp TBCCBCTTCEEEEEEECS----SSEEEEEE
T ss_pred CCccCCCCCEEEEEEeCC----CCeEEEEE
Confidence 467899999999999864 58999985
No 64
>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A
Probab=93.23 E-value=0.2 Score=32.63 Aligned_cols=27 Identities=22% Similarity=0.494 Sum_probs=23.0
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
....|..||.|.|..+.+ .|||.|+..
T Consensus 16 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~~~ 42 (65)
T 2oaw_A 16 REVTMKKGDILTLLNSTN----KDWWKVEVK 42 (65)
T ss_dssp TBCCBCTTCEEEEEECCS----SSEEEEEEE
T ss_pred CCCCCCCCCEEEEEEcCC----CCEEEEEEc
Confidence 467899999999999754 589999887
No 65
>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1
Probab=93.16 E-value=0.13 Score=36.28 Aligned_cols=25 Identities=16% Similarity=0.445 Sum_probs=20.9
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVI 64 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~ 64 (191)
....|..||.|+|..+.+ .|||.|.
T Consensus 32 ~eLsf~~Gd~i~Vl~~~~----~gWw~g~ 56 (83)
T 1neg_A 32 REVTMKKGDILTLLNSTN----KDWWKVE 56 (83)
T ss_dssp TBCCBCTTCEEEEEECCS----SSEEEEE
T ss_pred CccccCCCCEEEEEEecC----CCEEEEE
Confidence 467899999999999754 3899994
No 66
>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.14 E-value=0.14 Score=36.75 Aligned_cols=47 Identities=13% Similarity=0.235 Sum_probs=31.5
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEEEEeccEEEEEEecc-CCcceeeecCCCcc
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGC-QSTFTEIVPPERMR 94 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGdf~vVey~~~-d~~~teIV~~erLR 94 (191)
....|..||.|+|+.+.++ -|||.|++ .|.. |+ -++|-+.+..+.-.
T Consensus 40 ~eLsf~~Gd~i~vl~~~~~---~gWw~g~~---~g~~------G~~P~~yv~~~~~~~~~ 87 (97)
T 2csq_A 40 EELPFKEGQIIKVYGDKDA---DGFYRGET---CARL------GLIPCNMVSEIQADDEE 87 (97)
T ss_dssp TBCCBCTTCEEEEEEEECT---TCEEEEEE---TTEE------EEEETTTSEECCCCSCC
T ss_pred CccCCCCCCEEEEEEecCC---CCeEEEEE---CCcE------EEEehHHeEECCCCchh
Confidence 4678999999999987653 57999987 3431 22 44566666544333
No 67
>2lx7_A GAS-7, growth arrest-specific protein 7; structural genomics, northeast structural genomics consortiu target HR8574A, PSI-biology; NMR {Homo sapiens}
Probab=93.13 E-value=0.061 Score=36.16 Aligned_cols=25 Identities=16% Similarity=0.494 Sum_probs=20.9
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
...|.+||.|+|..+.++ |||.|+.
T Consensus 20 ~Ls~~~Gd~i~v~~~~~~----~Ww~g~~ 44 (60)
T 2lx7_A 20 GLRFAAGELITLLQVPDG----GWWEGEK 44 (60)
T ss_dssp CCCCCTTCEEEBSCCCTT----SCEEEEC
T ss_pred CccCCCCCEEEEeEecCC----CeEEEEe
Confidence 478999999999876654 8999975
No 68
>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=93.01 E-value=0.074 Score=34.74 Aligned_cols=26 Identities=23% Similarity=0.257 Sum_probs=21.7
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|.|..+.+ .|||.|+.
T Consensus 20 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~~ 45 (62)
T 1k4u_S 20 EDLEFQEGDIILVLSKVN----EEWLEGES 45 (62)
T ss_dssp SBCCBCSSCEEEEEEESS----SSCEEEEC
T ss_pred CCccCCCCCEEEEEEeCC----CCEEEEEE
Confidence 467899999999999854 38999983
No 69
>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A
Probab=92.98 E-value=0.15 Score=33.94 Aligned_cols=29 Identities=10% Similarity=0.124 Sum_probs=23.4
Q ss_pred CCCCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 34 ETINSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 34 ~~~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
.+....|..||.|+|..+.+ .|||.|+..
T Consensus 16 ~~~eLs~~~Gd~i~v~~~~~----~~W~~g~~~ 44 (69)
T 1ruw_A 16 SSSELPLKKGDIVFISRDEP----SGWSLAKLL 44 (69)
T ss_dssp CTTBCCBCTTCEEEEEEECT----TSEEEEEET
T ss_pred CCCcccCCCCCEEEEEEecC----CCeEEEEEC
Confidence 34578899999999998764 489999765
No 70
>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}
Probab=92.93 E-value=0.11 Score=35.01 Aligned_cols=26 Identities=19% Similarity=0.493 Sum_probs=22.0
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.++ |||.|+.
T Consensus 18 ~eLsf~~Gd~i~v~~~~~~----~Ww~g~~ 43 (68)
T 2ew3_A 18 GELGFKEGDIITLTNQIDE----NWYEGMI 43 (68)
T ss_dssp TBCCBCTTCEEEEEEESSS----SEEEEEE
T ss_pred CccCCCCCCEEEEEEecCC----CEEEEEE
Confidence 4678999999999997643 8999986
No 71
>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}
Probab=92.81 E-value=0.088 Score=34.21 Aligned_cols=26 Identities=19% Similarity=0.534 Sum_probs=22.1
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|.|..+.++ |||.|+.
T Consensus 21 ~eLs~~~Gd~i~v~~~~~~----~Ww~g~~ 46 (60)
T 2gnc_A 21 RELSFKKGASLLLYHRASE----DWWEGRH 46 (60)
T ss_dssp TBCCBCTTCEEEEEEEEET----TEEEEEE
T ss_pred CCcCCCCCCEEEEEEecCC----CEEEEEE
Confidence 4678999999999998653 8999987
No 72
>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1
Probab=92.80 E-value=0.12 Score=33.81 Aligned_cols=27 Identities=15% Similarity=0.416 Sum_probs=22.2
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
....|..||.|+|..+.+ .|||.|+..
T Consensus 20 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~~~ 46 (62)
T 1uj0_A 20 NELTFKHGELITVLDDSD----ANWWQGENH 46 (62)
T ss_dssp TBCCBCTTCEEEEEECCS----SSEEEEEET
T ss_pred CCcCCCCCCEEEEEEeCC----CCEEEEEEC
Confidence 467899999999998643 589999864
No 73
>3ut1_A Lethal(3)malignant brain tumor-like protein 3; chromatin modification, transcription repression, MBT repeat structural genomics; HET: EPE; 2.05A {Homo sapiens} PDB: 4fl6_A* 1wjs_A
Probab=92.74 E-value=0.29 Score=43.16 Aligned_cols=52 Identities=15% Similarity=0.170 Sum_probs=44.4
Q ss_pred CCccCCCeEEEEeecCCCCccceeeEEEEEEeccEEEEEEeccCCcceeeecCCC
Q psy985 38 SGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGCQSTFTEIVPPER 92 (191)
Q Consensus 38 ~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGdf~vVey~~~d~~~teIV~~er 92 (191)
..|.+|+.+|+--+-| |.--+.|+|..++|....|.|-||+.+|..++..+.
T Consensus 246 ~~F~~gmkLEAvD~~~---p~licvATV~~v~g~~l~v~fDgw~~~~d~w~~~~S 297 (324)
T 3ut1_A 246 HGFQKKMKLEVVDKRN---PMFIRVATVADTDDHRVKVHFDGWNNCYDYWIDADS 297 (324)
T ss_dssp CCCCTTCEEEEECSSS---TTCEEEEEEEEECSSEEEEEETTSCGGGCEEEETTC
T ss_pred ccCCCCCeeeccCCCC---CCceeEEEEEEecCCEEEEEeCCCCCCCCEEEeCCC
Confidence 4689999999987655 556669999999999999999999999988887654
No 74
>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A
Probab=92.73 E-value=0.12 Score=33.74 Aligned_cols=26 Identities=15% Similarity=0.434 Sum_probs=21.7
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|.|..+.+ .|||.|+.
T Consensus 24 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~~ 49 (65)
T 3ulr_B 24 DEISFDPDDIITNIEMID----DGWWRGVC 49 (65)
T ss_dssp TBCCBCTTCEEEEEECCS----SSEEEEEE
T ss_pred CEeeEecCCEEEEEEecC----CCEEEEEE
Confidence 467899999999998764 38999984
No 75
>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A
Probab=92.65 E-value=0.14 Score=33.85 Aligned_cols=28 Identities=11% Similarity=0.438 Sum_probs=22.9
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVKM 67 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~~ 67 (191)
....|..||.|+|..+.++ |||.|+...
T Consensus 21 ~eLs~~~Gd~i~v~~~~~~----~Ww~g~~~~ 48 (67)
T 2o9s_A 21 VEMSFRKGERITLLRQVDE----NWYEGRIPG 48 (67)
T ss_dssp TBCCBCTTCEEEEEEECSS----SEEEEECTT
T ss_pred CccCCCCCCEEEEEEecCC----CEEEEEECC
Confidence 4678999999999987543 899998764
No 76
>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.65 E-value=0.15 Score=34.35 Aligned_cols=26 Identities=15% Similarity=0.528 Sum_probs=22.1
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.++ |||.|+.
T Consensus 24 ~eLs~~~Gd~i~v~~~~~~----~Ww~g~~ 49 (72)
T 2dl8_A 24 RELSFKKGASLLLYQRASD----DWWEGRH 49 (72)
T ss_dssp SBCCBCTTCEEEEEEEEET----TEEEEEE
T ss_pred CEeccCCCCEEEEEeecCC----CEEEEEE
Confidence 4678999999999998643 8999987
No 77
>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=92.64 E-value=0.12 Score=35.39 Aligned_cols=29 Identities=24% Similarity=0.597 Sum_probs=23.8
Q ss_pred CCCccCCCeEEEEeecCC-CCccceeeEEE
Q psy985 37 NSGFVENQEVEVFSKATE-GESCGWWKVIV 65 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~-~ep~gWW~a~V 65 (191)
...|..||.|+|..+.++ ....|||.|+.
T Consensus 24 ELsf~~Gd~i~Vl~~~~~~~~~~gWW~g~~ 53 (69)
T 1nm7_A 24 EVALKKGDLMAILSKKDPLGRDSDWWKVRT 53 (69)
T ss_dssp CCCCCTTCEEEECCSSSSSCCSSSCEEEEE
T ss_pred ccCCCCCCEEEEEecCCCCCCCCCeeEEEe
Confidence 678999999999998763 33569999986
No 78
>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A
Probab=92.59 E-value=0.16 Score=32.40 Aligned_cols=25 Identities=16% Similarity=0.395 Sum_probs=21.1
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVI 64 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~ 64 (191)
....|..||.|+|..+.+ .|||.|+
T Consensus 16 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~ 40 (57)
T 1cka_A 16 EDLPFKKGDILRIRDKPE----EQWWNAE 40 (57)
T ss_dssp TBCCBCTTCEEEEEECSS----SSEEEEE
T ss_pred CCCCCCCCCEEEEEEecC----CCcEEEE
Confidence 467899999999999754 5899997
No 79
>3o5z_A Phosphatidylinositol 3-kinase regulatory subunit; SRC homology 3 domain, protein binding; 2.01A {Homo sapiens} SCOP: b.34.2.0 PDB: 2kt1_A
Probab=92.51 E-value=0.035 Score=39.54 Aligned_cols=49 Identities=22% Similarity=0.346 Sum_probs=31.5
Q ss_pred CCCCccCCCeEEEEeecC---------CCCcc--ceeeEEEE--EEeccEEEEEEeccCCcceeeecCCC
Q psy985 36 INSGFVENQEVEVFSKAT---------EGESC--GWWKVIVK--MIKGDFHVVEYLGCQSTFTEIVPPER 92 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran---------~~ep~--gWW~a~V~--~iKGdf~vVey~~~d~~~teIV~~er 92 (191)
....|.+||.|+|..+.. +.... |||.|+.. .-.|-| .++|.++++...
T Consensus 26 ~ELsf~~GD~I~V~~~~~~~l~~~~~~~~~~~~~gW~~G~~~~~g~~G~f--------P~nyVe~i~~~~ 87 (90)
T 3o5z_A 26 EDLELLPGDVLVVSRAALQALGVAEGGERCPQSVGWMPGLNERTRQRGDF--------PGTYVEFLGPVA 87 (90)
T ss_dssp TBCCBCTTCEEEEEHHHHHHTTCCTTGGGCHHHHCEEEEEETTTCCEEEE--------EGGGEEEEEEEC
T ss_pred CccCCcCCCEEEEEeccccccccccccccCCCCCCceEEEeCCCCCEEEe--------ehHHEEEecccc
Confidence 468899999999986521 33344 89999852 222322 456777776543
No 80
>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A
Probab=92.48 E-value=0.18 Score=32.92 Aligned_cols=26 Identities=19% Similarity=0.472 Sum_probs=21.4
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|.|..+.+ .+||.|++
T Consensus 36 ~eLsf~~Gd~i~v~~~~~----~~Ww~g~~ 61 (62)
T 1g2b_A 36 REVTMKKGDILTLLNSTN----KDWWKVEV 61 (62)
T ss_dssp TBCCBCTTCEEEEEECCS----SSEEEEEE
T ss_pred CccCCCCCCEEEEEEecC----CCEEEEEe
Confidence 456789999999999754 58999975
No 81
>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}
Probab=92.46 E-value=0.11 Score=34.62 Aligned_cols=27 Identities=15% Similarity=0.159 Sum_probs=21.8
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
....|..||.|.|..+.+ .|||.|+..
T Consensus 23 ~eLs~~~Gd~i~v~~~~~----~gWw~g~~~ 49 (67)
T 2eyx_A 23 TALALEVGELVKVTKINV----SGQWEGECN 49 (67)
T ss_dssp SBCCBCSSEEEEEEEECT----TSEEEEEET
T ss_pred CccccCCCCEEEEEEecC----CCEEEEEEC
Confidence 467899999999998753 589999653
No 82
>3e9g_A Chromatin modification-related protein EAF3; chromatin remodeling, chromo domain, transcription factor, transcription regulation; 2.50A {Saccharomyces cerevisiae} PDB: 2k3x_A 3e9f_A*
Probab=92.44 E-value=0.35 Score=37.88 Aligned_cols=55 Identities=20% Similarity=0.300 Sum_probs=43.7
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEEEEEec------------------------------------------cEEE
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIVKMIKG------------------------------------------DFHV 74 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKG------------------------------------------df~v 74 (191)
...|.+|..|-.|.. |. =+.|||..|+. -.|.
T Consensus 5 ~p~f~~gE~VlcfHg-----~~-~YeAKIl~i~d~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~Y~ 78 (130)
T 3e9g_A 5 EQEFALGGRCLAFHG-----PL-MYEAKILKIWDPSSKMYTSIPNDKPGGSSQATKEIKPQKLGEDESIPEEIINGKCFF 78 (130)
T ss_dssp --CCCTTCEEEEEET-----TE-EEEEEEEEEEETTTTEEEECC--------------CCBCCCTTCCCCTTTTTSCEEE
T ss_pred cccccCCCEEEEEeC-----Cc-ceeeEEEEeeCCCcceeecccccccccccccccccccccccccccCchhhccCceEE
Confidence 357889999999884 22 37888887731 1599
Q ss_pred EEEeccCCcceeeecCCCcccCC
Q psy985 75 VEYLGCQSTFTEIVPPERMRQKN 97 (191)
Q Consensus 75 Vey~~~d~~~teIV~~erLR~~n 97 (191)
|-|.||..++.|.|+.+||+..|
T Consensus 79 VHY~GWn~~WDEWV~e~rvlk~~ 101 (130)
T 3e9g_A 79 IHYQGWKSSWDEWVGYDRIRAYN 101 (130)
T ss_dssp EEETTSCGGGCEEEETTTEECSS
T ss_pred EEeCCCCCChhhccCHhhhhccC
Confidence 99999999999999999999876
No 83
>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A
Probab=92.44 E-value=0.18 Score=32.91 Aligned_cols=27 Identities=11% Similarity=0.104 Sum_probs=21.9
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|.|..+.. ..|||.|+.
T Consensus 16 ~eLs~~~Gd~i~v~~~~~---~~~Ww~g~~ 42 (62)
T 2j6f_A 16 DELTIRVGEIIRNVKKLQ---EEGWLEGEL 42 (62)
T ss_dssp TBCCBCTTCEEEEEEECS---STTEEEEEE
T ss_pred CCcCCcCCCEEEEEEecC---CCCEEEEEE
Confidence 467899999999999832 358999985
No 84
>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A
Probab=92.41 E-value=0.14 Score=32.98 Aligned_cols=26 Identities=19% Similarity=0.381 Sum_probs=21.9
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.+ .|||.|+.
T Consensus 17 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~~ 42 (58)
T 1zx6_A 17 GDLGLKPGDKVQLLEKLS----PEWYKGSC 42 (58)
T ss_dssp TBCCBCTTCEEEEEEECS----SSEEEEEE
T ss_pred CCccCCCCCEEEEEEecC----CCEEEEEE
Confidence 467899999999998754 58999986
No 85
>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}
Probab=92.36 E-value=0.13 Score=33.06 Aligned_cols=26 Identities=15% Similarity=0.364 Sum_probs=22.0
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|.|..+.+ .|||.|+.
T Consensus 16 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~~ 41 (58)
T 2bz8_A 16 DELTISVGEIITNIRKED----GGWWEGQI 41 (58)
T ss_dssp TBCCBCTTCEEEEEECCT----TTEEEEEE
T ss_pred CEeeECCCCEEEEEEeCC----CCEEEEEE
Confidence 467899999999999753 58999986
No 86
>1w1f_A Tyrosine-protein kinase LYN; SH3-domain, SH3 domain, tyrosine kinase, signal transduction; NMR {Homo sapiens} PDB: 1wa7_A
Probab=92.28 E-value=0.23 Score=32.43 Aligned_cols=25 Identities=20% Similarity=0.549 Sum_probs=21.8
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+. .|||.|+.
T Consensus 22 ~eLs~~~Gd~i~v~~~~-----~~Ww~g~~ 46 (65)
T 1w1f_A 22 DDLSFKKGEKMKVLEEH-----GEWWKAKS 46 (65)
T ss_dssp SCCCBCTTCEEEEEEEC-----SSEEEEEE
T ss_pred CcCCCCCCCEEEEEEcC-----CCEEEEEE
Confidence 46789999999999976 68999986
No 87
>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=92.21 E-value=0.21 Score=31.94 Aligned_cols=27 Identities=15% Similarity=0.326 Sum_probs=22.2
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.++ .|||.|+.
T Consensus 16 ~eLs~~~Gd~i~v~~~~~~---~~W~~g~~ 42 (58)
T 1zuu_A 16 DEITITPGDKISLVARDTG---SGWTKINN 42 (58)
T ss_dssp TBCCBCTTCCEEEEECCSS---SSEEEEEE
T ss_pred CcccCCCCCEEEEeEcCCC---CCCEEEEE
Confidence 4678999999999987652 58999986
No 88
>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}
Probab=92.18 E-value=0.17 Score=31.99 Aligned_cols=27 Identities=11% Similarity=0.094 Sum_probs=22.6
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|.|..+.+ ..|||.|+.
T Consensus 15 ~eLs~~~Gd~i~v~~~~~---~~~W~~g~~ 41 (54)
T 2a28_A 15 DEISIDPGDIITVIRGDD---GSGWTYGEC 41 (54)
T ss_dssp TBCCBCTTCEEEEEECCC---SSSEEEEEE
T ss_pred CCccCCCCCEEEEEEecC---CCCEEEEEE
Confidence 467899999999999764 268999987
No 89
>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1
Probab=92.08 E-value=0.19 Score=33.42 Aligned_cols=25 Identities=16% Similarity=0.395 Sum_probs=21.2
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVI 64 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~ 64 (191)
....|..||.|+|..+.+ .|||.|+
T Consensus 18 ~eLsf~~Gd~i~v~~~~~----~~Ww~g~ 42 (65)
T 1b07_A 18 EDLPFKKGDILRIRDKPE----EQWWNAE 42 (65)
T ss_dssp TBCCBCTTCEEEEEECSS----SSEEEEE
T ss_pred CccCCcCCCEEEEEEecC----CCeEEEE
Confidence 467899999999999754 5899997
No 90
>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A
Probab=92.08 E-value=0.22 Score=32.79 Aligned_cols=26 Identities=19% Similarity=0.336 Sum_probs=21.4
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|.|..+.++ |||.|+.
T Consensus 21 ~eLs~~~Gd~i~v~~~~~~----gW~~g~~ 46 (65)
T 2j05_A 21 DEISFLKGDMFIVHNELED----GWMWVTN 46 (65)
T ss_dssp SBCCBCTTCEEEEEEECTT----SEEEEEE
T ss_pred CcCcCCCCCEEEEeEecCC----CEEEEEE
Confidence 4678999999999987543 8999973
No 91
>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=92.06 E-value=0.12 Score=35.42 Aligned_cols=29 Identities=14% Similarity=0.315 Sum_probs=24.1
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVI 64 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~ 64 (191)
....|..||.|+|..+.++..-.|||.|+
T Consensus 28 ~eLs~~~Gd~i~vl~~~~~~~~~~Ww~g~ 56 (79)
T 1uhc_A 28 NELSVSANQKLKILEFKDVTGNTEWWLAE 56 (79)
T ss_dssp SBCCBCTTCEEEEEESCCTTSCTTEEEEE
T ss_pred CccCCCCCCEEEEEECCCCCCCCCeEEEE
Confidence 46789999999999987754457999996
No 92
>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=91.98 E-value=0.13 Score=34.26 Aligned_cols=27 Identities=26% Similarity=0.417 Sum_probs=22.2
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
....|..||.|+|..+.++ |||.|+..
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~----~Ww~g~~~ 48 (69)
T 2eqi_A 22 DELTFCRGALIHNVSKEPG----GWWKGDYG 48 (69)
T ss_dssp SCCCBCTTCEEESCCCCSS----SCEEEEET
T ss_pred CccCCCCCCEEEEEEcCCC----CeEEEEEC
Confidence 4678999999999987543 99999865
No 93
>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A
Probab=91.95 E-value=0.18 Score=32.51 Aligned_cols=26 Identities=19% Similarity=0.424 Sum_probs=21.8
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.+ .|||.|+.
T Consensus 19 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~~ 44 (59)
T 2g6f_X 19 DELSFSKGDVIHVTRVEE----GGWWEGTH 44 (59)
T ss_dssp TBCCBCTTCEEEEEEECT----TSEEEEEE
T ss_pred CCcCCCCCCEEEEEEecC----CCEEEEEE
Confidence 467899999999998754 58999985
No 94
>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A
Probab=91.95 E-value=0.17 Score=32.25 Aligned_cols=28 Identities=7% Similarity=0.105 Sum_probs=23.1
Q ss_pred CCCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 35 TINSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 35 ~~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
+....|..||.|+|..+.+ .|||.|+..
T Consensus 15 ~~eLs~~~Gd~i~v~~~~~----~gW~~g~~~ 42 (58)
T 1zuy_A 15 PSELPLKKGDVIYITREEP----SGWSLGKLL 42 (58)
T ss_dssp TTBCCBCTTCEEEEEEECT----TSEEEEEES
T ss_pred CCcCCCCCCCEEEEEEecC----CCeEEEEEC
Confidence 3468899999999999863 589999875
No 95
>3feo_A MBT domain-containing protein 1; MBTL1, structural genomics, structural genomics consortium, metal-binding, nucleus, zinc-finger; 2.50A {Homo sapiens}
Probab=91.94 E-value=0.33 Score=44.43 Aligned_cols=54 Identities=19% Similarity=0.224 Sum_probs=41.0
Q ss_pred CcccccCCCCCCCCCccCCCeEEEEeecCCCCccceeeEEEEEEeccEEEEEEeccC
Q psy985 25 FSMVRLPPRETINSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGCQ 81 (191)
Q Consensus 25 f~~VRlPP~~~~~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGdf~vVey~~~d 81 (191)
|.+|.+++ ..-.|.+|+.|||-.+.++..+-..|.|.|.++-|-.....|.|.+
T Consensus 31 F~h~~~~~---~~~~~~~GmklEv~~~~~~~~~~~yWvA~V~~~~G~rllLry~G~~ 84 (437)
T 3feo_A 31 FKHAPMGT---CWGDISENVRVEVPNTDCSLPTKVFWIAGIVKLAGYNALLRYEGFE 84 (437)
T ss_dssp CTTSTTTT---SCTTCCTTCEEEEECSCC----CCEEEEEEEEEETTEEEEEETTCT
T ss_pred hcCCCccc---cccccCCCCEEEEecCCCCCCcCceEEEEEeeecceEEEEEecccC
Confidence 44555554 3357899999999987665444689999999999999999999984
No 96
>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=91.89 E-value=0.25 Score=35.37 Aligned_cols=50 Identities=16% Similarity=0.274 Sum_probs=32.0
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEEEEeccEEEEEEecc-CCcceeeecCCCcccC
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGC-QSTFTEIVPPERMRQK 96 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGdf~vVey~~~-d~~~teIV~~erLR~~ 96 (191)
....|..||.|+|+.... .-|||.|++. .|. .|+ -++|-+.+.....|..
T Consensus 38 ~eLsf~~Gd~i~v~~~~~---~~gWw~g~~~--~g~------~G~~Psnyv~~~~~~~~~~~ 88 (96)
T 1wie_A 38 AELPLTAGKYLYVYGDMD---EDGFYEGELL--DGQ------RGLVPSNFVDFVQDNESRLA 88 (96)
T ss_dssp TBCCCCTTCEEEEESSCC---SSSCCEEEET--TCC------BCBCCTTSEECCCSCCCCSC
T ss_pred CeeeECCCCEEEEeEecC---CCCEEEEEEC--CCC------EEEEchHHEEEcCCCCcccc
Confidence 467899999999994322 2589999852 232 233 4567776665544443
No 97
>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A
Probab=91.81 E-value=0.2 Score=32.30 Aligned_cols=28 Identities=18% Similarity=0.442 Sum_probs=22.8
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.+ ...|||.|+.
T Consensus 18 ~eLs~~~Gd~i~v~~~~~--~~~~Ww~g~~ 45 (60)
T 1oot_A 18 GDLPFRKGDVITILKKSD--SQNDWWTGRV 45 (60)
T ss_dssp TBCCBCTTCEEEEEECCS--CTTSEEEEEE
T ss_pred CEeeEcCCCEEEEEEeCC--CCCCeEEEEE
Confidence 467899999999999763 2458999986
No 98
>2gfu_A DNA mismatch repair protein MSH6; PWWP domain, tudor domain, DNA binding, DNA binding protein; HET: DNA; NMR {Homo sapiens}
Probab=91.80 E-value=0.19 Score=38.50 Aligned_cols=58 Identities=19% Similarity=0.221 Sum_probs=43.9
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEEEE---------ec--cEEEEEEeccCCcceeeecCCCcccCCCC
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVKMI---------KG--DFHVVEYLGCQSTFTEIVPPERMRQKNTN 99 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~~i---------KG--df~vVey~~~d~~~teIV~~erLR~~n~n 99 (191)
....+..||-|-+-.+ -..||||+|... +| ..|.|.|.|...+| -.|...+|.|-..+
T Consensus 19 ~~~~~~~GdlVwaK~~-----g~P~WPa~V~~~~~~~~~~~~~~~~~~~~V~FFg~~~~~-aWv~~~~l~pf~~~ 87 (134)
T 2gfu_A 19 TSSDFSPGDLVWAKME-----GYPWWPSLVYNHPFDGTFIREKGKSVRVHVQFFDDSPTR-GWVSKRLLKPYTGS 87 (134)
T ss_dssp SSCCCCTTSEEEECCT-----TSCCEEEECCCCSSTTCCEEESSSCEEEEEEECSSSCEE-EEECGGGEEESCCT
T ss_pred cCCCCCCCCEEEEeec-----CCCCCCeeecchhhhhhhhhccCCCceEEEEECCCCCce-EEECHHHcccCcch
Confidence 3478999999988765 347999999764 34 47999998764344 57888899887755
No 99
>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A
Probab=91.79 E-value=0.13 Score=34.06 Aligned_cols=26 Identities=8% Similarity=0.189 Sum_probs=21.3
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.+ .|||.|+.
T Consensus 22 ~eLs~~~Gd~i~v~~~~~----~~W~~g~~ 47 (68)
T 2dl3_A 22 KELPLQKGDIVYIYKQID----QNWYEGEH 47 (68)
T ss_dssp TBCCBCTTCEEEEEECCS----TTEEEEEC
T ss_pred CCccCCCCCEEEEeEecC----CCEEEEEE
Confidence 467899999999998644 38999983
No 100
>2daq_A WHSC1L1 protein, isoform long; PWWP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.2
Probab=91.78 E-value=0.2 Score=37.05 Aligned_cols=57 Identities=16% Similarity=0.097 Sum_probs=43.1
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEEEEE------------eccEEEEEEeccCCcceeeecCCCcccCCCCC
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIVKMI------------KGDFHVVEYLGCQSTFTEIVPPERMRQKNTNP 100 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V~~i------------KGdf~vVey~~~d~~~teIV~~erLR~~n~n~ 100 (191)
-+.+..||-|-+-.+. +.||||+|... +..-|.|.|.|. .+| -.|...+|.|-..+.
T Consensus 6 g~~~~~GdlVwaK~~g-----~p~WPa~V~~~~~~p~~~~~~~~~~~~~~V~FFg~-~~~-awv~~~~l~p~~~~~ 74 (110)
T 2daq_A 6 SGKLHYKQIVWVKLGN-----YRWWPAEICNPRSVPLNIQGLKHDLGDFPVFFFGS-HDY-YWVHQGRVFPYVEGD 74 (110)
T ss_dssp CCSCCSSEEEEEECSS-----SCEEEEEECCTTTSCHHHHTSCCCSSCEEEEETTT-TEE-EEECSSSSEECCSSC
T ss_pred CCCCCCCCEEEEEeCC-----CCCCceeeCChhhCCHHHhhccCCCCcEEEEEecC-CCE-EEEcHHHCcCcchhh
Confidence 4678899999998764 57999999765 223588999884 333 678999999877553
No 101
>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}
Probab=91.78 E-value=0.18 Score=34.34 Aligned_cols=27 Identities=19% Similarity=0.187 Sum_probs=21.9
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
....|..||.|.|..+.++ |||.|+..
T Consensus 20 ~eLs~~~Gd~i~v~~~~~~----gWw~g~~~ 46 (73)
T 2lcs_A 20 NELRLAEGDIVFISYKHGQ----GWLVAENE 46 (73)
T ss_dssp TBCCBCTTCEEEEEEEETT----TEEEEECT
T ss_pred CccCCcCCCEEEEEEEcCC----CEEEEEEC
Confidence 4678999999999987544 89999753
No 102
>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A
Probab=91.76 E-value=0.18 Score=34.31 Aligned_cols=27 Identities=19% Similarity=0.357 Sum_probs=22.1
Q ss_pred CCCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 35 TINSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 35 ~~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
+....|..||.|+|+.+. ..|||.|++
T Consensus 25 ~~eLs~~~Gd~i~v~~~~----~~gWw~g~~ 51 (73)
T 2ebp_A 25 TDSLKLKKGDIIDIISKP----PMGTWMGLL 51 (73)
T ss_dssp CSBCCBCSSCEEEEEECC----SSSCEEEEC
T ss_pred CCccCCCCCCEEEEEEeC----CCCeEEEEE
Confidence 356889999999999984 358999965
No 103
>2hqx_A P100 CO-activator tudor domain; human P100 tudor domain, proteolytic fragment, PSI, structural genomics; 1.42A {Homo sapiens} SCOP: b.34.9.1 PDB: 2hqe_A 3omc_A* 3omg_A* 2o4x_A 2e6n_A 2o4x_B
Probab=91.76 E-value=0.44 Score=39.10 Aligned_cols=74 Identities=18% Similarity=0.196 Sum_probs=46.6
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEEEEEe-ccEEEEEEeccCCcceeeecCCCcccCCCCC-----CCCcCceeEE
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIVKMIK-GDFHVVEYLGCQSTFTEIVPPERMRQKNTNP-----PIDAKTFHKF 110 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V~~iK-Gdf~vVey~~~d~~~teIV~~erLR~~n~n~-----pi~~~~f~k~ 110 (191)
...+..|+.+-+... + -.|++|+|..+. ++-+.|.|... -.++.|+..+||+..+.- |.-...+.-.
T Consensus 63 ~~~~~~G~~c~a~~~-d----~~wyRa~V~~~~~~~~~~V~~vDy--Gn~~~v~~~~lr~l~~~~~~~~lp~~a~~~~L~ 135 (246)
T 2hqx_A 63 SYAPRRGEFCIAKFV-D----GEWYRARVEKVESPAKIHVFYIDY--GNREVLPSTRLGTLSPAFSTRVLPAQATEYAFA 135 (246)
T ss_dssp TCCCCTTCEEEEECT-T----SCEEEEEEEEEEETTEEEEEETTT--CCEEEECGGGEECCCGGGSTTTSCCCC------
T ss_pred CCCCCCCCEEEEEcC-C----CCEEEEEEEEEcCCCeEEEEEEeC--CCeEEEeHHHhhcCCHhHcCCCCchhhhhhhhh
Confidence 467889999999654 3 269999999987 57888999844 568999999999986431 3333333334
Q ss_pred eecCChh
Q psy985 111 DIEVPLD 117 (191)
Q Consensus 111 ~i~VPed 117 (191)
-|..|++
T Consensus 136 ~v~~p~~ 142 (246)
T 2hqx_A 136 FIQVPQD 142 (246)
T ss_dssp -------
T ss_pred ceecCCC
Confidence 4555654
No 104
>4glm_A Dynamin-binding protein; SH3 domain, DNMBP, structural genomics, structural genomics consortium, SGC, SRC homology 3 domains, cell junctions; 1.90A {Homo sapiens}
Probab=91.69 E-value=0.19 Score=33.35 Aligned_cols=26 Identities=12% Similarity=0.323 Sum_probs=21.8
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|.|..+.+ .|||.|+.
T Consensus 28 ~eLs~~~Gd~i~v~~~~~----~~W~~g~~ 53 (72)
T 4glm_A 28 NELDFEVGDKIRILATLE----DGWLEGSL 53 (72)
T ss_dssp TBCCBCTTCEEEEEEECS----TTEEEEEE
T ss_pred CcCCCCCCCEEEEEEccC----CCEEEEEE
Confidence 467899999999998764 57999994
No 105
>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A
Probab=91.67 E-value=0.15 Score=33.16 Aligned_cols=26 Identities=12% Similarity=0.366 Sum_probs=21.7
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|.|..+.+ .|||.|+.
T Consensus 22 ~eLs~~~Gd~i~v~~~~~----~~W~~g~~ 47 (65)
T 3u23_A 22 DELELKVGDIIDINEEVE----EGWWSGTL 47 (65)
T ss_dssp TBCCBCTTCEEEEEEEEE----TTEEEEEE
T ss_pred CCcCCCCCCEEEEEEecC----CCEEEEEE
Confidence 467899999999998753 58999994
No 106
>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.63 E-value=0.16 Score=34.64 Aligned_cols=26 Identities=15% Similarity=0.464 Sum_probs=22.0
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|+.+.+ .|||.|+.
T Consensus 25 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~~ 50 (76)
T 2epd_A 25 QELSFRRGDVLRLHERAS----SDWWRGEH 50 (76)
T ss_dssp TBCEECTTCEEEEEEEEE----TTEEEEEE
T ss_pred CccCCCCCCEEEEEEeCC----CCEEEEEE
Confidence 467889999999999864 58999986
No 107
>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.61 E-value=0.33 Score=32.59 Aligned_cols=29 Identities=17% Similarity=0.387 Sum_probs=22.5
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.+ ....|||.|+.
T Consensus 23 ~eLsf~~Gd~i~v~~~~~-~~~~~Ww~g~~ 51 (73)
T 2dl7_A 23 DELSFPEGAIIRILNKEN-QDDDGFWEGEF 51 (73)
T ss_dssp TBCCBCTTCEEEEEECCC-SSSSSCEEEEE
T ss_pred CcCCCCCCCEEEEEECCC-CCCCCcEEEEE
Confidence 468899999999999742 12458999983
No 108
>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A
Probab=91.60 E-value=0.21 Score=31.74 Aligned_cols=26 Identities=23% Similarity=0.532 Sum_probs=21.3
Q ss_pred CCCCCccCCCeEEEEeecCCCCccceeeEE
Q psy985 35 TINSGFVENQEVEVFSKATEGESCGWWKVI 64 (191)
Q Consensus 35 ~~~~~~~egdeVEV~sran~~ep~gWW~a~ 64 (191)
+....|..||.|.|..+.+ .|||.|.
T Consensus 15 ~~eLs~~~Gd~i~v~~~~~----~~W~~g~ 40 (58)
T 4e6r_A 15 EDELSLVXGSRVTVMEXCS----DGWWRGS 40 (58)
T ss_dssp TTBCCBCTTCEEEEEEECT----TSEEEEE
T ss_pred CCEeeEeCCCEEEEeEcCC----CCEEEEE
Confidence 3468899999999998763 5899994
No 109
>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*
Probab=91.56 E-value=0.26 Score=32.03 Aligned_cols=25 Identities=12% Similarity=0.094 Sum_probs=20.7
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVI 64 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~ 64 (191)
....|..||.|+|..+.+ .|||.|+
T Consensus 18 ~eLs~~~Gd~i~v~~~~~----~~W~~g~ 42 (62)
T 2fpe_A 18 DELELEVDDPLLVELQAE----DYWYEAY 42 (62)
T ss_dssp TBCCBCTTCEEEEEEECT----TSEEEEE
T ss_pred CcCcCCCCCEEEEEEecC----CCEEEEE
Confidence 467899999999986644 6899997
No 110
>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}
Probab=91.50 E-value=0.19 Score=33.57 Aligned_cols=26 Identities=8% Similarity=0.070 Sum_probs=21.5
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|.|..+.+ .|||.|+.
T Consensus 16 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~~ 41 (65)
T 2nwm_A 16 KELTLQKGDIVYIHKEVD----KNWLEGEH 41 (65)
T ss_dssp TBCCBCTTCEEEEEECCT----TTCEEEEE
T ss_pred CccCCcCCCEEEEEEecC----CCEEEEEE
Confidence 467899999999998743 58999984
No 111
>2kbt_A Chimera of proto-oncogene VAV, linker, immunoglobulin G-binding protein G; sortase, protein ligation, intein, inset, solubility enhancement; NMR {Mus musculus}
Probab=91.45 E-value=0.27 Score=38.02 Aligned_cols=45 Identities=22% Similarity=0.445 Sum_probs=30.8
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEEEEeccEEEEEEecc-CCcceeeecCCC
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGC-QSTFTEIVPPER 92 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGdf~vVey~~~-d~~~teIV~~er 92 (191)
....|..||.|+|..+.+ ..|||.|+. .|.- |+ .++|-+++..+-
T Consensus 20 ~ELsf~~Gd~i~Vl~~~~---~~gWw~g~~---~g~~------G~fP~~yv~~~~~~~ 65 (142)
T 2kbt_A 20 SELSLKEGDIIKILNKKG---QQGWWRGEI---YGRI------GWFPSNYVEEDYSEY 65 (142)
T ss_dssp SBCCCCTTCEEEEEECCC---SSSEEEEEE---TTEE------EEEETTSEEESSCCC
T ss_pred CcCCCCCCCEEEEEEecC---CCCeEEEEE---CCee------EEechHHEEEccccc
Confidence 467899999999998752 358999986 3431 22 455666665544
No 112
>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A
Probab=91.43 E-value=0.21 Score=31.88 Aligned_cols=26 Identities=15% Similarity=0.424 Sum_probs=22.1
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.+ .|||.|+.
T Consensus 17 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~~ 42 (58)
T 1sem_A 17 GELAFKRGDVITLINKDD----PNWWEGQL 42 (58)
T ss_dssp TBCCBCTTCEEEEEECSS----SSEEEEEE
T ss_pred CCcCCCCCCEEEEEEecC----CCEEEEEE
Confidence 467899999999999743 58999987
No 113
>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D
Probab=91.40 E-value=0.11 Score=33.42 Aligned_cols=28 Identities=18% Similarity=0.353 Sum_probs=22.2
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
....|..||.|+|..+.++ .|||.|+..
T Consensus 18 ~eLs~~~Gd~i~v~~~~~~---~~W~~g~~~ 45 (60)
T 2x3w_D 18 DELSFKAGDELTKLGEEDE---QGWCRGRLD 45 (60)
T ss_dssp SBCCBCTTCEEEECSCCCS---SSEEEEECS
T ss_pred CcccCCCCCEEEEEEccCC---CCceEEEeC
Confidence 4678999999999986533 489999854
No 114
>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A
Probab=91.39 E-value=0.21 Score=34.52 Aligned_cols=26 Identities=12% Similarity=0.507 Sum_probs=21.8
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|.|..+.+ .|||.|+.
T Consensus 20 ~eLs~~~Gd~i~vl~~~~----~~Ww~g~~ 45 (79)
T 3cqt_A 20 DDLSFHKGEKFQILNSSE----GDWWEARS 45 (79)
T ss_dssp TBCCBCTTCEEEEEECTT----SSEEEEEE
T ss_pred CcCCCCCCCEEEEEEecC----CCeEEEEE
Confidence 467899999999998654 58999987
No 115
>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.39 E-value=0.15 Score=33.95 Aligned_cols=26 Identities=12% Similarity=0.383 Sum_probs=21.5
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.+ .|||.|+.
T Consensus 22 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~~ 47 (68)
T 2dl4_A 22 EDLEMRPGDIITLLEDSN----EDWWKGKI 47 (68)
T ss_dssp TBCCCCTTCEEEEEECCC----SSEEEEEC
T ss_pred CCcCCCCCCEEEEEEeCC----CCEEEEEE
Confidence 467899999999998644 48999984
No 116
>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.37 E-value=0.31 Score=32.40 Aligned_cols=28 Identities=18% Similarity=0.367 Sum_probs=22.4
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
....|..||.|+|..+.+ .-|||.|+..
T Consensus 22 ~eLs~~~Gd~i~vl~~~~---~~gW~~~~~~ 49 (70)
T 2ct4_A 22 GTISMAEGEDLSLMEEDK---GDGWTRVRRK 49 (70)
T ss_dssp TCCCBCTTCEEEEEECCS---SSCEEEEECS
T ss_pred CcCCCCCCCEEEEEeccC---CCCeEEEEeC
Confidence 467899999999998654 3489999854
No 117
>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.37 E-value=0.2 Score=34.27 Aligned_cols=26 Identities=15% Similarity=0.510 Sum_probs=21.5
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|.|..+.++ |||.|+.
T Consensus 32 ~eLs~~~Gd~i~v~~~~~~----~Ww~g~~ 57 (79)
T 1x69_A 32 DEISFDPDDIITNIEMIDD----GWWRGVC 57 (79)
T ss_dssp SBCCCCTTCEEEEEEECSS----SEEEEEE
T ss_pred CCcCcCCCCEEEEeEecCC----CeEEEEE
Confidence 4678999999999987643 8999984
No 118
>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens}
Probab=91.30 E-value=0.16 Score=35.64 Aligned_cols=27 Identities=15% Similarity=0.342 Sum_probs=22.1
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
....|..||.|+|..+.++ |||.|++.
T Consensus 34 ~eLsf~~GDiI~V~~~~~~----gWw~G~~~ 60 (83)
T 2ke9_A 34 TALNVRAGDVITVLEQHPD----GRWKGHIH 60 (83)
T ss_dssp TBCCBCTTCEEEESCSSCS----SCEEEEEC
T ss_pred CcccccCCCEEEEEEecCC----CeEEEEEC
Confidence 4678999999999887553 79999865
No 119
>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A
Probab=91.25 E-value=0.34 Score=31.26 Aligned_cols=26 Identities=15% Similarity=0.190 Sum_probs=21.9
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|.|..+.+ .|||.|+.
T Consensus 21 ~eLs~~~Gd~i~v~~~~~----~~W~~g~~ 46 (64)
T 4f14_A 21 DEVSFRDGDYIVNVQPID----DGWMYGTV 46 (64)
T ss_dssp TBCCBCTTCEEEEEEECS----SSEEEEEE
T ss_pred CcCCCCCCCEEEEEEeCC----CCeEEEEE
Confidence 468899999999998764 48999987
No 120
>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A
Probab=91.24 E-value=0.28 Score=31.90 Aligned_cols=25 Identities=20% Similarity=0.646 Sum_probs=20.5
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+. .|||.|+-
T Consensus 21 ~eLs~~~Gd~i~v~~~~-----~~Ww~g~~ 45 (62)
T 2iim_A 21 GDLGFEKGEQLRILEQS-----GEWWKAQS 45 (62)
T ss_dssp TBCCBCTTCEEEEEECC-----SSEEEEEE
T ss_pred CCcCCCCCCEEEEEEcC-----CCEEEEEE
Confidence 46789999999999972 28999974
No 121
>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}
Probab=91.20 E-value=0.24 Score=32.00 Aligned_cols=26 Identities=19% Similarity=0.571 Sum_probs=22.1
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.+ .|||.|+.
T Consensus 20 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~~ 45 (60)
T 2xmf_A 20 DELSFNANDIIDIIKEDP----SGWWTGRL 45 (60)
T ss_dssp TBCCBCTTCEEEEEEECT----TSEEEEEE
T ss_pred CCcCCCCCCEEEEEEecC----CCEEEEEE
Confidence 467899999999999764 58999987
No 122
>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.15 E-value=0.31 Score=33.70 Aligned_cols=27 Identities=15% Similarity=0.345 Sum_probs=22.2
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.++ .|||.|+.
T Consensus 32 ~eLsf~~Gd~i~v~~~~~~---~~Ww~g~~ 58 (81)
T 1x6g_A 32 GELAFRKGDVVTILEACEN---KSWYRVKH 58 (81)
T ss_dssp TCCCBCTTCEEEEEECCCS---SSEEEEEE
T ss_pred CCCCCCCCCEEEEEeccCC---CCeEEEEe
Confidence 4678999999999997554 58999973
No 123
>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=91.12 E-value=0.45 Score=33.62 Aligned_cols=47 Identities=21% Similarity=0.389 Sum_probs=31.2
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEEEEeccEEEEEEecc-CCcceeeecCCCc
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGC-QSTFTEIVPPERM 93 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGdf~vVey~~~-d~~~teIV~~erL 93 (191)
....|..||.|+|..+.++ -.|||.|+.. |.. |+ -++|-+++.....
T Consensus 20 ~eLsf~~Gd~i~v~~~~~~--~~gWw~g~~~---g~~------G~~P~~yv~~~~~~~~ 67 (93)
T 1uff_A 20 DEMSFNSGDIIQVDEKTVG--EPGWLYGSFQ---GNF------GWFPCNYVEKMPSSEN 67 (93)
T ss_dssp SCCCBCTTCEEEECSSCCC--SSSEEEEEET---TEE------EEEETTTEEECCSSSS
T ss_pred CCcCCCCCCEEEEeEccCC--CCCEEEEEEC---CCE------EEechHHeEEcCCccc
Confidence 4688999999999886421 3589999943 431 22 4456666665533
No 124
>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...
Probab=91.12 E-value=0.24 Score=31.90 Aligned_cols=27 Identities=15% Similarity=0.420 Sum_probs=22.1
Q ss_pred CCCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 35 TINSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 35 ~~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
+....|..||.|.|..+.+ .|||.|+.
T Consensus 20 ~~eLs~~~Gd~i~v~~~~~----~~Ww~~~~ 46 (62)
T 3ngp_A 20 PRELTVKKGDILTLLNSTN----KDWWKIEV 46 (62)
T ss_dssp TTBCCBCTTCEEEEEECCS----SSEEEEEE
T ss_pred CCCccCCCCCEEEEeEecC----CCeEEEEE
Confidence 3467899999999999764 57999984
No 125
>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}
Probab=91.07 E-value=0.24 Score=31.78 Aligned_cols=26 Identities=19% Similarity=0.346 Sum_probs=21.7
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+. ..|||.|+.
T Consensus 18 ~eLs~~~Gd~i~v~~~~----~~~Ww~g~~ 43 (58)
T 1zlm_A 18 DELYFEEGDIIYITDMS----DTNWWKGTS 43 (58)
T ss_dssp TBCCBCTTCEEEEEECC----SSSEEEEEE
T ss_pred CCccCCCCCEEEEEEeC----CCCEEEEEE
Confidence 46789999999999873 358999985
No 126
>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1
Probab=91.03 E-value=0.29 Score=32.36 Aligned_cols=25 Identities=20% Similarity=0.460 Sum_probs=21.3
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVI 64 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~ 64 (191)
....|..||.|.|..+.+ .|||.|+
T Consensus 17 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~ 41 (67)
T 1gl5_A 17 HDLRLERGQEYIILEKND----LHWWRAR 41 (67)
T ss_dssp SBCCBCTTCEEEEEECSS----SSEEEEE
T ss_pred CeecCCcCCEEEEEEccC----CCcEEEE
Confidence 467899999999999844 5899997
No 127
>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}
Probab=90.95 E-value=0.25 Score=32.71 Aligned_cols=26 Identities=8% Similarity=0.171 Sum_probs=21.5
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.+ .|||.|+.
T Consensus 22 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~~ 47 (68)
T 2djq_A 22 GDLKFNKGDVILLRRQLD----ENWYQGEI 47 (68)
T ss_dssp TCCCCCTTCEEEEEECCC----SSEEEEEE
T ss_pred CCccCCCCCEEEEEEecC----CCEEEEEE
Confidence 468899999999988643 58999984
No 128
>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}
Probab=90.91 E-value=0.19 Score=33.19 Aligned_cols=26 Identities=23% Similarity=0.408 Sum_probs=21.2
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.+ .|||.|+.
T Consensus 25 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~~ 50 (68)
T 1s1n_A 25 GDLTFKKGEILLVIEKKP----DGWWIAKD 50 (68)
T ss_dssp SCCCBCSSEEEEECSCCS----SSEEEEEC
T ss_pred CcCCCCCCCEEEEEEcCC----CCeEEEEE
Confidence 467899999999998743 38999983
No 129
>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.90 E-value=0.25 Score=33.85 Aligned_cols=26 Identities=23% Similarity=0.438 Sum_probs=21.8
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|+.+.+ .|||.|+.
T Consensus 32 ~eLsf~~Gd~i~v~~~~~----~gWw~g~~ 57 (78)
T 2ed0_A 32 DELSFQEGAIIYVIKKND----DGWYEGVM 57 (78)
T ss_dssp TBCCBCSSCEEEEEEECS----SSEEEEEE
T ss_pred CcccccCCCEEEEEEeCC----CCEEEEEE
Confidence 467899999999999754 48999984
No 130
>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens}
Probab=90.86 E-value=0.087 Score=35.30 Aligned_cols=26 Identities=12% Similarity=0.369 Sum_probs=21.1
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+. ..|||.|+.
T Consensus 16 ~eLs~~~Gd~i~v~~~~----~~gWw~g~~ 41 (65)
T 2fei_A 16 DELELKVGDIIDINEEV----EEGWWSGTL 41 (65)
T ss_dssp TBCCCCTTCEEECCCCS----SSSEEEEES
T ss_pred CccCCCCCCEEEEEEec----CCCEEEEEE
Confidence 46789999999998764 358999974
No 131
>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A
Probab=90.85 E-value=0.24 Score=31.65 Aligned_cols=26 Identities=23% Similarity=0.506 Sum_probs=21.9
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.+ .|||.|+.
T Consensus 17 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~~ 42 (58)
T 2vwf_A 17 GELGFRRGDFIHVMDNSD----PNWWKGAC 42 (58)
T ss_dssp TBCCBCTTCEEEEEECCS----SSEEEEEE
T ss_pred CCcCCCCCCEEEEEEcCC----CCEEEEEE
Confidence 467899999999998743 58999987
No 132
>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.84 E-value=0.2 Score=34.16 Aligned_cols=27 Identities=11% Similarity=0.110 Sum_probs=21.8
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|+.+.. ..|||.|++
T Consensus 29 ~eLsf~~Gd~i~v~~~~~---~~gWw~g~~ 55 (75)
T 2ege_A 29 GRLALRAGDVVMVYGPMD---DQGFYYGEL 55 (75)
T ss_dssp CBCCBCTTCEEEEESCCC---TTCEEEEES
T ss_pred CcceECCCCEEEEeEccC---CCCEEEEEE
Confidence 467899999999997533 458999986
No 133
>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A
Probab=90.80 E-value=0.27 Score=32.04 Aligned_cols=28 Identities=32% Similarity=0.596 Sum_probs=22.4
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.+ ...|||.|+.
T Consensus 21 ~eLs~~~Gd~i~v~~~~~--~~~~W~~g~~ 48 (64)
T 2jte_A 21 DELTFREGEIIHLISKET--GEAGWWKGEL 48 (64)
T ss_dssp SBCCBCTTCEEEEEESCS--SSTTEEEEEE
T ss_pred CccCCCCCCEEEEEECCC--CCCCEEEEEE
Confidence 467899999999998753 2358999985
No 134
>1v1c_A Obscurin; muscle, sarcomere, adapter, myogenesis, SH3-domain; NMR {Homo sapiens}
Probab=90.73 E-value=0.2 Score=35.51 Aligned_cols=28 Identities=32% Similarity=0.228 Sum_probs=23.9
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVKM 67 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~~ 67 (191)
....+.+||.|||..+.++ |||..+.+-
T Consensus 22 ~ei~lk~Gd~VeVl~k~~~----gwW~vr~~~ 49 (71)
T 1v1c_A 22 DAITLREGQYVEVLDAAHP----LRWLVRTKP 49 (71)
T ss_dssp TBCCBCTTCEEEEEEEEET----TEEEEEECC
T ss_pred ceeeecCCCEEEEEEcCCC----CEEEEEecC
Confidence 3667899999999998876 799998874
No 135
>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A
Probab=90.73 E-value=0.26 Score=31.46 Aligned_cols=26 Identities=27% Similarity=0.561 Sum_probs=21.7
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+. ..|||.|+.
T Consensus 18 ~eLs~~~Gd~i~v~~~~----~~~W~~g~~ 43 (58)
T 2drm_A 18 DELTFKEGDTIIVHQKD----PAGWWEGEL 43 (58)
T ss_dssp TBCCBCTTCEEEEEECC----TTSEEEEEE
T ss_pred CCcCCCCCCEEEEEEec----CCCEEEEEE
Confidence 46789999999999874 358999986
No 136
>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=90.72 E-value=0.26 Score=33.29 Aligned_cols=25 Identities=20% Similarity=0.445 Sum_probs=21.0
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+ + -|||.|+.
T Consensus 25 ~eLs~~~Gd~i~v~~~-~----~~Ww~g~~ 49 (74)
T 1j3t_A 25 NHLNFSKHDIITVLEQ-Q----ENWWFGEV 49 (74)
T ss_dssp TBCCBCTTCEEEEEEE-C----SSEEEEES
T ss_pred CccCCCCCCEEEEEec-C----CCEEEEEE
Confidence 4678999999999998 2 38999985
No 137
>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}
Probab=90.64 E-value=0.25 Score=33.35 Aligned_cols=26 Identities=15% Similarity=0.387 Sum_probs=22.0
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.+ .|||.|+.
T Consensus 28 ~eLs~~~Gd~i~v~~~~~----~~W~~g~~ 53 (73)
T 3c0c_A 28 GELGFREGDLITLTNQID----ENWYEGML 53 (73)
T ss_dssp TBCCBCTTCEEEEEEECS----SSEEEEEE
T ss_pred CCccCcCCCEEEEEEecC----CCEEEEEE
Confidence 467899999999999764 48999986
No 138
>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*
Probab=90.63 E-value=0.36 Score=32.17 Aligned_cols=26 Identities=12% Similarity=0.507 Sum_probs=21.9
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|.|..+.+ .|||.|+.
T Consensus 30 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~~ 55 (73)
T 3h0h_A 30 DDLSFHKGEKFQILNSSE----GDWWEARS 55 (73)
T ss_dssp TBCCBCTTCEEEEEECSS----SSEEEEEE
T ss_pred CcceEeCCCEEEEEEecC----CCeEEEEE
Confidence 467899999999998764 47999987
No 139
>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus}
Probab=90.62 E-value=0.34 Score=32.34 Aligned_cols=25 Identities=12% Similarity=0.094 Sum_probs=20.8
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVI 64 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~ 64 (191)
....|..||.|+|..+.+ .|||.|+
T Consensus 21 ~eLs~~~Gd~i~v~~~~~----~gW~~g~ 45 (71)
T 2fpf_A 21 DELELEVDDPLLVELQAE----DYWYEAY 45 (71)
T ss_dssp TBCCBCTTCEEEEEEECT----TSEEEEE
T ss_pred CcccCcCCcEEEEeEecC----CCEEEEE
Confidence 467899999999986644 6899997
No 140
>4fu6_A PC4 and SFRS1-interacting protein; structural genomics consortium, SGC, transcription; 2.10A {Homo sapiens} PDB: 2b8a_A 2nlu_A
Probab=90.60 E-value=0.15 Score=39.99 Aligned_cols=54 Identities=11% Similarity=0.183 Sum_probs=38.8
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEEEE-------eccEEEEEEeccCCcceeeecCCCcccC
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVKMI-------KGDFHVVEYLGCQSTFTEIVPPERMRQK 96 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~~i-------KGdf~vVey~~~d~~~teIV~~erLR~~ 96 (191)
-..+|..||-|-+-.+. .-||||+|... ...-|.|.|.|.. +| -.|...+|.|-
T Consensus 19 ~~~~f~~GdlVwaK~~g-----~p~WPa~V~~~~~~~~~~~~~~~~V~FfG~~-~~-awv~~~~l~~f 79 (153)
T 4fu6_A 19 MTRDFKPGDLIFAKMKG-----YPHWPARVDEVPDGAVKPPTNKLPIFFFGTH-ET-AFLGPKDIFPY 79 (153)
T ss_dssp SGGGCCTTCEEEECCTT-----SCCEEEEECCCC---CCCCTTCEEEEETTTC-CE-EEECGGGEEEH
T ss_pred cccCCCCCCEEEEeCCC-----CCCCCEEEeEchhhccCCCCCEEEEEecCCC-Ce-EEeCHHHccCh
Confidence 35789999999887643 45999999543 2346899998753 33 57777777764
No 141
>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=90.60 E-value=0.14 Score=35.24 Aligned_cols=26 Identities=19% Similarity=0.424 Sum_probs=21.6
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.+ .|||.|+.
T Consensus 32 ~eLsf~~Gd~i~Vl~~~~----~gWw~g~~ 57 (72)
T 2l0a_A 32 NELTFKAGEIITVLDDSD----PNWWKGET 57 (72)
T ss_dssp TBCCBCTTCEEEEEEEEE----TTEEEEEC
T ss_pred CccCCCCCCEEEEEEecC----CCEEEEEE
Confidence 467899999999998743 58999985
No 142
>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A
Probab=90.55 E-value=0.29 Score=31.94 Aligned_cols=26 Identities=19% Similarity=0.424 Sum_probs=21.6
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.+ .|||.|+.
T Consensus 21 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~~ 46 (64)
T 2ak5_A 21 DELSFSKGDVIHVTRVEE----GGWWEGTH 46 (64)
T ss_dssp TBCCBCTTCEEEEEECCT----TSEEEEEE
T ss_pred CcccCCCCCEEEEeEecC----CCEEEEEE
Confidence 467899999999998654 58999985
No 143
>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.47 E-value=0.28 Score=34.10 Aligned_cols=29 Identities=14% Similarity=0.100 Sum_probs=22.4
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
....|..||.|+|+.+. ..-.|||.|+..
T Consensus 23 ~eLsf~~Gd~i~v~~~~--~~~~~Ww~g~~~ 51 (85)
T 2dlp_A 23 SLLSFHRGDLIKLLPVA--TLEPGWQFGSAG 51 (85)
T ss_dssp SBCCBCTTCEEEECCCS--CCCTTEEEEESS
T ss_pred CCccCcCCCEEEEEEcc--CCCCCeEEEEEC
Confidence 46789999999999872 223589999863
No 144
>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus}
Probab=90.43 E-value=0.28 Score=32.45 Aligned_cols=25 Identities=20% Similarity=0.389 Sum_probs=21.2
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVI 64 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~ 64 (191)
....|..||.|+|..+.+ .|||.|+
T Consensus 22 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~ 46 (70)
T 2cuc_A 22 EELDLQKGEGIRVLGKYQ----DGWLKGL 46 (70)
T ss_dssp TBCCBCTTCEEEEEEEEE----TTEEEEE
T ss_pred CcCCCCCCCEEEEEEecC----CCeEEEE
Confidence 467899999999998764 4899997
No 145
>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A
Probab=90.43 E-value=0.18 Score=33.95 Aligned_cols=26 Identities=15% Similarity=0.392 Sum_probs=21.7
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.+ -|||.|+.
T Consensus 22 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~~ 47 (73)
T 2dbm_A 22 GELGFKEGDIITLTNQID----ENWYEGML 47 (73)
T ss_dssp TCCCBCTTCEEECCBCSS----SSEEEEEE
T ss_pred CCccCCCCCEEEEEEecC----CCEEEEEE
Confidence 468899999999998654 38999985
No 146
>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A
Probab=90.33 E-value=0.27 Score=32.74 Aligned_cols=27 Identities=26% Similarity=0.556 Sum_probs=21.6
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVI 64 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~ 64 (191)
....|..||.|+|..+.+ ...|||.|+
T Consensus 21 ~eLs~~~Gd~i~v~~~~~--~~~~Ww~g~ 47 (71)
T 1u5s_A 21 EELNFEKGETMEVIEKPE--NDPEWWKCK 47 (71)
T ss_dssp SBCCCCSSCCEEEEECCC--TTTCEEEEE
T ss_pred CcccCCCCCEEEEEECCC--CCCCCEEEE
Confidence 467899999999999742 245899997
No 147
>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=90.30 E-value=0.37 Score=32.80 Aligned_cols=29 Identities=24% Similarity=0.597 Sum_probs=23.8
Q ss_pred CCCccCCCeEEEEeecCC-CCccceeeEEE
Q psy985 37 NSGFVENQEVEVFSKATE-GESCGWWKVIV 65 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~-~ep~gWW~a~V 65 (191)
...|..||.|.|..+.++ ....|||.|+.
T Consensus 31 eLs~~~Gd~i~v~~~~~~~~~~~~Ww~g~~ 60 (80)
T 2v1r_A 31 EVALKKGDLMAILSKKDPLGRDSDWWKVRT 60 (80)
T ss_dssp BCCBCTTCEEEEEEEECTTSCEEEEEEEEC
T ss_pred EecCCCCCEEEEEECCCCCCCCCCcEEEEe
Confidence 677999999999998765 23469999986
No 148
>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens}
Probab=90.13 E-value=0.18 Score=33.58 Aligned_cols=28 Identities=11% Similarity=0.438 Sum_probs=22.8
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVKM 67 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~~ 67 (191)
....|..||.|+|..+.++ +||.|+...
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~----~Ww~g~~~~ 49 (70)
T 2ecz_A 22 VEMSFRKGERITLLRQVDE----NWYEGRIPG 49 (70)
T ss_dssp TBCCCCTTCBCEEEEEEET----TEEEEEETT
T ss_pred CCcCCCCCCEEEEEEecCC----CeEEEEECC
Confidence 4678999999999987543 899998754
No 149
>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}
Probab=90.13 E-value=0.43 Score=31.96 Aligned_cols=28 Identities=21% Similarity=0.413 Sum_probs=22.2
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|.|..+.. ...|||.|+.
T Consensus 24 ~eLs~~~Gd~i~v~~~~~--~~~~W~~g~~ 51 (73)
T 2k9g_A 24 DELTIKEGDIVTLINKDC--IDVGWWEGEL 51 (73)
T ss_dssp TBCCBCTTCEEEEEECCS--SSTTEEEEEE
T ss_pred CeeeECCCCEEEEEECCC--CCCCEEEEEE
Confidence 467899999999998751 2358999985
No 150
>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} SCOP: b.34.2.1
Probab=90.11 E-value=0.31 Score=32.50 Aligned_cols=26 Identities=19% Similarity=0.472 Sum_probs=21.7
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|.|..+.+ .|||.|+.
T Consensus 20 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~~ 45 (73)
T 3thk_A 20 REVTMKKGDILTLLNSTN----KDWWKVEV 45 (73)
T ss_dssp TBCCBCTTCEEEEEECCS----SSEEEEEE
T ss_pred CccCCCCCCEEEEEECCC----CCeEEEEE
Confidence 467899999999998764 57999973
No 151
>3feo_A MBT domain-containing protein 1; MBTL1, structural genomics, structural genomics consortium, metal-binding, nucleus, zinc-finger; 2.50A {Homo sapiens}
Probab=89.96 E-value=0.56 Score=42.91 Aligned_cols=51 Identities=16% Similarity=0.150 Sum_probs=42.9
Q ss_pred CCccCCCeEEEEeecCCCCccceeeEEEEEEeccEEEEEEeccCCcceeeecCC
Q psy985 38 SGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGCQSTFTEIVPPE 91 (191)
Q Consensus 38 ~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGdf~vVey~~~d~~~teIV~~e 91 (191)
-.|++|+.+|+--+-|.. .-..|+|..+.|..+.|.|-||+..|..++.-+
T Consensus 361 ~~F~~GMKLEAvD~~np~---~IcvATV~~v~~~~l~v~fDgw~~~~d~w~~~~ 411 (437)
T 3feo_A 361 HGFRVGMKLEAVDLMEPR---LICVATVTRIIHRLLRIHFDGWEEEYDQWVDCE 411 (437)
T ss_dssp CCCCTTCEEEEECTTSTT---CEEEEEEEEEETTEEEEEETTSCGGGCEEEETT
T ss_pred ccCccCCEEEeecCCCCC---cEEEEEEeEEcCCEEEEEECCCCCcCCeEEeCC
Confidence 459999999998766655 455999999999999999999999898876543
No 152
>1i1j_A Melanoma derived growth regulatory protein; SH3 subdomain, hormone/growth factor complex; 1.39A {Homo sapiens} SCOP: b.34.2.1 PDB: 1k0x_A 1hjd_A
Probab=89.94 E-value=0.29 Score=36.32 Aligned_cols=29 Identities=31% Similarity=0.325 Sum_probs=22.9
Q ss_pred CCCCCccCCCeEEEEeecCCCCccc--eeeEEEE
Q psy985 35 TINSGFVENQEVEVFSKATEGESCG--WWKVIVK 66 (191)
Q Consensus 35 ~~~~~~~egdeVEV~sran~~ep~g--WW~a~V~ 66 (191)
.....|..||.|.|+.+.+ ..| ||.|++.
T Consensus 36 ~~ELsf~~GDiI~Vl~k~~---~~g~dWW~G~~~ 66 (108)
T 1i1j_A 36 CRFLTIHRGQVVYVFSKLK---GRGRLFWGGSVQ 66 (108)
T ss_dssp TTBCCBCTTCEEEEEEEEC---GGGTTEEEEEEB
T ss_pred CCccccCCCCEEEEEEecC---CCCCCEEEEEEC
Confidence 3467899999999999843 235 9999976
No 153
>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1
Probab=89.90 E-value=0.45 Score=31.70 Aligned_cols=26 Identities=12% Similarity=0.369 Sum_probs=20.8
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVI 64 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~ 64 (191)
....|..||.|+|..+..+ .|||.|+
T Consensus 26 ~eLs~~~Gd~i~v~~~~~~---~~Ww~g~ 51 (71)
T 1csk_A 26 QDLPFCKGDVLTIVAVTKD---PNWYKAK 51 (71)
T ss_dssp TBCCBCTTCEEEEEEECSS---TTEEEEE
T ss_pred CcCCCCCCCEEEEeECCCC---CCCEEEE
Confidence 4678899999999984332 5899998
No 154
>1ri0_A Hepatoma-derived growth factor; HDGF, HATH domain, PWWP domain, heparin-binding, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.9.2 PDB: 2b8a_A 2nlu_A
Probab=89.83 E-value=0.84 Score=34.05 Aligned_cols=55 Identities=11% Similarity=0.136 Sum_probs=41.5
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEEEEe-------ccEEEEEEeccCCcceeeecCCCcccCC
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVKMIK-------GDFHVVEYLGCQSTFTEIVPPERMRQKN 97 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~~iK-------Gdf~vVey~~~d~~~teIV~~erLR~~n 97 (191)
...++..||-|-+-.+ -..||||+|..+- ..-|.|.|.|.. +| -.|...+|.|-.
T Consensus 16 ~~~~~~~GdlVwaK~k-----GyP~WPa~V~~~p~~~~k~~~~~~~V~FFGt~-~~-awv~~~~l~pf~ 77 (110)
T 1ri0_A 16 RQKEYKCGDLVFAKMK-----GYPHWPARIDEMPEAAVKSTANKYQVFFFGTH-ET-AFLGPKDLFPYE 77 (110)
T ss_dssp CSSSCCTTCEEEEEET-----TEEEEEEEEECCCSSSSCCCSSCEEEEETTTT-EE-EEECSTTEECHH
T ss_pred ccCCCCCCCEEEEEeC-----CCCCCCEEEecccHhhcCCCCCEEEEEEecCC-CE-EEECHHHccchh
Confidence 3568999999999774 4679999998642 347899999754 33 478888888764
No 155
>4b9w_A TDRD1, tudor domain-containing protein 1; replication; HET: 2MR; 2.10A {Mus musculus}
Probab=89.78 E-value=0.66 Score=37.23 Aligned_cols=57 Identities=14% Similarity=0.169 Sum_probs=44.5
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEEEEEec-cEEEEEEeccCCcceeeecCCCcccCCCC
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIVKMIKG-DFHVVEYLGCQSTFTEIVPPERMRQKNTN 99 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKG-df~vVey~~~d~~~teIV~~erLR~~n~n 99 (191)
...+.+|+-+-+....+. .|++|+|..+.+ +-+-|.|. |--.++.|+..+||+..+.
T Consensus 63 ~~~~~~G~~c~a~~~~d~----~wyRa~V~~~~~~~~~~V~~v--DyG~~~~v~~~~l~~l~~~ 120 (201)
T 4b9w_A 63 GFKAEIGRPCCAFFSGDG----NWYRALVKEILPSGNVKVHFV--DYGNVEEVTTDQLQAILPQ 120 (201)
T ss_dssp CCCCCTTCEEEEEETTTT----EEEEEEEEEECTTSCEEEEET--TTCCEEEECGGGEEECCGG
T ss_pred CCCCCCCCEEEEEECCCC----eEEEEEEEEECCCCeEEEEEE--ccCCEEEEEHHHhccChHh
Confidence 356789999988764443 599999999864 46788887 5456899999999998754
No 156
>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus} SCOP: b.34.2.1
Probab=89.75 E-value=0.35 Score=32.92 Aligned_cols=27 Identities=15% Similarity=0.188 Sum_probs=21.8
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.. -.|||.|+.
T Consensus 33 ~eLsf~~Gd~i~v~~~~~---~~gWw~g~~ 59 (78)
T 1k1z_A 33 GFLRLNPGDIVELTKAEA---EHNWWEGRN 59 (78)
T ss_dssp CCCCBCTTCEEEEEECCS---SCSCEEEEE
T ss_pred CccCCCCCCEEEEEEcCC---CCCeEEEEE
Confidence 467899999999999742 348999985
No 157
>3h6z_A Polycomb protein SFMBT; MBT, MBR repeat, aromatic CAGE, chromatin regulator, DNA-BIN metal-binding, nucleus, repressor, transcription; HET: MLZ SUC; 2.80A {Drosophila melanogaster}
Probab=89.73 E-value=0.96 Score=41.55 Aligned_cols=52 Identities=15% Similarity=0.147 Sum_probs=44.7
Q ss_pred CCccCCCeEEEEeecCCCCccceeeEEEEEEeccEEEEEEeccCCcceeeecCCC
Q psy985 38 SGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGCQSTFTEIVPPER 92 (191)
Q Consensus 38 ~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGdf~vVey~~~d~~~teIV~~er 92 (191)
..|.+|+..|+--+-| |.-.+.|+|..++|+..-|.|-||+..|.+++..+.
T Consensus 375 ~~F~~gmkLEAvD~~n---p~~icvATV~~v~~~~~~i~fDgw~~~~d~w~~~~S 426 (447)
T 3h6z_A 375 HGFEVGMSLECADLMD---PRLVCVATVARVVGRLLKVHFDGWTDEYDQWLDCES 426 (447)
T ss_dssp CCCCTTCEEEEECTTS---TTCEEEEEEEEEETTEEEEECTTSCGGGCEEEETTC
T ss_pred CccccCCEEEeecCCC---CCcEEEEEEeEecCCEEEEEeCCCCCcCCEEEecCC
Confidence 4799999999976555 566679999999999999999999999999986553
No 158
>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.68 E-value=0.4 Score=31.69 Aligned_cols=27 Identities=19% Similarity=0.418 Sum_probs=22.4
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
....|..||.|+|..+.+ .|||.|+..
T Consensus 22 ~eLs~~~Gd~i~v~~~~~----~gW~~g~~~ 48 (70)
T 2ct3_A 22 DELELREGDRVDVMQQCD----DGWFVGVSR 48 (70)
T ss_dssp TBCCBCTTEEEEEEEECS----SSCEEEEES
T ss_pred CCccCCCCCEEEEEEECC----CCEEEEEEC
Confidence 467899999999998764 589999764
No 159
>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.64 E-value=0.38 Score=32.86 Aligned_cols=28 Identities=21% Similarity=0.214 Sum_probs=22.7
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
....|..||.|+|..+.+ ..|||.|+..
T Consensus 28 ~eLs~~~Gd~i~v~~~~~---~~~Ww~g~~~ 55 (78)
T 2dl5_A 28 DELTIEEHEVLEVIEDGD---MEDWVKARNK 55 (78)
T ss_dssp TBCCBCSSEEEEEEECCS---SSSEEEEECT
T ss_pred CCCCCCCCCEEEEEeccC---CCCcEEEEeC
Confidence 467899999999999764 3589999764
No 160
>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens}
Probab=89.54 E-value=0.12 Score=36.24 Aligned_cols=26 Identities=15% Similarity=0.332 Sum_probs=21.8
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|.|..+.+ .|||.|++
T Consensus 33 ~eLsf~~Gd~I~Vl~~~~----~gWw~g~~ 58 (79)
T 1z9q_A 33 LELNFKAGDVIFLLSRIN----KDWLEGTV 58 (79)
T ss_dssp TBCCCCTTCCBCCCEESS----SSEEEEEE
T ss_pred CcccccCCCEEEEeEecC----CCEEEEEE
Confidence 467889999999998854 58999985
No 161
>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.47 E-value=0.23 Score=33.10 Aligned_cols=27 Identities=26% Similarity=0.558 Sum_probs=22.2
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
....|..||.|+|..+.+ .|||.|+..
T Consensus 23 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~~~ 49 (70)
T 2ega_A 23 SELSLQAGEVVDVIEKNE----SGWWFVSTS 49 (70)
T ss_dssp SSCCCCTTCBCEEEEECT----TSEEEEECS
T ss_pred CcccCCCCCEEEEEEccC----CCeEEEEEC
Confidence 467899999999999754 689999743
No 162
>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A
Probab=89.46 E-value=0.34 Score=32.16 Aligned_cols=26 Identities=15% Similarity=0.253 Sum_probs=21.1
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
...|..||.|+|..+.. -.|||.|+.
T Consensus 26 eLsf~~Gd~i~v~~~~~---~~~Ww~g~~ 51 (70)
T 1gcq_C 26 FLRLNPGDIVELTKAEA---EHNWWEGRN 51 (70)
T ss_dssp BCCBCTTCEEEEEECCT---TCSEEEEEE
T ss_pred cCCcCCCCEEEEEeCCC---CCCCeEEEe
Confidence 67899999999999742 248999974
No 163
>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A
Probab=89.40 E-value=0.6 Score=29.79 Aligned_cols=27 Identities=15% Similarity=0.357 Sum_probs=21.6
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.+ ..|||.|+.
T Consensus 17 ~eLs~~~Gd~i~v~~~~~---~~~Ww~g~~ 43 (60)
T 2v1q_A 17 DELTIKSGDKVYILDDKK---SKDWWMCQL 43 (60)
T ss_dssp TBCCBCTTCEEEEEESSS---CSSEEEEEE
T ss_pred CCccCCCCCEEEEEeCCC---CCCCEEEEE
Confidence 467899999999998642 358999986
No 164
>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=89.40 E-value=0.46 Score=31.99 Aligned_cols=27 Identities=19% Similarity=0.484 Sum_probs=22.6
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
....|..||.|.|..+.+ .|||.|+..
T Consensus 22 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~~~ 48 (77)
T 2d8j_A 22 EDLSFRAGDKLQVLDTSH----EGWWLARHL 48 (77)
T ss_dssp SBCCBCTTCCEEEEECCS----SSEEEEEEC
T ss_pred CccCCCCCCEEEEEECCC----CCeEEEEEC
Confidence 467899999999999753 589999876
No 165
>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.37 E-value=0.48 Score=31.86 Aligned_cols=28 Identities=25% Similarity=0.528 Sum_probs=22.4
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.++ -.|||.|+.
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~--~~~Ww~g~~ 49 (73)
T 2dm1_A 22 RELSLREGDVVRIYSRIGG--DQGWWKGET 49 (73)
T ss_dssp TBCCBCTTCEEECCBSSSS--SSSCEEEEE
T ss_pred CcCCCCCCCEEEEEEecCC--CCCeEEEEE
Confidence 4678999999999987542 348999985
No 166
>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A
Probab=89.35 E-value=0.076 Score=35.69 Aligned_cols=27 Identities=19% Similarity=0.453 Sum_probs=22.1
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
....|..||.|.|..+.++ |||.|+..
T Consensus 21 ~eLs~~~Gd~i~v~~~~~~----~Ww~g~~~ 47 (71)
T 1hsq_A 21 DELTFIKSAIIQNVEKQEG----GWWRGDYG 47 (71)
T ss_dssp SSCCCCTTCCCBSCCCBTT----TEECCBCS
T ss_pred CccCCCCCCEEEEEEecCC----CEEEEEEC
Confidence 4678999999999987543 89999863
No 167
>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.33 E-value=0.49 Score=31.28 Aligned_cols=26 Identities=19% Similarity=0.346 Sum_probs=21.6
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+. ..|||.|+.
T Consensus 22 ~eLs~~~Gd~i~v~~~~----~~~Ww~g~~ 47 (68)
T 1x2k_A 22 DELYFEEGDIIYITDMS----DTNWWKGTS 47 (68)
T ss_dssp TBCCCCSSCEEEEEECS----CSSEEEEES
T ss_pred CcccCCCCCEEEEEEcC----CCCEEEEEE
Confidence 46789999999999873 368999985
No 168
>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A
Probab=89.32 E-value=0.41 Score=32.28 Aligned_cols=24 Identities=17% Similarity=0.493 Sum_probs=20.4
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVI 64 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~ 64 (191)
....|..||.|+|..+ + .|||.|+
T Consensus 19 ~ELsf~~Gd~i~vl~~-~----~~Ww~~~ 42 (67)
T 2b86_A 19 QELDIKKNERLWLLDD-S----KTWWRVR 42 (67)
T ss_dssp TSCCBCTTCEEEEEEC-S----SSSCEEE
T ss_pred CccccCCCCEEEEEec-C----CCeEEEE
Confidence 4678999999999987 2 4999997
No 169
>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}
Probab=89.27 E-value=0.44 Score=31.47 Aligned_cols=27 Identities=19% Similarity=0.363 Sum_probs=22.3
Q ss_pred CCCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 35 TINSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 35 ~~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
+....|..||.|.|..+.+ .|||.|+.
T Consensus 20 ~~eLs~~~Gd~i~v~~~~~----~~Ww~g~~ 46 (69)
T 4esr_A 20 SDELTIHRGDIIRVFFKDN----EDWWYGSI 46 (69)
T ss_dssp TTBCCBCTTCEEEEEEECS----SSEEEEEE
T ss_pred cCcCCCCCCCEEEEEEecC----CCeEEEEe
Confidence 3467899999999998764 47999976
No 170
>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}
Probab=89.25 E-value=0.27 Score=32.65 Aligned_cols=29 Identities=21% Similarity=0.455 Sum_probs=22.5
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|.|..+.++ ...|||.|+.
T Consensus 18 ~eLs~~~Gd~i~v~~~~~~-~~~~Ww~g~~ 46 (69)
T 1wyx_A 18 DELSFRKGDIMTVLEQDTQ-GLDGWWLCSL 46 (69)
T ss_dssp TBCCBCTTCEEEEEETTGG-GCTTEEEEEE
T ss_pred CccCCcCCCEEEEeECCCC-CCCCcEEEEE
Confidence 4678999999999997632 1358999984
No 171
>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A
Probab=89.17 E-value=0.2 Score=34.12 Aligned_cols=27 Identities=19% Similarity=0.407 Sum_probs=21.5
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
....|..||.|+|..+.+ .|||.|+..
T Consensus 25 ~eLsf~~Gd~i~v~~~~~----~~Ww~g~~~ 51 (76)
T 2ed1_A 25 DELTFIEGEVIIVTGEED----QEWWIGHIE 51 (76)
T ss_dssp SBCCCCSSCEEEESSCCS----SSEEEEEET
T ss_pred CCcCcCCCCEEEEEEecC----CCEEEEEEC
Confidence 467899999999987533 579999864
No 172
>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A
Probab=89.14 E-value=0.41 Score=33.00 Aligned_cols=25 Identities=20% Similarity=0.542 Sum_probs=21.2
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+. .|||.|+.
T Consensus 40 ~eLs~~~Gd~i~v~~~~-----~~Ww~g~~ 64 (86)
T 2oi3_A 40 EDLSFQKGDQMVVLEES-----GEWWKARS 64 (86)
T ss_dssp SCCCCCTTCEEEEEEES-----SSEEEEEE
T ss_pred CcCcCCCCCEEEEEEcC-----CCeEEEEE
Confidence 45778999999999976 28999987
No 173
>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens}
Probab=89.08 E-value=0.2 Score=35.97 Aligned_cols=27 Identities=19% Similarity=0.471 Sum_probs=22.0
Q ss_pred CCCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 35 TINSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 35 ~~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
+....|..||.|+|..+. ..|||.|+.
T Consensus 32 ~~eLsf~~Gd~i~V~~~~----~~gWw~g~~ 58 (92)
T 2o2o_A 32 DDELELKVGDIIEVVGEV----EEGWWEGVL 58 (92)
T ss_dssp SSCCCBCSSCEEECCCGG----GSSCBCCEE
T ss_pred CccccccCCCEEEEeEec----CCCEEEEEE
Confidence 357889999999999764 358999985
No 174
>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A
Probab=89.05 E-value=0.46 Score=32.00 Aligned_cols=28 Identities=21% Similarity=0.413 Sum_probs=22.2
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.. ...|||.|+.
T Consensus 17 ~eLs~~~Gd~i~vl~~~~--~~~gWw~g~~ 44 (69)
T 2ydl_A 17 DELTIKEGDIVTLINKDC--IDVGWWEGEL 44 (69)
T ss_dssp TBCCBCTTCEEEEEESCC--SSTTEEEEEE
T ss_pred CccccCCCCEEEEEEcCC--CCCCEEEEEE
Confidence 468899999999998752 1358999985
No 175
>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}
Probab=88.92 E-value=0.48 Score=30.16 Aligned_cols=27 Identities=19% Similarity=0.155 Sum_probs=21.7
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
....|..||.|.|..+. ..|||.|+..
T Consensus 16 ~eLs~~~Gd~i~v~~~~----~~gW~~g~~~ 42 (59)
T 1yn8_A 16 NELRLAEGDIVFISYKH----GQGWLVAENE 42 (59)
T ss_dssp TBCCBCTTCEEEEEEEE----ETTEEEEECT
T ss_pred CCcCCCCCCEEEEEEcC----CCCeEEEEEC
Confidence 46789999999998874 3589999754
No 176
>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1
Probab=88.90 E-value=0.41 Score=31.43 Aligned_cols=25 Identities=16% Similarity=0.445 Sum_probs=21.0
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVI 64 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~ 64 (191)
....|..||.|.|..+.+ .|||.|+
T Consensus 4 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~ 28 (63)
T 1tuc_A 4 REVTMKKGDILTLLNSTN----KDWWKVE 28 (63)
T ss_dssp CCCCBCTTCEEEEEECCS----SSEEEEE
T ss_pred cccCCCCCCEEEEEEecC----CCEEEEE
Confidence 357889999999999764 5799996
No 177
>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens}
Probab=88.87 E-value=0.52 Score=31.67 Aligned_cols=25 Identities=16% Similarity=0.447 Sum_probs=20.6
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|.|..+ + .|||.|+.
T Consensus 22 ~eLs~~~Gd~i~v~~~--~---~~Ww~g~~ 46 (72)
T 2jw4_A 22 QELDIKKNERLWLLDD--S---KSWWRVRN 46 (72)
T ss_dssp TSCCCCTTCEEEEEEC--S---SSSEEEEC
T ss_pred CcccCCCCCEEEEEEC--C---CCEEEEEE
Confidence 4678999999999985 2 38999974
No 178
>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}
Probab=88.82 E-value=0.48 Score=31.35 Aligned_cols=27 Identities=22% Similarity=0.442 Sum_probs=22.2
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
....|..||.|+|..+. ..|||.|+..
T Consensus 23 ~eLs~~~Gd~i~v~~~~----~~~Ww~g~~~ 49 (69)
T 2dil_A 23 DELDLSAGDILEVILEG----EDGWWTVERN 49 (69)
T ss_dssp SSCCBCTTCEEEEEECC----SSSEEEEEET
T ss_pred CccCCCCCCEEEEEECC----CCCEEEEEEC
Confidence 46789999999999873 3589999863
No 179
>3f70_A Lethal(3)malignant brain tumor-like 2 protein; MBT, chromatin regulator, metal-binding, nucleus, transcript transcription regulation, zinc-finger; HET: MLZ; 2.10A {Homo sapiens} PDB: 3dbb_A* 3cey_A
Probab=88.70 E-value=0.61 Score=42.95 Aligned_cols=70 Identities=17% Similarity=0.166 Sum_probs=49.0
Q ss_pred CcccccCCCCCCCCCccCCCeEEEEeecCCCCccceeeEEEEEEeccEEEEEEeccC--Ccceee--ecCCCcccCC
Q psy985 25 FSMVRLPPRETINSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGCQ--STFTEI--VPPERMRQKN 97 (191)
Q Consensus 25 f~~VRlPP~~~~~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGdf~vVey~~~d--~~~teI--V~~erLR~~n 97 (191)
|.++.+++ ..-.|.+|+.+||--..+...+...|.|.|.++-|--....|.|.+ ..+.=. +...+|+|+.
T Consensus 29 F~~~~~~~---~~~~~~~GmklEv~d~~~~~~~~~~WvAtV~~~~G~rL~Lry~G~~~d~~~DFW~~~~s~~ihPvG 102 (456)
T 3f70_A 29 FKHVPLYD---QWEDVMKGMKVEVLNSDAVLPSRVYWIASVIQTAGYRVLLRYEGFENDASHDFWCNLGTVDVHPIG 102 (456)
T ss_dssp CTTSTTGG---GGGGCCTTCEEEEECCSCCC--CCEEEEEEEEEETTEEEEEETTCTTCCTTCEEEETTSTTEECTT
T ss_pred hhcccccC---ccccccCCCEEEEecCCCCCCccceEEEEEeeecceeEEEEecccCCCCcCCcceeCCCCceeecc
Confidence 44554443 2246999999999987665556789999999999999999999985 233322 3344666654
No 180
>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens}
Probab=88.65 E-value=0.56 Score=31.07 Aligned_cols=25 Identities=24% Similarity=0.501 Sum_probs=21.1
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+ + .|||.|+.
T Consensus 22 ~eLs~~~Gd~i~v~~~--~---~~Ww~~~~ 46 (68)
T 1wxt_A 22 RELTVVQGEKLEVLDH--S---KRWWLVKN 46 (68)
T ss_dssp SBCCBCTTCEEEEEEC--S---SSEEEEEC
T ss_pred CcCCCCCCCEEEEEEc--C---CCEEEEEE
Confidence 4678999999999987 2 68999974
No 181
>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic}
Probab=88.57 E-value=0.5 Score=31.79 Aligned_cols=25 Identities=16% Similarity=0.445 Sum_probs=21.4
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVI 64 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~ 64 (191)
....|..||.|.|..+.+ .|||.|+
T Consensus 14 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~ 38 (73)
T 2kxd_A 14 REVTMKKGDILTLLNSTN----KDWWKVE 38 (73)
T ss_dssp CCCCBCTTCEEEEEECCS----SSEEEEE
T ss_pred CEeeEcCCCEEEEEEecC----CCEEEEE
Confidence 468899999999999764 5899997
No 182
>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.52 E-value=0.27 Score=32.49 Aligned_cols=26 Identities=15% Similarity=0.491 Sum_probs=21.7
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.+ .|||.|+.
T Consensus 22 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~~ 47 (68)
T 1x2p_A 22 TQLSFLRGEKILILRQTT----ADWWWGER 47 (68)
T ss_dssp TBCCCCTTCEEEEEECCS----SSEEEEEC
T ss_pred CCcCCCCCCEEEEEEcCC----CCEEEEEE
Confidence 467889999999999763 58999974
No 183
>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A
Probab=88.44 E-value=0.38 Score=31.03 Aligned_cols=24 Identities=21% Similarity=0.587 Sum_probs=20.4
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVI 64 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~ 64 (191)
....|..||.|+|..+ ..|||.|+
T Consensus 16 ~eLs~~~Gd~i~v~~~-----~~~Ww~~~ 39 (60)
T 1i07_A 16 SELSVMKDDVLEILDD-----RRQWWKVR 39 (60)
T ss_dssp TBCCBCTTCEEEECGG-----GCCEEEEE
T ss_pred CcccCCCCCEEEEEEc-----CCCeEEEE
Confidence 4678999999999987 35899996
No 184
>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A
Probab=88.35 E-value=0.61 Score=30.97 Aligned_cols=25 Identities=24% Similarity=0.482 Sum_probs=20.8
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|+.+. .+||.|+.
T Consensus 23 ~eLs~~~Gd~i~v~~~~-----~~Ww~~~~ 47 (68)
T 2k2m_A 23 SELSVKQRDVLEVLDDS-----RKWWKVRD 47 (68)
T ss_dssp SBCCBCTTCEEEEEECS-----SSEEEEEC
T ss_pred CcccCCCCCEEEEEEcC-----CCeEEEEe
Confidence 46789999999999962 58999975
No 185
>4b9x_A TDRD1, tudor domain-containing protein 1; replication; 2.80A {Mus musculus}
Probab=88.30 E-value=1 Score=36.83 Aligned_cols=57 Identities=14% Similarity=0.172 Sum_probs=44.1
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEEEEEecc-EEEEEEeccCCcceeeecCCCcccCCCC
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGD-FHVVEYLGCQSTFTEIVPPERMRQKNTN 99 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGd-f~vVey~~~d~~~teIV~~erLR~~n~n 99 (191)
...+..|+-+-+....+. .|++|+|..+.++ -+-|.|. |--.++.|+...||+..+.
T Consensus 63 ~~~~~~G~~c~a~~~~d~----~WyRa~V~~~~~~~~~~V~~v--DyGn~~~v~~~~l~~l~~~ 120 (226)
T 4b9x_A 63 GFKAEIGRPCCAFFSGDG----NWYRALVKEILPSGNVKVHFV--DYGNVEEVTTDQLQAILPQ 120 (226)
T ss_dssp -CCCCTTCEEEEEETTTT----EEEEEEEEEECSSSEEEEECT--TTCCEEEEEGGGEECCCGG
T ss_pred CCCCCCCCEEEEEECCCC----eEEEEEEEEECCCCeEEEEEE--ecCCEEEEEHHHhccChHH
Confidence 356788999988664443 5999999998644 7788887 5556899999999998754
No 186
>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens}
Probab=88.29 E-value=0.5 Score=33.00 Aligned_cols=25 Identities=16% Similarity=0.444 Sum_probs=20.2
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+ + .|||.|+.
T Consensus 46 ~eLs~~~Gd~i~v~~~-~----~~Ww~g~~ 70 (86)
T 2jxb_A 46 QELDIKKNERLWLLDD-S----KTWWRVRN 70 (86)
T ss_dssp SBCCCCTTEEEEEEEC-C----SSEEEEEC
T ss_pred CEeccCCCCEEEEEec-C----CCeEEEEE
Confidence 4567899999999986 2 39999973
No 187
>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.29 E-value=0.58 Score=31.75 Aligned_cols=27 Identities=30% Similarity=0.710 Sum_probs=22.2
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
....|..||.|+|..+. ..|||.|+..
T Consensus 24 ~eLs~~~Gd~i~vl~~~----~~gWw~g~~~ 50 (75)
T 2egc_A 24 ETAGFQEGVSMEVLERN----PNGWWYCQIL 50 (75)
T ss_dssp SSCCBCTTCEEEECEEC----TTSEEEEEEC
T ss_pred CcCCCCCCCEEEEEEcC----CCCeEEEEeC
Confidence 36789999999999875 4589999874
No 188
>3f70_A Lethal(3)malignant brain tumor-like 2 protein; MBT, chromatin regulator, metal-binding, nucleus, transcript transcription regulation, zinc-finger; HET: MLZ; 2.10A {Homo sapiens} PDB: 3dbb_A* 3cey_A
Probab=88.29 E-value=1.3 Score=40.67 Aligned_cols=50 Identities=16% Similarity=0.161 Sum_probs=43.0
Q ss_pred CCccCCCeEEEEeecCCCCccceeeEEEEEEeccEEEEEEeccCCcceeeecC
Q psy985 38 SGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGCQSTFTEIVPP 90 (191)
Q Consensus 38 ~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGdf~vVey~~~d~~~teIV~~ 90 (191)
..|.+|+..|+--+-| |.-.+.|.|..+.|....|.|-||+..|.+++.-
T Consensus 365 ~~F~~GMKLEAvD~~n---p~~icvATV~~v~~~~l~i~fDgw~~~~d~w~~~ 414 (456)
T 3f70_A 365 HGFKVGMKLEAVDLME---PRLICVATVKRVVHRLLSIHFDGWDSEYDQWVDC 414 (456)
T ss_dssp CCCCTTCEEEEECTTS---TTCEEEEEEEEEETTEEEEEETTSCGGGCEEEET
T ss_pred cccccCCEEEeecCCC---CCcEEEEEEEEecCCEEEEEeCCCCCCCCeEeec
Confidence 4599999999975555 5566799999999999999999999999988764
No 189
>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens}
Probab=88.26 E-value=0.3 Score=32.19 Aligned_cols=28 Identities=14% Similarity=0.220 Sum_probs=22.2
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
....|..||.|+|..+. ...|||.|+..
T Consensus 22 ~eLs~~~Gd~i~v~~~~---~~~~Ww~g~~~ 49 (67)
T 2kxc_A 22 TLLSFAQGDVITLLIPE---EKDGWLYGEHD 49 (67)
T ss_dssp SBCCBCTTCEEEESSSS---CBTTEEEEEES
T ss_pred CCCcCCCCCEEEEeECC---CCCCcEEEEEC
Confidence 46889999999998753 24589999865
No 190
>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A
Probab=88.25 E-value=0.61 Score=29.99 Aligned_cols=28 Identities=7% Similarity=0.210 Sum_probs=22.3
Q ss_pred CCCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 35 TINSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 35 ~~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
+....|..||.|.|..+.++ .+||.|+.
T Consensus 19 ~~eLs~~~Gd~i~v~~~~~~---~~W~~~~~ 46 (63)
T 3eg3_A 19 DNTLSITKGEKLRVLGYNHN---GEWCEAQT 46 (63)
T ss_dssp SSBCCBCTTCEEEEEEECTT---SSEEEEEE
T ss_pred CCccCCCCCCEEEEEEeCCC---CCeEEEEE
Confidence 34688999999999997433 46999987
No 191
>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A
Probab=88.15 E-value=0.62 Score=32.61 Aligned_cols=29 Identities=21% Similarity=0.471 Sum_probs=23.5
Q ss_pred CCCccCCCeEEEEeecCCC-CccceeeEEE
Q psy985 37 NSGFVENQEVEVFSKATEG-ESCGWWKVIV 65 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~-ep~gWW~a~V 65 (191)
...|..||.|.|..+.++. .-.|||.|+.
T Consensus 31 eLsf~~Gd~i~v~~~~~~~~~~~gWw~g~~ 60 (92)
T 1jqq_A 31 EVALKKGDLMAILSKKDPLGRDSDWWKVRT 60 (92)
T ss_dssp BCCBCTTCEEEEEEEECTTSCEEEEEEEEE
T ss_pred CcCCCCCCEEEEEECCCCCCCCCCCeEEEe
Confidence 6778999999999987652 2469999986
No 192
>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.13 E-value=0.24 Score=33.23 Aligned_cols=25 Identities=20% Similarity=0.300 Sum_probs=20.9
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVI 64 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~ 64 (191)
....|..||.|+|..+.+ .|||.|+
T Consensus 23 ~eLsf~~Gd~i~v~~~~~----~~W~~g~ 47 (71)
T 2gqi_A 23 DEISFLKGDMFIVHNELE----DGWMWVT 47 (71)
T ss_dssp SCCCCCTTCBCCCCEECS----SSCEEEE
T ss_pred CCCCCCCCCEEEEEEecC----CCEEEEE
Confidence 467899999999998754 3899997
No 193
>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 3ua7_A 3ua6_A 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A ...
Probab=88.11 E-value=0.62 Score=32.49 Aligned_cols=26 Identities=12% Similarity=0.491 Sum_probs=22.1
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|.|..+.+ .|||.|+.
T Consensus 21 ~eLsf~~Gd~i~vl~~~~----~~Ww~g~~ 46 (84)
T 4ag1_C 21 TDLSFHKGEKFQILEFGP----GDWWEARS 46 (84)
T ss_dssp TBCCBCTTCEEEEEECCS----SSEEEEEE
T ss_pred CcccccCCCEEEEEEecC----CCeEEEEE
Confidence 468899999999999764 57999987
No 194
>3a98_A DOCK2, dedicator of cytokinesis protein 2; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens}
Probab=88.05 E-value=0.72 Score=36.82 Aligned_cols=26 Identities=8% Similarity=0.221 Sum_probs=21.7
Q ss_pred CCCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 35 TINSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 35 ~~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
+....|..||.|.|+.+.+ |||.|+.
T Consensus 31 ~~eLs~~~Gd~i~v~~~~~-----~W~~g~~ 56 (184)
T 3a98_A 31 APQLSLQIGDVVRIQETCG-----DWYRGYL 56 (184)
T ss_dssp TTBCCBCTTCEEEEEEEET-----TEEEEEE
T ss_pred CCCCCcCCCCEEEEEecCC-----CEEEEEE
Confidence 3567899999999998743 6999998
No 195
>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=88.01 E-value=0.37 Score=34.33 Aligned_cols=30 Identities=20% Similarity=0.397 Sum_probs=22.3
Q ss_pred CCCCccCCCeEEEEeecCCC-CccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEG-ESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~-ep~gWW~a~V 65 (191)
....|..||.|+|..+.++. .-.|||.|+.
T Consensus 44 ~ELsf~~GD~I~Vl~~~~~~~~~~gWw~g~~ 74 (89)
T 2rf0_A 44 EELTLRRGDRVQVLSQDCAVSGDEGWWTGQL 74 (89)
T ss_dssp TBCCBCTTCEEEEEECCHHHHSSTTEEEEEC
T ss_pred CccccCCCCEEEEEeccCCcccCCCEEEEEE
Confidence 46788999999999975210 1358999986
No 196
>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.84 E-value=0.34 Score=32.15 Aligned_cols=29 Identities=24% Similarity=0.613 Sum_probs=22.5
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.++ ...|||.|+.
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~-~~~~Ww~g~~ 50 (71)
T 2cre_A 22 DELAFSRGDILTILEQHVP-ESEGWWKCLL 50 (71)
T ss_dssp SBCCCCSSCCEEEEESCCT-TSTTEEEEES
T ss_pred CCCCCCCCCEEEEeEcCCC-CCCCcEEEEE
Confidence 4678999999999997522 2468999983
No 197
>3jv3_A Intersectin-1; SH3 domain, DH domain, guanine nucleotide exchange factor, autoinhibition, domain-swapped, cell junction, cell project endocytosis; 2.40A {Mus musculus} PDB: 3gf9_A
Probab=87.83 E-value=0.43 Score=39.24 Aligned_cols=26 Identities=31% Similarity=0.547 Sum_probs=22.0
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.+ .|||.|+.
T Consensus 17 ~el~~~~gd~i~v~~~~~----~~w~~~~~ 42 (283)
T 3jv3_A 17 DELAFSKGQIINVLNKED----PDWWKGEV 42 (283)
T ss_dssp TBCCBCTTCEEEEEECCS----TTEEEEEE
T ss_pred CcCCCCCCCEEEEEecCC----CCEEEEEE
Confidence 468899999999999864 47999974
No 198
>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.72 E-value=0.69 Score=30.63 Aligned_cols=25 Identities=20% Similarity=0.521 Sum_probs=20.8
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|.|+.+ + .+||.|+-
T Consensus 22 ~eLs~~~Gd~i~v~~~--~---~~Ww~~~~ 46 (68)
T 1wxb_A 22 NELSVLKDEVLEVLED--G---RQWWKLRS 46 (68)
T ss_dssp SBCCBCTTCEEEEEEC--S---SSEEEEEC
T ss_pred CccCCCCCCEEEEEEc--C---CCEEEEEE
Confidence 4678999999999986 1 68999974
No 199
>2l89_A PWWP domain-containing protein 1; histone binding, protein binding; NMR {Schizosaccharomyces pombe}
Probab=87.68 E-value=0.84 Score=33.83 Aligned_cols=55 Identities=11% Similarity=0.182 Sum_probs=40.6
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEEEE---E--------e-ccEEEEEEeccCCcceeeecCCCcccCCC
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIVKM---I--------K-GDFHVVEYLGCQSTFTEIVPPERMRQKNT 98 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V~~---i--------K-Gdf~vVey~~~d~~~teIV~~erLR~~n~ 98 (191)
..++..||-|-+-.+ -..||||+|.. + + +..|.|.|.|. .+| -.|...+|.|-..
T Consensus 3 ~~~~~~GdlVwaK~~-----gyP~WPa~V~~~~~~p~~v~~~~~~~~~~~V~FFg~-~~~-aWv~~~~l~p~~~ 69 (108)
T 2l89_A 3 DDRLNFGDRILVKAP-----GYPWWPALLLRRKETKDSLNTNSSFNVLYKVLFFPD-FNF-AWVKRNSVKPLLD 69 (108)
T ss_dssp SCCCCTTEEEEEECS-----SSCEEEEEEEEEEEEESSSCSSSCEEEEEEEEETTT-TEE-EEECGGGEEECCH
T ss_pred CCcccCCCEEEEEeC-----CcCCCceEecCcccCcHHHhhccCCCCeEEEEECCC-CCE-EEEchhhceeCCH
Confidence 468899999988775 46799999943 2 2 34799999884 334 7788888887653
No 200
>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=87.67 E-value=0.31 Score=33.03 Aligned_cols=26 Identities=15% Similarity=0.348 Sum_probs=21.5
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.+ .|||.|+.
T Consensus 25 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~~ 50 (76)
T 1ujy_A 25 DELSVCKGDIIYVTRVEE----GGWWEGTL 50 (76)
T ss_dssp TSCCBCSSCCEEESSCCS----SSCEEEEE
T ss_pred CcccCCCCCEEEEEEecC----CCEEEEEE
Confidence 468899999999987643 58999985
No 201
>2qnd_A FMR1 protein; KH domain, eukaryotic KH domains, tandem KH domains, type I domains, fragIle X mental retardation protein, RNA BI protein; 1.90A {Homo sapiens} PDB: 2fmr_A
Probab=87.67 E-value=0.66 Score=35.78 Aligned_cols=66 Identities=17% Similarity=0.145 Sum_probs=49.4
Q ss_pred EEeecCChhHHHHHHhh--hchHHHHHhhhccEEEEcC--CCC-------eeEEEeCchhhHhhhhhhhhhhhhhHH
Q psy985 109 KFDIEVPLDVQEFAKME--GAHKDFQKAIAAAIVRYIP--DKG-------ALSVISRDEACQKRASMIKDMHFRNLN 174 (191)
Q Consensus 109 k~~i~VPedLre~~~~~--~~h~dF~kaiga~~v~y~p--e~~-------~Lvvls~~e~~~kRA~mL~dmHfr~Lr 174 (191)
..++.||++..-.+==- ..-++.++..|+..+...+ +.+ .-+.|+++...+.+|..|.++|+.+|+
T Consensus 68 e~~v~Vp~~~~g~~IGK~G~nIr~i~~~tG~~~I~i~~~~~~~~~~~~~~~~vtI~G~~~~v~~Ak~li~~~l~~l~ 144 (144)
T 2qnd_A 68 EDVIQVPRNLVGKVIGKNGKLIQEIVDKSGVVRVRIEAENEKNVPQEEGMVPFVFVGTKDSIANATVLLDYHLNYLK 144 (144)
T ss_dssp EEEEEEEGGGHHHHHCGGGHHHHHHHHHHTCSEEEEEEECTTCCCCCTTEEEEEEEEEHHHHHHHHHHHHHHHHTCC
T ss_pred eEEEEECHHHcCeeECCCCHHHHHHHHHHCCEEEEEcCCCCCCccccCCeeEEEEEeCHHHHHHHHHHHHHHHHhcC
Confidence 37899999988876443 3445889999986554443 222 236788999999999999999999874
No 202
>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1
Probab=87.39 E-value=0.39 Score=32.10 Aligned_cols=28 Identities=14% Similarity=0.204 Sum_probs=22.2
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
....|..||.|+|..+. ...|||.|+..
T Consensus 23 ~eLs~~~Gd~i~v~~~~---~~~gWw~g~~~ 50 (72)
T 1spk_A 23 TLLSFAQGDVLTLLIPE---EKDGWLYGEHD 50 (72)
T ss_dssp SBCCBCTTCEEEECCSS---CBTTEEEEEET
T ss_pred CCCcCCCCCEEEEeEcc---CCCCcEEEEEC
Confidence 46889999999998752 34589999865
No 203
>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=87.36 E-value=0.58 Score=31.13 Aligned_cols=26 Identities=15% Similarity=0.363 Sum_probs=20.9
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
....|..||.|+| .+.+ .|||.|+..
T Consensus 25 ~eLs~~~Gd~i~v-~~~~----~~Ww~g~~~ 50 (72)
T 2kgt_A 25 EELSFRAGDVFHV-ARKE----EQWWWATLL 50 (72)
T ss_dssp TSCBCCTTCCEEE-EEEC----SSCEEEEEE
T ss_pred CCcCCCCCCEEEE-eeCC----CCEEEEEEc
Confidence 4678899999999 7643 589999864
No 204
>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.23 E-value=0.39 Score=31.94 Aligned_cols=27 Identities=33% Similarity=0.583 Sum_probs=22.1
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
....|..||.|+|..+.+ .|||.|+..
T Consensus 23 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~~~ 49 (71)
T 2dnu_A 23 DEIGFEKGVTVEVIRKNL----EGWWYIRYL 49 (71)
T ss_dssp TBCCBCTTCEEEECCCCS----SSEEEEEET
T ss_pred CCCcCCCCCEEEEeECCC----CCeEEEEEC
Confidence 467899999999987643 589999876
No 205
>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis, membrane, phagocytosis; NMR {Homo sapiens}
Probab=87.22 E-value=0.43 Score=35.68 Aligned_cols=25 Identities=8% Similarity=0.210 Sum_probs=21.1
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|.+||.|.|..+. -|||.|+.
T Consensus 74 ~eLsf~~Gd~i~vl~~~-----~gWw~g~~ 98 (119)
T 2rqr_A 74 PQLSLQIGDVVRIQETC-----GDWYRGYL 98 (119)
T ss_dssp TBCCBCTTCEEEEEEEE-----TTEEEEEE
T ss_pred CcccCcCCCEEEEEEcC-----CCEEEEEE
Confidence 46778999999999973 28999987
No 206
>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=87.10 E-value=0.72 Score=31.13 Aligned_cols=26 Identities=15% Similarity=0.214 Sum_probs=21.3
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVI 64 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~ 64 (191)
....|..||.|+|..+.. ..|||.|+
T Consensus 25 ~eLs~~~Gd~i~v~~~~~---~~gW~~g~ 50 (77)
T 2enm_A 25 NELTVTEGEIITVTNPNV---GGGWLEGK 50 (77)
T ss_dssp SBCCCCTTCEEEEEESCC---SSSEEEEE
T ss_pred CeecCCCCCEEEEeEccC---CCCeEEEE
Confidence 467899999999999742 25899998
No 207
>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1
Probab=87.07 E-value=0.53 Score=30.95 Aligned_cols=26 Identities=15% Similarity=0.199 Sum_probs=20.1
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
...|..||.|.|..+. ...|||.|+.
T Consensus 24 ~Lsf~~Gd~i~v~~~~---~~~gW~~g~~ 49 (67)
T 3rnj_A 24 LLSFKEGDLITLLVPE---ARDGWHYGES 49 (67)
T ss_dssp BCCBCTTCEEEECSSS---CBTTEEEEEE
T ss_pred CccCCCCCEEEEeecc---CCCCCEEEEE
Confidence 3789999999998642 3349999983
No 208
>1h3z_A Hypothetical 62.8 kDa protein C215.07C; nuclear protein, PWWP, chromatin, beta-barrel; NMR {Schizosaccharomyces pombe} SCOP: b.34.9.2
Probab=87.02 E-value=0.88 Score=33.50 Aligned_cols=54 Identities=15% Similarity=0.294 Sum_probs=41.4
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEEEE----E------e----ccEEEEEEeccCCcceeeecCCCcccCC
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIVKM----I------K----GDFHVVEYLGCQSTFTEIVPPERMRQKN 97 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V~~----i------K----Gdf~vVey~~~d~~~teIV~~erLR~~n 97 (191)
..++..||-|-+-.+ -..||+|+|.. . + +..|.|.|.|.. +| -.|...+|.|-.
T Consensus 4 ~~~~~~GdlVwaK~~-----gyP~WPa~V~~p~~~~~~~~~~~~~~~~~~~~V~FFg~~-~~-aWv~~~~l~p~~ 71 (109)
T 1h3z_A 4 RVNYKPGMRVLTKMS-----GFPWWPSMVVTESKMTSVARKSKPKRAGTFYPVIFFPNK-EY-LWTGSDSLTPLT 71 (109)
T ss_dssp CCCCCTTCEEEEEET-----TEEEEEEEECCGGGCCHHHHHTCCCSSSCEEEEEETTTT-CC-EEEEGGGEEECC
T ss_pred cccCCCCCEEEEEeC-----CcCCCCEEEcccHHHhHHhhccCCCCCCCEEEEEEcCCC-CE-EEECHHHeeeCC
Confidence 468899999999874 35799999982 1 1 468999999876 44 778888888765
No 209
>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}
Probab=86.97 E-value=0.64 Score=30.75 Aligned_cols=27 Identities=15% Similarity=0.357 Sum_probs=21.9
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.+ ..|||.|+.
T Consensus 21 ~eLs~~~Gd~i~v~~~~~---~~~Ww~g~~ 47 (71)
T 2jt4_A 21 DELTIKSGDKVYILDDKK---SKDWWMCQL 47 (71)
T ss_dssp TBCCBCTTCEEEEEESSS---CSSEEEEEE
T ss_pred CcccCCCCCEEEEEECCC---CCCCEEEEE
Confidence 467899999999999652 358999986
No 210
>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.97 E-value=0.5 Score=32.27 Aligned_cols=28 Identities=21% Similarity=0.500 Sum_probs=22.6
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|+.+.+. -.|||.|+.
T Consensus 32 ~eLsf~~Gd~i~v~~~~~~--~~~Ww~g~~ 59 (80)
T 2d8h_A 32 GDLNFQAGDRITVISKTDS--HFDWWEGKL 59 (80)
T ss_dssp TBCEECTTCEEEEEECCSC--SSSEEEEEE
T ss_pred CeeeEcCCCEEEEeECcCC--CCCeEEEEE
Confidence 3567899999999997652 358999987
No 211
>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus}
Probab=86.94 E-value=0.25 Score=33.76 Aligned_cols=26 Identities=19% Similarity=0.472 Sum_probs=21.6
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|.|..+.+ .|||.|+.
T Consensus 6 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~~ 31 (77)
T 2jmc_A 6 REVTMKKGDILTLLNSTN----KDWWKVEV 31 (77)
T ss_dssp CCCCCCTTCEEECCCCCC----SSCCCEEE
T ss_pred CccCCCCCCEEEEEEecC----CCEEEEEE
Confidence 467899999999998764 57999973
No 212
>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A 4gbq_A
Probab=86.89 E-value=0.36 Score=32.68 Aligned_cols=27 Identities=15% Similarity=0.385 Sum_probs=21.7
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.++ .|||.|+.
T Consensus 24 ~eLs~~~Gd~i~v~~~~~~---~~Ww~g~~ 50 (74)
T 1gbq_A 24 DELSFKRGDILKVLNEECD---QNWYKAEL 50 (74)
T ss_dssp TBCCBCTTCEEECCBCSSC---SSEEEEEE
T ss_pred CeeeEcCCCEEEEeEecCC---CCEEEEEE
Confidence 4678999999999986633 47999984
No 213
>3i5r_A Phosphatidylinositol 3-kinase regulatory subunit alpha; SH3 domain, peptide complex, alternative splicing, disease mutation, HOST-virus interaction, phosphoprotein, polymorphism; 1.70A {Homo sapiens} SCOP: b.34.2.1 PDB: 3i5s_A 1pht_A 1pnj_A 2pni_A 1pks_A 1pkt_A
Probab=86.81 E-value=0.38 Score=33.16 Aligned_cols=30 Identities=13% Similarity=0.139 Sum_probs=22.2
Q ss_pred CCCCccCCCeEEEEeec---------CCCCcc--ceeeEEE
Q psy985 36 INSGFVENQEVEVFSKA---------TEGESC--GWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sra---------n~~ep~--gWW~a~V 65 (191)
....|..||.|+|..+. +++.+. |||.|+.
T Consensus 20 ~eLs~~~Gd~I~V~~~~~~~~~~~~~~e~~~~~~gW~~g~~ 60 (83)
T 3i5r_A 20 EDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYN 60 (83)
T ss_dssp TBCCBCTTCEEEEEHHHHHHHTCTTTGGGCHHHHCEEEEEE
T ss_pred CccccCCCCEEEEeeccccccccccccccCCCCCccEEEEe
Confidence 46889999999999652 233334 9999964
No 214
>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.40 E-value=0.49 Score=32.39 Aligned_cols=25 Identities=16% Similarity=0.144 Sum_probs=21.1
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|+.+ ..|||.|+.
T Consensus 32 ~eLs~~~Gd~i~v~~~-----~~gW~~g~~ 56 (79)
T 1x6b_A 32 DEVTLQQADVVLVLQQ-----EDGWLYGER 56 (79)
T ss_dssp SBCCCCTTEEEEEEEE-----ETTEEEEEE
T ss_pred CCcCCCCCCEEEEEEe-----CCCEEEEEE
Confidence 4577899999999997 358999986
No 215
>3pfs_A Bromodomain and PHD finger-containing protein 3; structural genomics, structural genomics consortium, SGC, PW domain, protein binding; 1.90A {Homo sapiens} PDB: 3lyi_A*
Probab=86.35 E-value=1.4 Score=35.40 Aligned_cols=57 Identities=7% Similarity=0.147 Sum_probs=44.6
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEEEE--E------------------------------eccEEEEEEeccCCcc
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIVKM--I------------------------------KGDFHVVEYLGCQSTF 84 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V~~--i------------------------------KGdf~vVey~~~d~~~ 84 (191)
...|..||-|.+-.+ -.=||+|.|.- + +...|.|.|.|-+.+|
T Consensus 34 ~~~~~pgdlVWAK~~-----GyPwwPa~Iidp~~p~~g~~~~~v~ip~pP~~Vlk~~~~~~~~~~~~~ylV~FFd~~~t~ 108 (158)
T 3pfs_A 34 RGDLEPLELVWAKCR-----GYPSYPALIIDPKMPREGLLHNGVPIPVPPLDVLKLGEQKQAEAGEKLFLVLFFDNKRTW 108 (158)
T ss_dssp CSCCCTTCEEEEECT-----TSCEEEEEEECTTSCTTCEEETTEEECCCCHHHHHHHHHHHHHHTSCEEEEEECSTTCCE
T ss_pred CCCCCCCCEEEEecC-----CCCCCCEEEcCCCCccccccccccccCCChHHHHhhcccccccCCCCEEEEEEcCCCCce
Confidence 478999999999883 45599999975 2 2348999999876677
Q ss_pred eeeecCCCcccCCCC
Q psy985 85 TEIVPPERMRQKNTN 99 (191)
Q Consensus 85 teIV~~erLR~~n~n 99 (191)
-.|..++|+|...+
T Consensus 109 -aWV~~~~L~Pl~~d 122 (158)
T 3pfs_A 109 -QWLPRDKVLPLGVE 122 (158)
T ss_dssp -EEEEGGGEEECSSC
T ss_pred -EeeccccEeecCCc
Confidence 78888999987643
No 216
>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.25 E-value=0.39 Score=33.91 Aligned_cols=29 Identities=14% Similarity=0.070 Sum_probs=22.1
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVI 64 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~ 64 (191)
....|.+||.|+|..+.....-.|||.|+
T Consensus 31 ~eLs~~~Gd~i~v~~~~~~~~~~gWw~g~ 59 (94)
T 2e5k_A 31 DELELVPGDFIFMSPMEQTSTSEGWIYGT 59 (94)
T ss_dssp SBCCBCTTCEEEECGGGCCSTTTTEEEEE
T ss_pred CCcCCCCCCEEEEEECcCCCCCCCcEEEE
Confidence 46789999999999875322236899998
No 217
>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A
Probab=86.14 E-value=0.64 Score=36.98 Aligned_cols=26 Identities=23% Similarity=0.506 Sum_probs=21.4
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.+ .|||.|+.
T Consensus 173 ~eL~~~~Gd~i~v~~~~~----~~W~~g~~ 198 (217)
T 1gri_A 173 GELGFRRGDFIHVMDNSD----PNWWKGAC 198 (217)
T ss_dssp TBCCCCTTCEEEEEECCS----SSEEEEEC
T ss_pred CcCCCCCCCEEEEEEeCC----CCeEEEEE
Confidence 356788999999999854 48999987
No 218
>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus}
Probab=85.97 E-value=1 Score=32.24 Aligned_cols=26 Identities=12% Similarity=0.505 Sum_probs=21.4
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.+ .|||.|+.
T Consensus 42 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~~ 67 (109)
T 2yt6_A 42 EDLSFKKGERFQIINNTE----GDWWEARS 67 (109)
T ss_dssp TSCCCCTTCEEEEEECSC----TTCEEEEE
T ss_pred CccCCCCCCEEEEEEccC----CCcEEEEE
Confidence 456789999999998764 58999985
No 219
>1bb9_A Amphiphysin 2; transferase, SH3 domain; 2.20A {Rattus norvegicus} SCOP: b.34.2.1 PDB: 1muz_A 1mv0_B
Probab=85.66 E-value=0.85 Score=33.96 Aligned_cols=31 Identities=13% Similarity=0.131 Sum_probs=22.9
Q ss_pred CCCCccCCCeEEEEeecCC-CCccceeeEEEE
Q psy985 36 INSGFVENQEVEVFSKATE-GESCGWWKVIVK 66 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~-~ep~gWW~a~V~ 66 (191)
....|..||.|+|..+.+. ....|||.|+..
T Consensus 59 dELsf~~GDiI~Vl~~~~~~~~~~gWw~G~~~ 90 (115)
T 1bb9_A 59 DELQLKAGDVVLVIPFQNPEEQDEGWLMGVKE 90 (115)
T ss_dssp TBCCBCTTCEEEEECCSCGGGCCTTEEEEEEH
T ss_pred CccCcCCCCEEEEeeccCCcccCCCeEEEEeC
Confidence 3567899999999995321 334699999764
No 220
>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=85.47 E-value=0.86 Score=31.54 Aligned_cols=26 Identities=19% Similarity=0.455 Sum_probs=20.8
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|+.+.+ .|||.|+.
T Consensus 34 ~eLs~~~Gd~i~v~~~~~----~~Ww~~~~ 59 (85)
T 2yuq_A 34 QELALRRNEEYCLLDSSE----IHWWRVQD 59 (85)
T ss_dssp SBCCCCBTEEEEEEECCS----SSEEEEEC
T ss_pred CcCCCCCCCEEEEEEecC----CCeEEEEE
Confidence 356789999999998764 48999964
No 221
>2m0y_A Dedicator of cytokinesis protein 1; apoptosis; NMR {Mus musculus}
Probab=85.02 E-value=0.82 Score=30.45 Aligned_cols=27 Identities=11% Similarity=0.255 Sum_probs=22.1
Q ss_pred CCCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 35 TINSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 35 ~~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
+....|..||.|.|..+. .|||.|+..
T Consensus 25 ~~eLs~~~Gd~i~v~~~~-----~~W~~g~~~ 51 (74)
T 2m0y_A 25 ADELSLQIGDTVHILETY-----EGWYRGYTL 51 (74)
T ss_dssp SSBCCEETTEEEEEEEBS-----SSCEEEEES
T ss_pred cCcccCCCCCEEEEEEcC-----CCeEEEEEC
Confidence 356889999999999872 479999874
No 222
>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans}
Probab=84.86 E-value=0.98 Score=35.09 Aligned_cols=26 Identities=23% Similarity=0.603 Sum_probs=21.5
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.+ .|||.|+.
T Consensus 133 ~eLsf~~Gd~i~v~~~~~----~~Ww~g~~ 158 (174)
T 3qwx_X 133 TDLPFEQGERLEILSKTN----QDWWEARN 158 (174)
T ss_dssp TBCCBCTTCEEEEEECCS----SSEEEEEC
T ss_pred CccccccCCEEEEEEccC----CCeEEEEE
Confidence 456789999999998763 49999985
No 223
>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=84.79 E-value=0.25 Score=33.03 Aligned_cols=25 Identities=28% Similarity=0.526 Sum_probs=20.7
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+ + .|||.|+.
T Consensus 23 ~eLs~~~Gd~i~v~~~-~----~~Ww~g~~ 47 (69)
T 1uhf_A 23 GDLTFTEGEEILVTQK-D----GEWWTGSI 47 (69)
T ss_dssp SBCCBCTTCEEEECEE-E----TTEEEECS
T ss_pred CccCCCCCCEEEEEEe-C----CCEEEEEe
Confidence 4678999999999887 2 58999973
No 224
>1khc_A DNA cytosine-5 methyltransferase 3B2; five beta-sheets barrel followed by five-helix bundle; HET: DNA; 1.80A {Mus musculus} SCOP: b.34.9.2 PDB: 3flg_A* 3qkj_A*
Probab=84.75 E-value=1.3 Score=34.74 Aligned_cols=54 Identities=19% Similarity=0.306 Sum_probs=40.3
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEEEEec--------cEEEEEEeccCCcceeeecCCCcccC
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVKMIKG--------DFHVVEYLGCQSTFTEIVPPERMRQK 96 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKG--------df~vVey~~~d~~~teIV~~erLR~~ 96 (191)
....+..||-|-+-.+ -..||+|+|..... ..|.|.|.|.. +| -.|..++|.|-
T Consensus 8 ~~~~~~~GDlVWaKvk-----GyPwWPa~V~~~~~~~~~~~~~~~~~V~FFG~~-~~-awv~~~~L~p~ 69 (147)
T 1khc_A 8 DDKEFGIGDLVWGKIK-----GFSWWPAMVVSWKATSKRQAMPGMRWVQWFGDG-KF-SEISADKLVAL 69 (147)
T ss_dssp SSSSCCTTCEEEEEET-----TTEEEEEEEECGGGTTSCCCCTTEEEEEETTTC-CE-EEEEGGGCEET
T ss_pred CCccCcCCCEEEEecC-----CcCCCCEEeccchhhhcccCCCCeEEEEEecCC-CE-EEEcHHHCccc
Confidence 3568999999999885 45899999985322 46889998754 34 66777888875
No 225
>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=84.59 E-value=0.95 Score=30.94 Aligned_cols=28 Identities=14% Similarity=0.241 Sum_probs=21.2
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.. .-.|||.|+.
T Consensus 32 ~eLs~~~Gd~i~v~~~~~--~~~~Ww~g~~ 59 (81)
T 1x43_A 32 TELSLLADEVITVFSVVG--MDSDWLMGER 59 (81)
T ss_dssp TBCCCCTTCEEEEECCTT--CCTTEEEEEE
T ss_pred CcCCCCCCCEEEEEEcCC--CCCCcEEEEE
Confidence 356789999999998743 1248999974
No 226
>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=84.52 E-value=0.36 Score=31.89 Aligned_cols=26 Identities=19% Similarity=0.486 Sum_probs=21.3
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.+ .|||.|+.
T Consensus 22 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~~ 47 (68)
T 1wi7_A 22 DELELKVGDIIEVVGEVE----EGWWEGVL 47 (68)
T ss_dssp TBCCBCTTCEECCCEEEE----TTEEEECS
T ss_pred CCccCcCCCEEEEEEcCC----CCeEEEEE
Confidence 467899999999998743 58999973
No 227
>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens}
Probab=84.10 E-value=1.2 Score=30.90 Aligned_cols=25 Identities=20% Similarity=0.533 Sum_probs=20.8
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|.|..+ + .|||.|+.
T Consensus 18 ~eLs~~~Gd~i~v~~~-~----~~Ww~g~~ 42 (90)
T 3reb_B 18 DDLSFQKGDQMVVLEE-S----GEWWKARS 42 (90)
T ss_dssp TBCCBCTTCEEEEEEC-S----SSEEEEEE
T ss_pred CcCCCCCCCEEEEEEe-C----CCEEEEEE
Confidence 4688999999999986 2 37999986
No 228
>2gtj_A FYN-binding protein; SH3, redox, signaling protein; NMR {Homo sapiens} PDB: 2gto_A
Probab=84.06 E-value=0.67 Score=34.49 Aligned_cols=28 Identities=14% Similarity=0.289 Sum_probs=23.1
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
.+.-|..|+.+||-...+ .|.|||+|+=
T Consensus 42 ~dLp~~~GE~LeII~~~e--~p~g~Wl~RN 69 (96)
T 2gtj_A 42 NELSFKQGEQIEIIRITD--NPEGKWLGRT 69 (96)
T ss_dssp SCCEECTTCCEEEEECTT--CSSSCCEEEC
T ss_pred ccCCcCCCCEEEEEEccC--CCCCeEEEEC
Confidence 577889999999988554 4899999974
No 229
>3h6z_A Polycomb protein SFMBT; MBT, MBR repeat, aromatic CAGE, chromatin regulator, DNA-BIN metal-binding, nucleus, repressor, transcription; HET: MLZ SUC; 2.80A {Drosophila melanogaster}
Probab=83.61 E-value=0.74 Score=42.28 Aligned_cols=60 Identities=15% Similarity=0.209 Sum_probs=40.9
Q ss_pred CCccCCCeEEEEeec--------CCCCccceeeEEEEEEeccEEEEEEeccCC-cceee--ecCCCcccCC
Q psy985 38 SGFVENQEVEVFSKA--------TEGESCGWWKVIVKMIKGDFHVVEYLGCQS-TFTEI--VPPERMRQKN 97 (191)
Q Consensus 38 ~~~~egdeVEV~sra--------n~~ep~gWW~a~V~~iKGdf~vVey~~~d~-~~teI--V~~erLR~~n 97 (191)
-.|.+|+.+||-.+. ..+.|-..|.|.|.++-|--....|.|.+. .+.=. +....|+|+.
T Consensus 35 ~~~~~GMklEv~~~~~~~~~~~~~~~~p~~~WvAtV~~~~G~rLlLry~G~~~d~~DFW~~~~S~~ihPvG 105 (447)
T 3h6z_A 35 DNLGVGMKVEVENTDCDSIEVIQPGQTPTSFWVATILEIKGYKALMSYEGFDTDSHDFWVNLCNAEVHSVG 105 (447)
T ss_dssp TTCCTTCEEEEC----------------CCBEEEEEEEEETTEEEEEETTCSSGGGCEEEETTTSSCBCTT
T ss_pred hhcCCCCEEEEecCCcccccccccccCCCcEEEEEEhhhcccEEEEEEccCCCCCCCccccCCCCceecCc
Confidence 579999999996532 235678999999999999999999999863 23222 2334567765
No 230
>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=83.55 E-value=0.9 Score=30.08 Aligned_cols=28 Identities=21% Similarity=0.413 Sum_probs=22.1
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|.|..+.. ...|||.|+.
T Consensus 22 ~eLs~~~Gd~i~v~~~~~--~~~~W~~g~~ 49 (70)
T 2da9_A 22 DELTIKEGDIVTLINKDC--IDVGWWEGEL 49 (70)
T ss_dssp TBCCCCTTEEEEEEECCC--SSTTEEEEEC
T ss_pred CEeeEcCCCEEEEEECCC--CCCCeEEEEE
Confidence 467899999999998742 2358999984
No 231
>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A
Probab=83.48 E-value=0.51 Score=31.06 Aligned_cols=25 Identities=12% Similarity=0.417 Sum_probs=20.8
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVI 64 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~ 64 (191)
....|..||.|+|..+.+ .|||.|+
T Consensus 23 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~ 47 (67)
T 1aww_A 23 NDLQLRKGDEYFILEESN----LPWWRAR 47 (67)
T ss_dssp SSCCCCSSCEEECCCCCS----SSEECCB
T ss_pred CCccCCCCCEEEEEEccC----CCcEEEE
Confidence 467899999999998744 4799997
No 232
>2kym_A BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI, STE20P PRR, CDC42P-interacting, S signaling protein; NMR {Lodderomyces elongisporus}
Probab=82.81 E-value=1.6 Score=32.55 Aligned_cols=31 Identities=6% Similarity=0.098 Sum_probs=24.0
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEEEEec
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVKMIKG 70 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKG 70 (191)
....|..||.|+|..+.+ .|||.|+.....|
T Consensus 18 ~ELsf~~Gd~i~vl~~~~----~~Ww~g~~~~~~g 48 (120)
T 2kym_A 18 DELDVSPGENLSICAHYD----YEWFIAKPINRLG 48 (120)
T ss_dssp TCCCBCTTCEEEEEEEET----TTEEEEEESSSCS
T ss_pred CccCCCCCCEEEEEEecC----CCEEEEEECCCCC
Confidence 468899999999999843 4899998643343
No 233
>3llr_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase, methylysine binding, STR genomics consortium, SGC, alternative promoter usage; HET: DNA BTB; 2.30A {Homo sapiens} SCOP: b.34.9.0
Probab=82.67 E-value=1.1 Score=35.57 Aligned_cols=55 Identities=16% Similarity=0.180 Sum_probs=41.6
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEEEEEe--------ccEEEEEEeccCCcceeeecCCCcccCCC
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIVKMIK--------GDFHVVEYLGCQSTFTEIVPPERMRQKNT 98 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V~~iK--------Gdf~vVey~~~d~~~teIV~~erLR~~n~ 98 (191)
...|..||-|-+-.+. ..||+|+|.... ...|-|.|-|... .-.|..++|.|-..
T Consensus 14 g~~f~~GDLVWaKvkG-----~PwWPa~V~~~~~~~k~~~~~~~~~V~FFG~~~--~awv~~~~L~pf~e 76 (154)
T 3llr_A 14 GRGFGIGELVWGKLRG-----FSWWPGRIVSWWMTGRSRAAEGTRWVMWFGDGK--FSVVCVEKLMPLSS 76 (154)
T ss_dssp SCCCCTTCEEEECCTT-----SCCEEEEEECGGGTTSCCCCTTEEEEEETTTCC--EEEEEGGGEEEGGG
T ss_pred CCCCccCCEEEEecCC-----CCCCCEEEecccccccccCCCCEEEEEEeCCCC--EEEEcHHHCcchhh
Confidence 4689999999987744 579999998753 3478899987752 46778888877643
No 234
>1ri9_A FYN-binding protein; SH3-like, helically extended, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=81.80 E-value=1.6 Score=32.77 Aligned_cols=26 Identities=8% Similarity=-0.043 Sum_probs=21.8
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
.+.-|..|+.+||-...++ +||+|+=
T Consensus 56 ~DLpfkkGE~LeVI~~~e~----~wwLcRN 81 (102)
T 1ri9_A 56 RDLQVKPGESLEVIQTTDD----TKVLCRN 81 (102)
T ss_dssp TBCCCCTTCBCEEEEESSS----SEEEEEE
T ss_pred ccCCcCCCCEEEEEEeCCC----CEEEEEC
Confidence 6788999999999877663 9999964
No 235
>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A
Probab=81.52 E-value=1.1 Score=38.24 Aligned_cols=26 Identities=15% Similarity=0.173 Sum_probs=21.1
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
...|.+||.|.|+.+.+ -|||.|++.
T Consensus 255 eL~~~~Gd~i~v~~~~~----~gWw~g~~~ 280 (304)
T 2eyz_A 255 ALALEVGELVKVTKINV----SGQWEGECN 280 (304)
T ss_dssp CCCBCTTSCCEEEEECT----TSCEEEEET
T ss_pred eecccCCCEEEEEEecC----CCeEEEEEC
Confidence 45688999999998755 489999864
No 236
>3qby_A Hepatoma-derived growth factor-related protein 2; HDGF2, structural genomics consortium, SGC, protein binding; HET: M3L; 1.95A {Homo sapiens} SCOP: b.34.9.2 PDB: 3qj6_A* 3eae_A 1n27_A
Probab=81.41 E-value=1.4 Score=31.94 Aligned_cols=52 Identities=15% Similarity=0.202 Sum_probs=36.9
Q ss_pred CCccCCCeEEEEeecCCCCccceeeEEEEEEe-------ccEEEEEEeccCCcceeeecCCCcccC
Q psy985 38 SGFVENQEVEVFSKATEGESCGWWKVIVKMIK-------GDFHVVEYLGCQSTFTEIVPPERMRQK 96 (191)
Q Consensus 38 ~~~~egdeVEV~sran~~ep~gWW~a~V~~iK-------Gdf~vVey~~~d~~~teIV~~erLR~~ 96 (191)
.+|..||-|-+-.+ -+.||+|+|..+. ..-|.|.|.|... .-.|..++|.|-
T Consensus 4 ~~f~~GdlVwaK~~-----g~p~WPa~V~~~~~~~~k~~~~~~~V~FFGt~~--~awv~~~~l~pf 62 (94)
T 3qby_A 4 HAFKPGDLVFAKMK-----GYPHWPARIDDIADGAVKPPPNKYPIFFFGTHE--TAFLGPKDLFPY 62 (94)
T ss_dssp CCCCTTCEEEECCT-----TSCCEEEEECCCCTTSBCCCTTCEEEEETTTCC--EEEECGGGEEEH
T ss_pred CcCccCCEEEEecC-----CCCCCCEEEeecccccccCCCCEEEEEEEcCCC--cceEchhHeeEH
Confidence 57899999988774 3569999998763 2357888887532 356666666654
No 237
>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=81.30 E-value=0.55 Score=33.41 Aligned_cols=26 Identities=23% Similarity=0.510 Sum_probs=20.8
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|+.+.+ .|||.|+.
T Consensus 49 ~eLs~~~Gd~i~v~~~~~----~~Ww~g~~ 74 (98)
T 1udl_A 49 DELSFSKGQLINVMNKDD----PDWWQGEI 74 (98)
T ss_dssp TSCCCCTTCEEEECBCCS----SSEEBCBS
T ss_pred CccCCcCCCEEEEEEecC----CCEEEEEE
Confidence 356789999999998744 48999973
No 238
>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A
Probab=81.06 E-value=0.25 Score=33.62 Aligned_cols=26 Identities=15% Similarity=0.395 Sum_probs=20.6
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|+.+.+ .|||.|+.
T Consensus 35 ~eLs~~~Gd~i~v~~~~~----~~Ww~~~~ 60 (77)
T 1awj_A 35 QELALRCDEEYYLLDSSE----IHWWRVQD 60 (77)
T ss_dssp TSCCBCSSSCCSCCCTTS----SSBCCCCC
T ss_pred CCcCCCCCCEEEEEEecC----CCCEEEEE
Confidence 456789999999997653 48999975
No 239
>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B
Probab=80.98 E-value=1.3 Score=35.19 Aligned_cols=25 Identities=28% Similarity=0.578 Sum_probs=21.4
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVI 64 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~ 64 (191)
....|..||.|+|+.+.+ .|||.|+
T Consensus 26 ~eLs~~~Gd~i~vl~~~~----~gWw~g~ 50 (193)
T 1ng2_A 26 SEMALSTGDVVEVVEKSE----SGWWFCQ 50 (193)
T ss_dssp TCCCBCTTCEEEEEECCT----TSCCEEE
T ss_pred CcCCCCCCCEEEEEEecC----CCeEEEE
Confidence 567899999999999743 6899998
No 240
>1u3o_A Huntingtin-associated protein-interacting protein; SH3, CIS-proline,, signaling protein; NMR {Rattus norvegicus}
Probab=80.65 E-value=1.6 Score=31.53 Aligned_cols=30 Identities=23% Similarity=0.383 Sum_probs=23.4
Q ss_pred CCCCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 34 ETINSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 34 ~~~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
.+....|..||.|||.-+.. +-.+||+++.
T Consensus 30 ~~~ELS~~kGd~vevle~~~--~~peW~lvr~ 59 (82)
T 1u3o_A 30 HSSELSIQVGQTVELLERPS--ERPGWCLVRT 59 (82)
T ss_dssp STTCCCBCTTCEEEESSCTT--SSTTEEEEEE
T ss_pred CCCeeeEcCCCEEEEEecCC--CCCCEEEEEE
Confidence 34678899999999997543 3678999975
No 241
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=79.92 E-value=0.89 Score=35.81 Aligned_cols=32 Identities=13% Similarity=0.266 Sum_probs=24.5
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVKMI 68 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~~i 68 (191)
...-+..|+.|+|+.+.++. +.|||.+.+.--
T Consensus 185 ~eLa~~~G~~i~vl~~~~~~-~~~Ww~~~~~~~ 216 (239)
T 1ycs_B 185 DELPMKEGDCMTIIHREDED-EIEWWWARLNDK 216 (239)
T ss_dssp TBCCBCSSCEEEECCCCTTS-CSSEEEEEETTE
T ss_pred CcccccCCCEEEEEEecCCC-CCCEEEEEECCc
Confidence 35678899999999887664 558999986433
No 242
>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A*
Probab=79.74 E-value=2.1 Score=33.13 Aligned_cols=25 Identities=20% Similarity=0.634 Sum_probs=21.0
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
.+..|..||.|+|..+ + .+||.|+.
T Consensus 27 ~eLs~~~Gd~i~v~~~--~---~~Ww~~~~ 51 (175)
T 4d8k_A 27 GDLGFEKGEQLRILEQ--S---GEWWKAQS 51 (175)
T ss_dssp SBCCBCTTCEEEEEEC--C---SSEEEEEE
T ss_pred cccccccCCEEEEEcc--C---CCEEEEEE
Confidence 4678899999999987 2 48999986
No 243
>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=79.32 E-value=0.61 Score=31.31 Aligned_cols=27 Identities=11% Similarity=0.251 Sum_probs=21.1
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.+ ..|||.|++
T Consensus 25 ~eLsf~~Gd~i~v~~~~~---~~~Ww~g~~ 51 (72)
T 1ugv_A 25 SELSFTAGTVFDNVHPSQ---EPGWLEGTL 51 (72)
T ss_dssp SBCCBCTTCEEBSCCBCS---STTEEEEES
T ss_pred CEeCCcCCCEEEEEEecC---CCCeEEEEE
Confidence 467899999999987533 358999974
No 244
>1mv3_A MYC box dependent interacting protein 1; tumor suppressor, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=78.89 E-value=1.9 Score=35.88 Aligned_cols=31 Identities=16% Similarity=0.175 Sum_probs=22.5
Q ss_pred CCCCccCCCeEEEEeecC-CCCccceeeEEEE
Q psy985 36 INSGFVENQEVEVFSKAT-EGESCGWWKVIVK 66 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran-~~ep~gWW~a~V~ 66 (191)
....|..||.|.|+.+.+ +..--|||.|+..
T Consensus 157 dELSf~~GDiI~Vl~~~~~~~~ddgWw~G~~~ 188 (213)
T 1mv3_A 157 DELQLKAGDVVLVIPFQNPEEQDEGWLMGVKE 188 (213)
T ss_dssp TCCCBCSSCEEEECCCSCGGGSCTTEEEEEEH
T ss_pred CcCCcCCCCEEEEeecCCCCccCCCeeEEEeC
Confidence 356789999999998432 1233699999864
No 245
>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=78.88 E-value=2.8 Score=28.58 Aligned_cols=25 Identities=32% Similarity=0.672 Sum_probs=20.1
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|+.. + .+||.|+.
T Consensus 32 ~eLs~~~Gd~i~v~~~-~----~~Ww~~~~ 56 (79)
T 2cud_A 32 SPPIFRRGEKLRVISD-E----GGWWKAIS 56 (79)
T ss_dssp SCCSSCTTCEEEEEEE-E----TTEEEEEE
T ss_pred CcCCCCCCCEEEEEec-C----CCeEEEEE
Confidence 4678899999999973 2 48999975
No 246
>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae}
Probab=78.10 E-value=1.7 Score=28.71 Aligned_cols=25 Identities=24% Similarity=0.473 Sum_probs=19.9
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+ -.|||.|+.
T Consensus 22 ~eLsf~~Gd~i~v~~~-----~~~Ww~g~~ 46 (70)
T 2vkn_A 22 YEISFEQNEILQVSDI-----EGRWWKARR 46 (70)
T ss_dssp TBCCBCTTCEEEEECT-----TSSEEEEEC
T ss_pred CcccCCCCCEEEEEEc-----CCCeEEEEE
Confidence 3678999999999864 258999963
No 247
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=77.83 E-value=1.8 Score=38.44 Aligned_cols=27 Identities=26% Similarity=0.499 Sum_probs=22.0
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
....|..||.|+|..+.+ .|||.|+..
T Consensus 45 ~eL~~~~gd~i~v~~~~~----~~Ww~g~~~ 71 (466)
T 2pz1_A 45 QELGFKAGDVIEVMDATN----REWWWGRVA 71 (466)
T ss_dssp TBCCBCTTCEEEEEECCS----SSEEEEEET
T ss_pred CcCCCCCCCEEEEEEecC----CCEEEEEEC
Confidence 456789999999998763 589999853
No 248
>2rqv_A BUD emergence protein 1; BEM1P, SH3, CDC42P, cytoplasm, cytoskeleton, SH3 domain, SIG protein; NMR {Saccharomyces cerevisiae} PDB: 2rqw_A
Probab=77.59 E-value=0.79 Score=33.98 Aligned_cols=27 Identities=7% Similarity=0.172 Sum_probs=22.1
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
....|..||.|.|..+.+ .|||.|+..
T Consensus 20 ~ELsf~~Gd~i~vl~~~~----~~Ww~g~~~ 46 (108)
T 2rqv_A 20 DELTTYVGENLFICAHHN----CEWFIAKPI 46 (108)
T ss_dssp SBCCCCSSEEECCCCEET----TTEEEECCS
T ss_pred CcCCcCCCCEEEEeEecC----CCEEEEEEC
Confidence 467899999999998754 489999863
No 249
>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens}
Probab=76.69 E-value=1.9 Score=37.32 Aligned_cols=26 Identities=15% Similarity=0.332 Sum_probs=21.5
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|+.+.+ .|||.|+.
T Consensus 189 ~eLsf~~Gd~i~v~~~~~----~~Ww~g~~ 214 (341)
T 2dyb_A 189 LELNFKAGDVIFLLSRIN----KDWLEGTV 214 (341)
T ss_dssp SBCCBCTTCEEEEEEECS----SSEEEEEE
T ss_pred CcCCccCCCEEEEEEecC----CCEEEEEE
Confidence 356789999999999854 68999984
No 250
>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B
Probab=76.29 E-value=2.3 Score=33.76 Aligned_cols=25 Identities=32% Similarity=0.678 Sum_probs=20.7
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
...|..||.|+|+.+.+ -|||.|+.
T Consensus 97 eLs~~~Gd~i~vl~~~~----~gWw~g~~ 121 (193)
T 1ng2_A 97 EVSLLEGEAVEVIHKLL----DGWWVIRK 121 (193)
T ss_dssp BCCBCTTCEEEEEECCT----TSEEEEEE
T ss_pred cccccCCCEEEEEEecC----CCeEEEEE
Confidence 56789999999999763 48999984
No 251
>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}
Probab=71.48 E-value=3.9 Score=34.61 Aligned_cols=26 Identities=23% Similarity=0.656 Sum_probs=21.4
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|+|..+.++ |||.|+.
T Consensus 162 ~eLsf~~Gd~i~v~~~~~~----~Ww~g~~ 187 (308)
T 3qwy_A 162 TDLPFEQGERLEILSKTNQ----DWWEARN 187 (308)
T ss_dssp TBCCBCTTCEEEEEECCSS----SEEEEEC
T ss_pred CcCcCCCCCEEEEEEcCCC----CeEEEEe
Confidence 4567899999999987643 8999985
No 252
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=71.33 E-value=4.2 Score=36.13 Aligned_cols=28 Identities=14% Similarity=0.350 Sum_probs=22.2
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
.+..|..||.|+|..+.++. +||.|+..
T Consensus 58 ~els~~~gd~~~v~~~~~~~---~w~~~~~~ 85 (495)
T 1opk_A 58 NTLSITKGEKLRVLGYNHNG---EWCEAQTK 85 (495)
T ss_dssp TBCCBCTTCEEEEEEECTTS---SEEEEECS
T ss_pred CCCCccCCCEEEEeecCCCC---Cceeeeec
Confidence 45668999999999987543 89999853
No 253
>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A
Probab=70.41 E-value=1.8 Score=35.32 Aligned_cols=25 Identities=16% Similarity=0.395 Sum_probs=20.6
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVI 64 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~ 64 (191)
.+..|..||.|+|..+.+ .|||.|+
T Consensus 151 ~eLsf~~Gd~i~v~~~~~----~~Ww~g~ 175 (230)
T 2dvj_A 151 EDLPFKKGDILRIRDKPE----EQWWNAE 175 (230)
T ss_dssp SSCCCCSSCBCCCCBCSC----SSEEEEE
T ss_pred CCccCcCCCEEEEEEccC----CCcEEEE
Confidence 456789999999998754 5899997
No 254
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=69.46 E-value=4.3 Score=36.50 Aligned_cols=25 Identities=12% Similarity=0.530 Sum_probs=20.9
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
+..|..||.|+|..+.+ .|||.|+.
T Consensus 101 el~~~~gd~i~v~~~~~----~~ww~~~~ 125 (535)
T 2h8h_A 101 DLSFKKGERLQIVNNTE----GDWWLAHS 125 (535)
T ss_dssp BCCBCTTCEEEEEECSS----SSEEEEEE
T ss_pred cCCcCCCCEEEEEEecC----CCceEEEE
Confidence 45688999999999864 58999987
No 255
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=67.48 E-value=29 Score=24.26 Aligned_cols=55 Identities=7% Similarity=0.173 Sum_probs=42.2
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEEEEeccEEEEEEeccCCcceeeecCCCcccCCC
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGCQSTFTEIVPPERMRQKNT 98 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGdf~vVey~~~d~~~teIV~~erLR~~n~ 98 (191)
....+.+||.|-+. =+| -.-++|+|+...-+-++|.|. |++ .-.|..+.||-.+-
T Consensus 12 pa~~~~~geDVL~r--w~D---G~fYLGtIVd~~~~~ClV~Fe--D~S-~~Wv~~kdi~kl~~ 66 (69)
T 2xk0_A 12 PAVTYALQEDVFIK--CND---GRFYLGTIIDQTSDQYLIRFD--DQS-EQWCEPDKLRKLGG 66 (69)
T ss_dssp CCCCCCTTCEEEEE--CTT---SCEEEEEEEEECSSCEEEEET--TCC-EEEECTTTEECSSC
T ss_pred cccccccCCeEEEE--ecC---CCEEEEEEEecCCceEEEEec--CCc-ceeeeHHHHHhhcC
Confidence 44799999988765 455 357899998887788999996 543 46899999987654
No 256
>1kjw_A Postsynaptic density protein 95; protein-protein interaction, scaffold, neuropeptide; 1.80A {Rattus norvegicus} SCOP: b.34.2.1 c.37.1.1 PDB: 1jxm_A* 1jxo_A
Probab=66.66 E-value=5.3 Score=34.00 Aligned_cols=28 Identities=14% Similarity=0.271 Sum_probs=23.1
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVKM 67 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~~ 67 (191)
....|..||.+.|..+.+ .|||.|+...
T Consensus 21 ~eLsf~~GDil~V~~~~d----~~WW~a~~~~ 48 (295)
T 1kjw_A 21 QALSFRFGDVLHVIDAGD----EEWWQARRVH 48 (295)
T ss_dssp SBCCBCTTCEEEEEECCS----SSEEEEEECC
T ss_pred cCCcCCCCCEEEEEEeCC----CCeEEEEECC
Confidence 468899999999998754 5999998763
No 257
>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A
Probab=66.06 E-value=6.5 Score=33.30 Aligned_cols=25 Identities=16% Similarity=0.395 Sum_probs=20.5
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVI 64 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~ 64 (191)
....|..||.|.|..+.+ .|||.|+
T Consensus 149 ~eLsf~~Gd~i~v~~~~~----~~Ww~g~ 173 (304)
T 2eyz_A 149 EDLPFKKGDILRIRDKPE----EQWWNAE 173 (304)
T ss_dssp SSCCCCTTCEEEEEECCS----SSEEEEE
T ss_pred CcCcccCCCEEEEEEecC----CCcEEEE
Confidence 356789999999999754 4899998
No 258
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=65.22 E-value=4.5 Score=35.30 Aligned_cols=27 Identities=11% Similarity=0.483 Sum_probs=22.2
Q ss_pred CCCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 35 TINSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 35 ~~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
+.+..|..||.|+|..+.+ .|||.|+.
T Consensus 16 ~~el~~~~gd~~~v~~~~~----~~ww~~~~ 42 (452)
T 1fmk_A 16 ETDLSFKKGERLQIVNNTE----GDWWLAHS 42 (452)
T ss_dssp SSBCCBCTTCEEEESCCCS----SSEEEEEE
T ss_pred CCCCCccCCCEEEEeccCC----CCceEEEE
Confidence 3468899999999998753 58999986
No 259
>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*
Probab=68.37 E-value=1.4 Score=37.55 Aligned_cols=30 Identities=23% Similarity=0.186 Sum_probs=22.5
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEEEEEec
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIVKMIKG 70 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKG 70 (191)
...|.+||.|+|+.+. .-|||.|++.-..|
T Consensus 255 eLs~~~Gd~i~v~~~~----~~gWw~g~~~g~~G 284 (303)
T 2lqn_A 255 ALALEVGDIVKVTRMN----INGQWEGEVNGRKG 284 (303)
Confidence 4668899999999774 35899998754333
No 260
>3l42_A Peregrin; transcription regulation, histone H3 acetylation, chromatin modification, structural genomics, structural genomics CONS SGC, activator; 1.30A {Homo sapiens} PDB: 3mo8_A* 2x4w_A* 2x35_A* 2x4x_A* 2x4y_A*
Probab=64.05 E-value=9.3 Score=29.64 Aligned_cols=57 Identities=12% Similarity=0.129 Sum_probs=44.0
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEEEEEe--------------------------------ccEEEEEEeccCCcc
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIVKMIK--------------------------------GDFHVVEYLGCQSTF 84 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V~~iK--------------------------------Gdf~vVey~~~d~~~ 84 (191)
...|..||-|.+-. +-.=||+|.|.-=+ ...|.|.|.|-+.+|
T Consensus 3 ~~~~~~~dlVWAK~-----~gyP~wPa~Iidp~~p~~g~~~~g~~ip~pP~~Vl~~~~~~~~~~~~~~y~V~FFd~~~t~ 77 (130)
T 3l42_A 3 DSPLDALDLVWAKC-----RGYPSYPALIIDPKMPREGMFHHGVPIPVPPLEVLKLGEQMTQEAREHLYLVLFFDNKRTW 77 (130)
T ss_dssp CSSSCTTCEEEECC-----TTSCCEEEEEECTTSCTTCEEETTEEECCCCHHHHHHHHHHHHHCSSCEEEEEESSTTCCE
T ss_pred cccCCCCCEEEEec-----ccCCCCCEEEcCCCCccccccccCccCCCChHHHHhhcccccccCCCcEEEEEeCCCCCce
Confidence 35788999888766 34559999997611 348999999876777
Q ss_pred eeeecCCCcccCCCC
Q psy985 85 TEIVPPERMRQKNTN 99 (191)
Q Consensus 85 teIV~~erLR~~n~n 99 (191)
-.|..+.|+|.+.+
T Consensus 78 -aWv~~~~i~pl~~d 91 (130)
T 3l42_A 78 -QWLPRTKLVPLGVN 91 (130)
T ss_dssp -EEEEGGGEEESSSC
T ss_pred -EeecccceeecCCc
Confidence 78999999998765
No 261
>2e5p_A Protein PHF1, PHD finger protein 1; tudor domain, PHF1 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=63.77 E-value=21 Score=24.84 Aligned_cols=51 Identities=14% Similarity=0.157 Sum_probs=34.9
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEEEEEe--ccEEEEEEeccCCcceeeecCCCccc
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIVKMIK--GDFHVVEYLGCQSTFTEIVPPERMRQ 95 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V~~iK--Gdf~vVey~~~d~~~teIV~~erLR~ 95 (191)
-.+|.+||.|-+ |=.| +--++|+|+.+. .+.+.|+|. |++ .-.|-...|.+
T Consensus 7 ~~~f~eGqdVLa--rWsD---GlfYlGtV~kV~~~~~~ClV~Fe--D~s-~~wv~~kdi~~ 59 (68)
T 2e5p_A 7 GPRLWEGQDVLA--RWTD---GLLYLGTIKKVDSAREVCLVQFE--DDS-QFLVLWKDISP 59 (68)
T ss_dssp CCCCCTTCEEEE--ECTT---SSEEEEEEEEEETTTTEEEEEET--TTE-EEEEETTTEEC
T ss_pred CcccccCCEEEE--EecC---CcEEEeEEEEEecCCcEEEEEEc--cCC-eeeeeeecccc
Confidence 468999999855 3344 557899999999 559999996 432 23444444444
No 262
>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A
Probab=63.51 E-value=3.1 Score=32.92 Aligned_cols=28 Identities=14% Similarity=0.372 Sum_probs=18.4
Q ss_pred CCCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 35 TINSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 35 ~~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
+....|..||.|+|..+.++ .|||.|+.
T Consensus 14 ~~eLs~~~Gd~i~v~~~~~~---~~W~~~~~ 41 (217)
T 1gri_A 14 DDELSFKRGDILKVLNEECD---QNWYKAEL 41 (217)
T ss_dssp SSCCCBCTTCEEEC---------CCEEEEES
T ss_pred CCcCCCCCCCEEEEEeccCC---CCeEeecc
Confidence 34678999999999986533 57999974
No 263
>3kfv_A Tight junction protein ZO-3; structural genomics consortium, SGC, cell junction, cell membrane, membrane, SH3 domain; 2.80A {Homo sapiens}
Probab=63.32 E-value=8.7 Score=33.43 Aligned_cols=48 Identities=23% Similarity=0.483 Sum_probs=28.9
Q ss_pred cceeEEEEeecCCCCcccccccCcccccCCCCCCCCCccCCCeEEEEeecCCC-----CccceeeEEEE
Q psy985 3 GHSFNVSNPFSLLRWQPESKFQFSMVRLPPRETINSGFVENQEVEVFSKATEG-----ESCGWWKVIVK 66 (191)
Q Consensus 3 ~~~~~v~V~f~eN~Wqpe~~vPf~~VRlPP~~~~~~~~~egdeVEV~sran~~-----ep~gWW~a~V~ 66 (191)
|-+|-|..-| ++.|. ++....|.-||...|....+++ +-.|||.|+-.
T Consensus 2 gdsfyVRalf---dy~~~-------------~~~eL~F~kGDil~V~dt~~~~~~~~~~~~gwW~A~~~ 54 (308)
T 3kfv_A 2 GDSFYIRTHF---ELEPS-------------PPSGLGFTRGDVFHVLDTLHPGPGQSHARGGHWLAVRM 54 (308)
T ss_dssp -CCEEEEECS---CBCCC-------------SSSBCCBCTTCEEEEEEC-------------CEEEEEE
T ss_pred CccEEEEEec---CcCCC-------------CcccCCCccCCEEEEccccCCCcccccccCceEEEEec
Confidence 4456666667 55542 2357889999999999866543 46789999765
No 264
>3dlm_A Histone-lysine N-methyltransferase setdb1; setdb1_human, structural genomics, structural genomics consortium, SGC, alternative splicing; 1.77A {Homo sapiens}
Probab=62.65 E-value=21 Score=29.92 Aligned_cols=80 Identities=16% Similarity=0.076 Sum_probs=56.6
Q ss_pred eeEEEEeecCCCCcccccccCcccccCCCCC--------------------------CCCCccCCCeEEEEeecCCCCcc
Q psy985 5 SFNVSNPFSLLRWQPESKFQFSMVRLPPRET--------------------------INSGFVENQEVEVFSKATEGESC 58 (191)
Q Consensus 5 ~~~v~V~f~eN~Wqpe~~vPf~~VRlPP~~~--------------------------~~~~~~egdeVEV~sran~~ep~ 58 (191)
.+.-+|.| ++... +-++..+||+.=.+. .-.....||.+.+=. --
T Consensus 101 ~~RyLVFF-DDG~~--~Yv~~~~V~~Vc~~s~~vW~di~~~~~r~FIk~YL~~yP~rpmv~~~~GQ~i~~E~------~g 171 (213)
T 3dlm_A 101 KLRFLIFF-DDGYA--SYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYVTAYPNRPMVLLKSGQLIKTEW------EG 171 (213)
T ss_dssp TSCEEEEE-TTSCE--EEECGGGEEEBSSCCSSGGGGCSCHHHHHHHHHHHHHTTCCCCCCCCTTCEEEEEE------TT
T ss_pred CceEEEEE-eCCCc--ceecCceEEEEEEcccchhhhcCcchhHHHHHHHHHhCCCCceEEcCCCCEEEEEe------cC
Confidence 34567888 65543 367777777643221 224678899999811 23
Q ss_pred ceeeEEEEEEeccEEEEEEeccCCcceeeecCCCccc
Q psy985 59 GWWKVIVKMIKGDFHVVEYLGCQSTFTEIVPPERMRQ 95 (191)
Q Consensus 59 gWW~a~V~~iKGdf~vVey~~~d~~~teIV~~erLR~ 95 (191)
-||.|+|..+.+.|..|.|.+- .-+|++=++..|-
T Consensus 172 ~w~~~~V~~vD~SLv~v~f~~d--kr~EWIYRGS~Rl 206 (213)
T 3dlm_A 172 TWWKSRVEEVDGSLVRILFLDD--KRCEWIYRGSTRL 206 (213)
T ss_dssp EEEEEEEEEEETTEEEEEETTT--TEEEEEETTCTTB
T ss_pred cEEEEEEEEEcceeEEEEEcCC--CeeEEEEcCCccc
Confidence 5999999999999999999844 4689998887764
No 265
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=62.65 E-value=7 Score=34.03 Aligned_cols=24 Identities=21% Similarity=0.579 Sum_probs=20.2
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVI 64 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~ 64 (191)
.+..|..||.++|..+. .|||.|+
T Consensus 23 ~el~~~~gd~~~v~~~~-----~~W~~~~ 46 (454)
T 1qcf_A 23 EDLSFQKGDQMVVLEES-----GEWWKAR 46 (454)
T ss_dssp TBCCBCTTCEEEEEECC-----TTEEEEE
T ss_pred CcCcccCCCEEEEEecC-----CCCeEEE
Confidence 46789999999999872 4799997
No 266
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=60.30 E-value=30 Score=24.73 Aligned_cols=38 Identities=18% Similarity=0.254 Sum_probs=29.5
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEEEEe--ccEEEEEEe
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVKMIK--GDFHVVEYL 78 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~~iK--Gdf~vVey~ 78 (191)
....|.+||.|-+ |=+|+ --++|+|+.+. ++.|.|+|.
T Consensus 23 p~~~f~eGeDVLa--rwsDG---lfYLGTI~kV~~~~e~ClV~F~ 62 (79)
T 2m0o_A 23 PRPRLWEGQDVLA--RWTDG---LLYLGTIKKVDSAREVCLVQFE 62 (79)
T ss_dssp CCCCCCTTCEEEB--CCTTS---CCCEEEEEEEETTTTEEEEEET
T ss_pred CcceeccCCEEEE--EecCC---CEEeEEEEEeccCCCEEEEEEc
Confidence 4578999998755 44553 46899999887 669999996
No 267
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=59.76 E-value=9.7 Score=33.14 Aligned_cols=28 Identities=14% Similarity=0.355 Sum_probs=22.3
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
.+..|..||.++|..+.++ .|||.|+..
T Consensus 26 ~el~~~~gd~i~v~~~~~~---~~ww~~~~~ 53 (450)
T 1k9a_A 26 QDLPFCKGDVLTIVAVTKD---PNWYKAKNK 53 (450)
T ss_dssp SBCCBCTTCEEEEEEECSS---TTEEEEECT
T ss_pred CcCCCCCCCEEEEeeccCC---CCceEEEEC
Confidence 4678999999999998543 369999854
No 268
>2qqr_A JMJC domain-containing histone demethylation protein 3A; histone lysine demethylase, tandem hybrid tudor domains, metal binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2qqs_A* 2gfa_A* 2gf7_A*
Probab=58.41 E-value=27 Score=26.54 Aligned_cols=51 Identities=18% Similarity=0.352 Sum_probs=34.6
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEEEEEecc-EEEEEEeccCCcce------eeecCCCcc
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGD-FHVVEYLGCQSTFT------EIVPPERMR 94 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGd-f~vVey~~~d~~~t------eIV~~erLR 94 (191)
..++..||.|-+-. .++- -.+|+|..++-. ||.|.|. |.+|. +||+.+=+|
T Consensus 3 ~~~v~vGq~V~akh--~ngr---yy~~~V~~~~~~~~y~V~F~--DgS~s~dl~peDIvs~dc~~ 60 (118)
T 2qqr_A 3 MQSITAGQKVISKH--KNGR---FYQCEVVRLTTETFYEVNFD--DGSFSDNLYPEDIVSQDCLQ 60 (118)
T ss_dssp SSCCCTTCEEEEEC--TTSS---EEEEEEEEEEEEEEEEEEET--TSCEEEEECGGGBCSSCHHH
T ss_pred cceeccCCEEEEEC--CCCC---EEeEEEEEEeeEEEEEEEcC--CCCccCCCCHhhcccccccc
Confidence 46789999988543 3222 348888888766 9999998 55554 466665555
No 269
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens}
Probab=58.06 E-value=8.7 Score=35.71 Aligned_cols=27 Identities=11% Similarity=-0.029 Sum_probs=21.6
Q ss_pred CCCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 35 TINSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 35 ~~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
+.+..|.+||.|+|....+ -|||.|+.
T Consensus 456 ~dELs~~~GD~i~v~~~~~----~gW~~G~~ 482 (526)
T 2de0_X 456 ADEIPMEPGDIIGVAGNHW----DGYSKGVN 482 (526)
T ss_dssp TTBCCBCTTCEEEEEEECS----SSEEEEEE
T ss_pred CCcCCcCCCCEEEEccccC----CCeeEEEe
Confidence 3567899999999986543 68999974
No 270
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=56.95 E-value=30 Score=23.97 Aligned_cols=37 Identities=16% Similarity=0.108 Sum_probs=29.6
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEEEEEec--cEEEEEEe
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIVKMIKG--DFHVVEYL 78 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKG--df~vVey~ 78 (191)
...|++||.|-+-- .| |--++|+|+.|.. ..|+|+|.
T Consensus 11 ~~~f~vGddVLA~w--tD---Gl~Y~gtI~~V~~~~gtC~V~F~ 49 (66)
T 2eqj_A 11 ACKFEEGQDVLARW--SD---GLFYLGTIKKINILKQSCFIIFE 49 (66)
T ss_dssp CCCSCTTCEEEEEC--TT---SCEEEEEEEEEETTTTEEEEEET
T ss_pred cccccCCCEEEEEE--cc---CcEEEeEEEEEccCCcEEEEEEc
Confidence 35799999997744 33 4568999999996 49999996
No 271
>3tvt_A Disks large 1 tumor suppressor protein; DLG, SRC-homology-3, guanylate kinase, phosphorylation-depen cell membrane; 1.60A {Drosophila melanogaster} PDB: 3uat_A*
Probab=56.05 E-value=12 Score=32.07 Aligned_cols=47 Identities=23% Similarity=0.462 Sum_probs=28.6
Q ss_pred eeEEEEeecCCCCcccccccCcccccCCCCCCCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 5 SFNVSNPFSLLRWQPESKFQFSMVRLPPRETINSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 5 ~~~v~V~f~eN~Wqpe~~vPf~~VRlPP~~~~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
+|=|+.-| ++.|+ .|--+|.. -..|.-||...|-...++ +||.|+..
T Consensus 5 s~yvRa~f---dY~~~-----~D~~~P~~---gL~F~~gDiL~V~~~~d~----~wWqA~~v 51 (292)
T 3tvt_A 5 SLYVRALF---DYDPN-----RDDGLPSR---GLPFKHGDILHVTNASDD----EWWQARRV 51 (292)
T ss_dssp CCEEEECS---CBCC-----------------CCCBCTTCEEEEEECCSS----SEEEECCC
T ss_pred eEEEEEec---cCCCC-----CCCCCCCC---cCCcCCCCEEEEeecCCC----CeEEEEEe
Confidence 45566667 55554 33334432 378999999999997554 89999754
No 272
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=54.41 E-value=25 Score=29.50 Aligned_cols=59 Identities=15% Similarity=0.089 Sum_probs=42.5
Q ss_pred cccccCcccccCCCCCCCC-CccCCCeEEEEe-ecCCCCccceeeEEEEEEecc------EEEEEEe
Q psy985 20 ESKFQFSMVRLPPRETINS-GFVENQEVEVFS-KATEGESCGWWKVIVKMIKGD------FHVVEYL 78 (191)
Q Consensus 20 e~~vPf~~VRlPP~~~~~~-~~~egdeVEV~s-ran~~ep~gWW~a~V~~iKGd------f~vVey~ 78 (191)
.-+++.++||......... ++.+||.|-|.. ..+..+.--||.|.|...+-. +.-|.+.
T Consensus 55 ~~~~~~~~irprar~~~~~~~l~~g~~vm~nyn~~~~~~~G~~y~~~I~~~~~~r~~~~~~a~i~l~ 121 (226)
T 3ask_A 55 VVQMNSRDVRARARTIIKWQDLEVGQVVMLNYNPDNPKERGFWYDAEISRKRETRTARELYANVVLG 121 (226)
T ss_dssp EEEEEGGGEEECCCCBCCGGGCCTTCEEEEEECTTSTTSCCEEEEEEEEEEEECSSCEEEEEEEECS
T ss_pred ceecccccccccccccCCccccccCcEEEEecccCCccccCceeehhhhhhhhcccccceeeEEEec
Confidence 3477888998776554333 889999999966 445556677999999888754 5555543
No 273
>3mea_A SAGA-associated factor 29 homolog; structural genomics consortium, SGC, nucleus, transcription, transcription regulation, chromosomal protein, DNA-binding; HET: M3L; 1.26A {Homo sapiens} PDB: 3meu_A* 3met_A* 3me9_A* 3mev_A* 3lx7_A 3mew_A
Probab=53.91 E-value=39 Score=27.35 Aligned_cols=81 Identities=14% Similarity=0.105 Sum_probs=49.7
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEEEEecc--EEEEEEeccCC------cceeeecCCCcccCC---CC-----
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGD--FHVVEYLGCQS------TFTEIVPPERMRQKN---TN----- 99 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGd--f~vVey~~~d~------~~teIV~~erLR~~n---~n----- 99 (191)
.+..+..||+|=++.++.+.+ -.|-+|+|....|+ -|-|+=..-|. +...|+++-..++.. +.
T Consensus 41 ~~~~~~~G~~VAakvk~~~~~-~~WILa~Vv~~~~~~~rYeV~D~d~eg~~~~~~s~~~IIPLP~~~a~p~t~~~~~f~~ 119 (180)
T 3mea_A 41 GDYVARPGDKVAARVKAVDGD-EQWILAEVVSYSHATNKYEVDDIDEEGKERHTLSRRRVIPLPQWKANPETDPEALFQK 119 (180)
T ss_dssp TTCCCCTTCEEEEEEECCC---EEEEEEEEEEEETTTTEEEEEECCTTCCEEEEEEGGGEEECCSBBCCTTTCGGGSCCT
T ss_pred CCcccCCCCEEEEEcCCCCCC-ccEEEEEEEEEcCCCCEEEEecCCCCCceeEEeCHHHEEECCCcCCCcccCccccCCC
Confidence 467899999999998865443 67999999998765 56665443222 233455555444311 01
Q ss_pred ------CCCCcCceeEEeecCChh
Q psy985 100 ------PPIDAKTFHKFDIEVPLD 117 (191)
Q Consensus 100 ------~pi~~~~f~k~~i~VPed 117 (191)
-.-.-.+||+-+|.-|..
T Consensus 120 G~~VLAlYP~TT~FY~A~V~~~p~ 143 (180)
T 3mea_A 120 EQLVLALYPQTTCFYRALIHAPPQ 143 (180)
T ss_dssp TCEEEEECTTSSEEEEEEEEECCS
T ss_pred CCEEEEeCCCCceeeEEEEecCCC
Confidence 011246788888776543
No 274
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=52.92 E-value=50 Score=22.31 Aligned_cols=52 Identities=13% Similarity=0.101 Sum_probs=36.9
Q ss_pred CCccCCCeEEEEeecCCCCccceeeEEEEEEecc--EEEEEEeccCCcceeeecCCCcccCC
Q psy985 38 SGFVENQEVEVFSKATEGESCGWWKVIVKMIKGD--FHVVEYLGCQSTFTEIVPPERMRQKN 97 (191)
Q Consensus 38 ~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGd--f~vVey~~~d~~~teIV~~erLR~~n 97 (191)
..|.+||.|-+.- +| +--++|+|+.+... -|.|+|- |.+ .-.|....|++..
T Consensus 2 ~~f~~GedVLarw--sD---G~fYlGtI~~V~~~~~~clV~F~--D~s-~~W~~~kdi~~~~ 55 (58)
T 4hcz_A 2 PRLWEGQDVLARW--TD---GLLYLGTIKKVDSAREVCLVQFE--DDS-QFLVLWKDISPAA 55 (58)
T ss_dssp CSCCTTCEEEEEC--TT---SCEEEEEEEEEETTTTEEEEEET--TSC-EEEEEGGGEEECS
T ss_pred CccccCCEEEEEe--cC---CCEEeEEEEEEecCCCEEEEEEc--CCC-eEEEEhHHccccc
Confidence 4689999876643 55 67899999997655 9999996 432 3566666666543
No 275
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=52.86 E-value=2.9 Score=37.89 Aligned_cols=28 Identities=21% Similarity=0.343 Sum_probs=0.0
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
....|..||.|.|..+.++ .|||.|++.
T Consensus 443 ~eLsf~~Gd~i~vl~~~~~---~~Ww~g~~~ 470 (486)
T 3haj_A 443 DELSFKAGDELTKMEDEDE---QGWCKGRLD 470 (486)
T ss_dssp -------------------------------
T ss_pred CcCccCCCCEEEEEEecCC---CCeeEEEeC
Confidence 3567889999999886543 489999976
No 276
>2cpq_A FragIle X mental retardation syndrome related protein 1, isoform B'; KH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=52.62 E-value=47 Score=23.93 Aligned_cols=59 Identities=14% Similarity=0.126 Sum_probs=42.8
Q ss_pred eEEeecCChhHHHHHHhhhch--HHHHHhhhccEEEEcCCCCeeEEEeCchhhHhhhhhhh
Q psy985 108 HKFDIEVPLDVQEFAKMEGAH--KDFQKAIAAAIVRYIPDKGALSVISRDEACQKRASMIK 166 (191)
Q Consensus 108 ~k~~i~VPedLre~~~~~~~h--~dF~kaiga~~v~y~pe~~~Lvvls~~e~~~kRA~mL~ 166 (191)
+..++.||+|..-..=-.+.- +..++..|+-.+..+.+.|.+.|.+.+++++++|.-+.
T Consensus 15 ~i~~i~I~~dkIg~vIG~gGk~Ik~I~e~tGv~~IdI~eddG~V~I~g~~~ea~~~A~~~I 75 (91)
T 2cpq_A 15 FHEEFVVREDLMGLAIGTHGSNIQQARKVPGVTAIELDEDTGTFRIYGESADAVKKARGFL 75 (91)
T ss_dssp EEEEEECCHHHHHHHHTTTTHHHHHHHTSTTEEEEEEETTTTEEEEEESSHHHHHHHHHHH
T ss_pred eEEEEEEChHHhhhhcCCCcHHHHHHHHHhCCeEEEEEcCCCEEEEEECCHHHHHHHHHHH
Confidence 677889999988776555333 25555556544777777799999998999999886543
No 277
>2e5q_A PHD finger protein 19; tudor domain, isoform B, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.56 E-value=22 Score=24.46 Aligned_cols=37 Identities=22% Similarity=0.184 Sum_probs=29.2
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEEEEEe--ccEEEEEEe
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIVKMIK--GDFHVVEYL 78 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V~~iK--Gdf~vVey~ 78 (191)
...|.+||.|-+.- .| +--++|+|+.+. ++.+.|.|.
T Consensus 5 ~~~f~eGqdVLarW--sD---GlfYlgtV~kV~~~~~~ClV~Fe 43 (63)
T 2e5q_A 5 SSGLTEGQYVLCRW--TD---GLYYLGKIKRVSSSKQSCLVTFE 43 (63)
T ss_dssp CCCCCTTCEEEEEC--TT---SCEEEEEECCCCSTTSEEEEEET
T ss_pred ccceecCCEEEEEe--cC---CCEEEEEEEEEecCCCEEEEEEc
Confidence 56899999986542 33 457899999999 559999996
No 278
>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*
Probab=57.17 E-value=3.1 Score=35.35 Aligned_cols=26 Identities=19% Similarity=0.461 Sum_probs=21.0
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIV 65 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V 65 (191)
....|..||.|.|+.+.++ |||.|+.
T Consensus 140 ~eLsf~~Gd~i~v~~~~~~----~Ww~~~~ 165 (303)
T 2lqn_A 140 EDLPFKKGEILVIIEKPEE----QWWSARN 165 (303)
Confidence 3556889999999997643 8999984
No 279
>2io1_B Small ubiquitin-related modifier 3 precursor; SUMO, SENP, ULP, complex, protein binding, hydrolase; 2.60A {Homo sapiens} SCOP: d.15.1.1
Probab=51.65 E-value=11 Score=26.97 Aligned_cols=43 Identities=16% Similarity=0.252 Sum_probs=27.7
Q ss_pred cccCcccccCCCCC-CCCCccCCCeEEEEeecCCCCccceeeEE
Q psy985 22 KFQFSMVRLPPRET-INSGFVENQEVEVFSKATEGESCGWWKVI 64 (191)
Q Consensus 22 ~vPf~~VRlPP~~~-~~~~~~egdeVEV~sran~~ep~gWW~a~ 64 (191)
++=|.--||.+... .+.++..||.++|+.+...+.+.+-|.|.
T Consensus 49 rf~FdG~~l~~~~Tp~dl~medgD~Idv~~~~~GG~~~~~~~~~ 92 (94)
T 2io1_B 49 RFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGVPESSLAGH 92 (94)
T ss_dssp EEEETTEECCTTCCTTTTTCCTTCEEEEEECCEESCCC------
T ss_pred EEEECCEEcCCCCCHHHcCCCCCCEEEEEEeccCCCccceeeec
Confidence 34455556666544 68899999999999988777777777663
No 280
>4dey_A Voltage-dependent L-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 1.95A {Oryctolagus cuniculus} PDB: 4dex_A 1t3l_A 1t3s_A 1vyv_A 1vyu_A 1vyt_A 1t0h_B 1t0j_B 1t0h_A 1t0j_A
Probab=50.63 E-value=16 Score=32.42 Aligned_cols=28 Identities=18% Similarity=0.334 Sum_probs=23.0
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEEE
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVKM 67 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~~ 67 (191)
....|..||..+|..+.++ +||.|+...
T Consensus 60 ~~LsF~~GDiL~V~~~~d~----~WWqar~~~ 87 (337)
T 4dey_A 60 MAISFEAKDFLHVKEKFNN----DWWIGRLVK 87 (337)
T ss_dssp CBCCBCTTCEEEEEEECSS----SEEEEEESS
T ss_pred ccccccCCCEEEEEecCCC----CeEEEEECC
Confidence 3578999999999998654 699999854
No 281
>2dgr_A Ring finger and KH domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.12 E-value=50 Score=22.90 Aligned_cols=63 Identities=19% Similarity=0.152 Sum_probs=44.6
Q ss_pred eEEeecCChhHHHHHHhh--hchHHHHHhhhccEEEEcCCCCeeEEEeCchhhHhhhhhhhhhhh
Q psy985 108 HKFDIEVPLDVQEFAKME--GAHKDFQKAIAAAIVRYIPDKGALSVISRDEACQKRASMIKDMHF 170 (191)
Q Consensus 108 ~k~~i~VPedLre~~~~~--~~h~dF~kaiga~~v~y~pe~~~Lvvls~~e~~~kRA~mL~dmHf 170 (191)
....|.||.+..-+.=-. ..-++.+...|+-.---..+..+.++++++.+.+.+|.-+.+.++
T Consensus 10 ~~~~i~VP~~~vG~IIGkgG~tIk~Iqe~Tga~I~I~~~~~~~~v~ItG~~e~v~~A~~~I~~~i 74 (83)
T 2dgr_A 10 TTIQVRVPYRVVGLVVGPKGATIKRIQQRTHTYIVTPGRDKEPVFAVTGMPENVDRAREEIEAHI 74 (83)
T ss_dssp EEEEEECCHHHHHHHHTTTTSSHHHHHHHTTCEEECCCSSSCCEEEEEECTTTHHHHHHHHHHHH
T ss_pred eEEEEEeChHHeeeeECCCchHHHHHHHHhCCeEEecCCCCCCeEEEEcCHHHHHHHHHHHHHHH
Confidence 567889999887765332 345678887776332222466788999999999999987777653
No 282
>1x4n_A FAR upstream element binding protein 1; KH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.51.1.1 PDB: 2opu_A
Probab=49.57 E-value=63 Score=22.44 Aligned_cols=67 Identities=12% Similarity=0.113 Sum_probs=45.9
Q ss_pred ceeEEeecCChhHHHHHHhh--hchHHHHHhhhccEEEEcCCC----CeeEEEeCchhhHhhhhhhhhhhhhhH
Q psy985 106 TFHKFDIEVPLDVQEFAKME--GAHKDFQKAIAAAIVRYIPDK----GALSVISRDEACQKRASMIKDMHFRNL 173 (191)
Q Consensus 106 ~f~k~~i~VPedLre~~~~~--~~h~dF~kaiga~~v~y~pe~----~~Lvvls~~e~~~kRA~mL~dmHfr~L 173 (191)
+-...+|.||.+..-..==. ..-++.++..|| .|..+.+. ...+.|+.+...+.+|..+.+..+...
T Consensus 13 ~~~~~~i~Ip~~~vG~IIGkgG~~Ik~I~~~tga-~I~I~~~~~g~~~r~v~I~G~~e~v~~A~~~I~~~i~~~ 85 (92)
T 1x4n_A 13 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGC-KIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKG 85 (92)
T ss_dssp CCEEEEEEEEHHHHHHHHCSSSHHHHHHHHHSCC-EEEECSCCTTCSEEEEEEEECHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEEEChHHcceeECCCchHHHHHHHHhCC-EEEEcCCCCCCCccEEEEEeCHHHHHHHHHHHHHHHHhc
Confidence 44667899999987765433 233466666675 56666653 267888888999999987777666544
No 283
>3krm_A Insulin-like growth factor 2 mRNA-binding protein 1; KH domain, cell projection, cytoplasm, nucleus, phosphoprotein, translation regulation; 2.75A {Homo sapiens}
Probab=48.53 E-value=37 Score=25.50 Aligned_cols=68 Identities=16% Similarity=0.051 Sum_probs=46.9
Q ss_pred EEeecCChhHHHHHHhh--hchHHHHHhhhccEEEEcCCC-----C-eeEEEeCchhhHhhhhhhhhhhhhhHHHHH
Q psy985 109 KFDIEVPLDVQEFAKME--GAHKDFQKAIAAAIVRYIPDK-----G-ALSVISRDEACQKRASMIKDMHFRNLNQKV 177 (191)
Q Consensus 109 k~~i~VPedLre~~~~~--~~h~dF~kaiga~~v~y~pe~-----~-~Lvvls~~e~~~kRA~mL~dmHfr~LrqK~ 177 (191)
..++.||.++.-..--. ..-++.+...|| .+....+. . ..+.|+++...+++|.-+...+++.++++.
T Consensus 86 ~~~i~vp~~~~g~iIGkgG~~I~~i~~~tga-~I~i~~~~~~~~~~~~~v~I~G~~~~v~~A~~~I~~~i~~~~~~~ 161 (163)
T 3krm_A 86 ETHIRVPASAAGRVIGKGGKTVNELQNLTAA-EVVVPRDQTPDENDQVIVKIIGHFYASQMAQRKIRDILAQVKQQH 161 (163)
T ss_dssp EEEEEEETTTHHHHHCGGGHHHHHHHHHHCC-EEECCTTCCCCTTSEEEEEEEECHHHHHHHHHHHHHHHHHHTC--
T ss_pred EEEEEcChhheeeEEcCCChHHHHHHHHhCC-eEEECCCCCCCCCCceEEEEEeCHHHHHHHHHHHHHHHHHHHHhh
Confidence 44789999887765433 233567777776 44444332 1 277788899999999999999999888764
No 284
>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}
Probab=48.23 E-value=3.8 Score=34.74 Aligned_cols=30 Identities=23% Similarity=0.181 Sum_probs=0.0
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEEEEEec
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIVKMIKG 70 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKG 70 (191)
...|.+||.|.|+.+.. -|||.|++.-..|
T Consensus 265 ELs~~~Gd~i~v~~~~~----~~ww~g~~~g~~G 294 (308)
T 3qwy_A 265 QLRVKKGQTVLVTQKMS----NGMYKAELDGQIG 294 (308)
T ss_dssp ----------------------------------
T ss_pred cceeCCCCEEEEEEEcC----CCcEEEEECCeeE
Confidence 45688899999997643 5899888754444
No 285
>2l8d_A Lamin-B receptor; DNA binding protein; NMR {Gallus gallus}
Probab=48.22 E-value=65 Score=22.25 Aligned_cols=53 Identities=13% Similarity=0.133 Sum_probs=39.9
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEEEEEecc--EEEEEEeccCCcceeeecCCCcccC
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGD--FHVVEYLGCQSTFTEIVPPERMRQK 96 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGd--f~vVey~~~d~~~teIV~~erLR~~ 96 (191)
...+.+||.|-..= +.+ .+.++|+|..+-.. .|.|.|.. + -+|=+.-..|||.
T Consensus 7 ~~~~~vgd~VmaRW-~Gd---~~yYparI~Si~s~~~~Y~V~fKd-g--T~e~L~~kDIkp~ 61 (66)
T 2l8d_A 7 NRKYADGEVVMGRW-PGS---VLYYEVQVTSYDDASHLYTVKYKD-G--TELALKESDIRLQ 61 (66)
T ss_dssp SSSSCSSCEEEEEC-TTS---SCEEEEEEEEEETTTTEEEEEETT-S--CEEEEEGGGEECS
T ss_pred ceEeecCCEEEEEc-CCC---ccceEEEEEEeccCCceEEEEecC-C--CEEeechhccccc
Confidence 36789999998866 332 47899999999744 99999986 3 3566666677776
No 286
>1ug1_A KIAA1010 protein; structural genomics, SH3 domain, hypothetical protein BAA76854.1, riken structural genomics/proteomics initiative RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=48.08 E-value=24 Score=25.91 Aligned_cols=28 Identities=21% Similarity=0.312 Sum_probs=21.8
Q ss_pred CCCCCccCCCeEEEEeecCCCCccceee
Q psy985 35 TINSGFVENQEVEVFSKATEGESCGWWK 62 (191)
Q Consensus 35 ~~~~~~~egdeVEV~sran~~ep~gWW~ 62 (191)
..+..+.+||-|-|.++.|...-.+||.
T Consensus 31 ~~dl~l~~GdlVAVl~k~Dp~Gn~srW~ 58 (92)
T 1ug1_A 31 DLDVSLLEGDLVGVIKKKDPMGSQNRWL 58 (92)
T ss_dssp SSCCCCCTTCEEEEEESCCTTSCSSEEE
T ss_pred ceeeeecCCCEEEEEecCCCCCCCcceE
Confidence 3678899999999999998654444554
No 287
>2l1t_A Uncharacterized protein; putative C-DI-GMP binding, GSU3033, PILZ, structural genomic biology, protein structure initiative; NMR {Geobacter sulfurreducens}
Probab=46.01 E-value=22 Score=26.85 Aligned_cols=42 Identities=21% Similarity=0.318 Sum_probs=33.8
Q ss_pred CCCCccCCCeEEEEee-cCCCCccceeeEEEEEEeccEEEEEEec
Q psy985 36 INSGFVENQEVEVFSK-ATEGESCGWWKVIVKMIKGDFHVVEYLG 79 (191)
Q Consensus 36 ~~~~~~egdeVEV~sr-an~~ep~gWW~a~V~~iKGdf~vVey~~ 79 (191)
+..-|++||.|+|=.+ ++..--.+| |.|..+++|...++..+
T Consensus 9 Y~~yF~~gqrv~V~ipL~~~~~F~dw--AiIt~~~~dli~lqLsr 51 (109)
T 2l1t_A 9 YGRYFEQLQKVNLTVRLGDTGSFDGT--AAITSLKGSLAWLELFG 51 (109)
T ss_dssp GGGTCCTTCEEEEEEEETTTEEEEEE--EEEEEEETTEEEECCSS
T ss_pred HHHhcCCCcEEEEEEEcCCCCeEcCc--eEEEEecCCEEEEEeec
Confidence 6678999999999555 555555666 89999999999998764
No 288
>2ftc_K 39S ribosomal protein L19, mitochondrial; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus}
Probab=45.66 E-value=35 Score=25.18 Aligned_cols=41 Identities=15% Similarity=0.034 Sum_probs=26.5
Q ss_pred CCccCCCeEEEEeecCCCCccceeeEEEEEEeccEEEEEEeccCCcc
Q psy985 38 SGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGCQSTF 84 (191)
Q Consensus 38 ~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGdf~vVey~~~d~~~ 84 (191)
++|.+||.|.|..+-.. + +.++..-.|=...+.-.|.+++|
T Consensus 2 P~f~~GDtv~V~~~i~g-~-----k~R~q~F~GvvI~~~~~G~~~tf 42 (98)
T 2ftc_K 2 PEFYVGSILRVTTADPY-A-----SGKISQFLGICIQRSGRGLGATF 42 (98)
T ss_pred CccCCCCEEEEEEEECC-C-----ceEeeeEEEEEEEEECCCCCcEE
Confidence 57999999999887652 2 44555555555555555666555
No 289
>3r87_A Putative uncharacterized protein; unknown function; 1.05A {Photobacterium profundum}
Probab=44.70 E-value=37 Score=23.99 Aligned_cols=18 Identities=11% Similarity=0.117 Sum_probs=14.0
Q ss_pred CCCCccCCCeEEEEeecC
Q psy985 36 INSGFVENQEVEVFSKAT 53 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran 53 (191)
+...+..||+|+|.++..
T Consensus 66 y~~p~~~gd~v~v~t~v~ 83 (135)
T 3r87_A 66 FQDGVEFAEICDIRTSFT 83 (135)
T ss_dssp ECSCCCTTCEEEEEEEEE
T ss_pred ECCcccCCCEEEEEEEEE
Confidence 667778899999988543
No 290
>3v2d_T 50S ribosomal protein L19; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 2hgq_S 2hgj_S 2hgu_S 2j03_T 2jl6_T 2jl8_T 2v47_T 2v49_T 2wdi_T 2wdj_T 2wdl_T 2wdn_T 2wh2_T 2wh4_T 2wrj_T 2wrl_T 2wro_T 2wrr_T 2x9s_T 2x9u_T ...
Probab=44.54 E-value=31 Score=27.26 Aligned_cols=35 Identities=26% Similarity=0.238 Sum_probs=22.4
Q ss_pred CCCccCCCeEEEEeecCCCC--ccceeeEEEEEEecc
Q psy985 37 NSGFVENQEVEVFSKATEGE--SCGWWKVIVKMIKGD 71 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~e--p~gWW~a~V~~iKGd 71 (191)
-++|.+||.|.|.++--++. ---=..|.|..++|.
T Consensus 19 iP~F~~GDtV~V~~~i~EG~keRiQ~FeGvVI~rr~~ 55 (146)
T 3v2d_T 19 LPEFRPGDTVRVSYKVKEGNRTRIQDFEGIVIRIRRN 55 (146)
T ss_dssp CCCCCTTCEEEEEEEEECSSCEEEEEEEEEEEEEECC
T ss_pred CCCcCCCCEEEEEEEEccCCceeeeeEEEEEEEEECC
Confidence 46899999999988865443 223344555555543
No 291
>2do3_A Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.5.5
Probab=44.21 E-value=77 Score=21.92 Aligned_cols=51 Identities=20% Similarity=0.408 Sum_probs=35.6
Q ss_pred cccCCCCCCCCCccCCCeEEEEeecCCCCccceeeEEEEEEeccEEEEEEeccCCcceee
Q psy985 28 VRLPPRETINSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGCQSTFTEI 87 (191)
Q Consensus 28 VRlPP~~~~~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGdf~vVey~~~d~~~teI 87 (191)
+.+|+.. -.+-|.+||-|-|-+-..++| .|-|..+.++..+| +. |.+.+||
T Consensus 7 i~~p~~~-LrK~F~~GDHVkVi~G~~~ge-----tGlVV~v~~d~v~v-~S--D~t~~Ei 57 (69)
T 2do3_A 7 GEFPAQE-LRKYFKMGDHVKVIAGRFEGD-----TGLIVRVEENFVIL-FS--DLTMHEL 57 (69)
T ss_dssp CCCCCCC-CCSSCCTTCEEEESSSTTTTC-----EEEEEEECSSCEEE-EE--SSSCSEE
T ss_pred EEEcHHH-ceeeccCCCeEEEeccEEcCc-----eEEEEEEeCCEEEE-Ee--CCCCCEE
Confidence 4556543 358899999999988655655 47799999995443 32 6666665
No 292
>2ctf_A Vigilin; K homology type I domain, RNA-binding, cell sterol metabolism, beta-alpha-alpha-beta-BETA-alpha structure, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=43.62 E-value=88 Score=22.42 Aligned_cols=71 Identities=7% Similarity=0.056 Sum_probs=52.8
Q ss_pred ceeEEeecCChhHHHHHHhh--hchHHHHHhhhccEEEEcCCCCeeEEEeCchhhHhhhhhhhhhhhhhHHHHH
Q psy985 106 TFHKFDIEVPLDVQEFAKME--GAHKDFQKAIAAAIVRYIPDKGALSVISRDEACQKRASMIKDMHFRNLNQKV 177 (191)
Q Consensus 106 ~f~k~~i~VPedLre~~~~~--~~h~dF~kaiga~~v~y~pe~~~Lvvls~~e~~~kRA~mL~dmHfr~LrqK~ 177 (191)
.|...+|.||..+--+.-=. ..-++++...+++.|.+.. .+..|.|.+....+.+|.-..+.-++.|+.++
T Consensus 25 ~~~t~~i~vp~~~h~~IIG~~G~~Ik~i~~~~~~v~I~fp~-~~~~ItI~G~~~~V~~a~~~I~~~v~el~~~~ 97 (102)
T 2ctf_A 25 SFTVSSVAAPSWLHRFIIGKKGQNLAKITQQMPKVHIEFTE-GEDKITLEGPTEDVSVAQEQIEGMVKDLINRS 97 (102)
T ss_dssp CCEEEEEECCSTTHHHHHTTTTCHHHHHHHHCSSSEEEECS-SSCEEEEEECHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CeEEEEEEeCHHHHhhhcCCCCccHHHHHHHcCCcEEEeCC-CCCEEEEECCHHHHHHHHHHHHHHHHHHHhhc
Confidence 45778899999887775432 3334666655678888766 56688888889999999888777778887664
No 293
>3r8s_P 50S ribosomal protein L19; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_N 1p86_N 2awb_P 2gya_N 2gyc_N 2aw4_P 2i2v_P 2j28_P 2i2t_P* 2qao_P* 2qba_P* 2qbc_P* 2qbe_P 2qbg_P 2qbi_P* 2qbk_P* 2qov_P 2qox_P 2qoz_P* 2qp1_P* ...
Probab=43.10 E-value=33 Score=25.99 Aligned_cols=34 Identities=24% Similarity=0.231 Sum_probs=21.8
Q ss_pred CCCccCCCeEEEEeecCCCC--ccceeeEEEEEEec
Q psy985 37 NSGFVENQEVEVFSKATEGE--SCGWWKVIVKMIKG 70 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~e--p~gWW~a~V~~iKG 70 (191)
-++|.+||.|.|..+-.+++ ---=..|.|...+|
T Consensus 16 iP~f~~GDtv~V~~~i~EG~keRiQ~F~GvvI~~~~ 51 (114)
T 3r8s_P 16 VPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRN 51 (114)
T ss_dssp CCCCCTTCEEEEEEEEEETTEEEEEEEEEEEEEEEC
T ss_pred CCccCCCCEEEEEEEEecCCceeeeeEEEEEEEEEC
Confidence 46899999999988765433 22234455544444
No 294
>1ec6_A RNA-binding protein NOVA-2; KH domain, alpha-beta fold, RNA-binding motif, protein/RNA structure, RNA binding protein/RNA complex; 2.40A {Homo sapiens} SCOP: d.51.1.1
Probab=42.66 E-value=78 Score=21.55 Aligned_cols=67 Identities=12% Similarity=0.101 Sum_probs=46.7
Q ss_pred EEeecCChhHHHHHHhh--hchHHHHHhhhccEEEEcCC-------CCeeEEEeCchhhHhhhhhhhhhhhhhHHHH
Q psy985 109 KFDIEVPLDVQEFAKME--GAHKDFQKAIAAAIVRYIPD-------KGALSVISRDEACQKRASMIKDMHFRNLNQK 176 (191)
Q Consensus 109 k~~i~VPedLre~~~~~--~~h~dF~kaiga~~v~y~pe-------~~~Lvvls~~e~~~kRA~mL~dmHfr~LrqK 176 (191)
..++.||.+..-..=-. ..-++.+...|| .+..+.+ ....+.|+++...+..|.-+....+..-..|
T Consensus 4 t~~i~IP~~~vG~IIGkgG~~Ik~I~~~tga-~I~I~~~~~~~~g~~~r~v~I~G~~~~v~~A~~~I~~~i~~~~~~ 79 (87)
T 1ec6_A 4 LVEIAVPENLVGAILGKGGKTLVEYQELTGA-RIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRVTYEQGV 79 (87)
T ss_dssp EEEEEEEHHHHHHHHCGGGHHHHHHHHHHCC-EEEECCTTCBSTTSCEEEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEChHHcCeeECCCcHhHHHHHHHhCC-EEEEccCCCCCCCCCceEEEEEcCHHHHHHHHHHHHHHHhccccc
Confidence 35688898887665333 233477777776 4555543 2378889999999999998888877766555
No 295
>1j5k_A Heterogeneous nuclear ribonucleoprotein K; single-stranded DNA binding protein, transcription factor, hnRNP K, CT element, C-MYC oncogene; NMR {Homo sapiens} SCOP: d.51.1.1 PDB: 1khm_A
Probab=39.41 E-value=91 Score=21.39 Aligned_cols=65 Identities=9% Similarity=0.103 Sum_probs=43.9
Q ss_pred eeEEeecCChhHHHHHHhh--hchHHHHHhhhccEEEEcCC----CCeeEEEeCchhhHhhhhhhhhhhhhh
Q psy985 107 FHKFDIEVPLDVQEFAKME--GAHKDFQKAIAAAIVRYIPD----KGALSVISRDEACQKRASMIKDMHFRN 172 (191)
Q Consensus 107 f~k~~i~VPedLre~~~~~--~~h~dF~kaiga~~v~y~pe----~~~Lvvls~~e~~~kRA~mL~dmHfr~ 172 (191)
-...++.||.+..-..==. ..-++.++..|| .+..+.. ....|.|+.++..+.+|..+....++.
T Consensus 13 ~~~~~i~Ip~~~vg~IIGkgG~~Ik~I~~~tga-~I~I~~~~~~~~~~~v~I~G~~e~v~~A~~~I~~~i~e 83 (89)
T 1j5k_A 13 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGA-SIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQ 83 (89)
T ss_dssp EEEEEEEEEHHHHHHHHCGGGHHHHHHHHHTCC-EEEECSCCSSSSEEEEEEEEEHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEChhhcceeECCCCHhHHHHHHHhCC-eEEecCCCCCCCccEEEEEcCHHHHHHHHHHHHHHHHh
Confidence 4567789999987665332 334467777776 4555542 347888888899999998776665544
No 296
>2io0_B Small ubiquitin-related modifier 2 precursor; SUMO, SENP, ULP, complex, protein binding, hydrolase; 2.30A {Homo sapiens} SCOP: d.15.1.1
Probab=37.42 E-value=29 Score=24.52 Aligned_cols=33 Identities=18% Similarity=0.402 Sum_probs=24.3
Q ss_pred cccCcccccCCCCC-CCCCccCCCeEEEEeecCC
Q psy985 22 KFQFSMVRLPPRET-INSGFVENQEVEVFSKATE 54 (191)
Q Consensus 22 ~vPf~~VRlPP~~~-~~~~~~egdeVEV~sran~ 54 (191)
++=|.--||.|..+ .+.++..||.++|+.....
T Consensus 47 rf~FdG~~l~~~~Tp~dl~medgD~Idv~~~q~g 80 (91)
T 2io0_B 47 RFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTG 80 (91)
T ss_dssp EEEETTEECCTTCCTTTTTCCTTEEEEEEECCCC
T ss_pred EEEECCEEcCCCCCHHHcCCCCCCEEEEEEeccC
Confidence 44456666666644 6889999999999987654
No 297
>1ixd_A Cylindromatosis tumour-suppressor CYLD; structural genomics, riken structural genomics/proteomics initiative, RSGI, antitumor protein; NMR {Homo sapiens} SCOP: b.34.10.1
Probab=37.26 E-value=57 Score=24.04 Aligned_cols=64 Identities=14% Similarity=0.089 Sum_probs=39.5
Q ss_pred CCCCCCCccCCCeEEEEeec----------CCCCccceeeEEEE------EEeccEEEEEEeccCCcceeeecCCCcccC
Q psy985 33 RETINSGFVENQEVEVFSKA----------TEGESCGWWKVIVK------MIKGDFHVVEYLGCQSTFTEIVPPERMRQK 96 (191)
Q Consensus 33 ~~~~~~~~~egdeVEV~sra----------n~~ep~gWW~a~V~------~iKGdf~vVey~~~d~~~teIV~~erLR~~ 96 (191)
++....++.+||.|+|.... .-....|.|.|.-. +-.|.+--++|..|...|--.|..+++++.
T Consensus 11 ~~~~~~~l~VG~RV~V~~~~~~~GtVryvG~v~~~~G~wvGVEldDep~GKnDGsv~G~rYF~C~p~~G~FVr~~~v~~~ 90 (104)
T 1ixd_A 11 PPGNSHGLEVGSLAEVKENPPFYGVIRWIGQPPGLNEVLAGLELEDECAGCTDGTFRGTRYFTCALKKALFVKLKSCRPD 90 (104)
T ss_dssp TTTSSSCCCTTSEEEECSSSCCCEEEEEEECCSSSCCCEEEEEESSCCTTCBSSEETTEECSCCCTTCBEEEEGGGEEEC
T ss_pred CCCCCcccccCCEEEECcCCCcEEEEEEecccCCCCceEEEEEecCCCCCCCCCEECCEEeeecCCCcEEEEcHHHceec
Confidence 34456789999999997421 11122467766544 222335556777777667667777777764
No 298
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=34.89 E-value=54 Score=31.01 Aligned_cols=25 Identities=16% Similarity=0.349 Sum_probs=21.0
Q ss_pred CCccCCCeEEEEeecCCCCccceeeEEEE
Q psy985 38 SGFVENQEVEVFSKATEGESCGWWKVIVK 66 (191)
Q Consensus 38 ~~~~egdeVEV~sran~~ep~gWW~a~V~ 66 (191)
..|+.||.+.|....+ .+||.|+..
T Consensus 449 LsF~~GDil~v~~~~~----~~WW~a~~~ 473 (721)
T 2xkx_A 449 LSFRFGDVLHVIDAGD----EEWWQARRV 473 (721)
T ss_pred ccccCCCEEEEeecCC----CCeEEEEEC
Confidence 6799999999988654 499999876
No 299
>2xdp_A Lysine-specific demethylase 4C; oxidoreductase, histone modification; 1.56A {Homo sapiens}
Probab=34.85 E-value=23 Score=27.11 Aligned_cols=50 Identities=16% Similarity=0.232 Sum_probs=33.5
Q ss_pred CCCccCCCeEEEEeecCCCCccce-eeEEEEEEecc-EEEEEEeccCCccee------eecCCCcc
Q psy985 37 NSGFVENQEVEVFSKATEGESCGW-WKVIVKMIKGD-FHVVEYLGCQSTFTE------IVPPERMR 94 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gW-W~a~V~~iKGd-f~vVey~~~d~~~te------IV~~erLR 94 (191)
..++..||.|-+..+ + || ..|+|..++-. ||.|.|. |.+|.+ ||+.+=+|
T Consensus 4 ~~~v~vGq~V~ak~~--n----gryy~~~V~~~~~~~~y~V~F~--DgS~s~dl~PedIvs~dc~~ 61 (123)
T 2xdp_A 4 EKVISVGQTVITKHR--N----TRYYSCRVMAVTSQTFYEVMFD--DGSFSRDTFPEDIVSRDCLK 61 (123)
T ss_dssp CCCCCTTCCCCCCCC--C----CCCCCCEEEEEEEEEEEEEEET--TSCEEEEECGGGBCSSCHHH
T ss_pred ccccccCCEEEEECC--C----CcEEeEEEEEEeeEEEEEEEcC--CCCccCCCCHhHcccccccc
Confidence 457899999874432 2 33 45677766655 9999998 666664 66666554
No 300
>2hh3_A KH-type splicing regulatory protein; KH-RNA binding domain, RNA binding protein; NMR {Homo sapiens}
Probab=33.50 E-value=1.3e+02 Score=21.66 Aligned_cols=63 Identities=16% Similarity=0.177 Sum_probs=41.6
Q ss_pred EEeecCChhHHHHHHhh--hchHHHHHhhhccEEEEcCCCC----eeEEEeCchhhHhhhhhhhhhhhhh
Q psy985 109 KFDIEVPLDVQEFAKME--GAHKDFQKAIAAAIVRYIPDKG----ALSVISRDEACQKRASMIKDMHFRN 172 (191)
Q Consensus 109 k~~i~VPedLre~~~~~--~~h~dF~kaiga~~v~y~pe~~----~Lvvls~~e~~~kRA~mL~dmHfr~ 172 (191)
..+|.||.+..-..==. ..-++.++..|+ .|..+++.+ +.+.|+.+.+.+++|..+....+..
T Consensus 12 ~~~i~Ip~~~iG~IIGkgG~~Ik~I~~~TGa-kI~I~~~~~~~~er~V~I~G~~e~v~~A~~~I~~ii~~ 80 (106)
T 2hh3_A 12 GIDVPVPRHSVGVVIGRSGEMIKKIQNDAGV-RIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQS 80 (106)
T ss_dssp CEEEEEETTTHHHHHTTTTHHHHHHHHHHTC-EEEECSSCSSSSEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECHHHcCccCCCCcHHHHHHHHHHCc-EEEEecCCCCCceeEEEEEeCHHHHHHHHHHHHHHHhc
Confidence 46788888877654322 334466666665 566665443 4788888899999998776655443
No 301
>2e6z_A Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.45 E-value=91 Score=20.23 Aligned_cols=38 Identities=18% Similarity=0.088 Sum_probs=27.9
Q ss_pred CCCCccCCCeEEEEeecCCCCccceeeEEEEEEeccEEEEEEe
Q psy985 36 INSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYL 78 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGdf~vVey~ 78 (191)
.+..|.+||.|+|.. .|..=..|+|..+.++-..|.-.
T Consensus 4 ~~~~f~~GD~V~V~~-----Gpf~g~~G~V~evd~e~v~V~v~ 41 (59)
T 2e6z_A 4 GSSGFQPGDNVEVCE-----GELINLQGKILSVDGNKITIMPK 41 (59)
T ss_dssp CCSSCCTTSEEEECS-----STTTTCEEEECCCBTTEEEEEEC
T ss_pred ccccCCCCCEEEEee-----cCCCCCEEEEEEEeCCEEEEEEE
Confidence 357899999999987 34444678999998885555443
No 302
>3mp6_A MBP, SGF29, maltose-binding periplasmic protein, linker, SAGA associated factor 29; histone, tudor domain, histone binding protei; HET: MLY MAL; 1.48A {Escherichia coli} PDB: 3mp1_A* 3mp8_A*
Probab=32.18 E-value=90 Score=27.65 Aligned_cols=55 Identities=18% Similarity=0.228 Sum_probs=0.0
Q ss_pred cccCCCCCCCCCccCCCeEEEEeecCCCCccceeeEEEEEEecc-EEEEEEeccC--Ccceee
Q psy985 28 VRLPPRETINSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGD-FHVVEYLGCQ--STFTEI 87 (191)
Q Consensus 28 VRlPP~~~~~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGd-f~vVey~~~d--~~~teI 87 (191)
+.|||+.+ ...|..|+.|-+..+. .-+-++|+|.....+ -|.|.|.|-+ .+..++
T Consensus 447 ~~~p~~~~-~~~~~~~~~v~a~~p~----tt~fy~a~v~~~~~~~~~~~~f~~~~~~~~~~~~ 504 (522)
T 3mp6_A 447 LLIPPGFP-TKNYPPGTKVLARYPE----TTTFYPAIVIGTKRDGTCRLRFDGEEEVDKETEV 504 (522)
T ss_dssp EEECSSCC-CCCCCTTCEEEEECTT----CSEEEEEEEEEECTTSCEEEEETTC----CCEEE
T ss_pred EECCCCCc-ccCCCCCCEEEEECCC----CcceEeEEEecCCCCCeEEEEecCCCCCCccccc
No 303
>2gf6_A Conserved hypothetical protein; putative thioesterase, structural genomics, joint center for structural genomics, JCSG; HET: COA; 1.91A {Sulfolobus solfataricus} SCOP: d.38.1.1
Probab=31.13 E-value=1.3e+02 Score=20.64 Aligned_cols=22 Identities=5% Similarity=-0.043 Sum_probs=16.2
Q ss_pred CCCCccCCCeEEEEeecCCCCc
Q psy985 36 INSGFVENQEVEVFSKATEGES 57 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep 57 (191)
+...+..||+|+|.++......
T Consensus 67 y~~~~~~gd~v~v~~~v~~~~~ 88 (135)
T 2gf6_A 67 YHRPVKLGDKLTVLLNPKILSN 88 (135)
T ss_dssp ECSCCCTTCEEEEEEEEEECSS
T ss_pred ECCCCcCCCEEEEEEEEEEeCC
Confidence 5677788999999887654333
No 304
>1mvf_D MAZE protein, PEMI-like protein 1; plasmid addiction, camel antibody, addiction antidote, immun; 1.65A {Escherichia coli} SCOP: b.129.1.1 PDB: 1ub4_C
Probab=30.64 E-value=7.5 Score=26.76 Aligned_cols=25 Identities=20% Similarity=0.186 Sum_probs=19.3
Q ss_pred ccccCCCCCCCCCccCCCeEEEEee
Q psy985 27 MVRLPPRETINSGFVENQEVEVFSK 51 (191)
Q Consensus 27 ~VRlPP~~~~~~~~~egdeVEV~sr 51 (191)
.||||..--....+.+||+|++...
T Consensus 14 ~v~iPk~~~~~lgl~~gd~v~i~~~ 38 (82)
T 1mvf_D 14 AVRIPATLMQALNLNIDDEVKIDLV 38 (82)
T ss_dssp EEECCHHHHHHTTCCTTCBEEEEEE
T ss_pred EEEECHHHHHHcCCCCCCEEEEEEE
Confidence 5888865445678899999999764
No 305
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=28.35 E-value=51 Score=30.09 Aligned_cols=32 Identities=16% Similarity=0.173 Sum_probs=23.2
Q ss_pred CCCCCccCCCeEEEEeecCCCCccceeeEEEEE
Q psy985 35 TINSGFVENQEVEVFSKATEGESCGWWKVIVKM 67 (191)
Q Consensus 35 ~~~~~~~egdeVEV~sran~~ep~gWW~a~V~~ 67 (191)
+....|..||...|...... .-.+||.|+...
T Consensus 112 ~~~LsF~~GDIL~V~d~~~~-~d~~wW~A~~~~ 143 (468)
T 3shw_A 112 PYGLSFNKGEVFRVVDTLYN-GKLGSWLAIRIG 143 (468)
T ss_dssp TTBCCBCTTCEEEEEESSGG-GCTTEEEEEEEC
T ss_pred CCCceEccCCEEEEeecccC-CCCCeEEEEEcC
Confidence 35678999999999976321 125899998753
No 306
>3zvk_E VAPB2, antitoxin of toxin-antitoxin system VAPB; antitoxin-toxin-DNA complex, protein-DNA complex; HET: DNA MES; 2.50A {Rickettsia felis}
Probab=28.00 E-value=31 Score=24.07 Aligned_cols=21 Identities=38% Similarity=0.507 Sum_probs=14.7
Q ss_pred ccccCCCCCCCCCccCCCeEEEEeec
Q psy985 27 MVRLPPRETINSGFVENQEVEVFSKA 52 (191)
Q Consensus 27 ~VRlPP~~~~~~~~~egdeVEV~sra 52 (191)
-||||.. ..+ +|++|+|....
T Consensus 14 AVRLPk~----~~~-~g~eV~I~~~g 34 (78)
T 3zvk_E 14 AVRLPKE----FRF-SVKEVSVIPLG 34 (78)
T ss_dssp EEEECGG----GCC-SSSEEEEEEET
T ss_pred eEECCHH----HcC-CCCEEEEEEEC
Confidence 4899964 334 68999987643
No 307
>3db3_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, tandem tudor domains, LI metal binding, DNA replication; HET: M3L; 2.40A {Homo sapiens} PDB: 3db4_A 2l3r_A*
Probab=27.82 E-value=1.5e+02 Score=23.73 Aligned_cols=54 Identities=13% Similarity=0.235 Sum_probs=38.8
Q ss_pred ccCCCeEEEEeecCCCCccceeeEEEEEE-e-----------------cc--EEEEEEeccCCcceeeecCCCcccCC
Q psy985 40 FVENQEVEVFSKATEGESCGWWKVIVKMI-K-----------------GD--FHVVEYLGCQSTFTEIVPPERMRQKN 97 (191)
Q Consensus 40 ~~egdeVEV~sran~~ep~gWW~a~V~~i-K-----------------Gd--f~vVey~~~d~~~teIV~~erLR~~n 97 (191)
.+.|+-|++. |...-+|.-|+|+.+ | +| +|-|+|-+.+..-.--++...+||..
T Consensus 11 YKinelVDar----D~~~GAWFEA~Iv~Vtr~~~~~~~p~~s~~~~~~~edviYhVkyddype~gvv~~~~~~iRpRA 84 (161)
T 3db3_A 11 YKVNEYVDAR----DTNMGAWFEAQVVRVTRKAPSRDEPCSSTSRPALEEDVIYHVKYDDYPENGVVQMNSRDVRARA 84 (161)
T ss_dssp SCTTCEEEEE----CTTTCCEEEEEEEEEEEC-----------------CCEEEEEEESSCGGGCEEEEEGGGEECCC
T ss_pred EEecceeeee----ccCCCcceEEEEEEEEecCCCCCCcccccccCCCcCceEEEEEeccCccCCeEecchhccccce
Confidence 4678888875 445678999998883 3 24 99999986654444456778888875
No 308
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=27.44 E-value=48 Score=29.15 Aligned_cols=32 Identities=16% Similarity=0.173 Sum_probs=22.7
Q ss_pred CCCCCccCCCeEEEEeecCCCCccceeeEEEEE
Q psy985 35 TINSGFVENQEVEVFSKATEGESCGWWKVIVKM 67 (191)
Q Consensus 35 ~~~~~~~egdeVEV~sran~~ep~gWW~a~V~~ 67 (191)
+....|.-||...|-..... .-.+||.|+-..
T Consensus 120 ~~~Lsf~~Gdil~V~~~~~~-~d~~wW~a~~~~ 151 (391)
T 3tsz_A 120 PYGLSFNKGEVFRVVDTLYN-GKLGSWLAIRIG 151 (391)
T ss_dssp TTBCCBCTTCEEEEEESSGG-GSSSEEEEEEEC
T ss_pred CCcceEccCCEEEEEeccCC-CCCCeEEEEEeC
Confidence 34677899999999875311 136899998754
No 309
>2dig_A Lamin-B receptor; tudor domain, integral nuclear envelope inner membrane protein, nuclear protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=27.39 E-value=1.6e+02 Score=20.43 Aligned_cols=54 Identities=11% Similarity=0.100 Sum_probs=41.1
Q ss_pred CCCccCCCeEEEEeecCCCCccceeeEEEEEEecc--EEEEEEeccCCcceeeecCCCcccCC
Q psy985 37 NSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGD--FHVVEYLGCQSTFTEIVPPERMRQKN 97 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~~ep~gWW~a~V~~iKGd--f~vVey~~~d~~~teIV~~erLR~~n 97 (191)
...|.+||.|-..=.. -.+.++|+|..+--. .|.|.|.. + -+|=+.-..|||..
T Consensus 10 ~~~f~vgd~VmaRW~G----d~~yYparItSits~~~~Y~VkfKd-g--T~e~L~~kDIKp~~ 65 (68)
T 2dig_A 10 SRKFADGEVVRGRWPG----SSLYYEVEILSHDSTSQLYTVKYKD-G--TELELKENDIKSGP 65 (68)
T ss_dssp CCSSCSSCEEEEECTT----TCCEEEEEEEEEETTTTEEEEECTT-S--CEEEEETTTEECCC
T ss_pred ceEeecCCEEEEEccC----CccceEEEEEEeccCCceEEEEecC-C--CEEEechhccccCC
Confidence 4689999999887652 347899999999744 99999986 3 35666777777754
No 310
>2e3u_A PH-DIM2P, hypothetical protein PH1566; PRE-ribosomal RNA processing factor, RNA binding protein; 2.30A {Pyrococcus horikoshii} PDB: 3aev_B
Probab=27.31 E-value=2.1e+02 Score=23.26 Aligned_cols=56 Identities=14% Similarity=0.138 Sum_probs=41.1
Q ss_pred EEeecCChhHHHHHHhhh--chHHHHHhhhccEEEEcCCCCeeEEEeCc----hhhHhhhhhh
Q psy985 109 KFDIEVPLDVQEFAKMEG--AHKDFQKAIAAAIVRYIPDKGALSVISRD----EACQKRASMI 165 (191)
Q Consensus 109 k~~i~VPedLre~~~~~~--~h~dF~kaiga~~v~y~pe~~~Lvvls~~----e~~~kRA~mL 165 (191)
..++.||++-.-+..-.+ .-+..+...| +.+..++++|..-|-+++ ...+.+|.-+
T Consensus 35 i~~i~IP~~kig~lIG~gGk~Ik~I~e~tg-vkI~I~~~~g~V~I~~~~~t~d~~~i~kA~~~ 96 (219)
T 2e3u_A 35 EEYVKIPKDRIAVLIGKKGQTKKEIEKRTK-TKITIDSETGEVWITSTKETEDPLAVWKARDI 96 (219)
T ss_dssp EEEEECCHHHHHHHHCGGGHHHHHHHHHHT-EEEEECTTTCEEEEEECTTCCSHHHHHHHHHH
T ss_pred EEEEEeCHHHhhhhhcccHHHHHHHHHHHC-cEEEEEcCCCEEEEecCCCCCCHHHHHHHHHH
Confidence 447999999998887753 3447777766 779999899988877766 5666666543
No 311
>3db3_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, tandem tudor domains, LI metal binding, DNA replication; HET: M3L; 2.40A {Homo sapiens} PDB: 3db4_A 2l3r_A*
Probab=27.02 E-value=90 Score=25.01 Aligned_cols=48 Identities=15% Similarity=0.167 Sum_probs=34.2
Q ss_pred cccCcccccCCCCC-CCCCccCCCeEEE-EeecCCCCccceeeEEEEEEe
Q psy985 22 KFQFSMVRLPPRET-INSGFVENQEVEV-FSKATEGESCGWWKVIVKMIK 69 (191)
Q Consensus 22 ~vPf~~VRlPP~~~-~~~~~~egdeVEV-~sran~~ep~gWW~a~V~~iK 69 (191)
++++.+||.=.... .--++.+||.|-| |-.-+..|--=|+-|.|..++
T Consensus 74 ~~~~~~iRpRARt~l~w~~L~vGqvVMvNYN~d~PkerGfWYDaeI~~~~ 123 (161)
T 3db3_A 74 QMNSRDVRARARTIIKWQDLEVGQVVMLNYNPDNPKERGFWYDAEISRKR 123 (161)
T ss_dssp EEEGGGEECCCCCBCCGGGCCTTCEEEEEECSSSTTSCCEEEEEEEEEEE
T ss_pred ecchhccccceEEeccHHHCCcCcEEEEecCCCCccccceeEEEEEeeeh
Confidence 78899999655443 3448899999999 544445565667788887754
No 312
>2zjr_M 50S ribosomal protein L19; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: b.34.5.6 PDB: 1nwx_N* 1nwy_N* 1sm1_N* 1xbp_N* 2zjp_M* 2zjq_M 1nkw_N 3cf5_M* 3dll_M* 3pio_M* 3pip_M* 1pnu_N 1pny_N 1vor_Q 1vou_Q 1vow_Q 1voy_Q 1vp0_Q
Probab=26.68 E-value=33 Score=27.63 Aligned_cols=35 Identities=23% Similarity=0.244 Sum_probs=24.6
Q ss_pred CCCccCCCeEEEEeecCC--CCccceeeEEEEEEecc
Q psy985 37 NSGFVENQEVEVFSKATE--GESCGWWKVIVKMIKGD 71 (191)
Q Consensus 37 ~~~~~egdeVEV~sran~--~ep~gWW~a~V~~iKGd 71 (191)
-++|.+||.|.|..+-.+ .+---=+.|.|..++|.
T Consensus 24 iP~Fr~GDtV~V~vkI~EG~KeRiQ~FeGVVIarr~~ 60 (166)
T 2zjr_M 24 LPDFRPGDTVRVDTKVREGNRTRSQAFEGVVIAINGS 60 (166)
T ss_dssp CCCCSSSEEEEEECCTTSSSCCCCEEEECCEEECCCC
T ss_pred CCCcCCCCEEEEEEEEecCCeeeecceEEEEEEEeCC
Confidence 468999999999998654 34444566666666654
No 313
>2fuj_A Conserved hypothetical protein; structural genomics, conserved hypot protein, hot DOG domain, acyl-COA thioesterase, hydrolase; 1.70A {Xanthomonas campestris PV} SCOP: d.38.1.1
Probab=25.23 E-value=1.5e+02 Score=20.40 Aligned_cols=18 Identities=11% Similarity=-0.066 Sum_probs=13.7
Q ss_pred CCCCccCCCeEEEEeecC
Q psy985 36 INSGFVENQEVEVFSKAT 53 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran 53 (191)
+...+..||+|+|.++..
T Consensus 68 y~~~~~~gd~v~v~~~v~ 85 (137)
T 2fuj_A 68 YKRPLVWPNDILVELFVE 85 (137)
T ss_dssp ECSCCCTTCCEEEEEEEE
T ss_pred EeCCccCCCEEEEEEEEE
Confidence 566778899999987654
No 314
>2anr_A Neuro-oncological ventral antigen 1; protein-RNA complex, KH domain, hairpin, RNA-binding protein complex; HET: 5BU; 1.94A {Homo sapiens} PDB: 2ann_A*
Probab=24.94 E-value=2.2e+02 Score=21.44 Aligned_cols=65 Identities=12% Similarity=0.114 Sum_probs=43.9
Q ss_pred CceeEEeecCChhHHHHHHhh--hchHHHHHhhhccEEEEcCC------CCeeEEEeCchhhHhhhhhhhhhhh
Q psy985 105 KTFHKFDIEVPLDVQEFAKME--GAHKDFQKAIAAAIVRYIPD------KGALSVISRDEACQKRASMIKDMHF 170 (191)
Q Consensus 105 ~~f~k~~i~VPedLre~~~~~--~~h~dF~kaiga~~v~y~pe------~~~Lvvls~~e~~~kRA~mL~dmHf 170 (191)
+.-....+.||.+..-..==. ..-++.+...|| .+..+.+ ....+.|+++...+++|.-+....+
T Consensus 101 ~~~~~~~i~Vp~~~vg~iIGkgG~~Ik~i~~~tga-~I~i~~~~~~~~~~~~~v~I~G~~~~v~~A~~~I~~~i 173 (178)
T 2anr_A 101 DRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGA-WVQLSQKPDGINLQNRVVTVSGEPEQNRKAVELIIQKI 173 (178)
T ss_dssp GGGGEEEEEEEHHHHHHHHCGGGHHHHHHHHHSSC-EEEECCCC----CCEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEEchhheeeeECCCcHHHHHHHHHHCC-EEEEeCCCCCCCCCceEEEEEcCHHHHHHHHHHHHHHH
Confidence 334577899999987665332 334577777776 4555544 2368889999999999876554443
No 315
>3mxn_A RECQ-mediated genome instability protein 1; bloom syndrome, helicase, RMI, topoisomerase, replication PR replication; 1.55A {Homo sapiens} PDB: 4day_A 3nbh_A
Probab=24.21 E-value=64 Score=25.68 Aligned_cols=30 Identities=7% Similarity=0.158 Sum_probs=22.3
Q ss_pred hccEEEEcCCCCeeEEEeCchhhHhhhhhh
Q psy985 136 AAAIVRYIPDKGALSVISRDEACQKRASMI 165 (191)
Q Consensus 136 ga~~v~y~pe~~~Lvvls~~e~~~kRA~mL 165 (191)
+-..|.|+|..+.=||+.-.+-+..+.++|
T Consensus 122 clM~I~~~~~~~~pVV~~l~d~s~~~l~~L 151 (157)
T 3mxn_A 122 CLMTISFNPSLSKAMVLALQDVNMEHLENL 151 (157)
T ss_dssp EEEEEEEETTTTEEEEEEEECCCHHHHHHH
T ss_pred cEEEEEEcCCCCCCEEEEecCCCHHHHHHH
Confidence 567799999988888887776665555444
No 316
>2l66_A SSO7C4, transcriptional regulator, ABRB family; DNA binding protein, transcription regulator; NMR {Sulfolobus solfataricus}
Probab=24.07 E-value=13 Score=23.78 Aligned_cols=27 Identities=19% Similarity=0.187 Sum_probs=19.4
Q ss_pred ccccCCCCCCCCCccCCCeEEEEeecC
Q psy985 27 MVRLPPRETINSGFVENQEVEVFSKAT 53 (191)
Q Consensus 27 ~VRlPP~~~~~~~~~egdeVEV~sran 53 (191)
.+.+|..--....+.+||+|+++...+
T Consensus 13 qi~IPk~ir~~lgi~~Gd~v~i~~~~~ 39 (53)
T 2l66_A 13 QVTIPAKVRQKFQIKEGDLVKVTFDES 39 (53)
T ss_dssp CBCCCHHHHHHSCCCTTCEEEEEECSS
T ss_pred EEEeCHHHHHHcCcCCCCEEEEEEECC
Confidence 456665444567899999999987543
No 317
>3hm0_A Probable thioesterase; niaid, ssgcid, decode, UW, SBRI, infectious disease, rhizobiales, bacteremia, endocarditis, bacillary angiomatosis; 2.50A {Bartonella henselae}
Probab=23.46 E-value=1.6e+02 Score=22.04 Aligned_cols=22 Identities=0% Similarity=-0.025 Sum_probs=16.2
Q ss_pred CCCCccCCCeEEEEeecCCCCc
Q psy985 36 INSGFVENQEVEVFSKATEGES 57 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ep 57 (191)
+...+..||+|+|.++...-..
T Consensus 101 y~~p~~~gd~i~V~t~v~~~~~ 122 (167)
T 3hm0_A 101 FSRPAQIDNLLTIKTRISRLQG 122 (167)
T ss_dssp ECSCCCTTCEEEEEEEEEEECS
T ss_pred EecCCCCCCEEEEEEEEEEeCC
Confidence 6677888999999886544333
No 318
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=23.42 E-value=1.6e+02 Score=24.57 Aligned_cols=54 Identities=13% Similarity=0.204 Sum_probs=39.4
Q ss_pred ccCCCeEEEEeecCCCCccceeeEEEEEEec---------c--EEEEEEeccCCcceeeecCCCcccCC
Q psy985 40 FVENQEVEVFSKATEGESCGWWKVIVKMIKG---------D--FHVVEYLGCQSTFTEIVPPERMRQKN 97 (191)
Q Consensus 40 ~~egdeVEV~sran~~ep~gWW~a~V~~iKG---------d--f~vVey~~~d~~~teIV~~erLR~~n 97 (191)
.+.|+-|++.- ..--+|..|.|+.+-- | +|-|.|.+....-..-++...|||..
T Consensus 3 yki~~~vd~~d----~~~Gawfea~i~~v~~~~~~~~~~~d~~~y~v~y~~~~~~~~~~~~~~~irpra 67 (226)
T 3ask_A 3 YKVNEYVDARD----TNMGAWFEAQVVRVTRKAPSRPALEEDVIYHVKYDDYPENGVVQMNSRDVRARA 67 (226)
T ss_dssp SCTTCEEEEEC----TTTCCEEEEEEEEEEECC------CCCEEEEEEETTCGGGCEEEEEGGGEEECC
T ss_pred cccCceEEeee----cCCCceeEEEEEEEeccccccCCCCCceEEEeecccCcccCceecccccccccc
Confidence 35788888753 3355899998887642 4 89999998865556666777899876
No 319
>2qnd_A FMR1 protein; KH domain, eukaryotic KH domains, tandem KH domains, type I domains, fragIle X mental retardation protein, RNA BI protein; 1.90A {Homo sapiens} PDB: 2fmr_A
Probab=23.41 E-value=2.1e+02 Score=21.40 Aligned_cols=56 Identities=14% Similarity=0.113 Sum_probs=42.1
Q ss_pred eEEeecCChhHHHHHHhhhc--hHHHHHhhhccEEEEcCCCCeeEEEeCchhhHhhhh
Q psy985 108 HKFDIEVPLDVQEFAKMEGA--HKDFQKAIAAAIVRYIPDKGALSVISRDEACQKRAS 163 (191)
Q Consensus 108 ~k~~i~VPedLre~~~~~~~--h~dF~kaiga~~v~y~pe~~~Lvvls~~e~~~kRA~ 163 (191)
+..++.||.|..-.|--.+. -+..++-.|--.+.|+.+...+++...+++.+.+|.
T Consensus 4 ~~~~~~Vp~~~vG~~IG~~G~~I~~i~~e~gI~ii~~~~~~~~~i~~~~~p~~v~~~~ 61 (144)
T 2qnd_A 4 FHEQFIVREDLMGLAIGTHGANIQQARKVPGVTAIDLDEDTCTFHIYGEDQDAVKKAR 61 (144)
T ss_dssp CEEEEECCGGGHHHHHCGGGHHHHHHHTSTTEEEEEEETTTTEEEEEESSHHHHHHHH
T ss_pred eEEEEEECCcceeeEECCChhHHHHHHHHHCCeEeccCCCchheeeccCCHHHHHHHH
Confidence 35689999999999876433 236666667334789888888888888888888884
No 320
>4he6_A Peptidase family U32; ultra-tight crystal packing, unknown function; 1.10A {Geobacillus thermoleovorans} PDB: 4he5_A
Probab=23.22 E-value=43 Score=23.13 Aligned_cols=16 Identities=31% Similarity=0.482 Sum_probs=13.3
Q ss_pred CCCccCCCeEEEEeec
Q psy985 37 NSGFVENQEVEVFSKA 52 (191)
Q Consensus 37 ~~~~~egdeVEV~sra 52 (191)
.-.|.+||+||++++.
T Consensus 27 rN~f~~GD~iEi~~P~ 42 (89)
T 4he6_A 27 RNHFRPGDEVEFFGPE 42 (89)
T ss_dssp SSCBCTTCEEEEESTT
T ss_pred cCCcCCCCEEEEEcCC
Confidence 4578999999999864
No 321
>2hx5_A Hypothetical protein; thioesterase/thiol ester dehydrase-isomerase fold, structura genomics, joint center for structural genomics, JCSG; 1.50A {Prochlorococcus marinus} SCOP: d.38.1.1
Probab=22.92 E-value=2.1e+02 Score=20.32 Aligned_cols=20 Identities=0% Similarity=-0.064 Sum_probs=15.0
Q ss_pred CCCCccCCCeEEEEeecCCC
Q psy985 36 INSGFVENQEVEVFSKATEG 55 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran~~ 55 (191)
+...+..||+|+|.++....
T Consensus 76 y~~p~~~gd~i~v~t~v~~~ 95 (152)
T 2hx5_A 76 FRRPIHTGDALAMELRPERL 95 (152)
T ss_dssp ECSCCCTTCEEEEEEEEEEE
T ss_pred EcCCCCCCCEEEEEEEEEEe
Confidence 56677889999998865433
No 322
>1dtj_A RNA-binding neurooncological ventral antigen 2; KH domain, alpha-beta fold RNA-binding motif, immune system; 2.00A {Homo sapiens} SCOP: d.51.1.1 PDB: 1dt4_A
Probab=22.81 E-value=1.6e+02 Score=19.09 Aligned_cols=60 Identities=12% Similarity=0.139 Sum_probs=38.9
Q ss_pred EEeecCChhHHHHHHhh--hchHHHHHhhhccEEEEcCC-------CCeeEEEeCchhhHhhhhhhhhhh
Q psy985 109 KFDIEVPLDVQEFAKME--GAHKDFQKAIAAAIVRYIPD-------KGALSVISRDEACQKRASMIKDMH 169 (191)
Q Consensus 109 k~~i~VPedLre~~~~~--~~h~dF~kaiga~~v~y~pe-------~~~Lvvls~~e~~~kRA~mL~dmH 169 (191)
..++.||.+..-..=-. ..-++.+...|| .+..+++ ....+.|+++...+.+|.-+....
T Consensus 4 ~~~i~Ip~~~vg~IIGkgG~~Ik~I~~~tga-~I~i~~~~~~~~~~~~~~v~I~G~~~~v~~A~~~I~~~ 72 (76)
T 1dtj_A 4 LVEMAVPENLVGAILGKGGKTLVEYQELTGA-RIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQR 72 (76)
T ss_dssp EEEEEEETTTHHHHHCSTTHHHHHHHHHHCC-EEEECCTTCCSTTCCEEEEEEEESHHHHHHHHHHHHHH
T ss_pred EEEEEEChHHcceEECCCchHHHHHHHHhCC-EEEECcCCCCCCCCceeEEEEEeCHHHHHHHHHHHHHH
Confidence 34678888877654332 233467777776 4555543 236888888899999998766544
No 323
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=22.59 E-value=1.6e+02 Score=23.55 Aligned_cols=59 Identities=19% Similarity=0.257 Sum_probs=41.6
Q ss_pred ccCcccccCCCCC-CCCCccCCCeEEEEeecCCC-----CccceeeEEEEE------EeccEEEEEEeccC
Q psy985 23 FQFSMVRLPPRET-INSGFVENQEVEVFSKATEG-----ESCGWWKVIVKM------IKGDFHVVEYLGCQ 81 (191)
Q Consensus 23 vPf~~VRlPP~~~-~~~~~~egdeVEV~sran~~-----ep~gWW~a~V~~------iKGdf~vVey~~~d 81 (191)
+-|.-.|+.+..+ .+.+...||.+||+...... .+.|-|.-.++. -+||+..|.|.|+.
T Consensus 63 f~fdG~~i~~~~Tpk~L~~ed~d~I~~~~eq~Gg~t~~~~~sGl~~~vl~~G~G~~~~~gd~V~v~Y~g~l 133 (209)
T 3uf8_A 63 FLYDGIRIQADQTPEDLDMEDNDIIEAHREQIGGSTVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWL 133 (209)
T ss_dssp EEETTEECCTTCCTTTTTCCTTEEEEEECSCTTCCCCEECTTSCEEEEEECCCSCBCCTTCEEEEEEEEEE
T ss_pred EEECCEeccCCCChHHhhhcccccchhhccccccccccCCCCceEEEEEEcCCCCcCCCCCEEEEEEEEEE
Confidence 4455555566544 67888999999999987653 456766665553 35669999999874
No 324
>3ck1_A Putative thioesterase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.74A {Ralstonia eutropha}
Probab=22.42 E-value=2e+02 Score=20.09 Aligned_cols=18 Identities=0% Similarity=-0.197 Sum_probs=13.8
Q ss_pred CCCCccCCCeEEEEeecC
Q psy985 36 INSGFVENQEVEVFSKAT 53 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran 53 (191)
+...+..||+|+|.++..
T Consensus 68 y~~~~~~gd~v~v~~~v~ 85 (150)
T 3ck1_A 68 FVAPSRLGETLTRELRVV 85 (150)
T ss_dssp ECSCCBTTCEEEEEEEEE
T ss_pred EeCCCcCCCEEEEEEEEE
Confidence 566778899999988543
No 325
>3kyd_D Small ubiquitin-related modifier 1; SUMO, thioester, adenylation, inhibitor, TETR intermediate, ligase, nucleus, phosphoprotein; HET: VMX; 2.61A {Homo sapiens} SCOP: d.15.1.1
Probab=21.98 E-value=67 Score=24.01 Aligned_cols=31 Identities=26% Similarity=0.469 Sum_probs=23.5
Q ss_pred cccCcccccCCCCC-CCCCccCCCeEEEEeec
Q psy985 22 KFQFSMVRLPPRET-INSGFVENQEVEVFSKA 52 (191)
Q Consensus 22 ~vPf~~VRlPP~~~-~~~~~~egdeVEV~sra 52 (191)
+|-|..-||-+..+ .+.++..||.||||...
T Consensus 82 rFlFDG~rI~~~~TP~dL~MEDgD~IdV~~~Q 113 (115)
T 3kyd_D 82 RFLFEGQRIADNHTPKELGMEEEDVIEVYQEQ 113 (115)
T ss_dssp EEEETTEECCTTCCTTTTTCCTTCEEEEEECC
T ss_pred EEEECCeECCCCCCHHHcCCCCCCEEEEEeec
Confidence 45566667776544 68899999999999764
No 326
>1j4w_A FUSE binding protein; single-stranded DNA binding protein; HET: DNA; NMR {Homo sapiens} SCOP: d.51.1.1 d.51.1.1
Probab=21.47 E-value=2.6e+02 Score=20.94 Aligned_cols=63 Identities=17% Similarity=0.233 Sum_probs=40.7
Q ss_pred EEeecCChhHHHHHHhh--hchHHHHHhhhccEEEEcCCCC----eeEEEeCchhhHhhhhhhhhhhhhh
Q psy985 109 KFDIEVPLDVQEFAKME--GAHKDFQKAIAAAIVRYIPDKG----ALSVISRDEACQKRASMIKDMHFRN 172 (191)
Q Consensus 109 k~~i~VPedLre~~~~~--~~h~dF~kaiga~~v~y~pe~~----~Lvvls~~e~~~kRA~mL~dmHfr~ 172 (191)
...+.||.+..-..=-. ..-+..++..|+ .+..+++.+ +.+.|++....+.+|..+....++.
T Consensus 4 ~~~~~vp~~~vg~iIGkgG~~Ik~i~~~tg~-~I~i~~~~~~~~~r~v~I~G~~~~v~~A~~~I~~~~~~ 72 (174)
T 1j4w_A 4 MIDVPIPRFAVGIVIGRNGEMIKKIQNDAGV-RIQFKPDDGTTPERIAQITGPPDRAQHAAEIITDLLRS 72 (174)
T ss_dssp EEEEEEEHHHHHHHHCGGGHHHHHHHHHHCC-EEEEECCTTSCSEEEEEEEECHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEChhheeeeecCCchHHHHHHHHhCC-EEEEecCCCCCCccEEEEEeCHHHHHHHHHHHHHHHHh
Confidence 46788898876665332 233467777774 566655332 5778888888899987665544443
No 327
>1yfb_A Transition state regulatory protein ABRB; , homodimer, bioinformatics, swapped-hairpin barrel, transcription; NMR {Bacillus subtilis} SCOP: b.129.1.3 PDB: 1ysf_A 2k1n_A* 1z0r_A 2ro4_A 2fy9_A 2ro3_A
Probab=21.46 E-value=15 Score=24.43 Aligned_cols=26 Identities=19% Similarity=0.344 Sum_probs=19.1
Q ss_pred ccccCCCCCCCCCccCCCeEEEEeec
Q psy985 27 MVRLPPRETINSGFVENQEVEVFSKA 52 (191)
Q Consensus 27 ~VRlPP~~~~~~~~~egdeVEV~sra 52 (191)
.|.+|-.--....+.+||+|+++...
T Consensus 23 qItIPkeiR~~Lgi~~Gd~l~i~~~~ 48 (59)
T 1yfb_A 23 RVVIPIELRRTLGIAEKDALEIYVDD 48 (59)
T ss_dssp EEECCHHHHHHTTCCTTCEEEEEEET
T ss_pred EEEeCHHHHHHcCCCCCCEEEEEEEC
Confidence 46666544356789999999998854
No 328
>1gji_A C-REL protein, C-REL proto-oncogene protein; NF-KB/DNA complex, transcription factor, C-REL homodimer, transcription/DNA complex; 2.85A {Gallus gallus} SCOP: b.1.18.1 b.2.5.3
Probab=21.26 E-value=51 Score=28.42 Aligned_cols=47 Identities=23% Similarity=0.443 Sum_probs=32.2
Q ss_pred CcceeE--EEEeecCCCCcccccccCccc--------ccCCCCCCCCCccCCCeEEEEee
Q psy985 2 CGHSFN--VSNPFSLLRWQPESKFQFSMV--------RLPPRETINSGFVENQEVEVFSK 51 (191)
Q Consensus 2 ~~~~~~--v~V~f~eN~Wqpe~~vPf~~V--------RlPP~~~~~~~~~egdeVEV~sr 51 (191)
|.++-+ +-|.|+|+.|+..-.|.-+|| |.|| +..+|...=.|.++.+
T Consensus 201 c~kv~K~di~VrF~e~~We~~~~f~~~Dvh~Q~AIvf~TPp---Y~~~I~~pV~V~iqL~ 257 (275)
T 1gji_A 201 CDKVQKDDIEVRFVLDNWEAKGSFSQADVHRQVAIVFRTPP---FLRDITEPITVKMQLR 257 (275)
T ss_dssp ESCCCGGGCEEEEEETTEEEECBCCGGGEETTTEEEEECCC---CSSCCSSCEEEEEEEE
T ss_pred ecccccCCCEEEEEccceeeccccChhhhcceeeEEEeCCC---CCcCCCCCEEEEEEEE
Confidence 555554 778888999999888876776 5676 4336665555555443
No 329
>2cye_A TTHA1846, putative thioesterase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: COA; 1.90A {Thermus thermophilus} SCOP: d.38.1.1
Probab=21.21 E-value=1e+02 Score=21.12 Aligned_cols=18 Identities=17% Similarity=-0.009 Sum_probs=13.6
Q ss_pred CCCCccCCCeEEEEeecC
Q psy985 36 INSGFVENQEVEVFSKAT 53 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran 53 (191)
+...+..||+|+|.++..
T Consensus 62 y~~~~~~gd~l~v~~~v~ 79 (133)
T 2cye_A 62 YLRPILLGDEVFVGVRTV 79 (133)
T ss_dssp ECSCCBTTCEEEEEEEEE
T ss_pred EeccccCCCEEEEEEEEE
Confidence 556777899999987643
No 330
>1tyg_B YJBS; alpha beta barrel, protein-protein complex, THis, BIOS protein; 3.15A {Bacillus subtilis} SCOP: d.15.3.2
Probab=21.20 E-value=48 Score=23.46 Aligned_cols=16 Identities=6% Similarity=0.202 Sum_probs=13.4
Q ss_pred CCCccCCCeEEEEeec
Q psy985 37 NSGFVENQEVEVFSKA 52 (191)
Q Consensus 37 ~~~~~egdeVEV~sra 52 (191)
+..+++||+||++...
T Consensus 69 ~~~L~dGD~Vei~~~V 84 (87)
T 1tyg_B 69 EVELCDRDVIEIVHFV 84 (87)
T ss_dssp TSBCCSSSEEEEEEEC
T ss_pred CcCCCCCCEEEEEccc
Confidence 5679999999999753
No 331
>1wm3_A Ubiquitin-like protein SMT3B; ubiquitin fold, half-open barrel, two helices, protein transport; 1.20A {Homo sapiens} SCOP: d.15.1.1 PDB: 1wm2_A 3uin_B 3uio_B 2ckh_B
Probab=20.74 E-value=65 Score=21.19 Aligned_cols=28 Identities=18% Similarity=0.436 Sum_probs=21.2
Q ss_pred cccCcccccCCCCC-CCCCccCCCeEEEE
Q psy985 22 KFQFSMVRLPPRET-INSGFVENQEVEVF 49 (191)
Q Consensus 22 ~vPf~~VRlPP~~~-~~~~~~egdeVEV~ 49 (191)
++=|..-||.|..+ .+.++..||.++|+
T Consensus 43 rf~fdG~~l~~~~Tp~~l~medgD~Idv~ 71 (72)
T 1wm3_A 43 RFRFDGQPINETDTPAQLEMEDEDTIDVF 71 (72)
T ss_dssp EEEETTEECCTTCCTTTTTCCTTEEEEEE
T ss_pred EEEECCEEcCCCCCHHHcCCCCCCEEEEE
Confidence 45566666766644 68899999999997
No 332
>2oiw_A Putative 4-hydroxybenzoyl-COA thioesterase; structural genomics, protein structure initiative, midwest center for structu genomics; 2.00A {Geobacillus stearothermophilus} SCOP: d.38.1.1
Probab=20.65 E-value=2.1e+02 Score=19.59 Aligned_cols=18 Identities=17% Similarity=0.222 Sum_probs=13.3
Q ss_pred CCCCccCCCeEEEEeecC
Q psy985 36 INSGFVENQEVEVFSKAT 53 (191)
Q Consensus 36 ~~~~~~egdeVEV~sran 53 (191)
+...+..||+|+|.++..
T Consensus 62 y~~~~~~gd~v~v~~~v~ 79 (136)
T 2oiw_A 62 YVNQMYYGQDVTVYTGIE 79 (136)
T ss_dssp ECSCCCTTSCEEEEEEEE
T ss_pred EcccCCCCCEEEEEEEEE
Confidence 556677899999987654
No 333
>2cu3_A Unknown function protein; thermus thermophilus HB8, structural genomics, riken structu genomics/proteomics initiative, RSGI, NPPSFA; 1.70A {Thermus thermophilus} SCOP: d.15.3.2 PDB: 2htm_E
Probab=20.55 E-value=64 Score=20.79 Aligned_cols=17 Identities=18% Similarity=0.173 Sum_probs=13.7
Q ss_pred CCCCccCCCeEEEEeec
Q psy985 36 INSGFVENQEVEVFSKA 52 (191)
Q Consensus 36 ~~~~~~egdeVEV~sra 52 (191)
.+..+++||+||++...
T Consensus 45 ~~~~L~dgD~v~i~~~V 61 (64)
T 2cu3_A 45 PDRPLRDGDVVEVVALM 61 (64)
T ss_dssp CCCCCCTTCEEEEEECC
T ss_pred CCcCCCCCCEEEEEeec
Confidence 35679999999999753
No 334
>3nmq_A Heat shock protein HSP 90-beta; ATPase, chaperone-chaperone inhibitor complex; HET: 7PP; 2.20A {Homo sapiens} SCOP: d.122.1.1
Probab=20.33 E-value=43 Score=28.02 Aligned_cols=21 Identities=24% Similarity=0.615 Sum_probs=17.3
Q ss_pred ccCCCeEEEEeecCCCCccce
Q psy985 40 FVENQEVEVFSKATEGESCGW 60 (191)
Q Consensus 40 ~~egdeVEV~sran~~ep~gW 60 (191)
|.++|+|+|.|+.++.+..-|
T Consensus 141 f~vadkv~V~Sk~~~~~~~~W 161 (239)
T 3nmq_A 141 YLVAEKVVVITKHNDDEQYAW 161 (239)
T ss_dssp GGTEEEEEEEEECTTSCCEEE
T ss_pred cccCCEEEEEEeeCCCceeEE
Confidence 678999999999987766554
No 335
>2kl0_A Putative thiamin biosynthesis THis; structural genomics, PSI-2, protein structure initiative, N structural genomics consortium, NESG; NMR {Rhodopseudomonas palustris} PDB: 2lek_A
Probab=20.07 E-value=55 Score=22.14 Aligned_cols=17 Identities=12% Similarity=0.352 Sum_probs=14.2
Q ss_pred CCCccCCCeEEEEeecC
Q psy985 37 NSGFVENQEVEVFSKAT 53 (191)
Q Consensus 37 ~~~~~egdeVEV~sran 53 (191)
+..+++||.||+++...
T Consensus 47 ~~~L~dGD~veIv~~Vg 63 (73)
T 2kl0_A 47 ETPVTAGDEIEILTPRQ 63 (73)
T ss_dssp TCBCCTTCEEEEECCCC
T ss_pred cccCCCCCEEEEEcccc
Confidence 57899999999998653
Done!