Query psy9898
Match_columns 82
No_of_seqs 98 out of 100
Neff 4.3
Searched_HMMs 29240
Date Fri Aug 16 22:26:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9898.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9898hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3u4t_A TPR repeat-containing p 79.3 2.9 9.8E-05 26.9 4.3 50 8-60 202-251 (272)
2 4gcn_A Protein STI-1; structur 77.7 1.9 6.4E-05 26.1 2.8 33 24-59 5-37 (127)
3 3edt_B KLC 2, kinesin light ch 73.0 5.4 0.00018 25.2 4.2 54 4-60 20-73 (283)
4 3ffl_A Anaphase-promoting comp 65.2 13 0.00043 26.0 5.1 40 19-61 54-94 (167)
5 2x6h_A GH13170P, VPS34, phosph 63.8 8 0.00027 32.2 4.4 29 10-41 96-124 (696)
6 3ro3_A PINS homolog, G-protein 63.4 7.6 0.00026 22.0 3.1 32 25-59 7-38 (164)
7 1klx_A Cysteine rich protein B 61.7 4.1 0.00014 25.2 1.9 32 28-59 94-126 (138)
8 3edt_B KLC 2, kinesin light ch 61.1 18 0.00063 22.6 4.9 36 22-60 80-115 (283)
9 3bee_A Putative YFRE protein; 60.6 4.9 0.00017 24.0 2.0 29 27-58 43-71 (93)
10 3ulq_A Response regulator aspa 59.9 17 0.00057 25.1 4.9 48 10-62 324-371 (383)
11 4gco_A Protein STI-1; structur 59.7 7.7 0.00026 23.3 2.8 32 25-59 11-42 (126)
12 3ls8_A Phosphatidylinositol 3- 59.7 5 0.00017 33.1 2.5 29 10-41 82-110 (614)
13 4gpm_A Engineered protein OR26 56.2 4 0.00014 26.5 1.1 17 2-18 10-26 (169)
14 1n0q_A 3ANK, 3 ankyrin repeats 54.5 6.4 0.00022 22.1 1.7 17 2-18 8-24 (93)
15 1xnf_A Lipoprotein NLPI; TPR, 53.7 32 0.0011 21.6 5.2 44 13-59 29-72 (275)
16 4gcn_A Protein STI-1; structur 53.1 33 0.0011 20.3 5.3 35 22-59 78-112 (127)
17 1na3_A Designed protein CTPR2; 52.4 9.1 0.00031 20.2 2.1 29 28-59 44-72 (91)
18 2l6j_A TPR repeat-containing p 51.1 13 0.00046 20.2 2.7 28 28-58 5-32 (111)
19 3nf1_A KLC 1, kinesin light ch 50.6 24 0.00081 22.6 4.2 36 22-60 64-99 (311)
20 4g8k_A 2-5A-dependent ribonucl 50.5 7.1 0.00024 26.9 1.7 17 2-18 65-81 (337)
21 3upv_A Heat shock protein STI1 50.1 13 0.00045 21.3 2.7 15 45-59 53-67 (126)
22 3ma5_A Tetratricopeptide repea 50.0 10 0.00035 21.6 2.2 31 27-60 41-71 (100)
23 3zqo_A Terminase small subunit 48.9 7.9 0.00027 23.4 1.6 14 21-34 57-70 (72)
24 3q15_A PSP28, response regulat 48.2 28 0.00097 24.0 4.6 47 10-60 166-212 (378)
25 3k9i_A BH0479 protein; putativ 47.8 19 0.00065 20.6 3.1 34 23-59 23-56 (117)
26 3vtx_A MAMA; tetratricopeptide 47.7 12 0.0004 22.8 2.3 30 27-59 141-170 (184)
27 1a17_A Serine/threonine protei 47.5 13 0.00046 21.6 2.4 32 24-58 10-41 (166)
28 1elr_A TPR2A-domain of HOP; HO 47.4 16 0.00055 20.0 2.7 16 45-60 53-68 (131)
29 3nf1_A KLC 1, kinesin light ch 47.3 34 0.0012 21.8 4.6 35 23-60 107-141 (311)
30 3ro2_A PINS homolog, G-protein 47.3 38 0.0013 21.5 4.8 36 21-59 37-72 (338)
31 3rjv_A Putative SEL1 repeat pr 47.1 14 0.00047 24.0 2.6 33 27-59 125-158 (212)
32 2jab_A H10-2-G3; HER2, darpin, 46.4 9.7 0.00033 22.7 1.7 17 2-18 20-36 (136)
33 3sz7_A HSC70 cochaperone (SGT) 46.3 16 0.00053 22.1 2.7 32 25-59 9-40 (164)
34 3q15_A PSP28, response regulat 46.3 36 0.0012 23.5 4.9 47 10-61 321-367 (378)
35 4ga2_A E3 SUMO-protein ligase 45.8 14 0.00046 22.7 2.3 30 27-59 65-94 (150)
36 2dba_A Smooth muscle cell asso 45.0 20 0.00067 20.4 2.8 34 23-59 61-94 (148)
37 2zgd_A 3 repeat synthetic anky 44.7 11 0.00037 22.0 1.7 17 2-18 63-79 (110)
38 3rkv_A Putative peptidylprolyl 44.6 17 0.00059 21.9 2.7 34 23-59 7-40 (162)
39 3jxi_A Vanilloid receptor-rela 44.3 8.6 0.0003 25.2 1.3 18 2-19 231-248 (260)
40 3aaa_C Myotrophin, protein V-1 44.0 11 0.00039 21.9 1.7 17 2-18 79-95 (123)
41 3sf4_A G-protein-signaling mod 43.9 43 0.0015 22.3 4.8 37 21-60 41-77 (406)
42 2vyi_A SGTA protein; chaperone 43.8 26 0.00088 19.1 3.1 14 45-58 61-74 (131)
43 3gw4_A Uncharacterized protein 43.4 52 0.0018 19.7 5.2 37 22-61 142-178 (203)
44 2aja_A Ankyrin repeat family p 42.3 11 0.00037 28.0 1.7 18 2-19 134-151 (376)
45 3ulq_A Response regulator aspa 42.2 56 0.0019 22.4 5.3 35 23-60 180-214 (383)
46 2rfa_A Transient receptor pote 42.1 10 0.00034 24.4 1.3 18 2-19 203-220 (232)
47 2y1l_E Darpin-8.4; hydrolase-i 41.8 12 0.00042 23.0 1.7 17 2-18 20-36 (169)
48 3u3w_A Transcriptional activat 41.2 65 0.0022 21.4 5.4 50 8-61 178-227 (293)
49 1n0r_A 4ANK, 4 ankyrin repeats 40.9 14 0.00046 21.0 1.7 17 2-18 74-90 (126)
50 1faf_A Large T antigen; J doma 39.9 31 0.0011 20.3 3.2 29 21-51 5-35 (79)
51 1elw_A TPR1-domain of HOP; HOP 39.8 19 0.00066 19.3 2.1 15 45-59 53-67 (118)
52 3rjp_A COVR; winged helix-turn 39.4 56 0.0019 19.0 5.3 47 8-58 27-75 (96)
53 2wxf_A Phosphatidylinositol-4, 39.3 22 0.00074 30.6 3.3 29 10-41 459-487 (940)
54 1d9s_A Cyclin-dependent kinase 39.2 15 0.0005 21.9 1.7 17 2-18 84-100 (136)
55 2l6b_A NR1C; ankyrin, consensu 38.8 14 0.00048 21.2 1.5 16 3-18 82-97 (115)
56 1bd8_A P19INK4D CDK4/6 inhibit 38.7 15 0.00051 22.0 1.7 17 2-18 74-90 (156)
57 3c5r_A BARD-1, BRCA1-associate 38.3 15 0.00052 21.7 1.7 17 2-18 49-65 (137)
58 2fbn_A 70 kDa peptidylprolyl i 38.2 27 0.00093 21.7 2.9 34 24-60 35-68 (198)
59 2kc7_A BFR218_protein; tetratr 37.9 19 0.00066 19.6 2.0 28 29-59 37-64 (99)
60 1hxi_A PEX5, peroxisome target 37.6 22 0.00076 21.0 2.3 30 27-59 51-80 (121)
61 2aja_A Ankyrin repeat family p 37.6 14 0.00048 27.3 1.7 16 3-18 170-185 (376)
62 2lni_A Stress-induced-phosphop 37.0 33 0.0011 18.9 2.9 30 27-59 50-79 (133)
63 2etb_A Transient receptor pote 37.0 13 0.00045 24.3 1.3 18 2-19 227-244 (256)
64 3twr_A Tankyrase-2; ankyrin re 36.9 16 0.00056 22.1 1.7 17 2-18 48-64 (165)
65 3q49_B STIP1 homology and U bo 36.7 24 0.00083 20.0 2.3 28 28-58 10-37 (137)
66 2kat_A Uncharacterized protein 36.6 24 0.00084 19.9 2.3 30 27-59 19-48 (115)
67 1bi7_B P16INK4A, MTS1, multipl 36.3 17 0.00058 22.2 1.7 17 2-18 18-34 (156)
68 3ehr_A Osteoclast-stimulating 36.0 20 0.00067 23.1 2.0 16 3-18 113-128 (222)
69 4b93_B Ankyrin repeat domain-c 35.8 13 0.00043 25.6 1.1 18 2-19 17-34 (269)
70 1ihb_A P18-INK4C(INK6), cyclin 35.5 15 0.00051 22.1 1.3 16 3-18 110-125 (162)
71 1oy3_D Transcription factor in 35.4 17 0.00059 23.6 1.7 17 2-18 51-67 (282)
72 2ifu_A Gamma-SNAP; membrane fu 35.4 99 0.0034 20.8 5.6 34 23-60 112-145 (307)
73 4a1s_A PINS, partner of inscut 35.4 57 0.0019 22.1 4.4 35 22-59 81-115 (411)
74 3uq3_A Heat shock protein STI1 35.3 31 0.0011 21.3 2.8 29 29-60 40-68 (258)
75 1awc_B Protein (GA binding pro 35.2 18 0.00062 21.8 1.7 17 2-18 40-56 (153)
76 1qqe_A Vesicular transport pro 35.2 83 0.0028 21.1 5.2 35 23-60 113-148 (292)
77 3hra_A Ankyrin repeat family p 35.2 18 0.00062 22.5 1.7 17 2-18 45-61 (201)
78 3v30_A DNA-binding protein rfx 35.0 15 0.00052 22.5 1.3 17 2-18 42-58 (172)
79 2y3a_A Phosphatidylinositol-4, 35.0 29 0.00098 30.5 3.4 29 10-41 612-640 (1092)
80 3hhm_A Phosphatidylinositol-4, 34.5 37 0.0013 29.9 4.0 38 10-53 605-642 (1091)
81 4a1s_A PINS, partner of inscut 34.3 74 0.0025 21.5 4.8 36 22-60 338-373 (411)
82 2hwv_A DNA-binding response re 34.0 85 0.0029 19.5 5.4 46 9-58 49-96 (121)
83 1opc_A OMPR, OMPRC; transcript 33.8 77 0.0026 18.9 4.7 46 9-58 37-84 (110)
84 2f8y_A Notch homolog 1, transl 33.5 20 0.00067 22.7 1.7 17 2-18 31-47 (223)
85 3deo_A Signal recognition part 33.3 20 0.00069 22.5 1.7 17 2-18 82-98 (183)
86 3v31_A Ankyrin repeat family A 33.3 20 0.00069 21.8 1.7 17 2-18 42-58 (167)
87 3utm_A Tankyrase-1; tankyrase, 33.1 19 0.00066 24.1 1.7 17 2-18 97-113 (351)
88 2pnn_A Transient receptor pote 33.1 16 0.00056 24.2 1.3 18 2-19 239-256 (273)
89 1gxq_A PHOB, phosphate regulon 32.8 79 0.0027 18.7 5.2 46 9-58 37-84 (106)
90 1sw6_A Regulatory protein SWI6 32.7 19 0.00066 25.1 1.7 17 2-18 137-153 (327)
91 3b7b_A Euchromatic histone-lys 32.6 21 0.00071 22.8 1.7 17 2-18 17-33 (237)
92 3f6q_A Integrin-linked protein 32.6 21 0.00071 22.1 1.7 17 2-18 78-94 (179)
93 2v5f_A Prolyl 4-hydroxylase su 32.4 33 0.0011 19.9 2.5 34 24-60 43-76 (104)
94 1pc2_A Mitochondria fission pr 32.4 64 0.0022 21.7 4.2 35 22-59 66-100 (152)
95 2z9m_A Response regulator YYCF 32.2 88 0.003 19.1 4.8 47 8-58 41-89 (120)
96 1na0_A Designed protein CTPR3; 32.1 30 0.001 18.6 2.1 29 28-59 44-72 (125)
97 3q9v_A DNA-binding response re 32.0 88 0.003 19.9 4.7 46 9-58 66-113 (133)
98 3cqc_B Nuclear pore complex pr 31.8 36 0.0012 24.3 3.0 50 9-61 100-152 (227)
99 1wdy_A 2-5A-dependent ribonucl 31.6 22 0.00074 22.9 1.7 17 2-18 45-61 (285)
100 2gw1_A Mitochondrial precursor 31.1 39 0.0013 23.5 3.0 34 23-59 2-35 (514)
101 1s70_B 130 kDa myosin-binding 31.0 22 0.00076 23.6 1.7 17 2-18 79-95 (299)
102 2kck_A TPR repeat; tetratricop 31.0 35 0.0012 18.1 2.3 30 27-59 40-69 (112)
103 3ui2_A Signal recognition part 30.9 22 0.00077 23.6 1.7 17 2-18 83-99 (244)
104 3aji_A 26S proteasome non-ATPa 30.9 23 0.00079 22.5 1.7 17 2-18 46-62 (231)
105 3zqp_A Terminase small subunit 30.7 21 0.00072 24.8 1.6 21 21-41 124-147 (164)
106 2pmu_A Response regulator PHOP 30.7 90 0.0031 18.7 5.5 46 9-58 40-87 (110)
107 3zq7_A KDP operon transcriptio 30.4 80 0.0027 18.5 4.0 47 8-58 33-81 (102)
108 1ycs_B 53BP2, P53BP2; ankyrin 29.7 24 0.00082 23.2 1.7 17 2-18 109-125 (239)
109 3qww_A SET and MYND domain-con 29.7 85 0.0029 23.8 4.9 38 22-62 335-372 (433)
110 1k1a_A B-cell lymphoma 3-encod 29.6 25 0.00085 22.3 1.7 17 2-18 52-68 (241)
111 2nug_A Ribonuclease III, RNAse 29.2 37 0.0013 23.3 2.6 33 23-57 102-135 (221)
112 2zxj_A Transcriptional regulat 29.1 1.1E+02 0.0038 19.3 5.6 46 9-58 42-89 (120)
113 2e2e_A Formate-dependent nitri 29.0 37 0.0013 20.5 2.3 31 27-60 44-74 (177)
114 3u3w_A Transcriptional activat 28.7 1.3E+02 0.0044 19.9 5.7 32 27-61 115-146 (293)
115 2k4j_A Putative transcriptiona 28.3 87 0.003 19.2 4.1 46 9-58 47-94 (115)
116 2cp9_A EF-TS, EF-TSMT, elongat 28.3 96 0.0033 18.3 4.7 38 10-56 11-48 (64)
117 2rfm_A Putative ankyrin repeat 28.1 28 0.00095 21.7 1.7 17 2-18 140-156 (192)
118 1tr8_A Conserved protein (MTH1 28.1 37 0.0013 21.7 2.3 34 10-52 67-100 (102)
119 1wj7_A Hypothetical protein (R 28.0 92 0.0031 20.2 4.2 41 8-57 39-79 (104)
120 3eu9_A Huntingtin-interacting 27.9 28 0.00096 21.8 1.7 17 2-18 48-64 (240)
121 1qqe_A Vesicular transport pro 27.8 1.3E+02 0.0045 20.0 5.2 36 22-60 72-107 (292)
122 2hqn_A Putative transcriptiona 27.7 81 0.0028 18.7 3.8 46 9-58 35-82 (109)
123 1n11_A Ankyrin; clathrin, BAND 27.7 27 0.00091 24.8 1.7 17 2-18 20-36 (437)
124 2dzn_A Probable 26S proteasome 27.6 28 0.00097 21.9 1.7 17 2-18 42-58 (228)
125 3n71_A Histone lysine methyltr 27.5 95 0.0033 23.9 4.9 38 22-62 346-383 (490)
126 2vge_A RELA-associated inhibit 27.3 28 0.00097 23.1 1.7 17 2-18 60-76 (229)
127 3ljn_A Hypothetical protein; a 27.3 28 0.00095 24.1 1.7 17 2-18 26-42 (364)
128 1zt2_B DNA primase large subun 27.1 18 0.00061 25.6 0.7 37 45-81 171-211 (212)
129 2xcb_A PCRH, regulatory protei 26.6 44 0.0015 19.7 2.3 30 27-59 52-81 (142)
130 1ikn_D Protein (I-kappa-B-alph 26.4 30 0.001 22.2 1.6 17 2-18 157-173 (236)
131 4hbd_A KN motif and ankyrin re 26.2 38 0.0013 23.0 2.2 16 3-18 190-205 (276)
132 1ouv_A Conserved hypothetical 26.2 41 0.0014 21.8 2.3 30 27-59 74-107 (273)
133 1yyh_A HN1;, notch 1, ankyrin 26.2 30 0.001 22.7 1.7 17 2-18 63-79 (253)
134 2jzy_A Transcriptional regulat 26.0 99 0.0034 18.7 4.0 46 9-58 34-81 (112)
135 2xai_A ASB-9, ankyrin repeat a 25.1 33 0.0011 22.7 1.7 17 2-18 9-25 (261)
136 3ieg_A DNAJ homolog subfamily 25.1 1.4E+02 0.0047 19.2 4.7 35 22-59 267-301 (359)
137 1e7u_A Phosphatidylinositol 3- 24.7 19 0.00066 31.0 0.6 16 26-41 483-498 (961)
138 2qfc_A PLCR protein; TPR, HTH, 24.6 1.6E+02 0.0053 19.5 5.4 35 24-61 193-227 (293)
139 3as5_A MAMA; tetratricopeptide 24.1 75 0.0026 18.2 3.0 30 28-60 145-174 (186)
140 3kf8_A Protein STN1; OB fold; 23.6 51 0.0017 23.9 2.6 18 44-61 187-204 (220)
141 3qwp_A SET and MYND domain-con 23.5 1.2E+02 0.004 22.7 4.7 51 9-62 353-403 (429)
142 1dcq_A PYK2-associated protein 23.3 36 0.0012 23.5 1.7 17 2-18 211-227 (278)
143 3d9h_A CDNA FLJ77766, highly s 23.2 37 0.0013 23.0 1.7 17 2-18 98-114 (285)
144 1zu2_A Mitochondrial import re 23.2 33 0.0011 23.1 1.4 35 26-60 79-121 (158)
145 2if4_A ATFKBP42; FKBP-like, al 23.1 66 0.0023 22.5 3.1 33 24-59 176-208 (338)
146 2fo1_E LIN-12 protein; beta-ba 23.0 37 0.0013 24.0 1.7 17 2-18 172-188 (373)
147 3urz_A Uncharacterized protein 22.8 45 0.0015 21.2 2.0 30 27-59 88-117 (208)
148 3gyz_A Chaperone protein IPGC; 22.8 54 0.0018 20.6 2.3 31 27-60 70-100 (151)
149 3qww_A SET and MYND domain-con 22.6 1.2E+02 0.0042 22.9 4.7 50 10-62 365-414 (433)
150 2xev_A YBGF; tetratricopeptide 22.3 68 0.0023 17.8 2.5 30 27-59 39-68 (129)
151 4gyw_A UDP-N-acetylglucosamine 22.1 42 0.0014 27.1 2.1 30 27-59 9-38 (723)
152 3k4t_A Virion-associated prote 22.0 57 0.002 21.1 2.3 13 24-36 22-35 (95)
153 1wr1_B Ubiquitin-like protein 21.9 86 0.0029 17.9 2.9 29 25-55 19-55 (58)
154 2ho1_A Type 4 fimbrial biogene 21.8 40 0.0014 21.1 1.5 35 22-59 32-66 (252)
155 3n71_A Histone lysine methyltr 21.6 1.3E+02 0.0045 23.1 4.7 50 10-62 376-425 (490)
156 1hh8_A P67PHOX, NCF-2, neutrop 21.6 53 0.0018 20.1 2.0 32 26-60 120-151 (213)
157 2fo7_A Synthetic consensus TPR 21.4 84 0.0029 16.7 2.7 28 28-58 104-131 (136)
158 1sb0_B Protein C-MYB; CREB-bin 21.3 41 0.0014 17.0 1.2 12 23-34 1-12 (26)
159 3kea_A K1L; tropism, ANK repea 21.2 42 0.0015 22.7 1.7 17 2-18 37-53 (285)
160 1vqu_A Anthranilate phosphorib 20.7 31 0.001 26.3 0.9 67 5-71 152-222 (374)
161 1p5q_A FKBP52, FK506-binding p 20.5 67 0.0023 22.4 2.6 34 24-60 144-177 (336)
162 2dna_A Unnamed protein product 20.5 1E+02 0.0035 18.3 3.1 29 26-56 22-58 (67)
163 4i17_A Hypothetical protein; T 20.4 65 0.0022 20.1 2.3 31 26-59 75-105 (228)
164 1o17_A Anthranilate PRT, anthr 20.4 32 0.0011 25.9 1.0 66 5-70 115-184 (345)
No 1
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=79.34 E-value=2.9 Score=26.88 Aligned_cols=50 Identities=14% Similarity=0.098 Sum_probs=35.4
Q ss_pred HHHHHHHHhhccCCCHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHHhH
Q psy9898 8 QAEVVEFLVHKSGVTIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQLR 60 (82)
Q Consensus 8 ~~~Ive~Li~~~~~s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~lR 60 (82)
....++.....++.+....++++..||-.|.... |...|+.+|++|+.+-
T Consensus 202 ~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~A~~~~~~al~~~ 251 (272)
T 3u4t_A 202 YEKLIEVCAPGGAKYKDELIEANEYIAYYYTINR---DKVKADAAWKNILALD 251 (272)
T ss_dssp HHHHHHHHGGGGGGGHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhcccccchHHHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHhcC
Confidence 3444444444443224446789999999997766 8899999999999863
No 2
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=77.69 E-value=1.9 Score=26.09 Aligned_cols=33 Identities=21% Similarity=0.129 Sum_probs=22.8
Q ss_pred HHHHHHHHHhCcccccccccccHHHHHHHHHHHHHh
Q psy9898 24 EEKIDALELLGASFANDKENYCLTSAFKYLYKTMQL 59 (82)
Q Consensus 24 ~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~l 59 (82)
.+...|+.-||-.|...+ |...|+.+|.+|+.+
T Consensus 5 ~d~A~a~~~lG~~~~~~~---~~~~A~~~y~~Al~~ 37 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQK---DFEKAHVHYDKAIEL 37 (127)
T ss_dssp HHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHh
Confidence 455667777777776655 667777777777765
No 3
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=72.98 E-value=5.4 Score=25.16 Aligned_cols=54 Identities=19% Similarity=0.218 Sum_probs=41.0
Q ss_pred hhhhHHHHHHHHhhccCCCHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHHhH
Q psy9898 4 AERTQAEVVEFLVHKSGVTIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQLR 60 (82)
Q Consensus 4 a~~g~~~Ive~Li~~~~~s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~lR 60 (82)
|+.-..+.++.+....+.......+++..+|-.|.... +...|+.++.+|+.+.
T Consensus 20 A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g---~~~~A~~~~~~al~~~ 73 (283)
T 3edt_B 20 AVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQN---KYKEAAHLLNDALAIR 73 (283)
T ss_dssp HHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcc---cHHHHHHHHHHHHHHH
Confidence 44455566666665544455678899999999998766 7899999999999874
No 4
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=65.16 E-value=13 Score=25.99 Aligned_cols=40 Identities=18% Similarity=0.114 Sum_probs=36.2
Q ss_pred cC-CCHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHHhHh
Q psy9898 19 SG-VTIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQLRI 61 (82)
Q Consensus 19 ~~-~s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~lR~ 61 (82)
++ .|++.+..++=++|-++..++ ...+|..++++|+.+|.
T Consensus 54 ~~~~sp~~~~~~l~~ladalf~~~---eyrrA~~~y~qALq~~k 94 (167)
T 3ffl_A 54 PELFSPPQKYQLLVYHADSLFHDK---EYRNAVSKYTMALQQKK 94 (167)
T ss_dssp TTSSCHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHccc---HHHHHHHHHHHHHHHHH
Confidence 44 389999999999999999888 77999999999999987
No 5
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=63.78 E-value=8 Score=32.25 Aligned_cols=29 Identities=28% Similarity=0.422 Sum_probs=19.9
Q ss_pred HHHHHHhhccCCCHHHHHHHHHHhCccccccc
Q psy9898 10 EVVEFLVHKSGVTIEEKIDALELLGASFANDK 41 (82)
Q Consensus 10 ~Ive~Li~~~~~s~~~rIdALELLGATf~dkk 41 (82)
++.+.|-.=+.+ +-.|||||||.+|.|..
T Consensus 96 ~a~~lL~~W~~~---~~~dALeLL~~~f~~~~ 124 (696)
T 2x6h_A 96 QALWMLANWAPM---DVEDALELLSPTFTHPQ 124 (696)
T ss_dssp HHHHHHHHSCCC---CHHHHHHHHSTTCCCHH
T ss_pred HHHHHHhcCCCC---CHHHHHHHhcccCCCHH
Confidence 445555554433 45699999999997654
No 6
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=63.37 E-value=7.6 Score=22.02 Aligned_cols=32 Identities=13% Similarity=-0.017 Sum_probs=14.6
Q ss_pred HHHHHHHHhCcccccccccccHHHHHHHHHHHHHh
Q psy9898 25 EKIDALELLGASFANDKENYCLTSAFKYLYKTMQL 59 (82)
Q Consensus 25 ~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~l 59 (82)
....++-.+|-.|.... +...|+.++++|+.+
T Consensus 7 ~~~~~~~~l~~~~~~~~---~~~~A~~~~~~al~~ 38 (164)
T 3ro3_A 7 AQGRAFGNLGNTHYLLG---NFRDAVIAHEQRLLI 38 (164)
T ss_dssp HHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHH
Confidence 34444444444444333 444444444444443
No 7
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=61.67 E-value=4.1 Score=25.17 Aligned_cols=32 Identities=25% Similarity=0.132 Sum_probs=15.5
Q ss_pred HHHHHhCcccccccc-cccHHHHHHHHHHHHHh
Q psy9898 28 DALELLGASFANDKE-NYCLTSAFKYLYKTMQL 59 (82)
Q Consensus 28 dALELLGATf~dkk~-~~D~~~A~~~Wr~AM~l 59 (82)
+|.--||-.|.+-.. ..|...|++++++|.+.
T Consensus 94 ~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 126 (138)
T 1klx_A 94 DGCLILGYKQYAGKGVVKNEKQAVKTFEKACRL 126 (138)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHC
Confidence 444455555554100 02555666666666554
No 8
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=61.11 E-value=18 Score=22.59 Aligned_cols=36 Identities=11% Similarity=0.110 Sum_probs=30.0
Q ss_pred CHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHHhH
Q psy9898 22 TIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQLR 60 (82)
Q Consensus 22 s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~lR 60 (82)
.......++-.+|-.|.... +...|+.++++|+.+.
T Consensus 80 ~~~~~~~~~~~l~~~~~~~g---~~~~A~~~~~~al~~~ 115 (283)
T 3edt_B 80 DHPAVAATLNNLAVLYGKRG---KYKEAEPLCKRALEIR 115 (283)
T ss_dssp TCHHHHHHHHHHHHHHHTTT---CHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHH
Confidence 34567789999999998766 8899999999999874
No 9
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=60.57 E-value=4.9 Score=24.01 Aligned_cols=29 Identities=14% Similarity=0.044 Sum_probs=24.6
Q ss_pred HHHHHHhCcccccccccccHHHHHHHHHHHHH
Q psy9898 27 IDALELLGASFANDKENYCLTSAFKYLYKTMQ 58 (82)
Q Consensus 27 IdALELLGATf~dkk~~~D~~~A~~~Wr~AM~ 58 (82)
..|+-+||-.+.... |...|+.+|.++..
T Consensus 43 ~rA~~~lg~~~~~~g---~y~~Ai~~w~~~l~ 71 (93)
T 3bee_A 43 EAALSLIANDHFISF---RFQEAIDTWVLLLD 71 (93)
T ss_dssp HHHHHHHHHHHHHTT---CHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcC---CHHHHHHHHHHHHh
Confidence 468888988887766 88999999999876
No 10
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=59.85 E-value=17 Score=25.14 Aligned_cols=48 Identities=21% Similarity=0.194 Sum_probs=36.6
Q ss_pred HHHHHHhhccCCCHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHHhHhC
Q psy9898 10 EVVEFLVHKSGVTIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQLRIG 62 (82)
Q Consensus 10 ~Ive~Li~~~~~s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~lR~~ 62 (82)
+-++++... -......+++..||-.|.... +...|+.|+++|+.++-.
T Consensus 324 ~al~~~~~~--~~~~~~~~~~~~la~~y~~~g---~~~~A~~~~~~al~~~~~ 371 (383)
T 3ulq_A 324 GFFDFLESK--MLYADLEDFAIDVAKYYHERK---NFQKASAYFLKVEQVRQL 371 (383)
T ss_dssp HHHHHHHHT--TCHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHC--cCHHHHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHHHHH
Confidence 344455443 245667789999999998776 889999999999999864
No 11
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=59.71 E-value=7.7 Score=23.35 Aligned_cols=32 Identities=9% Similarity=0.092 Sum_probs=24.6
Q ss_pred HHHHHHHHhCcccccccccccHHHHHHHHHHHHHh
Q psy9898 25 EKIDALELLGASFANDKENYCLTSAFKYLYKTMQL 59 (82)
Q Consensus 25 ~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~l 59 (82)
+..+++.-+|-.|.... |...|+.++.+|+.+
T Consensus 11 ~~a~~~~~~G~~~~~~g---~~~~A~~~~~~al~~ 42 (126)
T 4gco_A 11 ELAQEEKNKGNEYFKKG---DYPTAMRHYNEAVKR 42 (126)
T ss_dssp HHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHh
Confidence 45677777888887766 778888888888765
No 12
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=59.65 E-value=5 Score=33.05 Aligned_cols=29 Identities=28% Similarity=0.426 Sum_probs=20.3
Q ss_pred HHHHHHhhccCCCHHHHHHHHHHhCccccccc
Q psy9898 10 EVVEFLVHKSGVTIEEKIDALELLGASFANDK 41 (82)
Q Consensus 10 ~Ive~Li~~~~~s~~~rIdALELLGATf~dkk 41 (82)
++.+.|-.=+.. +-.|||||||..|.|..
T Consensus 82 ~a~~LL~~W~~i---~~~dALELL~~~f~d~~ 110 (614)
T 3ls8_A 82 QALELLGKWKPM---DVEDSLELLSSHYTNPT 110 (614)
T ss_dssp HHHHHHHHSCCC---CHHHHGGGGSTTCCCHH
T ss_pred HHHHHHhhCCCC---CHHHHHHhCcccCCCHH
Confidence 455666554433 44589999999998764
No 13
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=56.22 E-value=4 Score=26.49 Aligned_cols=17 Identities=29% Similarity=0.339 Sum_probs=14.9
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.||..|+.++|++|+++
T Consensus 10 ~Aa~~G~~~~v~~Ll~~ 26 (169)
T 4gpm_A 10 EAAENGNKDRVKDLIEN 26 (169)
T ss_dssp HHHHTTCHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHC
Confidence 58899999999999875
No 14
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=54.49 E-value=6.4 Score=22.06 Aligned_cols=17 Identities=35% Similarity=0.427 Sum_probs=15.0
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.||..|+.+++++|+++
T Consensus 8 ~A~~~~~~~~v~~Ll~~ 24 (93)
T 1n0q_A 8 LAARNGHLEVVKLLLEA 24 (93)
T ss_dssp HHHHHTCHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHc
Confidence 48889999999999975
No 15
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=53.65 E-value=32 Score=21.65 Aligned_cols=44 Identities=14% Similarity=0.114 Sum_probs=27.7
Q ss_pred HHHhhccCCCHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHHh
Q psy9898 13 EFLVHKSGVTIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQL 59 (82)
Q Consensus 13 e~Li~~~~~s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~l 59 (82)
+-.++....+.....+++-.+|-.+.... +...|+.++++|+.+
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~A~~~~~~al~~ 72 (275)
T 1xnf_A 29 EQILASRALTDDERAQLLYERGVLYDSLG---LRALARNDFSQALAI 72 (275)
T ss_dssp HHHHTSSCCCHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHH
T ss_pred HHHHhcccccCchhHHHHHHHHHHHHHcc---cHHHHHHHHHHHHHc
Confidence 33333333345666777777777777665 666777777777664
No 16
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=53.10 E-value=33 Score=20.29 Aligned_cols=35 Identities=14% Similarity=0.254 Sum_probs=28.3
Q ss_pred CHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHHh
Q psy9898 22 TIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQL 59 (82)
Q Consensus 22 s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~l 59 (82)
.......++--+|-.+.... +...|+.++++|+.+
T Consensus 78 ~~~~~a~~~~~lg~~~~~~~---~~~~A~~~~~kal~~ 112 (127)
T 4gcn_A 78 DYKLIAKAMSRAGNAFQKQN---DLSLAVQWFHRSLSE 112 (127)
T ss_dssp CHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHhh
Confidence 45566778888998887665 889999999999875
No 17
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=52.37 E-value=9.1 Score=20.23 Aligned_cols=29 Identities=24% Similarity=0.387 Sum_probs=17.2
Q ss_pred HHHHHhCcccccccccccHHHHHHHHHHHHHh
Q psy9898 28 DALELLGASFANDKENYCLTSAFKYLYKTMQL 59 (82)
Q Consensus 28 dALELLGATf~dkk~~~D~~~A~~~Wr~AM~l 59 (82)
+++-.+|-.+.... +...|+.++++|+.+
T Consensus 44 ~~~~~l~~~~~~~~---~~~~A~~~~~~a~~~ 72 (91)
T 1na3_A 44 EAWYNLGNAYYKQG---DYDEAIEYYQKALEL 72 (91)
T ss_dssp HHHHHHHHHHHHTT---CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh---hHHHHHHHHHHHHhc
Confidence 44555555555443 566777777777664
No 18
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=51.07 E-value=13 Score=20.23 Aligned_cols=28 Identities=11% Similarity=0.089 Sum_probs=12.2
Q ss_pred HHHHHhCcccccccccccHHHHHHHHHHHHH
Q psy9898 28 DALELLGASFANDKENYCLTSAFKYLYKTMQ 58 (82)
Q Consensus 28 dALELLGATf~dkk~~~D~~~A~~~Wr~AM~ 58 (82)
+++-.+|-.+.... +...|+.++.+|+.
T Consensus 5 ~~~~~~g~~~~~~~---~~~~A~~~~~~al~ 32 (111)
T 2l6j_A 5 EKQKEQGNSLFKQG---LYREAVHCYDQLIT 32 (111)
T ss_dssp HHHHHHHHHHHTTT---CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC---CHHHHHHHHHHHHh
Confidence 33444444444333 44444444444444
No 19
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=50.62 E-value=24 Score=22.59 Aligned_cols=36 Identities=14% Similarity=0.258 Sum_probs=29.9
Q ss_pred CHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHHhH
Q psy9898 22 TIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQLR 60 (82)
Q Consensus 22 s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~lR 60 (82)
+......++..+|..|.... +...|+.++++|+.+-
T Consensus 64 ~~~~~~~~~~~la~~~~~~g---~~~~A~~~~~~al~~~ 99 (311)
T 3nf1_A 64 DHPDVATMLNILALVYRDQN---KYKDAANLLNDALAIR 99 (311)
T ss_dssp SSHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHHH
Confidence 45677899999999988766 7889999999999873
No 20
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=50.48 E-value=7.1 Score=26.87 Aligned_cols=17 Identities=24% Similarity=0.554 Sum_probs=15.2
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.||..||.+||++|+++
T Consensus 65 ~A~~~g~~~iv~~Ll~~ 81 (337)
T 4g8k_A 65 NAVQMSREDIVELLLRH 81 (337)
T ss_dssp HHHHTTCHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHc
Confidence 58899999999999976
No 21
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=50.09 E-value=13 Score=21.26 Aligned_cols=15 Identities=13% Similarity=0.126 Sum_probs=8.3
Q ss_pred cHHHHHHHHHHHHHh
Q psy9898 45 CLTSAFKYLYKTMQL 59 (82)
Q Consensus 45 D~~~A~~~Wr~AM~l 59 (82)
+...|+.++++|+.+
T Consensus 53 ~~~~A~~~~~~al~~ 67 (126)
T 3upv_A 53 SFPEAIADCNKAIEK 67 (126)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh
Confidence 445555555555554
No 22
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=49.95 E-value=10 Score=21.57 Aligned_cols=31 Identities=10% Similarity=0.129 Sum_probs=25.8
Q ss_pred HHHHHHhCcccccccccccHHHHHHHHHHHHHhH
Q psy9898 27 IDALELLGASFANDKENYCLTSAFKYLYKTMQLR 60 (82)
Q Consensus 27 IdALELLGATf~dkk~~~D~~~A~~~Wr~AM~lR 60 (82)
.+++-.||-.|.... +...|+.+|++|+.+-
T Consensus 41 ~~a~~~lg~~~~~~g---~~~~A~~~~~~al~l~ 71 (100)
T 3ma5_A 41 VGTYYHLGKLYERLD---RTDDAIDTYAQGIEVA 71 (100)
T ss_dssp THHHHHHHHHHHHTT---CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC---CHHHHHHHHHHHHhhh
Confidence 358888999887766 7899999999999873
No 23
>3zqo_A Terminase small subunit; DNA-binding protein, molecular motor, DNA packaging; 1.68A {Bacillus phage SF6} PDB: 3zqn_A 3zqm_A
Probab=48.94 E-value=7.9 Score=23.42 Aligned_cols=14 Identities=57% Similarity=0.947 Sum_probs=12.6
Q ss_pred CCHHHHHHHHHHhC
Q psy9898 21 VTIEEKIDALELLG 34 (82)
Q Consensus 21 ~s~~~rIdALELLG 34 (82)
.+..+|+.|+||||
T Consensus 57 p~~kdr~kA~elLg 70 (72)
T 3zqo_A 57 VSAKDRIKALELLG 70 (72)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhc
Confidence 57899999999997
No 24
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=48.21 E-value=28 Score=24.03 Aligned_cols=47 Identities=13% Similarity=0.190 Sum_probs=32.8
Q ss_pred HHHHHHhhccCCCHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHHhH
Q psy9898 10 EVVEFLVHKSGVTIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQLR 60 (82)
Q Consensus 10 ~Ive~Li~~~~~s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~lR 60 (82)
...+.+....+. ....+.++-.||..|.+.. +...|+.++.+|+.+.
T Consensus 166 ~al~~~~~~~~~-~~~~~~~~~~lg~~y~~~~---~~~~A~~~~~~al~~~ 212 (378)
T 3q15_A 166 QALDIYQNHPLY-SIRTIQSLFVIAGNYDDFK---HYDKALPHLEAALELA 212 (378)
T ss_dssp HHHHHHHTSTTC-HHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCc-hhhHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHH
Confidence 334444443322 4467888889999988776 7788999999998874
No 25
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=47.81 E-value=19 Score=20.63 Aligned_cols=34 Identities=15% Similarity=0.045 Sum_probs=26.2
Q ss_pred HHHHHHHHHHhCcccccccccccHHHHHHHHHHHHHh
Q psy9898 23 IEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQL 59 (82)
Q Consensus 23 ~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~l 59 (82)
..+..+++-.||.+|.... +...|+.++++|+.+
T Consensus 23 ~p~~~~~~~~lg~~~~~~~---~~~~A~~~~~~al~~ 56 (117)
T 3k9i_A 23 GKDLAECYLGLGSTFRTLG---EYRKAEAVLANGVKQ 56 (117)
T ss_dssp HHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHh
Confidence 4566788888888887766 677888888888775
No 26
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=47.67 E-value=12 Score=22.75 Aligned_cols=30 Identities=23% Similarity=0.401 Sum_probs=24.0
Q ss_pred HHHHHHhCcccccccccccHHHHHHHHHHHHHh
Q psy9898 27 IDALELLGASFANDKENYCLTSAFKYLYKTMQL 59 (82)
Q Consensus 27 IdALELLGATf~dkk~~~D~~~A~~~Wr~AM~l 59 (82)
.+++-.+|-.|.... +...|+.++++|+++
T Consensus 141 ~~~~~~lg~~~~~~g---~~~~A~~~~~~al~~ 170 (184)
T 3vtx_A 141 IRAYQSIGLAYEGKG---LRDEAVKYFKKALEK 170 (184)
T ss_dssp HHHHHHHHHHHHHTT---CHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHCC---CHHHHHHHHHHHHhC
Confidence 467788888887655 778999999999876
No 27
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=47.51 E-value=13 Score=21.60 Aligned_cols=32 Identities=13% Similarity=0.274 Sum_probs=16.7
Q ss_pred HHHHHHHHHhCcccccccccccHHHHHHHHHHHHH
Q psy9898 24 EEKIDALELLGASFANDKENYCLTSAFKYLYKTMQ 58 (82)
Q Consensus 24 ~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~ 58 (82)
.+..+++-.+|-.+.... |...|+.++.+|+.
T Consensus 10 ~~~~~~~~~~a~~~~~~~---~~~~A~~~~~~al~ 41 (166)
T 1a17_A 10 LKRAEELKTQANDYFKAK---DYENAIKFYSQAIE 41 (166)
T ss_dssp HHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcc---CHHHHHHHHHHHHH
Confidence 444555555555555444 45555555555554
No 28
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=47.41 E-value=16 Score=20.04 Aligned_cols=16 Identities=6% Similarity=0.013 Sum_probs=10.7
Q ss_pred cHHHHHHHHHHHHHhH
Q psy9898 45 CLTSAFKYLYKTMQLR 60 (82)
Q Consensus 45 D~~~A~~~Wr~AM~lR 60 (82)
+...|+.++.+++.+-
T Consensus 53 ~~~~A~~~~~~~~~~~ 68 (131)
T 1elr_A 53 DYNKCRELCEKAIEVG 68 (131)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhc
Confidence 5667777777777653
No 29
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=47.29 E-value=34 Score=21.83 Aligned_cols=35 Identities=11% Similarity=0.113 Sum_probs=29.0
Q ss_pred HHHHHHHHHHhCcccccccccccHHHHHHHHHHHHHhH
Q psy9898 23 IEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQLR 60 (82)
Q Consensus 23 ~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~lR 60 (82)
......++-.+|..|.... +...|+.++.+|+.+.
T Consensus 107 ~~~~~~~~~~l~~~~~~~g---~~~~A~~~~~~a~~~~ 141 (311)
T 3nf1_A 107 HPAVAATLNNLAVLYGKRG---KYKEAEPLCKRALEIR 141 (311)
T ss_dssp CHHHHHHHHHHHHHHHTTT---CHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHcC---cHHHHHHHHHHHHHHH
Confidence 4566788999999887766 7889999999999874
No 30
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=47.27 E-value=38 Score=21.49 Aligned_cols=36 Identities=14% Similarity=0.180 Sum_probs=27.6
Q ss_pred CCHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHHh
Q psy9898 21 VTIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQL 59 (82)
Q Consensus 21 ~s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~l 59 (82)
-+.....+++-.+|-.|.... +...|+.++.+|+.+
T Consensus 37 ~~~~~~~~~~~~l~~~~~~~g---~~~~A~~~~~~al~~ 72 (338)
T 3ro2_A 37 EDLKTLSAIYSQLGNAYFYLH---DYAKALEYHHHDLTL 72 (338)
T ss_dssp SCHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHH
Confidence 356666788888888887665 678888888888776
No 31
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=47.06 E-value=14 Score=23.97 Aligned_cols=33 Identities=27% Similarity=0.268 Sum_probs=16.7
Q ss_pred HHHHHHhCcccccccc-cccHHHHHHHHHHHHHh
Q psy9898 27 IDALELLGASFANDKE-NYCLTSAFKYLYKTMQL 59 (82)
Q Consensus 27 IdALELLGATf~dkk~-~~D~~~A~~~Wr~AM~l 59 (82)
.+|+-.||-.|.+... ..|...|+.++++|..+
T Consensus 125 ~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 125 VDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL 158 (212)
T ss_dssp HHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc
Confidence 4555555555555111 01555555555555554
No 32
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=46.38 E-value=9.7 Score=22.73 Aligned_cols=17 Identities=29% Similarity=0.341 Sum_probs=14.8
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.||..|+.++|++|+++
T Consensus 20 ~A~~~g~~~~v~~Ll~~ 36 (136)
T 2jab_A 20 EAARAGQDDEVRILMAN 36 (136)
T ss_dssp HHHHHTCHHHHHHHHHT
T ss_pred HHHHhCCHHHHHHHHHc
Confidence 48889999999999876
No 33
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=46.32 E-value=16 Score=22.14 Aligned_cols=32 Identities=16% Similarity=0.200 Sum_probs=19.6
Q ss_pred HHHHHHHHhCcccccccccccHHHHHHHHHHHHHh
Q psy9898 25 EKIDALELLGASFANDKENYCLTSAFKYLYKTMQL 59 (82)
Q Consensus 25 ~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~l 59 (82)
+..+++-.+|-.+.... +...|+.++++|+.+
T Consensus 9 ~~a~~~~~~g~~~~~~g---~~~~A~~~~~~al~~ 40 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARK---EYSKAIDLYTQALSI 40 (164)
T ss_dssp HHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHh
Confidence 44566666666666554 556666666666654
No 34
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=46.27 E-value=36 Score=23.48 Aligned_cols=47 Identities=11% Similarity=0.129 Sum_probs=35.0
Q ss_pred HHHHHHhhccCCCHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHHhHh
Q psy9898 10 EVVEFLVHKSGVTIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQLRI 61 (82)
Q Consensus 10 ~Ive~Li~~~~~s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~lR~ 61 (82)
+-+++|.... ...+..+++..||-.|.... |...|+.|+++|+.++-
T Consensus 321 ~al~~~~~~~--~~~~~~~~~~~la~~y~~~g---~~~~A~~~~~~al~~~~ 367 (378)
T 3q15_A 321 DLLSYFEKKN--LHAYIEACARSAAAVFESSC---HFEQAAAFYRKVLKAQE 367 (378)
T ss_dssp HHHHHHHHTT--CHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCC--ChhHHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHHHH
Confidence 3445554432 35566678888999888776 88999999999999875
No 35
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=45.75 E-value=14 Score=22.69 Aligned_cols=30 Identities=17% Similarity=0.268 Sum_probs=25.3
Q ss_pred HHHHHHhCcccccccccccHHHHHHHHHHHHHh
Q psy9898 27 IDALELLGASFANDKENYCLTSAFKYLYKTMQL 59 (82)
Q Consensus 27 IdALELLGATf~dkk~~~D~~~A~~~Wr~AM~l 59 (82)
.+|+-.||-.|.... +...|+.++++|+.+
T Consensus 65 ~~a~~~lg~~~~~~~---~~~~A~~~~~~al~~ 94 (150)
T 4ga2_A 65 PKAHRFLGLLYELEE---NTDKAVECYRRSVEL 94 (150)
T ss_dssp HHHHHHHHHHHHHTT---CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC---chHHHHHHHHHHHHh
Confidence 578889998887665 788999999999886
No 36
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.96 E-value=20 Score=20.40 Aligned_cols=34 Identities=9% Similarity=-0.125 Sum_probs=26.8
Q ss_pred HHHHHHHHHHhCcccccccccccHHHHHHHHHHHHHh
Q psy9898 23 IEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQL 59 (82)
Q Consensus 23 ~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~l 59 (82)
.....+++..+|..|.... +...|+.++.+++.+
T Consensus 61 ~~~~~~~~~~~a~~~~~~~---~~~~A~~~~~~~~~~ 94 (148)
T 2dba_A 61 PQDQAVLHRNRAACHLKLE---DYDKAETEASKAIEK 94 (148)
T ss_dssp HHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHc---cHHHHHHHHHHHHhh
Confidence 3445788888998887766 778899999988875
No 37
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=44.72 E-value=11 Score=21.97 Aligned_cols=17 Identities=35% Similarity=0.427 Sum_probs=12.2
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.||..|+.++|++|+++
T Consensus 63 ~A~~~~~~~~v~~Ll~~ 79 (110)
T 2zgd_A 63 LAARNGHLEVVKLLLEA 79 (110)
T ss_dssp HHHHTTCHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHc
Confidence 46777777777777765
No 38
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=44.59 E-value=17 Score=21.89 Aligned_cols=34 Identities=15% Similarity=0.121 Sum_probs=28.5
Q ss_pred HHHHHHHHHHhCcccccccccccHHHHHHHHHHHHHh
Q psy9898 23 IEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQL 59 (82)
Q Consensus 23 ~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~l 59 (82)
+.+.++++.-+|-.+.... +...|+.++.+|+.+
T Consensus 7 ~~~~a~~~~~~G~~~~~~~---~~~~A~~~y~~al~~ 40 (162)
T 3rkv_A 7 KLKSVEALRQKGNELFVQK---DYKEAIDAYRDALTR 40 (162)
T ss_dssp -CHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHH
Confidence 4456788899999998777 889999999999987
No 39
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=44.28 E-value=8.6 Score=25.22 Aligned_cols=18 Identities=11% Similarity=0.324 Sum_probs=16.2
Q ss_pred hhhhhhHHHHHHHHhhcc
Q psy9898 2 SAAERTQAEVVEFLVHKS 19 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~~ 19 (82)
.|+..|+.+||++|+++.
T Consensus 231 ~A~~~g~~~~v~~Ll~~g 248 (260)
T 3jxi_A 231 MAAKTGKIGIFQHIIRRE 248 (260)
T ss_dssp HHHHTTCHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHhC
Confidence 589999999999999875
No 40
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=43.98 E-value=11 Score=21.94 Aligned_cols=17 Identities=29% Similarity=0.358 Sum_probs=11.9
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.|+..|+.++|++|+++
T Consensus 79 ~A~~~~~~~~v~~Ll~~ 95 (123)
T 3aaa_C 79 SAVYEGHVSCVKLLLSK 95 (123)
T ss_dssp HHHHHTCHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHc
Confidence 36667777777777765
No 41
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=43.94 E-value=43 Score=22.33 Aligned_cols=37 Identities=14% Similarity=0.169 Sum_probs=28.4
Q ss_pred CCHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHHhH
Q psy9898 21 VTIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQLR 60 (82)
Q Consensus 21 ~s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~lR 60 (82)
-+.....+++-.+|..|.... |...|+.++++|+.+-
T Consensus 41 ~~~~~~~~~~~~l~~~~~~~g---~~~~A~~~~~~al~~~ 77 (406)
T 3sf4_A 41 EDLKTLSAIYSQLGNAYFYLH---DYAKALEYHHHDLTLA 77 (406)
T ss_dssp SCHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHH
Confidence 356666788888888887655 7788888888888763
No 42
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=43.78 E-value=26 Score=19.08 Aligned_cols=14 Identities=7% Similarity=-0.007 Sum_probs=7.0
Q ss_pred cHHHHHHHHHHHHH
Q psy9898 45 CLTSAFKYLYKTMQ 58 (82)
Q Consensus 45 D~~~A~~~Wr~AM~ 58 (82)
+...|+.++.+++.
T Consensus 61 ~~~~A~~~~~~~~~ 74 (131)
T 2vyi_A 61 NYAGAVQDCERAIC 74 (131)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHh
Confidence 44455555555544
No 43
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=43.43 E-value=52 Score=19.73 Aligned_cols=37 Identities=16% Similarity=0.035 Sum_probs=29.4
Q ss_pred CHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHHhHh
Q psy9898 22 TIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQLRI 61 (82)
Q Consensus 22 s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~lR~ 61 (82)
.+.....++..+|-.+.... |...|..++++|+.+.-
T Consensus 142 ~~~~~~~~~~~la~~~~~~g---~~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 142 DQVAIACAFRGLGDLAQQEK---NLLEAQQHWLRARDIFA 178 (203)
T ss_dssp CHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHCc---CHHHHHHHHHHHHHHHH
Confidence 35556777888898887766 77899999999998843
No 44
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=42.32 E-value=11 Score=28.00 Aligned_cols=18 Identities=28% Similarity=0.228 Sum_probs=12.7
Q ss_pred hhhhhhHHHHHHHHhhcc
Q psy9898 2 SAAERTQAEVVEFLVHKS 19 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~~ 19 (82)
.||..||.+||++|+++.
T Consensus 134 ~Aa~~G~~eiv~~Ll~~g 151 (376)
T 2aja_A 134 LAAENGHLHVLNRLCELA 151 (376)
T ss_dssp HHHHTTCHHHHHHHHHSC
T ss_pred HHHHcCCHHHHHHHHhCC
Confidence 467777777777777664
No 45
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=42.17 E-value=56 Score=22.40 Aligned_cols=35 Identities=14% Similarity=0.155 Sum_probs=27.0
Q ss_pred HHHHHHHHHHhCcccccccccccHHHHHHHHHHHHHhH
Q psy9898 23 IEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQLR 60 (82)
Q Consensus 23 ~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~lR 60 (82)
....+.++-.||..|.+.. +...|+.++.+|+.+-
T Consensus 180 ~~~~~~~~~~lg~~~~~~g---~~~~A~~~~~~al~~~ 214 (383)
T 3ulq_A 180 NIRLLQCHSLFATNFLDLK---QYEDAISHFQKAYSMA 214 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHH
Confidence 5566788888888887766 6778888888888763
No 46
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=42.06 E-value=10 Score=24.36 Aligned_cols=18 Identities=17% Similarity=0.174 Sum_probs=16.0
Q ss_pred hhhhhhHHHHHHHHhhcc
Q psy9898 2 SAAERTQAEVVEFLVHKS 19 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~~ 19 (82)
.|+..|+.+||++|+++.
T Consensus 203 ~A~~~g~~~~v~~Ll~~g 220 (232)
T 2rfa_A 203 LAGVEGNIVMFQHLMQKR 220 (232)
T ss_dssp HHHHHTCHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHhcC
Confidence 588999999999999874
No 47
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=41.80 E-value=12 Score=23.04 Aligned_cols=17 Identities=24% Similarity=0.317 Sum_probs=12.4
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.||..|+.++|++|+++
T Consensus 20 ~A~~~g~~~~v~~Ll~~ 36 (169)
T 2y1l_E 20 EAARAGRDDEVRILMAN 36 (169)
T ss_dssp HHHHHTCHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHC
Confidence 46777777777777765
No 48
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=41.21 E-value=65 Score=21.42 Aligned_cols=50 Identities=8% Similarity=0.026 Sum_probs=37.0
Q ss_pred HHHHHHHHhhccCCCHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHHhHh
Q psy9898 8 QAEVVEFLVHKSGVTIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQLRI 61 (82)
Q Consensus 8 ~~~Ive~Li~~~~~s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~lR~ 61 (82)
.....+.+...+. .....+.++--+|.+|.... +...|+.|..+|+.+--
T Consensus 178 ~~~al~~~~~~~~-~~~~~~~~~~nlg~~y~~~~---~y~~A~~~~~~al~~~~ 227 (293)
T 3u3w_A 178 FEQILKQLEALHD-NEEFDVKVRYNHAKALYLDS---RYEESLYQVNKAIEISC 227 (293)
T ss_dssp HHHHHHHHHHSSC-CHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccc-chhHHHHHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHH
Confidence 3344444444432 67777889999999998776 78999999999998753
No 49
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=40.89 E-value=14 Score=20.97 Aligned_cols=17 Identities=35% Similarity=0.427 Sum_probs=11.9
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.|+..|+.+++++|+++
T Consensus 74 ~A~~~~~~~~~~~Ll~~ 90 (126)
T 1n0r_A 74 LAARNGHLEVVKLLLEA 90 (126)
T ss_dssp HHHHTTCHHHHHHHHHT
T ss_pred HHHHcChHHHHHHHHHc
Confidence 36667777777777764
No 50
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=39.85 E-value=31 Score=20.33 Aligned_cols=29 Identities=28% Similarity=0.257 Sum_probs=19.8
Q ss_pred CCHHHHHHHHHHhCcccc--cccccccHHHHHH
Q psy9898 21 VTIEEKIDALELLGASFA--NDKENYCLTSAFK 51 (82)
Q Consensus 21 ~s~~~rIdALELLGATf~--dkk~~~D~~~A~~ 51 (82)
.+.+++.+++++||-.-- -.. .++..|++
T Consensus 5 ~~~~~~~~~y~iLgl~~~~~a~~--~eIk~aYr 35 (79)
T 1faf_A 5 LSRADKERLLELLKLPRQLWGDF--GRMQQAYK 35 (79)
T ss_dssp CCHHHHHHHHHHHTCCSSSTTCH--HHHHHHHH
T ss_pred ccchhHHHHHHHcCCCCCCCCCH--HHHHHHHH
Confidence 467888999999998643 222 36666643
No 51
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=39.82 E-value=19 Score=19.30 Aligned_cols=15 Identities=27% Similarity=0.226 Sum_probs=10.4
Q ss_pred cHHHHHHHHHHHHHh
Q psy9898 45 CLTSAFKYLYKTMQL 59 (82)
Q Consensus 45 D~~~A~~~Wr~AM~l 59 (82)
+...|+.++++++.+
T Consensus 53 ~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 53 DYQKAYEDGCKTVDL 67 (118)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHh
Confidence 566777777777664
No 52
>3rjp_A COVR; winged helix-turn-helix, DNA binding, DNA binding protein; 1.50A {Streptococcus pyogenes}
Probab=39.36 E-value=56 Score=18.97 Aligned_cols=47 Identities=15% Similarity=0.238 Sum_probs=34.0
Q ss_pred HHHHHHHHhhccC--CCHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHH
Q psy9898 8 QAEVVEFLVHKSG--VTIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQ 58 (82)
Q Consensus 8 ~~~Ive~Li~~~~--~s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~ 58 (82)
..+++++|+.+++ +|+++.++++ -|..+.... +.+...+.-+|+.+.
T Consensus 27 E~~lL~~L~~~~g~~vsr~~L~~~v--w~~~~~~~~--~~l~~~I~rLRkkL~ 75 (96)
T 3rjp_A 27 EYDLLNILMTNMNRVMTREELLSNV--WKYDEAVET--NVVDVYIRYLRGKID 75 (96)
T ss_dssp HHHHHHHHHHTTTSCBCHHHHHHHH--SSSCSSCCT--HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCeeEcHHHHHHHH--cCCCCCCCc--chHHHHHHHHHHHhc
Confidence 3579999999987 6999998874 353332223 467888888888775
No 53
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=39.32 E-value=22 Score=30.61 Aligned_cols=29 Identities=28% Similarity=0.265 Sum_probs=19.7
Q ss_pred HHHHHHhhccCCCHHHHHHHHHHhCccccccc
Q psy9898 10 EVVEFLVHKSGVTIEEKIDALELLGASFANDK 41 (82)
Q Consensus 10 ~Ive~Li~~~~~s~~~rIdALELLGATf~dkk 41 (82)
++.++|-.=+ +-+-.+||||||..|.|..
T Consensus 459 ~~~~ll~~W~---~~~~~~ALeLL~~~f~d~~ 487 (940)
T 2wxf_A 459 QMLYLLCSWP---ELPVLSALELLDFSFPDCY 487 (940)
T ss_dssp HHHHHHHTCC---CCCHHHHHHHTSTTCCCHH
T ss_pred HHHHHHccCC---CCCHHHHHHhcCCcCCCHH
Confidence 4455554433 3345799999999998764
No 54
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=39.24 E-value=15 Score=21.91 Aligned_cols=17 Identities=18% Similarity=0.122 Sum_probs=14.5
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.|+..|+.++|++|+++
T Consensus 84 ~A~~~~~~~~v~~Ll~~ 100 (136)
T 1d9s_A 84 DAAREGFLDTLVVLHRA 100 (136)
T ss_dssp HHHHHTCHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHc
Confidence 47888999999999875
No 55
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=38.81 E-value=14 Score=21.15 Aligned_cols=16 Identities=31% Similarity=0.409 Sum_probs=9.6
Q ss_pred hhhhhHHHHHHHHhhc
Q psy9898 3 AAERTQAEVVEFLVHK 18 (82)
Q Consensus 3 Aa~~g~~~Ive~Li~~ 18 (82)
|+..|+.+|+++|+++
T Consensus 82 A~~~~~~~~~~~Ll~~ 97 (115)
T 2l6b_A 82 AKKNGHHEIVKLLDAK 97 (115)
T ss_dssp HHTTTCHHHHHHHHTT
T ss_pred HHHCCCHHHHHHHHHc
Confidence 5555666666666654
No 56
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=38.70 E-value=15 Score=22.04 Aligned_cols=17 Identities=24% Similarity=0.292 Sum_probs=14.4
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.|+..|+.++|++|+++
T Consensus 74 ~A~~~~~~~~v~~Ll~~ 90 (156)
T 1bd8_A 74 DAARTGFLDTLKVLVEH 90 (156)
T ss_dssp HHHHTTCHHHHHHHHHT
T ss_pred HHHHcCcHHHHHHHHHc
Confidence 47888999999999876
No 57
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=38.29 E-value=15 Score=21.69 Aligned_cols=17 Identities=29% Similarity=0.485 Sum_probs=13.0
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.|+..|+.+++++|+++
T Consensus 49 ~A~~~~~~~~~~~Ll~~ 65 (137)
T 3c5r_A 49 EACNHGHLKVVELLLQH 65 (137)
T ss_dssp HHHHTTCHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHc
Confidence 46777888888888775
No 58
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=38.17 E-value=27 Score=21.72 Aligned_cols=34 Identities=9% Similarity=0.084 Sum_probs=27.5
Q ss_pred HHHHHHHHHhCcccccccccccHHHHHHHHHHHHHhH
Q psy9898 24 EEKIDALELLGASFANDKENYCLTSAFKYLYKTMQLR 60 (82)
Q Consensus 24 ~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~lR 60 (82)
.+.++++-.+|-.+...+ +...|+.++.+|+.+-
T Consensus 35 ~~~~~~~~~~g~~~~~~~---~~~~A~~~~~~al~~~ 68 (198)
T 2fbn_A 35 VQSAFDIKEEGNEFFKKN---EINEAIVKYKEALDFF 68 (198)
T ss_dssp HHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHH
Confidence 346677888899888776 8899999999999853
No 59
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=37.94 E-value=19 Score=19.58 Aligned_cols=28 Identities=18% Similarity=0.255 Sum_probs=23.9
Q ss_pred HHHHhCcccccccccccHHHHHHHHHHHHHh
Q psy9898 29 ALELLGASFANDKENYCLTSAFKYLYKTMQL 59 (82)
Q Consensus 29 ALELLGATf~dkk~~~D~~~A~~~Wr~AM~l 59 (82)
++-.+|..|.... +...|+.++++|+.+
T Consensus 37 ~~~~lg~~~~~~~---~~~~A~~~~~~al~~ 64 (99)
T 2kc7_A 37 AYYLMGNAYRKLG---DWQKALNNYQSAIEL 64 (99)
T ss_dssp HHHHHHHHHHHHT---CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcC---CHHHHHHHHHHHHhc
Confidence 8888999887655 788999999999876
No 60
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=37.56 E-value=22 Score=20.97 Aligned_cols=30 Identities=23% Similarity=0.104 Sum_probs=24.7
Q ss_pred HHHHHHhCcccccccccccHHHHHHHHHHHHHh
Q psy9898 27 IDALELLGASFANDKENYCLTSAFKYLYKTMQL 59 (82)
Q Consensus 27 IdALELLGATf~dkk~~~D~~~A~~~Wr~AM~l 59 (82)
.+|+-.||-.+.... +...|+.++++|+.+
T Consensus 51 ~~a~~~lg~~~~~~g---~~~~A~~~~~~al~l 80 (121)
T 1hxi_A 51 EEAWRSLGLTQAENE---KDGLAIIALNHARML 80 (121)
T ss_dssp HHHHHHHHHHHHHTT---CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC---CHHHHHHHHHHHHHh
Confidence 578888888887665 778999999999886
No 61
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=37.56 E-value=14 Score=27.35 Aligned_cols=16 Identities=31% Similarity=0.277 Sum_probs=8.5
Q ss_pred hhhhhHHHHHHHHhhc
Q psy9898 3 AAERTQAEVVEFLVHK 18 (82)
Q Consensus 3 Aa~~g~~~Ive~Li~~ 18 (82)
||..||.+||++|+++
T Consensus 170 Aa~~G~~eiv~~Ll~~ 185 (376)
T 2aja_A 170 AAENGHLHVLNRLCEL 185 (376)
T ss_dssp HHHTTCHHHHHHHHHS
T ss_pred HHHCCCHHHHHHHHHc
Confidence 4555555555555544
No 62
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=36.99 E-value=33 Score=18.88 Aligned_cols=30 Identities=17% Similarity=0.050 Sum_probs=23.1
Q ss_pred HHHHHHhCcccccccccccHHHHHHHHHHHHHh
Q psy9898 27 IDALELLGASFANDKENYCLTSAFKYLYKTMQL 59 (82)
Q Consensus 27 IdALELLGATf~dkk~~~D~~~A~~~Wr~AM~l 59 (82)
.+++-.+|-.|.... +...|+.++.+|+.+
T Consensus 50 ~~~~~~la~~~~~~~---~~~~A~~~~~~a~~~ 79 (133)
T 2lni_A 50 AKLYSNRAACYTKLL---EFQLALKDCEECIQL 79 (133)
T ss_dssp HHHHHHHHHHHTTTT---CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc---cHHHHHHHHHHHHHh
Confidence 567788888886665 778888888888875
No 63
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=36.99 E-value=13 Score=24.33 Aligned_cols=18 Identities=17% Similarity=0.366 Sum_probs=16.0
Q ss_pred hhhhhhHHHHHHHHhhcc
Q psy9898 2 SAAERTQAEVVEFLVHKS 19 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~~ 19 (82)
.|+..|+.+||++|+++.
T Consensus 227 ~A~~~g~~~~v~~Ll~~g 244 (256)
T 2etb_A 227 LAAKEGKIEIFRHILQRE 244 (256)
T ss_dssp HHHHTTCHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHhCC
Confidence 589999999999999874
No 64
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=36.86 E-value=16 Score=22.14 Aligned_cols=17 Identities=35% Similarity=0.487 Sum_probs=13.8
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.|+..|+.++|++|+++
T Consensus 48 ~A~~~~~~~~v~~Ll~~ 64 (165)
T 3twr_A 48 FAAGYNRVSVVEYLLQH 64 (165)
T ss_dssp HHHHTTCHHHHHHHHHT
T ss_pred HHHHcChHHHHHHHHhc
Confidence 47788888888888875
No 65
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=36.70 E-value=24 Score=20.01 Aligned_cols=28 Identities=11% Similarity=0.081 Sum_probs=14.1
Q ss_pred HHHHHhCcccccccccccHHHHHHHHHHHHH
Q psy9898 28 DALELLGASFANDKENYCLTSAFKYLYKTMQ 58 (82)
Q Consensus 28 dALELLGATf~dkk~~~D~~~A~~~Wr~AM~ 58 (82)
+++-.+|-.+.... +...|+.++.+|+.
T Consensus 10 ~~~~~~g~~~~~~~---~~~~A~~~~~~al~ 37 (137)
T 3q49_B 10 QELKEQGNRLFVGR---KYPEAAACYGRAIT 37 (137)
T ss_dssp HHHHHHHHHHHHTT---CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC---cHHHHHHHHHHHHh
Confidence 44444555554443 44555555555554
No 66
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=36.59 E-value=24 Score=19.86 Aligned_cols=30 Identities=17% Similarity=0.246 Sum_probs=22.0
Q ss_pred HHHHHHhCcccccccccccHHHHHHHHHHHHHh
Q psy9898 27 IDALELLGASFANDKENYCLTSAFKYLYKTMQL 59 (82)
Q Consensus 27 IdALELLGATf~dkk~~~D~~~A~~~Wr~AM~l 59 (82)
.+++-.+|..|.... +...|+.++++|+.+
T Consensus 19 ~~~~~~lg~~~~~~g---~~~~A~~~~~~al~~ 48 (115)
T 2kat_A 19 MLLRFTLGKTYAEHE---QFDAALPHLRAALDF 48 (115)
T ss_dssp HHHHHHHHHHHHHTT---CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcc---CHHHHHHHHHHHHHH
Confidence 367777887776655 677788888888765
No 67
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=36.30 E-value=17 Score=22.16 Aligned_cols=17 Identities=35% Similarity=0.403 Sum_probs=14.7
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.|+..|+.++|++|+++
T Consensus 18 ~A~~~g~~~~v~~Ll~~ 34 (156)
T 1bi7_B 18 TAAARGRVEEVRALLEA 34 (156)
T ss_dssp HHHHHTCHHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHHc
Confidence 48889999999999975
No 68
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=35.96 E-value=20 Score=23.07 Aligned_cols=16 Identities=25% Similarity=0.453 Sum_probs=9.3
Q ss_pred hhhhhHHHHHHHHhhc
Q psy9898 3 AAERTQAEVVEFLVHK 18 (82)
Q Consensus 3 Aa~~g~~~Ive~Li~~ 18 (82)
||..|+.++|++|+++
T Consensus 113 A~~~~~~~~v~~Ll~~ 128 (222)
T 3ehr_A 113 ACHGGHKDIVEMLFTQ 128 (222)
T ss_dssp HHHTTCHHHHHHHTTS
T ss_pred HHHcCCHHHHHHHHcC
Confidence 5555666666666554
No 69
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=35.81 E-value=13 Score=25.58 Aligned_cols=18 Identities=22% Similarity=0.351 Sum_probs=16.0
Q ss_pred hhhhhhHHHHHHHHhhcc
Q psy9898 2 SAAERTQAEVVEFLVHKS 19 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~~ 19 (82)
.||..|+.++|++|++..
T Consensus 17 ~A~~~G~~~~v~~LL~~~ 34 (269)
T 4b93_B 17 RAVADGDLEMVRYLLEWT 34 (269)
T ss_dssp HHHHTTCHHHHHHHHTCC
T ss_pred HHHHcCCHHHHHHHHHCC
Confidence 589999999999999764
No 70
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=35.49 E-value=15 Score=22.10 Aligned_cols=16 Identities=50% Similarity=0.661 Sum_probs=9.7
Q ss_pred hhhhhHHHHHHHHhhc
Q psy9898 3 AAERTQAEVVEFLVHK 18 (82)
Q Consensus 3 Aa~~g~~~Ive~Li~~ 18 (82)
|+..|+.++|++|+++
T Consensus 110 A~~~~~~~~v~~Ll~~ 125 (162)
T 1ihb_A 110 AAKEGHLRVVEFLVKH 125 (162)
T ss_dssp HHHTTCHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHc
Confidence 5556666666666654
No 71
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=35.44 E-value=17 Score=23.63 Aligned_cols=17 Identities=35% Similarity=0.128 Sum_probs=13.2
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.||..|+.++|++|+++
T Consensus 51 ~A~~~g~~~~v~~Ll~~ 67 (282)
T 1oy3_D 51 LAAILGEASTVEKLYAA 67 (282)
T ss_dssp HHHHHTCHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHc
Confidence 47778888888888875
No 72
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=35.43 E-value=99 Score=20.85 Aligned_cols=34 Identities=15% Similarity=0.079 Sum_probs=23.6
Q ss_pred HHHHHHHHHHhCcccccccccccHHHHHHHHHHHHHhH
Q psy9898 23 IEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQLR 60 (82)
Q Consensus 23 ~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~lR 60 (82)
....++++.-+|-.|.. . +...|+.++++|+.+.
T Consensus 112 ~~~~a~~~~~lg~~~~~-g---~~~~A~~~~~~Al~~~ 145 (307)
T 2ifu_A 112 PDTAAMALDRAGKLMEP-L---DLSKAVHLYQQAAAVF 145 (307)
T ss_dssp HHHHHHHHHHHHHHHTT-T---CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHc-C---CHHHHHHHHHHHHHHH
Confidence 33456777777777755 3 6677888888887763
No 73
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=35.43 E-value=57 Score=22.12 Aligned_cols=35 Identities=14% Similarity=0.178 Sum_probs=26.8
Q ss_pred CHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHHh
Q psy9898 22 TIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQL 59 (82)
Q Consensus 22 s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~l 59 (82)
+......++-.+|..|.... +...|+.++++|+.+
T Consensus 81 ~~~~~~~~~~~lg~~~~~~g---~~~~A~~~~~~al~~ 115 (411)
T 4a1s_A 81 DLRTLSAIYSQLGNAYFYLG---DYNKAMQYHKHDLTL 115 (411)
T ss_dssp CHHHHHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHH
Confidence 45566678888888887654 778888888888876
No 74
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=35.26 E-value=31 Score=21.32 Aligned_cols=29 Identities=14% Similarity=0.004 Sum_probs=16.3
Q ss_pred HHHHhCcccccccccccHHHHHHHHHHHHHhH
Q psy9898 29 ALELLGASFANDKENYCLTSAFKYLYKTMQLR 60 (82)
Q Consensus 29 ALELLGATf~dkk~~~D~~~A~~~Wr~AM~lR 60 (82)
++-.+|-.|.... +...|+.++++|+.+-
T Consensus 40 ~~~~~~~~~~~~~---~~~~A~~~~~~a~~~~ 68 (258)
T 3uq3_A 40 YLNNRAAAEYEKG---EYETAISTLNDAVEQG 68 (258)
T ss_dssp HHHHHHHHHHHTT---CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcc---cHHHHHHHHHHHHHhC
Confidence 3444444444433 5667777777776653
No 75
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=35.21 E-value=18 Score=21.79 Aligned_cols=17 Identities=24% Similarity=0.204 Sum_probs=13.9
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.|+..|+.++|++|++.
T Consensus 40 ~A~~~~~~~~v~~Ll~~ 56 (153)
T 1awc_B 40 LAAQYGHFSTTEVLLRA 56 (153)
T ss_dssp HHHHHTCHHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHHc
Confidence 47888888888888875
No 76
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=35.20 E-value=83 Score=21.06 Aligned_cols=35 Identities=14% Similarity=0.034 Sum_probs=26.2
Q ss_pred HHHHHHHHHHhCcccccc-cccccHHHHHHHHHHHHHhH
Q psy9898 23 IEEKIDALELLGASFAND-KENYCLTSAFKYLYKTMQLR 60 (82)
Q Consensus 23 ~~~rIdALELLGATf~dk-k~~~D~~~A~~~Wr~AM~lR 60 (82)
...-+.++.-+|-.|.+. . +...|+.++++|+.+.
T Consensus 113 ~~~~a~~~~~lg~~~~~~lg---~~~~A~~~~~~Al~~~ 148 (292)
T 1qqe_A 113 FRRGANFKFELGEILENDLH---DYAKAIDCYELAGEWY 148 (292)
T ss_dssp HHHHHHHHHHHHHHHHHTTC---CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhc---CHHHHHHHHHHHHHHH
Confidence 334467888888888775 4 6778888998888763
No 77
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=35.20 E-value=18 Score=22.47 Aligned_cols=17 Identities=18% Similarity=0.352 Sum_probs=11.1
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.|+..|+.++|++|+++
T Consensus 45 ~A~~~~~~~~v~~Ll~~ 61 (201)
T 3hra_A 45 IAVHNNDIEIAKALIDR 61 (201)
T ss_dssp HHHHHTCHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHc
Confidence 36666777777777664
No 78
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=35.04 E-value=15 Score=22.46 Aligned_cols=17 Identities=29% Similarity=0.274 Sum_probs=13.3
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.|+..|+.++|++|+++
T Consensus 42 ~A~~~~~~~~v~~Ll~~ 58 (172)
T 3v30_A 42 WASAFGEIETVRFLLEW 58 (172)
T ss_dssp HHHHTTCHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHc
Confidence 47788888888888865
No 79
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=34.99 E-value=29 Score=30.46 Aligned_cols=29 Identities=21% Similarity=0.216 Sum_probs=20.0
Q ss_pred HHHHHHhhccCCCHHHHHHHHHHhCccccccc
Q psy9898 10 EVVEFLVHKSGVTIEEKIDALELLGASFANDK 41 (82)
Q Consensus 10 ~Ive~Li~~~~~s~~~rIdALELLGATf~dkk 41 (82)
++.+.|..-+ +-+-.|||||||..|.|..
T Consensus 612 e~~~lL~~W~---~i~p~~ALeLL~~~f~d~~ 640 (1092)
T 2y3a_A 612 QLQALLQIWP---KLPPREALELLDFNYPDQY 640 (1092)
T ss_dssp HHHHHHHTSC---CCCHHHHGGGGSTTCCCTT
T ss_pred HHHHHHccCC---CCCHHHHHHhcCccCCCHH
Confidence 4455555443 3345799999999998765
No 80
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=34.50 E-value=37 Score=29.91 Aligned_cols=38 Identities=16% Similarity=0.164 Sum_probs=24.8
Q ss_pred HHHHHHhhccCCCHHHHHHHHHHhCcccccccccccHHHHHHHH
Q psy9898 10 EVVEFLVHKSGVTIEEKIDALELLGASFANDKENYCLTSAFKYL 53 (82)
Q Consensus 10 ~Ive~Li~~~~~s~~~rIdALELLGATf~dkk~~~D~~~A~~~W 53 (82)
++.+.|..=+ +-+-.|||||||..|.|.. =-.-|+++.
T Consensus 605 e~~~LL~~W~---~i~~~~ALeLL~~~f~d~~---VR~yAV~~L 642 (1091)
T 3hhm_A 605 QMYCLVKDWP---PIKPEQAMELLDCNYPDPM---VRGFAVRCL 642 (1091)
T ss_dssp HHHHHHHTCC---CCCHHHHHHTTSTTCCCHH---HHHHHHHHH
T ss_pred HHHHHHhcCC---CCCHHHHHHhCcccCCCHH---HHHHHHHHH
Confidence 4555554433 3445799999999998654 235566666
No 81
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=34.35 E-value=74 Score=21.54 Aligned_cols=36 Identities=22% Similarity=0.125 Sum_probs=29.3
Q ss_pred CHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHHhH
Q psy9898 22 TIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQLR 60 (82)
Q Consensus 22 s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~lR 60 (82)
.+.....++..||-.|.... |...|+.++++|+.+.
T Consensus 338 ~~~~~~~~~~~la~~~~~~g---~~~~A~~~~~~al~~~ 373 (411)
T 4a1s_A 338 DRIGEARACWSLGNAHSAIG---GHERALKYAEQHLQLA 373 (411)
T ss_dssp CHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHC
T ss_pred ChHHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHH
Confidence 35566788999998887665 8899999999999873
No 82
>2hwv_A DNA-binding response regulator VICR; essential response regulator, C-terminal domain, DNA-binding transcription; 1.90A {Enterococcus faecalis}
Probab=34.03 E-value=85 Score=19.46 Aligned_cols=46 Identities=17% Similarity=0.330 Sum_probs=33.9
Q ss_pred HHHHHHHhhccC--CCHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHH
Q psy9898 9 AEVVEFLVHKSG--VTIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQ 58 (82)
Q Consensus 9 ~~Ive~Li~~~~--~s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~ 58 (82)
.+++++|+.+++ +|+++.++++ -|-.+.... +.+...+.-+|+.+.
T Consensus 49 ~~LL~~L~~~~g~vvsre~L~~~v--W~~~~~~~~--~tl~~~I~rLRkkL~ 96 (121)
T 2hwv_A 49 FELLYYLAKHIGQVMTREHLLQTV--WGYDYFGDV--RTVDVTVRRLREKIE 96 (121)
T ss_dssp HHHHHHHHHTTTCCBCHHHHHHHH--TCGGGTTCH--HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCeEEcHHHHHHHH--cCCCCCCCc--cHHHHHHHHHHHHHh
Confidence 478999999986 6999998876 455432223 477888888888874
No 83
>1opc_A OMPR, OMPRC; transcription regulation, response regulator, winged helix, osmoregulation; 1.95A {Escherichia coli} SCOP: a.4.6.1 PDB: 1odd_A 2jpb_A
Probab=33.79 E-value=77 Score=18.89 Aligned_cols=46 Identities=11% Similarity=0.211 Sum_probs=34.1
Q ss_pred HHHHHHHhhccC--CCHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHH
Q psy9898 9 AEVVEFLVHKSG--VTIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQ 58 (82)
Q Consensus 9 ~~Ive~Li~~~~--~s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~ 58 (82)
.+++++|+.+++ +|+++.++++ -|-.+.... +.+...+.-+|+.+.
T Consensus 37 ~~lL~~L~~~~g~~vsr~~L~~~v--W~~~~~~~~--~~l~~~I~rLRkkL~ 84 (110)
T 1opc_A 37 FAVLKALVSHPREPLSRDKLMNLA--RGREYSAME--RSIDVQISRLRRMVE 84 (110)
T ss_dssp HHHHHHHHHSTTCCEEHHHHHHHH--CCSSSCTTS--SCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCceEcHHHHHHHH--cCCCCCCCc--chHHHHHHHHHHHhh
Confidence 478999999986 6999998765 454432223 478889999998875
No 84
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=33.49 E-value=20 Score=22.71 Aligned_cols=17 Identities=18% Similarity=0.239 Sum_probs=13.1
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.||..|+.++|++|+++
T Consensus 31 ~A~~~g~~~~v~~Ll~~ 47 (223)
T 2f8y_A 31 LAARYSRSDAAKRLLEA 47 (223)
T ss_dssp HHHHTTCHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHc
Confidence 47778888888888765
No 85
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=33.30 E-value=20 Score=22.50 Aligned_cols=17 Identities=18% Similarity=0.131 Sum_probs=14.3
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.||..|+.++|++|+++
T Consensus 82 ~A~~~~~~~~v~~Ll~~ 98 (183)
T 3deo_A 82 FVAGLGSDKCVRLLAEA 98 (183)
T ss_dssp HHHHHTCHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHc
Confidence 47888999999999875
No 86
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=33.29 E-value=20 Score=21.75 Aligned_cols=17 Identities=47% Similarity=0.552 Sum_probs=13.6
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.|+..|+.++|++|+++
T Consensus 42 ~A~~~~~~~~v~~Ll~~ 58 (167)
T 3v31_A 42 WAAAHGQIAVVEFLLQN 58 (167)
T ss_dssp HHHHTTCHHHHHHHHHT
T ss_pred HHHHCCCHHHHHHHHHc
Confidence 47788888888888875
No 87
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=33.15 E-value=19 Score=24.07 Aligned_cols=17 Identities=29% Similarity=0.387 Sum_probs=12.7
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.|+..|+.+||++|+++
T Consensus 97 ~A~~~g~~~iv~~Ll~~ 113 (351)
T 3utm_A 97 NACSYGHYEVTELLLKH 113 (351)
T ss_dssp HHHHTTCHHHHHHHHHT
T ss_pred HHHHCCCHHHHHHHHHC
Confidence 46777788888888765
No 88
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=33.08 E-value=16 Score=24.17 Aligned_cols=18 Identities=17% Similarity=0.381 Sum_probs=15.9
Q ss_pred hhhhhhHHHHHHHHhhcc
Q psy9898 2 SAAERTQAEVVEFLVHKS 19 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~~ 19 (82)
.|+..|+.+||++|+++-
T Consensus 239 ~A~~~g~~~iv~~Ll~~g 256 (273)
T 2pnn_A 239 LAASSGKIGVLAYILQRE 256 (273)
T ss_dssp HHHHTTCHHHHHHHHHHH
T ss_pred HHHHhChHHHHHHHHHCC
Confidence 588999999999999864
No 89
>1gxq_A PHOB, phosphate regulon transcriptional regulatory protein; transcriptional activator, helix-winged-helix, sensory transduction; 2.0A {Escherichia coli} SCOP: a.4.6.1 PDB: 1gxp_A 1qqi_A 2z33_A 3t72_A
Probab=32.78 E-value=79 Score=18.75 Aligned_cols=46 Identities=11% Similarity=0.270 Sum_probs=34.1
Q ss_pred HHHHHHHhhccC--CCHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHH
Q psy9898 9 AEVVEFLVHKSG--VTIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQ 58 (82)
Q Consensus 9 ~~Ive~Li~~~~--~s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~ 58 (82)
.+++++|+.+++ +|+++.++++ -|-.+.... +.+...+...|+.+.
T Consensus 37 ~~lL~~L~~~~g~vvsr~~L~~~v--W~~~~~~~~--~~l~~~I~rLRkkL~ 84 (106)
T 1gxq_A 37 FKLLHFFMTHPERVYSREQLLNHV--WGTNVYVED--RTVDVHIRRLRKALE 84 (106)
T ss_dssp HHHHHHHHHSCSSEECHHHHHHHH--TCSSSCCCT--HHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHCCCeeEcHHHHHHHH--cCCCCCCCc--ccHHHHHHHHHHHhc
Confidence 578999999987 5999998876 354432223 478888898998885
No 90
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=32.66 E-value=19 Score=25.09 Aligned_cols=17 Identities=24% Similarity=0.247 Sum_probs=15.6
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.||..|+.+||++|+++
T Consensus 137 ~Aa~~g~~~~v~~Ll~~ 153 (327)
T 1sw6_A 137 WLTSIANLELVKHLVKH 153 (327)
T ss_dssp HHHHTTCHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHc
Confidence 58999999999999986
No 91
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=32.58 E-value=21 Score=22.81 Aligned_cols=17 Identities=29% Similarity=0.493 Sum_probs=12.7
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.||..|+.++|++|+++
T Consensus 17 ~A~~~g~~~~v~~Ll~~ 33 (237)
T 3b7b_A 17 AAAEAGHVDICHMLVQA 33 (237)
T ss_dssp HHHHHTCHHHHHHHHHT
T ss_pred HHHHcCcHHHHHHHHHc
Confidence 46777888888888765
No 92
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=32.55 E-value=21 Score=22.10 Aligned_cols=17 Identities=24% Similarity=0.305 Sum_probs=13.3
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.|+..|+.++|++|+++
T Consensus 78 ~A~~~~~~~~v~~Ll~~ 94 (179)
T 3f6q_A 78 LAASHGHRDIVQKLLQY 94 (179)
T ss_dssp HHHHTTCHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHc
Confidence 47778888888888865
No 93
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=32.35 E-value=33 Score=19.92 Aligned_cols=34 Identities=21% Similarity=0.249 Sum_probs=27.3
Q ss_pred HHHHHHHHHhCcccccccccccHHHHHHHHHHHHHhH
Q psy9898 24 EEKIDALELLGASFANDKENYCLTSAFKYLYKTMQLR 60 (82)
Q Consensus 24 ~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~lR 60 (82)
..+.+.++.||-+|..-. +...|+.+..+|..+.
T Consensus 43 ~~~~~i~~~L~~~~~~~g---~~~~A~~~~~~al~l~ 76 (104)
T 2v5f_A 43 IDKVSVLDYLSYAVYQQG---DLDKALLLTKKLLELD 76 (104)
T ss_dssp SCHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHHHHHHHcc---CHHHHHHHHHHHHhcC
Confidence 356788999998886444 8899999999998753
No 94
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=32.35 E-value=64 Score=21.68 Aligned_cols=35 Identities=26% Similarity=0.188 Sum_probs=28.9
Q ss_pred CHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHHh
Q psy9898 22 TIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQL 59 (82)
Q Consensus 22 s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~l 59 (82)
+++++.|+|=.||-.+...+ |-..|.+|..+++++
T Consensus 66 ~p~~~rd~lY~LAv~~~kl~---~Y~~A~~y~~~lL~i 100 (152)
T 1pc2_A 66 SKEEQRDYVFYLAVGNYRLK---EYEKALKYVRGLLQT 100 (152)
T ss_dssp CHHHHHHHHHHHHHHHHHTS---CHHHHHHHHHHHHHH
T ss_pred CccchHHHHHHHHHHHHHcc---CHHHHHHHHHHHHhc
Confidence 36678899999999996655 788999999988876
No 95
>2z9m_A Response regulator YYCF; two-component system, YYCG, helix-turn- helix motif, DNA-binding domain, phosphorylation, transcription; 1.87A {Staphylococcus aureus} PDB: 2zxj_A 2d1v_A
Probab=32.20 E-value=88 Score=19.08 Aligned_cols=47 Identities=17% Similarity=0.346 Sum_probs=34.0
Q ss_pred HHHHHHHHhhccC--CCHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHH
Q psy9898 8 QAEVVEFLVHKSG--VTIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQ 58 (82)
Q Consensus 8 ~~~Ive~Li~~~~--~s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~ 58 (82)
-.+++++|+.+++ +|+++.++++ -|-.+.... +.+...+.-+|+.+.
T Consensus 41 E~~lL~~L~~~~g~vvsr~~L~~~v--W~~~~~~~~--~~l~~~I~rLRkkL~ 89 (120)
T 2z9m_A 41 EFELFHYLSKHMGQVMTREHLLQTV--WGYDYFGDV--RTVDVTIRRLREKIE 89 (120)
T ss_dssp HHHHHHHHHTTTTCCEEHHHHHHHH--HCTTCCSCT--HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCceEcHHHHHHHH--hCCCCCCCc--chHHHHHHHHHHHhh
Confidence 3578999999987 5999998875 354332223 467888888888875
No 96
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=32.11 E-value=30 Score=18.60 Aligned_cols=29 Identities=24% Similarity=0.387 Sum_probs=17.1
Q ss_pred HHHHHhCcccccccccccHHHHHHHHHHHHHh
Q psy9898 28 DALELLGASFANDKENYCLTSAFKYLYKTMQL 59 (82)
Q Consensus 28 dALELLGATf~dkk~~~D~~~A~~~Wr~AM~l 59 (82)
+++-.+|-.+.... +...|+.++++++.+
T Consensus 44 ~~~~~la~~~~~~~---~~~~A~~~~~~~~~~ 72 (125)
T 1na0_A 44 EAWYNLGNAYYKQG---DYDEAIEYYQKALEL 72 (125)
T ss_dssp HHHHHHHHHHHHTT---CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC---CHHHHHHHHHHHHHh
Confidence 44455555554433 566777777777654
No 97
>3q9v_A DNA-binding response regulator; response regulator protein, DNA binding protein; 1.60A {Deinococcus radiodurans}
Probab=31.98 E-value=88 Score=19.85 Aligned_cols=46 Identities=9% Similarity=0.223 Sum_probs=34.3
Q ss_pred HHHHHHHhhccC--CCHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHH
Q psy9898 9 AEVVEFLVHKSG--VTIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQ 58 (82)
Q Consensus 9 ~~Ive~Li~~~~--~s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~ 58 (82)
.+++++|+.+++ +|+++.++++ -|-.+.... +.+...+.-+|+.+.
T Consensus 66 ~~LL~~L~~~~g~vvsre~L~~~v--W~~~~~~~~--~~l~~~I~rLRkkL~ 113 (133)
T 3q9v_A 66 FDILALLIRQPGRVYSRQEIGQEI--WQGRLPEGS--NVVDVHMANLRAKLR 113 (133)
T ss_dssp HHHHHHHTTSTTCEEEHHHHHHHH--HTTCCCTTC--CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCceEcHHHHHHHH--cCCCCCCcH--HHHHHHHHHHHHHHh
Confidence 479999999987 5999998875 454442223 468888888888876
No 98
>3cqc_B Nuclear pore complex protein NUP133; nucleoporin, mRNA transport, nucleus, phosphoprotein, protein transport, translocation, polymorphism; 2.53A {Homo sapiens} PDB: 3cqg_B
Probab=31.81 E-value=36 Score=24.29 Aligned_cols=50 Identities=14% Similarity=0.127 Sum_probs=25.6
Q ss_pred HHHHHHHhhc--cCCCHHHHHHHHHHhCccccccccccc-HHHHHHHHHHHHHhHh
Q psy9898 9 AEVVEFLVHK--SGVTIEEKIDALELLGASFANDKENYC-LTSAFKYLYKTMQLRI 61 (82)
Q Consensus 9 ~~Ive~Li~~--~~~s~~~rIdALELLGATf~dkk~~~D-~~~A~~~Wr~AM~lR~ 61 (82)
.++|+.++.. ...+..+=..||+++--+--... .+ -..-..+||||| +|-
T Consensus 100 ~eLIdl~~~~~n~~~~e~~F~~AL~vl~~~~~~~~--~~~~~L~~~IWrRai-lrD 152 (227)
T 3cqc_B 100 PQLIGLYICEENRRANEYDFKKALDLLEYIDEEED--ININDLKLEILCKAL-QRD 152 (227)
T ss_dssp HHHHHHTSCTTCTTCCHHHHHHHTTTTTTCC------CCSHHHHHHHHHHHH-HTT
T ss_pred HHHHHHHhccccccccHHHHHHHHHHHHhccchhh--hHHHHHHHHHHHHHH-hhc
Confidence 5666666653 22344555577777533211111 11 122267999999 663
No 99
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=31.61 E-value=22 Score=22.95 Aligned_cols=17 Identities=24% Similarity=0.554 Sum_probs=12.8
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.|+..|+.++|++|+++
T Consensus 45 ~A~~~g~~~~v~~Ll~~ 61 (285)
T 1wdy_A 45 NAVQMSREDIVELLLRH 61 (285)
T ss_dssp HHHHTTCHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHc
Confidence 46777888888888765
No 100
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=31.11 E-value=39 Score=23.46 Aligned_cols=34 Identities=26% Similarity=0.292 Sum_probs=22.1
Q ss_pred HHHHHHHHHHhCcccccccccccHHHHHHHHHHHHHh
Q psy9898 23 IEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQL 59 (82)
Q Consensus 23 ~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~l 59 (82)
+.+.++++..+|-.+.... +...|+.++.+|+..
T Consensus 2 ~~~~a~~~~~~g~~~~~~g---~~~~A~~~~~~al~~ 35 (514)
T 2gw1_A 2 KDKYALALKDKGNQFFRNK---KYDDAIKYYNWALEL 35 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTS---CHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhc---cHHHHHHHHHHHHhc
Confidence 4456667777777666655 566677777766654
No 101
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=31.02 E-value=22 Score=23.56 Aligned_cols=17 Identities=29% Similarity=0.499 Sum_probs=11.1
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.||..|+.++|++|+++
T Consensus 79 ~A~~~g~~~~v~~Ll~~ 95 (299)
T 1s70_B 79 QACIDDNVDMVKFLVEN 95 (299)
T ss_dssp HHHHTTCHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHC
Confidence 36666777777777654
No 102
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=30.98 E-value=35 Score=18.07 Aligned_cols=30 Identities=10% Similarity=0.044 Sum_probs=23.6
Q ss_pred HHHHHHhCcccccccccccHHHHHHHHHHHHHh
Q psy9898 27 IDALELLGASFANDKENYCLTSAFKYLYKTMQL 59 (82)
Q Consensus 27 IdALELLGATf~dkk~~~D~~~A~~~Wr~AM~l 59 (82)
.+++-.+|..|.... +...|+.++.+|+.+
T Consensus 40 ~~~~~~~a~~~~~~~---~~~~A~~~~~~a~~~ 69 (112)
T 2kck_A 40 SKYWLMKGKALYNLE---RYEEAVDCYNYVINV 69 (112)
T ss_dssp HHHHHHHHHHHHHTT---CHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcc---CHHHHHHHHHHHHHh
Confidence 356777888877665 778999999999875
No 103
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=30.91 E-value=22 Score=23.65 Aligned_cols=17 Identities=18% Similarity=0.131 Sum_probs=13.8
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.||..|+.++|++|+++
T Consensus 83 ~A~~~g~~~~v~~Ll~~ 99 (244)
T 3ui2_A 83 FVAGLGSDKCVRLLAEA 99 (244)
T ss_dssp HHHHHTCHHHHHHHHHT
T ss_pred HHHHCCCHHHHHHHHHc
Confidence 47888888888888875
No 104
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=30.89 E-value=23 Score=22.49 Aligned_cols=17 Identities=35% Similarity=0.501 Sum_probs=12.5
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.|+..|+.++|++|+++
T Consensus 46 ~A~~~g~~~~v~~Ll~~ 62 (231)
T 3aji_A 46 WACSAGHTEIVEFLLQL 62 (231)
T ss_dssp HHHHHTCHHHHHHHHHT
T ss_pred HHHHcCcHHHHHHHHHh
Confidence 46777778888887765
No 105
>3zqp_A Terminase small subunit; DNA-binding protein, DNA packaging; 3.00A {Bacillus phage SF6} PDB: 3zqq_A
Probab=30.75 E-value=21 Score=24.78 Aligned_cols=21 Identities=48% Similarity=0.841 Sum_probs=16.4
Q ss_pred CCHHHHHHHHHHhC---ccccccc
Q psy9898 21 VTIEEKIDALELLG---ASFANDK 41 (82)
Q Consensus 21 ~s~~~rIdALELLG---ATf~dkk 41 (82)
++..+|+.|+|||| .-|.||.
T Consensus 124 ~~~~driKAlelLgK~~g~ftdKv 147 (164)
T 3zqp_A 124 VSAKDRIKALELLGKAHAVFTDKQ 147 (164)
T ss_dssp CCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCHHHHHHHHHHHHHHcccchhhh
Confidence 57899999999999 4455554
No 106
>2pmu_A Response regulator PHOP; winged helix-TUN-HELX, transcription regulation; 1.78A {Mycobacterium tuberculosis}
Probab=30.66 E-value=90 Score=18.73 Aligned_cols=46 Identities=17% Similarity=0.370 Sum_probs=34.2
Q ss_pred HHHHHHHhhccC--CCHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHH
Q psy9898 9 AEVVEFLVHKSG--VTIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQ 58 (82)
Q Consensus 9 ~~Ive~Li~~~~--~s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~ 58 (82)
.+++++|+.+++ +|+++.++++ -|-.+.... +.+...+..+|+.+.
T Consensus 40 ~~lL~~L~~~~g~~vsr~~L~~~v--W~~~~~~~~--~~l~~~I~rLRkkL~ 87 (110)
T 2pmu_A 40 FTLLRYFVINAGTVLSKPKILDHV--WRYDFGGDV--NVVESYVSYLRRKID 87 (110)
T ss_dssp HHHHHHHHHTTTSCBCHHHHHHHH--SCTTCCSSS--CHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHCCCEEEcHHHHHHHH--cCCCCCCcc--chHHHHHHHHHHHhc
Confidence 478999999986 6999998765 454442223 478888999998885
No 107
>3zq7_A KDP operon transcriptional regulatory protein KDP; response regulator; 2.52A {Escherichia coli}
Probab=30.35 E-value=80 Score=18.48 Aligned_cols=47 Identities=13% Similarity=0.271 Sum_probs=33.1
Q ss_pred HHHHHHHHhhccC--CCHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHH
Q psy9898 8 QAEVVEFLVHKSG--VTIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQ 58 (82)
Q Consensus 8 ~~~Ive~Li~~~~--~s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~ 58 (82)
..+++++|+.+++ +|+++.++++ -|....... +.+...+.-+|+.+.
T Consensus 33 e~~lL~~L~~~~g~~vsr~~L~~~v--w~~~~~~~~--~~l~~~I~rLRkkL~ 81 (102)
T 3zq7_A 33 EFRLLAVLLNNAGKVLTQRQLLNQV--WGPNAVEHS--HYLRIYMGHLRQKLE 81 (102)
T ss_dssp HHHHHHHHHHTTTCEEEHHHHHHHH--TSSSCSTTH--HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCeeECHHHHHHHh--cCCCCCCcc--chHHHHHHHHHHHhh
Confidence 3579999999987 5999998865 353332222 367777888888775
No 108
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=29.70 E-value=24 Score=23.20 Aligned_cols=17 Identities=35% Similarity=0.499 Sum_probs=13.2
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.||..|+.+||++|+++
T Consensus 109 ~A~~~~~~~~v~~Ll~~ 125 (239)
T 1ycs_B 109 CAASCNNVQVCKFLVES 125 (239)
T ss_dssp HHHHTTCHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHc
Confidence 47778888888888775
No 109
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=29.69 E-value=85 Score=23.76 Aligned_cols=38 Identities=11% Similarity=-0.095 Sum_probs=29.2
Q ss_pred CHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHHhHhC
Q psy9898 22 TIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQLRIG 62 (82)
Q Consensus 22 s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~lR~~ 62 (82)
........+.-||.+|.+.. +...|..+.++|+.++-.
T Consensus 335 ~Hp~~a~~~~nLa~~y~~~g---~~~eA~~~~~~aL~i~~~ 372 (433)
T 3qww_A 335 SNVYMLHMMYQAMGVCLYMQ---DWEGALKYGQKIIKPYSK 372 (433)
T ss_dssp TSHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHH
T ss_pred hchHHHHHHHHHHHHHHhhc---CHHHHHHHHHHHHHHHHH
Confidence 45566677777777776654 778999999999999763
No 110
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=29.58 E-value=25 Score=22.35 Aligned_cols=17 Identities=35% Similarity=0.292 Sum_probs=13.8
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.|+..|+.++|++|+++
T Consensus 52 ~A~~~~~~~~v~~Ll~~ 68 (241)
T 1k1a_A 52 LAVITTLPSVVRLLVTA 68 (241)
T ss_dssp HHHHTTCHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHc
Confidence 47788888888888875
No 111
>2nug_A Ribonuclease III, RNAse III; dsRNA, RNA interference, endonucleolytic cleavage, hydrolase/RNA complex; 1.70A {Aquifex aeolicus} SCOP: a.149.1.1 d.50.1.1 PDB: 1yyw_A 2nue_A 2nuf_A 1yyk_A 1yz9_A 1yyo_A 2ez6_A 1rc7_A 1i4s_A 1jfz_A 1rc5_A
Probab=29.17 E-value=37 Score=23.27 Aligned_cols=33 Identities=18% Similarity=0.126 Sum_probs=21.9
Q ss_pred HHHHHHHHHHh-CcccccccccccHHHHHHHHHHHH
Q psy9898 23 IEEKIDALELL-GASFANDKENYCLTSAFKYLYKTM 57 (82)
Q Consensus 23 ~~~rIdALELL-GATf~dkk~~~D~~~A~~~Wr~AM 57 (82)
..-..|++|-+ ||-|+|.- .|...+-++..+-+
T Consensus 102 ~~~lad~~EAliGAiyld~g--~~~~~~~~~i~~~~ 135 (221)
T 2nug_A 102 ETIIGDVFEALWAAVYIDSG--RDANFTRELFYKLF 135 (221)
T ss_dssp HHHHHHHHHHHHHHHHHHTT--SCHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHH
Confidence 44456888865 99999986 66644555554444
No 112
>2zxj_A Transcriptional regulatory protein WALR; two-component system, YYCG, response regulator, helix-turn-H motif, DNA-binding domain; 1.87A {Staphylococcus aureus} PDB: 2d1v_A
Probab=29.07 E-value=1.1e+02 Score=19.27 Aligned_cols=46 Identities=17% Similarity=0.341 Sum_probs=34.2
Q ss_pred HHHHHHHhhccC--CCHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHH
Q psy9898 9 AEVVEFLVHKSG--VTIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQ 58 (82)
Q Consensus 9 ~~Ive~Li~~~~--~s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~ 58 (82)
.+++++|+.+++ +|+++.++++ -|-.+..+. +.+...+.-.|+.+.
T Consensus 42 ~~lL~~L~~~~g~vvsre~L~~~v--Wg~~~~~~~--~~l~v~I~rLRkKL~ 89 (120)
T 2zxj_A 42 FELFHYLSKHMGQVMTREHLLQTV--WGYDYFGDV--RTVDVTIRRLREKIE 89 (120)
T ss_dssp HHHHHHHHTTTTCCBCHHHHHHHH--HCTTCCSCT--HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCCCceEcHHHHHHHh--cCCCCCCCC--cChHHHHHHHHHHHh
Confidence 578999999987 5999998875 465544444 467788888888775
No 113
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=29.00 E-value=37 Score=20.45 Aligned_cols=31 Identities=19% Similarity=0.294 Sum_probs=24.9
Q ss_pred HHHHHHhCcccccccccccHHHHHHHHHHHHHhH
Q psy9898 27 IDALELLGASFANDKENYCLTSAFKYLYKTMQLR 60 (82)
Q Consensus 27 IdALELLGATf~dkk~~~D~~~A~~~Wr~AM~lR 60 (82)
.+++-.+|-.|.... +...|+.++++|+.+.
T Consensus 44 ~~~~~~lg~~~~~~~---~~~~A~~~~~~al~~~ 74 (177)
T 2e2e_A 44 SEQWALLGEYYLWQN---DYSNSLLAYRQALQLR 74 (177)
T ss_dssp HHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC---CHHHHHHHHHHHHHcC
Confidence 468888888887766 7788999999988764
No 114
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=28.71 E-value=1.3e+02 Score=19.91 Aligned_cols=32 Identities=9% Similarity=-0.012 Sum_probs=24.3
Q ss_pred HHHHHHhCcccccccccccHHHHHHHHHHHHHhHh
Q psy9898 27 IDALELLGASFANDKENYCLTSAFKYLYKTMQLRI 61 (82)
Q Consensus 27 IdALELLGATf~dkk~~~D~~~A~~~Wr~AM~lR~ 61 (82)
+.-+..+|..+.+.. +...|+.++.+|+.+..
T Consensus 115 ~~~~~~l~~~~~~~~---~~~~Ai~~~~~al~~~~ 146 (293)
T 3u3w_A 115 LQWQYYVAAYVLKKV---DYEYCILELKKLLNQQL 146 (293)
T ss_dssp HHHHHHHHHHHTTSS---CHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHccc---CHHHHHHHHHHHHHHhc
Confidence 455667888876554 77899999999998543
No 115
>2k4j_A Putative transcriptional regulator; response regulator, acid resistance, DN binding, phosphoprotein, transcription regul; NMR {Helicobacter pylori}
Probab=28.31 E-value=87 Score=19.21 Aligned_cols=46 Identities=13% Similarity=0.142 Sum_probs=33.7
Q ss_pred HHHHHHHhhccC--CCHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHH
Q psy9898 9 AEVVEFLVHKSG--VTIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQ 58 (82)
Q Consensus 9 ~~Ive~Li~~~~--~s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~ 58 (82)
.+++++|+.+++ +|+++.++++ -|-.+.... +.+...+.-+|+.+.
T Consensus 47 ~~LL~~L~~~~g~vvsre~L~~~v--W~~~~~~~~--~tl~~~I~rLRkkL~ 94 (115)
T 2k4j_A 47 YEILSLLISKKGYVFSRESIAIES--ESINPESSN--KSIDVIIGRLRSKIE 94 (115)
T ss_dssp HHHHHHHHHHCCCEECHHHHHHHT--CCSSCTTCH--HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcEEcHHHHHHHH--cCCCCCCch--hHHHHHHHHHHHHhh
Confidence 478999999887 6999998765 454432222 467888888888875
No 116
>2cp9_A EF-TS, EF-TSMT, elongation factor TS, mitochondrial; UBA, structural genomics, human, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.2
Probab=28.26 E-value=96 Score=18.32 Aligned_cols=38 Identities=29% Similarity=0.194 Sum_probs=27.6
Q ss_pred HHHHHHhhccCCCHHHHHHHHHHhCcccccccccccHHHHHHHHHHH
Q psy9898 10 EVVEFLVHKSGVTIEEKIDALELLGASFANDKENYCLTSAFKYLYKT 56 (82)
Q Consensus 10 ~Ive~Li~~~~~s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~A 56 (82)
+.|..|..+.+++-.+-..||+-- |.|+..|+.++|+=
T Consensus 11 ~~Vk~LRe~TGag~~dcKkAL~e~---------~GDi~~Ai~~Lr~k 48 (64)
T 2cp9_A 11 ELLMKLRRKTGYSFVNCKKALETC---------GGDLKQAEIWLHKE 48 (64)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHH---------TSCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHc---------CCCHHHHHHHHHHH
Confidence 456677777777777777777632 36999999999853
No 117
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=28.09 E-value=28 Score=21.69 Aligned_cols=17 Identities=24% Similarity=0.305 Sum_probs=11.7
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.|+..|+.++|++|+++
T Consensus 140 ~A~~~~~~~~v~~Ll~~ 156 (192)
T 2rfm_A 140 VASKYGRSEIVKKLLEL 156 (192)
T ss_dssp HHHHHTCHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHC
Confidence 36667777777777764
No 118
>1tr8_A Conserved protein (MTH177); chaperones, nascent polypeptide-associated complex, ribosome domain, ubiquitin, chaperone; 2.27A {Methanothermobacter marburgensis}
Probab=28.06 E-value=37 Score=21.69 Aligned_cols=34 Identities=21% Similarity=0.299 Sum_probs=26.4
Q ss_pred HHHHHHhhccCCCHHHHHHHHHHhCcccccccccccHHHHHHH
Q psy9898 10 EVVEFLVHKSGVTIEEKIDALELLGASFANDKENYCLTSAFKY 52 (82)
Q Consensus 10 ~Ive~Li~~~~~s~~~rIdALELLGATf~dkk~~~D~~~A~~~ 52 (82)
+=++.+.++.++|+++-+.||+= .|.|+..|+-+
T Consensus 67 edi~lv~~q~~vs~~~A~~aL~~---------~~gDiv~Ai~~ 100 (102)
T 1tr8_A 67 DDIELVMNQTGASREDATRALQE---------TGGDLAEAIMR 100 (102)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHH---------TTTCHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHH---------cCCCHHHHHHH
Confidence 44789999999999999999973 22577777654
No 119
>1wj7_A Hypothetical protein (RSGI RUH-015); UBA domain, ubiquitin associated domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.5.2.1
Probab=28.05 E-value=92 Score=20.20 Aligned_cols=41 Identities=24% Similarity=0.148 Sum_probs=29.1
Q ss_pred HHHHHHHHhhccCCCHHHHHHHHHHhCcccccccccccHHHHHHHHHHHH
Q psy9898 8 QAEVVEFLVHKSGVTIEEKIDALELLGASFANDKENYCLTSAFKYLYKTM 57 (82)
Q Consensus 8 ~~~Ive~Li~~~~~s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM 57 (82)
+.+-|+.|....++|.++-+.||+= .|.|+..|+.++....
T Consensus 39 ~eekVk~L~EmtG~seeeAr~AL~~---------~ngDl~~AI~~Lleg~ 79 (104)
T 1wj7_A 39 FEEKVKQLIDITGKNQDECVIALHD---------CNGDVNRAINVLLEGN 79 (104)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHH---------HTSCHHHHHHHHHTCS
T ss_pred HHHHHHHHHHhhCCCHHHHHHHHHH---------cCCCHHHHHHHHHhCC
Confidence 3445677777777788887777752 2379999999887554
No 120
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=27.85 E-value=28 Score=21.85 Aligned_cols=17 Identities=24% Similarity=0.405 Sum_probs=12.2
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.|+..|+.++|++|+++
T Consensus 48 ~A~~~~~~~~v~~Ll~~ 64 (240)
T 3eu9_A 48 WAAINNRIDLVKYYISK 64 (240)
T ss_dssp HHHHTTCHHHHHHHHHT
T ss_pred HHHHhCCHHHHHHHHHc
Confidence 46677777777777765
No 121
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=27.77 E-value=1.3e+02 Score=20.04 Aligned_cols=36 Identities=14% Similarity=0.038 Sum_probs=28.6
Q ss_pred CHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHHhH
Q psy9898 22 TIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQLR 60 (82)
Q Consensus 22 s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~lR 60 (82)
++.....++.-+|..|.... +...|+.++++|+.+.
T Consensus 72 ~~~~~a~~~~~lg~~~~~~g---~~~~A~~~~~~Al~l~ 107 (292)
T 1qqe_A 72 NEDEAGNTYVEAYKCFKSGG---NSVNAVDSLENAIQIF 107 (292)
T ss_dssp CHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHHH
Confidence 34556788888998887655 7789999999999874
No 122
>2hqn_A Putative transcriptional regulator; phosporylation-independent response regulator, signaling Pro; NMR {Helicobacter pylori}
Probab=27.73 E-value=81 Score=18.75 Aligned_cols=46 Identities=20% Similarity=0.236 Sum_probs=33.5
Q ss_pred HHHHHHHhhccC--CCHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHH
Q psy9898 9 AEVVEFLVHKSG--VTIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQ 58 (82)
Q Consensus 9 ~~Ive~Li~~~~--~s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~ 58 (82)
.+++++|+.+++ +|+++.++++ -|-.+.... +.+...+.-.|+.+.
T Consensus 35 ~~lL~~L~~~~g~~vsr~~L~~~v--W~~~~~~~~--~~l~~~I~rLRkkL~ 82 (109)
T 2hqn_A 35 FEVLTHLARHRDQIVSKEQLLDAI--WEEPEMVTP--NVIEVAINQIRQKMD 82 (109)
T ss_dssp HHHHHHHHHHTCSEEEHHHHHHHH--CCSCGGGCT--THHHHHHHHHHHHTT
T ss_pred HHHHHHHHHCCCeeEcHHHHHHHH--cCCCCCCCc--chHHHHHHHHHHHhc
Confidence 478999999887 5999998875 454332223 478888888888875
No 123
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=27.70 E-value=27 Score=24.79 Aligned_cols=17 Identities=18% Similarity=0.190 Sum_probs=12.1
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.||..|+.++|++|+++
T Consensus 20 ~Aa~~g~~~~v~~Ll~~ 36 (437)
T 1n11_A 20 VASFMGHLPIVKNLLQR 36 (437)
T ss_dssp HHHHHTCHHHHHHHHHT
T ss_pred HHHHCCCHHHHHHHHHc
Confidence 46777777777777764
No 124
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=27.55 E-value=28 Score=21.93 Aligned_cols=17 Identities=24% Similarity=0.327 Sum_probs=12.4
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.|+..|+.++|++|+++
T Consensus 42 ~A~~~~~~~~v~~Ll~~ 58 (228)
T 2dzn_A 42 WSVSFQAHEITSFLLSK 58 (228)
T ss_dssp HHHHTTCHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHhc
Confidence 46777777777777765
No 125
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=27.47 E-value=95 Score=23.88 Aligned_cols=38 Identities=11% Similarity=0.034 Sum_probs=28.0
Q ss_pred CHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHHhHhC
Q psy9898 22 TIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQLRIG 62 (82)
Q Consensus 22 s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~lR~~ 62 (82)
........+.-||.+|.+.. +...|..+.++|+.+|-.
T Consensus 346 ~Hp~~a~~~~nLa~~y~~~g---~~~eA~~~~~~aL~i~~~ 383 (490)
T 3n71_A 346 TNLYVLRLLSIASEVLSYLQ---AYEEASHYARRMVDGYMK 383 (490)
T ss_dssp TSHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHH
Confidence 44456666777777776554 678899999999999763
No 126
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=27.27 E-value=28 Score=23.09 Aligned_cols=17 Identities=24% Similarity=0.401 Sum_probs=12.0
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.||..|+.++|++|+++
T Consensus 60 ~A~~~g~~~~v~~Ll~~ 76 (229)
T 2vge_A 60 NAICGANYSIVDFLITA 76 (229)
T ss_dssp HHHHTTCHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHC
Confidence 46677777777777765
No 127
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=27.26 E-value=28 Score=24.10 Aligned_cols=17 Identities=29% Similarity=0.356 Sum_probs=13.1
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.||..|+.++|++|+++
T Consensus 26 ~Aa~~g~~~~v~~Ll~~ 42 (364)
T 3ljn_A 26 VAARKGQTDEVRRLIET 42 (364)
T ss_dssp HHHHHTCHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHc
Confidence 47778888888888765
No 128
>1zt2_B DNA primase large subunit; heterodimeric complex, replication, transferase; HET: DNA; 3.33A {Sulfolobus solfataricus} SCOP: a.262.1.1
Probab=27.10 E-value=18 Score=25.60 Aligned_cols=37 Identities=8% Similarity=0.089 Sum_probs=28.7
Q ss_pred cHHHHHHHHHHHHHhHhCC---CCCC-CcccchHHHHhhhc
Q psy9898 45 CLTSAFKYLYKTMQLRIGR---IIMT-PIYTTACVILQKLG 81 (82)
Q Consensus 45 D~~~A~~~Wr~AM~lR~~~---~i~K-~~~~~~~~~~~~~~ 81 (82)
+-....+.|++|..-|..+ ++|. .++.+-|.+|.+-|
T Consensus 171 ~k~el~rLl~Eai~~~i~~~i~~lp~~~vp~~i~~~l~~~~ 211 (212)
T 1zt2_B 171 DKNQLIGLIAESIKSKIVEMIRPLNLKEIPEKLKSLIERRG 211 (212)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTHHHHSSCCCHHHHHHHHC--
T ss_pred cHHHHHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHhcC
Confidence 5567889999999998885 7877 57778888887744
No 129
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=26.60 E-value=44 Score=19.73 Aligned_cols=30 Identities=13% Similarity=-0.053 Sum_probs=21.0
Q ss_pred HHHHHHhCcccccccccccHHHHHHHHHHHHHh
Q psy9898 27 IDALELLGASFANDKENYCLTSAFKYLYKTMQL 59 (82)
Q Consensus 27 IdALELLGATf~dkk~~~D~~~A~~~Wr~AM~l 59 (82)
.+++-.+|..|.... +...|+.++++|+.+
T Consensus 52 ~~~~~~lg~~~~~~g---~~~~A~~~~~~al~~ 81 (142)
T 2xcb_A 52 ARYFLGLGACRQSLG---LYEQALQSYSYGALM 81 (142)
T ss_dssp HHHHHHHHHHHHHTT---CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh---hHHHHHHHHHHHHhc
Confidence 356677777776554 667788888887765
No 130
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=26.36 E-value=30 Score=22.25 Aligned_cols=17 Identities=18% Similarity=0.307 Sum_probs=14.1
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.|+..|+.++|++|+++
T Consensus 157 ~A~~~~~~~~v~~Ll~~ 173 (236)
T 1ikn_D 157 LAVDLQNPDLVSLLLKC 173 (236)
T ss_dssp HHHHTTCHHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHHc
Confidence 47788899999999875
No 131
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=26.25 E-value=38 Score=22.96 Aligned_cols=16 Identities=25% Similarity=0.302 Sum_probs=8.8
Q ss_pred hhhhhHHHHHHHHhhc
Q psy9898 3 AAERTQAEVVEFLVHK 18 (82)
Q Consensus 3 Aa~~g~~~Ive~Li~~ 18 (82)
||..|+.++|++|+++
T Consensus 190 A~~~g~~~~v~~Ll~~ 205 (276)
T 4hbd_A 190 AVSHGRVDVVKALLAC 205 (276)
T ss_dssp HHHTTCHHHHHHHHHT
T ss_pred HHHcCCHHHHHHHHhC
Confidence 5555555555555543
No 132
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=26.22 E-value=41 Score=21.75 Aligned_cols=30 Identities=23% Similarity=0.389 Sum_probs=19.9
Q ss_pred HHHHHHhCccccc----ccccccHHHHHHHHHHHHHh
Q psy9898 27 IDALELLGASFAN----DKENYCLTSAFKYLYKTMQL 59 (82)
Q Consensus 27 IdALELLGATf~d----kk~~~D~~~A~~~Wr~AM~l 59 (82)
.+|+-.||-.|.+ .+ |...|+.++++|...
T Consensus 74 ~~a~~~lg~~~~~g~~~~~---~~~~A~~~~~~a~~~ 107 (273)
T 1ouv_A 74 SNGCHLLGNLYYSGQGVSQ---NTNKALQYYSKACDL 107 (273)
T ss_dssp HHHHHHHHHHHHHTSSSCC---CHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCCccc---CHHHHHHHHHHHHHc
Confidence 4566667776666 33 667777777777764
No 133
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=26.21 E-value=30 Score=22.70 Aligned_cols=17 Identities=18% Similarity=0.239 Sum_probs=13.4
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.||..|+.++|++|+++
T Consensus 63 ~A~~~g~~~~v~~Ll~~ 79 (253)
T 1yyh_A 63 LAARYSRSDAAKRLLEA 79 (253)
T ss_dssp HHHHTTCHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHc
Confidence 47778888888888875
No 134
>2jzy_A Transcriptional regulatory protein PCOR; two-component-system response regulator, effector domain, DNA-binding, phosphoprotein, plasmid; NMR {Klebsiella pneumoniae}
Probab=26.02 E-value=99 Score=18.71 Aligned_cols=46 Identities=15% Similarity=0.283 Sum_probs=32.9
Q ss_pred HHHHHHHhhccC--CCHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHH
Q psy9898 9 AEVVEFLVHKSG--VTIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQ 58 (82)
Q Consensus 9 ~~Ive~Li~~~~--~s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~ 58 (82)
.+++++|+.+++ +|+++.++++ -|-.+.... +.+...+.-.|+.+.
T Consensus 34 ~~lL~~L~~~~g~vvsre~L~~~v--W~~~~~~~~--~~l~~~I~rLRkkL~ 81 (112)
T 2jzy_A 34 YVLLELLLQRTGEVLPRSLISSLV--WNMNFDSDT--NVIDVAVRRLRSKID 81 (112)
T ss_dssp HHHHHHHHHTTTSCBCHHHHHHHH--TCCCSSCST--THHHHHHHHHHTTTT
T ss_pred HHHHHHHHHCCCceEcHHHHHHHh--cCCCCCCCc--chHHHHHHHHHHHhc
Confidence 478999999887 6999998765 455442223 467788888777763
No 135
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=25.10 E-value=33 Score=22.70 Aligned_cols=17 Identities=18% Similarity=0.130 Sum_probs=12.3
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.||..|+.++|++|+++
T Consensus 9 ~A~~~g~~~~v~~Ll~~ 25 (261)
T 2xai_A 9 EAAIHGHQLSLRNLISQ 25 (261)
T ss_dssp HHHHHTCHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHC
Confidence 46777777777777764
No 136
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=25.06 E-value=1.4e+02 Score=19.23 Aligned_cols=35 Identities=17% Similarity=0.239 Sum_probs=23.4
Q ss_pred CHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHHh
Q psy9898 22 TIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQL 59 (82)
Q Consensus 22 s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~l 59 (82)
+..-..+++..+|-.+.... +...|+.++.+++.+
T Consensus 267 ~~~~~~~~~~~la~~~~~~~---~~~~A~~~~~~~~~~ 301 (359)
T 3ieg_A 267 VAEYTVRSKERICHCFSKDE---KPVEAIRICSEVLQM 301 (359)
T ss_dssp SHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHcc---CHHHHHHHHHHHHHh
Confidence 34444566667777776554 677788888887765
No 137
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=24.72 E-value=19 Score=31.00 Aligned_cols=16 Identities=19% Similarity=0.380 Sum_probs=13.7
Q ss_pred HHHHHHHhCccccccc
Q psy9898 26 KIDALELLGASFANDK 41 (82)
Q Consensus 26 rIdALELLGATf~dkk 41 (82)
-.+|||||+..|.|..
T Consensus 483 ~~~ALeLL~~~f~d~~ 498 (961)
T 1e7u_A 483 VGLTMQLLDCNFSDEN 498 (961)
T ss_dssp HHHHHHTTSTTCCCHH
T ss_pred HHHHHHhcCCcCCCHH
Confidence 3689999999998765
No 138
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=24.56 E-value=1.6e+02 Score=19.48 Aligned_cols=35 Identities=9% Similarity=0.040 Sum_probs=28.6
Q ss_pred HHHHHHHHHhCcccccccccccHHHHHHHHHHHHHhHh
Q psy9898 24 EEKIDALELLGASFANDKENYCLTSAFKYLYKTMQLRI 61 (82)
Q Consensus 24 ~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~lR~ 61 (82)
...+.++--+|.+|.... +...|+.|+.+|+.+..
T Consensus 193 ~~~~~~~~nlg~~y~~~~---~y~~Al~~~~kal~~~~ 227 (293)
T 2qfc_A 193 EFDVKVRYNHAKALYLDS---RYEESLYQVNKAIEISC 227 (293)
T ss_dssp HHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHhHHHHHHHHh---hHHHHHHHHHHHHHHHH
Confidence 334478999999998776 88999999999998853
No 139
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=24.09 E-value=75 Score=18.22 Aligned_cols=30 Identities=13% Similarity=0.083 Sum_probs=17.9
Q ss_pred HHHHHhCcccccccccccHHHHHHHHHHHHHhH
Q psy9898 28 DALELLGASFANDKENYCLTSAFKYLYKTMQLR 60 (82)
Q Consensus 28 dALELLGATf~dkk~~~D~~~A~~~Wr~AM~lR 60 (82)
+++-.+|-.+.... +...|..++++++.+.
T Consensus 145 ~~~~~la~~~~~~~---~~~~A~~~~~~~~~~~ 174 (186)
T 3as5_A 145 KVHRAIAFSYEQMG---RHEEALPHFKKANELD 174 (186)
T ss_dssp HHHHHHHHHHHHTT---CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC---CHHHHHHHHHHHHHcC
Confidence 45555555554433 5667777777776654
No 140
>3kf8_A Protein STN1; OB fold; 2.40A {Candida tropicalis mya-3404}
Probab=23.62 E-value=51 Score=23.92 Aligned_cols=18 Identities=28% Similarity=0.250 Sum_probs=16.5
Q ss_pred ccHHHHHHHHHHHHHhHh
Q psy9898 44 YCLTSAFKYLYKTMQLRI 61 (82)
Q Consensus 44 ~D~~~A~~~Wr~AM~lR~ 61 (82)
+|+..=+++|+++|+.|.
T Consensus 187 ~dl~~Ei~~W~~~~~fR~ 204 (220)
T 3kf8_A 187 DGLHFEFEQWKKRMEFRK 204 (220)
T ss_dssp CCHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHH
Confidence 478899999999999998
No 141
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=23.48 E-value=1.2e+02 Score=22.75 Aligned_cols=51 Identities=10% Similarity=-0.090 Sum_probs=35.5
Q ss_pred HHHHHHHhhccCCCHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHHhHhC
Q psy9898 9 AEVVEFLVHKSGVTIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQLRIG 62 (82)
Q Consensus 9 ~~Ive~Li~~~~~s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~lR~~ 62 (82)
..+++.....-+-...+....+-=||.+|.+.- +...|..++++|+.++-.
T Consensus 353 ~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g---~~~eA~~~~~~Al~i~~~ 403 (429)
T 3qwp_A 353 TRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQG---MFPQAMKNLRLAFDIMRV 403 (429)
T ss_dssp HHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHH
Confidence 334444444334455566777777888887765 678999999999999764
No 142
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=23.26 E-value=36 Score=23.47 Aligned_cols=17 Identities=18% Similarity=0.258 Sum_probs=12.8
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.||..|+.++|++|+++
T Consensus 211 ~A~~~g~~~~v~~Ll~~ 227 (278)
T 1dcq_A 211 YCCLTDNAECLKLLLRG 227 (278)
T ss_dssp HHHHTTCHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHc
Confidence 47777888888888764
No 143
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=23.18 E-value=37 Score=22.99 Aligned_cols=17 Identities=18% Similarity=0.218 Sum_probs=12.2
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.||..|+.++|++|+++
T Consensus 98 ~A~~~g~~~~v~~Ll~~ 114 (285)
T 3d9h_A 98 EACLGGHLSCVKILLKH 114 (285)
T ss_dssp HHHHTTCHHHHHHHHHT
T ss_pred HHHHCCcHHHHHHHHHC
Confidence 46777777777777764
No 144
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=23.15 E-value=33 Score=23.11 Aligned_cols=35 Identities=11% Similarity=0.151 Sum_probs=25.8
Q ss_pred HHHHHHHhCcccccccc--------cccHHHHHHHHHHHHHhH
Q psy9898 26 KIDALELLGASFANDKE--------NYCLTSAFKYLYKTMQLR 60 (82)
Q Consensus 26 rIdALELLGATf~dkk~--------~~D~~~A~~~Wr~AM~lR 60 (82)
..+|+=.||..|...-. ..+...|++|+++|+++.
T Consensus 79 ~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~ 121 (158)
T 1zu2_A 79 KDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQ 121 (158)
T ss_dssp CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhC
Confidence 35677778888865420 137899999999999984
No 145
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=23.11 E-value=66 Score=22.53 Aligned_cols=33 Identities=15% Similarity=0.143 Sum_probs=26.7
Q ss_pred HHHHHHHHHhCcccccccccccHHHHHHHHHHHHHh
Q psy9898 24 EEKIDALELLGASFANDKENYCLTSAFKYLYKTMQL 59 (82)
Q Consensus 24 ~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~l 59 (82)
.+.++++..+|-.+.... +...|+.+|++|+.+
T Consensus 176 ~~~a~~~~~~g~~~~~~g---~~~~A~~~y~~Al~~ 208 (338)
T 2if4_A 176 IGAADRRKMDGNSLFKEE---KLEEAMQQYEMAIAY 208 (338)
T ss_dssp HHHHHHHHHHHHHTCSSS---CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHH
Confidence 446777888998888776 678899999999875
No 146
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=23.01 E-value=37 Score=24.04 Aligned_cols=17 Identities=18% Similarity=0.280 Sum_probs=13.7
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.|+..|+.+||++|+++
T Consensus 172 ~A~~~g~~~iv~~Ll~~ 188 (373)
T 2fo1_E 172 LAVLARRRRLVAYLMKA 188 (373)
T ss_dssp HHHHHTCHHHHHHHHHT
T ss_pred HHHHcChHHHHHHHHHC
Confidence 47888888888888875
No 147
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=22.81 E-value=45 Score=21.20 Aligned_cols=30 Identities=23% Similarity=0.205 Sum_probs=23.8
Q ss_pred HHHHHHhCcccccccccccHHHHHHHHHHHHHh
Q psy9898 27 IDALELLGASFANDKENYCLTSAFKYLYKTMQL 59 (82)
Q Consensus 27 IdALELLGATf~dkk~~~D~~~A~~~Wr~AM~l 59 (82)
.+++-.+|-.|.... +...|+.++++|+.+
T Consensus 88 ~~~~~~lg~~~~~~g---~~~~A~~~~~~al~~ 117 (208)
T 3urz_A 88 VDCLEACAEMQVCRG---QEKDALRMYEKILQL 117 (208)
T ss_dssp HHHHHHHHHHHHHHT---CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC---CHHHHHHHHHHHHHc
Confidence 477888888887665 778899999988875
No 148
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=22.81 E-value=54 Score=20.64 Aligned_cols=31 Identities=16% Similarity=0.135 Sum_probs=21.6
Q ss_pred HHHHHHhCcccccccccccHHHHHHHHHHHHHhH
Q psy9898 27 IDALELLGASFANDKENYCLTSAFKYLYKTMQLR 60 (82)
Q Consensus 27 IdALELLGATf~dkk~~~D~~~A~~~Wr~AM~lR 60 (82)
.+++-.||.+|.... +...|+.++++|+.+.
T Consensus 70 ~~~~~~lg~~~~~~g---~~~~Ai~~~~~al~l~ 100 (151)
T 3gyz_A 70 VDYIMGLAAIYQIKE---QFQQAADLYAVAFALG 100 (151)
T ss_dssp HHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHc---cHHHHHHHHHHHHhhC
Confidence 356667777776555 6677888888887753
No 149
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=22.63 E-value=1.2e+02 Score=22.87 Aligned_cols=50 Identities=12% Similarity=-0.001 Sum_probs=35.7
Q ss_pred HHHHHHhhccCCCHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHHhHhC
Q psy9898 10 EVVEFLVHKSGVTIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQLRIG 62 (82)
Q Consensus 10 ~Ive~Li~~~~~s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~lR~~ 62 (82)
..++.....-+-...+...+|-=||.+|.+.- +...|..++++|+.++-.
T Consensus 365 ~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg---~~~eA~~~~~~Al~i~~~ 414 (433)
T 3qww_A 365 KIIKPYSKHYPVYSLNVASMWLKLGRLYMGLE---NKAAGEKALKKAIAIMEV 414 (433)
T ss_dssp HHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCChHHHHHHHHHHHHHHhcc---CHHHHHHHHHHHHHHHHH
Confidence 33444444344456677777888888887766 678999999999999864
No 150
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=22.34 E-value=68 Score=17.79 Aligned_cols=30 Identities=20% Similarity=0.160 Sum_probs=23.4
Q ss_pred HHHHHHhCcccccccccccHHHHHHHHHHHHHh
Q psy9898 27 IDALELLGASFANDKENYCLTSAFKYLYKTMQL 59 (82)
Q Consensus 27 IdALELLGATf~dkk~~~D~~~A~~~Wr~AM~l 59 (82)
.+++-.+|-++.... +...|+.++.+++..
T Consensus 39 ~~~~~~lg~~~~~~~---~~~~A~~~~~~~~~~ 68 (129)
T 2xev_A 39 PNALYWLGESYYATR---NFQLAEAQFRDLVSR 68 (129)
T ss_dssp HHHHHHHHHHHHHTT---CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc---cHHHHHHHHHHHHHH
Confidence 467888888887665 778888888888774
No 151
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=22.12 E-value=42 Score=27.13 Aligned_cols=30 Identities=17% Similarity=0.232 Sum_probs=18.0
Q ss_pred HHHHHHhCcccccccccccHHHHHHHHHHHHHh
Q psy9898 27 IDALELLGASFANDKENYCLTSAFKYLYKTMQL 59 (82)
Q Consensus 27 IdALELLGATf~dkk~~~D~~~A~~~Wr~AM~l 59 (82)
.+||-.||..|.+.. +...|+.++++|+++
T Consensus 9 a~al~nLG~~~~~~G---~~~eAi~~~~kAl~l 38 (723)
T 4gyw_A 9 ADSLNNLANIKREQG---NIEEAVRLYRKALEV 38 (723)
T ss_dssp HHHHHHHHHHHHHTT---CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC---CHHHHHHHHHHHHHh
Confidence 466666666665554 555666666666654
No 152
>3k4t_A Virion-associated protein; coiled-coil, viral protein, tetramer, DNA-binding protein, P binding; 2.59A {Cauliflower mosaic virus}
Probab=21.96 E-value=57 Score=21.12 Aligned_cols=13 Identities=54% Similarity=0.823 Sum_probs=6.1
Q ss_pred HHHHHH-HHHhCcc
Q psy9898 24 EEKIDA-LELLGAS 36 (82)
Q Consensus 24 ~~rIdA-LELLGAT 36 (82)
+..|+| ||++|+|
T Consensus 22 ~~~i~aiL~~~gs~ 35 (95)
T 3k4t_A 22 KADIKAILELLGSQ 35 (95)
T ss_dssp HHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHhcCC
Confidence 333444 4555554
No 153
>1wr1_B Ubiquitin-like protein DSK2; UBA domain, UBA-ubiquitin complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1
Probab=21.91 E-value=86 Score=17.90 Aligned_cols=29 Identities=17% Similarity=0.281 Sum_probs=16.8
Q ss_pred HHHHHHHHhCcccccccc--------cccHHHHHHHHHH
Q psy9898 25 EKIDALELLGASFANDKE--------NYCLTSAFKYLYK 55 (82)
Q Consensus 25 ~rIdALELLGATf~dkk~--------~~D~~~A~~~Wr~ 55 (82)
++|+-|.-|| |-|... +.|+.+|+.++..
T Consensus 19 ~qi~~L~~MG--F~d~~~~~~AL~~~~gnve~Ave~L~~ 55 (58)
T 1wr1_B 19 HQLRQLNDMG--FFDFDRNVAALRRSGGSVQGALDSLLN 55 (58)
T ss_dssp HHHHHHHHHT--CCCHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred HHHHHHHHcC--CCcHHHHHHHHHHhCCCHHHHHHHHHh
Confidence 3566666676 333322 2477788777653
No 154
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=21.81 E-value=40 Score=21.13 Aligned_cols=35 Identities=23% Similarity=0.196 Sum_probs=20.3
Q ss_pred CHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHHh
Q psy9898 22 TIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQL 59 (82)
Q Consensus 22 s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~l 59 (82)
++....+++-.+|-.+.... +...|+.++++|+.+
T Consensus 32 ~~~~~~~~~~~~a~~~~~~~---~~~~A~~~~~~al~~ 66 (252)
T 2ho1_A 32 GRDEARDAYIQLGLGYLQRG---NTEQAKVPLRKALEI 66 (252)
T ss_dssp CHHHHHHHHHHHHHHHHHTT---CTGGGHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHcC---ChHHHHHHHHHHHhc
Confidence 44555666666666666544 445566666665543
No 155
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=21.63 E-value=1.3e+02 Score=23.09 Aligned_cols=50 Identities=8% Similarity=-0.053 Sum_probs=35.1
Q ss_pred HHHHHHhhccCCCHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHHhHhC
Q psy9898 10 EVVEFLVHKSGVTIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQLRIG 62 (82)
Q Consensus 10 ~Ive~Li~~~~~s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~lR~~ 62 (82)
..++.....-+-...+...++-=||.+|.+-. +...|..++++|+.+|-.
T Consensus 376 ~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G---~~~eA~~~~~~Al~i~~~ 425 (490)
T 3n71_A 376 RMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAG---HIEVGHGMICKAYAILLV 425 (490)
T ss_dssp HHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHHHHH
Confidence 33343333334455666777788888887665 678999999999999764
No 156
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=21.60 E-value=53 Score=20.09 Aligned_cols=32 Identities=13% Similarity=0.097 Sum_probs=25.2
Q ss_pred HHHHHHHhCcccccccccccHHHHHHHHHHHHHhH
Q psy9898 26 KIDALELLGASFANDKENYCLTSAFKYLYKTMQLR 60 (82)
Q Consensus 26 rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~lR 60 (82)
..+++-.+|..|.... +...|..+|.+|+.+.
T Consensus 120 ~~~~~~~l~~~~~~~g---~~~~A~~~~~~al~~~ 151 (213)
T 1hh8_A 120 ACEVLYNIAFMYAKKE---EWKKAEEQLALATSMK 151 (213)
T ss_dssp HHHHHHHHHHHHHHTT---CHHHHHHHHHHHHTTC
T ss_pred chHHHHHHHHHHHHcc---CHHHHHHHHHHHHHcC
Confidence 3477778888887655 7889999999999873
No 157
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=21.36 E-value=84 Score=16.75 Aligned_cols=28 Identities=21% Similarity=0.354 Sum_probs=14.9
Q ss_pred HHHHHhCcccccccccccHHHHHHHHHHHHH
Q psy9898 28 DALELLGASFANDKENYCLTSAFKYLYKTMQ 58 (82)
Q Consensus 28 dALELLGATf~dkk~~~D~~~A~~~Wr~AM~ 58 (82)
+++-.+|-.+.... +...|..++++++.
T Consensus 104 ~~~~~la~~~~~~~---~~~~A~~~~~~~~~ 131 (136)
T 2fo7_A 104 EAWYNLGNAYYKQG---DYDEAIEYYQKALE 131 (136)
T ss_dssp HHHHHHHHHHHTTT---CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc---cHHHHHHHHHHHHc
Confidence 34444444444333 55666666666654
No 158
>1sb0_B Protein C-MYB; CREB-binding protein, transcriptional activation, constitutive activation, LXXLL motif, KIX; NMR {Mus musculus} PDB: 2agh_A
Probab=21.26 E-value=41 Score=17.02 Aligned_cols=12 Identities=50% Similarity=0.587 Sum_probs=9.1
Q ss_pred HHHHHHHHHHhC
Q psy9898 23 IEEKIDALELLG 34 (82)
Q Consensus 23 ~~~rIdALELLG 34 (82)
++.||.-||||=
T Consensus 1 kEkriKElELLL 12 (26)
T 1sb0_B 1 KEKRIKELELLL 12 (26)
T ss_dssp CHHHHHHHHHHH
T ss_pred CchHHHHHHHHH
Confidence 367888888873
No 159
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=21.20 E-value=42 Score=22.74 Aligned_cols=17 Identities=18% Similarity=0.153 Sum_probs=11.6
Q ss_pred hhhhhhHHHHHHHHhhc
Q psy9898 2 SAAERTQAEVVEFLVHK 18 (82)
Q Consensus 2 ~Aa~~g~~~Ive~Li~~ 18 (82)
.||..|+.++|++|+++
T Consensus 37 ~A~~~g~~~~v~~Ll~~ 53 (285)
T 3kea_A 37 YAIADNNVRLVCTLLNA 53 (285)
T ss_dssp HHHHTTCHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHhC
Confidence 36667777777777764
No 160
>1vqu_A Anthranilate phosphoribosyltransferase 2; 17130499, structur genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI; 1.85A {Nostoc SP}
Probab=20.67 E-value=31 Score=26.31 Aligned_cols=67 Identities=22% Similarity=0.207 Sum_probs=47.6
Q ss_pred hhhHHHHHHHHhhccCCCHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHHhHhC----CCCCCCccc
Q psy9898 5 ERTQAEVVEFLVHKSGVTIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQLRIG----RIIMTPIYT 71 (82)
Q Consensus 5 ~~g~~~Ive~Li~~~~~s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~lR~~----~~i~K~~~~ 71 (82)
-.|-.|++|.|=-+.+.|+++-...+|-.|.+|+.-...+-..+.+-=.|+.+-+|-- .|+-.|..+
T Consensus 152 ~~GsaDvLEaLGv~~~~~~e~~~~~l~~~gi~fl~a~~~hPa~k~l~~~R~~lg~rTvfNilgpL~NPa~~ 222 (374)
T 1vqu_A 152 LTGSADVLEALGVNLGASPEKVQAALQEVGITFLFAPGWHPALKAVATLRRTLRIRTVFNLLGPLVNPLRP 222 (374)
T ss_dssp TTCHHHHHHHTTCCTTCCHHHHHHHHHHTSEEEEEETTSSGGGGGGHHHHHHHCSCCHHHHHGGGCCTTCC
T ss_pred CCCHHHHHHhCCCCCCCCHHHHHHHHHHCCEEEEEhHHhCHHHHHHHHHHHHhCCCCHHHHHHHhcCCCCC
Confidence 4688999999855556899999999999999999754323344555556777776643 456555443
No 161
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=20.53 E-value=67 Score=22.43 Aligned_cols=34 Identities=12% Similarity=0.067 Sum_probs=28.2
Q ss_pred HHHHHHHHHhCcccccccccccHHHHHHHHHHHHHhH
Q psy9898 24 EEKIDALELLGASFANDKENYCLTSAFKYLYKTMQLR 60 (82)
Q Consensus 24 ~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~lR 60 (82)
.+..+++..+|-.|.... +...|+.++++|+.+-
T Consensus 144 p~~a~~~~~~g~~~~~~g---~~~~A~~~y~~Al~~~ 177 (336)
T 1p5q_A 144 LEQSTIVKERGTVYFKEG---KYKQALLQYKKIVSWL 177 (336)
T ss_dssp HHHHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHHh
Confidence 345778889999987766 8899999999999864
No 162
>2dna_A Unnamed protein product; ubiquitin associated domain, DSK2 protein, proteasome, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1
Probab=20.50 E-value=1e+02 Score=18.33 Aligned_cols=29 Identities=21% Similarity=0.320 Sum_probs=19.5
Q ss_pred HHHHHHHhCcccccccc--------cccHHHHHHHHHHH
Q psy9898 26 KIDALELLGASFANDKE--------NYCLTSAFKYLYKT 56 (82)
Q Consensus 26 rIdALELLGATf~dkk~--------~~D~~~A~~~Wr~A 56 (82)
++.-|.-|| |.|.+. +.|+.+|+.++..-
T Consensus 22 ql~qL~~MG--F~d~~an~~AL~at~Gnve~Ave~L~~~ 58 (67)
T 2dna_A 22 EMECLQAMG--FVNYNANLQALIATDGDTNAAIYKLKSS 58 (67)
T ss_dssp HHHHHHHHT--CCCHHHHHHHHHHTTSCHHHHHHHHHHC
T ss_pred HHHHHHHcC--CCcHHHHHHHHHHcCCCHHHHHHHHHhC
Confidence 677777777 555543 24888888887653
No 163
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=20.42 E-value=65 Score=20.11 Aligned_cols=31 Identities=13% Similarity=0.005 Sum_probs=24.8
Q ss_pred HHHHHHHhCcccccccccccHHHHHHHHHHHHHh
Q psy9898 26 KIDALELLGASFANDKENYCLTSAFKYLYKTMQL 59 (82)
Q Consensus 26 rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~l 59 (82)
-.+++-.+|-.|.... +...|+.++++|+.+
T Consensus 75 ~~~~~~~l~~~~~~~~---~~~~A~~~~~~al~~ 105 (228)
T 4i17_A 75 LANAYIGKSAAYRDMK---NNQEYIATLTEGIKA 105 (228)
T ss_dssp HHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcc---cHHHHHHHHHHHHHH
Confidence 4577888888887666 778899999998875
No 164
>1o17_A Anthranilate PRT, anthranilate phosphoribosyltransferase, TRPD; nucleoside-phosphorylases; 2.05A {Sulfolobus solfataricus} SCOP: a.46.2.1 c.27.1.1 PDB: 1gxb_A 1zxy_A* 1zyk_A* 2gvq_A* 3gbr_A*
Probab=20.37 E-value=32 Score=25.86 Aligned_cols=66 Identities=17% Similarity=0.054 Sum_probs=48.0
Q ss_pred hhhHHHHHHHHhhccCCCHHHHHHHHHHhCcccccccccccHHHHHHHHHHHHHhHhC----CCCCCCcc
Q psy9898 5 ERTQAEVVEFLVHKSGVTIEEKIDALELLGASFANDKENYCLTSAFKYLYKTMQLRIG----RIIMTPIY 70 (82)
Q Consensus 5 ~~g~~~Ive~Li~~~~~s~~~rIdALELLGATf~dkk~~~D~~~A~~~Wr~AM~lR~~----~~i~K~~~ 70 (82)
-.|-.|+.|.|=-+.+.|+++-.+.+|=.|.+|+.=...+-..+.+-=.|+.+-+|-- .|+-.|..
T Consensus 115 ~~GsaDvLEaLGv~~~~~~e~~~~~l~~~gi~fl~a~~~hPa~k~l~~~R~~lg~rTvfN~lgpL~nPa~ 184 (345)
T 1o17_A 115 KSGSADVLEALGYNIIVPPERAKELVNKTNFVFLFAQYYHPAMKNVANVRKTLGIRTIFNILGPLTNPAN 184 (345)
T ss_dssp SCSHHHHHHHHTBCCCCCHHHHHHHHHHHSEEEEEHHHHCGGGGGTHHHHHHHCSCCGGGGCGGGCCTTC
T ss_pred cccHHHHHHhCCCCCCCCHHHHHHHHHHcCEEEEehHHhChHHHHHHHHHHHhCCCCHHHHHHHhcCccC
Confidence 4688999999866667899999999999999999875333344555556777777754 35555543
Done!