BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9906
(191 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BFY9|TNPO1_MOUSE Transportin-1 OS=Mus musculus GN=Tnpo1 PE=1 SV=2
Length = 898
Score = 210 bits (535), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 110/142 (77%), Positives = 123/142 (86%)
Query: 3 WQPQEEGLIQILQLLKESQSPDNLIQRAVQHKLEQLNTHPDFNNYLIFVLTKLTSEDEPT 62
W+P E+GL QILQLLKESQSPD IQR VQ KLEQLN +PDFNNYLIFVLTKL SEDEPT
Sbjct: 13 WKPDEQGLQQILQLLKESQSPDTTIQRTVQQKLEQLNQYPDFNNYLIFVLTKLKSEDEPT 72
Query: 63 RSLSGLILKNNVRARFYEFPPGVSEFIKQECLSAIGDPSPLIRATVGILITTIASKGDLK 122
RSLSGLILKNNV+A F FP GV++FIK ECL+ IGD SPLIRATVGILITTIASKG+L+
Sbjct: 73 RSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASKGELQ 132
Query: 123 SWPELLPTLNDMLDSQDYNVCE 144
+WP+LLP L +LDS+DYN CE
Sbjct: 133 NWPDLLPKLCSLLDSEDYNTCE 154
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 30/34 (88%)
Query: 144 ELLPVLLPILKETLFHHDWEIKESGILALGAIAE 177
ELLP +LP+LKE LFHH+W +KESGIL LGAIAE
Sbjct: 401 ELLPHILPLLKELLFHHEWVVKESGILVLGAIAE 434
>sp|Q3SYU7|TNPO1_BOVIN Transportin-1 OS=Bos taurus GN=TNPO1 PE=2 SV=2
Length = 898
Score = 210 bits (535), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 110/142 (77%), Positives = 123/142 (86%)
Query: 3 WQPQEEGLIQILQLLKESQSPDNLIQRAVQHKLEQLNTHPDFNNYLIFVLTKLTSEDEPT 62
W+P E+GL QILQLLKESQSPD IQR VQ KLEQLN +PDFNNYLIFVLTKL SEDEPT
Sbjct: 13 WKPDEQGLQQILQLLKESQSPDTTIQRTVQQKLEQLNQYPDFNNYLIFVLTKLKSEDEPT 72
Query: 63 RSLSGLILKNNVRARFYEFPPGVSEFIKQECLSAIGDPSPLIRATVGILITTIASKGDLK 122
RSLSGLILKNNV+A F FP GV++FIK ECL+ IGD SPLIRATVGILITTIASKG+L+
Sbjct: 73 RSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASKGELQ 132
Query: 123 SWPELLPTLNDMLDSQDYNVCE 144
+WP+LLP L +LDS+DYN CE
Sbjct: 133 NWPDLLPKLCSLLDSEDYNTCE 154
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 30/34 (88%)
Query: 144 ELLPVLLPILKETLFHHDWEIKESGILALGAIAE 177
ELLP +LP+LKE LFHH+W +KESGIL LGAIAE
Sbjct: 401 ELLPHILPLLKELLFHHEWVVKESGILVLGAIAE 434
>sp|Q92973|TNPO1_HUMAN Transportin-1 OS=Homo sapiens GN=TNPO1 PE=1 SV=2
Length = 898
Score = 210 bits (535), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 110/142 (77%), Positives = 123/142 (86%)
Query: 3 WQPQEEGLIQILQLLKESQSPDNLIQRAVQHKLEQLNTHPDFNNYLIFVLTKLTSEDEPT 62
W+P E+GL QILQLLKESQSPD IQR VQ KLEQLN +PDFNNYLIFVLTKL SEDEPT
Sbjct: 13 WKPDEQGLQQILQLLKESQSPDTTIQRTVQQKLEQLNQYPDFNNYLIFVLTKLKSEDEPT 72
Query: 63 RSLSGLILKNNVRARFYEFPPGVSEFIKQECLSAIGDPSPLIRATVGILITTIASKGDLK 122
RSLSGLILKNNV+A F FP GV++FIK ECL+ IGD SPLIRATVGILITTIASKG+L+
Sbjct: 73 RSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASKGELQ 132
Query: 123 SWPELLPTLNDMLDSQDYNVCE 144
+WP+LLP L +LDS+DYN CE
Sbjct: 133 NWPDLLPKLCSLLDSEDYNTCE 154
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 30/34 (88%)
Query: 144 ELLPVLLPILKETLFHHDWEIKESGILALGAIAE 177
ELLP +LP+LKE LFHH+W +KESGIL LGAIAE
Sbjct: 401 ELLPHILPLLKELLFHHEWVVKESGILVLGAIAE 434
>sp|Q99LG2|TNPO2_MOUSE Transportin-2 OS=Mus musculus GN=Tnpo2 PE=2 SV=1
Length = 887
Score = 200 bits (509), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 104/144 (72%), Positives = 122/144 (84%)
Query: 1 MAWQPQEEGLIQILQLLKESQSPDNLIQRAVQHKLEQLNTHPDFNNYLIFVLTKLTSEDE 60
M WQP E+GL Q+LQLLK+SQSP+ QR VQ KL+QLN PDFNNYLIFVLT+L SEDE
Sbjct: 1 MDWQPDEQGLQQVLQLLKDSQSPNTATQRIVQDKLKQLNQFPDFNNYLIFVLTRLKSEDE 60
Query: 61 PTRSLSGLILKNNVRARFYEFPPGVSEFIKQECLSAIGDPSPLIRATVGILITTIASKGD 120
PTRSLSGLILKNNV+A + FPP V++FIKQECL+ IGD S LIRAT+GILITTIASKG+
Sbjct: 61 PTRSLSGLILKNNVKAHYQSFPPPVADFIKQECLNNIGDASSLIRATIGILITTIASKGE 120
Query: 121 LKSWPELLPTLNDMLDSQDYNVCE 144
L+ WPELLP L ++L+S+DYN CE
Sbjct: 121 LQMWPELLPQLCNLLNSEDYNTCE 144
Score = 36.2 bits (82), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/20 (75%), Positives = 17/20 (85%)
Query: 158 FHHDWEIKESGILALGAIAE 177
FH +W +KESGIL LGAIAE
Sbjct: 404 FHPEWVVKESGILVLGAIAE 423
>sp|O14787|TNPO2_HUMAN Transportin-2 OS=Homo sapiens GN=TNPO2 PE=1 SV=3
Length = 897
Score = 200 bits (509), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 104/144 (72%), Positives = 122/144 (84%)
Query: 1 MAWQPQEEGLIQILQLLKESQSPDNLIQRAVQHKLEQLNTHPDFNNYLIFVLTKLTSEDE 60
M WQP E+GL Q+LQLLK+SQSP+ QR VQ KL+QLN PDFNNYLIFVLT+L SEDE
Sbjct: 1 MDWQPDEQGLQQVLQLLKDSQSPNTATQRIVQDKLKQLNQFPDFNNYLIFVLTRLKSEDE 60
Query: 61 PTRSLSGLILKNNVRARFYEFPPGVSEFIKQECLSAIGDPSPLIRATVGILITTIASKGD 120
PTRSLSGLILKNNV+A + FPP V++FIKQECL+ IGD S LIRAT+GILITTIASKG+
Sbjct: 61 PTRSLSGLILKNNVKAHYQSFPPPVADFIKQECLNNIGDASSLIRATIGILITTIASKGE 120
Query: 121 LKSWPELLPTLNDMLDSQDYNVCE 144
L+ WPELLP L ++L+S+DYN CE
Sbjct: 121 LQMWPELLPQLCNLLNSEDYNTCE 144
Score = 36.2 bits (82), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/20 (75%), Positives = 17/20 (85%)
Query: 158 FHHDWEIKESGILALGAIAE 177
FH +W +KESGIL LGAIAE
Sbjct: 404 FHPEWVVKESGILVLGAIAE 423
>sp|B9FDR3|TNPO1_ORYSJ Transportin-1 OS=Oryza sativa subsp. japonica GN=TRN1 PE=3 SV=2
Length = 891
Score = 110 bits (275), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 84/156 (53%), Gaps = 12/156 (7%)
Query: 3 WQPQEEGLIQILQLLKESQSPDNLIQRAVQHKLEQLNTHPDFNNYLIFVLTKLTSEDEPT 62
WQPQEEGL +I LL SP N Q + +L+ + PDFNNYL+F+L + +
Sbjct: 8 WQPQEEGLREICTLLDAHISP-NSDQARIWQQLQHYSQFPDFNNYLVFLLARGEGKSFEA 66
Query: 63 RSLSGLILKNNVRARFYEFPPGVSEFIKQECLSAIGDPSPLIRATVGILITTIASKGDLK 122
R +GL+LKNN+RA F PP +++K E L IG + IR+TVG +I+ + +
Sbjct: 67 RQAAGLLLKNNLRATFSSMPPASQQYVKSELLPCIGATNKAIRSTVGTVISVLFQIVRVA 126
Query: 123 SWPELLPTLNDMLDSQD-----------YNVCELLP 147
W EL L+ LDS D Y +CE +P
Sbjct: 127 GWIELFQALHQCLDSNDLDHMEGAMDAIYKICEDVP 162
Score = 33.9 bits (76), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 27/37 (72%), Gaps = 3/37 (8%)
Query: 144 ELLPVLLPILKETLFHHD---WEIKESGILALGAIAE 177
++LP L+P++++ L D W+ +E+ +L++GAIAE
Sbjct: 385 DILPTLMPLIQQNLARTDDDAWKEREAAVLSIGAIAE 421
>sp|B8ARW2|TNPO1_ORYSI Transportin-1 OS=Oryza sativa subsp. indica GN=OsI_18044 PE=2 SV=1
Length = 890
Score = 110 bits (275), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 84/156 (53%), Gaps = 12/156 (7%)
Query: 3 WQPQEEGLIQILQLLKESQSPDNLIQRAVQHKLEQLNTHPDFNNYLIFVLTKLTSEDEPT 62
WQPQEEGL +I LL SP N Q + +L+ + PDFNNYL+F+L + +
Sbjct: 7 WQPQEEGLREICTLLDAHISP-NSDQARIWQQLQHYSQFPDFNNYLVFLLARGEGKSFEA 65
Query: 63 RSLSGLILKNNVRARFYEFPPGVSEFIKQECLSAIGDPSPLIRATVGILITTIASKGDLK 122
R +GL+LKNN+RA F PP +++K E L IG + IR+TVG +I+ + +
Sbjct: 66 RQAAGLLLKNNLRATFSSMPPASQQYVKSELLPCIGATNKAIRSTVGTVISVLFQIVRVA 125
Query: 123 SWPELLPTLNDMLDSQD-----------YNVCELLP 147
W EL L+ LDS D Y +CE +P
Sbjct: 126 GWIELFQALHQCLDSNDLDHMEGAMDAIYKICEDVP 161
Score = 33.9 bits (76), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 27/37 (72%), Gaps = 3/37 (8%)
Query: 144 ELLPVLLPILKETLFHHD---WEIKESGILALGAIAE 177
++LP L+P++++ L D W+ +E+ +L++GAIAE
Sbjct: 384 DILPTLMPLIQQNLARTDDDAWKEREAAVLSIGAIAE 420
>sp|Q8H0U4|TNPO1_ARATH Transportin-1 OS=Arabidopsis thaliana GN=TRN1 PE=1 SV=1
Length = 891
Score = 103 bits (257), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 89/162 (54%), Gaps = 12/162 (7%)
Query: 1 MAWQPQEEGLIQILQLLKESQSPDNLIQRA-VQHKLEQLNTHPDFNNYLIFVLTKLTSED 59
+ WQP+++GL +I LL++ SP +++ ++ + +L+ + PDFNNYL+F+L + +
Sbjct: 6 VVWQPRDDGLAEICSLLEQQISPSSVVDKSQIWKQLQHFSQFPDFNNYLVFILVRAEGKS 65
Query: 60 EPTRSLSGLILKNNVRARFYEFPPGVSEFIKQECLSAIGDPSPLIRATVGILITTIASKG 119
R +GL+LKNN+R + ++IK E L +G IR TVG +I+ I +
Sbjct: 66 VEVRQAAGLLLKNNLRGAYPSMTQENQKYIKSELLPCLGAADRNIRTTVGTIISVIVNIE 125
Query: 120 DLKSWPELLPTLNDMLDSQDYN-----------VCELLPVLL 150
+ W ELLP L LDS D N +CE +P +L
Sbjct: 126 GVSGWHELLPALVTCLDSNDLNHMDGAMDALSKICEDIPHVL 167
Score = 33.9 bits (76), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 3/37 (8%)
Query: 144 ELLPVLLPILKETLF---HHDWEIKESGILALGAIAE 177
E+LP L+P++++ L W+ +E+ +LALGAIAE
Sbjct: 386 EILPALMPLIQKNLSASGDEAWKQREAAVLALGAIAE 422
>sp|Q55CQ7|TNPO_DICDI Transportin OS=Dictyostelium discoideum GN=tnpo PE=3 SV=1
Length = 931
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 84/143 (58%), Gaps = 3/143 (2%)
Query: 3 WQPQEEGLIQILQLLKESQSPDNLIQRAVQHKLEQLNTHPDFNNYLIFVLTKLTSEDEP- 61
W P ++GL Q++ +L S S + ++ +L++ ++ PD+NNYL + ++E +P
Sbjct: 4 WVPNQDGLKQLVYVLNLSNSTSREVHDQIREELDKFHSVPDYNNYLTLIFK--SNELQPH 61
Query: 62 TRSLSGLILKNNVRARFYEFPPGVSEFIKQECLSAIGDPSPLIRATVGILITTIASKGDL 121
RS++GL+LK N++ F + P V +IK+E L + DP +R TVG +IT + K
Sbjct: 62 IRSVAGLVLKTNIKQYFEKMPREVQNYIKREILPVLSDPDASVRHTVGNIITNLIKKSCF 121
Query: 122 KSWPELLPTLNDMLDSQDYNVCE 144
WPELLP LN LDS ++ E
Sbjct: 122 SEWPELLPALNLALDSNSQDLIE 144
Score = 35.0 bits (79), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 143 CELLPVLLPILKETLFHHD-WEIKESGILALGAIAEVNKS 181
E L V LP++++ + + W ++ES ILALGAIA+ +K+
Sbjct: 425 AEYLSVTLPLIEQRMNEQNPWPVRESAILALGAIADGSKN 464
>sp|O14089|IMB2_SCHPO Importin subunit beta-2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=kap104 PE=3 SV=1
Length = 910
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 77/137 (56%), Gaps = 2/137 (1%)
Query: 3 WQPQEEGLIQILQLLKESQSPDNLIQRAVQHKLEQLNTHPDFNNYLIFVLTKLTSEDEPT 62
W QE+ L+++ +++K S S ++ + A + LE+ PD NNYL +L T
Sbjct: 6 WVLQEQVLVELSEVIKNSLSENSQTRNAALNLLEKAKDIPDLNNYLTCILINATELSVSI 65
Query: 63 RSLSGLILKNNVRARFYEFPPGVS--EFIKQECLSAIGDPSPLIRATVGILITTIASKGD 120
RS +GL+LKNNVR E G+ ++ K + + DP LIR G +ITTI S+
Sbjct: 66 RSAAGLLLKNNVRVSSLESGSGLQSLDYTKSTVIRGLCDPEQLIRGISGNVITTIISRWG 125
Query: 121 LKSWPELLPTLNDMLDS 137
+ +WPE+LP L +ML S
Sbjct: 126 ISTWPEVLPQLMEMLSS 142
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 28/34 (82%)
Query: 144 ELLPVLLPILKETLFHHDWEIKESGILALGAIAE 177
LL ++LP LK++L DW+++E+G+LA+GAIAE
Sbjct: 410 RLLEIILPHLKQSLTSEDWKVQEAGVLAVGAIAE 443
>sp|Q8K2V6|IPO11_MOUSE Importin-11 OS=Mus musculus GN=Ipo11 PE=1 SV=1
Length = 975
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 6/132 (4%)
Query: 13 ILQLLKESQSPDNLIQRAVQHKLEQLNTHPDFNNYLIFVLTKLTSEDEPTRSLSGLILKN 72
+LQ+L ++ S D + + + +L+Q T P F + L+ + T T D R L+ L K+
Sbjct: 10 VLQVLTQATSQDTAVLKPAEEQLKQWETQPGFYSVLLNIFTNHTL-DINVRWLAVLYFKH 68
Query: 73 NVRARFYEFPP-GVSE----FIKQECLSAIGDPSPLIRATVGILITTIASKGDLKSWPEL 127
+ + P +SE ++ ++ +P I + +LI +A + WPEL
Sbjct: 69 GIDRYWRRVAPHALSEEEKSTLRAGLITNFNEPINQIATQIAVLIAKVARLDCPRQWPEL 128
Query: 128 LPTLNDMLDSQD 139
+PTL + + QD
Sbjct: 129 IPTLVESVKVQD 140
>sp|Q9UI26|IPO11_HUMAN Importin-11 OS=Homo sapiens GN=IPO11 PE=1 SV=1
Length = 975
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 6/132 (4%)
Query: 13 ILQLLKESQSPDNLIQRAVQHKLEQLNTHPDFNNYLIFVLTKLTSEDEPTRSLSGLILKN 72
+LQ+L ++ S D + + + +L+Q T P F + L+ + T T D R L+ L K+
Sbjct: 10 VLQVLTQATSQDTAVLKPAEEQLKQWETQPGFYSVLLNIFTNHTL-DINVRWLAVLYFKH 68
Query: 73 NVRARFYEFPP-GVSE----FIKQECLSAIGDPSPLIRATVGILITTIASKGDLKSWPEL 127
+ + P +SE ++ ++ +P I + +LI +A + WPEL
Sbjct: 69 GIDRYWRRVAPHALSEEEKTTLRAGLITNFNEPINQIATQIAVLIAKVARLDCPRQWPEL 128
Query: 128 LPTLNDMLDSQD 139
+PTL + + QD
Sbjct: 129 IPTLIESVKVQD 140
>sp|P38217|IMB2_YEAST Importin subunit beta-2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=KAP104 PE=1 SV=1
Length = 918
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 11/84 (13%)
Query: 2 AWQPQEEGLIQILQLLKESQSPDNLIQRAVQHKLEQLNTHPDFNNYLIFVLTKLTSED-- 59
W+P E+ ++Q+ LL+ SP+ I+ +E P+F NYL ++L + S+D
Sbjct: 4 TWKPAEDYVLQLATLLQNCMSPNPEIRNNAMEAMENFQLQPEFLNYLCYILIEGESDDVL 63
Query: 60 ---------EPTRSLSGLILKNNV 74
+ R+ +G++LKN++
Sbjct: 64 KQHYSLQDLQNNRATAGMLLKNSM 87
Score = 34.3 bits (77), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 144 ELLPVLLPILKETLFHHDWEIKESGILALGAIAE 177
+++ + P L+E L W I+E+ ILALGA+AE
Sbjct: 417 QVMDIAFPFLREHLGSDRWFIREATILALGAMAE 450
>sp|Q9ZPY7|XPO2_ARATH Exportin-2 OS=Arabidopsis thaliana GN=CAS PE=1 SV=1
Length = 972
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 66/144 (45%), Gaps = 21/144 (14%)
Query: 1 MAWQPQEEGLIQILQLLKESQSPDNLIQRAVQHKLEQLNTHPDFNNYLIFVLTKLTSE-- 58
M W E L+ + Q + SP +R + L + D NY + VL +L +E
Sbjct: 1 MEWN--RETLVFLSQCFLNTLSPIPEPRRTAERAL---SDAADQANYGLAVL-RLVAEPA 54
Query: 59 -DEPTRSLSGLILKNNVRARFYEFPPGVS----------EFIKQECLSAIGDPSPLIRAT 107
DE TR + + KN++R+R++ P G S E IK +S + SP I++
Sbjct: 55 IDEQTRHAAAVNFKNHLRSRWH--PAGDSGISPIVDSEKEQIKTLIVSLMLSASPRIQSQ 112
Query: 108 VGILITTIASKGDLKSWPELLPTL 131
+ +T I K+WP LLP L
Sbjct: 113 LSEALTVIGKHDFPKAWPALLPEL 136
>sp|O18388|IMB_DROME Importin subunit beta OS=Drosophila melanogaster GN=Fs(2)Ket PE=2
SV=2
Length = 884
Score = 37.7 bits (86), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 14/134 (10%)
Query: 11 IQILQLLKESQSPDNLIQRAVQHKLEQLNTH--PDFNNYLIFVLTKLTSEDEPTRSLSGL 68
+Q++ +L+++ SPD + ++ LEQ P+F L +L T+ R +GL
Sbjct: 7 MQLIAILEKTVSPDKNELLSAKNFLEQAAASNLPEFLKALSEILVN-TANSAVARMAAGL 65
Query: 69 ILKNNVRA-----------RFYEFPPGVSEFIKQECLSAIGDPSPLIRATVGILITTIAS 117
LKN++ + R+++FP + E IK L+A+G + +
Sbjct: 66 QLKNHLTSKDEKVSQQYQDRWHQFPSEIRELIKNNILAALGTENTRPSCAAQCVAYVAVI 125
Query: 118 KGDLKSWPELLPTL 131
+ + WP L+ TL
Sbjct: 126 ELPINRWPMLIQTL 139
>sp|Q55CX9|IPO7_DICDI Probable importin-7 homolog OS=Dictyostelium discoideum
GN=DDB_G0269860 PE=3 SV=1
Length = 1065
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 7/136 (5%)
Query: 10 LIQILQLLKESQSPDNLIQRAVQHKLEQLNTHPDFNNYLIFVLTKLTSEDEPTRSLSGLI 69
+IQ +QL + + D + +A + +L+Q+ ++ L+ +L D R +
Sbjct: 4 IIQTIQLFQHTLHHDANVIKAAEAQLQQIKVTDGYSRILLKILAS-NEVDISIRQGVSIF 62
Query: 70 LKNNV----RARFYEFP--PGVSEFIKQECLSAIGDPSPLIRATVGILITTIASKGDLKS 123
LKN + R E P +EFIK+ + + L++ + +I IA++ +
Sbjct: 63 LKNMIITKWRGAEDESPITQEDAEFIKENLIDLLVHSHHLVQNQIEAMIEIIANRDFPEK 122
Query: 124 WPELLPTLNDMLDSQD 139
W LLP +++QD
Sbjct: 123 WTSLLPKSIQYINTQD 138
>sp|Q54WR2|GCN1L_DICDI Translational activator gcn1 OS=Dictyostelium discoideum GN=gcn1l1
PE=3 SV=1
Length = 2667
Score = 33.9 bits (76), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 19/101 (18%)
Query: 92 ECLSAIGDPSPLIRATV-GILITTIASKGDL--KSWPELLP-TLNDMLDSQD--YNVCEL 145
E L+ P P +R + I I T S GDL P++LP L + D D VC
Sbjct: 1737 ELLAMTNSPRPHVREGILSIFIFTPISLGDLFLPYLPKVLPQVLKGLADDSDPVREVCMR 1796
Query: 146 -------------LPVLLPILKETLFHHDWEIKESGILALG 173
+ V++P L++ LFH +W I+ S + G
Sbjct: 1797 CGQSIVLQFAVTGIEVIVPALEKVLFHENWRIRLSCVQLFG 1837
>sp|P70168|IMB1_MOUSE Importin subunit beta-1 OS=Mus musculus GN=Kpnb1 PE=1 SV=2
Length = 876
Score = 33.5 bits (75), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 26/84 (30%)
Query: 117 SKGDLKSWPELLPTLNDMLDSQDYN-------------VC----------ELLPVLLPIL 153
+KG L+ L+P L L QD N VC +++P +LP +
Sbjct: 315 AKGALQY---LVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLSTCCEDDIVPHVLPFI 371
Query: 154 KETLFHHDWEIKESGILALGAIAE 177
KE + + DW +++ ++A G+I E
Sbjct: 372 KEHIKNPDWRYRDAAVMAFGSILE 395
>sp|P52296|IMB1_RAT Importin subunit beta-1 OS=Rattus norvegicus GN=Kpnb1 PE=1 SV=1
Length = 875
Score = 33.5 bits (75), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 26/84 (30%)
Query: 117 SKGDLKSWPELLPTLNDMLDSQDYN-------------VC----------ELLPVLLPIL 153
+KG L+ L+P L L QD N VC +++P +LP +
Sbjct: 314 AKGALQY---LVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLSTCCEDDIVPHVLPFI 370
Query: 154 KETLFHHDWEIKESGILALGAIAE 177
KE + + DW +++ ++A G+I E
Sbjct: 371 KEHIKNPDWRYRDAAVMAFGSILE 394
>sp|Q54PQ8|XPO5_DICDI Exportin-5 OS=Dictyostelium discoideum GN=xpo5 PE=3 SV=1
Length = 1135
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 12 QILQLLKESQSPDNLIQRAVQHKLEQLNTHPDFNNYLIFVLTKLTSEDEPTRSLSGLILK 71
Q L LL + +S +N + Q LE++ T + ++Y I ++T TS ++ + + I++
Sbjct: 14 QALSLLHDPKS-NNKQREESQVFLEEIKTRANAHSYAIAIIT--TSNNDILKHFALHIIE 70
Query: 72 NNVRARFYEFPPGVSEFIKQECLSAI-----GDPSPLIRATVGILITTIASKGDLKSWPE 126
V+ R+YE E IK+E L + +P + V IL+ I + WP+
Sbjct: 71 TLVKNRWYECNDQERELIKKEILELMRRITSNEPKFIKEKLVTILVDVIK-----RDWPQ 125
>sp|Q14974|IMB1_HUMAN Importin subunit beta-1 OS=Homo sapiens GN=KPNB1 PE=1 SV=2
Length = 876
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 26/84 (30%)
Query: 117 SKGDLKSWPELLPTLNDMLDSQDYN-------------VC----------ELLPVLLPIL 153
+KG L+ L+P L L QD N VC +++P +LP +
Sbjct: 315 AKGALQY---LVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFI 371
Query: 154 KETLFHHDWEIKESGILALGAIAE 177
KE + + DW +++ ++A G I E
Sbjct: 372 KEHIKNPDWRYRDAAVMAFGCILE 395
>sp|Q9VFS5|PP4R3_DROME Serine/threonine-protein phosphatase 4 regulatory subunit 3
OS=Drosophila melanogaster GN=flfl PE=1 SV=4
Length = 980
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 125 PELLPTLNDMLDSQDYNVCELLPVLLPILKETLFHHDWEIK 165
P +L T+ D ++DY +LL ++L IL + HH + IK
Sbjct: 474 PVILNTIGDRPQNEDYQTAQLLGIVLDILSFCVEHHSYHIK 514
>sp|Q9CRT8|XPOT_MOUSE Exportin-T OS=Mus musculus GN=Xpot PE=2 SV=3
Length = 963
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 54/135 (40%), Gaps = 8/135 (5%)
Query: 28 QRAVQHKLEQLNTHPDFNNYLIFVLTKLTSEDEPTRSLSGLILKNNVRARFYEFPPGVSE 87
QRA+ + EQL PD L + T D+ + +L++ V+ ++ E +
Sbjct: 19 QRALAY-FEQLKISPDAWQVCAEALAQKTYSDDHVKFFCFQVLEHQVKYKYSELSTAQQQ 77
Query: 88 FIKQECLS----AIGDPSP---LIRATVGILITTIASKGDLKSWPELLPTLNDMLDSQDY 140
I++ LS + +P P IR + + L WP+ + ++D
Sbjct: 78 LIRETLLSWLQAQMQNPQPEKTFIRNKAAQVFALLFVTEYLTKWPKFFFDILSVVDLNPR 137
Query: 141 NVCELLPVLLPILKE 155
V L +L+ I E
Sbjct: 138 GVDLYLRILMAIDSE 152
>sp|Q9D3X5|PACRL_MOUSE PACRG-like protein OS=Mus musculus GN=Pacrgl PE=1 SV=1
Length = 248
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 145 LLPVLLPILKETLFHHDWEIKESGILAL 172
LLP L+P+LK L H D E+ E G+ AL
Sbjct: 155 LLPRLIPVLKAALVHSDDEVFERGLSAL 182
>sp|Q30SH9|GATA_SULDN Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Sulfurimonas
denitrificans (strain ATCC 33889 / DSM 1251) GN=gatA
PE=3 SV=1
Length = 447
Score = 32.0 bits (71), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 118 KGDLKSWPELLPTLNDMLDSQDYNVCELLPVLLPILKETLFHHDWEIKESGILALGAIAE 177
K DLK+ E P LN +D YN+ + +P+ + K+ + DW + + G IA
Sbjct: 19 KNDLKAKIEANPELNAYIDI--YNIGDGVPIAI---KDNIQVKDWSVTSGSNILQGYIAP 73
Query: 178 VNKSIGLKLLCSS 190
N ++ K+L +
Sbjct: 74 YNATVIEKMLSAG 86
>sp|Q8N7B6|PACRL_HUMAN PACRG-like protein OS=Homo sapiens GN=PACRGL PE=1 SV=2
Length = 248
Score = 31.6 bits (70), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 145 LLPVLLPILKETLFHHDWEIKESGILAL 172
LLP L+P+LK L H D E+ E G+ AL
Sbjct: 155 LLPRLIPVLKAALVHSDDEVFERGLNAL 182
>sp|Q96P70|IPO9_HUMAN Importin-9 OS=Homo sapiens GN=IPO9 PE=1 SV=3
Length = 1041
Score = 31.6 bits (70), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 22 SPDNLIQRAVQHKLEQLNTHPDFNNYLIFVLTKLTSEDE---PTRSLSGLILKNNVR--- 75
SP ++ A + +++ L +F +L +LT + + R L+ +ILK V
Sbjct: 34 SPVQEVRAAAEEQIKVLEVTEEFGVHL----AELTVDPQGALAIRQLASVILKQYVETHW 89
Query: 76 -ARFYEF-PPGVSE----FIKQECLSAIGDPSPLIRATVGILITTIASKGDLKSWPELLP 129
A+ +F PP +E I++ + + + +R++V ++ IA ++WP+L
Sbjct: 90 CAQSEKFRPPETTERAKIVIRELLPNGLRESISKVRSSVAYAVSAIAHWDWPEAWPQLFN 149
Query: 130 TLNDMLDSQDYN 141
L +ML S D N
Sbjct: 150 LLMEMLVSGDLN 161
>sp|Q91YE6|IPO9_MOUSE Importin-9 OS=Mus musculus GN=Ipo9 PE=1 SV=3
Length = 1041
Score = 31.6 bits (70), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 22 SPDNLIQRAVQHKLEQLNTHPDFNNYLIFVLTKLTSEDE---PTRSLSGLILKNNVR--- 75
SP ++ A + +++ L +F +L +LT + + R L+ +ILK V
Sbjct: 34 SPVQEVRAAAEEQIKVLEVTEEFGVHL----AELTVDPQGALAIRQLASVILKQYVETHW 89
Query: 76 -ARFYEF-PPGVSE----FIKQECLSAIGDPSPLIRATVGILITTIASKGDLKSWPELLP 129
A+ +F PP +E I++ + + + +R++V ++ IA ++WP+L
Sbjct: 90 CAQSEKFRPPETTERAKIVIRELLPNGLRESISKVRSSVAYAVSAIAHWDWPEAWPQLFN 149
Query: 130 TLNDMLDSQDYN 141
L +ML S D N
Sbjct: 150 LLMEMLVSGDLN 161
>sp|Q3UY23|FDXA1_MOUSE Ferredoxin-fold anticodon-binding domain-containing protein 1
homolog OS=Mus musculus GN=Fdxacb1 PE=2 SV=2
Length = 622
Score = 31.6 bits (70), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 125 PELLPTLNDMLDSQDYNVCELLPVLLPILKETLF--HHDWEIKESGILAL 172
P+ LP +L + C +LP ++P ETLF D +KES + +L
Sbjct: 361 PDFLPASLHVLSGPVFRKCHILPFMMPAFHETLFILGFDNNMKESCLPSL 410
>sp|Q5R6L5|CAND1_PONAB Cullin-associated NEDD8-dissociated protein 1 OS=Pongo abelii
GN=CAND1 PE=2 SV=1
Length = 1230
Score = 30.8 bits (68), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 13/121 (10%)
Query: 53 TKLTSEDEPTRSLSGLILKNNVRARFYEFPPGVSEFIKQECLSAIGDPSPLIRATVGILI 112
T + S+ E R +S + LK + E PP S SA+ + + + G L
Sbjct: 93 TNMLSDKEQLRDISSIGLKTVIG----ELPPASSG-------SALA--ANVCKKITGRLT 139
Query: 113 TTIASKGDLKSWPELLPTLNDMLDSQDYNVCELLPVLLPILKETLFHHDWEIKESGILAL 172
+ IA + D+ E L + DML Q + P +L L L +++ I+AL
Sbjct: 140 SAIAKQEDVSVQLEALDIMADMLSRQGGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIAL 199
Query: 173 G 173
G
Sbjct: 200 G 200
>sp|P97536|CAND1_RAT Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus
GN=Cand1 PE=1 SV=1
Length = 1230
Score = 30.8 bits (68), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 13/121 (10%)
Query: 53 TKLTSEDEPTRSLSGLILKNNVRARFYEFPPGVSEFIKQECLSAIGDPSPLIRATVGILI 112
T + S+ E R +S + LK + E PP S SA+ + + + G L
Sbjct: 93 TNMLSDKEQLRDISSIGLKTVIG----ELPPASSG-------SALA--ANVCKKITGRLT 139
Query: 113 TTIASKGDLKSWPELLPTLNDMLDSQDYNVCELLPVLLPILKETLFHHDWEIKESGILAL 172
+ IA + D+ E L + DML Q + P +L L L +++ I+AL
Sbjct: 140 SAIAKQEDVSVQLEALDIMADMLSRQGGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIAL 199
Query: 173 G 173
G
Sbjct: 200 G 200
>sp|Q6ZQ38|CAND1_MOUSE Cullin-associated NEDD8-dissociated protein 1 OS=Mus musculus
GN=Cand1 PE=2 SV=2
Length = 1230
Score = 30.8 bits (68), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 13/121 (10%)
Query: 53 TKLTSEDEPTRSLSGLILKNNVRARFYEFPPGVSEFIKQECLSAIGDPSPLIRATVGILI 112
T + S+ E R +S + LK + E PP S SA+ + + + G L
Sbjct: 93 TNMLSDKEQLRDISSIGLKTVIG----ELPPASSG-------SALA--ANVCKKITGRLT 139
Query: 113 TTIASKGDLKSWPELLPTLNDMLDSQDYNVCELLPVLLPILKETLFHHDWEIKESGILAL 172
+ IA + D+ E L + DML Q + P +L L L +++ I+AL
Sbjct: 140 SAIAKQEDVSVQLEALDIMADMLSRQGGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIAL 199
Query: 173 G 173
G
Sbjct: 200 G 200
>sp|Q86VP6|CAND1_HUMAN Cullin-associated NEDD8-dissociated protein 1 OS=Homo sapiens
GN=CAND1 PE=1 SV=2
Length = 1230
Score = 30.8 bits (68), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 13/121 (10%)
Query: 53 TKLTSEDEPTRSLSGLILKNNVRARFYEFPPGVSEFIKQECLSAIGDPSPLIRATVGILI 112
T + S+ E R +S + LK + E PP S SA+ + + + G L
Sbjct: 93 TNMLSDKEQLRDISSIGLKTVIG----ELPPASSG-------SALA--ANVCKKITGRLT 139
Query: 113 TTIASKGDLKSWPELLPTLNDMLDSQDYNVCELLPVLLPILKETLFHHDWEIKESGILAL 172
+ IA + D+ E L + DML Q + P +L L L +++ I+AL
Sbjct: 140 SAIAKQEDVSVQLEALDIMADMLSRQGGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIAL 199
Query: 173 G 173
G
Sbjct: 200 G 200
>sp|A7MBJ5|CAND1_BOVIN Cullin-associated NEDD8-dissociated protein 1 OS=Bos taurus
GN=CAND1 PE=2 SV=1
Length = 1230
Score = 30.8 bits (68), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 13/121 (10%)
Query: 53 TKLTSEDEPTRSLSGLILKNNVRARFYEFPPGVSEFIKQECLSAIGDPSPLIRATVGILI 112
T + S+ E R +S + LK + E PP S SA+ + + + G L
Sbjct: 93 TNMLSDKEQLRDISSIGLKTVIG----ELPPASSG-------SALA--ANVCKKITGRLT 139
Query: 113 TTIASKGDLKSWPELLPTLNDMLDSQDYNVCELLPVLLPILKETLFHHDWEIKESGILAL 172
+ IA + D+ E L + DML Q + P +L L L +++ I+AL
Sbjct: 140 SAIAKQEDVSVQLEALDIMADMLSRQGGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIAL 199
Query: 173 G 173
G
Sbjct: 200 G 200
>sp|Q15PS2|SECB_PSEA6 Protein-export protein SecB OS=Pseudoalteromonas atlantica (strain
T6c / ATCC BAA-1087) GN=secB PE=3 SV=1
Length = 169
Score = 30.4 bits (67), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 122 KSW-PEL---LPTLNDMLDSQDYNVCELLPVLLPILKETLFHHDWEIKESGILALGAIAE 177
K W PE+ L T + +++ Y + + V + +ET F E++++GI A+G + E
Sbjct: 44 KEWKPEVQLDLDTRSALIEENVYEIVLAVTVTAMLGEETAFL--CEVQQAGIFAIGEMPE 101
Query: 178 VNKSIGLKLLCSST 191
NK+ L C +T
Sbjct: 102 QNKAHMLGSFCPNT 115
>sp|Q8IXW0|CK035_HUMAN Uncharacterized protein C11orf35 OS=Homo sapiens GN=C11orf35 PE=2
SV=2
Length = 634
Score = 30.4 bits (67), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Query: 60 EPTRSLSGLILKNNVRA---RFYEFPPGV 85
E T LSG++LK VR R Y FPPG
Sbjct: 382 ESTADLSGMVLKQLVRGFPERLYRFPPGT 410
>sp|P33307|CSE1_YEAST Importin alpha re-exporter OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=CSE1 PE=1 SV=2
Length = 960
Score = 30.0 bits (66), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 7/117 (5%)
Query: 29 RAVQHKLEQLNTHPDFNNYLIFVLTKLTSEDEPTRSLSGLILKNNVRARFYE------FP 82
+ + L QL T F L+ V+ T+ TR L KN ++ ++ + P
Sbjct: 21 KTSERNLRQLETQDGFGLTLLHVIAS-TNLPLSTRLAGALFFKNFIKRKWVDENGNHLLP 79
Query: 83 PGVSEFIKQECLSAIGDPSPLIRATVGILITTIASKGDLKSWPELLPTLNDMLDSQD 139
E IK+E + + ++ +G I++IA WP LL L L + D
Sbjct: 80 ANNVELIKKEIVPLMISLPNNLQVQIGEAISSIADSDFPDRWPTLLSDLASRLSNDD 136
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,143,056
Number of Sequences: 539616
Number of extensions: 2882783
Number of successful extensions: 7311
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 7253
Number of HSP's gapped (non-prelim): 83
length of query: 191
length of database: 191,569,459
effective HSP length: 111
effective length of query: 80
effective length of database: 131,672,083
effective search space: 10533766640
effective search space used: 10533766640
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)