BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy987
(114 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2BKD|N Chain N, Structure Of The N-Terminal Domain Of Fragile X Mental
Retardation Protein
Length = 134
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%)
Query: 11 ENGAYYKVIVKMIKGDFHVVEYLGCQSTFTEIVPPERMRQKNTNPPIDAKTFHKFDIEVP 70
E ++ V+MIKG+F+V+EY C +T+ EIV ER+R N N P TF K ++VP
Sbjct: 75 EPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTIERLRSVNPNKPATKDTFXKIKLDVP 134
Score = 32.0 bits (71), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 1 MDELEVEVCGENGAYYKVIVKMIKGDFHVVEY 32
M+EL VEV G NGA+YK VK + D V +
Sbjct: 1 MEELVVEVRGSNGAFYKAFVKDVXEDSITVAF 32
>pdb|3KUF|A Chain A, The Crystal Structure Of The Tudor Domains From Fxr1
pdb|3O8V|A Chain A, Crystal Structure Of The Tudor Domains From Fxr1
Length = 131
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 11/74 (14%)
Query: 2 DELEV-------EVCGENGAYYKVIVKMIKGDFHVVEYLGCQSTFTEIVPPERMRQKNTN 54
DE+EV E CG ++ V+M+KG+F+V+EY C +T+ EIV ER+R N N
Sbjct: 62 DEVEVYSRANDQEPCG----WWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQN 117
Query: 55 PPIDAKTFHKFDIE 68
+ TF K ++
Sbjct: 118 KTVKKNTFFKCTVD 131
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 3 ELEVEVCGENGAYYKVIVKMIKGD 26
EL VEV G NGA+YK +K + D
Sbjct: 2 ELTVEVRGSNGAFYKGFIKDVHED 25
>pdb|3H8Z|A Chain A, The Crystal Structure Of The Tudor Domains From Fxr2
Length = 128
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 5 EVEVCGENGAYYKVIVKMIKGDFHVVEYLGCQSTFTEIVPPERMRQKNTNPPIDAKTF 62
E E CG ++ V+ KGDF+V+EY C +T+ EIV ER+R N NP +F
Sbjct: 75 EQEPCG----WWLARVRXXKGDFYVIEYAACDATYNEIVTLERLRPVNPNPLATKGSF 128
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 15/23 (65%)
Query: 4 LEVEVCGENGAYYKVIVKMIKGD 26
L VEV G NGA+YK VK + D
Sbjct: 6 LPVEVRGSNGAFYKGFVKDVHED 28
>pdb|4A02|A Chain A, X-Ray Crystallographic Structure Of Efcbm33a
pdb|4ALC|A Chain A, X-ray Photoreduction Of Polysaccharide Monooxigenase Cbm33
pdb|4ALE|A Chain A, Structure Changes Of Polysaccharide Monooxygenase Cbm33a
From Enterococcus Faecalis By X-ray Induced
Photoreduction.
pdb|4ALQ|A Chain A, X-ray Photoreduction Of Polysaccharide Monooxygenase Cbm33
pdb|4ALR|A Chain A, X-ray Photoreduction Of Polysaccharide Monooxygenase Cbm33
pdb|4ALS|A Chain A, X-ray Photoreduction Of Polysaccharide Monooxygenase Cbm33
pdb|4ALT|A Chain A, X-ray Photoreduction Of Polysaccharide Monooxigenase Cbm33
Length = 166
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 16/57 (28%)
Query: 56 PIDAKT---FHKFDIEV-PLD------------QSDWLISKNGKNTNPPIDAKTFHK 96
P+D +T +HK +I PLD D+ I+KNG N N P+D K F K
Sbjct: 57 PLDEQTATRWHKTNITTGPLDITWNLTAQHRTASWDYYITKNGWNPNQPLDIKNFDK 113
>pdb|3K1Q|A Chain A, Backbone Model Of An Aquareovirus Virion By
Cryo-Electron Microscopy And Bioinformatics
pdb|3IYL|W Chain W, Atomic Cryoem Structure Of A Nonenveloped Virus Suggests
How Penetration Protein Is Primed For Cell Entry
Length = 1299
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 53 TNPPIDAKTFHKFDIEVPLDQSDW 76
T PP++A + H IE PLD DW
Sbjct: 61 TYPPLNAWSPHHAFIENPLDYRDW 84
>pdb|1MUK|A Chain A, Reovirus Lambda3 Native Structure
pdb|1MWH|A Chain A, Reovirus Polymerase Lambda3 Bound To Mrna Cap Analog
pdb|1N1H|A Chain A, Initiation Complex Of Polymerase Lambda3 From Reovirus
pdb|1N35|A Chain A, Lambda3 Elongation Complex With Four Phosphodiester Bond
Formed
pdb|1N38|A Chain A, Reovirus Polymerase Lambda3 Elongation Complex With One
Phosphodiester Bond Formed
pdb|1UON|A Chain A, Reovirus Polymerase Lambda-3 Localized By Electron
Cryomicroscopy Of Virions At 7.6-a Resolution
Length = 1267
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 14/59 (23%)
Query: 23 IKGDFHVVEY----LGCQS-TFTEIVPPERMRQKNTNPPIDAKTFHKFDIEVPLDQSDW 76
+K DF V Y + C S F P E + Q+ T P +I+VP+ Q DW
Sbjct: 355 VKHDFASVRYIRDAMACTSGIFLVRTPTETVLQEYTQSP---------EIKVPIPQKDW 404
>pdb|2CSE|1 Chain 1, Features Of Reovirus Outer-Capsid Protein Mu1 Revealed By
Electron And Image Reconstruction Of The Virion At 7.0-A
Resolution
Length = 1267
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 14/59 (23%)
Query: 23 IKGDFHVVEY----LGCQS-TFTEIVPPERMRQKNTNPPIDAKTFHKFDIEVPLDQSDW 76
+K DF V Y + C S F P E + Q+ T P +I+VP+ Q DW
Sbjct: 355 VKHDFASVRYIRDAMACTSGIFLVRTPTETVLQEYTQSP---------EIKVPIPQKDW 404
>pdb|2BWK|A Chain A, Murine Angiogenin, Sulphate Complex
pdb|2BWL|A Chain A, Murine Angiogenin, Phosphate Complex
Length = 121
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 8 VCGENGAYYKVIVKMIKGDFHVVEYLGCQSTFTEIVPPERMR 49
+CG NG+ Y+ ++M K F V C+ T PP + R
Sbjct: 56 ICGANGSPYRENLRMSKSPFQVTT---CKHTGGSPRPPCQYR 94
>pdb|3RJ5|A Chain A, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
pdb|3RJ5|B Chain B, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
pdb|3RJ9|A Chain A, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
pdb|3RJ9|B Chain B, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
pdb|3RJ9|C Chain C, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
pdb|3RJ9|D Chain D, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
pdb|3RJ9|E Chain E, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
pdb|3RJ9|F Chain F, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
Length = 254
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 44 PPERMRQKNTNPPIDAKTFHKFDIEVPLDQSDWLISK 80
P K NP ++ TFH +D+ VP+ +S L+ K
Sbjct: 42 PTALAELKAINPKVNI-TFHTYDVTVPVAESKKLLKK 77
>pdb|1A4U|A Chain A, Alcohol Dehydrogenase From Drosophila Lebanonensis
pdb|1A4U|B Chain B, Alcohol Dehydrogenase From Drosophila Lebanonensis
pdb|1B16|A Chain A, Alcohol Dehydrogenase From Drosophila Lebanonensis
Ternary Complex With Nad-3-pentanone
pdb|1B16|B Chain B, Alcohol Dehydrogenase From Drosophila Lebanonensis
Ternary Complex With Nad-3-pentanone
pdb|1B14|A Chain A, Alcohol Dehydrogenase From Drosophila Lebanonensis
Binary Complex With Nad+
pdb|1B14|B Chain B, Alcohol Dehydrogenase From Drosophila Lebanonensis
Binary Complex With Nad+
pdb|1B15|A Chain A, Alcohol Dehydrogenase From Drosophila Lebanonensis
Ternary Complex With Nad-Acetone
pdb|1B15|B Chain B, Alcohol Dehydrogenase From Drosophila Lebanonensis
Ternary Complex With Nad-Acetone
pdb|1B2L|A Chain A, Alcohol Dehydrogenase From Drosophila Lebanonensis:
Ternary Complex With Nad-Cyclohexanone
pdb|1SBY|A Chain A, Alcohol Dehydrogenase From Drosophila Lebanonensis
Complexed With Nad+ And 2,2,2-Trifluoroethanol At 1.1 A
Resolution
pdb|1SBY|B Chain B, Alcohol Dehydrogenase From Drosophila Lebanonensis
Complexed With Nad+ And 2,2,2-Trifluoroethanol At 1.1 A
Resolution
Length = 254
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 44 PPERMRQKNTNPPIDAKTFHKFDIEVPLDQSDWLISK 80
P K NP ++ TFH +D+ VP+ +S L+ K
Sbjct: 42 PTALAELKAINPKVNI-TFHTYDVTVPVAESKKLLKK 77
>pdb|3C2Q|A Chain A, Crystal Structure Of Conserved Putative LorSDH PROTEIN
From Methanococcus Maripaludis S2
pdb|3C2Q|B Chain B, Crystal Structure Of Conserved Putative LorSDH PROTEIN
From Methanococcus Maripaludis S2
Length = 345
Score = 26.2 bits (56), Expect = 5.6, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Query: 11 ENGAYYKVIVKMIKGDFHVVEYLGCQSTFTEIVPPERMRQ 50
E A KVI K+ KGDF ++ + G + + PPE+ R+
Sbjct: 60 EKRAETKVIRKVKKGDFVLIGHNGIR-----VXPPEKSRE 94
>pdb|1HXM|A Chain A, Crystal Structure Of A Human Vgamma9VDELTA2 T CELL
RECEPTOR
pdb|1HXM|C Chain C, Crystal Structure Of A Human Vgamma9VDELTA2 T CELL
RECEPTOR
pdb|1HXM|E Chain E, Crystal Structure Of A Human Vgamma9VDELTA2 T CELL
RECEPTOR
pdb|1HXM|G Chain G, Crystal Structure Of A Human Vgamma9VDELTA2 T CELL
RECEPTOR
Length = 229
Score = 26.2 bits (56), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 58 DAKTFHKFDIEVPLDQSDWLISKNGKNTNPP 88
D KT H D EV D +D + K +NT P
Sbjct: 196 DNKTVHSTDFEVKTDSTDHVKPKETENTKQP 226
>pdb|3M1M|A Chain A, Crystal Structure Of The Primase-Polymerase From
Sulfolobus Islandicus
Length = 335
Score = 25.8 bits (55), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 7 EVCGENGAYYKVIVKMIKGDFHVVEYL 33
E+ EN Y V + +GD+HV+ YL
Sbjct: 259 EIICENKTYADVNIDRSRGDWHVILYL 285
>pdb|1PX3|A Chain A, E. Coli (Lacz) Beta-Galactosidase (G794a)
pdb|1PX3|B Chain B, E. Coli (Lacz) Beta-Galactosidase (G794a)
pdb|1PX3|C Chain C, E. Coli (Lacz) Beta-Galactosidase (G794a)
pdb|1PX3|D Chain D, E. Coli (Lacz) Beta-Galactosidase (G794a)
pdb|1PX4|A Chain A, E. Coli (Lacz) Beta-Galactosidase (G794a) With Iptg Bound
pdb|1PX4|B Chain B, E. Coli (Lacz) Beta-Galactosidase (G794a) With Iptg Bound
pdb|1PX4|C Chain C, E. Coli (Lacz) Beta-Galactosidase (G794a) With Iptg Bound
pdb|1PX4|D Chain D, E. Coli (Lacz) Beta-Galactosidase (G794a) With Iptg Bound
Length = 1023
Score = 25.4 bits (54), Expect = 7.7, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 3 ELEVEVCGENGAYYKVIVKMIKGDFHV 29
E EV++CGE Y +V V + +G+ V
Sbjct: 241 EAEVQMCGELRDYLRVTVSLWQGETQV 267
>pdb|1F49|A Chain A, E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained
Monomer- Monoclinic)
pdb|1F49|B Chain B, E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained
Monomer- Monoclinic)
pdb|1F49|C Chain C, E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained
Monomer- Monoclinic)
pdb|1F49|D Chain D, E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained
Monomer- Monoclinic)
pdb|1F49|E Chain E, E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained
Monomer- Monoclinic)
pdb|1F49|F Chain F, E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained
Monomer- Monoclinic)
pdb|1F49|G Chain G, E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained
Monomer- Monoclinic)
pdb|1F49|H Chain H, E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained
Monomer- Monoclinic)
pdb|1GHO|I Chain I, E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained
Monomer- Monoclinic)
pdb|1GHO|J Chain J, E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained
Monomer- Monoclinic)
pdb|1GHO|K Chain K, E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained
Monomer- Monoclinic)
pdb|1GHO|L Chain L, E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained
Monomer- Monoclinic)
pdb|1GHO|M Chain M, E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained
Monomer- Monoclinic)
pdb|1GHO|N Chain N, E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained
Monomer- Monoclinic)
pdb|1GHO|O Chain O, E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained
Monomer- Monoclinic)
pdb|1GHO|P Chain P, E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained
Monomer- Monoclinic)
pdb|1JZ1|I Chain I, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate. Chains I-P, See Remark 400
pdb|1JZ1|J Chain J, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate. Chains I-P, See Remark 400
pdb|1JZ1|K Chain K, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate. Chains I-P, See Remark 400
pdb|1JZ1|L Chain L, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate. Chains I-P, See Remark 400
pdb|1JZ1|M Chain M, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate. Chains I-P, See Remark 400
pdb|1JZ1|N Chain N, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate. Chains I-P, See Remark 400
pdb|1JZ1|O Chain O, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate. Chains I-P, See Remark 400
pdb|1JZ1|P Chain P, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate. Chains I-P, See Remark 400
pdb|1JZ0|A Chain A, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate. Chains A-H, See Remark 400
pdb|1JZ0|B Chain B, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate. Chains A-H, See Remark 400
pdb|1JZ0|C Chain C, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate. Chains A-H, See Remark 400
pdb|1JZ0|D Chain D, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate. Chains A-H, See Remark 400
pdb|1JZ0|E Chain E, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate. Chains A-H, See Remark 400
pdb|1JZ0|F Chain F, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate. Chains A-H, See Remark 400
pdb|1JZ0|G Chain G, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate. Chains A-H, See Remark 400
pdb|1JZ0|H Chain H, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate. Chains A-H, See Remark 400
pdb|1JYZ|I Chain I, E. Coli (Lacz) Beta-Galactosidase In Complex With 2-F-
Lactose. Chains I-P, See Remark 400.
pdb|1JYZ|J Chain J, E. Coli (Lacz) Beta-Galactosidase In Complex With 2-F-
Lactose. Chains I-P, See Remark 400.
pdb|1JYZ|K Chain K, E. Coli (Lacz) Beta-Galactosidase In Complex With 2-F-
Lactose. Chains I-P, See Remark 400.
pdb|1JYZ|L Chain L, E. Coli (Lacz) Beta-Galactosidase In Complex With 2-F-
Lactose. Chains I-P, See Remark 400.
pdb|1JYZ|M Chain M, E. Coli (Lacz) Beta-Galactosidase In Complex With 2-F-
Lactose. Chains I-P, See Remark 400.
pdb|1JYZ|N Chain N, E. Coli (Lacz) Beta-Galactosidase In Complex With 2-F-
Lactose. Chains I-P, See Remark 400.
pdb|1JYZ|O Chain O, E. Coli (Lacz) Beta-Galactosidase In Complex With 2-F-
Lactose. Chains I-P, See Remark 400.
pdb|1JYZ|P Chain P, E. Coli (Lacz) Beta-Galactosidase In Complex With 2-F-
Lactose. Chains I-P, See Remark 400.
pdb|1JYY|A Chain A, E. Coli (Lacz) Beta-Galactosidase In Complex With 2-F-
Lactose. Chains A-H, See Remark 400.
pdb|1JYY|B Chain B, E. Coli (Lacz) Beta-Galactosidase In Complex With 2-F-
Lactose. Chains A-H, See Remark 400.
pdb|1JYY|C Chain C, E. Coli (Lacz) Beta-Galactosidase In Complex With 2-F-
Lactose. Chains A-H, See Remark 400.
pdb|1JYY|D Chain D, E. Coli (Lacz) Beta-Galactosidase In Complex With 2-F-
Lactose. Chains A-H, See Remark 400.
pdb|1JYY|E Chain E, E. Coli (Lacz) Beta-Galactosidase In Complex With 2-F-
Lactose. Chains A-H, See Remark 400.
pdb|1JYY|F Chain F, E. Coli (Lacz) Beta-Galactosidase In Complex With 2-F-
Lactose. Chains A-H, See Remark 400.
pdb|1JYY|G Chain G, E. Coli (Lacz) Beta-Galactosidase In Complex With 2-F-
Lactose. Chains A-H, See Remark 400.
pdb|1JYY|H Chain H, E. Coli (Lacz) Beta-Galactosidase In Complex With 2-F-
Lactose. Chains A-H, See Remark 400
Length = 1023
Score = 25.4 bits (54), Expect = 7.7, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 3 ELEVEVCGENGAYYKVIVKMIKGDFHV 29
E EV++CGE Y +V V + +G+ V
Sbjct: 241 EAEVQMCGELRDYLRVTVSLWQGETQV 267
>pdb|1JZ8|A Chain A, E. Coli (lacz) Beta-galactosidase (e537q) In Complex With
Allolactose
pdb|1JZ8|B Chain B, E. Coli (lacz) Beta-galactosidase (e537q) In Complex With
Allolactose
pdb|1JZ8|C Chain C, E. Coli (lacz) Beta-galactosidase (e537q) In Complex With
Allolactose
pdb|1JZ8|D Chain D, E. Coli (lacz) Beta-galactosidase (e537q) In Complex With
Allolactose
pdb|1JYW|A Chain A, E. Coli (lacz) Beta-galactosidase (e537q) In Complex With
Pnpg
pdb|1JYW|B Chain B, E. Coli (lacz) Beta-galactosidase (e537q) In Complex With
Pnpg
pdb|1JYW|C Chain C, E. Coli (lacz) Beta-galactosidase (e537q) In Complex With
Pnpg
pdb|1JYW|D Chain D, E. Coli (lacz) Beta-galactosidase (e537q) In Complex With
Pnpg
pdb|1JYV|A Chain A, E. Coli (Lacz) Beta-Galactosidase (E537q) In Complex With
Onpg
pdb|1JYV|B Chain B, E. Coli (Lacz) Beta-Galactosidase (E537q) In Complex With
Onpg
pdb|1JYV|C Chain C, E. Coli (Lacz) Beta-Galactosidase (E537q) In Complex With
Onpg
pdb|1JYV|D Chain D, E. Coli (Lacz) Beta-Galactosidase (E537q) In Complex With
Onpg
pdb|1JYN|A Chain A, E. Coli (Lacz) Beta-Galactosidase (E537q) In Complex With
Lactose
pdb|1JYN|B Chain B, E. Coli (Lacz) Beta-Galactosidase (E537q) In Complex With
Lactose
pdb|1JYN|C Chain C, E. Coli (Lacz) Beta-Galactosidase (E537q) In Complex With
Lactose
pdb|1JYN|D Chain D, E. Coli (Lacz) Beta-Galactosidase (E537q) In Complex With
Lactose
Length = 1023
Score = 25.4 bits (54), Expect = 7.7, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 3 ELEVEVCGENGAYYKVIVKMIKGDFHV 29
E EV++CGE Y +V V + +G+ V
Sbjct: 241 EAEVQMCGELRDYLRVTVSLWQGETQV 267
>pdb|3MUY|1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a)
pdb|3MUY|2 Chain 2, E. Coli (Lacz) Beta-Galactosidase (R599a)
pdb|3MUY|3 Chain 3, E. Coli (Lacz) Beta-Galactosidase (R599a)
pdb|3MUY|4 Chain 4, E. Coli (Lacz) Beta-Galactosidase (R599a)
Length = 1023
Score = 25.4 bits (54), Expect = 7.7, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 3 ELEVEVCGENGAYYKVIVKMIKGDFHV 29
E EV++CGE Y +V V + +G+ V
Sbjct: 241 EAEVQMCGELRDYLRVTVSLWQGETQV 267
>pdb|3I3B|A Chain A, E.Coli (Lacz) Beta-Galactosidase (M542a) In Complex With
D- Galactopyranosyl-1-On
pdb|3I3B|B Chain B, E.Coli (Lacz) Beta-Galactosidase (M542a) In Complex With
D- Galactopyranosyl-1-On
pdb|3I3B|C Chain C, E.Coli (Lacz) Beta-Galactosidase (M542a) In Complex With
D- Galactopyranosyl-1-On
pdb|3I3B|D Chain D, E.Coli (Lacz) Beta-Galactosidase (M542a) In Complex With
D- Galactopyranosyl-1-On
pdb|3I3D|A Chain A, E. Coli (Lacz) Beta-Galactosidase (M542a) In Complex With
Iptg
pdb|3I3D|B Chain B, E. Coli (Lacz) Beta-Galactosidase (M542a) In Complex With
Iptg
pdb|3I3D|C Chain C, E. Coli (Lacz) Beta-Galactosidase (M542a) In Complex With
Iptg
pdb|3I3D|D Chain D, E. Coli (Lacz) Beta-Galactosidase (M542a) In Complex With
Iptg
pdb|3I3E|A Chain A, E. Coli (Lacz) Beta-Galactosidase (M542a)
pdb|3I3E|B Chain B, E. Coli (Lacz) Beta-Galactosidase (M542a)
pdb|3I3E|C Chain C, E. Coli (Lacz) Beta-Galactosidase (M542a)
pdb|3I3E|D Chain D, E. Coli (Lacz) Beta-Galactosidase (M542a)
Length = 1023
Score = 25.4 bits (54), Expect = 7.7, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 3 ELEVEVCGENGAYYKVIVKMIKGDFHV 29
E EV++CGE Y +V V + +G+ V
Sbjct: 241 EAEVQMCGELRDYLRVTVSLWQGETQV 267
>pdb|3IAQ|A Chain A, E. Coli (Lacz) Beta-Galactosidase (E416v)
pdb|3IAQ|B Chain B, E. Coli (Lacz) Beta-Galactosidase (E416v)
pdb|3IAQ|C Chain C, E. Coli (Lacz) Beta-Galactosidase (E416v)
pdb|3IAQ|D Chain D, E. Coli (Lacz) Beta-Galactosidase (E416v)
Length = 1023
Score = 25.4 bits (54), Expect = 7.7, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 3 ELEVEVCGENGAYYKVIVKMIKGDFHV 29
E EV++CGE Y +V V + +G+ V
Sbjct: 241 EAEVQMCGELRDYLRVTVSLWQGETQV 267
>pdb|3IAP|A Chain A, E. Coli (Lacz) Beta-Galactosidase (E416q)
pdb|3IAP|B Chain B, E. Coli (Lacz) Beta-Galactosidase (E416q)
pdb|3IAP|C Chain C, E. Coli (Lacz) Beta-Galactosidase (E416q)
pdb|3IAP|D Chain D, E. Coli (Lacz) Beta-Galactosidase (E416q)
Length = 1023
Score = 25.4 bits (54), Expect = 7.7, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 3 ELEVEVCGENGAYYKVIVKMIKGDFHV 29
E EV++CGE Y +V V + +G+ V
Sbjct: 241 EAEVQMCGELRDYLRVTVSLWQGETQV 267
>pdb|3CZJ|A Chain A, "e. Coli (Lacz) Beta-Galactosidase (N460t) In Complex With
D- Galctopyranosyl-1-One"
pdb|3CZJ|B Chain B, "e. Coli (Lacz) Beta-Galactosidase (N460t) In Complex With
D- Galctopyranosyl-1-One"
pdb|3CZJ|C Chain C, "e. Coli (Lacz) Beta-Galactosidase (N460t) In Complex With
D- Galctopyranosyl-1-One"
pdb|3CZJ|D Chain D, "e. Coli (Lacz) Beta-Galactosidase (N460t) In Complex With
D- Galctopyranosyl-1-One"
Length = 1023
Score = 25.4 bits (54), Expect = 7.7, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 3 ELEVEVCGENGAYYKVIVKMIKGDFHV 29
E EV++CGE Y +V V + +G+ V
Sbjct: 241 EAEVQMCGELRDYLRVTVSLWQGETQV 267
>pdb|3DYO|A Chain A, E. Coli (Lacz) Beta-Galactosidase (H418n) In Complex With
Iptg
pdb|3DYO|B Chain B, E. Coli (Lacz) Beta-Galactosidase (H418n) In Complex With
Iptg
pdb|3DYO|C Chain C, E. Coli (Lacz) Beta-Galactosidase (H418n) In Complex With
Iptg
pdb|3DYO|D Chain D, E. Coli (Lacz) Beta-Galactosidase (H418n) In Complex With
Iptg
pdb|3DYP|A Chain A, E. Coli (Lacz) Beta-Galactosidase (H418n)
pdb|3DYP|B Chain B, E. Coli (Lacz) Beta-Galactosidase (H418n)
pdb|3DYP|C Chain C, E. Coli (Lacz) Beta-Galactosidase (H418n)
pdb|3DYP|D Chain D, E. Coli (Lacz) Beta-Galactosidase (H418n)
Length = 1023
Score = 25.4 bits (54), Expect = 7.7, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 3 ELEVEVCGENGAYYKVIVKMIKGDFHV 29
E EV++CGE Y +V V + +G+ V
Sbjct: 241 EAEVQMCGELRDYLRVTVSLWQGETQV 267
>pdb|3DYM|A Chain A, E. Coli (Lacz) Beta-Galactosidase (H418e)
pdb|3DYM|B Chain B, E. Coli (Lacz) Beta-Galactosidase (H418e)
pdb|3DYM|C Chain C, E. Coli (Lacz) Beta-Galactosidase (H418e)
pdb|3DYM|D Chain D, E. Coli (Lacz) Beta-Galactosidase (H418e)
pdb|3E1F|1 Chain 1, E.Coli (Lacz) Beta-Galactosidase (H418e) In Complex With
Galactose
pdb|3E1F|2 Chain 2, E.Coli (Lacz) Beta-Galactosidase (H418e) In Complex With
Galactose
pdb|3E1F|3 Chain 3, E.Coli (Lacz) Beta-Galactosidase (H418e) In Complex With
Galactose
pdb|3E1F|4 Chain 4, E.Coli (Lacz) Beta-Galactosidase (H418e) In Complex With
Galactose
Length = 1023
Score = 25.4 bits (54), Expect = 7.7, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 3 ELEVEVCGENGAYYKVIVKMIKGDFHV 29
E EV++CGE Y +V V + +G+ V
Sbjct: 241 EAEVQMCGELRDYLRVTVSLWQGETQV 267
>pdb|1DP0|A Chain A, E. Coli Beta-Galactosidase At 1.7 Angstrom
pdb|1DP0|B Chain B, E. Coli Beta-Galactosidase At 1.7 Angstrom
pdb|1DP0|C Chain C, E. Coli Beta-Galactosidase At 1.7 Angstrom
pdb|1DP0|D Chain D, E. Coli Beta-Galactosidase At 1.7 Angstrom
pdb|1JZ6|A Chain A, E. Coli (Lacz) Beta-Galactosidase In Complex With Galacto-
Tetrazole
pdb|1JZ6|B Chain B, E. Coli (Lacz) Beta-Galactosidase In Complex With Galacto-
Tetrazole
pdb|1JZ6|C Chain C, E. Coli (Lacz) Beta-Galactosidase In Complex With Galacto-
Tetrazole
pdb|1JZ6|D Chain D, E. Coli (Lacz) Beta-Galactosidase In Complex With Galacto-
Tetrazole
pdb|1JZ5|A Chain A, E. Coli (lacz) Beta-galactosidase In Complex With
D-galctopyranosyl-1- On
pdb|1JZ5|B Chain B, E. Coli (lacz) Beta-galactosidase In Complex With
D-galctopyranosyl-1- On
pdb|1JZ5|C Chain C, E. Coli (lacz) Beta-galactosidase In Complex With
D-galctopyranosyl-1- On
pdb|1JZ5|D Chain D, E. Coli (lacz) Beta-galactosidase In Complex With
D-galctopyranosyl-1- On
pdb|1JZ4|A Chain A, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-Deoxy-
Galactosyl-Enzyme Intermediate (Low Bis-Tris)
pdb|1JZ4|B Chain B, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-Deoxy-
Galactosyl-Enzyme Intermediate (Low Bis-Tris)
pdb|1JZ4|C Chain C, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-Deoxy-
Galactosyl-Enzyme Intermediate (Low Bis-Tris)
pdb|1JZ4|D Chain D, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-Deoxy-
Galactosyl-Enzyme Intermediate (Low Bis-Tris)
pdb|1JZ3|A Chain A, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-Deoxy-
Galactosyl Enzyme Intermediate
pdb|1JZ3|B Chain B, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-Deoxy-
Galactosyl Enzyme Intermediate
pdb|1JZ3|C Chain C, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-Deoxy-
Galactosyl Enzyme Intermediate
pdb|1JZ3|D Chain D, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-Deoxy-
Galactosyl Enzyme Intermediate
pdb|1JYX|A Chain A, E. Coli (Lacz) Beta-Galactosidase In Complex With Iptg
pdb|1JYX|B Chain B, E. Coli (Lacz) Beta-Galactosidase In Complex With Iptg
pdb|1JYX|C Chain C, E. Coli (Lacz) Beta-Galactosidase In Complex With Iptg
pdb|1JYX|D Chain D, E. Coli (Lacz) Beta-Galactosidase In Complex With Iptg
pdb|1HN1|A Chain A, E. Coli (Lac Z) Beta-Galactosidase (Orthorhombic)
pdb|1HN1|B Chain B, E. Coli (Lac Z) Beta-Galactosidase (Orthorhombic)
pdb|1HN1|C Chain C, E. Coli (Lac Z) Beta-Galactosidase (Orthorhombic)
pdb|1HN1|D Chain D, E. Coli (Lac Z) Beta-Galactosidase (Orthorhombic)
Length = 1023
Score = 25.4 bits (54), Expect = 7.7, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 3 ELEVEVCGENGAYYKVIVKMIKGDFHV 29
E EV++CGE Y +V V + +G+ V
Sbjct: 241 EAEVQMCGELRDYLRVTVSLWQGETQV 267
>pdb|1BGM|I Chain I, Beta-Galactosidase (Chains I-P)
pdb|1BGM|J Chain J, Beta-Galactosidase (Chains I-P)
pdb|1BGM|K Chain K, Beta-Galactosidase (Chains I-P)
pdb|1BGM|L Chain L, Beta-Galactosidase (Chains I-P)
pdb|1BGM|M Chain M, Beta-Galactosidase (Chains I-P)
pdb|1BGM|N Chain N, Beta-Galactosidase (Chains I-P)
pdb|1BGM|O Chain O, Beta-Galactosidase (Chains I-P)
pdb|1BGM|P Chain P, Beta-Galactosidase (Chains I-P)
pdb|1BGL|A Chain A, Beta-Galactosidase (Chains A-H)
pdb|1BGL|B Chain B, Beta-Galactosidase (Chains A-H)
pdb|1BGL|C Chain C, Beta-Galactosidase (Chains A-H)
pdb|1BGL|D Chain D, Beta-Galactosidase (Chains A-H)
pdb|1BGL|E Chain E, Beta-Galactosidase (Chains A-H)
pdb|1BGL|F Chain F, Beta-Galactosidase (Chains A-H)
pdb|1BGL|G Chain G, Beta-Galactosidase (Chains A-H)
pdb|1BGL|H Chain H, Beta-Galactosidase (Chains A-H)
pdb|1JZ2|A Chain A, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate (Orthorhombic)
pdb|1JZ2|B Chain B, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate (Orthorhombic)
pdb|1JZ2|C Chain C, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate (Orthorhombic)
pdb|1JZ2|D Chain D, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate (Orthorhombic)
Length = 1023
Score = 25.4 bits (54), Expect = 7.8, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 3 ELEVEVCGENGAYYKVIVKMIKGDFHV 29
E EV++CGE Y +V V + +G+ V
Sbjct: 241 EAEVQMCGELRDYLRVTVSLWQGETQV 267
>pdb|1F4A|A Chain A, E. Coli (Lacz) Beta-Galactosidase (Ncs Constrained
Monomer- Orthorhombic)
pdb|1F4A|B Chain B, E. Coli (Lacz) Beta-Galactosidase (Ncs Constrained
Monomer- Orthorhombic)
pdb|1F4A|C Chain C, E. Coli (Lacz) Beta-Galactosidase (Ncs Constrained
Monomer- Orthorhombic)
pdb|1F4A|D Chain D, E. Coli (Lacz) Beta-Galactosidase (Ncs Constrained
Monomer- Orthorhombic)
pdb|1F4H|A Chain A, E. Coli (Lacz) Beta-Galactosidase (Orthorhombic)
pdb|1F4H|B Chain B, E. Coli (Lacz) Beta-Galactosidase (Orthorhombic)
pdb|1F4H|C Chain C, E. Coli (Lacz) Beta-Galactosidase (Orthorhombic)
pdb|1F4H|D Chain D, E. Coli (Lacz) Beta-Galactosidase (Orthorhombic)
Length = 1021
Score = 25.4 bits (54), Expect = 7.8, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 3 ELEVEVCGENGAYYKVIVKMIKGDFHV 29
E EV++CGE Y +V V + +G+ V
Sbjct: 239 EAEVQMCGELRDYLRVTVSLWQGETQV 265
>pdb|3T2O|A Chain A, E. Coli (Lacz) Beta-Galactosidase (S796d)
pdb|3T2O|B Chain B, E. Coli (Lacz) Beta-Galactosidase (S796d)
pdb|3T2O|C Chain C, E. Coli (Lacz) Beta-Galactosidase (S796d)
pdb|3T2O|D Chain D, E. Coli (Lacz) Beta-Galactosidase (S796d)
pdb|3T2P|A Chain A, E. Coli (Lacz) Beta-Galactosidase (S796d) In Complex With
Iptg
pdb|3T2P|B Chain B, E. Coli (Lacz) Beta-Galactosidase (S796d) In Complex With
Iptg
pdb|3T2P|C Chain C, E. Coli (Lacz) Beta-Galactosidase (S796d) In Complex With
Iptg
pdb|3T2P|D Chain D, E. Coli (Lacz) Beta-Galactosidase (S796d) In Complex With
Iptg
pdb|3T2Q|A Chain A, E. Coli (Lacz) Beta-Galactosidase (S796d) In Complex With
Galactonolactone
pdb|3T2Q|B Chain B, E. Coli (Lacz) Beta-Galactosidase (S796d) In Complex With
Galactonolactone
pdb|3T2Q|C Chain C, E. Coli (Lacz) Beta-Galactosidase (S796d) In Complex With
Galactonolactone
pdb|3T2Q|D Chain D, E. Coli (Lacz) Beta-Galactosidase (S796d) In Complex With
Galactonolactone
Length = 1052
Score = 25.4 bits (54), Expect = 7.8, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 3 ELEVEVCGENGAYYKVIVKMIKGDFHV 29
E EV++CGE Y +V V + +G+ V
Sbjct: 270 EAEVQMCGELRDYLRVTVSLWQGETQV 296
>pdb|3VDA|A Chain A, E. Coli (Lacz) Beta-Galactosidase (N460t)
pdb|3VDA|B Chain B, E. Coli (Lacz) Beta-Galactosidase (N460t)
pdb|3VDA|C Chain C, E. Coli (Lacz) Beta-Galactosidase (N460t)
pdb|3VDA|D Chain D, E. Coli (Lacz) Beta-Galactosidase (N460t)
pdb|3VDB|A Chain A, E. Coli (Lacz) Beta-Galactosidase (N460t) In Complex With
Galactonolactone
pdb|3VDB|B Chain B, E. Coli (Lacz) Beta-Galactosidase (N460t) In Complex With
Galactonolactone
pdb|3VDB|C Chain C, E. Coli (Lacz) Beta-Galactosidase (N460t) In Complex With
Galactonolactone
pdb|3VDB|D Chain D, E. Coli (Lacz) Beta-Galactosidase (N460t) In Complex With
Galactonolactone
pdb|3VDC|A Chain A, E. Coli (Lacz) Beta-Galactosidase (N460t) In Complex With
Iptg
pdb|3VDC|B Chain B, E. Coli (Lacz) Beta-Galactosidase (N460t) In Complex With
Iptg
pdb|3VDC|C Chain C, E. Coli (Lacz) Beta-Galactosidase (N460t) In Complex With
Iptg
pdb|3VDC|D Chain D, E. Coli (Lacz) Beta-Galactosidase (N460t) In Complex With
Iptg
Length = 1052
Score = 25.4 bits (54), Expect = 7.9, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 3 ELEVEVCGENGAYYKVIVKMIKGDFHV 29
E EV++CGE Y +V V + +G+ V
Sbjct: 270 EAEVQMCGELRDYLRVTVSLWQGETQV 296
>pdb|3VD5|A Chain A, E. Coli (Lacz) Beta-Galactosidase (N460s)
pdb|3VD5|C Chain C, E. Coli (Lacz) Beta-Galactosidase (N460s)
pdb|3VD5|D Chain D, E. Coli (Lacz) Beta-Galactosidase (N460s)
pdb|3VD5|B Chain B, E. Coli (Lacz) Beta-Galactosidase (N460s)
pdb|3VD7|A Chain A, E. Coli (Lacz) Beta-Galactosidase (N460s) In Complex With
Galactotetrazole
pdb|3VD7|B Chain B, E. Coli (Lacz) Beta-Galactosidase (N460s) In Complex With
Galactotetrazole
pdb|3VD7|C Chain C, E. Coli (Lacz) Beta-Galactosidase (N460s) In Complex With
Galactotetrazole
pdb|3VD7|D Chain D, E. Coli (Lacz) Beta-Galactosidase (N460s) In Complex With
Galactotetrazole
pdb|3VD9|A Chain A, E. Coli (Lacz) Beta-Galactosidase (N460s) In Complex With
Iptg
pdb|3VD9|B Chain B, E. Coli (Lacz) Beta-Galactosidase (N460s) In Complex With
Iptg
pdb|3VD9|C Chain C, E. Coli (Lacz) Beta-Galactosidase (N460s) In Complex With
Iptg
pdb|3VD9|D Chain D, E. Coli (Lacz) Beta-Galactosidase (N460s) In Complex With
Iptg
Length = 1052
Score = 25.4 bits (54), Expect = 7.9, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 3 ELEVEVCGENGAYYKVIVKMIKGDFHV 29
E EV++CGE Y +V V + +G+ V
Sbjct: 270 EAEVQMCGELRDYLRVTVSLWQGETQV 296
>pdb|3VD3|A Chain A, E. Coli (Lacz) Beta-Galactosidase (N460d)
pdb|3VD3|B Chain B, E. Coli (Lacz) Beta-Galactosidase (N460d)
pdb|3VD3|C Chain C, E. Coli (Lacz) Beta-Galactosidase (N460d)
pdb|3VD3|D Chain D, E. Coli (Lacz) Beta-Galactosidase (N460d)
pdb|3VD4|A Chain A, E. Coli (Lacz) Beta-Galactosidase (N460d) In Complex With
Iptg
pdb|3VD4|B Chain B, E. Coli (Lacz) Beta-Galactosidase (N460d) In Complex With
Iptg
pdb|3VD4|C Chain C, E. Coli (Lacz) Beta-Galactosidase (N460d) In Complex With
Iptg
pdb|3VD4|D Chain D, E. Coli (Lacz) Beta-Galactosidase (N460d) In Complex With
Iptg
Length = 1052
Score = 25.4 bits (54), Expect = 7.9, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 3 ELEVEVCGENGAYYKVIVKMIKGDFHV 29
E EV++CGE Y +V V + +G+ V
Sbjct: 270 EAEVQMCGELRDYLRVTVSLWQGETQV 296
>pdb|3T0A|A Chain A, E. Coli (Lacz) Beta-Galactosidase (S796t)
pdb|3T0A|B Chain B, E. Coli (Lacz) Beta-Galactosidase (S796t)
pdb|3T0A|C Chain C, E. Coli (Lacz) Beta-Galactosidase (S796t)
pdb|3T0A|D Chain D, E. Coli (Lacz) Beta-Galactosidase (S796t)
pdb|3T0B|A Chain A, E. Coli (Lacz) Beta-Galactosidase (S796t) Iptg Complex
pdb|3T0B|B Chain B, E. Coli (Lacz) Beta-Galactosidase (S796t) Iptg Complex
pdb|3T0B|C Chain C, E. Coli (Lacz) Beta-Galactosidase (S796t) Iptg Complex
pdb|3T0B|D Chain D, E. Coli (Lacz) Beta-Galactosidase (S796t) Iptg Complex
pdb|3T0D|A Chain A, E.Coli (Lacz) Beta-Galactosidase (S796t) In Complex With
Galactonolactone
pdb|3T0D|B Chain B, E.Coli (Lacz) Beta-Galactosidase (S796t) In Complex With
Galactonolactone
pdb|3T0D|C Chain C, E.Coli (Lacz) Beta-Galactosidase (S796t) In Complex With
Galactonolactone
pdb|3T0D|D Chain D, E.Coli (Lacz) Beta-Galactosidase (S796t) In Complex With
Galactonolactone
Length = 1052
Score = 25.4 bits (54), Expect = 7.9, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 3 ELEVEVCGENGAYYKVIVKMIKGDFHV 29
E EV++CGE Y +V V + +G+ V
Sbjct: 270 EAEVQMCGELRDYLRVTVSLWQGETQV 296
>pdb|3SEP|A Chain A, E. Coli (Lacz) Beta-Galactosidase (S796a)
pdb|3SEP|B Chain B, E. Coli (Lacz) Beta-Galactosidase (S796a)
pdb|3SEP|C Chain C, E. Coli (Lacz) Beta-Galactosidase (S796a)
pdb|3SEP|D Chain D, E. Coli (Lacz) Beta-Galactosidase (S796a)
pdb|3T08|A Chain A, E. Coli (Lacz) Beta-Galactosidase (S796a) Iptg Complex
pdb|3T08|B Chain B, E. Coli (Lacz) Beta-Galactosidase (S796a) Iptg Complex
pdb|3T08|C Chain C, E. Coli (Lacz) Beta-Galactosidase (S796a) Iptg Complex
pdb|3T08|D Chain D, E. Coli (Lacz) Beta-Galactosidase (S796a) Iptg Complex
pdb|3T09|A Chain A, E. Coli (Lacz) Beta-Galactosidase (S796a) Galactonolactone
Complex
pdb|3T09|B Chain B, E. Coli (Lacz) Beta-Galactosidase (S796a) Galactonolactone
Complex
pdb|3T09|C Chain C, E. Coli (Lacz) Beta-Galactosidase (S796a) Galactonolactone
Complex
pdb|3T09|D Chain D, E. Coli (Lacz) Beta-Galactosidase (S796a) Galactonolactone
Complex
Length = 1052
Score = 25.4 bits (54), Expect = 7.9, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 3 ELEVEVCGENGAYYKVIVKMIKGDFHV 29
E EV++CGE Y +V V + +G+ V
Sbjct: 270 EAEVQMCGELRDYLRVTVSLWQGETQV 296
>pdb|3MUZ|1 Chain 1, E.Coli (Lacz) Beta-Galactosidase (R599a) In Complex With
Iptg
pdb|3MUZ|2 Chain 2, E.Coli (Lacz) Beta-Galactosidase (R599a) In Complex With
Iptg
pdb|3MUZ|3 Chain 3, E.Coli (Lacz) Beta-Galactosidase (R599a) In Complex With
Iptg
pdb|3MUZ|4 Chain 4, E.Coli (Lacz) Beta-Galactosidase (R599a) In Complex With
Iptg
pdb|3MV0|1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) In Complex With
D- Galctopyranosyl-1-One
pdb|3MV0|2 Chain 2, E. Coli (Lacz) Beta-Galactosidase (R599a) In Complex With
D- Galctopyranosyl-1-One
pdb|3MV0|3 Chain 3, E. Coli (Lacz) Beta-Galactosidase (R599a) In Complex With
D- Galctopyranosyl-1-One
pdb|3MV0|4 Chain 4, E. Coli (Lacz) Beta-Galactosidase (R599a) In Complex With
D- Galctopyranosyl-1-One
pdb|3MV1|1 Chain 1, E.Coli (Lacz) Beta-Galactosidase (R599a) In Complex With
Guanidinium
pdb|3MV1|2 Chain 2, E.Coli (Lacz) Beta-Galactosidase (R599a) In Complex With
Guanidinium
pdb|3MV1|3 Chain 3, E.Coli (Lacz) Beta-Galactosidase (R599a) In Complex With
Guanidinium
pdb|3MV1|4 Chain 4, E.Coli (Lacz) Beta-Galactosidase (R599a) In Complex With
Guanidinium
Length = 1052
Score = 25.4 bits (54), Expect = 7.9, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 3 ELEVEVCGENGAYYKVIVKMIKGDFHV 29
E EV++CGE Y +V V + +G+ V
Sbjct: 270 EAEVQMCGELRDYLRVTVSLWQGETQV 296
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.139 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,818,801
Number of Sequences: 62578
Number of extensions: 150165
Number of successful extensions: 303
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 269
Number of HSP's gapped (non-prelim): 40
length of query: 114
length of database: 14,973,337
effective HSP length: 77
effective length of query: 37
effective length of database: 10,154,831
effective search space: 375728747
effective search space used: 375728747
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 45 (21.9 bits)