RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9882
(81 letters)
>d1tu7a2 c.47.1.5 (A:1-77) Class pi GST {Onchocerca volvulus
[TaxId: 6282]}
Length = 77
Score = 45.4 bits (107), Expect = 8e-09
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 5 NHYPFGKVPCIEINGVQYHQSRAIGRYLARQAGL 38
+ + FG++PC+ Q QS AI R+LAR+ L
Sbjct: 43 SQFQFGQLPCLYDGDQQIVQSGAILRHLARKYNL 76
>d2a2ra2 c.47.1.5 (A:1-77) Class pi GST {Human (Homo sapiens)
[TaxId: 9606]}
Length = 77
Score = 44.3 bits (104), Expect = 3e-08
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 5 NHYPFGKVPCIEINGVQYHQSRAIGRYLARQAG 37
+G++P + + +QS I R+L R G
Sbjct: 45 ASCLYGQLPKFQDGDLTLYQSNTILRHLGRTLG 77
>d1tw9a2 c.47.1.5 (A:1-77) Class sigma GST {Heligmosomoides
polygyrus [TaxId: 6339]}
Length = 77
Score = 42.6 bits (100), Expect = 1e-07
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 5 NHYPFGKVPCIEINGVQYHQSRAIGRYLARQAG 37
+PFG+VP +E++G Q QS+AI RYLA+ G
Sbjct: 44 ATFPFGQVPVLEVDGQQLAQSQAICRYLAKTFG 76
>d1m0ua2 c.47.1.5 (A:47-122) Class sigma GST {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 76
Score = 42.3 bits (99), Expect = 1e-07
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 5 NHYPFGKVPCIEINGVQYHQSRAIGRYLARQAG 37
P G++P +E++G + HQS ++ R+LA+ G
Sbjct: 44 PTMPMGQMPVLEVDGKRVHQSISMARFLAKTVG 76
>d2cvda2 c.47.1.5 (A:2-75) Class sigma GST {Human (Homo sapiens)
[TaxId: 9606]}
Length = 74
Score = 41.9 bits (98), Expect = 2e-07
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 1 MTTVNHYPFGKVPCIEINGVQYHQSRAIGRYLAR 34
+ PFGK+P +E++G+ HQS AI RYL +
Sbjct: 39 PEIKSTLPFGKIPILEVDGLTLHQSLAIARYLTK 72
>d1oe8a2 c.47.1.5 (A:4-84) Class alpha GST {Blood fluke
(Schistosoma haematobium) [TaxId: 6185]}
Length = 81
Score = 40.0 bits (93), Expect = 1e-06
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 8 PFGKVPCIEINGVQYHQSRAIGRYLARQAGL 38
P K+ + +S AI RY+A++ +
Sbjct: 51 PAVKITDNHGHVKWMVESLAIARYMAKKHHM 81
>d1duga2 c.47.1.5 (A:1-80) Class alpha GST {Schistosoma japonicum
[TaxId: 6182]}
Length = 80
Score = 39.7 bits (92), Expect = 2e-06
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 6 HYPFGKVPCIEINGVQYHQSRAIGRYLARQAGL 38
F +P V+ QS AI RY+A + +
Sbjct: 48 GLEFPNLPYYIDGDVKLTQSMAIIRYIADKHNM 80
>d2gsqa2 c.47.1.5 (A:1-75) Class sigma GST {Squid (Ommastrephes
sloani pacificus) [TaxId: 6634]}
Length = 75
Score = 38.9 bits (90), Expect = 3e-06
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 5 NHYPFGKVPCIEINGVQYHQSRAIGRYLARQAG 37
+P ++I+G + QS I R+LAR+ G
Sbjct: 43 ATMYSNAMPVLDIDGTKMSQSMCIARHLAREFG 75
>d1gula2 c.47.1.5 (A:4-80) Class alpha GST {Human (Homo sapiens),
(a1-1) [TaxId: 9606]}
Length = 77
Score = 38.2 bits (88), Expect = 5e-06
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 5 NHYPFGKVPCIEINGVQYHQSRAIGRYLARQ 35
NH F +VP +EI+G++ Q+R+I Y+A +
Sbjct: 45 NHLLFQQVPMVEIDGMKLVQTRSILHYIADK 75
>d1k3ya2 c.47.1.5 (A:2-80) Class alpha GST {Human (Homo sapiens),
(a1-1) [TaxId: 9606]}
Length = 79
Score = 38.0 bits (88), Expect = 7e-06
Identities = 12/28 (42%), Positives = 20/28 (71%)
Query: 8 PFGKVPCIEINGVQYHQSRAIGRYLARQ 35
F +VP +EI+G++ Q+RAI Y+A +
Sbjct: 50 MFQQVPMVEIDGMKLVQTRAILNYIASK 77
>d1fhea2 c.47.1.5 (A:1-80) Class alpha GST {Fasciola hepatica
[TaxId: 6192]}
Length = 80
Score = 37.7 bits (87), Expect = 1e-05
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 6 HYPFGKVPCIEINGVQYHQSRAIGRYLARQAGL 38
+P + + QS AI RY+A + G+
Sbjct: 48 GLDLPNLPYYIDDKCKLTQSVAIMRYIADKHGM 80
>d1b48a2 c.47.1.5 (A:2-79) Class alpha GST {Mouse (Mus musculus),
(a1-4) [TaxId: 10090]}
Length = 78
Score = 36.5 bits (84), Expect = 2e-05
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 6 HYPFGKVPCIEINGVQYHQSRAIGRYLARQ 35
H FG+VP +EI+G+ Q+RAI YLA +
Sbjct: 48 HLLFGQVPLVEIDGMMLTQTRAILSYLAAK 77
>d2c4ja2 c.47.1.5 (A:2-85) Class mu GST {Human (Homo sapiens)
[TaxId: 9606]}
Length = 84
Score = 35.8 bits (82), Expect = 6e-05
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 8 PFGKVPCIEINGVQYHQSRAIGRYLARQ 35
F +P + + QS AI RY+AR+
Sbjct: 55 DFPNLPYLIDGTHKITQSNAILRYIARK 82
>d1okta2 c.47.1.5 (A:1-85) Pf GST {Malarial parasite (Plasmodium
falciparum) [TaxId: 5833]}
Length = 85
Score = 35.5 bits (81), Expect = 8e-05
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 6 HYPFGKVPCIEINGVQYHQSRAIGRYLARQAGL 38
PF +VP ++I + QS+AI RYL+++ +
Sbjct: 53 DTPFEQVPILQIGDLILAQSQAIVRYLSKKYNI 85
>d2fnoa2 c.47.1.5 (A:1-87) Hypothetical protein
AGR_pAT_752p/Atu5508 {Agrobacterium tumefaciens [TaxId:
358]}
Length = 87
Score = 33.9 bits (77), Expect = 3e-04
Identities = 7/35 (20%), Positives = 11/35 (31%), Gaps = 2/35 (5%)
Query: 6 HYPFGKVPCIEINGVQYH--QSRAIGRYLARQAGL 38
F P + + Q AI YL + +
Sbjct: 53 PVAFMGPPVLIDRERNFAISQMPAIAIYLGERLDI 87
>d1oyja2 c.47.1.5 (A:2-85) Class tau GST {Rice (Oryza sativa)
[TaxId: 4530]}
Length = 84
Score = 31.9 bits (72), Expect = 0.002
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 6 HYPFGKVPCIEINGVQYHQSRAIGRYLAR 34
+ K+P + G +S I +YL
Sbjct: 49 NPVHRKIPVLLHAGRPVSESLVILQYLDD 77
>d1e6ba2 c.47.1.5 (A:8-87) Class zeta GST {Mouse-ear cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 80
Score = 30.7 bits (69), Expect = 0.005
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 5 NHYPFGKVPCIEINGVQYHQSRAIGRYLARQ 35
P G VP + V + S AI YL +
Sbjct: 46 KINPMGTVPALVDGDVVINDSFAIIMYLDEK 76
>d1axda2 c.47.1.5 (A:1-80) Class phi GST {Maize (Zea mays), type I
[TaxId: 4577]}
Length = 80
Score = 30.3 bits (68), Expect = 0.005
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 5 NHYPFGKVPCIEINGVQYHQSRAIGRYLARQ 35
PFG+VP ++ + +SRAI +Y AR+
Sbjct: 47 VRNPFGQVPALQDGDLYLFESRAICKYAARK 77
>d3gtub1 a.45.1.1 (B:85-224) Class mu GST {Human (Homo sapiens)
[TaxId: 9606]}
Length = 140
Score = 31.3 bits (70), Expect = 0.006
Identities = 7/30 (23%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 34 RQAGLYGMDGPEMDMKIDMIVDTIDDMRQG 63
R+ + G E +++D+I + + D R
Sbjct: 1 RKHNMCGET-EEEKIRVDIIENQVMDFRTQ 29
>d1r5aa2 c.47.1.5 (A:2-86) Class delta GST {Mosquito (Anopheles
dirus b), isozyme 1-5 [TaxId: 123217]}
Length = 85
Score = 29.1 bits (65), Expect = 0.018
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 6 HYPFGKVPCIEINGVQYHQSRAIGRYLARQAG 37
P +P ++ +G+ +SR I YL G
Sbjct: 47 LNPQHCIPTMDDHGLVLWESRVILSYLVSAYG 78
>d1fw1a2 c.47.1.5 (A:5-87) Class zeta GST {Human (Homo sapiens)
[TaxId: 9606]}
Length = 83
Score = 29.2 bits (65), Expect = 0.019
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 5 NHYPFGKVPCIEINGVQYHQSRAIGRYLARQ 35
P +VP ++I+G+ HQS AI YL
Sbjct: 48 ALNPMKQVPTLKIDGITIHQSLAIIEYLEET 78
>d1m0ua1 a.45.1.1 (A:123-249) Class sigma GST {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 127
Score = 29.2 bits (65), Expect = 0.026
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Query: 38 LYGMDGPEMDMKIDMIVDTIDDMRQ 62
L G P D++ID++VDTI+D R
Sbjct: 1 LCGAT-PWEDLQIDIVVDTINDFRL 24
>d1aw9a2 c.47.1.5 (A:2-82) Class phi GST {Maize (Zea mays), type
III [TaxId: 4577]}
Length = 81
Score = 28.5 bits (63), Expect = 0.033
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 5 NHYPFGKVPCIEINGVQYHQSRAIGRYLARQ 35
PFG++P + +SRAI RY+A +
Sbjct: 47 ALNPFGQIPALVDGDEVLFESRAINRYIASK 77
>d1jlva2 c.47.1.5 (A:1-84) Class delta GST {Mosquito (Anopheles
dirus b), isozyme 1-3 [TaxId: 123217]}
Length = 84
Score = 28.4 bits (63), Expect = 0.035
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 6 HYPFGKVPCIEINGVQYHQSRAIGRYLARQAG 37
P +P + NG +SRAI YLA + G
Sbjct: 46 INPQHCIPTLVDNGFALWESRAICTYLAEKYG 77
>d2cvda1 a.45.1.1 (A:76-199) Class sigma GST {Human (Homo sapiens)
[TaxId: 9606]}
Length = 124
Score = 28.6 bits (63), Expect = 0.047
Identities = 9/25 (36%), Positives = 11/25 (44%), Gaps = 1/25 (4%)
Query: 38 LYGMDGPEMDMKIDMIVDTIDDMRQ 62
L G +D IVDT+DD
Sbjct: 2 LAGNT-EMEQCHVDAIVDTLDDFMS 25
>d1g7oa2 c.47.1.5 (A:1-75) Glutaredoxin 2 {Escherichia coli
[TaxId: 562]}
Length = 75
Score = 27.4 bits (60), Expect = 0.069
Identities = 6/33 (18%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Query: 6 HYPFGKVPCIEI-NGVQYHQSRAIGRYLARQAG 37
+VP ++ + +S I Y+ + G
Sbjct: 42 MVGQKQVPILQKDDSRYMPESMDIVHYVDKLDG 74
>d1nhya2 c.47.1.5 (A:1-75) GST-like domain of elongation factor
1-gamma {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 75
Score = 27.3 bits (60), Expect = 0.073
Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 8 PFGKVPCIEI-NGVQYHQSRAIGRYLARQA 36
P KVP G + ++ AI YL + +
Sbjct: 45 PLKKVPAFVGPKGYKLTEAMAINYYLVKLS 74
>d2c4ja1 a.45.1.1 (A:86-218) Class mu GST {Human (Homo sapiens)
[TaxId: 9606]}
Length = 133
Score = 27.7 bits (61), Expect = 0.087
Identities = 5/25 (20%), Positives = 11/25 (44%), Gaps = 1/25 (4%)
Query: 38 LYGMDGPEMDMKIDMIVDTIDDMRQ 62
L G + ++ D++ + D R
Sbjct: 1 LCGES-EKEQIREDILENQFMDSRM 24
>d2gsqa1 a.45.1.1 (A:76-202) Class sigma GST {Squid (Ommastrephes
sloani pacificus) [TaxId: 6634]}
Length = 127
Score = 27.8 bits (61), Expect = 0.092
Identities = 6/26 (23%), Positives = 11/26 (42%), Gaps = 1/26 (3%)
Query: 38 LYGMDGPEMDMKIDMIVDTIDDMRQG 63
L G ++D I +T+ D+
Sbjct: 1 LDGKT-SLEKYRVDEITETLQDIFND 25
>d1k0ma2 c.47.1.5 (A:6-91) Chloride intracellular channel 1
(clic1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 86
Score = 27.0 bits (59), Expect = 0.13
Identities = 5/27 (18%), Positives = 11/27 (40%)
Query: 7 YPFGKVPCIEINGVQYHQSRAIGRYLA 33
P G++P + + + I +L
Sbjct: 54 CPGGELPFLLYGTEVHTDTNKIEEFLE 80
>d1okta1 a.45.1.1 (A:86-211) Pf GST {Malarial parasite (Plasmodium
falciparum) [TaxId: 5833]}
Length = 126
Score = 27.3 bits (60), Expect = 0.13
Identities = 4/15 (26%), Positives = 6/15 (40%)
Query: 48 MKIDMIVDTIDDMRQ 62
DMI + D+
Sbjct: 9 FYADMIFCGVQDIHY 23
>d1tw9a1 a.45.1.1 (A:78-206) Class sigma GST {Heligmosomoides
polygyrus [TaxId: 6339]}
Length = 129
Score = 27.4 bits (60), Expect = 0.13
Identities = 6/19 (31%), Positives = 7/19 (36%)
Query: 44 PEMDMKIDMIVDTIDDMRQ 62
P ID + D D R
Sbjct: 5 PFESALIDSLADAYTDYRA 23
>d1skva_ a.30.5.1 (A:) Hypothetical protein D-63 {Sulfolobus
virus-like particle SSV1 [TaxId: 244589]}
Length = 64
Score = 26.4 bits (58), Expect = 0.15
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 47 DMKIDMIVDTIDDMRQGKDIIQSYR 71
++KID I +D + GK Q +
Sbjct: 26 EIKIDRITGNMDKQKLGKAYFQVQK 50
>d1gnwa2 c.47.1.5 (A:2-85) Class phi GST {Mouse-ear cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 84
Score = 26.6 bits (58), Expect = 0.16
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 5 NHYPFGKVPCIEINGVQYHQSRAIGRYLARQAGLYGMDGPE 45
+ PFG+VP E ++ +SRAI +Y+A + Y G
Sbjct: 46 SRNPFGQVPAFEDGDLKLFESRAITQYIAHR---YENQGTN 83
>d2a2ra1 a.45.1.1 (A:78-209) Class pi GST {Human (Homo sapiens)
[TaxId: 9606]}
Length = 132
Score = 27.1 bits (59), Expect = 0.16
Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Query: 38 LYGMDGPEMDMKIDMIVDTIDDMRQ 62
LYG D + +DM+ D ++D+R
Sbjct: 1 LYGKD-QQEAALVDMVNDGVEDLRC 24
>d1k3ya1 a.45.1.1 (A:81-222) Class alpha GST {Human (Homo
sapiens), (a1-1) [TaxId: 9606]}
Length = 142
Score = 26.7 bits (58), Expect = 0.22
Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Query: 38 LYGMDGPEMDMKIDMIVDTIDDMRQ 62
LYG D + IDM ++ I D+ +
Sbjct: 1 LYGKD-IKERALIDMYIEGIADLGE 24
>d2gsta1 a.45.1.1 (A:85-217) Class mu GST {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 133
Score = 26.5 bits (58), Expect = 0.24
Identities = 6/26 (23%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Query: 38 LYGMDGPEMDMKIDMIVDTIDDMRQG 63
L G E ++ D++ + + D R
Sbjct: 1 LCGET-EEERIRADIVENQVMDNRMQ 25
>d1b48a1 a.45.1.1 (A:80-222) Class alpha GST {Mouse (Mus
musculus), (a1-4) [TaxId: 10090]}
Length = 143
Score = 26.6 bits (58), Expect = 0.25
Identities = 9/25 (36%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Query: 38 LYGMDGPEMDMKIDMIVDTIDDMRQ 62
LYG D + ++IDM D D+
Sbjct: 2 LYGKD-LKERVRIDMYADGTQDLMM 25
>d1oe8a1 a.45.1.1 (A:85-207) Class alpha GST {Blood fluke
(Schistosoma haematobium) [TaxId: 6185]}
Length = 123
Score = 26.5 bits (58), Expect = 0.27
Identities = 2/19 (10%), Positives = 8/19 (42%)
Query: 44 PEMDMKIDMIVDTIDDMRQ 62
E ++ ++ +D+
Sbjct: 5 EEEYYNVEKLIGQAEDLEH 23
>d1gsua1 a.45.1.1 (A:85-217) Class mu GST {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 133
Score = 26.5 bits (58), Expect = 0.27
Identities = 4/26 (15%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Query: 38 LYGMDGPEMDMKIDMIVDTIDDMRQG 63
+ G ++D++ + + D+R
Sbjct: 1 MCGET-EVEKQRVDVLENHLMDLRMA 25
>d1gula1 a.45.1.1 (A:81-220) Class alpha GST {Human (Homo
sapiens), (a1-1) [TaxId: 9606]}
Length = 140
Score = 26.2 bits (57), Expect = 0.32
Identities = 7/25 (28%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Query: 38 LYGMDGPEMDMKIDMIVDTIDDMRQ 62
L+G + + IDM V+ D+ +
Sbjct: 1 LFGKN-LKERTLIDMYVEGTLDLLE 24
>d2fhea1 a.45.1.1 (A:81-216) Class alpha GST {Fasciola hepatica
[TaxId: 6192]}
Length = 136
Score = 25.7 bits (56), Expect = 0.50
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 49 KIDMIVDTIDDMRQG 63
++ MI D+RQG
Sbjct: 10 RVSMIEGAAVDLRQG 24
>d1tu7a1 a.45.1.1 (A:78-208) Class pi GST {Onchocerca volvulus
[TaxId: 6282]}
Length = 131
Score = 25.8 bits (56), Expect = 0.51
Identities = 4/19 (21%), Positives = 7/19 (36%)
Query: 44 PEMDMKIDMIVDTIDDMRQ 62
IDM + + D+
Sbjct: 4 EMETTYIDMFCEGVRDLHV 22
>d1duga1 a.45.1.1 (A:81-220) Class alpha GST {Schistosoma
japonicum [TaxId: 6182]}
Length = 140
Score = 25.7 bits (56), Expect = 0.60
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 44 PEMDMKIDMIVDTIDDMRQG 63
P+ +I M+ + D+R G
Sbjct: 5 PKERAEISMLEGAVLDIRYG 24
>d1v2aa2 c.47.1.5 (A:1-83) Class delta GST {Mosquito (Anopheles
dirus b), isozyme 1-6 [TaxId: 123217]}
Length = 83
Score = 25.1 bits (54), Expect = 0.67
Identities = 9/33 (27%), Positives = 12/33 (36%)
Query: 5 NHYPFGKVPCIEINGVQYHQSRAIGRYLARQAG 37
P +P + NG +S AI YL
Sbjct: 44 KLNPQHTIPTLVDNGHVVWESYAIVLYLVETYA 76
>d1gwca2 c.47.1.5 (A:4-86) Class tau GST {Aegilops tauschii, also
known as Triticum tauschii [TaxId: 37682]}
Length = 83
Score = 25.1 bits (54), Expect = 0.67
Identities = 9/39 (23%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Query: 6 HYPFGKVPCIEINGVQYHQSRAIGRYLARQAGLYGMDGP 44
+ K+P + NG +S I +Y+ ++ GP
Sbjct: 47 NPVHKKIPVLIHNGAPVCESMIILQYIDE---VFASTGP 82
>d1ljra2 c.47.1.5 (A:1-79) Class theta GST {Human (Homo sapiens)
[TaxId: 9606]}
Length = 79
Score = 24.2 bits (52), Expect = 1.3
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 5 NHYPFGKVPCIEINGVQYHQSRAIGRYLARQ 35
GK+P ++ +S AI YL+ +
Sbjct: 47 QINSLGKLPTLKDGDFILTESSAILIYLSCK 77
>d2aeba1 c.42.1.1 (A:5-313) Arginase {Human (Homo sapiens) [TaxId:
9606]}
Length = 309
Score = 22.9 bits (48), Expect = 5.8
Identities = 6/42 (14%), Positives = 15/42 (35%)
Query: 1 MTTVNHYPFGKVPCIEINGVQYHQSRAIGRYLARQAGLYGMD 42
+ ++ + G+ Y + I + + L G+D
Sbjct: 229 VDGLDPSFTPATGTPVVGGLTYREGLYITEEIYKTGLLSGLD 270
>d1jqoa_ c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Escherichia
coli [TaxId: 562]}
Length = 936
Score = 23.2 bits (49), Expect = 5.9
Identities = 5/69 (7%), Positives = 20/69 (28%), Gaps = 10/69 (14%)
Query: 15 IEINGVQYHQSRAIGRY----------LARQAGLYGMDGPEMDMKIDMIVDTIDDMRQGK 64
+ + + G Y + L G + + + + + D++
Sbjct: 482 GAFHVLAELPPDSFGPYIISMATAPSDVLAVELLQRECGVRQPLPVVPLFERLADLQSAP 541
Query: 65 DIIQSYRTL 73
++ ++
Sbjct: 542 ASVERLFSV 550
>d1f2ea2 c.47.1.5 (A:1-80) Class beta GST {Sphingomonas
paucimobilis [TaxId: 13689]}
Length = 80
Score = 22.3 bits (47), Expect = 6.6
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 6 HYPFGKVPCIEINGVQY-HQSRAIGRYLARQ 35
P GKVP + ++ + ++ AI Y+A Q
Sbjct: 46 VNPSGKVPALTLDSGETLTENPAILLYIADQ 76
>d1t6aa_ d.129.8.1 (A:) Rbstp2229 protein {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 124
Score = 22.5 bits (48), Expect = 7.2
Identities = 8/23 (34%), Positives = 15/23 (65%), Gaps = 3/23 (13%)
Query: 56 TIDDMRQGKDIIQSYRTLLSQTG 78
TI+D+ K +++ Y+ L +TG
Sbjct: 15 TIEDV---KQLLERYQMALKKTG 34
>d2qgma1 c.150.1.3 (A:33-445) Succinoglycan biosynthesis protein
BC3205 {Bacillus cereus [TaxId: 1396]}
Length = 413
Score = 22.6 bits (48), Expect = 8.0
Identities = 9/51 (17%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Query: 33 ARQAGLYGMDGPEMDMK-IDMIVDTID--DMRQGKDIIQSYRTLLSQTGGP 80
++ G+D +D + ++D + ++ ++Y+ L S TG
Sbjct: 130 KKKIQFIGLDLKALDQGSFNKVIDYVRLHRPDLLAEVEENYKELSSFTGSI 180
>d1k0da2 c.47.1.5 (A:109-200) Yeast prion protein ure2p, nitrogen
regulation fragment {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 92
Score = 22.0 bits (46), Expect = 8.8
Identities = 4/33 (12%), Positives = 12/33 (36%)
Query: 5 NHYPFGKVPCIEINGVQYHQSRAIGRYLARQAG 37
+ + ++ + +S AI +L +
Sbjct: 53 PNARVPALIDHGMDNLSIWESGAILLHLVNKYY 85
>d1woha_ c.42.1.1 (A:) Agmatinase {Deinococcus radiodurans [TaxId:
1299]}
Length = 303
Score = 22.6 bits (47), Expect = 9.0
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 13 PCIEINGVQYHQSRAIGRYLARQAGLYGMD 42
E +G+ Y Q I A + G+D
Sbjct: 240 SSPEPDGLTYAQGMKILAAAAANNTVVGLD 269
>d1jqna_ c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Escherichia
coli [TaxId: 562]}
Length = 880
Score = 22.4 bits (47), Expect = 9.3
Identities = 7/33 (21%), Positives = 14/33 (42%)
Query: 38 LYGMDGPEMDMKIDMIVDTIDDMRQGKDIIQSY 70
L G M + + +T+DD+ D++
Sbjct: 486 LLKEAGIGFAMPVAPLFETLDDLNNANDVMTQL 518
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.140 0.419
Gapped
Lambda K H
0.267 0.0508 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 310,334
Number of extensions: 12638
Number of successful extensions: 83
Number of sequences better than 10.0: 1
Number of HSP's gapped: 83
Number of HSP's successfully gapped: 60
Length of query: 81
Length of database: 2,407,596
Length adjustment: 47
Effective length of query: 34
Effective length of database: 1,762,286
Effective search space: 59917724
Effective search space used: 59917724
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.4 bits)