RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy9903
         (204 letters)



>g1cxp.1 a.93.1.2 (A:,C:) Myeloperoxidase {Human (Homo sapiens)
           [TaxId: 9606]}
          Length = 570

 Score =  159 bits (402), Expect = 2e-46
 Identities = 51/129 (39%), Positives = 79/129 (61%), Gaps = 7/129 (5%)

Query: 3   TDGLTQHLFEQVGSKVPYGLDLVSLNIQRGRDHGLPGYPKWRKYCGLSEPKTFDDLKDHV 62
            D + + LFEQV      GLDL +LN+QR RDHGLPGY  WR++CGL +P+T   L   +
Sbjct: 391 VDEIRERLFEQVM---RIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVL 447

Query: 63  DDESL-KLLSKIYKSVDDVDMYTGGLSEKPLEGGMLGPTMTCLIANQFVRMKSGDRYWYE 121
            +  L + L + Y + +++D++ GG+SE     G +GP + C+I  QF +++ GDR+W+ 
Sbjct: 448 RNLKLARKLMEQYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWW- 506

Query: 122 TSEQPQAFT 130
             E    F+
Sbjct: 507 --ENEGVFS 513



 Score = 74.0 bits (181), Expect = 3e-16
 Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 4/71 (5%)

Query: 135 LTQHLFEQVGSKVPYGLDLVSLNIQRGRDHGLPGYPRWRKYCGLSEPKTFDDLKDHVDDE 194
           + + LFEQV      GLDL +LN+QR RDHGLPGY  WR++CGL +P+T   L   + + 
Sbjct: 394 IRERLFEQVM---RIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNL 450

Query: 195 SL-KLLSKIYK 204
            L + L + Y 
Sbjct: 451 KLARKLMEQYG 461


>d1cvua1 a.93.1.2 (A:74-583) Prostaglandin H2 synthase {Mouse (Mus
           musculus) [TaxId: 10090]}
          Length = 511

 Score =  154 bits (390), Expect = 4e-45
 Identities = 29/136 (21%), Positives = 52/136 (38%), Gaps = 5/136 (3%)

Query: 3   TDGLTQHLFEQVGSKVPYGL-DLVSLNIQRGRDHGLPGYPKWRKYCGLSEPKTFDDLKDH 61
           T  +   +    G  VP  +  +   +I + R+       ++RK   L    +F++L   
Sbjct: 355 TRQIAGRVAG--GRNVPIAVQAVAKASIDQSREMKYQSLNEYRKRFSLKPYTSFEELTG- 411

Query: 62  VDDESLKLLSKIYKSVDDVDMYTGGLSEKPLEGGMLGPTMTCLIANQFVRMKSGDRYWYE 121
            + E    L  +Y  +D +++Y   L EKP    + G TM  L A   ++   G+     
Sbjct: 412 -EKEMAAELKALYSDIDVMELYPALLVEKPRPDAIFGETMVELGAPFSLKGLMGNPICSP 470

Query: 122 TSEQPQAFTAGKGLTQ 137
              +P  F    G   
Sbjct: 471 QYWKPSTFGGEVGFKI 486



 Score = 66.5 bits (162), Expect = 1e-13
 Identities = 14/91 (15%), Positives = 30/91 (32%), Gaps = 5/91 (5%)

Query: 115 GDRYWYETSEQPQAFTAGKGLTQHLFEQVGSKVPYGL-DLVSLNIQRGRDHGLPGYPRWR 173
            +    E        +  + +   +    G  VP  +  +   +I + R+        +R
Sbjct: 338 NNSILLEHGLTQFVESFTRQIAGRVAG--GRNVPIAVQAVAKASIDQSREMKYQSLNEYR 395

Query: 174 KYCGLSEPKTFDDLKDHVDDESLKLLSKIYK 204
           K   L    +F++L    + E    L  +Y 
Sbjct: 396 KRFSLKPYTSFEELTG--EKEMAAELKALYS 424


>d1q4ga1 a.93.1.2 (A:74-584) Prostaglandin H2 synthase {Sheep (Ovis
           aries) [TaxId: 9940]}
          Length = 511

 Score =  143 bits (361), Expect = 5e-41
 Identities = 26/141 (18%), Positives = 51/141 (36%), Gaps = 9/141 (6%)

Query: 4   DGLTQHLFEQVGSKV-------PYGLDLVSLNIQRGRDHGLPGYPKWRKYCGLSEPKTFD 56
           + L      Q   ++        + L +    I+  R   L  + ++RK  G+    +F 
Sbjct: 347 EALVDAFSRQPAGRIGGGRNIDHHILHVAVDVIKESRVLRLQPFNEYRKRFGMKPYTSFQ 406

Query: 57  DLKDHVDDESLKLLSKIYKSVDDVDMYTGGLSEKPLEGGMLGPTMTCLIANQFVRMKSGD 116
           +L    + E    L ++Y  +D ++ Y G L EK     + G +M  + A   ++   G+
Sbjct: 407 ELTG--EKEMAAELEELYGDIDALEFYPGLLLEKCHPNSIFGESMIEMGAPFSLKGLLGN 464

Query: 117 RYWYETSEQPQAFTAGKGLTQ 137
                   +   F    G   
Sbjct: 465 PICSPEYWKASTFGGEVGFNL 485



 Score = 62.7 bits (152), Expect = 2e-12
 Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 2/57 (3%)

Query: 148 PYGLDLVSLNIQRGRDHGLPGYPRWRKYCGLSEPKTFDDLKDHVDDESLKLLSKIYK 204
            + L +    I+  R   L  +  +RK  G+    +F +L    + E    L ++Y 
Sbjct: 369 HHILHVAVDVIKESRVLRLQPFNEYRKRFGMKPYTSFQELTG--EKEMAAELEELYG 423


>d1vhna_ c.1.4.1 (A:) Putative flavin oxidoreducatase TM0096
           {Thermotoga maritima [TaxId: 2336]}
          Length = 305

 Score = 26.9 bits (58), Expect = 1.8
 Identities = 5/30 (16%), Positives = 13/30 (43%), Gaps = 2/30 (6%)

Query: 35  HGLPGYPKWRKYCGLSEPKTFDDLKDHVDD 64
             L G  ++R+   + + +    LK+   +
Sbjct: 272 KDLKGARRFREK--VMKIEEVQILKEMFYN 299


>d1khba1 c.91.1.1 (A:260-622) Cytosolic phosphoenolpyruvate
           carboxykinase (GTP-hydrolyzing) {Human (Homo sapiens)
           [TaxId: 9606]}
          Length = 363

 Score = 25.2 bits (55), Expect = 7.5
 Identities = 5/18 (27%), Positives = 12/18 (66%)

Query: 2   ETDGLTQHLFEQVGSKVP 19
           E + + ++L +QV + +P
Sbjct: 329 EVEDIEKYLVDQVNADLP 346


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.317    0.139    0.428 

Gapped
Lambda     K      H
   0.267   0.0517    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 769,843
Number of extensions: 33644
Number of successful extensions: 96
Number of sequences better than 10.0: 1
Number of HSP's gapped: 93
Number of HSP's successfully gapped: 9
Length of query: 204
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 123
Effective length of database: 1,295,466
Effective search space: 159342318
Effective search space used: 159342318
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (23.9 bits)