Query psy9862
Match_columns 378
No_of_seqs 166 out of 2483
Neff 10.0
Searched_HMMs 46136
Date Fri Aug 16 21:31:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9862.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/9862hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0472|consensus 100.0 4.5E-30 9.9E-35 225.5 0.8 326 29-375 115-562 (565)
2 PLN00113 leucine-rich repeat r 99.9 1.7E-27 3.7E-32 248.8 16.9 321 28-362 69-425 (968)
3 PLN00113 leucine-rich repeat r 99.9 1.1E-26 2.3E-31 243.0 17.4 323 28-363 188-569 (968)
4 KOG4194|consensus 99.9 5E-28 1.1E-32 221.7 6.0 344 21-375 71-467 (873)
5 KOG0472|consensus 99.9 1.6E-29 3.4E-34 222.1 -6.7 284 30-374 47-330 (565)
6 KOG0444|consensus 99.9 2.1E-27 4.5E-32 219.4 -0.0 285 29-354 79-375 (1255)
7 KOG0444|consensus 99.9 1.6E-27 3.5E-32 220.1 -0.8 306 30-363 9-337 (1255)
8 KOG4194|consensus 99.9 4.3E-25 9.3E-30 202.6 5.7 327 28-370 102-466 (873)
9 KOG0617|consensus 99.9 1.1E-25 2.3E-30 176.5 -2.6 203 145-378 32-236 (264)
10 PRK15387 E3 ubiquitin-protein 99.9 1.4E-21 3.1E-26 192.6 15.7 262 28-361 201-465 (788)
11 PRK15387 E3 ubiquitin-protein 99.8 3.7E-20 8.1E-25 182.6 15.2 241 28-335 222-466 (788)
12 PRK15370 E3 ubiquitin-protein 99.8 3.1E-20 6.6E-25 184.2 13.1 250 28-354 178-428 (754)
13 PLN03210 Resistant to P. syrin 99.8 7.7E-19 1.7E-23 185.0 20.4 242 96-352 633-904 (1153)
14 KOG0617|consensus 99.8 1.5E-21 3.3E-26 153.3 -5.1 183 96-292 32-216 (264)
15 KOG4237|consensus 99.8 1.7E-20 3.6E-25 165.2 -2.1 299 20-376 59-375 (498)
16 KOG0618|consensus 99.8 1E-19 2.2E-24 175.5 2.1 174 169-356 241-422 (1081)
17 PRK15370 E3 ubiquitin-protein 99.8 2.7E-18 5.8E-23 170.4 12.2 204 102-360 203-406 (754)
18 KOG0618|consensus 99.7 5.4E-19 1.2E-23 170.6 1.2 246 97-353 219-488 (1081)
19 cd00116 LRR_RI Leucine-rich re 99.7 1.4E-18 3.1E-23 159.2 1.1 156 32-205 2-178 (319)
20 PLN03210 Resistant to P. syrin 99.7 7E-16 1.5E-20 162.8 18.3 285 48-360 553-888 (1153)
21 KOG0532|consensus 99.6 5.8E-18 1.3E-22 155.7 -3.1 216 126-377 55-270 (722)
22 cd00116 LRR_RI Leucine-rich re 99.6 1.3E-16 2.7E-21 146.3 0.1 261 57-362 2-299 (319)
23 KOG4237|consensus 99.6 6.7E-17 1.5E-21 142.7 -5.5 254 102-364 71-345 (498)
24 KOG0532|consensus 99.4 9.9E-15 2.1E-19 134.7 -1.9 195 122-351 76-270 (722)
25 KOG1909|consensus 99.3 4.4E-14 9.5E-19 123.3 -3.2 195 49-262 26-254 (382)
26 COG4886 Leucine-rich repeat (L 99.3 8E-12 1.7E-16 118.0 7.8 201 125-362 97-298 (394)
27 KOG3207|consensus 99.2 3.1E-12 6.8E-17 114.9 3.2 165 23-207 116-286 (505)
28 KOG3207|consensus 99.2 2E-12 4.4E-17 116.1 1.4 201 119-354 119-339 (505)
29 COG4886 Leucine-rich repeat (L 99.2 2.7E-11 5.8E-16 114.4 6.5 194 103-330 98-292 (394)
30 PF14580 LRR_9: Leucine-rich r 99.1 2E-11 4.3E-16 100.0 3.1 131 45-200 11-148 (175)
31 PF14580 LRR_9: Leucine-rich r 99.1 1.1E-10 2.5E-15 95.5 4.1 102 99-205 21-126 (175)
32 KOG1259|consensus 99.0 2.1E-10 4.6E-15 98.7 1.5 107 145-264 283-389 (490)
33 KOG1259|consensus 98.9 1.5E-10 3.4E-15 99.5 -0.2 135 117-266 280-416 (490)
34 KOG4658|consensus 98.9 4.2E-09 9.1E-14 107.1 9.4 194 46-263 516-731 (889)
35 KOG1909|consensus 98.9 6.4E-10 1.4E-14 97.6 1.1 238 29-288 31-311 (382)
36 KOG0531|consensus 98.7 6E-09 1.3E-13 98.8 2.6 155 93-265 91-248 (414)
37 COG5238 RNA1 Ran GTPase-activa 98.6 7.1E-09 1.5E-13 88.2 0.6 185 117-307 88-318 (388)
38 KOG0531|consensus 98.6 9.6E-09 2.1E-13 97.4 1.2 241 96-358 71-322 (414)
39 PF13855 LRR_8: Leucine rich r 98.6 1.5E-08 3.2E-13 68.3 1.7 60 292-353 1-61 (61)
40 PF13855 LRR_8: Leucine rich r 98.5 4.9E-08 1.1E-12 65.7 2.7 55 102-157 5-60 (61)
41 KOG1859|consensus 98.5 1.4E-09 3E-14 104.0 -7.0 102 231-355 192-293 (1096)
42 KOG1859|consensus 98.5 5.3E-09 1.2E-13 100.0 -4.4 152 48-205 104-267 (1096)
43 PLN03150 hypothetical protein; 98.4 4.7E-07 1E-11 90.1 7.5 91 122-213 419-512 (623)
44 KOG4658|consensus 98.4 4.1E-07 8.9E-12 92.8 7.2 104 98-204 524-630 (889)
45 KOG2982|consensus 98.4 5.2E-08 1.1E-12 84.1 0.3 41 288-328 220-262 (418)
46 KOG4579|consensus 98.4 1E-07 2.2E-12 73.0 0.6 101 231-353 32-135 (177)
47 PLN03150 hypothetical protein; 98.3 1.4E-06 3E-11 86.8 7.6 105 147-262 419-528 (623)
48 KOG2120|consensus 98.3 1.8E-08 3.8E-13 87.0 -5.3 170 148-352 187-374 (419)
49 KOG2982|consensus 98.3 4.7E-07 1E-11 78.3 2.9 201 32-262 49-262 (418)
50 KOG4579|consensus 98.2 7E-08 1.5E-12 73.9 -2.7 136 170-361 28-166 (177)
51 PF12799 LRR_4: Leucine Rich r 98.1 1.9E-06 4.1E-11 53.3 2.4 37 294-330 3-39 (44)
52 COG5238 RNA1 Ran GTPase-activa 98.1 3.4E-07 7.3E-12 78.2 -2.5 224 118-356 27-287 (388)
53 KOG2120|consensus 98.0 1.6E-07 3.5E-12 81.2 -4.6 173 21-202 176-373 (419)
54 PF12799 LRR_4: Leucine Rich r 97.9 1E-05 2.2E-10 50.0 3.4 38 170-207 2-39 (44)
55 KOG3665|consensus 97.9 5.3E-06 1.1E-10 82.7 2.9 137 25-182 119-263 (699)
56 PRK15386 type III secretion pr 97.9 4.7E-05 1E-09 70.4 8.4 71 119-202 50-122 (426)
57 KOG1644|consensus 97.9 2.4E-05 5.2E-10 64.2 5.2 98 102-201 46-149 (233)
58 KOG1644|consensus 97.7 6.7E-05 1.5E-09 61.7 5.9 127 102-238 23-152 (233)
59 KOG3665|consensus 97.6 2.2E-05 4.8E-10 78.4 1.4 106 98-205 123-233 (699)
60 PRK15386 type III secretion pr 97.5 0.00049 1.1E-08 63.8 8.2 48 28-80 52-99 (426)
61 KOG4308|consensus 97.4 7.9E-07 1.7E-11 84.8 -10.9 159 30-205 89-275 (478)
62 KOG2739|consensus 97.2 0.00043 9.4E-09 59.3 3.9 56 146-201 91-152 (260)
63 KOG2123|consensus 96.8 4.1E-05 8.9E-10 66.0 -5.0 75 247-325 17-98 (388)
64 KOG2739|consensus 96.8 0.00091 2E-08 57.4 2.8 69 90-159 58-129 (260)
65 KOG2123|consensus 96.7 7.4E-05 1.6E-09 64.4 -4.4 98 96-198 18-123 (388)
66 KOG4341|consensus 96.5 0.0002 4.3E-09 65.2 -3.5 40 28-67 138-179 (483)
67 KOG4242|consensus 96.4 0.012 2.5E-07 54.9 7.3 279 52-357 164-484 (553)
68 KOG4308|consensus 96.2 0.00014 3E-09 69.7 -6.7 205 123-367 89-316 (478)
69 PF00560 LRR_1: Leucine Rich R 95.9 0.0024 5.3E-08 32.8 0.4 19 316-334 1-19 (22)
70 PF13504 LRR_7: Leucine rich r 95.8 0.0066 1.4E-07 28.9 1.4 17 315-331 1-17 (17)
71 PF00560 LRR_1: Leucine Rich R 94.5 0.014 3E-07 29.9 0.4 19 250-268 1-19 (22)
72 PF13306 LRR_5: Leucine rich r 94.2 0.16 3.4E-06 39.3 6.1 81 117-201 8-90 (129)
73 smart00368 LRR_RI Leucine rich 94.0 0.052 1.1E-06 29.7 2.2 26 53-78 2-27 (28)
74 KOG0473|consensus 93.8 0.0021 4.5E-08 54.3 -5.4 87 117-205 38-124 (326)
75 PF13306 LRR_5: Leucine rich r 93.7 0.22 4.7E-06 38.5 6.2 97 98-201 13-112 (129)
76 smart00370 LRR Leucine-rich re 93.2 0.081 1.7E-06 28.2 2.1 21 314-334 1-21 (26)
77 smart00369 LRR_TYP Leucine-ric 93.2 0.081 1.7E-06 28.2 2.1 21 314-334 1-21 (26)
78 PF13516 LRR_6: Leucine Rich r 92.8 0.065 1.4E-06 27.9 1.3 22 52-73 1-22 (24)
79 KOG1947|consensus 91.8 0.024 5.1E-07 54.9 -2.2 88 117-204 210-307 (482)
80 KOG0473|consensus 90.0 0.0092 2E-07 50.5 -5.8 90 90-182 35-124 (326)
81 smart00364 LRR_BAC Leucine-ric 88.8 0.26 5.7E-06 26.2 1.2 18 315-332 2-19 (26)
82 smart00368 LRR_RI Leucine rich 88.2 0.39 8.5E-06 26.1 1.7 23 341-363 2-24 (28)
83 KOG4341|consensus 86.6 0.28 6.1E-06 45.4 0.8 84 96-180 345-437 (483)
84 smart00365 LRR_SD22 Leucine-ri 83.2 0.94 2E-05 24.2 1.6 17 314-330 1-17 (26)
85 KOG1947|consensus 75.9 0.68 1.5E-05 44.7 -0.7 81 119-199 241-328 (482)
86 smart00367 LRR_CC Leucine-rich 75.4 2.4 5.1E-05 22.4 1.7 21 52-72 1-22 (26)
87 KOG3763|consensus 73.8 1.1 2.4E-05 43.1 0.1 37 27-63 217-254 (585)
88 KOG3864|consensus 73.6 0.7 1.5E-05 38.6 -1.0 35 120-155 150-185 (221)
89 KOG4242|consensus 71.1 28 0.00061 33.3 8.5 49 290-338 438-493 (553)
90 KOG3763|consensus 70.7 3.9 8.4E-05 39.5 2.9 67 289-357 215-286 (585)
91 KOG3864|consensus 66.9 1.3 2.7E-05 37.1 -0.9 95 106-201 86-185 (221)
No 1
>KOG0472|consensus
Probab=99.95 E-value=4.5e-30 Score=225.47 Aligned_cols=326 Identities=29% Similarity=0.452 Sum_probs=240.9
Q ss_pred cCCceeeccCCcccCcCcccccccccccEEEcccccccCchhHHHHhhccccc---cCCccccCCCCCCC----Cccchh
Q psy9862 29 KNPELELADKGLSSFEELPGLMNMLYITRITLSHNKLKGEIIVQVIKGLSNSK---YNYIPILHVTSLPI----LPFLFL 101 (378)
Q Consensus 29 ~l~~L~l~~~~~~~~~~~~~l~~~~~L~~L~ls~~~l~~~~~~~~~~~l~~l~---~~~l~~l~l~~~~~----~~~l~~ 101 (378)
++..|+.+.|.+..+. +++..+..+..++..+|++.. .|+++..+. -..+...++..+|. ++.++
T Consensus 115 ~l~~l~~s~n~~~el~--~~i~~~~~l~dl~~~~N~i~s-----lp~~~~~~~~l~~l~~~~n~l~~l~~~~i~m~~L~- 186 (565)
T KOG0472|consen 115 SLVKLDCSSNELKELP--DSIGRLLDLEDLDATNNQISS-----LPEDMVNLSKLSKLDLEGNKLKALPENHIAMKRLK- 186 (565)
T ss_pred hhhhhhccccceeecC--chHHHHhhhhhhhcccccccc-----CchHHHHHHHHHHhhccccchhhCCHHHHHHHHHH-
Confidence 3667777777776543 667777777777777777762 332222222 00133334444442 66777
Q ss_pred ccccCCcccccCCCCCCCCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCCCccCCcccc-CCCCCcEEecCCCC
Q psy9862 102 QFPCRMNRLSSLPRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAEIG-NLKNLQILVLREND 180 (378)
Q Consensus 102 ~l~l~~~~l~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~~l~~~l~-~l~~L~~L~l~~n~ 180 (378)
++++..|.+..+|..++++..|..|++..|++.. +| .|.++..|++++++.|++..+|.+.. .+.++..||+..|+
T Consensus 187 ~ld~~~N~L~tlP~~lg~l~~L~~LyL~~Nki~~--lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNk 263 (565)
T KOG0472|consen 187 HLDCNSNLLETLPPELGGLESLELLYLRRNKIRF--LP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNK 263 (565)
T ss_pred hcccchhhhhcCChhhcchhhhHHHHhhhccccc--CC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccc
Confidence 8888888888888888888888888888888863 34 67778888888888888877777654 77788888888888
Q ss_pred CccCChhhcCCCCCcEEeccCCcCcccCcccccccccccccccccCCC--------------------------------
Q psy9862 181 LIEIPKELGNLTRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFN-------------------------------- 228 (378)
Q Consensus 181 ~~~l~~~l~~l~~L~~L~l~~~~l~~~~~~~~~l~~l~~l~~~~~~~~-------------------------------- 228 (378)
++++|+.+.-+.+|..||+++|.++++|..++++ .+..+ .+..+
T Consensus 264 lke~Pde~clLrsL~rLDlSNN~is~Lp~sLgnl-hL~~L---~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~ 339 (565)
T KOG0472|consen 264 LKEVPDEICLLRSLERLDLSNNDISSLPYSLGNL-HLKFL---ALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQ 339 (565)
T ss_pred cccCchHHHHhhhhhhhcccCCccccCCcccccc-eeeeh---hhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCC
Confidence 8888888888888888888888888777766655 22111 11000
Q ss_pred ---------------------------------------------------Cc------------------------eec
Q psy9862 229 ---------------------------------------------------PW------------------------LVL 233 (378)
Q Consensus 229 ---------------------------------------------------~~------------------------l~l 233 (378)
+. +.+
T Consensus 340 se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~l~l 419 (565)
T KOG0472|consen 340 SEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELVTDLVL 419 (565)
T ss_pred CcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHHHHHHh
Confidence 00 444
Q ss_pred cCCccccccccccCCcCcceeecccccCCcCCCCCCCcccccccccccccCCCCccC------ccchhhhhccCcccccc
Q psy9862 234 RENDLIEIPKELGNLSRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWVTP------IADQLQLVLRENDLIEI 307 (378)
Q Consensus 234 ~~~~l~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~~~l~~~~~l~~l~l~~~~~~~~------~~~l~~L~l~~n~l~~l 307 (378)
+.|.++.+|..+..+++|..|++++|-+..+|..++.+ ..|+.+++++|.|... +..++.+-.++|+++++
T Consensus 420 snn~isfv~~~l~~l~kLt~L~L~NN~Ln~LP~e~~~l---v~Lq~LnlS~NrFr~lP~~~y~lq~lEtllas~nqi~~v 496 (565)
T KOG0472|consen 420 SNNKISFVPLELSQLQKLTFLDLSNNLLNDLPEEMGSL---VRLQTLNLSFNRFRMLPECLYELQTLETLLASNNQIGSV 496 (565)
T ss_pred hcCccccchHHHHhhhcceeeecccchhhhcchhhhhh---hhhheecccccccccchHHHhhHHHHHHHHhcccccccc
Confidence 55555556666788888899999999888888877655 5588889999987542 22345667778999999
Q ss_pred chh-hcCCCCCCEEEeecCCCCcCChhhccCCCccCcceeeccCCCCCccchHHhhhhhHHHHHHHhhh
Q psy9862 308 PKE-LGNLSRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWVTPIADQLQVGISHVLDYIRSE 375 (378)
Q Consensus 308 ~~~-l~~~~~L~~L~l~~n~l~~~~~~~~~l~~~~~l~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~ 375 (378)
++. +..|.+|+.||+.+|.+..+|+.++++. +++.++++||+|..+..+.+..|+..+++|++.+
T Consensus 497 d~~~l~nm~nL~tLDL~nNdlq~IPp~Lgnmt---nL~hLeL~gNpfr~Pr~~iLmkgT~aiL~ylrdr 562 (565)
T KOG0472|consen 497 DPSGLKNMRNLTTLDLQNNDLQQIPPILGNMT---NLRHLELDGNPFRQPRHQILMKGTAAILSYLRDR 562 (565)
T ss_pred ChHHhhhhhhcceeccCCCchhhCChhhcccc---ceeEEEecCCccCCCHHHHhccChHHHHHHhccc
Confidence 877 8999999999999999999999999987 9999999999999888888999999999999875
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.95 E-value=1.7e-27 Score=248.83 Aligned_cols=321 Identities=29% Similarity=0.416 Sum_probs=225.2
Q ss_pred ccCCceeeccCCcccCcCcccccccccccEEEcccccccCchhHHHHhhccccccCCccccCCC------CCC--CCccc
Q psy9862 28 IKNPELELADKGLSSFEELPGLMNMLYITRITLSHNKLKGEIIVQVIKGLSNSKYNYIPILHVT------SLP--ILPFL 99 (378)
Q Consensus 28 ~~l~~L~l~~~~~~~~~~~~~l~~~~~L~~L~ls~~~l~~~~~~~~~~~l~~l~~~~l~~l~l~------~~~--~~~~l 99 (378)
.+++.|+++++.+++.. .+.+..+++|+.|++++|.+.+.++..+...+.+ |+.++++ .+| .++++
T Consensus 69 ~~v~~L~L~~~~i~~~~-~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~-----L~~L~Ls~n~l~~~~p~~~l~~L 142 (968)
T PLN00113 69 SRVVSIDLSGKNISGKI-SSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSS-----LRYLNLSNNNFTGSIPRGSIPNL 142 (968)
T ss_pred CcEEEEEecCCCccccC-ChHHhCCCCCCEEECCCCccCCcCChHHhccCCC-----CCEEECcCCccccccCccccCCC
Confidence 46889999999888633 2457789999999999999987444444333333 4455443 223 37788
Q ss_pred hhccccCCcccc-cCCCCCCCCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCCCc-cCCccccCCCCCcEEecC
Q psy9862 100 FLQFPCRMNRLS-SLPRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFE-VLPAEIGNLKNLQILVLR 177 (378)
Q Consensus 100 ~~~l~l~~~~l~-~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~-~l~~~l~~l~~L~~L~l~ 177 (378)
+ ++++++|.++ .+|..+..+++|++|++++|.+.+ ..|..+..+++|++|++++|.+. .+|..++.+++|++|+++
T Consensus 143 ~-~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~ 220 (968)
T PLN00113 143 E-TLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVG-KIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLG 220 (968)
T ss_pred C-EEECcCCcccccCChHHhcCCCCCEEECccCcccc-cCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECc
Confidence 8 9999999887 577778889999999999998876 56777888899999999998876 678888888999999999
Q ss_pred CCCCc-cCChhhcCCCCCcEEeccCCcCc-ccCccccccccccccccc-------------ccCCCCceeccCCccc-cc
Q psy9862 178 ENDLI-EIPKELGNLTRLRELHIQANRLT-VLPPEIGNLDLASHKSVL-------------KMDFNPWLVLRENDLI-EI 241 (378)
Q Consensus 178 ~n~~~-~l~~~l~~l~~L~~L~l~~~~l~-~~~~~~~~l~~l~~l~~~-------------~~~~~~~l~l~~~~l~-~l 241 (378)
+|.+. .+|..+..+++|++|++++|.++ .+|..+..++.++.+... .+..++.+++++|.+. .+
T Consensus 221 ~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~ 300 (968)
T PLN00113 221 YNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEI 300 (968)
T ss_pred CCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCC
Confidence 98887 56888888899999999998887 567667666665543221 1233444666666654 45
Q ss_pred cccccCCcCcceeecccccCC-cCCCCCCCcccccccccccccCCCCccC-------ccchhhhhccCcccc-ccchhhc
Q psy9862 242 PKELGNLSRLRELHIQANRLT-VLPPEIGNLDLASHKSVLKMDFNPWVTP-------IADQLQLVLRENDLI-EIPKELG 312 (378)
Q Consensus 242 ~~~l~~~~~L~~L~l~~n~l~-~~~~~~~~l~~~~~l~~l~l~~~~~~~~-------~~~l~~L~l~~n~l~-~l~~~l~ 312 (378)
|..+..+++|+.|++++|.+. .+|..+ ..+++|+.+++++|.+.+. .++++.|++++|.++ .+|.++.
T Consensus 301 p~~~~~l~~L~~L~l~~n~~~~~~~~~~---~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~ 377 (968)
T PLN00113 301 PELVIQLQNLEILHLFSNNFTGKIPVAL---TSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLC 377 (968)
T ss_pred ChhHcCCCCCcEEECCCCccCCcCChhH---hcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHh
Confidence 555566666666666666665 333333 2335566666666665432 334566777777665 5666666
Q ss_pred CCCCCCEEEeecCCCC-cCChhhccCCCccCcceeeccCCCCCccchHHhh
Q psy9862 313 NLSRLRELHIQANRLT-VLPPEIGNLDLASHKSVLKMDFNPWVTPIADQLQ 362 (378)
Q Consensus 313 ~~~~L~~L~l~~n~l~-~~~~~~~~l~~~~~l~~l~l~~n~~~~~~~~~~~ 362 (378)
.+++|+.|++++|++. .+|..++.++ +|+.+++++|.+++.+|..+.
T Consensus 378 ~~~~L~~L~l~~n~l~~~~p~~~~~~~---~L~~L~L~~n~l~~~~p~~~~ 425 (968)
T PLN00113 378 SSGNLFKLILFSNSLEGEIPKSLGACR---SLRRVRLQDNSFSGELPSEFT 425 (968)
T ss_pred CcCCCCEEECcCCEecccCCHHHhCCC---CCCEEECcCCEeeeECChhHh
Confidence 6677777777777666 5555555444 888888888888888777654
No 3
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.94 E-value=1.1e-26 Score=242.96 Aligned_cols=323 Identities=26% Similarity=0.330 Sum_probs=202.2
Q ss_pred ccCCceeeccCCcccCcCcc-cccccccccEEEcccccccCchhHHHHhhccccccCCccccCCCC------C----CCC
Q psy9862 28 IKNPELELADKGLSSFEELP-GLMNMLYITRITLSHNKLKGEIIVQVIKGLSNSKYNYIPILHVTS------L----PIL 96 (378)
Q Consensus 28 ~~l~~L~l~~~~~~~~~~~~-~l~~~~~L~~L~ls~~~l~~~~~~~~~~~l~~l~~~~l~~l~l~~------~----~~~ 96 (378)
.+++.|++++|.+.+ .+| .+.++++|+.|++++|.+.+ .+|..+.+++ + |+.++++. + ..+
T Consensus 188 ~~L~~L~L~~n~l~~--~~p~~l~~l~~L~~L~L~~n~l~~----~~p~~l~~l~-~-L~~L~L~~n~l~~~~p~~l~~l 259 (968)
T PLN00113 188 TSLEFLTLASNQLVG--QIPRELGQMKSLKWIYLGYNNLSG----EIPYEIGGLT-S-LNHLDLVYNNLTGPIPSSLGNL 259 (968)
T ss_pred cCCCeeeccCCCCcC--cCChHHcCcCCccEEECcCCccCC----cCChhHhcCC-C-CCEEECcCceeccccChhHhCC
Confidence 457888888888765 223 56678888888888888776 4555555554 4 55554431 1 226
Q ss_pred ccchhccccCCcccc-cCCCCCCCCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCCCc-cCCccccCCCCCcEE
Q psy9862 97 PFLFLQFPCRMNRLS-SLPRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFE-VLPAEIGNLKNLQIL 174 (378)
Q Consensus 97 ~~l~~~l~l~~~~l~-~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~-~l~~~l~~l~~L~~L 174 (378)
++++ .+++++|.+. .+|..+..+++|++|++++|.+.+ .+|..+..+++|++|++++|.+. .+|..+..+++|+.|
T Consensus 260 ~~L~-~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~-~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L 337 (968)
T PLN00113 260 KNLQ-YLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSG-EIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVL 337 (968)
T ss_pred CCCC-EEECcCCeeeccCchhHhhccCcCEEECcCCeecc-CCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEE
Confidence 6677 7777777776 456667777777777777777765 45666667777777777777765 456666677777777
Q ss_pred ecCCCCCc-cCChhhcCCCCCcEEeccCCcCc-ccCcccccccccccccc-------------cccCCCCceeccCCccc
Q psy9862 175 VLRENDLI-EIPKELGNLTRLRELHIQANRLT-VLPPEIGNLDLASHKSV-------------LKMDFNPWLVLRENDLI 239 (378)
Q Consensus 175 ~l~~n~~~-~l~~~l~~l~~L~~L~l~~~~l~-~~~~~~~~l~~l~~l~~-------------~~~~~~~~l~l~~~~l~ 239 (378)
++++|.+. .+|..+..+++|+.|++++|.++ .+|..+..+..++.+.. ..+..++.+++.+|.+.
T Consensus 338 ~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~ 417 (968)
T PLN00113 338 QLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFS 417 (968)
T ss_pred ECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEee
Confidence 77777766 45666667777777777777665 44444433322222111 12233344555555554
Q ss_pred -cccccccCCcCcceeecccccCC-cCCCCCCCc--------------------ccccccccccccCCCCccC-------
Q psy9862 240 -EIPKELGNLSRLRELHIQANRLT-VLPPEIGNL--------------------DLASHKSVLKMDFNPWVTP------- 290 (378)
Q Consensus 240 -~l~~~l~~~~~L~~L~l~~n~l~-~~~~~~~~l--------------------~~~~~l~~l~l~~~~~~~~------- 290 (378)
.+|..+..+++|+.+++++|.+. .++..+..+ ....+|+.+++++|.+.+.
T Consensus 418 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~ 497 (968)
T PLN00113 418 GELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGS 497 (968)
T ss_pred eECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccccccceEEECcCCccCCccChhhhh
Confidence 34444445555555555555444 121111111 1124566677777766543
Q ss_pred ccchhhhhccCcccc-ccchhhcCCCCCCEEEeecCCCC-cCChhhccCCCccCcceeeccCCCCCccchHHhhh
Q psy9862 291 IADQLQLVLRENDLI-EIPKELGNLSRLRELHIQANRLT-VLPPEIGNLDLASHKSVLKMDFNPWVTPIADQLQV 363 (378)
Q Consensus 291 ~~~l~~L~l~~n~l~-~l~~~l~~~~~L~~L~l~~n~l~-~~~~~~~~l~~~~~l~~l~l~~n~~~~~~~~~~~~ 363 (378)
.+.++.|++++|.+. .+|..+..+++|++|++++|.++ .+|..+..+ ++|+.+++++|.+++.+|+.+..
T Consensus 498 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~l~~ 569 (968)
T PLN00113 498 LSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEM---PVLSQLDLSQNQLSGEIPKNLGN 569 (968)
T ss_pred hhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCc---ccCCEEECCCCcccccCChhHhc
Confidence 345667888888876 67777888888888888888888 555555544 48888899999988888877653
No 4
>KOG4194|consensus
Probab=99.94 E-value=5e-28 Score=221.65 Aligned_cols=344 Identities=21% Similarity=0.271 Sum_probs=248.9
Q ss_pred HHhhhhhccCCceeeccCCcccCcCcccccccccccEEEcccccccCchhHHHH--hhccccccCCccccCCCCCCC---
Q psy9862 21 VLDESKEIKNPELELADKGLSSFEELPGLMNMLYITRITLSHNKLKGEIIVQVI--KGLSNSKYNYIPILHVTSLPI--- 95 (378)
Q Consensus 21 ~~~~~~~~~l~~L~l~~~~~~~~~~~~~l~~~~~L~~L~ls~~~l~~~~~~~~~--~~l~~l~~~~l~~l~l~~~~~--- 95 (378)
.+...-+...+.||+++|.++.+. +..+.++++|+.+++.+|.++. +++-.- ..+.++. |+.+.|+++..
T Consensus 71 ~l~g~lp~~t~~LdlsnNkl~~id-~~~f~nl~nLq~v~l~~N~Lt~-IP~f~~~sghl~~L~---L~~N~I~sv~se~L 145 (873)
T KOG4194|consen 71 RLKGFLPSQTQTLDLSNNKLSHID-FEFFYNLPNLQEVNLNKNELTR-IPRFGHESGHLEKLD---LRHNLISSVTSEEL 145 (873)
T ss_pred ccCCcCccceeeeeccccccccCc-HHHHhcCCcceeeeeccchhhh-cccccccccceeEEe---eeccccccccHHHH
Confidence 344455566788999999999876 3567799999999999999873 222211 1244555 77777776654
Q ss_pred --CccchhccccCCcccccCCCC-CCCCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCCCccCCc-cccCCCCC
Q psy9862 96 --LPFLFLQFPCRMNRLSSLPRG-FGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPA-EIGNLKNL 171 (378)
Q Consensus 96 --~~~l~~~l~l~~~~l~~~~~~-~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~~l~~-~l~~l~~L 171 (378)
++.++ .+|++.|.|+.++.. |..-.++++|++++|.|++.. ...|.++.+|..|.+++|.++.+|. .|++++.|
T Consensus 146 ~~l~alr-slDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~-~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L 223 (873)
T KOG4194|consen 146 SALPALR-SLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLE-TGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKL 223 (873)
T ss_pred HhHhhhh-hhhhhhchhhcccCCCCCCCCCceEEeeccccccccc-cccccccchheeeecccCcccccCHHHhhhcchh
Confidence 89999 999999999988877 888889999999999999854 5678999999999999999998875 57889999
Q ss_pred cEEecCCCCCccC-ChhhcCCCCCcEEeccCCcCcccCcc-ccccccccccc-------------ccccCCCCceeccCC
Q psy9862 172 QILVLRENDLIEI-PKELGNLTRLRELHIQANRLTVLPPE-IGNLDLASHKS-------------VLKMDFNPWLVLREN 236 (378)
Q Consensus 172 ~~L~l~~n~~~~l-~~~l~~l~~L~~L~l~~~~l~~~~~~-~~~l~~l~~l~-------------~~~~~~~~~l~l~~~ 236 (378)
+.|++.+|++..+ --.|..+++|+.|.+..|++..+.++ +-.+.+++.+. .+.+..++.|+++.|
T Consensus 224 ~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~N 303 (873)
T KOG4194|consen 224 ESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYN 303 (873)
T ss_pred hhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchh
Confidence 9999999998855 33577777777777777777655442 22222222211 223333445778888
Q ss_pred ccccc-cccccCCcCcceeecccccCCcCCCCCCCcccccccccccccCCCCcc-------CccchhhhhccCcccc---
Q psy9862 237 DLIEI-PKELGNLSRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWVT-------PIADQLQLVLRENDLI--- 305 (378)
Q Consensus 237 ~l~~l-~~~l~~~~~L~~L~l~~n~l~~~~~~~~~l~~~~~l~~l~l~~~~~~~-------~~~~l~~L~l~~n~l~--- 305 (378)
.+..+ +..|..++.|++|+++.|+++.+++.. +..++.|+.|.+++|.+.. ...++.+||++.|.++
T Consensus 304 aI~rih~d~WsftqkL~~LdLs~N~i~~l~~~s--f~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~I 381 (873)
T KOG4194|consen 304 AIQRIHIDSWSFTQKLKELDLSSNRITRLDEGS--FRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCI 381 (873)
T ss_pred hhheeecchhhhcccceeEeccccccccCChhH--HHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEE
Confidence 87755 345778888888888888888777643 4455777778888876532 4556778888888876
Q ss_pred -ccchhhcCCCCCCEEEeecCCCCcCChhhccCCCccCcceeeccCCCCCccchHH-----------------hhhhhHH
Q psy9862 306 -EIPKELGNLSRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWVTPIADQ-----------------LQVGISH 367 (378)
Q Consensus 306 -~l~~~l~~~~~L~~L~l~~n~l~~~~~~~~~l~~~~~l~~l~l~~n~~~~~~~~~-----------------~~~~~~~ 367 (378)
.-..++.++++|+.|++.+|+|+.+|. .++..++.|+.||+.+|.+..-=|+. |.|+++|
T Consensus 382 EDaa~~f~gl~~LrkL~l~gNqlk~I~k--rAfsgl~~LE~LdL~~NaiaSIq~nAFe~m~Lk~Lv~nSssflCDCql~W 459 (873)
T KOG4194|consen 382 EDAAVAFNGLPSLRKLRLTGNQLKSIPK--RAFSGLEALEHLDLGDNAIASIQPNAFEPMELKELVMNSSSFLCDCQLKW 459 (873)
T ss_pred ecchhhhccchhhhheeecCceeeecch--hhhccCcccceecCCCCcceeecccccccchhhhhhhcccceEEeccHHH
Confidence 223446778888888888888888776 34666678888888888875433333 3456777
Q ss_pred HHHHHhhh
Q psy9862 368 VLDYIRSE 375 (378)
Q Consensus 368 ~~~~~~~~ 375 (378)
+..|+-..
T Consensus 460 l~qWl~~~ 467 (873)
T KOG4194|consen 460 LAQWLYRR 467 (873)
T ss_pred HHHHHHhc
Confidence 77776543
No 5
>KOG0472|consensus
Probab=99.94 E-value=1.6e-29 Score=222.14 Aligned_cols=284 Identities=33% Similarity=0.488 Sum_probs=245.0
Q ss_pred CCceeeccCCcccCcCcccccccccccEEEcccccccCchhHHHHhhccccccCCccccCCCCCCCCccchhccccCCcc
Q psy9862 30 NPELELADKGLSSFEELPGLMNMLYITRITLSHNKLKGEIIVQVIKGLSNSKYNYIPILHVTSLPILPFLFLQFPCRMNR 109 (378)
Q Consensus 30 l~~L~l~~~~~~~~~~~~~l~~~~~L~~L~ls~~~l~~~~~~~~~~~l~~l~~~~l~~l~l~~~~~~~~l~~~l~l~~~~ 109 (378)
++.+.++.|.+..+. +++.++..+++|++.+|+++ ++|+++..+. .++ .++.++|+
T Consensus 47 l~~lils~N~l~~l~--~dl~nL~~l~vl~~~~n~l~-----~lp~aig~l~----------------~l~-~l~vs~n~ 102 (565)
T KOG0472|consen 47 LQKLILSHNDLEVLR--EDLKNLACLTVLNVHDNKLS-----QLPAAIGELE----------------ALK-SLNVSHNK 102 (565)
T ss_pred hhhhhhccCchhhcc--HhhhcccceeEEEeccchhh-----hCCHHHHHHH----------------HHH-Hhhcccch
Confidence 456889999998754 88889999999999999887 4677776666 566 78888999
Q ss_pred cccCCCCCCCCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCCCccCCccccCCCCCcEEecCCCCCccCChhhc
Q psy9862 110 LSSLPRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLKNLQILVLRENDLIEIPKELG 189 (378)
Q Consensus 110 l~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~~l~~~l~~l~~L~~L~l~~n~~~~l~~~l~ 189 (378)
+..+|..+.....+..+++++|.+. .+++.+..+..+..++..+|+++++|..+..+.++..+++.+|.+.++|+..-
T Consensus 103 ls~lp~~i~s~~~l~~l~~s~n~~~--el~~~i~~~~~l~dl~~~~N~i~slp~~~~~~~~l~~l~~~~n~l~~l~~~~i 180 (565)
T KOG0472|consen 103 LSELPEQIGSLISLVKLDCSSNELK--ELPDSIGRLLDLEDLDATNNQISSLPEDMVNLSKLSKLDLEGNKLKALPENHI 180 (565)
T ss_pred HhhccHHHhhhhhhhhhhcccccee--ecCchHHHHhhhhhhhccccccccCchHHHHHHHHHHhhccccchhhCCHHHH
Confidence 9999988888899999999999887 45777888888999999999999999988888899999999999998888877
Q ss_pred CCCCCcEEeccCCcCcccCcccccccccccccccccCCCCceeccCCccccccccccCCcCcceeecccccCCcCCCCCC
Q psy9862 190 NLTRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWLVLRENDLIEIPKELGNLSRLRELHIQANRLTVLPPEIG 269 (378)
Q Consensus 190 ~l~~L~~L~l~~~~l~~~~~~~~~l~~l~~l~~~~~~~~~~l~l~~~~l~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~~ 269 (378)
+|+.|+++|...|.++.+|+.++.+.++.. +.+..|++..+| .|.+|..|++++++.|.+..+|...
T Consensus 181 ~m~~L~~ld~~~N~L~tlP~~lg~l~~L~~-----------LyL~~Nki~~lP-ef~gcs~L~Elh~g~N~i~~lpae~- 247 (565)
T KOG0472|consen 181 AMKRLKHLDCNSNLLETLPPELGGLESLEL-----------LYLRRNKIRFLP-EFPGCSLLKELHVGENQIEMLPAEH- 247 (565)
T ss_pred HHHHHHhcccchhhhhcCChhhcchhhhHH-----------HHhhhcccccCC-CCCccHHHHHHHhcccHHHhhHHHH-
Confidence 789999999999999999988887776654 788889998888 6888999999999999888777654
Q ss_pred CcccccccccccccCCCCccCccchhhhhccCccccccchhhcCCCCCCEEEeecCCCCcCChhhccCCCccCcceeecc
Q psy9862 270 NLDLASHKSVLKMDFNPWVTPIADQLQLVLRENDLIEIPKELGNLSRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMD 349 (378)
Q Consensus 270 ~l~~~~~l~~l~l~~~~~~~~~~~l~~L~l~~n~l~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~~~l~~~~~l~~l~l~ 349 (378)
....+++..||+..|+++++|..+--+.+|.+||+++|.|+++|..++++ +++.+-+.
T Consensus 248 ------------------~~~L~~l~vLDLRdNklke~Pde~clLrsL~rLDlSNN~is~Lp~sLgnl----hL~~L~le 305 (565)
T KOG0472|consen 248 ------------------LKHLNSLLVLDLRDNKLKEVPDEICLLRSLERLDLSNNDISSLPYSLGNL----HLKFLALE 305 (565)
T ss_pred ------------------hcccccceeeeccccccccCchHHHHhhhhhhhcccCCccccCCcccccc----eeeehhhc
Confidence 22456778899999999999999989999999999999999999999887 88999999
Q ss_pred CCCCCccchHHhhhhhHHHHHHHhh
Q psy9862 350 FNPWVTPIADQLQVGISHVLDYIRS 374 (378)
Q Consensus 350 ~n~~~~~~~~~~~~~~~~~~~~~~~ 374 (378)
|||+-.---+.+.+|+..++.|+|+
T Consensus 306 GNPlrTiRr~ii~~gT~~vLKyLrs 330 (565)
T KOG0472|consen 306 GNPLRTIRREIISKGTQEVLKYLRS 330 (565)
T ss_pred CCchHHHHHHHHcccHHHHHHHHHH
Confidence 9999877778889999999999998
No 6
>KOG0444|consensus
Probab=99.93 E-value=2.1e-27 Score=219.38 Aligned_cols=285 Identities=27% Similarity=0.388 Sum_probs=178.5
Q ss_pred cCCceeeccCCcccCcCcccccccccccEEEcccccccCchhHHHHhhcccccc---CCccccCCCCCCC-----Cccch
Q psy9862 29 KNPELELADKGLSSFEELPGLMNMLYITRITLSHNKLKGEIIVQVIKGLSNSKY---NYIPILHVTSLPI-----LPFLF 100 (378)
Q Consensus 29 ~l~~L~l~~~~~~~~~~~~~l~~~~~L~~L~ls~~~l~~~~~~~~~~~l~~l~~---~~l~~l~l~~~~~-----~~~l~ 100 (378)
+++.+++..|.+..-+.-+++..+..|+.||||+|++. ++|..+..-+. -+|..++|..+|. +..+-
T Consensus 79 ~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-----EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLL 153 (1255)
T KOG0444|consen 79 RLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-----EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLL 153 (1255)
T ss_pred hhHHHhhhccccccCCCCchhcccccceeeecchhhhh-----hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHh
Confidence 46677777777775444357788888899999998887 34544444331 0133444555554 33333
Q ss_pred hccccCCcccccCCCCCCCCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCCCc--cCCccccCCCCCcEEecCC
Q psy9862 101 LQFPCRMNRLSSLPRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFE--VLPAEIGNLKNLQILVLRE 178 (378)
Q Consensus 101 ~~l~l~~~~l~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~--~l~~~l~~l~~L~~L~l~~ 178 (378)
.++++.|.+..+|+.+..+..|++|++++|++....+ ..+..+++|+.|.+++++-+ .+|..+..+.+|..+|+++
T Consensus 154 -fLDLS~NrLe~LPPQ~RRL~~LqtL~Ls~NPL~hfQL-rQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~ 231 (1255)
T KOG0444|consen 154 -FLDLSNNRLEMLPPQIRRLSMLQTLKLSNNPLNHFQL-RQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSE 231 (1255)
T ss_pred -hhccccchhhhcCHHHHHHhhhhhhhcCCChhhHHHH-hcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccc
Confidence 4555666655555555555566666666665543221 22334445555555555543 4566666666666666666
Q ss_pred CCCccCChhhcCCCCCcEEeccCCcCcccCcccccccccccccccccCCCCceeccCCccccccccccCCcCcceeeccc
Q psy9862 179 NDLIEIPKELGNLTRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWLVLRENDLIEIPKELGNLSRLRELHIQA 258 (378)
Q Consensus 179 n~~~~l~~~l~~l~~L~~L~l~~~~l~~~~~~~~~l~~l~~l~~~~~~~~~~l~l~~~~l~~l~~~l~~~~~L~~L~l~~ 258 (378)
|.+..+|+.+..+++|+.|++++|.++.+.-..+....++. ++++.|+++.+|..+.+++.|+.|++.+
T Consensus 232 N~Lp~vPecly~l~~LrrLNLS~N~iteL~~~~~~W~~lEt-----------LNlSrNQLt~LP~avcKL~kL~kLy~n~ 300 (1255)
T KOG0444|consen 232 NNLPIVPECLYKLRNLRRLNLSGNKITELNMTEGEWENLET-----------LNLSRNQLTVLPDAVCKLTKLTKLYANN 300 (1255)
T ss_pred cCCCcchHHHhhhhhhheeccCcCceeeeeccHHHHhhhhh-----------hccccchhccchHHHhhhHHHHHHHhcc
Confidence 66666666666666666666666666655444444433333 5666666666666666666666666666
Q ss_pred ccCC--cCCCCCCCcccccccccccccCCCCccCccchhhhhccCccccccchhhcCCCCCCEEEeecCCCCcCChhhcc
Q psy9862 259 NRLT--VLPPEIGNLDLASHKSVLKMDFNPWVTPIADQLQLVLRENDLIEIPKELGNLSRLRELHIQANRLTVLPPEIGN 336 (378)
Q Consensus 259 n~l~--~~~~~~~~l~~~~~l~~l~l~~~~~~~~~~~l~~L~l~~n~l~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~~~ 336 (378)
|+++ .+|..++.+ -.++++..++|.+.-+|+.+..|.+|+.|.+++|.+-.+|..|--
T Consensus 301 NkL~FeGiPSGIGKL--------------------~~Levf~aanN~LElVPEglcRC~kL~kL~L~~NrLiTLPeaIHl 360 (1255)
T KOG0444|consen 301 NKLTFEGIPSGIGKL--------------------IQLEVFHAANNKLELVPEGLCRCVKLQKLKLDHNRLITLPEAIHL 360 (1255)
T ss_pred CcccccCCccchhhh--------------------hhhHHHHhhccccccCchhhhhhHHHHHhcccccceeechhhhhh
Confidence 6555 555554333 456778888888888888888888888888888888888877754
Q ss_pred CCCccCcceeeccCCCCC
Q psy9862 337 LDLASHKSVLKMDFNPWV 354 (378)
Q Consensus 337 l~~~~~l~~l~l~~n~~~ 354 (378)
++ .+.+||+++|+-.
T Consensus 361 L~---~l~vLDlreNpnL 375 (1255)
T KOG0444|consen 361 LP---DLKVLDLRENPNL 375 (1255)
T ss_pred cC---CcceeeccCCcCc
Confidence 54 8888888888843
No 7
>KOG0444|consensus
Probab=99.93 E-value=1.6e-27 Score=220.09 Aligned_cols=306 Identities=26% Similarity=0.378 Sum_probs=237.3
Q ss_pred CCceeeccCCcccCcCcc-cccccccccEEEcccccccCchhHHHHhhccccccCCccccCC---------CCCCCCccc
Q psy9862 30 NPELELADKGLSSFEELP-GLMNMLYITRITLSHNKLKGEIIVQVIKGLSNSKYNYIPILHV---------TSLPILPFL 99 (378)
Q Consensus 30 l~~L~l~~~~~~~~~~~~-~l~~~~~L~~L~ls~~~l~~~~~~~~~~~l~~l~~~~l~~l~l---------~~~~~~~~l 99 (378)
++.+|+++|++++ ...| ++.+|++++.|.|...++. ++|+.+.++. . |+.+.+ +.+..+|.+
T Consensus 9 VrGvDfsgNDFsg-~~FP~~v~qMt~~~WLkLnrt~L~-----~vPeEL~~lq-k-LEHLs~~HN~L~~vhGELs~Lp~L 80 (1255)
T KOG0444|consen 9 VRGVDFSGNDFSG-DRFPHDVEQMTQMTWLKLNRTKLE-----QVPEELSRLQ-K-LEHLSMAHNQLISVHGELSDLPRL 80 (1255)
T ss_pred eecccccCCcCCC-CcCchhHHHhhheeEEEechhhhh-----hChHHHHHHh-h-hhhhhhhhhhhHhhhhhhccchhh
Confidence 6789999999997 3445 6779999999999998876 4666666655 4 444433 244558888
Q ss_pred hhccccCCcccc--cCCCCCCCCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCCCccCCccc-cCCCCCcEEec
Q psy9862 100 FLQFPCRMNRLS--SLPRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAEI-GNLKNLQILVL 176 (378)
Q Consensus 100 ~~~l~l~~~~l~--~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~~l~~~l-~~l~~L~~L~l 176 (378)
+ .+.+..|++. .+|..+..+..|++||+++|.+. ..|..+....++-.|++++|++.+||..+ -.+..|-+||+
T Consensus 81 R-sv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~--EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDL 157 (1255)
T KOG0444|consen 81 R-SVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR--EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDL 157 (1255)
T ss_pred H-HHhhhccccccCCCCchhcccccceeeecchhhhh--hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhcc
Confidence 9 9999999988 68888889999999999999998 46888888888899999999999998874 57788999999
Q ss_pred CCCCCccCChhhcCCCCCcEEeccCCcCcccCcccccccccccccccccCCCCceeccCCc--cccccccccCCcCccee
Q psy9862 177 RENDLIEIPKELGNLTRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWLVLREND--LIEIPKELGNLSRLREL 254 (378)
Q Consensus 177 ~~n~~~~l~~~l~~l~~L~~L~l~~~~l~~~~~~~~~l~~l~~l~~~~~~~~~~l~l~~~~--l~~l~~~l~~~~~L~~L 254 (378)
++|++..+|+.+..+..|+.|.+++|.+.-+ -+..+++++.+.. +.+++.+ +..+|.++..+.+|..+
T Consensus 158 S~NrLe~LPPQ~RRL~~LqtL~Ls~NPL~hf--QLrQLPsmtsL~v--------Lhms~TqRTl~N~Ptsld~l~NL~dv 227 (1255)
T KOG0444|consen 158 SNNRLEMLPPQIRRLSMLQTLKLSNNPLNHF--QLRQLPSMTSLSV--------LHMSNTQRTLDNIPTSLDDLHNLRDV 227 (1255)
T ss_pred ccchhhhcCHHHHHHhhhhhhhcCCChhhHH--HHhcCccchhhhh--------hhcccccchhhcCCCchhhhhhhhhc
Confidence 9999999999999999999999999987522 1233444444444 3344443 34677777788888888
Q ss_pred ecccccCCcCCCCCCCcccccccccccccCCCCcc------CccchhhhhccCccccccchhhcCCCCCCEEEeecCCCC
Q psy9862 255 HIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWVT------PIADQLQLVLRENDLIEIPKELGNLSRLRELHIQANRLT 328 (378)
Q Consensus 255 ~l~~n~l~~~~~~~~~l~~~~~l~~l~l~~~~~~~------~~~~l~~L~l~~n~l~~l~~~l~~~~~L~~L~l~~n~l~ 328 (378)
|++.|.+..+|.-+..+ ++|..|++++|.++. .-.++++|++|.|.++.+|.++..+++|+.|.+.+|+++
T Consensus 228 DlS~N~Lp~vPecly~l---~~LrrLNLS~N~iteL~~~~~~W~~lEtLNlSrNQLt~LP~avcKL~kL~kLy~n~NkL~ 304 (1255)
T KOG0444|consen 228 DLSENNLPIVPECLYKL---RNLRRLNLSGNKITELNMTEGEWENLETLNLSRNQLTVLPDAVCKLTKLTKLYANNNKLT 304 (1255)
T ss_pred cccccCCCcchHHHhhh---hhhheeccCcCceeeeeccHHHHhhhhhhccccchhccchHHHhhhHHHHHHHhccCccc
Confidence 88888777777655443 667777777777653 334677899999999999999988999999999999887
Q ss_pred --cCChhhccCCCccCcceeeccCCCCCccchHHhhh
Q psy9862 329 --VLPPEIGNLDLASHKSVLKMDFNPWVTPIADQLQV 363 (378)
Q Consensus 329 --~~~~~~~~l~~~~~l~~l~l~~n~~~~~~~~~~~~ 363 (378)
++|++|+.+. .|.++...+|.+. -+|+.+|+
T Consensus 305 FeGiPSGIGKL~---~Levf~aanN~LE-lVPEglcR 337 (1255)
T KOG0444|consen 305 FEGIPSGIGKLI---QLEVFHAANNKLE-LVPEGLCR 337 (1255)
T ss_pred ccCCccchhhhh---hhHHHHhhccccc-cCchhhhh
Confidence 9999998887 8888888888764 56677654
No 8
>KOG4194|consensus
Probab=99.91 E-value=4.3e-25 Score=202.56 Aligned_cols=327 Identities=20% Similarity=0.264 Sum_probs=243.7
Q ss_pred ccCCceeeccCCcccCcCccccccc-ccccEEEcccccccCchhHHHH---hhccccccCCccccCCCCCC-----CCcc
Q psy9862 28 IKNPELELADKGLSSFEELPGLMNM-LYITRITLSHNKLKGEIIVQVI---KGLSNSKYNYIPILHVTSLP-----ILPF 98 (378)
Q Consensus 28 ~~l~~L~l~~~~~~~~~~~~~l~~~-~~L~~L~ls~~~l~~~~~~~~~---~~l~~l~~~~l~~l~l~~~~-----~~~~ 98 (378)
.+++++++..|.++ .||.+... .+|+.|+|.+|.++. +..+-. +++..+. |..+.++.++ .-.+
T Consensus 102 ~nLq~v~l~~N~Lt---~IP~f~~~sghl~~L~L~~N~I~s-v~se~L~~l~alrslD---LSrN~is~i~~~sfp~~~n 174 (873)
T KOG4194|consen 102 PNLQEVNLNKNELT---RIPRFGHESGHLEKLDLRHNLISS-VTSEELSALPALRSLD---LSRNLISEIPKPSFPAKVN 174 (873)
T ss_pred Ccceeeeeccchhh---hcccccccccceeEEeeecccccc-ccHHHHHhHhhhhhhh---hhhchhhcccCCCCCCCCC
Confidence 46889999999987 45666644 469999999998773 333322 2233333 4444444433 3566
Q ss_pred chhccccCCcccccCCCC-CCCCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCCCccC-CccccCCCCCcEEec
Q psy9862 99 LFLQFPCRMNRLSSLPRG-FGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVL-PAEIGNLKNLQILVL 176 (378)
Q Consensus 99 l~~~l~l~~~~l~~~~~~-~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~~l-~~~l~~l~~L~~L~l 176 (378)
++ ++++++|.|+.+-.. |..+.+|.+|.++.|.++... +..|+++++|+.|++..|++..+ .-.|..+++|+.|.+
T Consensus 175 i~-~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp-~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlkl 252 (873)
T KOG4194|consen 175 IK-KLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLP-QRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKL 252 (873)
T ss_pred ce-EEeeccccccccccccccccchheeeecccCcccccC-HHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhh
Confidence 78 899999999977655 888889999999999998632 44577799999999999988755 445778888888888
Q ss_pred CCCCCccCC-hhhcCCCCCcEEeccCCcCcccC-ccccccccccccccc-------------ccCCCCceeccCCccccc
Q psy9862 177 RENDLIEIP-KELGNLTRLRELHIQANRLTVLP-PEIGNLDLASHKSVL-------------KMDFNPWLVLRENDLIEI 241 (378)
Q Consensus 177 ~~n~~~~l~-~~l~~l~~L~~L~l~~~~l~~~~-~~~~~l~~l~~l~~~-------------~~~~~~~l~l~~~~l~~l 241 (378)
..|.+..+- ..|..+.++++|++..|.++.+. .++..++.++.+... ....+.+|+++.|.++.+
T Consensus 253 qrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l 332 (873)
T KOG4194|consen 253 QRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRL 332 (873)
T ss_pred hhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccC
Confidence 888888773 45778888888888888887443 355666666554322 234456799999999988
Q ss_pred ccc-ccCCcCcceeecccccCCcCCCCCCCcccccccccccccCCCCc----------cCccchhhhhccCccccccch-
Q psy9862 242 PKE-LGNLSRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWV----------TPIADQLQLVLRENDLIEIPK- 309 (378)
Q Consensus 242 ~~~-l~~~~~L~~L~l~~n~l~~~~~~~~~l~~~~~l~~l~l~~~~~~----------~~~~~l~~L~l~~n~l~~l~~- 309 (378)
++. +..+..|++|++++|.+..+.+. .+.-+++|+.|+++.|.+. ...+.+..|++.||++..+|.
T Consensus 333 ~~~sf~~L~~Le~LnLs~Nsi~~l~e~--af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~kr 410 (873)
T KOG4194|consen 333 DEGSFRVLSQLEELNLSHNSIDHLAEG--AFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKR 410 (873)
T ss_pred ChhHHHHHHHhhhhcccccchHHHHhh--HHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchh
Confidence 764 88999999999999998855443 3556689999999999753 247889999999999999986
Q ss_pred hhcCCCCCCEEEeecCCCCcCChhhccCCCccCcceeeccCCCCCccchHHhhhhhHHHHH
Q psy9862 310 ELGNLSRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWVTPIADQLQVGISHVLD 370 (378)
Q Consensus 310 ~l~~~~~L~~L~l~~n~l~~~~~~~~~l~~~~~l~~l~l~~n~~~~~~~~~~~~~~~~~~~ 370 (378)
++.++++|++||+.+|-|.++.+.. +... +|++|.+..-.|.+++--.|. ..|+++
T Consensus 411 Afsgl~~LE~LdL~~NaiaSIq~nA--Fe~m-~Lk~Lv~nSssflCDCql~Wl--~qWl~~ 466 (873)
T KOG4194|consen 411 AFSGLEALEHLDLGDNAIASIQPNA--FEPM-ELKELVMNSSSFLCDCQLKWL--AQWLYR 466 (873)
T ss_pred hhccCcccceecCCCCcceeecccc--cccc-hhhhhhhcccceEEeccHHHH--HHHHHh
Confidence 5889999999999999999776644 4333 888999988888888866665 444443
No 9
>KOG0617|consensus
Probab=99.90 E-value=1.1e-25 Score=176.53 Aligned_cols=203 Identities=47% Similarity=0.829 Sum_probs=137.5
Q ss_pred CccccEEecCCCCCccCCccccCCCCCcEEecCCCCCccCChhhcCCCCCcEEeccCCcCcccCcccccccccccccccc
Q psy9862 145 LETLRALYLGDNDFEVLPAEIGNLKNLQILVLRENDLIEIPKELGNLTRLRELHIQANRLTVLPPEIGNLDLASHKSVLK 224 (378)
Q Consensus 145 l~~L~~L~l~~n~l~~l~~~l~~l~~L~~L~l~~n~~~~l~~~l~~l~~L~~L~l~~~~l~~~~~~~~~l~~l~~l~~~~ 224 (378)
+.+++.|.+++|.++.+|..+..+.+|+.|++.+|+++++|..++.++.|++|+++.|.+..+|.+++.++.++.
T Consensus 32 ~s~ITrLtLSHNKl~~vppnia~l~nlevln~~nnqie~lp~~issl~klr~lnvgmnrl~~lprgfgs~p~lev----- 106 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLTVVPPNIAELKNLEVLNLSNNQIEELPTSISSLPKLRILNVGMNRLNILPRGFGSFPALEV----- 106 (264)
T ss_pred hhhhhhhhcccCceeecCCcHHHhhhhhhhhcccchhhhcChhhhhchhhhheecchhhhhcCccccCCCchhhh-----
Confidence 344444555555555555445555555555555555555555555555555555555555444444444444333
Q ss_pred cCCCCceeccCCccc--cccccccCCcCcceeecccccCCcCCCCCCCcccccccccccccCCCCccCccchhhhhccCc
Q psy9862 225 MDFNPWLVLRENDLI--EIPKELGNLSRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWVTPIADQLQLVLREN 302 (378)
Q Consensus 225 ~~~~~~l~l~~~~l~--~l~~~l~~~~~L~~L~l~~n~l~~~~~~~~~l~~~~~l~~l~l~~~~~~~~~~~l~~L~l~~n 302 (378)
+++++|.+. .+|..|..+..|+.|++++|.+.-+|+.++.+ .+++.|.+..|
T Consensus 107 ------ldltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~dvg~l--------------------t~lqil~lrdn 160 (264)
T KOG0617|consen 107 ------LDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPDVGKL--------------------TNLQILSLRDN 160 (264)
T ss_pred ------hhccccccccccCCcchhHHHHHHHHHhcCCCcccCChhhhhh--------------------cceeEEeeccC
Confidence 444444443 45555666666777777777666666654433 34445566667
Q ss_pred cccccchhhcCCCCCCEEEeecCCCCcCChhhccCCCccCcceeeccCCCCCccchHHhhhhhHHHHHHHhhhcCC
Q psy9862 303 DLIEIPKELGNLSRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWVTPIADQLQVGISHVLDYIRSETYK 378 (378)
Q Consensus 303 ~l~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~~~l~~~~~l~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (378)
.+-++|..++.++.|++|.+.+|.++-+|+.++++....+-++..+.+|||.-+|++.+..|...+++|++++.||
T Consensus 161 dll~lpkeig~lt~lrelhiqgnrl~vlppel~~l~l~~~k~v~r~E~NPwv~pIaeQf~lG~shV~~yirtetYk 236 (264)
T KOG0617|consen 161 DLLSLPKEIGDLTRLRELHIQGNRLTVLPPELANLDLVGNKQVMRMEENPWVNPIAEQFLLGISHVIDYIRTETYK 236 (264)
T ss_pred chhhCcHHHHHHHHHHHHhcccceeeecChhhhhhhhhhhHHHHhhhhCCCCChHHHHHHhhHHHHHHHHhhhhhh
Confidence 7777888888889999999999999999999998887778888999999999999999999999999999999885
No 10
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.87 E-value=1.4e-21 Score=192.63 Aligned_cols=262 Identities=28% Similarity=0.300 Sum_probs=155.3
Q ss_pred ccCCceeeccCCcccCcCcccccccccccEEEcccccccCchhHHHHhhccccccCCccccCCCCCCCCccchhccccCC
Q psy9862 28 IKNPELELADKGLSSFEELPGLMNMLYITRITLSHNKLKGEIIVQVIKGLSNSKYNYIPILHVTSLPILPFLFLQFPCRM 107 (378)
Q Consensus 28 ~~l~~L~l~~~~~~~~~~~~~l~~~~~L~~L~ls~~~l~~~~~~~~~~~l~~l~~~~l~~l~l~~~~~~~~l~~~l~l~~ 107 (378)
.+-..|+++++.++.++ +.+. ++|+.|++.+|+++. +|... ++|+ +|++++
T Consensus 201 ~~~~~LdLs~~~LtsLP--~~l~--~~L~~L~L~~N~Lt~-----LP~lp-------------------~~Lk-~LdLs~ 251 (788)
T PRK15387 201 NGNAVLNVGESGLTTLP--DCLP--AHITTLVIPDNNLTS-----LPALP-------------------PELR-TLEVSG 251 (788)
T ss_pred CCCcEEEcCCCCCCcCC--cchh--cCCCEEEccCCcCCC-----CCCCC-------------------CCCc-EEEecC
Confidence 34567899999888644 2232 478999999998874 33222 2344 666666
Q ss_pred cccccCCCCCCCCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCCCccCCccccCCCCCcEEecCCCCCccCChh
Q psy9862 108 NRLSSLPRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLKNLQILVLRENDLIEIPKE 187 (378)
Q Consensus 108 ~~l~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~~l~~~l~~l~~L~~L~l~~n~~~~l~~~ 187 (378)
|+++.+|.. .++|+.|++++|.+.. ++.. ..+|+.|++++|+++.+|. .+++|++|++++|.++.+|..
T Consensus 252 N~LtsLP~l---p~sL~~L~Ls~N~L~~--Lp~l---p~~L~~L~Ls~N~Lt~LP~---~p~~L~~LdLS~N~L~~Lp~l 320 (788)
T PRK15387 252 NQLTSLPVL---PPGLLELSIFSNPLTH--LPAL---PSGLCKLWIFGNQLTSLPV---LPPGLQELSVSDNQLASLPAL 320 (788)
T ss_pred CccCcccCc---ccccceeeccCCchhh--hhhc---hhhcCEEECcCCccccccc---cccccceeECCCCccccCCCC
Confidence 666665542 2456666666666653 2321 2345666666666665553 234566666666666655432
Q ss_pred hcCCCCCcEEeccCCcCcccCcccccccccccccccccCCCCceeccCCccccccccccCCcCcceeecccccCCcCCCC
Q psy9862 188 LGNLTRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWLVLRENDLIEIPKELGNLSRLRELHIQANRLTVLPPE 267 (378)
Q Consensus 188 l~~l~~L~~L~l~~~~l~~~~~~~~~l~~l~~l~~~~~~~~~~l~l~~~~l~~l~~~l~~~~~L~~L~l~~n~l~~~~~~ 267 (378)
. .+|+.|++++|.++.+|.... .++.|++++|.+..+|.. .++|+.|++++|.+..+|..
T Consensus 321 p---~~L~~L~Ls~N~L~~LP~lp~--------------~Lq~LdLS~N~Ls~LP~l---p~~L~~L~Ls~N~L~~LP~l 380 (788)
T PRK15387 321 P---SELCKLWAYNNQLTSLPTLPS--------------GLQELSVSDNQLASLPTL---PSELYKLWAYNNRLTSLPAL 380 (788)
T ss_pred c---ccccccccccCcccccccccc--------------ccceEecCCCccCCCCCC---CcccceehhhccccccCccc
Confidence 1 235556666666655543111 122266666666655542 23455666666666655532
Q ss_pred CCCcccccccccccccCCCCcc---CccchhhhhccCccccccchhhcCCCCCCEEEeecCCCCcCChhhccCCCccCcc
Q psy9862 268 IGNLDLASHKSVLKMDFNPWVT---PIADQLQLVLRENDLIEIPKELGNLSRLRELHIQANRLTVLPPEIGNLDLASHKS 344 (378)
Q Consensus 268 ~~~l~~~~~l~~l~l~~~~~~~---~~~~l~~L~l~~n~l~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~~~l~~~~~l~ 344 (378)
. .+|+.+++++|.+.+ .++.++.|++++|.++.+|.. ..+|+.|++++|+|+.+|..+..++ .++
T Consensus 381 ~------~~L~~LdLs~N~Lt~LP~l~s~L~~LdLS~N~LssIP~l---~~~L~~L~Ls~NqLt~LP~sl~~L~---~L~ 448 (788)
T PRK15387 381 P------SGLKELIVSGNRLTSLPVLPSELKELMVSGNRLTSLPML---PSGLLSLSVYRNQLTRLPESLIHLS---SET 448 (788)
T ss_pred c------cccceEEecCCcccCCCCcccCCCEEEccCCcCCCCCcc---hhhhhhhhhccCcccccChHHhhcc---CCC
Confidence 1 345556666665543 123566777777777777653 2457777888888887777666554 777
Q ss_pred eeeccCCCCCccchHHh
Q psy9862 345 VLKMDFNPWVTPIADQL 361 (378)
Q Consensus 345 ~l~l~~n~~~~~~~~~~ 361 (378)
.+++++|++++.+++.+
T Consensus 449 ~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 449 TVNLEGNPLSERTLQAL 465 (788)
T ss_pred eEECCCCCCCchHHHHH
Confidence 77888888877777665
No 11
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.84 E-value=3.7e-20 Score=182.64 Aligned_cols=241 Identities=27% Similarity=0.270 Sum_probs=162.3
Q ss_pred ccCCceeeccCCcccCcCcccccccccccEEEcccccccCchhHHHHhhccccccCCccccCCCCCCCCccchhccccCC
Q psy9862 28 IKNPELELADKGLSSFEELPGLMNMLYITRITLSHNKLKGEIIVQVIKGLSNSKYNYIPILHVTSLPILPFLFLQFPCRM 107 (378)
Q Consensus 28 ~~l~~L~l~~~~~~~~~~~~~l~~~~~L~~L~ls~~~l~~~~~~~~~~~l~~l~~~~l~~l~l~~~~~~~~l~~~l~l~~ 107 (378)
..++.|++.+|.++.++.. .++|++|++++|.++. +|.... +++ .|++++
T Consensus 222 ~~L~~L~L~~N~Lt~LP~l-----p~~Lk~LdLs~N~Lts-----LP~lp~-------------------sL~-~L~Ls~ 271 (788)
T PRK15387 222 AHITTLVIPDNNLTSLPAL-----PPELRTLEVSGNQLTS-----LPVLPP-------------------GLL-ELSIFS 271 (788)
T ss_pred cCCCEEEccCCcCCCCCCC-----CCCCcEEEecCCccCc-----ccCccc-------------------ccc-eeeccC
Confidence 4689999999999876532 4899999999999874 232222 333 667777
Q ss_pred cccccCCCCCCCCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCCCccCCccccCCCCCcEEecCCCCCccCChh
Q psy9862 108 NRLSSLPRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLKNLQILVLRENDLIEIPKE 187 (378)
Q Consensus 108 ~~l~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~~l~~~l~~l~~L~~L~l~~n~~~~l~~~ 187 (378)
|.++.+|..+ ..|+.|++++|.+.. +|. .+++|+.|++++|+++.+|.. ..+|+.|++++|.++.+|..
T Consensus 272 N~L~~Lp~lp---~~L~~L~Ls~N~Lt~--LP~---~p~~L~~LdLS~N~L~~Lp~l---p~~L~~L~Ls~N~L~~LP~l 340 (788)
T PRK15387 272 NPLTHLPALP---SGLCKLWIFGNQLTS--LPV---LPPGLQELSVSDNQLASLPAL---PSELCKLWAYNNQLTSLPTL 340 (788)
T ss_pred Cchhhhhhch---hhcCEEECcCCcccc--ccc---cccccceeECCCCccccCCCC---cccccccccccCcccccccc
Confidence 7776665422 456677777777763 333 235677777777777766542 23566777777777766531
Q ss_pred hcCCCCCcEEeccCCcCcccCcccccccccccccccccCCCCceeccCCccccccccccCCcCcceeecccccCCcCCCC
Q psy9862 188 LGNLTRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWLVLRENDLIEIPKELGNLSRLRELHIQANRLTVLPPE 267 (378)
Q Consensus 188 l~~l~~L~~L~l~~~~l~~~~~~~~~l~~l~~l~~~~~~~~~~l~l~~~~l~~l~~~l~~~~~L~~L~l~~n~l~~~~~~ 267 (378)
..+|+.|++++|.++.+|..... +..+++..|.+..+|.. ..+|+.|++++|.+..+|..
T Consensus 341 ---p~~Lq~LdLS~N~Ls~LP~lp~~--------------L~~L~Ls~N~L~~LP~l---~~~L~~LdLs~N~Lt~LP~l 400 (788)
T PRK15387 341 ---PSGLQELSVSDNQLASLPTLPSE--------------LYKLWAYNNRLTSLPAL---PSGLKELIVSGNRLTSLPVL 400 (788)
T ss_pred ---ccccceEecCCCccCCCCCCCcc--------------cceehhhccccccCccc---ccccceEEecCCcccCCCCc
Confidence 14677777777777766543211 11255666666666643 24577777777777766643
Q ss_pred CCCcccccccccccccCCCCcc---CccchhhhhccCccccccchhhcCCCCCCEEEeecCCCC-cCChhhc
Q psy9862 268 IGNLDLASHKSVLKMDFNPWVT---PIADQLQLVLRENDLIEIPKELGNLSRLRELHIQANRLT-VLPPEIG 335 (378)
Q Consensus 268 ~~~l~~~~~l~~l~l~~~~~~~---~~~~l~~L~l~~n~l~~l~~~l~~~~~L~~L~l~~n~l~-~~~~~~~ 335 (378)
. ++|+.|++++|.+.+ .+..++.|++++|.++.+|..+..+++|+.|++++|+++ ..+..+.
T Consensus 401 ~------s~L~~LdLS~N~LssIP~l~~~L~~L~Ls~NqLt~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~ 466 (788)
T PRK15387 401 P------SELKELMVSGNRLTSLPMLPSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLSERTLQALR 466 (788)
T ss_pred c------cCCCEEEccCCcCCCCCcchhhhhhhhhccCcccccChHHhhccCCCeEECCCCCCCchHHHHHH
Confidence 2 456667777776654 123577899999999999999999999999999999999 4444443
No 12
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.83 E-value=3.1e-20 Score=184.17 Aligned_cols=250 Identities=26% Similarity=0.408 Sum_probs=132.0
Q ss_pred ccCCceeeccCCcccCcCcccccccccccEEEcccccccCchhHHHHhhccccccCCccccCCCCCCCCccchhccccCC
Q psy9862 28 IKNPELELADKGLSSFEELPGLMNMLYITRITLSHNKLKGEIIVQVIKGLSNSKYNYIPILHVTSLPILPFLFLQFPCRM 107 (378)
Q Consensus 28 ~~l~~L~l~~~~~~~~~~~~~l~~~~~L~~L~ls~~~l~~~~~~~~~~~l~~l~~~~l~~l~l~~~~~~~~l~~~l~l~~ 107 (378)
.+.+.|++++++++.++. .+ .++|+.|++++|+++. +|..+ .++++ .|++++
T Consensus 178 ~~~~~L~L~~~~LtsLP~--~I--p~~L~~L~Ls~N~Lts-----LP~~l------------------~~nL~-~L~Ls~ 229 (754)
T PRK15370 178 NNKTELRLKILGLTTIPA--CI--PEQITTLILDNNELKS-----LPENL------------------QGNIK-TLYANS 229 (754)
T ss_pred cCceEEEeCCCCcCcCCc--cc--ccCCcEEEecCCCCCc-----CChhh------------------ccCCC-EEECCC
Confidence 345667776666665432 11 1456677777776652 22111 11233 666666
Q ss_pred cccccCCCCCCCCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCCCccCCccccCCCCCcEEecCCCCCccCChh
Q psy9862 108 NRLSSLPRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLKNLQILVLRENDLIEIPKE 187 (378)
Q Consensus 108 ~~l~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~~l~~~l~~l~~L~~L~l~~n~~~~l~~~ 187 (378)
|.++.+|..+. ..|+.|++++|.+.. +|..+. .+|+.|++++|+++.+|..+. .+|++|++++|.++.+|..
T Consensus 230 N~LtsLP~~l~--~~L~~L~Ls~N~L~~--LP~~l~--s~L~~L~Ls~N~L~~LP~~l~--~sL~~L~Ls~N~Lt~LP~~ 301 (754)
T PRK15370 230 NQLTSIPATLP--DTIQEMELSINRITE--LPERLP--SALQSLDLFHNKISCLPENLP--EELRYLSVYDNSIRTLPAH 301 (754)
T ss_pred CccccCChhhh--ccccEEECcCCccCc--CChhHh--CCCCEEECcCCccCccccccC--CCCcEEECCCCccccCccc
Confidence 66666655432 356666666666653 343332 356666666666665555432 3566666666666665543
Q ss_pred hcCCCCCcEEeccCCcCcccCcccccccccccccccccCCCCceeccCCccccccccccCCcCcceeecccccCCcCCCC
Q psy9862 188 LGNLTRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWLVLRENDLIEIPKELGNLSRLRELHIQANRLTVLPPE 267 (378)
Q Consensus 188 l~~l~~L~~L~l~~~~l~~~~~~~~~l~~l~~l~~~~~~~~~~l~l~~~~l~~l~~~l~~~~~L~~L~l~~n~l~~~~~~ 267 (378)
+. .+|+.|++++|.++.+|..+. . .++.+++.+|.++.+|..+. ++|+.|++++|+++.+|..
T Consensus 302 lp--~sL~~L~Ls~N~Lt~LP~~l~--~-----------sL~~L~Ls~N~Lt~LP~~l~--~sL~~L~Ls~N~L~~LP~~ 364 (754)
T PRK15370 302 LP--SGITHLNVQSNSLTALPETLP--P-----------GLKTLEAGENALTSLPASLP--PELQVLDVSKNQITVLPET 364 (754)
T ss_pred ch--hhHHHHHhcCCccccCCcccc--c-----------cceeccccCCccccCChhhc--CcccEEECCCCCCCcCChh
Confidence 32 356666666666655543221 1 12225555666655554432 4566666666666555532
Q ss_pred CCCcccccccccccccCCCCccCccchhhhhccCccccccchhhcCCCCCCEEEeecCCCCcCChhhccCC-CccCccee
Q psy9862 268 IGNLDLASHKSVLKMDFNPWVTPIADQLQLVLRENDLIEIPKELGNLSRLRELHIQANRLTVLPPEIGNLD-LASHKSVL 346 (378)
Q Consensus 268 ~~~l~~~~~l~~l~l~~~~~~~~~~~l~~L~l~~n~l~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~~~l~-~~~~l~~l 346 (378)
+ ++.++.|++++|.++.+|..+. ..|+.|++++|+|+.+|..+..+. ..+.+..+
T Consensus 365 l----------------------p~~L~~LdLs~N~Lt~LP~~l~--~sL~~LdLs~N~L~~LP~sl~~~~~~~~~l~~L 420 (754)
T PRK15370 365 L----------------------PPTITTLDVSRNALTNLPENLP--AALQIMQASRNNLVRLPESLPHFRGEGPQPTRI 420 (754)
T ss_pred h----------------------cCCcCEEECCCCcCCCCCHhHH--HHHHHHhhccCCcccCchhHHHHhhcCCCccEE
Confidence 2 1244555555555555555443 245666666666665555443321 22455566
Q ss_pred eccCCCCC
Q psy9862 347 KMDFNPWV 354 (378)
Q Consensus 347 ~l~~n~~~ 354 (378)
++.+|+++
T Consensus 421 ~L~~Npls 428 (754)
T PRK15370 421 IVEYNPFS 428 (754)
T ss_pred EeeCCCcc
Confidence 66666654
No 13
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.81 E-value=7.7e-19 Score=184.98 Aligned_cols=242 Identities=23% Similarity=0.294 Sum_probs=169.6
Q ss_pred CccchhccccCCcc-cccCCCCCCCCCcccEEEccCCCCCCCCCCcccccCccccEEecCCC-CCccCCccccCCCCCcE
Q psy9862 96 LPFLFLQFPCRMNR-LSSLPRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDN-DFEVLPAEIGNLKNLQI 173 (378)
Q Consensus 96 ~~~l~~~l~l~~~~-l~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n-~l~~l~~~l~~l~~L~~ 173 (378)
+++++ .++++++. +..+|. +..+++|++|++++|.... .+|..+..+++|+.|++++| .++.+|..+ .+++|++
T Consensus 633 l~~Lk-~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~-~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~ 708 (1153)
T PLN03210 633 LTGLR-NIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLV-ELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYR 708 (1153)
T ss_pred CCCCC-EEECCCCCCcCcCCc-cccCCcccEEEecCCCCcc-ccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCE
Confidence 55666 77776553 445553 6667777777777766443 45666777777777777765 355666544 5667777
Q ss_pred EecCCCCCc-cCChhhcCCCCCcEEeccCCcCcccCcccccccccccccccc--------------------cCCCCcee
Q psy9862 174 LVLRENDLI-EIPKELGNLTRLRELHIQANRLTVLPPEIGNLDLASHKSVLK--------------------MDFNPWLV 232 (378)
Q Consensus 174 L~l~~n~~~-~l~~~l~~l~~L~~L~l~~~~l~~~~~~~~~l~~l~~l~~~~--------------------~~~~~~l~ 232 (378)
|++++|... .+|. ...+|+.|++++|.+..+|..+ .+.++..+.... ...++.++
T Consensus 709 L~Lsgc~~L~~~p~---~~~nL~~L~L~~n~i~~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~ 784 (1153)
T PLN03210 709 LNLSGCSRLKSFPD---ISTNISWLDLDETAIEEFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLF 784 (1153)
T ss_pred EeCCCCCCcccccc---ccCCcCeeecCCCccccccccc-cccccccccccccchhhccccccccchhhhhccccchhee
Confidence 777776432 3342 2346777777777777666543 233333222221 23456688
Q ss_pred ccCCc-cccccccccCCcCcceeecccc-cCCcCCCCCCCcccccccccccccCCCCccC----ccchhhhhccCccccc
Q psy9862 233 LREND-LIEIPKELGNLSRLRELHIQAN-RLTVLPPEIGNLDLASHKSVLKMDFNPWVTP----IADQLQLVLRENDLIE 306 (378)
Q Consensus 233 l~~~~-l~~l~~~l~~~~~L~~L~l~~n-~l~~~~~~~~~l~~~~~l~~l~l~~~~~~~~----~~~l~~L~l~~n~l~~ 306 (378)
+++|. +..+|..+.++++|+.|++++| .+..+|..+ .+++|+.++++++..... ..+++.|++++|.+++
T Consensus 785 Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~----~L~sL~~L~Ls~c~~L~~~p~~~~nL~~L~Ls~n~i~~ 860 (1153)
T PLN03210 785 LSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI----NLESLESLDLSGCSRLRTFPDISTNISDLNLSRTGIEE 860 (1153)
T ss_pred CCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC----CccccCEEECCCCCccccccccccccCEeECCCCCCcc
Confidence 88885 5678989999999999999987 466777654 457888899988755443 3468899999999999
Q ss_pred cchhhcCCCCCCEEEeecC-CCCcCChhhccCCCccCcceeeccCCC
Q psy9862 307 IPKELGNLSRLRELHIQAN-RLTVLPPEIGNLDLASHKSVLKMDFNP 352 (378)
Q Consensus 307 l~~~l~~~~~L~~L~l~~n-~l~~~~~~~~~l~~~~~l~~l~l~~n~ 352 (378)
+|.++..+++|++|++++| +++.+|..+..++ +|+.+++.+|.
T Consensus 861 iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~---~L~~L~l~~C~ 904 (1153)
T PLN03210 861 VPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLK---HLETVDFSDCG 904 (1153)
T ss_pred ChHHHhcCCCCCEEECCCCCCcCccCccccccc---CCCeeecCCCc
Confidence 9999999999999999986 8888887665554 88888888886
No 14
>KOG0617|consensus
Probab=99.79 E-value=1.5e-21 Score=153.30 Aligned_cols=183 Identities=43% Similarity=0.744 Sum_probs=166.5
Q ss_pred CccchhccccCCcccccCCCCCCCCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCCCccCCccccCCCCCcEEe
Q psy9862 96 LPFLFLQFPCRMNRLSSLPRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLKNLQILV 175 (378)
Q Consensus 96 ~~~l~~~l~l~~~~l~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~~l~~~l~~l~~L~~L~ 175 (378)
+..+. .+.+++|+++.+|..++.+.+|++|++++|.+. .+|..++.+++|+.|+++.|.+..+|..|+.++.|+.||
T Consensus 32 ~s~IT-rLtLSHNKl~~vppnia~l~nlevln~~nnqie--~lp~~issl~klr~lnvgmnrl~~lprgfgs~p~levld 108 (264)
T KOG0617|consen 32 MSNIT-RLTLSHNKLTVVPPNIAELKNLEVLNLSNNQIE--ELPTSISSLPKLRILNVGMNRLNILPRGFGSFPALEVLD 108 (264)
T ss_pred hhhhh-hhhcccCceeecCCcHHHhhhhhhhhcccchhh--hcChhhhhchhhhheecchhhhhcCccccCCCchhhhhh
Confidence 44566 788999999999999999999999999999998 478899999999999999999999999999999999999
Q ss_pred cCCCCCc--cCChhhcCCCCCcEEeccCCcCcccCcccccccccccccccccCCCCceeccCCccccccccccCCcCcce
Q psy9862 176 LRENDLI--EIPKELGNLTRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWLVLRENDLIEIPKELGNLSRLRE 253 (378)
Q Consensus 176 l~~n~~~--~l~~~l~~l~~L~~L~l~~~~l~~~~~~~~~l~~l~~l~~~~~~~~~~l~l~~~~l~~l~~~l~~~~~L~~ 253 (378)
+++|.+. .+|..|..+..|+.|++++|.+..+|+.++++++++- +.+.+|++-.+|..++.+..|++
T Consensus 109 ltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~dvg~lt~lqi-----------l~lrdndll~lpkeig~lt~lre 177 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPDVGKLTNLQI-----------LSLRDNDLLSLPKEIGDLTRLRE 177 (264)
T ss_pred ccccccccccCCcchhHHHHHHHHHhcCCCcccCChhhhhhcceeE-----------EeeccCchhhCcHHHHHHHHHHH
Confidence 9999998 5799999999999999999999999999998887765 88999999999999999999999
Q ss_pred eecccccCCcCCCCCCCcccccccccccccCCCCccCcc
Q psy9862 254 LHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWVTPIA 292 (378)
Q Consensus 254 L~l~~n~l~~~~~~~~~l~~~~~l~~l~l~~~~~~~~~~ 292 (378)
|.+.+|++..+|+.++.++...+-+...+.+|+|..+..
T Consensus 178 lhiqgnrl~vlppel~~l~l~~~k~v~r~E~NPwv~pIa 216 (264)
T KOG0617|consen 178 LHIQGNRLTVLPPELANLDLVGNKQVMRMEENPWVNPIA 216 (264)
T ss_pred HhcccceeeecChhhhhhhhhhhHHHHhhhhCCCCChHH
Confidence 999999999999999988877777778888888765443
No 15
>KOG4237|consensus
Probab=99.77 E-value=1.7e-20 Score=165.21 Aligned_cols=299 Identities=21% Similarity=0.291 Sum_probs=207.2
Q ss_pred HHHhhhhhccCCceeeccCCcccCcCcccccccccccEEEcccccccCchhHHHHhhccccccCCccccCCCCCCCCccc
Q psy9862 20 KVLDESKEIKNPELELADKGLSSFEELPGLMNMLYITRITLSHNKLKGEIIVQVIKGLSNSKYNYIPILHVTSLPILPFL 99 (378)
Q Consensus 20 ~~~~~~~~~~l~~L~l~~~~~~~~~~~~~l~~~~~L~~L~ls~~~l~~~~~~~~~~~l~~l~~~~l~~l~l~~~~~~~~l 99 (378)
..+....+...++++|-.|+|+.++. ..+..+++|++|||++|.|+ .+....+..++.+.
T Consensus 59 ~eVP~~LP~~tveirLdqN~I~~iP~-~aF~~l~~LRrLdLS~N~Is-~I~p~AF~GL~~l~------------------ 118 (498)
T KOG4237|consen 59 TEVPANLPPETVEIRLDQNQISSIPP-GAFKTLHRLRRLDLSKNNIS-FIAPDAFKGLASLL------------------ 118 (498)
T ss_pred ccCcccCCCcceEEEeccCCcccCCh-hhccchhhhceecccccchh-hcChHhhhhhHhhh------------------
Confidence 45566667789999999999998762 46779999999999999998 45555555555544
Q ss_pred hhcc-ccCCcccccCCCC-CCCCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCCCccCCc-cccCCCCCcEEec
Q psy9862 100 FLQF-PCRMNRLSSLPRG-FGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPA-EIGNLKNLQILVL 176 (378)
Q Consensus 100 ~~~l-~l~~~~l~~~~~~-~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~~l~~-~l~~l~~L~~L~l 176 (378)
.+ +.++|+|+.+|.. |.++..++.|.+.-|.+.- .....|..++++..|.+.+|.+..++. .+..+..++.+.+
T Consensus 119 --~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~C-ir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhl 195 (498)
T KOG4237|consen 119 --SLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINC-IRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHL 195 (498)
T ss_pred --HHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcc-hhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhh
Confidence 44 4555999999988 9999999999999999986 335678899999999999999998887 6888899999998
Q ss_pred CCCCCc---cCC---h-------hhcCCCCCcEEeccCCcCcccCcccccccccccccccccCCCCceeccCCccccccc
Q psy9862 177 RENDLI---EIP---K-------ELGNLTRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWLVLRENDLIEIPK 243 (378)
Q Consensus 177 ~~n~~~---~l~---~-------~l~~l~~L~~L~l~~~~l~~~~~~~~~l~~l~~l~~~~~~~~~~l~l~~~~l~~l~~ 243 (378)
..|.+. .+| . .++...-.....+.+..+..+++.-- ...++.+. ..+...++....-|.
T Consensus 196 A~np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf-~c~~esl~-------s~~~~~d~~d~~cP~ 267 (498)
T KOG4237|consen 196 AQNPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKF-LCSLESLP-------SRLSSEDFPDSICPA 267 (498)
T ss_pred hcCccccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhh-hhhHHhHH-------HhhccccCcCCcChH
Confidence 888743 111 1 01111111111111111111110000 00000000 001111122223333
Q ss_pred -cccCCcCcceeecccccCCcCCCCCCCcccccccccccccCCCCccCccchhhhhccCccccccch-hhcCCCCCCEEE
Q psy9862 244 -ELGNLSRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWVTPIADQLQLVLRENDLIEIPK-ELGNLSRLRELH 321 (378)
Q Consensus 244 -~l~~~~~L~~L~l~~n~l~~~~~~~~~l~~~~~l~~l~l~~~~~~~~~~~l~~L~l~~n~l~~l~~-~l~~~~~L~~L~ 321 (378)
.|.++++|+.+++++|+++.+-+.. .+....+++|.+..|++..+.. .+.++..|+.|+
T Consensus 268 ~cf~~L~~L~~lnlsnN~i~~i~~~a-------------------Fe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~ 328 (498)
T KOG4237|consen 268 KCFKKLPNLRKLNLSNNKITRIEDGA-------------------FEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLS 328 (498)
T ss_pred HHHhhcccceEeccCCCccchhhhhh-------------------hcchhhhhhhhcCcchHHHHHHHhhhccccceeee
Confidence 3789999999999999998665432 2334567788899999987765 478899999999
Q ss_pred eecCCCCcCChhhccCCCccCcceeeccCCCCCccchHHhhhhhHHHHHHHhhhc
Q psy9862 322 IQANRLTVLPPEIGNLDLASHKSVLKMDFNPWVTPIADQLQVGISHVLDYIRSET 376 (378)
Q Consensus 322 l~~n~l~~~~~~~~~l~~~~~l~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (378)
+.+|+|+.+.+ +++..+..|.++++-.||| .+.+.+.|+-+|+|..+
T Consensus 329 L~~N~it~~~~--~aF~~~~~l~~l~l~~Np~------~CnC~l~wl~~Wlr~~~ 375 (498)
T KOG4237|consen 329 LYDNQITTVAP--GAFQTLFSLSTLNLLSNPF------NCNCRLAWLGEWLRKKS 375 (498)
T ss_pred ecCCeeEEEec--ccccccceeeeeehccCcc------cCccchHHHHHHHhhCC
Confidence 99999997755 3466777999999999999 56778999999998764
No 16
>KOG0618|consensus
Probab=99.76 E-value=1e-19 Score=175.53 Aligned_cols=174 Identities=29% Similarity=0.342 Sum_probs=121.9
Q ss_pred CCCcEEecCCCCCccCChhhcCCCCCcEEeccCCcCcccCcccccccccccccccccCCCCceeccCCccccccccccCC
Q psy9862 169 KNLQILVLRENDLIEIPKELGNLTRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWLVLRENDLIEIPKELGNL 248 (378)
Q Consensus 169 ~~L~~L~l~~n~~~~l~~~l~~l~~L~~L~l~~~~l~~~~~~~~~l~~l~~l~~~~~~~~~~l~l~~~~l~~l~~~l~~~ 248 (378)
.+++++++++|.+..+|.++..+.+|+.++...|.++.+|..+...+++.. +....|+++.+|+.....
T Consensus 241 ~nl~~~dis~n~l~~lp~wi~~~~nle~l~~n~N~l~~lp~ri~~~~~L~~-----------l~~~~nel~yip~~le~~ 309 (1081)
T KOG0618|consen 241 LNLQYLDISHNNLSNLPEWIGACANLEALNANHNRLVALPLRISRITSLVS-----------LSAAYNELEYIPPFLEGL 309 (1081)
T ss_pred ccceeeecchhhhhcchHHHHhcccceEecccchhHHhhHHHHhhhhhHHH-----------HHhhhhhhhhCCCccccc
Confidence 456666666666666666666666666666666666666655554444443 777788888888888889
Q ss_pred cCcceeecccccCCcCCCCCCCcccccccccccccCCCCc-------cCccchhhhhccCcccc-ccchhhcCCCCCCEE
Q psy9862 249 SRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWV-------TPIADQLQLVLRENDLI-EIPKELGNLSRLREL 320 (378)
Q Consensus 249 ~~L~~L~l~~n~l~~~~~~~~~l~~~~~l~~l~l~~~~~~-------~~~~~l~~L~l~~n~l~-~l~~~l~~~~~L~~L 320 (378)
++|+.|++..|.+..+|+.+.... ..++..+..+.+.+. ...+.++.|.+.+|.++ ...+.+.++++|+.|
T Consensus 310 ~sL~tLdL~~N~L~~lp~~~l~v~-~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVL 388 (1081)
T KOG0618|consen 310 KSLRTLDLQSNNLPSLPDNFLAVL-NASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVL 388 (1081)
T ss_pred ceeeeeeehhccccccchHHHhhh-hHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeee
Confidence 999999999999998887442221 122444444444432 24566888999999998 334467888899999
Q ss_pred EeecCCCCcCChhhccCCCccCcceeeccCCCCCcc
Q psy9862 321 HIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWVTP 356 (378)
Q Consensus 321 ~l~~n~l~~~~~~~~~l~~~~~l~~l~l~~n~~~~~ 356 (378)
+|++|.|..+|... +.++..|+.|+++||.+..-
T Consensus 389 hLsyNrL~~fpas~--~~kle~LeeL~LSGNkL~~L 422 (1081)
T KOG0618|consen 389 HLSYNRLNSFPASK--LRKLEELEELNLSGNKLTTL 422 (1081)
T ss_pred eecccccccCCHHH--HhchHHhHHHhcccchhhhh
Confidence 99999999888754 55566899999999998643
No 17
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.76 E-value=2.7e-18 Score=170.41 Aligned_cols=204 Identities=25% Similarity=0.379 Sum_probs=135.1
Q ss_pred ccccCCcccccCCCCCCCCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCCCccCCccccCCCCCcEEecCCCCC
Q psy9862 102 QFPCRMNRLSSLPRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLKNLQILVLRENDL 181 (378)
Q Consensus 102 ~l~l~~~~l~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~~l~~~l~~l~~L~~L~l~~n~~ 181 (378)
.+++++|.++.+|..+. .+|++|++++|.+.. +|..+. .+|+.|++++|.+..+|..+. .+|++|++++|++
T Consensus 203 ~L~Ls~N~LtsLP~~l~--~nL~~L~Ls~N~Lts--LP~~l~--~~L~~L~Ls~N~L~~LP~~l~--s~L~~L~Ls~N~L 274 (754)
T PRK15370 203 TLILDNNELKSLPENLQ--GNIKTLYANSNQLTS--IPATLP--DTIQEMELSINRITELPERLP--SALQSLDLFHNKI 274 (754)
T ss_pred EEEecCCCCCcCChhhc--cCCCEEECCCCcccc--CChhhh--ccccEEECcCCccCcCChhHh--CCCCEEECcCCcc
Confidence 66777777776666543 467777777777663 344332 357777777777776665543 4677777777777
Q ss_pred ccCChhhcCCCCCcEEeccCCcCcccCcccccccccccccccccCCCCceeccCCccccccccccCCcCcceeecccccC
Q psy9862 182 IEIPKELGNLTRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWLVLRENDLIEIPKELGNLSRLRELHIQANRL 261 (378)
Q Consensus 182 ~~l~~~l~~l~~L~~L~l~~~~l~~~~~~~~~l~~l~~l~~~~~~~~~~l~l~~~~l~~l~~~l~~~~~L~~L~l~~n~l 261 (378)
+.+|..+. .+|+.|++++|.++.+|..+. .. +..+++++|.+..+|..+ .++|+.|++++|.+
T Consensus 275 ~~LP~~l~--~sL~~L~Ls~N~Lt~LP~~lp--~s-----------L~~L~Ls~N~Lt~LP~~l--~~sL~~L~Ls~N~L 337 (754)
T PRK15370 275 SCLPENLP--EELRYLSVYDNSIRTLPAHLP--SG-----------ITHLNVQSNSLTALPETL--PPGLKTLEAGENAL 337 (754)
T ss_pred CccccccC--CCCcEEECCCCccccCcccch--hh-----------HHHHHhcCCccccCCccc--cccceeccccCCcc
Confidence 76665443 467777777777766554321 01 122566666666655433 24666677766666
Q ss_pred CcCCCCCCCcccccccccccccCCCCccCccchhhhhccCccccccchhhcCCCCCCEEEeecCCCCcCChhhccCCCcc
Q psy9862 262 TVLPPEIGNLDLASHKSVLKMDFNPWVTPIADQLQLVLRENDLIEIPKELGNLSRLRELHIQANRLTVLPPEIGNLDLAS 341 (378)
Q Consensus 262 ~~~~~~~~~l~~~~~l~~l~l~~~~~~~~~~~l~~L~l~~n~l~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~~~l~~~~ 341 (378)
+.+|..+ +++++.|++++|.++.+|..+. ++|++|++++|+|+.+|..+. .
T Consensus 338 t~LP~~l----------------------~~sL~~L~Ls~N~L~~LP~~lp--~~L~~LdLs~N~Lt~LP~~l~-----~ 388 (754)
T PRK15370 338 TSLPASL----------------------PPELQVLDVSKNQITVLPETLP--PTITTLDVSRNALTNLPENLP-----A 388 (754)
T ss_pred ccCChhh----------------------cCcccEEECCCCCCCcCChhhc--CCcCEEECCCCcCCCCCHhHH-----H
Confidence 6555322 2467788999999998887663 689999999999999998663 2
Q ss_pred CcceeeccCCCCCccchHH
Q psy9862 342 HKSVLKMDFNPWVTPIADQ 360 (378)
Q Consensus 342 ~l~~l~l~~n~~~~~~~~~ 360 (378)
.|+.|++++|.+. .+|+.
T Consensus 389 sL~~LdLs~N~L~-~LP~s 406 (754)
T PRK15370 389 ALQIMQASRNNLV-RLPES 406 (754)
T ss_pred HHHHHhhccCCcc-cCchh
Confidence 7899999999997 45543
No 18
>KOG0618|consensus
Probab=99.73 E-value=5.4e-19 Score=170.63 Aligned_cols=246 Identities=28% Similarity=0.309 Sum_probs=156.5
Q ss_pred ccchhccccCCcccccCCCCCCCCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCCCccCCccccCCCCCcEEec
Q psy9862 97 PFLFLQFPCRMNRLSSLPRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLKNLQILVL 176 (378)
Q Consensus 97 ~~l~~~l~l~~~~l~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~~l~~~l~~l~~L~~L~l 176 (378)
++++ .+....|.++.+-.. .--.++++++++++.+.. +|..+..+.+|+.+...+|.+..+|..+....+|+.|.+
T Consensus 219 ~~l~-~L~a~~n~l~~~~~~-p~p~nl~~~dis~n~l~~--lp~wi~~~~nle~l~~n~N~l~~lp~ri~~~~~L~~l~~ 294 (1081)
T KOG0618|consen 219 PSLT-ALYADHNPLTTLDVH-PVPLNLQYLDISHNNLSN--LPEWIGACANLEALNANHNRLVALPLRISRITSLVSLSA 294 (1081)
T ss_pred cchh-eeeeccCcceeeccc-cccccceeeecchhhhhc--chHHHHhcccceEecccchhHHhhHHHHhhhhhHHHHHh
Confidence 3444 445555554422111 112355566666665552 345555556666666666666555555555556666666
Q ss_pred CCCCCccCChhhcCCCCCcEEeccCCcCcccCccccccccc--ccc-------------cccccCCCCceeccCCccc-c
Q psy9862 177 RENDLIEIPKELGNLTRLRELHIQANRLTVLPPEIGNLDLA--SHK-------------SVLKMDFNPWLVLRENDLI-E 240 (378)
Q Consensus 177 ~~n~~~~l~~~l~~l~~L~~L~l~~~~l~~~~~~~~~l~~l--~~l-------------~~~~~~~~~~l~l~~~~l~-~ 240 (378)
.+|.+..+|+.....++|+.|++..|.+..+|+.+...... ..+ ....+..+..+.+.+|.++ .
T Consensus 295 ~~nel~yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~ 374 (1081)
T KOG0618|consen 295 AYNELEYIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDS 374 (1081)
T ss_pred hhhhhhhCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCccccc
Confidence 66666555555555666666666666665555422111100 000 0001111223677788886 4
Q ss_pred ccccccCCcCcceeecccccCCcCCCCCCCcccccccccccccCCCCcc------CccchhhhhccCccccccchhhcCC
Q psy9862 241 IPKELGNLSRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWVT------PIADQLQLVLRENDLIEIPKELGNL 314 (378)
Q Consensus 241 l~~~l~~~~~L~~L~l~~n~l~~~~~~~~~l~~~~~l~~l~l~~~~~~~------~~~~l~~L~l~~n~l~~l~~~l~~~ 314 (378)
..+.+.++++|+.|++++|++.++|... +.+++.|+.|++++|.+.. .++.|.+|...+|.+..+| .+..+
T Consensus 375 c~p~l~~~~hLKVLhLsyNrL~~fpas~--~~kle~LeeL~LSGNkL~~Lp~tva~~~~L~tL~ahsN~l~~fP-e~~~l 451 (1081)
T KOG0618|consen 375 CFPVLVNFKHLKVLHLSYNRLNSFPASK--LRKLEELEELNLSGNKLTTLPDTVANLGRLHTLRAHSNQLLSFP-ELAQL 451 (1081)
T ss_pred chhhhccccceeeeeecccccccCCHHH--HhchHHhHHHhcccchhhhhhHHHHhhhhhHHHhhcCCceeech-hhhhc
Confidence 4556788999999999999999888753 5667888999999998754 5667889999999999999 68888
Q ss_pred CCCCEEEeecCCCCc--CChhhccCCCccCcceeeccCCCC
Q psy9862 315 SRLRELHIQANRLTV--LPPEIGNLDLASHKSVLKMDFNPW 353 (378)
Q Consensus 315 ~~L~~L~l~~n~l~~--~~~~~~~l~~~~~l~~l~l~~n~~ 353 (378)
+.|+.+|++.|+|+. +|.. .++ ++|++||++||..
T Consensus 452 ~qL~~lDlS~N~L~~~~l~~~---~p~-p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 452 PQLKVLDLSCNNLSEVTLPEA---LPS-PNLKYLDLSGNTR 488 (1081)
T ss_pred CcceEEecccchhhhhhhhhh---CCC-cccceeeccCCcc
Confidence 999999999999993 3332 222 6999999999996
No 19
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.71 E-value=1.4e-18 Score=159.15 Aligned_cols=156 Identities=26% Similarity=0.276 Sum_probs=98.9
Q ss_pred ceeeccCCcccCcCcccccccccccEEEcccccccCchhHHHHhhccccccCCccccCCCCCCCCccchhccccCCcccc
Q psy9862 32 ELELADKGLSSFEELPGLMNMLYITRITLSHNKLKGEIIVQVIKGLSNSKYNYIPILHVTSLPILPFLFLQFPCRMNRLS 111 (378)
Q Consensus 32 ~L~l~~~~~~~~~~~~~l~~~~~L~~L~ls~~~l~~~~~~~~~~~l~~l~~~~l~~l~l~~~~~~~~l~~~l~l~~~~l~ 111 (378)
.|+|.++.++.-....-+..+++|++++++++.+++.....++..+...+ +++ +++++++.+.
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~----------------~l~-~l~l~~~~~~ 64 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQP----------------SLK-ELCLSLNETG 64 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCC----------------Cce-EEeccccccC
Confidence 46667777764333334446677888888888887766666666555544 233 4555554443
Q ss_pred -------cCCCCCCCCCcccEEEccCCCCCCCCCCcccccCc---cccEEecCCCCCc-----cCCccccCC-CCCcEEe
Q psy9862 112 -------SLPRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLE---TLRALYLGDNDFE-----VLPAEIGNL-KNLQILV 175 (378)
Q Consensus 112 -------~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~---~L~~L~l~~n~l~-----~l~~~l~~l-~~L~~L~ 175 (378)
.++..+..+++|+.|++++|.+.. ..+..+..+. +|++|++++|.++ .+...+..+ ++|++|+
T Consensus 65 ~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~-~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~ 143 (319)
T cd00116 65 RIPRGLQSLLQGLTKGCGLQELDLSDNALGP-DGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLV 143 (319)
T ss_pred CcchHHHHHHHHHHhcCceeEEEccCCCCCh-hHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEE
Confidence 122335567788888888888764 2233343333 3888888888776 233345566 7888888
Q ss_pred cCCCCCc-----cCChhhcCCCCCcEEeccCCcCc
Q psy9862 176 LRENDLI-----EIPKELGNLTRLRELHIQANRLT 205 (378)
Q Consensus 176 l~~n~~~-----~l~~~l~~l~~L~~L~l~~~~l~ 205 (378)
+++|.++ .++..+..+.+|+.|++++|.++
T Consensus 144 L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~ 178 (319)
T cd00116 144 LGRNRLEGASCEALAKALRANRDLKELNLANNGIG 178 (319)
T ss_pred cCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCc
Confidence 8888877 23445666778888888888775
No 20
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.69 E-value=7e-16 Score=162.79 Aligned_cols=285 Identities=20% Similarity=0.245 Sum_probs=190.7
Q ss_pred cccccccccEEEcccccccC--chhHHHHhhccccccCCccccCC-----CCCCC---CccchhccccCCcccccCCCCC
Q psy9862 48 GLMNMLYITRITLSHNKLKG--EIIVQVIKGLSNSKYNYIPILHV-----TSLPI---LPFLFLQFPCRMNRLSSLPRGF 117 (378)
Q Consensus 48 ~l~~~~~L~~L~ls~~~l~~--~~~~~~~~~l~~l~~~~l~~l~l-----~~~~~---~~~l~~~l~l~~~~l~~~~~~~ 117 (378)
.+..|++|+.|.+..+.... .....+|+.+..+. ..++.+++ ..+|. ..+++ .+++.++.+..++..+
T Consensus 553 aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp-~~Lr~L~~~~~~l~~lP~~f~~~~L~-~L~L~~s~l~~L~~~~ 630 (1153)
T PLN03210 553 AFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLP-PKLRLLRWDKYPLRCMPSNFRPENLV-KLQMQGSKLEKLWDGV 630 (1153)
T ss_pred HHhcCccccEEEEecccccccccceeecCcchhhcC-cccEEEEecCCCCCCCCCcCCccCCc-EEECcCcccccccccc
Confidence 46689999999997653211 11113445555544 22555544 34442 56788 8999999998888888
Q ss_pred CCCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCC-CccCCccccCCCCCcEEecCCC-CCccCChhhcCCCCCc
Q psy9862 118 GAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDND-FEVLPAEIGNLKNLQILVLREN-DLIEIPKELGNLTRLR 195 (378)
Q Consensus 118 ~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~-l~~l~~~l~~l~~L~~L~l~~n-~~~~l~~~l~~l~~L~ 195 (378)
..+++|+.|+++++.... .+| .+..+++|++|++++|. +..+|..++.+++|+.|++++| .+..+|..+ ++++|+
T Consensus 631 ~~l~~Lk~L~Ls~~~~l~-~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~ 707 (1153)
T PLN03210 631 HSLTGLRNIDLRGSKNLK-EIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLY 707 (1153)
T ss_pred ccCCCCCEEECCCCCCcC-cCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCC
Confidence 888999999999876433 334 46778899999998875 5578888889999999999986 456777655 688899
Q ss_pred EEeccCCcCc-ccCcccccccccccccccccCCCCceeccCCccccccccc-----------------------------
Q psy9862 196 ELHIQANRLT-VLPPEIGNLDLASHKSVLKMDFNPWLVLRENDLIEIPKEL----------------------------- 245 (378)
Q Consensus 196 ~L~l~~~~l~-~~~~~~~~l~~l~~l~~~~~~~~~~l~l~~~~l~~l~~~l----------------------------- 245 (378)
.|++++|... .+|....+ ++.+++.+|.+..+|..+
T Consensus 708 ~L~Lsgc~~L~~~p~~~~n--------------L~~L~L~~n~i~~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~ 773 (1153)
T PLN03210 708 RLNLSGCSRLKSFPDISTN--------------ISWLDLDETAIEEFPSNLRLENLDELILCEMKSEKLWERVQPLTPLM 773 (1153)
T ss_pred EEeCCCCCCccccccccCC--------------cCeeecCCCccccccccccccccccccccccchhhccccccccchhh
Confidence 9999988533 44432211 122444455444444321
Q ss_pred -cCCcCcceeecccccC-CcCCCCCCCcccccccccccccCCCCcc------CccchhhhhccCcc-ccccchhhcCCCC
Q psy9862 246 -GNLSRLRELHIQANRL-TVLPPEIGNLDLASHKSVLKMDFNPWVT------PIADQLQLVLREND-LIEIPKELGNLSR 316 (378)
Q Consensus 246 -~~~~~L~~L~l~~n~l-~~~~~~~~~l~~~~~l~~l~l~~~~~~~------~~~~l~~L~l~~n~-l~~l~~~l~~~~~ 316 (378)
...++|+.|++++|.. ..+|..++. +++|+.|++.+|...+ .+++++.|++++|. +..+|.. .++
T Consensus 774 ~~~~~sL~~L~Ls~n~~l~~lP~si~~---L~~L~~L~Ls~C~~L~~LP~~~~L~sL~~L~Ls~c~~L~~~p~~---~~n 847 (1153)
T PLN03210 774 TMLSPSLTRLFLSDIPSLVELPSSIQN---LHKLEHLEIENCINLETLPTGINLESLESLDLSGCSRLRTFPDI---STN 847 (1153)
T ss_pred hhccccchheeCCCCCCccccChhhhC---CCCCCEEECCCCCCcCeeCCCCCccccCEEECCCCCcccccccc---ccc
Confidence 1235677777777743 366766544 4677777777664322 34567788888764 3455432 367
Q ss_pred CCEEEeecCCCCcCChhhccCCCccCcceeeccCCCCCccchHH
Q psy9862 317 LRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWVTPIADQ 360 (378)
Q Consensus 317 L~~L~l~~n~l~~~~~~~~~l~~~~~l~~l~l~~n~~~~~~~~~ 360 (378)
|++|++++|.++.+|..+..++ +|+.+++.+|+-...+|..
T Consensus 848 L~~L~Ls~n~i~~iP~si~~l~---~L~~L~L~~C~~L~~l~~~ 888 (1153)
T PLN03210 848 ISDLNLSRTGIEEVPWWIEKFS---NLSFLDMNGCNNLQRVSLN 888 (1153)
T ss_pred cCEeECCCCCCccChHHHhcCC---CCCEEECCCCCCcCccCcc
Confidence 9999999999999998887665 8999999997644445443
No 21
>KOG0532|consensus
Probab=99.65 E-value=5.8e-18 Score=155.73 Aligned_cols=216 Identities=30% Similarity=0.479 Sum_probs=158.2
Q ss_pred EEccCCCCCCCCCCcccccCccccEEecCCCCCccCCccccCCCCCcEEecCCCCCccCChhhcCCCCCcEEeccCCcCc
Q psy9862 126 LDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLKNLQILVLRENDLIEIPKELGNLTRLRELHIQANRLT 205 (378)
Q Consensus 126 L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~~l~~~l~~l~~L~~L~l~~n~~~~l~~~l~~l~~L~~L~l~~~~l~ 205 (378)
|.|++-++..+..+..-.++..-...+++.|.+..+|..+..+..|+.+.+..|.+..+|..+.++..|++++++.|.++
T Consensus 55 l~Ls~rrlk~fpr~a~~~~ltdt~~aDlsrNR~~elp~~~~~f~~Le~liLy~n~~r~ip~~i~~L~~lt~l~ls~NqlS 134 (722)
T KOG0532|consen 55 LLLSGRRLKEFPRGAASYDLTDTVFADLSRNRFSELPEEACAFVSLESLILYHNCIRTIPEAICNLEALTFLDLSSNQLS 134 (722)
T ss_pred cccccchhhcCCCccccccccchhhhhccccccccCchHHHHHHHHHHHHHHhccceecchhhhhhhHHHHhhhccchhh
Confidence 44455444433322222445555666777777777777776677777777777777777777777777777777777776
Q ss_pred ccCcccccccccccccccccCCCCceeccCCccccccccccCCcCcceeecccccCCcCCCCCCCcccccccccccccCC
Q psy9862 206 VLPPEIGNLDLASHKSVLKMDFNPWLVLRENDLIEIPKELGNLSRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFN 285 (378)
Q Consensus 206 ~~~~~~~~l~~l~~l~~~~~~~~~~l~l~~~~l~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~~~l~~~~~l~~l~l~~~ 285 (378)
.+|..+..++- +.+-++.|+++.+|..++..+.|.+||.+.|.+..+|..++++
T Consensus 135 ~lp~~lC~lpL------------kvli~sNNkl~~lp~~ig~~~tl~~ld~s~nei~slpsql~~l-------------- 188 (722)
T KOG0532|consen 135 HLPDGLCDLPL------------KVLIVSNNKLTSLPEEIGLLPTLAHLDVSKNEIQSLPSQLGYL-------------- 188 (722)
T ss_pred cCChhhhcCcc------------eeEEEecCccccCCcccccchhHHHhhhhhhhhhhchHHhhhH--------------
Confidence 66655444331 1155566666666666666777777777777777777665444
Q ss_pred CCccCccchhhhhccCccccccchhhcCCCCCCEEEeecCCCCcCChhhccCCCccCcceeeccCCCCCccchHHhhhhh
Q psy9862 286 PWVTPIADQLQLVLRENDLIEIPKELGNLSRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWVTPIADQLQVGI 365 (378)
Q Consensus 286 ~~~~~~~~l~~L~l~~n~l~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~~~l~~~~~l~~l~l~~n~~~~~~~~~~~~~~ 365 (378)
.++..|.++-|++..+|+.+..+ .|..||+++|++..+|-.+.+++ +|++|-|.+||+.++.++.|..|+
T Consensus 189 ------~slr~l~vrRn~l~~lp~El~~L-pLi~lDfScNkis~iPv~fr~m~---~Lq~l~LenNPLqSPPAqIC~kGk 258 (722)
T KOG0532|consen 189 ------TSLRDLNVRRNHLEDLPEELCSL-PLIRLDFSCNKISYLPVDFRKMR---HLQVLQLENNPLQSPPAQICEKGK 258 (722)
T ss_pred ------HHHHHHHHhhhhhhhCCHHHhCC-ceeeeecccCceeecchhhhhhh---hheeeeeccCCCCCChHHHHhccc
Confidence 45567778888888888888866 59999999999999998888887 999999999999999999999999
Q ss_pred HHHHHHHhhhcC
Q psy9862 366 SHVLDYIRSETY 377 (378)
Q Consensus 366 ~~~~~~~~~~~~ 377 (378)
-+|++|+..+++
T Consensus 259 VHIFKyL~~qA~ 270 (722)
T KOG0532|consen 259 VHIFKYLSTQAC 270 (722)
T ss_pred eeeeeeecchhc
Confidence 999999998776
No 22
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.59 E-value=1.3e-16 Score=146.26 Aligned_cols=261 Identities=23% Similarity=0.178 Sum_probs=154.6
Q ss_pred EEEcccccccCchhHHHHhhccccccCCccccCCCCCCCCccchhccccCCcccc-----cCCCCCCCCCcccEEEccCC
Q psy9862 57 RITLSHNKLKGEIIVQVIKGLSNSKYNYIPILHVTSLPILPFLFLQFPCRMNRLS-----SLPRGFGAFPVLEVLDLTYN 131 (378)
Q Consensus 57 ~L~ls~~~l~~~~~~~~~~~l~~l~~~~l~~l~l~~~~~~~~l~~~l~l~~~~l~-----~~~~~~~~~~~L~~L~l~~n 131 (378)
.|+|..+.++++....++..+..+. .+++.++.++ .++..+...+.+++++++++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~--------------------~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~ 61 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQ--------------------VLRLEGNTLGEEAAKALASALRPQPSLKELCLSLN 61 (319)
T ss_pred ccccccCcccccchHHHHHHHhhcc--------------------EEeecCCCCcHHHHHHHHHHHhhCCCceEEecccc
Confidence 4677777777655555555455444 7788888774 34445667788999999998
Q ss_pred CCCC--C---CCCcccccCccccEEecCCCCCc-cCCccccCC---CCCcEEecCCCCCcc-----CChhhcCC-CCCcE
Q psy9862 132 NLNE--Q---SLPGNFFMLETLRALYLGDNDFE-VLPAEIGNL---KNLQILVLRENDLIE-----IPKELGNL-TRLRE 196 (378)
Q Consensus 132 ~i~~--~---~~~~~l~~l~~L~~L~l~~n~l~-~l~~~l~~l---~~L~~L~l~~n~~~~-----l~~~l~~l-~~L~~ 196 (378)
.+.. . .++..+..+++|++|++++|.+. ..+..+..+ ++|++|++++|.+.. +...+..+ ++|+.
T Consensus 62 ~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~ 141 (319)
T cd00116 62 ETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEK 141 (319)
T ss_pred ccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceE
Confidence 8762 0 11234556779999999998886 333334333 449999999998872 23445666 88999
Q ss_pred EeccCCcCcc--cCcccccccccccccccccCCCCceeccCCccc-----cccccccCCcCcceeecccccCCcCCC-CC
Q psy9862 197 LHIQANRLTV--LPPEIGNLDLASHKSVLKMDFNPWLVLRENDLI-----EIPKELGNLSRLRELHIQANRLTVLPP-EI 268 (378)
Q Consensus 197 L~l~~~~l~~--~~~~~~~l~~l~~l~~~~~~~~~~l~l~~~~l~-----~l~~~l~~~~~L~~L~l~~n~l~~~~~-~~ 268 (378)
+++++|.++. .......+. ....++.+++.+|.++ .++..+..+++|++|++++|.+..... .+
T Consensus 142 L~L~~n~l~~~~~~~~~~~~~--------~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l 213 (319)
T cd00116 142 LVLGRNRLEGASCEALAKALR--------ANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASAL 213 (319)
T ss_pred EEcCCCcCCchHHHHHHHHHH--------hCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHH
Confidence 9999998872 111111111 1122333677777665 234445556678888888777652110 00
Q ss_pred -CCcccccccccccccCCCCccCccchhhhhccCccccc-----cchhhc-CCCCCCEEEeecCCCC--cCChhhccCCC
Q psy9862 269 -GNLDLASHKSVLKMDFNPWVTPIADQLQLVLRENDLIE-----IPKELG-NLSRLRELHIQANRLT--VLPPEIGNLDL 339 (378)
Q Consensus 269 -~~l~~~~~l~~l~l~~~~~~~~~~~l~~L~l~~n~l~~-----l~~~l~-~~~~L~~L~l~~n~l~--~~~~~~~~l~~ 339 (378)
..+. ..++++.|++++|.++. +...+. ..+.|++|++++|.++ +.......++.
T Consensus 214 ~~~~~-----------------~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~ 276 (319)
T cd00116 214 AETLA-----------------SLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAE 276 (319)
T ss_pred HHHhc-----------------ccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhc
Confidence 1112 23455566666666552 111111 1367888888888776 22222233444
Q ss_pred ccCcceeeccCCCCCccchHHhh
Q psy9862 340 ASHKSVLKMDFNPWVTPIADQLQ 362 (378)
Q Consensus 340 ~~~l~~l~l~~n~~~~~~~~~~~ 362 (378)
.++++++++++|.+.....+.++
T Consensus 277 ~~~L~~l~l~~N~l~~~~~~~~~ 299 (319)
T cd00116 277 KESLLELDLRGNKFGEEGAQLLA 299 (319)
T ss_pred CCCccEEECCCCCCcHHHHHHHH
Confidence 46778888888887766544444
No 23
>KOG4237|consensus
Probab=99.55 E-value=6.7e-17 Score=142.70 Aligned_cols=254 Identities=23% Similarity=0.273 Sum_probs=176.5
Q ss_pred ccccCCcccccCCCC-CCCCCcccEEEccCCCCCCCCCCcccccCccccEEecCC-CCCccCCc-cccCCCCCcEEecCC
Q psy9862 102 QFPCRMNRLSSLPRG-FGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGD-NDFEVLPA-EIGNLKNLQILVLRE 178 (378)
Q Consensus 102 ~l~l~~~~l~~~~~~-~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~-n~l~~l~~-~l~~l~~L~~L~l~~ 178 (378)
.++|..|+|+.+|+. |..++.|++||+++|.|..+ .|++|.+++.+..|.+.+ |.|+.+|+ .|+.+.+++.|.+.-
T Consensus 71 eirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I-~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNa 149 (498)
T KOG4237|consen 71 EIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFI-APDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNA 149 (498)
T ss_pred EEEeccCCcccCChhhccchhhhceecccccchhhc-ChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcCh
Confidence 889999999999888 99999999999999999874 488899999998888866 88998887 478899999999999
Q ss_pred CCCccC-ChhhcCCCCCcEEeccCCcCcccCc-ccccccccccccccccCCCCceeccCCccc-------cccccccCCc
Q psy9862 179 NDLIEI-PKELGNLTRLRELHIQANRLTVLPP-EIGNLDLASHKSVLKMDFNPWLVLRENDLI-------EIPKELGNLS 249 (378)
Q Consensus 179 n~~~~l-~~~l~~l~~L~~L~l~~~~l~~~~~-~~~~l~~l~~l~~~~~~~~~~l~l~~~~l~-------~l~~~l~~~~ 249 (378)
|++.-+ .+.|..++++..|.+..|.+..++. .+..+... +..+...+.+++ .|.+. ..|..++..+
T Consensus 150 n~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i---~tlhlA~np~ic--dCnL~wla~~~a~~~ietsgar 224 (498)
T KOG4237|consen 150 NHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAI---KTLHLAQNPFIC--DCNLPWLADDLAMNPIETSGAR 224 (498)
T ss_pred hhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhcc---chHhhhcCcccc--ccccchhhhHHhhchhhcccce
Confidence 988855 5568999999999999998886665 33333332 233322222211 11121 2233344444
Q ss_pred CcceeecccccCCcCCCCCCCcccccccc-cccccCCC-------CccCccchhhhhccCccccccch-hhcCCCCCCEE
Q psy9862 250 RLRELHIQANRLTVLPPEIGNLDLASHKS-VLKMDFNP-------WVTPIADQLQLVLRENDLIEIPK-ELGNLSRLREL 320 (378)
Q Consensus 250 ~L~~L~l~~n~l~~~~~~~~~l~~~~~l~-~l~l~~~~-------~~~~~~~l~~L~l~~n~l~~l~~-~l~~~~~L~~L 320 (378)
......+.+.++..++..-... ....+. .+....+. .....+++.++++++|+++.+.+ +|.+...+++|
T Consensus 225 c~~p~rl~~~Ri~q~~a~kf~c-~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL 303 (498)
T KOG4237|consen 225 CVSPYRLYYKRINQEDARKFLC-SLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQEL 303 (498)
T ss_pred ecchHHHHHHHhcccchhhhhh-hHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhh
Confidence 4444444454444332210000 011110 11111111 13467789999999999998854 68899999999
Q ss_pred EeecCCCCcCChhhccCCCccCcceeeccCCCCCccchHHhhhh
Q psy9862 321 HIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWVTPIADQLQVG 364 (378)
Q Consensus 321 ~l~~n~l~~~~~~~~~l~~~~~l~~l~l~~n~~~~~~~~~~~~~ 364 (378)
.+..|+|..+...+ +..+.+|+.|++.+|+++...|-.|+-+
T Consensus 304 ~L~~N~l~~v~~~~--f~~ls~L~tL~L~~N~it~~~~~aF~~~ 345 (498)
T KOG4237|consen 304 YLTRNKLEFVSSGM--FQGLSGLKTLSLYDNQITTVAPGAFQTL 345 (498)
T ss_pred hcCcchHHHHHHHh--hhccccceeeeecCCeeEEEeccccccc
Confidence 99999999776654 6777899999999999988777666543
No 24
>KOG0532|consensus
Probab=99.42 E-value=9.9e-15 Score=134.69 Aligned_cols=195 Identities=30% Similarity=0.455 Sum_probs=128.3
Q ss_pred cccEEEccCCCCCCCCCCcccccCccccEEecCCCCCccCCccccCCCCCcEEecCCCCCccCChhhcCCCCCcEEeccC
Q psy9862 122 VLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLKNLQILVLRENDLIEIPKELGNLTRLRELHIQA 201 (378)
Q Consensus 122 ~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~~l~~~l~~l~~L~~L~l~~n~~~~l~~~l~~l~~L~~L~l~~ 201 (378)
.-...|++.|++.. +|..+..+..|+.+.++.|.+..+|..+..+..|.+++++.|++..+|..++.++ |+.|-+++
T Consensus 76 dt~~aDlsrNR~~e--lp~~~~~f~~Le~liLy~n~~r~ip~~i~~L~~lt~l~ls~NqlS~lp~~lC~lp-Lkvli~sN 152 (722)
T KOG0532|consen 76 DTVFADLSRNRFSE--LPEEACAFVSLESLILYHNCIRTIPEAICNLEALTFLDLSSNQLSHLPDGLCDLP-LKVLIVSN 152 (722)
T ss_pred chhhhhcccccccc--CchHHHHHHHHHHHHHHhccceecchhhhhhhHHHHhhhccchhhcCChhhhcCc-ceeEEEec
Confidence 34445555555542 3333344444555555555555555555555556666666666555555555443 55555666
Q ss_pred CcCcccCcccccccccccccccccCCCCceeccCCccccccccccCCcCcceeecccccCCcCCCCCCCccccccccccc
Q psy9862 202 NRLTVLPPEIGNLDLASHKSVLKMDFNPWLVLRENDLIEIPKELGNLSRLRELHIQANRLTVLPPEIGNLDLASHKSVLK 281 (378)
Q Consensus 202 ~~l~~~~~~~~~l~~l~~l~~~~~~~~~~l~l~~~~l~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~~~l~~~~~l~~l~ 281 (378)
|+++.+|..++.+..+.. ++.+.|.+..+|..+..+.+|+.|++..|++..+|..++.+
T Consensus 153 Nkl~~lp~~ig~~~tl~~-----------ld~s~nei~slpsql~~l~slr~l~vrRn~l~~lp~El~~L---------- 211 (722)
T KOG0532|consen 153 NKLTSLPEEIGLLPTLAH-----------LDVSKNEIQSLPSQLGYLTSLRDLNVRRNHLEDLPEELCSL---------- 211 (722)
T ss_pred CccccCCcccccchhHHH-----------hhhhhhhhhhchHHhhhHHHHHHHHHhhhhhhhCCHHHhCC----------
Confidence 666666655553333322 66666777777777788888888888888888888776544
Q ss_pred ccCCCCccCccchhhhhccCccccccchhhcCCCCCCEEEeecCCCCcCChhhccCCCccCcceeeccCC
Q psy9862 282 MDFNPWVTPIADQLQLVLRENDLIEIPKELGNLSRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFN 351 (378)
Q Consensus 282 l~~~~~~~~~~~l~~L~l~~n~l~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~~~l~~~~~l~~l~l~~n 351 (378)
.|..||+++|+++.+|-+|..|+.|++|-|.+|.+.+=|..+...-...-.++|+.+-+
T Consensus 212 -----------pLi~lDfScNkis~iPv~fr~m~~Lq~l~LenNPLqSPPAqIC~kGkVHIFKyL~~qA~ 270 (722)
T KOG0532|consen 212 -----------PLIRLDFSCNKISYLPVDFRKMRHLQVLQLENNPLQSPPAQICEKGKVHIFKYLSTQAC 270 (722)
T ss_pred -----------ceeeeecccCceeecchhhhhhhhheeeeeccCCCCCChHHHHhccceeeeeeecchhc
Confidence 45678899999999998899999999999999999888877755444446677777666
No 25
>KOG1909|consensus
Probab=99.34 E-value=4.4e-14 Score=123.34 Aligned_cols=195 Identities=21% Similarity=0.266 Sum_probs=112.2
Q ss_pred ccccccccEEEcccccccCchhHHHHhhccccccCCccccCCCCCCC-------CccchhccccCCcccccCCCCCCCCC
Q psy9862 49 LMNMLYITRITLSHNKLKGEIIVQVIKGLSNSKYNYIPILHVTSLPI-------LPFLFLQFPCRMNRLSSLPRGFGAFP 121 (378)
Q Consensus 49 l~~~~~L~~L~ls~~~l~~~~~~~~~~~l~~l~~~~l~~l~l~~~~~-------~~~l~~~l~l~~~~l~~~~~~~~~~~ 121 (378)
+..+..++.+++|+|.+..+.++.+.+.+.+.+ . ++.-+++++-. ...++ . +...+.+++
T Consensus 26 ~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~-~-L~~v~~sd~ftGR~~~Ei~e~L~-~----------l~~aL~~~~ 92 (382)
T KOG1909|consen 26 LEPMDSLTKLDLSGNTFGTEAARAIAKVLASKK-E-LREVNLSDMFTGRLKDEIPEALK-M----------LSKALLGCP 92 (382)
T ss_pred hcccCceEEEeccCCchhHHHHHHHHHHHhhcc-c-ceeeehHhhhcCCcHHHHHHHHH-H----------HHHHHhcCC
Confidence 335556666666666666656666666665555 3 44433332210 01111 0 112345567
Q ss_pred cccEEEccCCCCCCCCCC---cccccCccccEEecCCCCCccC-----C---------ccccCCCCCcEEecCCCCCcc-
Q psy9862 122 VLEVLDLTYNNLNEQSLP---GNFFMLETLRALYLGDNDFEVL-----P---------AEIGNLKNLQILVLRENDLIE- 183 (378)
Q Consensus 122 ~L~~L~l~~n~i~~~~~~---~~l~~l~~L~~L~l~~n~l~~l-----~---------~~l~~l~~L~~L~l~~n~~~~- 183 (378)
.|++||||+|.+....++ ..+..+.+|++|++.+|.++.. . ...+..+.|+++...+|++..
T Consensus 93 ~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ 172 (382)
T KOG1909|consen 93 KLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENG 172 (382)
T ss_pred ceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccc
Confidence 888888888887652222 2245677888888888887621 1 224556789999999998873
Q ss_pred ----CChhhcCCCCCcEEeccCCcCcccCcccccccccccccccccCCCCceeccCCccc-----cccccccCCcCccee
Q psy9862 184 ----IPKELGNLTRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWLVLRENDLI-----EIPKELGNLSRLREL 254 (378)
Q Consensus 184 ----l~~~l~~l~~L~~L~l~~~~l~~~~~~~~~l~~l~~l~~~~~~~~~~l~l~~~~l~-----~l~~~l~~~~~L~~L 254 (378)
+...+...+.|+.+.+..|.+.. ..+. +-...+.+..+++.|++.+|.++ .+...+..+++|+++
T Consensus 173 ga~~~A~~~~~~~~leevr~~qN~I~~--eG~~----al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El 246 (382)
T KOG1909|consen 173 GATALAEAFQSHPTLEEVRLSQNGIRP--EGVT----ALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLREL 246 (382)
T ss_pred cHHHHHHHHHhccccceEEEecccccC--chhH----HHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheee
Confidence 34457777889999888887751 1110 00011223333444666666664 344456666667777
Q ss_pred ecccccCC
Q psy9862 255 HIQANRLT 262 (378)
Q Consensus 255 ~l~~n~l~ 262 (378)
++++|.+.
T Consensus 247 ~l~dcll~ 254 (382)
T KOG1909|consen 247 NLGDCLLE 254 (382)
T ss_pred cccccccc
Confidence 77776655
No 26
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.27 E-value=8e-12 Score=117.97 Aligned_cols=201 Identities=30% Similarity=0.458 Sum_probs=115.5
Q ss_pred EEEccCCCCCCCCCCcccccCccccEEecCCCCCccCCccccCCC-CCcEEecCCCCCccCChhhcCCCCCcEEeccCCc
Q psy9862 125 VLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLK-NLQILVLRENDLIEIPKELGNLTRLRELHIQANR 203 (378)
Q Consensus 125 ~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~~l~~~l~~l~-~L~~L~l~~n~~~~l~~~l~~l~~L~~L~l~~~~ 203 (378)
.++...+.+.. ....+..++.++.|++.++.++.++....... +|+.|++++|.+..+|..+..+++|+.|+++.|.
T Consensus 97 ~l~~~~~~~~~--~~~~~~~~~~l~~L~l~~n~i~~i~~~~~~~~~nL~~L~l~~N~i~~l~~~~~~l~~L~~L~l~~N~ 174 (394)
T COG4886 97 SLDLNLNRLRS--NISELLELTNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIESLPSPLRNLPNLKNLDLSFND 174 (394)
T ss_pred eeecccccccc--CchhhhcccceeEEecCCcccccCccccccchhhcccccccccchhhhhhhhhccccccccccCCch
Confidence 45666665532 12234444566677777777666666655553 6777777777776666566667777777777776
Q ss_pred CcccCcccccccccccccccccCCCCceeccCCccccccccccCCcCcceeecccccCCcCCCCCCCccccccccccccc
Q psy9862 204 LTVLPPEIGNLDLASHKSVLKMDFNPWLVLRENDLIEIPKELGNLSRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMD 283 (378)
Q Consensus 204 l~~~~~~~~~l~~l~~l~~~~~~~~~~l~l~~~~l~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~~~l~~~~~l~~l~l~ 283 (378)
++.++...+....+.. +++++|++..+|........|+++.+++|.+...+..+.
T Consensus 175 l~~l~~~~~~~~~L~~-----------L~ls~N~i~~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~-------------- 229 (394)
T COG4886 175 LSDLPKLLSNLSNLNN-----------LDLSGNKISDLPPEIELLSALEELDLSNNSIIELLSSLS-------------- 229 (394)
T ss_pred hhhhhhhhhhhhhhhh-----------eeccCCccccCchhhhhhhhhhhhhhcCCcceecchhhh--------------
Confidence 6666554333332222 556666666665544455556666666664333332222
Q ss_pred CCCCccCccchhhhhccCccccccchhhcCCCCCCEEEeecCCCCcCChhhccCCCccCcceeeccCCCCCccchHHhh
Q psy9862 284 FNPWVTPIADQLQLVLRENDLIEIPKELGNLSRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWVTPIADQLQ 362 (378)
Q Consensus 284 ~~~~~~~~~~l~~L~l~~n~l~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~~~l~~~~~l~~l~l~~n~~~~~~~~~~~ 362 (378)
....+..+.+.+|++..++..+..++.+++|++++|.++.++. ++.+ .+++.+++++|.+....+....
T Consensus 230 ------~~~~l~~l~l~~n~~~~~~~~~~~l~~l~~L~~s~n~i~~i~~-~~~~---~~l~~L~~s~n~~~~~~~~~~~ 298 (394)
T COG4886 230 ------NLKNLSGLELSNNKLEDLPESIGNLSNLETLDLSNNQISSISS-LGSL---TNLRELDLSGNSLSNALPLIAL 298 (394)
T ss_pred ------hcccccccccCCceeeeccchhccccccceecccccccccccc-cccc---CccCEEeccCccccccchhhhc
Confidence 2223334445555555555556666667777777777776655 3333 3677777777766655554443
No 27
>KOG3207|consensus
Probab=99.25 E-value=3.1e-12 Score=114.90 Aligned_cols=165 Identities=21% Similarity=0.238 Sum_probs=118.3
Q ss_pred hhhhhccCCceeeccCCcccCcCcccccccccccEEEcccccccCc-hhHHHHhhccccccCCccccCCCCCCCCccchh
Q psy9862 23 DESKEIKNPELELADKGLSSFEELPGLMNMLYITRITLSHNKLKGE-IIVQVIKGLSNSKYNYIPILHVTSLPILPFLFL 101 (378)
Q Consensus 23 ~~~~~~~l~~L~l~~~~~~~~~~~~~l~~~~~L~~L~ls~~~l~~~-~~~~~~~~l~~l~~~~l~~l~l~~~~~~~~l~~ 101 (378)
.+.+-.+|++..|-++.+...+.-.....|++++.|||++|-+... .+.++.+.+++ ++
T Consensus 116 kQsn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~-------------------Le- 175 (505)
T KOG3207|consen 116 KQSNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPS-------------------LE- 175 (505)
T ss_pred HhhhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhccc-------------------ch-
Confidence 3444466889999998887654323455999999999999977641 23334444444 44
Q ss_pred ccccCCcccccCCCC--CCCCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCC-CccCCccccCCCCCcEEecCC
Q psy9862 102 QFPCRMNRLSSLPRG--FGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDND-FEVLPAEIGNLKNLQILVLRE 178 (378)
Q Consensus 102 ~l~l~~~~l~~~~~~--~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~-l~~l~~~l~~l~~L~~L~l~~ 178 (378)
.|.++.|.+....+. -..+++++.|.++.|++.+..+......+|+|+.|++..|. +..-......+..|++|++++
T Consensus 176 ~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~ 255 (505)
T KOG3207|consen 176 NLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSN 255 (505)
T ss_pred hcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccC
Confidence 888888888733222 23568899999999999875555556788999999999885 322223345567899999999
Q ss_pred CCCccCC--hhhcCCCCCcEEeccCCcCccc
Q psy9862 179 NDLIEIP--KELGNLTRLRELHIQANRLTVL 207 (378)
Q Consensus 179 n~~~~l~--~~l~~l~~L~~L~l~~~~l~~~ 207 (378)
|.+..++ .....++.|+.|+++.|+++++
T Consensus 256 N~li~~~~~~~~~~l~~L~~Lnls~tgi~si 286 (505)
T KOG3207|consen 256 NNLIDFDQGYKVGTLPGLNQLNLSSTGIASI 286 (505)
T ss_pred CcccccccccccccccchhhhhccccCcchh
Confidence 9988776 3467889999999999988743
No 28
>KOG3207|consensus
Probab=99.23 E-value=2e-12 Score=116.09 Aligned_cols=201 Identities=19% Similarity=0.208 Sum_probs=117.4
Q ss_pred CCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCCCcc---CCccccCCCCCcEEecCCCCCccCChh--hcCCCC
Q psy9862 119 AFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEV---LPAEIGNLKNLQILVLRENDLIEIPKE--LGNLTR 193 (378)
Q Consensus 119 ~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~~---l~~~l~~l~~L~~L~l~~n~~~~l~~~--l~~l~~ 193 (378)
+++.|+++.+.++.+.....-.....+++++.|++++|-+.. +......+++|+.|+++.|++...... -..+++
T Consensus 119 n~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~ 198 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSH 198 (505)
T ss_pred hHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhh
Confidence 446677777777776642211345567777777777776552 233345667777777777766532211 124556
Q ss_pred CcEEeccCCcCcccCcccccccccccccccccCCCCceeccCCccccccccccCCcCcceeecccccCCcCCCCCCCccc
Q psy9862 194 LRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWLVLRENDLIEIPKELGNLSRLRELHIQANRLTVLPPEIGNLDL 273 (378)
Q Consensus 194 L~~L~l~~~~l~~~~~~~~~l~~l~~l~~~~~~~~~~l~l~~~~l~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~~~l~~ 273 (378)
|+.|.++.|+++. . .+...+..+|+|+.|++..|..- .........
T Consensus 199 lK~L~l~~CGls~-k-------------------------------~V~~~~~~fPsl~~L~L~~N~~~--~~~~~~~~i 244 (505)
T KOG3207|consen 199 LKQLVLNSCGLSW-K-------------------------------DVQWILLTFPSLEVLYLEANEII--LIKATSTKI 244 (505)
T ss_pred hheEEeccCCCCH-H-------------------------------HHHHHHHhCCcHHHhhhhccccc--ceecchhhh
Confidence 6667777766651 0 11112334555555555555211 001111122
Q ss_pred ccccccccccCCCC--------ccCccchhhhhccCcccccc--chh-----hcCCCCCCEEEeecCCCCcCChhhccCC
Q psy9862 274 ASHKSVLKMDFNPW--------VTPIADQLQLVLRENDLIEI--PKE-----LGNLSRLRELHIQANRLTVLPPEIGNLD 338 (378)
Q Consensus 274 ~~~l~~l~l~~~~~--------~~~~~~l~~L~l~~n~l~~l--~~~-----l~~~~~L~~L~l~~n~l~~~~~~~~~l~ 338 (378)
+..|+.|++++|.+ .+.+|.+..|+++.+.++++ |++ ...+++|++|+++.|+|..++ .+.++.
T Consensus 245 ~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~-sl~~l~ 323 (505)
T KOG3207|consen 245 LQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWR-SLNHLR 323 (505)
T ss_pred hhHHhhccccCCcccccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCcccccc-ccchhh
Confidence 34445555555443 35678888888988888744 332 345688999999999987664 455666
Q ss_pred CccCcceeeccCCCCC
Q psy9862 339 LASHKSVLKMDFNPWV 354 (378)
Q Consensus 339 ~~~~l~~l~l~~n~~~ 354 (378)
.+++++.+.+..|++.
T Consensus 324 ~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 324 TLENLKHLRITLNYLN 339 (505)
T ss_pred ccchhhhhhccccccc
Confidence 6778888888888774
No 29
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.19 E-value=2.7e-11 Score=114.40 Aligned_cols=194 Identities=37% Similarity=0.534 Sum_probs=138.2
Q ss_pred cccCCcccccCCCCCCCCCcccEEEccCCCCCCCCCCcccccCc-cccEEecCCCCCccCCccccCCCCCcEEecCCCCC
Q psy9862 103 FPCRMNRLSSLPRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLE-TLRALYLGDNDFEVLPAEIGNLKNLQILVLRENDL 181 (378)
Q Consensus 103 l~l~~~~l~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~-~L~~L~l~~n~l~~l~~~l~~l~~L~~L~l~~n~~ 181 (378)
+.+..+.+..-...+...+.++.|++.++.+.+ ++....... +|+.|++++|.+..++..+..+++|+.|++++|++
T Consensus 98 l~~~~~~~~~~~~~~~~~~~l~~L~l~~n~i~~--i~~~~~~~~~nL~~L~l~~N~i~~l~~~~~~l~~L~~L~l~~N~l 175 (394)
T COG4886 98 LDLNLNRLRSNISELLELTNLTSLDLDNNNITD--IPPLIGLLKSNLKELDLSDNKIESLPSPLRNLPNLKNLDLSFNDL 175 (394)
T ss_pred eeccccccccCchhhhcccceeEEecCCccccc--CccccccchhhcccccccccchhhhhhhhhccccccccccCCchh
Confidence 455555553222334455778899999998885 455445553 89999999998888877788889999999999999
Q ss_pred ccCChhhcCCCCCcEEeccCCcCcccCcccccccccccccccccCCCCceeccCCccccccccccCCcCcceeecccccC
Q psy9862 182 IEIPKELGNLTRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWLVLRENDLIEIPKELGNLSRLRELHIQANRL 261 (378)
Q Consensus 182 ~~l~~~l~~l~~L~~L~l~~~~l~~~~~~~~~l~~l~~l~~~~~~~~~~l~l~~~~l~~l~~~l~~~~~L~~L~l~~n~l 261 (378)
..+|......+.|+.|++++|.++.+|........+.. +.+..|.+...+..+..+.++..+.+.+|++
T Consensus 176 ~~l~~~~~~~~~L~~L~ls~N~i~~l~~~~~~~~~L~~-----------l~~~~N~~~~~~~~~~~~~~l~~l~l~~n~~ 244 (394)
T COG4886 176 SDLPKLLSNLSNLNNLDLSGNKISDLPPEIELLSALEE-----------LDLSNNSIIELLSSLSNLKNLSGLELSNNKL 244 (394)
T ss_pred hhhhhhhhhhhhhhheeccCCccccCchhhhhhhhhhh-----------hhhcCCcceecchhhhhcccccccccCCcee
Confidence 88887766888899999999998888765433322332 6677776666666677888888888888877
Q ss_pred CcCCCCCCCcccccccccccccCCCCccCccchhhhhccCccccccchhhcCCCCCCEEEeecCCCCcC
Q psy9862 262 TVLPPEIGNLDLASHKSVLKMDFNPWVTPIADQLQLVLRENDLIEIPKELGNLSRLRELHIQANRLTVL 330 (378)
Q Consensus 262 ~~~~~~~~~l~~~~~l~~l~l~~~~~~~~~~~l~~L~l~~n~l~~l~~~l~~~~~L~~L~l~~n~l~~~ 330 (378)
..++..+ +..+.++.|++++|.++.++. ++...++++|++++|.+...
T Consensus 245 ~~~~~~~--------------------~~l~~l~~L~~s~n~i~~i~~-~~~~~~l~~L~~s~n~~~~~ 292 (394)
T COG4886 245 EDLPESI--------------------GNLSNLETLDLSNNQISSISS-LGSLTNLRELDLSGNSLSNA 292 (394)
T ss_pred eeccchh--------------------ccccccceecccccccccccc-ccccCccCEEeccCcccccc
Confidence 6543332 233456677777777777776 77777888888888766533
No 30
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.15 E-value=2e-11 Score=100.00 Aligned_cols=131 Identities=25% Similarity=0.379 Sum_probs=46.5
Q ss_pred CcccccccccccEEEcccccccCchhHHHHhhccccccCCccccCCCCCCCCccchhccccCCcccccCCCCCCCCCccc
Q psy9862 45 ELPGLMNMLYITRITLSHNKLKGEIIVQVIKGLSNSKYNYIPILHVTSLPILPFLFLQFPCRMNRLSSLPRGFGAFPVLE 124 (378)
Q Consensus 45 ~~~~l~~~~~L~~L~ls~~~l~~~~~~~~~~~l~~l~~~~l~~l~l~~~~~~~~l~~~l~l~~~~l~~~~~~~~~~~~L~ 124 (378)
.++.+.+...++.|++.+|.++. .+.+.. .+.+++ .+++++|.++.+. .+..++.|+
T Consensus 11 ~~~~~~n~~~~~~L~L~~n~I~~------Ie~L~~---------------~l~~L~-~L~Ls~N~I~~l~-~l~~L~~L~ 67 (175)
T PF14580_consen 11 QIAQYNNPVKLRELNLRGNQIST------IENLGA---------------TLDKLE-VLDLSNNQITKLE-GLPGLPRLK 67 (175)
T ss_dssp -------------------------------S--T---------------T-TT---EEE-TTS--S--T-T----TT--
T ss_pred ccccccccccccccccccccccc------ccchhh---------------hhcCCC-EEECCCCCCcccc-CccChhhhh
Confidence 34455566667777777776653 111110 022444 6777777777664 367788888
Q ss_pred EEEccCCCCCCCCCCccc-ccCccccEEecCCCCCccCC--ccccCCCCCcEEecCCCCCccCCh----hhcCCCCCcEE
Q psy9862 125 VLDLTYNNLNEQSLPGNF-FMLETLRALYLGDNDFEVLP--AEIGNLKNLQILVLRENDLIEIPK----ELGNLTRLREL 197 (378)
Q Consensus 125 ~L~l~~n~i~~~~~~~~l-~~l~~L~~L~l~~n~l~~l~--~~l~~l~~L~~L~l~~n~~~~l~~----~l~~l~~L~~L 197 (378)
+|++++|.+.. +...+ ..+++|++|++++|++..+. ..+..+++|+.|++.+|+++.-+. .+..+|+|+.|
T Consensus 68 ~L~L~~N~I~~--i~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~L 145 (175)
T PF14580_consen 68 TLDLSNNRISS--ISEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVL 145 (175)
T ss_dssp EEE--SS---S---CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEE
T ss_pred hcccCCCCCCc--cccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhhee
Confidence 88888888875 33334 35788888888888887442 346778889999999998885543 35778889988
Q ss_pred ecc
Q psy9862 198 HIQ 200 (378)
Q Consensus 198 ~l~ 200 (378)
|-.
T Consensus 146 D~~ 148 (175)
T PF14580_consen 146 DGQ 148 (175)
T ss_dssp TTE
T ss_pred CCE
Confidence 754
No 31
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.06 E-value=1.1e-10 Score=95.51 Aligned_cols=102 Identities=30% Similarity=0.462 Sum_probs=32.8
Q ss_pred chhccccCCcccccCCCCCC-CCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCCCccCCccc-cCCCCCcEEec
Q psy9862 99 LFLQFPCRMNRLSSLPRGFG-AFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAEI-GNLKNLQILVL 176 (378)
Q Consensus 99 l~~~l~l~~~~l~~~~~~~~-~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~~l~~~l-~~l~~L~~L~l 176 (378)
++ +|++.+|.|+.+.. +. .+.+|+.|++++|.+.. ...+..++.|+.|++++|.++.+...+ ..+++|++|++
T Consensus 21 ~~-~L~L~~n~I~~Ie~-L~~~l~~L~~L~Ls~N~I~~---l~~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~L 95 (175)
T PF14580_consen 21 LR-ELNLRGNQISTIEN-LGATLDKLEVLDLSNNQITK---LEGLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQELYL 95 (175)
T ss_dssp ----------------S---TT-TT--EEE-TTS--S-----TT----TT--EEE--SS---S-CHHHHHH-TT--EEE-
T ss_pred cc-cccccccccccccc-hhhhhcCCCEEECCCCCCcc---ccCccChhhhhhcccCCCCCCccccchHHhCCcCCEEEC
Confidence 44 67777777765532 33 45667777777777764 224556677777777777777665444 34667777777
Q ss_pred CCCCCccC--ChhhcCCCCCcEEeccCCcCc
Q psy9862 177 RENDLIEI--PKELGNLTRLRELHIQANRLT 205 (378)
Q Consensus 177 ~~n~~~~l--~~~l~~l~~L~~L~l~~~~l~ 205 (378)
++|++..+ -..+..+++|+.|++.+|+++
T Consensus 96 ~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 96 SNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred cCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 77776644 234566677777777777665
No 32
>KOG1259|consensus
Probab=98.95 E-value=2.1e-10 Score=98.70 Aligned_cols=107 Identities=22% Similarity=0.268 Sum_probs=82.8
Q ss_pred CccccEEecCCCCCccCCccccCCCCCcEEecCCCCCccCChhhcCCCCCcEEeccCCcCcccCcccccccccccccccc
Q psy9862 145 LETLRALYLGDNDFEVLPAEIGNLKNLQILVLRENDLIEIPKELGNLTRLRELHIQANRLTVLPPEIGNLDLASHKSVLK 224 (378)
Q Consensus 145 l~~L~~L~l~~n~l~~l~~~l~~l~~L~~L~l~~n~~~~l~~~l~~l~~L~~L~l~~~~l~~~~~~~~~l~~l~~l~~~~ 224 (378)
+..|+++++++|.++.+..++.-.+.++.|++++|++..+. .+..+++|+.||+++|.++++..+-.++.++..
T Consensus 283 Wq~LtelDLS~N~I~~iDESvKL~Pkir~L~lS~N~i~~v~-nLa~L~~L~~LDLS~N~Ls~~~Gwh~KLGNIKt----- 356 (490)
T KOG1259|consen 283 WQELTELDLSGNLITQIDESVKLAPKLRRLILSQNRIRTVQ-NLAELPQLQLLDLSGNLLAECVGWHLKLGNIKT----- 356 (490)
T ss_pred HhhhhhccccccchhhhhhhhhhccceeEEeccccceeeeh-hhhhcccceEeecccchhHhhhhhHhhhcCEee-----
Confidence 45688999999999888888888889999999999988774 488888999999999988866554444433333
Q ss_pred cCCCCceeccCCccccccccccCCcCcceeecccccCCcC
Q psy9862 225 MDFNPWLVLRENDLIEIPKELGNLSRLRELHIQANRLTVL 264 (378)
Q Consensus 225 ~~~~~~l~l~~~~l~~l~~~l~~~~~L~~L~l~~n~l~~~ 264 (378)
+.+.+|.+..+. .+.++-+|..||+++|+|..+
T Consensus 357 ------L~La~N~iE~LS-GL~KLYSLvnLDl~~N~Ie~l 389 (490)
T KOG1259|consen 357 ------LKLAQNKIETLS-GLRKLYSLVNLDLSSNQIEEL 389 (490)
T ss_pred ------eehhhhhHhhhh-hhHhhhhheeccccccchhhH
Confidence 777788777663 467778888999998887744
No 33
>KOG1259|consensus
Probab=98.93 E-value=1.5e-10 Score=99.52 Aligned_cols=135 Identities=25% Similarity=0.320 Sum_probs=96.8
Q ss_pred CCCCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCCCccCCccccCCCCCcEEecCCCCCccCChhhcCCCCCcE
Q psy9862 117 FGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLKNLQILVLRENDLIEIPKELGNLTRLRE 196 (378)
Q Consensus 117 ~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~~l~~~l~~l~~L~~L~l~~n~~~~l~~~l~~l~~L~~ 196 (378)
+...+.|+++|+++|.|.. +..+..-.|.++.|+++.|.+..+.. +..+++|+.||+++|.++++..+-..+-+++.
T Consensus 280 ~dTWq~LtelDLS~N~I~~--iDESvKL~Pkir~L~lS~N~i~~v~n-La~L~~L~~LDLS~N~Ls~~~Gwh~KLGNIKt 356 (490)
T KOG1259|consen 280 ADTWQELTELDLSGNLITQ--IDESVKLAPKLRRLILSQNRIRTVQN-LAELPQLQLLDLSGNLLAECVGWHLKLGNIKT 356 (490)
T ss_pred cchHhhhhhccccccchhh--hhhhhhhccceeEEeccccceeeehh-hhhcccceEeecccchhHhhhhhHhhhcCEee
Confidence 3445678888888888874 34555667788888888888776644 67778888888888888777665566777888
Q ss_pred EeccCCcCcccCcccccccccccccccccCCCCceeccCCcccccc--ccccCCcCcceeecccccCCcCCC
Q psy9862 197 LHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWLVLRENDLIEIP--KELGNLSRLRELHIQANRLTVLPP 266 (378)
Q Consensus 197 L~l~~~~l~~~~~~~~~l~~l~~l~~~~~~~~~~l~l~~~~l~~l~--~~l~~~~~L~~L~l~~n~l~~~~~ 266 (378)
|.+++|.+..+. ++.++-++.+ +|+.+|.+..+. ..++++|+|+.+.+.+|.+..++.
T Consensus 357 L~La~N~iE~LS-GL~KLYSLvn-----------LDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 357 LKLAQNKIETLS-GLRKLYSLVN-----------LDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred eehhhhhHhhhh-hhHhhhhhee-----------ccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 888888776442 2333333332 788888887543 468999999999999999886653
No 34
>KOG4658|consensus
Probab=98.91 E-value=4.2e-09 Score=107.08 Aligned_cols=194 Identities=27% Similarity=0.345 Sum_probs=128.7
Q ss_pred cccccccccccEEEcccccccCchhHHHHhhccccccCCccccCCCCCCCCccchhccccCCcc--cccCCCC-CCCCCc
Q psy9862 46 LPGLMNMLYITRITLSHNKLKGEIIVQVIKGLSNSKYNYIPILHVTSLPILPFLFLQFPCRMNR--LSSLPRG-FGAFPV 122 (378)
Q Consensus 46 ~~~l~~~~~L~~L~ls~~~l~~~~~~~~~~~l~~l~~~~l~~l~l~~~~~~~~l~~~l~l~~~~--l~~~~~~-~~~~~~ 122 (378)
.|...+....+.+.+-+|.+.. +..-+.++.++ ++-+..|. +..++.. |..++.
T Consensus 516 ~~~~~~~~~~rr~s~~~~~~~~----------------------~~~~~~~~~L~-tLll~~n~~~l~~is~~ff~~m~~ 572 (889)
T KOG4658|consen 516 IPQVKSWNSVRRMSLMNNKIEH----------------------IAGSSENPKLR-TLLLQRNSDWLLEISGEFFRSLPL 572 (889)
T ss_pred cccccchhheeEEEEeccchhh----------------------ccCCCCCCccc-eEEEeecchhhhhcCHHHHhhCcc
Confidence 3555555666777766665532 11222244566 77777775 5566555 778999
Q ss_pred ccEEEccCCCCCCCCCCcccccCccccEEecCCCCCccCCccccCCCCCcEEecCCCCCc-cCChhhcCCCCCcEEeccC
Q psy9862 123 LEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLKNLQILVLRENDLI-EIPKELGNLTRLRELHIQA 201 (378)
Q Consensus 123 L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~~l~~~l~~l~~L~~L~l~~n~~~-~l~~~l~~l~~L~~L~l~~ 201 (378)
|++||+++|.-.. .+|..++.+-+||+|+++++.+..+|..++.+..|.+|++.++..- .+|.....+.+|++|.+..
T Consensus 573 LrVLDLs~~~~l~-~LP~~I~~Li~LryL~L~~t~I~~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~ 651 (889)
T KOG4658|consen 573 LRVLDLSGNSSLS-KLPSSIGELVHLRYLDLSDTGISHLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPR 651 (889)
T ss_pred eEEEECCCCCccC-cCChHHhhhhhhhcccccCCCccccchHHHHHHhhheeccccccccccccchhhhcccccEEEeec
Confidence 9999999977655 7899999999999999999999999999999999999999987754 3355566799999998876
Q ss_pred CcCcccCcccccccccccccccccCCCC------------------ceeccCCccccccccccCCcCcceeecccccCCc
Q psy9862 202 NRLTVLPPEIGNLDLASHKSVLKMDFNP------------------WLVLRENDLIEIPKELGNLSRLRELHIQANRLTV 263 (378)
Q Consensus 202 ~~l~~~~~~~~~l~~l~~l~~~~~~~~~------------------~l~l~~~~l~~l~~~l~~~~~L~~L~l~~n~l~~ 263 (378)
.....-...+..+..++++.....+... .+...++.....+..+..+.+|+.|.+.++.+.+
T Consensus 652 s~~~~~~~~l~el~~Le~L~~ls~~~~s~~~~e~l~~~~~L~~~~~~l~~~~~~~~~~~~~~~~l~~L~~L~i~~~~~~e 731 (889)
T KOG4658|consen 652 SALSNDKLLLKELENLEHLENLSITISSVLLLEDLLGMTRLRSLLQSLSIEGCSKRTLISSLGSLGNLEELSILDCGISE 731 (889)
T ss_pred cccccchhhHHhhhcccchhhheeecchhHhHhhhhhhHHHHHHhHhhhhcccccceeecccccccCcceEEEEcCCCch
Confidence 6533112223333333333322221111 1222234444556667788888888888887763
No 35
>KOG1909|consensus
Probab=98.85 E-value=6.4e-10 Score=97.60 Aligned_cols=238 Identities=18% Similarity=0.182 Sum_probs=133.8
Q ss_pred cCCceeeccCCcccC--cCcc-cccccccccEEEcccccccCchhHHHHhhccccccCCccccCCCCCCCCccchhcccc
Q psy9862 29 KNPELELADKGLSSF--EELP-GLMNMLYITRITLSHNKLKGEIIVQVIKGLSNSKYNYIPILHVTSLPILPFLFLQFPC 105 (378)
Q Consensus 29 ~l~~L~l~~~~~~~~--~~~~-~l~~~~~L~~L~ls~~~l~~~~~~~~~~~l~~l~~~~l~~l~l~~~~~~~~l~~~l~l 105 (378)
.++.++|+||.+..- +.+. .+...+.|+..++++- ++|.....+|+++..+. . .+-.+|.++ +++|
T Consensus 31 s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~-ftGR~~~Ei~e~L~~l~-~--------aL~~~~~L~-~ldL 99 (382)
T KOG1909|consen 31 SLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDM-FTGRLKDEIPEALKMLS-K--------ALLGCPKLQ-KLDL 99 (382)
T ss_pred ceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhh-hcCCcHHHHHHHHHHHH-H--------HHhcCCcee-Eeec
Confidence 477888888887631 1122 3446667888888774 55566667777766655 2 122244566 7777
Q ss_pred CCcccc--c---CCCCCCCCCcccEEEccCCCCCCCC------------CCcccccCccccEEecCCCCCc-----cCCc
Q psy9862 106 RMNRLS--S---LPRGFGAFPVLEVLDLTYNNLNEQS------------LPGNFFMLETLRALYLGDNDFE-----VLPA 163 (378)
Q Consensus 106 ~~~~l~--~---~~~~~~~~~~L~~L~l~~n~i~~~~------------~~~~l~~l~~L~~L~l~~n~l~-----~l~~ 163 (378)
+.|.|. . +-.-+.++.+|++|++.+|++.... .......-+.|+.+..++|.+. .+..
T Consensus 100 SDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~ 179 (382)
T KOG1909|consen 100 SDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAE 179 (382)
T ss_pred cccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHH
Confidence 777766 2 2223556677777777777765310 0011233456777777777665 2333
Q ss_pred cccCCCCCcEEecCCCCCc-----cCChhhcCCCCCcEEeccCCcCcc-----cCcccccccccccccccccCCCCceec
Q psy9862 164 EIGNLKNLQILVLRENDLI-----EIPKELGNLTRLRELHIQANRLTV-----LPPEIGNLDLASHKSVLKMDFNPWLVL 233 (378)
Q Consensus 164 ~l~~l~~L~~L~l~~n~~~-----~l~~~l~~l~~L~~L~l~~~~l~~-----~~~~~~~l~~l~~l~~~~~~~~~~l~l 233 (378)
.+...+.|+.+.+..|.+. .+...+..+++|+.||+..|.++. +...+..++.++ .+++
T Consensus 180 ~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~-----------El~l 248 (382)
T KOG1909|consen 180 AFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLR-----------ELNL 248 (382)
T ss_pred HHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchhe-----------eecc
Confidence 4555667777777777665 123446667777777777776651 112222222222 2555
Q ss_pred cCCccc-----cccccc-cCCcCcceeecccccCC--cCCCCCCCcccccccccccccCCCCc
Q psy9862 234 RENDLI-----EIPKEL-GNLSRLRELHIQANRLT--VLPPEIGNLDLASHKSVLKMDFNPWV 288 (378)
Q Consensus 234 ~~~~l~-----~l~~~l-~~~~~L~~L~l~~n~l~--~~~~~~~~l~~~~~l~~l~l~~~~~~ 288 (378)
.+|.+. .+...+ ...++|+.+.+.+|.|+ ............+.|..|++++|.+.
T Consensus 249 ~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 249 GDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred cccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 566554 233332 34677778887777765 11000011122466777777777764
No 36
>KOG0531|consensus
Probab=98.71 E-value=6e-09 Score=98.82 Aligned_cols=155 Identities=26% Similarity=0.398 Sum_probs=92.9
Q ss_pred CCCCccchhccccCCcccccCCCCCCCCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCCCccCCccccCCCCCc
Q psy9862 93 LPILPFLFLQFPCRMNRLSSLPRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLKNLQ 172 (378)
Q Consensus 93 ~~~~~~l~~~l~l~~~~l~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~~l~~~l~~l~~L~ 172 (378)
+..+.++. .+++.+|.|..+...+..+++|++|++++|.|.++ ..+..++.|+.|++++|.+..+.. +..+..|+
T Consensus 91 l~~~~~l~-~l~l~~n~i~~i~~~l~~~~~L~~L~ls~N~I~~i---~~l~~l~~L~~L~l~~N~i~~~~~-~~~l~~L~ 165 (414)
T KOG0531|consen 91 LSKLKSLE-ALDLYDNKIEKIENLLSSLVNLQVLDLSFNKITKL---EGLSTLTLLKELNLSGNLISDISG-LESLKSLK 165 (414)
T ss_pred ccccccee-eeeccccchhhcccchhhhhcchheeccccccccc---cchhhccchhhheeccCcchhccC-Cccchhhh
Confidence 44566777 77777777776655466677777777777777652 234555667777777777765533 33467777
Q ss_pred EEecCCCCCccCChh-hcCCCCCcEEeccCCcCcccCcccccccccccccccccCCCCceeccCCccccccccccCCc--
Q psy9862 173 ILVLRENDLIEIPKE-LGNLTRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWLVLRENDLIEIPKELGNLS-- 249 (378)
Q Consensus 173 ~L~l~~n~~~~l~~~-l~~l~~L~~L~l~~~~l~~~~~~~~~l~~l~~l~~~~~~~~~~l~l~~~~l~~l~~~l~~~~-- 249 (378)
.+++++|.+..+... ...+.+++.+++.+|.+..+.. +..+..+.. +++..|.+..+.. +..+.
T Consensus 166 ~l~l~~n~i~~ie~~~~~~~~~l~~l~l~~n~i~~i~~-~~~~~~l~~-----------~~l~~n~i~~~~~-l~~~~~~ 232 (414)
T KOG0531|consen 166 LLDLSYNRIVDIENDELSELISLEELDLGGNSIREIEG-LDLLKKLVL-----------LSLLDNKISKLEG-LNELVML 232 (414)
T ss_pred cccCCcchhhhhhhhhhhhccchHHHhccCCchhcccc-hHHHHHHHH-----------hhcccccceeccC-cccchhH
Confidence 777777777766433 4666777777777776653321 111111111 3445555543322 12222
Q ss_pred CcceeecccccCCcCC
Q psy9862 250 RLRELHIQANRLTVLP 265 (378)
Q Consensus 250 ~L~~L~l~~n~l~~~~ 265 (378)
+|+.+++.+|.+...+
T Consensus 233 ~L~~l~l~~n~i~~~~ 248 (414)
T KOG0531|consen 233 HLRELYLSGNRISRSP 248 (414)
T ss_pred HHHHHhcccCcccccc
Confidence 3777777777776554
No 37
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.63 E-value=7.1e-09 Score=88.20 Aligned_cols=185 Identities=21% Similarity=0.264 Sum_probs=111.8
Q ss_pred CCCCCcccEEEccCCCCCCCCCCc----ccccCccccEEecCCCCCccCCc-----c---------ccCCCCCcEEecCC
Q psy9862 117 FGAFPVLEVLDLTYNNLNEQSLPG----NFFMLETLRALYLGDNDFEVLPA-----E---------IGNLKNLQILVLRE 178 (378)
Q Consensus 117 ~~~~~~L~~L~l~~n~i~~~~~~~----~l~~l~~L~~L~l~~n~l~~l~~-----~---------l~~l~~L~~L~l~~ 178 (378)
+.++|.++..++++|.+.. .++. .++.-+.|++|.+++|.++.+.. + ...-+.|++.....
T Consensus 88 Llkcp~l~~v~LSDNAfg~-~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgr 166 (388)
T COG5238 88 LLKCPRLQKVDLSDNAFGS-EFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGR 166 (388)
T ss_pred HhcCCcceeeeccccccCc-ccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEecc
Confidence 4567778888888887765 3332 24556678888888887763321 1 23457788889888
Q ss_pred CCCccCChh-----hcCCCCCcEEeccCCcCcccCcccccccccccccccccCCCCceeccCCccc-----cccccccCC
Q psy9862 179 NDLIEIPKE-----LGNLTRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWLVLRENDLI-----EIPKELGNL 248 (378)
Q Consensus 179 n~~~~l~~~-----l~~l~~L~~L~l~~~~l~~~~~~~~~l~~l~~l~~~~~~~~~~l~l~~~~l~-----~l~~~l~~~ 248 (378)
|++...+.. +..-.+|+.+.+..|++. |.++..+. .........+..+++++|.++ .+...+..+
T Consensus 167 NRlengs~~~~a~~l~sh~~lk~vki~qNgIr--pegv~~L~---~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W 241 (388)
T COG5238 167 NRLENGSKELSAALLESHENLKEVKIQQNGIR--PEGVTMLA---FLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEW 241 (388)
T ss_pred chhccCcHHHHHHHHHhhcCceeEEeeecCcC--cchhHHHH---HHHHHHhCcceeeeccccchhhhhHHHHHHHhccc
Confidence 888754432 444468888888888875 22221111 112233344555888888886 344567788
Q ss_pred cCcceeecccccCCc--CCCCCCCcc--cccccccccccCCCCc--------------cCccchhhhhccCcccccc
Q psy9862 249 SRLRELHIQANRLTV--LPPEIGNLD--LASHKSVLKMDFNPWV--------------TPIADQLQLVLRENDLIEI 307 (378)
Q Consensus 249 ~~L~~L~l~~n~l~~--~~~~~~~l~--~~~~l~~l~l~~~~~~--------------~~~~~l~~L~l~~n~l~~l 307 (378)
+.|++|.+.+|-++. ....+..+. ..++|..|..+.|... +..|.+..|.+.||++.+.
T Consensus 242 ~~lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~i~~~~l~~~e~~~~p~L~~le~ngNr~~E~ 318 (388)
T COG5238 242 NLLRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRGGIILDISLNEFEQDAVPLLVDLERNGNRIKEL 318 (388)
T ss_pred chhhhccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcCceeeeechhhhhhcccHHHHHHHHccCcchhH
Confidence 889999999997761 111122221 2345555555555432 2455566677777777644
No 38
>KOG0531|consensus
Probab=98.62 E-value=9.6e-09 Score=97.44 Aligned_cols=241 Identities=24% Similarity=0.270 Sum_probs=142.5
Q ss_pred CccchhccccCCcccccCCCCCCCCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCCCccCCccccCCCCCcEEe
Q psy9862 96 LPFLFLQFPCRMNRLSSLPRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLKNLQILV 175 (378)
Q Consensus 96 ~~~l~~~l~l~~~~l~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~~l~~~l~~l~~L~~L~ 175 (378)
+..+. .+.+..|.+..+-..+..++++..|++.+|.+.. +...+..+++|++|++++|.++.+.. +..+..|+.|+
T Consensus 71 l~~l~-~l~l~~n~i~~~~~~l~~~~~l~~l~l~~n~i~~--i~~~l~~~~~L~~L~ls~N~I~~i~~-l~~l~~L~~L~ 146 (414)
T KOG0531|consen 71 LTSLK-ELNLRQNLIAKILNHLSKLKSLEALDLYDNKIEK--IENLLSSLVNLQVLDLSFNKITKLEG-LSTLTLLKELN 146 (414)
T ss_pred hHhHH-hhccchhhhhhhhcccccccceeeeeccccchhh--cccchhhhhcchheeccccccccccc-hhhccchhhhe
Confidence 44556 6777888877644447778889999999999875 23336778889999999998886643 45666688999
Q ss_pred cCCCCCccCChhhcCCCCCcEEeccCCcCcccCcc-cccccccccccccccCCCCceeccCCccccccccccCCcCccee
Q psy9862 176 LRENDLIEIPKELGNLTRLRELHIQANRLTVLPPE-IGNLDLASHKSVLKMDFNPWLVLRENDLIEIPKELGNLSRLREL 254 (378)
Q Consensus 176 l~~n~~~~l~~~l~~l~~L~~L~l~~~~l~~~~~~-~~~l~~l~~l~~~~~~~~~~l~l~~~~l~~l~~~l~~~~~L~~L 254 (378)
+.+|.++.+. .+..++.|+.+++++|.+..++.. ...+..++ .+.+..|.+..+. .+..+..+..+
T Consensus 147 l~~N~i~~~~-~~~~l~~L~~l~l~~n~i~~ie~~~~~~~~~l~-----------~l~l~~n~i~~i~-~~~~~~~l~~~ 213 (414)
T KOG0531|consen 147 LSGNLISDIS-GLESLKSLKLLDLSYNRIVDIENDELSELISLE-----------ELDLGGNSIREIE-GLDLLKKLVLL 213 (414)
T ss_pred eccCcchhcc-CCccchhhhcccCCcchhhhhhhhhhhhccchH-----------HHhccCCchhccc-chHHHHHHHHh
Confidence 9999988764 455578888888888888765432 12222222 2555556555442 23333444444
Q ss_pred ecccccCCcCCCCCCCccccc--ccccccccCCCCcc------CccchhhhhccCccccccchhhcCCCCCCEEEeecCC
Q psy9862 255 HIQANRLTVLPPEIGNLDLAS--HKSVLKMDFNPWVT------PIADQLQLVLRENDLIEIPKELGNLSRLRELHIQANR 326 (378)
Q Consensus 255 ~l~~n~l~~~~~~~~~l~~~~--~l~~l~l~~~~~~~------~~~~l~~L~l~~n~l~~l~~~l~~~~~L~~L~l~~n~ 326 (378)
++..|.+..+-. +..+. +|+.+++.+|.+.. .+..+..+++..|++..+.. +.....+..+....|.
T Consensus 214 ~l~~n~i~~~~~----l~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~l~~l~~~~n~~~~~~~-~~~~~~~~~~~~~~~~ 288 (414)
T KOG0531|consen 214 SLLDNKISKLEG----LNELVMLHLRELYLSGNRISRSPEGLENLKNLPVLDLSSNRISNLEG-LERLPKLSELWLNDNK 288 (414)
T ss_pred hcccccceeccC----cccchhHHHHHHhcccCccccccccccccccccccchhhcccccccc-ccccchHHHhccCcch
Confidence 666666653322 11111 24555555555432 23444556666665554432 3334455555555555
Q ss_pred CCcCChhhcc--CCCccCcceeeccCCCCCccch
Q psy9862 327 LTVLPPEIGN--LDLASHKSVLKMDFNPWVTPIA 358 (378)
Q Consensus 327 l~~~~~~~~~--l~~~~~l~~l~l~~n~~~~~~~ 358 (378)
+......... ....+.+..+.+.+|+....-+
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 289 LALSEAISQEYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred hcchhhhhccccccccccccccccccCccccccc
Confidence 4422222211 2334577777777777655443
No 39
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.62 E-value=1.5e-08 Score=68.29 Aligned_cols=60 Identities=30% Similarity=0.455 Sum_probs=52.2
Q ss_pred cchhhhhccCccccccch-hhcCCCCCCEEEeecCCCCcCChhhccCCCccCcceeeccCCCC
Q psy9862 292 ADQLQLVLRENDLIEIPK-ELGNLSRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPW 353 (378)
Q Consensus 292 ~~l~~L~l~~n~l~~l~~-~l~~~~~L~~L~l~~n~l~~~~~~~~~l~~~~~l~~l~l~~n~~ 353 (378)
|+++.|++++|++++++. ++..+++|++|++++|+++.+++.. +..+++|+++++++|++
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~--f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDA--FSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTT--TTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHH--HcCCCCCCEEeCcCCcC
Confidence 467889999999999985 5788999999999999999888754 66667999999999975
No 40
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.54 E-value=4.9e-08 Score=65.72 Aligned_cols=55 Identities=38% Similarity=0.583 Sum_probs=31.9
Q ss_pred ccccCCcccccCCCC-CCCCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCC
Q psy9862 102 QFPCRMNRLSSLPRG-FGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDND 157 (378)
Q Consensus 102 ~l~l~~~~l~~~~~~-~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~ 157 (378)
++++++|+++.++.. |.++++|++|++++|.+... .+..|.++++|++|++++|+
T Consensus 5 ~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i-~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 5 SLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSI-PPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp EEEETSSTESEECTTTTTTGTTESEEEETSSSESEE-ETTTTTTSTTESEEEETSSS
T ss_pred EEECCCCCCCccCHHHHcCCCCCCEeEccCCccCcc-CHHHHcCCCCCCEEeCcCCc
Confidence 566666666655543 55666666666666666542 23455666666666666654
No 41
>KOG1859|consensus
Probab=98.53 E-value=1.4e-09 Score=103.96 Aligned_cols=102 Identities=27% Similarity=0.292 Sum_probs=69.9
Q ss_pred eeccCCccccccccccCCcCcceeecccccCCcCCCCCCCcccccccccccccCCCCccCccchhhhhccCccccccchh
Q psy9862 231 LVLRENDLIEIPKELGNLSRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWVTPIADQLQLVLRENDLIEIPKE 310 (378)
Q Consensus 231 l~l~~~~l~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~~~l~~~~~l~~l~l~~~~~~~~~~~l~~L~l~~n~l~~l~~~ 310 (378)
|+++.|++..+. .+..++.|++||+++|.++.+|.. ...-+.+..|.+++|.++++. .
T Consensus 192 LnLshNk~~~v~-~Lr~l~~LkhLDlsyN~L~~vp~l--------------------~~~gc~L~~L~lrnN~l~tL~-g 249 (1096)
T KOG1859|consen 192 LNLSHNKFTKVD-NLRRLPKLKHLDLSYNCLRHVPQL--------------------SMVGCKLQLLNLRNNALTTLR-G 249 (1096)
T ss_pred hccchhhhhhhH-HHHhcccccccccccchhcccccc--------------------chhhhhheeeeecccHHHhhh-h
Confidence 444444444443 466778888888888887766642 112234667788888888775 4
Q ss_pred hcCCCCCCEEEeecCCCCcCChhhccCCCccCcceeeccCCCCCc
Q psy9862 311 LGNLSRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWVT 355 (378)
Q Consensus 311 l~~~~~L~~L~l~~n~l~~~~~~~~~l~~~~~l~~l~l~~n~~~~ 355 (378)
+.++.+|+.||+++|.|.+.- .+.-+..+..|+.|.+.|||+.+
T Consensus 250 ie~LksL~~LDlsyNll~~hs-eL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 250 IENLKSLYGLDLSYNLLSEHS-ELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred HHhhhhhhccchhHhhhhcch-hhhHHHHHHHHHHHhhcCCcccc
Confidence 778899999999999887442 22334455689999999999743
No 42
>KOG1859|consensus
Probab=98.49 E-value=5.3e-09 Score=100.03 Aligned_cols=152 Identities=23% Similarity=0.300 Sum_probs=101.7
Q ss_pred cccccccccEEEcccccccC-chhHHHHhhccccccC-Ccccc---------CCCCCCCCccchhccccCCcccccCCCC
Q psy9862 48 GLMNMLYITRITLSHNKLKG-EIIVQVIKGLSNSKYN-YIPIL---------HVTSLPILPFLFLQFPCRMNRLSSLPRG 116 (378)
Q Consensus 48 ~l~~~~~L~~L~ls~~~l~~-~~~~~~~~~l~~l~~~-~l~~l---------~l~~~~~~~~l~~~l~l~~~~l~~~~~~ 116 (378)
++.-+..|++|.+.++.+.. .+...+-..+.++-+. .++.+ ++.+-+....+. ..++++|.+..+...
T Consensus 104 ~ifpF~sLr~LElrg~~L~~~~GL~~lr~qLe~LIC~~Sl~Al~~v~ascggd~~ns~~Wn~L~-~a~fsyN~L~~mD~S 182 (1096)
T KOG1859|consen 104 SIFPFRSLRVLELRGCDLSTAKGLQELRHQLEKLICHNSLDALRHVFASCGGDISNSPVWNKLA-TASFSYNRLVLMDES 182 (1096)
T ss_pred eeccccceeeEEecCcchhhhhhhHHHHHhhhhhhhhccHHHHHHHHHHhccccccchhhhhHh-hhhcchhhHHhHHHH
Confidence 46678899999999998764 1333333333333311 01111 222333356666 778888888777666
Q ss_pred CCCCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCCCccCCccc-cCCCCCcEEecCCCCCccCChhhcCCCCCc
Q psy9862 117 FGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAEI-GNLKNLQILVLRENDLIEIPKELGNLTRLR 195 (378)
Q Consensus 117 ~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~~l~~~l-~~l~~L~~L~l~~n~~~~l~~~l~~l~~L~ 195 (378)
+.-++.++.|++++|++++ ...+..+++|++|+++.|++..+|..- ..+ .|+.|.+++|-++++ ..+.++++|+
T Consensus 183 Lqll~ale~LnLshNk~~~---v~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc-~L~~L~lrnN~l~tL-~gie~LksL~ 257 (1096)
T KOG1859|consen 183 LQLLPALESLNLSHNKFTK---VDNLRRLPKLKHLDLSYNCLRHVPQLSMVGC-KLQLLNLRNNALTTL-RGIENLKSLY 257 (1096)
T ss_pred HHHHHHhhhhccchhhhhh---hHHHHhcccccccccccchhccccccchhhh-hheeeeecccHHHhh-hhHHhhhhhh
Confidence 7777888888888888875 236778888888888888888776532 222 388888888887766 3567778888
Q ss_pred EEeccCCcCc
Q psy9862 196 ELHIQANRLT 205 (378)
Q Consensus 196 ~L~l~~~~l~ 205 (378)
.||+++|-+.
T Consensus 258 ~LDlsyNll~ 267 (1096)
T KOG1859|consen 258 GLDLSYNLLS 267 (1096)
T ss_pred ccchhHhhhh
Confidence 8888887665
No 43
>PLN03150 hypothetical protein; Provisional
Probab=98.43 E-value=4.7e-07 Score=90.09 Aligned_cols=91 Identities=30% Similarity=0.560 Sum_probs=78.3
Q ss_pred cccEEEccCCCCCCCCCCcccccCccccEEecCCCCCc-cCCccccCCCCCcEEecCCCCCc-cCChhhcCCCCCcEEec
Q psy9862 122 VLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFE-VLPAEIGNLKNLQILVLRENDLI-EIPKELGNLTRLRELHI 199 (378)
Q Consensus 122 ~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~-~l~~~l~~l~~L~~L~l~~n~~~-~l~~~l~~l~~L~~L~l 199 (378)
.++.|++++|.+.+ .+|..+..+++|+.|++++|.+. .+|..++.+++|+.|++++|.+. .+|..+..+++|+.|++
T Consensus 419 ~v~~L~L~~n~L~g-~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~L 497 (623)
T PLN03150 419 FIDGLGLDNQGLRG-FIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNL 497 (623)
T ss_pred EEEEEECCCCCccc-cCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEEC
Confidence 47889999999876 66778888999999999999987 78888899999999999999988 67888999999999999
Q ss_pred cCCcCc-ccCccccc
Q psy9862 200 QANRLT-VLPPEIGN 213 (378)
Q Consensus 200 ~~~~l~-~~~~~~~~ 213 (378)
++|.++ .+|..+..
T Consensus 498 s~N~l~g~iP~~l~~ 512 (623)
T PLN03150 498 NGNSLSGRVPAALGG 512 (623)
T ss_pred cCCcccccCChHHhh
Confidence 999888 67766543
No 44
>KOG4658|consensus
Probab=98.43 E-value=4.1e-07 Score=92.81 Aligned_cols=104 Identities=29% Similarity=0.368 Sum_probs=64.9
Q ss_pred cchhccccCCcccccCCCCCCCCCcccEEEccCCC--CCCCCCCcccccCccccEEecCCCC-CccCCccccCCCCCcEE
Q psy9862 98 FLFLQFPCRMNRLSSLPRGFGAFPVLEVLDLTYNN--LNEQSLPGNFFMLETLRALYLGDND-FEVLPAEIGNLKNLQIL 174 (378)
Q Consensus 98 ~l~~~l~l~~~~l~~~~~~~~~~~~L~~L~l~~n~--i~~~~~~~~l~~l~~L~~L~l~~n~-l~~l~~~l~~l~~L~~L 174 (378)
..+ .+.+-+|.+..++.... .+.|++|-+.+|. +.. .....|..++.|+.|++++|. +..+|+.++.+-+|++|
T Consensus 524 ~~r-r~s~~~~~~~~~~~~~~-~~~L~tLll~~n~~~l~~-is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL 600 (889)
T KOG4658|consen 524 SVR-RMSLMNNKIEHIAGSSE-NPKLRTLLLQRNSDWLLE-ISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYL 600 (889)
T ss_pred hee-EEEEeccchhhccCCCC-CCccceEEEeecchhhhh-cCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcc
Confidence 334 55555566555554432 3457777777765 322 112336667777777777653 44677777777777777
Q ss_pred ecCCCCCccCChhhcCCCCCcEEeccCCcC
Q psy9862 175 VLRENDLIEIPKELGNLTRLRELHIQANRL 204 (378)
Q Consensus 175 ~l~~n~~~~l~~~l~~l~~L~~L~l~~~~l 204 (378)
+++++.+..+|..+.+++.|.+|++..+..
T Consensus 601 ~L~~t~I~~LP~~l~~Lk~L~~Lnl~~~~~ 630 (889)
T KOG4658|consen 601 DLSDTGISHLPSGLGNLKKLIYLNLEVTGR 630 (889)
T ss_pred cccCCCccccchHHHHHHhhheeccccccc
Confidence 777777777777777777777777766543
No 45
>KOG2982|consensus
Probab=98.41 E-value=5.2e-08 Score=84.07 Aligned_cols=41 Identities=22% Similarity=0.334 Sum_probs=32.8
Q ss_pred ccCccchhhhhccCccccccc--hhhcCCCCCCEEEeecCCCC
Q psy9862 288 VTPIADQLQLVLRENDLIEIP--KELGNLSRLRELHIQANRLT 328 (378)
Q Consensus 288 ~~~~~~l~~L~l~~n~l~~l~--~~l~~~~~L~~L~l~~n~l~ 328 (378)
..++|.+--|+++.+.+..+. .++..++.|.-|.++++.+.
T Consensus 220 se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~ 262 (418)
T KOG2982|consen 220 SEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLS 262 (418)
T ss_pred CCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCccc
Confidence 446677778899999988664 45788999999999999876
No 46
>KOG4579|consensus
Probab=98.35 E-value=1e-07 Score=72.99 Aligned_cols=101 Identities=24% Similarity=0.333 Sum_probs=65.7
Q ss_pred eeccCCcccccc---ccccCCcCcceeecccccCCcCCCCCCCcccccccccccccCCCCccCccchhhhhccCcccccc
Q psy9862 231 LVLRENDLIEIP---KELGNLSRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWVTPIADQLQLVLRENDLIEI 307 (378)
Q Consensus 231 l~l~~~~l~~l~---~~l~~~~~L~~L~l~~n~l~~~~~~~~~l~~~~~l~~l~l~~~~~~~~~~~l~~L~l~~n~l~~l 307 (378)
+++++|++..++ ..+.+...|...++++|.+..+|+.+ +..+|.++.|++++|.+.++
T Consensus 32 ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk~fp~kf-------------------t~kf~t~t~lNl~~neisdv 92 (177)
T KOG4579|consen 32 LDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFKKFPKKF-------------------TIKFPTATTLNLANNEISDV 92 (177)
T ss_pred cccccchhhHHHHHHHHHhCCceEEEEecccchhhhCCHHH-------------------hhccchhhhhhcchhhhhhc
Confidence 556666554333 33455556667777777777777643 44556667777777777777
Q ss_pred chhhcCCCCCCEEEeecCCCCcCChhhccCCCccCcceeeccCCCC
Q psy9862 308 PKELGNLSRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPW 353 (378)
Q Consensus 308 ~~~l~~~~~L~~L~l~~n~l~~~~~~~~~l~~~~~l~~l~l~~n~~ 353 (378)
|+++..++.|+.|+++.|.+...|..+..+. ++-+|+..+|.+
T Consensus 93 PeE~Aam~aLr~lNl~~N~l~~~p~vi~~L~---~l~~Lds~~na~ 135 (177)
T KOG4579|consen 93 PEELAAMPALRSLNLRFNPLNAEPRVIAPLI---KLDMLDSPENAR 135 (177)
T ss_pred hHHHhhhHHhhhcccccCccccchHHHHHHH---hHHHhcCCCCcc
Confidence 7777777777777777777776666654433 666666666654
No 47
>PLN03150 hypothetical protein; Provisional
Probab=98.31 E-value=1.4e-06 Score=86.79 Aligned_cols=105 Identities=27% Similarity=0.439 Sum_probs=86.0
Q ss_pred cccEEecCCCCCc-cCCccccCCCCCcEEecCCCCCc-cCChhhcCCCCCcEEeccCCcCc-ccCccccccccccccccc
Q psy9862 147 TLRALYLGDNDFE-VLPAEIGNLKNLQILVLRENDLI-EIPKELGNLTRLRELHIQANRLT-VLPPEIGNLDLASHKSVL 223 (378)
Q Consensus 147 ~L~~L~l~~n~l~-~l~~~l~~l~~L~~L~l~~n~~~-~l~~~l~~l~~L~~L~l~~~~l~-~~~~~~~~l~~l~~l~~~ 223 (378)
.++.|++++|.+. .+|..++.+++|+.|++++|.+. .+|..+..+++|+.|++++|.++ .+|..++.+..++.
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~---- 494 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRI---- 494 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCE----
Confidence 4788999999987 78888999999999999999998 67888999999999999999998 67777776665554
Q ss_pred ccCCCCceeccCCccc-cccccccCC-cCcceeecccccCC
Q psy9862 224 KMDFNPWLVLRENDLI-EIPKELGNL-SRLRELHIQANRLT 262 (378)
Q Consensus 224 ~~~~~~~l~l~~~~l~-~l~~~l~~~-~~L~~L~l~~n~l~ 262 (378)
+++++|.+. .+|..+... .++..+++.+|...
T Consensus 495 -------L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N~~l 528 (623)
T PLN03150 495 -------LNLNGNSLSGRVPAALGGRLLHRASFNFTDNAGL 528 (623)
T ss_pred -------EECcCCcccccCChHHhhccccCceEEecCCccc
Confidence 889999886 777776543 46778888887543
No 48
>KOG2120|consensus
Probab=98.29 E-value=1.8e-08 Score=86.96 Aligned_cols=170 Identities=18% Similarity=0.150 Sum_probs=102.3
Q ss_pred ccEEecCCCCCc--cCCccccCCCCCcEEecCCCCCc-cCChhhcCCCCCcEEeccCC-cCcccCccccccccccccccc
Q psy9862 148 LRALYLGDNDFE--VLPAEIGNLKNLQILVLRENDLI-EIPKELGNLTRLRELHIQAN-RLTVLPPEIGNLDLASHKSVL 223 (378)
Q Consensus 148 L~~L~l~~n~l~--~l~~~l~~l~~L~~L~l~~n~~~-~l~~~l~~l~~L~~L~l~~~-~l~~~~~~~~~l~~l~~l~~~ 223 (378)
|+++++++..++ .+-..++.+.+|+.|.+.+++++ .+...+....+|+.++++++ ++++..
T Consensus 187 lq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~--------------- 251 (419)
T KOG2120|consen 187 LQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENA--------------- 251 (419)
T ss_pred hHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhH---------------
Confidence 666777766665 23333456666667777666665 23344555666777766654 232111
Q ss_pred ccCCCCceeccCCccccccccccCCcCcceeecccccCC--cCCCCCCCcccccccccccccCCC----------CccCc
Q psy9862 224 KMDFNPWLVLRENDLIEIPKELGNLSRLRELHIQANRLT--VLPPEIGNLDLASHKSVLKMDFNP----------WVTPI 291 (378)
Q Consensus 224 ~~~~~~~l~l~~~~l~~l~~~l~~~~~L~~L~l~~n~l~--~~~~~~~~l~~~~~l~~l~l~~~~----------~~~~~ 291 (378)
+...+.+|+.|++|++++|.+. .+...+... .+.++.|++++.. +...+
T Consensus 252 -----------------~~ll~~scs~L~~LNlsWc~l~~~~Vtv~V~hi--se~l~~LNlsG~rrnl~~sh~~tL~~rc 312 (419)
T KOG2120|consen 252 -----------------LQLLLSSCSRLDELNLSWCFLFTEKVTVAVAHI--SETLTQLNLSGYRRNLQKSHLSTLVRRC 312 (419)
T ss_pred -----------------HHHHHHhhhhHhhcCchHhhccchhhhHHHhhh--chhhhhhhhhhhHhhhhhhHHHHHHHhC
Confidence 1122567888888888888665 211111111 2445555555431 24577
Q ss_pred cchhhhhccCcc-cc-ccchhhcCCCCCCEEEeecCCCCcCChhhccCCCccCcceeeccCCC
Q psy9862 292 ADQLQLVLREND-LI-EIPKELGNLSRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNP 352 (378)
Q Consensus 292 ~~l~~L~l~~n~-l~-~l~~~l~~~~~L~~L~l~~n~l~~~~~~~~~l~~~~~l~~l~l~~n~ 352 (378)
|.+..||+++|- ++ .+..++..++.|++|.++.|..- +|..+-++...+.+.+|++.|+-
T Consensus 313 p~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSlsRCY~i-~p~~~~~l~s~psl~yLdv~g~v 374 (419)
T KOG2120|consen 313 PNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSLSRCYDI-IPETLLELNSKPSLVYLDVFGCV 374 (419)
T ss_pred CceeeeccccccccCchHHHHHHhcchheeeehhhhcCC-ChHHeeeeccCcceEEEEecccc
Confidence 888899999764 44 44556778889999999988321 23444456666799999987764
No 49
>KOG2982|consensus
Probab=98.28 E-value=4.7e-07 Score=78.33 Aligned_cols=201 Identities=17% Similarity=0.108 Sum_probs=103.0
Q ss_pred ceeeccCCcccCcCccccc-ccccccEEEcccccccCchhHHHHhhccccccCCccccCCCCCCCCccchhccccCCccc
Q psy9862 32 ELELADKGLSSFEELPGLM-NMLYITRITLSHNKLKGEIIVQVIKGLSNSKYNYIPILHVTSLPILPFLFLQFPCRMNRL 110 (378)
Q Consensus 32 ~L~l~~~~~~~~~~~~~l~-~~~~L~~L~ls~~~l~~~~~~~~~~~l~~l~~~~l~~l~l~~~~~~~~l~~~l~l~~~~l 110 (378)
-+.+.++.|...+....+. .+++++.+|+.+|.+++.. ++..-+++ +|.++ .+++++|++
T Consensus 49 llvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWs--eI~~ile~----------------lP~l~-~LNls~N~L 109 (418)
T KOG2982|consen 49 LLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWS--EIGAILEQ----------------LPALT-TLNLSCNSL 109 (418)
T ss_pred hheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHH--HHHHHHhc----------------Cccce-EeeccCCcC
Confidence 3444555555444333344 5566666777776665521 22222222 22344 666666666
Q ss_pred ccCCCCC-CCCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCCCcc--C-CccccCC-CCCcEEecCCCCCc---
Q psy9862 111 SSLPRGF-GAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEV--L-PAEIGNL-KNLQILVLRENDLI--- 182 (378)
Q Consensus 111 ~~~~~~~-~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~~--l-~~~l~~l-~~L~~L~l~~n~~~--- 182 (378)
...-... .-..+|++|.+.|..+.+......+..+|.++.|+++.|.+.. + ....... +.++++.+..|...
T Consensus 110 ~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~ 189 (418)
T KOG2982|consen 110 SSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWL 189 (418)
T ss_pred CCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHH
Confidence 5221111 2345777777777777665445556667777777777774331 1 1111111 24555555555432
Q ss_pred cCChhhcCCCCCcEEeccCCcCcccC--cccccccccccccccccCCCCceeccCCcccccc--ccccCCcCcceeeccc
Q psy9862 183 EIPKELGNLTRLRELHIQANRLTVLP--PEIGNLDLASHKSVLKMDFNPWLVLRENDLIEIP--KELGNLSRLRELHIQA 258 (378)
Q Consensus 183 ~l~~~l~~l~~L~~L~l~~~~l~~~~--~~~~~l~~l~~l~~~~~~~~~~l~l~~~~l~~l~--~~l~~~~~L~~L~l~~ 258 (378)
..-..-.-.+++..+.+..|.+.... .+... +....++++..+.+.... ..+.+++.|+.|.+.+
T Consensus 190 ~~~~l~r~Fpnv~sv~v~e~PlK~~s~ek~se~-----------~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~ 258 (418)
T KOG2982|consen 190 NKNKLSRIFPNVNSVFVCEGPLKTESSEKGSEP-----------FPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSE 258 (418)
T ss_pred HHHhHHhhcccchheeeecCcccchhhcccCCC-----------CCcchhhhhcccccccHHHHHHHcCCchhheeeccC
Confidence 11111133456666666666554221 11111 112224777777776443 3477888888888887
Q ss_pred ccCC
Q psy9862 259 NRLT 262 (378)
Q Consensus 259 n~l~ 262 (378)
+.+.
T Consensus 259 ~Pl~ 262 (418)
T KOG2982|consen 259 NPLS 262 (418)
T ss_pred Cccc
Confidence 7665
No 50
>KOG4579|consensus
Probab=98.23 E-value=7e-08 Score=73.88 Aligned_cols=136 Identities=20% Similarity=0.305 Sum_probs=73.8
Q ss_pred CCcEEecCCCCCccCChhh---cCCCCCcEEeccCCcCcccCcccccccccccccccccCCCCceeccCCcccccccccc
Q psy9862 170 NLQILVLRENDLIEIPKEL---GNLTRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWLVLRENDLIEIPKELG 246 (378)
Q Consensus 170 ~L~~L~l~~n~~~~l~~~l---~~l~~L~~L~l~~~~l~~~~~~~~~l~~l~~l~~~~~~~~~~l~l~~~~l~~l~~~l~ 246 (378)
.+..++++.+.+..+++.. .....|+.+++++|.+.++|+.+... +...+.+++..|.++.+|..+.
T Consensus 28 E~h~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~k----------f~t~t~lNl~~neisdvPeE~A 97 (177)
T KOG4579|consen 28 ELHFLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIK----------FPTATTLNLANNEISDVPEELA 97 (177)
T ss_pred HhhhcccccchhhHHHHHHHHHhCCceEEEEecccchhhhCCHHHhhc----------cchhhhhhcchhhhhhchHHHh
Confidence 3455677777776555443 44455666677777777666543211 1112225555555555555555
Q ss_pred CCcCcceeecccccCCcCCCCCCCcccccccccccccCCCCccCccchhhhhccCccccccchhhcCCCCCCEEEeecCC
Q psy9862 247 NLSRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWVTPIADQLQLVLRENDLIEIPKELGNLSRLRELHIQANR 326 (378)
Q Consensus 247 ~~~~L~~L~l~~n~l~~~~~~~~~l~~~~~l~~l~l~~~~~~~~~~~l~~L~l~~n~l~~l~~~l~~~~~L~~L~l~~n~ 326 (378)
.++.|+.++++.|.+... |..+..+.++..||..+|.
T Consensus 98 am~aLr~lNl~~N~l~~~-------------------------------------------p~vi~~L~~l~~Lds~~na 134 (177)
T KOG4579|consen 98 AMPALRSLNLRFNPLNAE-------------------------------------------PRVIAPLIKLDMLDSPENA 134 (177)
T ss_pred hhHHhhhcccccCccccc-------------------------------------------hHHHHHHHhHHHhcCCCCc
Confidence 555555555555555444 3344445666666666666
Q ss_pred CCcCChhhccCCCccCcceeeccCCCCCccchHHh
Q psy9862 327 LTVLPPEIGNLDLASHKSVLKMDFNPWVTPIADQL 361 (378)
Q Consensus 327 l~~~~~~~~~l~~~~~l~~l~l~~n~~~~~~~~~~ 361 (378)
+..+|..+. .+. ..-.+++.++++.+..+...
T Consensus 135 ~~eid~dl~-~s~--~~al~~lgnepl~~~~~~kl 166 (177)
T KOG4579|consen 135 RAEIDVDLF-YSS--LPALIKLGNEPLGDETKKKL 166 (177)
T ss_pred cccCcHHHh-ccc--cHHHHHhcCCcccccCcccc
Confidence 666665532 122 33334556777766665443
No 51
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.12 E-value=1.9e-06 Score=53.32 Aligned_cols=37 Identities=30% Similarity=0.526 Sum_probs=18.9
Q ss_pred hhhhhccCccccccchhhcCCCCCCEEEeecCCCCcC
Q psy9862 294 QLQLVLRENDLIEIPKELGNLSRLRELHIQANRLTVL 330 (378)
Q Consensus 294 l~~L~l~~n~l~~l~~~l~~~~~L~~L~l~~n~l~~~ 330 (378)
++.|++++|.++++|..++.+++|++|++++|+|+.+
T Consensus 3 L~~L~l~~N~i~~l~~~l~~l~~L~~L~l~~N~i~~i 39 (44)
T PF12799_consen 3 LEELDLSNNQITDLPPELSNLPNLETLNLSNNPISDI 39 (44)
T ss_dssp -SEEEETSSS-SSHGGHGTTCTTSSEEEETSSCCSBE
T ss_pred ceEEEccCCCCcccCchHhCCCCCCEEEecCCCCCCC
Confidence 4455555555555554455555555555555555543
No 52
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.05 E-value=3.4e-07 Score=78.21 Aligned_cols=224 Identities=19% Similarity=0.170 Sum_probs=109.8
Q ss_pred CCCCcccEEEccCCCCCCCCCC----cccccCccccEEecCCCCCc----cC-------CccccCCCCCcEEecCCCCCc
Q psy9862 118 GAFPVLEVLDLTYNNLNEQSLP----GNFFMLETLRALYLGDNDFE----VL-------PAEIGNLKNLQILVLRENDLI 182 (378)
Q Consensus 118 ~~~~~L~~L~l~~n~i~~~~~~----~~l~~l~~L~~L~l~~n~l~----~l-------~~~l~~l~~L~~L~l~~n~~~ 182 (378)
..+..+++++++||.|.. ... ..+..-.+|+..++++-..+ .+ ..++-.++.++..+++.|-+.
T Consensus 27 ~~~d~~~evdLSGNtigt-EA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg 105 (388)
T COG5238 27 EMMDELVEVDLSGNTIGT-EAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFG 105 (388)
T ss_pred HhhcceeEEeccCCcccH-HHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccC
Confidence 345667777777777654 111 12334455666665544322 11 223456677888888888776
Q ss_pred -cCCh----hhcCCCCCcEEeccCCcCcccCc-ccc----cccccccccccccCCCCceeccCCcccccc-----ccccC
Q psy9862 183 -EIPK----ELGNLTRLRELHIQANRLTVLPP-EIG----NLDLASHKSVLKMDFNPWLVLRENDLIEIP-----KELGN 247 (378)
Q Consensus 183 -~l~~----~l~~l~~L~~L~l~~~~l~~~~~-~~~----~l~~l~~l~~~~~~~~~~l~l~~~~l~~l~-----~~l~~ 247 (378)
+.|+ .++.-..|.+|.+++|++..+.. .++ .+.... +......++......|.+...+ ..+..
T Consensus 106 ~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nK--Kaa~kp~Le~vicgrNRlengs~~~~a~~l~s 183 (388)
T COG5238 106 SEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNK--KAADKPKLEVVICGRNRLENGSKELSAALLES 183 (388)
T ss_pred cccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHh--hhccCCCceEEEeccchhccCcHHHHHHHHHh
Confidence 3333 35666778888888888763322 111 111111 1112222333445555554322 22344
Q ss_pred CcCcceeecccccCCcC--CC-CCCCcccccccccccccCCCCccCccchhhhhccCccccccchhhcCCCCCCEEEeec
Q psy9862 248 LSRLRELHIQANRLTVL--PP-EIGNLDLASHKSVLKMDFNPWVTPIADQLQLVLRENDLIEIPKELGNLSRLRELHIQA 324 (378)
Q Consensus 248 ~~~L~~L~l~~n~l~~~--~~-~~~~l~~~~~l~~l~l~~~~~~~~~~~l~~L~l~~n~l~~l~~~l~~~~~L~~L~l~~ 324 (378)
-..|+.+.+..|.|..- .. .+..+....+|++|++..|.|+..-+. .+..++..-+.|++|.+.+
T Consensus 184 h~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~------------~La~al~~W~~lrEL~lnD 251 (388)
T COG5238 184 HENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSR------------YLADALCEWNLLRELRLND 251 (388)
T ss_pred hcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHH------------HHHHHhcccchhhhccccc
Confidence 46788888888887711 11 122334445555555555555321110 1112222223456666666
Q ss_pred CCCC--cCChhhccC--CCccCcceeeccCCCCCcc
Q psy9862 325 NRLT--VLPPEIGNL--DLASHKSVLKMDFNPWVTP 356 (378)
Q Consensus 325 n~l~--~~~~~~~~l--~~~~~l~~l~l~~n~~~~~ 356 (378)
|-++ +....+..+ ...++|..|..++|...+.
T Consensus 252 Clls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~ 287 (388)
T COG5238 252 CLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRGG 287 (388)
T ss_pred hhhccccHHHHHHHhhhhcCCCccccccchhhhcCc
Confidence 6555 333333222 1234555555555554443
No 53
>KOG2120|consensus
Probab=98.04 E-value=1.6e-07 Score=81.18 Aligned_cols=173 Identities=18% Similarity=0.161 Sum_probs=110.2
Q ss_pred HHhhhhhcc--CCceeeccCCcccCcCccc-ccccccccEEEcccccccCchhHHHHhhccccccCCccccCCCCCCC--
Q psy9862 21 VLDESKEIK--NPELELADKGLSSFEELPG-LMNMLYITRITLSHNKLKGEIIVQVIKGLSNSKYNYIPILHVTSLPI-- 95 (378)
Q Consensus 21 ~~~~~~~~~--l~~L~l~~~~~~~~~~~~~-l~~~~~L~~L~ls~~~l~~~~~~~~~~~l~~l~~~~l~~l~l~~~~~-- 95 (378)
+++...+++ ++.+||+...|+. ..+-. +..|..|+.|.+.++.+.+ .+...+++.. . |+.++++....
T Consensus 176 lae~~~~frsRlq~lDLS~s~it~-stl~~iLs~C~kLk~lSlEg~~LdD----~I~~~iAkN~-~-L~~lnlsm~sG~t 248 (419)
T KOG2120|consen 176 LAEHFSPFRSRLQHLDLSNSVITV-STLHGILSQCSKLKNLSLEGLRLDD----PIVNTIAKNS-N-LVRLNLSMCSGFT 248 (419)
T ss_pred hhhhhhhhhhhhHHhhcchhheeH-HHHHHHHHHHHhhhhccccccccCc----HHHHHHhccc-c-ceeeccccccccc
Confidence 344445555 8899999888874 22222 3388899999999999998 4444455554 4 77777754432
Q ss_pred ----------CccchhccccCCcccc--cCCCCCCC-CCcccEEEccCCCCC--CCCCCcccccCccccEEecCCCCC-c
Q psy9862 96 ----------LPFLFLQFPCRMNRLS--SLPRGFGA-FPVLEVLDLTYNNLN--EQSLPGNFFMLETLRALYLGDNDF-E 159 (378)
Q Consensus 96 ----------~~~l~~~l~l~~~~l~--~~~~~~~~-~~~L~~L~l~~n~i~--~~~~~~~l~~l~~L~~L~l~~n~l-~ 159 (378)
+..+. +++++++.+. .+.....+ -++|+.|+++|+.-. .-.+..-...+++|.+|++++|.. +
T Consensus 249 ~n~~~ll~~scs~L~-~LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~ 327 (419)
T KOG2120|consen 249 ENALQLLLSSCSRLD-ELNLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLK 327 (419)
T ss_pred hhHHHHHHHhhhhHh-hcCchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccC
Confidence 66777 7888887766 12221222 257888888887632 112222235678888999988753 2
Q ss_pred -cCCccccCCCCCcEEecCCCCCccCCh---hhcCCCCCcEEeccCC
Q psy9862 160 -VLPAEIGNLKNLQILVLRENDLIEIPK---ELGNLTRLRELHIQAN 202 (378)
Q Consensus 160 -~l~~~l~~l~~L~~L~l~~n~~~~l~~---~l~~l~~L~~L~l~~~ 202 (378)
....++-+++.|++|.++.|-.- .|. .+...++|.+|++.++
T Consensus 328 ~~~~~~~~kf~~L~~lSlsRCY~i-~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 328 NDCFQEFFKFNYLQHLSLSRCYDI-IPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred chHHHHHHhcchheeeehhhhcCC-ChHHeeeeccCcceEEEEeccc
Confidence 22334566788888888876521 122 3577888888888775
No 54
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.95 E-value=1e-05 Score=50.02 Aligned_cols=38 Identities=34% Similarity=0.593 Sum_probs=21.3
Q ss_pred CCcEEecCCCCCccCChhhcCCCCCcEEeccCCcCccc
Q psy9862 170 NLQILVLRENDLIEIPKELGNLTRLRELHIQANRLTVL 207 (378)
Q Consensus 170 ~L~~L~l~~n~~~~l~~~l~~l~~L~~L~l~~~~l~~~ 207 (378)
+|++|++++|+++.+|+.+..+++|+.|++++|.++.+
T Consensus 2 ~L~~L~l~~N~i~~l~~~l~~l~~L~~L~l~~N~i~~i 39 (44)
T PF12799_consen 2 NLEELDLSNNQITDLPPELSNLPNLETLNLSNNPISDI 39 (44)
T ss_dssp T-SEEEETSSS-SSHGGHGTTCTTSSEEEETSSCCSBE
T ss_pred cceEEEccCCCCcccCchHhCCCCCCEEEecCCCCCCC
Confidence 45566666666665555566666666666666655543
No 55
>KOG3665|consensus
Probab=97.93 E-value=5.3e-06 Score=82.73 Aligned_cols=137 Identities=16% Similarity=0.139 Sum_probs=82.6
Q ss_pred hhhccCCceeeccCCcccCcCccccc-ccccccEEEcccccccCchhHHHHhhccccccCCccccCCCCCCCCccchhcc
Q psy9862 25 SKEIKNPELELADKGLSSFEELPGLM-NMLYITRITLSHNKLKGEIIVQVIKGLSNSKYNYIPILHVTSLPILPFLFLQF 103 (378)
Q Consensus 25 ~~~~~l~~L~l~~~~~~~~~~~~~l~-~~~~L~~L~ls~~~l~~~~~~~~~~~l~~l~~~~l~~l~l~~~~~~~~l~~~l 103 (378)
..-.+++.||++|.....-+....+. .+|.|+.|.+++-.+..+...++... +|+|. .|
T Consensus 119 ~sr~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~s-------------------FpNL~-sL 178 (699)
T KOG3665|consen 119 ESRQNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCAS-------------------FPNLR-SL 178 (699)
T ss_pred HHHHhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhc-------------------cCccc-ee
Confidence 33456888888886655433334555 77888888888876655333333333 33444 77
Q ss_pred ccCCcccccCCCCCCCCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCCCccCCcc-------ccCCCCCcEEec
Q psy9862 104 PCRMNRLSSLPRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAE-------IGNLKNLQILVL 176 (378)
Q Consensus 104 ~l~~~~l~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~~l~~~-------l~~l~~L~~L~l 176 (378)
|+++++++.+ ..++.+++|++|.+.+=.+........+..+++|+.||+|.......+.. -..+|.|+.||.
T Consensus 179 DIS~TnI~nl-~GIS~LknLq~L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDc 257 (699)
T KOG3665|consen 179 DISGTNISNL-SGISRLKNLQVLSMRNLEFESYQDLIDLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDC 257 (699)
T ss_pred ecCCCCccCc-HHHhccccHHHHhccCCCCCchhhHHHHhcccCCCeeeccccccccchHHHHHHHHhcccCccccEEec
Confidence 7777777766 33677777777777776665422223456677777777776654321111 123567777777
Q ss_pred CCCCCc
Q psy9862 177 RENDLI 182 (378)
Q Consensus 177 ~~n~~~ 182 (378)
+++.++
T Consensus 258 SgTdi~ 263 (699)
T KOG3665|consen 258 SGTDIN 263 (699)
T ss_pred CCcchh
Confidence 766665
No 56
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.90 E-value=4.7e-05 Score=70.41 Aligned_cols=71 Identities=18% Similarity=0.340 Sum_probs=39.0
Q ss_pred CCCcccEEEccCCCCCCCCCCcccccCccccEEecCCC-CCccCCccccCCCCCcEEecCCC-CCccCChhhcCCCCCcE
Q psy9862 119 AFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDN-DFEVLPAEIGNLKNLQILVLREN-DLIEIPKELGNLTRLRE 196 (378)
Q Consensus 119 ~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n-~l~~l~~~l~~l~~L~~L~l~~n-~~~~l~~~l~~l~~L~~ 196 (378)
.+.+++.|++++|.+.. +|. -..+|+.|.+++| .++.+|..+ ..+|++|++++| .+..+|. +|+.
T Consensus 50 ~~~~l~~L~Is~c~L~s--LP~---LP~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~Cs~L~sLP~------sLe~ 116 (426)
T PRK15386 50 EARASGRLYIKDCDIES--LPV---LPNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHCPEISGLPE------SVRS 116 (426)
T ss_pred HhcCCCEEEeCCCCCcc--cCC---CCCCCcEEEccCCCCcccCCchh--hhhhhheEccCccccccccc------ccce
Confidence 34667777777776653 331 1235777777653 344555433 246777777766 4444442 3455
Q ss_pred EeccCC
Q psy9862 197 LHIQAN 202 (378)
Q Consensus 197 L~l~~~ 202 (378)
|++.++
T Consensus 117 L~L~~n 122 (426)
T PRK15386 117 LEIKGS 122 (426)
T ss_pred EEeCCC
Confidence 555444
No 57
>KOG1644|consensus
Probab=97.87 E-value=2.4e-05 Score=64.23 Aligned_cols=98 Identities=26% Similarity=0.295 Sum_probs=56.0
Q ss_pred ccccCCcccccCCCCCCCCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCCCccCCc--cccCCCCCcEEecCCC
Q psy9862 102 QFPCRMNRLSSLPRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPA--EIGNLKNLQILVLREN 179 (378)
Q Consensus 102 ~l~l~~~~l~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~~l~~--~l~~l~~L~~L~l~~n 179 (378)
.++++.|++..++. |.+++.|.+|.+++|.|+.+. +.--..+++|+.|.+.+|.+..+.+ .+..++.|++|.+-+|
T Consensus 46 ~iDLtdNdl~~l~~-lp~l~rL~tLll~nNrIt~I~-p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Ltll~N 123 (233)
T KOG1644|consen 46 AIDLTDNDLRKLDN-LPHLPRLHTLLLNNNRITRID-PDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLTLLGN 123 (233)
T ss_pred eecccccchhhccc-CCCccccceEEecCCcceeec-cchhhhccccceEEecCcchhhhhhcchhccCCccceeeecCC
Confidence 45555555554432 556666666777776666522 3222345566667776666653322 2455666777777777
Q ss_pred CCccCCh----hhcCCCCCcEEeccC
Q psy9862 180 DLIEIPK----ELGNLTRLRELHIQA 201 (378)
Q Consensus 180 ~~~~l~~----~l~~l~~L~~L~l~~ 201 (378)
+++.-+. .+..+++|+.||..+
T Consensus 124 pv~~k~~YR~yvl~klp~l~~LDF~k 149 (233)
T KOG1644|consen 124 PVEHKKNYRLYVLYKLPSLRTLDFQK 149 (233)
T ss_pred chhcccCceeEEEEecCcceEeehhh
Confidence 6663322 246677777777664
No 58
>KOG1644|consensus
Probab=97.75 E-value=6.7e-05 Score=61.66 Aligned_cols=127 Identities=20% Similarity=0.234 Sum_probs=85.8
Q ss_pred ccccCCcccccCCCCCCCCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCCCccCCcccc-CCCCCcEEecCCCC
Q psy9862 102 QFPCRMNRLSSLPRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAEIG-NLKNLQILVLREND 180 (378)
Q Consensus 102 ~l~l~~~~l~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~~l~~~l~-~l~~L~~L~l~~n~ 180 (378)
.+++.+.++..+-..-.-......+|+++|.+.. ...|..++.|.+|.+++|.++.+...+. .+++|+.|.+.+|+
T Consensus 23 e~~LR~lkip~ienlg~~~d~~d~iDLtdNdl~~---l~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNs 99 (233)
T KOG1644|consen 23 ELDLRGLKIPVIENLGATLDQFDAIDLTDNDLRK---LDNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNS 99 (233)
T ss_pred ccccccccccchhhccccccccceecccccchhh---cccCCCccccceEEecCCcceeeccchhhhccccceEEecCcc
Confidence 4556555554332211123456789999999864 4457788899999999999998766654 45789999999999
Q ss_pred CccCCh--hhcCCCCCcEEeccCCcCcccCcccccccccccccccccCCCCceeccCCcc
Q psy9862 181 LIEIPK--ELGNLTRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWLVLRENDL 238 (378)
Q Consensus 181 ~~~l~~--~l~~l~~L~~L~l~~~~l~~~~~~~~~l~~l~~l~~~~~~~~~~l~l~~~~l 238 (378)
+.++.+ .+..++.|++|.+-+|.++.... .+.-.++.+.+++.+|++.-..
T Consensus 100 i~~l~dl~pLa~~p~L~~Ltll~Npv~~k~~-------YR~yvl~klp~l~~LDF~kVt~ 152 (233)
T KOG1644|consen 100 IQELGDLDPLASCPKLEYLTLLGNPVEHKKN-------YRLYVLYKLPSLRTLDFQKVTR 152 (233)
T ss_pred hhhhhhcchhccCCccceeeecCCchhcccC-------ceeEEEEecCcceEeehhhhhH
Confidence 987633 47788999999999998863221 1222233444445566666544
No 59
>KOG3665|consensus
Probab=97.60 E-value=2.2e-05 Score=78.37 Aligned_cols=106 Identities=24% Similarity=0.309 Sum_probs=73.2
Q ss_pred cchhccccCCcccc--cCCCC-CCCCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCCCccCCccccCCCCCcEE
Q psy9862 98 FLFLQFPCRMNRLS--SLPRG-FGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLKNLQIL 174 (378)
Q Consensus 98 ~l~~~l~l~~~~l~--~~~~~-~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~~l~~~l~~l~~L~~L 174 (378)
+|+ ++++++...- ..+.. -..+|.|+.|.+++-.+....+...+.++++|..||+++++++.+ ..++++++|+.|
T Consensus 123 nL~-~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl-~GIS~LknLq~L 200 (699)
T KOG3665|consen 123 NLQ-HLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL-SGISRLKNLQVL 200 (699)
T ss_pred hhh-hcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc-HHHhccccHHHH
Confidence 444 5666554322 22222 235688899998887775544555567888999999999888876 557888888888
Q ss_pred ecCCCCCccC--ChhhcCCCCCcEEeccCCcCc
Q psy9862 175 VLRENDLIEI--PKELGNLTRLRELHIQANRLT 205 (378)
Q Consensus 175 ~l~~n~~~~l--~~~l~~l~~L~~L~l~~~~l~ 205 (378)
.+.+=.+... -..+.++++|+.||+|.....
T Consensus 201 ~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~ 233 (699)
T KOG3665|consen 201 SMRNLEFESYQDLIDLFNLKKLRVLDISRDKNN 233 (699)
T ss_pred hccCCCCCchhhHHHHhcccCCCeeeccccccc
Confidence 8877666532 235677888999999876554
No 60
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.46 E-value=0.00049 Score=63.79 Aligned_cols=48 Identities=21% Similarity=0.215 Sum_probs=28.5
Q ss_pred ccCCceeeccCCcccCcCcccccccccccEEEcccccccCchhHHHHhhcccc
Q psy9862 28 IKNPELELADKGLSSFEELPGLMNMLYITRITLSHNKLKGEIIVQVIKGLSNS 80 (378)
Q Consensus 28 ~~l~~L~l~~~~~~~~~~~~~l~~~~~L~~L~ls~~~l~~~~~~~~~~~l~~l 80 (378)
.+++.|++++|.+..++.+| ++|+.|++++|.-....+..+|..+..+
T Consensus 52 ~~l~~L~Is~c~L~sLP~LP-----~sLtsL~Lsnc~nLtsLP~~LP~nLe~L 99 (426)
T PRK15386 52 RASGRLYIKDCDIESLPVLP-----NELTEITIENCNNLTTLPGSIPEGLEKL 99 (426)
T ss_pred cCCCEEEeCCCCCcccCCCC-----CCCcEEEccCCCCcccCCchhhhhhhhe
Confidence 55888999888776655332 3688888887543333333344433333
No 61
>KOG4308|consensus
Probab=97.42 E-value=7.9e-07 Score=84.77 Aligned_cols=159 Identities=25% Similarity=0.239 Sum_probs=100.9
Q ss_pred CCceeeccCCcccCcCcc----cccccccccEEEcccccccCchhHHHHhhccccccCCccccCCCCCCCCccchhcccc
Q psy9862 30 NPELELADKGLSSFEELP----GLMNMLYITRITLSHNKLKGEIIVQVIKGLSNSKYNYIPILHVTSLPILPFLFLQFPC 105 (378)
Q Consensus 30 l~~L~l~~~~~~~~~~~~----~l~~~~~L~~L~ls~~~l~~~~~~~~~~~l~~l~~~~l~~l~l~~~~~~~~l~~~l~l 105 (378)
+..+.|.+|.+...+ .. .+...+.|..|++++|.+.+++...+.+.+.... . .++ .+++
T Consensus 89 l~~L~L~~~~l~~~~-~~~l~~~l~t~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~-~--------------~l~-~L~l 151 (478)
T KOG4308|consen 89 LLHLSLANNRLGDRG-AEELAQALKTLPTLGQLDLSGNNLGDEGARLLCEGLRLPQ-C--------------LLQ-TLEL 151 (478)
T ss_pred HHHhhhhhCccccch-HHHHHHHhcccccHhHhhcccCCCccHhHHHHHhhcccch-H--------------HHH-HHHh
Confidence 667888888887532 22 3336788888888888888888888877777653 1 334 5666
Q ss_pred CCcccc-----cCCCCCCCCCcccEEEccCCCCCCCC---CCcccc----cCccccEEecCCCCCc-----cCCccccCC
Q psy9862 106 RMNRLS-----SLPRGFGAFPVLEVLDLTYNNLNEQS---LPGNFF----MLETLRALYLGDNDFE-----VLPAEIGNL 168 (378)
Q Consensus 106 ~~~~l~-----~~~~~~~~~~~L~~L~l~~n~i~~~~---~~~~l~----~l~~L~~L~l~~n~l~-----~l~~~l~~l 168 (378)
..+.++ .+...+.....+++++++.|.+.... .+..+. ...++++|.+++|.++ .+...+...
T Consensus 152 ~~c~l~~~g~~~l~~~L~~~~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~l~~~l~~~ 231 (478)
T KOG4308|consen 152 VSCSLTSEGAAPLAAVLEKNEHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSCALLDEVLASG 231 (478)
T ss_pred hcccccccchHHHHHHHhcccchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHHHHHHHHHhcc
Confidence 666655 23444555778888888888874311 112222 3566888888888766 223334444
Q ss_pred CC-CcEEecCCCCCcc-----CChhhcCC-CCCcEEeccCCcCc
Q psy9862 169 KN-LQILVLRENDLIE-----IPKELGNL-TRLRELHIQANRLT 205 (378)
Q Consensus 169 ~~-L~~L~l~~n~~~~-----l~~~l~~l-~~L~~L~l~~~~l~ 205 (378)
.. +..+++.+|.+.. +.+.+..+ ..++.+++..|.++
T Consensus 232 ~~~~~el~l~~n~l~d~g~~~L~~~l~~~~~~l~~l~l~~nsi~ 275 (478)
T KOG4308|consen 232 ESLLRELDLASNKLGDVGVEKLLPCLSVLSETLRVLDLSRNSIT 275 (478)
T ss_pred chhhHHHHHHhcCcchHHHHHHHHHhcccchhhhhhhhhcCCcc
Confidence 54 6668888887762 23334445 56777777777776
No 62
>KOG2739|consensus
Probab=97.16 E-value=0.00043 Score=59.28 Aligned_cols=56 Identities=25% Similarity=0.256 Sum_probs=26.2
Q ss_pred ccccEEecCCCCCccCC--ccccCCCCCcEEecCCCCCccCC----hhhcCCCCCcEEeccC
Q psy9862 146 ETLRALYLGDNDFEVLP--AEIGNLKNLQILVLRENDLIEIP----KELGNLTRLRELHIQA 201 (378)
Q Consensus 146 ~~L~~L~l~~n~l~~l~--~~l~~l~~L~~L~l~~n~~~~l~----~~l~~l~~L~~L~l~~ 201 (378)
++|+++.+++|++..+. ..+..+.+|..|++..|..+.+- ..|.-+++|++|+-..
T Consensus 91 P~l~~l~ls~Nki~~lstl~pl~~l~nL~~Ldl~n~~~~~l~dyre~vf~ll~~L~~LD~~d 152 (260)
T KOG2739|consen 91 PNLKVLNLSGNKIKDLSTLRPLKELENLKSLDLFNCSVTNLDDYREKVFLLLPSLKYLDGCD 152 (260)
T ss_pred CceeEEeecCCccccccccchhhhhcchhhhhcccCCccccccHHHHHHHHhhhhccccccc
Confidence 45555555555444211 12334445555555555554331 1245556666655443
No 63
>KOG2123|consensus
Probab=96.83 E-value=4.1e-05 Score=65.95 Aligned_cols=75 Identities=23% Similarity=0.276 Sum_probs=41.1
Q ss_pred CCcCcceeecccccCCcCCCCCCCcccccccccccccCCCCcc-----CccchhhhhccCccccccch--hhcCCCCCCE
Q psy9862 247 NLSRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWVT-----PIADQLQLVLRENDLIEIPK--ELGNLSRLRE 319 (378)
Q Consensus 247 ~~~~L~~L~l~~n~l~~~~~~~~~l~~~~~l~~l~l~~~~~~~-----~~~~l~~L~l~~n~l~~l~~--~l~~~~~L~~ 319 (378)
.+.+.+.|++.+|++..+.. +.+++.|+++.++-|.+.. .+.+|++|.+..|.|..+.+ .+.++++|+.
T Consensus 17 dl~~vkKLNcwg~~L~DIsi----c~kMp~lEVLsLSvNkIssL~pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~ 92 (388)
T KOG2123|consen 17 DLENVKKLNCWGCGLDDISI----CEKMPLLEVLSLSVNKISSLAPLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRT 92 (388)
T ss_pred HHHHhhhhcccCCCccHHHH----HHhcccceeEEeeccccccchhHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhh
Confidence 35567888898888875532 4455666666665555432 33344555555555544432 2344455555
Q ss_pred EEeecC
Q psy9862 320 LHIQAN 325 (378)
Q Consensus 320 L~l~~n 325 (378)
|.|..|
T Consensus 93 LWL~EN 98 (388)
T KOG2123|consen 93 LWLDEN 98 (388)
T ss_pred HhhccC
Confidence 555544
No 64
>KOG2739|consensus
Probab=96.80 E-value=0.00091 Score=57.35 Aligned_cols=69 Identities=29% Similarity=0.286 Sum_probs=32.2
Q ss_pred CCCCCCCccchhccccCCcc--cc-cCCCCCCCCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCCCc
Q psy9862 90 VTSLPILPFLFLQFPCRMNR--LS-SLPRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFE 159 (378)
Q Consensus 90 l~~~~~~~~l~~~l~l~~~~--l~-~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~ 159 (378)
+..+|.+|+|+ ++.++.|. ++ .+......+++|++|++++|++....-...+..+.+|..|++..|..+
T Consensus 58 ~~~~P~Lp~Lk-kL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~lstl~pl~~l~nL~~Ldl~n~~~~ 129 (260)
T KOG2739|consen 58 LTNFPKLPKLK-KLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLSTLRPLKELENLKSLDLFNCSVT 129 (260)
T ss_pred cccCCCcchhh-hhcccCCcccccccceehhhhCCceeEEeecCCccccccccchhhhhcchhhhhcccCCcc
Confidence 34455555555 55555552 22 222223334555666666655543221222334444555555555444
No 65
>KOG2123|consensus
Probab=96.70 E-value=7.4e-05 Score=64.42 Aligned_cols=98 Identities=30% Similarity=0.370 Sum_probs=74.5
Q ss_pred CccchhccccCCcccccCCCCCCCCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCCCccCCc--cccCCCCCcE
Q psy9862 96 LPFLFLQFPCRMNRLSSLPRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPA--EIGNLKNLQI 173 (378)
Q Consensus 96 ~~~l~~~l~l~~~~l~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~~l~~--~l~~l~~L~~ 173 (378)
+.+.+ +|+++++.++.+.- ..+|+.|++|.|+-|+|.. ...+..+++|++|+|..|.|..+.. -+..+++|+.
T Consensus 18 l~~vk-KLNcwg~~L~DIsi-c~kMp~lEVLsLSvNkIss---L~pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~ 92 (388)
T KOG2123|consen 18 LENVK-KLNCWGCGLDDISI-CEKMPLLEVLSLSVNKISS---LAPLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRT 92 (388)
T ss_pred HHHhh-hhcccCCCccHHHH-HHhcccceeEEeecccccc---chhHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhh
Confidence 33555 89999999886543 4578999999999999985 3457788999999999999886654 3678899999
Q ss_pred EecCCCCCcc-C-----ChhhcCCCCCcEEe
Q psy9862 174 LVLRENDLIE-I-----PKELGNLTRLRELH 198 (378)
Q Consensus 174 L~l~~n~~~~-l-----~~~l~~l~~L~~L~ 198 (378)
|.+..|+=.. - ...+..+++|+.||
T Consensus 93 LWL~ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 93 LWLDENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred HhhccCCcccccchhHHHHHHHHcccchhcc
Confidence 9999887441 1 12366778888776
No 66
>KOG4341|consensus
Probab=96.47 E-value=0.0002 Score=65.23 Aligned_cols=40 Identities=20% Similarity=0.050 Sum_probs=28.7
Q ss_pred ccCCceeeccCCcccCcCccccc-ccccccEEEccccc-ccC
Q psy9862 28 IKNPELELADKGLSSFEELPGLM-NMLYITRITLSHNK-LKG 67 (378)
Q Consensus 28 ~~l~~L~l~~~~~~~~~~~~~l~-~~~~L~~L~ls~~~-l~~ 67 (378)
..+++|.+.|+.-.....+..+. ++|+++.|++.++. +++
T Consensus 138 g~lk~LSlrG~r~v~~sslrt~~~~CpnIehL~l~gc~~iTd 179 (483)
T KOG4341|consen 138 GFLKELSLRGCRAVGDSSLRTFASNCPNIEHLALYGCKKITD 179 (483)
T ss_pred cccccccccccccCCcchhhHHhhhCCchhhhhhhcceeccH
Confidence 34678888888776655555555 88999999888874 444
No 67
>KOG4242|consensus
Probab=96.40 E-value=0.012 Score=54.86 Aligned_cols=279 Identities=17% Similarity=0.041 Sum_probs=147.9
Q ss_pred cccccEEEcccccccCchhHHHHhhccccccCCccccCCCCCCCCccchhccccCCcccccCCCCCCCCCcccEEEccCC
Q psy9862 52 MLYITRITLSHNKLKGEIIVQVIKGLSNSKYNYIPILHVTSLPILPFLFLQFPCRMNRLSSLPRGFGAFPVLEVLDLTYN 131 (378)
Q Consensus 52 ~~~L~~L~ls~~~l~~~~~~~~~~~l~~l~~~~l~~l~l~~~~~~~~l~~~l~l~~~~l~~~~~~~~~~~~L~~L~l~~n 131 (378)
-+.++++|++.|.+.++++..++.....+. ++ +-.++.-.|..++.. ..-..+.+++++.|
T Consensus 164 npr~r~~dls~npi~dkvpihl~~p~~pl~-----------------lr-~c~lsskfis~l~~q-sg~~~lteldls~n 224 (553)
T KOG4242|consen 164 NPRARQHDLSPNPIGDKVPIHLPQPGNPLS-----------------LR-VCELSSKFISKLLIQ-SGRLWLTELDLSTN 224 (553)
T ss_pred cchhhhhccCCCcccccCCccccCCCCccc-----------------hh-hhhhhhhHHHHhhhh-hccccccccccccC
Confidence 356788888888887755554443222221 11 111111112222211 12245778888988
Q ss_pred CCCCCCCCccc---ccCccccEEecCCCCCc--cCCc--cccCCCCCcEEecCCCCCc-----cCChh----hcCCCCCc
Q psy9862 132 NLNEQSLPGNF---FMLETLRALYLGDNDFE--VLPA--EIGNLKNLQILVLRENDLI-----EIPKE----LGNLTRLR 195 (378)
Q Consensus 132 ~i~~~~~~~~l---~~l~~L~~L~l~~n~l~--~l~~--~l~~l~~L~~L~l~~n~~~-----~l~~~----l~~l~~L~ 195 (378)
+..+ .++..+ ..-..++.++.+...+. .... ..+.-..+...+++.|... +.+.. ++.-.++
T Consensus 225 ~~Kd-dip~~~n~~a~~~vl~~ld~s~tgirlD~l~~~l~~g~~tkl~~~kls~ng~s~skg~Egg~~~k~~fS~~~sg- 302 (553)
T KOG4242|consen 225 GGKD-DIPRTLNKKAGTLVLFKLDRSTTGIRLDLLTSPLAAGRTTKLTFGKLSRNGTSPSKGEEGGGAEKDTFSPDPSG- 302 (553)
T ss_pred CCCc-cchhHHHHhhhhhhhhcccccccccchhhcccccccccccccchhhhccCCCCcccccccccccccccCcCccc-
Confidence 8776 445432 22335777777777654 2222 2344457777777777654 33332 3444566
Q ss_pred EEeccCCcCc--ccCcccccccccccccccccCCCCceeccCCccc--cccccccCCcCcceeecccccCCcCCCCCCCc
Q psy9862 196 ELHIQANRLT--VLPPEIGNLDLASHKSVLKMDFNPWLVLRENDLI--EIPKELGNLSRLRELHIQANRLTVLPPEIGNL 271 (378)
Q Consensus 196 ~L~l~~~~l~--~~~~~~~~l~~l~~l~~~~~~~~~~l~l~~~~l~--~l~~~l~~~~~L~~L~l~~n~l~~~~~~~~~l 271 (378)
+|++..+.+. ..+..+-.+...+...- -.+++..|... ....+-..-..++.+...+|.+..-....+..
T Consensus 303 hln~~~~~~psE~lks~LLgla~ne~t~g------~rldl~~cp~~~a~vleaci~g~R~q~l~~rdnnldgeg~~vgk~ 376 (553)
T KOG4242|consen 303 HLNSRPRYTPSEKLKSMLLGLAENEATLG------ARLDLRRCPLERAEVLEACIFGQRVQVLLQRDNNLDGEGGAVGKR 376 (553)
T ss_pred ccccccccCchhhhhhhhccccccccccc------ccCChhhccccccchhhccccceeeeEeeccccccccccccccce
Confidence 7777766553 22222222211111110 12555555543 22222222234888888888776333333355
Q ss_pred ccccccccccccCCCC----------------ccCccchhhhhccCccccccch----hhcCCCCCCEEEeecCCCCcCC
Q psy9862 272 DLASHKSVLKMDFNPW----------------VTPIADQLQLVLRENDLIEIPK----ELGNLSRLRELHIQANRLTVLP 331 (378)
Q Consensus 272 ~~~~~l~~l~l~~~~~----------------~~~~~~l~~L~l~~n~l~~l~~----~l~~~~~L~~L~l~~n~l~~~~ 331 (378)
....+...+.++...- .....-+..+.++.+.++.-+. .+.+-+.+..|++++|..+..+
T Consensus 377 ~~s~s~r~l~agrs~~kqvm~s~~~a~~v~k~~~~~g~l~el~ls~~~lka~l~s~in~l~stqtl~kldisgn~mgd~g 456 (553)
T KOG4242|consen 377 KQSKSGRILKAGRSGDKQVMDSSTEAPPVSKKSRTHGVLAELSLSPGPLKAGLESAINKLLSTQTLAKLDISGNGMGDGG 456 (553)
T ss_pred eeccccccccccccCCceeccccccchhhhhhhcccccccCcccCCCcccccHHHHHHhhccCcccccccccCCCcccCC
Confidence 5555555555443211 1123335567888887762222 2355678999999999777333
Q ss_pred --hhhccCCCccCcceeeccCCCCCccc
Q psy9862 332 --PEIGNLDLASHKSVLKMDFNPWVTPI 357 (378)
Q Consensus 332 --~~~~~l~~~~~l~~l~l~~n~~~~~~ 357 (378)
..-++++....++.+..+.|....++
T Consensus 457 ap~lpkalq~n~rlr~ipds~n~p~~~g 484 (553)
T KOG4242|consen 457 APPLPKALQSNCRLRPIPDSLNLPEDPG 484 (553)
T ss_pred CCcCccccCCCCccCCCCCCCCCccccc
Confidence 33356677778888888888765444
No 68
>KOG4308|consensus
Probab=96.15 E-value=0.00014 Score=69.66 Aligned_cols=205 Identities=23% Similarity=0.188 Sum_probs=108.1
Q ss_pred ccEEEccCCCCCCCCCC---cccccCccccEEecCCCCCc-----cCCccccCC-CCCcEEecCCCCCc-----cCChhh
Q psy9862 123 LEVLDLTYNNLNEQSLP---GNFFMLETLRALYLGDNDFE-----VLPAEIGNL-KNLQILVLRENDLI-----EIPKEL 188 (378)
Q Consensus 123 L~~L~l~~n~i~~~~~~---~~l~~l~~L~~L~l~~n~l~-----~l~~~l~~l-~~L~~L~l~~n~~~-----~l~~~l 188 (378)
+..|.+.+|.+.+.... ..+...++|..|++++|.++ .+...+... ..+++|++..|.++ .++..+
T Consensus 89 l~~L~L~~~~l~~~~~~~l~~~l~t~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~L~l~~c~l~~~g~~~l~~~L 168 (478)
T KOG4308|consen 89 LLHLSLANNRLGDRGAEELAQALKTLPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQTLELVSCSLTSEGAAPLAAVL 168 (478)
T ss_pred HHHhhhhhCccccchHHHHHHHhcccccHhHhhcccCCCccHhHHHHHhhcccchHHHHHHHhhcccccccchHHHHHHH
Confidence 66777777777653211 22445566777777777665 111222222 34455555555554 123334
Q ss_pred cCCCCCcEEeccCCcCcccCcccccccccccccccccCCCCceeccCCccccccccccCCcCcceeecccccCCcCCCCC
Q psy9862 189 GNLTRLRELHIQANRLTVLPPEIGNLDLASHKSVLKMDFNPWLVLRENDLIEIPKELGNLSRLRELHIQANRLTVLPPEI 268 (378)
Q Consensus 189 ~~l~~L~~L~l~~~~l~~~~~~~~~l~~l~~l~~~~~~~~~~l~l~~~~l~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~ 268 (378)
.....++.++++.|.+.... ..... ..++..+....+++.|.+.+|.++... .
T Consensus 169 ~~~~~l~~l~l~~n~l~~~g--~~~l~-----------------------~~l~~~~~~~~~le~L~L~~~~~t~~~--c 221 (478)
T KOG4308|consen 169 EKNEHLTELDLSLNGLIELG--LLVLS-----------------------QALESAASPLSSLETLKLSRCGVTSSS--C 221 (478)
T ss_pred hcccchhHHHHHhcccchhh--hHHHh-----------------------hhhhhhhcccccHHHHhhhhcCcChHH--H
Confidence 44555555555555543100 00000 011112334566777777777665111 0
Q ss_pred CCcccccccccccccCCCCccCccc-hhhhhccCcccc-----ccchhhcCC-CCCCEEEeecCCCCc-CChhh-ccCCC
Q psy9862 269 GNLDLASHKSVLKMDFNPWVTPIAD-QLQLVLRENDLI-----EIPKELGNL-SRLRELHIQANRLTV-LPPEI-GNLDL 339 (378)
Q Consensus 269 ~~l~~~~~l~~l~l~~~~~~~~~~~-l~~L~l~~n~l~-----~l~~~l~~~-~~L~~L~l~~n~l~~-~~~~~-~~l~~ 339 (378)
..++. .....+. +.++++..|.+. .+.+.+..+ .+++.++++.|.|+. -...+ ..+..
T Consensus 222 ~~l~~-------------~l~~~~~~~~el~l~~n~l~d~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~ 288 (478)
T KOG4308|consen 222 ALLDE-------------VLASGESLLRELDLASNKLGDVGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVS 288 (478)
T ss_pred HHHHH-------------HHhccchhhHHHHHHhcCcchHHHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhh
Confidence 00000 0112222 556888888876 334455666 678999999998882 22222 34556
Q ss_pred ccCcceeeccCCCCCccchHHhhhhhHH
Q psy9862 340 ASHKSVLKMDFNPWVTPIADQLQVGISH 367 (378)
Q Consensus 340 ~~~l~~l~l~~n~~~~~~~~~~~~~~~~ 367 (378)
.+.++++.+++|++.....+........
T Consensus 289 ~~~l~~l~l~~n~l~~~~~~~~~~~l~~ 316 (478)
T KOG4308|consen 289 CRQLEELSLSNNPLTDYGVELLLEALER 316 (478)
T ss_pred hHHHHHhhcccCccccHHHHHHHHHhhh
Confidence 6689999999999887776666554443
No 69
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.95 E-value=0.0024 Score=32.77 Aligned_cols=19 Identities=32% Similarity=0.553 Sum_probs=11.5
Q ss_pred CCCEEEeecCCCCcCChhh
Q psy9862 316 RLRELHIQANRLTVLPPEI 334 (378)
Q Consensus 316 ~L~~L~l~~n~l~~~~~~~ 334 (378)
+|++||+++|+++.+|+.+
T Consensus 1 ~L~~Ldls~n~l~~ip~~~ 19 (22)
T PF00560_consen 1 NLEYLDLSGNNLTSIPSSF 19 (22)
T ss_dssp TESEEEETSSEESEEGTTT
T ss_pred CccEEECCCCcCEeCChhh
Confidence 3566666666666665544
No 70
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=95.76 E-value=0.0066 Score=28.93 Aligned_cols=17 Identities=53% Similarity=0.823 Sum_probs=9.2
Q ss_pred CCCCEEEeecCCCCcCC
Q psy9862 315 SRLRELHIQANRLTVLP 331 (378)
Q Consensus 315 ~~L~~L~l~~n~l~~~~ 331 (378)
++|++|++++|+++++|
T Consensus 1 ~~L~~L~l~~n~L~~lP 17 (17)
T PF13504_consen 1 PNLRTLDLSNNRLTSLP 17 (17)
T ss_dssp TT-SEEEETSS--SSE-
T ss_pred CccCEEECCCCCCCCCc
Confidence 35777777777777654
No 71
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=94.46 E-value=0.014 Score=29.91 Aligned_cols=19 Identities=32% Similarity=0.553 Sum_probs=13.4
Q ss_pred CcceeecccccCCcCCCCC
Q psy9862 250 RLRELHIQANRLTVLPPEI 268 (378)
Q Consensus 250 ~L~~L~l~~n~l~~~~~~~ 268 (378)
+|++||+++|+++.+|+.+
T Consensus 1 ~L~~Ldls~n~l~~ip~~~ 19 (22)
T PF00560_consen 1 NLEYLDLSGNNLTSIPSSF 19 (22)
T ss_dssp TESEEEETSSEESEEGTTT
T ss_pred CccEEECCCCcCEeCChhh
Confidence 4677778777777776654
No 72
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=94.16 E-value=0.16 Score=39.32 Aligned_cols=81 Identities=19% Similarity=0.331 Sum_probs=32.6
Q ss_pred CCCCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCCCccCCc-cccCCCCCcEEecCCCCCccCC-hhhcCCCCC
Q psy9862 117 FGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPA-EIGNLKNLQILVLRENDLIEIP-KELGNLTRL 194 (378)
Q Consensus 117 ~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~~l~~-~l~~l~~L~~L~l~~n~~~~l~-~~l~~l~~L 194 (378)
|.++.+|+.+.+.. .+..+. ...|.++++|+.+.+..+ +..++. .+..+++++.+.+.. .+..++ ..|..+.++
T Consensus 8 F~~~~~l~~i~~~~-~~~~I~-~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~l 83 (129)
T PF13306_consen 8 FYNCSNLESITFPN-TIKKIG-ENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTNL 83 (129)
T ss_dssp TTT-TT--EEEETS-T--EE--TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TTE
T ss_pred HhCCCCCCEEEECC-CeeEeC-hhhccccccccccccccc-ccccceeeeecccccccccccc-cccccccccccccccc
Confidence 55555666666553 232211 234555555666666553 443332 344444566666543 333332 234455566
Q ss_pred cEEeccC
Q psy9862 195 RELHIQA 201 (378)
Q Consensus 195 ~~L~l~~ 201 (378)
+.+.+..
T Consensus 84 ~~i~~~~ 90 (129)
T PF13306_consen 84 KNIDIPS 90 (129)
T ss_dssp CEEEETT
T ss_pred cccccCc
Confidence 6655543
No 73
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=94.00 E-value=0.052 Score=29.66 Aligned_cols=26 Identities=27% Similarity=0.282 Sum_probs=22.2
Q ss_pred ccccEEEcccccccCchhHHHHhhcc
Q psy9862 53 LYITRITLSHNKLKGEIIVQVIKGLS 78 (378)
Q Consensus 53 ~~L~~L~ls~~~l~~~~~~~~~~~l~ 78 (378)
++|++|+|++|.+.+++...+.+.+.
T Consensus 2 ~~L~~LdL~~N~i~~~G~~~L~~~L~ 27 (28)
T smart00368 2 PSLRELDLSNNKLGDEGARALAEALK 27 (28)
T ss_pred CccCEEECCCCCCCHHHHHHHHHHhc
Confidence 57999999999999988888877664
No 74
>KOG0473|consensus
Probab=93.80 E-value=0.0021 Score=54.30 Aligned_cols=87 Identities=23% Similarity=0.296 Sum_probs=57.3
Q ss_pred CCCCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCCCccCCccccCCCCCcEEecCCCCCccCChhhcCCCCCcE
Q psy9862 117 FGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLKNLQILVLRENDLIEIPKELGNLTRLRE 196 (378)
Q Consensus 117 ~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~~l~~~l~~l~~L~~L~l~~n~~~~l~~~l~~l~~L~~ 196 (378)
+..+...+.||++.|.+.. +...+..++.+..|+++.|++..+|..+++...+..++...|.....|.++...+++++
T Consensus 38 i~~~kr~tvld~~s~r~vn--~~~n~s~~t~~~rl~~sknq~~~~~~d~~q~~e~~~~~~~~n~~~~~p~s~~k~~~~k~ 115 (326)
T KOG0473|consen 38 IASFKRVTVLDLSSNRLVN--LGKNFSILTRLVRLDLSKNQIKFLPKDAKQQRETVNAASHKNNHSQQPKSQKKEPHPKK 115 (326)
T ss_pred hhccceeeeehhhhhHHHh--hccchHHHHHHHHHhccHhhHhhChhhHHHHHHHHHHHhhccchhhCCccccccCCcch
Confidence 5556666777777776652 34445556666677777776666666666666666666666766666777777777777
Q ss_pred EeccCCcCc
Q psy9862 197 LHIQANRLT 205 (378)
Q Consensus 197 L~l~~~~l~ 205 (378)
++..++.++
T Consensus 116 ~e~k~~~~~ 124 (326)
T KOG0473|consen 116 NEQKKTEFF 124 (326)
T ss_pred hhhccCcch
Confidence 777666553
No 75
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=93.73 E-value=0.22 Score=38.49 Aligned_cols=97 Identities=18% Similarity=0.301 Sum_probs=54.8
Q ss_pred cchhccccCCcccccCCCC-CCCCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCCCccCCc-cccCCCCCcEEe
Q psy9862 98 FLFLQFPCRMNRLSSLPRG-FGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPA-EIGNLKNLQILV 175 (378)
Q Consensus 98 ~l~~~l~l~~~~l~~~~~~-~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~~l~~-~l~~l~~L~~L~ 175 (378)
+++ .+.+.. .+..++.. |.++..++.+.+.++ +..+. ...|..+++++.+.+.. .+..++. .+..+.+++.++
T Consensus 13 ~l~-~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~-~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~l~~i~ 87 (129)
T PF13306_consen 13 NLE-SITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIG-DNAFSNCKSLESITFPN-NLKSIGDNAFSNCTNLKNID 87 (129)
T ss_dssp T---EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE--TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TTECEEE
T ss_pred CCC-EEEECC-CeeEeChhhccccccccccccccc-ccccc-eeeeecccccccccccc-cccccccccccccccccccc
Confidence 444 555553 45666555 888889999999885 55422 45577887899999976 4544433 566788999999
Q ss_pred cCCCCCccCC-hhhcCCCCCcEEeccC
Q psy9862 176 LRENDLIEIP-KELGNLTRLRELHIQA 201 (378)
Q Consensus 176 l~~n~~~~l~-~~l~~l~~L~~L~l~~ 201 (378)
+..+ +..++ ..+... +++.+.+..
T Consensus 88 ~~~~-~~~i~~~~f~~~-~l~~i~~~~ 112 (129)
T PF13306_consen 88 IPSN-ITEIGSSSFSNC-NLKEINIPS 112 (129)
T ss_dssp ETTT--BEEHTTTTTT--T--EEE-TT
T ss_pred cCcc-ccEEchhhhcCC-CceEEEECC
Confidence 9765 66553 346666 888887664
No 76
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=93.25 E-value=0.081 Score=28.20 Aligned_cols=21 Identities=48% Similarity=0.817 Sum_probs=17.1
Q ss_pred CCCCCEEEeecCCCCcCChhh
Q psy9862 314 LSRLRELHIQANRLTVLPPEI 334 (378)
Q Consensus 314 ~~~L~~L~l~~n~l~~~~~~~ 334 (378)
+++|++|++++|+|+.+|..+
T Consensus 1 L~~L~~L~L~~N~l~~lp~~~ 21 (26)
T smart00370 1 LPNLRELDLSNNQLSSLPPGA 21 (26)
T ss_pred CCCCCEEECCCCcCCcCCHHH
Confidence 367889999999999888765
No 77
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=93.25 E-value=0.081 Score=28.20 Aligned_cols=21 Identities=48% Similarity=0.817 Sum_probs=17.1
Q ss_pred CCCCCEEEeecCCCCcCChhh
Q psy9862 314 LSRLRELHIQANRLTVLPPEI 334 (378)
Q Consensus 314 ~~~L~~L~l~~n~l~~~~~~~ 334 (378)
+++|++|++++|+|+.+|..+
T Consensus 1 L~~L~~L~L~~N~l~~lp~~~ 21 (26)
T smart00369 1 LPNLRELDLSNNQLSSLPPGA 21 (26)
T ss_pred CCCCCEEECCCCcCCcCCHHH
Confidence 367889999999999888765
No 78
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=92.85 E-value=0.065 Score=27.95 Aligned_cols=22 Identities=18% Similarity=0.214 Sum_probs=14.9
Q ss_pred cccccEEEcccccccCchhHHH
Q psy9862 52 MLYITRITLSHNKLKGEIIVQV 73 (378)
Q Consensus 52 ~~~L~~L~ls~~~l~~~~~~~~ 73 (378)
+++|+.|++++|.++++++..+
T Consensus 1 ~~~L~~L~l~~n~i~~~g~~~l 22 (24)
T PF13516_consen 1 NPNLETLDLSNNQITDEGASAL 22 (24)
T ss_dssp -TT-SEEE-TSSBEHHHHHHHH
T ss_pred CCCCCEEEccCCcCCHHHHHHh
Confidence 5789999999999988555443
No 79
>KOG1947|consensus
Probab=91.79 E-value=0.024 Score=54.89 Aligned_cols=88 Identities=25% Similarity=0.165 Sum_probs=49.6
Q ss_pred CCCCCcccEEEccCCCCCCCCCC----cccccCccccEEecCCCC-Ccc--CCccccCCCCCcEEecCCCC-Cc--cCCh
Q psy9862 117 FGAFPVLEVLDLTYNNLNEQSLP----GNFFMLETLRALYLGDND-FEV--LPAEIGNLKNLQILVLREND-LI--EIPK 186 (378)
Q Consensus 117 ~~~~~~L~~L~l~~n~i~~~~~~----~~l~~l~~L~~L~l~~n~-l~~--l~~~l~~l~~L~~L~l~~n~-~~--~l~~ 186 (378)
...+++|++|+++++.......+ .....+.+|+.|+++++. ++. +......+++|++|.+.++. ++ .+..
T Consensus 210 ~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~l~~~c~~L~~L~l~~c~~lt~~gl~~ 289 (482)
T KOG1947|consen 210 ALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSALASRCPNLETLSLSNCSNLTDEGLVS 289 (482)
T ss_pred HhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHHHHhhCCCcceEccCCCCccchhHHHH
Confidence 45667888888876311110111 123445677788887776 441 11112336778888866665 44 2333
Q ss_pred hhcCCCCCcEEeccCCcC
Q psy9862 187 ELGNLTRLRELHIQANRL 204 (378)
Q Consensus 187 ~l~~l~~L~~L~l~~~~l 204 (378)
....++.|++|++++|..
T Consensus 290 i~~~~~~L~~L~l~~c~~ 307 (482)
T KOG1947|consen 290 IAERCPSLRELDLSGCHG 307 (482)
T ss_pred HHHhcCcccEEeeecCcc
Confidence 345667788888887644
No 80
>KOG0473|consensus
Probab=90.01 E-value=0.0092 Score=50.53 Aligned_cols=90 Identities=17% Similarity=0.160 Sum_probs=76.1
Q ss_pred CCCCCCCccchhccccCCcccccCCCCCCCCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCCCccCCccccCCC
Q psy9862 90 VTSLPILPFLFLQFPCRMNRLSSLPRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLK 169 (378)
Q Consensus 90 l~~~~~~~~l~~~l~l~~~~l~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~l~~l~~~l~~l~ 169 (378)
+..+..+...+ .+|++.|++..+...|..++.+..|+++.|.+. ..|..+.....++.++...|+.+..|.+++..+
T Consensus 35 v~ei~~~kr~t-vld~~s~r~vn~~~n~s~~t~~~rl~~sknq~~--~~~~d~~q~~e~~~~~~~~n~~~~~p~s~~k~~ 111 (326)
T KOG0473|consen 35 VREIASFKRVT-VLDLSSNRLVNLGKNFSILTRLVRLDLSKNQIK--FLPKDAKQQRETVNAASHKNNHSQQPKSQKKEP 111 (326)
T ss_pred hhhhhccceee-eehhhhhHHHhhccchHHHHHHHHHhccHhhHh--hChhhHHHHHHHHHHHhhccchhhCCccccccC
Confidence 34444455666 889999998888788888899999999999987 457778888889999999999999999999999
Q ss_pred CCcEEecCCCCCc
Q psy9862 170 NLQILVLRENDLI 182 (378)
Q Consensus 170 ~L~~L~l~~n~~~ 182 (378)
.+++++..++.+.
T Consensus 112 ~~k~~e~k~~~~~ 124 (326)
T KOG0473|consen 112 HPKKNEQKKTEFF 124 (326)
T ss_pred CcchhhhccCcch
Confidence 9999999999865
No 81
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=88.83 E-value=0.26 Score=26.21 Aligned_cols=18 Identities=44% Similarity=0.752 Sum_probs=15.3
Q ss_pred CCCCEEEeecCCCCcCCh
Q psy9862 315 SRLRELHIQANRLTVLPP 332 (378)
Q Consensus 315 ~~L~~L~l~~n~l~~~~~ 332 (378)
++|++|++++|+++++|+
T Consensus 2 ~~L~~L~vs~N~Lt~LPe 19 (26)
T smart00364 2 PSLKELNVSNNQLTSLPE 19 (26)
T ss_pred cccceeecCCCccccCcc
Confidence 468899999999998886
No 82
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=88.16 E-value=0.39 Score=26.11 Aligned_cols=23 Identities=17% Similarity=-0.016 Sum_probs=14.1
Q ss_pred cCcceeeccCCCCCccchHHhhh
Q psy9862 341 SHKSVLKMDFNPWVTPIADQLQV 363 (378)
Q Consensus 341 ~~l~~l~l~~n~~~~~~~~~~~~ 363 (378)
++|++|+|++|.+.......++.
T Consensus 2 ~~L~~LdL~~N~i~~~G~~~L~~ 24 (28)
T smart00368 2 PSLRELDLSNNKLGDEGARALAE 24 (28)
T ss_pred CccCEEECCCCCCCHHHHHHHHH
Confidence 36667777777776555554443
No 83
>KOG4341|consensus
Probab=86.56 E-value=0.28 Score=45.37 Aligned_cols=84 Identities=23% Similarity=0.226 Sum_probs=45.5
Q ss_pred CccchhccccCCcccc---cCCCCCCCCCcccEEEccCCCC-CCC---CCCcccccCccccEEecCCCCCc--cCCcccc
Q psy9862 96 LPFLFLQFPCRMNRLS---SLPRGFGAFPVLEVLDLTYNNL-NEQ---SLPGNFFMLETLRALYLGDNDFE--VLPAEIG 166 (378)
Q Consensus 96 ~~~l~~~l~l~~~~l~---~~~~~~~~~~~L~~L~l~~n~i-~~~---~~~~~l~~l~~L~~L~l~~n~l~--~l~~~l~ 166 (378)
++.|. .+++.++... ++...-.+++.++++.+++|.. ++. .+...-.+...|..+.+.++... ..-..+.
T Consensus 345 ~~~Le-~l~~e~~~~~~d~tL~sls~~C~~lr~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~ 423 (483)
T KOG4341|consen 345 CPHLE-RLDLEECGLITDGTLASLSRNCPRLRVLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLS 423 (483)
T ss_pred Chhhh-hhcccccceehhhhHhhhccCCchhccCChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHh
Confidence 45555 5555554433 1222234667888888887753 321 01112234556777777777643 2223345
Q ss_pred CCCCCcEEecCCCC
Q psy9862 167 NLKNLQILVLREND 180 (378)
Q Consensus 167 ~l~~L~~L~l~~n~ 180 (378)
.+++|+.+++-.+.
T Consensus 424 ~c~~Leri~l~~~q 437 (483)
T KOG4341|consen 424 ICRNLERIELIDCQ 437 (483)
T ss_pred hCcccceeeeechh
Confidence 66677777766554
No 84
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=83.18 E-value=0.94 Score=24.19 Aligned_cols=17 Identities=29% Similarity=0.618 Sum_probs=13.6
Q ss_pred CCCCCEEEeecCCCCcC
Q psy9862 314 LSRLRELHIQANRLTVL 330 (378)
Q Consensus 314 ~~~L~~L~l~~n~l~~~ 330 (378)
+++|++|+++.|+|+.+
T Consensus 1 L~~L~~L~L~~NkI~~I 17 (26)
T smart00365 1 LTNLEELDLSQNKIKKI 17 (26)
T ss_pred CCccCEEECCCCcccee
Confidence 36789999999988744
No 85
>KOG1947|consensus
Probab=75.93 E-value=0.68 Score=44.70 Aligned_cols=81 Identities=22% Similarity=0.177 Sum_probs=44.7
Q ss_pred CCCcccEEEccCCC-CCCCCCCcccccCccccEEecCCCC-Cc--cCCccccCCCCCcEEecCCCCCc---cCChhhcCC
Q psy9862 119 AFPVLEVLDLTYNN-LNEQSLPGNFFMLETLRALYLGDND-FE--VLPAEIGNLKNLQILVLRENDLI---EIPKELGNL 191 (378)
Q Consensus 119 ~~~~L~~L~l~~n~-i~~~~~~~~l~~l~~L~~L~l~~n~-l~--~l~~~l~~l~~L~~L~l~~n~~~---~l~~~l~~l 191 (378)
.+..++.|+++++. +++..+......+++|+.|.+.+|. ++ .+......++.|++|+++++... .+......+
T Consensus 241 ~~~~L~~l~l~~~~~isd~~l~~l~~~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~~~d~~l~~~~~~c 320 (482)
T KOG1947|consen 241 ICRKLKSLDLSGCGLVTDIGLSALASRCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHGLTDSGLEALLKNC 320 (482)
T ss_pred hcCCcCccchhhhhccCchhHHHHHhhCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCccchHHHHHHHHHhC
Confidence 44677777777777 5543322222336677887766665 33 22233455677888888776543 122223445
Q ss_pred CCCcEEec
Q psy9862 192 TRLRELHI 199 (378)
Q Consensus 192 ~~L~~L~l 199 (378)
++++.+.+
T Consensus 321 ~~l~~l~~ 328 (482)
T KOG1947|consen 321 PNLRELKL 328 (482)
T ss_pred cchhhhhh
Confidence 55555443
No 86
>smart00367 LRR_CC Leucine-rich repeat - CC (cysteine-containing) subfamily.
Probab=75.36 E-value=2.4 Score=22.41 Aligned_cols=21 Identities=14% Similarity=0.121 Sum_probs=15.2
Q ss_pred cccccEEEccccc-ccCchhHH
Q psy9862 52 MLYITRITLSHNK-LKGEIIVQ 72 (378)
Q Consensus 52 ~~~L~~L~ls~~~-l~~~~~~~ 72 (378)
+++|++|++++|. +++.+...
T Consensus 1 c~~L~~L~l~~C~~itD~gl~~ 22 (26)
T smart00367 1 CPNLRELDLSGCTNITDEGLQA 22 (26)
T ss_pred CCCCCEeCCCCCCCcCHHHHHH
Confidence 5789999999984 77644443
No 87
>KOG3763|consensus
Probab=73.84 E-value=1.1 Score=43.09 Aligned_cols=37 Identities=24% Similarity=0.260 Sum_probs=29.1
Q ss_pred hccCCceeeccCCcccCcCccccc-ccccccEEEcccc
Q psy9862 27 EIKNPELELADKGLSSFEELPGLM-NMLYITRITLSHN 63 (378)
Q Consensus 27 ~~~l~~L~l~~~~~~~~~~~~~l~-~~~~L~~L~ls~~ 63 (378)
...+..++|++|.+..++.+..+. ..|+|+.|+|++|
T Consensus 217 ~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N 254 (585)
T KOG3763|consen 217 FPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHN 254 (585)
T ss_pred CcceeeeecccchhhchhhhhHHHHhcchhheeecccc
Confidence 345778888888888877777776 7788888888888
No 88
>KOG3864|consensus
Probab=73.63 E-value=0.7 Score=38.57 Aligned_cols=35 Identities=31% Similarity=0.375 Sum_probs=20.2
Q ss_pred CCcccEEEccCCC-CCCCCCCcccccCccccEEecCC
Q psy9862 120 FPVLEVLDLTYNN-LNEQSLPGNFFMLETLRALYLGD 155 (378)
Q Consensus 120 ~~~L~~L~l~~n~-i~~~~~~~~l~~l~~L~~L~l~~ 155 (378)
.++|++|++++|+ |++.. ...+..+++|+.|.+.+
T Consensus 150 ~~~L~~L~lsgC~rIT~~G-L~~L~~lknLr~L~l~~ 185 (221)
T KOG3864|consen 150 APSLQDLDLSGCPRITDGG-LACLLKLKNLRRLHLYD 185 (221)
T ss_pred ccchheeeccCCCeechhH-HHHHHHhhhhHHHHhcC
Confidence 3667777777665 55422 23455566666666654
No 89
>KOG4242|consensus
Probab=71.11 E-value=28 Score=33.27 Aligned_cols=49 Identities=22% Similarity=0.192 Sum_probs=33.3
Q ss_pred CccchhhhhccCcccc-----ccchhhcCCCCCCEEEeecCCCC--cCChhhccCC
Q psy9862 290 PIADQLQLVLRENDLI-----EIPKELGNLSRLRELHIQANRLT--VLPPEIGNLD 338 (378)
Q Consensus 290 ~~~~l~~L~l~~n~l~-----~l~~~l~~~~~L~~L~l~~n~l~--~~~~~~~~l~ 338 (378)
..+.+.+|++++|..+ -+|.+++....++.+..+.|..+ ++++.....+
T Consensus 438 stqtl~kldisgn~mgd~gap~lpkalq~n~rlr~ipds~n~p~~~gl~p~~~~~p 493 (553)
T KOG4242|consen 438 STQTLAKLDISGNGMGDGGAPPLPKALQSNCRLRPIPDSLNLPEDPGLGPRNEERP 493 (553)
T ss_pred cCcccccccccCCCcccCCCCcCccccCCCCccCCCCCCCCCccccccchhhhhcc
Confidence 3445668889988876 45666677777888888887666 5555544443
No 90
>KOG3763|consensus
Probab=70.66 E-value=3.9 Score=39.52 Aligned_cols=67 Identities=21% Similarity=0.285 Sum_probs=41.6
Q ss_pred cCccchhhhhccCcccccc---chhhcCCCCCCEEEeecC--CCCcCChhhccCCCccCcceeeccCCCCCccc
Q psy9862 289 TPIADQLQLVLRENDLIEI---PKELGNLSRLRELHIQAN--RLTVLPPEIGNLDLASHKSVLKMDFNPWVTPI 357 (378)
Q Consensus 289 ~~~~~l~~L~l~~n~l~~l---~~~l~~~~~L~~L~l~~n--~l~~~~~~~~~l~~~~~l~~l~l~~n~~~~~~ 357 (378)
...|.+..+++++|++-.+ ...-..-|+|+.|+|++| .+... .++..+ ...-++++-+.|||++...
T Consensus 215 ~n~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~~-~el~K~-k~l~Leel~l~GNPlc~tf 286 (585)
T KOG3763|consen 215 ENFPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISSE-SELDKL-KGLPLEELVLEGNPLCTTF 286 (585)
T ss_pred cCCcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcch-hhhhhh-cCCCHHHeeecCCccccch
Confidence 3566777788888877633 222234578999999988 33322 223222 1236788888899886444
No 91
>KOG3864|consensus
Probab=66.94 E-value=1.3 Score=37.12 Aligned_cols=95 Identities=23% Similarity=0.211 Sum_probs=56.1
Q ss_pred CCcccccCCCCCCCCCcccEEEccCCCCCCCCCCcccccCccccEEecCCCC-Cc--cCCccccCCCCCcEEecCCC-CC
Q psy9862 106 RMNRLSSLPRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDND-FE--VLPAEIGNLKNLQILVLREN-DL 181 (378)
Q Consensus 106 ~~~~l~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~l~~l~~L~~L~l~~n~-l~--~l~~~l~~l~~L~~L~l~~n-~~ 181 (378)
+++..-..|.....-..++.+|-+++.|.... -..+.+++.++.|.+.+|. +. .+..--+-.++|+.|++++| +|
T Consensus 86 d~~g~~~lp~~~~~~~~IeaVDAsds~I~~eG-le~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rI 164 (221)
T KOG3864|consen 86 DYNGYFSLPGPNADNVKIEAVDASDSSIMYEG-LEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRI 164 (221)
T ss_pred cccceecCCCCCCCcceEEEEecCCchHHHHH-HHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCee
Confidence 33433334443333456888888888886533 2446777788888887774 22 11111123468888888876 46
Q ss_pred ccC-ChhhcCCCCCcEEeccC
Q psy9862 182 IEI-PKELGNLTRLRELHIQA 201 (378)
Q Consensus 182 ~~l-~~~l~~l~~L~~L~l~~ 201 (378)
++- -..+..+++|+.|.+.+
T Consensus 165 T~~GL~~L~~lknLr~L~l~~ 185 (221)
T KOG3864|consen 165 TDGGLACLLKLKNLRRLHLYD 185 (221)
T ss_pred chhHHHHHHHhhhhHHHHhcC
Confidence 643 23466777777776654
Done!