Query psy9871
Match_columns 340
No_of_seqs 98 out of 115
Neff 4.7
Searched_HMMs 46136
Date Fri Aug 16 21:46:37 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9871.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/9871hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2390|consensus 100.0 5E-81 1.1E-85 630.6 19.5 315 4-337 347-669 (669)
2 PF13890 Rab3-GTPase_cat: Rab3 100.0 9.6E-68 2.1E-72 469.6 12.9 139 4-144 24-164 (164)
3 PF04799 Fzo_mitofusin: fzo-li 53.5 17 0.00037 33.4 3.8 43 201-245 127-169 (171)
4 PHA03373 tegument protein; Pro 39.0 3.8E+02 0.0082 26.1 11.4 50 107-157 1-62 (247)
5 PRK00523 hypothetical protein; 28.4 90 0.0019 25.0 3.7 30 19-51 37-66 (72)
6 PRK10807 paraquat-inducible pr 27.3 7.2E+02 0.016 26.7 11.4 95 132-227 419-523 (547)
7 COG4026 Uncharacterized protei 26.6 4.4E+02 0.0095 25.8 8.7 92 138-229 96-191 (290)
8 PF03672 UPF0154: Uncharacteri 25.2 1.1E+02 0.0025 23.9 3.7 29 19-50 29-57 (64)
9 PRK01844 hypothetical protein; 24.3 1.2E+02 0.0026 24.4 3.8 30 19-51 36-65 (72)
10 TIGR02780 TrbJ_Ti P-type conju 23.6 4.5E+02 0.0097 25.0 8.3 28 119-146 19-46 (246)
11 COG3098 Uncharacterized protei 22.1 3.9E+02 0.0084 23.1 6.6 83 112-219 22-106 (109)
12 KOG2122|consensus 20.5 2.4E+02 0.0053 34.5 6.6 33 204-245 387-419 (2195)
No 1
>KOG2390|consensus
Probab=100.00 E-value=5e-81 Score=630.57 Aligned_cols=315 Identities=32% Similarity=0.454 Sum_probs=266.5
Q ss_pred CCCccceeccccCccCCCCChHHHHHHHHHHHhcCCchhhHHHHHHHHHHhhHhhHHHhhhcCCCcchhhhhhhhCCCCc
Q psy9871 4 VRKLILYYQISLDFLIVIKTEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPGAILEDFIRWYSPRDF 83 (340)
Q Consensus 4 ~~~~~l~~P~tQ~~~~~p~TeD~l~e~~~~l~~lg~~~~~~~~r~~mqs~~LlSDM~aFKaANpg~v~eDFVrW~SPrD~ 83 (340)
.||+|||||+||| |+|||||||+|++|+|.+||+ |++++.+||+.+|+|||+|||||||||+||||||||||+||
T Consensus 347 ~pdEplYiPvTQE--p~plTEDli~e~~EvllklG~---g~~L~~qm~~~~llsdmeSfkAANPgcilEDFvRWhSPkDw 421 (669)
T KOG2390|consen 347 IPDEPLYIPVTQE--PCPLTEDLIDERNEVLLKLGE---GDRLHLQMELVKLLSDMESFKAANPGCILEDFVRWHSPKDW 421 (669)
T ss_pred cCCCceeecccCC--CCCCcHHHHHHHHHHHHhcCc---cchhHHHHHHHHHHHHHHHHhcCCCCccHHHhhhhcCCcch
Confidence 4899999999999 999999999999999999999 78999999999999999999999999999999999999999
Q ss_pred ccccccccccc-cCCccccccCCCCChHHHHhhhcCCCCcccccCCCCcHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH
Q psy9871 84 IESSELDQYGQ-KKGSLSARMLLPGNTWREVWEAAKPVPARRQRRLFNDTKEAEKILHLFECQSPGSVAVLLVPALIHGA 162 (340)
Q Consensus 84 ~~~~~~~~~~~-~~g~LS~RM~~~~N~W~~~W~~A~p~pa~~Qk~LFD~~~eaEkvLh~Let~~p~~l~~qll~~~l~aa 162 (340)
+++.||+|+ ++|+||.||+++||+|+++|++|+|+||++|+||||+|+||||||||||+++++||++||+|++||+|
T Consensus 422 --eevsdEkgn~vkgqLS~RM~iegN~W~e~WEtAkpiPv~rQarLFDDt~eaekiLhYLe~~k~ael~e~l~~~l~haa 499 (669)
T KOG2390|consen 422 --EEVSDEKGNPVKGQLSERMLIEGNVWVESWETAKPIPVARQARLFDDTKEAEKILHYLENAKLAELREWLKPTLFHAA 499 (669)
T ss_pred --hhhcccccccchhhhhhhhccccchHHHHHHhcCCCchhhccccccchHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 578999996 69999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhcCCCchhHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHHHHHHhh-hc-CCCCCchHHHHHH
Q psy9871 163 VSRLLEAIHSVPVPSLGRMASHLIKRVEFATRCSEMELKRYQDICSEIGQIEALVSQYHSLHH-KL-SPDNNDASTQQFL 240 (340)
Q Consensus 163 ~~~l~~~~~~~~lp~~~~~i~~l~~~~~~~l~~~~~~~~~~~~l~~~i~~vE~~v~~a~SL~~-Kf-~~~~~~~~l~~~v 240 (340)
+.+|.+ +..+...+.+.+-|+......+.+.+++..+++.+||.+|+.||+++.++.+|++ ++ ++++.+..+++ |
T Consensus 500 ~lkl~e--sL~n~e~~~k~~~qi~k~ls~~c~~~~~~d~eL~~ic~qie~ve~m~~R~~qlk~fem~~~yps~sslq~-v 576 (669)
T KOG2390|consen 500 LLKLTE--SLGNSEEKQKQRTQIAKILSNACLNNTPMDNELSKICSQIEMVENMKVRLMQLKEFEMHPPYPSESSLQS-V 576 (669)
T ss_pred HHHHHH--hhcchHHHHHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccchhh-h
Confidence 999988 4455555555555555555566677788889999999999999999999999999 33 45577778888 6
Q ss_pred HHHhhCCCceeecCCCCcchHHHHHHHhhhhhccc--ccc-ccCCCCCCCCCCCCcceeEEEEeeCC-CCCCCCCCC-Cc
Q psy9871 241 ADLVMNPSSIIQVPEGPHGVIGKRMSQMFYEAQKD--TDV-WKLPASPFSPLPSPACREFILRVVAP-RPAPSSRPT-PH 315 (340)
Q Consensus 241 ~~ll~~~e~~v~v~~~~~g~~g~~i~~lf~~~~~~--~~~-~~~~~s~~~~~p~P~~REyIlR~~~~-rp~~~S~~~-Pq 315 (340)
+ |.++| |...|. .|.+|++.|+.++-. ... ..+-.-...+.+.++.||||+|+.++ ++.++|..+ ||
T Consensus 577 k--L~~~e--vl~~d~----~~tiv~rrf~~ag~g~L~r~~~prlqn~v~de~~~~ske~ipRtt~~~~t~~ks~~l~pq 648 (669)
T KOG2390|consen 577 K--LVNIE--VLNLDE----EPTIVIRRFDPAGIGKLDRLTEPRLQNGVRDEYIFNSKESIPRTTTIPMTHRKSADLSPQ 648 (669)
T ss_pred h--cccHh--hhccCc----ccceeeeccccccchHHHhhccHhhhccCcccccccccCccccccCCcccccchhhcCCC
Confidence 6 44555 444422 234455555554410 000 00011125688999999999998864 899999988 99
Q ss_pred eEEEEecCCCceEEEeeeccCC
Q psy9871 316 KLTALIMAPDSLIMSGCFTQDT 337 (340)
Q Consensus 316 RMYa~lt~~e~~Rlagafs~d~ 337 (340)
+||+..++.. +|+|||||++|
T Consensus 649 ~mrs~~t~e~-~rl~gafss~t 669 (669)
T KOG2390|consen 649 DMRSLYTSEA-NRLNGAFSSYT 669 (669)
T ss_pred Ccchhhhhhh-hhhcccccCCC
Confidence 9999999999 99999999986
No 2
>PF13890 Rab3-GTPase_cat: Rab3 GTPase-activating protein catalytic subunit
Probab=100.00 E-value=9.6e-68 Score=469.65 Aligned_cols=139 Identities=58% Similarity=0.925 Sum_probs=134.1
Q ss_pred CCCccceeccccCccCCCCChHHHHHHHHHHHhcCCchhhHHHHHHHHHHhhHhhHHHhhhcCCCcchhhhhhhhCCCCc
Q psy9871 4 VRKLILYYQISLDFLIVIKTEDQIEEDAEFLLSLGTDLESSQLRAKLMSASLLSDMESFKAANPGAILEDFIRWYSPRDF 83 (340)
Q Consensus 4 ~~~~~l~~P~tQ~~~~~p~TeD~l~e~~~~l~~lg~~~~~~~~r~~mqs~~LlSDM~aFKaANpg~v~eDFVrW~SPrD~ 83 (340)
..|+|||+|+||+ ++|||||||+||+++|.+||++++|+++|+||||++|+|||||||||||||||+|||||||||||
T Consensus 24 ~~gepl~~P~tQ~--~~p~TeD~l~e~~e~l~~lg~~~~~~~~r~~mQs~~LlSDM~aFKAANpg~vfeDFVRW~SPrDw 101 (164)
T PF13890_consen 24 ETGEPLYIPITQE--PPPMTEDMLEEQEEELLKLGTSAEGSELRARMQSASLLSDMQAFKAANPGCVFEDFVRWYSPRDW 101 (164)
T ss_pred CCCCEeecCCCCC--CCCCcHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHhcCCCcchHhhhhccCCCCc
Confidence 4699999999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccc--cCCccccccCCCCChHHHHhhhcCCCCcccccCCCCcHHHHHHHHHHHhc
Q psy9871 84 IESSELDQYGQ--KKGSLSARMLLPGNTWREVWEAAKPVPARRQRRLFNDTKEAEKILHLFEC 144 (340)
Q Consensus 84 ~~~~~~~~~~~--~~g~LS~RM~~~~N~W~~~W~~A~p~pa~~Qk~LFD~~~eaEkvLh~Let 144 (340)
++++..+++++ .+|+||+||+++||+|+++|++|+|+||++||||||+++|||||||||||
T Consensus 102 ~~~~~~~~~~~~~~~g~LS~RM~~~~N~W~~~W~~A~p~pa~~Qk~LFD~~~eaEkvlhyLEt 164 (164)
T PF13890_consen 102 IEEEVDDEKGNFAPEGYLSERMRIPGNIWRELWESAKPVPASRQKRLFDPTKEAEKVLHYLET 164 (164)
T ss_pred CcCcccccccCCCCCCCccHHHcCCCChHHHHHhcCCCCChhhccccCChHHHHHHHHHHHhC
Confidence 99887777654 49999999999999999999999999999999999999999999999997
No 3
>PF04799 Fzo_mitofusin: fzo-like conserved region; InterPro: IPR006884 This entry represents the heptad repeat domain which is conserved at the C terminus of Fzo/mitofusion family of GTPases. Fzo is a mediator of mitochondrial fusion during spermatogenesis []. This conserved region is also found in the human mitofusin protein []. This domain forms a dimeric antiparallel coiled coil structure, which has been proposed to act as a mitochodrial tether before vesicle fusion [].; GO: 0003924 GTPase activity, 0006184 GTP catabolic process, 0008053 mitochondrial fusion, 0005741 mitochondrial outer membrane, 0016021 integral to membrane; PDB: 1T3J_A.
Probab=53.48 E-value=17 Score=33.41 Aligned_cols=43 Identities=16% Similarity=0.280 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchHHHHHHHHHhh
Q psy9871 201 KRYQDICSEIGQIEALVSQYHSLHHKLSPDNNDASTQQFLADLVM 245 (340)
Q Consensus 201 ~~~~~l~~~i~~vE~~v~~a~SL~~Kf~~~~~~~~l~~~v~~ll~ 245 (340)
.++.++...|+.+|.+..++..|+.|... =..+++.|-++++.
T Consensus 127 ~eI~~L~~~i~~le~~~~~~k~LrnKa~~--L~~eL~~F~~~yL~ 169 (171)
T PF04799_consen 127 DEIKQLEKEIQRLEEIQSKSKTLRNKANW--LESELERFQEQYLQ 169 (171)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHhcc
Confidence 68899999999999999999999999843 34677888887763
No 4
>PHA03373 tegument protein; Provisional
Probab=38.95 E-value=3.8e+02 Score=26.11 Aligned_cols=50 Identities=18% Similarity=0.158 Sum_probs=31.2
Q ss_pred CChHHHHhhh-----cCCCCcccccCCC-CcHHHHHHHHHHHhc------CChHHHHHHHHHH
Q psy9871 107 GNTWREVWEA-----AKPVPARRQRRLF-NDTKEAEKILHLFEC------QSPGSVAVLLVPA 157 (340)
Q Consensus 107 ~N~W~~~W~~-----A~p~pa~~Qk~LF-D~~~eaEkvLh~Let------~~p~~l~~qll~~ 157 (340)
||.|+++|.= -.+..+. ---|- +...+.+....|||. +++++|....=-+
T Consensus 1 ~~~~rRl~~f~~crr~~~~~a~-Y~lL~~sedve~~eL~~flee~f~~lGit~~Di~~~~rDt 62 (247)
T PHA03373 1 GNCARRLCDFVLCRRRAPDGAE-YVLLRPSEDVELAELEAFLEENFKDFGITQADIRSLSRDT 62 (247)
T ss_pred CcHHHHHHHHHHhhccCCCCCc-eEEecCcchhhHHHHHHHHHHhHHhcCcCHHHHHHHhhhh
Confidence 6899999992 2222222 22232 466677778888887 8888887654333
No 5
>PRK00523 hypothetical protein; Provisional
Probab=28.38 E-value=90 Score=25.04 Aligned_cols=30 Identities=20% Similarity=0.273 Sum_probs=22.5
Q ss_pred CCCCChHHHHHHHHHHHhcCCchhhHHHHHHHH
Q psy9871 19 IVIKTEDQIEEDAEFLLSLGTDLESSQLRAKLM 51 (340)
Q Consensus 19 ~~p~TeD~l~e~~~~l~~lg~~~~~~~~r~~mq 51 (340)
-||.||||++. .+.++|.-.....+++-|+
T Consensus 37 NPpine~mir~---M~~QMGqKPSekki~Q~m~ 66 (72)
T PRK00523 37 NPPITENMIRA---MYMQMGRKPSESQIKQVMR 66 (72)
T ss_pred CcCCCHHHHHH---HHHHhCCCccHHHHHHHHH
Confidence 79999999975 6778898776555555543
No 6
>PRK10807 paraquat-inducible protein B; Provisional
Probab=27.32 E-value=7.2e+02 Score=26.67 Aligned_cols=95 Identities=6% Similarity=0.129 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhh---hh-------cCCCchhHHHHHHHHHHHHHHhhccCccchH
Q psy9871 132 TKEAEKILHLFECQSPGSVAVLLVPALIHGAVSRLLE---AI-------HSVPVPSLGRMASHLIKRVEFATRCSEMELK 201 (340)
Q Consensus 132 ~~eaEkvLh~Let~~p~~l~~qll~~~l~aa~~~l~~---~~-------~~~~lp~~~~~i~~l~~~~~~~l~~~~~~~~ 201 (340)
...+..+|.=++.++..+++..+-. .+..+-.++.+ .. .......+...+++.+..+.+++..-.++..
T Consensus 419 ~~~~~~il~kin~lple~i~~~l~~-tL~~~~~tl~~l~~~l~~l~~ll~~~~~~~Lp~~L~~TL~~l~~~l~~~~~~s~ 497 (547)
T PRK10807 419 QQKLMEALDKINNLPLNPMIEQATS-TLSESQRTMRELQTTLDSLNKITSSQSMQQLPADMQKTLRELNRSMQGFQPGSP 497 (547)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHhhcCCCCh
Confidence 3577889999999999999998532 22222222221 10 1111112223344444444555443334555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy9871 202 RYQDICSEIGQIEALVSQYHSLHHKL 227 (340)
Q Consensus 202 ~~~~l~~~i~~vE~~v~~a~SL~~Kf 227 (340)
.+.++-..+++++++..-.+.|-..|
T Consensus 498 ~~~~l~~tl~~l~~~~r~lr~l~~~L 523 (547)
T PRK10807 498 AYNKMVADMQRLDQVLRELQPVLKTL 523 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666666666655554444433
No 7
>COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only]
Probab=26.63 E-value=4.4e+02 Score=25.83 Aligned_cols=92 Identities=20% Similarity=0.138 Sum_probs=57.5
Q ss_pred HHHHHhcCChHHHHHHHHHHHHHHHHHHHhhhhcCCCchh----HHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHH
Q psy9871 138 ILHLFECQSPGSVAVLLVPALIHGAVSRLLEAIHSVPVPS----LGRMASHLIKRVEFATRCSEMELKRYQDICSEIGQI 213 (340)
Q Consensus 138 vLh~Let~~p~~l~~qll~~~l~aa~~~l~~~~~~~~lp~----~~~~i~~l~~~~~~~l~~~~~~~~~~~~l~~~i~~v 213 (340)
+=|-+|.+.|.-+...|-.+++.|.+.+|........+.. ++.+++.+...-..++.-...-...|+++-..|..+
T Consensus 96 iGHDvEhiD~elvrkEl~nAlvRAGLktL~~v~~~~d~ke~~ee~kekl~E~~~EkeeL~~eleele~e~ee~~erlk~l 175 (290)
T COG4026 96 IGHDVEHIDVELVRKELKNALVRAGLKTLQRVPEYMDLKEDYEELKEKLEELQKEKEELLKELEELEAEYEEVQERLKRL 175 (290)
T ss_pred CCCCccccCHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467899999999999999999999999976543333322 223333333222222221111224666677777777
Q ss_pred HHHHHHHHHHhhhcCC
Q psy9871 214 EALVSQYHSLHHKLSP 229 (340)
Q Consensus 214 E~~v~~a~SL~~Kf~~ 229 (340)
|.-.++.+--..|+++
T Consensus 176 e~E~s~LeE~~~~l~~ 191 (290)
T COG4026 176 EVENSRLEEMLKKLPG 191 (290)
T ss_pred HHHHHHHHHHHHhchh
Confidence 7777777777777765
No 8
>PF03672 UPF0154: Uncharacterised protein family (UPF0154); InterPro: IPR005359 The proteins in this entry are functionally uncharacterised.
Probab=25.18 E-value=1.1e+02 Score=23.89 Aligned_cols=29 Identities=14% Similarity=0.271 Sum_probs=21.1
Q ss_pred CCCCChHHHHHHHHHHHhcCCchhhHHHHHHH
Q psy9871 19 IVIKTEDQIEEDAEFLLSLGTDLESSQLRAKL 50 (340)
Q Consensus 19 ~~p~TeD~l~e~~~~l~~lg~~~~~~~~r~~m 50 (340)
-||.|||||++ .+.++|.......++.=|
T Consensus 29 NPpine~mir~---M~~QMG~kpSekqi~Q~m 57 (64)
T PF03672_consen 29 NPPINEKMIRA---MMMQMGRKPSEKQIKQMM 57 (64)
T ss_pred CCCCCHHHHHH---HHHHhCCCccHHHHHHHH
Confidence 79999999976 667789877654454443
No 9
>PRK01844 hypothetical protein; Provisional
Probab=24.33 E-value=1.2e+02 Score=24.35 Aligned_cols=30 Identities=7% Similarity=0.186 Sum_probs=22.3
Q ss_pred CCCCChHHHHHHHHHHHhcCCchhhHHHHHHHH
Q psy9871 19 IVIKTEDQIEEDAEFLLSLGTDLESSQLRAKLM 51 (340)
Q Consensus 19 ~~p~TeD~l~e~~~~l~~lg~~~~~~~~r~~mq 51 (340)
-||.||||++. .+.++|.-.....+++-|.
T Consensus 36 NPpine~mir~---Mm~QMGqkPSekki~Q~m~ 65 (72)
T PRK01844 36 NPPINEQMLKM---MMMQMGQKPSQKKINQMMS 65 (72)
T ss_pred CCCCCHHHHHH---HHHHhCCCccHHHHHHHHH
Confidence 79999999975 6777898776555555443
No 10
>TIGR02780 TrbJ_Ti P-type conjugative transfer protein TrbJ. The TrbJ protein is found in the trb locus of Agrobacterium Ti plasmids where it is involved in the type IV secretion system for plasmid conjugative transfer. TrbJ is a homolog of the F-type TraE protein (which is believed to be an inner membrane pore-forming protein, TIGR02761) as well as the vir system VirB5 protein.
Probab=23.58 E-value=4.5e+02 Score=25.02 Aligned_cols=28 Identities=25% Similarity=0.266 Sum_probs=22.2
Q ss_pred CCCcccccCCCCcHHHHHHHHHHHhcCC
Q psy9871 119 PVPARRQRRLFNDTKEAEKILHLFECQS 146 (340)
Q Consensus 119 p~pa~~Qk~LFD~~~eaEkvLh~Let~~ 146 (340)
+.|++-+-+.||++..++-++.|.+.+.
T Consensus 19 ~~~a~A~i~V~D~an~~q~i~~aa~~~~ 46 (246)
T TIGR02780 19 PAPAGAPVTCINCANFSQQILTAAESVE 46 (246)
T ss_pred cccccCCceeecchhHHHHHHHHHHHHH
Confidence 3455557799999999999999977654
No 11
>COG3098 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.05 E-value=3.9e+02 Score=23.07 Aligned_cols=83 Identities=12% Similarity=0.229 Sum_probs=47.8
Q ss_pred HHhhhcCCCCc--ccccCCCCcHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhhhhcCCCchhHHHHHHHHHHHH
Q psy9871 112 EVWEAAKPVPA--RRQRRLFNDTKEAEKILHLFECQSPGSVAVLLVPALIHGAVSRLLEAIHSVPVPSLGRMASHLIKRV 189 (340)
Q Consensus 112 ~~W~~A~p~pa--~~Qk~LFD~~~eaEkvLh~Let~~p~~l~~qll~~~l~aa~~~l~~~~~~~~lp~~~~~i~~l~~~~ 189 (340)
.+|....|-|- .-+.|.|-||.++ .|-+++++..=+++.+.. .....+--.+...++..++
T Consensus 22 ~lWq~~pP~~~af~S~ePF~vDTm~p------------~eWLQWvfiPRM~~lle~---~~~lP~~fai~PY~EeAl~-- 84 (109)
T COG3098 22 QLWQTDPPQPEAFLSTEPFFVDTMEP------------EEWLQWVFIPRMHALLES---NQALPNAFAIAPYYEEALA-- 84 (109)
T ss_pred chhccCCCcHHHhcCCCCccccccCH------------HHHHHHHHHHHHHHHHHc---CCCCCcchhhhHHHHHHHh--
Confidence 46777888773 5788888877665 455566666656654432 1111111122333333331
Q ss_pred HHhhccCccchHHHHHHHHHHHHHHHHHHH
Q psy9871 190 EFATRCSEMELKRYQDICSEIGQIEALVSQ 219 (340)
Q Consensus 190 ~~~l~~~~~~~~~~~~l~~~i~~vE~~v~~ 219 (340)
- +-..+..++..|+.+++++.+
T Consensus 85 --~------~~~~~a~lLa~l~~ld~L~~~ 106 (109)
T COG3098 85 --G------DHPQRAALLAVLQELDALFAK 106 (109)
T ss_pred --c------cchHHHHHHHHHHHHHHHHcC
Confidence 1 225778888999998888753
No 12
>KOG2122|consensus
Probab=20.47 E-value=2.4e+02 Score=34.49 Aligned_cols=33 Identities=30% Similarity=0.415 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCCchHHHHHHHHHhh
Q psy9871 204 QDICSEIGQIEALVSQYHSLHHKLSPDNNDASTQQFLADLVM 245 (340)
Q Consensus 204 ~~l~~~i~~vE~~v~~a~SL~~Kf~~~~~~~~l~~~v~~ll~ 245 (340)
..||.+=+.||.+|++..| ++++|.+++..+|+
T Consensus 387 a~LCs~rgfMeavVAQL~s---------~peeL~QV~AsvLR 419 (2195)
T KOG2122|consen 387 ATLCSQRGFMEAVVAQLIS---------APEELLQVYASVLR 419 (2195)
T ss_pred hhhhhhhhHHHHHHHHHhc---------ChHHHHHHHHHHHH
Confidence 4689999999999888765 45566666666664
Done!