RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9904
(592 letters)
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 888
Score = 449 bits (1155), Expect = e-149
Identities = 406/598 (67%), Positives = 483/598 (80%), Gaps = 28/598 (4%)
Query: 5 AEIDIILLKGDVEEDEMIPDRDEDIRPRFHKSKRSVKAEGENMNMGENGGEEVEEEDDDL 64
++IDIILLKGDVEEDE IPD ++DIRPRFH+S+ E+G EE +++DD++
Sbjct: 309 SDIDIILLKGDVEEDETIPDSEQDIRPRFHRSRTVA------QQHDEDGIEEEDDDDDEI 362
Query: 65 DDDSSLSDWNLRKCSAAALDVLANVFREELLPVLLPILKETLFHHDWEIKESGILALGAI 124
DDD ++SDWNLRKCSAAALDVLANV+R+ELLP +LP+LKE LFHH+W +KESGIL LGAI
Sbjct: 363 DDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFHHEWVVKESGILVLGAI 422
Query: 125 AEGCMNGMVPHLNELVPFLITCLSDKKALVRAITCWTLSRYSHWVVSQPHDSYLKPLMTE 184
AEGCM GM+P+L EL+P LI CLSDKKALVR+ITCWTLSRY+HWVVSQP D+YLKPLMTE
Sbjct: 423 AEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTE 482
Query: 185 MLGCMNGMVPHLNELVPFLITCLSDKKALVRAITCWTLSRYSHWVVSQPHDSYLKPLMTE 244
+L + + E L ++ + L ++
Sbjct: 483 LLKRILDSNKRVQEAACSAFATLEEE------------ACTELVPYLAYILDTLVFAFSK 530
Query: 245 --HKNLLILYDAIGTLADSVGHHLNKPEYISLLMPPLIQKWNILKDEDKDLFPLLECLSS 302
HKNLLILYDAIGTLADSVGHHLNKPEYI +LMPPLIQKWN+LKDEDKDLFPLLECLSS
Sbjct: 531 YQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSS 590
Query: 303 VATALQAGFLPYCEPVYRRCVSLIEQTLNQHMANSQNPEQFDAPDKDFMIVALDLLSGLA 362
VATALQ+GFLPYCEPVY+RCV+L+++TL Q M N+ P+Q++APDKDFMIVALDLLSGLA
Sbjct: 591 VATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLA 650
Query: 363 EGLDMHIDSLVSNSNIMHLLYQCMQDPMPEVRQSSFALLGDLTKACFSHVHPCISDFMPI 422
EGL +I+ LV+ SNI+ L+YQCMQD MPEVRQSSFALLGDLTKACF HV PCI+DFMPI
Sbjct: 651 EGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPI 710
Query: 423 LGQNLNPDLISVCNNATWAIGEISVKLGEDMRRYVPMVINQLIIIINRPNTPKTLLENTA 482
LG NLNP+ ISVCNNATWAIGEIS+++G +M+ Y+PMV++QL+ IINRPNTPKTLLENTA
Sbjct: 711 LGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLLENTA 770
Query: 483 ITIGRLGYVCPHDVAP--------LCSSLRNIRDNEEKDSAFRGMCAMITVNPGGVVQEF 534
ITIGRLGYVCP +VAP C+SLRNIRDNEEKDSAFRG+C MI+VNP GV+Q+F
Sbjct: 771 ITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSGVIQDF 830
Query: 535 IFFCDAVASWSTPKEDLKEMFHKILHGFRTQVGDENWQRFADQFPDQLRDRLSAMYGV 592
IFFCDAVASW PK+DL++MF KILHGF+ QVGDENW+RF+DQFP L++RL+A YGV
Sbjct: 831 IFFCDAVASWINPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAFYGV 888
Score = 66.3 bits (160), Expect = 6e-12
Identities = 60/448 (13%), Positives = 122/448 (27%), Gaps = 37/448 (8%)
Query: 71 SDWNLRKCSAAALDVLANVFREELLPVLLPILKETLFHHDWEIKESGILALGAIAEGCMN 130
S +R + +A+ + P LLP L L D+ E AL I E
Sbjct: 100 SSPLIRATVGILITTIASKGELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAE 159
Query: 131 GMVPH-----LNELVPFLITCLSDKKALVR--AITCWTLSRYSHWVVSQPHDSYLKPLMT 183
+ LN ++P + +R A+ C S H +
Sbjct: 160 ILDSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFTENLF 219
Query: 184 EMLGCMNGMV--------------------PHLNELVPFLITCLSDKKALVRAITCWTLS 223
+ G V PH++ +V +++ D+ V
Sbjct: 220 ALAGDEEPEVRKNVCRALVMLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVA---LEACE 276
Query: 224 RYSHWVVSQPHDSYLKPLMTEHKNLLILY-----DAIGTLADSVGHHLNKPEYISLLMPP 278
+ L + + +L+ I L V P+ + P
Sbjct: 277 FWLTLAEQPICKDVLVRHLPKLIPVLVNGMKYSDIDIILLKGDVEEDETIPDSEQDIRPR 336
Query: 279 LIQKWNILKDEDKDLFPLLECLSSVATALQAGFLPYCEPVYRRCVSLIEQTLNQHMANSQ 338
+ + + D+D + + ++ +
Sbjct: 337 FHRSRTVAQQHDEDGIEEEDDDDDEIDDDDTISDWNLRKCSAAALDVLANVYRDELLPHI 396
Query: 339 NPEQFDAPDKDFMIVALDLLSGLAEGLDMHIDSLVS-NSNIMHLLYQCMQDPMPEVRQSS 397
P + +V + L + + ++ ++ L QC+ D VR +
Sbjct: 397 LPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSIT 456
Query: 398 FALLGDLTKACFSHVHPCISD-FMPILGQNLNPDLISVCNNATWAIGEISVKLGEDMRRY 456
L S M L + + V A A + + ++ Y
Sbjct: 457 CWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPY 516
Query: 457 VPMVINQLIIIINRPNTPKTLLENTAIT 484
+ +++ L+ ++ L+ AI
Sbjct: 517 LAYILDTLVFAFSKYQHKNLLILYDAIG 544
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId:
9606]}
Length = 876
Score = 161 bits (408), Expect = 1e-42
Identities = 101/536 (18%), Positives = 193/536 (36%), Gaps = 58/536 (10%)
Query: 7 IDIILLKGDVEEDEMIPDRD--EDIRPRFHKSKRSVKAEGENMNMGENGGEEVEEEDDDL 64
I+ D E D I + E RP H SK K + + +
Sbjct: 280 IEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAK------GALQYLVPILTQTLTKQ 333
Query: 65 DDDSSLSDWNLRKCSAAALDVLANVFREELLPVLLPILKETLFHHDWEIKESGILALGAI 124
D++ DWN K + L +LA ++++P +LP +KE + + DW +++ ++A G I
Sbjct: 334 DENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCI 393
Query: 125 AEGCMNG-MVPHLNELVPFLITCLSDKKALVRAITCWTLSRYSHWVVSQPHDSYLKPLMT 183
EG + P + + +P LI + D +VR WT+ R + + +
Sbjct: 394 LEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYLAPLL 453
Query: 184 EMLGCMNGMVPHLNELVPFLITCLSDKKALVRAITCWTLSRYSHWVVSQPHDSYLKPLMT 243
+ L P + V + + L++ Y V+ + ++
Sbjct: 454 QCLIEGLSAEPRVASNVCWAFSSLAEAA-------------YEAADVADDQEEPATYCLS 500
Query: 244 EHKNLLILYDAIGTLADSVGHHLNKPEYISLLMPPLIQKWNILKDEDKDLFPLLECLSSV 303
L I+ + T GH N L I+K+ KD +P ++ + V
Sbjct: 501 SSFEL-IVQKLLETTDRPDGHQNN------LRSSAYESLMEIVKNSAKDCYPAVQKTTLV 553
Query: 304 ATALQAGFLPYCEPV--------YRRCVSLIEQTLNQHMANSQNPEQFDAPDKDFMIVAL 355
L + + SL+ TL + Q+ + M L
Sbjct: 554 IMERLQQVLQMESHIQSTSDRIQFNDLQSLLCATLQNVLRKVQHQD-ALQISDVVMASLL 612
Query: 356 DLLSGLAEGLDMHIDSLVSNSNIMHLLYQCMQDPMP----------------EVRQSSFA 399
+ A + D+L++ S ++ +L M +V ++
Sbjct: 613 RMFQSTAGSGGVQEDALMAVSTLVEVLGGEFLKYMEAFKPFLGIGLKNYAEYQVCLAAVG 672
Query: 400 LLGDLTKACFSHVHPCISDFMPILGQNLNPDLI--SVCNNATWAIGEISVKLGEDMRRYV 457
L+GDL +A S++ P + M +L +NL + + SV G+I++ +G + ++Y+
Sbjct: 673 LVGDLCRALQSNIIPFCDEVMQLLLENLGNENVHRSVKPQILSVFGDIALAIGGEFKKYL 732
Query: 458 PMVINQLIIIINRPNTPKTLLENTAITIGRLGYVCPHDVAPLCSSLRNIRDNEEKD 513
+V+N L + + L C + L+ ++N D
Sbjct: 733 EVVLNTLQQASQ--AQVDKSDYDMVDYLNELRESCLEAYTGIVQGLKGDQENVHPD 786
>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 959
Score = 161 bits (408), Expect = 2e-42
Identities = 79/636 (12%), Positives = 171/636 (26%), Gaps = 80/636 (12%)
Query: 6 EIDIILLKGDVEEDEMIPDRDEDIRPRFHKSKRSVKAEGENMN--MGENGGEEVEEEDDD 63
E D+ L + D E D R +K E + ++ D
Sbjct: 351 EEDVELFEDDPIEYIRRDLEGSDTDTRRRACTDFLKELKEKNEVLVTNIFLAHMKGFVDQ 410
Query: 64 LDDDSSLSDWNLR------------KCSAAALDVLANVFREELLPVLLPILKETLFHHDW 111
D S +W + + V + ++ + L ++
Sbjct: 411 YMSDPS-KNWKFKDLYIYLFTALAINGNITNAGVSSTNNLLNVVDFFTKEIAPDLTSNNI 469
Query: 112 EIKESGILALGAIAEGCMNGMVPHLNELVPFLITCLSDKKALVRAITCWTLSRYSHWVVS 171
+ A+ I L EL+P L T L + +V T+ + S
Sbjct: 470 PHIILRVDAIKYIYTFRNQLTKAQLIELMPILATFLQTDEYVVYTYAAITIEKILTIRES 529
Query: 172 QPHDSYLKPLMTEMLGCMNGMVPHLNELVPFLITCLSDKKALVRAITCWTLSRYSHWVVS 231
+++ ++ ++ +L L+ + + +
Sbjct: 530 NTSPAFIFH-KEDISNSTEILLKNLIALILKHGSSPEKLAENEFLMRSIFRVLQTSEDSI 588
Query: 232 QPHDSYLKPLMTE-----------HKNLLILYDAIGTLADSVGHHLNKPEYISLLMPPLI 280
QP L E + +++IG + + N P + +MP +
Sbjct: 589 QPLFPQLLAQFIEIVTIMAKNPSNPRFTHYTFESIGAILNYTQRQ-NLPLLVDSMMPTFL 647
Query: 281 QKW-NILKDEDKDLFPLLECLSSVATALQAGFLPYCEPVYRRCVSLIEQTLNQHMANSQN 339
+ +++ +F ++ + + + P +P+ V ++ +
Sbjct: 648 TVFSEDIQEFIPYVFQIIAFVVEQSATIPESIKPLAQPLLAPNVWELKGNI--------- 698
Query: 340 PEQFDAPDKDFMIVALDLLSGLAEGLDMHIDSLVSNSNIMHLLYQCMQDPMPEVRQSSFA 399
K F+ + L ++ + + + E F
Sbjct: 699 -PAVTRLLKSFIKTDSSIFPDL--------------VPVLGIFQRLIASKAYE--VHGFD 741
Query: 400 LLGDLTKACFSHV-HPCISDFMPILGQNL-NPDLISVCNNATWAIGEISVKLGED----- 452
LL + + P I +L Q L N T G IS KLG D
Sbjct: 742 LLEHIMLLIDMNRLRPYIKQIAVLLLQRLQNSKTERYVKKLTVFFGLISNKLGSDFLIHF 801
Query: 453 MRRYVPMVINQLIIIINRPNTPK--TLLENTAITIGRLGYVCPHD---------VAPLCS 501
+ + Q+ P LL+ IG L V ++ +
Sbjct: 802 IDEVQDGLFQQIWGNFIITTLPTIGNLLDRKIALIGVLNMVINGQFFQSKYPTLISSTMN 861
Query: 502 SLRNIRDNEEKDSAFRGMCAMITVNPGGVVQE-FIFFCDAVASWSTP------KEDLKEM 554
S+ ++ + + + F P ++
Sbjct: 862 SIIETASSQSIANLKNDYVDLDNLEEISTFGSHFSKLVSISEKPFDPLPEIDVNNGVRLY 921
Query: 555 FHKILHGFRTQVGDENWQRFADQFPDQLRDRLSAMY 590
+ L+ + G+ Q + + +L+ +
Sbjct: 922 VAEALNKYNAISGNTFLNTILPQLTQENQVKLNQLL 957
Score = 28.0 bits (61), Expect = 3.7
Identities = 42/386 (10%), Positives = 108/386 (27%), Gaps = 60/386 (15%)
Query: 137 NELVPFLITCLSDKKALVRAITCWTLS----RYSHWVVSQPHDSYLKPLMTEMLGCMNGM 192
L+ L + LS+ + R+ S +K ++ +
Sbjct: 122 PTLLSDLASRLSNDDMVTNKGVLTVAHSIFKRWRPLFRSDELFLEIKLVLDVFTAPFLNL 181
Query: 193 VPHLNELVPFLITCLSDKKALVRAITCW--TLSRYSHWVVSQPHDSYLKPLMTEHKNLLI 250
+ ++E + + L + ++ + + + ++ M L
Sbjct: 182 LKTVDEQITANENNKASLNILFDVLLVLIKLYYDFNCQDIPEFFEDNIQVGMGIFHKYLS 241
Query: 251 LYDAIGTLADSVGHHLNKPE----------------------YISLLMPPLIQKWNILKD 288
+ + D H + I+ + + +
Sbjct: 242 YSNPLLEDPDETEHASVLIKVKSSIQELVQLYTTRYEDVFGPMINEFIQITWNLLTSISN 301
Query: 289 EDKDLFPLLECLSSVATALQAGFLPYCEPVYRRCVSLIEQTLNQHMANSQNPEQFDAPDK 348
+ K + + LS + + ++ EQ + ++ + + D
Sbjct: 302 QPKYDILVSKSLSFLTAVTRIPKYFEIFNNESAMNNITEQIILPNVTLREEDVELFEDDP 361
Query: 349 DFMI--------------VALDLLSGLAEGLDMHIDSLVSNSNIMHLLYQCMQDPMPEVR 394
I D L L E ++ + ++ + + Q M DP +
Sbjct: 362 IEYIRRDLEGSDTDTRRRACTDFLKELKEKNEVLVTNIFLAH-MKGFVDQYMSDPSKNWK 420
Query: 395 Q--------SSFALLGDLTKACFSHVHPCISDFMPILGQNLNPDLIS-------VCNNAT 439
++ A+ G++T A S + + + + + + PDL S + +A
Sbjct: 421 FKDLYIYLFTALAINGNITNAGVSSTNN-LLNVVDFFTKEIAPDLTSNNIPHIILRVDAI 479
Query: 440 WAIGEIS-VKLGEDMRRYVPMVINQL 464
I + +P++ L
Sbjct: 480 KYIYTFRNQLTKAQLIELMPILATFL 505
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 861
Score = 121 bits (302), Expect = 3e-29
Identities = 59/423 (13%), Positives = 139/423 (32%), Gaps = 14/423 (3%)
Query: 55 EEVEEEDDDLDDDSSLSDWNLRKCSAAALDVLANVFREELLPVLLPILKETLFHHDWEIK 114
+ ++D DWN+ + A L + A +L +L +++ + +W +
Sbjct: 327 PNLLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCGNHILEPVLEFVEQNITADNWRNR 386
Query: 115 ESGILALGAIAEGCM-NGMVPHLNELVPFLITCLSDKKALVRAITCWTLSRYSHWVVSQP 173
E+ ++A G+I +G ++++ +P ++ ++D+ V+ T W + R + V
Sbjct: 387 EAAVMAFGSIMDGPDKVQRTYYVHQALPSILNLMNDQSLQVKETTAWCIGRIADSVAESI 446
Query: 174 HDSYLKPLMTEMLGCMNGMVPHLNELVPFLITCLSDKKALVRAITCWTLSRYSHWVVSQP 233
P + + P + + I L ++ A + +
Sbjct: 447 DPQQHLPGVVQACLIGLQDHPKVATNCSWTIINLVEQLAEATPSPIYNFYPALVDGLIGA 506
Query: 234 HDSYLKPLMTEHKNLLILYDAIGTLADSVGHHLNKPEYISLLMPPLIQKWNILKDEDKDL 293
+ E + A+ T+ + + E + + ++ K D++
Sbjct: 507 ANRI----DNEFNARASAFSALTTMVEYATDTV--AETSASISTFVMDKLGQTMSVDENQ 560
Query: 294 FPLLECLSSVATALQAGFLPYCEPVYRRCVSLIEQTLNQHMANSQNPEQFDAPDKDFMIV 353
L + S LQ+ L V R+ S +E + M +
Sbjct: 561 LTLEDAQS--LQELQSNILTVLAAVIRKSPSSVEPVADMLMGLFFRLLE-KKDSAFIEDD 617
Query: 354 ALDLLSGLAEGLDMHIDSLVSNSNIMHLLYQCMQDPMPEVRQSSFALLGDLTKACFSHVH 413
+S LA L + + L + + V ++ + D++ +
Sbjct: 618 VFYAISALAASLGKGFEKYLET--FSPYLLKALNQVDSPVSITAVGFIADISNSLEEDFR 675
Query: 414 PCISDFMPILGQNLNPDLI--SVCNNATWAIGEISVKLGEDMRRYVPMVINQLIIIINRP 471
M +L Q ++ + G+I+ +G D Y+ ++ + N
Sbjct: 676 RYSDAMMNVLAQMISNPNARRELKPAVLSVFGDIASNIGADFIPYLNDIMALCVAAQNTK 735
Query: 472 NTP 474
Sbjct: 736 PEN 738
Score = 45.6 bits (106), Expect = 2e-05
Identities = 48/478 (10%), Positives = 129/478 (26%), Gaps = 21/478 (4%)
Query: 65 DDDSSLSDWNLRKCSAAALDVLANVFREELLPVLLPILKETLFHHDWEIKESGILALGAI 124
+ ++ L + + + + N+ RE L+ ++ E D E++ + L I
Sbjct: 192 ETSKAVRLAALNALADSLIFIKNNMEREGERNYLMQVVCEATQAEDIEVQAAAFGCLCKI 251
Query: 125 AEGCMNGMVPHLNELV-PFLITCLSDKKALVRAITCWTLSRYSHWVVSQPHDSYLKPLMT 183
M P++ + + I + V ++T S + L
Sbjct: 252 MSKYYTFMKPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEEEIDIA--YELAQFPQ 309
Query: 184 EMLGCMNGMVPHLNELVPFLITCLSD------------KKALVRAITCWTLSRYSHWVVS 231
L N + + ++VP L+ L+ + + + + +H +
Sbjct: 310 SPLQSYNFALSSIKDVVPNLLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCGNHILEP 369
Query: 232 QPHDSYLKPLMTEHKNLLILYDAIGTLADSVGHHLNKPEYISLLMPPLIQKWNILKDEDK 291
+N A G++ D L L + +
Sbjct: 370 VLEFVEQNITADNWRNREAAVMAFGSIMDGPDKVQRTYYVHQALPSILNLMNDQSLQVKE 429
Query: 292 DLFPLLECLSSVATALQAGFLPYCEPVYRRCVSLIEQTLNQHMANSQNPEQFDAPDKDFM 351
+ ++ V + L + + + +
Sbjct: 430 TTAWCIGRIADSVAESIDPQQHLPGVVQACLIGLQDHPKVATNCSWTIINLVEQLAEATP 489
Query: 352 IVALDLLSGLAEGLDMHIDSLVSNSNIMHLLYQCMQDPMPEVRQSSFALLGDLTKACFSH 411
+ L +GL + + + N + + + + ++
Sbjct: 490 SPIYNFYPALVDGLIGAANRIDNEFNARASAFSALTTMVEYATDTVAETSASISTFVMDK 549
Query: 412 VHPCISDFMPILGQNLNPDLISVCNNATWAIGEISVKLGEDMRRYVPMVINQLIIIINRP 471
+ +S L L + +N + + K + M++ ++ +
Sbjct: 550 LGQTMSVDENQLTLEDAQSLQELQSNILTVLAAVIRKSPSSVEPVADMLMGLFFRLLEKK 609
Query: 472 NTPK------TLLENTAITIGRLGYVCPHDVAPLCSSLRNIRDNEEKDSAFRGMCAMI 523
++ + A ++G+ +P N D+ +A + +
Sbjct: 610 DSAFIEDDVFYAISALAASLGKGFEKYLETFSPYLLKALNQVDSPVSITAVGFIADIS 667
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId:
9606]}
Length = 458
Score = 107 bits (268), Expect = 1e-25
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 8/166 (4%)
Query: 23 PDRDEDIRPRFHKSKRSVKAEGENMNMGENGGEEVEEEDDDLDDDSSLSDWNLRKCSAAA 82
+ E RP H SK K + + + D++ DWN K +
Sbjct: 297 SEAAEQGRPPEHTSKFYAK------GALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVC 350
Query: 83 LDVLANVFREELLPVLLPILKETLFHHDWEIKESGILALGAIAEGCMNGMV-PHLNELVP 141
L +LA ++++P +LP +KE + + DW +++ ++A G I EG + P + + +P
Sbjct: 351 LMLLATCCEDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMP 410
Query: 142 FLITCLSDKKALVRAITCWTLSRYSHWVVSQP-HDSYLKPLMTEML 186
LI + D +VR WT+ R + +D YL PL+ ++
Sbjct: 411 TLIELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQCLI 456
Score = 61.0 bits (146), Expect = 2e-10
Identities = 28/169 (16%), Positives = 53/169 (31%), Gaps = 25/169 (14%)
Query: 82 ALDVLANVFREELLPVLLPILKET---LFHHDWEIKESGILALGAIAEGCMNGMVPH-LN 137
+ + + + L L+PIL +T +D + + A G +
Sbjct: 305 PPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVP 364
Query: 138 ELVPFLITCLSDKKALVRAITCWTLSRYSHWVVSQPHDSYLKPLMTEMLGCMNGMV-PHL 196
++PF+ + + R G + P +
Sbjct: 365 HVLPFIKEHIKNPDWRYRDAAVMAFGCILE-------------------GPEPSQLKPLV 405
Query: 197 NELVPFLITCLSDKKALVRAITCWTLSRYSHWVVSQP-HDSYLKPLMTE 244
+ +P LI + D +VR WT+ R + +D YL PL+
Sbjct: 406 IQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQC 454
Score = 53.3 bits (126), Expect = 5e-08
Identities = 51/417 (12%), Positives = 116/417 (27%), Gaps = 71/417 (17%)
Query: 101 ILKETLFHHDWEIKESGILALGAIAEGCMNGMVPHLNELVPFLITCLSDKKALVRAITCW 160
+K +L D +IK AI E+ +++ L + +
Sbjct: 59 QIKNSLTSKDPDIKAQYQQRWLAIDANARR-------EVKNYVLQTLGTETYRPSSA-SQ 110
Query: 161 TLSRYSHWVVSQPHDSYLKPLMTEMLGCMNGMVPHLNELVPFLITCLSDKKALVRAITCW 220
++ + + L P + + H+ E I I
Sbjct: 111 CVAGIACAEIPVNQWPELIPQLVANV-TNPNSTEHMKESTLEAIGY----------ICQD 159
Query: 221 TLSRYSHWVVSQPHDSYLKPLMTEHKNLLILYDAIGTLADSVGHHLNKPEYISLLMPPLI 280
++ + ++ + E + + A L +S+ + S +
Sbjct: 160 IDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQ 219
Query: 281 QKWNILKDEDKDLF-PLLECLSSVATALQAGFLPYCEPVYRRCV---------------- 323
+ D + L+ L + + Y P
Sbjct: 220 VVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGI 279
Query: 324 ----SLIEQTLNQHMANSQNPEQFDAPDKDFMIVALDLLSGLAEGLDMHIDSLVSNSN-- 377
++ ++ ++ + S+ EQ P+ A L L L + N +
Sbjct: 280 EFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDD 339
Query: 378 --------------------------IMHLLYQCMQDPMPEVRQSSFALLGDLTKACFSH 411
++ + + +++P R ++ G + +
Sbjct: 340 DWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPS 399
Query: 412 -VHPCISDFMPILGQNLNPDLISVCNNATWAIGEISVKLGEDMR--RYVPMVINQLI 465
+ P + MP L + + + V + A W +G I L E Y+ ++ LI
Sbjct: 400 QLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQCLI 456
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein
phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId:
9606]}
Length = 588
Score = 65.6 bits (158), Expect = 8e-12
Identities = 18/115 (15%), Positives = 48/115 (41%), Gaps = 3/115 (2%)
Query: 73 WNLRKCSAAALDVLANVF-REELLPVLLPILKETLFHHDWEIKESGILALGAIAEGCMNG 131
+ +R+ + + L L F +E ++P + ++ + + + + ++E C G
Sbjct: 455 YAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVC--G 512
Query: 132 MVPHLNELVPFLITCLSDKKALVRAITCWTLSRYSHWVVSQPHDSYLKPLMTEML 186
++P ++ D A VR +L + + + S +KP++ ++
Sbjct: 513 QDITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLT 567
Score = 54.8 bits (130), Expect = 2e-08
Identities = 58/464 (12%), Positives = 136/464 (29%), Gaps = 47/464 (10%)
Query: 71 SDWNLRKCSAAALDVLANVFREELLPVLLPILKETLFHHDWEIKESGILALGAIAEGCMN 130
D L + V E + LLP L+ + +++ + +L AI+
Sbjct: 61 EDEVLLALAEQLGTFTTLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRAISHEHSP 120
Query: 131 GMVPHLNELVPFLITCLSDKKALVRAITCWTLSRYSHWVVSQPHDSYLKPLMTEMLGCMN 190
L L+ L+ + L + VS + L+ +
Sbjct: 121 ---SDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLCSDDT 177
Query: 191 GMV------------------PHLNELVPFLITCLSDKKALVRAITCWTLSRYSHWVVSQ 232
MV +E++P SD++ VR + + + +
Sbjct: 178 PMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQE 237
Query: 233 PHDSYLKPLMTEH------KNLLILYDAIGTLADSVGHHLNKPEYISLLMPPLIQKWNIL 286
++ + P + + + ++ D L +VG + K + + + +
Sbjct: 238 DLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEV 297
Query: 287 KD--------------EDKDLFPLLECLSSVATALQAGFLPYCEPVYRRCVSLIEQTLNQ 332
+ D ++ + L + + + + + L +
Sbjct: 298 RAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGK 357
Query: 333 HMANSQNPEQFDAPDKDFMIVALDLLSGLAEGLDMHIDSLVSNSNIMHLLYQCMQDPMPE 392
F A KD + + ++ I + +++ + + +D
Sbjct: 358 DNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWR 417
Query: 393 VRQSSFALLGDLTKACFSHVHPCISDFMPILGQNLNPDLISVCNNATWAIGEISVKLGED 452
VR + + L + L + ++ AT + ++ K G++
Sbjct: 418 VRLAIIEYMPLLAGQLGVEFFDEK--LNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKE 475
Query: 453 MRRYVPMVINQLIIIINRPNTPKTLLENTAITIGRLGYVCPHDV 496
+I +++ + PN T I L VC D+
Sbjct: 476 --WAHATIIPKVLAMSGDPNYL--HRMTTLFCINVLSEVCGQDI 515
Score = 54.4 bits (129), Expect = 2e-08
Identities = 29/172 (16%), Positives = 56/172 (32%), Gaps = 24/172 (13%)
Query: 72 DWNLRKCSAAALDVLANVFREELLPVLLPILKETLFH-HDWEIKESGILALGAIAEGCMN 130
W +R + +LA E L L H + I+E+ L + E
Sbjct: 415 KWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKF-- 472
Query: 131 GMVPHLNELVPFLITCLSDKKALVRAITCWTLSRYSHWVVSQPHDSYLKPLMTEMLGCMN 190
G ++P ++ D L R T + ++ +L +
Sbjct: 473 GKEWAHATIIPKVLAMSGDPNYLHRMTTLFCIN---------------------VLSEVC 511
Query: 191 GMVPHLNELVPFLITCLSDKKALVRAITCWTLSRYSHWVVSQPHDSYLKPLM 242
G ++P ++ D A VR +L + + + S +KP++
Sbjct: 512 GQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPIL 563
Score = 39.8 bits (91), Expect = 0.001
Identities = 68/499 (13%), Positives = 136/499 (27%), Gaps = 60/499 (12%)
Query: 92 EELLPVLLPILKETLFHHDWEIKESGILALGAIAEGCMNGMVPHLNELVPFLITCLSDKK 151
+ L P + +L + L + D +++ + I L IA G+ +EL+PFL + D+
Sbjct: 7 DSLYP--IAVLIDELRNEDVQLRLNSIKKLSTIALAL--GVERTRSELLPFLTDTIYDED 62
Query: 152 ALVRAITCWTLSRYSHWVVSQPHDSYLKPLMTEMLGCMNGMVPHLNELVPFLITCLSDKK 211
V L ++ V +++ L+P L + + ++
Sbjct: 63 E-VLLALAEQLGTFTTLVGGP---------------------EYVHCLLPPLESLATVEE 100
Query: 212 ALVRAITCWTLSRYSHWVVSQPHDSYLKPLMTEHKNLLILYDAIGTLADSVGHHLNKPEY 271
+VR +L SH +++ PL+ G
Sbjct: 101 TVVRDKAVESLRAISHEHSPSDLEAHFVPLVKRLAG---------------GDWFTSRTS 145
Query: 272 ISLLMPPLIQKWNILKDEDKDLFPLLECLSSVATAL--QAGFLPYCEPVYRRCVSLIEQT 329
L + + +L L S T + +A E + ++
Sbjct: 146 ACGLFSVCYPRVS--SAVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSE 203
Query: 330 LNQHMANSQNPEQFDAPDKDFMIVALDLLSGLAEGLDMHIDSLVSNSNIMHLLYQCMQDP 389
+ +N + EQ + + +M L Q +D
Sbjct: 204 IIPMFSNLASDEQDSVRLLAVEACVNI---------AQLLPQEDLEALVMPTLRQAAEDK 254
Query: 390 MPEVRQSSFALLGDLTKACFSHVHPCISDFMPILGQNLNPDLISVCNNATWAIGEISVKL 449
VR +L KA + +D +P + V A+ + E L
Sbjct: 255 SWRVRYMVADKFTELQKAVGPEITK--TDLVPAFQNLMKDCEAEVRAAASHKVKEFCENL 312
Query: 450 GEDMRRYVP----MVINQLIIIINRPNTPKTLLENTAITIGRLGYVCPHDVAPLCSSLRN 505
D R V + + ++ + L LG + +
Sbjct: 313 SADCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQL 372
Query: 506 IRDNEEKDSAFRGMCAMITVNPGGVVQEFIFFCDAVASWSTPKEDLKEMFHKILHGFRTQ 565
+ E + G V K ++ + + Q
Sbjct: 373 KDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQ 432
Query: 566 VGDENWQRFADQFPDQLRD 584
+G E + +
Sbjct: 433 LGVEFFDEKLNSLCMAWLV 451
Score = 34.0 bits (76), Expect = 0.049
Identities = 29/196 (14%), Positives = 59/196 (30%), Gaps = 30/196 (15%)
Query: 100 PILKETLFHHDWEIKESGILALGAIAEGCMNGMVPHLNELVPFLITCLSDKKALVRAITC 159
P + E W ++ + I + +A +L + L D +R
Sbjct: 405 PAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDE--KLNSLCMAWLVDHVYAIREAAT 462
Query: 160 WTLSRYSHWVVSQPHDSYLKPLMTEMLGCMNGMVPHLNELVPFLITCLSDKKALVRAITC 219
L + L G ++P ++ D L R T
Sbjct: 463 SNLKK---------------------LVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTL 501
Query: 220 WTLSRYSHWVVSQPHDSYLKPL---MTEHKNLLILYDAIGTLADSVGHHLNKPEYISLLM 276
+ ++ S ++ P M + ++ +L +G L+ S +
Sbjct: 502 FCINVLSEVCGQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQK-IGPILDNSTLQSEVK 560
Query: 277 PPLIQKWNILKDEDKD 292
P L + + +D+D D
Sbjct: 561 PILEK---LTQDQDVD 573
Score = 30.9 bits (68), Expect = 0.51
Identities = 57/445 (12%), Positives = 134/445 (30%), Gaps = 30/445 (6%)
Query: 19 DEMIPDRDEDIRPRFHK-------SKRSVKAEGENMNMGENGGEEVEEE-DDDLDDDSSL 70
+ ++R F R A + V+ E + +S
Sbjct: 155 PRVSSAVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASD 214
Query: 71 SDWNLRKCSAAALDVLANVF-REELLPVLLPILKETLFHHDWEIKESGILALGAIAEGCM 129
++R + A +A + +E+L +++P L++ W ++ + +
Sbjct: 215 EQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVG 274
Query: 130 NGMVPHLNELVPFLITCLSDKKALVRAITCWTLSRYSHWVVS----QPHDSYLKPLMTEM 185
+ VP + D +A VRA + + + + S + P + E+
Sbjct: 275 PEITKTDL--VPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKEL 332
Query: 186 LGCMN-GMVPHLNELVPFLITCLSDKKALVRAITCWTLSRYSHWVVSQPHDSYLKPLMTE 244
+ N + L ++ L L + + + + + + E
Sbjct: 333 VSDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNE 392
Query: 245 HKNLLILYDAIGTLADSVGHHLNKPEYISLLMPPLIQKWNILKDEDKDLFPLLECLSSVA 304
+ L ++ L + + + + + + F + S
Sbjct: 393 VIGIRQLSQSLLPAI----VELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDE-KLNSLCM 447
Query: 305 TALQAGFLPYCEPVYRRCVSLIEQTLNQHMANSQNP---EQFDAPDKDFMIVALDLLSGL 361
L E L+E+ + + P P+ + L ++ L
Sbjct: 448 AWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVL 507
Query: 362 AEGLDMHIDSLVSNSNIMHLLYQCMQDPMPEVRQSSFALLGDLTKACFSHVHPCISDFMP 421
+E I + +++ + + DP+ VR + L + + S+ P
Sbjct: 508 SEVCGQDI----TTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNSTL--QSEVKP 561
Query: 422 ILGQNLNPDLISVCNNATWAIGEIS 446
IL + + V A A+ +S
Sbjct: 562 ILEKLTQDQDVDVKYFAQEALTVLS 586
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1
(Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Length = 1207
Score = 64.4 bits (155), Expect = 2e-11
Identities = 39/226 (17%), Positives = 74/226 (32%), Gaps = 46/226 (20%)
Query: 64 LDDDSSLSDWNLRKCSAAALDVLANVFREELLPVLLPILKETLFHHDWEIKESGILALGA 123
L ++ R A L L + E LLP L L + S + A+
Sbjct: 933 LLKHCECAEEGTRNVVAECLGKLTLIDPETLLPRLKGYLI----SGSSYARSSVVTAVKF 988
Query: 124 IAEGCMNGMVPHLNELVPFLITCLSDKKALVRAITCWTLSRYSHWVVSQPHDSYLKPLMT 183
+ P L + + L D VR + T + +H ++P
Sbjct: 989 TISDHPQPIDPLLKNCIGDFLKTLEDPDLNVRRVALVTFNSAAH---NKPSL-------- 1037
Query: 184 EMLGCMNGMVPHLNELVPFLITCLSDKKALVRAITCWTLSRYSHWVVSQPHDSYLKPLMT 243
+ L+ ++P L +K L+R + + + H V
Sbjct: 1038 --------IRDLLDTVLPHLYNETKVRKELIREV---EMGPFKHTV-------------- 1072
Query: 244 EHKNLLIL----YDAIGTLADSVGHHLNKPEYISLLMPPLIQKWNI 285
+ L + ++ + TL DS L+ E+++ + L ++I
Sbjct: 1073 --DDGLDIRKAAFECMYTLLDSCLDRLDIFEFLNHVEDGLKDHYDI 1116
Score = 61.3 bits (147), Expect = 2e-10
Identities = 49/411 (11%), Positives = 120/411 (29%), Gaps = 38/411 (9%)
Query: 52 NGGEEVEEEDDDLDDDSSLSDWNLRKCSAAALDVL---------ANVFREELLPVLLPIL 102
+VE D L + LR S+ L + + + + L
Sbjct: 76 VKEYQVETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRL 135
Query: 103 KETLFHH-DWEIKESGILALGAIAEGCMNGMVPHLNELVPFLITCLSDKKALVRAITCWT 161
+ D ++ + + + +V ++ L+ L+ + VR T
Sbjct: 136 TSAIAKQEDVSVQLEALDIMADMLSRQGGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIA 195
Query: 162 LSRYSHWVVSQPHDSYLKPLMTEML--------------------GCMNGMVPHLNELVP 201
L + ++ L++E+ + + +L +++P
Sbjct: 196 LGHLVMSCGNIVFVDLIEHLLSELSKNDSMSTTRTYIQCIAAISRQAGHRIGEYLEKIIP 255
Query: 202 FLITCLSDKKALVRAITCWTLSRYS--HWVVSQPHDSYLKPLMTEHKNLLILYDAIGTLA 259
++ + +R + PH S + + ++ Y+
Sbjct: 256 LVVKFCNVDDDELREYCIQAFESFVRRCPKEVYPHVSTIINICLKYLTYDPNYNYDDEDE 315
Query: 260 DSVGHHLNKPEYISLLMPPLIQKWNILKDEDKDLFPLLECLSSVATALQAGFLPYCEPVY 319
D + + + + + + +CL +V + + + V
Sbjct: 316 DENAMDADGGDDDDQGSDDEYSDDDDMSWKVRRAA--AKCLDAVVSTRHEMLPEFYKTVS 373
Query: 320 RRCVSLIEQTLNQHMANSQNP--EQFDAPDKDFMIVALDLLSGLAEGLDMHIDSLVSNSN 377
+S ++ A+ + + E + S V N
Sbjct: 374 PALISRFKEREENVKADVFHAYLSLLKQTRPVQSWLCDPDAMEQGETPLTMLQSQV--PN 431
Query: 378 IMHLLYQCMQDPMPEVRQSSFALLGDLTKACFSHVHPCISDFMPILGQNLN 428
I+ L++ M++ + RQ F +L +L + I +P + +LN
Sbjct: 432 IVKALHKQMKEKSVKTRQCCFNMLTELVNVLPGALTQHIPVLVPGIIFSLN 482
Score = 53.2 bits (126), Expect = 7e-08
Identities = 56/481 (11%), Positives = 149/481 (30%), Gaps = 40/481 (8%)
Query: 102 LKETLFHHDWEIKESGILAL-GAIAEGCMNGMVPHLNELVPFLITCLSDKKALVRAITCW 160
L E + D + + L + + + ++V ++ L DK V+ +
Sbjct: 8 LLEKMTSSDKDFRFMATNDLMTELQKDSIKLDDDSERKVVKMILKLLEDKNGEVQNLAVK 67
Query: 161 TLSRYSHWVVSQPHDSYLKPLMTEMLGCMNGMVPHLNELVPFLITCLSDKKALVRAITCW 220
L +VS+ + ++ ++ + M L ++ + K ++ +
Sbjct: 68 CLGP----LVSKVKEYQVETIVDTLCTNMLSDKEQLRDISSIGL------KTVIGELPPA 117
Query: 221 TLSRYSHWVVSQPHDSYLKPLMTEHKNLLILYDAIGTLADSVGHHLNK-PEYISLLMPPL 279
+ V + L + + +++ + +A+ +AD + + ++ L
Sbjct: 118 SSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQGGLLVNFHPSILTCL 177
Query: 280 IQKWNILKDEDKDL-FPLLECLSSVATALQAGFLPYCEPVYRRCVSLIEQTLNQHMANSQ 338
+ L + + L + + + + L ++ +
Sbjct: 178 LP---QLTSPRLAVRKRTIIALGHLVMSCGNIVFVD-----------LIEHLLSELSKND 223
Query: 339 NPEQFDAPDKDFMIVALDLLSGLAEGLDMHIDSLVSNSNIMHLLYQCMQDPMPEVRQSSF 398
+ + ++ ++ I + I+ L+ + E+R+
Sbjct: 224 SMSTTRT--------YIQCIAAISRQAGHRIGEYL--EKIIPLVVKFCNVDDDELREYCI 273
Query: 399 ALLGDLTKACFSHVHPCISDFMPILGQNLNPDLISVCNNATWAIGEISVKLGEDMRRYVP 458
+ C V+P +S + I + L D ++ + G+D +
Sbjct: 274 QAFESFVRRCPKEVYPHVSTIINICLKYLTYDPNYNYDDEDEDENAMDADGGDDDDQGSD 333
Query: 459 MVINQLIIIINRP-NTPKTLLENTAITIGRLGYVCPHDVAPLCSSLRNIRDNEEKDSAFR 517
+ + + L+ T + V+P S R+ K F
Sbjct: 334 DEYSDDDDMSWKVRRAAAKCLDAVVSTRHEMLPEFYKTVSPALISRFKEREENVKADVFH 393
Query: 518 GMCAMITVNPGGVVQEFIFFCDAVASWSTPKEDLKEMFHKILHGFRTQVGDENWQRFADQ 577
+++ VQ ++ DA+ TP L+ I+ Q+ +++ +
Sbjct: 394 AYLSLLKQTR--PVQSWLCDPDAMEQGETPLTMLQSQVPNIVKALHKQMKEKSVKTRQCC 451
Query: 578 F 578
F
Sbjct: 452 F 452
Score = 44.7 bits (104), Expect = 3e-05
Identities = 45/369 (12%), Positives = 97/369 (26%), Gaps = 48/369 (13%)
Query: 55 EEVEEEDDDLDDDSSLSDWNLRKCSAAALDVLANVFREELLPVLLPILKETLFHHDWEIK 114
+ E L L L ++ LL +L ++ +
Sbjct: 729 GSILNELIGLVRSPLLQGGALSAMLDFFQALVVTGTNNLGYMDLLRMLTGPVYSQSTALT 788
Query: 115 ESGILALGAIAEGCMNGMVPHLNELVPFLITCLSDKKALVRAITCWTLSRYSHWVVSQPH 174
A + C + A+V + S +
Sbjct: 789 HKQSYYSIAKCVAAL-------------TRACPKEGPAVVGQFIQDVKNSRSTDSIRLLA 835
Query: 175 DSYLKPLMTEMLGCMNGMVPHLNELVPFLITCLSDKKALVRAITCWTLSRYSHWVVSQPH 234
L + + + EL ++ S V++ + L S + +
Sbjct: 836 LLSLGEVGHHI------DLSGQLELKSVILEAFSSPSEEVKSAASYALGSISVGNLPEYL 889
Query: 235 DSYLKPLMTEHKNLLILYDAIGTLADSVGHHLNKPEYISLLMPPLIQKWNILKDEDKDLF 294
L+ + ++ K +L ++ + S KP Y+ + L++ + E+
Sbjct: 890 PFVLQEITSQPKRQYLLLHSLKEIISSASVVGLKP-YVENIWALLLK--HCECAEEGTRN 946
Query: 295 PLLECLSSVATALQAGFLPYCEPVYRRCVSLIEQTLNQHMANSQNPEQFDAPDKDFMIVA 354
+ ECL + LP + S +
Sbjct: 947 VVAECLGKLTLIDPETLLPRL----------------KGYLISGSSYA--------RSSV 982
Query: 355 LDLLSGLAEGLDMHIDSLVSNSNIMHLLYQCMQDPMPEVRQSSFALLGDLTKACFSHVHP 414
+ + ID L+ N + + ++DP VR+ + S +
Sbjct: 983 VTAVKFTISDHPQPIDPLLKN--CIGDFLKTLEDPDLNVRRVALVTFNSAAHNKPSLIRD 1040
Query: 415 CISDFMPIL 423
+ +P L
Sbjct: 1041 LLDTVLPHL 1049
Score = 40.5 bits (93), Expect = 6e-04
Identities = 54/423 (12%), Positives = 133/423 (31%), Gaps = 89/423 (21%)
Query: 67 DSSLSDWNLRKCSAAALDVLANVFREELLPVLLPILKETLFHHDWEIKESGILALGAIAE 126
+S S ++R + +L + + L ++ E E+K + ALG+I+
Sbjct: 823 KNSRSTDSIRLLALLSLGEVGHHIDLSGQLELKSVILEAFSSPSEEVKSAASYALGSIS- 881
Query: 127 GCMNGMVPHLNELVPFLITCLSDKKALVRAITCWTLSRYSHWVVSQPHDSYLKPLMTEML 186
V +L E +PF++ ++ + + LK +++
Sbjct: 882 ------VGNLPEYLPFVLQEITSQPKRQYLLLHS-----------------LKEIISSAS 918
Query: 187 GCMNGMVPHLNELVPFLITCLSDKKALVRAITCWTLSRYSHWVVSQPHDSYLKPLMT--E 244
+ G+ P++ + L+ + R + L + + ++ L L
Sbjct: 919 --VVGLKPYVENIWALLLKHCECAEEGTRNVVAECLGK----LTLIDPETLLPRLKGYLI 972
Query: 245 HKNLLILYDAIGTLADSVGHHLNKP-EYISLLMPPLIQKWNILKDEDKDLFPL-LECLSS 302
+ + + ++ H + + ++ L+D D ++ + L +S
Sbjct: 973 SGSSYARSSVVTAVKFTISDHPQPIDPLLKNCIGDFLK---TLEDPDLNVRRVALVTFNS 1029
Query: 303 VATALQAGFLPYCEPVYRRCVSLIEQTLNQHMANSQNPEQFDAPDKDFMIVALDLLSGLA 362
A + + V L +T V +L+ +
Sbjct: 1030 AAHNKPSLIRDLLDTVLPH---LYNET----------------------KVRKELIREVE 1064
Query: 363 EGLDMHIDSLVSNSNIMHLLYQCMQDPMPEVRQSSFALLGDLTKACFSHVHPCISDFMPI 422
G H D ++R+++F + L +C + I +F+
Sbjct: 1065 MGPFKHT-----------------VDDGLDIRKAAFECMYTLLDSCLDRLD--IFEFLNH 1105
Query: 423 L--GQNLNPDLISVCNNATWAIGEISVKLGEDMRRYVPMVINQLIIIIN---RPNTPKTL 477
+ G + D+ + + +S + + + ++ L + N+ K
Sbjct: 1106 VEDGLKDHYDIKMLTFL---MLVRLSTLCPSAVLQRLDRLVEPLRATCTTKVKANSVKQE 1162
Query: 478 LEN 480
E
Sbjct: 1163 FEK 1165
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 584
Score = 59.4 bits (143), Expect = 7e-10
Identities = 54/426 (12%), Positives = 131/426 (30%), Gaps = 62/426 (14%)
Query: 80 AAALDVLANVFREELLPVLLPILKE--TLFHHDWEIKESGILALGAIAEGCMNGMVPHLN 137
AL +ANV E+ + + +K+S L L + + + +
Sbjct: 121 GLALHCIANVGSREMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYR--TSPDLVPMG 178
Query: 138 ELVPFLITCLSDKKALVRAITCWTLSRYSH------WVVSQPHDSYLKPLMTEMLGCMNG 191
+ ++ L+D+ V ++ + S L ++T +
Sbjct: 179 DWTSRVVHLLNDQHLGVVTAATSLITTLAQKNPEEFKTSVSLAVSRLSRIVTSASTDLQD 238
Query: 192 MVPHLNELVPFLITCLSDKKALVRAITCWTLSRYSHWVVSQPHDSYLKP----LMTEHKN 247
+ + L + R + + + + + P + +
Sbjct: 239 YTYYFVPAPWLSVKLLRLLQCYPPPEDPAVRGRLTECLETILNKAQEPPKSKKVQHSNAK 298
Query: 248 LLILYDAIGTLADSVGHHLNKPEYISLLMPPLIQKWNILKDEDKDL-FPLLECLSSVATA 306
+L++AI + HH ++P + L Q L+ + +L + LE + ++A
Sbjct: 299 NAVLFEAISLII----HHDSEPNLLVRACNQLGQ---FLQHRETNLRYLALESMCTLA-- 349
Query: 307 LQAGFLPYCEPVYRRCVSLIEQTLNQHMANSQNPEQFDAPDKDFMIVALDLLSGLAEGLD 366
E + + IE +N D A+DLL
Sbjct: 350 -------SSEFSHEAVKTHIETVINALKTE---------RDVSVRQRAVDLLY------- 386
Query: 367 MHIDSLVSNSN---IMHLLYQCMQDPMPEVRQSSFALLGDLTKACFSHVHPCISDFMPIL 423
++ SN I+ + ++ +R+ + L + + + ++
Sbjct: 387 ----AMCDRSNAQQIVAEMLSYLETADYSIREEIVLKVAILAEKYAVDYTWYVDTILNLI 442
Query: 424 GQNLNPDLISVCNNATWAIGEISVKLGEDMRRYVPMVINQLIIIINRPNTPKTLLENTAI 483
+ V + + +I + +D++ Y + + P + L++
Sbjct: 443 RIAGD----YVSEEVWYRVIQIVINR-DDVQGY---AAKTVFEALQAPACHENLVKVGGY 494
Query: 484 TIGRLG 489
+G G
Sbjct: 495 ILGEFG 500
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment
{Human (Homo sapiens) [TaxId: 9606]}
Length = 579
Score = 54.4 bits (130), Expect = 3e-08
Identities = 54/402 (13%), Positives = 129/402 (32%), Gaps = 51/402 (12%)
Query: 80 AAALDVLANVFREELLPVLLPILKETLFHHDWEIKESGILALGAIAEGCMNGMVPHLNEL 139
A A+ + + +++ L L++ L D ++++ + + + +N +
Sbjct: 101 ALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLH--DINAQMVEDQGF 158
Query: 140 VPFLITCLSDKKALVRAITCWTLSRYSHWVVSQPHDSYLKPLMTEMLGCMNGMVPHLNEL 199
+ L ++D +V A L + +S L L +
Sbjct: 159 LDSLRDLIADSNPMVVANAVAAL----SEISESHPNSNLLDL--------------NPQN 200
Query: 200 VPFLITCLSDKKALVRAITCWTLSRYSHWVVSQPHDSYLKPLMT--EHKNLLILYDAIGT 257
+ L+T L++ + LS Y+ + S + + H N ++ A+
Sbjct: 201 INKLLTALNECTEWGQIFILDCLSNYNPKDDRE-AQSICERVTPRLSHANSAVVLSAVKV 259
Query: 258 LADSVGHHLNKPEYISLLMPPLIQKWNILKDEDKDL-FPLLECLSSVATALQAGFLPYCE 316
L + +Y ++L+ L L + ++ + L ++ + +
Sbjct: 260 LMKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIK 319
Query: 317 PVYRR-----CVSLIEQTLNQHMANSQNPEQF--------DAPDKDFMIVALDLLSGLAE 363
+ + V L + + +A+ N Q D DF+ A+ +
Sbjct: 320 VFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIG---- 375
Query: 364 GLDMHIDSLVSNSNIMHLLYQCMQDPMPEVRQSSFALLGDLTKACFSHVHPCISDFMPIL 423
I S + L +Q + V Q + ++ D+ + + I+ L
Sbjct: 376 --RCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENL 433
Query: 424 GQNLNPDLISVCNNATWAIGEISVKLGEDMRRYVPMVINQLI 465
PD + W +GE + + ++ +
Sbjct: 434 DSLDEPDARAA---MIWIVGEYA-----ERIDNADELLESFL 467
Score = 40.1 bits (93), Expect = 7e-04
Identities = 20/150 (13%), Positives = 45/150 (30%), Gaps = 18/150 (12%)
Query: 82 ALDVLANVFREELLPVLLPILKETLFHHDWEIKESGILALGAIAEGCMNGMVPHLNELVP 141
LD++ + + + +L LKE D + + A+G A + V
Sbjct: 335 KLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIK----VEQSAERCVS 390
Query: 142 FLITCLSDKKALVRAITCWTLSR--------------YSHWVVSQPHDSYLKPLMTEMLG 187
L+ + K V + + + + M ++G
Sbjct: 391 TLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVG 450
Query: 188 CMNGMVPHLNELVPFLITCLSDKKALVRAI 217
+ + +EL+ + D+ V+
Sbjct: 451 EYAERIDNADELLESFLEGFHDESTQVQLT 480
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 264
Score = 38.1 bits (87), Expect = 0.002
Identities = 29/196 (14%), Positives = 72/196 (36%), Gaps = 10/196 (5%)
Query: 344 DAPDKDFMIVALDLLSGLAEGLDMHIDSLVSNSNIMHLLYQCMQDPMPEVRQSSFALLGD 403
A D+ AL+LL+ L E +D D S + L+ + ++ +R + L+G
Sbjct: 27 QAADQQEREGALELLADLCENMDNAAD-FCQLSGMHLLVGRYLEAGAAGLRWRAAQLIGT 85
Query: 404 LTKACFSHVHPCISD--FMPILGQNLNPDLISVCNNATWAIGEISVKLGEDMRRYVPMVI 461
++ + + +L +V A +AI + + + +++ +
Sbjct: 86 CSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDG 145
Query: 462 NQLIIIINRPNTPKTLLENTAIT-------IGRLGYVCPHDVAPLCSSLRNIRDNEEKDS 514
+++ + K +++ + G +C + +L + +
Sbjct: 146 FSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVALVRTEHSPFHEH 205
Query: 515 AFRGMCAMITVNPGGV 530
+C+++T P GV
Sbjct: 206 VLGALCSLVTDFPQGV 221
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 457
Score = 38.7 bits (88), Expect = 0.002
Identities = 50/447 (11%), Positives = 117/447 (26%), Gaps = 26/447 (5%)
Query: 99 LPILKETLFHHDWEIKESGILALGAIAEGC-MNGMVPHLNELVPFLITCLSDKKALVRAI 157
+P + L D + + G + + + L+ L V+
Sbjct: 4 IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQA 63
Query: 158 TCWTLSRYSHW----VVSQPHDSYLKPLMTEMLGCMNGMVPHLNELVPFLITCLSDKKAL 213
L + + ++ ++ + N + + + ++ + K
Sbjct: 64 AAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEE 123
Query: 214 VRAITCWTLSRYSHWVVSQPHDSYLKPLMTEHKNLLILYDAIGTLADSVGHHLNKPEYIS 273
+ A L+ S D + E + + ++A G L + + +
Sbjct: 124 LIADALPVLADRVIIPFSGWCDGNS-NMSREVVDPEVFFNATGCLRNLSSADAGRQTMRN 182
Query: 274 LLMPPLIQKWNILKDEDKDLFPLLECLSSVATALQAGFLPYCEPVYRRCVSLIEQTLNQH 333
+ +++ + + + L V R L N +
Sbjct: 183 -YSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAY 241
Query: 334 MANSQNPEQFDAPDKDFMIVALDLLSGLAEGLDMHIDSLVSNSNIMHLLYQCMQDPMPEV 393
+ F M D E L + I L +
Sbjct: 242 T-EKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDAT 300
Query: 394 RQSSFALLGDLT------KACFSHVHPCISDFMPILGQNLNPDLISVCNNATWAIGEIS- 446
++ L +LT + S + +P + + L V + + +S
Sbjct: 301 LEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSR 360
Query: 447 -VKLGEDMRRY-VPMVINQLIIIINRPNTPKTLLENTAITIGRLGYVCPHD--------- 495
L M P V L + + +L + T+ L P
Sbjct: 361 HPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSM 420
Query: 496 VAPLCSSLRNIRDNEEKDSAFRGMCAM 522
+ + + R+ + ++A + M
Sbjct: 421 LNNIINLCRSSASPKAAEAARLLLSDM 447
Score = 35.6 bits (80), Expect = 0.015
Identities = 40/425 (9%), Positives = 111/425 (26%), Gaps = 23/425 (5%)
Query: 71 SDWNLRKCSAAALDVLANVFREELLPVL----LPILKETLFHHDWEIKESGILALGAIAE 126
D + A + V + L + L + ++++ AL +
Sbjct: 14 QDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVF 73
Query: 127 GCMNG--MVPHLNELVPFLITCLSDKKALVRAITCWTLSRYSH------WVVSQPHDSYL 178
N + + A ++ L S +++
Sbjct: 74 RSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIADALPVLA 133
Query: 179 KPLMTEMLGCMNGMVPHLNEL--VPFLITCLSDKKALVRAITCWTLSRYSHWVVSQPHDS 236
++ G +G E+ + L A R ++
Sbjct: 134 DRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRNLSSADAGRQTMRNYSGLIDSLMAY 193
Query: 237 YLKPLMTEHKNLLILYDAIGTLADSVGHHLNKPEYISLLMPPLIQKWNILKDEDKDLFPL 296
+ + + + + L + + + + K
Sbjct: 194 VQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNK 253
Query: 297 LECLSSVATALQAGFLPYCEPVYRRCVSLIEQTLNQHMANSQNPEQFDAPDKDFMIVALD 356
+ + LP E + L + N + DA + +
Sbjct: 254 SD---KMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQN 310
Query: 357 LLSGLAEGLDMHIDSLVSNSNIMHLLYQCMQDPMPEVRQSSFALLGDLTKACFSH---VH 413
L + + + + + +Q +V +S +LL ++++ H +
Sbjct: 311 LTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLLHRVMGN 370
Query: 414 PCISDFMPIL--GQNLNPDLISVCNNATWAIGEISVKLGEDMRRYVPM-VINQLIIIINR 470
+ +L + + ++A + + + + ++Y ++N +I +
Sbjct: 371 QVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRS 430
Query: 471 PNTPK 475
+PK
Sbjct: 431 SASPK 435
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId:
9606]}
Length = 529
Score = 31.4 bits (69), Expect = 0.32
Identities = 15/102 (14%), Positives = 29/102 (28%), Gaps = 3/102 (2%)
Query: 68 SSLSDWNLRKCSAAALDVLANVFREELLPV---LLPILKETLFHHDWEIKESGILALGAI 124
+ + + AL +LA ++ +P+ + L+ I+ L +
Sbjct: 428 EGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCEL 487
Query: 125 AEGCMNGMVPHLNELVPFLITCLSDKKALVRAITCWTLSRYS 166
A+ L L + V L R S
Sbjct: 488 AQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMS 529
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli
[TaxId: 562]}
Length = 276
Score = 29.8 bits (65), Expect = 0.86
Identities = 13/73 (17%), Positives = 21/73 (28%), Gaps = 10/73 (13%)
Query: 102 LKETLFHHDWEIKESGILALGAIAEGCMNGMVPHLNELVPFLITCLSDKKALVRAITCWT 161
L L H+ + S L + V I SDK + R I +
Sbjct: 24 LFRLLDDHNSLKRISSARVLQLRGG----------QDAVRLAIEFCSDKNYIRRDIGAFI 73
Query: 162 LSRYSHWVVSQPH 174
L + + +
Sbjct: 74 LGQIKICKKCEDN 86
>d2ckxa1 a.4.1.3 (A:578-660) Telomere binding protein TBP1 {Tobacco
(Nicotiana tabacum) [TaxId: 4097]}
Length = 83
Score = 26.6 bits (58), Expect = 2.7
Identities = 7/44 (15%), Positives = 14/44 (31%), Gaps = 3/44 (6%)
Query: 544 WSTPKED--LKEMFHKILHGFRTQVGDENWQRFADQFPDQLRDR 585
+ + E L E + G V + + L+D+
Sbjct: 3 F-SVAEVEALVEAVEHLGTGRWRDVKMRAFDNADHRTYVDLKDK 45
>d1rsob_ a.194.1.1 (B:) Peripheral plasma membrane protein cask
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 56
Score = 25.1 bits (55), Expect = 5.3
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Query: 53 GGEEVEEEDDDLDDDSSLSDWNLRKCSAAALDVLANVFREELLPVLL 99
V + D L++ +L+D S LD L +VF+++ L LL
Sbjct: 5 AERAVSQVLDSLEEIHALTD-----SSEKDLDFLHSVFQDQHLHTLL 46
>d1w9ca_ a.118.1.19 (A:) Exportin-1 (Xpo1, Crm1) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 321
Score = 26.7 bits (59), Expect = 7.5
Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 9/64 (14%)
Query: 354 ALDLLSGLAEGLDMHIDSLVSNSNIMHLLYQCMQDPM-------PEVRQSSFALLGDLTK 406
L ++ + L HI + + I +++C + + PE R + F LL +
Sbjct: 94 VLSTMAIIVNKLGGHITAEIPQ--IFDAVFECTLNMINKDFEEYPEHRTNFFLLLQAVNS 151
Query: 407 ACFS 410
CF
Sbjct: 152 HCFP 155
>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206
{Streptomyces coelicolor [TaxId: 1902]}
Length = 148
Score = 26.1 bits (57), Expect = 7.7
Identities = 12/70 (17%), Positives = 21/70 (30%)
Query: 130 NGMVPHLNELVPFLITCLSDKKALVRAITCWTLSRYSHWVVSQPHDSYLKPLMTEMLGCM 189
G L++ VP + L+ + W S ++V L L T +
Sbjct: 28 TGFHFLLDKRVPATMEPLAPALKELAGEHGWDASDLDFYIVHAGGPRILDDLSTFLEVDP 87
Query: 190 NGMVPHLNEL 199
+ L
Sbjct: 88 HAFRFSRATL 97
>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS
{Rhodothermus marinus [TaxId: 29549]}
Length = 381
Score = 26.9 bits (59), Expect = 8.9
Identities = 12/126 (9%), Positives = 27/126 (21%), Gaps = 10/126 (7%)
Query: 64 LDDDSSLSDWNLRKCSAAALDVLANVFREELLPVLLPILKETLFHHDWEIKESGILALGA 123
+ + +A + L L L+ +
Sbjct: 33 CIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGDGMNTALRYFLEETQW 92
Query: 124 IAEGCMNG-MVPHLNELVPFLITCLSDKKALVRAITCWTLSRYS-----HWVVSQPHDSY 177
+ + + + LVR R S W++++ +
Sbjct: 93 ERIHFYDADITSFGPDWITKAEEAADFGYGLVRHY----FPRASTDAMITWMITRTGFAL 148
Query: 178 LKPLMT 183
L P
Sbjct: 149 LWPHTE 154
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.137 0.425
Gapped
Lambda K H
0.267 0.0500 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,297,769
Number of extensions: 109399
Number of successful extensions: 369
Number of sequences better than 10.0: 1
Number of HSP's gapped: 317
Number of HSP's successfully gapped: 48
Length of query: 592
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 502
Effective length of database: 1,171,896
Effective search space: 588291792
Effective search space used: 588291792
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (25.9 bits)