BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9896
(145 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O60841|IF2P_HUMAN Eukaryotic translation initiation factor 5B OS=Homo sapiens
GN=EIF5B PE=1 SV=4
Length = 1220
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/138 (59%), Positives = 104/138 (75%)
Query: 8 IQYCQTFLKKRLMFKNELQATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIV 67
++ QT L KRL EL+A V+EVKA+PG+GTTID IL+NG L EGDT+++ G +GPIV
Sbjct: 839 VELTQTMLSKRLAHCEELRAQVMEVKALPGMGTTIDVILINGRLKEGDTIIVPGVEGPIV 898
Query: 68 TQIRSLLMPQPMQELRVKNAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEIDD 127
TQIR LL+P PM+ELRVKN Y ++K+++ QGVKI KDLEKT+AGL L VA +DEI
Sbjct: 899 TQIRGLLLPPPMKELRVKNQYEKHKEVEAAQGVKILGKDLEKTLAGLPLLVAYKEDEIPV 958
Query: 128 LCDEVARELKSALSTIKL 145
L DE+ ELK L+ IKL
Sbjct: 959 LKDELIHELKQTLNAIKL 976
>sp|Q5RDE1|IF2P_PONAB Eukaryotic translation initiation factor 5B OS=Pongo abelii
GN=EIF5B PE=2 SV=2
Length = 1220
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/138 (59%), Positives = 104/138 (75%)
Query: 8 IQYCQTFLKKRLMFKNELQATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIV 67
++ QT L KRL EL+A V+EVKA+PG+GTTID IL+NG L EGDT+++ G +GPIV
Sbjct: 839 VELTQTMLSKRLAHCEELRAQVMEVKALPGMGTTIDVILINGRLKEGDTIIVPGVEGPIV 898
Query: 68 TQIRSLLMPQPMQELRVKNAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEIDD 127
TQIR LL+P PM+ELRVKN Y ++K+++ QGVKI KDLEKT+AGL L VA +DEI
Sbjct: 899 TQIRGLLLPPPMKELRVKNQYEKHKEVEAAQGVKILGKDLEKTLAGLPLLVAYKEDEIPV 958
Query: 128 LCDEVARELKSALSTIKL 145
L DE+ ELK L+ IKL
Sbjct: 959 LKDELIHELKQTLNAIKL 976
>sp|Q05D44|IF2P_MOUSE Eukaryotic translation initiation factor 5B OS=Mus musculus
GN=Eif5b PE=1 SV=2
Length = 1216
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 82/138 (59%), Positives = 103/138 (74%)
Query: 8 IQYCQTFLKKRLMFKNELQATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIV 67
++ QT L KRL EL+A V+EVKA+PG+GTTID IL+NG L EGDT+++ G +GPIV
Sbjct: 835 VELTQTMLSKRLAHCEELRAQVMEVKALPGMGTTIDVILINGRLKEGDTIIVPGVEGPIV 894
Query: 68 TQIRSLLMPQPMQELRVKNAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEIDD 127
TQIR LL+P PM+ELRVKN Y ++K+++ QGVKI KDLEKT+AGL L VA DEI
Sbjct: 895 TQIRGLLLPPPMKELRVKNQYEKHKEVEAAQGVKILGKDLEKTLAGLPLLVAYKDDEIPV 954
Query: 128 LCDEVARELKSALSTIKL 145
L DE+ ELK L+ IKL
Sbjct: 955 LKDELIHELKQTLNAIKL 972
>sp|B2GUV7|IF2P_RAT Eukaryotic translation initiation factor 5B OS=Rattus norvegicus
GN=Eif5b PE=1 SV=1
Length = 1216
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 82/138 (59%), Positives = 103/138 (74%)
Query: 8 IQYCQTFLKKRLMFKNELQATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIV 67
++ QT L KRL EL+A V+EVKA+PG+GTTID IL+NG L EGDT+++ G +GPIV
Sbjct: 835 VELTQTMLSKRLAHCEELRAQVMEVKALPGMGTTIDVILINGRLKEGDTIIVPGVEGPIV 894
Query: 68 TQIRSLLMPQPMQELRVKNAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEIDD 127
TQIR LL+P PM+ELRVKN Y ++K+++ QGVKI KDLEKT+AGL L VA DEI
Sbjct: 895 TQIRGLLLPPPMKELRVKNQYEKHKEVEAAQGVKILGKDLEKTLAGLPLLVAYKDDEIPV 954
Query: 128 LCDEVARELKSALSTIKL 145
L DE+ ELK L+ IKL
Sbjct: 955 LKDELIHELKQTLNAIKL 972
>sp|Q54XP6|IF2P_DICDI Eukaryotic translation initiation factor 5B OS=Dictyostelium
discoideum GN=eif5b PE=3 SV=1
Length = 1045
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 90/136 (66%)
Query: 8 IQYCQTFLKKRLMFKNELQATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIV 67
IQ Q + ++ F N+LQ T+LEVK I G GTTID +LVNGTL EGD +V++G +GPI
Sbjct: 668 IQLMQKLMLDKVEFTNQLQCTLLEVKVIEGFGTTIDVVLVNGTLNEGDKIVVSGFNGPIE 727
Query: 68 TQIRSLLMPQPMQELRVKNAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEIDD 127
T IRSLL P P++E RVK+ ++ +K I+ G+KI A LEK + G +L V D+I+
Sbjct: 728 TSIRSLLTPPPLRESRVKSQFINHKSIRAAMGIKIVAPGLEKAVPGTSLHVVGPNDDIEK 787
Query: 128 LCDEVARELKSALSTI 143
+ E RE+ S L+ +
Sbjct: 788 IRAEAKREVDSVLNDV 803
>sp|Q10251|IF2P_SCHPO Eukaryotic translation initiation factor 5B OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC56F8.03 PE=1 SV=1
Length = 1079
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 78/111 (70%)
Query: 8 IQYCQTFLKKRLMFKNELQATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIV 67
I QT + R+ + L+ TVLEVK I GLG TID IL NG L+EGD +VL G GPI+
Sbjct: 692 ISLTQTRMSDRIKYITTLECTVLEVKVIEGLGATIDVILSNGVLHEGDRIVLCGMGGPII 751
Query: 68 TQIRSLLMPQPMQELRVKNAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRV 118
T +R+LL PQP++E+RVK+AYV +K+IK GVKI A DLEK +AG L V
Sbjct: 752 TTVRALLTPQPLKEMRVKSAYVHHKEIKAAMGVKICANDLEKAVAGSRLLV 802
>sp|P39730|IF2P_YEAST Eukaryotic translation initiation factor 5B OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=FUN12 PE=1
SV=2
Length = 1002
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 80/107 (74%)
Query: 12 QTFLKKRLMFKNELQATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVTQIR 71
Q + K+LM+ + ++AT+LEVK + G GTTID IL NG L EGD +VL G +GPIVT IR
Sbjct: 617 QKRMSKQLMYLSHVEATILEVKVVEGFGTTIDVILSNGYLREGDRIVLCGMNGPIVTNIR 676
Query: 72 SLLMPQPMQELRVKNAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRV 118
+LL PQP++ELR+K+ YV +K++K GVKIAA DLEK ++G L V
Sbjct: 677 ALLTPQPLRELRLKSEYVHHKEVKAALGVKIAANDLEKAVSGSRLLV 723
>sp|A3DMS0|IF2P_STAMF Probable translation initiation factor IF-2 OS=Staphylothermus
marinus (strain ATCC 43588 / DSM 3639 / F1) GN=infB PE=3
SV=1
Length = 606
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 85/130 (65%), Gaps = 2/130 (1%)
Query: 11 CQTFLKKRLMFKNE-LQATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVTQ 69
Q F+KKRL+ E + VLEVK PGLGTTID I+ +G + GDT+V+ G D PIVT+
Sbjct: 225 VQRFMKKRLVTSEEPAKGVVLEVKEEPGLGTTIDVIIYDGVIRRGDTIVVGGKDKPIVTK 284
Query: 70 IRSLLMPQPMQELRVKNA-YVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEIDDL 128
+R+LLMP+P+Q++R +V +++ GVKI+A DL+ +AG + V +D+I++
Sbjct: 285 VRALLMPRPLQDMRAHEGKFVSVEQVVAATGVKISAPDLDNALAGSPIFVVPSEDKIEEY 344
Query: 129 CDEVARELKS 138
V E++S
Sbjct: 345 IKIVKEEIES 354
>sp|A2BJZ8|IF2P_HYPBU Probable translation initiation factor IF-2 OS=Hyperthermus
butylicus (strain DSM 5456 / JCM 9403) GN=infB PE=3 SV=1
Length = 612
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 84/130 (64%), Gaps = 2/130 (1%)
Query: 11 CQTFLKKRLMF-KNELQATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVTQ 69
Q +L+ RL F + + +LE++ PGLGT D ++ +G L +GD +V G +GP++T
Sbjct: 225 TQRYLQHRLRFAEGPAKGVILEIREQPGLGTAADVVIYDGVLRKGDIIVTGGLNGPVITH 284
Query: 70 IRSLLMPQPMQELRVKNAYVE-YKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEIDDL 128
+R+LLMP+P+QE+RV +E +++ GV+I A LE+ IAG + VA+D+ E L
Sbjct: 285 VRALLMPKPLQEIRVAKRELEPVEEVYAAAGVRIVAPGLEEAIAGAPVFVARDEGEAKQL 344
Query: 129 CDEVARELKS 138
++V RE+++
Sbjct: 345 AEKVRREIEA 354
>sp|A8A8D3|IF2P_IGNH4 Probable translation initiation factor IF-2 OS=Ignicoccus
hospitalis (strain KIN4/I / DSM 18386 / JCM 14125)
GN=infB PE=3 SV=1
Length = 609
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 85/131 (64%), Gaps = 1/131 (0%)
Query: 11 CQTFLKKRLMF-KNELQATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVTQ 69
Q ++K RL + + + ++EVK PG G+TIDTI+ +G + +GDT+V+ G +GPIVT+
Sbjct: 226 AQRYMKGRLKYVEGPAKGVIMEVKEEPGYGSTIDTIIYDGIIRQGDTIVVGGIEGPIVTK 285
Query: 70 IRSLLMPQPMQELRVKNAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEIDDLC 129
+R+LL+P P+ E+R + +++ GVKI A LEK +AG + V +++++L
Sbjct: 286 VRALLVPAPLTEMRATKRFEPVEEVSAAAGVKIVAPGLEKAVAGAPVYVVDSPEKLEELK 345
Query: 130 DEVARELKSAL 140
++V RE++ +
Sbjct: 346 EQVKREVEEVM 356
>sp|Q9Y9B3|IF2P_AERPE Probable translation initiation factor IF-2 OS=Aeropyrum pernix
(strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138
/ K1) GN=infB PE=3 SV=1
Length = 617
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 11 CQTFLKKRLMF-KNELQATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVTQ 69
QT+LK+RL + + + VLEVK + G GT +D ++ +G L + D +V+ G +GPIVT+
Sbjct: 227 TQTYLKERLRYAEGPAKGVVLEVKEMQGFGTVVDAVIYDGVLKKEDIIVVGGREGPIVTR 286
Query: 70 IRSLLMPQPMQELRVKNA-YVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEIDDL 128
+R+LLMP P+Q++R + A +V+ ++ GV+IAA L+ IAG + A+ ++E L
Sbjct: 287 VRALLMPAPLQDIRSREARFVQVDRVYAAAGVRIAAPGLDDVIAGSPIYAAESEEEARKL 346
Query: 129 CDEVARELK 137
+ V RE++
Sbjct: 347 MEAVQREIE 355
>sp|Q0W8X2|IF2P_UNCMA Probable translation initiation factor IF-2 OS=Uncultured
methanogenic archaeon RC-I GN=infB PE=3 SV=1
Length = 594
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 84/134 (62%), Gaps = 3/134 (2%)
Query: 8 IQYCQTFLKKRLMFK--NELQATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGP 65
I Q FL++ L F+ T+LEVK GLG TIDTI+ +G + GDT+V+ G + P
Sbjct: 218 IGLAQRFLEESLKFQVTGPGVGTILEVKEERGLGYTIDTIIYDGEIRVGDTIVIGGREKP 277
Query: 66 IVTQIRSLLMPQPMQELRVKNAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEI 125
T++R+LL P+P +E+RV+ + K+ GVKI A +LEK +AG +RV K+ + +
Sbjct: 278 YSTKVRALLKPKPNREIRVEERFDRVNKVTAASGVKILAPELEKAMAGSQVRVTKESN-V 336
Query: 126 DDLCDEVARELKSA 139
+D+ E+ +E++ A
Sbjct: 337 EDIIKEIEQEMEQA 350
>sp|B9LQL7|IF2P_HALLT Probable translation initiation factor IF-2 OS=Halorubrum
lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 /
ACAM 34) GN=infB PE=3 SV=1
Length = 597
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 74/114 (64%), Gaps = 2/114 (1%)
Query: 11 CQTFLKKRLMF--KNELQATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVT 68
Q F+K+ + + + TVLEVK G G TIDT++ +G + GD +V+ G D PIVT
Sbjct: 221 SQRFMKEEMAIDVQGPGEGTVLEVKDERGFGATIDTVVYDGVVRNGDQIVVGGQDEPIVT 280
Query: 69 QIRSLLMPQPMQELRVKNAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQ 122
+IR+LL P+P++E+R + + + ++ GVKIAA DL++ +AG +RV +D+
Sbjct: 281 EIRALLQPRPLEEIRTEKKFEKVAEVGAAAGVKIAAPDLDRAMAGAPVRVVRDR 334
>sp|Q466D5|IF2P_METBF Probable translation initiation factor IF-2 OS=Methanosarcina
barkeri (strain Fusaro / DSM 804) GN=infB PE=3 SV=1
Length = 591
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 80/128 (62%), Gaps = 3/128 (2%)
Query: 11 CQTFLKKRLMF--KNELQATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVT 68
Q FL+ L + K TVLEVK GLG T+D IL +GTL +GDTVV+ PI T
Sbjct: 218 AQKFLEANLHYSAKGPGVGTVLEVKEEKGLGATLDVILYDGTLKKGDTVVIGSLGKPIQT 277
Query: 69 QIRSLLMPQPMQELRVKNAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEIDDL 128
++R+LL P+ + E+R ++ + + K+ GVKI+A LE +AG +RVA ++D +D++
Sbjct: 278 KVRALLKPRELSEMRYESKFKQVNKVTAAVGVKISAPGLEGALAGSPIRVA-NEDTLDEI 336
Query: 129 CDEVAREL 136
D++ E+
Sbjct: 337 VDQIKSEI 344
>sp|Q976A1|IF2P_SULTO Probable translation initiation factor IF-2 OS=Sulfolobus tokodaii
(strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) GN=infB
PE=3 SV=1
Length = 602
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 84/130 (64%), Gaps = 2/130 (1%)
Query: 11 CQTFLKKRLMF-KNELQATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVTQ 69
Q ++K +L F + + +LEVK + GLG TID I+ +G L + DT+++ G +GPIVT+
Sbjct: 223 TQNYMKTKLRFAEGPAKGVILEVKELQGLGYTIDVIIYDGILKKNDTIIIGGLNGPIVTK 282
Query: 70 IRSLLMPQPMQELR-VKNAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEIDDL 128
+RS+L+P+P+Q+++ VK + ++ GVKI A +LE +AG L VA+++ +I++
Sbjct: 283 VRSILVPKPLQDIKVVKTDLTQIDEVYAAAGVKIYAPELENALAGSPLFVAENEQQIEEY 342
Query: 129 CDEVARELKS 138
+ E+ S
Sbjct: 343 KKIIQEEIAS 352
>sp|Q5UXU6|IF2P_HALMA Probable translation initiation factor IF-2 OS=Haloarcula
marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 /
VKM B-1809) GN=infB PE=3 SV=1
Length = 601
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 65/97 (67%)
Query: 27 ATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVTQIRSLLMPQPMQELRVKN 86
TVLEVK G GTT+D I+ +GT+ DT+V+ G GPI+T +R+LL P+P++E+R +
Sbjct: 243 GTVLEVKDTQGFGTTLDAIIYDGTIRNDDTIVVGGLQGPIITDVRALLRPRPLEEIRTEQ 302
Query: 87 AYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQD 123
+ + ++ GVKIAA +L +AG +RV +D+D
Sbjct: 303 EFEQVDEVAAADGVKIAAPELGDAMAGAPIRVIRDRD 339
>sp|Q8U1R8|IF2P_PYRFU Probable translation initiation factor IF-2 OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=infB
PE=3 SV=1
Length = 984
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 87/139 (62%), Gaps = 4/139 (2%)
Query: 11 CQTFLKKRLMFKNE--LQATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVT 68
Q +L++RL + E + T+LEV+ PGLG TID I+ GTL++ DT+V+ G D IVT
Sbjct: 604 SQKYLEERLKIEVEGPARGTILEVREEPGLGHTIDVIIYEGTLHKDDTIVVGGKDKAIVT 663
Query: 69 QIRSLLMPQPMQELRVKNAYVEY-KKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEIDD 127
++R+LL P+P+ E+R +Y ++ GVKIAA LE+ +AG + A + ++
Sbjct: 664 KVRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEEALAGSPVIAAPTPEAVEK 723
Query: 128 LCDEVARELKS-ALSTIKL 145
+E+ R+++S +ST K+
Sbjct: 724 AKEEIMRQIQSVVISTDKM 742
>sp|A2STM8|IF2P_METLZ Probable translation initiation factor IF-2 OS=Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=infB
PE=3 SV=1
Length = 589
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 77/118 (65%), Gaps = 1/118 (0%)
Query: 27 ATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVTQIRSLLMPQPMQELRVKN 86
TVLEVK GLGTT+D IL +G + GD + +AG+DG + T++R+LL P+PM+E+ +++
Sbjct: 233 GTVLEVKEEKGLGTTLDVILYDGIISVGDEIGIAGSDGALSTKVRALLQPRPMKEILIED 292
Query: 87 AYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAK-DQDEIDDLCDEVARELKSALSTI 143
++ K + GVKI+A +LE +AG +RV + D DE+ +E +E+ LS +
Sbjct: 293 QFMRVKSVVAAAGVKISAPNLESIVAGSPIRVIRGDHDEVLAKINEEMQEINIKLSDV 350
>sp|O58822|IF2P_PYRHO Probable translation initiation factor IF-2 OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=infB PE=3 SV=1
Length = 1044
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 85/133 (63%), Gaps = 3/133 (2%)
Query: 11 CQTFLKKRLMFKNE--LQATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVT 68
Q +L+++L + E + T+LEV+ PGLG TID I+ +GTL++ DT+V+ G D IVT
Sbjct: 664 SQKYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTLHKDDTIVVGGKDKAIVT 723
Query: 69 QIRSLLMPQPMQELRVKNAYVEY-KKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEIDD 127
++R+LL P+P+ E+R +Y ++ GVKIAA LE+ +AG + A ++++
Sbjct: 724 KVRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEEALAGSPVIAAPTPEDVER 783
Query: 128 LCDEVARELKSAL 140
+E+ R+++S +
Sbjct: 784 AKEEIMRQIESVV 796
>sp|Q8PU78|IF2P_METMA Probable translation initiation factor IF-2 OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=infB PE=3 SV=1
Length = 591
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 82/137 (59%), Gaps = 7/137 (5%)
Query: 11 CQTFLKKRLMF--KNELQATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVT 68
Q FL+ L + K TVLEVK GLG T+D IL +GTL +GDTVV+ PI T
Sbjct: 218 AQKFLEANLQYSAKGPGVGTVLEVKEEKGLGATLDIILYDGTLKKGDTVVIGSLGEPIRT 277
Query: 69 QIRSLLMPQPMQELRVKNAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEIDDL 128
++R+LL P+ + E+R ++ + + K+ GVKI+A LE +AG +RVA +D
Sbjct: 278 KVRALLKPRELSEIRYESKFQQVSKVTAAAGVKISAPGLEGALAGSPIRVA-----TEDN 332
Query: 129 CDEVARELKSALSTIKL 145
+E+A ++KS + +++
Sbjct: 333 LEEIASQVKSEIDEVRI 349
>sp|A0B8Q6|IF2P_METTP Probable translation initiation factor IF-2 OS=Methanosaeta
thermophila (strain DSM 6194 / PT) GN=infB PE=3 SV=1
Length = 602
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 84/137 (61%), Gaps = 6/137 (4%)
Query: 11 CQTFLKKRLMFKNELQA--TVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVT 68
Q FLK+ L+ ++ T+LEVK GLGTT+D IL +G + GDT+V+ PI+T
Sbjct: 228 AQRFLKQNLVIESSRPGMGTILEVKEERGLGTTLDVILYDGMISVGDTIVVGTPREPIIT 287
Query: 69 QIRSLLMPQPMQELRVKNAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEIDDL 128
++R+LL P+P++E+R + + K + G+K++A LE +AG +RV + ++
Sbjct: 288 KVRALLKPRPLKEIRSEERFTPVKHVVAASGIKVSAPKLETALAGSTIRVVGEGED---- 343
Query: 129 CDEVARELKSALSTIKL 145
+ +A+E++S + +++
Sbjct: 344 PEAIAKEIRSEIEAVRI 360
>sp|Q18FT0|IF2P_HALWD Probable translation initiation factor IF-2 OS=Haloquadratum
walsbyi (strain DSM 16790) GN=infB PE=3 SV=3
Length = 620
Score = 90.5 bits (223), Expect = 3e-18, Method: Composition-based stats.
Identities = 47/110 (42%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 27 ATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVTQIRSLLMPQPMQELRVKN 86
T+LEVK G G T+D +L +G++ D +V+ GTDGPIVT +R+LL P+P E+R +N
Sbjct: 262 GTILEVKDERGFGATVDVVLYDGSVRPDDIIVVGGTDGPIVTDVRALLQPRPNAEIRTEN 321
Query: 87 AYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEIDDLCDEVAREL 136
+ + + GVKIAA DL+ +AG LRV +++D ++ EV EL
Sbjct: 322 RFDRVEIAQAAAGVKIAAPDLDNAMAGAPLRVVRNRDRA-NVVSEVEAEL 370
>sp|C6A1V3|IF2P_THESM Probable translation initiation factor IF-2 OS=Thermococcus
sibiricus (strain MM 739 / DSM 12597) GN=infB PE=3 SV=1
Length = 597
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 84/133 (63%), Gaps = 3/133 (2%)
Query: 11 CQTFLKKRLMFKNE--LQATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVT 68
Q +L+++L + E + T+LEV+ G GTTID I+ +GTL + DT+V+ G D IVT
Sbjct: 217 AQKYLEEKLKIEVEGPARGTILEVREEIGFGTTIDVIIYDGTLRKDDTIVVGGKDKAIVT 276
Query: 69 QIRSLLMPQPMQELR-VKNAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEIDD 127
+IR+LL P+P+ E+R + + ++ + G+KIAA DLE+ +AG + +D++E+
Sbjct: 277 KIRALLKPKPLDEIRDPRYKFDHVNEVSASAGIKIAAPDLEEALAGSPVIAVRDEEELKR 336
Query: 128 LCDEVARELKSAL 140
E+ ++KS +
Sbjct: 337 ARREILEQIKSVI 349
>sp|P95691|IF2P_SULAC Probable translation initiation factor IF-2 OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=infB PE=3 SV=2
Length = 602
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 79/118 (66%), Gaps = 2/118 (1%)
Query: 11 CQTFLKKRLMF-KNELQATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVTQ 69
Q ++K +L F + + +LEVK + GLG T D ++ G L + D +VLAG DGPIVT+
Sbjct: 222 TQNYMKNKLKFAEGPAKGVILEVKELQGLGYTADVVIYEGILRKNDIIVLAGIDGPIVTK 281
Query: 70 IRSLLMPQPMQELRV-KNAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEID 126
+R++L+P+P+Q++++ K+ + ++ GVK+ A++LE +AG + VA++ +E++
Sbjct: 282 VRAILVPRPLQDIKLAKSDLAQIDEVYAASGVKVYAQNLETALAGSPIYVAENNEEVE 339
>sp|A4YCQ5|IF2P_METS5 Probable translation initiation factor IF-2 OS=Metallosphaera
sedula (strain ATCC 51363 / DSM 5348) GN=infB PE=3 SV=1
Length = 597
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 79/128 (61%), Gaps = 2/128 (1%)
Query: 11 CQTFLKKRL-MFKNELQATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVTQ 69
Q +LK RL + + +LEVK GLG TID I+ +G L + DT+VL G +G IVT+
Sbjct: 221 TQQYLKTRLRAVEGPAKGVILEVKEEQGLGHTIDVIIYDGILRKSDTIVLGGINGVIVTK 280
Query: 70 IRSLLMPQPMQELRV-KNAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEIDDL 128
IR++L+P P+Q++R+ ++ Y +I GVKI+A LE+ +AG L VA D+ ++ +
Sbjct: 281 IRNILLPAPLQDMRMTRSGYRSIDEISAAAGVKISAPGLEEALAGSPLYVANDEAKLQEA 340
Query: 129 CDEVAREL 136
+ EL
Sbjct: 341 RKLIEEEL 348
>sp|B6YWH3|IF2P_THEON Probable translation initiation factor IF-2 OS=Thermococcus
onnurineus (strain NA1) GN=infB PE=3 SV=1
Length = 597
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 86/133 (64%), Gaps = 3/133 (2%)
Query: 11 CQTFLKKRLMFKNE--LQATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVT 68
Q +L+++L + E + T+LEV+ GLGTTID I+ +GTL++ DT+V+ G D IVT
Sbjct: 217 SQKYLEEKLKIEVEGPARGTILEVREEIGLGTTIDVIIYDGTLHKDDTIVVGGKDKAIVT 276
Query: 69 QIRSLLMPQPMQELR-VKNAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEIDD 127
+IR+LL P+P+ E+R + + + ++ GVKIAA LE+ +AG + A+ ++E++
Sbjct: 277 KIRALLKPKPLDEIRDPRFRFDQVDEVTAAAGVKIAAPGLEEALAGSPVIAARSEEEVEK 336
Query: 128 LCDEVARELKSAL 140
E+ +++S +
Sbjct: 337 AKQEILSQIQSVV 349
>sp|A7IAP7|IF2P_METB6 Probable translation initiation factor IF-2 OS=Methanoregula boonei
(strain 6A8) GN=infB PE=3 SV=1
Length = 591
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 78/132 (59%), Gaps = 4/132 (3%)
Query: 8 IQYCQTFLKKRLMFKNEL--QATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGP 65
I Q ++ + L E + TVLEVK GLGTT+D IL NGTL GD + +A D
Sbjct: 213 IGLAQRYMGEELKLSAEGPGEGTVLEVKEERGLGTTLDVILYNGTLSVGDEIAMASQDDV 272
Query: 66 IVTQIRSLLMPQPMQELRVKNAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEI 125
+ T++RSLL P+PM+E+ +++ + K + G+K++A LEK IAG L V + +
Sbjct: 273 VTTKVRSLLKPRPMKEILIEDRFERVKSVVAASGIKVSAPGLEKVIAGSPLFVTRGN--M 330
Query: 126 DDLCDEVARELK 137
D+L + +E++
Sbjct: 331 DELAARIRKEMQ 342
>sp|Q5JGR9|IF2P_PYRKO Probable translation initiation factor IF-2 OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=infB PE=3 SV=1
Length = 1144
Score = 88.6 bits (218), Expect = 1e-17, Method: Composition-based stats.
Identities = 50/132 (37%), Positives = 85/132 (64%), Gaps = 3/132 (2%)
Query: 12 QTFLKKRLMFKNE--LQATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVTQ 69
Q +L+++L + E + T+LEV+ GLGTTID I+ +GTL + DT+V+ G D IVT+
Sbjct: 765 QKYLEEKLKIEVEGPARGTILEVREEVGLGTTIDVIIYDGTLRKDDTIVVGGKDKAIVTK 824
Query: 70 IRSLLMPQPMQELR-VKNAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEIDDL 128
IR+LL P+P+ E+R + + + ++ GVKIAA LE+ +AG + A+ ++EI+
Sbjct: 825 IRALLKPKPLDEIRDPRFRFDQVDEVTAAAGVKIAAPGLEEALAGSPVIAARSEEEIEKA 884
Query: 129 CDEVARELKSAL 140
E+ +++S +
Sbjct: 885 KQEILSQIQSVV 896
>sp|Q8TV06|IF2P_METKA Probable translation initiation factor IF-2 OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=infB PE=3 SV=1
Length = 598
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 72/110 (65%), Gaps = 3/110 (2%)
Query: 11 CQTFLKKRLMFKNEL--QATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVT 68
Q FL+++L + E +A +LEVK PGLG T+D IL +G + GDT+V+ + PIVT
Sbjct: 221 AQRFLEEQLKIEVEGPGKAAILEVKEEPGLGHTVDAILYDGIIRTGDTIVIGHPEEPIVT 280
Query: 69 QIRSLLMPQPMQELR-VKNAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLR 117
++RSLL P+P+ E+R + + + ++ GVKI+A +LE+ +AG LR
Sbjct: 281 RVRSLLKPKPLDEMRDPSDRFRKVDEVTAAAGVKISAPELEEAVAGAPLR 330
>sp|Q8TQL5|IF2P_METAC Probable translation initiation factor IF-2 OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=infB PE=3 SV=1
Length = 597
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 81/137 (59%), Gaps = 7/137 (5%)
Query: 11 CQTFLKKRLMF--KNELQATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVT 68
Q FL+ L + KN TVLEVK GLG T+D IL +GTL +GDTVV+ PI T
Sbjct: 224 AQKFLEANLQYSAKNPGVGTVLEVKEEKGLGATLDVILYDGTLKKGDTVVIGSLGEPIQT 283
Query: 69 QIRSLLMPQPMQELRVKNAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEIDDL 128
++R+LL P+ + E+R ++ + + ++ GVKI+A L+ +AG +RVA ++
Sbjct: 284 KVRALLKPRELSEIRYESKFKQVSEVTAAAGVKISAPGLDGALAGSPIRVATEE-----T 338
Query: 129 CDEVARELKSALSTIKL 145
E+ ++KS + +++
Sbjct: 339 LGEIVAQVKSEIDEVRI 355
>sp|Q9HNQ2|IF2P_HALSA Probable translation initiation factor IF-2 OS=Halobacterium
salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
GN=infB PE=3 SV=1
Length = 600
Score = 87.0 bits (214), Expect = 4e-17, Method: Composition-based stats.
Identities = 47/110 (42%), Positives = 68/110 (61%), Gaps = 1/110 (0%)
Query: 27 ATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVTQIRSLLMPQPMQELRVKN 86
TVLEVK G GTT+D IL +GT+ GDTVV+ PIVT +R+LL P + E+R +
Sbjct: 242 GTVLEVKDEQGFGTTVDVILYDGTIRSGDTVVVGAQPEPIVTDVRALLKPGDLAEMRTEK 301
Query: 87 AYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEIDDLCDEVAREL 136
+ +++ G+K+AA DL+ +AG +RV D+D + D+ EV EL
Sbjct: 302 RFGNVDRMQAAAGLKVAAPDLDDAMAGAPIRVVGDRD-VADVVTEVEAEL 350
>sp|B0R6U5|IF2P_HALS3 Probable translation initiation factor IF-2 OS=Halobacterium
salinarum (strain ATCC 29341 / DSM 671 / R1) GN=infB
PE=3 SV=1
Length = 600
Score = 87.0 bits (214), Expect = 4e-17, Method: Composition-based stats.
Identities = 47/110 (42%), Positives = 68/110 (61%), Gaps = 1/110 (0%)
Query: 27 ATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVTQIRSLLMPQPMQELRVKN 86
TVLEVK G GTT+D IL +GT+ GDTVV+ PIVT +R+LL P + E+R +
Sbjct: 242 GTVLEVKDEQGFGTTVDVILYDGTIRSGDTVVVGAQPEPIVTDVRALLKPGDLAEMRTEK 301
Query: 87 AYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEIDDLCDEVAREL 136
+ +++ G+K+AA DL+ +AG +RV D+D + D+ EV EL
Sbjct: 302 RFGNVDRMQAAAGLKVAAPDLDDAMAGAPIRVVGDRD-VADVVTEVEAEL 350
>sp|Q9UZK7|IF2P_PYRAB Probable translation initiation factor IF-2 OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=infB PE=3 SV=1
Length = 992
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 86/139 (61%), Gaps = 4/139 (2%)
Query: 11 CQTFLKKRLMFKNE--LQATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVT 68
Q +L+++L + E + T+LEV+ PGLG TID I+ +GTL++ DT+V+ G D IVT
Sbjct: 612 SQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTLHKDDTIVVGGKDKAIVT 671
Query: 69 QIRSLLMPQPMQELRVKNAYVEY-KKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEIDD 127
+IR+LL P+P+ E+R +Y ++ GVKIAA LE+ +AG + A ++++
Sbjct: 672 KIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEEALAGSPVIAAPTPEDVEK 731
Query: 128 LCDEVAREL-KSALSTIKL 145
E+ ++ + +ST K+
Sbjct: 732 AKQEILEQIERVVISTDKV 750
>sp|Q2FU48|IF2P_METHJ Probable translation initiation factor IF-2 OS=Methanospirillum
hungatei (strain JF-1 / DSM 864) GN=infB PE=3 SV=1
Length = 604
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 74/117 (63%), Gaps = 1/117 (0%)
Query: 26 QATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVTQIRSLLMPQPMQELRVK 85
TVLEVK GLG TID IL +GT+ GD + +A T+G T++RSLL P+PMQE+ V+
Sbjct: 245 SGTVLEVKEEKGLGATIDVILFDGTIRVGDEIAIATTEGVQTTKVRSLLQPRPMQEILVE 304
Query: 86 NAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRV-AKDQDEIDDLCDEVARELKSALS 141
+ ++ K++ GVK++A L++ IAG +RV +D +E+ + E+ +LS
Sbjct: 305 DRFLRVKEVVAAAGVKVSAPGLDQVIAGSPVRVIGEDPEEVKTSIAKEMTEINVSLS 361
>sp|B1YCQ7|IF2P_PYRNV Probable translation initiation factor IF-2 OS=Pyrobaculum
neutrophilum (strain DSM 2338 / JCM 9278 / V24Sta)
GN=infB PE=3 SV=1
Length = 589
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 68/112 (60%), Gaps = 1/112 (0%)
Query: 26 QATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVTQIRSLLMPQPMQELR-V 84
+ V+EVK GLG D IL +G L +GDTVV AG DGP V ++R L+MP+P++E+R
Sbjct: 235 RGVVMEVKEERGLGVVADAILYDGVLKKGDTVVTAGIDGPRVAKVRMLVMPKPLEEMRDP 294
Query: 85 KNAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEIDDLCDEVAREL 136
++ Y+ +++K GV+I A LE +AG L +D E+ + V E+
Sbjct: 295 EDRYMAVEEVKAAAGVRIVADGLEGVVAGAPLMAVRDPGEVQEAVKVVGEEI 346
>sp|A3CSP4|IF2P_METMJ Probable translation initiation factor IF-2 OS=Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=infB
PE=3 SV=1
Length = 593
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 70/111 (63%), Gaps = 1/111 (0%)
Query: 27 ATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVTQIRSLLMPQPMQELRVKN 86
TVLEVK GLG T+D IL +GTL GD +V+AG D I T++RSLL P+PM E+ ++
Sbjct: 235 GTVLEVKEERGLGMTLDLILYDGTLKVGDEIVVAGNDQIIETKVRSLLKPRPMSEILIEE 294
Query: 87 AYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEIDDLCDEVARELK 137
+ K + G+K+AA L+ IAG LR + + D++ ++V RE++
Sbjct: 295 RFERVKSVTAAAGIKVAAPKLDGVIAGSPLRAVRSGNR-DEVIEQVRREVQ 344
>sp|O29490|IF2P_ARCFU Probable translation initiation factor IF-2 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=infB PE=3 SV=1
Length = 595
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 66/105 (62%), Gaps = 2/105 (1%)
Query: 11 CQTFLKK--RLMFKNELQATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVT 68
Q +L+K RL + + + TVLEVK GLG T D IL +GTL GD + +AG D IVT
Sbjct: 221 AQRYLEKNLRLHIEGKGRGTVLEVKEERGLGVTCDAILYDGTLKVGDRIAIAGKDEVIVT 280
Query: 69 QIRSLLMPQPMQELRVKNAYVEYKKIKGTQGVKIAAKDLEKTIAG 113
++++L P P++E+RV++ + K + G+KI A +LE +AG
Sbjct: 281 NVKAILKPPPVREMRVESKFQSVKSVTAAAGIKIVAPNLENVLAG 325
>sp|A6VIS4|IF2P_METM7 Probable translation initiation factor IF-2 OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=infB PE=3
SV=1
Length = 598
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 80/130 (61%), Gaps = 4/130 (3%)
Query: 11 CQTFLKKRLMFKNE--LQATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVT 68
Q FL+++L E + TVLE+K GLG TID I+ +G GD +V+ DG +VT
Sbjct: 218 AQKFLEQKLALNVEGYAKGTVLELKEEKGLGKTIDAIIYDGIAKTGDFLVVGNPDGVLVT 277
Query: 69 QIRSLLMPQPMQELR-VKNAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEIDD 127
+I++LL P+ + E+R K+ + K+I GVKI+A DL+ IAG LR+ +D++D
Sbjct: 278 KIKALLKPKELDEMRDPKDKFKPSKQISAATGVKISAPDLDNVIAGSPLRIVP-KDQVDA 336
Query: 128 LCDEVARELK 137
+EV +E++
Sbjct: 337 AKEEVLQEVE 346
>sp|Q12Z93|IF2P_METBU Probable translation initiation factor IF-2 OS=Methanococcoides
burtonii (strain DSM 6242) GN=infB PE=3 SV=1
Length = 591
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 79/129 (61%), Gaps = 3/129 (2%)
Query: 11 CQTFLKKRLMFKNELQA--TVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVT 68
Q FL+ L + E TVLEVK GLGTT+D IL +G L +GDT+V+ PI T
Sbjct: 218 AQRFLESNLHYNAEGPGVGTVLEVKEERGLGTTLDLILYDGVLKKGDTIVVGCLGEPIQT 277
Query: 69 QIRSLLMPQPMQELRVKNAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEIDDL 128
++R++L P+ + E+ V++ + + K+ GVKI+A L+ ++G ++RVA + +D +
Sbjct: 278 KVRAVLKPRALSEINVEDKFKQVSKVTAAVGVKISAPHLDGALSGGSVRVAT-AETLDAV 336
Query: 129 CDEVARELK 137
+EV E++
Sbjct: 337 VEEVRNEIE 345
>sp|A4FZQ3|IF2P_METM5 Probable translation initiation factor IF-2 OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=infB PE=3
SV=1
Length = 598
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 80/130 (61%), Gaps = 4/130 (3%)
Query: 11 CQTFLKKRLMFKNE--LQATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVT 68
Q FL+++L E + TVLE+K GLG TID I+ +G GD +V+ DG IV+
Sbjct: 218 AQKFLEQKLALNVEGYAKGTVLELKEEKGLGKTIDAIIYDGIAKTGDFLVVGNPDGVIVS 277
Query: 69 QIRSLLMPQPMQELR-VKNAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEIDD 127
+I++LL P+ + E+R K+ + K+I GVKI+A DL+ IAG LR+ ++++D
Sbjct: 278 KIKALLKPKELDEMRDPKDKFKPSKQISAATGVKISAPDLDSVIAGSPLRIVP-KNQVDA 336
Query: 128 LCDEVARELK 137
+EV +E++
Sbjct: 337 AKEEVLQEVE 346
>sp|A8MBV9|IF2P_CALMQ Probable translation initiation factor IF-2 OS=Caldivirga
maquilingensis (strain ATCC 700844 / DSMZ 13496 / JCM
10307 / IC-167) GN=infB PE=3 SV=1
Length = 594
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 77/130 (59%), Gaps = 4/130 (3%)
Query: 11 CQTFLKKRL-MFKNELQATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVTQ 69
Q +K RL + + V+EVK GLGTT+D +L +G + +GDT+V G +GP+VT+
Sbjct: 220 TQRLVKDRLRLVGGPGKGVVMEVKEEKGLGTTMDVVLYDGVMRKGDTIVAMGLNGPVVTR 279
Query: 70 IRSLLMPQPMQELR-VKNAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEIDDL 128
IR ++MP+P+ E+R ++ Y+ +++ GVK+ A L+ + G ++ V Q +
Sbjct: 280 IRMMVMPKPLDEMRDPEDKYMHINEVEAAAGVKVIADGLDDVVPGSSVYVV--QGDPKPY 337
Query: 129 CDEVARELKS 138
DEV ++ S
Sbjct: 338 IDEVVKDAAS 347
>sp|A1RXH6|IF2P_THEPD Probable translation initiation factor IF-2 OS=Thermofilum pendens
(strain Hrk 5) GN=infB PE=3 SV=1
Length = 601
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 74/128 (57%), Gaps = 2/128 (1%)
Query: 11 CQTFLKKRLMFK-NELQATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVTQ 69
Q +LK RL+ + +LE+K GLG T IL +G + GD VV G +G T+
Sbjct: 223 AQRYLKGRLLASIAPGKGVILELKEEAGLGMTATLILYDGVIRRGDIVVTGGIEGAFSTR 282
Query: 70 IRSLLMPQPMQELRV-KNAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEIDDL 128
+R+LLMP+P+ E+R ++ ++E ++I GVK+ A+ LEK + G L VA ++E+ L
Sbjct: 283 VRALLMPKPLDEMRSPEDRFLEVERIVAAAGVKLVAEGLEKAVPGAPLFVAVSEEEVGRL 342
Query: 129 CDEVAREL 136
V E+
Sbjct: 343 KQLVEEEI 350
>sp|A9A813|IF2P_METM6 Probable translation initiation factor IF-2 OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=infB PE=3
SV=1
Length = 598
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 79/130 (60%), Gaps = 4/130 (3%)
Query: 11 CQTFLKKRLMFKNE--LQATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVT 68
Q FL+++L E + TVLE+K GLG TID I+ +G GD +V+ G +V+
Sbjct: 218 AQKFLEQKLALNVEGYAKGTVLELKEEKGLGKTIDAIIYDGIAKTGDFLVVGNPQGVLVS 277
Query: 69 QIRSLLMPQPMQELR-VKNAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEIDD 127
+I++LL P+ + E+R K+ + K+I GVKI+A DL+ IAG LR+ +D+I++
Sbjct: 278 KIKALLKPKELDEMRDPKDKFKPSKQISAATGVKISAPDLDNVIAGSPLRIVP-KDQIEN 336
Query: 128 LCDEVARELK 137
EV +E++
Sbjct: 337 AKAEVLQEVE 346
>sp|Q57710|IF2P_METJA Probable translation initiation factor IF-2 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=infB PE=3 SV=1
Length = 1155
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 72/118 (61%), Gaps = 4/118 (3%)
Query: 11 CQTFLKKRLMFKNE--LQATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVT 68
Q FL+ RL E + T+LEVK GLGTTID I+ +G GD +V+ D +VT
Sbjct: 776 AQKFLEDRLKLNVEGYAKGTILEVKEEKGLGTTIDAIIYDGIAKRGDYLVVGLPDDVLVT 835
Query: 69 QIRSLLMPQPMQELR-VKNAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLR-VAKDQDE 124
++++LL P+P+ E+R ++ + ++ GVKIAA +L+K IAG +R V KD+ E
Sbjct: 836 RVKALLKPKPLDEMRDPRDKFKPVNEVTAAAGVKIAAPELDKVIAGCPIRIVPKDKIE 893
>sp|Q6M0I6|IF2P_METMP Probable translation initiation factor IF-2 OS=Methanococcus
maripaludis (strain S2 / LL) GN=infB PE=3 SV=1
Length = 598
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 72/118 (61%), Gaps = 4/118 (3%)
Query: 11 CQTFLKKRLMFKNE--LQATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVT 68
Q FL+++L E + TVLE+K GLG TID I+ +G GD +V+ DG +V+
Sbjct: 218 AQRFLEQKLALNVEGYAKGTVLELKEEKGLGKTIDAIIYDGIAKTGDFLVVGNPDGVLVS 277
Query: 69 QIRSLLMPQPMQELR-VKNAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLR-VAKDQDE 124
+I++LL P+ + E+R K+ + K+I GVKI+A DL+ IAG LR V K+Q E
Sbjct: 278 KIKALLKPKELDEMRDPKDKFKPSKQISAATGVKISAPDLDSVIAGSPLRIVPKNQVE 335
>sp|Q8ZX20|IF2P_PYRAE Probable translation initiation factor IF-2 OS=Pyrobaculum
aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM
9630 / NBRC 100827) GN=infB PE=3 SV=1
Length = 589
Score = 77.4 bits (189), Expect = 3e-14, Method: Composition-based stats.
Identities = 41/112 (36%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
Query: 26 QATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVTQIRSLLMPQPMQELR-V 84
+ V+EVK GLG D IL +GTL +GD +V A +GP ++R L+MP+P++E+R
Sbjct: 236 KGVVMEVKEERGLGVVADVILYDGTLRKGDVLVTASLEGPKEARVRMLIMPKPLEEMRDP 295
Query: 85 KNAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEIDDLCDEVAREL 136
++ ++ +++K GV++ A LE +AG L D EI + C+ V E+
Sbjct: 296 EDKFMAVEEVKAAAGVRVVADGLEGVVAGSPLIAVWDPREIPNACNLVKEEI 347
>sp|A1RUX2|IF2P_PYRIL Probable translation initiation factor IF-2 OS=Pyrobaculum
islandicum (strain DSM 4184 / JCM 9189) GN=infB PE=3
SV=1
Length = 588
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Query: 26 QATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVTQIRSLLMPQPMQELR-V 84
+ V+EVK GLG D IL +G L +GD ++ AG DGP T++R L+MP+P+ E+R
Sbjct: 235 KGVVMEVKEERGLGVVADVILYDGVLKKGDVIITAGIDGPKETKVRMLIMPKPLDEMRDP 294
Query: 85 KNAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQDEIDDLCDEVAREL 136
++ Y+ +++K GV+I A L+ +AG + D +I + V E+
Sbjct: 295 EDRYMAVEEVKAAAGVRIVADGLDGVVAGAPIFAVWDLQDIQKVVQLVREEI 346
>sp|A6URS1|IF2P_METVS Probable translation initiation factor IF-2 OS=Methanococcus
vannielii (strain SB / ATCC 35089 / DSM 1224) GN=infB
PE=3 SV=1
Length = 598
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 67/111 (60%), Gaps = 3/111 (2%)
Query: 11 CQTFLKKRLMFKNE--LQATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVT 68
Q FL+++L E + TVLEVK GLG TID I+ +G GD +V+ DG + +
Sbjct: 218 AQKFLEQKLALNVEGYAKGTVLEVKEEKGLGRTIDAIIYDGIARTGDYIVIGNPDGIVTS 277
Query: 69 QIRSLLMPQPMQELR-VKNAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRV 118
++++LL P+ + E+R K+ + ++I GVKI+A +LE ++G LR+
Sbjct: 278 KVKALLKPKELDEMRDPKDKFKPSREISAATGVKISAPELEMVVSGSPLRI 328
>sp|Q3IMS5|IF2P_NATPD Probable translation initiation factor IF-2 OS=Natronomonas
pharaonis (strain DSM 2160 / ATCC 35678) GN=infB PE=3
SV=1
Length = 602
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 63/96 (65%)
Query: 27 ATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVTQIRSLLMPQPMQELRVKN 86
TVLEVK G GTT+D +L +GT+ DT+V+ G + IVT +R+LL PQP+ E+R +
Sbjct: 244 GTVLEVKEERGFGTTLDIVLYDGTIRADDTIVVGGKNETIVTDVRALLQPQPLAEIRTEK 303
Query: 87 AYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRVAKDQ 122
+ + + + G+KIAA DL+ +AG +RV +D+
Sbjct: 304 QFEQVEAVGAAAGIKIAAPDLDDAMAGAPVRVVRDR 339
>sp|A6UVG0|IF2P_META3 Probable translation initiation factor IF-2 OS=Methanococcus
aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=infB PE=3
SV=1
Length = 598
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 11 CQTFLKKRLMFKNE--LQATVLEVKAIPGLGTTIDTILVNGTLYEGDTVVLAGTDGPIVT 68
Q F+++ L E + TVLEVK GLG T+D I+ +G GD +V+ DG +V+
Sbjct: 218 AQRFMEQNLKLNVEGYAKGTVLEVKEERGLGKTMDAIIYDGVAKRGDYIVIGNPDGIVVS 277
Query: 69 QIRSLLMPQPMQELR-VKNAYVEYKKIKGTQGVKIAAKDLEKTIAGLNLRV 118
+I++LL P+ + E+R ++ + +I G+KI+A DL+ IAG LR+
Sbjct: 278 RIKALLKPKALDEMRDPRDKFKTMNEISAATGLKISAPDLDNIIAGSPLRI 328
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,621,323
Number of Sequences: 539616
Number of extensions: 1782318
Number of successful extensions: 9737
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 9516
Number of HSP's gapped (non-prelim): 243
length of query: 145
length of database: 191,569,459
effective HSP length: 106
effective length of query: 39
effective length of database: 134,370,163
effective search space: 5240436357
effective search space used: 5240436357
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)