BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9876
(193 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1DSW|A Chain A, The Solution Structure Of A Monomeric, Reduced Form Of
Human Copper, Zinc Superoxide Dismutase Bearing The Same
Charge As The Native Protein
Length = 153
Score = 99.8 bits (247), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 59/79 (74%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+G + I D V+SL G +I+GR +VVHEKADDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDL 126
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 127 GKGGNEESTKTGNAGSRLA 145
Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 47/70 (67%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AVA+L G V+G + F Q + GPV + G+I GLT G HGFH+HE+ D + GC S GPH
Sbjct: 4 AVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSAGPH 63
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 64 FNP---LSRK 70
>pdb|1PTZ|A Chain A, Crystal Structure Of The Human Cu, Zn Superoxide
Dismutase, Familial Amyotrophic Lateral Sclerosis (Fals)
Mutant H43r
pdb|1PTZ|B Chain B, Crystal Structure Of The Human Cu, Zn Superoxide
Dismutase, Familial Amyotrophic Lateral Sclerosis (Fals)
Mutant H43r
Length = 153
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 59/79 (74%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+G + I D V+SL G +I+GR +VVHEKADDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDL 126
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 127 GKGGNEESTKTGNAGSRLA 145
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AVA+L G V+G + F Q + GPV + G+I GLT G GFH+HE GD + GC S GPH
Sbjct: 4 AVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLRGFHVHEFGDNTAGCTSAGPH 63
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 64 FNP---LSRK 70
>pdb|1SOS|A Chain A, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|F Chain F, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|B Chain B, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|G Chain G, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|C Chain C, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|H Chain H, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|D Chain D, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|I Chain I, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|E Chain E, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|J Chain J, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
Length = 154
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 59/79 (74%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+G + I D V+SL G +I+GR +VVHEKADDL
Sbjct: 68 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDL 127
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 128 GKGGNEESTKTGNAGSRLA 146
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 47/70 (67%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AVA+L G V+G + F Q + GPV + G+I GLT G HGFH+HE GD + GC S GPH
Sbjct: 5 AVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPH 64
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 65 FNP---LSRK 71
>pdb|1L3N|A Chain A, The Solution Structure Of Reduced Dimeric Copper Zinc Sod:
The Structural Effects Of Dimerization
pdb|1L3N|B Chain B, The Solution Structure Of Reduced Dimeric Copper Zinc Sod:
The Structural Effects Of Dimerization
pdb|2AF2|A Chain A, Solution Structure Of Disulfide Reduced And Copper
Depleted Human Superoxide Dismutase
pdb|2AF2|B Chain B, Solution Structure Of Disulfide Reduced And Copper
Depleted Human Superoxide Dismutase
pdb|2LU5|A Chain A, Structure And Chemical Shifts Of Cu(I),Zn(Ii) Superoxide
Dismutase By Solid-State Nmr
Length = 153
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 59/79 (74%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+G + I D V+SL G +I+GR +VVHEKADDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDL 126
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 127 GKGGNEESTKTGNAGSRLA 145
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 47/70 (67%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AVA+L G V+G + F Q + GPV + G+I GLT G HGFH+HE GD + GC S GPH
Sbjct: 4 AVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPH 63
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 64 FNP---LSRK 70
>pdb|1N19|A Chain A, Structure Of The Hsod A4v Mutant
pdb|1N19|B Chain B, Structure Of The Hsod A4v Mutant
Length = 154
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 59/79 (74%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+G + I D V+SL G +I+GR +VVHEKADDL
Sbjct: 68 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDL 127
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 128 GKGGNEESTKTGNAGSRLA 146
Score = 69.7 bits (169), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 46/69 (66%), Gaps = 4/69 (5%)
Query: 123 VAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPHY 181
VA+L G V+G + F Q + GPV + G+I GLT G HGFH+HE GD + GC S GPH+
Sbjct: 6 VAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHF 65
Query: 182 NPFNIMSRK 190
NP +SRK
Sbjct: 66 NP---LSRK 71
>pdb|1N18|A Chain A, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|B Chain B, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|C Chain C, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|D Chain D, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|E Chain E, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|F Chain F, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|G Chain G, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|H Chain H, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|I Chain I, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|J Chain J, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
Length = 154
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 59/79 (74%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+G + I D V+SL G +I+GR +VVHEKADDL
Sbjct: 68 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDL 127
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 128 GKGGNEESTKTGNAGSRLA 146
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 47/70 (67%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AVA+L G V+G + F Q + GPV + G+I GLT G HGFH+HE GD + GC S GPH
Sbjct: 5 AVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPH 64
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 65 FNP---LSRK 71
>pdb|3GQF|A Chain A, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|B Chain B, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|C Chain C, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|D Chain D, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|E Chain E, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|F Chain F, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3K91|A Chain A, Polysulfane Bridge In Cu-Zn Superoxide Dismutase
pdb|3K91|B Chain B, Polysulfane Bridge In Cu-Zn Superoxide Dismutase
Length = 153
Score = 99.0 bits (245), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 58/79 (73%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+G + I D V+SL G I+GR +VVHEKADDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 126
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 127 GKGGNEESTKTGNAGSRLA 145
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L G V+G + F Q + GPV + G+I GLT G HGF + E GD + GC S GPH
Sbjct: 4 AVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFRVQEFGDNTAGCTSAGPH 63
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 64 FNP---LSRK 70
>pdb|2NNX|A Chain A, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
pdb|2NNX|B Chain B, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
pdb|2NNX|C Chain C, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
pdb|2NNX|D Chain D, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
Length = 154
Score = 99.0 bits (245), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 58/79 (73%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+G + I D V+SL G I+GR +VVHEKADDL
Sbjct: 68 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 127
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 128 GKGGNEESTKTGNAGSRLA 146
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L G V+G + F Q + GPV + G+I GLT G HGF + E GD + GC S GPH
Sbjct: 5 AVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFRVQEFGDNTAGCTSAGPH 64
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 65 FNP---LSRK 71
>pdb|4B3E|A Chain A, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|B Chain B, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|C Chain C, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|D Chain D, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|E Chain E, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|F Chain F, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|G Chain G, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|H Chain H, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|I Chain I, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|J Chain J, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate
Length = 154
Score = 99.0 bits (245), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 58/79 (73%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+G + I D V+SL G I+GR +VVHEKADDL
Sbjct: 68 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 127
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 128 GKGGNEESTKTGNAGSRLA 146
Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L G V+G + F Q + GPV + G+I GLT G HGFH+HE GD + GC S GPH
Sbjct: 5 AVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPH 64
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 65 FNP---LSRK 71
>pdb|2WYT|A Chain A, 1.0 A Resolution Structure Of L38v Sod1 Mutant
pdb|2WYT|F Chain F, 1.0 A Resolution Structure Of L38v Sod1 Mutant
pdb|2WZ0|A Chain A, L38v Sod1 Mutant Complexed With Aniline.
pdb|2WZ0|F Chain F, L38v Sod1 Mutant Complexed With Aniline.
pdb|2WZ5|A Chain A, L38v Sod1 Mutant Complexed With L-Methionine.
pdb|2WZ5|F Chain F, L38v Sod1 Mutant Complexed With L-Methionine
Length = 153
Score = 99.0 bits (245), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 58/79 (73%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+G + I D V+SL G I+GR +VVHEKADDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 126
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 127 GKGGNEESTKTGNAGSRLA 145
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L G V+G + F Q + GPV + G+I G+T G HGFH+HE GD + GC S GPH
Sbjct: 4 AVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGVTEGLHGFHVHEFGDNTAGCTSAGPH 63
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 64 FNP---LSRK 70
>pdb|1OEZ|W Chain W, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OEZ|X Chain X, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OEZ|Y Chain Y, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OEZ|Z Chain Z, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OZT|M Chain M, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|N Chain N, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|G Chain G, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|H Chain H, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|K Chain K, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|L Chain L, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|I Chain I, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|J Chain J, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
Length = 153
Score = 99.0 bits (245), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 58/79 (73%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+G + I D V+SL G I+GR +VVHEKADDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 126
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 127 GKGGNEESTKTGNAGSRLA 145
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L G V+G + F Q + GPV + G+I GLT G HGF +HE GD + GC S GPH
Sbjct: 4 AVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFRVHEFGDNTAGCTSAGPH 63
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 64 FNP---LSRK 70
>pdb|1HL4|A Chain A, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL4|B Chain B, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL4|C Chain C, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL4|D Chain D, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1SPD|A Chain A, Amyotrophic Lateral Sclerosis And Structural Defects In
Cu,Zn Superoxide Dismutase
pdb|1SPD|B Chain B, Amyotrophic Lateral Sclerosis And Structural Defects In
Cu,Zn Superoxide Dismutase
Length = 154
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 58/79 (73%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+G + I D V+SL G I+GR +VVHEKADDL
Sbjct: 68 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 127
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 128 GKGGNEESTKTGNAGSRLA 146
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L G V+G + F Q + GPV + G+I GLT G HGFH+HE GD + GC S GPH
Sbjct: 5 AVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPH 64
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 65 FNP---LSRK 71
>pdb|1HL5|A Chain A, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|B Chain B, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|C Chain C, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|D Chain D, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|E Chain E, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|F Chain F, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|G Chain G, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|H Chain H, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|I Chain I, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|J Chain J, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|K Chain K, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|L Chain L, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|M Chain M, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|N Chain N, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|O Chain O, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|P Chain P, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|Q Chain Q, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|S Chain S, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1PU0|A Chain A, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|B Chain B, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|C Chain C, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|D Chain D, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|E Chain E, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|F Chain F, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|G Chain G, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|H Chain H, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|I Chain I, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|J Chain J, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|2C9U|A Chain A, 1.24 Angstroms Resolution Structure Of As-Isolated Cu-Zn
Human Superoxide Dismutase
pdb|2C9U|F Chain F, 1.24 Angstroms Resolution Structure Of As-Isolated Cu-Zn
Human Superoxide Dismutase
pdb|2C9V|A Chain A, Atomic Resolution Structure Of Cu-Zn Human Superoxide
Dismutase
pdb|2C9V|F Chain F, Atomic Resolution Structure Of Cu-Zn Human Superoxide
Dismutase
pdb|2V0A|A Chain A, Atomic Resolution Crystal Structure Of Human Superoxide
Dismutase
pdb|2V0A|F Chain F, Atomic Resolution Crystal Structure Of Human Superoxide
Dismutase
pdb|3ECU|A Chain A, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3ECU|B Chain B, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3ECU|C Chain C, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3ECU|D Chain D, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3KH3|A Chain A, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|B Chain B, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|C Chain C, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|D Chain D, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|E Chain E, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|F Chain F, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|G Chain G, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|H Chain H, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|I Chain I, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|J Chain J, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|K Chain K, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|L Chain L, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH4|A Chain A, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|B Chain B, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|C Chain C, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|D Chain D, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|E Chain E, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|F Chain F, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3RE0|A Chain A, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
pdb|3RE0|B Chain B, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
pdb|3RE0|C Chain C, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
pdb|3RE0|D Chain D, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
Length = 153
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 58/79 (73%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+G + I D V+SL G I+GR +VVHEKADDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 126
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 127 GKGGNEESTKTGNAGSRLA 145
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L G V+G + F Q + GPV + G+I GLT G HGFH+HE GD + GC S GPH
Sbjct: 4 AVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPH 63
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 64 FNP---LSRK 70
>pdb|4BCY|A Chain A, Monomeric Human Cu,zn Superoxide Dismutase, Mutation H43f
Length = 153
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 58/79 (73%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+G + I D V+SL G I+GR +VVHEKADDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHAIIGRTLVVHEKADDL 126
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 127 GKGGNEESTKTGNAGSRLA 145
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AVA+L G V+G + F Q + GPV + G+I GLT G GFH+HE+ D + GC S GPH
Sbjct: 4 AVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLFGFHVHEEEDNTAGCTSAGPH 63
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 64 FNP---LSRK 70
>pdb|1UXM|A Chain A, A4v Mutant Of Human Sod1
pdb|1UXM|B Chain B, A4v Mutant Of Human Sod1
pdb|1UXM|C Chain C, A4v Mutant Of Human Sod1
pdb|1UXM|D Chain D, A4v Mutant Of Human Sod1
pdb|1UXM|E Chain E, A4v Mutant Of Human Sod1
pdb|1UXM|F Chain F, A4v Mutant Of Human Sod1
pdb|1UXM|G Chain G, A4v Mutant Of Human Sod1
pdb|1UXM|H Chain H, A4v Mutant Of Human Sod1
pdb|1UXM|I Chain I, A4v Mutant Of Human Sod1
pdb|1UXM|J Chain J, A4v Mutant Of Human Sod1
pdb|1UXM|K Chain K, A4v Mutant Of Human Sod1
pdb|1UXM|L Chain L, A4v Mutant Of Human Sod1
Length = 153
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 58/79 (73%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+G + I D V+SL G I+GR +VVHEKADDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 126
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 127 GKGGNEESTKTGNAGSRLA 145
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 45/69 (65%), Gaps = 4/69 (5%)
Query: 123 VAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPHY 181
V +L G V+G + F Q + GPV + G+I GLT G HGFH+HE GD + GC S GPH+
Sbjct: 5 VCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHF 64
Query: 182 NPFNIMSRK 190
NP +SRK
Sbjct: 65 NP---LSRK 70
>pdb|3GZQ|A Chain A, Human Sod1 A4v Metal-Free Variant
pdb|3GZQ|B Chain B, Human Sod1 A4v Metal-Free Variant
Length = 154
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 58/79 (73%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+G + I D V+SL G I+GR +VVHEKADDL
Sbjct: 68 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 127
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 128 GKGGNEESTKTGNAGSRLA 146
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 45/69 (65%), Gaps = 4/69 (5%)
Query: 123 VAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPHY 181
V +L G V+G + F Q + GPV + G+I GLT G HGFH+HE GD + GC S GPH+
Sbjct: 6 VCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHF 65
Query: 182 NPFNIMSRK 190
NP +SRK
Sbjct: 66 NP---LSRK 71
>pdb|1AZV|A Chain A, Familial Als Mutant G37r Cuznsod (Human)
pdb|1AZV|B Chain B, Familial Als Mutant G37r Cuznsod (Human)
Length = 153
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 58/79 (73%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+G + I D V+SL G I+GR +VVHEKADDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 126
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 127 GKGGNEESTKTGNAGSRLA 145
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L G V+G + F Q + GPV + G+I LT G HGFH+HE GD + GC S GPH
Sbjct: 4 AVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKRLTEGLHGFHVHEFGDNTAGCTSAGPH 63
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 64 FNP---LSRK 70
>pdb|2XJK|A Chain A, Monomeric Human Cu,Zn Superoxide Dismutase
Length = 153
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 58/79 (73%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+G + I D V+SL G I+GR +VVHEKADDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHAIIGRTLVVHEKADDL 126
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 127 GKGGNEESTKTGNAGSRLA 145
Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 47/70 (67%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AVA+L G V+G + F Q + GPV + G+I GLT G HGFH+HE+ D + GC S GPH
Sbjct: 4 AVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSAGPH 63
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 64 FNP---LSRK 70
>pdb|3ECW|A Chain A, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECW|B Chain B, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECW|C Chain C, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECW|D Chain D, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
Length = 153
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 58/79 (73%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+G + I D V+SL G I+GR +VVHEKADDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 126
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 127 GKGGNEESTKTGNAGSRLA 145
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 45/70 (64%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L G V+G + F Q + GPV + G+I GLT G HGFH+HE GD GC S GPH
Sbjct: 4 AVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNRAGCTSAGPH 63
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 64 FNP---LSRK 70
>pdb|2GBT|A Chain A, C6aC111A CUZN SUPEROXIDE DISMUTASE
pdb|2GBT|B Chain B, C6aC111A CUZN SUPEROXIDE DISMUTASE
pdb|2GBT|C Chain C, C6aC111A CUZN SUPEROXIDE DISMUTASE
pdb|2GBT|D Chain D, C6aC111A CUZN SUPEROXIDE DISMUTASE
Length = 153
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 58/79 (73%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+G + I D V+SL G I+GR +VVHEKADDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHAIIGRTLVVHEKADDL 126
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 127 GKGGNEESTKTGNAGSRLA 145
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 47/70 (67%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AVA+L G V+G + F Q + GPV + G+I GLT G HGFH+HE GD + GC S GPH
Sbjct: 4 AVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPH 63
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 64 FNP---LSRK 70
>pdb|2GBU|A Chain A, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBU|B Chain B, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBU|C Chain C, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBU|D Chain D, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBV|A Chain A, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|B Chain B, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|C Chain C, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|D Chain D, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|E Chain E, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|F Chain F, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|G Chain G, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|H Chain H, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|I Chain I, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|J Chain J, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
Length = 153
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 58/79 (73%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+G + I D V+SL G I+GR +VVHEKADDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHAIIGRTLVVHEKADDL 126
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 127 GKGGNEESTKTGNAGSRLA 145
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AVA+L G V+G + F Q + GPV + G+I GLT G HGFH+HE GD + G S GPH
Sbjct: 4 AVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGATSAGPH 63
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 64 FNP---LSRK 70
>pdb|2C9S|A Chain A, 1.24 Angstroms Resolution Structure Of Zn-Zn Human
Superoxide Dismutase
pdb|2C9S|F Chain F, 1.24 Angstroms Resolution Structure Of Zn-Zn Human
Superoxide Dismutase
pdb|3T5W|A Chain A, 2me Modified Human Sod1
pdb|3T5W|B Chain B, 2me Modified Human Sod1
pdb|3T5W|D Chain D, 2me Modified Human Sod1
pdb|3T5W|E Chain E, 2me Modified Human Sod1
pdb|3T5W|F Chain F, 2me Modified Human Sod1
pdb|3T5W|G Chain G, 2me Modified Human Sod1
pdb|3T5W|H Chain H, 2me Modified Human Sod1
pdb|3T5W|I Chain I, 2me Modified Human Sod1
pdb|3T5W|J Chain J, 2me Modified Human Sod1
pdb|3T5W|K Chain K, 2me Modified Human Sod1
pdb|3T5W|L Chain L, 2me Modified Human Sod1
pdb|3T5W|M Chain M, 2me Modified Human Sod1
Length = 153
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 58/79 (73%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+G + I D V+SL G I+GR +VVHEKADDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVVHEKADDL 126
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 127 GKGGNEESTKTGNAGSRLA 145
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L G V+G + F Q + GPV + G+I GLT G HGFH+HE GD + GC S GPH
Sbjct: 4 AVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPH 63
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 64 FNP---LSRK 70
>pdb|3LTV|A Chain A, Mouse-Human Sod1 Chimera
pdb|3LTV|B Chain B, Mouse-Human Sod1 Chimera
pdb|3LTV|C Chain C, Mouse-Human Sod1 Chimera
pdb|3LTV|D Chain D, Mouse-Human Sod1 Chimera
pdb|3LTV|E Chain E, Mouse-Human Sod1 Chimera
pdb|3LTV|F Chain F, Mouse-Human Sod1 Chimera
Length = 153
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/75 (62%), Positives = 57/75 (76%)
Query: 16 HGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDLGRGD 75
HG P D +RH GDLG++TADK+G + I D V+SL G I+GR +VVHEKADDLG+G
Sbjct: 71 HGGPADEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGG 130
Query: 76 NAESVKTGNAGARLA 90
N ES KTGNAG+RLA
Sbjct: 131 NEESTKTGNAGSRLA 145
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 120 IMAVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMG 178
+ AV +L G V+GT+ F Q PV++SG ITGLT G HGFH+H+ GD +QGC S G
Sbjct: 2 MKAVCVLKGDGPVQGTIHFEQKASGEPVVLSGQITGLTEGQHGFHVHQYGDNTQGCTSAG 61
Query: 179 PHYNPFN 185
PH+NP +
Sbjct: 62 PHFNPHS 68
>pdb|2WYZ|A Chain A, L38v Sod1 Mutant Complexed With Ump
pdb|2WYZ|F Chain F, L38v Sod1 Mutant Complexed With Ump
Length = 153
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 58/79 (73%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+G + I D V+SL G I+GR +VVHEKADDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVVHEKADDL 126
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 127 GKGGNEESTKTGNAGSRLA 145
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L G V+G + F Q + GPV + G+I G+T G HGFH+HE GD + GC S GPH
Sbjct: 4 AVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGVTEGLHGFHVHEFGDNTAGCTSAGPH 63
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 64 FNP---LSRK 70
>pdb|1MFM|A Chain A, Monomeric Human Sod Mutant F50eG51EE133Q AT ATOMIC
Resolution
pdb|1KMG|A Chain A, The Solution Structure Of Monomeric Copper-Free Superoxide
Dismutase
pdb|1RK7|A Chain A, Solution Structure Of Apo Cu,Zn Superoxide Dismutase: Role
Of Metal Ions In Protein Folding
Length = 153
Score = 98.2 bits (243), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 59/79 (74%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+G + I D V+SL G +I+GR +VVHEKADDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDL 126
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N +S KTGNAG+RLA
Sbjct: 127 GKGGNEQSTKTGNAGSRLA 145
Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 47/70 (67%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AVA+L G V+G + F Q + GPV + G+I GLT G HGFH+HE+ D + GC S GPH
Sbjct: 4 AVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSAGPH 63
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 64 FNP---LSRK 70
>pdb|1BA9|A Chain A, The Solution Structure Of Reduced Monomeric Superoxide
Dismutase, Nmr, 36 Structures
Length = 153
Score = 98.2 bits (243), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 59/79 (74%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+G + I D V+SL G +I+GR +VVHEKADDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDL 126
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N +S KTGNAG+RLA
Sbjct: 127 GKGGNEQSTKTGNAGSRLA 145
Score = 70.5 bits (171), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 47/70 (67%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AVA+L G V+G + F Q + GPV + G+I GLT G HGFH+HE+ D + GC S GPH
Sbjct: 4 AVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSAGPH 63
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 64 FNP---LSRK 70
>pdb|1UXL|A Chain A, I113t Mutant Of Human Sod1
pdb|1UXL|B Chain B, I113t Mutant Of Human Sod1
pdb|1UXL|C Chain C, I113t Mutant Of Human Sod1
pdb|1UXL|D Chain D, I113t Mutant Of Human Sod1
pdb|1UXL|E Chain E, I113t Mutant Of Human Sod1
pdb|1UXL|F Chain F, I113t Mutant Of Human Sod1
pdb|1UXL|G Chain G, I113t Mutant Of Human Sod1
pdb|1UXL|H Chain H, I113t Mutant Of Human Sod1
pdb|1UXL|I Chain I, I113t Mutant Of Human Sod1
pdb|1UXL|J Chain J, I113t Mutant Of Human Sod1
pdb|3ECV|A Chain A, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECV|B Chain B, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECV|C Chain C, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECV|D Chain D, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|4A7G|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With 4-
Methylpiperazin-1-Yl)quinazoline In The P21 Space Group.
pdb|4A7Q|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With 4-(4-
Methyl-1,4-Diazepan-1-Yl)quinazoline In The P21 Space
Group.
pdb|4A7Q|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With 4-(4-
Methyl-1,4-Diazepan-1-Yl)quinazoline In The P21 Space
Group.
pdb|4A7S|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With 5-
Fluorouridine In The P21 Space Group
pdb|4A7S|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With 5-
Fluorouridine In The P21 Space Group
pdb|4A7T|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With
Isoproteranol In The P21 Space Group
pdb|4A7T|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With
Isoproteranol In The P21 Space Group
pdb|4A7U|A Chain A, Structure Of Human I113t Sod1 Complexed With Adrenaline In
The P21 Space Group.
pdb|4A7U|F Chain F, Structure Of Human I113t Sod1 Complexed With Adrenaline In
The P21 Space Group.
pdb|4A7V|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With
Dopamine In The P21 Space Group
pdb|4A7V|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With
Dopamine In The P21 Space Group
Length = 153
Score = 97.8 bits (242), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 57/79 (72%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+G + I D V+SL G I GR +VVHEKADDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCITGRTLVVHEKADDL 126
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 127 GKGGNEESTKTGNAGSRLA 145
Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L G V+G + F Q + GPV + G+I GLT G HGFH+HE GD + GC S GPH
Sbjct: 4 AVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPH 63
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 64 FNP---LSRK 70
>pdb|1FUN|A Chain A, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|F Chain F, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|B Chain B, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|G Chain G, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|C Chain C, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|H Chain H, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|D Chain D, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|I Chain I, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|E Chain E, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|J Chain J, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
Length = 153
Score = 97.8 bits (242), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 59/79 (74%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+G + I D V+SL G +I+GR +VVHEKADDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDL 126
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES +TGNAG+RLA
Sbjct: 127 GKGGNEESTETGNAGSRLA 145
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 47/70 (67%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AVA+L G V+G + F Q + GPV + G+I GLT G HGFH+HE GD + GC S GPH
Sbjct: 4 AVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPH 63
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 64 FNP---LSRK 70
>pdb|1Q0E|A Chain A, Atomic Resolution (1.15 ) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase
pdb|1Q0E|B Chain B, Atomic Resolution (1.15 ) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase
pdb|2SOD|O Chain O, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
pdb|2SOD|Y Chain Y, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
pdb|2SOD|B Chain B, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
pdb|2SOD|G Chain G, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
Length = 152
Score = 97.1 bits (240), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 58/79 (73%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADKNG + I D ++SL G +I+GR +VVHEK DDL
Sbjct: 66 LSKKHGGPKDEERHVGDLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDL 125
Query: 72 GRGDNAESVKTGNAGARLA 90
GRG N ES KTGNAG+RLA
Sbjct: 126 GRGGNEESTKTGNAGSRLA 144
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L G V+GT+ F V+++G+ITGLT GDHGFH+H+ GD +QGC S GPH
Sbjct: 5 AVCVLKGDGPVQGTIHFEAKGDT--VVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPH 62
Query: 181 YNPFN 185
+NP +
Sbjct: 63 FNPLS 67
>pdb|1OZU|A Chain A, Crystal Structure Of Familial Als Mutant S134n Of Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 1.3a Resolution
pdb|1OZU|B Chain B, Crystal Structure Of Familial Als Mutant S134n Of Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 1.3a Resolution
Length = 153
Score = 97.1 bits (240), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 58/79 (73%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+G + I D V+SL G I+GR +VVHEKADDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVVHEKADDL 126
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N E+ KTGNAG+RLA
Sbjct: 127 GKGGNEENTKTGNAGSRLA 145
Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L G V+G + F Q + GPV + G+I GLT G HGFH+HE GD + GC S GPH
Sbjct: 4 AVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPH 63
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 64 FNP---LSRK 70
>pdb|1COB|A Chain A, Crystal Structure Solution And Refinement Of The
Semisynthetic Cobalt Substituted Bovine Erythrocyte
Enzyme Superoxide Dismutase At 2.0 Angstroms Resolution
pdb|1COB|B Chain B, Crystal Structure Solution And Refinement Of The
Semisynthetic Cobalt Substituted Bovine Erythrocyte
Enzyme Superoxide Dismutase At 2.0 Angstroms Resolution
pdb|1SXA|A Chain A, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXA|B Chain B, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXB|A Chain A, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXB|B Chain B, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXC|A Chain A, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXC|B Chain B, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXN|A Chain A, Reduced Bovine Superoxide Dismutase At Ph 5.0
pdb|1SXN|B Chain B, Reduced Bovine Superoxide Dismutase At Ph 5.0
pdb|1SXS|A Chain A, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Thiocyanate
pdb|1SXS|B Chain B, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Thiocyanate
pdb|1SXZ|A Chain A, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Azide
pdb|1SXZ|B Chain B, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Azide
pdb|1CBJ|A Chain A, Crystal Structure Of Bovine Superoxide Dismutase Crystal.
pdb|1CBJ|B Chain B, Crystal Structure Of Bovine Superoxide Dismutase Crystal.
pdb|2AEO|A Chain A, Crystal Structure Of Cisplatinated Bovine Cu,Zn Superoxide
Dismutase
pdb|2AEO|B Chain B, Crystal Structure Of Cisplatinated Bovine Cu,Zn Superoxide
Dismutase
pdb|2Z7U|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7U|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7W|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7W|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Y|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Y|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Z|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Z|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2ZOW|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2ZOW|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|3HW7|A Chain A, High Pressure (0.57 Gpa) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase At 2.0 Angstroms
pdb|3HW7|B Chain B, High Pressure (0.57 Gpa) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase At 2.0 Angstroms
Length = 151
Score = 97.1 bits (240), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 58/79 (73%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADKNG + I D ++SL G +I+GR +VVHEK DDL
Sbjct: 65 LSKKHGGPKDEERHVGDLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDL 124
Query: 72 GRGDNAESVKTGNAGARLA 90
GRG N ES KTGNAG+RLA
Sbjct: 125 GRGGNEESTKTGNAGSRLA 143
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L G V+GT+ F V+++G+ITGLT GDHGFH+H+ GD +QGC S GPH
Sbjct: 4 AVCVLKGDGPVQGTIHFEAKGDT--VVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPH 61
Query: 181 YNPFN 185
+NP +
Sbjct: 62 FNPLS 66
>pdb|3GZP|A Chain A, Human Sod1 G93a Metal-Free Variant
pdb|3GZP|B Chain B, Human Sod1 G93a Metal-Free Variant
pdb|3GZP|C Chain C, Human Sod1 G93a Metal-Free Variant
pdb|3GZP|D Chain D, Human Sod1 G93a Metal-Free Variant
pdb|2WZ6|A Chain A, G93a Sod1 Mutant Complexed With Quinazoline.
pdb|2WZ6|F Chain F, G93a Sod1 Mutant Complexed With Quinazoline
Length = 153
Score = 97.1 bits (240), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 57/79 (72%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+ + I D V+SL G I+GR +VVHEKADDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDAVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 126
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 127 GKGGNEESTKTGNAGSRLA 145
Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L G V+G + F Q + GPV + G+I GLT G HGFH+HE GD + GC S GPH
Sbjct: 4 AVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPH 63
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 64 FNP---LSRK 70
>pdb|3GZO|A Chain A, Human Sod1 G93a Variant
pdb|3GZO|B Chain B, Human Sod1 G93a Variant
pdb|3GZO|C Chain C, Human Sod1 G93a Variant
pdb|3GZO|D Chain D, Human Sod1 G93a Variant
pdb|3GZO|E Chain E, Human Sod1 G93a Variant
pdb|3GZO|F Chain F, Human Sod1 G93a Variant
pdb|3GZO|G Chain G, Human Sod1 G93a Variant
pdb|3GZO|H Chain H, Human Sod1 G93a Variant
pdb|3GZO|I Chain I, Human Sod1 G93a Variant
pdb|3GZO|J Chain J, Human Sod1 G93a Variant
pdb|2WKO|A Chain A, Structure Of Metal Loaded Pathogenic Sod1 Mutant G93a
Length = 154
Score = 97.1 bits (240), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 57/79 (72%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+ + I D V+SL G I+GR +VVHEKADDL
Sbjct: 68 LSRKHGGPKDEERHVGDLGNVTADKDAVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 127
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 128 GKGGNEESTKTGNAGSRLA 146
Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L G V+G + F Q + GPV + G+I GLT G HGFH+HE GD + GC S GPH
Sbjct: 5 AVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPH 64
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 65 FNP---LSRK 71
>pdb|3SOD|O Chain O, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
pdb|3SOD|Y Chain Y, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
pdb|3SOD|G Chain G, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
pdb|3SOD|B Chain B, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
Length = 152
Score = 97.1 bits (240), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 58/79 (73%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADKNG + I D ++SL G +I+GR +VVHEK DDL
Sbjct: 66 LSKKHGGPKDEERHVGDLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDL 125
Query: 72 GRGDNAESVKTGNAGARLA 90
GRG N ES KTGNAG+RLA
Sbjct: 126 GRGGNEESTKTGNAGSRLA 144
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 3/65 (4%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AVA+L G V+GT+ F V+++G+ITGLT GDHGFH+H+ GD +QGC S GPH
Sbjct: 5 AVAVLKGDGPVQGTIHFEAKGDT--VVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPH 62
Query: 181 YNPFN 185
+NP +
Sbjct: 63 FNPLS 67
>pdb|2ZKY|A Chain A, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|B Chain B, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|C Chain C, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|D Chain D, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|E Chain E, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|F Chain F, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|G Chain G, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|H Chain H, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|I Chain I, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|J Chain J, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
Length = 159
Score = 96.7 bits (239), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 57/79 (72%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+ + I D V+SL G I+GR +VVHEKADDL
Sbjct: 73 LSRKHGGPKDEERHVGDLGNVTADKDAVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 132
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 133 GKGGNEESTKTGNAGSRLA 151
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L G V+G + F Q + GPV + G+I GLT G HGFH+HE GD + GC S GPH
Sbjct: 10 AVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPH 69
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 70 FNP---LSRK 76
>pdb|1SDA|O Chain O, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
pdb|1SDA|Y Chain Y, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
pdb|1SDA|B Chain B, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
pdb|1SDA|G Chain G, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
Length = 152
Score = 96.7 bits (239), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 58/79 (73%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADKNG + I D ++SL G +I+GR +VVHEK DDL
Sbjct: 66 LSKKHGGPKDEERHVGDLGNVTADKNGVAIVDIVDPLISLSGEXSIIGRTMVVHEKPDDL 125
Query: 72 GRGDNAESVKTGNAGARLA 90
GRG N ES KTGNAG+RLA
Sbjct: 126 GRGGNEESTKTGNAGSRLA 144
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L G V+GT+ F V+++G+ITGLT GDHGFH+H+ GD +QGC S GPH
Sbjct: 5 AVCVLKGDGPVQGTIHFEAKGDT--VVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPH 62
Query: 181 YNPFN 185
+NP +
Sbjct: 63 FNPLS 67
>pdb|2WKO|F Chain F, Structure Of Metal Loaded Pathogenic Sod1 Mutant G93a
Length = 154
Score = 96.7 bits (239), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 57/79 (72%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+ + I D V+SL G I+GR +VVHEKADDL
Sbjct: 68 LSRKHGGPKDEERHVGDLGNVTADKDAVADVSIEDSVISLSGDHXIIGRTLVVHEKADDL 127
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 128 GKGGNEESTKTGNAGSRLA 146
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L G V+G + F Q + GPV + G+I GLT G HGFH+HE GD + GC S GPH
Sbjct: 5 AVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPH 64
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 65 FNP---LSRK 71
>pdb|1CB4|A Chain A, Crystal Structure Of Copper, Zinc Superoxide Dismutase
pdb|1CB4|B Chain B, Crystal Structure Of Copper, Zinc Superoxide Dismutase
Length = 151
Score = 96.3 bits (238), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 58/79 (73%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADKNG + I D ++SL G +I+GR +VVHEK DDL
Sbjct: 65 LSKKHGGPKDDERHVGDLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDL 124
Query: 72 GRGDNAESVKTGNAGARLA 90
GRG N ES KTGNAG+RLA
Sbjct: 125 GRGGNEESTKTGNAGSRLA 143
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L G V+GT+ F V+++G+ITGLT GDHGFH+H+ GD +QGC S GPH
Sbjct: 4 AVCVLKGDGPVQGTIHFEAKGDT--VVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPH 61
Query: 181 YNPFN 185
+NP +
Sbjct: 62 FNPLS 66
>pdb|3GTV|A Chain A, Human-Mouse Sod1 Chimera
pdb|3GTV|B Chain B, Human-Mouse Sod1 Chimera
pdb|3GTV|C Chain C, Human-Mouse Sod1 Chimera
pdb|3GTV|D Chain D, Human-Mouse Sod1 Chimera
pdb|3GTV|E Chain E, Human-Mouse Sod1 Chimera
pdb|3GTV|F Chain F, Human-Mouse Sod1 Chimera
pdb|3GTV|G Chain G, Human-Mouse Sod1 Chimera
pdb|3GTV|H Chain H, Human-Mouse Sod1 Chimera
pdb|3GTV|I Chain I, Human-Mouse Sod1 Chimera
pdb|3GTV|J Chain J, Human-Mouse Sod1 Chimera
pdb|3GTV|K Chain K, Human-Mouse Sod1 Chimera
pdb|3GTV|L Chain L, Human-Mouse Sod1 Chimera
Length = 153
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 58/79 (73%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TA K+G ++ I D V+SL G +I+GR +VVHEK DDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTAGKDGVANVSIEDRVISLSGEHSIIGRTMVVHEKQDDL 126
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 127 GKGGNEESTKTGNAGSRLA 145
Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L G V+G + F Q + GPV + G+I GLT G HGFH+HE GD + GC S GPH
Sbjct: 4 AVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPH 63
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 64 FNP---LSRK 70
>pdb|4A7G|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With 4-
Methylpiperazin-1-Yl)quinazoline In The P21 Space Group
Length = 153
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 56/79 (70%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+G + D V+SL G I GR +VVHEKADDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSTEDSVISLSGDHCITGRTLVVHEKADDL 126
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 127 GKGGNEESTKTGNAGSRLA 145
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L G V+G + F Q + GPV + G+I GLT G HGFH+HE GD + GC S GPH
Sbjct: 4 AVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPH 63
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 64 FNP---LSRK 70
>pdb|3H2Q|A Chain A, Human Sod1 H80r Variant, P21 Crystal Form
pdb|3H2Q|B Chain B, Human Sod1 H80r Variant, P21 Crystal Form
pdb|3H2Q|C Chain C, Human Sod1 H80r Variant, P21 Crystal Form
pdb|3H2Q|D Chain D, Human Sod1 H80r Variant, P21 Crystal Form
Length = 153
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 57/79 (72%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +R GDLG++TADK+G + I D V+SL G I+GR +VVHEKADDL
Sbjct: 67 LSRKHGGPKDEERRVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 126
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 127 GKGGNEESTKTGNAGSRLA 145
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L G V+G + F Q + GPV + G+I GLT G HGFH+HE GD + GC S GPH
Sbjct: 4 AVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPH 63
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 64 FNP---LSRK 70
>pdb|2XJL|A Chain A, Monomeric Human Cu,Zn Superoxide Dismutase Without Cu
Ligands
Length = 153
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 57/79 (72%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+G + I D V+SL G I+GR +VV EKADDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHAIIGRTLVVSEKADDL 126
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 127 GKGGNEESTKTGNAGSRLA 145
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AVA+L G V+G + F Q + GPV + G+I GLT G HGF + E+ D + GC S GPH
Sbjct: 4 AVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFSVSEEEDNTAGCTSAGPH 63
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 64 FNP---LSRK 70
>pdb|2VR7|A Chain A, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.58 A Resolution
pdb|2VR7|F Chain F, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.58 A Resolution
Length = 154
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 57/79 (72%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDL ++TADK+G + I D V+SL G I+GR +VVHEKADDL
Sbjct: 68 LSRKHGGPKDEERHVGDLRNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 127
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 128 GKGGNEESTKTGNAGSRLA 146
Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L G V+G + F Q + GPV + G+I GLT G HGFH+HE GD + GC S GPH
Sbjct: 5 AVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPH 64
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 65 FNP---LSRK 71
>pdb|2VR6|A Chain A, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.3 A Resolution
pdb|2VR6|F Chain F, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.3 A Resolution
pdb|3CQP|A Chain A, Human Sod1 G85r Variant, Structure I
pdb|3CQP|B Chain B, Human Sod1 G85r Variant, Structure I
pdb|3CQP|C Chain C, Human Sod1 G85r Variant, Structure I
pdb|3CQP|D Chain D, Human Sod1 G85r Variant, Structure I
Length = 153
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 57/79 (72%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDL ++TADK+G + I D V+SL G I+GR +VVHEKADDL
Sbjct: 67 LSRKHGGPKDEERHVGDLRNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 126
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 127 GKGGNEESTKTGNAGSRLA 145
Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L G V+G + F Q + GPV + G+I GLT G HGFH+HE GD + GC S GPH
Sbjct: 4 AVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPH 63
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 64 FNP---LSRK 70
>pdb|3GTT|A Chain A, Mouse Sod1
pdb|3GTT|B Chain B, Mouse Sod1
pdb|3GTT|C Chain C, Mouse Sod1
pdb|3GTT|D Chain D, Mouse Sod1
pdb|3GTT|E Chain E, Mouse Sod1
pdb|3GTT|F Chain F, Mouse Sod1
Length = 153
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 16 HGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDLGRGD 75
HG P D +RH GDLG++TA K+G ++ I D V+SL G +I+GR +VVHEK DDLG+G
Sbjct: 71 HGGPADEERHVGDLGNVTAGKDGVANVSIEDRVISLSGEHSIIGRTMVVHEKQDDLGKGG 130
Query: 76 NAESVKTGNAGARLA 90
N ES KTGNAG+RLA
Sbjct: 131 NEESTKTGNAGSRLA 145
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 120 IMAVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMG 178
+ AV +L G V+GT+ F Q PV++SG ITGLT G HGFH+H+ GD +QGC S G
Sbjct: 2 MKAVCVLKGDGPVQGTIHFEQKASGEPVVLSGQITGLTEGQHGFHVHQYGDNTQGCTSAG 61
Query: 179 PHYNPFN 185
PH+NP +
Sbjct: 62 PHFNPHS 68
>pdb|1E9P|A Chain A, Crystal Structure Of Bovine Cu, Zn Sod To 1.7 Angstrom (3
Of 3)
Length = 151
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 58/79 (73%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P+D +RH GDLG++TAD NG + I D ++SL G +I+GR +VVHEK DDL
Sbjct: 65 LSKKHGGPSDEERHVGDLGNVTADSNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDL 124
Query: 72 GRGDNAESVKTGNAGARLA 90
GRG N ES KTGNAG+RLA
Sbjct: 125 GRGGNEESTKTGNAGSRLA 143
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 3/65 (4%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L+G V+GT+ F V+++G+ITGLT GDHGFH+H+ GD +QGC S GPH
Sbjct: 4 AVCVLSGDGPVQGTIHFEAKGDT--VVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPH 61
Query: 181 YNPFN 185
+NP +
Sbjct: 62 FNPLS 66
>pdb|2ZKW|A Chain A, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group P21
pdb|2ZKW|B Chain B, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group P21
pdb|2ZKX|A Chain A, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
pdb|2ZKX|B Chain B, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
pdb|2ZKX|C Chain C, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
pdb|2ZKX|D Chain D, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
Length = 159
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 57/79 (72%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDL ++TADK+G + I D V+SL G I+GR +VVHEKADDL
Sbjct: 73 LSRKHGGPKDEERHVGDLRNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 132
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 133 GKGGNEESTKTGNAGSRLA 151
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L G V+G + F Q + GPV + G+I GLT G HGFH+HE GD + GC S GPH
Sbjct: 10 AVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPH 69
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 70 FNP---LSRK 76
>pdb|3QQD|A Chain A, Human Sod1 H80r Variant, P212121 Crystal Form
pdb|3QQD|B Chain B, Human Sod1 H80r Variant, P212121 Crystal Form
Length = 154
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 57/79 (72%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +R GDLG++TADK+G + I D V+SL G I+GR +VVHEKADDL
Sbjct: 68 LSRKHGGPKDEERRVGDLGNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVVHEKADDL 127
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 128 GKGGNEESTKTGNAGSRLA 146
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L G V+G + F Q + GPV + G+I GLT G HGFH+HE GD + GC S GPH
Sbjct: 5 AVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPH 64
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 65 FNP---LSRK 71
>pdb|1P1V|A Chain A, Crystal Structure Of Fals-Associated Human Copper-Zinc
Superoxide Dismutase (Cuznsod) Mutant D125h To 1.4a
pdb|1P1V|B Chain B, Crystal Structure Of Fals-Associated Human Copper-Zinc
Superoxide Dismutase (Cuznsod) Mutant D125h To 1.4a
pdb|1P1V|C Chain C, Crystal Structure Of Fals-Associated Human Copper-Zinc
Superoxide Dismutase (Cuznsod) Mutant D125h To 1.4a
Length = 153
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 57/79 (72%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+G + I D V+SL G I+GR +VVHEKAD L
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVVHEKADHL 126
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 127 GKGGNEESTKTGNAGSRLA 145
Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L G V+G + F Q + GPV + G+I GLT G HGFH+HE GD + GC S GPH
Sbjct: 4 AVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPH 63
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 64 FNP---LSRK 70
>pdb|2VR8|A Chain A, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.36 A Resolution
pdb|2VR8|F Chain F, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.36 A Resolution
Length = 154
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 57/79 (72%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDL ++TADK+G + I D V+SL G I+GR +VVHEKADDL
Sbjct: 68 LSRKHGGPKDEERHVGDLRNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVVHEKADDL 127
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 128 GKGGNEESTKTGNAGSRLA 146
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L G V+G + F Q + GPV + G+I GLT G HGFH+HE GD + GC S GPH
Sbjct: 5 AVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPH 64
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 65 FNP---LSRK 71
>pdb|3CQQ|A Chain A, Human Sod1 G85r Variant, Structure Ii
pdb|3CQQ|B Chain B, Human Sod1 G85r Variant, Structure Ii
Length = 153
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 57/79 (72%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDL ++TADK+G + I D V+SL G I+GR +VVHEKADDL
Sbjct: 67 LSRKHGGPKDEERHVGDLRNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVVHEKADDL 126
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 127 GKGGNEESTKTGNAGSRLA 145
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L G V+G + F Q + GPV + G+I GLT G HGFH+HE GD + GC S GPH
Sbjct: 4 AVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPH 63
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 64 FNP---LSRK 70
>pdb|3H2P|A Chain A, Human Sod1 D124v Variant
pdb|3H2P|B Chain B, Human Sod1 D124v Variant
Length = 153
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 57/79 (72%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADK+G + I D V+SL G I+GR +VVHEKA DL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKAVDL 126
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 127 GKGGNEESTKTGNAGSRLA 145
Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L G V+G + F Q + GPV + G+I GLT G HGFH+HE GD + GC S GPH
Sbjct: 4 AVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPH 63
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 64 FNP---LSRK 70
>pdb|1E9O|A Chain A, Crystal Structure Of Bovine Sod - 1 Of 3
Length = 152
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 57/79 (72%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TAD NG + I D ++SL G +I+GR +VVHEK DDL
Sbjct: 66 LSKKHGGPKDEERHVGDLGNVTADSNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDL 125
Query: 72 GRGDNAESVKTGNAGARLA 90
GRG N ES KTGNAG+RLA
Sbjct: 126 GRGGNEESTKTGNAGSRLA 144
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 49/66 (74%), Gaps = 5/66 (7%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQG-PVLISGNITGLTPGDHGFHIHEKGDISQGCASMGP 179
AV +L+G V+GT+ F + +G V+++G+ITGLT GDHGFH+H+ GD +QGC S GP
Sbjct: 5 AVCVLSGDGPVQGTIHF---EAKGDTVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGP 61
Query: 180 HYNPFN 185
H+NP +
Sbjct: 62 HFNPLS 67
>pdb|1E9P|B Chain B, Crystal Structure Of Bovine Cu, Zn Sod To 1.7 Angstrom (3
Of 3)
Length = 151
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 58/79 (73%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P+D +RH GDLG++TADKNG + I D ++SL G +I+GR +VVHEK DDL
Sbjct: 65 LSKKHGGPSDDERHVGDLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDL 124
Query: 72 GRGDNAESVKTGNAGARLA 90
GRG N ES TGNAG+RLA
Sbjct: 125 GRGGNEESTSTGNAGSRLA 143
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 3/65 (4%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L+G V+GT+ F V+++G+ITGLT GDHGFH+H+ GD +QGC S GPH
Sbjct: 4 AVCVLSGDGPVQGTIHFEASGDT--VVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPH 61
Query: 181 YNPFN 185
+NP +
Sbjct: 62 FNPLS 66
>pdb|1E9Q|A Chain A, Crystal Structure Of Bovine Cu Zn Sod-(1 Of 3)
Length = 151
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 57/79 (72%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TAD NG + I D ++SL G +I+GR +VVHEK DDL
Sbjct: 65 LSKKHGGPKDEERHVGDLGNVTADSNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDL 124
Query: 72 GRGDNAESVKTGNAGARLA 90
GRG N ES KTGNAG+RLA
Sbjct: 125 GRGGNEESTKTGNAGSRLA 143
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 3/65 (4%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L+G V+GT+ F V+++G+ITGLT GDHGFH+H+ GD +QGC S GPH
Sbjct: 4 AVCVLSGDGPVQGTIHFEAKGDT--VVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPH 61
Query: 181 YNPFN 185
+NP +
Sbjct: 62 FNPLS 66
>pdb|1E9O|B Chain B, Crystal Structure Of Bovine Sod - 1 Of 3
Length = 152
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 57/79 (72%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADKNG + I D ++SL G +I+GR +VVHEK DDL
Sbjct: 66 LSKKHGGPKDDERHVGDLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDL 125
Query: 72 GRGDNAESVKTGNAGARLA 90
GRG N ES TGNAG+RLA
Sbjct: 126 GRGGNEESTSTGNAGSRLA 144
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L G V+GT+ F V+++G+ITGLT GDHGFH+H+ GD +QGC S GPH
Sbjct: 5 AVCVLKGDGPVQGTIHFEAKGDT--VVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPH 62
Query: 181 YNPFN 185
+NP +
Sbjct: 63 FNPLS 67
>pdb|1E9Q|B Chain B, Crystal Structure Of Bovine Cu Zn Sod-(1 Of 3)
Length = 151
Score = 94.4 bits (233), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 57/79 (72%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +RH GDLG++TADKNG + I D ++SL G +I+GR +VVHEK DDL
Sbjct: 65 LSKKHGGPKDDERHVGDLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDL 124
Query: 72 GRGDNAESVKTGNAGARLA 90
GRG N ES TGNAG+RLA
Sbjct: 125 GRGGNEESTSTGNAGSRLA 143
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AV +L G V+GT+ F V+++G+ITGLT GDHGFH+H+ GD +QGC S GPH
Sbjct: 4 AVCVLKGDGPVQGTIHFEAKGDT--VVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPH 61
Query: 181 YNPFN 185
+NP +
Sbjct: 62 FNPLS 66
>pdb|2R27|A Chain A, Constitutively Zinc-Deficient Mutant Of Human Superoxide
Dismutase (Sod), C6a, H80s, H83s, C111s
pdb|2R27|B Chain B, Constitutively Zinc-Deficient Mutant Of Human Superoxide
Dismutase (Sod), C6a, H80s, H83s, C111s
Length = 154
Score = 94.0 bits (232), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 57/79 (72%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L HG P D +R G LG++TADK+G + I D V+SL G +I+GR +VVHEKADDL
Sbjct: 68 LSRKHGGPKDEERSVGSLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDL 127
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 128 GKGGNEESTKTGNAGSRLA 146
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 47/70 (67%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AVA+L G V+G + F Q + GPV + G+I GLT G HGFH+HE GD + GC S GPH
Sbjct: 5 AVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPH 64
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 65 FNP---LSRK 71
>pdb|1XSO|A Chain A, Three-Dimensional Structure Of Xenopus Laevis Cu,Zn
Superoxide Dismutase B Determined By X-Ray
Crystallography At 1.5 Angstroms Resolution
pdb|1XSO|B Chain B, Three-Dimensional Structure Of Xenopus Laevis Cu,Zn
Superoxide Dismutase B Determined By X-Ray
Crystallography At 1.5 Angstroms Resolution
Length = 150
Score = 94.0 bits (232), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/75 (62%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Query: 16 HGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDLGRGD 75
HGAP D DRH GDLG++TA+ G +I+D ++SL GP +I+GR VVHEKADDLG+G
Sbjct: 69 HGAPGDTDRHVGDLGNVTAE-GGVAQFKITDSLISLKGPNSIIGRTAVVHEKADDLGKGG 127
Query: 76 NAESVKTGNAGARLA 90
N ES+KTGNAG RLA
Sbjct: 128 NDESLKTGNAGGRLA 142
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 120 IMAVAILNGK-DVKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMG 178
+ AV +L G DVKG V F Q + +G V + G I GLT G HGFHIH GD + GC S G
Sbjct: 1 VKAVCVLAGSGDVKGVVHFEQ-QDEGAVSVEGKIEGLTDGLHGFHIHVFGDNTNGCMSAG 59
Query: 179 PHYNPFN 185
H+NP N
Sbjct: 60 SHFNPEN 66
>pdb|3HFF|A Chain A, Monomeric Human Cu,Zn Superoxide Dismutase Without Zn
Ligands
Length = 153
Score = 90.5 bits (223), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 55/79 (69%)
Query: 12 LIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDL 71
L G P D +R G LG++TADK+G + I D V+SL G I+GR +VVHEKADDL
Sbjct: 67 LSRKSGGPKDEERSVGSLGNVTADKDGVADVSIEDSVISLSGDHAIIGRTLVVHEKADDL 126
Query: 72 GRGDNAESVKTGNAGARLA 90
G+G N ES KTGNAG+RLA
Sbjct: 127 GKGGNEESTKTGNAGSRLA 145
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AVA+L G V+G + F Q + GPV + G+I GLT G HGFH+HE+ D + GC S GP
Sbjct: 4 AVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSAGPS 63
Query: 181 YNPFNIMSRK 190
+NP +SRK
Sbjct: 64 FNP---LSRK 70
>pdb|1F1A|A Chain A, Crystal Structure Of Yeast H48q Cuznsod Fals Mutant Analog
Length = 154
Score = 84.0 bits (206), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 51/75 (68%)
Query: 16 HGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDLGRGD 75
HGAPTD RH GD+G++ D+NG D ++ L GP +++GR VV+H DDLG+GD
Sbjct: 72 HGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAGQDDLGKGD 131
Query: 76 NAESVKTGNAGARLA 90
ES+KTGNAG R A
Sbjct: 132 TEESLKTGNAGPRPA 146
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 120 IMAVAILNG-KDVKGTVLFLQPKPQGPVLISGNITGLTP-GDHGFHIHEKGDISQGCASM 177
+ AVA+L G V G V F Q P +S I G +P + GFHI E GD + GC S
Sbjct: 2 VQAVAVLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIQEFGDATNGCVSA 61
Query: 178 GPHYNPF 184
GPH+NPF
Sbjct: 62 GPHFNPF 68
>pdb|1F1D|A Chain A, Crystal Structure Of Yeast H46c Cuznsod Mutant
Length = 154
Score = 83.6 bits (205), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 51/75 (68%)
Query: 16 HGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDLGRGD 75
HGAPTD RH GD+G++ D+NG D ++ L GP +++GR VV+H DDLG+GD
Sbjct: 72 HGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAGQDDLGKGD 131
Query: 76 NAESVKTGNAGARLA 90
ES+KTGNAG R A
Sbjct: 132 TEESLKTGNAGPRPA 146
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 120 IMAVAILNG-KDVKGTVLFLQPKPQGPVLISGNITGLTP-GDHGFHIHEKGDISQGCASM 177
+ AVA+L G V G V F Q P +S I G +P + GF IHE GD + GC S
Sbjct: 2 VQAVAVLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFCIHEFGDATNGCVSA 61
Query: 178 GPHYNPF 184
GPH+NPF
Sbjct: 62 GPHFNPF 68
>pdb|1B4T|A Chain A, H48c Yeast Cu(Ii)ZN SUPEROXIDE DISMUTASE ROOM TEMPERATURE
(298k) Structure
Length = 153
Score = 83.6 bits (205), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 51/75 (68%)
Query: 16 HGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDLGRGD 75
HGAPTD RH GD+G++ D+NG D ++ L GP +++GR VV+H DDLG+GD
Sbjct: 71 HGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAGQDDLGKGD 130
Query: 76 NAESVKTGNAGARLA 90
ES+KTGNAG R A
Sbjct: 131 TEESLKTGNAGPRPA 145
Score = 59.7 bits (143), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 120 IMAVAILNG-KDVKGTVLFLQPKPQGPVLISGNITGLTP-GDHGFHIHEKGDISQGCASM 177
+ AVA+L G V G V F Q P +S I G +P + GFHI E GD + GC S
Sbjct: 1 VQAVAVLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHICEFGDATNGCVSA 60
Query: 178 GPHYNPF 184
GPH+NPF
Sbjct: 61 GPHFNPF 67
>pdb|1JK9|A Chain A, Heterodimer Between H48f-Ysod1 And Yccs
pdb|1JK9|C Chain C, Heterodimer Between H48f-Ysod1 And Yccs
Length = 153
Score = 83.6 bits (205), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 51/75 (68%)
Query: 16 HGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDLGRGD 75
HGAPTD RH GD+G++ D+NG D ++ L GP +++GR VV+H DDLG+GD
Sbjct: 71 HGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAGQDDLGKGD 130
Query: 76 NAESVKTGNAGARLA 90
ES+KTGNAG R A
Sbjct: 131 TEESLKTGNAGPRPA 145
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 120 IMAVAILNG-KDVKGTVLFLQPKPQGPVLISGNITGLTP-GDHGFHIHEKGDISQGCASM 177
+ AVA+L G V G V F Q P +S I G +P + GFHI E GD + GC S
Sbjct: 1 VQAVAVLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIFEFGDATNGCVSA 60
Query: 178 GPHYNPF 184
GPH+NPF
Sbjct: 61 GPHFNPF 67
>pdb|1F1G|A Chain A, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|B Chain B, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|C Chain C, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|D Chain D, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|E Chain E, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|F Chain F, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
Length = 154
Score = 83.6 bits (205), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 51/75 (68%)
Query: 16 HGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDLGRGD 75
HGAPTD RH GD+G++ D+NG D ++ L GP +++GR VV+H DDLG+GD
Sbjct: 72 HGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAGQDDLGKGD 131
Query: 76 NAESVKTGNAGARLA 90
ES+KTGNAG R A
Sbjct: 132 TEESLKTGNAGPRPA 146
Score = 63.2 bits (152), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 120 IMAVAILNG-KDVKGTVLFLQPKPQGPVLISGNITGLTP-GDHGFHIHEKGDISQGCASM 177
+ AVA+L G V G V F Q P +S I G +P + GFHIHE GD + GC S
Sbjct: 2 VQAVAVLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIHEFGDATNGCVSA 61
Query: 178 GPHYNPF 184
GPH+NPF
Sbjct: 62 GPHFNPF 68
>pdb|1SDY|A Chain A, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1SDY|B Chain B, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1SDY|C Chain C, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1SDY|D Chain D, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1B4L|A Chain A, 15 Atmosphere Oxygen Yeast CuZN SUPEROXIDE DISMUTASE ROOM
Temperature (298k) Structure
pdb|1YAZ|A Chain A, Azide-Bound Yeast Cu(Ii)ZN SUPEROXIDE DISMUTASE ROOM
Temperature (298k) Structure
pdb|1JCV|A Chain A, Reduced Bridge-Broken Yeast CuZN SUPEROXIDE DISMUTASE LOW
TEMPERATURE (-180c) Structure
pdb|1YSO|A Chain A, Yeast Cu, Zn Superoxide Dismutase With The Reduced Bridge
Broken
pdb|2JCW|A Chain A, Reduced Bridge-Broken Yeast CuZN SUPEROXIDE DISMUTASE ROOM
Temperature (298k) Structure
Length = 153
Score = 83.6 bits (205), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 51/75 (68%)
Query: 16 HGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDLGRGD 75
HGAPTD RH GD+G++ D+NG D ++ L GP +++GR VV+H DDLG+GD
Sbjct: 71 HGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAGQDDLGKGD 130
Query: 76 NAESVKTGNAGARLA 90
ES+KTGNAG R A
Sbjct: 131 TEESLKTGNAGPRPA 145
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 120 IMAVAILNG-KDVKGTVLFLQPKPQGPVLISGNITGLTP-GDHGFHIHEKGDISQGCASM 177
+ AVA+L G V G V F Q P +S I G +P + GFHIHE GD + GC S
Sbjct: 1 VQAVAVLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIHEFGDATNGCVSA 60
Query: 178 GPHYNPF 184
GPH+NPF
Sbjct: 61 GPHFNPF 67
>pdb|2E46|A Chain A, Crystal Structure Analysis Of The Clock Protein Ea4
Length = 157
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 53/75 (70%)
Query: 16 HGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDLGRGD 75
HG P D +RH GDLG++ D+N + + + D +SL GP I+GR VV+HEKADD G+ D
Sbjct: 76 HGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGKSD 135
Query: 76 NAESVKTGNAGARLA 90
+ +S KTGNAG R+A
Sbjct: 136 HPDSRKTGNAGGRVA 150
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 117 TGPIMAVAILNGKDVKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCAS 176
T P A+A+L+ + ++G + F Q + G V + G ITGL PG++GFH+HEKGD+S GC S
Sbjct: 6 TTPSRAIAVLSTETIRGNITFTQVQ-DGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCLS 64
Query: 177 MGPHYNP 183
G H+NP
Sbjct: 65 TGSHFNP 71
>pdb|2E47|A Chain A, Crystal Structure Analysis Of The Clock Protein Ea4
(Glycosylation Form)
pdb|2E47|B Chain B, Crystal Structure Analysis Of The Clock Protein Ea4
(Glycosylation Form)
Length = 156
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 53/75 (70%)
Query: 16 HGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDLGRGD 75
HG P D +RH GDLG++ D+N + + + D +SL GP I+GR VV+HEKADD G+ D
Sbjct: 75 HGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGKSD 134
Query: 76 NAESVKTGNAGARLA 90
+ +S KTGNAG R+A
Sbjct: 135 HPDSRKTGNAGGRVA 149
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 117 TGPIMAVAILNGKDVKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCAS 176
T P A+A+L+ + ++G + F Q + G V + G ITGL PG++GFH+HEKGD+S GC S
Sbjct: 5 TTPSRAIAVLSTETIRGNITFTQVQ-DGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCLS 63
Query: 177 MGPHYNP 183
G H+NP
Sbjct: 64 TGSHFNP 70
>pdb|1F18|A Chain A, Crystal Structure Of Yeast Copper-Zinc Superoxide
Dismutase Mutant Gly85arg
Length = 154
Score = 80.5 bits (197), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 50/75 (66%)
Query: 16 HGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDLGRGD 75
HGAPTD RH GD+ ++ D+NG D ++ L GP +++GR VV+H DDLG+GD
Sbjct: 72 HGAPTDEVRHVGDMRNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAGQDDLGKGD 131
Query: 76 NAESVKTGNAGARLA 90
ES+KTGNAG R A
Sbjct: 132 TEESLKTGNAGPRPA 146
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 120 IMAVAILNG-KDVKGTVLFLQPKPQGPVLISGNITGLTP-GDHGFHIHEKGDISQGCASM 177
+ AVA+L G V G V F Q P +S I G +P + GFHIHE GD + GC S
Sbjct: 2 VQAVAVLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIHEFGDATNGCVSA 61
Query: 178 GPHYNPF 184
GPH+NPF
Sbjct: 62 GPHFNPF 68
>pdb|3CE1|A Chain A, Crystal Structure Of The CuZN SUPEROXIDE DISMUTASE FROM
Cryptococcus Liquefaciens Strain N6
Length = 168
Score = 80.1 bits (196), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 52/75 (69%)
Query: 16 HGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDLGRGD 75
HG T RH GDLG++ D +G +QISD LSL GP +I+GR +V+H DDLG+ D
Sbjct: 75 HGDRTAEVRHVGDLGNVKTDASGVAKVQISDSQLSLVGPHSIIGRTIVIHAGEDDLGKTD 134
Query: 76 NAESVKTGNAGARLA 90
+ ES+KTGNAGAR A
Sbjct: 135 HPESLKTGNAGARSA 149
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 116 VTGPIMAVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTP-GDHGFHIHEKGDISQG 173
++ I A+A+L G V+G + F Q GPV +SG I + GFH+H+ GD S G
Sbjct: 1 MSSTIKAIAVLKGDSPVQGVITFTQESSGGPVTVSGEIKNMDANAQRGFHVHQFGDNSNG 60
Query: 174 CASMGPHYNP 183
C S GPH+NP
Sbjct: 61 CTSAGPHFNP 70
>pdb|3F7K|A Chain A, X-Ray Crystal Structure Of An Alvinella Pompejana Cu,Zn
Superoxide Dismutase- Hydrogen Peroxide Complex
pdb|3F7L|A Chain A, X-Ray Crystal Structure Of Alvinella Pompejana Cu,Zn
Superoxide Dismutase
Length = 152
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 53/75 (70%)
Query: 16 HGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDLGRGD 75
HGAP D +RHAGDLG++ A ++G + + D ++ L GP +++GR +VVH DDLGRG
Sbjct: 69 HGAPEDENRHAGDLGNVVAGEDGKAVINMKDKLVKLTGPDSVIGRTLVVHVDEDDLGRGG 128
Query: 76 NAESVKTGNAGARLA 90
+ +S TGNAG RLA
Sbjct: 129 HEQSKITGNAGGRLA 143
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 42/66 (63%), Gaps = 5/66 (7%)
Query: 120 IMAVAILNGKD-VKGTVLFLQPKPQGP-VLISGNITGLTPGDHGFHIHEKGDISQGCASM 177
I AV +L G V GT+ K +G V ++G ITGLTPG HGFH+HE GD + GC S
Sbjct: 2 IHAVCVLKGDSPVTGTIHL---KEEGDMVTVTGEITGLTPGKHGFHVHEFGDNTNGCTSA 58
Query: 178 GPHYNP 183
G H+NP
Sbjct: 59 GGHFNP 64
>pdb|3KM1|A Chain A, Zinc-Reconstituted Tomato Chloroplast Superoxide Dismutase
pdb|3KM1|B Chain B, Zinc-Reconstituted Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|A Chain A, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|B Chain B, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|C Chain C, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|D Chain D, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|E Chain E, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|F Chain F, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|G Chain G, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|H Chain H, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|I Chain I, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|J Chain J, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|K Chain K, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|L Chain L, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|M Chain M, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|N Chain N, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|O Chain O, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|P Chain P, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|Q Chain Q, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|R Chain R, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|S Chain S, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|T Chain T, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|U Chain U, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|V Chain V, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|W Chain W, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|X Chain X, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3MKG|A Chain A, Low Ph As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3MKG|B Chain B, Low Ph As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3PU7|A Chain A, Cu-Zn Tomato Chloroplast Superoxide Dismutase
pdb|3PU7|B Chain B, Cu-Zn Tomato Chloroplast Superoxide Dismutase
pdb|3HOG|A Chain A, Metal-Free Tomato Chloroplast Superoxide Dismutase
pdb|3S0P|A Chain A, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|B Chain B, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|C Chain C, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|D Chain D, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|E Chain E, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|F Chain F, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|G Chain G, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|H Chain H, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
Length = 154
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 53/75 (70%)
Query: 16 HGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDLGRGD 75
HGAP D RHAGDLG+I A+ +G + + D+ + L GP +++GR +VVHE DDLG+G
Sbjct: 71 HGAPGDEIRHAGDLGNIVANADGVAEVTLVDNQIPLTGPNSVVGRALVVHELEDDLGKGG 130
Query: 76 NAESVKTGNAGARLA 90
+ S+ TGNAG RLA
Sbjct: 131 HELSLTTGNAGGRLA 145
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 37/62 (59%)
Query: 122 AVAILNGKDVKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPHY 181
AVA+L G V+ L GP ++ ITGL PG HGFH+HE GD + GC S G H+
Sbjct: 5 AVAVLKGNSNVEGVVTLSQDDDGPTTVNVRITGLAPGLHGFHLHEYGDTTNGCMSTGAHF 64
Query: 182 NP 183
NP
Sbjct: 65 NP 66
>pdb|1SRD|A Chain A, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
pdb|1SRD|B Chain B, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
pdb|1SRD|C Chain C, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
pdb|1SRD|D Chain D, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
Length = 154
Score = 77.0 bits (188), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 51/75 (68%)
Query: 16 HGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDLGRGD 75
HGAP D RHAGDLG+I A+ +G I D+ + L GP +++GR +VVHE DDLG+G
Sbjct: 71 HGAPEDEVRHAGDLGNIVANTDGVAEATIVDNQIPLTGPNSVVGRALVVHELEDDLGKGG 130
Query: 76 NAESVKTGNAGARLA 90
+ S TGNAG RLA
Sbjct: 131 HELSPTTGNAGGRLA 145
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 122 AVAILNG-KDVKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AVA+L G +V+G V Q + GP ++ I+GL PG HGFH+HE GD + GC S GPH
Sbjct: 5 AVAVLKGTSNVEGVVTLTQ-EDDGPTTVNVRISGLAPGKHGFHLHEFGDTTNGCMSTGPH 63
Query: 181 YNP 183
+NP
Sbjct: 64 FNP 66
>pdb|3L9Y|A Chain A, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
The Silkworm Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9Y|B Chain B, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
The Silkworm Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
Length = 154
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 119 PIMAVAILNGKDVKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMG 178
P AV +L G DV GTV F Q + PV++SG + GLT G HGFH+HE GD + GC S G
Sbjct: 2 PAKAVCVLRG-DVSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGFHVHEFGDNTNGCTSAG 60
Query: 179 PHYNP 183
H+NP
Sbjct: 61 AHFNP 65
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 16 HGAPTDPDRHAGDLGSITA-DKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDLGRG 74
HG P+ RH GDLG+I A + G + I D +SL GP +I+GR +VVH DDLG G
Sbjct: 70 HGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLG 129
Query: 75 DNAESVKTGNAGARLA 90
N S TGNAG R+A
Sbjct: 130 GNELSKTTGNAGGRIA 145
>pdb|3L9E|A Chain A, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9E|B Chain B, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9E|C Chain C, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9E|D Chain D, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
Length = 154
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 119 PIMAVAILNGKDVKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMG 178
P AV +L G DV GTV F Q + PV++SG + GLT G HGFH+HE GD + GC S G
Sbjct: 2 PAKAVCVLRG-DVSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGFHVHEFGDNTNGCTSAG 60
Query: 179 PHYNP 183
H+NP
Sbjct: 61 AHFNP 65
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 16 HGAPTDPDRHAGDLGSITA-DKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDLGRG 74
HG P+ RH GDLG+I A + +G + I D +SL GP +I+GR +VVH DDLG G
Sbjct: 70 HGGPSSAVRHVGDLGNIEAIEDSGVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLG 129
Query: 75 DNAESVKTGNAGARLA 90
+ S TGNAG R+A
Sbjct: 130 GHELSKTTGNAGGRIA 145
>pdb|3KBE|A Chain A, Metal-Free C. Elegans Cu,Zn Superoxide Dismutase
pdb|3KBF|A Chain A, C. Elegans Cu,Zn Superoxide Dismutase
Length = 157
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 41/63 (65%)
Query: 122 AVAILNGKDVKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPHY 181
AVA+L G+ V GT+ Q +I G I GLTPG HGFH+H+ GD + GC S GPH+
Sbjct: 4 AVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGPHF 63
Query: 182 NPF 184
NPF
Sbjct: 64 NPF 66
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 16 HGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDLGR-- 73
HG P RH GDLG++ A +G ++++D +++L GP T++GR +VVH DDLG
Sbjct: 70 HGGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAGQDDLGEGV 129
Query: 74 GDNA-ESVKTGNAGARLA 90
GD A ES KTGNAGAR A
Sbjct: 130 GDKAEESKKTGNAGARAA 147
>pdb|2Q2L|A Chain A, Crystal Structure Of Superoxide Dismutase From P.
Atrosanguina
pdb|2Q2L|B Chain B, Crystal Structure Of Superoxide Dismutase From P.
Atrosanguina
Length = 152
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 49/78 (62%)
Query: 16 HGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDLGRGD 75
HG+P D RHAGDLG+IT +G I D + L GP +I+GR VVVH DDLG+G
Sbjct: 70 HGSPEDETRHAGDLGNITVGDDGTACFTIVDKQIPLTGPHSIIGRAVVVHADPDDLGKGG 129
Query: 76 NAESVKTGNAGARLAQFI 93
+ S TGNAG R+A I
Sbjct: 130 HELSKSTGNAGGRIACGI 147
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 123 VAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPHY 181
VA+L+ + V GT+LF Q + GP ++GNI+GL PG HGFH+H GD + GC S GPH+
Sbjct: 5 VAVLSSSEGVAGTILFTQ-EGDGPTTVTGNISGLKPGLHGFHVHALGDTTNGCMSTGPHF 63
Query: 182 NP 183
NP
Sbjct: 64 NP 65
>pdb|1TO4|A Chain A, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO4|B Chain B, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO4|C Chain C, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO4|D Chain D, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|A Chain A, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|B Chain B, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|C Chain C, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|D Chain D, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
Length = 156
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 50/76 (65%)
Query: 15 PHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDLGRG 74
HGAP D RH GDLG++ A +G +D ++SL+G +I+GR +V+HE DDLGRG
Sbjct: 72 EHGAPEDSIRHVGDLGNVVAGADGNAVYNATDKLISLNGSHSIIGRSMVIHENEDDLGRG 131
Query: 75 DNAESVKTGNAGARLA 90
+ S TGNAG RLA
Sbjct: 132 GHELSKVTGNAGGRLA 147
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 120 IMAVAILNG-KDVKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMG 178
+ AV ++ G VKG V F Q GPV + +GL G HGFH+HE GD + GC S G
Sbjct: 4 MKAVCVMTGTAGVKGVVKFTQETDNGPVHVHAEFSGLKAGKHGFHVHEFGDTTNGCTSAG 63
Query: 179 PHYNP 183
H+NP
Sbjct: 64 AHFNP 68
>pdb|3MND|A Chain A, Crystallographic Analysis Of The Cystosolic CuZN
SUPEROXIDE DISMUTASE From Taenia Solium
pdb|3MND|B Chain B, Crystallographic Analysis Of The Cystosolic CuZN
SUPEROXIDE DISMUTASE From Taenia Solium
Length = 152
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 53/78 (67%)
Query: 16 HGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDLGRGD 75
HGAP +RH GDLG++TA +G +L ++D ++SL G +++GR +V+H DDLG G
Sbjct: 68 HGAPDAAERHVGDLGNVTAGADGKATLDLTDKMISLTGEHSVIGRSLVIHVDPDDLGLGG 127
Query: 76 NAESVKTGNAGARLAQFI 93
+ S+ TGNAG R+A I
Sbjct: 128 HELSLITGNAGGRVACGI 145
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 120 IMAVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMG 178
+ AV ++ G++ VKG V F Q V + GL PG HGFH+HE GD +QGC S G
Sbjct: 1 MKAVCVMRGEEGVKGVVHFTQAGD--AVKVHAEFEGLKPGKHGFHVHEFGDTTQGCTSAG 58
Query: 179 PHYNP 183
H+NP
Sbjct: 59 AHFNP 63
>pdb|1DO5|A Chain A, Human Copper Chaperone For Superoxide Dismutase Domain Ii
pdb|1DO5|B Chain B, Human Copper Chaperone For Superoxide Dismutase Domain Ii
pdb|1DO5|C Chain C, Human Copper Chaperone For Superoxide Dismutase Domain Ii
pdb|1DO5|D Chain D, Human Copper Chaperone For Superoxide Dismutase Domain Ii
Length = 154
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 16 HGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDLGRGD 75
HG P D DRH GDLG++ AD +G ++ D L + ++GR +++ E DDLGRG
Sbjct: 72 HGGPQDSDRHRGDLGNVRADADGRAIFRMEDEQLKV---WDVIGRSLIIDEGEDDLGRGG 128
Query: 76 NAESVKTGNAGARLAQ-FIHKNPGL 99
+ S TGN+G RLA I ++ GL
Sbjct: 129 HPLSKITGNSGERLACGIIARSAGL 153
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 122 AVAILNG-KDVKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQGCASMGPH 180
AVAIL G V+G V FLQ P+ LI G I GL PG HG H+H+ GD++ C S G H
Sbjct: 6 AVAILGGPGTVQGVVRFLQLTPE-RCLIEGTIDGLEPGLHGLHVHQYGDLTNNCNSCGNH 64
Query: 181 YNP 183
+NP
Sbjct: 65 FNP 67
>pdb|2JLP|A Chain A, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase.
pdb|2JLP|B Chain B, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase.
pdb|2JLP|C Chain C, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase.
pdb|2JLP|D Chain D, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase
Length = 222
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 24 RHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDLGRGDNAESVKTG 83
+H GD G+ A ++G + + SL GP +I+GR VVVH DDLGRG N SV+ G
Sbjct: 123 QHPGDFGNF-AVRDGSLWRYRAGLAASLAGPHSIVGRAVVVHAGEDDLGRGGNQASVENG 181
Query: 84 NAGARLAQFI 93
NAG RLA +
Sbjct: 182 NAGRRLACCV 191
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 131 VKGTVLFLQPKPQGPV----LISGNITGLTPGDHGFHIHEKGDISQGCASMGPHYNPFNI 186
V G VLF Q P+ + + G T H+H+ GD+SQGC S GPHYNP +
Sbjct: 60 VTGVVLFRQLAPRAKLDAFFALEGFPTEPNSSSRAIHVHQFGDLSQGCESTGPHYNPLAV 119
>pdb|4BD4|A Chain A, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|B Chain B, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|C Chain C, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|D Chain D, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|E Chain E, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|F Chain F, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|G Chain G, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|H Chain H, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|I Chain I, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
Length = 110
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 10/66 (15%)
Query: 3 LTGGLNQVYLIYPHGAPTDPDRHAGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGV 62
LT GL + + HGA GDLG++TADK+G + I D V+SL G +I+GR +
Sbjct: 38 LTEGL---FGFHVHGA-------GGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTL 87
Query: 63 VVHEKA 68
VVHEKA
Sbjct: 88 VVHEKA 93
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKG 168
AVA+L G V+G + F Q + GPV + G+I GLT G GFH+H G
Sbjct: 4 AVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLFGFHVHGAG 51
>pdb|4BCZ|A Chain A, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form.
pdb|4BCZ|B Chain B, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form
Length = 110
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 32/42 (76%)
Query: 27 GDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKA 68
GDLG++TADK+G + I D V+SL G +I+GR +VVHEKA
Sbjct: 52 GDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKA 93
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 122 AVAILNGKD-VKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKG 168
AVA+L G V+G + F Q + GPV + G+I GLT G HGFH+H G
Sbjct: 4 AVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHGAG 51
>pdb|2WWN|A Chain A, Yersinia Pseudotuberculosis Superoxide Dismutase C With
Bound Azide
pdb|2WWN|B Chain B, Yersinia Pseudotuberculosis Superoxide Dismutase C With
Bound Azide
pdb|2WWO|A Chain A, Yersinia Pseudotuberculosis Superoxide Dismutase C
pdb|2WWO|B Chain B, Yersinia Pseudotuberculosis Superoxide Dismutase C
Length = 169
Score = 33.9 bits (76), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 146 VLISGNITGLTPGDHGFHIHEKGDISQG 173
+L + ++TGL PG HGFH+HEK + G
Sbjct: 45 LLFTPHLTGLAPGIHGFHLHEKPSCAPG 72
>pdb|1OAL|A Chain A, Active Site Copper And Zinc Ions Modulate The Quaternary
Structure Of Prokaryotic Cu,Zn Superoxide Dismutase
Length = 151
Score = 33.1 bits (74), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 29/64 (45%), Gaps = 25/64 (39%)
Query: 141 KPQGPVLISGNITG---------LTPGDHGFHIHEKGDISQGCAS------------MGP 179
KP G + +S N G LTPG+HGFHIH+ G CAS G
Sbjct: 14 KPVGTIELSQNKYGVVFIPELADLTPGEHGFHIHQNGS----CASSEKDGKVVLGGAAGG 69
Query: 180 HYNP 183
HY+P
Sbjct: 70 HYDP 73
>pdb|2AQM|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM BRUCELLA ABORTUS
Length = 154
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 11/66 (16%)
Query: 128 GKDVKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKGDISQG--------CASMGP 179
GK+V V+ P G + N+ LTPG HGFH+HE + G + G
Sbjct: 16 GKEVGTVVISEAP---GGLHFKVNMEKLTPGYHGFHVHENPSCAPGEKDGKIVPALAAGG 72
Query: 180 HYNPFN 185
HY+P N
Sbjct: 73 HYDPGN 78
>pdb|1ESO|A Chain A, Monomeric Cu,Zn Superoxide Dismutase From Escherichia Coli
Length = 154
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 8/46 (17%)
Query: 148 ISGNITGLTPGDHGFHIHEKGDI--------SQGCASMGPHYNPFN 185
S ++ L PG+HGFHIH KG + S G H +P N
Sbjct: 33 FSPDLKALPPGEHGFHIHAKGSCQPATKDGKASAAESAGGHLDPQN 78
>pdb|1IBB|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant W83f
Length = 151
Score = 31.2 bits (69), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 28/64 (43%), Gaps = 25/64 (39%)
Query: 141 KPQGPVLISGNITG---------LTPGDHGFHIHEKGDISQGCAS------------MGP 179
KP G + +S N G LTPG HGFHIH+ G CAS G
Sbjct: 14 KPVGTIELSQNKYGVVFIPELADLTPGMHGFHIHQNGS----CASSEKDGKVVLGGAAGG 69
Query: 180 HYNP 183
HY+P
Sbjct: 70 HYDP 73
>pdb|1IB5|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant W83y
Length = 151
Score = 31.2 bits (69), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 28/64 (43%), Gaps = 25/64 (39%)
Query: 141 KPQGPVLISGNITG---------LTPGDHGFHIHEKGDISQGCAS------------MGP 179
KP G + +S N G LTPG HGFHIH+ G CAS G
Sbjct: 14 KPVGTIELSQNKYGVVFIPELADLTPGMHGFHIHQNGS----CASSEKDGKVVLGGAAGG 69
Query: 180 HYNP 183
HY+P
Sbjct: 70 HYDP 73
>pdb|1IBD|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant V29a
Length = 151
Score = 31.2 bits (69), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 28/64 (43%), Gaps = 25/64 (39%)
Query: 141 KPQGPVLISGNITG---------LTPGDHGFHIHEKGDISQGCAS------------MGP 179
KP G + +S N G LTPG HGFHIH+ G CAS G
Sbjct: 14 KPVGTIELSQNKYGVAFIPELADLTPGMHGFHIHQNGS----CASSEKDGKVVLGGAAGG 69
Query: 180 HYNP 183
HY+P
Sbjct: 70 HYDP 73
>pdb|1YAI|A Chain A, X-Ray Structure Of A Bacterial Copper,Zinc Superoxide
Dismutase
pdb|1YAI|B Chain B, X-Ray Structure Of A Bacterial Copper,Zinc Superoxide
Dismutase
pdb|1YAI|C Chain C, X-Ray Structure Of A Bacterial Copper,Zinc Superoxide
Dismutase
Length = 151
Score = 31.2 bits (69), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 28/64 (43%), Gaps = 25/64 (39%)
Query: 141 KPQGPVLISGNITG---------LTPGDHGFHIHEKGDISQGCAS------------MGP 179
KP G + +S N G LTPG HGFHIH+ G CAS G
Sbjct: 14 KPVGTIELSQNKYGVVFTPELADLTPGMHGFHIHQNGS----CASSEKDGKVVLGGAAGG 69
Query: 180 HYNP 183
HY+P
Sbjct: 70 HYDP 73
>pdb|1BZO|A Chain A, Three-Dimensional Structure Of Prokaryotic Cu,Zn
Superoxide Dismutase From P.Leiognathi, Solved By X-Ray
Crystallography
Length = 151
Score = 31.2 bits (69), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 28/64 (43%), Gaps = 25/64 (39%)
Query: 141 KPQGPVLISGNITG---------LTPGDHGFHIHEKGDISQGCAS------------MGP 179
KP G + +S N G LTPG HGFHIH+ G CAS G
Sbjct: 14 KPVGTIELSQNKYGVVFIPELADLTPGMHGFHIHQNGS----CASSEKDGKVVLGGAAGG 69
Query: 180 HYNP 183
HY+P
Sbjct: 70 HYDP 73
>pdb|1IBF|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant V29g
Length = 151
Score = 31.2 bits (69), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 28/64 (43%), Gaps = 25/64 (39%)
Query: 141 KPQGPVLISGNITG---------LTPGDHGFHIHEKGDISQGCAS------------MGP 179
KP G + +S N G LTPG HGFHIH+ G CAS G
Sbjct: 14 KPVGTIELSQNKYGVGFIPELADLTPGMHGFHIHQNGS----CASSEKDGKVVLGGAAGG 69
Query: 180 HYNP 183
HY+P
Sbjct: 70 HYDP 73
>pdb|1IBH|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant M41i
Length = 151
Score = 31.2 bits (69), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 28/64 (43%), Gaps = 25/64 (39%)
Query: 141 KPQGPVLISGNITG---------LTPGDHGFHIHEKGDISQGCAS------------MGP 179
KP G + +S N G LTPG HGFHIH+ G CAS G
Sbjct: 14 KPVGTIELSQNKYGVVFIPELADLTPGIHGFHIHQNGS----CASSEKDGKVVLGGAAGG 69
Query: 180 HYNP 183
HY+P
Sbjct: 70 HYDP 73
>pdb|1OAJ|A Chain A, Active Site Copper And Zinc Ions Modulate The Quaternary
Structure Of Prokaryotic Cu,Zn Superoxide Dismutase
Length = 151
Score = 30.8 bits (68), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 28/64 (43%), Gaps = 25/64 (39%)
Query: 141 KPQGPVLISGNITG---------LTPGDHGFHIHEKGDISQGCAS------------MGP 179
KP G + +S N G LTPG HGFHIH+ G CAS G
Sbjct: 14 KPVGTIELSQNDYGVVFIPELADLTPGMHGFHIHQNGS----CASSEKDGKVVLGGAAGG 69
Query: 180 HYNP 183
HY+P
Sbjct: 70 HYDP 73
>pdb|1EJ8|A Chain A, Crystal Structure Of Domain 2 Of The Yeast Copper
Chaperone For Superoxide Dismutase (Lys7) At 1.55 A
Resolution
Length = 140
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 158 GDHGFHIHEKGDISQGCASMGPHYNPFN 185
G++ IHEKGD+S+G S G ++ F+
Sbjct: 50 GNYHASIHEKGDVSKGVESTGKVWHKFD 77
>pdb|1JK9|B Chain B, Heterodimer Between H48f-Ysod1 And Yccs
pdb|1JK9|D Chain D, Heterodimer Between H48f-Ysod1 And Yccs
Length = 249
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 158 GDHGFHIHEKGDISQGCASMGPHYNPFN 185
G++ IHEKGD+S+G S G ++ F+
Sbjct: 127 GNYHASIHEKGDVSKGVESTGKVWHKFD 154
>pdb|1XTM|B Chain B, Crystal Structure Of The Double Mutant Y88h-p104h Of A
Sod-like Protein From Bacillus Subtilis.
pdb|1XTM|A Chain A, Crystal Structure Of The Double Mutant Y88h-p104h Of A
Sod-like Protein From Bacillus Subtilis
Length = 175
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Query: 146 VLISGNITGLTPGDH-GFHIHEKGD-ISQGCASMGPHYNPFN 185
+ IS N L PG GFHIHEKG + S G H+NP N
Sbjct: 49 IHISAN--SLRPGASLGFHIHEKGSCVRPDFESAGGHFNPLN 88
Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 11/70 (15%)
Query: 25 HAGDLGSITADKNGFVS--LQISDHVLSLDGPLTIL---GRGVVVHEKADDLGRGDNAES 79
HAGDL ++ +G V + D L L IL G ++HE+ADD +
Sbjct: 100 HAGDLPNLEVGADGKVDVIMNAPDTSLKKGSKLNILDEDGSAFIIHEQADDY------LT 153
Query: 80 VKTGNAGARL 89
+GN+GAR+
Sbjct: 154 NPSGNSGARI 163
>pdb|1QUP|A Chain A, Crystal Structure Of The Copper Chaperone For Superoxide
Dismutase
pdb|1QUP|B Chain B, Crystal Structure Of The Copper Chaperone For Superoxide
Dismutase
Length = 222
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 158 GDHGFHIHEKGDISQGCASMGPHYNPFN 185
G++ IHEKGD+S+G S G ++ F+
Sbjct: 126 GNYHASIHEKGDVSKGVESTGKVWHKFD 153
>pdb|1EQW|A Chain A, Crystal Structure Of Salmonella Typhimurium Cu,Zn
Superoxide Dismutase
pdb|1EQW|B Chain B, Crystal Structure Of Salmonella Typhimurium Cu,Zn
Superoxide Dismutase
pdb|1EQW|C Chain C, Crystal Structure Of Salmonella Typhimurium Cu,Zn
Superoxide Dismutase
pdb|1EQW|D Chain D, Crystal Structure Of Salmonella Typhimurium Cu,Zn
Superoxide Dismutase
Length = 156
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 146 VLISGNITGLTPGDHGFHIH 165
+L + ++ GLTPG HGFH+H
Sbjct: 31 LLFTPHLNGLTPGIHGFHVH 50
>pdb|1S4I|B Chain B, Crystal Structure Of A Sod-like Protein From Bacillus
Subtilis
pdb|1S4I|A Chain A, Crystal Structure Of A Sod-like Protein From Bacillus
Subtilis
pdb|1S4I|C Chain C, Crystal Structure Of A Sod-like Protein From Bacillus
Subtilis
pdb|1S4I|D Chain D, Crystal Structure Of A Sod-like Protein From Bacillus
Subtilis
Length = 175
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 11/70 (15%)
Query: 25 HAGDLGSITADKNGFVS--LQISDHVLSLDGPLTIL---GRGVVVHEKADDLGRGDNAES 79
HAGDL ++ +G V + D L L IL G ++HE+ADD +
Sbjct: 100 HAGDLPNLEVGADGKVDVIMNAPDTSLKKGSKLNILDEDGSAFIIHEQADDY------LT 153
Query: 80 VKTGNAGARL 89
+GN+GAR+
Sbjct: 154 NPSGNSGARI 163
>pdb|1XTL|B Chain B, Crystal Structure Of P104h Mutant Of Sod-Like Protein From
Bacillus Subtilis.
pdb|1XTL|A Chain A, Crystal Structure Of P104h Mutant Of Sod-Like Protein From
Bacillus Subtilis.
pdb|1XTL|C Chain C, Crystal Structure Of P104h Mutant Of Sod-Like Protein From
Bacillus Subtilis.
pdb|1XTL|D Chain D, Crystal Structure Of P104h Mutant Of Sod-Like Protein From
Bacillus Subtilis
Length = 175
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 11/70 (15%)
Query: 25 HAGDLGSITADKNGFVS--LQISDHVLSLDGPLTIL---GRGVVVHEKADDLGRGDNAES 79
HAGDL ++ +G V + D L L IL G ++HE+ADD +
Sbjct: 100 HAGDLPNLEVGADGKVDVIMNAPDTSLKKGSKLNILDEDGSAFIIHEQADDY------LT 153
Query: 80 VKTGNAGARL 89
+GN+GAR+
Sbjct: 154 NPSGNSGARI 163
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Query: 146 VLISGNITGLTPGDH-GFHIHEKGD-ISQGCASMGPHYNPFN 185
+ IS N L PG GFHI+EKG + S G H+NP N
Sbjct: 49 IHISAN--SLRPGASLGFHIYEKGSCVRPDFESAGGHFNPLN 88
>pdb|1U3N|A Chain A, A Sod-Like Protein From B. Subtilis, Unstructured In
Solution, Becomes Ordered In The Crystal: Implications
For Function And For Fibrillogenesis
Length = 162
Score = 28.1 bits (61), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 11/79 (13%)
Query: 16 HGAPTDPDRHAGDLGSITADKNGFVSLQIS--DHVLSLDGPLTIL---GRGVVVHEKADD 70
HG HAGDL ++ +G V + ++ D L L IL G ++HE+ADD
Sbjct: 78 HGFNNPMGHHAGDLPNLEVGADGKVDVIMNAPDTSLKKGSKLNILDEDGSAFIIHEQADD 137
Query: 71 LGRGDNAESVKTGNAGARL 89
+ +GN+GAR+
Sbjct: 138 Y------LTNPSGNSGARI 150
>pdb|2K4W|A Chain A, The Solution Structure Of The Monomeric Copper, Zinc
Superox Dismutase From Salmonella Enterica
Length = 154
Score = 27.7 bits (60), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 8/51 (15%)
Query: 143 QGPVLISGNITGLTPGDHGFHIHEKGD----ISQGCA----SMGPHYNPFN 185
+G + + ++ L PG+HGFHIH G I G A + G H +P N
Sbjct: 28 EGGLKFTPHLKALPPGEHGFHIHANGSCQPAIKDGQAVAAEAAGGHLDPQN 78
>pdb|2AQS|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91E, K94e Double Mutant
pdb|2AQS|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91E, K94e Double Mutant
Length = 164
Score = 26.9 bits (58), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 12/73 (16%)
Query: 120 IMAVAILNGKDVKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIH---------EKGDI 170
+ + +NG GTV + ++ + ++ GL+ G HGFHIH E+G++
Sbjct: 16 VQQLDPVNGNKDVGTVTITESNYG--LVFTPDLQGLSEGLHGFHIHENPSCEPKEEEGEL 73
Query: 171 SQGCASMGPHYNP 183
+ G + G H++P
Sbjct: 74 TAGLGAGG-HWDP 85
>pdb|1PZS|A Chain A, Crystal Structure Of A Cu-Zn Superoxide Dismutase From
Mycobacterium Tuberculosis At 1.63 Resolution
Length = 208
Score = 26.6 bits (57), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 13/78 (16%)
Query: 26 AGDLGSITADKNGFVSLQISDHVLSLDGPLTILGRGVVVHEKADDLGR------------ 73
+GDL S+ +G L + ++D L+ +++H AD+
Sbjct: 124 SGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTAIIIHAGADNFANIPPERYVQVNGT 183
Query: 74 -GDNAESVKTGNAGARLA 90
G + ++ TG+AG R+A
Sbjct: 184 PGPDETTLTTGDAGKRVA 201
>pdb|3TGO|C Chain C, Crystal Structure Of The E. Coli Bamcd Complex
pdb|3TGO|D Chain D, Crystal Structure Of The E. Coli Bamcd Complex
Length = 323
Score = 26.6 bits (57), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 112 LMLTVTGPIMAVAILNGKDVKGTVLFLQPKPQGPVLISGNITGLTPGDHGFHIHEKG 168
++L VT A+ + NG G L ++P Q L+SG T T GD + E G
Sbjct: 35 MILPVTSGDYAIPVTNGSGAVGKALDIRPPAQPLALVSGARTQFT-GDTASLLVENG 90
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.140 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,765,470
Number of Sequences: 62578
Number of extensions: 296171
Number of successful extensions: 871
Number of sequences better than 100.0: 120
Number of HSP's better than 100.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 652
Number of HSP's gapped (non-prelim): 226
length of query: 193
length of database: 14,973,337
effective HSP length: 93
effective length of query: 100
effective length of database: 9,153,583
effective search space: 915358300
effective search space used: 915358300
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 49 (23.5 bits)