Query psy987
Match_columns 114
No_of_seqs 93 out of 95
Neff 4.8
Searched_HMMs 29240
Date Fri Aug 16 21:44:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy987.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/987hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3h8z_A FragIle X mental retard 99.9 4.1E-28 1.4E-32 176.0 7.4 94 1-94 3-128 (128)
2 3h8z_A FragIle X mental retard 99.8 3.2E-19 1.1E-23 129.2 7.0 59 4-62 65-128 (128)
3 1mhn_A SurviVal motor neuron p 97.4 0.0004 1.4E-08 42.8 6.1 41 11-53 16-58 (59)
4 4a4f_A SurviVal of motor neuro 97.2 0.00076 2.6E-08 42.3 5.6 40 11-52 21-62 (64)
5 1g5v_A SurviVal motor neuron p 97.1 0.001 3.5E-08 44.8 5.9 41 11-53 23-65 (88)
6 2equ_A PHD finger protein 20-l 96.9 0.0018 6.2E-08 42.3 5.2 41 10-53 20-61 (74)
7 2d9t_A Tudor domain-containing 96.8 0.0037 1.3E-07 40.7 6.3 42 11-54 22-65 (78)
8 3s6w_A Tudor domain-containing 96.7 0.0026 8.9E-08 38.3 4.8 40 10-51 13-54 (54)
9 2eqm_A PHD finger protein 20-l 96.7 0.007 2.4E-07 40.5 7.0 49 4-52 24-76 (88)
10 3sd4_A PHD finger protein 20; 96.5 0.0078 2.7E-07 38.2 6.2 49 3-51 16-68 (69)
11 3pnw_C Tudor domain-containing 96.5 0.0051 1.7E-07 40.1 5.3 41 11-53 30-72 (77)
12 2f5k_A MORF-related gene 15 is 95.9 0.011 3.6E-07 41.0 4.6 41 12-52 34-78 (102)
13 3m9q_A Protein MALE-specific l 95.6 0.017 5.7E-07 40.0 4.6 41 12-52 36-85 (101)
14 2lcc_A AT-rich interactive dom 95.6 0.012 3.9E-07 38.5 3.6 41 12-52 21-65 (76)
15 3fdr_A Tudor and KH domain-con 95.5 0.024 8.3E-07 37.1 5.1 41 11-53 40-81 (94)
16 2eqk_A Tudor domain-containing 94.7 0.049 1.7E-06 36.7 4.8 41 12-53 35-75 (85)
17 3m9p_A MALE-specific lethal 3 94.6 0.043 1.5E-06 38.5 4.4 40 13-52 37-85 (110)
18 2diq_A Tudor and KH domain-con 94.5 0.031 1.1E-06 37.6 3.5 40 11-52 45-85 (110)
19 3p8d_A Medulloblastoma antigen 94.5 0.086 2.9E-06 33.9 5.4 41 11-54 18-59 (67)
20 2ldm_A Uncharacterized protein 93.4 0.0074 2.5E-07 40.3 0.0 39 12-53 19-58 (81)
21 2eko_A Histone acetyltransfera 94.2 0.048 1.6E-06 36.6 3.8 41 11-51 25-69 (87)
22 2wac_A CG7008-PA; unknown func 94.1 0.089 3.1E-06 38.2 5.4 55 12-68 65-119 (218)
23 3qii_A PHD finger protein 20; 93.7 0.15 5.1E-06 34.3 5.4 44 8-54 30-74 (85)
24 2k3y_A Chromatin modification- 92.7 0.15 5E-06 36.9 4.5 26 27-52 78-103 (136)
25 2lrq_A Protein MRG15, NUA4 com 91.8 0.022 7.4E-07 38.0 0.0 42 12-53 24-69 (85)
26 1wgs_A MYST histone acetyltran 92.5 0.22 7.4E-06 35.5 5.1 40 12-51 25-70 (133)
27 2ro0_A Histone acetyltransfera 91.9 0.25 8.5E-06 33.3 4.6 40 12-51 35-78 (92)
28 1wjq_A KIAA1798 protein; MBT d 91.5 0.3 1E-05 33.8 4.8 48 5-52 19-70 (107)
29 2hqx_A P100 CO-activator tudor 91.2 0.43 1.5E-05 35.6 5.8 39 12-52 78-117 (246)
30 3oa6_A MALE-specific lethal 3 91.1 0.23 7.9E-06 34.7 3.9 40 13-52 37-85 (110)
31 2bud_A Males-absent on the fir 90.5 0.49 1.7E-05 32.1 5.0 45 8-52 23-74 (92)
32 2rnz_A Histone acetyltransfera 90.2 0.53 1.8E-05 32.0 4.9 40 12-51 37-80 (94)
33 4b9w_A TDRD1, tudor domain-con 89.4 0.54 1.8E-05 34.4 4.9 41 11-53 78-119 (201)
34 3ntk_A Maternal protein tudor; 88.8 0.71 2.4E-05 33.0 5.1 38 11-52 60-98 (169)
35 4b9x_A TDRD1, tudor domain-con 88.2 0.75 2.6E-05 34.2 5.1 42 10-53 77-119 (226)
36 2xk0_A Polycomb protein PCL; t 87.6 1.1 3.9E-05 29.0 4.9 41 6-49 22-62 (69)
37 2r58_A Polycomb protein SCM; M 87.4 0.95 3.3E-05 35.5 5.4 49 4-52 148-200 (265)
38 4hcz_A PHD finger protein 1; p 85.1 2.4 8.2E-05 26.6 5.3 29 6-34 10-40 (58)
39 1wjr_A KIAA1617 protein; MBT d 83.5 1.3 4.6E-05 31.1 4.1 44 9-52 23-70 (127)
40 2biv_A SCML2 protein, sex COMB 83.5 2 6.8E-05 33.2 5.4 42 4-45 176-219 (243)
41 3e9g_A Chromatin modification- 82.3 1.8 6.3E-05 31.0 4.5 26 27-52 76-101 (130)
42 3bdl_A Staphylococcal nuclease 82.2 2.1 7.2E-05 36.0 5.5 40 12-53 424-464 (570)
43 2e5p_A Protein PHF1, PHD finge 81.7 3.7 0.00013 26.5 5.3 29 6-34 16-46 (68)
44 2eqj_A Metal-response element- 80.2 3 0.0001 26.7 4.5 26 9-34 23-50 (66)
45 2biv_A SCML2 protein, sex COMB 79.6 2.2 7.4E-05 33.0 4.4 49 4-52 67-119 (243)
46 2m0o_A PHD finger protein 1; t 79.2 2.6 9E-05 27.9 4.0 29 6-34 33-63 (79)
47 1oz2_A Lethal(3)malignant brai 79.0 2.7 9.3E-05 33.7 4.9 36 11-46 266-301 (331)
48 2e5q_A PHD finger protein 19; 77.0 3.2 0.00011 26.4 3.8 29 6-34 14-44 (63)
49 2r58_A Polycomb protein SCM; M 75.6 3.4 0.00011 32.4 4.4 41 11-51 48-90 (265)
50 3ut1_A Lethal(3)malignant brai 73.7 5.7 0.00019 31.8 5.4 37 10-46 260-296 (324)
51 3dlm_A Histone-lysine N-methyl 71.9 4.4 0.00015 31.2 4.2 24 12-35 170-193 (213)
52 1oz2_A Lethal(3)malignant brai 71.1 7.6 0.00026 31.0 5.6 48 5-52 154-205 (331)
53 3h6z_A Polycomb protein SFMBT; 70.0 5.8 0.0002 33.2 4.9 38 9-46 388-425 (447)
54 2d7n_A Filamin-C; beta-sandwic 66.9 7.2 0.00025 25.5 3.9 33 2-34 22-54 (93)
55 2ee9_A Filamin-B; beta-sandwic 63.7 7.3 0.00025 25.8 3.5 33 2-34 30-62 (95)
56 3f70_A Lethal(3)malignant brai 63.0 12 0.00041 31.3 5.5 36 10-45 379-414 (456)
57 3cnk_A Filamin-A; FLNA24, X-RA 61.2 15 0.00051 23.0 4.6 33 2-34 30-62 (89)
58 3rgh_A Filamin-A; cell adhesio 57.9 16 0.00053 23.7 4.3 33 2-34 39-71 (100)
59 3ut1_A Lethal(3)malignant brai 54.8 15 0.00051 29.3 4.5 36 11-46 157-192 (324)
60 2dia_A Filamin-B; beta-sandwic 54.7 18 0.00062 23.7 4.3 33 2-34 42-74 (113)
61 2dlg_A Filamin-B; beta-sandwic 53.0 17 0.00059 24.0 3.9 33 2-34 31-63 (102)
62 2l8d_A Lamin-B receptor; DNA b 51.3 45 0.0015 21.2 5.6 38 10-51 22-61 (66)
63 2e9j_A Filamin-B; beta-sandwic 50.2 16 0.00054 24.3 3.4 33 2-34 54-86 (119)
64 1v05_A Filamin C; actin-bindin 50.0 22 0.00076 22.5 4.0 33 2-34 37-69 (96)
65 3feo_A MBT domain-containing p 48.1 27 0.00091 29.0 5.1 33 11-43 376-408 (437)
66 2daq_A WHSC1L1 protein, isofor 47.0 23 0.00078 23.3 3.8 43 7-53 18-72 (110)
67 2jz2_A SSL0352 protein; SH3-li 46.0 37 0.0013 21.6 4.4 41 4-44 6-50 (66)
68 2i0n_A Class VII unconventiona 45.8 18 0.00063 22.1 3.0 10 11-20 42-51 (80)
69 2ds4_A Tripartite motif protei 45.7 42 0.0014 21.4 4.9 42 3-44 50-94 (113)
70 3db3_A E3 ubiquitin-protein li 45.1 89 0.0031 22.9 7.5 63 6-68 17-120 (161)
71 2dig_A Lamin-B receptor; tudor 43.8 61 0.0021 20.7 5.5 40 10-53 25-66 (68)
72 2d7m_A Filamin-C; beta-sandwic 43.7 27 0.00092 22.9 3.8 33 2-34 44-76 (115)
73 2hl0_A Threonyl-tRNA synthetas 42.9 21 0.00073 25.8 3.3 23 6-28 110-132 (143)
74 3cgm_A SLYD, peptidyl-prolyl C 42.1 58 0.002 22.9 5.6 29 5-33 90-118 (158)
75 2g3r_A Tumor suppressor P53-bi 41.5 54 0.0019 23.1 5.2 39 11-49 17-59 (123)
76 2dmc_A Filamin-B; beta-sandwic 40.8 32 0.0011 23.0 3.8 33 2-34 45-77 (116)
77 3ask_A E3 ubiquitin-protein li 39.7 53 0.0018 25.1 5.3 47 6-52 9-67 (226)
78 2qqr_A JMJC domain-containing 39.5 90 0.0031 21.6 6.0 27 8-34 14-41 (118)
79 2dib_A Filamin-B; beta-sandwic 38.8 49 0.0017 21.9 4.5 43 2-44 57-100 (128)
80 4dt4_A FKBP-type 16 kDa peptid 38.2 92 0.0032 22.3 6.2 31 4-34 117-147 (169)
81 2dj4_A Filamin-B; beta-sandwic 36.3 30 0.001 22.5 3.0 33 2-34 43-75 (108)
82 3nme_A Ptpkis1 protein, SEX4 g 36.2 52 0.0018 25.2 4.8 42 5-47 183-229 (294)
83 2dmb_A Filamin-B; beta-sandwic 36.0 29 0.00099 23.4 3.0 33 2-34 43-75 (124)
84 1qfh_A Protein (gelation facto 35.8 1E+02 0.0034 21.9 6.1 43 2-45 135-178 (212)
85 3d0f_A Penicillin-binding 1 tr 35.1 50 0.0017 21.4 4.0 26 10-35 31-56 (106)
86 2kr7_A FKBP-type peptidyl-prol 32.6 1.2E+02 0.0042 20.9 6.2 47 4-50 98-146 (151)
87 2xdp_A Lysine-specific demethy 32.3 38 0.0013 23.7 3.2 39 10-48 17-60 (123)
88 3f70_A Lethal(3)malignant brai 31.4 64 0.0022 26.9 4.9 40 4-43 158-199 (456)
89 2w0p_A Filamin-A; alternative 31.2 67 0.0023 20.1 4.0 31 2-34 34-64 (94)
90 2di9_A Filamin-B; beta-sandwic 30.5 75 0.0026 21.4 4.4 31 2-34 62-92 (131)
91 2k8i_A SLYD, peptidyl-prolyl C 30.4 85 0.0029 22.4 4.9 29 4-33 94-122 (171)
92 3h6z_A Polycomb protein SFMBT; 30.4 71 0.0024 26.6 5.0 42 11-52 61-105 (447)
93 2iim_A Proto-oncogene tyrosine 29.9 40 0.0014 19.2 2.6 15 6-20 31-45 (62)
94 1g2b_A Spectrin alpha chain; c 28.7 43 0.0015 19.2 2.6 15 6-20 46-61 (62)
95 2d7p_A Filamin-C; beta-sandwic 28.6 32 0.0011 22.9 2.1 32 3-34 42-73 (112)
96 2eea_A Filamin-B; beta-sandwic 27.8 40 0.0014 22.1 2.5 31 2-34 52-82 (115)
97 2j6f_A CD2-associated protein; 27.4 25 0.00086 20.2 1.3 10 11-20 33-42 (62)
98 3eg3_A Proto-oncogene tyrosine 27.3 56 0.0019 18.4 2.9 11 10-20 36-46 (63)
99 2ee6_A Filamin-B; beta-sandwic 27.0 35 0.0012 22.0 2.1 31 2-34 42-72 (105)
100 2vkn_A Protein SSU81; membrane 26.9 49 0.0017 19.4 2.6 15 6-20 32-46 (70)
101 2jxb_A T-cell surface glycopro 26.9 45 0.0015 20.6 2.6 15 6-20 56-70 (86)
102 3fke_A Polymerase cofactor VP3 26.6 34 0.0012 24.2 2.0 23 46-68 98-120 (129)
103 2oaw_A Spectrin alpha chain, b 26.2 79 0.0027 17.9 3.4 11 12-22 33-43 (65)
104 2ydl_A SH3 domain-containing k 26.1 33 0.0011 20.5 1.7 15 6-20 27-44 (69)
105 2k7p_A Filamin-A; IG-like, ABP 26.1 85 0.0029 22.3 4.2 33 2-34 34-66 (188)
106 1tg0_A BBC1 protein, myosin ta 25.9 59 0.002 18.9 2.8 17 6-22 32-49 (68)
107 1wlh_A Gelation factor; ABP-12 25.3 1.7E+02 0.0059 21.8 6.1 44 2-46 234-278 (311)
108 1uff_A Intersectin 2; beta bar 25.0 30 0.001 21.7 1.5 16 6-21 30-48 (93)
109 3feo_A MBT domain-containing p 24.6 1.4E+02 0.0049 24.6 5.8 50 3-52 46-104 (437)
110 2dic_A Filamin-B; beta-sandwic 24.0 80 0.0027 20.3 3.5 30 3-34 43-72 (105)
111 2k2m_A EPS8-like protein 1; al 23.6 58 0.002 19.0 2.5 15 6-20 33-47 (68)
112 2k9g_A SH3 domain-containing k 23.5 39 0.0013 20.0 1.7 15 6-20 34-51 (73)
113 3qoq_A Alginate and motility r 23.3 52 0.0018 20.7 2.3 25 85-109 10-34 (69)
114 2k7p_A Filamin-A; IG-like, ABP 23.0 1.9E+02 0.0064 20.4 5.6 41 2-44 128-169 (188)
115 1y0m_A 1-phosphatidylinositol- 22.9 47 0.0016 18.9 1.9 10 12-21 35-44 (61)
116 1qfh_A Protein (gelation facto 22.6 1.5E+02 0.005 21.1 4.9 42 2-43 44-86 (212)
117 2l89_A PWWP domain-containing 22.1 95 0.0032 20.5 3.6 37 14-52 20-68 (108)
118 1csk_A C-SRC SH3 domain; phosp 22.0 65 0.0022 18.8 2.5 9 11-19 43-51 (71)
119 1i07_A Epidermal growth factor 21.9 50 0.0017 18.7 1.9 15 6-20 26-40 (60)
120 2cud_A SRC-like-adapter; SH3 d 21.8 42 0.0015 20.4 1.6 15 6-20 42-56 (79)
121 1oot_A Hypothetical 40.4 kDa p 21.5 80 0.0027 17.7 2.8 9 12-20 37-45 (60)
122 2jt4_A Cytoskeleton assembly c 21.4 80 0.0027 18.3 2.8 9 12-20 39-47 (71)
123 2bp3_A Filamin A; structural p 21.4 1.2E+02 0.0042 18.9 3.9 30 3-34 38-67 (97)
124 1ssf_A Transformation related 21.3 69 0.0024 23.5 2.9 24 12-35 22-46 (156)
125 2jte_A CD2-associated protein; 21.3 47 0.0016 19.0 1.7 9 12-20 40-48 (64)
126 2kxd_A 11-MER peptide, SH3 dom 21.1 47 0.0016 19.7 1.7 8 12-19 31-38 (73)
127 2k9u_A Gamma filamin; cytoskel 20.8 85 0.0029 20.6 3.1 30 3-34 50-79 (119)
128 1u5s_A Cytoplasmic protein NCK 20.8 66 0.0023 18.7 2.3 9 11-19 39-47 (71)
129 4fu6_A PC4 and SFRS1-interacti 20.7 45 0.0015 23.3 1.8 40 8-51 33-79 (153)
130 1wxt_A Hypothetical protein FL 20.6 73 0.0025 18.5 2.5 15 6-20 32-46 (68)
131 1ri0_A Hepatoma-derived growth 20.5 71 0.0024 21.3 2.7 36 14-51 34-76 (110)
132 2kgt_A Tyrosine-protein kinase 20.4 53 0.0018 19.2 1.8 10 12-21 41-50 (72)
133 2b86_A Cytoplasmic protein NCK 20.3 45 0.0015 19.9 1.5 15 6-20 29-43 (67)
134 1n0e_A Protein MRAZ; cell divi 20.3 42 0.0014 24.4 1.6 16 98-113 111-126 (166)
135 2gfu_A DNA mismatch repair pro 20.1 58 0.002 22.2 2.2 40 14-54 37-87 (134)
No 1
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*
Probab=99.95 E-value=4.1e-28 Score=176.02 Aligned_cols=94 Identities=23% Similarity=0.238 Sum_probs=78.5
Q ss_pred CCcceeeeecCCCcEEeEEEEEEeCCeEEEEEcc-CcceeeeeecCccccCCCCC-------------------C-----
Q psy987 1 MDELEVEVCGENGAYYKVIVKMIKGDFHVVEYLG-CQSTFTEIVPPERMRQKNTN-------------------P----- 55 (114)
Q Consensus 1 m~~l~VEv~g~ngawwkA~Vk~vkgd~~vV~f~~-w~~~~~eiv~~~RLrp~n~n-------------------~----- 55 (114)
.++|.|||||+||+||+|+|+++++|.++|+|+| ||++.+.+|+..||+|++.. +
T Consensus 3 ~~~~~VEV~~~~G~~y~a~V~~v~~d~~~V~f~n~w~~~~~vp~~~vRlpP~~~~~~~f~~gd~VEV~~~~~d~ep~gWw 82 (128)
T 3h8z_A 3 FQGLPVEVRGSNGAFYKGFVKDVHEDSVTIFFENNWQSERQIPFGDVRLPPPADYNKEITEGDEVEVYSRANEQEPCGWW 82 (128)
T ss_dssp TTTCEEEEECTTSCEEEEEEEEECSSEEEEEETTCTTCCEEEEGGGEECCCCC----CCCTTCEEEEEECC---CCCEEE
T ss_pred ccccEEEEecCCCCEEEEEEEEEeCCcEEEEEccccCcceEechhhEEcCCCcccccCCCCCCEEEEEecCCCCCcCccE
Confidence 4799999999999999999999999999999999 99999999999999998621 1
Q ss_pred ----CCCCCceEEEEEc-cCccHHHH--HhhcCCCCCCCCCCCCce
Q psy987 56 ----PIDAKTFHKFDIE-VPLDQSDW--LISKNGKNTNPPIDAKTF 94 (114)
Q Consensus 56 ----pm~K~~F~~ie~~-vP~dl~Ei--~~r~r~~n~n~pi~~~~f 94 (114)
.|.||+||.++|+ +.++|+|| ++|||+.|+|+||+|+||
T Consensus 83 ~a~I~~~kg~f~~V~y~~~~~~~~EiV~~~rlR~~n~~~p~~~~~f 128 (128)
T 3h8z_A 83 LARVRMMKGDFYVIEYAACDATYNEIVTLERLRPVNPNPLATKGSF 128 (128)
T ss_dssp EEEEEEEETTEEEEEETTC----CEEECGGGEEECCCCCCC-----
T ss_pred EEEEEEeeCCEEEEEEcCCCCCcceEEehhheEeCCCCCCcccCCC
Confidence 2899999999999 79999999 999999999999999998
No 2
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*
Probab=99.78 E-value=3.2e-19 Score=129.24 Aligned_cols=59 Identities=42% Similarity=0.704 Sum_probs=46.1
Q ss_pred ceeeeecC-----CCcEEeEEEEEEeCCeEEEEEccCcceeeeeecCccccCCCCCCCCCCCce
Q psy987 4 LEVEVCGE-----NGAYYKVIVKMIKGDFHVVEYLGCQSTFTEIVPPERMRQKNTNPPIDAKTF 62 (114)
Q Consensus 4 l~VEv~g~-----ngawwkA~Vk~vkgd~~vV~f~~w~~~~~eiv~~~RLrp~n~n~pm~K~~F 62 (114)
-.|||.-. +||||+|+|+|+||++++|+|.+|+++|++||+.+||||+|+|+||+|++|
T Consensus 65 d~VEV~~~~~d~ep~gWw~a~I~~~kg~f~~V~y~~~~~~~~EiV~~~rlR~~n~~~p~~~~~f 128 (128)
T 3h8z_A 65 DEVEVYSRANEQEPCGWWLARVRMMKGDFYVIEYAACDATYNEIVTLERLRPVNPNPLATKGSF 128 (128)
T ss_dssp CEEEEEECC---CCCEEEEEEEEEEETTEEEEEETTC----CEEECGGGEEECCCCCCC-----
T ss_pred CEEEEEecCCCCCcCccEEEEEEEeeCCEEEEEEcCCCCCcceEEehhheEeCCCCCCcccCCC
Confidence 46787653 568999999999999999999999999999999999999999999999998
No 3
>1mhn_A SurviVal motor neuron protein; SMN, SMA, spinal muscular atrophy, RNA binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 PDB: 4a4e_A* 4a4g_A*
Probab=97.44 E-value=0.0004 Score=42.84 Aligned_cols=41 Identities=22% Similarity=0.237 Sum_probs=34.9
Q ss_pred CCCcEEeEEEEEEeC--CeEEEEEccCcceeeeeecCccccCCCC
Q psy987 11 ENGAYYKVIVKMIKG--DFHVVEYLGCQSTFTEIVPPERMRQKNT 53 (114)
Q Consensus 11 ~ngawwkA~Vk~vkg--d~~vV~f~~w~~~~~eiv~~~RLrp~n~ 53 (114)
+.|.||.|+|..+.+ +.+.|.|..+.. ++.|+..+|||.++
T Consensus 16 ~Dg~wYrA~I~~i~~~~~~~~V~f~DYGn--~e~v~~~~Lr~~~~ 58 (59)
T 1mhn_A 16 EDGCIYPATIASIDFKRETCVVVYTGYGN--REEQNLSDLLSPIC 58 (59)
T ss_dssp TTSCEEEEEEEEEETTTTEEEEEETTTTE--EEEEEGGGCBCTTC
T ss_pred CCCCEEEEEEEEEcCCCCEEEEEEEcCCC--EEEEcHHHeeCCCC
Confidence 368899999999985 899999998765 58888889998764
No 4
>4a4f_A SurviVal of motor neuron-related-splicing factor; RNA binding protein; HET: 2MR; NMR {Homo sapiens} PDB: 4a4h_A*
Probab=97.22 E-value=0.00076 Score=42.34 Aligned_cols=40 Identities=18% Similarity=0.408 Sum_probs=34.7
Q ss_pred CCCcEEeEEEEEEeC--CeEEEEEccCcceeeeeecCccccCCC
Q psy987 11 ENGAYYKVIVKMIKG--DFHVVEYLGCQSTFTEIVPPERMRQKN 52 (114)
Q Consensus 11 ~ngawwkA~Vk~vkg--d~~vV~f~~w~~~~~eiv~~~RLrp~n 52 (114)
+.|.||.|+|..+.+ +.+.|.|..+.+ ++.|+..+|||.+
T Consensus 21 ~Dg~wYrA~I~~v~~~~~~~~V~fvdYGn--~e~V~~~~Lrpl~ 62 (64)
T 4a4f_A 21 EDGQCYEAEIEEIDEENGTAAITFAGYGN--AEVTPLLNLKPVE 62 (64)
T ss_dssp TTSSEEEEEEEEEETTTTEEEEEETTTTE--EEEEEGGGEECCS
T ss_pred CCCCEEEEEEEEEcCCCCEEEEEEEecCC--EEEEeHHHcEeCC
Confidence 478899999999997 589999998765 5889999999875
No 5
>1g5v_A SurviVal motor neuron protein 1; mRNA processing, translation; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=97.13 E-value=0.001 Score=44.80 Aligned_cols=41 Identities=22% Similarity=0.237 Sum_probs=35.0
Q ss_pred CCCcEEeEEEEEEeC--CeEEEEEccCcceeeeeecCccccCCCC
Q psy987 11 ENGAYYKVIVKMIKG--DFHVVEYLGCQSTFTEIVPPERMRQKNT 53 (114)
Q Consensus 11 ~ngawwkA~Vk~vkg--d~~vV~f~~w~~~~~eiv~~~RLrp~n~ 53 (114)
+.|.||.|+|..+.+ +.+.|.|..+.. ++.|+..+|||.+.
T Consensus 23 ~Dg~wYrA~I~~i~~~~~~~~V~fiDYGN--~E~V~~~~Lrp~~~ 65 (88)
T 1g5v_A 23 EDGCIYPATIASIDFKRETCVVVYTGYGN--REEQNLSDLLSPIC 65 (88)
T ss_dssp TTCCEEEEEEEEEETTTTEEEEEETTTCC--EEEEEGGGCBCCC-
T ss_pred CCCCEEEEEEEEecCCCCEEEEEEecCCC--EEEEcHHHcccCCh
Confidence 478899999999986 899999998776 58889999999864
No 6
>2equ_A PHD finger protein 20-like 1; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.88 E-value=0.0018 Score=42.33 Aligned_cols=41 Identities=10% Similarity=0.182 Sum_probs=35.3
Q ss_pred cCCCcEEeEEEEEEeC-CeEEEEEccCcceeeeeecCccccCCCC
Q psy987 10 GENGAYYKVIVKMIKG-DFHVVEYLGCQSTFTEIVPPERMRQKNT 53 (114)
Q Consensus 10 g~ngawwkA~Vk~vkg-d~~vV~f~~w~~~~~eiv~~~RLrp~n~ 53 (114)
=+.|.||.|+|..+.+ +.++|.|..+ ..+.+...+|||.+.
T Consensus 20 wsDg~~Y~A~I~~v~~~~~~~V~f~Dy---n~e~v~~~~lrplp~ 61 (74)
T 2equ_A 20 WTDCRYYPAKIEAINKEGTFTVQFYDG---VIRCLKRMHIKAMPE 61 (74)
T ss_dssp CSSSSEEEEEEEEESTTSSEEEEETTS---CEEEECGGGEECCCG
T ss_pred CCCCCEEEEEEEEECCCCEEEEEEecC---CeEEecHHHCeeCCh
Confidence 3478899999999987 6899999977 478899999999975
No 7
>2d9t_A Tudor domain-containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.34.9.1
Probab=96.82 E-value=0.0037 Score=40.68 Aligned_cols=42 Identities=19% Similarity=0.299 Sum_probs=35.1
Q ss_pred CCCcEEeEEEEEEeC--CeEEEEEccCcceeeeeecCccccCCCCC
Q psy987 11 ENGAYYKVIVKMIKG--DFHVVEYLGCQSTFTEIVPPERMRQKNTN 54 (114)
Q Consensus 11 ~ngawwkA~Vk~vkg--d~~vV~f~~w~~~~~eiv~~~RLrp~n~n 54 (114)
+.|.||.|+|..+.+ +.+.|.|..+.. ++.|+...|||.+..
T Consensus 22 ~Dg~wYRA~I~~i~~~~~~~~V~fiDYGN--~e~V~~~~Lr~l~~~ 65 (78)
T 2d9t_A 22 EDNKFYRAEVEALHSSGMTAVVKFTDYGN--YEEVLLSNIKPVQTE 65 (78)
T ss_dssp TTCCEEEEEEEEECSSSSEEEEEETTTTE--EEEEEGGGEEECCCC
T ss_pred CCCCEEEEEEEEEeCCCCEEEEEEEcCCC--eEEEcHHHeEeCCHH
Confidence 368899999999986 789999998665 578888899988753
No 8
>3s6w_A Tudor domain-containing protein 3; methylated arginine recognize, ISO-propanol, transcri; 1.78A {Homo sapiens} PDB: 3pmt_A*
Probab=96.75 E-value=0.0026 Score=38.32 Aligned_cols=40 Identities=20% Similarity=0.329 Sum_probs=32.2
Q ss_pred cCCCcEEeEEEEEEe--CCeEEEEEccCcceeeeeecCccccCC
Q psy987 10 GENGAYYKVIVKMIK--GDFHVVEYLGCQSTFTEIVPPERMRQK 51 (114)
Q Consensus 10 g~ngawwkA~Vk~vk--gd~~vV~f~~w~~~~~eiv~~~RLrp~ 51 (114)
.+.|.||.|+|..+. ++.+.|.|..... ++.++...|||.
T Consensus 13 s~Dg~wYrA~I~~i~~~~~~~~V~fvDYGn--~e~v~~~~lrpi 54 (54)
T 3s6w_A 13 WEDNKFYRAEVEALHSSGMTAVVKFIDYGN--YEEVLLSNIKPI 54 (54)
T ss_dssp TTTTEEEEEEEEEC--CCSEEEEEETTTCC--EEEEEGGGEECC
T ss_pred CCCCCEEEEEEEEEeCCCCEEEEEEEccCC--eEEEeHHHEEEC
Confidence 357889999999996 4689999998665 588888999873
No 9
>2eqm_A PHD finger protein 20-like 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2jtf_A
Probab=96.67 E-value=0.007 Score=40.54 Aligned_cols=49 Identities=14% Similarity=0.188 Sum_probs=42.3
Q ss_pred ceeeeecCCCcEEeEEEEEEe--CCeEEEEEccCcceeeeeecCc--cccCCC
Q psy987 4 LEVEVCGENGAYYKVIVKMIK--GDFHVVEYLGCQSTFTEIVPPE--RMRQKN 52 (114)
Q Consensus 4 l~VEv~g~ngawwkA~Vk~vk--gd~~vV~f~~w~~~~~eiv~~~--RLrp~n 52 (114)
+-||+.-..+-||.|+|+.+. |..+.|.|.+|+..|-+-+..+ ||+|..
T Consensus 24 mkLEA~D~~~~~~~a~i~~v~~~~~~v~VHfdGW~~~yDeWv~~dS~~I~P~g 76 (88)
T 2eqm_A 24 ARLEALDYLQKWYPSRIEKIDYEEGKMLVHFERWSHRYDEWIYWDSNRLRPLE 76 (88)
T ss_dssp CEEEEECTTSCEEEEEEEEEETTTTEEEEEESSSTTTEEEEEETTSCCEECCC
T ss_pred CEEEEEcCCCCeeEEEEEEEeccCCEEEEEECCCCCcccEEeeCCCCcEeccc
Confidence 467887777789999998766 8899999999999999998866 999985
No 10
>3sd4_A PHD finger protein 20; tudor domain, transcription; 1.93A {Homo sapiens} PDB: 3q1j_A
Probab=96.53 E-value=0.0078 Score=38.19 Aligned_cols=49 Identities=10% Similarity=0.141 Sum_probs=39.0
Q ss_pred cceeeeecCCCcEEeEEEEEE--eCCeEEEEEccCcceeeeeecCc--cccCC
Q psy987 3 ELEVEVCGENGAYYKVIVKMI--KGDFHVVEYLGCQSTFTEIVPPE--RMRQK 51 (114)
Q Consensus 3 ~l~VEv~g~ngawwkA~Vk~v--kgd~~vV~f~~w~~~~~eiv~~~--RLrp~ 51 (114)
.+-+|+..-.+-||.|+|..| .|..+.|.|.+|+..|.+-+..+ +|+|.
T Consensus 16 GmkLEa~d~~~p~~~AtV~~v~~~~~~~~VhfdGw~~~~D~W~~~dS~~i~Pv 68 (69)
T 3sd4_A 16 GAQLEARDRLKNWYPAHIEDIDYEEGKVLIHFKRWNHRYDEWFCWDSPYLRPL 68 (69)
T ss_dssp TCEEEEECTTSCEEEEEEEEEETTTTEEEEEETTSCGGGCEEEETTCTTEECC
T ss_pred CCEEEEEECCCCccccEEEEEeccCCEEEEEeCCCCCCCCEEEcCCCCCeeEC
Confidence 356888777777899999998 89999999999998887766543 45553
No 11
>3pnw_C Tudor domain-containing protein 3; FAB, structural genomics consortium, antibody, SGC, protein immune system complex; 2.05A {Homo sapiens}
Probab=96.52 E-value=0.0051 Score=40.09 Aligned_cols=41 Identities=20% Similarity=0.329 Sum_probs=33.4
Q ss_pred CCCcEEeEEEEEEeC--CeEEEEEccCcceeeeeecCccccCCCC
Q psy987 11 ENGAYYKVIVKMIKG--DFHVVEYLGCQSTFTEIVPPERMRQKNT 53 (114)
Q Consensus 11 ~ngawwkA~Vk~vkg--d~~vV~f~~w~~~~~eiv~~~RLrp~n~ 53 (114)
+.|.||.|+|..+.+ +.+.|.|..... ++.|+..+|||.+.
T Consensus 30 ~Dg~wYRA~I~~i~~~~~~~~V~fvDYGN--~e~V~~~~Lr~l~~ 72 (77)
T 3pnw_C 30 EDNKFYRAEVEALHSSGMTAVVKFIDYGN--YEEVLLSNIKPIQT 72 (77)
T ss_dssp TTTEEEEEEEEEECTTSSEEEEEETTTCC--EEEEEGGGEECC--
T ss_pred CCCCEEEEEEEEEeCCCCEEEEEEEcCCC--eEEEeHHHeEECCh
Confidence 478899999999974 589999998665 68899999999875
No 12
>2f5k_A MORF-related gene 15 isoform 1; beta barrel, gene regulation; 2.20A {Homo sapiens} SCOP: b.34.13.3 PDB: 2efi_A
Probab=95.89 E-value=0.011 Score=40.96 Aligned_cols=41 Identities=17% Similarity=0.233 Sum_probs=36.9
Q ss_pred CCcEEeEEEEEEe----CCeEEEEEccCcceeeeeecCccccCCC
Q psy987 12 NGAYYKVIVKMIK----GDFHVVEYLGCQSTFTEIVPPERMRQKN 52 (114)
Q Consensus 12 ngawwkA~Vk~vk----gd~~vV~f~~w~~~~~eiv~~~RLrp~n 52 (114)
.|-||.|+|..+. +..|.|-|.+|+..+-|-|+.+||...+
T Consensus 34 ~~~~YeAkIl~v~~~~~~~~Y~VHY~GwNkR~DEWV~~~Rl~k~t 78 (102)
T 2f5k_A 34 GPLLYEAKCVKVAIKDKQVKYFIHYSGWNKNWDEWVPESRVLKYV 78 (102)
T ss_dssp SSSEEEEEEEEEEEETTEEEEEEEETTSCGGGCEEEEGGGEEESS
T ss_pred CCEEEEEEEEEEEEcCCCcEEEEEeCCcCCCceeeccHhhcccCC
Confidence 5789999999988 3489999999999999999999999776
No 13
>3m9q_A Protein MALE-specific lethal-3; chromodomain, MSL3, methyllysine recognition, aromatic CAGE, complex, transcription upregulation; 1.29A {Drosophila melanogaster} SCOP: b.34.13.0
Probab=95.60 E-value=0.017 Score=39.98 Aligned_cols=41 Identities=10% Similarity=0.129 Sum_probs=36.5
Q ss_pred CCcEEeEEEEEEeC---------CeEEEEEccCcceeeeeecCccccCCC
Q psy987 12 NGAYYKVIVKMIKG---------DFHVVEYLGCQSTFTEIVPPERMRQKN 52 (114)
Q Consensus 12 ngawwkA~Vk~vkg---------d~~vV~f~~w~~~~~eiv~~~RLrp~n 52 (114)
.+.+|.|+|.++.. ..|.|-|.||...+-+-|+.+||...+
T Consensus 36 g~~lYeAKIl~v~~~~~~~~~~~~~Y~VHY~GWn~rwDEWV~edRilk~~ 85 (101)
T 3m9q_A 36 ARVLYTSKVLNVFERRNEHGLRFYEYKIHFQGWRPSYDRAVRATVLLKDT 85 (101)
T ss_dssp CCCEEEEEEEEEEEEECTTSCEEEEEEEEETTSCGGGCEEECGGGEEECC
T ss_pred CCcceEeEEEEEEecCCccccCceEEEEEeCCCCcCceeecCHHHcccCC
Confidence 46799999999875 379999999999999999999998775
No 14
>2lcc_A AT-rich interactive domain-containing protein 4A; chromobarrel domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=95.59 E-value=0.012 Score=38.53 Aligned_cols=41 Identities=22% Similarity=0.334 Sum_probs=36.0
Q ss_pred CCcEEeEEEEEEeCC----eEEEEEccCcceeeeeecCccccCCC
Q psy987 12 NGAYYKVIVKMIKGD----FHVVEYLGCQSTFTEIVPPERMRQKN 52 (114)
Q Consensus 12 ngawwkA~Vk~vkgd----~~vV~f~~w~~~~~eiv~~~RLrp~n 52 (114)
.|.||.|+|..+... .|.|-|.+|+..+-+=|+.+||...+
T Consensus 21 ~~~~y~AkIl~i~~~~~~~~Y~VHY~gwnkr~DEWV~~~ri~~~~ 65 (76)
T 2lcc_A 21 TQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPL 65 (76)
T ss_dssp EEEEEEEEEEEEEEETTEEEEEEEETTSCCSSCEEEEGGGEECSS
T ss_pred CCCEEEEEEEEEEccCCceEEEEEeCCcCCCceEecChhhccccc
Confidence 468999999888754 68999999999999999999998664
No 15
>3fdr_A Tudor and KH domain-containing protein; TDRD2, structural genomics, structural genomics consortium, SGC, alternative splicing, RNA-binding; 1.75A {Homo sapiens} SCOP: b.34.9.1
Probab=95.54 E-value=0.024 Score=37.13 Aligned_cols=41 Identities=15% Similarity=0.198 Sum_probs=34.4
Q ss_pred CCCcEEeEEEEEEeC-CeEEEEEccCcceeeeeecCccccCCCC
Q psy987 11 ENGAYYKVIVKMIKG-DFHVVEYLGCQSTFTEIVPPERMRQKNT 53 (114)
Q Consensus 11 ~ngawwkA~Vk~vkg-d~~vV~f~~w~~~~~eiv~~~RLrp~n~ 53 (114)
+.|.||.|+|..+.+ +.+.|.|-.+.. .+.|+...|||.+.
T Consensus 40 ~d~~wyRA~I~~~~~~~~~~V~fvDyGn--~e~v~~~~lr~l~~ 81 (94)
T 3fdr_A 40 TNGSWYRARVLGTLENGNLDLYFVDFGD--NGDCPLKDLRALRS 81 (94)
T ss_dssp TTTEEEEEEEEEECTTSCEEEEETTTCC--EEEECGGGCEECCG
T ss_pred CCCeEEEEEEEEECCCCeEEEEEEcCCC--eEEEEHHHhhhcCH
Confidence 478999999999987 489999998665 58888999998864
No 16
>2eqk_A Tudor domain-containing protein 4; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.73 E-value=0.049 Score=36.66 Aligned_cols=41 Identities=15% Similarity=0.111 Sum_probs=30.5
Q ss_pred CCcEEeEEEEEEeCCeEEEEEccCcceeeeeecCccccCCCC
Q psy987 12 NGAYYKVIVKMIKGDFHVVEYLGCQSTFTEIVPPERMRQKNT 53 (114)
Q Consensus 12 ngawwkA~Vk~vkgd~~vV~f~~w~~~~~eiv~~~RLrp~n~ 53 (114)
+++||.|+|..+.+|.. ++-.-.|--.++.|+..||||.++
T Consensus 35 ~n~WyRakV~~v~~~~~-veVl~~DyGn~~~V~~~~LR~L~~ 75 (85)
T 2eqk_A 35 KNQWRRGQIIRMVTDTL-VEVLLYDVGVELVVNVDCLRKLEE 75 (85)
T ss_dssp SCCEEEEEEEEECSSSE-EEEECTTTCCEEEEETTTEEECCH
T ss_pred CCeEEEEEEEEecCCCe-EEEEEEccCCEEEEEccccccCCH
Confidence 45899999999999765 443334444468888899999864
No 17
>3m9p_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3oa6_A* 3ob9_A*
Probab=94.60 E-value=0.043 Score=38.50 Aligned_cols=40 Identities=5% Similarity=0.144 Sum_probs=35.4
Q ss_pred CcEEeEEEEEEeC---------CeEEEEEccCcceeeeeecCccccCCC
Q psy987 13 GAYYKVIVKMIKG---------DFHVVEYLGCQSTFTEIVPPERMRQKN 52 (114)
Q Consensus 13 gawwkA~Vk~vkg---------d~~vV~f~~w~~~~~eiv~~~RLrp~n 52 (114)
..||.|+|..+.. ..|.|-|.+|...+-+-|+.+||..-+
T Consensus 37 ~~lYeAKIl~v~~~~~~~g~~~~~Y~VHY~GWn~~wDEWV~e~rllk~~ 85 (110)
T 3m9p_A 37 RVLYDAKIVDVIVGKDEKGRKIPEYLIHFNGWNRSWDRWAAEDHVLRDT 85 (110)
T ss_dssp CCEEEEEEEEEEEEECTTCCEEEEEEEEETTSCGGGCEEEEGGGEEECC
T ss_pred CCceeeEEEEEEeccCcccccceEEEEEECCCCcchhhccCHhhhhcCC
Confidence 5899999998864 369999999999999999999998775
No 18
>2diq_A Tudor and KH domain-containing protein; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=94.53 E-value=0.031 Score=37.64 Aligned_cols=40 Identities=15% Similarity=0.190 Sum_probs=33.7
Q ss_pred CCCcEEeEEEEEEeC-CeEEEEEccCcceeeeeecCccccCCC
Q psy987 11 ENGAYYKVIVKMIKG-DFHVVEYLGCQSTFTEIVPPERMRQKN 52 (114)
Q Consensus 11 ~ngawwkA~Vk~vkg-d~~vV~f~~w~~~~~eiv~~~RLrp~n 52 (114)
+.|.||.|+|..+.+ +.+.|.|..+.. .+.|+...||+.+
T Consensus 45 ~d~~wyRA~V~~~~~~~~~~V~fvDyGn--~e~v~~~~Lr~l~ 85 (110)
T 2diq_A 45 TNGSWYRARVLGTLENGNLDLYFVDFGD--NGDCPLKDLRALR 85 (110)
T ss_dssp TTCSCEEEEECCCCSSSCEEEEETTTCC--EEEECGGGCEECC
T ss_pred CCCeEEEEEEEEECCCCeEEEEEEeCCC--eEEEehHHhhcCc
Confidence 368899999999987 789999998665 5788888898876
No 19
>3p8d_A Medulloblastoma antigen MU-MB-50.72; tudor domain, lysine-methylated P53 binding, histone binding binding; 2.00A {Homo sapiens}
Probab=94.51 E-value=0.086 Score=33.90 Aligned_cols=41 Identities=12% Similarity=0.242 Sum_probs=31.8
Q ss_pred CCCcEEeEEEEEEeCC-eEEEEEccCcceeeeeecCccccCCCCC
Q psy987 11 ENGAYYKVIVKMIKGD-FHVVEYLGCQSTFTEIVPPERMRQKNTN 54 (114)
Q Consensus 11 ~ngawwkA~Vk~vkgd-~~vV~f~~w~~~~~eiv~~~RLrp~n~n 54 (114)
..|.||.|+|..+.|+ .|+|.|.. . .++.+....|+|.+.+
T Consensus 18 ~D~~yYpA~I~si~~~~~Y~V~F~d-G--~~etvk~~~ikp~~~~ 59 (67)
T 3p8d_A 18 SDCRFYPAKVTAVNKDGTYTVKFYD-G--VVQTVKHIHVKAFSKD 59 (67)
T ss_dssp TTSCEEEEEEEEECTTSEEEEEETT-S--CEEEEEGGGEEECC--
T ss_pred CCCCEeeEEEEEECCCCeEEEEEeC-C--ceEEEeHHHcccCCcc
Confidence 5788999999999996 89999986 3 3577777777777643
No 20
>2ldm_A Uncharacterized protein; PHF20, tudor domain, epigenetics, methylated P53, transcript factor, transcription-protein binding complex; HET: M2L; NMR {Homo sapiens}
Probab=93.39 E-value=0.0074 Score=40.31 Aligned_cols=39 Identities=10% Similarity=0.215 Sum_probs=33.1
Q ss_pred CCcEEeEEEEEEeC-CeEEEEEccCcceeeeeecCccccCCCC
Q psy987 12 NGAYYKVIVKMIKG-DFHVVEYLGCQSTFTEIVPPERMRQKNT 53 (114)
Q Consensus 12 ngawwkA~Vk~vkg-d~~vV~f~~w~~~~~eiv~~~RLrp~n~ 53 (114)
.|.||.|+|..+.+ +.|.|.|.. -..+.++..+|+|.+.
T Consensus 19 Dg~wY~A~I~~v~~~~~y~V~F~D---Gn~E~V~~s~LrPl~~ 58 (81)
T 2ldm_A 19 DSRFYPAKVTAVNKDGTYTVKFYD---GVVQTVKHIHVKAFSK 58 (81)
Confidence 67899999999965 589999986 3578999999999974
No 21
>2eko_A Histone acetyltransferase htatip; chromo domain, histone tail, chromatin organization modifier, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.21 E-value=0.048 Score=36.58 Aligned_cols=41 Identities=20% Similarity=0.311 Sum_probs=36.2
Q ss_pred CCCcEEeEEEEEEeC----CeEEEEEccCcceeeeeecCccccCC
Q psy987 11 ENGAYYKVIVKMIKG----DFHVVEYLGCQSTFTEIVPPERMRQK 51 (114)
Q Consensus 11 ~ngawwkA~Vk~vkg----d~~vV~f~~w~~~~~eiv~~~RLrp~ 51 (114)
+.|.||.|+|..++. ..|.|-|.+|+..+-+=|+.+||+-.
T Consensus 25 ~~~~~y~AkIl~i~~~~~~~~YyVHY~g~NkRlDEWV~~~rl~~~ 69 (87)
T 2eko_A 25 NEDEWPLAEILSVKDISGRKLFYVHYIDFNRRLDEWVTHERLDLK 69 (87)
T ss_dssp CCEECCEEEEEEECCSSSCCCEEEEECSSCSCCCEEECTTTBCGG
T ss_pred CCCeEEEEEEEEEEEcCCCcEEEEEeCCCCcccccccCHhHcccc
Confidence 578899999999886 37999999999999999999999644
No 22
>2wac_A CG7008-PA; unknown function, tudor, beta-barrel, nuclease domain, tudor P100, SND1, methylated arginine, SDMA, splicing; 2.10A {Drosophila melanogaster}
Probab=94.09 E-value=0.089 Score=38.17 Aligned_cols=55 Identities=15% Similarity=0.330 Sum_probs=39.2
Q ss_pred CCcEEeEEEEEEeCCeEEEEEccCcceeeeeecCccccCCCCCCCCCCCceEEEEEc
Q psy987 12 NGAYYKVIVKMIKGDFHVVEYLGCQSTFTEIVPPERMRQKNTNPPIDAKTFHKFDIE 68 (114)
Q Consensus 12 ngawwkA~Vk~vkgd~~vV~f~~w~~~~~eiv~~~RLrp~n~n~pm~K~~F~~ie~~ 68 (114)
.|.||.|+|..+.++.+.|.|..+.. ++.++..+|||.+..-......-.+|.+.
T Consensus 65 d~~wyRa~V~~v~~~~~~V~~vDyG~--~~~v~~~~l~~l~~~~~~~p~~a~~~~La 119 (218)
T 2wac_A 65 DNQWYRAKVERVQGSNATVLYIDYGN--KETLPTNRLAALPPAFSSEKPYATEYALA 119 (218)
T ss_dssp TCCEEEEEEEEEETTEEEEEETTTCC--EEEEEGGGEEECCGGGSSSCCSEEEEEET
T ss_pred CCeEEEEEEEEecCCeEEEEEEecCC--eEEEchHHcccCChhhccCCcceeEEEEC
Confidence 68899999999999999999998554 46677788888864211122333455555
No 23
>3qii_A PHD finger protein 20; tudor domain, structural genomics, structural GE consortium, SGC, transcription regulator; 2.30A {Homo sapiens}
Probab=93.65 E-value=0.15 Score=34.29 Aligned_cols=44 Identities=14% Similarity=0.283 Sum_probs=32.7
Q ss_pred eecCCCcEEeEEEEEEeCC-eEEEEEccCcceeeeeecCccccCCCCC
Q psy987 8 VCGENGAYYKVIVKMIKGD-FHVVEYLGCQSTFTEIVPPERMRQKNTN 54 (114)
Q Consensus 8 v~g~ngawwkA~Vk~vkgd-~~vV~f~~w~~~~~eiv~~~RLrp~n~n 54 (114)
-|=..|.||.|+|..+.++ .|+|.|.. . ..+.+...-|+|.+.+
T Consensus 30 ArW~D~~yYPAkI~sV~~~~~YtV~F~D-G--~~etvk~~~IKp~~~~ 74 (85)
T 3qii_A 30 ACWSDCRFYPAKVTAVNKDGTYTVKFYD-G--VVQTVKHIHVKAFSKD 74 (85)
T ss_dssp EECTTSCEEEEEEEEECTTSEEEEEETT-S--CEEEEEGGGEEECC--
T ss_pred EEeCCCCEeeEEEEEECCCCeEEEEEeC-C--CeEEecHHHcccCChh
Confidence 3335788999999999995 89999986 3 3567777777777643
No 24
>2k3y_A Chromatin modification-related protein EAF3; dimethylated histone H3K36, EAF3-H3K36ME2 fusion, chromo barrel domain, histone deacetylase; HET: M2L; NMR {Saccharomyces cerevisiae}
Probab=92.72 E-value=0.15 Score=36.93 Aligned_cols=26 Identities=31% Similarity=0.487 Sum_probs=24.8
Q ss_pred eEEEEEccCcceeeeeecCccccCCC
Q psy987 27 FHVVEYLGCQSTFTEIVPPERMRQKN 52 (114)
Q Consensus 27 ~~vV~f~~w~~~~~eiv~~~RLrp~n 52 (114)
.|.|-|.+|..+.-+=|+.+||+.-|
T Consensus 78 ~Y~VHY~GWn~rwDEWV~~dRil~~~ 103 (136)
T 2k3y_A 78 SFFIHYQGWKSSWDEWVGYDRIRAYN 103 (136)
T ss_dssp EEEECCTTSCGGGCEEEETTTEEESC
T ss_pred eEEEEeCCcCCcceeeecHhhhhhCC
Confidence 79999999999999999999999887
No 25
>2lrq_A Protein MRG15, NUA4 complex subunit EAF3 homolog; epigenetics, LID complex, transcription; NMR {Drosophila melanogaster}
Probab=91.80 E-value=0.022 Score=37.99 Aligned_cols=42 Identities=24% Similarity=0.282 Sum_probs=36.7
Q ss_pred CCcEEeEEEEEEeC----CeEEEEEccCcceeeeeecCccccCCCC
Q psy987 12 NGAYYKVIVKMIKG----DFHVVEYLGCQSTFTEIVPPERMRQKNT 53 (114)
Q Consensus 12 ngawwkA~Vk~vkg----d~~vV~f~~w~~~~~eiv~~~RLrp~n~ 53 (114)
.+.||.|+|..++. ..|.|-|.+|+..+-+-|+.+||...+.
T Consensus 24 ~~~~y~AkIl~i~~~~~~~~YyVHY~GwNkR~DEWV~~~Rl~k~t~ 69 (85)
T 2lrq_A 24 GPLIYEAKVLKTKPDATPVEYYIHYAGWSKNWDEWVPENRVLKYND 69 (85)
Confidence 45799999988873 4799999999999999999999998763
No 26
>1wgs_A MYST histone acetyltransferase 1; tudor domain, MYST family, struct genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.34.13.3
Probab=92.49 E-value=0.22 Score=35.46 Aligned_cols=40 Identities=18% Similarity=0.250 Sum_probs=34.8
Q ss_pred CCcEEeEEEEEEeC------CeEEEEEccCcceeeeeecCccccCC
Q psy987 12 NGAYYKVIVKMIKG------DFHVVEYLGCQSTFTEIVPPERMRQK 51 (114)
Q Consensus 12 ngawwkA~Vk~vkg------d~~vV~f~~w~~~~~eiv~~~RLrp~ 51 (114)
.|.||.|+|..+.. -.|.|-|.+|+..+-+=|+.+||.-.
T Consensus 25 d~~~y~AkIl~i~~~~~~~~~~YyVHY~gwNkR~DEWV~~~ri~~~ 70 (133)
T 1wgs_A 25 DSTWHSAEVIQSRVNDQEGREEFYVHYVGFNRRLDEWVDKNRLALT 70 (133)
T ss_dssp TTEEEEEEEEEEEEETTTTEEEEEEECTTTCSSCCEEECTTTSCCT
T ss_pred CCCEEEEEEEEEEeccCCCceEEEEeccCcCCCceeecChhhcccc
Confidence 57899999988773 26999999999999999999999643
No 27
>2ro0_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=91.86 E-value=0.25 Score=33.32 Aligned_cols=40 Identities=15% Similarity=0.193 Sum_probs=35.3
Q ss_pred CCcEEeEEEEEEeC----CeEEEEEccCcceeeeeecCccccCC
Q psy987 12 NGAYYKVIVKMIKG----DFHVVEYLGCQSTFTEIVPPERMRQK 51 (114)
Q Consensus 12 ngawwkA~Vk~vkg----d~~vV~f~~w~~~~~eiv~~~RLrp~ 51 (114)
.|.||.|+|..++. -.|.|-|.+|+..+-+=|+.+||.-.
T Consensus 35 ~~~~y~AkIl~ir~~~~~~~YyVHY~g~NkRlDEWV~~~rl~l~ 78 (92)
T 2ro0_A 35 NDEERLAEILSINTRKAPPKFYVHYVNYNKRLDEWITTDRINLD 78 (92)
T ss_dssp TTEEEEEEEEEEECSSSSCEEEEEETTSCTTSCEEEEGGGEETT
T ss_pred CCEEEEEEEEEEEEcCCCcEEEEEeCCcCcccccccCHhHcccc
Confidence 68899999998884 47899999999999999999999644
No 28
>1wjq_A KIAA1798 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3
Probab=91.52 E-value=0.3 Score=33.82 Aligned_cols=48 Identities=10% Similarity=0.056 Sum_probs=36.1
Q ss_pred eeeee--cCCCcEEeEEEEEEeCCeEEEEEccCcceeeeeecC--ccccCCC
Q psy987 5 EVEVC--GENGAYYKVIVKMIKGDFHVVEYLGCQSTFTEIVPP--ERMRQKN 52 (114)
Q Consensus 5 ~VEv~--g~ngawwkA~Vk~vkgd~~vV~f~~w~~~~~eiv~~--~RLrp~n 52 (114)
-+|+. -.+..+|.|.|.+|.|..+.|.|++|+..|.+.+.. -.|.|..
T Consensus 19 KLEAvD~~~p~~icvATV~~v~g~rl~v~fDGw~~~~D~W~~~dSpdIhPVG 70 (107)
T 1wjq_A 19 KLEVVDKRNPMFIRVATVADTDDHRVKVHFDGWNNCYDYWIDADSPDIHPVG 70 (107)
T ss_dssp EEEEECTTCTTCEEEEEEEEECSSCEEEECSSSCGGGCEEECTTCSSCEETT
T ss_pred EEEEEcCCCCCcEEeEEEEEecCCEEEEEeCCCCCcCCEEEECCCCCcccCc
Confidence 34443 346789999999999999999999999887766443 3455553
No 29
>2hqx_A P100 CO-activator tudor domain; human P100 tudor domain, proteolytic fragment, PSI, structural genomics; 1.42A {Homo sapiens} SCOP: b.34.9.1 PDB: 2hqe_A 3omc_A* 3omg_A* 2o4x_A 2e6n_A 2o4x_B
Probab=91.24 E-value=0.43 Score=35.61 Aligned_cols=39 Identities=21% Similarity=0.431 Sum_probs=32.1
Q ss_pred CCcEEeEEEEEEe-CCeEEEEEccCcceeeeeecCccccCCC
Q psy987 12 NGAYYKVIVKMIK-GDFHVVEYLGCQSTFTEIVPPERMRQKN 52 (114)
Q Consensus 12 ngawwkA~Vk~vk-gd~~vV~f~~w~~~~~eiv~~~RLrp~n 52 (114)
.|.||.|+|..+. ++.+.|.|-.+.. .+.++..+||+.+
T Consensus 78 d~~wyRa~V~~~~~~~~~~V~~vDyGn--~~~v~~~~lr~l~ 117 (246)
T 2hqx_A 78 DGEWYRARVEKVESPAKIHVFYIDYGN--REVLPSTRLGTLS 117 (246)
T ss_dssp TSCEEEEEEEEEEETTEEEEEETTTCC--EEEECGGGEECCC
T ss_pred CCCEEEEEEEEEcCCCeEEEEEEeCCC--eEEEeHHHhhcCC
Confidence 6889999999997 6899999998554 4677888888776
No 30
>3oa6_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3ob9_A*
Probab=91.07 E-value=0.23 Score=34.73 Aligned_cols=40 Identities=5% Similarity=0.200 Sum_probs=34.2
Q ss_pred CcEEeEEEEEEe---CC------eEEEEEccCcceeeeeecCccccCCC
Q psy987 13 GAYYKVIVKMIK---GD------FHVVEYLGCQSTFTEIVPPERMRQKN 52 (114)
Q Consensus 13 gawwkA~Vk~vk---gd------~~vV~f~~w~~~~~eiv~~~RLrp~n 52 (114)
.-+|-|+|.++. ++ .|.|-|.||...+-+=|+.+||..-|
T Consensus 37 ~llYeAKIl~v~~~~~~~~~~~~~Y~VHY~GWn~~WDEWV~~drllk~n 85 (110)
T 3oa6_A 37 RVLYDAKIVDVIVGKDEKGRKIPEYLIHFNGWNRSWDRWAAEDHVLRDT 85 (110)
T ss_dssp CCEEEEEEEEEEEEECTTCCEEEEEEEEETTSCGGGCEEEEGGGEEECC
T ss_pred cccEEEEEEEEEeccCCcCCcccEEEEEECCcCcchhhccChhhhhcCC
Confidence 358999998873 22 49999999999999999999999776
No 31
>2bud_A Males-absent on the first protein; transferase, MOF, HAT, acetyl-transfer, dosage compensation complex, DCC, royal family; NMR {Drosophila melanogaster} SCOP: b.34.13.3
Probab=90.51 E-value=0.49 Score=32.12 Aligned_cols=45 Identities=18% Similarity=0.208 Sum_probs=38.2
Q ss_pred eecCCCcEEeEEEEEEeCC-------eEEEEEccCcceeeeeecCccccCCC
Q psy987 8 VCGENGAYYKVIVKMIKGD-------FHVVEYLGCQSTFTEIVPPERMRQKN 52 (114)
Q Consensus 8 v~g~ngawwkA~Vk~vkgd-------~~vV~f~~w~~~~~eiv~~~RLrp~n 52 (114)
++-..|.||.|+|..++.. .|.|-|.+|+...-+=|+.+||...+
T Consensus 23 c~~~dg~~yeAeIl~ir~~~~~~~~~~YYVHY~g~NkRlDEWV~~~RL~~~~ 74 (92)
T 2bud_A 23 IRREDGTVHRGQVLQSRTTENAAAPDEYYVHYVGLNRRLDGWVGRHRISDNA 74 (92)
T ss_dssp EECTTSCEEEEEEEEEECTTTCSSCCEEEEECSSSCTTTCEEEETTTEESCH
T ss_pred EEeCCCCEEEEEEEEEeeccCCCCCcEEEEEeCCcccccccccCHHHhchhc
Confidence 4444789999999887742 69999999999999999999998765
No 32
>2rnz_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=90.17 E-value=0.53 Score=31.96 Aligned_cols=40 Identities=15% Similarity=0.193 Sum_probs=35.3
Q ss_pred CCcEEeEEEEEEeC----CeEEEEEccCcceeeeeecCccccCC
Q psy987 12 NGAYYKVIVKMIKG----DFHVVEYLGCQSTFTEIVPPERMRQK 51 (114)
Q Consensus 12 ngawwkA~Vk~vkg----d~~vV~f~~w~~~~~eiv~~~RLrp~ 51 (114)
.|.||.|+|..++. -.|.|-|.+|+..+-|=|+.+||.-.
T Consensus 37 ~~~~yeAeIl~ir~~~g~~~YYVHY~g~NkRlDEWV~~~RI~l~ 80 (94)
T 2rnz_A 37 NDEERLAEILSINTRKAPPKFYVHYVNYNKRLDEWITTDRINLD 80 (94)
T ss_dssp SSCEEEEEEEEEECSSSSCEEEEECTTSCSTTCEEEETTTBCSS
T ss_pred CCEEEEEEEEEEEEcCCCcEEEEEeCCcCcccccccCHHHcccc
Confidence 67899999998885 47899999999999999999999644
No 33
>4b9w_A TDRD1, tudor domain-containing protein 1; replication; HET: 2MR; 2.10A {Mus musculus}
Probab=89.45 E-value=0.54 Score=34.35 Aligned_cols=41 Identities=20% Similarity=0.338 Sum_probs=32.9
Q ss_pred CCCcEEeEEEEEEeC-CeEEEEEccCcceeeeeecCccccCCCC
Q psy987 11 ENGAYYKVIVKMIKG-DFHVVEYLGCQSTFTEIVPPERMRQKNT 53 (114)
Q Consensus 11 ~ngawwkA~Vk~vkg-d~~vV~f~~w~~~~~eiv~~~RLrp~n~ 53 (114)
+.|.||.|+|..+.+ +.+.|.|-.+.. ++.++..+||+.+.
T Consensus 78 ~d~~wyRa~V~~~~~~~~~~V~~vDyG~--~~~v~~~~l~~l~~ 119 (201)
T 4b9w_A 78 GDGNWYRALVKEILPSGNVKVHFVDYGN--VEEVTTDQLQAILP 119 (201)
T ss_dssp TTTEEEEEEEEEECTTSCEEEEETTTCC--EEEECGGGEEECCG
T ss_pred CCCeEEEEEEEEECCCCeEEEEEEccCC--EEEEEHHHhccChH
Confidence 578899999999864 478999987554 57788888998864
No 34
>3ntk_A Maternal protein tudor; tudor domain, OB-fold, GERM cell formation, transcription; 1.80A {Drosophila melanogaster} PDB: 3nth_A* 3nti_A*
Probab=88.78 E-value=0.71 Score=32.99 Aligned_cols=38 Identities=16% Similarity=0.360 Sum_probs=29.7
Q ss_pred CCCcEEeEEEEEEeCC-eEEEEEccCcceeeeeecCccccCCC
Q psy987 11 ENGAYYKVIVKMIKGD-FHVVEYLGCQSTFTEIVPPERMRQKN 52 (114)
Q Consensus 11 ~ngawwkA~Vk~vkgd-~~vV~f~~w~~~~~eiv~~~RLrp~n 52 (114)
+.|.||.|+|..+.++ .+.|.|-.+..+-. + .+||+.+
T Consensus 60 ~d~~wyRa~I~~~~~~~~~~V~fvDyGn~~~--v--~~lr~l~ 98 (169)
T 3ntk_A 60 EDEVFYRAQIRKVLDDGKCEVHFIDFGNNAV--T--QQFRQLP 98 (169)
T ss_dssp TTTEEEEEEEEEECSTTCEEEEETTTTEEEE--E--SCEECCC
T ss_pred CCCcEEEEEEEEECCCCEEEEEEEecCCeEE--h--hhhhccC
Confidence 4688999999999986 49999998665422 4 5788876
No 35
>4b9x_A TDRD1, tudor domain-containing protein 1; replication; 2.80A {Mus musculus}
Probab=88.24 E-value=0.75 Score=34.24 Aligned_cols=42 Identities=19% Similarity=0.333 Sum_probs=32.8
Q ss_pred cCCCcEEeEEEEEEeC-CeEEEEEccCcceeeeeecCccccCCCC
Q psy987 10 GENGAYYKVIVKMIKG-DFHVVEYLGCQSTFTEIVPPERMRQKNT 53 (114)
Q Consensus 10 g~ngawwkA~Vk~vkg-d~~vV~f~~w~~~~~eiv~~~RLrp~n~ 53 (114)
.+.|.||.|+|..+.+ +.+.|.|-.+.. ++.|+..+||+.+.
T Consensus 77 ~~d~~WyRa~V~~~~~~~~~~V~~vDyGn--~~~v~~~~l~~l~~ 119 (226)
T 4b9x_A 77 SGDGNWYRALVKEILPSGNVKVHFVDYGN--VEEVTTDQLQAILP 119 (226)
T ss_dssp TTTTEEEEEEEEEECSSSEEEEECTTTCC--EEEEEGGGEECCCG
T ss_pred CCCCeEEEEEEEEECCCCeEEEEEEecCC--EEEEEHHHhccChH
Confidence 3578899999999864 478899987554 46788888888763
No 36
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=87.63 E-value=1.1 Score=29.00 Aligned_cols=41 Identities=15% Similarity=0.319 Sum_probs=31.0
Q ss_pred eeeecCCCcEEeEEEEEEeCCeEEEEEccCcceeeeeecCcccc
Q psy987 6 VEVCGENGAYYKVIVKMIKGDFHVVEYLGCQSTFTEIVPPERMR 49 (114)
Q Consensus 6 VEv~g~ngawwkA~Vk~vkgd~~vV~f~~w~~~~~eiv~~~RLr 49 (114)
|=+|-+.|.||+|.|.+...+.++|.|+ |.+ +.-+....|+
T Consensus 22 VL~rw~DG~fYLGtIVd~~~~~ClV~Fe--D~S-~~Wv~~kdi~ 62 (69)
T 2xk0_A 22 VFIKCNDGRFYLGTIIDQTSDQYLIRFD--DQS-EQWCEPDKLR 62 (69)
T ss_dssp EEEECTTSCEEEEEEEEECSSCEEEEET--TCC-EEEECTTTEE
T ss_pred EEEEecCCCEEEEEEEecCCceEEEEec--CCc-ceeeeHHHHH
Confidence 3367789999999999999999999998 322 3445555554
No 37
>2r58_A Polycomb protein SCM; MBT repeat, sex COMB on midleg, DI-methyl lysine, regulator, developmental protein, metal-binding, nucleus; HET: MLY; 2.00A {Drosophila melanogaster} PDB: 2r57_A* 2r5a_A* 2r5m_A*
Probab=87.45 E-value=0.95 Score=35.54 Aligned_cols=49 Identities=16% Similarity=0.110 Sum_probs=38.0
Q ss_pred ceeeee--cCCCcEEeEEEEEEeCCeEEEEEccCcceeeeeecC--ccccCCC
Q psy987 4 LEVEVC--GENGAYYKVIVKMIKGDFHVVEYLGCQSTFTEIVPP--ERMRQKN 52 (114)
Q Consensus 4 l~VEv~--g~ngawwkA~Vk~vkgd~~vV~f~~w~~~~~eiv~~--~RLrp~n 52 (114)
+-+|+. -+++.+|.|.|.++.|+.+.|.|++|+..|-+.+.. -+|.|..
T Consensus 148 MKLEavD~~np~~icvATV~~v~g~rl~v~fDGw~~~~D~W~~~~Sp~I~PvG 200 (265)
T 2r58_A 148 QKLEAVDKKNPQLICCATVDAIKDDQIHVTFDGWRGAFDYWCNYRSRDIFPAG 200 (265)
T ss_dssp CEEEEECTTSTTCEEEEEEEEEETTEEEEEETTSCGGGCEEEETTCTTEECTT
T ss_pred cEEEeccCCCCCCEEEEEEEEecCCEEEEEeCCCCCcCCEEEECCCCCeecCc
Confidence 345554 457889999999999999999999999877666554 4566664
No 38
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=85.12 E-value=2.4 Score=26.60 Aligned_cols=29 Identities=17% Similarity=0.237 Sum_probs=24.1
Q ss_pred eeeecCCCcEEeEEEEEEeCC--eEEEEEcc
Q psy987 6 VEVCGENGAYYKVIVKMIKGD--FHVVEYLG 34 (114)
Q Consensus 6 VEv~g~ngawwkA~Vk~vkgd--~~vV~f~~ 34 (114)
|=+|=+.|-||+|.|..|... +++|.|+.
T Consensus 10 VLarwsDG~fYlGtI~~V~~~~~~clV~F~D 40 (58)
T 4hcz_A 10 VLARWTDGLLYLGTIKKVDSAREVCLVQFED 40 (58)
T ss_dssp EEEECTTSCEEEEEEEEEETTTTEEEEEETT
T ss_pred EEEEecCCCEEeEEEEEEecCCCEEEEEEcC
Confidence 446778899999999996655 99999984
No 39
>1wjr_A KIAA1617 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3
Probab=83.51 E-value=1.3 Score=31.10 Aligned_cols=44 Identities=18% Similarity=0.113 Sum_probs=34.8
Q ss_pred ecCCCcEEeEEEEEEeCCeEEEEEccCcc----eeeeeecCccccCCC
Q psy987 9 CGENGAYYKVIVKMIKGDFHVVEYLGCQS----TFTEIVPPERMRQKN 52 (114)
Q Consensus 9 ~g~ngawwkA~Vk~vkgd~~vV~f~~w~~----~~~eiv~~~RLrp~n 52 (114)
..++...|.|.|..+.|..+.|.|++|+. .+=.-+....|.|..
T Consensus 23 ~~~p~~~~vAtV~~v~g~rl~l~~dG~~~~~~~D~W~~~~s~~I~PvG 70 (127)
T 1wjr_A 23 SQNPFQYWIVSVIENVGGRLRLRYVGLEDTESYDQWLFYLDYRLRPVG 70 (127)
T ss_dssp SSCSSCEEEEECCCEETTEEEECBTTCSSCCSSCEEEETTCSSCBCTT
T ss_pred CCCCCcEEEEEEeeeeCCEEEEEecCCCCCCCCCEeEeCCCCCccccC
Confidence 44578999999999999999999999997 234445566677764
No 40
>2biv_A SCML2 protein, sex COMB on midleg-like protein 2; MBT, malignant brain tumor, transcription factor; 1.7A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 PDB: 1oi1_A 2vyt_A* 2p0k_A
Probab=83.47 E-value=2 Score=33.19 Aligned_cols=42 Identities=14% Similarity=0.146 Sum_probs=33.8
Q ss_pred ceeeee--cCCCcEEeEEEEEEeCCeEEEEEccCcceeeeeecC
Q psy987 4 LEVEVC--GENGAYYKVIVKMIKGDFHVVEYLGCQSTFTEIVPP 45 (114)
Q Consensus 4 l~VEv~--g~ngawwkA~Vk~vkgd~~vV~f~~w~~~~~eiv~~ 45 (114)
+-+|+. -+++.++.|.|.+|.|+.+.|.|++|+..|.+-+..
T Consensus 176 mKLEavD~~~p~~icvATV~~v~g~rl~v~fDgw~~~~D~W~~~ 219 (243)
T 2biv_A 176 MKLEAIDKKNPYLICPATIGDVKGDEVHITFDGWSGAFDYWCKY 219 (243)
T ss_dssp CEEEEECTTSTTCEEEEEEEEEETTEEEEEETTSCGGGCEEEET
T ss_pred CEEEEEccCCCCeEEEEEEEEecCCEEEEEECCCCCcCCEEEeC
Confidence 345554 457889999999999999999999999877665543
No 41
>3e9g_A Chromatin modification-related protein EAF3; chromatin remodeling, chromo domain, transcription factor, transcription regulation; 2.50A {Saccharomyces cerevisiae} PDB: 2k3x_A 3e9f_A*
Probab=82.31 E-value=1.8 Score=31.04 Aligned_cols=26 Identities=31% Similarity=0.512 Sum_probs=21.6
Q ss_pred eEEEEEccCcceeeeeecCccccCCC
Q psy987 27 FHVVEYLGCQSTFTEIVPPERMRQKN 52 (114)
Q Consensus 27 ~~vV~f~~w~~~~~eiv~~~RLrp~n 52 (114)
.|.|-|.+|...+-+=|+.+||...+
T Consensus 76 ~Y~VHY~GWn~~WDEWV~e~rvlk~~ 101 (130)
T 3e9g_A 76 CFFIHYQGWKSSWDEWVGYDRIRAYN 101 (130)
T ss_dssp EEEEEETTSCGGGCEEEETTTEECSS
T ss_pred eEEEEeCCCCCChhhccCHhhhhccC
Confidence 48888888888888888888888765
No 42
>3bdl_A Staphylococcal nuclease domain-containing protein 1; staphylococcal nuclease OB fold, tudor domain, cytoplasm, HOST-virus interaction, nucleus; HET: CIT; 1.90A {Homo sapiens}
Probab=82.23 E-value=2.1 Score=36.01 Aligned_cols=40 Identities=20% Similarity=0.438 Sum_probs=34.2
Q ss_pred CCcEEeEEEEEEeC-CeEEEEEccCcceeeeeecCccccCCCC
Q psy987 12 NGAYYKVIVKMIKG-DFHVVEYLGCQSTFTEIVPPERMRQKNT 53 (114)
Q Consensus 12 ngawwkA~Vk~vkg-d~~vV~f~~w~~~~~eiv~~~RLrp~n~ 53 (114)
.|.||.|+|..+.+ +.+.|.|-.+.. .+.|+...|||.+.
T Consensus 424 d~~wyRa~I~~v~~~~~~~V~fvDyGn--~e~v~~~~Lr~l~~ 464 (570)
T 3bdl_A 424 DGEWYRARVEKVESPAKIHVFYIDYGN--REVLPSTRLGTLSP 464 (570)
T ss_dssp TSCEEEEEEEEEEETTEEEEEETTTCC--EEEECGGGEECCCG
T ss_pred CCCEEEEEEEEEcCCCeEEEEEEeCCC--eEEEEHHHCccCCH
Confidence 68899999999998 899999998665 57788889998874
No 43
>2e5p_A Protein PHF1, PHD finger protein 1; tudor domain, PHF1 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=81.71 E-value=3.7 Score=26.45 Aligned_cols=29 Identities=17% Similarity=0.256 Sum_probs=24.5
Q ss_pred eeeecCCCcEEeEEEEEEe--CCeEEEEEcc
Q psy987 6 VEVCGENGAYYKVIVKMIK--GDFHVVEYLG 34 (114)
Q Consensus 6 VEv~g~ngawwkA~Vk~vk--gd~~vV~f~~ 34 (114)
|=.|=+.|-||+|.|+.|. .++++|.|+.
T Consensus 16 VLarWsDGlfYlGtV~kV~~~~~~ClV~FeD 46 (68)
T 2e5p_A 16 VLARWTDGLLYLGTIKKVDSAREVCLVQFED 46 (68)
T ss_dssp EEEECTTSSEEEEEEEEEETTTTEEEEEETT
T ss_pred EEEEecCCcEEEeEEEEEecCCcEEEEEEcc
Confidence 4456678999999999999 6799999974
No 44
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=80.24 E-value=3 Score=26.74 Aligned_cols=26 Identities=15% Similarity=0.174 Sum_probs=22.2
Q ss_pred ecCCCcEEeEEEEEEeC--CeEEEEEcc
Q psy987 9 CGENGAYYKVIVKMIKG--DFHVVEYLG 34 (114)
Q Consensus 9 ~g~ngawwkA~Vk~vkg--d~~vV~f~~ 34 (114)
|=+-|-+|+|.|+.|.. ..++|.|+.
T Consensus 23 ~wtDGl~Y~gtI~~V~~~~gtC~V~F~D 50 (66)
T 2eqj_A 23 RWSDGLFYLGTIKKINILKQSCFIIFED 50 (66)
T ss_dssp ECTTSCEEEEEEEEEETTTTEEEEEETT
T ss_pred EEccCcEEEeEEEEEccCCcEEEEEEcc
Confidence 33679999999999996 699999974
No 45
>2biv_A SCML2 protein, sex COMB on midleg-like protein 2; MBT, malignant brain tumor, transcription factor; 1.7A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 PDB: 1oi1_A 2vyt_A* 2p0k_A
Probab=79.56 E-value=2.2 Score=32.96 Aligned_cols=49 Identities=12% Similarity=0.043 Sum_probs=36.8
Q ss_pred ceeeeecC--CCcEEeEEEEEEeCCeEEEEEccCcceeeee--ecCccccCCC
Q psy987 4 LEVEVCGE--NGAYYKVIVKMIKGDFHVVEYLGCQSTFTEI--VPPERMRQKN 52 (114)
Q Consensus 4 l~VEv~g~--ngawwkA~Vk~vkgd~~vV~f~~w~~~~~ei--v~~~RLrp~n 52 (114)
+-+|+.-. ++.+|.|.|.++.|..+.|.|++|+..+.+- ....+|.|..
T Consensus 67 mKLEa~D~~~~~~~~vATV~~v~g~~l~l~~dG~d~~~DfW~~~~S~~I~PvG 119 (243)
T 2biv_A 67 MKLEARDPRNATSVCIATVIGITGARLRLRLDGSDNRNDFWRLVDSPDIQPVG 119 (243)
T ss_dssp CEEEEEETTEEEEEEEEEEEEEETTEEEEEETTSCSSSCEEEETTCTTEECTT
T ss_pred CEEEEecCCCCCcEEEEEEEEEeCCEEEEEECCCCCCCCEeecCCCCccccCh
Confidence 34455433 5789999999999999999999999765444 4555677764
No 46
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=79.16 E-value=2.6 Score=27.88 Aligned_cols=29 Identities=17% Similarity=0.256 Sum_probs=24.0
Q ss_pred eeeecCCCcEEeEEEEEEe--CCeEEEEEcc
Q psy987 6 VEVCGENGAYYKVIVKMIK--GDFHVVEYLG 34 (114)
Q Consensus 6 VEv~g~ngawwkA~Vk~vk--gd~~vV~f~~ 34 (114)
|=+|-+.|-||+|.|+.|. ++.++|.|+.
T Consensus 33 VLarwsDGlfYLGTI~kV~~~~e~ClV~F~D 63 (79)
T 2m0o_A 33 VLARWTDGLLYLGTIKKVDSAREVCLVQFED 63 (79)
T ss_dssp EEBCCTTSCCCEEEEEEEETTTTEEEEEETT
T ss_pred EEEEecCCCEEeEEEEEeccCCCEEEEEEcC
Confidence 4456678999999999666 7899999974
No 47
>1oz2_A Lethal(3)malignant brain tumor-like protein; propeller, transcription repressor, three malignant brain TU repeats, transcription; HET: MES; 1.55A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 b.34.9.3 PDB: 1oyx_A* 1oz3_A* 3oq5_A* 2rhi_A* 2rhx_A* 2rjd_A 2rjc_A 2rje_A* 2rjf_A* 3uwn_A* 2pqw_A* 3p8h_A* 2rhu_A* 2rhy_A* 2rhz_A* 2ri3_A* 2ri2_A* 2ri5_A*
Probab=78.97 E-value=2.7 Score=33.70 Aligned_cols=36 Identities=6% Similarity=0.063 Sum_probs=31.2
Q ss_pred CCCcEEeEEEEEEeCCeEEEEEccCcceeeeeecCc
Q psy987 11 ENGAYYKVIVKMIKGDFHVVEYLGCQSTFTEIVPPE 46 (114)
Q Consensus 11 ~ngawwkA~Vk~vkgd~~vV~f~~w~~~~~eiv~~~ 46 (114)
++.....|.|+.|+|+.+-|.|++|+..|...+..+
T Consensus 266 ~p~~ic~AtV~~v~~~~l~v~fDgw~~~~d~w~~~d 301 (331)
T 1oz2_A 266 NPALIRVASVEDVEDHRIKIHFDGWSHGYDFWIDAD 301 (331)
T ss_dssp STTCEEEEEEEEECSSEEEEEETTBCGGGCEEEETT
T ss_pred CCCcEEeeEEEEEcCCEEEEEeCCCCCcCCEEEECC
Confidence 367799999999999999999999999887777544
No 48
>2e5q_A PHD finger protein 19; tudor domain, isoform B, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=77.01 E-value=3.2 Score=26.42 Aligned_cols=29 Identities=21% Similarity=0.243 Sum_probs=24.0
Q ss_pred eeeecCCCcEEeEEEEEEe--CCeEEEEEcc
Q psy987 6 VEVCGENGAYYKVIVKMIK--GDFHVVEYLG 34 (114)
Q Consensus 6 VEv~g~ngawwkA~Vk~vk--gd~~vV~f~~ 34 (114)
|=.|=+.|-+|+|.|+.|. .++++|.|+.
T Consensus 14 VLarWsDGlfYlgtV~kV~~~~~~ClV~FeD 44 (63)
T 2e5q_A 14 VLCRWTDGLYYLGKIKRVSSSKQSCLVTFED 44 (63)
T ss_dssp EEEECTTSCEEEEEECCCCSTTSEEEEEETT
T ss_pred EEEEecCCCEEEEEEEEEecCCCEEEEEEcc
Confidence 3355578999999999998 6799999974
No 49
>2r58_A Polycomb protein SCM; MBT repeat, sex COMB on midleg, DI-methyl lysine, regulator, developmental protein, metal-binding, nucleus; HET: MLY; 2.00A {Drosophila melanogaster} PDB: 2r57_A* 2r5a_A* 2r5m_A*
Probab=75.55 E-value=3.4 Score=32.39 Aligned_cols=41 Identities=10% Similarity=-0.071 Sum_probs=31.4
Q ss_pred CCCcEEeEEEEEEeCCeEEEEEccCcceeeeee--cCccccCC
Q psy987 11 ENGAYYKVIVKMIKGDFHVVEYLGCQSTFTEIV--PPERMRQK 51 (114)
Q Consensus 11 ~ngawwkA~Vk~vkgd~~vV~f~~w~~~~~eiv--~~~RLrp~ 51 (114)
++..+|.|.|.+|.|+.+.|.|++|+..+.+-+ ....|-|.
T Consensus 48 ~~~~icvATV~~v~g~~l~l~~DG~d~~~DfW~~~~S~~I~Pv 90 (265)
T 2r58_A 48 NVTSTCIATVVGVLGSRLRLRLDGSDSQNDFWRLVDSTEIHAI 90 (265)
T ss_dssp EEEEEEEEEEEEEETTEEEEEETTSCSSCCEEEETTCTTEECT
T ss_pred CCCCEEEEEEEEEeCCEEEEEeCCCCCcCCEeEeCCCCCeecc
Confidence 356799999999999999999999987665543 33345555
No 50
>3ut1_A Lethal(3)malignant brain tumor-like protein 3; chromatin modification, transcription repression, MBT repeat structural genomics; HET: EPE; 2.05A {Homo sapiens} PDB: 4fl6_A* 1wjs_A
Probab=73.68 E-value=5.7 Score=31.79 Aligned_cols=37 Identities=8% Similarity=-0.001 Sum_probs=31.3
Q ss_pred cCCCcEEeEEEEEEeCCeEEEEEccCcceeeeeecCc
Q psy987 10 GENGAYYKVIVKMIKGDFHVVEYLGCQSTFTEIVPPE 46 (114)
Q Consensus 10 g~ngawwkA~Vk~vkgd~~vV~f~~w~~~~~eiv~~~ 46 (114)
-+++.-+.|.|+.++|+.+.|.|++|+.+|-..+..+
T Consensus 260 ~~p~licvATV~~v~g~~l~v~fDgw~~~~d~w~~~~ 296 (324)
T 3ut1_A 260 RNPMFIRVATVADTDDHRVKVHFDGWNNCYDYWIDAD 296 (324)
T ss_dssp SSTTCEEEEEEEEECSSEEEEEETTSCGGGCEEEETT
T ss_pred CCCCceeEEEEEEecCCEEEEEeCCCCCCCCEEEeCC
Confidence 3577899999999999999999999998876665543
No 51
>3dlm_A Histone-lysine N-methyltransferase setdb1; setdb1_human, structural genomics, structural genomics consortium, SGC, alternative splicing; 1.77A {Homo sapiens}
Probab=71.93 E-value=4.4 Score=31.17 Aligned_cols=24 Identities=21% Similarity=0.469 Sum_probs=22.3
Q ss_pred CCcEEeEEEEEEeCCeEEEEEccC
Q psy987 12 NGAYYKVIVKMIKGDFHVVEYLGC 35 (114)
Q Consensus 12 ngawwkA~Vk~vkgd~~vV~f~~w 35 (114)
||.||.|+|..+-+-++.|-|++=
T Consensus 170 ~g~w~~~~V~~vD~SLv~v~f~~d 193 (213)
T 3dlm_A 170 EGTWWKSRVEEVDGSLVRILFLDD 193 (213)
T ss_dssp TTEEEEEEEEEEETTEEEEEETTT
T ss_pred cCcEEEEEEEEEcceeEEEEEcCC
Confidence 789999999999999999999953
No 52
>1oz2_A Lethal(3)malignant brain tumor-like protein; propeller, transcription repressor, three malignant brain TU repeats, transcription; HET: MES; 1.55A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 b.34.9.3 PDB: 1oyx_A* 1oz3_A* 3oq5_A* 2rhi_A* 2rhx_A* 2rjd_A 2rjc_A 2rje_A* 2rjf_A* 3uwn_A* 2pqw_A* 3p8h_A* 2rhu_A* 2rhy_A* 2rhz_A* 2ri3_A* 2ri2_A* 2ri5_A*
Probab=71.08 E-value=7.6 Score=31.04 Aligned_cols=48 Identities=10% Similarity=0.120 Sum_probs=36.7
Q ss_pred eeeeec--CCCcEEeEEEEEEeCCeEEEEEccCcceeeeeecC--ccccCCC
Q psy987 5 EVEVCG--ENGAYYKVIVKMIKGDFHVVEYLGCQSTFTEIVPP--ERMRQKN 52 (114)
Q Consensus 5 ~VEv~g--~ngawwkA~Vk~vkgd~~vV~f~~w~~~~~eiv~~--~RLrp~n 52 (114)
-+|+.- +++.+|.|.|.++.|+.+.|.|.+|+..+..-+.. -.|.|..
T Consensus 154 KLEavD~~np~~icvATV~~v~g~r~~v~~Dg~~~~~D~w~~~~S~~I~PVG 205 (331)
T 1oz2_A 154 KLEAVDRMNPSLVCVASVTDVVDSRFLVHFDNWDDTYDYWCDPSSPYIHPVG 205 (331)
T ss_dssp EEEEECTTSTTCEEEEEEEEEETTEEEEEETTSCGGGCEEECTTCTTEECTT
T ss_pred EEEeccCCCCCcEEEEEEEEeeCCEEEEEeCCCCCccCEEEecCCCCccCCc
Confidence 344433 47889999999999999999999999877766654 3455553
No 53
>3h6z_A Polycomb protein SFMBT; MBT, MBR repeat, aromatic CAGE, chromatin regulator, DNA-BIN metal-binding, nucleus, repressor, transcription; HET: MLZ SUC; 2.80A {Drosophila melanogaster}
Probab=70.02 E-value=5.8 Score=33.18 Aligned_cols=38 Identities=13% Similarity=0.140 Sum_probs=32.7
Q ss_pred ecCCCcEEeEEEEEEeCCeEEEEEccCcceeeeeecCc
Q psy987 9 CGENGAYYKVIVKMIKGDFHVVEYLGCQSTFTEIVPPE 46 (114)
Q Consensus 9 ~g~ngawwkA~Vk~vkgd~~vV~f~~w~~~~~eiv~~~ 46 (114)
+-+++....|.|++|+|+.+.|.|+||+..|.+.+..+
T Consensus 388 ~~np~~icvATV~~v~~~~~~i~fDgw~~~~d~w~~~~ 425 (447)
T 3h6z_A 388 LMDPRLVCVATVARVVGRLLKVHFDGWTDEYDQWLDCE 425 (447)
T ss_dssp TTSTTCEEEEEEEEEETTEEEEECTTSCGGGCEEEETT
T ss_pred CCCCCcEEEEEEeEecCCEEEEEeCCCCCcCCEEEecC
Confidence 34578899999999999999999999999888776543
No 54
>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=66.92 E-value=7.2 Score=25.54 Aligned_cols=33 Identities=24% Similarity=0.117 Sum_probs=29.6
Q ss_pred CcceeeeecCCCcEEeEEEEEEeCCeEEEEEcc
Q psy987 2 DELEVEVCGENGAYYKVIVKMIKGDFHVVEYLG 34 (114)
Q Consensus 2 ~~l~VEv~g~ngawwkA~Vk~vkgd~~vV~f~~ 34 (114)
++|+|+|.+..|.=-.+.|++-.+..|.|.|.-
T Consensus 22 ~~l~v~V~~PsG~~~~~~v~d~~dGtY~v~ytP 54 (93)
T 2d7n_A 22 GELTGEVRMPSGKTARPNITDNKDGTITVRYAP 54 (93)
T ss_dssp SCEEEEEECTTSCEECCEEEECSSSCEEEEECC
T ss_pred CCEEEEEECCCCCccceEEEECCCCEEEEEEEc
Confidence 578999999999888889999999999999975
No 55
>2ee9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.67 E-value=7.3 Score=25.79 Aligned_cols=33 Identities=21% Similarity=0.073 Sum_probs=29.9
Q ss_pred CcceeeeecCCCcEEeEEEEEEeCCeEEEEEcc
Q psy987 2 DELEVEVCGENGAYYKVIVKMIKGDFHVVEYLG 34 (114)
Q Consensus 2 ~~l~VEv~g~ngawwkA~Vk~vkgd~~vV~f~~ 34 (114)
++|+|+|.+-.|.=-.+.|++..+..|.|.|.-
T Consensus 30 ~~ltv~V~~PsG~~~~~~v~d~~dGtY~v~ytP 62 (95)
T 2ee9_A 30 GEITGEVHMPSGKTATPEIVDNKDGTVTVRYAP 62 (95)
T ss_dssp TSEEEEEECTTSCEECCEEEECSSSCEEEECCC
T ss_pred CCEEEEEECCCCCccccEEEeCCCCeEEEEEEe
Confidence 579999999999888899999999999999965
No 56
>3f70_A Lethal(3)malignant brain tumor-like 2 protein; MBT, chromatin regulator, metal-binding, nucleus, transcript transcription regulation, zinc-finger; HET: MLZ; 2.10A {Homo sapiens} PDB: 3dbb_A* 3cey_A
Probab=63.04 E-value=12 Score=31.31 Aligned_cols=36 Identities=17% Similarity=0.142 Sum_probs=31.1
Q ss_pred cCCCcEEeEEEEEEeCCeEEEEEccCcceeeeeecC
Q psy987 10 GENGAYYKVIVKMIKGDFHVVEYLGCQSTFTEIVPP 45 (114)
Q Consensus 10 g~ngawwkA~Vk~vkgd~~vV~f~~w~~~~~eiv~~ 45 (114)
-+++....|.|++|.|+.+.|.|++|+..|.+.+..
T Consensus 379 ~np~~icvATV~~v~~~~l~i~fDgw~~~~d~w~~~ 414 (456)
T 3f70_A 379 MEPRLICVATVKRVVHRLLSIHFDGWDSEYDQWVDC 414 (456)
T ss_dssp TSTTCEEEEEEEEEETTEEEEEETTSCGGGCEEEET
T ss_pred CCCCcEEEEEEEEecCCEEEEEeCCCCCCCCeEeec
Confidence 347789999999999999999999999988776643
No 57
>3cnk_A Filamin-A; FLNA24, X-RAY crystalography, homodimer, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; 1.65A {Homo sapiens}
Probab=61.20 E-value=15 Score=22.97 Aligned_cols=33 Identities=27% Similarity=0.333 Sum_probs=27.3
Q ss_pred CcceeeeecCCCcEEeEEEEEEeCCeEEEEEcc
Q psy987 2 DELEVEVCGENGAYYKVIVKMIKGDFHVVEYLG 34 (114)
Q Consensus 2 ~~l~VEv~g~ngawwkA~Vk~vkgd~~vV~f~~ 34 (114)
+.|.|.+.|..|.--...|++.++..|.|.|.-
T Consensus 30 ~~l~v~v~~p~g~~~~~~v~d~~dGty~v~Y~p 62 (89)
T 3cnk_A 30 NMLLVGVHGPRTPCEEILVKHVGSRLYSVSYLL 62 (89)
T ss_dssp CCEEEEEECSSSCCSEEEEEEEETTEEEEEEEC
T ss_pred CcEEEEEECCCCCceeEEEEECCCCEEEEEEEE
Confidence 457899998887656778999999999999964
No 58
>3rgh_A Filamin-A; cell adhesion, cytoskeleton-complex, disease mutation, immun like, cytoskeleton, actin-binding, cell junction, shape; HET: CME; 2.44A {Homo sapiens} SCOP: b.1.18.0
Probab=57.90 E-value=16 Score=23.68 Aligned_cols=33 Identities=27% Similarity=0.511 Sum_probs=27.5
Q ss_pred CcceeeeecCCCcEEeEEEEEEeCCeEEEEEcc
Q psy987 2 DELEVEVCGENGAYYKVIVKMIKGDFHVVEYLG 34 (114)
Q Consensus 2 ~~l~VEv~g~ngawwkA~Vk~vkgd~~vV~f~~ 34 (114)
++|.|++.+..|.=-...|++-++..|.|.|.-
T Consensus 39 ~~l~v~i~~~~g~~~~~~v~d~~dGty~V~Y~p 71 (100)
T 3rgh_A 39 AELTIEICSEAGLPAEVYIQDHGDGTHTITYIP 71 (100)
T ss_dssp CCEEEEEECTTSCBCEEEEEECSSSEEEEEEEC
T ss_pred ceEEEEEECCCCCEeEEEEEeCCCCEEEEEEEe
Confidence 468999988877656688999999999999964
No 59
>3ut1_A Lethal(3)malignant brain tumor-like protein 3; chromatin modification, transcription repression, MBT repeat structural genomics; HET: EPE; 2.05A {Homo sapiens} PDB: 4fl6_A* 1wjs_A
Probab=54.83 E-value=15 Score=29.32 Aligned_cols=36 Identities=6% Similarity=0.042 Sum_probs=29.9
Q ss_pred CCCcEEeEEEEEEeCCeEEEEEccCcceeeeeecCc
Q psy987 11 ENGAYYKVIVKMIKGDFHVVEYLGCQSTFTEIVPPE 46 (114)
Q Consensus 11 ~ngawwkA~Vk~vkgd~~vV~f~~w~~~~~eiv~~~ 46 (114)
+++..+.|.|.+|.|+.+.|.|++|+..+...+..+
T Consensus 157 ~p~~icvATV~~V~g~~l~v~~Dg~~~~~d~w~~~~ 192 (324)
T 3ut1_A 157 NPSFICVATVTDMVDNRFLVHFDNWDESYDYWCEAS 192 (324)
T ss_dssp EEEEEEEEEEEEEETTEEEEEETTSCGGGCEEECTT
T ss_pred CCCcEEEEEEEEEECCEEEEEECCCCCcCCEEEECC
Confidence 356689999999999999999999998776666433
No 60
>2dia_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=54.71 E-value=18 Score=23.71 Aligned_cols=33 Identities=21% Similarity=0.289 Sum_probs=27.5
Q ss_pred CcceeeeecCCCcEEeEEEEEEeCCeEEEEEcc
Q psy987 2 DELEVEVCGENGAYYKVIVKMIKGDFHVVEYLG 34 (114)
Q Consensus 2 ~~l~VEv~g~ngawwkA~Vk~vkgd~~vV~f~~ 34 (114)
+.|+|++.+..|.=-...|++.++..|.|.|.-
T Consensus 42 ~~l~v~i~~~~g~~~~~~v~d~~dGty~v~Y~p 74 (113)
T 2dia_A 42 GALGLEAVSDSGTKAEVSIQNNKDGTYAVTYVP 74 (113)
T ss_dssp CCEEEEEEETTTEECEEEEEECTTSEEEEEEEC
T ss_pred ccEEEEEECCCCCEeeEEEEECCCCEEEEEEEe
Confidence 468899998877666778899999999999964
No 61
>2dlg_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=53.04 E-value=17 Score=23.96 Aligned_cols=33 Identities=12% Similarity=0.262 Sum_probs=29.4
Q ss_pred CcceeeeecCCCcEEeEEEEEEeCCeEEEEEcc
Q psy987 2 DELEVEVCGENGAYYKVIVKMIKGDFHVVEYLG 34 (114)
Q Consensus 2 ~~l~VEv~g~ngawwkA~Vk~vkgd~~vV~f~~ 34 (114)
++|+|+|.+..|.=-.+.|++..+..|.|.|--
T Consensus 31 ~~l~v~v~~P~G~~~~~~v~d~~dGty~v~ytP 63 (102)
T 2dlg_A 31 SDMSAHVTSPSGRVTEAEIVPMGKNSHCVRFVP 63 (102)
T ss_dssp GGCEEEEECTTSCEEECEEEECSSSEEEEEBCC
T ss_pred CCEEEEEECCCCCEeeeEEEECCCCEEEEEEEe
Confidence 478999999999888899999999999999965
No 62
>2l8d_A Lamin-B receptor; DNA binding protein; NMR {Gallus gallus}
Probab=51.26 E-value=45 Score=21.23 Aligned_cols=38 Identities=21% Similarity=0.316 Sum_probs=26.3
Q ss_pred cCCCcEEeEEEEEEe--CCeEEEEEccCcceeeeeecCccccCC
Q psy987 10 GENGAYYKVIVKMIK--GDFHVVEYLGCQSTFTEIVPPERMRQK 51 (114)
Q Consensus 10 g~ngawwkA~Vk~vk--gd~~vV~f~~w~~~~~eiv~~~RLrp~ 51 (114)
|+++ ||.|+|+++- ...|+|-|.. .. .+-+...-|+|.
T Consensus 22 Gd~~-yYparI~Si~s~~~~Y~V~fKd-gT--~e~L~~kDIkp~ 61 (66)
T 2l8d_A 22 GSVL-YYEVQVTSYDDASHLYTVKYKD-GT--ELALKESDIRLQ 61 (66)
T ss_dssp TSSC-EEEEEEEEEETTTTEEEEEETT-SC--EEEEEGGGEECS
T ss_pred CCcc-ceEEEEEEeccCCceEEEEecC-CC--EEeechhccccc
Confidence 5554 9999998885 4589999986 33 345555556655
No 63
>2e9j_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.23 E-value=16 Score=24.27 Aligned_cols=33 Identities=24% Similarity=0.295 Sum_probs=27.1
Q ss_pred CcceeeeecCCCcEEeEEEEEEeCCeEEEEEcc
Q psy987 2 DELEVEVCGENGAYYKVIVKMIKGDFHVVEYLG 34 (114)
Q Consensus 2 ~~l~VEv~g~ngawwkA~Vk~vkgd~~vV~f~~ 34 (114)
+.|+|++.|..|.=-.+.|++.++..|.|.|.-
T Consensus 54 ~~l~v~v~~p~g~~~~~~v~d~~dGty~v~Y~p 86 (119)
T 2e9j_A 54 GLLAVQITDQEGKPKRAIVHDNKDGTYAVTYIP 86 (119)
T ss_dssp CCEECCEECTTCCCCCEEEEECCSSEEEEEECC
T ss_pred CeEEEEEECCCCCEEEEEEEECCCCEEEEEEEe
Confidence 468899998887666788999888899999964
No 64
>1v05_A Filamin C; actin-binding protein, immunoglobulin; 1.43A {Homo sapiens} SCOP: b.1.18.10 PDB: 2eed_A
Probab=49.96 E-value=22 Score=22.46 Aligned_cols=33 Identities=24% Similarity=0.219 Sum_probs=26.2
Q ss_pred CcceeeeecCCCcEEeEEEEEEeCCeEEEEEcc
Q psy987 2 DELEVEVCGENGAYYKVIVKMIKGDFHVVEYLG 34 (114)
Q Consensus 2 ~~l~VEv~g~ngawwkA~Vk~vkgd~~vV~f~~ 34 (114)
+.|.|.+.|..|.--...|++.++..|.|.|.-
T Consensus 37 ~~l~v~v~~p~~~~~~~~v~d~~dGty~v~Y~p 69 (96)
T 1v05_A 37 NMMMVGVHGPKTPCEEVYVKHMGNRVYNVTYTV 69 (96)
T ss_dssp CCEEEEEECSSSCCSEEEEEECSTTEEEEEEEC
T ss_pred CcEEEEEECCCCCeeEEEEEeCCCCEEEEEEEe
Confidence 457889988877544678899999999999964
No 65
>3feo_A MBT domain-containing protein 1; MBTL1, structural genomics, structural genomics consortium, metal-binding, nucleus, zinc-finger; 2.50A {Homo sapiens}
Probab=48.14 E-value=27 Score=28.98 Aligned_cols=33 Identities=15% Similarity=0.180 Sum_probs=28.3
Q ss_pred CCCcEEeEEEEEEeCCeEEEEEccCcceeeeee
Q psy987 11 ENGAYYKVIVKMIKGDFHVVEYLGCQSTFTEIV 43 (114)
Q Consensus 11 ~ngawwkA~Vk~vkgd~~vV~f~~w~~~~~eiv 43 (114)
+++.-..|.|++|.|+.+.|.|++|+..+.+-+
T Consensus 376 np~~IcvATV~~v~~~~l~v~fDgw~~~~d~w~ 408 (437)
T 3feo_A 376 EPRLICVATVTRIIHRLLRIHFDGWEEEYDQWV 408 (437)
T ss_dssp STTCEEEEEEEEEETTEEEEEETTSCGGGCEEE
T ss_pred CCCcEEEEEEeEEcCCEEEEEECCCCCcCCeEE
Confidence 477788999999999999999999998775443
No 66
>2daq_A WHSC1L1 protein, isoform long; PWWP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.2
Probab=47.05 E-value=23 Score=23.34 Aligned_cols=43 Identities=9% Similarity=0.014 Sum_probs=26.7
Q ss_pred eeecCCCcEEeEEEEEE------------eCCeEEEEEccCcceeeeeecCccccCCCC
Q psy987 7 EVCGENGAYYKVIVKMI------------KGDFHVVEYLGCQSTFTEIVPPERMRQKNT 53 (114)
Q Consensus 7 Ev~g~ngawwkA~Vk~v------------kgd~~vV~f~~w~~~~~eiv~~~RLrp~n~ 53 (114)
.++| .-||.|+|-+. ....+.|.|-+ +.+|. -+...+|.|-..
T Consensus 18 K~~g--~p~WPa~V~~~~~~p~~~~~~~~~~~~~~V~FFg-~~~~a-wv~~~~l~p~~~ 72 (110)
T 2daq_A 18 KLGN--YRWWPAEICNPRSVPLNIQGLKHDLGDFPVFFFG-SHDYY-WVHQGRVFPYVE 72 (110)
T ss_dssp ECSS--SCEEEEEECCTTTSCHHHHTSCCCSSCEEEEETT-TTEEE-EECSSSSEECCS
T ss_pred EeCC--CCCCceeeCChhhCCHHHhhccCCCCcEEEEEec-CCCEE-EEcHHHCcCcch
Confidence 3445 44999999766 23457788876 34443 345666666654
No 67
>2jz2_A SSL0352 protein; SH3-like, synechocystis SP. PCC 6803, targe PSI, protein structure initiative, northeast structural GEN consortium, NESG; NMR {Synechocystis SP} PDB: 3c4s_A
Probab=45.97 E-value=37 Score=21.58 Aligned_cols=41 Identities=12% Similarity=0.115 Sum_probs=28.6
Q ss_pred ceeeeecCCCc--EEeEEEEEEeCCeEEEEEcc--Ccceeeeeec
Q psy987 4 LEVEVCGENGA--YYKVIVKMIKGDFHVVEYLG--CQSTFTEIVP 44 (114)
Q Consensus 4 l~VEv~g~nga--wwkA~Vk~vkgd~~vV~f~~--w~~~~~eiv~ 44 (114)
.+|-|.-.+-. =|.++|..|-++-+.|=|++ |+.--++..+
T Consensus 6 ~~V~V~np~~~Yy~y~G~VQRvsdgkaaVLFEGGnWDKLVTf~L~ 50 (66)
T 2jz2_A 6 ATVRVTNVDDTYYRFEGLVQRVSDGKAAVLFENGNWDKLVTFRLS 50 (66)
T ss_dssp CEEEECCTTSTTBTCEEEEEEEETTEEEEEEESSSCEEEEEEEST
T ss_pred CEEEEeCCCCcccceeEEEEEecCCcEEEEecCCCceeEEEEEhh
Confidence 34444433322 37899999999999999998 9975444443
No 68
>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}
Probab=45.75 E-value=18 Score=22.12 Aligned_cols=10 Identities=0% Similarity=0.235 Sum_probs=7.3
Q ss_pred CCCcEEeEEE
Q psy987 11 ENGAYYKVIV 20 (114)
Q Consensus 11 ~ngawwkA~V 20 (114)
+.|+||+|..
T Consensus 42 ~~~gWw~g~~ 51 (80)
T 2i0n_A 42 QENKWFMGQL 51 (80)
T ss_dssp SSSSEEEEEE
T ss_pred CCCCEEEEEE
Confidence 4555999974
No 69
>2ds4_A Tripartite motif protein 45; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.73 E-value=42 Score=21.36 Aligned_cols=42 Identities=17% Similarity=0.165 Sum_probs=28.7
Q ss_pred cceeeeecCCC--cEEeEEEEEEeCCeEEEEEcc-Ccceeeeeec
Q psy987 3 ELEVEVCGENG--AYYKVIVKMIKGDFHVVEYLG-CQSTFTEIVP 44 (114)
Q Consensus 3 ~l~VEv~g~ng--awwkA~Vk~vkgd~~vV~f~~-w~~~~~eiv~ 44 (114)
.+.|++.+..| .=-.+.|++.++..|.|.|.- |.-.|+.-|.
T Consensus 50 ~~~v~i~~p~~~~~~~~~~v~D~~dGty~v~y~p~~~G~y~i~V~ 94 (113)
T 2ds4_A 50 NVQVAVVPKDKKDSPVRTMVQDNKDGTYYISYTPKEPGVYTVWVC 94 (113)
T ss_dssp CEEEEEEESSCSSCCCEEEEECCSSSEEEEEEECSSSEEEEEEEE
T ss_pred eEEEEEEecCCCCceeEEEEEECCCCEEEEEEEeCCCeEEEEEEE
Confidence 56788877664 344567888888889999976 5545544443
No 70
>3db3_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, tandem tudor domains, LI metal binding, DNA replication; HET: M3L; 2.40A {Homo sapiens} PDB: 3db4_A 2l3r_A*
Probab=45.05 E-value=89 Score=22.94 Aligned_cols=63 Identities=16% Similarity=0.235 Sum_probs=43.4
Q ss_pred eeeecC-CCcEEeEEEEEEe------------------CC--eEEEEEccCcceeeeeecCccccCCCC-----------
Q psy987 6 VEVCGE-NGAYYKVIVKMIK------------------GD--FHVVEYLGCQSTFTEIVPPERMRQKNT----------- 53 (114)
Q Consensus 6 VEv~g~-ngawwkA~Vk~vk------------------gd--~~vV~f~~w~~~~~eiv~~~RLrp~n~----------- 53 (114)
|..|-. -|||.-|+|..|- ++ .|=|.|+.+...-..-++..-+||..-
T Consensus 17 VDarD~~~GAWFEA~Iv~Vtr~~~~~~~p~~s~~~~~~~edviYhVkyddype~gvv~~~~~~iRpRARt~l~w~~L~vG 96 (161)
T 3db3_A 17 VDARDTNMGAWFEAQVVRVTRKAPSRDEPCSSTSRPALEEDVIYHVKYDDYPENGVVQMNSRDVRARARTIIKWQDLEVG 96 (161)
T ss_dssp EEEECTTTCCEEEEEEEEEEEC-----------------CCEEEEEEESSCGGGCEEEEEGGGEECCCCCBCCGGGCCTT
T ss_pred eeeeccCCCcceEEEEEEEEecCCCCCCcccccccCCCcCceEEEEEeccCccCCeEecchhccccceEEeccHHHCCcC
Confidence 666655 6999999998743 13 577999987655555666666776641
Q ss_pred -------C--CCCCCCceEEEEEc
Q psy987 54 -------N--PPIDAKTFHKFDIE 68 (114)
Q Consensus 54 -------n--~pm~K~~F~~ie~~ 68 (114)
| .|-.+|=.|=++|.
T Consensus 97 qvVMvNYN~d~PkerGfWYDaeI~ 120 (161)
T 3db3_A 97 QVVMLNYNPDNPKERGFWYDAEIS 120 (161)
T ss_dssp CEEEEEECSSSTTSCCEEEEEEEE
T ss_pred cEEEEecCCCCccccceeEEEEEe
Confidence 2 47778888877776
No 71
>2dig_A Lamin-B receptor; tudor domain, integral nuclear envelope inner membrane protein, nuclear protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=43.79 E-value=61 Score=20.68 Aligned_cols=40 Identities=15% Similarity=0.262 Sum_probs=27.9
Q ss_pred cCCCcEEeEEEEEEe--CCeEEEEEccCcceeeeeecCccccCCCC
Q psy987 10 GENGAYYKVIVKMIK--GDFHVVEYLGCQSTFTEIVPPERMRQKNT 53 (114)
Q Consensus 10 g~ngawwkA~Vk~vk--gd~~vV~f~~w~~~~~eiv~~~RLrp~n~ 53 (114)
|+++ ||.|+|+.+- ...|+|-|.. .. .+-+...-|+|.++
T Consensus 25 Gd~~-yYparItSits~~~~Y~VkfKd-gT--~e~L~~kDIKp~~~ 66 (68)
T 2dig_A 25 GSSL-YYEVEILSHDSTSQLYTVKYKD-GT--ELELKENDIKSGPS 66 (68)
T ss_dssp TTCC-EEEEEEEEEETTTTEEEEECTT-SC--EEEEETTTEECCCC
T ss_pred CCcc-ceEEEEEEeccCCceEEEEecC-CC--EEEechhccccCCC
Confidence 6555 9999998885 4589999986 33 45555566666553
No 72
>2d7m_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=43.68 E-value=27 Score=22.91 Aligned_cols=33 Identities=21% Similarity=0.188 Sum_probs=26.0
Q ss_pred CcceeeeecCCCcEEeEEEEEEeCCeEEEEEcc
Q psy987 2 DELEVEVCGENGAYYKVIVKMIKGDFHVVEYLG 34 (114)
Q Consensus 2 ~~l~VEv~g~ngawwkA~Vk~vkgd~~vV~f~~ 34 (114)
+.|.|++.|..|.=-.+.|++.++..|.|.|.-
T Consensus 44 ~~l~V~v~~p~g~~~~~~v~d~~dGty~v~Y~p 76 (115)
T 2d7m_A 44 GLLTVQILDPEGKPKKANIRDNGDGTYTVSYLP 76 (115)
T ss_dssp SCEEEEEECTTSCBCCEEEEECSSSCEEEEECC
T ss_pred CEEEEEEECCCCCeeeeEEEECCCCEEEEEEEe
Confidence 357888888777656678888888889999964
No 73
>2hl0_A Threonyl-tRNA synthetase; translation, editing, aminoacyl-tRNA synthetase, enzyme mechanism, enantioselectivity, ligase; HET: A3S; 1.86A {Pyrococcus abyssi} PDB: 2hkz_A 1y2q_A* 2hl2_A* 3pd2_A* 2hl1_A* 3pd3_A* 3pd4_A* 3pd5_A*
Probab=42.85 E-value=21 Score=25.76 Aligned_cols=23 Identities=26% Similarity=0.202 Sum_probs=19.9
Q ss_pred eeeecCCCcEEeEEEEEEeCCeE
Q psy987 6 VEVCGENGAYYKVIVKMIKGDFH 28 (114)
Q Consensus 6 VEv~g~ngawwkA~Vk~vkgd~~ 28 (114)
+||-..|=||||++--.+||.-.
T Consensus 110 ~eV~raPFGwyK~F~i~ckGHPL 132 (143)
T 2hl0_A 110 FNVGKAPFGYYKAFKISCKGHPL 132 (143)
T ss_dssp CEEEECCSSEEEEEEEEECCCTT
T ss_pred CeEEEeCCccceeEEEEecCccH
Confidence 58888888999999999999753
No 74
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=42.14 E-value=58 Score=22.92 Aligned_cols=29 Identities=14% Similarity=0.189 Sum_probs=24.9
Q ss_pred eeeeecCCCcEEeEEEEEEeCCeEEEEEc
Q psy987 5 EVEVCGENGAYYKVIVKMIKGDFHVVEYL 33 (114)
Q Consensus 5 ~VEv~g~ngawwkA~Vk~vkgd~~vV~f~ 33 (114)
.++..+++|.-..++|+.+.++.++|.|.
T Consensus 90 ~~~~~~~~G~~~~~~V~~v~~~~v~vD~N 118 (158)
T 3cgm_A 90 QFYAQDMEGNPMPLTVVAVEGEEVTVDFN 118 (158)
T ss_dssp EEEEEETTTEEEEEEEEEEETTEEEEECS
T ss_pred EEEEECCCCCEEEEEEEEECCCEEEEeCC
Confidence 56777778877789999999999999985
No 75
>2g3r_A Tumor suppressor P53-binding protein 1; tandem tudor domains, cell cycle-transcription complex; 1.25A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2ig0_A* 3lgf_A* 3lgl_A* 3lh0_A* 1xni_A
Probab=41.46 E-value=54 Score=23.14 Aligned_cols=39 Identities=10% Similarity=0.148 Sum_probs=27.2
Q ss_pred CCCcEEeEEE-EEEeCCeEEEEEccCcce-e--eeeecCcccc
Q psy987 11 ENGAYYKVIV-KMIKGDFHVVEYLGCQST-F--TEIVPPERMR 49 (114)
Q Consensus 11 ~ngawwkA~V-k~vkgd~~vV~f~~w~~~-~--~eiv~~~RLr 49 (114)
+||-||.++| +..+.+-+.|.|...+.. - +.|+--+.||
T Consensus 17 dn~~yYpG~V~~~~~~~ky~V~FdDg~~~~v~~k~iiv~d~ip 59 (123)
T 2g3r_A 17 SNGYFYSGKITRDVGAGKYKLLFDDGYECDVLGKDILLCDPIP 59 (123)
T ss_dssp TTCCEEEEEEEEEEETTEEEEEETTSCEEEEEGGGEECCSSCC
T ss_pred cCCcCcccEEEEeccCCeEEEEEcCCCeeEeecceEEEecccC
Confidence 4778999999 556777799999875432 2 3444456665
No 76
>2dmc_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=40.76 E-value=32 Score=23.00 Aligned_cols=33 Identities=9% Similarity=0.213 Sum_probs=29.3
Q ss_pred CcceeeeecCCCcEEeEEEEEEeCCeEEEEEcc
Q psy987 2 DELEVEVCGENGAYYKVIVKMIKGDFHVVEYLG 34 (114)
Q Consensus 2 ~~l~VEv~g~ngawwkA~Vk~vkgd~~vV~f~~ 34 (114)
.+|+|.|.+..|.=-.+.|++..+..|.|.|.-
T Consensus 45 ~~l~v~v~~PsG~~~~~~v~~~~~g~y~v~ftP 77 (116)
T 2dmc_A 45 SSLTASIKAPSGRDEPCLLKRLPNNHIGISFIP 77 (116)
T ss_dssp TTBCCEEECTTSCBCCEEEEEETTTEEEEEECC
T ss_pred CCEEEEEECCCCCEEeeEEEeCCCCeEEEEEEe
Confidence 478999999888888899999999999999964
No 77
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=39.74 E-value=53 Score=25.12 Aligned_cols=47 Identities=15% Similarity=0.224 Sum_probs=32.5
Q ss_pred eeeec-CCCcEEeEEEEEEeC---------C--eEEEEEccCcceeeeeecCccccCCC
Q psy987 6 VEVCG-ENGAYYKVIVKMIKG---------D--FHVVEYLGCQSTFTEIVPPERMRQKN 52 (114)
Q Consensus 6 VEv~g-~ngawwkA~Vk~vkg---------d--~~vV~f~~w~~~~~eiv~~~RLrp~n 52 (114)
|+.|- .-|||+-|.|..|-. | .|-|.|+.....-..-++..-+||..
T Consensus 9 vd~~d~~~Gawfea~i~~v~~~~~~~~~~~d~~~y~v~y~~~~~~~~~~~~~~~irpra 67 (226)
T 3ask_A 9 VDARDTNMGAWFEAQVVRVTRKAPSRPALEEDVIYHVKYDDYPENGVVQMNSRDVRARA 67 (226)
T ss_dssp EEEECTTTCCEEEEEEEEEEECC------CCCEEEEEEETTCGGGCEEEEEGGGEEECC
T ss_pred EEeeecCCCceeEEEEEEEeccccccCCCCCceEEEeecccCcccCceecccccccccc
Confidence 77887 579999999987753 3 56688887644334445555566664
No 78
>2qqr_A JMJC domain-containing histone demethylation protein 3A; histone lysine demethylase, tandem hybrid tudor domains, metal binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2qqs_A* 2gfa_A* 2gf7_A*
Probab=39.46 E-value=90 Score=21.60 Aligned_cols=27 Identities=22% Similarity=0.343 Sum_probs=21.5
Q ss_pred eecCCCcEEeEEEEEEeC-CeEEEEEcc
Q psy987 8 VCGENGAYYKVIVKMIKG-DFHVVEYLG 34 (114)
Q Consensus 8 v~g~ngawwkA~Vk~vkg-d~~vV~f~~ 34 (114)
..-.||.+|+|+|+.++- .||.|.|..
T Consensus 14 akh~ngryy~~~V~~~~~~~~y~V~F~D 41 (118)
T 2qqr_A 14 SKHKNGRFYQCEVVRLTTETFYEVNFDD 41 (118)
T ss_dssp EECTTSSEEEEEEEEEEEEEEEEEEETT
T ss_pred EECCCCCEEeEEEEEEeeEEEEEEEcCC
Confidence 345699999999987765 589999974
No 79
>2dib_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=38.81 E-value=49 Score=21.89 Aligned_cols=43 Identities=19% Similarity=0.167 Sum_probs=31.3
Q ss_pred CcceeeeecCCCcEEeEEEEEEeCCeEEEEEcc-Ccceeeeeec
Q psy987 2 DELEVEVCGENGAYYKVIVKMIKGDFHVVEYLG-CQSTFTEIVP 44 (114)
Q Consensus 2 ~~l~VEv~g~ngawwkA~Vk~vkgd~~vV~f~~-w~~~~~eiv~ 44 (114)
+.|.|.+.+..|.--.+.|++.+++.|.|.|.- ..-.|+.-|.
T Consensus 57 ~~~~v~i~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~~~i~V~ 100 (128)
T 2dib_A 57 DHIKAHIANPSGASTECFVTDNADGTYQVEYTPFEKGLHVVEVT 100 (128)
T ss_dssp SCCCEECCCSSSCCCCCEEEECSSSEEEEEECCSSCSEEEEEEB
T ss_pred ccEEEEEECCCCCEeeeEEEECCCCEEEEEEEeCCCEeEEEEEE
Confidence 457888888777666778999899999999965 3334444443
No 80
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=38.21 E-value=92 Score=22.31 Aligned_cols=31 Identities=16% Similarity=0.227 Sum_probs=26.7
Q ss_pred ceeeeecCCCcEEeEEEEEEeCCeEEEEEcc
Q psy987 4 LEVEVCGENGAYYKVIVKMIKGDFHVVEYLG 34 (114)
Q Consensus 4 l~VEv~g~ngawwkA~Vk~vkgd~~vV~f~~ 34 (114)
+.++..+++|.-..+.|+.|.++.++|.|.-
T Consensus 117 ~~~~~~~~~G~~~~~~V~~v~~~~V~vD~NH 147 (169)
T 4dt4_A 117 AIMLFTAMDGSEMPGVIREINGDSITVDFNH 147 (169)
T ss_dssp CEEEEECTTSCEEEEEEEEEETTEEEEECSC
T ss_pred cEEEEECCCCCEEEEEEEEEcCCEEEEeCCC
Confidence 4577788888888999999999999999953
No 81
>2dj4_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=36.30 E-value=30 Score=22.46 Aligned_cols=33 Identities=33% Similarity=0.279 Sum_probs=25.0
Q ss_pred CcceeeeecCCCcEEeEEEEEEeCCeEEEEEcc
Q psy987 2 DELEVEVCGENGAYYKVIVKMIKGDFHVVEYLG 34 (114)
Q Consensus 2 ~~l~VEv~g~ngawwkA~Vk~vkgd~~vV~f~~ 34 (114)
+.|.|++.|..|.=-...|++.++..|.|.|.-
T Consensus 43 ~~l~V~i~~p~g~~~~~~v~d~~dGty~v~Y~p 75 (108)
T 2dj4_A 43 APLEVRVLGPRGLVEPVNVVDNGDGTHTVTYTP 75 (108)
T ss_dssp CCEEEEEECSSSCEECCCCEECSSSEEEEEECC
T ss_pred ceEEEEEECCCCCEeeeEEEECCCCEEEEEEEe
Confidence 457888888777555567788888888888864
No 82
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=36.18 E-value=52 Score=25.19 Aligned_cols=42 Identities=19% Similarity=0.196 Sum_probs=27.3
Q ss_pred eeeeecCCCcEEeEEEEEEeCC-----eEEEEEccCcceeeeeecCcc
Q psy987 5 EVEVCGENGAYYKVIVKMIKGD-----FHVVEYLGCQSTFTEIVPPER 47 (114)
Q Consensus 5 ~VEv~g~ngawwkA~Vk~vkgd-----~~vV~f~~w~~~~~eiv~~~R 47 (114)
.|+|.|+=-. |...+.|.|.+ .+++.-....-.|+++|.-.-
T Consensus 183 ~V~v~GsF~~-W~~~~~l~k~~~~g~~~~~~~L~~G~y~YkFiVDG~w 229 (294)
T 3nme_A 183 RVEISGLDIG-WGQRIPLTLGKGTGFWILKRELPEGQFEYKYIIDGEW 229 (294)
T ss_dssp CEEEEETTTE-EEEEEECEECTTTCEEEEEEEECSEEEEEEEEETTEE
T ss_pred EEEEEEeccC-CCCcccceEcCCCCEEEEEEECCCceEEEEEEECCEE
Confidence 5899998223 56788888843 334443435567888888643
No 83
>2dmb_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=35.95 E-value=29 Score=23.42 Aligned_cols=33 Identities=12% Similarity=0.023 Sum_probs=26.6
Q ss_pred CcceeeeecCCCcEEeEEEEEEeCCeEEEEEcc
Q psy987 2 DELEVEVCGENGAYYKVIVKMIKGDFHVVEYLG 34 (114)
Q Consensus 2 ~~l~VEv~g~ngawwkA~Vk~vkgd~~vV~f~~ 34 (114)
+.|.|++.+..|.=-.+.|++-++..|.|.|.-
T Consensus 43 ~~l~V~I~~p~g~~v~~~v~d~~dGty~V~Y~p 75 (124)
T 2dmb_A 43 GKVTCTVLTPDGTEAEADVIENEDGTYDIFYTA 75 (124)
T ss_dssp CCEEEEEECTTSCBCCCEEEECTTSCEEEEEEC
T ss_pred CcEEEEEECCCCCEEeeEEEeCCCCEEEEEEEc
Confidence 468899988777656678899888899999965
No 84
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=35.78 E-value=1e+02 Score=21.93 Aligned_cols=43 Identities=16% Similarity=0.092 Sum_probs=33.4
Q ss_pred CcceeeeecCCCcEEeEEEEEEeCCeEEEEEcc-CcceeeeeecC
Q psy987 2 DELEVEVCGENGAYYKVIVKMIKGDFHVVEYLG-CQSTFTEIVPP 45 (114)
Q Consensus 2 ~~l~VEv~g~ngawwkA~Vk~vkgd~~vV~f~~-w~~~~~eiv~~ 45 (114)
+.|.|.+.|..| =-.+.|++.++..|.|.|.- |.-.|+.-|..
T Consensus 135 ~~l~v~i~~p~g-~~~~~v~d~~dGty~v~y~p~~~G~y~v~V~~ 178 (212)
T 1qfh_A 135 DKFEVSITGPAE-EITLDAIDNQDGTYTAAYSLVGNGRFSTGVKL 178 (212)
T ss_dssp CCEEEEEEECCS-EEEEEEEECSSSEEEEEEEEESSEEEEEEEEE
T ss_pred CcEEEEEECCCC-ceeeEEEECCCCEEEEEEEcCCCEEEEEEEEE
Confidence 468888988777 45677889999999999987 77777665554
No 85
>3d0f_A Penicillin-binding 1 transmembrane protein MRCA; BIG_1156.2, STR genomics, PSI-2, protein structure initiative; 1.64A {Nitrosomonas europaea atcc 19718}
Probab=35.06 E-value=50 Score=21.37 Aligned_cols=26 Identities=8% Similarity=-0.093 Sum_probs=22.4
Q ss_pred cCCCcEEeEEEEEEeCCeEEEEEccC
Q psy987 10 GENGAYYKVIVKMIKGDFHVVEYLGC 35 (114)
Q Consensus 10 g~ngawwkA~Vk~vkgd~~vV~f~~w 35 (114)
...|.|+.|.|+.+.+..+.|.+.+.
T Consensus 31 ~~~~~~~~AvV~~v~~~~~~v~~~~g 56 (106)
T 3d0f_A 31 GNSDDILAAVVLSATPGAVEAFRKNG 56 (106)
T ss_dssp CTTTTCEEEEEEEEETTEEEEEETTS
T ss_pred CccCCeEEEEEEEeCCCeEEEEEcCC
Confidence 34578999999999999999998764
No 86
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=32.62 E-value=1.2e+02 Score=20.86 Aligned_cols=47 Identities=17% Similarity=0.136 Sum_probs=32.0
Q ss_pred ceeeeecCCCcEEeEEEEEEeCCeEEEEEcc--CcceeeeeecCccccC
Q psy987 4 LEVEVCGENGAYYKVIVKMIKGDFHVVEYLG--CQSTFTEIVPPERMRQ 50 (114)
Q Consensus 4 l~VEv~g~ngawwkA~Vk~vkgd~~vV~f~~--w~~~~~eiv~~~RLrp 50 (114)
+.++..+++|.-..++|+.+.++.++|.|.- -..+.++-+....+|+
T Consensus 98 ~~~~~~~~~G~~~~~~V~~v~~~~v~vD~NHPLAG~~L~F~v~v~~v~~ 146 (151)
T 2kr7_A 98 MSVFGQTEDNQTIQAIIKDFSATHVMVDYNHPLAGKTLAFRFKVLGFRE 146 (151)
T ss_dssp CEEEEEETTTEEEEEEEEEECSSEEEEEECCTTSCCCEEEEEEEEEEEC
T ss_pred CEEEEECCCCCEEEEEEEEECCCEEEEECCCcCCCCEEEEEEEEEEeec
Confidence 3566777788778899999999999999954 2223444444444443
No 87
>2xdp_A Lysine-specific demethylase 4C; oxidoreductase, histone modification; 1.56A {Homo sapiens}
Probab=32.31 E-value=38 Score=23.70 Aligned_cols=39 Identities=26% Similarity=0.391 Sum_probs=25.8
Q ss_pred cCCCcEEeEEEEEEe-CCeEEEEEcc--Cc-cee-eeeecCccc
Q psy987 10 GENGAYYKVIVKMIK-GDFHVVEYLG--CQ-STF-TEIVPPERM 48 (114)
Q Consensus 10 g~ngawwkA~Vk~vk-gd~~vV~f~~--w~-~~~-~eiv~~~RL 48 (114)
-.||.||+|+|+.++ ..||.|.|.. |- ..+ .+|++.+=+
T Consensus 17 ~~ngryy~~~V~~~~~~~~y~V~F~DgS~s~dl~PedIvs~dc~ 60 (123)
T 2xdp_A 17 HRNTRYYSCRVMAVTSQTFYEVMFDDGSFSRDTFPEDIVSRDCL 60 (123)
T ss_dssp CCCCCCCCCEEEEEEEEEEEEEEETTSCEEEEECGGGBCSSCHH
T ss_pred CCCCcEEeEEEEEEeeEEEEEEEcCCCCccCCCCHhHccccccc
Confidence 348999999997775 4599999974 22 111 236666644
No 88
>3f70_A Lethal(3)malignant brain tumor-like 2 protein; MBT, chromatin regulator, metal-binding, nucleus, transcript transcription regulation, zinc-finger; HET: MLZ; 2.10A {Homo sapiens} PDB: 3dbb_A* 3cey_A
Probab=31.36 E-value=64 Score=26.89 Aligned_cols=40 Identities=15% Similarity=0.075 Sum_probs=28.3
Q ss_pred ceeeee--cCCCcEEeEEEEEEeCCeEEEEEccCcceeeeee
Q psy987 4 LEVEVC--GENGAYYKVIVKMIKGDFHVVEYLGCQSTFTEIV 43 (114)
Q Consensus 4 l~VEv~--g~ngawwkA~Vk~vkgd~~vV~f~~w~~~~~eiv 43 (114)
+-+|+. -.++..|.|.|..+-|+-+.+.|++|+..+..-.
T Consensus 158 mkLE~vD~~~~~~~~vAtV~~v~g~rl~l~~~~~~~~~dfWc 199 (456)
T 3f70_A 158 MRLEVVDKSQVSRTRMAVVDTVIGGRLRLLYEDGDSDDDFWC 199 (456)
T ss_dssp CEEEEECTTCTTCEEEEEEEEEETTEEEEEECC----CCEEE
T ss_pred CEEEEECCCCCcceEEEEEEEEECCEEEEEEcCCCCCCceEE
Confidence 445554 4478899999999999999999999986554433
No 89
>2w0p_A Filamin-A; alternative splicing, cytoskeleton/complex, phosphoprotein, disease mutation, immunoglobulin like, zinc, complex; 1.90A {Homo sapiens} SCOP: b.1.18.10 PDB: 2brq_A* 2jf1_A 3isw_A
Probab=31.17 E-value=67 Score=20.12 Aligned_cols=31 Identities=23% Similarity=0.167 Sum_probs=24.3
Q ss_pred CcceeeeecCCCcEEeEEEEEEeCCeEEEEEcc
Q psy987 2 DELEVEVCGENGAYYKVIVKMIKGDFHVVEYLG 34 (114)
Q Consensus 2 ~~l~VEv~g~ngawwkA~Vk~vkgd~~vV~f~~ 34 (114)
..|.|.|.|..+.+ ..|++.++..|.|.|.-
T Consensus 34 ~~~~v~v~gp~~~~--~~v~d~~dGty~v~Y~p 64 (94)
T 2w0p_A 34 GGLAIAVEGPSKAE--ISFEDRKDGSCGVAYVV 64 (94)
T ss_dssp CCEEEEEEESSCCE--EEEEECTTSCEEEEEEC
T ss_pred CcEEEEEECCCCCe--EEEEECCCCEEEEEEEE
Confidence 35788888887764 46889999999999965
No 90
>2di9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=30.50 E-value=75 Score=21.36 Aligned_cols=31 Identities=26% Similarity=0.183 Sum_probs=24.5
Q ss_pred CcceeeeecCCCcEEeEEEEEEeCCeEEEEEcc
Q psy987 2 DELEVEVCGENGAYYKVIVKMIKGDFHVVEYLG 34 (114)
Q Consensus 2 ~~l~VEv~g~ngawwkA~Vk~vkgd~~vV~f~~ 34 (114)
+.|.|++.|..++ ...+++.++..|.|.|.-
T Consensus 62 ~~l~v~v~gp~~~--~~~v~d~~dGty~v~Y~p 92 (131)
T 2di9_A 62 GGLGLTVEGPCEA--KIECSDNGDGTCSVSYLP 92 (131)
T ss_dssp SCEEEEECSSSCC--EEEEEECSSSEEEEEEEC
T ss_pred CeeEEEEEecCCc--eEEEEECCCCEEEEEEEe
Confidence 4678888887775 457889999999999964
No 91
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=30.45 E-value=85 Score=22.37 Aligned_cols=29 Identities=17% Similarity=0.206 Sum_probs=23.9
Q ss_pred ceeeeecCCCcEEeEEEEEEeCCeEEEEEc
Q psy987 4 LEVEVCGENGAYYKVIVKMIKGDFHVVEYL 33 (114)
Q Consensus 4 l~VEv~g~ngawwkA~Vk~vkgd~~vV~f~ 33 (114)
+.++..+.+|. ..++|+.|.++.++|.|.
T Consensus 94 ~~~~~~~~~G~-~~~~V~~v~~~~V~vD~N 122 (171)
T 2k8i_A 94 MRFLAETDQGP-VPVEITAVEDDHVVVDGN 122 (171)
T ss_dssp CEEEEEETTEE-EEEEEEEECSSEEEEESC
T ss_pred cEEEEECCCCc-EEEEEEEEcCCEEEEeCC
Confidence 35666677776 789999999999999985
No 92
>3h6z_A Polycomb protein SFMBT; MBT, MBR repeat, aromatic CAGE, chromatin regulator, DNA-BIN metal-binding, nucleus, repressor, transcription; HET: MLZ SUC; 2.80A {Drosophila melanogaster}
Probab=30.41 E-value=71 Score=26.55 Aligned_cols=42 Identities=14% Similarity=0.215 Sum_probs=31.0
Q ss_pred CCCcEEeEEEEEEeCCeEEEEEccCcc---eeeeeecCccccCCC
Q psy987 11 ENGAYYKVIVKMIKGDFHVVEYLGCQS---TFTEIVPPERMRQKN 52 (114)
Q Consensus 11 ~ngawwkA~Vk~vkgd~~vV~f~~w~~---~~~eiv~~~RLrp~n 52 (114)
.+..+|.|.|..+-|--+...|++.+. .+=--+...+|.|..
T Consensus 61 ~p~~~WvAtV~~~~G~rLlLry~G~~~d~~DFW~~~~S~~ihPvG 105 (447)
T 3h6z_A 61 TPTSFWVATILEIKGYKALMSYEGFDTDSHDFWVNLCNAEVHSVG 105 (447)
T ss_dssp --CCBEEEEEEEEETTEEEEEETTCSSGGGCEEEETTTSSCBCTT
T ss_pred CCCcEEEEEEhhhcccEEEEEEccCCCCCCCccccCCCCceecCc
Confidence 467899999999999999999999763 233344556677764
No 93
>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A
Probab=29.90 E-value=40 Score=19.24 Aligned_cols=15 Identities=13% Similarity=0.463 Sum_probs=10.1
Q ss_pred eeeecCCCcEEeEEE
Q psy987 6 VEVCGENGAYYKVIV 20 (114)
Q Consensus 6 VEv~g~ngawwkA~V 20 (114)
|+|-...++||++.-
T Consensus 31 i~v~~~~~~Ww~g~~ 45 (62)
T 2iim_A 31 LRILEQSGEWWKAQS 45 (62)
T ss_dssp EEEEECCSSEEEEEE
T ss_pred EEEEEcCCCEEEEEE
Confidence 455555568999974
No 94
>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A
Probab=28.71 E-value=43 Score=19.20 Aligned_cols=15 Identities=27% Similarity=0.457 Sum_probs=9.9
Q ss_pred eeeecC-CCcEEeEEE
Q psy987 6 VEVCGE-NGAYYKVIV 20 (114)
Q Consensus 6 VEv~g~-ngawwkA~V 20 (114)
+.|-.. +++||+|.+
T Consensus 46 i~v~~~~~~~Ww~g~~ 61 (62)
T 1g2b_A 46 LTLLNSTNKDWWKVEV 61 (62)
T ss_dssp EEEEECCSSSEEEEEE
T ss_pred EEEEEecCCCEEEEEe
Confidence 344433 788999975
No 95
>2d7p_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 PDB: 2eeb_A
Probab=28.57 E-value=32 Score=22.86 Aligned_cols=32 Identities=19% Similarity=0.351 Sum_probs=25.6
Q ss_pred cceeeeecCCCcEEeEEEEEEeCCeEEEEEcc
Q psy987 3 ELEVEVCGENGAYYKVIVKMIKGDFHVVEYLG 34 (114)
Q Consensus 3 ~l~VEv~g~ngawwkA~Vk~vkgd~~vV~f~~ 34 (114)
+|.|+|.+..|.=-.+.|++..++.|.|.|.-
T Consensus 42 ~l~v~V~~P~g~~~~~~v~d~~~gty~v~ytP 73 (112)
T 2d7p_A 42 VIDARVHTPSGAVEECYVSELDSDKHTIRFIP 73 (112)
T ss_dssp CEEEEEECSSSCBCCCEECSCBTTEEEEEECC
T ss_pred CEEEEEECCCCCeeeeEEEeCCCCeEEEEEEc
Confidence 57888888777666778888888889998864
No 96
>2eea_A Filamin-B; beta-sandwich, immunoglobulin-like fold, interaction with GP1BA, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.85 E-value=40 Score=22.10 Aligned_cols=31 Identities=23% Similarity=0.220 Sum_probs=23.2
Q ss_pred CcceeeeecCCCcEEeEEEEEEeCCeEEEEEcc
Q psy987 2 DELEVEVCGENGAYYKVIVKMIKGDFHVVEYLG 34 (114)
Q Consensus 2 ~~l~VEv~g~ngawwkA~Vk~vkgd~~vV~f~~ 34 (114)
+.|.|++.|..+.+ ..|++.++..|.|.|.-
T Consensus 52 ~~l~v~v~~p~~~~--~~v~d~~dGty~v~Y~p 82 (115)
T 2eea_A 52 GGLDLAIEGPSKAE--ISCIDNKDGTCTVTYLP 82 (115)
T ss_dssp SCEEEEEESSSCCE--ECCBCCSSSEEEEEEEC
T ss_pred CceEEEEECCCCce--EEEEECCCCEEEEEEEe
Confidence 35788888887763 36788888888888854
No 97
>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A
Probab=27.41 E-value=25 Score=20.22 Aligned_cols=10 Identities=0% Similarity=0.116 Sum_probs=7.9
Q ss_pred CCCcEEeEEE
Q psy987 11 ENGAYYKVIV 20 (114)
Q Consensus 11 ~ngawwkA~V 20 (114)
.+++||.|..
T Consensus 33 ~~~~Ww~g~~ 42 (62)
T 2j6f_A 33 QEEGWLEGEL 42 (62)
T ss_dssp SSTTEEEEEE
T ss_pred CCCCEEEEEE
Confidence 3678999985
No 98
>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A
Probab=27.31 E-value=56 Score=18.41 Aligned_cols=11 Identities=18% Similarity=0.431 Sum_probs=8.5
Q ss_pred cCCCcEEeEEE
Q psy987 10 GENGAYYKVIV 20 (114)
Q Consensus 10 g~ngawwkA~V 20 (114)
..++.||.+..
T Consensus 36 ~~~~~W~~~~~ 46 (63)
T 3eg3_A 36 NHNGEWCEAQT 46 (63)
T ss_dssp CTTSSEEEEEE
T ss_pred CCCCCeEEEEE
Confidence 34678999987
No 99
>2ee6_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.96 E-value=35 Score=22.01 Aligned_cols=31 Identities=23% Similarity=0.192 Sum_probs=22.4
Q ss_pred CcceeeeecCCCcEEeEEEEEEeCCeEEEEEcc
Q psy987 2 DELEVEVCGENGAYYKVIVKMIKGDFHVVEYLG 34 (114)
Q Consensus 2 ~~l~VEv~g~ngawwkA~Vk~vkgd~~vV~f~~ 34 (114)
+.|.|++.|..+.+- .|++.++..|.|.|.-
T Consensus 42 ~~l~v~v~~p~~~~v--~v~d~~dGty~v~Y~p 72 (105)
T 2ee6_A 42 GGLSIAVEGPSKAEI--TFDDHKNGSCGVSYIA 72 (105)
T ss_dssp CCEEEEEESSSCEEE--EECCCCSSCCCEEEEE
T ss_pred CcEEEEEECCCCCEE--EEEECCCCEEEEEEEE
Confidence 357788888777644 6778888888888854
No 100
>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae}
Probab=26.86 E-value=49 Score=19.38 Aligned_cols=15 Identities=20% Similarity=0.410 Sum_probs=10.9
Q ss_pred eeeecCCCcEEeEEE
Q psy987 6 VEVCGENGAYYKVIV 20 (114)
Q Consensus 6 VEv~g~ngawwkA~V 20 (114)
|+|-..+.+||.|..
T Consensus 32 i~v~~~~~~Ww~g~~ 46 (70)
T 2vkn_A 32 LQVSDIEGRWWKARR 46 (70)
T ss_dssp EEEECTTSSEEEEEC
T ss_pred EEEEEcCCCeEEEEE
Confidence 456666788999963
No 101
>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens}
Probab=26.86 E-value=45 Score=20.60 Aligned_cols=15 Identities=7% Similarity=0.240 Sum_probs=10.8
Q ss_pred eeeecCCCcEEeEEE
Q psy987 6 VEVCGENGAYYKVIV 20 (114)
Q Consensus 6 VEv~g~ngawwkA~V 20 (114)
|+|-..+++||.|..
T Consensus 56 i~v~~~~~~Ww~g~~ 70 (86)
T 2jxb_A 56 LWLLDDSKTWWRVRN 70 (86)
T ss_dssp EEEEECCSSEEEEEC
T ss_pred EEEEecCCCeEEEEE
Confidence 456556778999973
No 102
>3fke_A Polymerase cofactor VP35; RNA binding domain, coiled coil, interferon antiviral system evasion, RNA replication, RNA-binding; 1.40A {Zaire ebolavirus - mayinga} PDB: 3l25_A 3l26_A 3l28_A 3l27_A 3l29_A 3l2a_A
Probab=26.58 E-value=34 Score=24.23 Aligned_cols=23 Identities=22% Similarity=0.388 Sum_probs=19.4
Q ss_pred ccccCCCCCCCCCCCceEEEEEc
Q psy987 46 ERMRQKNTNPPIDAKTFHKFDIE 68 (114)
Q Consensus 46 ~RLrp~n~n~pm~K~~F~~ie~~ 68 (114)
.||||+++|+++.||=-|....+
T Consensus 98 ksLR~vPp~Pki~rGWVciy~~~ 120 (129)
T 3fke_A 98 KSLRPVPPSPKIDRGWVCVFQLQ 120 (129)
T ss_dssp GGEECCCSSCCGGGTEEEEEEET
T ss_pred hccCCCCCCCccCcceEEEEEcc
Confidence 58999999999999988876554
No 103
>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A
Probab=26.16 E-value=79 Score=17.85 Aligned_cols=11 Identities=45% Similarity=0.715 Sum_probs=8.9
Q ss_pred CCcEEeEEEEE
Q psy987 12 NGAYYKVIVKM 22 (114)
Q Consensus 12 ngawwkA~Vk~ 22 (114)
+.+||.|....
T Consensus 33 ~~~Ww~g~~~~ 43 (65)
T 2oaw_A 33 NKDWWKVEVKI 43 (65)
T ss_dssp SSSEEEEEEEE
T ss_pred CCCEEEEEEcc
Confidence 67899998873
No 104
>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A
Probab=26.12 E-value=33 Score=20.54 Aligned_cols=15 Identities=7% Similarity=0.229 Sum_probs=10.3
Q ss_pred eeeecC---CCcEEeEEE
Q psy987 6 VEVCGE---NGAYYKVIV 20 (114)
Q Consensus 6 VEv~g~---ngawwkA~V 20 (114)
|+|-.. +.+||.|..
T Consensus 27 i~vl~~~~~~~gWw~g~~ 44 (69)
T 2ydl_A 27 VTLINKDCIDVGWWEGEL 44 (69)
T ss_dssp EEEEESCCSSTTEEEEEE
T ss_pred EEEEEcCCCCCCEEEEEE
Confidence 455444 677999985
No 105
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=26.07 E-value=85 Score=22.26 Aligned_cols=33 Identities=21% Similarity=0.125 Sum_probs=29.1
Q ss_pred CcceeeeecCCCcEEeEEEEEEeCCeEEEEEcc
Q psy987 2 DELEVEVCGENGAYYKVIVKMIKGDFHVVEYLG 34 (114)
Q Consensus 2 ~~l~VEv~g~ngawwkA~Vk~vkgd~~vV~f~~ 34 (114)
.+++++|.+..|.=-.+.|++-+++.|.|.|.-
T Consensus 34 ~~v~~~v~~PsG~~~~~~v~d~~dgty~v~y~P 66 (188)
T 2k7p_A 34 GEITGEVRMPSGKVAQPTITDNKDGTVTVRYAP 66 (188)
T ss_dssp SCEEEEEECTTSCEECCEEEECSSSEEEEEECC
T ss_pred ceEEEEEECCCCCccccEEEeCCCCEEEEEEEc
Confidence 578999999999888889999889999999965
No 106
>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A
Probab=25.85 E-value=59 Score=18.90 Aligned_cols=17 Identities=18% Similarity=0.198 Sum_probs=11.2
Q ss_pred eeeec-CCCcEEeEEEEE
Q psy987 6 VEVCG-ENGAYYKVIVKM 22 (114)
Q Consensus 6 VEv~g-~ngawwkA~Vk~ 22 (114)
++|-. .+.+||.|....
T Consensus 32 i~v~~~~~~~Ww~g~~~~ 49 (68)
T 1tg0_A 32 IIVTSVEDAEWYFGEYQD 49 (68)
T ss_dssp EEEEEECSSSEEEEEEEC
T ss_pred EEEEEecCCCeEEEEECC
Confidence 34433 466799998764
No 107
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=25.28 E-value=1.7e+02 Score=21.80 Aligned_cols=44 Identities=16% Similarity=0.097 Sum_probs=34.0
Q ss_pred CcceeeeecCCCcEEeEEEEEEeCCeEEEEEcc-CcceeeeeecCc
Q psy987 2 DELEVEVCGENGAYYKVIVKMIKGDFHVVEYLG-CQSTFTEIVPPE 46 (114)
Q Consensus 2 ~~l~VEv~g~ngawwkA~Vk~vkgd~~vV~f~~-w~~~~~eiv~~~ 46 (114)
+.|.|.+.|..| =-.+.|++.++..|.|.|.- |.-+|+.-+...
T Consensus 234 ~~l~v~i~~p~g-~~~~~v~d~~~G~y~v~y~p~~~G~y~i~V~~~ 278 (311)
T 1wlh_A 234 DKFEVSITGPAE-EITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLN 278 (311)
T ss_dssp SCEEEEEESCCS-EEEEEEEECSSSEEEEEEEEECSEEEEEEEEET
T ss_pred CcEEEEEECCCC-CceeEEEECCCCEEEEEEECCCCEeEEEEEEEC
Confidence 457888888877 56678889999999999987 776676665543
No 108
>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=24.98 E-value=30 Score=21.71 Aligned_cols=16 Identities=6% Similarity=0.079 Sum_probs=10.5
Q ss_pred eeeecC---CCcEEeEEEE
Q psy987 6 VEVCGE---NGAYYKVIVK 21 (114)
Q Consensus 6 VEv~g~---ngawwkA~Vk 21 (114)
|+|-.. +.+||.|...
T Consensus 30 i~v~~~~~~~~gWw~g~~~ 48 (93)
T 1uff_A 30 IQVDEKTVGEPGWLYGSFQ 48 (93)
T ss_dssp EEECSSCCCSSSEEEEEET
T ss_pred EEEeEccCCCCCEEEEEEC
Confidence 455443 5679999843
No 109
>3feo_A MBT domain-containing protein 1; MBTL1, structural genomics, structural genomics consortium, metal-binding, nucleus, zinc-finger; 2.50A {Homo sapiens}
Probab=24.64 E-value=1.4e+02 Score=24.56 Aligned_cols=50 Identities=14% Similarity=0.214 Sum_probs=35.0
Q ss_pred cceeeeecCC-----CcEEeEEEEEEeCCeEEEEEccCcc----eeeeeecCccccCCC
Q psy987 3 ELEVEVCGEN-----GAYYKVIVKMIKGDFHVVEYLGCQS----TFTEIVPPERMRQKN 52 (114)
Q Consensus 3 ~l~VEv~g~n-----gawwkA~Vk~vkgd~~vV~f~~w~~----~~~eiv~~~RLrp~n 52 (114)
.+-|||.-.. ..||.|.|.++-|--+...|++.+. .+=--+....|.|.-
T Consensus 46 GmklEv~~~~~~~~~~~yWvA~V~~~~G~rllLry~G~~~d~~~DFW~~~~s~~ihpvG 104 (437)
T 3feo_A 46 NVRVEVPNTDCSLPTKVFWIAGIVKLAGYNALLRYEGFENDSGLDFWCNICGSDIHPVG 104 (437)
T ss_dssp TCEEEEECSCC----CCEEEEEEEEEETTEEEEEETTCTTCCTTCEEEETTSTTCEETT
T ss_pred CCEEEEecCCCCCCcCceEEEEEeeecceEEEEEecccCCCCCCCcceeCCCccccccc
Confidence 4567777443 4899999999999999999999643 233334444555553
No 110
>2dic_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=23.97 E-value=80 Score=20.26 Aligned_cols=30 Identities=20% Similarity=0.215 Sum_probs=22.2
Q ss_pred cceeeeecCCCcEEeEEEEEEeCCeEEEEEcc
Q psy987 3 ELEVEVCGENGAYYKVIVKMIKGDFHVVEYLG 34 (114)
Q Consensus 3 ~l~VEv~g~ngawwkA~Vk~vkgd~~vV~f~~ 34 (114)
.|.|.|.|..+.+ ..+++.++..|.|.|.-
T Consensus 43 ~l~v~v~gp~~~~--~~v~d~~dGty~v~Y~p 72 (105)
T 2dic_A 43 GLGITVEGPSESK--INCRDNKDGSCSAEYIP 72 (105)
T ss_dssp CEEEEEESSSCCC--CEEEECSSSCEEEEECC
T ss_pred ceEEEEECCCCCe--EEEEECCCCeEEEEEEe
Confidence 5778888877663 45788888888888854
No 111
>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A
Probab=23.64 E-value=58 Score=19.05 Aligned_cols=15 Identities=27% Similarity=0.425 Sum_probs=10.6
Q ss_pred eeeecCCCcEEeEEE
Q psy987 6 VEVCGENGAYYKVIV 20 (114)
Q Consensus 6 VEv~g~ngawwkA~V 20 (114)
|+|-..+++||++..
T Consensus 33 i~v~~~~~~Ww~~~~ 47 (68)
T 2k2m_A 33 LEVLDDSRKWWKVRD 47 (68)
T ss_dssp EEEEECSSSEEEEEC
T ss_pred EEEEEcCCCeEEEEe
Confidence 455555678999965
No 112
>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}
Probab=23.51 E-value=39 Score=19.97 Aligned_cols=15 Identities=7% Similarity=0.229 Sum_probs=10.2
Q ss_pred eeeecC---CCcEEeEEE
Q psy987 6 VEVCGE---NGAYYKVIV 20 (114)
Q Consensus 6 VEv~g~---ngawwkA~V 20 (114)
|.|-.. +.+||.|..
T Consensus 34 i~v~~~~~~~~~W~~g~~ 51 (73)
T 2k9g_A 34 VTLINKDCIDVGWWEGEL 51 (73)
T ss_dssp EEEEECCSSSTTEEEEEE
T ss_pred EEEEECCCCCCCEEEEEE
Confidence 445443 678999985
No 113
>3qoq_A Alginate and motility regulator Z; protein-DNA complex, ribbon-helix-helix; HET: DNA; 3.10A {Pseudomonas aeruginosa}
Probab=23.28 E-value=52 Score=20.74 Aligned_cols=25 Identities=24% Similarity=0.416 Sum_probs=18.3
Q ss_pred CCCCCCCCceeEEEecCchhHHHhh
Q psy987 85 TNPPIDAKTFHKFDIEVPLDVQELG 109 (114)
Q Consensus 85 ~n~pi~~~~f~k~~~~vpedlre~~ 109 (114)
-+|.-+..+--||+|.+|++|++.-
T Consensus 10 ~~~~~~sr~~~kf~LRlP~eL~~~L 34 (69)
T 3qoq_A 10 ATPTYSSRTADKFVVRLPEGMREQI 34 (69)
T ss_dssp ---CCCTTTSEEEEEECCTTHHHHH
T ss_pred cCCCcccccCCceEEECCHHHHHHH
Confidence 3466777778899999999998753
No 114
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=22.98 E-value=1.9e+02 Score=20.41 Aligned_cols=41 Identities=17% Similarity=0.243 Sum_probs=28.9
Q ss_pred CcceeeeecCCCcEEeEEEEEEeCCeEEEEEcc-Ccceeeeeec
Q psy987 2 DELEVEVCGENGAYYKVIVKMIKGDFHVVEYLG-CQSTFTEIVP 44 (114)
Q Consensus 2 ~~l~VEv~g~ngawwkA~Vk~vkgd~~vV~f~~-w~~~~~eiv~ 44 (114)
..|.|++.|..++ ...+++.++..|.|.|.- +.-.|..-+.
T Consensus 128 g~l~v~I~gp~~~--~~~~~d~~dGty~v~Y~p~~~G~y~i~V~ 169 (188)
T 2k7p_A 128 GGLSLAIEGPSKA--EISCTDNQDGTCSVSYLPVLPGDYSILVK 169 (188)
T ss_dssp SCEEEEEECSSCC--EEEEEECTTSEEEEEEECCSSEEEEEEEE
T ss_pred CCeEEEEeCCCCC--eEEEEECCCCEEEEEEEeCCCEEEEEEEE
Confidence 4678899887763 345889899999999976 4445544443
No 115
>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A
Probab=22.90 E-value=47 Score=18.87 Aligned_cols=10 Identities=10% Similarity=0.365 Sum_probs=7.9
Q ss_pred CCcEEeEEEE
Q psy987 12 NGAYYKVIVK 21 (114)
Q Consensus 12 ngawwkA~Vk 21 (114)
+.+||.|...
T Consensus 35 ~~~W~~g~~~ 44 (61)
T 1y0m_A 35 DGGWWRGDYG 44 (61)
T ss_dssp SSSEEEEEET
T ss_pred CCCEEEEEEC
Confidence 6679999764
No 116
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=22.64 E-value=1.5e+02 Score=21.07 Aligned_cols=42 Identities=21% Similarity=0.226 Sum_probs=30.8
Q ss_pred CcceeeeecCCCcEEeEEEEEEeCCeEEEEEcc-Ccceeeeee
Q psy987 2 DELEVEVCGENGAYYKVIVKMIKGDFHVVEYLG-CQSTFTEIV 43 (114)
Q Consensus 2 ~~l~VEv~g~ngawwkA~Vk~vkgd~~vV~f~~-w~~~~~eiv 43 (114)
+.+.|.+.+..|.=-.+.|++..+..|.|.|.- +.-.|+.-|
T Consensus 44 ~~~~v~i~~p~g~~~~~~v~d~~dGty~v~y~p~~~G~~~i~V 86 (212)
T 1qfh_A 44 DPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNV 86 (212)
T ss_dssp CCEEEEEECGGGCEECCEEEECSSSEEEEEECCCSSEEEEEEE
T ss_pred CeEEEEEECCCCCEeeeEEEECCCcEEEEEEECcCcEEEEEEE
Confidence 357888888777667778999888899999976 443444433
No 117
>2l89_A PWWP domain-containing protein 1; histone binding, protein binding; NMR {Schizosaccharomyces pombe}
Probab=22.06 E-value=95 Score=20.47 Aligned_cols=37 Identities=8% Similarity=0.110 Sum_probs=22.7
Q ss_pred cEEeEEEEE---E---------eCCeEEEEEccCcceeeeeecCccccCCC
Q psy987 14 AYYKVIVKM---I---------KGDFHVVEYLGCQSTFTEIVPPERMRQKN 52 (114)
Q Consensus 14 awwkA~Vk~---v---------kgd~~vV~f~~w~~~~~eiv~~~RLrp~n 52 (114)
-||.|.|-+ + ++..+.|.|-+ +.+| -=+...+|.|-.
T Consensus 20 P~WPa~V~~~~~~p~~v~~~~~~~~~~~V~FFg-~~~~-aWv~~~~l~p~~ 68 (108)
T 2l89_A 20 PWWPALLLRRKETKDSLNTNSSFNVLYKVLFFP-DFNF-AWVKRNSVKPLL 68 (108)
T ss_dssp CEEEEEEEEEEEEESSSCSSSCEEEEEEEEETT-TTEE-EEECGGGEEECC
T ss_pred CCCceEecCcccCcHHHhhccCCCCeEEEEECC-CCCE-EEEchhhceeCC
Confidence 399999954 2 24567788875 3444 334555666654
No 118
>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1
Probab=21.97 E-value=65 Score=18.82 Aligned_cols=9 Identities=22% Similarity=0.541 Sum_probs=7.5
Q ss_pred CCCcEEeEE
Q psy987 11 ENGAYYKVI 19 (114)
Q Consensus 11 ~ngawwkA~ 19 (114)
++.+||.|.
T Consensus 43 ~~~~Ww~g~ 51 (71)
T 1csk_A 43 KDPNWYKAK 51 (71)
T ss_dssp SSTTEEEEE
T ss_pred CCCCCEEEE
Confidence 567799998
No 119
>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A
Probab=21.86 E-value=50 Score=18.66 Aligned_cols=15 Identities=20% Similarity=0.425 Sum_probs=10.3
Q ss_pred eeeecCCCcEEeEEE
Q psy987 6 VEVCGENGAYYKVIV 20 (114)
Q Consensus 6 VEv~g~ngawwkA~V 20 (114)
|+|-..+.+||.+.-
T Consensus 26 i~v~~~~~~Ww~~~~ 40 (60)
T 1i07_A 26 LEILDDRRQWWKVRN 40 (60)
T ss_dssp EEECGGGCCEEEEEC
T ss_pred EEEEEcCCCeEEEEE
Confidence 455555778999863
No 120
>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.76 E-value=42 Score=20.40 Aligned_cols=15 Identities=27% Similarity=0.669 Sum_probs=10.2
Q ss_pred eeeecCCCcEEeEEE
Q psy987 6 VEVCGENGAYYKVIV 20 (114)
Q Consensus 6 VEv~g~ngawwkA~V 20 (114)
++|-.++++||++..
T Consensus 42 i~v~~~~~~Ww~~~~ 56 (79)
T 2cud_A 42 LRVISDEGGWWKAIS 56 (79)
T ss_dssp EEEEEEETTEEEEEE
T ss_pred EEEEecCCCeEEEEE
Confidence 344445678999975
No 121
>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A
Probab=21.46 E-value=80 Score=17.69 Aligned_cols=9 Identities=11% Similarity=0.254 Sum_probs=7.6
Q ss_pred CCcEEeEEE
Q psy987 12 NGAYYKVIV 20 (114)
Q Consensus 12 ngawwkA~V 20 (114)
+.+||.+..
T Consensus 37 ~~~Ww~g~~ 45 (60)
T 1oot_A 37 QNDWWTGRV 45 (60)
T ss_dssp TTSEEEEEE
T ss_pred CCCeEEEEE
Confidence 678999986
No 122
>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}
Probab=21.43 E-value=80 Score=18.29 Aligned_cols=9 Identities=0% Similarity=0.231 Sum_probs=7.6
Q ss_pred CCcEEeEEE
Q psy987 12 NGAYYKVIV 20 (114)
Q Consensus 12 ngawwkA~V 20 (114)
+.+||.+..
T Consensus 39 ~~~Ww~g~~ 47 (71)
T 2jt4_A 39 SKDWWMCQL 47 (71)
T ss_dssp CSSEEEEEE
T ss_pred CCCCEEEEE
Confidence 678999987
No 123
>2bp3_A Filamin A; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens} SCOP: b.1.18.10 PDB: 2aav_A
Probab=21.39 E-value=1.2e+02 Score=18.90 Aligned_cols=30 Identities=20% Similarity=0.154 Sum_probs=22.4
Q ss_pred cceeeeecCCCcEEeEEEEEEeCCeEEEEEcc
Q psy987 3 ELEVEVCGENGAYYKVIVKMIKGDFHVVEYLG 34 (114)
Q Consensus 3 ~l~VEv~g~ngawwkA~Vk~vkgd~~vV~f~~ 34 (114)
.|.|.+.|..+.+- .+++.++..|.|.|.-
T Consensus 38 ~l~v~v~~p~~~~~--~v~d~~dGty~v~Y~p 67 (97)
T 2bp3_A 38 GLSLAIEGPSKAEI--SCTDNQDGTCSVSYLP 67 (97)
T ss_dssp EEEEEEEESSCCEE--EEEECSSSEEEEEEEC
T ss_pred cEEEEEECCCCCEE--EEEECCCCEEEEEEEe
Confidence 46788888776543 5788888889999864
No 124
>1ssf_A Transformation related protein 53 binding protein 1; tudor domains, tandem, SH3-like fold, beta barrel, alpha- helix, cell cycle; NMR {Mus musculus} SCOP: b.34.9.1 b.34.9.1
Probab=21.27 E-value=69 Score=23.45 Aligned_cols=24 Identities=17% Similarity=0.129 Sum_probs=18.0
Q ss_pred CCcEEeEEEEEEeCC-eEEEEEccC
Q psy987 12 NGAYYKVIVKMIKGD-FHVVEYLGC 35 (114)
Q Consensus 12 ngawwkA~Vk~vkgd-~~vV~f~~w 35 (114)
++=||.|+|+...++ -|.|-|+..
T Consensus 22 ~~yyYpG~V~~~~~~~~Y~V~FdDG 46 (156)
T 1ssf_A 22 NGYFYSGKITRDVGAGKYKLLFDDG 46 (156)
T ss_dssp SSEEEEEEEEECCTTTEEEEECTTS
T ss_pred CCcccccEEEEeccCCEEEEEEcCC
Confidence 555779999966555 599999873
No 125
>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A
Probab=21.27 E-value=47 Score=18.98 Aligned_cols=9 Identities=11% Similarity=0.338 Sum_probs=7.1
Q ss_pred CCcEEeEEE
Q psy987 12 NGAYYKVIV 20 (114)
Q Consensus 12 ngawwkA~V 20 (114)
..+||.|..
T Consensus 40 ~~~W~~g~~ 48 (64)
T 2jte_A 40 EAGWWKGEL 48 (64)
T ss_dssp STTEEEEEE
T ss_pred CCCEEEEEE
Confidence 467999985
No 126
>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic}
Probab=21.07 E-value=47 Score=19.69 Aligned_cols=8 Identities=38% Similarity=0.605 Sum_probs=6.9
Q ss_pred CCcEEeEE
Q psy987 12 NGAYYKVI 19 (114)
Q Consensus 12 ngawwkA~ 19 (114)
+++||.+.
T Consensus 31 ~~~Ww~g~ 38 (73)
T 2kxd_A 31 NKDWWKVE 38 (73)
T ss_dssp SSSEEEEE
T ss_pred CCCEEEEE
Confidence 67899996
No 127
>2k9u_A Gamma filamin; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=20.81 E-value=85 Score=20.60 Aligned_cols=30 Identities=23% Similarity=0.230 Sum_probs=23.4
Q ss_pred cceeeeecCCCcEEeEEEEEEeCCeEEEEEcc
Q psy987 3 ELEVEVCGENGAYYKVIVKMIKGDFHVVEYLG 34 (114)
Q Consensus 3 ~l~VEv~g~ngawwkA~Vk~vkgd~~vV~f~~ 34 (114)
.|.|++.|..++ ...|++.++..|.|.|.-
T Consensus 50 ~l~v~v~~p~~~--~~~v~d~~dGty~v~Y~p 79 (119)
T 2k9u_A 50 GLSIAVEGPSKA--EIAFEDRKDGSCGVSYVV 79 (119)
T ss_dssp EEEEEEESSSCC--EEEEECCSSSEEEEEEEC
T ss_pred cEEEEEeCCCCC--eEEEEECCCCEEEEEEEE
Confidence 578888887774 346788888899999965
No 128
>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A
Probab=20.78 E-value=66 Score=18.73 Aligned_cols=9 Identities=11% Similarity=0.401 Sum_probs=7.2
Q ss_pred CCCcEEeEE
Q psy987 11 ENGAYYKVI 19 (114)
Q Consensus 11 ~ngawwkA~ 19 (114)
.+.+||+|+
T Consensus 39 ~~~~Ww~g~ 47 (71)
T 1u5s_A 39 NDPEWWKCK 47 (71)
T ss_dssp TTTCEEEEE
T ss_pred CCCCCEEEE
Confidence 367899997
No 129
>4fu6_A PC4 and SFRS1-interacting protein; structural genomics consortium, SGC, transcription; 2.10A {Homo sapiens} PDB: 2b8a_A 2nlu_A
Probab=20.69 E-value=45 Score=23.26 Aligned_cols=40 Identities=10% Similarity=0.144 Sum_probs=23.2
Q ss_pred eecCCCcEEeEEEEEE-------eCCeEEEEEccCcceeeeeecCccccCC
Q psy987 8 VCGENGAYYKVIVKMI-------KGDFHVVEYLGCQSTFTEIVPPERMRQK 51 (114)
Q Consensus 8 v~g~ngawwkA~Vk~v-------kgd~~vV~f~~w~~~~~eiv~~~RLrp~ 51 (114)
+.|- -||.|+|... ....+.|.|.+- .+| --+...+|.|-
T Consensus 33 ~~g~--p~WPa~V~~~~~~~~~~~~~~~~V~FfG~-~~~-awv~~~~l~~f 79 (153)
T 4fu6_A 33 MKGY--PHWPARVDEVPDGAVKPPTNKLPIFFFGT-HET-AFLGPKDIFPY 79 (153)
T ss_dssp CTTS--CCEEEEECCCC---CCCCTTCEEEEETTT-CCE-EEECGGGEEEH
T ss_pred CCCC--CCCCEEEeEchhhccCCCCCEEEEEecCC-CCe-EEeCHHHccCh
Confidence 4453 3999999543 234688888762 223 23444555544
No 130
>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens}
Probab=20.62 E-value=73 Score=18.53 Aligned_cols=15 Identities=20% Similarity=0.273 Sum_probs=10.5
Q ss_pred eeeecCCCcEEeEEE
Q psy987 6 VEVCGENGAYYKVIV 20 (114)
Q Consensus 6 VEv~g~ngawwkA~V 20 (114)
|+|-....+||++..
T Consensus 32 i~v~~~~~~Ww~~~~ 46 (68)
T 1wxt_A 32 LEVLDHSKRWWLVKN 46 (68)
T ss_dssp EEEEECSSSEEEEEC
T ss_pred EEEEEcCCCEEEEEE
Confidence 455555678999974
No 131
>1ri0_A Hepatoma-derived growth factor; HDGF, HATH domain, PWWP domain, heparin-binding, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.9.2 PDB: 2b8a_A 2nlu_A
Probab=20.45 E-value=71 Score=21.26 Aligned_cols=36 Identities=8% Similarity=0.153 Sum_probs=22.6
Q ss_pred cEEeEEEEEEe-------CCeEEEEEccCcceeeeeecCccccCC
Q psy987 14 AYYKVIVKMIK-------GDFHVVEYLGCQSTFTEIVPPERMRQK 51 (114)
Q Consensus 14 awwkA~Vk~vk-------gd~~vV~f~~w~~~~~eiv~~~RLrp~ 51 (114)
-||.|+|-++- ...+.|.|-+- .++- -+...+|.|-
T Consensus 34 P~WPa~V~~~p~~~~k~~~~~~~V~FFGt-~~~a-wv~~~~l~pf 76 (110)
T 1ri0_A 34 PHWPARIDEMPEAAVKSTANKYQVFFFGT-HETA-FLGPKDLFPY 76 (110)
T ss_dssp EEEEEEEECCCSSSSCCCSSCEEEEETTT-TEEE-EECSTTEECH
T ss_pred CCCCEEEecccHhhcCCCCCEEEEEEecC-CCEE-EECHHHccch
Confidence 49999997643 45778888752 3332 3455555554
No 132
>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=20.39 E-value=53 Score=19.24 Aligned_cols=10 Identities=0% Similarity=0.129 Sum_probs=7.9
Q ss_pred CCcEEeEEEE
Q psy987 12 NGAYYKVIVK 21 (114)
Q Consensus 12 ngawwkA~Vk 21 (114)
+.+||.|...
T Consensus 41 ~~~Ww~g~~~ 50 (72)
T 2kgt_A 41 EEQWWWATLL 50 (72)
T ss_dssp CSSCEEEEEE
T ss_pred CCCEEEEEEc
Confidence 6779999864
No 133
>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A
Probab=20.28 E-value=45 Score=19.92 Aligned_cols=15 Identities=7% Similarity=0.240 Sum_probs=10.6
Q ss_pred eeeecCCCcEEeEEE
Q psy987 6 VEVCGENGAYYKVIV 20 (114)
Q Consensus 6 VEv~g~ngawwkA~V 20 (114)
|+|-...++||.|..
T Consensus 29 i~vl~~~~~Ww~~~~ 43 (67)
T 2b86_A 29 LWLLDDSKTWWRVRN 43 (67)
T ss_dssp EEEEECSSSSCEEEC
T ss_pred EEEEecCCCeEEEEe
Confidence 456555678999973
No 134
>1n0e_A Protein MRAZ; cell division and cell WALL biosynthesis protein, structural genomics, BSGC structure funded by NIH; 2.70A {Mycoplasma pneumoniae} SCOP: b.129.1.2 PDB: 1n0f_A 1n0g_A
Probab=20.28 E-value=42 Score=24.38 Aligned_cols=16 Identities=6% Similarity=0.171 Sum_probs=13.0
Q ss_pred EecCchhHHHhhhccC
Q psy987 98 DIEVPLDVQELGLMRD 113 (114)
Q Consensus 98 ~~~vpedlre~~~~~~ 113 (114)
.|-+|..||++|.+.+
T Consensus 111 RIlIP~~LR~~AgL~k 126 (166)
T 1n0e_A 111 RVLIPNNLINDAKLDK 126 (166)
T ss_dssp EEECCHHHHHHTTCCS
T ss_pred eEeCCHHHHHHhCCCc
Confidence 4678999999998753
No 135
>2gfu_A DNA mismatch repair protein MSH6; PWWP domain, tudor domain, DNA binding, DNA binding protein; HET: DNA; NMR {Homo sapiens}
Probab=20.05 E-value=58 Score=22.19 Aligned_cols=40 Identities=15% Similarity=0.146 Sum_probs=25.8
Q ss_pred cEEeEEEEEE---------eC--CeEEEEEccCcceeeeeecCccccCCCCC
Q psy987 14 AYYKVIVKMI---------KG--DFHVVEYLGCQSTFTEIVPPERMRQKNTN 54 (114)
Q Consensus 14 awwkA~Vk~v---------kg--d~~vV~f~~w~~~~~eiv~~~RLrp~n~n 54 (114)
-||.|.|.+. +| ..+.|.|.+-..+|. -+...+|.|-..+
T Consensus 37 P~WPa~V~~~~~~~~~~~~~~~~~~~~V~FFg~~~~~a-Wv~~~~l~pf~~~ 87 (134)
T 2gfu_A 37 PWWPSLVYNHPFDGTFIREKGKSVRVHVQFFDDSPTRG-WVSKRLLKPYTGS 87 (134)
T ss_dssp CCEEEECCCCSSTTCCEEESSSCEEEEEEECSSSCEEE-EECGGGEEESCCT
T ss_pred CCCCeeecchhhhhhhhhccCCCceEEEEECCCCCceE-EECHHHcccCcch
Confidence 4999999775 22 468888876434443 3466677776543
Done!