RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy9882
(81 letters)
>1yq1_A Glutathione S-transferase; nematoda, structural genomics, PSI,
protein structure initiative; 3.00A {Caenorhabditis
elegans}
Length = 208
Score = 76.6 bits (189), Expect = 3e-19
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 7 YPFGKVPCIEINGVQYHQSRAIGRYLARQAGLYGMDGPEMDMKIDMIVDTIDDMRQ 62
P ++P + I+G + QS AI RYLAR+ G G PE + +D + D D
Sbjct: 47 TPMKQLPVLNIDGFELPQSGAILRYLARKFGFAGKT-PEEEAWVDAVHDLFKDFLA 101
>1b48_A GST, mgsta4-4, protein (glutathione S-transferase); subunit
cooperativity; HET: HAG GSH; 2.60A {Mus musculus} SCOP:
a.45.1.1 c.47.1.5 PDB: 1guk_A
Length = 221
Score = 75.2 bits (185), Expect = 9e-19
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 7 YPFGKVPCIEINGVQYHQSRAIGRYLARQAGLYGMDGPEMDMKIDMIVDTIDDMRQG 63
FG+VP +EI+G+ Q+RAI YLA + LYG D + ++IDM D D+
Sbjct: 49 LLFGQVPLVEIDGMMLTQTRAILSYLAAKYNLYGKD-LKERVRIDMYADGTQDLMMM 104
>2hnl_A Glutathione S-transferase 1; prostaglandin synthase, river BLI
onchocerca volvulus, immune modulation; HET: GSH; 2.00A
{Onchocerca volvulus}
Length = 225
Score = 75.1 bits (185), Expect = 1e-18
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 7 YPFGKVPCIEINGVQYHQSRAIGRYLARQAGLYGMDGPEMDMKIDMIVDTIDDMRQ 62
PFG VP + ++G +S AI L + GL G + + KI +V ID++ Q
Sbjct: 70 TPFGHVPMLNVSGNVLGESHAIELLLGGRFGLLGTN-DWEEAKIMAVVLNIDELFQ 124
>1vf1_A Glutathione S-transferase 3; detoxification; HET: GSH; 1.77A
{Gallus gallus} PDB: 1vf2_A* 1vf3_A* 1vf4_A
Length = 229
Score = 74.8 bits (184), Expect = 2e-18
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 7 YPFGKVPCIEINGVQYHQSRAIGRYLARQAGLYGMDGPEMDMKIDMIVDTIDDMRQ 62
F +VP +EI+G++ Q+RAI Y+A + LYG D + IDM V DD+
Sbjct: 50 LMFQQVPMVEIDGMKLVQTRAILNYIAGKYNLYGKD-LKERALIDMYVGGTDDLMG 104
>1tw9_A Glutathione S-transferase 2; 1.71A {Heligmosomoides polygyrus}
SCOP: a.45.1.1 c.47.1.5
Length = 206
Score = 74.0 bits (182), Expect = 2e-18
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 5 NHYPFGKVPCIEINGVQYHQSRAIGRYLARQAGLYGMDGPEMDMKIDMIVDTIDDMRQ 62
+PFG+VP +E++G Q QS+AI RYLA+ G G P ID + D D R
Sbjct: 44 ATFPFGQVPVLEVDGQQLAQSQAICRYLAKTFGFAGAT-PFESALIDSLADAYTDYRA 100
>2ws2_A NU-class GST, glutathione S-transferase; parasite, nematode; 2.01A
{Haemonchus contortus}
Length = 204
Score = 73.9 bits (182), Expect = 3e-18
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 7 YPFGKVPCIEINGVQYHQSRAIGRYLARQAGLYGMDGPEMDMKIDMIVDTIDDMRQ 62
PFG++P +E++G Q QS AI RYLAR+ G G + +D I D D
Sbjct: 46 MPFGQLPVLEVDGKQLPQSVAIVRYLARKFGYAGKS-AWEEAVVDSIADQFKDFLN 100
>2cvd_A Glutathione-requiring prostaglandin D synthase;
glutathione-S-transferase, isomerase; HET: GSH HQL;
1.45A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB:
1iyi_A* 1v40_A* 1iyh_A* 3vi5_A* 3vi7_A* 2vcq_A* 2vcw_A*
2vcx_A* 2vcz_A* 2vd0_A* 2vd1_A* 3kxo_A* 3ee2_A* 1pd2_1*
Length = 198
Score = 73.5 bits (181), Expect = 3e-18
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 7 YPFGKVPCIEINGVQYHQSRAIGRYLARQAGLYGMDGPEMDMKIDMIVDTIDDMRQ 62
PFGK+P +E++G+ HQS AI RYL + L G +D IVDT+DD
Sbjct: 45 LPFGKIPILEVDGLTLHQSLAIARYLTKNTDLAGNT-EMEQCHVDAIVDTLDDFMS 99
>2on7_A Nagst-1, Na glutathione S-transferase 1; hookworm; 2.40A {Necator
americanus}
Length = 206
Score = 73.5 bits (181), Expect = 3e-18
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 7 YPFGKVPCIEINGVQYHQSRAIGRYLARQAGLYGMDGPEMDMKIDMIVDTIDDMRQ 62
PFG+VP +E++G Q QS AI RYLARQ G G + +D + D D R
Sbjct: 46 LPFGQVPVLEVDGKQLAQSLAICRYLARQFGFAGKS-TFDEAVVDSLADQYSDYRV 100
>1zl9_A GST class-sigma, glutathione S-transferase 5; glutathione
transferase, C.elegans; HET: GSH; 2.01A {Caenorhabditis
elegans}
Length = 207
Score = 73.5 bits (181), Expect = 4e-18
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 7 YPFGKVPCIEINGVQYHQSRAIGRYLARQAGLYGMDGPEMDMKIDMIVDTIDDMRQ 62
PFG++P +E++G + QS AI R+LAR+ L G + +++ + D D
Sbjct: 48 APFGQLPFLEVDGKKLAQSHAIARFLAREFKLNGKT-AWEEAQVNSLADQYKDYSS 102
>1m0u_A GST2 gene product; flight muscle protein, sigma, transferase; HET:
GSH; 1.75A {Drosophila melanogaster} SCOP: a.45.1.1
c.47.1.5
Length = 249
Score = 74.0 bits (182), Expect = 5e-18
Identities = 24/56 (42%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 7 YPFGKVPCIEINGVQYHQSRAIGRYLARQAGLYGMDGPEMDMKIDMIVDTIDDMRQ 62
P G++P +E++G + HQS ++ R+LA+ GL G P D++ID++VDTI+D R
Sbjct: 92 MPMGQMPVLEVDGKRVHQSISMARFLAKTVGLCGAT-PWEDLQIDIVVDTINDFRL 146
>2on5_A Nagst-2, Na glutathione S-transferase 2; hookworm; HET: GSH; 1.90A
{Necator americanus}
Length = 206
Score = 72.8 bits (179), Expect = 7e-18
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 7 YPFGKVPCIEINGVQYHQSRAIGRYLARQAGLYGMDGPEMDMKIDMIVDTIDDMRQG 63
PFG++P +E +G Q QS AI RYL+R+ G G P + +D + D D
Sbjct: 46 MPFGQIPVLEEDGKQLAQSFAIARYLSRKFGFAGKT-PFEEALVDSVADQYKDYINE 101
>2gsq_A Squid GST, glutathione S-transferase; squid digestive gland,
sigma class; HET: GBI; 2.20A {Ommastrephes sloani}
SCOP: a.45.1.1 c.47.1.5 PDB: 1gsq_A*
Length = 202
Score = 72.8 bits (179), Expect = 7e-18
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 7 YPFGKVPCIEINGVQYHQSRAIGRYLARQAGLYGMDGPEMDMKIDMIVDTIDDMRQ 62
+P ++I+G + QS I R+LAR+ GL G ++D I +T+ D+
Sbjct: 45 MYSNAMPVLDIDGTKMSQSMCIARHLAREFGLDGKT-SLEKYRVDEITETLQDIFN 99
>1dug_A Chimera of glutathione S-transferase-synthetic linker-C-terminal
fibrinogen gamma...; gamma chain integrin fragment; HET:
GSH; 1.80A {Schistosoma japonicum} SCOP: a.45.1.1
c.47.1.5 PDB: 1gne_A* 3qmz_T 1y6e_A 1m9a_A* 1gtb_A*
1gta_A* 1m99_A* 1m9b_A* 1ua5_A* 1u87_A* 1u88_A* 3crt_A*
3cru_A* 3d0z_A*
Length = 234
Score = 72.9 bits (179), Expect = 9e-18
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 7 YPFGKVPCIEINGVQYHQSRAIGRYLARQAGLYGMDGPEMDMKIDMIVDTIDDMRQ 62
F +P V+ QS AI RY+A + + G P+ +I M+ + D+R
Sbjct: 49 LEFPNLPYYIDGDVKLTQSMAIIRYIADKHNMLGGC-PKERAEISMLEGAVLDIRY 103
>2a2r_A Glutathione S-transferase P; detoxification, nitric oxide carrier,
S- nitrosoglutathione; HET: MES GSN; 1.40A {Homo
sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 11gs_A* 12gs_A*
14gs_A* 16gs_A* 18gs_A* 21gs_A* 13gs_A* 2a2s_A* 3dd3_A*
3dgq_A* 3n9j_A* 3pgt_A* 1pgt_A* 2pgt_A* 4pgt_A* 22gs_A*
17gs_A* 3gus_A* 10gs_A* 1aqv_A* ...
Length = 210
Score = 72.4 bits (178), Expect = 9e-18
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 7 YPFGKVPCIEINGVQYHQSRAIGRYLARQAGLYGMDGPEMDMKIDMIVDTIDDMRQ 62
+G++P + + +QS I R+L R GLYG D + +DM+ D ++D+R
Sbjct: 48 CLYGQLPKFQDGDLTLYQSNTILRHLGRTLGLYGKD-QQEAALVDMVNDGVEDLRC 102
>1bg5_A MAB, fusion protein of alpha-Na,K-ATPase with glutathione
S-transferase; ankyrin binding, carrier crystallization,
ION transport; 2.60A {Rattus norvegicus} SCOP: a.45.1.1
c.47.1.5
Length = 254
Score = 73.3 bits (180), Expect = 1e-17
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 7 YPFGKVPCIEINGVQYHQSRAIGRYLARQAGLYGMDGPEMDMKIDMIVDTIDDMRQ 62
F +P V+ QS AI RY+A + + G P+ +I M+ + D+R
Sbjct: 50 LEFPNLPYYIDGDVKLTQSMAIIRYIADKHNMLGGC-PKERAEISMLEGAVLDIRY 104
>1okt_A Glutathione S-transferase; GST; 1.9A {Plasmodium falciparum} SCOP:
a.45.1.1 c.47.1.5 PDB: 1pa3_A 1q4j_A* 3fr9_A* 3frc_A*
2aaw_A* 3fr6_A 3fr3_A*
Length = 211
Score = 72.1 bits (177), Expect = 1e-17
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 7 YPFGKVPCIEINGVQYHQSRAIGRYLARQAGLYGMDGPEMDMKIDMIVDTIDDMR 61
PF +VP ++I + QS+AI RYL+++ + G + DMI + D+
Sbjct: 54 TPFEQVPILQIGDLILAQSQAIVRYLSKKYNICGES-ELNEFYADMIFCGVQDIH 107
>1b8x_A Protein (AML-1B); nuclear matrix targeting signal protein, signal
protein; 2.70A {Escherichia coli} SCOP: a.45.1.1
c.47.1.5
Length = 280
Score = 72.7 bits (178), Expect = 2e-17
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 YPFGKVPCIEINGVQYHQSRAIGRYLARQAGLYGMDGPEMDMKIDMIVDTIDDMRQG 63
F +P V+ QS AI RY+A + + G P+ +I M+ + D+R G
Sbjct: 49 LEFPNLPYYIDGDVKLTQSMAIIRYIADKHNMLGGC-PKERAEISMLEGAVLDIRYG 104
>1k3y_A GSTA1-1, glutathione S-transferase A1; S-hexyl glutatione, water
structu transferase; HET: GTX; 1.30A {Homo sapiens}
SCOP: a.45.1.1 c.47.1.5 PDB: 1gsf_A* 1guh_A* 1gsd_A*
1k3o_A 1k3l_A* 1pl1_A* 1pkz_A 1pkw_A* 2r6k_A* 1gse_A*
3u6v_A 1usb_A* 1ydk_A* 3q74_A 3ktl_A* 1pl2_A* 2r3x_A*
1xwg_A 3l0h_A* 1ags_A* ...
Length = 221
Score = 71.8 bits (176), Expect = 2e-17
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 8 PFGKVPCIEINGVQYHQSRAIGRYLARQAGLYGMDGPEMDMKIDMIVDTIDDMRQ 62
F +VP +EI+G++ Q+RAI Y+A + LYG D + IDM ++ I D+ +
Sbjct: 50 MFQQVPMVEIDGMKLVQTRAILNYIASKYNLYGKD-IKERALIDMYIEGIADLGE 103
>3ik7_A Glutathione S-transferase A4; human GST A4-4, enzyme, cytoplasm,
polymorphism; HET: BOB; 1.97A {Homo sapiens} PDB: 1gum_A
1gul_A*
Length = 222
Score = 71.4 bits (175), Expect = 3e-17
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 7 YPFGKVPCIEINGVQYHQSRAIGRYLARQAGLYGMDGPEMDMKIDMIVDTIDDMRQG 63
F +VP +EI+G++ Q+R+I Y+A + L+G + + IDM V+ D+ +
Sbjct: 50 LLFQQVPMVEIDGMKLVQTRSILHYIADKHNLFGKN-LKERTLIDMYVEGTLDLLEL 105
>2fhe_A GST, glutathione S-transferase; transferase-substrate complex; HET:
GSH; 2.30A {Fasciola hepatica} SCOP: a.45.1.1 c.47.1.5
PDB: 2wrt_A 1fhe_A*
Length = 216
Score = 70.2 bits (172), Expect = 8e-17
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 7 YPFGKVPCIEINGVQYHQSRAIGRYLARQAGLYGMDGPEMDMKIDMIVDTIDDMRQ 62
+P + + QS AI RY+A + G+ G E ++ MI D+RQ
Sbjct: 49 LDLPNLPYYIDDKCKLTQSLAILRYIADKHGMIGTT-SEERARVSMIEGAAVDLRQ 103
>1tu7_A Glutathione S-transferase 2; HET: GSH; 1.50A {Onchocerca
volvulus} SCOP: a.45.1.1 c.47.1.5 PDB: 1tu8_A*
Length = 208
Score = 69.7 bits (171), Expect = 1e-16
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 7 YPFGKVPCIEINGVQYHQSRAIGRYLARQAGLYGMDGPEMDMKIDMIVDTIDDMRQ 62
+ FG++PC+ Q QS AI R+LAR+ L G + IDM + + D+
Sbjct: 45 FQFGQLPCLYDGDQQIVQSGAILRHLARKYNLNGEN-EMETTYIDMFCEGVRDLHV 99
>1gsu_A GST, CGSTM1-1, class-MU glutathione S-transferase; detoxification
enzyme, S-hexyl glutathione; HET: GTX; 1.94A {Gallus
gallus} SCOP: a.45.1.1 c.47.1.5 PDB: 1c72_A*
Length = 219
Score = 69.5 bits (170), Expect = 2e-16
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 5 NHYPFGKVPCIEINGVQYHQSRAIGRYLARQAGLYGMDGPEMDMKIDMIVDTIDDMRQ 62
F +P + V+ QS AI RY+AR+ + G ++D++ + + D+R
Sbjct: 52 LGLDFPNLPYLIDGDVKLTQSNAILRYIARKHNMCGET-EVEKQRVDVLENHLMDLRM 108
>3gtu_B Glutathione S-transferase; conjugation, detoxification, cytosolic,
heterodimer; 2.80A {Homo sapiens} SCOP: a.45.1.1
c.47.1.5
Length = 224
Score = 68.7 bits (168), Expect = 3e-16
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 7 YPFGKVPCIEINGVQYHQSRAIGRYLARQAGLYGMDGPEMDMKIDMIVDTIDDMRQ 62
F +P + + QS AI RY+AR+ + G E +++D+I + + D R
Sbjct: 58 LDFPNLPYLLDGKNKITQSNAILRYIARKHNMCGET-EEEKIRVDIIENQVMDFRT 112
>3h1n_A Probable glutathione S-transferase; APC84167, bordetella
bronchisepti structural genomics, PSI-2, protein
structure initiative; 1.83A {Bordetella bronchiseptica
RB50}
Length = 252
Score = 69.1 bits (169), Expect = 4e-16
Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Query: 6 HYPFGKVPCIEINGVQYHQSRAIGRYLARQAGLYGMDGPEMDMKIDMIVDTIDDMRQ 62
P P + +G+ Q+ I +L + GL D + ++ + TI D+
Sbjct: 68 DTPPFAPPYLVADGMTIAQTANILLFLGVEHGLAPPD-RAGRLWVNQLQLTIADLTA 123
>3iso_A Putative glutathione transferase; GST; HET: GSH; 1.90A {Clonorchis
sinensis}
Length = 218
Score = 67.9 bits (166), Expect = 7e-16
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Query: 7 YPFGKVPCIEINGVQYHQSRAIGRYLARQAGLYGMDGPEMDMKIDMIVDTIDDMRQ 62
+P + QS AI RY+A + + G P KI MI + D+R
Sbjct: 50 LELPNLPYYKDGNFSLTQSLAILRYIADKHNMIGNT-PVERAKISMIEGGLVDLRA 104
>2c4j_A Glutathione S-transferase MU 2; glutathione transferase, multigene
family; HET: GSO; 1.35A {Homo sapiens} SCOP: a.45.1.1
c.47.1.5 PDB: 1xw5_A* 1ykc_A* 2ab6_A* 2gtu_A 3gtu_A
3gur_A* 1hna_A* 1hnb_A* 1hnc_A* 1xw6_A* 1xwk_A* 1yj6_A*
2f3m_A* 2dc5_A 1gtu_A 4gtu_A 6gsu_A* 6gsv_A* 6gsw_A*
2gst_A* ...
Length = 218
Score = 67.9 bits (166), Expect = 7e-16
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 7 YPFGKVPCIEINGVQYHQSRAIGRYLARQAGLYGMDGPEMDMKIDMIVDTIDDMR 61
F +P + + QS AI RY+AR+ L G + ++ D++ + D R
Sbjct: 55 LDFPNLPYLIDGTHKITQSNAILRYIARKHNLCGES-EKEQIREDILENQFMDSR 108
>2wb9_A Glutathione transferase sigma class; thioredoxin fold; HET: GSH;
1.59A {Fasciola hepatica} PDB: 2wdu_A*
Length = 211
Score = 66.6 bits (163), Expect = 2e-15
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 7 YPFGKVPCIEINGV-----QYHQSRAIGRYLARQAGLYGMDGPEMDMKIDMIVDTIDDMR 61
P G+VP +++ G +Y +S AI R LARQ + G E I+ I+ +D+
Sbjct: 48 LPGGRVPLLDVTGPDGKLRRYQESMAIARLLARQFKMMGET-DEEYYLIERIIGECEDLY 106
Query: 62 Q 62
+
Sbjct: 107 R 107
>1oe8_A Glutathione S-transferase; schistosomiasis, detoxifying enzyme,
prostaglandin D2 synthase, vaccine candidate; HET: GSH;
1.65A {Schistosoma haematobium} SCOP: a.45.1.1 c.47.1.5
PDB: 1oe7_A* 2c80_A* 2ca8_A* 2f8f_A* 2c8u_A 2caq_A*
2cai_A* 1u3i_A*
Length = 211
Score = 65.9 bits (161), Expect = 3e-15
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Query: 7 YPFGKVPCIEINGVQYH-----QSRAIGRYLARQAGLYGMDGPEMDMKIDMIVDTIDDMR 61
P G++P ++I H +S AI RY+A++ + G E ++ ++ +D+
Sbjct: 48 IPGGRLPAVKITDNHGHVKWMVESLAIARYMAKKHHMMGGT-EEEYYNVEKLIGQAEDLE 106
>2fno_A AGR_PAT_752P; thioredoxin fold, GST C-terminal domain-like fold,
structura genomics, joint center for structural
genomics, JCSG; 2.00A {Agrobacterium tumefaciens} SCOP:
a.45.1.1 c.47.1.5
Length = 248
Score = 52.6 bits (126), Expect = 4e-10
Identities = 9/56 (16%), Positives = 16/56 (28%), Gaps = 2/56 (3%)
Query: 7 YPFGKVPCIEIN--GVQYHQSRAIGRYLARQAGLYGMDGPEMDMKIDMIVDTIDDM 60
F P + Q AI YL + + + ++ D D +
Sbjct: 66 VAFMGPPVLIDRERNFAISQMPAIAIYLGERLDILPATVEGRTLSAKIVNDANDVL 121
>2uz8_A Eukaryotic translation elongation factor 1 epsilon-1; protein
biosynthesis, aminoacyl-tRNA synthetase, GST, nuclear
protein, RNA-binding protein; HET: MSE; 2.0A {Homo
sapiens}
Length = 174
Score = 46.3 bits (110), Expect = 6e-08
Identities = 10/52 (19%), Positives = 19/52 (36%), Gaps = 5/52 (9%)
Query: 8 PFGKVPCIEI-NGVQYHQSRAIGRYLARQAG---LYGMDGPEMDMKIDMIVD 55
++P ++ NG I +L +QA L G E + ++
Sbjct: 26 GERQIPVLQTNNGPSLMGLTTIAAHLVKQANKEYLLGST-AEEKAMVQQWLE 76
>1gnw_A Glutathione S-transferase; herbicide detoxification; HET: GTX;
2.20A {Arabidopsis thaliana} SCOP: a.45.1.1 c.47.1.5
PDB: 1bx9_A*
Length = 211
Score = 44.5 bits (106), Expect = 3e-07
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 8 PFGKVPCIEINGVQYHQSRAIGRYLARQAGLYGMDGPE 45
PFG+VP E ++ +SRAI +Y+A + Y G
Sbjct: 50 PFGQVPAFEDGDLKLFESRAITQYIAHR---YENQGTN 84
>1ljr_A HGST T2-2, glutathione S-transferase; HET: GSH; 3.20A {Homo
sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 2ljr_A 3ljr_A*
Length = 244
Score = 44.7 bits (106), Expect = 3e-07
Identities = 10/39 (25%), Positives = 16/39 (41%), Gaps = 4/39 (10%)
Query: 8 PFGKVPCIEINGVQYHQSRAIGRYLARQAG----LYGMD 42
GK+P ++ +S AI YL+ + Y D
Sbjct: 50 SLGKLPTLKDGDFILTESSAILIYLSCKYQTPDHWYPSD 88
>1aw9_A Glutathione S-transferase III; herbicide detoxification; 2.20A
{Zea mays} SCOP: a.45.1.1 c.47.1.5
Length = 216
Score = 43.8 bits (104), Expect = 6e-07
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 8 PFGKVPCIEINGVQYHQSRAIGRYLARQAGLYGMDGP 44
PFG++P + +SRAI RY+A + Y +G
Sbjct: 50 PFGQIPALVDGDEVLFESRAINRYIASK---YASEGT 83
>2c3n_A Glutathione S-transferase theta 1; glutathione transferase,
polymorphism; 1.5A {Homo sapiens} PDB: 2c3q_A* 2c3t_A
Length = 247
Score = 43.5 bits (103), Expect = 9e-07
Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 5/49 (10%)
Query: 8 PFGKVPCIEINGVQYHQSRAIGRYLARQAG----LYGMDGPEMDMKIDM 52
P KVP ++ +S AI YL R+ Y D + ++D
Sbjct: 57 PLKKVPALKDGDFTLTESVAILLYLTRKYKVPDYWYPQD-LQARARVDE 104
>1axd_A Glutathione S-transferase I; transferase, herbicide
detoxification, transferase-transfera inhibitor
complex; HET: GGL CYW; 2.50A {Zea mays} SCOP: a.45.1.1
c.47.1.5 PDB: 1bye_A*
Length = 209
Score = 42.2 bits (100), Expect = 2e-06
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 8 PFGKVPCIEINGVQYHQSRAIGRYLARQAG---LYGMD 42
PFG+VP ++ + +SRAI +Y AR+ L +
Sbjct: 50 PFGQVPALQDGDLYLFESRAICKYAARKNKPELLREGN 87
>3lsz_A Glutathione S-transferase; xenobiotic, biodegradative metabolism,
PSI2, NYSGXRC, structural genomics, protein structure
initiative; HET: GSH; 1.70A {Rhodobacter sphaeroides}
Length = 225
Score = 41.9 bits (99), Expect = 3e-06
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 8 PFGKVPCIEINGVQYHQSRAIGRYLARQAG--LYGMDGPE 45
P G++PC+E G+ +S AI ++AR G L PE
Sbjct: 60 PLGQIPCLEEEGLILTESLAITLHIARTQGGQLGPRSEPE 99
>3ay8_A Glutathione S-transferase; GST fold, GST binding, cytosolic;
2.10A {Bombyx mori}
Length = 216
Score = 40.7 bits (96), Expect = 8e-06
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Query: 8 PFGKVPCIEINGVQYHQSRAIGRYLARQAGLYGMDGP 44
P VP ++ N +SRAI YLA + YG D
Sbjct: 51 PQHCVPTLDDNNFVLWESRAIACYLADK---YGKDDQ 84
>2imi_A Epsilon-class glutathione S-transferase; HET: GSH; 1.40A
{Anopheles gambiae} PDB: 2il3_A* 2imk_A*
Length = 221
Score = 40.3 bits (95), Expect = 9e-06
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Query: 8 PFGKVPCIEINGVQYHQSRAIGRYLARQAGLYGMDGP 44
P +P ++ NG +S AI YL + YG D
Sbjct: 51 PQHTIPVLDDNGTIITESHAIMIYLVTK---YGKDDS 84
>3qav_A RHO-class glutathione S-transferase; cytosol; 2.10A {Laternula
elliptica} PDB: 3qaw_A*
Length = 243
Score = 40.0 bits (94), Expect = 1e-05
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 3/38 (7%)
Query: 8 PFGKVPCIEINGVQYHQSRAIGRYLARQAG---LYGMD 42
P G+VP V ++S AI YL + L+ D
Sbjct: 74 PRGQVPTFTDGDVVVNESTAICMYLEEKYPKVPLFPSD 111
>1nhy_A EF-1-gamma 1, elongation factor 1-gamma 1; protein synthesis,
GST-like, translation; 3.00A {Saccharomyces cerevisiae}
SCOP: a.45.1.1 c.47.1.5
Length = 219
Score = 39.8 bits (93), Expect = 1e-05
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 8 PFGKVPCIEI-NGVQYHQSRAIGRYLARQAGLYGMDGP 44
P KVP G + ++ AI YL + + M
Sbjct: 45 PLKKVPAFVGPKGYKLTEAMAINYYLVKLSQDDKMKTQ 82
>3ibh_A GST-II, saccharomyces cerevisiae GTT2; glutathione S-transferase,
transferase; HET: GSH; 2.10A {Saccharomyces cerevisiae}
PDB: 3erf_A* 3erg_A*
Length = 233
Score = 39.2 bits (92), Expect = 2e-05
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 4/42 (9%)
Query: 8 PFGKVPCIEI-NGVQYHQSRAIGRYLARQAG---LYGMDGPE 45
G VP +E+ +G + AI Y+ G L G E
Sbjct: 68 YSGTVPVLELDDGTLIAECTAITEYIDALDGTPTLTGKTPLE 109
>1v2a_A Glutathione transferase GST1-6; glutathione S-transferase,
detoxification, xenobiotics; HET: GTS; 2.15A {Anopheles
dirus} SCOP: a.45.1.1 c.47.1.5
Length = 210
Score = 39.1 bits (92), Expect = 3e-05
Identities = 11/37 (29%), Positives = 14/37 (37%), Gaps = 3/37 (8%)
Query: 8 PFGKVPCIEINGVQYHQSRAIGRYLARQAGLYGMDGP 44
P +P + NG +S AI YL Y D
Sbjct: 47 PQHTIPTLVDNGHVVWESYAIVLYLVET---YAKDDT 80
>2ycd_A Glutathione S-transferase; SOIL bacteria, herbicide detoxification;
HET: GTB; 1.40A {Agrobacterium tumefaciens} PDB: 3lq7_A
Length = 230
Score = 38.8 bits (91), Expect = 3e-05
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 8 PFGKVPCIEINGVQYHQSRAIGRYLARQ-AGLYGMDGPE 45
PFG++P E + +S AI ++A+ +GL D
Sbjct: 69 PFGQIPSYEQGDLILFESGAIVMHIAQHHSGLLPEDQLR 107
>1r5a_A Glutathione transferase; glutathione S-transferase, GST, GSH,
mosquito, detoxification, xenobiotics; HET: GTS; 2.50A
{Anopheles cracens} SCOP: a.45.1.1 c.47.1.5
Length = 218
Score = 38.0 bits (89), Expect = 7e-05
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 8 PFGKVPCIEINGVQYHQSRAIGRYLARQAG 37
P +P ++ +G+ +SR I YL G
Sbjct: 50 PQHCIPTMDDHGLVLWESRVILSYLVSAYG 79
>1pn9_A GST class-delta, glutathione S-transferase 1-6; protein inhibitor
complex; HET: GTX; 2.00A {Anopheles gambiae} SCOP:
a.45.1.1 c.47.1.5
Length = 209
Score = 37.5 bits (88), Expect = 9e-05
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Query: 8 PFGKVPCIEINGVQYHQSRAIGRYLARQAG----LYGMD 42
P +P + NG +SRAI YLA + G LY D
Sbjct: 48 PQHCIPTLVDNGFALWESRAIQIYLAEKYGKDDKLYPKD 86
>1e6b_A Glutathione S-transferase; 1.65A {Arabidopsis thaliana} SCOP:
a.45.1.1 c.47.1.5
Length = 221
Score = 37.2 bits (87), Expect = 1e-04
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 8 PFGKVPCIEINGVQYHQSRAIGRYLARQAG 37
P G VP + V + S AI YL +
Sbjct: 56 PMGTVPALVDGDVVINDSFAIIMYLDEKYP 85
>2v6k_A Maleylpyruvate isomerase; glutathione-S-transferase, GST,
plasmid, bacterial, biodegradation, fumaryl pyruvate;
HET: TGG; 1.3A {Ralstonia SP} PDB: 2jl4_A*
Length = 214
Score = 37.3 bits (87), Expect = 1e-04
Identities = 10/38 (26%), Positives = 13/38 (34%), Gaps = 3/38 (7%)
Query: 8 PFGKVPCIEINGVQYHQSRAIGRYLAR---QAGLYGMD 42
P VP ++ QS AI +L L D
Sbjct: 50 PQQLVPALDTGAQVLIQSPAIIEWLEEQYPTPALLPAD 87
>3lxz_A Glutathione S-transferase family protein; structural genomics,
PP0183, PSI-2, protein structure initiative; 1.76A
{Pseudomonas putida} PDB: 3pr8_A*
Length = 229
Score = 37.3 bits (87), Expect = 1e-04
Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
Query: 8 PFGKVPCIEINGVQYHQSRAIGRYLAR---QAGLYGMDGPEMDMKIDMIVDTIDD 59
P GKVP +E ++ I Y+ + L D P K+ ++ I+
Sbjct: 46 PRGKVPVLETEHGFLSETSVILDYIEQTQGGKALLPAD-PFGQAKVRELLKEIEL 99
>3ein_A GST class-theta, glutathione S-transferase 1-1; delta-class GST;
HET: GSH; 1.13A {Drosophila melanogaster} PDB: 3mak_A*
3f6f_A 3gh6_A* 1jlv_A*
Length = 209
Score = 36.8 bits (86), Expect = 2e-04
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
Query: 8 PFGKVPCIEINGVQYHQSRAIGRYLARQAG----LYGMD 42
P +P + NG +SRAI YL + G LY
Sbjct: 49 PQHTIPTLVDNGFALWESRAIQVYLVEKYGKTDSLYPKC 87
>3bby_A Uncharacterized GST-like protein YFCF; NP_416804.1, glutathione
S-transferase, N-terminal domain, S genomics; 1.85A
{Escherichia coli}
Length = 215
Score = 37.0 bits (86), Expect = 2e-04
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 8 PFGKVPCIEINGVQYHQSRAIGRYLARQ 35
+VP ++I+ + +S AI YL +
Sbjct: 56 QTRRVPLLQIDDFELSESSAIAEYLEDR 83
>3m0f_A Uncharacterized protein GST_N; PSI-2, NYSGXRC, glutathione,
structural genomics, protein structure initiative; HET:
GSH; 1.60A {Pseudomonas fluorescens} PDB: 3lxt_A*
Length = 213
Score = 36.6 bits (85), Expect = 2e-04
Identities = 13/58 (22%), Positives = 18/58 (31%), Gaps = 6/58 (10%)
Query: 8 PFGKVPCIEI-NGVQYHQSRAIGRYLARQAG----LYGMDGPEMDMKIDMIVDTIDDM 60
P K P + G S I YL AG L P+ ++ +V
Sbjct: 47 PVVKAPTLVCEGGEVLMDSSLIIDYLETLAGPQRSLMPTALPQR-LRELRLVGLALAA 103
>2cz2_A Maleylacetoacetate isomerase; structural genomics, GST, GSTZ1-1,
NPPSFA, national project protein structural and
functional analyses; HET: GSH; 1.40A {Mus musculus}
PDB: 2cz3_A 1fw1_A*
Length = 223
Score = 36.1 bits (84), Expect = 4e-04
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 8 PFGKVPCIEINGVQYHQSRAIGRYLA 33
P +VP ++I+G+ QS AI YL
Sbjct: 62 PMKQVPALKIDGITIVQSLAIMEYLE 87
>3ubk_A Glutathione transferase; GSH binding; 1.95A {Leptospira
interrogans serovar lai} PDB: 3ubl_A*
Length = 242
Score = 34.3 bits (79), Expect = 0.001
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 8 PFGKVPCIEINGVQYHQSRAIGRYLA 33
P GK+P +E++G +S AI +L
Sbjct: 47 PMGKIPVLEMDGKFIFESGAILEFLD 72
>3niv_A Glutathione S-transferase; structural genomics, PSI-2, protein
structure initiative, NE SGX research center for
structural genomics; 2.30A {Legionella pneumophila
subsp}
Length = 222
Score = 34.3 bits (79), Expect = 0.002
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 8 PFGKVPCIEINGVQYHQSRAIGRYLA 33
P VP ++ING QS AI YL
Sbjct: 52 PQELVPSLDINGQILSQSMAIIDYLE 77
>3ir4_A Glutaredoxin 2; glutathione, IDP00895, structural genomics, for
structural genomics of infectious diseases, csgid,
oxidoreductase; HET: MSE GSH; 1.20A {Salmonella enterica
subsp} PDB: 1g7o_A
Length = 218
Score = 34.2 bits (78), Expect = 0.002
Identities = 9/57 (15%), Positives = 21/57 (36%), Gaps = 4/57 (7%)
Query: 8 PFGKVPCIEI-NGVQYHQSRAIGRYLARQAG---LYGMDGPEMDMKIDMIVDTIDDM 60
VP ++ + +S I Y+ G L G P ++ + + ++ +
Sbjct: 47 GQKMVPILQKDDSRYLPESMDIVHYVDNLDGKPLLTGKRNPAIEEWLRKVNGYVNQL 103
>3m8n_A Possible glutathione S-transferase; PSI-II, structural genomics,
protein structure initiative, nysgxrc; 2.04A
{Rhodopseudomonas palustris}
Length = 225
Score = 33.8 bits (78), Expect = 0.002
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 8 PFGKVPCIEI-NGVQYHQSRAIGRYLARQAGLYGMDGPE 45
P G+VP +E G +S AI YLA L +
Sbjct: 51 PSGQVPLLETAPGRYLAESNAILWYLAVGTSLAPDTRMD 89
>2r4v_A XAP121, chloride intracellular channel protein 2; chloride
intracellular channels, CLIC2, pore-forming protein
ryanodine receptor, chloride channel; HET: GSH; 1.85A
{Homo sapiens} PDB: 2r5g_A 2per_A*
Length = 247
Score = 33.0 bits (75), Expect = 0.004
Identities = 8/58 (13%), Positives = 14/58 (24%), Gaps = 2/58 (3%)
Query: 7 YPFGKVPCIEINGVQYHQSRAIGRYLARQAG--LYGMDGPEMDMKIDMIVDTIDDMRQ 62
P P + N I +L + Y P+ D+ +
Sbjct: 65 APGTNPPFLVYNKELKTDFIKIEEFLEQTLAPPRYPHLSPKYKESFDVGCNLFAKFSA 122
>1n2a_A Glutathione S-transferase; HET: GTS; 1.90A {Escherichia coli}
SCOP: a.45.1.1 c.47.1.5 PDB: 1a0f_A*
Length = 201
Score = 32.6 bits (75), Expect = 0.006
Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 8 PFGKVPCIEI-NGVQYHQSRAIGRYLARQAGLYGMDGPE 45
P G+VP + + +G + AI +YLA + P
Sbjct: 48 PKGQVPALLLDDGTLLTEGVAIMQYLADSVPDRQLLAPV 86
>3f6d_A Adgstd4-4, glutathione transferase GST1-4; HET: GTX; 1.70A
{Anopheles dirus} PDB: 3f63_A* 1jlw_A* 3g7i_A* 3g7j_A*
Length = 219
Score = 32.2 bits (74), Expect = 0.007
Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
Query: 8 PFGKVPCIEI-NGVQYHQSRAIGRYLARQAGLYGMDGPEMDMK 49
P +P + +G +SRAI YL + YG ++ +
Sbjct: 48 PQHCIPTLVDEDGFVLWESRAIQIYLVEK---YGAHDADLAER 87
>2dsa_A Glutathione S-transferase; HET: GSH HPX; 2.10A {Burkholderia
xenovorans} PDB: 2gdr_A*
Length = 203
Score = 32.2 bits (74), Expect = 0.008
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 8 PFGKVPCIEI-NGVQYHQSRAIGRYLARQAG 37
P G VPC+++ +G + AI +Y+A Q
Sbjct: 48 PAGYVPCLQLDDGRTLTEGPAIVQYVADQVP 78
>2x64_A Glutathione-S-transferase; detoxification enzyme; HET: GSH; 2.30A
{Xylella fastidiosa}
Length = 207
Score = 31.8 bits (73), Expect = 0.012
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 8 PFGKVPCIEINGVQYHQSRAIGRYLARQAG 37
P G VP +++ Q+ AI Y+ A
Sbjct: 47 PSGAVPALQVGDWVLTQNAAILNYITDIAP 76
>2ahe_A Chloride intracellular channel protein 4;
glutathione-S-transferase superfamily, CLIC4, NCC27,
chloride ION channel, metal transport; 1.80A {Homo
sapiens} PDB: 2d2z_A
Length = 267
Score = 31.5 bits (71), Expect = 0.013
Identities = 7/28 (25%), Positives = 8/28 (28%)
Query: 5 NHYPFGKVPCIEINGVQYHQSRAIGRYL 32
N P P I N I +L
Sbjct: 68 NLAPGTHPPFITFNSEVKTDVNKIEEFL 95
>3lyp_A Stringent starvation protein A; structural genomics,
GST-superfamily, SSPA, stringent starva protein A
homolog, PSI-2; 1.60A {Pseudomonas fluorescens} PDB:
3mdk_A
Length = 215
Score = 31.5 bits (72), Expect = 0.015
Identities = 6/25 (24%), Positives = 12/25 (48%)
Query: 8 PFGKVPCIEINGVQYHQSRAIGRYL 32
P+G +P + + +S + YL
Sbjct: 53 PYGSLPTLVDRDLALWESTVVMEYL 77
>3ic8_A Uncharacterized GST-like proteinprotein; glutathione, transferase,
PSI, MCSG, structural genomics; 2.40A {Pseudomonas
syringae PV}
Length = 310
Score = 31.3 bits (70), Expect = 0.016
Identities = 7/53 (13%), Positives = 18/53 (33%)
Query: 8 PFGKVPCIEINGVQYHQSRAIGRYLARQAGLYGMDGPEMDMKIDMIVDTIDDM 60
+ K P ++I Y + + R L ++ + + + D +
Sbjct: 49 GYRKTPVLQIGADIYCDTALMARRLEQEKASPAFYPQGQEFAVAGLAAWADSV 101
>3cbu_A Probable GST-related protein; thioredoxin fold, GST C-terminal
domain-like fold, structura genomics, joint center for
structural genomics; 2.05A {Ralstonia eutropha}
Length = 214
Score = 30.8 bits (70), Expect = 0.023
Identities = 9/25 (36%), Positives = 11/25 (44%)
Query: 8 PFGKVPCIEINGVQYHQSRAIGRYL 32
P GKVP + +S I YL
Sbjct: 44 PAGKVPYMITESGSLCESEVINEYL 68
>3n5o_A Glutathione transferase; seattle structural genomics center for
infectious disease, S GST, pathogenic fungus,
coccidioidomycosis; HET: GSH; 1.85A {Coccidioides
immitis} PDB: 3lg6_A*
Length = 235
Score = 30.8 bits (70), Expect = 0.023
Identities = 8/39 (20%), Positives = 12/39 (30%), Gaps = 11/39 (28%)
Query: 8 PFGKVPCIEINGVQYH-----------QSRAIGRYLARQ 35
P VP + ++ + QS A YL
Sbjct: 57 PTNTVPLLVVSNINNTVSPSSASFSIGQSLAALEYLEEA 95
>3fy7_A Chloride intracellular channel protein 3; GST, glutathione, CLIC,
chloride channel, ION transport, ionic channel, nucleus,
transport, gated channel; 1.95A {Homo sapiens} PDB:
3kjy_A
Length = 250
Score = 31.1 bits (70), Expect = 0.023
Identities = 7/58 (12%), Positives = 15/58 (25%), Gaps = 2/58 (3%)
Query: 5 NHYPFGKVPCIEINGVQYHQSRAIGRYLARQAG--LYGMDGPEMDMKIDMIVDTIDDM 60
+ P ++P + + + I +L G + P D
Sbjct: 75 DFAPGSQLPILLYDSDAKTDTLQIEDFLEETLGPPDFPSLAPRYRESNTAGNDVFHKF 132
>3m3m_A Glutathione S-transferase; PSI-II, structural genomics, protein
structure initiative, N SGX research center for
structural genomics; HET: GSH; 1.75A {Pseudomonas
fluorescens}
Length = 210
Score = 30.7 bits (70), Expect = 0.032
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 8 PFGKVPCIEI-NGVQYHQSRAIGRYLARQAGLYGMDGPE 45
P GK+P +E+ +G +S AI +LA + +
Sbjct: 51 PNGKIPVLELEDGTCLWESNAILNFLADGSQFLPSEPRL 89
>1pmt_A PMGST, GST B1-1, glutathione transferase;
glutathione-conjugating, A putative oxidoreduct; HET:
GSH; 2.50A {Proteus mirabilis} SCOP: a.45.1.1 c.47.1.5
PDB: 2pmt_A*
Length = 203
Score = 29.8 bits (68), Expect = 0.061
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 8 PFGKVPCIEI-NGVQYHQSRAIGRYLARQAGLYGMDGP 44
P G+VP +++ NG + AI +YLA + P
Sbjct: 48 PKGQVPVLQLDNGDILTEGVAIVQYLADLKPDRNLIAP 85
>1yy7_A SSPA, stringent starvation protein A; GST fold, transcription;
HET: CIT; 2.02A {Yersinia pestis}
Length = 213
Score = 29.6 bits (67), Expect = 0.066
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 8 PFGKVPCIEINGVQYHQSRAIGRYL 32
P+ VP + + ++SR I YL
Sbjct: 55 PYRTVPTLVDRELTLYESRIIMEYL 79
>2yv7_A CG10997-PA, LD46306P, CLIC; dmclic, chloride ION channel, GST fold,
metal transport; 1.70A {Drosophila melanogaster}
Length = 260
Score = 29.3 bits (65), Expect = 0.082
Identities = 10/62 (16%), Positives = 23/62 (37%), Gaps = 3/62 (4%)
Query: 7 YPFGKVPCIEINGVQYHQSRAIGRYLARQAGLYG---MDGPEMDMKIDMIVDTIDDMRQG 63
+ P + NG+ ++ I R++ + + E+ I+ + + M
Sbjct: 79 FEATHPPILIDNGLAILENEKIERHIMKNIPGGYNLFVQDKEVATLIENLYVKLKLMLVK 138
Query: 64 KD 65
KD
Sbjct: 139 KD 140
>3lyk_A Stringent starvation protein A homolog; structural genomics,
GST-superfamily, SSPA, PSI-2, protein structure
initiative; 2.10A {Haemophilus influenzae}
Length = 216
Score = 29.2 bits (66), Expect = 0.084
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 8 PFGKVPCIEINGVQYHQSRAIGRYL 32
P+G VP + + SR I YL
Sbjct: 51 PYGTVPTLVDRDLVLFNSRIIMEYL 75
>1k0m_A CLIC1, NCC27, chloride intracellular channel protein 1;
glutathione-S-tranferase superfamily, chloride ION
channel, metal transport; 1.40A {Homo sapiens} SCOP:
a.45.1.1 c.47.1.5 PDB: 1k0n_A* 1k0o_A 1rk4_A 3uvh_A
3o3t_A 3p90_A 3qr6_A 3p8w_A 3tgz_A 3ma4_A 3swl_A
Length = 241
Score = 29.1 bits (65), Expect = 0.11
Identities = 8/66 (12%), Positives = 17/66 (25%), Gaps = 5/66 (7%)
Query: 5 NHYPFGKVPCIEINGVQYHQSRAIGRYLARQAG-----LYGMDGPEMDMKIDMIVDTIDD 59
P G++P + + + I +L PE + I
Sbjct: 57 KLCPGGELPFLLYGTEVHTDTNKIEEFLEAVLCPPRYPKLAALNPESNTAGLDIFAKFSA 116
Query: 60 MRQGKD 65
+ +
Sbjct: 117 YIKNSN 122
>2pvq_A Glutathione S-transferase; xenobiotics detoxification, H-site;
HET: GSH; 1.80A {Ochrobactrum anthropi} PDB: 2nto_A*
Length = 201
Score = 28.7 bits (65), Expect = 0.12
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 8 PFGKVPCIEI-NGVQYHQSRAIGRYLARQAG 37
P G VP +E+ G Q+ AI +Y+ +
Sbjct: 48 PRGAVPALEVKPGTVITQNAAILQYIGDHSD 78
>3uar_A Glutathione S-transferase; GSH binding site; HET: GSH; 2.60A
{Methylococcus capsulatus} PDB: 3uap_A*
Length = 227
Score = 28.8 bits (65), Expect = 0.14
Identities = 9/31 (29%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 8 PFGKVPCIEI-NGVQYHQSRAIGRYLARQAG 37
P G VP +++ +G + + I +YLA
Sbjct: 50 PKGYVPALQLDDGQVLTEDQVILQYLADLKP 80
>1f2e_A Glutathione S-transferase; GST complexed with glutathione,
thioredoxin superfamily fold transferase; HET: GSH;
2.30A {Sphingomonas paucimobilis} SCOP: a.45.1.1
c.47.1.5
Length = 201
Score = 28.3 bits (64), Expect = 0.17
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 8 PFGKVPCIEI-NGVQYHQSRAIGRYLARQAG 37
P GKVP + + +G ++ AI Y+A Q
Sbjct: 48 PSGKVPALTLDSGETLTENPAILLYIADQNP 78
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint
center for structural genomics, JCSG, protein structu
initiative, PSI; 2.10A {Thermotoga maritima} SCOP:
c.37.1.12
Length = 256
Score = 25.6 bits (57), Expect = 1.8
Identities = 9/40 (22%), Positives = 17/40 (42%)
Query: 31 YLARQAGLYGMDGPEMDMKIDMIVDTIDDMRQGKDIIQSY 70
YL AG Y E++ ++ + + KD + +Y
Sbjct: 108 YLRFVAGFYASSSSEIEEMVERATEIAGLGEKIKDRVSTY 147
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase;
riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A
{Mycobacterium tuberculosis} PDB: 3mgz_A 3mk5_A
Length = 206
Score = 25.6 bits (57), Expect = 1.8
Identities = 5/20 (25%), Positives = 11/20 (55%)
Query: 48 MKIDMIVDTIDDMRQGKDII 67
++D + + D+ GK +I
Sbjct: 2 TRLDSVERAVADIAAGKAVI 21
>3q18_A GSTO-2, glutathione S-transferase omega-2; glutathione
transferase, dehydroascorbate reductase, reductase;
1.70A {Homo sapiens} PDB: 3q19_A* 3qag_A*
Length = 239
Score = 25.4 bits (56), Expect = 2.1
Identities = 8/26 (30%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Query: 8 PFGKVPCIEI-NGVQYHQSRAIGRYL 32
PFG +P +E ++S YL
Sbjct: 68 PFGHIPVLETSQSQLIYESVIACEYL 93
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin
biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase,
synthetic gene, ISO; 1.60A {Candida albicans} SCOP:
d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Length = 204
Score = 25.2 bits (56), Expect = 2.2
Identities = 4/22 (18%), Positives = 10/22 (45%)
Query: 46 MDMKIDMIVDTIDDMRQGKDII 67
M I + ++ + G+ +I
Sbjct: 1 MTNIFTPIEEALEAYKNGEFLI 22
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin
biosynthesi antimicrobial target, structure-based
design, isomerase; 0.98A {Magnaporthe grisea} SCOP:
d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Length = 233
Score = 24.9 bits (55), Expect = 3.0
Identities = 5/24 (20%), Positives = 9/24 (37%)
Query: 44 PEMDMKIDMIVDTIDDMRQGKDII 67
D I D I + G+ ++
Sbjct: 6 SIPKSNFDAIPDVIQAFKNGEFVV 29
>2ipc_A Preprotein translocase SECA subunit; nucleotide binding fold,
ATPase, parallel dimer; 2.80A {Thermus thermophilus}
Length = 997
Score = 24.8 bits (54), Expect = 3.5
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 20 VQYHQSRAIGRYLARQAGLYGMDGPEMDMKIDMIVDTIDDM 60
V Q I Y R+ L G D + I M+ +T+ +
Sbjct: 758 VLSRQREVI--YAQRRLILLGKDEEVKEAAIGMVEETVASL 796
>2ako_A Glutamate 5-kinase; structural genomics, PSI, protein structure
initiative, NEW YORK SGX research center for structural
genomics, nysgxrc; HET: ADP; 2.20A {Campylobacter
jejuni} SCOP: c.73.1.3
Length = 251
Score = 24.4 bits (54), Expect = 5.1
Identities = 2/19 (10%), Positives = 10/19 (52%)
Query: 49 KIDMIVDTIDDMRQGKDII 67
++ +V + + + ++I
Sbjct: 23 RLKNLVAFLAKLMEKYEVI 41
>2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide
synthesis, alpha/beta- hydrolases, catalytic triade,
hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A*
Length = 244
Score = 24.0 bits (52), Expect = 5.9
Identities = 7/37 (18%), Positives = 14/37 (37%), Gaps = 3/37 (8%)
Query: 26 RAIGRYLARQAGLYGMDGPEMDMKIDMIVDTIDDMRQ 62
+ + L +A +YG E D I + + +
Sbjct: 39 KDLALQLNHKAAVYGFHFIEED---SRIEQYVSRITE 72
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion,
msrab, linker, hinge, cell membrane, membrane,
multifunctional enzyme, oxidoreductase; 2.40A
{Streptococcus pneumoniae}
Length = 313
Score = 24.3 bits (53), Expect = 6.2
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 53 IVDTIDDMRQGKDIIQSYRT 72
++D + +QG D + YRT
Sbjct: 75 VIDPLSINQQGNDRGRQYRT 94
>3lxq_A Uncharacterized protein VP1736; alkaline, phosphatase, MDOB,
sulfatase, PSI, MCSG, structural genomics; 1.95A {Vibrio
parahaemolyticus}
Length = 450
Score = 24.0 bits (52), Expect = 7.2
Identities = 8/50 (16%), Positives = 21/50 (42%), Gaps = 11/50 (22%)
Query: 1 MTTVNHYPFG----KVPCIEINGVQYHQS-----RAIGRYL--ARQAGLY 39
T+ NH P+ K+ + + + + A+G + A+++ +
Sbjct: 246 FTSSNHSPYEYPEGKIEQYDSEHMTRNNAVKYSDYALGTFFDKAKKSSYW 295
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.322 0.140 0.419
Gapped
Lambda K H
0.267 0.0700 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,293,222
Number of extensions: 69767
Number of successful extensions: 317
Number of sequences better than 10.0: 1
Number of HSP's gapped: 279
Number of HSP's successfully gapped: 90
Length of query: 81
Length of database: 6,701,793
Length adjustment: 50
Effective length of query: 31
Effective length of database: 5,305,743
Effective search space: 164478033
Effective search space used: 164478033
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (23.5 bits)