BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9859
(78 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P20911|CDK7_XENLA Cyclin-dependent kinase 7 OS=Xenopus laevis GN=cdk7 PE=1 SV=1
Length = 352
Score = 71.6 bits (174), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/45 (77%), Positives = 38/45 (84%)
Query: 3 HFATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
FATV+KARD TD IVA+KKIKLG A+A DGINRTALREIKLL
Sbjct: 28 QFATVYKARDKNTDRIVAIKKIKLGHRAEANDGINRTALREIKLL 72
>sp|P51952|CDK7_RAT Cyclin-dependent kinase 7 (Fragment) OS=Rattus norvegicus GN=Cdk7
PE=2 SV=2
Length = 329
Score = 71.6 bits (174), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/45 (75%), Positives = 39/45 (86%)
Query: 3 HFATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
FATV+KARD T+ IVA+KKIKLG ++AKDGINRTALREIKLL
Sbjct: 14 QFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLL 58
>sp|Q03147|CDK7_MOUSE Cyclin-dependent kinase 7 OS=Mus musculus GN=Cdk7 PE=1 SV=2
Length = 346
Score = 71.6 bits (174), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/45 (75%), Positives = 39/45 (86%)
Query: 3 HFATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
FATV+KARD T+ IVA+KKIKLG ++AKDGINRTALREIKLL
Sbjct: 22 QFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLL 66
>sp|P50613|CDK7_HUMAN Cyclin-dependent kinase 7 OS=Homo sapiens GN=CDK7 PE=1 SV=1
Length = 346
Score = 71.6 bits (174), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/45 (75%), Positives = 39/45 (86%)
Query: 3 HFATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
FATV+KARD T+ IVA+KKIKLG ++AKDGINRTALREIKLL
Sbjct: 22 QFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLL 66
>sp|P51953|CDK7_CARAU Cyclin-dependent kinase 7 OS=Carassius auratus GN=cdk7 PE=2 SV=1
Length = 344
Score = 67.4 bits (163), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/45 (73%), Positives = 38/45 (84%)
Query: 3 HFATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
FATV+KARD T+ IVA+KKIK+G +AKDGINRTALREIKLL
Sbjct: 22 QFATVYKARDKTTNTIVAIKKIKVGHRTEAKDGINRTALREIKLL 66
>sp|A2Y4B6|CDKD1_ORYSI Cyclin-dependent kinase D-1 OS=Oryza sativa subsp. indica
GN=CDKD-1 PE=2 SV=1
Length = 424
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/44 (56%), Positives = 32/44 (72%), Gaps = 3/44 (6%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
+ VFKA D +T VA+KKI+LG + K+G+N TALREIKLL
Sbjct: 30 YGVVFKADDTKTGNTVAIKKIRLGKY---KEGVNFTALREIKLL 70
>sp|P29620|CDKD1_ORYSJ Cyclin-dependent kinase D-1 OS=Oryza sativa subsp. japonica
GN=CDKD-1 PE=1 SV=1
Length = 424
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/44 (56%), Positives = 32/44 (72%), Gaps = 3/44 (6%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
+ VFKA D +T VA+KKI+LG + K+G+N TALREIKLL
Sbjct: 30 YGVVFKAVDTKTGNTVAIKKIRLGKY---KEGVNFTALREIKLL 70
>sp|Q9LMT0|CDKD3_ARATH Cyclin-dependent kinase D-3 OS=Arabidopsis thaliana GN=CDKD-3
PE=1 SV=1
Length = 391
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 32/44 (72%), Gaps = 3/44 (6%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
+ VFKA D +T+ VA+KKI+LG ++G+N TALREIK+L
Sbjct: 23 YGVVFKATDTKTEQTVAIKKIRLGKQ---REGVNITALREIKML 63
>sp|Q9C9M7|CDKD2_ARATH Cyclin-dependent kinase D-2 OS=Arabidopsis thaliana GN=CDKD-2
PE=1 SV=1
Length = 348
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/44 (56%), Positives = 32/44 (72%), Gaps = 3/44 (6%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
+ V+KA D +T VAVKKI+LG + K+G+N TALREIKLL
Sbjct: 24 YGVVYKATDTKTGKTVAVKKIRLG---NQKEGVNFTALREIKLL 64
>sp|Q9C9U2|CDKD1_ARATH Cyclin-dependent kinase D-1 OS=Arabidopsis thaliana GN=CDKD-1
PE=1 SV=1
Length = 398
Score = 46.2 bits (108), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/44 (54%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
+ VFKA D + VA+KKI+LG K+G+N TALREIKLL
Sbjct: 22 YGVVFKATDTKNGETVAIKKIRLGKE---KEGVNVTALREIKLL 62
>sp|Q4KM47|CDK10_RAT Cyclin-dependent kinase 10 OS=Rattus norvegicus GN=Cdk10 PE=2
SV=1
Length = 358
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 3/44 (6%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
+ V++ARD +TD IVA+KK+++ KDGI ++LREI LL
Sbjct: 48 YGIVYRARDTQTDEIVALKKVRMDKE---KDGIPISSLREITLL 88
>sp|Q3UMM4|CDK10_MOUSE Cyclin-dependent kinase 10 OS=Mus musculus GN=Cdk10 PE=2 SV=1
Length = 360
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 3/44 (6%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
+ V++ARD +TD IVA+KK+++ KDGI ++LREI LL
Sbjct: 50 YGIVYRARDTQTDEIVALKKVRMDKE---KDGIPISSLREITLL 90
>sp|Q15131|CDK10_HUMAN Cyclin-dependent kinase 10 OS=Homo sapiens GN=CDK10 PE=1 SV=1
Length = 360
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 3/44 (6%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
+ V++ARD +TD IVA+KK+++ KDGI ++LREI LL
Sbjct: 50 YGIVYRARDTQTDEIVALKKVRMDKE---KDGIPISSLREITLL 90
>sp|Q12126|CRK1_SCHPO Serine/threonine-protein kinase crk1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=crk1 PE=1 SV=1
Length = 335
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/44 (54%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
+A VF R ET+ VA+KKIK+G KDGI+ +ALREIK L
Sbjct: 22 YAVVFLGRQKETNRRVAIKKIKVGQF---KDGIDISALREIKFL 62
>sp|P54664|CC2H1_TRYCO Cell division control protein 2 homolog 1 OS=Trypanosoma
congolense GN=CRK1 PE=3 SV=1
Length = 301
Score = 42.7 bits (99), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 33/44 (75%), Gaps = 3/44 (6%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
+ V++ARDI TD+IVA+K+I+L + ++G+ TA+REI +L
Sbjct: 16 YGVVYRARDITTDVIVALKRIRLES---VEEGVPCTAIREISIL 56
>sp|Q55GS4|CDK10_DICDI Probable cyclin-dependent kinase 10 OS=Dictyostelium discoideum
GN=cdk10 PE=2 SV=1
Length = 366
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
+ V K RD ET IVA+KK+K+G KDGI T+LREI++L
Sbjct: 18 YGIVSKGRDKETGRIVALKKVKIGQQ--DKDGIPLTSLREIQIL 59
>sp|Q2TBL8|CDK10_BOVIN Cyclin-dependent kinase 10 OS=Bos taurus GN=CDK10 PE=2 SV=1
Length = 361
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
+ V++ARD TD IVA+KK+++ KDG+ ++LREI LL
Sbjct: 48 YGIVYRARDTHTDEIVALKKVRMDKE---KDGVPISSLREITLL 88
>sp|Q38773|CDC2B_ANTMA Cell division control protein 2 homolog B (Fragment)
OS=Antirrhinum majus GN=CDC2B PE=2 SV=1
Length = 280
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
+ V+KARDIET+ +A+KKI+L +G+ TA+REI LL
Sbjct: 2 YGVVYKARDIETNEDIALKKIRL---EQEDEGVPSTAIREISLL 42
>sp|P38973|CC2H1_TRYBB Cell division control protein 2 homolog 1 OS=Trypanosoma brucei
brucei GN=CRK1 PE=3 SV=1
Length = 301
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
+ VF+ARD+ T IVAVK+I+L ++G+ TA+REI +L
Sbjct: 16 YGVVFRARDVTTGTIVAVKRIRL---EKEEEGVPCTAIREISIL 56
>sp|P23437|CDK2_XENLA Cyclin-dependent kinase 2 OS=Xenopus laevis GN=cdk2 PE=1 SV=3
Length = 297
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
+ V+KAR+ ET IVA+KKI+L T +G+ TA+REI LL
Sbjct: 15 YGVVYKARNRETGEIVALKKIRLDTET---EGVPSTAIREISLL 55
>sp|Q6ZAG3|CDKC3_ORYSJ Cyclin-dependent kinase C-3 OS=Oryza sativa subsp. japonica
GN=CDKC-1 PE=2 SV=2
Length = 324
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLLSVTISRENWLILRVIL 63
+ VF+A DI T A+KKIKL D K+G R LREIKLL + EN + L+ I+
Sbjct: 38 YGEVFEAMDIITGERAALKKIKLD---DGKEGFPRQILREIKLLK-KLDHENIIRLKEIV 93
>sp|Q03114|CDK5_RAT Cyclin-dependent kinase 5 OS=Rattus norvegicus GN=Cdk5 PE=1 SV=1
Length = 292
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 3/44 (6%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
+ TVFKA++ ET IVA+K+++L D +G+ +ALREI LL
Sbjct: 15 YGTVFKAKNRETHEIVALKRVRLD---DDDEGVPSSALREICLL 55
>sp|P49615|CDK5_MOUSE Cyclin-dependent kinase 5 OS=Mus musculus GN=Cdk5 PE=1 SV=1
Length = 292
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 3/44 (6%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
+ TVFKA++ ET IVA+K+++L D +G+ +ALREI LL
Sbjct: 15 YGTVFKAKNRETHEIVALKRVRLD---DDDEGVPSSALREICLL 55
>sp|Q00535|CDK5_HUMAN Cyclin-dependent kinase 5 OS=Homo sapiens GN=CDK5 PE=1 SV=3
Length = 292
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 3/44 (6%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
+ TVFKA++ ET IVA+K+++L D +G+ +ALREI LL
Sbjct: 15 YGTVFKAKNRETHEIVALKRVRLD---DDDEGVPSSALREICLL 55
>sp|Q02399|CDK5_BOVIN Cyclin-dependent kinase 5 OS=Bos taurus GN=CDK5 PE=1 SV=2
Length = 292
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 3/44 (6%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
+ TVFKA++ ET IVA+K+++L D +G+ +ALREI LL
Sbjct: 15 YGTVFKAKNRETHEIVALKRVRLD---DDDEGVPSSALREICLL 55
>sp|Q9NYV4|CDK12_HUMAN Cyclin-dependent kinase 12 OS=Homo sapiens GN=CDK12 PE=1 SV=2
Length = 1490
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 33/50 (66%), Gaps = 3/50 (6%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLLSVTISR 53
+ V+KA+D +T +VA+KK++L + K+G TA+REIK+L I R
Sbjct: 738 YGQVYKAKDKDTGELVALKKVRLD---NEKEGFPITAIREIKILRQLIHR 784
>sp|E1BB50|CDK12_BOVIN Cyclin-dependent kinase 12 OS=Bos taurus GN=CDK12 PE=3 SV=1
Length = 1264
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 33/50 (66%), Gaps = 3/50 (6%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLLSVTISR 53
+ V+KA+D +T +VA+KK++L + K+G TA+REIK+L I R
Sbjct: 738 YGQVYKAKDKDTGELVALKKVRLD---NEKEGFPITAIREIKILRQLIHR 784
>sp|D2H526|CDK12_AILME Cyclin-dependent kinase 12 OS=Ailuropoda melanoleuca GN=CDK12 PE=3
SV=1
Length = 1491
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 33/50 (66%), Gaps = 3/50 (6%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLLSVTISR 53
+ V+KA+D +T +VA+KK++L + K+G TA+REIK+L I R
Sbjct: 739 YGQVYKAKDKDTGELVALKKVRLD---NEKEGFPITAIREIKILRQLIHR 785
>sp|Q69ZA1|CDK13_MOUSE Cyclin-dependent kinase 13 OS=Mus musculus GN=Cdk13 PE=1 SV=3
Length = 1511
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 31/44 (70%), Gaps = 3/44 (6%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
+ V+KARD +T +VA+KK++L + K+G TA+REIK+L
Sbjct: 716 YGQVYKARDKDTGEMVALKKVRLD---NEKEGFPITAIREIKIL 756
>sp|Q14004|CDK13_HUMAN Cyclin-dependent kinase 13 OS=Homo sapiens GN=CDK13 PE=1 SV=2
Length = 1512
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 31/44 (70%), Gaps = 3/44 (6%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
+ V+KARD +T +VA+KK++L + K+G TA+REIK+L
Sbjct: 716 YGQVYKARDKDTGEMVALKKVRLD---NEKEGFPITAIREIKIL 756
>sp|E1BB52|CDK13_BOVIN Cyclin-dependent kinase 13 OS=Bos taurus GN=CDK13 PE=3 SV=1
Length = 1512
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 31/44 (70%), Gaps = 3/44 (6%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
+ V+KARD +T +VA+KK++L + K+G TA+REIK+L
Sbjct: 717 YGQVYKARDKDTGEMVALKKVRLD---NEKEGFPITAIREIKIL 757
>sp|Q4WTN5|BUR1_ASPFU Serine/threonine-protein kinase bur1 OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC
A1100) GN=bur1 PE=3 SV=1
Length = 580
Score = 39.3 bits (90), Expect = 0.006, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLLSVTISRENWLILR 60
F V+KAR + IVA+KKI + + KDG TALREIKLL + +S N L L+
Sbjct: 36 FGEVYKARSKKDGSIVALKKILM---HNEKDGFPITALREIKLLKM-LSHRNILQLK 88
>sp|Q96VK3|BUR1_EMENI Serine/threonine-protein kinase bur1 OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=ptkA PE=2 SV=1
Length = 544
Score = 38.9 bits (89), Expect = 0.011, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLLSVTISRENWLILR 60
F V+KAR IVA+KKI + + +DG TALREIKLL + +S N + LR
Sbjct: 36 FGEVYKARAKRDGSIVALKKILM---HNERDGFPITALREIKLLKM-LSHTNIMQLR 88
>sp|P51166|CDK5_XENLA Cyclin-dependent kinase 5 OS=Xenopus laevis GN=cdk5 PE=2 SV=1
Length = 292
Score = 38.5 bits (88), Expect = 0.011, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 31/44 (70%), Gaps = 3/44 (6%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
+ TVFKA++ +T IVA+K+++L D +G+ +ALREI LL
Sbjct: 15 YGTVFKAKNRDTHEIVALKRVRLD---DDDEGVPSSALREICLL 55
>sp|B5DE93|CDK12_XENTR Cyclin-dependent kinase 12 OS=Xenopus tropicalis GN=cdk12 PE=2 SV=1
Length = 1239
Score = 38.5 bits (88), Expect = 0.011, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 33/50 (66%), Gaps = 3/50 (6%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLLSVTISR 53
+ V+KA+D +T +VA+KK++L + K+G TA+REIK+L I +
Sbjct: 721 YGQVYKAKDKDTGELVALKKVRLD---NEKEGFPITAIREIKILRQLIHK 767
>sp|Q8LG64|CKB22_ARATH Cyclin-dependent kinase B2-2 OS=Arabidopsis thaliana GN=CDKB2-2
PE=1 SV=2
Length = 315
Score = 38.5 bits (88), Expect = 0.012, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLLSVTISRENWLILRVIL 63
+ V++AR+ T MIVA+KK +L H D ++G+ T LREI +L + ++R+ ++ + +
Sbjct: 27 YGKVYRAREKATGMIVALKKTRL--HED-EEGVPPTTLREISILRM-LARDPHIVRLMDV 82
Query: 64 KMNLHKVTKSTINIL 78
K ++K K+ + ++
Sbjct: 83 KQGINKEGKTVLYLV 97
>sp|Q3MJK5|CDK12_RAT Cyclin-dependent kinase 12 OS=Rattus norvegicus GN=Cdk12 PE=1 SV=1
Length = 1484
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 31/44 (70%), Gaps = 3/44 (6%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
+ V+KA+D +T +VA+KK++L + K+G TA+REIK+L
Sbjct: 734 YGQVYKAKDKDTGELVALKKVRLD---NEKEGFPITAIREIKIL 774
>sp|Q14AX6|CDK12_MOUSE Cyclin-dependent kinase 12 OS=Mus musculus GN=Cdk12 PE=1 SV=2
Length = 1484
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 31/44 (70%), Gaps = 3/44 (6%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
+ V+KA+D +T +VA+KK++L + K+G TA+REIK+L
Sbjct: 734 YGQVYKAKDKDTGELVALKKVRLD---NEKEGFPITAIREIKIL 774
>sp|Q4KM34|CDK20_RAT Cyclin-dependent kinase 20 OS=Rattus norvegicus GN=Cdk20 PE=2
SV=2
Length = 346
Score = 38.1 bits (87), Expect = 0.016, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 7 VFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
VFKA+ +ET IVA+KK+ L +DGI ALREIK L
Sbjct: 18 VFKAKHVETGEIVALKKVAL---RRLEDGIPNQALREIKAL 55
>sp|Q5R7I7|CDK20_PONAB Cyclin-dependent kinase 20 OS=Pongo abelii GN=CDK20 PE=2 SV=1
Length = 346
Score = 38.1 bits (87), Expect = 0.016, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 7 VFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
VFKA+ +ET IVA+KK+ L +DGI ALREIK L
Sbjct: 18 VFKAKHVETGEIVALKKVAL---RRLEDGIPNQALREIKAL 55
>sp|Q9JHU3|CDK20_MOUSE Cyclin-dependent kinase 20 OS=Mus musculus GN=Cdk20 PE=1 SV=1
Length = 346
Score = 38.1 bits (87), Expect = 0.016, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 7 VFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
VFKA+ +ET IVA+KK+ L +DGI ALREIK L
Sbjct: 18 VFKAKHVETGEIVALKKVAL---RRLEDGIPNQALREIKAL 55
>sp|Q9VP22|CDK12_DROME Cyclin-dependent kinase 12 OS=Drosophila melanogaster GN=Cdk12 PE=1
SV=1
Length = 1157
Score = 38.1 bits (87), Expect = 0.017, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
+ V+KARD T+ +VA+KK++L K+G TA+REIK+L
Sbjct: 815 YGQVYKARDHHTNDMVALKKVRL---EHEKEGFPITAVREIKIL 855
>sp|Q6I5Y0|CDKC1_ORYSJ Cyclin-dependent kinase C-1 OS=Oryza sativa subsp. japonica
GN=CDKC-1 PE=2 SV=1
Length = 519
Score = 38.1 bits (87), Expect = 0.017, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLLSVTISRENWLILRVIL 63
+ V+ AR+ ET IVA+KKI++ + ++G TA+REIK+L + +N + L+ I+
Sbjct: 36 YGQVYMARETETQEIVALKKIRMD---NEREGFPITAIREIKILK-KLHHQNVIQLKEIV 91
>sp|P52389|CDC2_VIGUN Cell division control protein 2 homolog OS=Vigna unguiculata
GN=CDC2 PE=2 SV=1
Length = 294
Score = 38.1 bits (87), Expect = 0.018, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
+ V+KARD TD +A+KKI+L +G+ TA+REI LL
Sbjct: 15 YGVVYKARDRVTDETIALKKIRL---EQEDEGVPSTAIREISLL 55
>sp|Q6C7U8|PHO85_YARLI Negative regulator of the PHO system OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=PHO85 PE=3 SV=1
Length = 294
Score = 37.7 bits (86), Expect = 0.019, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 9/68 (13%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLLSVTISRENWLILRVIL 63
+ATV+K R+ T +VA+K+I L D+++G TA+REI L+ + EN + L ++
Sbjct: 18 YATVYKGRNRTTGQLVALKEINL----DSEEGTPSTAIREISLMK-ELKHENIVTLYDVI 72
Query: 64 ----KMNL 67
K+NL
Sbjct: 73 HTENKLNL 80
>sp|Q9LFT8|CDKC1_ARATH Cyclin-dependent kinase C-1 OS=Arabidopsis thaliana GN=CDKC-1
PE=1 SV=1
Length = 505
Score = 37.7 bits (86), Expect = 0.021, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 39/60 (65%), Gaps = 4/60 (6%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLLSVTISRENWLILRVIL 63
+ V+ A++I+T IVA+KKI++ + ++G TA+REIK+L + EN + L+ I+
Sbjct: 37 YGQVYMAKEIKTGEIVALKKIRMD---NEREGFPITAIREIKILK-KLHHENVIQLKEIV 92
>sp|Q06309|CRK1_LEIME Cell division protein kinase 2 homolog CRK1 OS=Leishmania
mexicana GN=CRK1 PE=2 SV=1
Length = 301
Score = 37.7 bits (86), Expect = 0.021, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
+ V+KARD T VA+K+I+L + ++G+ TA+REI LL
Sbjct: 16 YGVVYKARDTSTAATVALKRIRLDSE---EEGVPCTAIREISLL 56
>sp|Q54RB2|CDK11_DICDI Cyclin-dependent kinase 11 OS=Dictyostelium discoideum GN=cdk11
PE=3 SV=1
Length = 358
Score = 37.7 bits (86), Expect = 0.021, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 44/68 (64%), Gaps = 5/68 (7%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLLSVTISRENWL-ILRVI 62
F V+ A+D ET+ IVA+KKIK+ ++GI T++REIK+L + + +N + I ++
Sbjct: 63 FGVVYCAQDKETEEIVALKKIKM---EREREGIPITSVREIKVL-MELKHDNIVQIKEIV 118
Query: 63 LKMNLHKV 70
L N++ +
Sbjct: 119 LGKNINSI 126
>sp|P24941|CDK2_HUMAN Cyclin-dependent kinase 2 OS=Homo sapiens GN=CDK2 PE=1 SV=2
Length = 298
Score = 37.7 bits (86), Expect = 0.023, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLL 47
+ V+KAR+ T +VA+KKI+L T +G+ TA+REI LL
Sbjct: 15 YGVVYKARNKLTGEVVALKKIRLDTET---EGVPSTAIREISLL 55
>sp|Q09437|YP62_CAEEL Putative serine/threonine-protein kinase B0495.2 OS=Caenorhabditis
elegans GN=B0495.2 PE=3 SV=1
Length = 719
Score = 37.7 bits (86), Expect = 0.023, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 4 FATVFKARDIETDMIVAVKKIKLGTHADAKDGINRTALREIKLLSVTISRENWL-ILRVI 62
F V++ +D TD IVA+K++K+ K+G TALREI +L + N + + ++
Sbjct: 367 FGVVYRGKDKRTDEIVALKRLKM---EKEKEGFPITALREINMLLKAGNHPNIVNVKEIL 423
Query: 63 LKMNLHKV 70
L N+ K+
Sbjct: 424 LGSNMDKI 431
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.135 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,472,137
Number of Sequences: 539616
Number of extensions: 615504
Number of successful extensions: 2314
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 157
Number of HSP's that attempted gapping in prelim test: 2163
Number of HSP's gapped (non-prelim): 195
length of query: 78
length of database: 191,569,459
effective HSP length: 49
effective length of query: 29
effective length of database: 165,128,275
effective search space: 4788719975
effective search space used: 4788719975
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)