Query psy9907
Match_columns 116
No_of_seqs 112 out of 778
Neff 6.0
Searched_HMMs 29240
Date Fri Aug 16 22:43:19 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9907.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9907hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1d2v_C Myeloperoxidase; heme-p 100.0 1.2E-42 3.9E-47 288.8 9.7 113 2-114 58-187 (466)
2 3q9k_A Lactoperoxidase, LPO; b 100.0 1.2E-42 4.2E-47 295.8 9.6 113 2-114 186-315 (595)
3 3nt1_A Prostaglandin-endoperox 100.0 3.1E-41 1.1E-45 286.8 8.1 111 2-114 196-320 (587)
4 1q4g_A Prostaglandin G/H synth 100.0 6.1E-41 2.1E-45 283.1 9.1 111 2-114 196-320 (553)
5 2ju0_B Phosphatidylinositol 4- 36.8 11 0.00037 22.2 0.8 18 92-110 5-22 (52)
6 3lqv_P Splicing factor 3B subu 35.6 25 0.00087 19.4 2.1 18 74-91 11-28 (39)
7 1u7k_A GAG polyprotein; capsid 24.3 37 0.0013 23.5 1.9 24 78-101 44-81 (131)
8 1u84_A Hypothetical protein; s 22.0 1.2E+02 0.0041 19.4 3.9 31 73-103 11-42 (90)
9 2hjd_A Quorum-sensing antiacti 21.7 39 0.0013 22.4 1.5 24 63-86 31-54 (102)
10 2vxg_A LD41624, GE-1, CG6181-P 21.5 1.6E+02 0.0055 20.0 4.8 36 70-107 74-109 (139)
11 1rfy_A TRAM protein;, transcri 21.5 40 0.0014 22.4 1.5 24 63-86 31-54 (102)
12 2mhr_A Myohemerythrin; oxygen 20.2 1.5E+02 0.0052 18.9 4.3 38 69-110 74-111 (118)
No 1
>1d2v_C Myeloperoxidase; heme-protein, oxidoreductase, peroxidase-bromide; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} SCOP: a.93.1.2 PDB: 1cxp_C* 1d5l_C* 1d7w_C* 1dnu_C* 1dnw_C* 1mhl_C* 1myp_C* 4dl1_C* 3zs0_C* 3f9p_C* 3zs1_C*
Probab=100.00 E-value=1.2e-42 Score=288.79 Aligned_cols=113 Identities=37% Similarity=0.513 Sum_probs=101.1
Q ss_pred ccccCccccCCHHHHhhhhcCCCcCccceecC----Ccc-cccccc------------ccceeeecCCcccccchhHHHH
Q psy9907 2 LLIPSVLYISGDARANENTHLTSMHLLLARQH----NTL-HLSFFS------------VVFIRYKRGDARANENTHLTSM 64 (116)
Q Consensus 2 ~~~~S~iYGs~~~~~~~LRs~~~~~g~l~~~~----~g~-~lp~~~------------~~~~~f~~Gd~R~ne~~~l~~~ 64 (116)
-||+|+||||+++++++||+|++++|+|+++. +|. ++|+.. .+.+||++||.|+||+|+|+++
T Consensus 58 ~lD~S~vYGs~~~~~~~LR~~~~~~G~Lk~~~~~~~~g~~~lP~~~~~~~~c~~~~~~~~~~cf~~GD~R~ne~p~l~~l 137 (466)
T 1d2v_C 58 FVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSEMPELTSM 137 (466)
T ss_dssp SSSCHHHHCSSHHHHHHHBCCSSSSCCBCCCSSCCBTTBCCCCBCCCTTCSGGGGCTTTCCCCBCCSSTTTTSSHHHHHH
T ss_pred ccccccCcCCCHHHHHHHhccCCCCCeeccCCccCCCCCcCCCCCCCCCCcccccccCCCcchhcccCcccccCHHHHHH
Confidence 48999999999999999999976569998753 454 455531 1346999999999999999999
Q ss_pred HHHHHhhhHHHHHHHHhhCCCCCchhhHHHHHHHHHHHHHHhhhcccccc
Q psy9907 65 HLLLARQHNTLARQLVTLNPDWDDETVYQESRRILGAQMQHVTSLENYLC 114 (116)
Q Consensus 65 h~lf~ReHN~ia~~L~~~~p~w~de~lfq~AR~iv~a~~q~I~~~e~lp~ 114 (116)
||+|+|||||||++|++.||+|+||+||||||+||+|+||||||+||||.
T Consensus 138 htlflReHNria~~L~~~nP~W~DE~LFqeAR~Iv~a~~Q~I~~~EyLp~ 187 (466)
T 1d2v_C 138 HTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPL 187 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHTTHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999996
No 2
>3q9k_A Lactoperoxidase, LPO; bovine lactoperoxidase, oxidoreductase, phenyl isothiocyanat iodide, PEG, edman reagent; HET: SEP HEM NAG; 1.70A {Bos taurus} PDB: 2ips_A* 2nqx_A* 2pum_A* 2qpk_A* 2qqt_A* 2qrb_A* 2pt3_A* 3eri_A* 3gc1_A* 3gcj_A* 3gck_A* 3gcl_A* 3i6n_A* 3bxi_A* 3krq_A* 3ogw_A* 3py4_A* 3nyh_A* 3ql6_A* 3r4x_A* ...
Probab=100.00 E-value=1.2e-42 Score=295.80 Aligned_cols=113 Identities=38% Similarity=0.506 Sum_probs=101.8
Q ss_pred ccccCccccCCHHHHhhhhcCCCcCccceecC----Ccc-cccccc------------ccceeeecCCcccccchhHHHH
Q psy9907 2 LLIPSVLYISGDARANENTHLTSMHLLLARQH----NTL-HLSFFS------------VVFIRYKRGDARANENTHLTSM 64 (116)
Q Consensus 2 ~~~~S~iYGs~~~~~~~LRs~~~~~g~l~~~~----~g~-~lp~~~------------~~~~~f~~Gd~R~ne~~~l~~~ 64 (116)
-||||+||||+++++++||+|+++.|+|+++. +|. ++|+.. .+.+||++||.|+||+|+|+++
T Consensus 186 ~lD~S~VYGss~~~~~~LR~~~~~~G~Lk~~~~~~~~g~~~lP~~~~~~~~c~~~~~~~~~~cf~aGD~R~ne~p~L~~l 265 (595)
T 3q9k_A 186 FLDASLVYGSEPSLASRLRNLSSPLGLMAVNQEAWDHGLAYLPFNNKKPSPCEFINTTARVPCFLAGDFRASEQILLATA 265 (595)
T ss_dssp SSSCHHHHCSSHHHHHHTBCCSSTTCCBCCCSSCCBTTBCCCCBCCCSSCHHHHTCTTTCCCCBCCSSTTTTSBHHHHHH
T ss_pred eeeeeeccCCCHHHHHHHhCCCCCCceeecccccCCCCccCCCCCCCCCCcccccCCCCCCcccccCCccccccHHHHHH
Confidence 48999999999999999999986669998753 555 566532 1356999999999999999999
Q ss_pred HHHHHhhhHHHHHHHHhhCCCCCchhhHHHHHHHHHHHHHHhhhcccccc
Q psy9907 65 HLLLARQHNTLARQLVTLNPDWDDETVYQESRRILGAQMQHVTSLENYLC 114 (116)
Q Consensus 65 h~lf~ReHN~ia~~L~~~~p~w~de~lfq~AR~iv~a~~q~I~~~e~lp~ 114 (116)
||||+|||||||++|++.||+|+||+|||||||||+|+||||||+||||.
T Consensus 266 htlflREHNria~~L~~~nP~W~dE~LfQeAR~Iv~A~~Q~Ity~E~LP~ 315 (595)
T 3q9k_A 266 HTLLLREHNRLARELKKLNPHWNGEKLYQEARKILGAFIQIITFRDYLPI 315 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHeeeeeHHHHHHH
Confidence 99999999999999999999999999999999999999999999999996
No 3
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=100.00 E-value=3.1e-41 Score=286.80 Aligned_cols=111 Identities=17% Similarity=0.126 Sum_probs=97.6
Q ss_pred ccccCccccCCHHHHhhhhcCCCcCccceec-CCcc-ccccc------------cccceeeecCCcccccchhHHHHHHH
Q psy9907 2 LLIPSVLYISGDARANENTHLTSMHLLLARQ-HNTL-HLSFF------------SVVFIRYKRGDARANENTHLTSMHLL 67 (116)
Q Consensus 2 ~~~~S~iYGs~~~~~~~LRs~~~~~g~l~~~-~~g~-~lp~~------------~~~~~~f~~Gd~R~ne~~~l~~~h~l 67 (116)
.||+|+||||+++++++||+|. +|+|+++ .+|. ++|+. .+...||++||.|+||+|+|+++|||
T Consensus 196 ~lD~S~IYGss~~~~~~LR~~~--~G~Lk~~~~~g~~~pP~~~~~~~~~~~~~~~~~~~cf~~GD~R~ne~pgL~alhtl 273 (587)
T 3nt1_A 196 GVDLNHIYGETLDRQHKLRLFK--DGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQFAVGQEVFGLVPGLMMYATI 273 (587)
T ss_dssp SCCCHHHHCSSHHHHHHHBCSS--TTCBCCEEETTEEECCBHHHHCCCCCCCTTSCGGGCBCCSSTTTTSCHHHHHHHHH
T ss_pred eeeeccCCCCCHHHHHhccCCC--CCeeeeecCCCccCCCCCCCcccccccCCCCCcccccccCCcccccChHHHHHHHH
Confidence 4899999999999999999984 6888864 3444 34432 12457999999999999999999999
Q ss_pred HHhhhHHHHHHHHhhCCCCCchhhHHHHHHHHHHHHHHhhhcccccc
Q psy9907 68 LARQHNTLARQLVTLNPDWDDETVYQESRRILGAQMQHVTSLENYLC 114 (116)
Q Consensus 68 f~ReHN~ia~~L~~~~p~w~de~lfq~AR~iv~a~~q~I~~~e~lp~ 114 (116)
|+|||||||++|++.||+|+||+||||||+||+|+||||||+||||.
T Consensus 274 flREHNriA~~L~~~nP~W~DE~LFQeAR~Iv~A~~Q~Ity~EyLP~ 320 (587)
T 3nt1_A 274 WLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGETIKIVIEDYVQH 320 (587)
T ss_dssp HHHHHHHHHHHHHC-CTTCCHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHhhheeeeHHHHHHH
Confidence 99999999999999999999999999999999999999999999995
No 4
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=100.00 E-value=6.1e-41 Score=283.15 Aligned_cols=111 Identities=18% Similarity=0.094 Sum_probs=98.5
Q ss_pred ccccCccccCCHHHHhhhhcCCCcCccceecC-Ccc-ccccc------------cccceeeecCCcccccchhHHHHHHH
Q psy9907 2 LLIPSVLYISGDARANENTHLTSMHLLLARQH-NTL-HLSFF------------SVVFIRYKRGDARANENTHLTSMHLL 67 (116)
Q Consensus 2 ~~~~S~iYGs~~~~~~~LRs~~~~~g~l~~~~-~g~-~lp~~------------~~~~~~f~~Gd~R~ne~~~l~~~h~l 67 (116)
-||+|+||||+++++++||+|. +|+|+++. +|. ++|+. .+...||++||.|+||+|+|+++|||
T Consensus 196 ~lD~S~vYGs~~~~~~~LR~~~--~G~Lk~~~~~g~~~~P~~~~~~~~~~~~~~~~~~~cf~~GD~R~ne~p~L~~lhtl 273 (553)
T 1q4g_A 196 GVDLGHIYGDNLERQYQLRLFK--DGKLKYQMLNGEVYPPSVEEAPVLMHYPRGIPPQSQMAVGQEVFGLLPGLMLYATI 273 (553)
T ss_dssp SSSCHHHHCSSHHHHHHHBCSS--TTCBCCEEETTEEECCBTTTSCCCCCCCTTCCGGGSBCCSSTTGGGCHHHHHHHHH
T ss_pred cccccccCCCCHHHHHhhhcCC--CCEecccCCCCccCCCccCCCCCcccCCCCCCchhccccCccccCcCHHHHHHHHH
Confidence 3899999999999999999984 68888653 454 33421 12467999999999999999999999
Q ss_pred HHhhhHHHHHHHHhhCCCCCchhhHHHHHHHHHHHHHHhhhcccccc
Q psy9907 68 LARQHNTLARQLVTLNPDWDDETVYQESRRILGAQMQHVTSLENYLC 114 (116)
Q Consensus 68 f~ReHN~ia~~L~~~~p~w~de~lfq~AR~iv~a~~q~I~~~e~lp~ 114 (116)
|+|||||||++|++.||+|+||+||||||+||+|+||||||+||||.
T Consensus 274 flReHNria~~L~~~nP~W~DE~LFQeAR~Iv~a~~Q~I~~~EyLp~ 320 (553)
T 1q4g_A 274 WLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKIVIEEYVQQ 320 (553)
T ss_dssp HHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999985
No 5
>2ju0_B Phosphatidylinositol 4-kinase PIK1; EF-hand, calcium, ptdins 4-kinase, frequenin, yeast, lipoprotein, membrane, myristate, nucleus; NMR {Saccharomyces cerevisiae}
Probab=36.83 E-value=11 Score=22.21 Aligned_cols=18 Identities=28% Similarity=0.366 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHHhhhcc
Q psy9907 92 YQESRRILGAQMQHVTSLE 110 (116)
Q Consensus 92 fq~AR~iv~a~~q~I~~~e 110 (116)
||.+|+++ -.+|+|.|+-
T Consensus 5 Fqv~Rr~~-NklQ~ilFn~ 22 (52)
T 2ju0_B 5 FQVARRVL-NNLQTNLFNT 22 (52)
T ss_dssp THHHHHHH-HHHTCCSSCS
T ss_pred hHHHHHHH-HHHHHHHhCC
Confidence 89999874 5789998863
No 6
>3lqv_P Splicing factor 3B subunit 1; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} PDB: 2f9d_P 2f9j_P
Probab=35.62 E-value=25 Score=19.43 Aligned_cols=18 Identities=22% Similarity=0.281 Sum_probs=14.9
Q ss_pred HHHHHHHhhCCCCCchhh
Q psy9907 74 TLARQLVTLNPDWDDETV 91 (116)
Q Consensus 74 ~ia~~L~~~~p~w~de~l 91 (116)
++...+-..|--|+||+|
T Consensus 11 ~~~~ei~~RNrpltDEeL 28 (39)
T 3lqv_P 11 RWEREIDERNRPLSDEEL 28 (39)
T ss_dssp HHHHHHHHTTCCCCHHHH
T ss_pred HhhccchhhcCCCCHHHH
Confidence 556678888999999987
No 7
>1u7k_A GAG polyprotein; capsid, viral protein; 1.85A {Endogenous} SCOP: a.73.1.1 PDB: 2y4z_A 3bp9_A
Probab=24.27 E-value=37 Score=23.48 Aligned_cols=24 Identities=38% Similarity=0.707 Sum_probs=17.7
Q ss_pred HHHhhCCCCCc--------------hhhHHHHHHHHHH
Q psy9907 78 QLVTLNPDWDD--------------ETVYQESRRILGA 101 (116)
Q Consensus 78 ~L~~~~p~w~d--------------e~lfq~AR~iv~a 101 (116)
.+..-+|.|+| ++|..+||+.|.+
T Consensus 44 i~~th~pTW~D~qqLL~tLlT~EEr~ril~eArk~v~~ 81 (131)
T 1u7k_A 44 VLTTHQPTWDDCQQLLGTLLTGEEKQRVLLEARKAVRG 81 (131)
T ss_dssp HHHHTCCCHHHHHHHHHHHSCHHHHHHHHHHHHHTCBC
T ss_pred HHHhcCCCHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh
Confidence 44555788877 7899999987644
No 8
>1u84_A Hypothetical protein; structural genomics, protein structure initiative, MCSG, PSI center for structural genomics; 1.60A {Geobacillus stearothermophilus} SCOP: a.230.1.1 PDB: 3r2x_C*
Probab=21.95 E-value=1.2e+02 Score=19.43 Aligned_cols=31 Identities=16% Similarity=0.188 Sum_probs=25.0
Q ss_pred HHHHHHHHhhCC-CCCchhhHHHHHHHHHHHH
Q psy9907 73 NTLARQLVTLNP-DWDDETVYQESRRILGAQM 103 (116)
Q Consensus 73 N~ia~~L~~~~p-~w~de~lfq~AR~iv~a~~ 103 (116)
..+.+.|...+| +.+++.--+|+++|+.|..
T Consensus 11 ~~~~~iI~~WDPf~~g~D~Y~~Ei~~Iv~av~ 42 (90)
T 1u84_A 11 RLLLEWIGAWDPFGLGKDAYDVEAASVLQAVY 42 (90)
T ss_dssp HHHHHHHHHHCTTSSCGGGGHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCCcCCCccchHHHHHHHHHHH
Confidence 467788888999 4677888899999998764
No 9
>2hjd_A Quorum-sensing antiactivator; helix coiled coil, signaling protein; 2.10A {Agrobacterium tumefaciens}
Probab=21.68 E-value=39 Score=22.41 Aligned_cols=24 Identities=17% Similarity=0.070 Sum_probs=14.4
Q ss_pred HHHHHHHhhhHHHHHHHHhhCCCC
Q psy9907 63 SMHLLLARQHNTLARQLVTLNPDW 86 (116)
Q Consensus 63 ~~h~lf~ReHN~ia~~L~~~~p~w 86 (116)
.+-+==.|+|.++.+.--+.+..|
T Consensus 31 ~LtV~AIr~HRrLl~~ae~~fq~w 54 (102)
T 2hjd_A 31 TLTANAIRLHRQLLEKADQLFQVL 54 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334699999988644443334
No 10
>2vxg_A LD41624, GE-1, CG6181-PA, isoform A; decapping, EDC4, hedls, mRNA decay, P-BODY, gene regulation; 1.9A {Drosophila melanogaster}
Probab=21.55 E-value=1.6e+02 Score=20.03 Aligned_cols=36 Identities=14% Similarity=0.250 Sum_probs=30.3
Q ss_pred hhhHHHHHHHHhhCCCCCchhhHHHHHHHHHHHHHHhh
Q psy9907 70 RQHNTLARQLVTLNPDWDDETVYQESRRILGAQMQHVT 107 (116)
Q Consensus 70 ReHN~ia~~L~~~~p~w~de~lfq~AR~iv~a~~q~I~ 107 (116)
+.++++-+.+.+.+|. |+.+-+.+++|..-.+|++.
T Consensus 74 ~Kl~WLe~vl~aid~~--dp~i~~~~p~Il~~l~~~L~ 109 (139)
T 2vxg_A 74 LKQRYLNEALLAINMA--DPITREHAPKVLTELYRNCQ 109 (139)
T ss_dssp HHHHHHHHHHHHCCTT--SHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCC--CchHHHHHHHHHHHHHHHHH
Confidence 4456777788888885 89999999999999999875
No 11
>1rfy_A TRAM protein;, transcriptional repressor TRAM; inter- and intra-molcular two-helix coiled coil, homodimer; 1.60A {Agrobacterium tumefaciens} SCOP: a.2.13.1 PDB: 1us6_A 1upg_A
Probab=21.49 E-value=40 Score=22.38 Aligned_cols=24 Identities=17% Similarity=0.180 Sum_probs=14.5
Q ss_pred HHHHHHHhhhHHHHHHHHhhCCCC
Q psy9907 63 SMHLLLARQHNTLARQLVTLNPDW 86 (116)
Q Consensus 63 ~~h~lf~ReHN~ia~~L~~~~p~w 86 (116)
.+-+==.|+|.++.+.--+.+..|
T Consensus 31 ~LtV~AIr~HRrLl~~ae~~fq~w 54 (102)
T 1rfy_A 31 TITIDAIRTHRRLVEKADELFQAL 54 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344699999988644444444
No 12
>2mhr_A Myohemerythrin; oxygen binding; 1.30A {Themiste zostericola} SCOP: a.24.4.1 PDB: 1a7d_A 1a7e_A
Probab=20.19 E-value=1.5e+02 Score=18.92 Aligned_cols=38 Identities=11% Similarity=0.162 Sum_probs=30.0
Q ss_pred HhhhHHHHHHHHhhCCCCCchhhHHHHHHHHHHHHHHhhhcc
Q psy9907 69 ARQHNTLARQLVTLNPDWDDETVYQESRRILGAQMQHVTSLE 110 (116)
Q Consensus 69 ~ReHN~ia~~L~~~~p~w~de~lfq~AR~iv~a~~q~I~~~e 110 (116)
-++|..+.+.+....-...++. .+.+..+...||...|
T Consensus 74 ~~~H~~f~~~v~~l~~~~~~~~----~~~l~~Wl~~HI~~~D 111 (118)
T 2mhr_A 74 KKMHKDFLEKIGGLSAPVDAKN----VDYCKEWLVNHIKGTD 111 (118)
T ss_dssp HHHHHHHHHHHHTCCSSCCHHH----HHHHHHHHHHHHHHTG
T ss_pred HHHHHHHHHHHHHHHHHHHhch----hHHHHHHHHHHhHHHH
Confidence 5889999989988887776664 6667788889988766
Done!