RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy9878
(338 letters)
>gnl|CDD|239134 cd02669, Peptidase_C19M, A subfamily of Peptidase C19. Peptidase
C19 contains ubiquitinyl hydrolases. They are
intracellular peptidases that remove ubiquitin molecules
from polyubiquinated peptides by cleavage of isopeptide
bonds. They hydrolyze bonds involving the carboxyl group
of the C-terminal Gly residue of ubiquitin. The purpose
of the de-ubiquitination is thought to be editing of the
ubiquitin conjugates, which could rescue them from
degradation, as well as recycling of the ubiquitin. The
ubiquitin/proteasome system is responsible for most
protein turnover in the mammalian cell, and with over 50
members, family C19 is one of the largest families of
peptidases in the human genome.
Length = 440
Score = 418 bits (1076), Expect = e-146
Identities = 172/323 (53%), Positives = 209/323 (64%), Gaps = 55/323 (17%)
Query: 12 PYLDTINRQLLDFDFEKLCSVSLSRINVYACLVCGKYFQGRGTNTFAYTHSVAESHHVFL 71
PYLDTINR +LDFDFEK+CSVSLS +NVYACLVCGKYFQGRG + AYTHS+ ++HHVFL
Sbjct: 1 PYLDTINRSVLDFDFEKVCSVSLSNLNVYACLVCGKYFQGRGKGSHAYTHSLEDNHHVFL 60
Query: 72 NLHTLKFYCLPDNYEIVGTVAGPVVNRLCPYLDTINRQLLDFDFEKLCSVSLSRINVYAC 131
NL TLKFYCLPDNYEI+
Sbjct: 61 NLETLKFYCLPDNYEII------------------------------------------- 77
Query: 132 LVCGKYFQDSSLDDIKYVLNPTFTTDQIKQLDLSDKMSRAIDGTLYLPGIVGLNNIKAND 191
DSSLDDIKYVLNPT+T +QI LD K+SR +DG YLPG VGLNNIK ND
Sbjct: 78 --------DSSLDDIKYVLNPTYTKEQISDLDRDPKLSRDLDGKPYLPGFVGLNNIKNND 129
Query: 192 YCNVILQALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHV 251
Y NVI+QAL HV P+R++FL NY +K LV+R EL+RK+WNPRNFK HV
Sbjct: 130 YANVIIQALSHVKPIRNFFLLYENYENIKDRKS----ELVKRLSELIRKIWNPRNFKGHV 185
Query: 252 SPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMK 311
SPHE+LQAV S+K+F TEQSDP++FLSW LNTLH+ L G+KK +SSI++ F G ++
Sbjct: 186 SPHELLQAVSKVSKKKFSITEQSDPVEFLSWLLNTLHKDLGGSKKPNSSIIHDCFQGKVQ 245
Query: 312 VKTRKIPPVELEEKVRQRLLLTD 334
++T+KI P EE + +
Sbjct: 246 IETQKIKPHAEEEGSKDKFFKDS 268
>gnl|CDD|215922 pfam00443, UCH, Ubiquitin carboxyl-terminal hydrolase.
Length = 313
Score = 94.8 bits (236), Expect = 3e-22
Identities = 43/139 (30%), Positives = 64/139 (46%), Gaps = 10/139 (7%)
Query: 179 PGIVGLNNIKANDYCNVILQALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELM 238
G GL N+ Y N +LQAL + PLRDY L+ + + L + +L
Sbjct: 1 EGPTGLANLGNTCYMNSVLQALFSIPPLRDYLLQNSSELINPLGSLNQ---LPRALADLF 57
Query: 239 RKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK- 297
L +P + + VSP LQA+ QF Q D +FL + L+ LH LN KK+
Sbjct: 58 HALQSPNSKNASVSPKNFLQALG-KISPQFSGYMQQDAHEFLLFLLDQLHEDLNSLKKRK 116
Query: 298 -----DSSIVYKTFLGSMK 311
+ S++ K F G ++
Sbjct: 117 SHAAENESLITKLFQGQLE 135
>gnl|CDD|216903 pfam02148, zf-UBP, Zn-finger in ubiquitin-hydrolases and other
protein.
Length = 63
Score = 75.5 bits (186), Expect = 1e-17
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 30 CSVSLSRINVYACLVCGKYFQGRGTNTFAYTHSVAESHHVFLNLHTLKFYCLPDNYEI 87
CS S N++ CL CG GR +N A H H + ++L T + +C + +
Sbjct: 1 CSECGSTENLWLCLTCGHVGCGRYSNGHALKHYEETGHPLAVSLETGRVWCYACDDYV 58
Score = 34.3 bits (79), Expect = 0.008
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 119 CSVSLSRINVYACLVCGKYFQ 139
CS S N++ CL CG
Sbjct: 1 CSECGSTENLWLCLTCGHVGC 21
>gnl|CDD|197632 smart00290, ZnF_UBP, Ubiquitin Carboxyl-terminal Hydrolase-like
zinc finger.
Length = 50
Score = 54.7 bits (132), Expect = 3e-10
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 30 CSVSLSRINVYACLVCGKYFQGRGTNTFAYTHSVAESHHVFLNLHTLKF 78
CSV + N++ CL CG+ GR N A H H + + L T +
Sbjct: 2 CSVCGTIENLWLCLTCGQVGCGRYQNGHALEHFEETGHPLVVKLGTQRV 50
Score = 30.4 bits (69), Expect = 0.13
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 119 CSVSLSRINVYACLVCGKYFQ 139
CSV + N++ CL CG+
Sbjct: 2 CSVCGTIENLWLCLTCGQVGC 22
>gnl|CDD|227847 COG5560, UBP12, Ubiquitin C-terminal hydrolase [Posttranslational
modification, protein turnover, chaperones].
Length = 823
Score = 49.9 bits (119), Expect = 1e-06
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 12/125 (9%)
Query: 178 LPGIVGLNNIKANDYCNVILQALCHVTPLRDYFL-----REINYARVKRPPGDSSFLLVQ 232
G GL N+ Y N LQ L H LRDYFL IN G +
Sbjct: 262 EAGTCGLRNLGNTCYMNSALQCLMHTWELRDYFLSDEYEESINEENPLGMHGS----VAS 317
Query: 233 RFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALN 292
+ +L+++L++ H + + ++F +Q D +F+++ L+ LH LN
Sbjct: 318 AYADLIKQLYDGNL---HAFTPSGFKKTIGSFNEEFSGYDQQDSQEFIAFLLDGLHEDLN 374
Query: 293 GTKKK 297
KK
Sbjct: 375 RIIKK 379
>gnl|CDD|239125 cd02660, Peptidase_C19D, A subfamily of Peptidase C19. Peptidase
C19 contains ubiquitinyl hydrolases. They are
intracellular peptidases that remove ubiquitin molecules
from polyubiquinated peptides by cleavage of isopeptide
bonds. They hydrolyze bonds involving the carboxyl group
of the C-terminal Gly residue of ubiquitin. The purpose
of the de-ubiquitination is thought to be editing of the
ubiquitin conjugates, which could rescue them from
degradation, as well as recycling of the ubiquitin. The
ubiquitin/proteasome system is responsible for most
protein turnover in the mammalian cell, and with over 50
members, family C19 is one of the largest families of
peptidases in the human genome.
Length = 328
Score = 49.3 bits (118), Expect = 1e-06
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 14/137 (10%)
Query: 183 GLNNIKANDYCNVILQALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW 242
GL N+ A + NVILQAL H LR+YFL + + +S M +++
Sbjct: 2 GLINLGATCFMNVILQALLHNPLLRNYFLSDRHSCTCLSCSPNSC------LSCAMDEIF 55
Query: 243 NPRNFKSHVSPHEMLQAVVLW--SRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSS 300
+ SP+ + + L + Q D +F + L+ LH G K + +
Sbjct: 56 QEFYYSGDRSPYGPINLLYLSWKHSRNLAGYSQQDAHEFFQFLLDQLHTHYGGDKNEAND 115
Query: 301 ------IVYKTFLGSMK 311
I+++TF GS++
Sbjct: 116 ESHCNCIIHQTFSGSLQ 132
>gnl|CDD|239126 cd02661, Peptidase_C19E, A subfamily of Peptidase C19. Peptidase
C19 contains ubiquitinyl hydrolases. They are
intracellular peptidases that remove ubiquitin molecules
from polyubiquinated peptides by cleavage of isopeptide
bonds. They hydrolyze bonds involving the carboxyl group
of the C-terminal Gly residue of ubiquitin. The purpose
of the de-ubiquitination is thought to be editing of the
ubiquitin conjugates, which could rescue them from
degradation, as well as recycling of the ubiquitin. The
ubiquitin/proteasome system is responsible for most
protein turnover in the mammalian cell, and with over 50
members, family C19 is one of the largest families of
peptidases in the human genome.
Length = 304
Score = 43.0 bits (102), Expect = 9e-05
Identities = 30/138 (21%), Positives = 59/138 (42%), Gaps = 16/138 (11%)
Query: 183 GLNNIKANDYCNVILQALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW 242
GL N+ + N +LQ L H PL +Y L +++ G ++ + R L
Sbjct: 3 GLQNLGNTCFLNSVLQCLTHTPPLANYLLSR-EHSKDCCNEGFCMMCALEAH--VERALA 59
Query: 243 NPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRA-LNGTKK----- 296
+ + L+ + K F+ Q D +FL + L+ + +A L+ KK
Sbjct: 60 SSGPGSAPRIFSSNLKQI----SKHFRIGRQEDAHEFLRYLLDAMQKACLDRFKKLKAVD 115
Query: 297 ---KDSSIVYKTFLGSMK 311
+++++V + F G ++
Sbjct: 116 PSSQETTLVQQIFGGYLR 133
>gnl|CDD|227820 COG5533, UBP5, Ubiquitin C-terminal hydrolase [Posttranslational
modification, protein turnover, chaperones].
Length = 415
Score = 38.1 bits (88), Expect = 0.006
Identities = 55/195 (28%), Positives = 77/195 (39%), Gaps = 25/195 (12%)
Query: 113 FDFEKLCSVSLSRINVYACLVCGKYFQDSSLDDIKYVLNPTFTTD-QIKQLDLSDKMSRA 171
+DF K S + Y+ +YF+D SL Y + + D +L KM +
Sbjct: 7 YDFLKSAPFHPSMVICYSLE---RYFEDVSLAYKLYSMLRSLKLDPHFMELANPKKMVVS 63
Query: 172 IDGTLYLPGIVGLNNIKANDYCNVILQAL--CH--VTPLRDYF-LREINYARVKRPPGDS 226
P GL N Y N LQ L T L+ F L+ IN + PG +
Sbjct: 64 KRKDNLPP--NGLRNKGNTCYMNCALQCLLSIGDLNTMLQGRFYLQNINTDFPRGKPGSN 121
Query: 227 SF----LLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSW 282
+F L + G K +PRNF ++L K F Q D +FL +
Sbjct: 122 AFKQFIALYETPGCHGPKSISPRNFI------DILSGRN----KLFSGDMQQDSQEFLIF 171
Query: 283 FLNTLHRALNGTKKK 297
FL+ LH LNG K +
Sbjct: 172 FLDLLHEDLNGNKSR 186
>gnl|CDD|239072 cd02257, Peptidase_C19, Peptidase C19 contains ubiquitinyl
hydrolases. They are intracellular peptidases that
remove ubiquitin molecules from polyubiquinated peptides
by cleavage of isopeptide bonds. They hydrolyse bonds
involving the carboxyl group of the C-terminal Gly
residue of ubiquitin The purpose of the
de-ubiquitination is thought to be editing of the
ubiquitin conjugates, which could rescue them from
degradation, as well as recycling of the ubiquitin. The
ubiquitin/proteasome system is responsible for most
protein turnover in the mammalian cell, and with over 50
members, family C19 is one of the largest families of
peptidases in the human genome.
Length = 255
Score = 37.1 bits (86), Expect = 0.009
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 270 FTEQSDPIDFLSWFLNTLHRALNGTKKKDS------SIVYKTFLGSMKVKTR 315
F+EQ D +FL + L+ LH L + K+ S S+++ F G ++
Sbjct: 19 FSEQQDAHEFLLFLLDKLHEELKKSSKRTSDSSSLKSLIHDLFGGKLESTIV 70
Score = 34.4 bits (79), Expect = 0.056
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 183 GLNNIKANDYCNVILQALCH 202
GLNN+ Y N +LQAL
Sbjct: 1 GLNNLGNTCYLNSVLQALFS 20
>gnl|CDD|239122 cd02657, Peptidase_C19A, A subfamily of Peptidase C19. Peptidase
C19 contains ubiquitinyl hydrolases. They are
intracellular peptidases that remove ubiquitin molecules
from polyubiquinated peptides by cleavage of isopeptide
bonds. They hydrolyse bonds involving the carboxyl group
of the C-terminal Gly residue of ubiquitin. The purpose
of the de-ubiquitination is thought to be editing of the
ubiquitin conjugates, which could rescue them from
degradation, as well as recycling of the ubiquitin. The
ubiquitin/proteasome system is responsible for most
protein turnover in the mammalian cell, and with over 50
members, family C19 is one of the largest families of
peptidases in the human genome.
Length = 305
Score = 36.5 bits (85), Expect = 0.015
Identities = 43/152 (28%), Positives = 57/152 (37%), Gaps = 20/152 (13%)
Query: 183 GLNNIKANDYCNVILQALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW 242
GL N+ Y N LQ L V LRD NY +R SS L +L +
Sbjct: 1 GLTNLGNTCYLNSTLQCLRSVPELRDALK---NYNPARRGANQSSDNLTNALRDLFDTM- 56
Query: 243 NPRNFKSHVSPHEMLQAVVLWSRKQF-QFTE--------QSDPIDFLSWFLNTLHRALNG 293
+ V P E LQ + R F QF E Q D + S L+ L + L G
Sbjct: 57 --DKKQEPVPPIEFLQLL----RMAFPQFAEKQNQGGYAQQDAEECWSQLLSVLSQKLPG 110
Query: 294 TKKKDSSIVYKTFLGSMKVKTRKIPPVELEEK 325
K S I + F ++ K + + EE
Sbjct: 111 AGSKGSFID-QLFGIELETKMKCTESPDEEEV 141
>gnl|CDD|239131 cd02666, Peptidase_C19J, A subfamily of Peptidase C19. Peptidase
C19 contains ubiquitinyl hydrolases. They are
intracellular peptidases that remove ubiquitin molecules
from polyubiquinated peptides by cleavage of isopeptide
bonds. They hydrolyze bonds involving the carboxyl group
of the C-terminal Gly residue of ubiquitin. The purpose
of the de-ubiquitination is thought to be editing of the
ubiquitin conjugates, which could rescue them from
degradation, as well as recycling of the ubiquitin. The
ubiquitin/proteasome system is responsible for most
protein turnover in the mammalian cell, and with over 50
members, family C19 is one of the largest families of
peptidases in the human genome.
Length = 343
Score = 35.5 bits (82), Expect = 0.032
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 9/69 (13%)
Query: 182 VGLNNIKANDYCNVILQALCHVTPLRDYFL--------REINYARVKRPPGDS-SFLLVQ 232
GL+NI Y N +LQ + PLRD L +Y +R G S +Q
Sbjct: 2 AGLDNIGNTCYLNSLLQYFFTIKPLRDLVLNFDESKAELASDYPTERRIGGREVSRSELQ 61
Query: 233 RFGELMRKL 241
R + + +L
Sbjct: 62 RSNQFVYEL 70
>gnl|CDD|239124 cd02659, peptidase_C19C, A subfamily of Peptidase C19. Peptidase
C19 contains ubiquitinyl hydrolases. They are
intracellular peptidases that remove ubiquitin molecules
from polyubiquinated peptides by cleavage of isopeptide
bonds. They hydrolyze bonds involving the carboxyl group
of the C-terminal Gly residue of ubiquitin. The purpose
of the de-ubiquitination is thought to be editing of the
ubiquitin conjugates, which could rescue them from
degradation, as well as recycling of the ubiquitin. The
ubiquitin/proteasome system is responsible for most
protein turnover in the mammalian cell, and with over 50
members, family C19 is one of the largest families of
peptidases in the human genome.
Length = 334
Score = 33.8 bits (78), Expect = 0.10
Identities = 30/138 (21%), Positives = 45/138 (32%), Gaps = 22/138 (15%)
Query: 180 GIVGLNNIKANDYCNVILQALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQR-FGELM 238
G VGL N A Y N +LQ L R+ S L +QR F L
Sbjct: 1 GYVGLKNQGATCYMNSLLQQLYMTPEFRNAVYSIP--PTEDDDDNKSVPLALQRLFLFL- 57
Query: 239 RKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFT-----EQSDPIDFLSWFLNTLHRALNG 293
+S + + + F + EQ D +F + L L G
Sbjct: 58 -----------QLSESPVKTTELTDKTRSFGWDSLNTFEQHDVQEFFRVLFDKLEEKLKG 106
Query: 294 TKKKDSSIVYKTFLGSMK 311
T ++ ++ F G +
Sbjct: 107 TGQEG--LIKNLFGGKLV 122
>gnl|CDD|239133 cd02668, Peptidase_C19L, A subfamily of Peptidase C19. Peptidase
C19 contains ubiquitinyl hydrolases. They are
intracellular peptidases that remove ubiquitin molecules
from polyubiquinated peptides by cleavage of isopeptide
bonds. They hydrolyze bonds involving the carboxyl group
of the C-terminal Gly residue of ubiquitin. The purpose
of the de-ubiquitination is thought to be editing of the
ubiquitin conjugates, which could rescue them from
degradation, as well as recycling of the ubiquitin. The
ubiquitin/proteasome system is responsible for most
protein turnover in the mammalian cell, and with over 50
members, family C19 is one of the largest families of
peptidases in the human genome.
Length = 324
Score = 33.2 bits (76), Expect = 0.17
Identities = 30/134 (22%), Positives = 48/134 (35%), Gaps = 14/134 (10%)
Query: 183 GLNNIKANDYCNVILQALCHVTPLRDYFLR----EINYARVKRPPGD-SSFLLVQRFGEL 237
GL N+ A Y N LQ R E + P ++ + +
Sbjct: 1 GLKNLGATCYVNSFLQLWFMNLEFRKAVYECNSTEDAELKNMPPDKPHEPQTIIDQLQLI 60
Query: 238 MRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK 297
+L +S V P ++A+ L + +Q D +F FL+ L L+ +K
Sbjct: 61 FAQLQFGN--RSVVDPSGFVKALGLDTG------QQQDAQEFSKLFLSLLEAKLSKSKNP 112
Query: 298 D-SSIVYKTFLGSM 310
D +IV F G
Sbjct: 113 DLKNIVQDLFRGEY 126
>gnl|CDD|213963 TIGR04350, C_S_lyase_PatB, putative C-S lyase. Members of this
subfamily are probable C-S lyases from a family of
pyridoxal phosphate-dependent enzymes that tend to be
(mis)annotated as probable aminotransferases. One member
is PatB of Bacillus subtilis, a proven C-S-lyase.
Another is the virulence factor cystalysin from
Treponema denticola, whose hemolysin activity may stem
from H2S production. Members of the seed alignment occur
next to examples of the enzyme 5-histidylcysteine
sulfoxide synthase, from ovothiol A biosynthesis, and
would be expected to perform a C-S cleavage of
5-histidylcysteine sulfoxide to leave
1-methyl-4-mercaptohistidine (ovothiol A).
Length = 384
Score = 32.7 bits (75), Expect = 0.27
Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 17/93 (18%)
Query: 253 PHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLH---RALNGTKKKDSSI----VYKT 305
P + AV+ W ++ + + I FL + +L RAL T + I VY
Sbjct: 62 PDSLYAAVINWLAQRHGWQIDPEWIVFLPGVVPSLFAAVRAL--TAPGEGVIVQTPVYPP 119
Query: 306 FLGSMKVKTRKIPPVELEEKVRQRLLLTDNSYR 338
FL ++K R++ V L L YR
Sbjct: 120 FLSAVKSNGREL--------VLNPLKLDPGRYR 144
>gnl|CDD|218288 pfam04842, DUF639, Plant protein of unknown function (DUF639).
Plant protein of unknown function.
Length = 682
Score = 29.5 bits (66), Expect = 2.7
Identities = 15/64 (23%), Positives = 28/64 (43%)
Query: 158 QIKQLDLSDKMSRAIDGTLYLPGIVGLNNIKANDYCNVILQALCHVTPLRDYFLREINYA 217
+ L + ++RAI G L + + N+ + Y N+++ +L P D L +
Sbjct: 329 NVFGLQREEALARAILGIARLQALQEMRNLPDDPYKNLLIFSLLEQVPGGDIVLETLAEF 388
Query: 218 RVKR 221
KR
Sbjct: 389 STKR 392
>gnl|CDD|182105 PRK09840, PRK09840, catecholate siderophore receptor Fiu;
Provisional.
Length = 761
Score = 29.4 bits (66), Expect = 3.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Query: 214 INYARVKRPPGDSSFLLVQ 232
INYA ++PPG S+F L Q
Sbjct: 532 INYAVSQQPPGGSNFALAQ 550
>gnl|CDD|183017 PRK11177, PRK11177, phosphoenolpyruvate-protein phosphotransferase;
Provisional.
Length = 575
Score = 28.8 bits (65), Expect = 4.7
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 12/60 (20%)
Query: 145 DIKYVLNPTFTTDQIKQLDLSDKMSRAIDGTLYLPGIVGLNNI----KANDYCNVILQAL 200
++K VL F TD + + M+R +L LP IVG NI K DY +IL A+
Sbjct: 172 NLKKVLG--FITDIGGRTSHTSIMAR----SLELPAIVGTGNITKQVKNGDY--LILDAV 223
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.325 0.140 0.430
Gapped
Lambda K H
0.267 0.0702 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 17,348,528
Number of extensions: 1654896
Number of successful extensions: 1731
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1724
Number of HSP's successfully gapped: 30
Length of query: 338
Length of database: 10,937,602
Length adjustment: 98
Effective length of query: 240
Effective length of database: 6,590,910
Effective search space: 1581818400
Effective search space used: 1581818400
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (26.6 bits)