RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy988
(408 letters)
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 94.4 bits (233), Expect = 2e-22
Identities = 57/332 (17%), Positives = 111/332 (33%), Gaps = 30/332 (9%)
Query: 6 RLWHISRKECLCCFQHIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAVWNEVEG 65
+ W E H VT + FHP +S S D +++W+ ++G
Sbjct: 1 KEWIPRPPEKYALSGHRSPVTRVIFHP-VFSVMVSASEDATIKVWDYETGDFE--RTLKG 57
Query: 66 QTKLITAANFCENGKFAVVGSYDGRCIFYTTDQLKYHTQIHVRSTRGKNATGRKISGIEP 125
T + +F +GK S D + + +H + +
Sbjct: 58 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS--------VSI 109
Query: 126 MPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIVSGSENQCI 185
MP D I+ S D I++++++ + G + + DG I S S +Q +
Sbjct: 110 MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG--HREWVRMVRPNQDGTLIASCSNDQTV 167
Query: 186 YIWKTHHDYAK---------FSSVRRDRNDFWEGIKAHNAVVTCAVFAPCPELIIA---- 232
+W K + + I T P P L+
Sbjct: 168 RVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 227
Query: 233 --QMEPDKSESTGYVLNATGRKISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKG 290
+M + L + G+ G IL ++D +R++D ++
Sbjct: 228 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 287
Query: 291 YVNVSSQIKASFSHDGKYIVSGSENQCIYIWK 322
+ + + + F Y+V+GS +Q + +W+
Sbjct: 288 HEHFVTSL--DFHKTAPYVVTGSVDQTVKVWE 317
Score = 71.7 bits (174), Expect = 2e-14
Identities = 31/204 (15%), Positives = 75/204 (36%), Gaps = 22/204 (10%)
Query: 1 MDKTVRLWHISRKECLCCFQHIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAVW 60
DKT+++W + C+ F + +D S S D +R+W + K+
Sbjct: 121 RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKEC--K 178
Query: 61 NEVEGQTKLITAANFCENGKFAVVGSYDGRCIFYTTDQLKYH---------------TQI 105
E+ ++ ++ ++ + G + + T +
Sbjct: 179 AELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM 238
Query: 106 HVRSTRGKNATGRKISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQI 165
+ + G + + G+ G IL ++D +R++D ++ + + + +
Sbjct: 239 CLMTLVGHDNW---VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL 295
Query: 166 KASFSHDGKYIVSGSENQCIYIWK 189
F Y+V+GS +Q + +W+
Sbjct: 296 --DFHKTAPYVVTGSVDQTVKVWE 317
Score = 30.1 bits (66), Expect = 0.41
Identities = 7/24 (29%), Positives = 10/24 (41%)
Query: 301 SFSHDGKYIVSGSENQCIYIWKTH 324
F +VS SE+ I +W
Sbjct: 24 IFHPVFSVMVSASEDATIKVWDYE 47
Score = 29.7 bits (65), Expect = 0.63
Identities = 12/98 (12%), Positives = 31/98 (31%)
Query: 244 YVLNATGRKISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKASFS 303
Y L+ ++ + P ++ S D+ I+++D + KG+ + I S
Sbjct: 11 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 70
Query: 304 HDGKYIVSGSENQCIYIWKTHHDYAKFSSVRRDRNDFW 341
S ++ ++ + +
Sbjct: 71 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVS 108
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 79.8 bits (195), Expect = 5e-17
Identities = 45/340 (13%), Positives = 96/340 (28%), Gaps = 36/340 (10%)
Query: 12 RKECLCCFQHIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAV------WNEVEG 65
E H V + F D Y +G + +++ + D + +
Sbjct: 52 DVELHKSLDHTSVVCCVKFSN-DGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDP 109
Query: 66 QTKLITAANFCENGKFAVVGSYDGRCIFYTTDQLKYHTQIHVRSTRGKNATGRKISGIEP 125
+ +++ + +V S DG+ + + G +
Sbjct: 110 ENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSL 169
Query: 126 MPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIVSGSENQCI 185
+ S + C + A DGKYI +GS ++ +
Sbjct: 170 DYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAV 229
Query: 186 YIWKTHHDYAKFSSVRRDRNDFWEGIKAHNAVVTCAVFAPCPELIIA------------- 232
+W + + + + E H V VF + +++
Sbjct: 230 RVWDSETGF-----LVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQ 284
Query: 233 ------QMEPDKSESTGYVLNATGRKISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSC 286
+ S + + + ++ IL S D + +D + N
Sbjct: 285 NANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLL 344
Query: 287 KYKGYVN----VSSQIKASFSHDGKYIVSGSENQCIYIWK 322
+G+ N V+ +S + +GS + IWK
Sbjct: 345 MLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 384
Score = 54.4 bits (129), Expect = 8e-09
Identities = 50/355 (14%), Positives = 103/355 (29%), Gaps = 49/355 (13%)
Query: 20 QHIDFVTAICFHPRDDRY--FLSGSLDGKLRLWNIPDKKVAVWNEVE--GQTKLITAANF 75
H + L + L+N + + T ++ F
Sbjct: 11 NHSKPIPPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKF 70
Query: 76 CENGKFAVVGSYDGRCIFYTTDQLKYHTQIHVRSTRGKNATGRKISGIEPMPGEDKILVT 135
+G++ G ++ +D ++
Sbjct: 71 SNDGEYLATGCNKTTQVYRVSDG--------------------------------SLVAR 98
Query: 136 SNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIVSGSENQCIYIWKTHHDYA 195
+D D +LN S + + S FS DGK++ +G+E++ I IW +
Sbjct: 99 LSDDSAANKDPENLNTSSSPSSDLYIRS---VCFSPDGKFLATGAEDRLIRIWDIENRKI 155
Query: 196 KFSSVRRDRNDFWEGIKAHNAVVTCAVFAPCPELIIAQMEPDKSESTGYVLNATGRKISG 255
+++ + + + + + + + G
Sbjct: 156 VMILQGHEQDIYSLDYFPSGDKLVSGSGDRT----VRIWDLRTGQCSLTLSIEDGVTTVA 211
Query: 256 IEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKAS-----FSHDGKYIV 310
+ P G I S D +R++D L + + K S F+ DG+ +V
Sbjct: 212 VSPGDG-KYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVV 270
Query: 311 SGSENQCIYIWKTHHDYAKFSSVRRDRNDFWEGIKAHNAVVTCAVFAPCPELIIA 365
SGS ++ + +W + K S + H V E I++
Sbjct: 271 SGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILS 325
Score = 46.7 bits (109), Expect = 3e-06
Identities = 14/58 (24%), Positives = 21/58 (36%), Gaps = 6/58 (10%)
Query: 1 MDKTVRLWHISRKECLCCFQ-HIDFVTAICFHPR-----DDRYFLSGSLDGKLRLWNI 52
D+ V W L Q H + V ++ + F +GS D K R+W
Sbjct: 328 KDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 385
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 75.2 bits (183), Expect = 1e-15
Identities = 36/324 (11%), Positives = 90/324 (27%), Gaps = 23/324 (7%)
Query: 2 DKTVRLWHISRKECLCCFQHIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPD---KKVA 58
D + + H + V A+ R+ +G G +++W+I K
Sbjct: 31 DALIGPGIPRHARQINTLNHGEVVCAVTISN-PTRHVYTGG-KGCVKVWDISHPGNKSPV 88
Query: 59 VWNEVEGQTKLITAANFCENGKFAVVGSYDGRCIFYTTDQLKYHTQIHVRSTRGKNATGR 118
+ + I + +G +VG + + + S+
Sbjct: 89 SQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALA 148
Query: 119 KISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIVS 178
+ + +R +++S+ ++ V
Sbjct: 149 ISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVR 208
Query: 179 GSENQCIYIWKTHHDYAKFSSVRRDRNDFWEGIKAHNAVVTCAVFAPCPELIIAQMEPDK 238
+ + + H ++ S+ W + ++ V + + E
Sbjct: 209 SWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESC- 267
Query: 239 SESTGYVLNATGRKISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQI 298
+ ++ + T D+ + + + K +V S
Sbjct: 268 --------------VLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLS-- 311
Query: 299 KASFSHDGKYIVSGSENQCIYIWK 322
S D KYIV+GS ++ +++
Sbjct: 312 -CDISVDDKYIVTGSGDKKATVYE 334
Score = 55.6 bits (132), Expect = 3e-09
Identities = 10/52 (19%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Query: 1 MDKTVRLWHISRKECLCCFQHIDFVTAICFHPRDDRYFLSGSLDGKLRLWNI 52
D + W + + V + DD+Y ++GS D K ++ +
Sbjct: 285 KDNLLNAWRTPYGASIFQSKESSSVLSCDISV-DDKYIVTGSGDKKATVYEV 335
Score = 38.3 bits (87), Expect = 0.001
Identities = 28/358 (7%), Positives = 86/358 (24%), Gaps = 50/358 (13%)
Query: 42 SLDGKLRLWNIPDKKVAVWNEVE--------GQTKLITAANFCENGKFAVVGSYDGRCIF 93
+ DG+++ P + +++ A + G G
Sbjct: 18 TADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKV 76
Query: 94 YTTDQLKYHTQIHVRSTRGKNATGRKISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSC 153
+ + + ++ I + +P + L+ ++
Sbjct: 77 WDISHPGNKSPVSQLDCLNRDNY---IRSCKLLP-DGCTLIVGGEASTLSIWDLAAPTPR 132
Query: 154 KYKGYVNVSSQIKASFSHDGKYIVSGSENQCIYIWKTHHDYAKFSSVRRDRNDFWEGIKA 213
+ + A + + H+ + + +
Sbjct: 133 IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS 192
Query: 214 HNAVVTCAVFAPCPELIIAQMEPDKSESTGYVLNATGRKISGIEPMPGEDKILVTSNDSR 273
++ E + + + +
Sbjct: 193 NDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWL--------AVGME 244
Query: 274 IRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIVSGSENQCIYIWKTHHDYAKFSSV 333
++ +N KY+ +++ S + F++ GK+ VS ++ + W+T + + F S
Sbjct: 245 SSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS- 303
Query: 334 RRDRNDFWEGIKAHNAVVTCAVFAPCPELIIAQMEPDKSESTGYVLVSADFNGVIRVF 391
++ V + +V+ + V+
Sbjct: 304 ------------KESSSVLSCDISV----------------DDKYIVTGSGDKKATVY 333
Score = 37.9 bits (86), Expect = 0.002
Identities = 17/146 (11%), Positives = 46/146 (31%), Gaps = 13/146 (8%)
Query: 1 MDKTVRLWHISRKECLCCFQHIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAVW 60
+D TVR W + L + ++ + P + + + +
Sbjct: 203 LDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAV----GMESSNVEVLHVNKPDK 258
Query: 61 NEVEGQTKLITAANFCENGKFAVVGSYDGRCIFYTTDQLKYHTQIHVRSTRGKNATGRKI 120
++ + + F GK+ V D + T + ++ ++ +
Sbjct: 259 YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTP-----YGASIFQSKESSS----V 309
Query: 121 SGIEPMPGEDKILVTSNDSRIRLYDL 146
+ + I+ S D + +Y++
Sbjct: 310 LSCDISVDDKYIVTGSGDKKATVYEV 335
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 74.4 bits (181), Expect = 2e-15
Identities = 43/310 (13%), Positives = 90/310 (29%), Gaps = 33/310 (10%)
Query: 21 HIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAVWNEVEGQTKLITAANFCENGK 80
H+ + A+ + D R +S S DGKL +W+ + + ++ + + +G
Sbjct: 54 HLAKIYAMHWGT-DSRLLVSASQDGKLIIWDSYTTN--KVHAIPLRSSWVMTCAYAPSGN 110
Query: 81 FAVVGSYDGRCIFYTTDQLKYHTQIHVRSTRGKNATGRKISGIEPMPGEDKILVTSNDSR 140
+ G D C Y + + ++ + T
Sbjct: 111 YVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWD 170
Query: 141 IRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIVSGSENQCIYIWKTHHDYAKFSSV 200
I + + S + D + VSG+ + +W D +
Sbjct: 171 IETGQ-------QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLW----DVREGMCR 219
Query: 201 RRDRNDFWEGIKAHNAVVTCAVFAPCPELIIA---------QMEPDKSESTGYVLNATGR 251
+ H + + F P E Y +
Sbjct: 220 QT--------FTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIIC 271
Query: 252 KISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIVS 311
I+ + +L +D ++D + + G+ N S + + DG + +
Sbjct: 272 GITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCL--GVTDDGMAVAT 329
Query: 312 GSENQCIYIW 321
GS + + IW
Sbjct: 330 GSWDSFLKIW 339
Score = 72.8 bits (177), Expect = 8e-15
Identities = 33/189 (17%), Positives = 62/189 (32%), Gaps = 54/189 (28%)
Query: 1 MDKTVRLWHISRKECLCCFQ-HIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAV 59
D + +LW + C F H + AICF P + F +GS D RL+++ + +
Sbjct: 204 CDASAKLWDVREGMCRQTFTGHESDINAICFFP-NGNAFATGSDDATCRLFDLRADQELM 262
Query: 60 WNEVEGQTKLITAANFCENGKFAVVGSYDGRCIFYTTDQLKYHTQIHVRSTRGKNATGRK 119
+ IT+ +F ++G+ + G D
Sbjct: 263 TYSHDNIICGITSVSFSKSGRLLLAGYDDF------------------------------ 292
Query: 120 ISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIVSG 179
++D + + G+ N S + + DG + +G
Sbjct: 293 --------------------NCNVWDALKADRAGVLAGHDNRVSCL--GVTDDGMAVATG 330
Query: 180 SENQCIYIW 188
S + + IW
Sbjct: 331 SWDSFLKIW 339
Score = 50.1 bits (118), Expect = 2e-07
Identities = 42/278 (15%), Positives = 68/278 (24%), Gaps = 99/278 (35%)
Query: 1 MDKTVRLWHISRKECLCCFQHIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAVW 60
D T LW I + F D R F+SG+ D +LW++ +
Sbjct: 162 GDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCR-- 219
Query: 61 NEVEGQTKLITAANFCENGKFAVVGSYDGRCIFYTTDQLKYHTQIHVRSTRGKNATGRKI 120
G I A F NG GS D C + +
Sbjct: 220 QTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQEL------------------ 261
Query: 121 SGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIVSGS 180
Y + SFS G+ +++G
Sbjct: 262 --------------------------------MTYSHDNIICGITSVSFSKSGRLLLAGY 289
Query: 181 ENQCIYIWKTHHDYAKFSSVRRDRNDFWEGIKAHNAVVTCAVFAPCPELIIAQMEPDKSE 240
++ +W D K + H+ V+C +
Sbjct: 290 DDFNCNVW----DALKADRAGV--------LAGHDNRVSCLGVTDDGMAV---------- 327
Query: 241 STGYVLNATGRKISGIEPMPGEDKILVTSNDSRIRLYD 278
ATG S DS +++++
Sbjct: 328 -------ATG------------------SWDSFLKIWN 340
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 71.2 bits (172), Expect = 2e-14
Identities = 31/301 (10%), Positives = 74/301 (24%), Gaps = 16/301 (5%)
Query: 21 HIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAVWNEVEGQTKLITAANFCENGK 80
H +TA+ D + S +G + W+I + + +IT G
Sbjct: 11 HNKAITALSSSA-DGKTLFSADAEGHINSWDISTGI-SNRVFPDVHATMITGIKTTSKGD 68
Query: 81 FAVVGSYDGRCIFYTTDQLKYHTQIHVRSTRGKNATGRKISGIEPMPGEDKILVTSNDSR 140
V D + ++ + + D
Sbjct: 69 LFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQP--------------LGLAVSADGDIA 114
Query: 141 IRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIVSGSENQCIYIWKTHHDYAKFSSV 200
+ S V +S + K V+ +
Sbjct: 115 VAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVK 174
Query: 201 RRDRNDFWEGIKAHNAVVTCAVFAPCPELIIAQMEPDKSESTGYVLNATGRKISGIEPMP 260
+ N ++I + + + K++ + P
Sbjct: 175 TIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSP 234
Query: 261 GEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIVSGSENQCIYI 320
++ S D+ + ++++ + + S + + + IVS ++ I
Sbjct: 235 DNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKF 294
Query: 321 W 321
W
Sbjct: 295 W 295
Score = 45.4 bits (105), Expect = 6e-06
Identities = 9/57 (15%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Query: 1 MDKTVRLWHISRKECLCCFQ----HIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIP 53
+D +V +W++++ + V ++ + ++ +S D ++ WN+P
Sbjct: 244 LDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWL--NETTIVSAGQDSNIKFWNVP 298
Score = 36.9 bits (83), Expect = 0.004
Identities = 12/87 (13%), Positives = 21/87 (24%)
Query: 8 WHISRKECLCCFQHIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAVWNEVEGQT 67
+ + A D+ +GSLD + +WN+
Sbjct: 209 ANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHA 268
Query: 68 KLITAANFCENGKFAVVGSYDGRCIFY 94
+ N V D F+
Sbjct: 269 MSSVNSVIWLNETTIVSAGQDSNIKFW 295
Score = 35.3 bits (79), Expect = 0.010
Identities = 33/280 (11%), Positives = 76/280 (27%), Gaps = 17/280 (6%)
Query: 2 DKTVRLWHISRKECLCCFQ--HIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAV 59
+ + W IS F H +T I + D + +S D L++ V
Sbjct: 33 EGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSW--DDHLKVVPAGGSGVDS 90
Query: 60 WNEVEGQTKLITAANFCENGKFAVVGSYDGRCIFYTTDQLKYHTQIHVRSTRGKNATGRK 119
V + V + Y+ +L +
Sbjct: 91 SKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISY------------N 138
Query: 120 ISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIVSG 179
S + + + V DS++ +Y L ++S A ++ + +
Sbjct: 139 SSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATD 198
Query: 180 SENQCIYIWKTHHDYAKFSSVRRDRNDFWEGIKAHNAVVTCAVFAPCPELIIAQMEPDKS 239
+ I ++ ++ + V A + +I+ M
Sbjct: 199 QSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSD 258
Query: 240 ESTGYVLNATGRKISGIEPMPGEDKILVTSNDSRIRLYDL 279
++ + + I+ DS I+ +++
Sbjct: 259 HPIIIKGAHAMSSVNSVIWLNE-TTIVSAGQDSNIKFWNV 297
Score = 31.1 bits (68), Expect = 0.24
Identities = 8/24 (33%), Positives = 9/24 (37%)
Query: 301 SFSHDGKYIVSGSENQCIYIWKTH 324
S S DGK + S I W
Sbjct: 19 SSSADGKTLFSADAEGHINSWDIS 42
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 70.7 bits (171), Expect = 3e-14
Identities = 35/306 (11%), Positives = 82/306 (26%), Gaps = 7/306 (2%)
Query: 24 FVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAVWNEVEG-QTKLITAANF--CENGK 80
F T + + P + +R + D KV + G + ++T F + +
Sbjct: 19 FTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQ 78
Query: 81 FAVVGSYDGRCIFYTTDQLKYHTQIHVRSTRGKNATGRKISGIE--PMPGEDKILVTSND 138
+ G G+ I + K + V IS I ++ D
Sbjct: 79 YLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRD 138
Query: 139 SRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIVSGSENQCIYIWKTHHDYAKFS 198
+ N + G+ + S + + G + ++ ++
Sbjct: 139 NFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASD 198
Query: 199 SVRRDRNDFWEGIKAHNAVVTCAVFAPCPELIIAQMEPDKSESTGYVLNATGRKISGIEP 258
+ F ++ + I + +
Sbjct: 199 RTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFAL 258
Query: 259 MPGEDKILVT-SNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDG-KYIVSGSENQ 316
+ + T D+ IR++D+ K+ + G I+S S +
Sbjct: 259 SWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDG 318
Query: 317 CIYIWK 322
+ ++
Sbjct: 319 TLNFYE 324
Score = 49.1 bits (115), Expect = 4e-07
Identities = 11/55 (20%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 1 MDKTVRLWHISRKECLCCFQ---HIDFVTAICFHPRDDRYFLSGSLDGKLRLWNI 52
D T+R+W ++ +C+ + + + +S SLDG L + +
Sbjct: 271 ADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325
Score = 44.1 bits (102), Expect = 2e-05
Identities = 14/190 (7%), Positives = 36/190 (18%), Gaps = 3/190 (1%)
Query: 1 MDKTVRLWHISRKECLCCFQHIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAVW 60
D L C + D ++
Sbjct: 137 RDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSA 196
Query: 61 NEVEGQTKLITAANFCENGKFAVVGSYDGRCIFYTTDQLKYHTQIHVRSTRGKNATGRKI 120
++ + + + ++ +
Sbjct: 197 SDRTHHKQ--GSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGG 254
Query: 121 SGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDG-KYIVSG 179
K D+ IR++D+ K+ + G I+S
Sbjct: 255 IFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISL 314
Query: 180 SENQCIYIWK 189
S + + ++
Sbjct: 315 SLDGTLNFYE 324
Score = 33.4 bits (74), Expect = 0.041
Identities = 17/112 (15%), Positives = 36/112 (32%), Gaps = 8/112 (7%)
Query: 260 PGEDKILVTSNDSR-IRLYDLRDLNLSCKYKGYVNVSSQIKA---SFSHDGKYIVSGSEN 315
P + I S +R D D + + + SS + S +Y+ SG E+
Sbjct: 27 PTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDES 86
Query: 316 QCIYIWKTHHDYAKFSSVRRDRNDFWEGIKAHNAVVTCAVFAPCPELIIAQM 367
+ +W D S +++F + ++ + +
Sbjct: 87 GKVIVWGWTFDKESNSVEVNVKSEF----QVLAGPISDISWDFEGRRLCVVG 134
Score = 30.7 bits (67), Expect = 0.28
Identities = 19/140 (13%), Positives = 41/140 (29%), Gaps = 6/140 (4%)
Query: 8 WHISRKECLCCFQHIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAVWNEVEGQT 67
+ FV + F P + ++ D K+ ++ + + E + +
Sbjct: 191 PFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEP 250
Query: 68 KLITAAN-FCENGKFAVVGSYDGRCIFYTTDQLKYHTQIHVRSTRGKNATGRKISGIEPM 126
+ + D + K + T K G + G+
Sbjct: 251 VQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKW----TLDKQQLGNQQVGVVA- 305
Query: 127 PGEDKILVTSNDSRIRLYDL 146
G +I+ S D + Y+L
Sbjct: 306 TGNGRIISLSLDGTLNFYEL 325
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 67.6 bits (163), Expect = 6e-13
Identities = 34/357 (9%), Positives = 85/357 (23%), Gaps = 57/357 (15%)
Query: 21 HIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAVWNE-----------VEGQTKL 69
H + ++ + +S S DG L++W+ + + L
Sbjct: 13 HDADIFSVSACNS---FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVL 69
Query: 70 ITAANFCENGKFAVVGSYDGRCIFY-------TTDQLKYHTQIHVRSTRGKNATGRKISG 122
S+ G +FY T + + + + K
Sbjct: 70 QAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGA 129
Query: 123 IEPMPGEDKILVTSNDSRIRLYDL---------------RDLNLSCKYKGYVNVSSQIKA 167
+++ T ++ L L + + S +
Sbjct: 130 SNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATS 189
Query: 168 -SFSHDGKYIVSGSENQCIYIWKTHHDYAKFSSVRRDRNDFWE----------------- 209
S G I +G N + I + ++ +
Sbjct: 190 VDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAI 248
Query: 210 GIKAHNAVVTCAVFAPCPELIIAQMEPDKSESTGYVLNATGRKISGIEPMPGEDKILVTS 269
+++ E I + P S A + + + +
Sbjct: 249 AHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG 308
Query: 270 NDSRIRLYDLRDLNLSCKYKGYVN-VSSQIKA-SFSHDGKYIVSGSENQCIYIWKTH 324
D ++R +D++ + + + + + G + ++ K
Sbjct: 309 WDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGW 365
Score = 39.5 bits (90), Expect = 6e-04
Identities = 21/215 (9%), Positives = 48/215 (22%), Gaps = 40/215 (18%)
Query: 168 SFSHDGKYIVSGSENQCIYIWKTHHDYAKFSSVRRDRNDFWEGIKAHNAVVTCAVFAPCP 227
S S + VS S + + +W + + + + H V+
Sbjct: 19 SVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFE 78
Query: 228 ELIIAQMEPDKS-----------------------ESTGYVLNATGRKISGIEPMPGEDK 264
++A +S + K +
Sbjct: 79 LCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHR 138
Query: 265 ILVTSNDSRIRLYDL---------------RDLNLSCKYKGYVNVSSQIKA-SFSHDGKY 308
++ T ++ L L + + S + S G
Sbjct: 139 LVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-L 197
Query: 309 IVSGSENQCIYIWKTHHDYAKFSSVRRDRNDFWEG 343
I +G N + I + ++ +
Sbjct: 198 IATGFNNGTVQISELSTLRPLYNFESQHSMINNSN 232
Score = 34.1 bits (76), Expect = 0.032
Identities = 11/91 (12%), Positives = 26/91 (28%), Gaps = 15/91 (16%)
Query: 301 SFSHDGKYIVSGSENQCIYIWKTHHDYAKFSSVRRDRNDFWEGIKAHNAVVTCAVFAPCP 360
S S + VS S + + +W + + + + H V+
Sbjct: 19 SVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFE 78
Query: 361 ELIIAQMEPDKSESTGYVLVSADFNGVIRVF 391
++A + F+G + +
Sbjct: 79 LCLVA---------------TTSFSGDLLFY 94
Score = 32.5 bits (72), Expect = 0.083
Identities = 7/50 (14%), Positives = 13/50 (26%), Gaps = 6/50 (12%)
Query: 1 MDKTVRLWHISRKECLCCFQ-HIDFV----TAICFHPRDDRYFLSGSLDG 45
D +R W + KE + H D + + +
Sbjct: 309 WDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDE-HGDSLAEPGVFD 357
Score = 27.9 bits (60), Expect = 2.6
Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 1 MDKTVRLWHISRKECLCCFQHIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKV 57
++ + S + L F H +V ++ F+ + S DGKLR W++ K+
Sbjct: 268 RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE-TLCSAGWDGKLRFWDVKTKER 323
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 62.5 bits (150), Expect = 2e-11
Identities = 41/350 (11%), Positives = 105/350 (30%), Gaps = 50/350 (14%)
Query: 8 WHISRKECLCCFQ-HIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAVWNEVEGQ 66
W + + H D V C +SGS D L++W+ K + G
Sbjct: 1 WRRGELKSPKVLKGHDDHVIT-CLQF-CGNRIVSGSDDNTLKVWSAVTGK--CLRTLVGH 56
Query: 67 TKLITAANFCENGKFAVVGSYDGRCIFYTTDQLKYHTQIHVRSTRGKNATGRKI------ 120
T + ++ +N + + T + + H + R + +++
Sbjct: 57 TGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRD 116
Query: 121 ----------------------SGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGY 158
+ +++ + D ++++D +G+
Sbjct: 117 ATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGH 176
Query: 159 VNVSSQIKASFSHDGKYIVSGSENQCIYIWKTHHDYAKFSSVRRDRNDFWEGIKAHNAVV 218
+ S DG ++VSGS + I +W + G++ + ++
Sbjct: 177 ----TNRVYSLQFDGIHVVSGSLDTSIRVW--DVETGNCIHTLTGHQSLTSGMELKDNIL 230
Query: 219 TCAVFAPCPELIIAQMEPDKSESTGYVLNATGRKISGIEPMPGEDKILVTSNDSRIRLYD 278
+ + + + + + + ++ ++ +S+D ++L+D
Sbjct: 231 VSG----NADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWD 286
Query: 279 LRDLNLSCKYKGYVNVSSQ---IKASFSHDGKYIVSGSENQC----IYIW 321
L+ + S + S+ GS N + +
Sbjct: 287 LKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVL 336
Score = 39.0 bits (89), Expect = 7e-04
Identities = 27/195 (13%), Positives = 51/195 (26%), Gaps = 35/195 (17%)
Query: 162 SSQIKASFSHDGKYIVSGSENQCIYIWKTH----------HDYAKFSSVRRDRNDFWEGI 211
+ G IVSGS++ + +W H +SS RD
Sbjct: 16 DDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGST 75
Query: 212 KAHNAVVTCAVFAPCPELIIAQMEPDKSESTGYVLNAT---------------------G 250
V L + + G
Sbjct: 76 DRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMG 135
Query: 251 RKISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIV 310
+ +++ + D ++++D +G+ + S DG ++V
Sbjct: 136 HVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGH----TNRVYSLQFDGIHVV 191
Query: 311 SGSENQCIYIWKTHH 325
SGS + I +W
Sbjct: 192 SGSLDTSIRVWDVET 206
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 61.8 bits (148), Expect = 3e-11
Identities = 24/298 (8%), Positives = 60/298 (20%), Gaps = 10/298 (3%)
Query: 25 VTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAVWNEVEGQTKLITAANFCENGKFAVV 84
+ P + + + + T A +G +
Sbjct: 20 AVVLGNTP-AGDKIQYCN-GTSVYTVPVGSLTDT--EIYTEHSHQTTVAKTSPSGYYCAS 75
Query: 85 GSYDGRCIFYTTDQLKYHTQIHVRSTRGKNATGRKISGIEPMPGEDKILVTSNDSRIRLY 144
G G + T Q + + + G + + ++
Sbjct: 76 GDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWD----SESKRIAAVGEGRERFGHVF 131
Query: 145 DLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIVSGSENQCIYIWKTHHDYAKFSSVRRDR 204
+ G + + S + I +N +
Sbjct: 132 LFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKF 191
Query: 205 NDFWEGIKAHNAVVTCAVFAPCPELIIAQMEPDKSESTGYVLNATGRKISGIEPMPGEDK 264
+ + + N +
Sbjct: 192 VHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGT 251
Query: 265 ILVT-SNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIVSGSENQCIYIW 321
+ + S D I+++++ L + + Q + +VS S N I
Sbjct: 252 KIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQ-LGIIWTKQALVSISANGFINFV 308
Score = 43.7 bits (101), Expect = 2e-05
Identities = 24/181 (13%), Positives = 45/181 (24%), Gaps = 2/181 (1%)
Query: 8 WHISRKECLCCFQHIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAVWNEVEGQT 67
+ + R F S + + T
Sbjct: 130 VFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHT 189
Query: 68 KLITAANFCENGKFAVVGSYDGRCIFYTTDQLKYHTQIHVRSTRGKNATGRKISGIEPMP 127
K + + + +G DG + Y S + +G + P
Sbjct: 190 KFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFG-LTWSP 248
Query: 128 GEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIVSGSENQCIYI 187
KI S D I+++++ L + + Q + +VS S N I
Sbjct: 249 DGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQ-LGIIWTKQALVSISANGFINF 307
Query: 188 W 188
Sbjct: 308 V 308
Score = 42.2 bits (97), Expect = 6e-05
Identities = 8/53 (15%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Query: 1 MDKTVRLWHISRKECLCCFQ-HIDFVTAICFHPRDDRYFLSGSLDGKLRLWNI 52
DKT+++W+++ + + +S S +G + N
Sbjct: 258 ADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNP 310
Score = 40.3 bits (92), Expect = 3e-04
Identities = 13/90 (14%), Positives = 22/90 (24%), Gaps = 1/90 (1%)
Query: 8 WHISRKECLCCFQHIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAVWNEVEGQT 67
++ D S S D +++WN+ KV G
Sbjct: 223 KTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKV-EKTIPVGTR 281
Query: 68 KLITAANFCENGKFAVVGSYDGRCIFYTTD 97
+ V S +G F +
Sbjct: 282 IEDQQLGIIWTKQALVSISANGFINFVNPE 311
Score = 36.4 bits (82), Expect = 0.004
Identities = 13/79 (16%), Positives = 23/79 (29%), Gaps = 4/79 (5%)
Query: 264 KILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKA-SFSHDGKYIVSGSENQCIYIWK 322
+ N + + + L + Y + S Q S G Y SG + + IW
Sbjct: 30 DKIQYCNGTSVYTVPVGSLTDTEIYTEH---SHQTTVAKTSPSGYYCASGDVHGNVRIWD 86
Query: 323 THHDYAKFSSVRRDRNDFW 341
T + +
Sbjct: 87 TTQTTHILKTTIPVFSGPV 105
Score = 36.4 bits (82), Expect = 0.005
Identities = 29/285 (10%), Positives = 62/285 (21%), Gaps = 33/285 (11%)
Query: 131 KILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKA-SFSHDGKYIVSGSENQCIYIWK 189
+ N + + + L + Y + S Q S G Y SG + + IW
Sbjct: 30 DKIQYCNGTSVYTVPVGSLTDTEIYTEH---SHQTTVAKTSPSGYYCASGDVHGNVRIWD 86
Query: 190 THHDYAKFSSVRRDRNDFWEGIKAHNAVVTCAVFAPCPELIIAQMEPDKSESTGYVLNAT 249
T + I + V + + I A E + ++
Sbjct: 87 TTQTT----------HILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFL---- 132
Query: 250 GRKISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYI 309
+ + + + V+ F +
Sbjct: 133 ------FDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFG 186
Query: 310 VSGSENQCIYIWKTHHDYAKFSSVRRDRNDFWEGIKAHNAVVTCAVFAPCPELIIAQMEP 369
+ +A + +
Sbjct: 187 EHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTG---VFEDDSLKNVAHSGSVFG 243
Query: 370 DKSESTGYVLVSADFNGVIRVF------LNKTKPKHSSLPVSALA 408
G + SA + I+++ + KT P + + L
Sbjct: 244 LTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLG 288
Score = 26.4 bits (56), Expect = 6.0
Identities = 19/144 (13%), Positives = 36/144 (25%), Gaps = 12/144 (8%)
Query: 8 WHISRKECLCCFQHIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVA-----VWNE 62
+ + F + D F S DG + L+N D +
Sbjct: 174 FEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLK 233
Query: 63 VEGQTKLITAANFCENGKFAVVGSYDGRCIFYTTDQLKYHTQIHVRSTRGKNATGRKISG 122
+ + + +G S D + LK I V + G +
Sbjct: 234 NVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTK 293
Query: 123 IEPMPGEDKILVTSNDSRIRLYDL 146
++ S + I +
Sbjct: 294 -------QALVSISANGFINFVNP 310
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 61.8 bits (148), Expect = 3e-11
Identities = 26/328 (7%), Positives = 80/328 (24%), Gaps = 44/328 (13%)
Query: 1 MDKTVRLWHISRK----ECLCCFQHIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKK 56
D ++ ++ + + L ++ + F D G++ G++ ++
Sbjct: 31 WDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSP 90
Query: 57 VAVWNEVEGQTKLITAANFCENGKFAVVGSYDGRCIFYTTDQLKYHTQIHVRSTRGKNAT 116
I + K + + + ++ N T
Sbjct: 91 SFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNS---NNT 147
Query: 117 GRKISGIEPMPGEDKILVTSNDSRIRLYDLRDLNL--SCKYKGYVNVSSQIKASFSHDGK 174
K +++V N+S+++ + L + + + A + +
Sbjct: 148 KVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQE 207
Query: 175 YIVSGSENQCIYIWKTHHDYAKFSSVRRDRNDFWEGIKAHNAVVTCAVFAPCPELIIAQM 234
S + + + ++S +R +
Sbjct: 208 GYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYP-------------- 253
Query: 235 EPDKSESTGYVLNATGRKISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNV 294
++ IE P + +D I ++L+ + +
Sbjct: 254 ------------------VNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNED 295
Query: 295 SSQIKASFSHDGKYIVSGSENQCIYIWK 322
S + + + +
Sbjct: 296 SV---VKIACSDNILCLATSDDTFKTNA 320
Score = 46.4 bits (108), Expect = 3e-06
Identities = 24/258 (9%), Positives = 69/258 (26%), Gaps = 9/258 (3%)
Query: 120 ISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKA-SFSHDGKYIV- 177
IS I+ +P + +L+TS D + +Y + + + +F + +
Sbjct: 14 ISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIY 73
Query: 178 --SGSENQCIYIWKTHHDYAKFSSVRRDRNDFWEGIKAHNAVVTCAVFAPCPELIIAQME 235
+ + ++ + + ++ + +
Sbjct: 74 VGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYG 133
Query: 236 PDKSESTGYVLNATGRKISGIEPMPGEDKILVTSNDSRIRLYDLRDLNL--SCKYKGYVN 293
N T K +++V N+S+++ + L + +
Sbjct: 134 DGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLK 193
Query: 294 VSSQIKASFSHDGKYIVSGSENQCIYIWKTHHDYAKFSSVRRDRNDFW---EGIKAHNAV 350
+ A + + S + + + ++S +R
Sbjct: 194 YQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYP 253
Query: 351 VTCAVFAPCPELIIAQME 368
V F+P + +
Sbjct: 254 VNSIEFSPRHKFLYTAGS 271
Score = 44.1 bits (102), Expect = 2e-05
Identities = 6/55 (10%), Positives = 18/55 (32%), Gaps = 1/55 (1%)
Query: 1 MDKTVRLWHISRKECLCCFQHIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDK 55
D + W++ ++ + F + + + D + D + D+
Sbjct: 271 SDGIISCWNLQTRKKIKNFAKFNEDSVVKIAC-SDNILCLATSDDTFKTNAAIDQ 324
Score = 35.2 bits (79), Expect = 0.012
Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 2/85 (2%)
Query: 245 VLNATGRKISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKA-SFS 303
+ A IS I+ +P + +L+TS D + +Y + + + +F
Sbjct: 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFI 65
Query: 304 HD-GKYIVSGSENQCIYIWKTHHDY 327
+ I G+ I
Sbjct: 66 DNTDLQIYVGTVQGEILKVDLIGSP 90
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 60.3 bits (144), Expect = 1e-10
Identities = 32/327 (9%), Positives = 90/327 (27%), Gaps = 25/327 (7%)
Query: 21 HIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAVWNEVEGQTKLITAANFCENGK 80
++ ++ ++ D + ++ ++ K +E++ +T ++ +
Sbjct: 6 LVEPISCHAWNK-DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSN 64
Query: 81 FAVVGSYDGRCIFYTTDQLKYHTQIHVRSTRGKNATGRKISGIEPMPGEDKILVTSNDSR 140
V D +T + + + + P + + S
Sbjct: 65 RIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAA----RCVRWAPNEKKFAVGSGSRVIS 120
Query: 141 IRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIVSGSENQCIYIWKTHHDYAKFSSV 200
I ++ + CK+ S+ + + + + +GS + I+ + +
Sbjct: 121 ICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPA 180
Query: 201 RRDRNDFWEGIKAHNAVVTC--AVFAPCPELIIAQMEPDKSESTGYVLNATGRKISGIEP 258
+ + V C +++ +ST + +A +
Sbjct: 181 PTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLA 240
Query: 259 MPG----------EDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKAS------- 301
E ++ +D L+ + G ++V Q
Sbjct: 241 SETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARER 300
Query: 302 -FSHDGKYIVSGSENQCIYIWKTHHDY 327
+ D K GS + H +
Sbjct: 301 FQNLDKKASSEGSAAAGAGLDSLHKNS 327
Score = 59.9 bits (143), Expect = 2e-10
Identities = 37/335 (11%), Positives = 87/335 (25%), Gaps = 21/335 (6%)
Query: 2 DKTVRLWHISRKECLCCFQ---HIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVA 58
+ V ++ S + + + H VT + + P D ++ D +W + +
Sbjct: 28 NHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAP-DSNRIVTCGTDRNAYVWTLKGRTWK 86
Query: 59 VWNEVEGQTKLITAANFCENGKFAVVGSYDGRCIFYTTDQLKYHTQIHVRSTRGKNATGR 118
+ + + N K VGS +Q ++
Sbjct: 87 PTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRST--- 143
Query: 119 KISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKG----YVNVSSQIKASFSHDGK 174
+ ++ P + S D + R++ + + ++ S
Sbjct: 144 -VLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCG 202
Query: 175 YIVSGSENQCIYIWKTHHDYAKFSSVRRDRNDFWEGIKAHNAVVTCAVFAPCPELIIAQM 234
++ + + D+ + + + F L+ A
Sbjct: 203 WVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGH 262
Query: 235 EPDKSESTGYVLNATGRKISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNV 294
+ Y A G +P + + R + D + + G
Sbjct: 263 D-CFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLD 321
Query: 295 SSQIKA----SFSHDGKY----IVSGSENQCIYIW 321
S + S GK + + + IW
Sbjct: 322 SLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIW 356
Score = 43.7 bits (101), Expect = 2e-05
Identities = 11/82 (13%), Positives = 27/82 (32%)
Query: 260 PGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIVSGSENQCIY 319
+I + N+ + +Y+ ++ + ++ D IV+ ++ Y
Sbjct: 17 KDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAY 76
Query: 320 IWKTHHDYAKFSSVRRDRNDFW 341
+W K + V N
Sbjct: 77 VWTLKGRTWKPTLVILRINRAA 98
Score = 41.0 bits (94), Expect = 2e-04
Identities = 27/298 (9%), Positives = 77/298 (25%), Gaps = 23/298 (7%)
Query: 1 MDKTVRLWHISRKECLCCFQHIDFVTAICFHPRDDRYFLS--GSLDGKLRLWNIPDKK-- 56
D+ +W + + + A GS + + +
Sbjct: 71 TDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDW 130
Query: 57 VAVWNEVEGQTKLITAANFCENGKFAVVGSYDGRCIFYTTD----------QLKYHTQIH 106
+ + + + ++ N GS D +C ++
Sbjct: 131 WVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPF 190
Query: 107 VRSTRGKNATGRKISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIK 166
+++ + G+ ++ S+DS + L D +
Sbjct: 191 GELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKM--AVATLASETLPLLA 248
Query: 167 ASFSHDGKYIVSGSENQ-CIYIWKTHHDYAKFSSVRRDRNDFWEGIKAHNAVVTCAVFAP 225
+F + + +G + ++ + + F + + F
Sbjct: 249 VTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQS-----SQRGLTARERFQN 303
Query: 226 CPELIIAQMEPDKSESTGYVLNATGRKISGIEPMPGEDKILVT-SNDSRIRLYDLRDL 282
+ ++ + + +IS + + T D + ++D+R L
Sbjct: 304 LDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSL 361
Score = 37.5 bits (85), Expect = 0.002
Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 10/64 (15%)
Query: 301 SFSHDGKYIVSGSENQCIYIWKTHHDYAKFSSVRRDRNDFWEGIKAHNAVVTCAVFAPCP 360
+++ D I N ++I++ + +K HN VT +AP
Sbjct: 14 AWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHE----------LKEHNGQVTGVDWAPDS 63
Query: 361 ELII 364
I+
Sbjct: 64 NRIV 67
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 57.2 bits (136), Expect = 1e-09
Identities = 14/195 (7%), Positives = 46/195 (23%), Gaps = 13/195 (6%)
Query: 1 MDKTVRLWHISRKECLCCFQHIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAVW 60
+ + + ++ + ++ A F S + +
Sbjct: 157 VMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSK-NLYYLSYRSLDPSPDRVVLNFSFE 215
Query: 61 NE-----VEGQTKLITAANFCENGKFAVVGSYDGRCIFYTTDQLKYHTQIHVRSTRGKNA 115
+ + G YD ++ + + + +++
Sbjct: 216 VVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESS 275
Query: 116 TGRKISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKY 175
S + YD++ ++ ++ S D K
Sbjct: 276 I-LIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVKNNLTDLR------LSADRKT 328
Query: 176 IVSGSENQCIYIWKT 190
++ ++ IY +
Sbjct: 329 VMVRKDDGKIYTFPL 343
Score = 56.0 bits (133), Expect = 2e-09
Identities = 29/332 (8%), Positives = 73/332 (21%), Gaps = 21/332 (6%)
Query: 2 DKTVRLWHISRKECLCCFQHIDFVTAICFHPRDDRYFLSGSLDGK-LRLWNIPDKKVAVW 60
+ +S L + + F+ G+ +G L +++ K +
Sbjct: 23 RGQAFIQDVSGTYVLK-VPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKF 81
Query: 61 NEVEGQTKLITAANFCENGKFAVVGSYDGRCIFYTTDQLKYHTQIHVRSTRGKNATGRKI 120
E + ++ + T + + +
Sbjct: 82 EE-NLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSR 140
Query: 121 SGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIVSGS 180
P + I +YD+ + + + F D K + S
Sbjct: 141 FIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPA---FDADSKNLYYLS 197
Query: 181 ENQCIYIWKTHHDYAKFSSVRRDR---------NDFWEGIKAHNAVVTCAVFAPCPELII 231
F V + N ++ + +
Sbjct: 198 YRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSS 257
Query: 232 AQMEPDKSESTGYVLNATGRKISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGY 291
L ++ S + YD++ ++
Sbjct: 258 PINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVKNNL 317
Query: 292 VNVSSQIKASFSHDGKYIVSGSENQCIYIWKT 323
++ S D K ++ ++ IY +
Sbjct: 318 TDLR------LSADRKTVMVRKDDGKIYTFPL 343
Score = 41.8 bits (96), Expect = 1e-04
Identities = 5/55 (9%), Positives = 20/55 (36%), Gaps = 4/55 (7%)
Query: 2 DKTVRLWHISRKECLCCFQHIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKK 56
+ + + ++ + + +T + D + + DGK+ + + +
Sbjct: 297 KGVLLKYDVKTRKVT---EVKNNLTDLRLSA-DRKTVMVRKDDGKIYTFPLEKPE 347
Score = 39.5 bits (90), Expect = 5e-04
Identities = 11/91 (12%), Positives = 26/91 (28%), Gaps = 7/91 (7%)
Query: 7 LWHISRKECLCCFQHIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAVWNEVEGQ 66
+ + + I + Y+ G L +++ +KV
Sbjct: 261 VDPGDYRMIIPLESSILIYSVPVHGE-FAAYYQGAPEKGVLLKYDVKTRKV------TEV 313
Query: 67 TKLITAANFCENGKFAVVGSYDGRCIFYTTD 97
+T + K +V DG+ + +
Sbjct: 314 KNNLTDLRLSADRKTVMVRKDDGKIYTFPLE 344
Score = 34.8 bits (78), Expect = 0.015
Identities = 35/335 (10%), Positives = 71/335 (21%), Gaps = 41/335 (12%)
Query: 88 DGRCIFYTTDQLKYHTQIHVRSTRGKNAT----GRKISGIEPMPGEDKILVTSNDS--RI 141
DG I + + Q ++ G +I + + +
Sbjct: 14 DGDLIAFVSR-----GQAFIQDVSGTYVLKVPEPLRIRYVRRGGDTKVAFIHGTREGDFL 68
Query: 142 RLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIVSGSENQCIYIWKTHHDYAKFSSVR 201
+YD R + NV + + + + +T S
Sbjct: 69 GIYDYRTGKAEKFEENLGNVFAM-GVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSRE 127
Query: 202 RDRNDFWEGIKAHNAVVTCAVFAPCPELIIAQMEPDKSESTGYVLNATGRKIS--GIEPM 259
DF + + + + Q + AT
Sbjct: 128 AMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFD 187
Query: 260 PGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKAS-----FSHDGKYIVSGSE 314
+ S S D LN S + V I S +G
Sbjct: 188 ADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEY 247
Query: 315 NQCIYIWKTHHDYAKFSSVRRDRNDFWEGIKAHNAVVTCAVFAPCPELIIAQMEPDKSES 374
+ ++ R +++ + + V
Sbjct: 248 DLNDMYKRSSPINVDPGDYRM-----IIPLESSILIYSVPVHGEF--------------- 287
Query: 375 TGYVLVSADFNGVIRVF-LNKTKPKHSSLPVSALA 408
A GV+ + + K ++ L
Sbjct: 288 -AAYYQGAPEKGVLLKYDVKTRKVTEVKNNLTDLR 321
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 57.2 bits (136), Expect = 1e-09
Identities = 41/324 (12%), Positives = 91/324 (28%), Gaps = 7/324 (2%)
Query: 1 MDKTVRLWHISRKECLCCFQ-HIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAV 59
DK +R++ K+ L H V A+ + +SGS D +R+W+I
Sbjct: 31 DDKMIRVYDSINKKFLLQLSGHDGGVWALKYAH--GGILVSGSTDRTVRVWDIKKGCCTH 88
Query: 60 WNEVEGQTKLITAANFCENGKFAVVGSYDGRCIFYTTDQLKYHTQIHVRSTRGKNATGRK 119
E T +N K+ V GS D + + +
Sbjct: 89 VFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPE 148
Query: 120 ISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIVSG 179
+ + S + + V + H + +
Sbjct: 149 ENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTI 208
Query: 180 SENQCIYIWKTHHDYAKFSSVRRDRNDFWEGIKAHNAVVTCAVFAPCPELIIAQMEPDKS 239
+++ D + + V + A
Sbjct: 209 YDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGW 268
Query: 240 ESTGYVLNATGR--KISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQ 297
++ Y + +S I D ILV+ ++++ +Y+LR + + + + Q
Sbjct: 269 DANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLR--SGKLVHANILKDADQ 326
Query: 298 IKASFSHDGKYIVSGSENQCIYIW 321
I + + + ++ ++
Sbjct: 327 IWSVNFKGKTLVAAVEKDGQSFLE 350
Score = 49.5 bits (116), Expect = 3e-07
Identities = 39/347 (11%), Positives = 87/347 (25%), Gaps = 32/347 (9%)
Query: 21 HIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAVWNEVEGQTKLITAANFCENGK 80
H+ V C +D Y ++G+ D +R+++ +KK ++ G + A + G
Sbjct: 11 HMTSVIT-CLQF-EDNYVITGADDKMIRVYDSINKKFL--LQLSGHDGGVWALKYAHGGI 66
Query: 81 FAVVGSYDGRCIFYTTDQLKYHTQIHVRSTRGKNATGRKISGIEPMPGEDKILVTSNDSR 140
+ ++ H ST I I+ S D+
Sbjct: 67 LVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCL-------DIVEYKNIKYIVTGSRDNT 119
Query: 141 IRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIVSGSENQCIYIWKTHHDYAKFS-- 198
+ ++ L + + + + V + H +
Sbjct: 120 LHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSY 179
Query: 199 --SVRRDRNDFWEGIKAHNAVVTCAVFAPCPELIIAQMEPDKSESTGYVLNATGRKISGI 256
++ + + + + + G + +
Sbjct: 180 DNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTL 239
Query: 257 EPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIK-----ASFSHDGKYIVS 311
+ +L S+ + + S +F +VS
Sbjct: 240 QGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVS 299
Query: 312 GSENQCIYIWKTHHDYAKFSSVRRDRNDFWEGIKAHNAVVTCAVFAP 358
GSENQ I+ + V + I + F
Sbjct: 300 GSENQ-FNIY----NLRSGKLVHAN-------ILKDADQIWSVNFKG 334
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 56.7 bits (135), Expect = 2e-09
Identities = 35/322 (10%), Positives = 80/322 (24%), Gaps = 40/322 (12%)
Query: 34 DDRYFLSGSLDGKLRLWNIPDKKVAVWNEVEGQTKLITAANFCENGKFA-VVGSYDGRCI 92
Y + + L + ++ V + + TA + + A V+ ++ G
Sbjct: 7 GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAM-MAPDNRTAYVLNNHYGDIY 65
Query: 93 FYTTDQLKYHTQIHVRSTRGKNATGRKISGIEPMPGEDKILVTSNDS------------R 140
D K ++ S G+ GR + P ++ T N + R
Sbjct: 66 GIDLDTCKNTFHANLSSVPGE--VGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPR 123
Query: 141 IRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIVSGSENQCIYIWK----------- 189
+ ++ D + + + + DG V+G + + +
Sbjct: 124 LEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRN 183
Query: 190 -------THHDYAKFSSVRRDRNDFWEGIKAHNAVVTCAVFAPCPELIIAQMEPDKSEST 242
+ A ++ ++
Sbjct: 184 WNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTH 243
Query: 243 GYVLNATGRKISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKA-S 301
P D + +R+ YDL+ K N+ +
Sbjct: 244 TQEFADLTELYFTGLRSPK-DPNQIYGVLNRLAKYDLKQR----KLIKAANLDHTYYCVA 298
Query: 302 FSHDGKYIVSGSENQCIYIWKT 323
F G + G + ++
Sbjct: 299 FDKKGDKLYLGGTFNDLAVFNP 320
Score = 37.0 bits (84), Expect = 0.003
Identities = 6/74 (8%), Positives = 19/74 (25%), Gaps = 1/74 (1%)
Query: 2 DKTVRLWHISRKECLCCFQHIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAVWN 61
+ + + +++ + + F G L ++N +
Sbjct: 271 LNRLAKYDLKQRKLIKAANLDHTYYCVAFDK-KGDKLYLGGTFNDLAVFNPDTLEKVKNI 329
Query: 62 EVEGQTKLITAANF 75
++ G T
Sbjct: 330 KLPGGDMSTTTPQV 343
Score = 34.7 bits (78), Expect = 0.016
Identities = 8/106 (7%), Positives = 24/106 (22%), Gaps = 3/106 (2%)
Query: 2 DKTVRLWHISRKECLCCFQHIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAVWN 61
+ + + +L +++ +K+
Sbjct: 229 LYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAA 288
Query: 62 EVEGQTKLITAANFCENGKFAVVGSYDGRCIFYTTDQLKYHTQIHV 107
++ F + G +G + D L+ I +
Sbjct: 289 NLDHT---YYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKL 331
Score = 31.2 bits (69), Expect = 0.19
Identities = 9/169 (5%), Positives = 39/169 (23%), Gaps = 15/169 (8%)
Query: 168 SFSHDGKYIVSGSENQCIYIWKT------------HHDYAKFSSVRRDRNDFWEGIKAHN 215
+ +Y++ + +++ + + D + +
Sbjct: 3 ALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYG 62
Query: 216 AVVTCAVFAPCPELIIAQMEPDKSESTGY---VLNATGRKISGIEPMPGEDKILVTSNDS 272
+ + ++ G+++
Sbjct: 63 DIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPP 122
Query: 273 RIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIVSGSENQCIYIW 321
R+ ++ D + + + + DG V+G + + +
Sbjct: 123 RLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVK 171
Score = 27.0 bits (58), Expect = 5.1
Identities = 1/24 (4%), Positives = 9/24 (37%)
Query: 301 SFSHDGKYIVSGSENQCIYIWKTH 324
+ +Y++ + +++
Sbjct: 3 ALKAGHEYMIVTNYPNNLHVVDVA 26
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 55.6 bits (132), Expect = 3e-09
Identities = 32/311 (10%), Positives = 78/311 (25%), Gaps = 25/311 (8%)
Query: 36 RYFLSGSLDGKLRLWNIPDKKVAVWNEVEGQTKLITAANFCENGKFA-VVGSYDGRCIFY 94
Y L+ + KL + + V + G+ A + +
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKI 61
Query: 95 --TTDQLKYHTQIHVRSTRGKNATGRKISG----IEPMPGEDKILVTSNDSRIRLYDLRD 148
T + + R K+ G +S + ++ +T + + L D
Sbjct: 62 DLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYD 121
Query: 149 LNLSCKYKGYVNVSSQIKASFSHDGKYIVSGSENQCIYIWKTHHDYAKFSSVRRDRN--- 205
+ K + +++ DG + + + + +
Sbjct: 122 AETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYA 181
Query: 206 --DFWEGIKAHNAVVTCAVFAPCPELIIAQMEPDKSESTGYVLNATGRKISGIEPMPGED 263
D H + A I +P + ++ +++ E +
Sbjct: 182 QPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDV 241
Query: 264 ----------KILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIVSGS 313
K + + +DL + + S + S DG + G
Sbjct: 242 FYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVPLPHSYYS---VNVSTDGSTVWLGG 298
Query: 314 ENQCIYIWKTH 324
+ +
Sbjct: 299 ALGDLAAYDAE 309
Score = 44.8 bits (104), Expect = 9e-06
Identities = 27/309 (8%), Positives = 65/309 (21%), Gaps = 35/309 (11%)
Query: 2 DKTVRLWHISRKECLCCFQ---HIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVA 58
+ + + P + + + L ++ +
Sbjct: 10 PDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETL 69
Query: 59 VWNEVEG---QTKLITAANFCENGKFAVVGSYDG---RCIFYTTDQLKYHTQIHVRSTRG 112
++ + K + A +GK + F S R
Sbjct: 70 GRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRK 129
Query: 113 KNATGRKISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYV------------- 159
R+I+ + K+ D + + L + +
Sbjct: 130 AFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVW 189
Query: 160 ------NVSSQIKASFSHDGKYIVSGSENQCIYIWKTHHDYAKFSSVRRDRNDFWEGIKA 213
V + + D + + VR ++
Sbjct: 190 NQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYF----- 244
Query: 214 HNAVVTCAVFAPCPELIIAQMEPDKSESTGYVLNATGRKISGIEPMPGEDKILVTSNDSR 273
AV A ++ + +K+ S V + + +
Sbjct: 245 STAVNPAKTRAFGAYNVLESFDLEKNASIKRVP--LPHSYYSVNVSTDGSTVWLGGALGD 302
Query: 274 IRLYDLRDL 282
+ YD L
Sbjct: 303 LAAYDAETL 311
Score = 38.2 bits (87), Expect = 0.001
Identities = 4/57 (7%), Positives = 14/57 (24%), Gaps = 1/57 (1%)
Query: 1 MDKTVRLWHISRKECLCCFQHIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKV 57
+ + + + + ++ D G G L ++ +
Sbjct: 258 AYNVLESFDLEKNASIKRVPLPHSYYSVNVST-DGSTVWLGGALGDLAAYDAETLEK 313
Score = 27.1 bits (58), Expect = 3.7
Identities = 10/99 (10%), Positives = 22/99 (22%), Gaps = 4/99 (4%)
Query: 2 DKTVRLWHISRKECLCCFQHIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAVWN 61
+ + E I V + L +++
Sbjct: 218 RTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRA-FGAYNVLESFDLEKNASIKRV 276
Query: 62 EVEGQTKLITAANFCENGKFAVVGSYDGRCIFYTTDQLK 100
+ + N +G +G G Y + L+
Sbjct: 277 PLPHS---YYSVNVSTDGSTVWLGGALGDLAAYDAETLE 312
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 50.0 bits (118), Expect = 2e-07
Identities = 19/196 (9%), Positives = 40/196 (20%), Gaps = 37/196 (18%)
Query: 2 DKTVRLWHISRKECLCCFQHIDFVTAIC--FHPRDDRY---FLSGSLDGKLRLWNIPDKK 56
K + + + + F+ RY +L + G +R + K
Sbjct: 137 GKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGDYLFTTYGGNVRSADFSGDK 196
Query: 57 VAVWNEVEGQTKLITAANFCENGKFAVVGSYDGRCIFYTTDQLKYHTQIHVRSTRGKNAT 116
A T A + G + V +G + +
Sbjct: 197 PAFGKPWSLLTDAERAEGWRPGGMQQTAVQAKQNRYY-------------VLMHKGTDGS 243
Query: 117 GRKISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKY- 175
+ PG + + S D K
Sbjct: 244 HKD-------PGTQVWVYDLKSKQRVARWDLAQQKVEPLVS---------IQVSEDDKPL 287
Query: 176 -IVSGSENQCIYIWKT 190
+ + + +
Sbjct: 288 FYGLTATSDLV-VMDA 302
Score = 34.2 bits (77), Expect = 0.022
Identities = 21/256 (8%), Positives = 44/256 (17%), Gaps = 24/256 (9%)
Query: 169 FSHDGKYIVSGSENQCIYIWKTHHDYAKFSSVR-RDRNDFWEGIKAHNAVVTCAVFAPCP 227
+ D K V + T D + D H V
Sbjct: 24 IAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTLDHAGEIVIPAKHAQHVPSPYNTAFS 83
Query: 228 E--LIIAQMEPDKSESTGYVLNATGRKISGIEPMPGEDKILVTSNDSR-----------I 274
+ V + + +L +
Sbjct: 84 ADGKRLYVANIT---PAASVTVIDAVSKKMLSEIDTAACVLAYPAGDDRFTALCESGKAL 140
Query: 275 RLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKY---IVSGSENQCIYIWKTHHDYAKFS 331
+ + + + + +F + +Y + + + D F
Sbjct: 141 TVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGDYLFTTYGGNVRSADFSGDKPAFG 200
Query: 332 SVRRDRNDFWEGIKAHNAVVTCAVFAPCPELIIAQMEPDKSES----TGYVLVSADFNGV 387
D + M S V V +
Sbjct: 201 KPWSLLTDAERAEGWRPGGMQQTAVQAKQNRYYVLMHKGTDGSHKDPGTQVWVYDLKSKQ 260
Query: 388 IRVFLNKTKPKHSSLP 403
+ + K L
Sbjct: 261 RVARWDLAQQKVEPLV 276
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 47.5 bits (111), Expect = 1e-06
Identities = 46/316 (14%), Positives = 93/316 (29%), Gaps = 44/316 (13%)
Query: 17 CCFQHIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAVWNEVEGQTKLITAANFC 76
C + V + + DD+ +SG D +++W+ + + G T + +
Sbjct: 10 CRSETSKGVYCLQY---DDQKIVSGLRDNTIKIWDKNTLE--CKRILTGHTGSVLCLQY- 63
Query: 77 ENGKFAVVGSYDGRCIFYTTDQLKYHTQIHVRSTRGKNATGRKISGIEPMPGEDKILVTS 136
D R I + + + ++ S
Sbjct: 64 -----------DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCS 112
Query: 137 NDSRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIVSGSENQCIYIWKTHHDYAK 196
D I ++D+ + + D KYIVS S ++ I +W T
Sbjct: 113 KDRSIAVWDMASPTDITLRR-VLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTST---- 167
Query: 197 FSSVRRDRNDFWEGIKAHNAVVTCAVFAPCPELIIAQMEPDKS------ESTGYVLNATG 250
E ++ N + ++ D + E + G
Sbjct: 168 -----------CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEG 216
Query: 251 RKISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIK-----ASFSHD 305
+ +I+ + D +I+++DL G + + + ++ D
Sbjct: 217 HEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD 276
Query: 306 GKYIVSGSENQCIYIW 321
IVS S + I IW
Sbjct: 277 EFQIVSSSHDDTILIW 292
Score = 44.1 bits (102), Expect = 1e-05
Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 9/146 (6%)
Query: 1 MDKTVRLWHISRKECLCCFQHIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAVW 60
D+T+++W+ S E + I DR +SGS D +RLW+I
Sbjct: 156 GDRTIKVWNTSTCEFVRTLNGHKR--GIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV 213
Query: 61 NEVEGQTKLITAANFCENGKFAVVGSYDGRCIFY-TTDQLKYHTQIHVRSTRGKNATGRK 119
+ + K V G+YDG+ + L R +
Sbjct: 214 L----EGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGR 269
Query: 120 ISGIEPMPGEDKILVTSNDSRIRLYD 145
+ ++ +I+ +S+D I ++D
Sbjct: 270 VFRLQFDE--FQIVSSSHDDTILIWD 293
Score = 32.1 bits (71), Expect = 0.11
Identities = 25/192 (13%), Positives = 48/192 (25%), Gaps = 38/192 (19%)
Query: 168 SFSHDGKYIVSGSENQCIYIWKT----------------------HHDYAKFSSVRRDRN 205
+D + IVSG + I IW SS R
Sbjct: 20 CLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRV 79
Query: 206 DFWEGIKAHNAVVTCAVFAPCPELIIAQMEPDKSESTGYVLNATGRK------------I 253
+ N ++ M + + V +
Sbjct: 80 WDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 139
Query: 254 SGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIVSGS 313
+ + I+ S D I++++ G+ + + + +VSGS
Sbjct: 140 AVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC----LQYRDRLVVSGS 195
Query: 314 ENQCIYIWKTHH 325
+ I +W
Sbjct: 196 SDNTIRLWDIEC 207
Score = 31.7 bits (70), Expect = 0.14
Identities = 13/67 (19%), Positives = 20/67 (29%), Gaps = 12/67 (17%)
Query: 301 SFSHDGKYIVSGSENQCIYIWKTHHDYAKFSSVRRDRNDFWEGIKAHNAVVTCAVFAPCP 360
+D + IVSG + I IW D R + H V C +
Sbjct: 20 CLQYDDQKIVSGLRDNTIKIW----DKNTLECKRI--------LTGHTGSVLCLQYDERV 67
Query: 361 ELIIAQM 367
+ +
Sbjct: 68 IITGSSD 74
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 47.9 bits (113), Expect = 1e-06
Identities = 48/328 (14%), Positives = 89/328 (27%), Gaps = 21/328 (6%)
Query: 2 DKTVRLWHISRKECLCCFQHIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAVWN 61
+ L S E V RY DGK+ + ++ K+
Sbjct: 41 AGQIALIDGSTYEIKTVLDTGYAVHISRLSA-SGRYLFVIGRDGKVNMIDLWMKEPTTVA 99
Query: 62 EV---EGQTKLITAANFCENGKFAVVGSYDGR--CIFYTTDQLKYHTQIHVRSTRGKNAT 116
E+ + T+ K+A+ G+Y I Q T +
Sbjct: 100 EIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEY 159
Query: 117 G---RKISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDG 173
R + + + I+ +I L D DLN + K
Sbjct: 160 HPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLN-NLKTTEISAERFLHDGGLDGSH 218
Query: 174 KYIVSGSENQCIYIWKTHHDYAKFSSVRRDRNDFWEGIKAHNAVVTCAVFAPCPELIIAQ 233
+Y ++ + + + + + G A+ T +
Sbjct: 219 RYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDS 278
Query: 234 MEPDKSESTGYVLNATGRKISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVN 293
+ ++ G+ NA KI P G + + ++ + LY LN +
Sbjct: 279 VALIGTDPEGHPDNA--WKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAE------ 330
Query: 294 VSSQIKASFSHDGKYIVSGSENQCIYIW 321
S A F D K + +
Sbjct: 331 -ISGSVAVF--DIKAMTGDGSDPEFKTL 355
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 46.9 bits (109), Expect = 2e-06
Identities = 34/306 (11%), Positives = 79/306 (25%), Gaps = 36/306 (11%)
Query: 21 HIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAVWNEVEGQTKLITAANFCENGK 80
H +TA+ +P +SGS DG++ W+ + + LI + + + +
Sbjct: 12 HNKGITALTVNP-----LISGSYDGRIMEWSSSSMH-------QDHSNLIVSLDNSKAQE 59
Query: 81 FAVVGSYDGRCIFYTTDQLKYHTQIHVRSTRGKNATGRKISGIEPMPGEDKILVTSNDSR 140
++ + D + T + V +ND
Sbjct: 60 YSSISWDDTLKVNGITKHEFGSQPKVA-----------------SANNDGFTAVLTNDDD 102
Query: 141 IRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIVSGSENQCIYIW---KTHHDYAKF 197
+ + ++ + S+ + +
Sbjct: 103 LLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLR 162
Query: 198 SSVRRDRNDFWEGIKAHNAVVTCAVFAPCPELIIAQMEPDKSESTGYVLNATGRKISGIE 257
+ E A V+ + + S ++ + E
Sbjct: 163 AKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANE 222
Query: 258 PMPGEDKILVTSNDSRIRLYDLRD-LNLSCKYKGYVNVSSQIKASFSHDGKYIVSGSENQ 316
ED + S D+ I +Y ++ + + + + +VS +
Sbjct: 223 EEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAH---KDGVNNLLWETPSTLVSSGADA 279
Query: 317 CIYIWK 322
CI W
Sbjct: 280 CIKRWN 285
Score = 45.3 bits (105), Expect = 6e-06
Identities = 9/54 (16%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Query: 1 MDKTVRLWHISR-KECLCCFQ-HIDFVTAICFHPRDDRYFLSGSLDGKLRLWNI 52
+D + ++ + R + + H D V + + +S D ++ WN+
Sbjct: 235 LDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWET--PSTLVSSGADACIKRWNV 286
Score = 36.1 bits (81), Expect = 0.006
Identities = 7/88 (7%), Positives = 21/88 (23%), Gaps = 2/88 (2%)
Query: 8 WHISRKECLCCFQHIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAVWNEVEGQT 67
R + ++ +GSLD + ++++ + +
Sbjct: 200 RWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPM-KIIKALNAHK 258
Query: 68 KLITAANFCENGKFAVVGSYDGRCIFYT 95
+ + V D +
Sbjct: 259 DGVNNLLWETPSTL-VSSGADACIKRWN 285
Score = 35.7 bits (80), Expect = 0.008
Identities = 17/190 (8%), Positives = 48/190 (25%), Gaps = 4/190 (2%)
Query: 1 MDKTVRLWHISRKECLCCFQHIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAVW 60
D + + + + + +A+ L ++ + + +
Sbjct: 99 NDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLK 158
Query: 61 NEVEGQTKLITAANFCENGKFAVVGSYDGRCIFYTTDQLKYHTQIHVRSTRGKNATGRKI 120
+ + I+ + V + + + +
Sbjct: 159 TPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEK 218
Query: 121 SGIEPMPGEDKILVTSNDSRIRLYDLRD-LNLSCKYKGYVNVSSQIKASFSHDGKYIVSG 179
E ED + S D+ I +Y ++ + + + + +VS
Sbjct: 219 GANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAH---KDGVNNLLWETPSTLVSS 275
Query: 180 SENQCIYIWK 189
+ CI W
Sbjct: 276 GADACIKRWN 285
Score = 29.2 bits (63), Expect = 0.78
Identities = 24/278 (8%), Positives = 62/278 (22%), Gaps = 21/278 (7%)
Query: 1 MDKTVRLWHISRKECLCCFQHIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAVW 60
D + W S H + + ++ + + D
Sbjct: 29 YDGRIMEWSSSSMHQ----DHSNLIVSLDNSK-----------AQEYSSISWDDTLKVNG 73
Query: 61 NEVEGQTKLITAANFCENGKFAVVGSYDGRCIFYTTDQLKYHTQIHVRSTRGKNATGRKI 120
A+ +G AV+ + D I + + + + +
Sbjct: 74 ITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYV 133
Query: 121 SGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIVSGS 180
+ ++ S+ + + S
Sbjct: 134 AVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQS 193
Query: 181 ENQCIYIWKTHHDYAKFSSVRRDRNDFWEGIKAHNAVVTCAVFAPCPELIIAQMEPDKSE 240
W S + E + V T ++ + I +
Sbjct: 194 REVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSL-----DTNIFIYSVKRPM 248
Query: 241 STGYVLNATGRKISGIEPMPGEDKILVTSNDSRIRLYD 278
LNA ++ + ++ + D+ I+ ++
Sbjct: 249 KIIKALNAHKDGVNNLLWETP-STLVSSGADACIKRWN 285
Score = 28.8 bits (62), Expect = 1.1
Identities = 8/78 (10%), Positives = 22/78 (28%), Gaps = 11/78 (14%)
Query: 286 CKYKGYVNVSSQIKASFSHDGKYIVSGSENQCIYIWKTHHDYAKFSSVRRDRNDFWEGIK 345
+ + + + +GS + I+I+ + + +
Sbjct: 207 KINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSV-----------KRPMKIIKALN 255
Query: 346 AHNAVVTCAVFAPCPELI 363
AH V ++ L+
Sbjct: 256 AHKDGVNNLLWETPSTLV 273
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 44.2 bits (103), Expect = 2e-05
Identities = 20/214 (9%), Positives = 55/214 (25%), Gaps = 8/214 (3%)
Query: 2 DKTVRLWHISRKECLCCFQHIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAVWN 61
+ L K+ + V RY L D ++ + ++ K+
Sbjct: 41 AGQIALVDGDSKKIVKVIDTGYAVHISRMSA-SGRYLLVIGRDARIDMIDLWAKEPTKVA 99
Query: 62 EVE---GQTKLITAANFCENGKFAVVGSYDGRCIFYTTDQLKYHTQIHVRSTRGKN---- 114
E++ + ++ ++ + G+Y + QI +
Sbjct: 100 EIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTY 159
Query: 115 ATGRKISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGK 174
+++ I + +V ++ L + + +
Sbjct: 160 HPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHR 219
Query: 175 YIVSGSENQCIYIWKTHHDYAKFSSVRRDRNDFW 208
Y ++ + N D + V +
Sbjct: 220 YFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHP 253
Score = 33.0 bits (74), Expect = 0.061
Identities = 23/232 (9%), Positives = 54/232 (23%), Gaps = 26/232 (11%)
Query: 128 GEDKILVT-SNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKAS-FSHDGKYIVSGSENQCI 185
+ VT + +I L D S K ++ + S S G+Y++ + I
Sbjct: 30 LPNLFSVTLRDAGQIALVDGD----SKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARI 85
Query: 186 YIW----------------KTHHDYAKFSSVRRDRNDFWEGIKAHNAVVTCAVFAPCPEL 229
+ + G P+
Sbjct: 86 DMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQ 145
Query: 230 IIAQMEPDKSESTGYVLNATGRKISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYK 289
I++ T + +++ I + +V ++ L +
Sbjct: 146 IVSTRGMTVDTQTYHP----EPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVT 201
Query: 290 GYVNVSSQIKASFSHDGKYIVSGSENQCIYIWKTHHDYAKFSSVRRDRNDFW 341
+ +Y ++ + N D + V +
Sbjct: 202 SIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHP 253
Score = 31.8 bits (71), Expect = 0.14
Identities = 30/316 (9%), Positives = 80/316 (25%), Gaps = 33/316 (10%)
Query: 34 DDRYFLSGSLDGKLRLWNIPDKKVAVWNEVEGQTKLITAANFCENGKFAVVGSYDGRCIF 93
+ + ++ G++ L + KK + ++ + + +G++ +V D R
Sbjct: 31 PNLFSVTLRDAGQIALVDGDSKK--IVKVIDTG-YAVHISRMSASGRYLLVIGRDARIDM 87
Query: 94 YTTDQLKYHTQIHVRSTRGKNATGRKISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSC 153
+ ++ G A + S + I + + D L
Sbjct: 88 IDLWAKEPTKVAEIKI--GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQ 145
Query: 154 KY---------KGYVNVSSQIKASFSHDGKYIVSGSENQCIYIWKTHHDYAKFSSVRRDR 204
+ Y SH+ + + + + D +
Sbjct: 146 IVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGA 205
Query: 205 NDFWEGIKAHNAVVTCAVFAPCPE----------LIIAQMEPDKSESTGYVLNATGRKIS 254
F ++ A + A ++ K+ G N K
Sbjct: 206 APFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYG 265
Query: 255 GIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIV---- 310
+ ++ + + + + +G S IK ++
Sbjct: 266 PVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIK--THPKSSHLYVDTT 323
Query: 311 ---SGSENQCIYIWKT 323
+Q + ++
Sbjct: 324 FNPDARISQSVAVFDL 339
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 39.4 bits (90), Expect = 5e-04
Identities = 33/293 (11%), Positives = 75/293 (25%), Gaps = 15/293 (5%)
Query: 2 DKTVRLWHISRKECLCCFQHIDF---VTAICFHPRDDRYFLSGSLDGKLRLWNI-PDKKV 57
+ + +W+++ + L Q +D V + P ++ + ++ + I PD
Sbjct: 13 SQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGA 72
Query: 58 AVWNEVEGQTKLITAANFCENGKFAVVGSYDGRCIFYTTDQLKYHTQIHVRSTRGKNATG 117
+ +T + G+F VGSY+ + T + +
Sbjct: 73 LTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHS 132
Query: 118 RKISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIV 177
IS + D + V + F + +Y
Sbjct: 133 ANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAY 192
Query: 178 SGSENQCIYIWKTHHDYAKFSSVRRDRNDFWEGIKAHNAVVTCAVFAPCPE--------- 228
+E D + + E +
Sbjct: 193 CVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTAS 252
Query: 229 -LIIAQMEPDKSESTGYVLNATGRKISGIEPMPGEDKILVTSNDS-RIRLYDL 279
+ + + D S + T + G ++ S I +Y++
Sbjct: 253 LITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEI 305
Score = 27.1 bits (58), Expect = 4.6
Identities = 10/61 (16%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
Query: 268 TSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKA-SFSHDGKYI-VSGSENQCIYIWKTHH 325
+ +I +++L + + V+V Q++ S D +Y+ V + ++
Sbjct: 10 SPESQQIHVWNL-NHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAP 68
Query: 326 D 326
D
Sbjct: 69 D 69
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 35.6 bits (80), Expect = 0.007
Identities = 23/284 (8%), Positives = 68/284 (23%), Gaps = 17/284 (5%)
Query: 2 DKTVRLWHISRKECLCCFQHIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAVWN 61
+ + ++ + P + +++ + + + + V
Sbjct: 11 SDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATV 70
Query: 62 EVEGQTKLITAANFCENGKFAVVGSYDGRCIFYTTDQLKYHTQIHVRSTRGKNATGRKIS 121
+ + + + + S I T++ + + +
Sbjct: 71 PAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-----------KSPL 119
Query: 122 GIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIVSGSE 181
G+ P K+ VT+N + I + Y+ +
Sbjct: 120 GLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYV---AN 176
Query: 182 NQCIYIWKTHHDYAKFSSVRRDRNDFWEGIKAHNAVVTCAVFAPCPELIIAQMEPDKSES 241
+ I + ++ ++ ++
Sbjct: 177 FDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKI 236
Query: 242 TGYVLNATGRKISGIEPMPGEDKILVT-SNDSRIRLYDLRDLNL 284
T + G +GI P K+ V S + + + D +
Sbjct: 237 TARI--PVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTI 278
Score = 34.1 bits (76), Expect = 0.022
Identities = 5/57 (8%), Positives = 15/57 (26%)
Query: 1 MDKTVRLWHISRKECLCCFQHIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKV 57
TV + + I P + +++ S + + + +
Sbjct: 222 YFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTI 278
>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal
domain {Paracoccus denitrificans [TaxId: 266]}
Length = 459
Score = 34.0 bits (78), Expect = 0.029
Identities = 31/169 (18%), Positives = 58/169 (34%), Gaps = 16/169 (9%)
Query: 157 GYVNVSSQIKASFSHDGKYIVSGSENQCIYIW-KTHHDYAKFSSVRRDRNDFWEGIKAHN 215
G N S +I + + + I+ HH + F+ + D + KA+
Sbjct: 51 GQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEGKYDGRFLFMNDKANT 110
Query: 216 --AVVTCAVFAP--CPELIIAQ----MEPDKSESTGYVLNATGRKISGIEPMPGEDKILV 267
A V C V E+ A+ + P K + YV + P+ + +
Sbjct: 111 RVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDET----PLVNDGTNME 166
Query: 268 TSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIK-ASFSHDGKYIVSGSEN 315
+ ++ D + + V VS + ++GK+ S S N
Sbjct: 167 DVANYV-NVFTAVDAD-KWEVAWQVLVSGNLDNCDADYEGKWAFSTSYN 213
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 33.2 bits (74), Expect = 0.053
Identities = 23/286 (8%), Positives = 56/286 (19%), Gaps = 25/286 (8%)
Query: 136 SNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYI----------VSGSENQCI 185
+ ++ + D + + G ++ + DG +I G +
Sbjct: 25 AAVTQQFVIDGE----AGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYV 80
Query: 186 YIWKTHHDYAKFSSVRRDRNDFWEGIKAHN-AVVTCAVFAPCPELIIAQMEPDKSESTGY 244
++ D F G ++ + A
Sbjct: 81 EVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKA 140
Query: 245 VLNATGRKISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQI----KA 300
D + D + V
Sbjct: 141 FKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHP 200
Query: 301 SFSHDGKYIVSGSENQCIYIWKTHHDYAKFSSVRRDRNDFWEGIKAHNAVVTCAVFAPCP 360
++S +V + I+ AKF + +
Sbjct: 201 AYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRAL 260
Query: 361 ELIIAQMEPDKSESTGYVLVSADFNGVIRVFLNKTKPKHSSLPVSA 406
+ I ++ + + V KT + + +
Sbjct: 261 DRIYLLVDQ------RDEWRHKTASRFVVVLDAKTGERLAKFEMGH 300
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 31.8 bits (72), Expect = 0.17
Identities = 36/191 (18%), Positives = 60/191 (31%), Gaps = 45/191 (23%)
Query: 34 DDRY-FLSGSLDGKLRLWNIPD----KKVAVWN--------------EVEGQTKLITAAN 74
D+ Y F SG G++R+ +P ++ V+N E+ G + +
Sbjct: 9 DEYYGFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGD 68
Query: 75 FCENGKFAVVGSYDGRCIFYTTDQLKYHTQIHVRSTRG-------KNATGRKISGIEPMP 127
G YDG+ +F D K +T++ + I G+
Sbjct: 69 CHHPHISMTDGRYDGKYLF-IND--KANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQK 125
Query: 128 GEDKILVTSNDS-RIRL-YDLRDLNLSCKYKGYV-------NVSSQIK-------ASFSH 171
V N I D D +L Y + +V+ Q+ +
Sbjct: 126 VPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQVIVDGNLDNTDADY 185
Query: 172 DGKYIVSGSEN 182
GKY S N
Sbjct: 186 TGKYATSTCYN 196
Score = 27.6 bits (61), Expect = 2.8
Identities = 28/166 (16%), Positives = 49/166 (29%), Gaps = 28/166 (16%)
Query: 169 FSHDGKYIVSGSENQCIYIWKT---------HHDYAKFSSVRRDRNDFWEGIKAHN--AV 217
F+ D G N+ I HH + + R D + KA+ A
Sbjct: 40 FNVDSAT-GWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKANTRVAR 98
Query: 218 VTCAVFAPCPELI-------IAQMEPDKSESTGYVLNATGRKISGIEPMPGEDKILVTSN 270
+ + ++ I + K T YV I P P + N
Sbjct: 99 IRLDIMK-TDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVI----PQPNDGTDFSLDN 153
Query: 271 -DSRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIVSGSEN 315
+ D ++++ + N+ + + GKY S N
Sbjct: 154 SYTMFTAIDAETMDVAWQVIVDGNLDN---TDADYTGKYATSTCYN 196
>d2ebsa1 b.69.13.1 (A:4-430) Oligoxyloglucan reducing end-specific
cellobiohydrolase {Yeast (Geotrichum sp. M128) [TaxId:
203496]}
Length = 427
Score = 31.3 bits (69), Expect = 0.21
Identities = 45/339 (13%), Positives = 86/339 (25%), Gaps = 33/339 (9%)
Query: 24 FVTAICFHPRDDRYFLSGSLDGKLRL-------WNIPDKKVAVWNEVEGQTKLITAANFC 76
++T I HP+ + + G W + + + T+ I
Sbjct: 13 YITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNN 72
Query: 77 ENGKFAVVGSYDGRC---IFYTTDQLKYHTQIHVRSTRGKNATGRKISGIEPMPGEDKIL 133
+ + G Y G + + D+ + T G N GR ++
Sbjct: 73 PDRLYLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGE--------RLA 124
Query: 134 VTSNDSRIRLYDLRDLNLSCKYKG---YVNVSSQIKASFSHDGKYIVSGSENQCIYIWKT 190
V +S R + + NV+S A + G V +
Sbjct: 125 VNPFNSNEVWMGTRTEGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPER-NGTIYA 183
Query: 191 HHDYAKFSSVRRDRNDFWEGIKAH--NAVVTCAVFAPCPELIIAQMEPDKSESTGYVLNA 248
+ V D WE + + + P + +P K T L
Sbjct: 184 SATAPQGMYVTHDGGVSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFLYV 243
Query: 249 TGRKISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKY 308
T G P + N + D+ + Y N +
Sbjct: 244 TYADYPG--PWGVTFGEVWRQNRTSGAWDDITPRVGNSSPAPYNNQT----FPAGGFCGL 297
Query: 309 IVSGSENQCIYIW---KTHHDYAKFSSVRRDRNDFWEGI 344
V + + + + + D W+ +
Sbjct: 298 SVDATNPNRLVVITLDRDPGPALDSIYLSTDAGATWKDV 336
>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase
{Acinetobacter calcoaceticus [TaxId: 471]}
Length = 450
Score = 28.8 bits (63), Expect = 1.1
Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 11/74 (14%)
Query: 26 TAICFHPRDDRYFLSGSLDGKLRLWNIPDKKV-------AVWNEVEGQTKLITAA---NF 75
A+ + P D++ +L+ GK+ N V + N+ +GQ L+ A +F
Sbjct: 30 HALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDF 88
Query: 76 CENGKFAVVGSYDG 89
N + G++
Sbjct: 89 KNNPYIYISGTFKN 102
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain
{Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Length = 281
Score = 28.2 bits (61), Expect = 1.9
Identities = 27/176 (15%), Positives = 47/176 (26%), Gaps = 1/176 (0%)
Query: 167 ASFSHDGKYIVSGSENQCIYIWKTHHDYAKFSSVRRDRNDFWEGIKAHNAVVTCAVFAPC 226
A F DG+ I + Y + + F A F P
Sbjct: 46 ARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPD 105
Query: 227 PELIIAQMEPDKSESTGYVLNATGRKISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSC 286
LII+ S + I+ + G ++ ++ R+ + +L
Sbjct: 106 GNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWK 165
Query: 287 KYKGYVNVSSQIKASFSHDGKYIVSGSENQCIYIWKTHHDYAKFSSVRRDRNDFWE 342
Y+G S K IV S + + H Y + +
Sbjct: 166 GYRGG-TRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTD 220
Score = 27.0 bits (58), Expect = 4.5
Identities = 21/170 (12%), Positives = 47/170 (27%), Gaps = 2/170 (1%)
Query: 19 FQHIDFVTAICFHPRDDRYFLSGSLDGKLRLWNIPDKKVAVWNEVEGQTKLITAANFCEN 78
F F P + + ++ + + + N V T F +
Sbjct: 91 TGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADG 150
Query: 79 GKFAVVGSYDGRCIFYTTDQLKYHTQIHVRSTRGKNATGRKISGIEPMPGEDKILVTSND 138
+ +++ + I V S K P+ +I ++
Sbjct: 151 RRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHRIYFITDI 210
Query: 139 SRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIVSGSENQCIYIW 188
DL+ + + + + + DG+ I+ IYI+
Sbjct: 211 DGFGQIYSTDLD-GKDLRKHTSFTDYYPRHLNTDGRRILFSKGGS-IYIF 258
>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein
6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 465
Score = 27.6 bits (60), Expect = 3.1
Identities = 21/155 (13%), Positives = 36/155 (23%), Gaps = 40/155 (25%)
Query: 34 DDRYFLSGSLDGKLRLWNIPDKKVAVWNEVEGQTKLITAANFCENGKFAVVGSYDGRCIF 93
D F+ G +RLWN+ T LI S D
Sbjct: 26 SDTEFIYREQKGTVRLWNVETNT---------STVLIEGKKIESLRAIRYEISPDREYAL 76
Query: 94 YTTDQLKYHTQIHVRSTRGKNATGRKISGIEPMPGEDKILVTSNDSRIRLYDLRDLNLSC 153
++ + + I S L + +
Sbjct: 77 FSYN-------------------------------VEPIYQHSYTGYYVLSKIPHGDPQS 105
Query: 154 KYKGYVNVSSQIKASFSHDGKYIVSGSENQCIYIW 188
V+ + A + G+ ++ EN Y
Sbjct: 106 LDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCA 140
Score = 26.1 bits (56), Expect = 8.7
Identities = 9/59 (15%), Positives = 18/59 (30%)
Query: 263 DKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIVSGSENQCIYIW 321
+ I S L + + V+ + A + G+ ++ EN Y
Sbjct: 82 EPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCA 140
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.135 0.421
Gapped
Lambda K H
0.267 0.0373 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,553,099
Number of extensions: 72189
Number of successful extensions: 585
Number of sequences better than 10.0: 1
Number of HSP's gapped: 347
Number of HSP's successfully gapped: 131
Length of query: 408
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 321
Effective length of database: 1,213,086
Effective search space: 389400606
Effective search space used: 389400606
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.5 bits)