RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy9907
         (116 letters)



>d1q4ga1 a.93.1.2 (A:74-584) Prostaglandin H2 synthase {Sheep (Ovis
           aries) [TaxId: 9940]}
          Length = 511

 Score = 77.7 bits (191), Expect = 1e-18
 Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 1/67 (1%)

Query: 47  RYKRGDARANENTHLTSMHLLLARQHNTLARQLVTLNPDWDDETVYQESRRILGAQMQHV 106
           +   G         L     +  R+HN +   L   +P W DE ++Q +R IL  +   +
Sbjct: 211 QMAVGQEVFGLLPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKI 270

Query: 107 TSLENYL 113
             +E Y+
Sbjct: 271 V-IEEYV 276


>g1cxp.1 a.93.1.2 (A:,C:) Myeloperoxidase {Human (Homo sapiens)
           [TaxId: 9606]}
          Length = 570

 Score = 77.1 bits (189), Expect = 2e-18
 Identities = 32/60 (53%), Positives = 44/60 (73%)

Query: 48  YKRGDARANENTHLTSMHLLLARQHNTLARQLVTLNPDWDDETVYQESRRILGAQMQHVT 107
           +  GD R++E   LTSMH LL R+HN LA +L +LNP WD E +YQE+R+I+GA +Q +T
Sbjct: 225 FLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIIT 284


>d1cvua1 a.93.1.2 (A:74-583) Prostaglandin H2 synthase {Mouse (Mus
           musculus) [TaxId: 10090]}
          Length = 511

 Score = 75.4 bits (185), Expect = 6e-18
 Identities = 18/120 (15%), Positives = 45/120 (37%), Gaps = 13/120 (10%)

Query: 6   SVLYISGDARANE---------NTHLTSMHLLLARQHNT-LHLSFFSVV--FIRYKRGDA 53
           + +Y     R ++            +    +      +T + + +   +   +++  G  
Sbjct: 159 NHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQFAVGQE 218

Query: 54  RANENTHLTSMHLLLARQHNTLARQLVTLNPDWDDETVYQESRRILGAQMQHVTSLENYL 113
                  L     +  R+H  +   L   +P+W DE ++Q S+ IL  +   +  +E+Y+
Sbjct: 219 VFGLVPGLMMYATIWLREHQRVCDILKQEHPEWGDEQLFQTSKLILIGETIKIV-IEDYV 277


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.323    0.133    0.388 

Gapped
Lambda     K      H
   0.267   0.0517    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 390,898
Number of extensions: 14209
Number of successful extensions: 38
Number of sequences better than 10.0: 1
Number of HSP's gapped: 38
Number of HSP's successfully gapped: 11
Length of query: 116
Length of database: 2,407,596
Length adjustment: 73
Effective length of query: 43
Effective length of database: 1,405,306
Effective search space: 60428158
Effective search space used: 60428158
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 47 (22.4 bits)