Query psy9912
Match_columns 366
No_of_seqs 308 out of 2164
Neff 8.1
Searched_HMMs 29240
Date Fri Aug 16 22:50:24 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9912.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9912hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2axn_A 6-phosphofructo-2-kinas 100.0 1.9E-70 6.4E-75 555.3 37.6 349 3-352 98-448 (520)
2 1bif_A 6-phosphofructo-2-kinas 100.0 2.4E-69 8.2E-74 542.4 38.6 356 2-358 101-457 (469)
3 2a6p_A Possible phosphoglycera 100.0 1.2E-38 4E-43 286.4 20.3 189 143-337 3-197 (208)
4 1h2e_A Phosphatase, YHFR; hydr 100.0 4.6E-38 1.6E-42 282.2 19.9 185 151-337 2-196 (207)
5 1fzt_A Phosphoglycerate mutase 100.0 3E-38 1E-42 284.1 17.8 185 144-329 1-200 (211)
6 3kkk_A Phosphoglycerate mutase 100.0 3.8E-37 1.3E-41 285.1 17.8 193 147-339 8-239 (258)
7 3gp3_A 2,3-bisphosphoglycerate 100.0 1.4E-36 4.7E-41 281.2 19.7 192 148-339 7-237 (257)
8 4emb_A 2,3-bisphosphoglycerate 100.0 1.8E-36 6.3E-41 283.2 18.3 192 148-339 25-255 (274)
9 3hjg_A Putative alpha-ribazole 100.0 2.1E-36 7.3E-41 272.6 18.0 183 148-336 3-196 (213)
10 1e58_A Phosphoglycerate mutase 100.0 2.8E-36 9.5E-41 277.9 17.3 189 150-338 2-229 (249)
11 3d8h_A Glycolytic phosphoglyce 100.0 6.3E-36 2.2E-40 278.6 19.7 190 150-339 20-248 (267)
12 2hhj_A Bisphosphoglycerate mut 100.0 5.4E-36 1.8E-40 279.0 18.0 180 149-328 2-224 (267)
13 1yfk_A Phosphoglycerate mutase 100.0 7.2E-36 2.4E-40 277.4 16.6 182 149-330 2-224 (262)
14 1qhf_A Protein (phosphoglycera 100.0 8.5E-36 2.9E-40 273.2 15.9 181 151-332 1-220 (240)
15 1rii_A 2,3-bisphosphoglycerate 100.0 7.7E-36 2.6E-40 277.6 14.9 179 150-328 4-219 (265)
16 4eo9_A 2,3-bisphosphoglycerate 100.0 1.4E-35 4.6E-40 276.5 15.5 185 149-333 26-247 (268)
17 1v37_A Phosphoglycerate mutase 100.0 7.1E-36 2.4E-40 261.6 12.7 164 151-332 1-166 (177)
18 2qni_A AGR_C_517P, uncharacter 100.0 1.6E-34 5.3E-39 261.5 17.1 176 145-328 16-199 (219)
19 3r7a_A Phosphoglycerate mutase 100.0 2.5E-34 8.6E-39 262.8 15.5 180 148-335 11-221 (237)
20 3f3k_A Uncharacterized protein 100.0 8.3E-34 2.8E-38 263.9 13.0 187 148-334 3-250 (265)
21 3e9c_A ZGC:56074; histidine ph 100.0 2.5E-33 8.7E-38 260.6 16.1 175 148-328 1-227 (265)
22 3dcy_A Regulator protein; OMIM 100.0 1.6E-33 5.6E-38 263.3 14.1 176 146-327 4-248 (275)
23 3d4i_A STS-2 protein; PGM, 2H- 100.0 1.2E-32 4.2E-37 256.9 16.0 185 146-333 5-250 (273)
24 3c7t_A Ecdysteroid-phosphate p 100.0 7.8E-32 2.7E-36 250.2 19.3 181 149-333 3-240 (263)
25 3mbk_A Ubiquitin-associated an 100.0 2.4E-31 8.3E-36 247.0 15.5 171 171-343 54-249 (264)
26 3mxo_A Serine/threonine-protei 100.0 4.3E-29 1.5E-33 222.8 18.2 169 147-337 7-189 (202)
27 3eoz_A Putative phosphoglycera 100.0 4.8E-30 1.6E-34 231.2 9.4 167 148-335 19-199 (214)
28 1ujc_A Phosphohistidine phosph 99.9 1.7E-25 5.7E-30 192.5 18.6 147 151-337 1-150 (161)
29 2rfl_A Putative phosphohistidi 99.9 5.4E-25 1.8E-29 191.6 11.0 136 150-329 8-153 (173)
30 3f2i_A ALR0221 protein; alpha- 99.9 3.1E-21 1.1E-25 167.6 13.7 143 151-328 1-144 (172)
31 3fjy_A Probable MUTT1 protein; 99.8 2.3E-20 7.7E-25 181.0 17.5 159 143-336 175-348 (364)
32 4hbz_A Putative phosphohistidi 99.8 2.8E-18 9.5E-23 150.7 13.8 136 149-328 18-166 (186)
33 3u3g_D Ribonuclease H, RNAse H 98.2 3.4E-07 1.2E-11 75.4 1.5 94 27-122 40-137 (140)
34 3hst_B Protein RV2228C/MT2287; 98.1 2.2E-07 7.5E-12 76.8 -1.1 91 28-122 42-133 (141)
35 2ehg_A Ribonuclease HI; RNAse 98.0 1.2E-06 4.1E-11 73.3 1.0 89 29-122 45-134 (149)
36 2qkb_A Ribonuclease H1, HS-RNA 96.1 0.0034 1.2E-07 52.4 3.4 89 29-122 47-151 (154)
37 2kq2_A Ribonuclease H-related 96.0 0.00034 1.2E-08 58.2 -3.1 85 30-123 48-138 (147)
38 1nd6_A Prostatic acid phosphat 95.9 0.0085 2.9E-07 56.6 5.9 64 152-215 6-87 (354)
39 3h08_A RNH (ribonuclease H); R 95.9 0.0075 2.6E-07 49.7 4.6 90 28-121 40-143 (146)
40 1zbf_A Ribonuclease H-related 95.6 0.019 6.5E-07 47.3 6.0 45 29-76 48-93 (142)
41 1dkq_A Phytase; histidine acid 95.4 0.025 8.4E-07 54.9 6.8 64 152-215 11-100 (410)
42 3it3_A Acid phosphatase; HAP, 95.3 0.03 1E-06 52.9 7.1 65 151-215 10-92 (342)
43 1ril_A Ribonuclease H; hydrola 95.3 0.017 5.9E-07 48.8 4.8 92 28-123 44-149 (166)
44 2e4l_A Ribonuclease HI, RNAse 95.1 0.013 4.4E-07 49.1 3.3 91 28-122 42-145 (158)
45 1jl1_A Ribonuclease HI; RNAse 94.7 0.015 5.1E-07 48.5 2.7 92 28-123 40-144 (155)
46 2wnh_A 3-phytase; histidine ac 94.4 0.034 1.2E-06 54.1 4.9 64 152-215 19-108 (418)
47 3ntl_A Acid glucose-1-phosphat 94.3 0.072 2.5E-06 51.4 6.9 65 151-215 9-100 (398)
48 1qwo_A Phytase; alpha barrel, 93.9 0.056 1.9E-06 52.8 5.3 45 171-215 100-149 (442)
49 4htu_A Ribonuclease H, RNAse H 93.8 0.14 4.7E-06 41.6 6.5 40 29-71 42-82 (134)
50 3k4q_A 3-phytase A; PHYA, 3-ph 92.4 0.14 4.7E-06 50.2 5.5 45 171-215 101-150 (444)
51 1ly1_A Polynucleotide kinase; 92.4 0.71 2.4E-05 38.1 9.4 56 15-71 68-125 (181)
52 3zvl_A Bifunctional polynucleo 92.2 0.38 1.3E-05 46.5 8.3 61 12-74 299-359 (416)
53 3qio_A GAG-POL polyprotein; RN 92.0 0.094 3.2E-06 43.4 3.2 88 26-121 43-146 (150)
54 1mu2_A HIV-2 RT; HIV-2 reverse 91.1 0.09 3.1E-06 53.0 2.6 82 27-119 468-554 (555)
55 1ltq_A Polynucleotide kinase; 89.9 2.1 7.1E-05 38.8 10.6 59 13-72 66-126 (301)
56 2lsn_A Reverse transcriptase; 89.6 0.39 1.3E-05 40.3 4.9 87 30-119 50-160 (165)
57 2gfi_A Phytase; hydrolase; HET 89.0 0.47 1.6E-05 46.5 5.8 43 173-215 119-175 (458)
58 2zd1_A Reverse transcriptase/r 88.8 0.053 1.8E-06 54.7 -1.3 82 26-118 470-556 (557)
59 3p1g_A Xenotropic murine leuke 85.2 0.54 1.8E-05 39.4 3.2 83 29-121 60-155 (165)
60 1qfx_A Protein (PH 2.5 acid ph 75.5 1.8 6E-05 42.4 3.5 43 173-215 112-164 (460)
61 3a4m_A L-seryl-tRNA(SEC) kinas 61.8 33 0.0011 30.1 8.7 53 16-71 67-119 (260)
62 2rhm_A Putative kinase; P-loop 61.5 52 0.0018 26.7 9.5 54 17-72 72-125 (193)
63 2cdn_A Adenylate kinase; phosp 60.2 63 0.0022 26.6 10.0 72 25-107 100-172 (201)
64 2p5t_B PEZT; postsegregational 59.9 33 0.0011 29.9 8.4 59 13-72 99-157 (253)
65 2vli_A Antibiotic resistance p 57.7 27 0.00092 28.3 7.0 53 17-70 71-123 (183)
66 1gvn_B Zeta; postsegregational 49.2 1.4E+02 0.0047 26.5 10.9 45 19-65 107-151 (287)
67 3c0t_B Mediator of RNA polymer 40.3 13 0.00045 21.1 1.4 19 5-23 3-21 (33)
68 2yvu_A Probable adenylyl-sulfa 40.1 1E+02 0.0035 24.9 7.9 52 17-69 79-130 (186)
69 3dl0_A Adenylate kinase; phosp 32.7 1E+02 0.0036 25.5 6.9 80 23-107 78-183 (216)
70 3sr0_A Adenylate kinase; phosp 27.7 1.5E+02 0.005 25.0 6.9 88 15-107 68-173 (206)
71 3fb4_A Adenylate kinase; psych 27.5 1.3E+02 0.0044 24.9 6.5 84 23-107 78-183 (216)
72 3lfh_A Manxa, phosphotransfera 26.1 61 0.0021 25.9 3.9 42 261-302 37-82 (144)
73 1tev_A UMP-CMP kinase; ploop, 25.5 2.5E+02 0.0086 22.2 11.9 76 23-106 86-162 (196)
74 2xvy_A Chelatase, putative; me 24.6 62 0.0021 28.5 4.0 15 149-163 8-22 (269)
75 3hs2_A PHD protein, prevent HO 22.6 69 0.0024 21.1 3.0 29 266-294 5-33 (58)
No 1
>2axn_A 6-phosphofructo-2-kinase/fructose-2,6- biphosphatase 3 (6PF-2-K/FRU- 2,6-P2ASE brain/placenta-type...; bifunctional enzyme, EDTA complex; HET: F6P EDT ADP; 2.10A {Homo sapiens} PDB: 2dwo_A* 2dwp_A* 2i1v_B* 3qpu_A* 3qpv_A* 3qpw_A*
Probab=100.00 E-value=1.9e-70 Score=555.28 Aligned_cols=349 Identities=58% Similarity=1.039 Sum_probs=332.5
Q ss_pred HHHHHHHHHHHHHHHHhhc-CCeEEEEeCCCchHHHHHHHHHHHHhhcCCeEEEEEEEeCCHHHHHHhHHHHhcCCCCCC
Q psy9912 3 IRTQCAIDALTDVIAWLET-GGEVAVFDATNSTIDRRKMIHEMVVDKMGYKLFFVESVCDDPSIIEQNIMEVKVNSPDYQ 81 (366)
Q Consensus 3 ~r~~~~~~~~~d~~~~l~~-~g~vai~daTN~t~e~r~~i~~~~~~~~~~~~~~iE~~~d~~~vi~~ni~~~k~~~pdy~ 81 (366)
.|++++..+++++..||.+ .|+++|+||||.++++|..+.+. +++.|++++||++.|+|++++++|+...+.++|+|+
T Consensus 98 ~re~~~~~~l~~~~~~L~~~~g~~VIvDat~~~~~~R~~~~~~-a~~~g~~v~~l~~~~~d~e~i~~ri~~r~~~rPdl~ 176 (520)
T 2axn_A 98 VRKQCALAALRDVKSYLAKEGGQIAVFDATNTTRERRHMILHF-AKENDFKAFFIESVCDDPTVVASNIMEVKISSPDYK 176 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCCCEEEEESCCCSHHHHHHHHHH-HHHHTCEEEEEEEECCCHHHHHHHHHHHTTTSGGGT
T ss_pred HHHHHHHHHHHHHHHHHHhcCCceEEecCCCCCHHHHHHHHHH-HHHcCCeEEEEEEeCChHHHHHHHHHhhhhcCCccc
Confidence 5788999999999999964 48999999999999999999998 888899999999999999999999988888999999
Q ss_pred CCCHHHHHHHHHHHHHhHHhhceeCchhh-HHhhhhHhhhccCCceEeccccchhhhhHHHHhhcCCCCCeeEEEeeccc
Q psy9912 82 DMNREAALQDFLQRIMHYEERYEALNEES-EAALSFMRIYNTGEKVLVHKHEGHIQARIVYYLMNIHIVPRTIYLTRHGE 160 (366)
Q Consensus 82 ~~~~e~a~~~~~~r~~~~~~~y~p~~~~~-~~~~~~ik~id~g~~~~~~~~~g~l~~~i~~~l~n~~~~~~~I~LvRHGe 160 (366)
+.+.++++++|.+|++.|+..|+|+++++ ++|++|||+||+|+++.+|+++||++++|+|||||+|..+++||||||||
T Consensus 177 ~~d~e~~~~~~~~Ri~~y~~~Yepi~~ee~~~dl~yik~id~g~~~~~~~~~g~l~~~~~~~l~n~~~~~~~i~LvRHGe 256 (520)
T 2axn_A 177 DCNSAEAMDDFMKRISCYEASYQPLDPDKCDRDLSLIKVIDVGRRFLVNRVQDHIQSRIVYYLMNIHVQPRTIYLCRHGE 256 (520)
T ss_dssp TSCHHHHHHHHHHHHHHHHTTCCCCCTTTTTTTSEEEEEETTTTEEEEECCCSHHHHHHHHHHTTCCCSCCCEEEEECCC
T ss_pred cCCHHHHHHHHHHHHHhhhhhhcccChhhcccCcceEEEEcCccccccCCCCCCcchhhhhhhcccCCCceeEEEeecce
Confidence 99999999999999999999999998543 57899999999999999999999999999999999999999999999999
Q ss_pred cccccCCcccCCCCCCHhhHHHHHHHHHHHhcCCCCCcEEEecchHHHHHHHHhcCCCceeeccccccccCccCCCCHHH
Q psy9912 161 SEHNLQGIIGGDSSLSERGQLYSQALGKFIAQQDIPGLRIWTSWLKRTIQTVATCPAPQERWKALNEIDAGICEEMTYEQ 240 (366)
Q Consensus 161 s~~n~~~~~~gD~~LT~~G~~qA~~l~~~l~~~~~~~~~i~tSpl~Ra~qTA~~i~~~~~~~~~L~E~~~G~~eg~~~~e 240 (366)
+++|..++++||+|||+.|++||+.++++|+..++.++.|||||+.||+|||++++.++..++.|+|+++|.|+|++++|
T Consensus 257 t~~n~~~~~~gD~pLt~~G~~qA~~l~~~L~~~~~~~~~v~sSpl~Ra~qTA~~i~~~~~~~~~L~E~~~G~~eG~~~~e 336 (520)
T 2axn_A 257 NEHNLQGRIGGDSGLSSRGKKFASALSKFVEEQNLKDLRVWTSQLKSTIQTAEALRLPYEQWKALNEIDAGVCEELTYEE 336 (520)
T ss_dssp BHHHHHTBCSSCCCBCHHHHHHHHHHHHHHHHHCCSCCEEEECSSHHHHHHHHTTTSCEEECGGGSCCCCGGGTTCBHHH
T ss_pred eccccCCccCCCcccCHHHHHHHHHHHHHHHhcCCCCCeEEeCCcHHHHHHHHHhCCCcEEccccccccCCcccCCcHHH
Confidence 99999999999999999999999999999999888778999999999999999998899999999999999999999999
Q ss_pred HHhhCchHHHhhhhCCCccCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEEechHHHHHHHHHHhcCCCCCCCCcccCCce
Q psy9912 241 IAEKYPDDFSARDCAKFTYRYPRGESYEDLVARLEPVIMELERQGNVLVVSHQAVLRCLLAYFLDKSADELPYLQVPLHT 320 (366)
Q Consensus 241 i~~~~p~~~~~~~~~~~~~~~p~gES~~d~~~R~~~~i~~l~~~~~vlIVsH~~~ir~l~~~~~~~~~~~~~~l~~~~~~ 320 (366)
+.+.||+.+..|..+++.+++|+|||+.++..|+.+++.++.+.++|||||||++|+++++++++.+.+.++.+.+|+++
T Consensus 337 i~~~~p~~~~~~~~d~~~~~~p~gEs~~~~~~Rv~~~l~~l~~~~~vlvVsH~~~ir~ll~~ll~~~~~~~~~l~~p~~s 416 (520)
T 2axn_A 337 IRDTYPEEYALREQDKYYYRYPTGESYQDLVQRLEPVIMELERQENVLVICHQAVLRCLLAYFLDKSAEEMPYLKCPLHT 416 (520)
T ss_dssp HHHHCHHHHHHHHHCTTTCCCTTSCCHHHHHHHHHHHHHHHHHCSSEEEEECHHHHHHHHHHHTTCCTTTGGGCCCCTTE
T ss_pred HHHHCHHHHHHHhcCcccCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEChHHHHHHHHHHhCCCHHHhhccCCCCCe
Confidence 99999999999999999999999999999999999999999887899999999999999999999999999999999999
Q ss_pred EEEEEEecCccEEEEEeeCCCCCCCCCCCCCC
Q psy9912 321 IIKLTPVAYGCKMEMIKLPIDAVDTHRPKPKV 352 (366)
Q Consensus 321 v~~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 352 (366)
+++|.+.++|+.++.+.+|.+.+++|+++|..
T Consensus 417 v~~l~~~~~g~~~~~~~ln~~~~~~~~~~~~~ 448 (520)
T 2axn_A 417 VLKLTPVAYGCRVESIYLNVESVCTHRERSED 448 (520)
T ss_dssp EEEEEEETTEEEEEEEECSCCCCCCCCCCC--
T ss_pred EEEEEEcCCCceEEEEECCCccccccCCCccc
Confidence 99999999999999999999999999999973
No 2
>1bif_A 6-phosphofructo-2-kinase/ fructose-2,6-bisphospha; transferase (phospho), phosphatase, hydrolase (phosp glycolysis, bifunctional enzyme; HET: AGS; 2.00A {Rattus norvegicus} SCOP: c.37.1.7 c.60.1.4 PDB: 3bif_A* 2bif_A* 1k6m_A* 1c80_A* 1c7z_A* 1c81_A* 1tip_A* 1fbt_A
Probab=100.00 E-value=2.4e-69 Score=542.42 Aligned_cols=356 Identities=58% Similarity=0.981 Sum_probs=338.7
Q ss_pred HHHHHHHHHHHHHHHHHhhcC-CeEEEEeCCCchHHHHHHHHHHHHhhcCCeEEEEEEEeCCHHHHHHhHHHHhcCCCCC
Q psy9912 2 RIRTQCAIDALTDVIAWLETG-GEVAVFDATNSTIDRRKMIHEMVVDKMGYKLFFVESVCDDPSIIEQNIMEVKVNSPDY 80 (366)
Q Consensus 2 ~~r~~~~~~~~~d~~~~l~~~-g~vai~daTN~t~e~r~~i~~~~~~~~~~~~~~iE~~~d~~~vi~~ni~~~k~~~pdy 80 (366)
+.|+.++..++.++..++... |.++|+|+||.+.++|..+.+. +++.++.++|+|+.|+++.++.+|+.+.+.+.|||
T Consensus 101 r~re~~~~~~l~~~~~~l~~~~G~~vV~D~tn~~~~~R~~~~~~-~~~~~~~vv~l~~~~~~~~~i~~r~~~~~~~rp~~ 179 (469)
T 1bif_A 101 KIRKQCALAALNDVRKFLSEEGGHVAVFDATNTTRERRAMIFNF-GEQNGYKTFFVESICVDPEVIAANIVQVKLGSPDY 179 (469)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCSEEEEESCCCSHHHHHHHHHH-HHHHTCEEEEEEECCCCHHHHHHHHHHHTTTSTTT
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCEEEEeCCCCCHHHHHHHHHH-HHhcCCcEEEEEEECCCHHHHHHHHHHhhhcCCcc
Confidence 358888899999999999654 8999999999999999999998 88888899999999999999999998888888999
Q ss_pred CCCCHHHHHHHHHHHHHhHHhhceeCchhhHHhhhhHhhhccCCceEeccccchhhhhHHHHhhcCCCCCeeEEEeeccc
Q psy9912 81 QDMNREAALQDFLQRIMHYEERYEALNEESEAALSFMRIYNTGEKVLVHKHEGHIQARIVYYLMNIHIVPRTIYLTRHGE 160 (366)
Q Consensus 81 ~~~~~e~a~~~~~~r~~~~~~~y~p~~~~~~~~~~~ik~id~g~~~~~~~~~g~l~~~i~~~l~n~~~~~~~I~LvRHGe 160 (366)
++.+.+++.++|.+|+..|+..|+|++++.+++++|||+||.|+++.+|+++||++++|+|||||+|..+++||||||||
T Consensus 180 ~~~~~e~~~~~~~~R~~~y~~~ye~l~~~~~~~~~~ik~~d~~~~~~~~~~~g~~~~~~~~~l~n~~~~~~~i~LvRHGe 259 (469)
T 1bif_A 180 VNRDSDEATEDFMRRIECYENSYESLDEEQDRDLSYIKIMDVGQSYVVNRVADHIQSRIVYYLMNIHVTPRSIYLCRHGE 259 (469)
T ss_dssp TTSCHHHHHHHHHHHHHHHHTTCCCCCTTTTTTSCEEEEETTTTEEEEECCCSHHHHHHHHHHTTCCCCCCCEEEEECSC
T ss_pred cCCCHHHHHHHHHHHHHHhccEeEECCccccCCcceEEEEcCccceeccCccccchhhHHHHHhccCCCCceEEEeccce
Confidence 99999999999999999999999999987778999999999999999999999999999999999999999999999999
Q ss_pred cccccCCcccCCCCCCHhhHHHHHHHHHHHhcCCCCCcEEEecchHHHHHHHHhcCCCceeeccccccccCccCCCCHHH
Q psy9912 161 SEHNLQGIIGGDSSLSERGQLYSQALGKFIAQQDIPGLRIWTSWLKRTIQTVATCPAPQERWKALNEIDAGICEEMTYEQ 240 (366)
Q Consensus 161 s~~n~~~~~~gD~~LT~~G~~qA~~l~~~l~~~~~~~~~i~tSpl~Ra~qTA~~i~~~~~~~~~L~E~~~G~~eg~~~~e 240 (366)
+++|..++++||+|||+.|++||+.++++|+..++.++.|||||++||+|||+.++.++..++.|+|+++|.|+|+++++
T Consensus 260 t~~n~~~~~~gD~~Lt~~G~~qA~~l~~~l~~~~~~~~~v~sSpl~Ra~qTA~~l~~~~~~~~~L~E~~~G~~eg~~~~e 339 (469)
T 1bif_A 260 SELNLKGRIGGDPGLSPRGREFSKHLAQFISDQNIKDLKVFTSQMKRTIQTAEALSVPYEQFKVLNEIDAGVCEEMTYEE 339 (469)
T ss_dssp BHHHHHTBCSSCCCBCHHHHHHHHHHHHHHHHHTCTTCEEEECSSHHHHHHHTTSSSCCEECGGGSCCCCGGGTTCBHHH
T ss_pred eccccCCeeCCCCCcCHHHHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHhCCCceECcccccccCCccCCCCHHH
Confidence 99999999999999999999999999999999888888999999999999999998899999999999999999999999
Q ss_pred HHhhCchHHHhhhhCCCccCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEEechHHHHHHHHHHhcCCCCCCCCcccCCce
Q psy9912 241 IAEKYPDDFSARDCAKFTYRYPRGESYEDLVARLEPVIMELERQGNVLVVSHQAVLRCLLAYFLDKSADELPYLQVPLHT 320 (366)
Q Consensus 241 i~~~~p~~~~~~~~~~~~~~~p~gES~~d~~~R~~~~i~~l~~~~~vlIVsH~~~ir~l~~~~~~~~~~~~~~l~~~~~~ 320 (366)
+.+.+|+.+..|..+++.+++|+|||+.++..|+.+++.++.+.++|||||||++|+++++++++.+.+.++.+++|+++
T Consensus 340 ~~~~~p~~~~~~~~~~~~~~~p~gEs~~~~~~R~~~~l~~l~~~~~vlvVsHg~~ir~l~~~l~~~~~~~~~~~~~~~~~ 419 (469)
T 1bif_A 340 IQDHYPLEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKAAEELPYLKCPLHT 419 (469)
T ss_dssp HHHHCHHHHHHHHHCTTTCCCTTCCCHHHHHHHHHHHHHHHHHCSSEEEEECHHHHHHHHHHHTTCCTTTGGGCCCCTTE
T ss_pred HHHHCHHHHHHHhcCccccCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEEeCHHHHHHHHHHHhCCCHHHhhcccCCCCE
Confidence 99999999999999999999999999999999999999999877899999999999999999999999999999999999
Q ss_pred EEEEEEecCccEEEEEeeCCCCCCCCCCCCCCCCCcCC
Q psy9912 321 IIKLTPVAYGCKMEMIKLPIDAVDTHRPKPKVGSELVI 358 (366)
Q Consensus 321 v~~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 358 (366)
+++|++.+++|.++.++++.+++.+++++|.++.....
T Consensus 420 v~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 457 (469)
T 1bif_A 420 VLKLTPVAYGCKVESIFLNVAAVNTHRDRPQNVDISRP 457 (469)
T ss_dssp EEEEEECSSSEEEEEEECSCCCCCCCCCCCSCCCTTCC
T ss_pred EEEEEEeCCCCceEEEecCchhhhhhccCCcccccccC
Confidence 99999999999999999999999999999998776554
No 3
>2a6p_A Possible phosphoglycerate mutase GPM2; predicted phosphoglycerate mutase, structural genomics, PSI, structure initiative; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.2e-38 Score=286.38 Aligned_cols=189 Identities=22% Similarity=0.260 Sum_probs=166.8
Q ss_pred hhcCCCCCeeEEEeeccccccccCCcccC--CCCCCHhhHHHHHHHHHHHhcCCCCCcEEEecchHHHHHHHHhcCCCc-
Q psy9912 143 LMNIHIVPRTIYLTRHGESEHNLQGIIGG--DSSLSERGQLYSQALGKFIAQQDIPGLRIWTSWLKRTIQTVATCPAPQ- 219 (366)
Q Consensus 143 l~n~~~~~~~I~LvRHGes~~n~~~~~~g--D~~LT~~G~~qA~~l~~~l~~~~~~~~~i~tSpl~Ra~qTA~~i~~~~- 219 (366)
|||+...+++||||||||+.+|..++++| |+|||+.|++||+.++++|+..++.++.|||||+.||+|||++++.++
T Consensus 3 ~m~M~~~~~~l~lvRHG~t~~n~~~~~~g~~D~pLt~~G~~qA~~l~~~l~~~~~~~~~i~sSpl~Ra~qTA~~~~~~~~ 82 (208)
T 2a6p_A 3 AMAMGVRNHRLLLLRHGETAWSTLGRHTGGTEVELTDTGRTQAELAGQLLGELELDDPIVICSPRRRTLDTAKLAGLTVN 82 (208)
T ss_dssp ------CCCCEEEEECCCBTTGGGTBCCSSCCCCBCHHHHHHHHHHHHHHHTTCCSSCEEEECSSHHHHHHHHHTTCCCS
T ss_pred ccccCCCceEEEEEeCCCCcccccCcCcCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCEEEECCcHHHHHHHHHhCCCce
Confidence 57776667899999999999999998887 999999999999999999998887667999999999999999988888
Q ss_pred eeeccccccccCccCCCCHHHHHhhCchHHHhhhhCCCccCCCCCCCHHHHHHHHHHHHHHHHc---CCeEEEEechHHH
Q psy9912 220 ERWKALNEIDAGICEEMTYEQIAEKYPDDFSARDCAKFTYRYPRGESYEDLVARLEPVIMELER---QGNVLVVSHQAVL 296 (366)
Q Consensus 220 ~~~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~~~~~~~~~~~p~gES~~d~~~R~~~~i~~l~~---~~~vlIVsH~~~i 296 (366)
..++.|+|+++|.|+|++.+++.+.+|+ +..|..++ |+|||+.++..|+..++.++.. .++|||||||++|
T Consensus 83 ~~~~~L~E~~~G~~eg~~~~el~~~~p~-~~~~~~~~-----p~gEs~~~~~~R~~~~l~~l~~~~~~~~vlvVsHg~~i 156 (208)
T 2a6p_A 83 EVTGLLAEWDYGSYEGLTTPQIRESEPD-WLVWTHGC-----PAGESVAQVNDRADSAVALALEHMSSRDVLFVSHGHFS 156 (208)
T ss_dssp EECGGGCCCCCGGGTTCBHHHHHTTCTT-CCHHHHCC-----TTSCCHHHHHHHHHHHHHHHHHHTTTSCEEEEECHHHH
T ss_pred eeccceeecccceeCCCCHHHHHHhCcc-hhhccCCC-----CCCCCHHHHHHHHHHHHHHHHHhCCCCcEEEEeCHHHH
Confidence 8999999999999999999999999998 66565543 8999999999999999999875 3789999999999
Q ss_pred HHHHHHHhcCCCCCCCCcccCCceEEEEEEecCccEEEEEe
Q psy9912 297 RCLLAYFLDKSADELPYLQVPLHTIIKLTPVAYGCKMEMIK 337 (366)
Q Consensus 297 r~l~~~~~~~~~~~~~~l~~~~~~v~~l~~~~~~~~~~~~~ 337 (366)
+++++++++.+...+..+.+++++++.++++..++.+..++
T Consensus 157 ~~l~~~l~~~~~~~~~~~~~~n~~v~~l~~~~~~~~l~~~n 197 (208)
T 2a6p_A 157 RAVITRWVQLPLAEGSRFAMPTASIGICGFEHGVRQLAVLG 197 (208)
T ss_dssp HHHHHHHTTCCGGGGGGBCCCTTEEEEEEEETTEEEEEEEE
T ss_pred HHHHHHHhCCCHHHhhhccCCCCEEEEEEEeCCceEEEEec
Confidence 99999999999887778889999999999998877766654
No 4
>1h2e_A Phosphatase, YHFR; hydrolase, broad specificity phosphatase, DPGM homolog; 1.69A {Bacillus stearothermophilus} SCOP: c.60.1.1 PDB: 1h2f_A* 1ebb_A
Probab=100.00 E-value=4.6e-38 Score=282.17 Aligned_cols=185 Identities=28% Similarity=0.325 Sum_probs=169.2
Q ss_pred eeEEEeeccccccccCCcccC--CCCCCHhhHHHHHHHHHHHhcCCCCCcEEEecchHHHHHHHHhc----CCCceeecc
Q psy9912 151 RTIYLTRHGESEHNLQGIIGG--DSSLSERGQLYSQALGKFIAQQDIPGLRIWTSWLKRTIQTVATC----PAPQERWKA 224 (366)
Q Consensus 151 ~~I~LvRHGes~~n~~~~~~g--D~~LT~~G~~qA~~l~~~l~~~~~~~~~i~tSpl~Ra~qTA~~i----~~~~~~~~~ 224 (366)
|+||||||||+.+|..++++| |+|||+.|++||+.++++|+.. .++.|||||+.||+|||+++ +.++..++.
T Consensus 2 m~l~lvRHGet~~n~~~~~~g~~D~pLt~~G~~qA~~~~~~l~~~--~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~ 79 (207)
T 1h2e_A 2 TTLYLTRHGETKWNVERRMQGWQDSPLTEKGRQDAMRLGKRLEAV--ELAAIYTSTSGRALETAEIVRGGRLIPIYQDER 79 (207)
T ss_dssp EEEEEEECCCBHHHHTTBCCTTSCCCBCHHHHHHHHHHHHHTTTS--CCSEEEECSSHHHHHHHHHHHTTCSCCEEECGG
T ss_pred CEEEEEeCcCCcccccccCCCCCCCCCCHHHHHHHHHHHHHHcCC--CCCEEEECccHHHHHHHHHHHhcCCCCeEECcc
Confidence 489999999999999998888 9999999999999999999865 45699999999999999998 347888999
Q ss_pred ccccccCccCCCCHHHHHhhCchHHHhhhhCCCccCCCCCCCHHHHHHHHHHHHHHHHcC---CeEEEEechHHHHHHHH
Q psy9912 225 LNEIDAGICEEMTYEQIAEKYPDDFSARDCAKFTYRYPRGESYEDLVARLEPVIMELERQ---GNVLVVSHQAVLRCLLA 301 (366)
Q Consensus 225 L~E~~~G~~eg~~~~ei~~~~p~~~~~~~~~~~~~~~p~gES~~d~~~R~~~~i~~l~~~---~~vlIVsH~~~ir~l~~ 301 (366)
|+|+++|.|+|++.+++.+.+|+.+..|..++..+.+|+|||+.++..|+..++.++... ++|||||||++|+++++
T Consensus 80 L~E~~~G~~eg~~~~e~~~~~p~~~~~~~~~~~~~~~p~gEs~~~~~~R~~~~l~~l~~~~~~~~vlvVsHg~~i~~l~~ 159 (207)
T 1h2e_A 80 LREIHLGDWEGKTHDEIRQMDPIAFDHFWQAPHLYAPQRGERFCDVQQRALEAVQSIVDRHEGETVLIVTHGVVLKTLMA 159 (207)
T ss_dssp GSCCCCGGGTTCBHHHHHHHCHHHHHHHHHCGGGCCCSSSCCHHHHHHHHHHHHHHHHHHCTTCEEEEEECHHHHHHHHH
T ss_pred cccCCceecCCCCHHHHHHHCHHHHHHHhhCccccCCCCCccHHHHHHHHHHHHHHHHHhCCCCeEEEEcCHHHHHHHHH
Confidence 999999999999999999999998888888888899999999999999999999998753 78999999999999999
Q ss_pred HHhcCCCCCCCCcc-cCCceEEEEEEecCccEEEEEe
Q psy9912 302 YFLDKSADELPYLQ-VPLHTIIKLTPVAYGCKMEMIK 337 (366)
Q Consensus 302 ~~~~~~~~~~~~l~-~~~~~v~~l~~~~~~~~~~~~~ 337 (366)
++++.+...++.+. +++++++.+++...++.+..++
T Consensus 160 ~l~~~~~~~~~~~~~~~n~~i~~l~~~~~~~~l~~~n 196 (207)
T 1h2e_A 160 AFKDTPLDHLWSPPYMYGTSVTIIEVDGGTFHVAVEG 196 (207)
T ss_dssp HHTTCCGGGTTCSCCCCTTCEEEEEEETTEEEEEEEE
T ss_pred HHhCCCHHHhhhccCCCCCEEEEEEEECCEEEEEEEc
Confidence 99999988888888 9999999999988777776654
No 5
>1fzt_A Phosphoglycerate mutase; open B-sheet-helices, isomerase; NMR {Schizosaccharomyces pombe} SCOP: c.60.1.1
Probab=100.00 E-value=3e-38 Score=284.06 Aligned_cols=185 Identities=23% Similarity=0.235 Sum_probs=166.7
Q ss_pred hcCCCCCeeEEEeeccccccccCCcccC--CCCCCHhhHHHHHHHHHHHhcCCCCCcEEEecchHHHHHHHHhc----C-
Q psy9912 144 MNIHIVPRTIYLTRHGESEHNLQGIIGG--DSSLSERGQLYSQALGKFIAQQDIPGLRIWTSWLKRTIQTVATC----P- 216 (366)
Q Consensus 144 ~n~~~~~~~I~LvRHGes~~n~~~~~~g--D~~LT~~G~~qA~~l~~~l~~~~~~~~~i~tSpl~Ra~qTA~~i----~- 216 (366)
||.+.++++||||||||+.+|..++++| |+|||+.|++||+.++++|+..++.++.|||||+.||+|||+++ +
T Consensus 1 ~~~~~~~~~l~lvRHGet~~n~~~~~~g~~D~pLt~~G~~qA~~l~~~L~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~ 80 (211)
T 1fzt_A 1 MTTEAAPNLLVLTRHGESEWNKLNLFTGWKDPALSETGIKEAKLGGERLKSRGYKFDIAFTSALQRAQKTCQIILEEVGE 80 (211)
T ss_dssp CCCTTSCCEEEECBCCCBHHHHHTBCCSSSCCCBCHHHHHHHHHHHHHHHHHTCCCSEEEEESSHHHHHHHHHHHHHHTC
T ss_pred CCCCCCceEEEEEeCCCCcccccCcccCCCCCCcCHHHHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHHHhcCC
Confidence 6778888999999999999999888888 99999999999999999999876677899999999999999998 2
Q ss_pred --CCceeeccccccccCccCCCCHHHHHhhCchH-HHhhhhCCCccCCCCCCCHHHHHHHHHHHHHHHHc-----CCeEE
Q psy9912 217 --APQERWKALNEIDAGICEEMTYEQIAEKYPDD-FSARDCAKFTYRYPRGESYEDLVARLEPVIMELER-----QGNVL 288 (366)
Q Consensus 217 --~~~~~~~~L~E~~~G~~eg~~~~ei~~~~p~~-~~~~~~~~~~~~~p~gES~~d~~~R~~~~i~~l~~-----~~~vl 288 (366)
.++..++.|+|+++|.|+|++.+++.+.+|.. +..|..++ .+.+|+|||+.++..|+..++.++.. .++||
T Consensus 81 ~~~~~~~~~~L~E~~~G~~eg~~~~e~~~~~~~~~~~~w~~~~-~~~~p~gEs~~~~~~R~~~~l~~l~~~~~~~~~~vl 159 (211)
T 1fzt_A 81 PNLETIKSEKLNERYYGDLQGLNKDDARKKWGAEQVQIWRRSY-DIAPPNGESLKDTAERVLPYYKSTIVPHILKGEKVL 159 (211)
T ss_dssp TTSEEEEESTTSCCCCGGGTTCBHHHHHHHHHHHHHHHHHSSS-SCCSTTCCCHHHHHHHHHHHHHHHHTTHHHHTCCEE
T ss_pred CCCceEECcccccccCceecCCCHHHHHHhccHHHHHHHhhCC-CcCCcCCCCHHHHHHHHHHHHHHHHhhhhcCCCeEE
Confidence 57788999999999999999999999999875 44555444 78889999999999999999999843 37899
Q ss_pred EEechHHHHHHHHHHhcCCCCCCCCcccCCceEEEEEEecC
Q psy9912 289 VVSHQAVLRCLLAYFLDKSADELPYLQVPLHTIIKLTPVAY 329 (366)
Q Consensus 289 IVsH~~~ir~l~~~~~~~~~~~~~~l~~~~~~v~~l~~~~~ 329 (366)
|||||++|+++++++++.+...+..+.+++++++.++++..
T Consensus 160 vVsHg~~i~~l~~~l~~~~~~~~~~~~~~~~~i~~l~~~~~ 200 (211)
T 1fzt_A 160 IAAHGNSLRALIMDLEGLTGDQIVKRELATGVPIVYHLDKD 200 (211)
T ss_dssp EESCHHHHHHHHHHHHTCCTTTSSSCCCCBSSCEEEEBCSS
T ss_pred EEeChHHHHHHHHHHhCCCHHHHHhcCCCCCcEEEEEEcCC
Confidence 99999999999999999998888889999999999998664
No 6
>3kkk_A Phosphoglycerate mutase; PGAM, glycolysis, malaria, structural genomics, medical STRU genomics of pathogenic protozoa, MSGPP; 2.08A {Plasmodium falciparum 3D7} PDB: 1xq9_A
Probab=100.00 E-value=3.8e-37 Score=285.06 Aligned_cols=193 Identities=25% Similarity=0.281 Sum_probs=167.3
Q ss_pred CCCCeeEEEeeccccccccCCcccC--CCCCCHhhHHHHHHHHHHHhcCCCCCcEEEecchHHHHHHHHhcC-------C
Q psy9912 147 HIVPRTIYLTRHGESEHNLQGIIGG--DSSLSERGQLYSQALGKFIAQQDIPGLRIWTSWLKRTIQTVATCP-------A 217 (366)
Q Consensus 147 ~~~~~~I~LvRHGes~~n~~~~~~g--D~~LT~~G~~qA~~l~~~l~~~~~~~~~i~tSpl~Ra~qTA~~i~-------~ 217 (366)
++.+++||||||||+.+|..++++| |+|||+.|++||+.++++|+..+..++.|||||+.||+|||+++. .
T Consensus 8 ~~~~~~l~LvRHGet~~n~~~~~~G~~D~pLt~~G~~QA~~l~~~L~~~~~~~d~i~sSpl~Ra~qTA~~i~~~~~~~~~ 87 (258)
T 3kkk_A 8 HMTTYTLVLLRHGESTWNKENKFTGWTDVPLSEKGEEEAIAAGKYLKEKNFKFDVVYTSVLKRAICTAWNVLKTADLLHV 87 (258)
T ss_dssp --CCEEEEEEECCCBHHHHTTBCCTTCCCCBCHHHHHHHHHHHHHHHHTTCCCSEEEECSSHHHHHHHHHHHHHHTCTTS
T ss_pred ccceeEEEEEECCCccccccCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEECchHHHHHHHHHHHHhcCCCCC
Confidence 4688999999999999999999998 999999999999999999998777888999999999999999982 5
Q ss_pred CceeeccccccccCccCCCCHHHHHhhCchHH-HhhhhC-------------------C-----CccCCCCCCCHHHHHH
Q psy9912 218 PQERWKALNEIDAGICEEMTYEQIAEKYPDDF-SARDCA-------------------K-----FTYRYPRGESYEDLVA 272 (366)
Q Consensus 218 ~~~~~~~L~E~~~G~~eg~~~~ei~~~~p~~~-~~~~~~-------------------~-----~~~~~p~gES~~d~~~ 272 (366)
++..++.|+|+++|.|+|++++++.+.||+.. ..|..+ + ...++|+|||+.++..
T Consensus 88 ~~~~~~~L~E~~~G~~eG~~~~ei~~~~p~~~~~~w~~~~~~~p~~~~~~~~~~~~~d~~~~~~~~~~~p~gEs~~~~~~ 167 (258)
T 3kkk_A 88 PVVKTWRLNERHCGSLQGLNKSETAKKYGEEQVKIWRRSYDIPPPKLDKEDNRWPGHNVVYKNVPKDALPFTECLKDTVE 167 (258)
T ss_dssp CEEECGGGCCCCCGGGTTSBHHHHHHHTCHHHHHHHHHCSSCCCCCCCTTSTTCGGGCGGGTTSCGGGSCSCCCHHHHHH
T ss_pred CeeEccccceeccCcccCCCHHHHHHHhHHHHHHHHhhhcccCCcccccccccccccccccccccccCCCCCCCHHHHHH
Confidence 78899999999999999999999999999863 333321 1 1235789999999999
Q ss_pred HHHHHHHHHH-----cCCeEEEEechHHHHHHHHHHhcCCCCCCCCcccCCceEEEEEEecCccEEEEEeeC
Q psy9912 273 RLEPVIMELE-----RQGNVLVVSHQAVLRCLLAYFLDKSADELPYLQVPLHTIIKLTPVAYGCKMEMIKLP 339 (366)
Q Consensus 273 R~~~~i~~l~-----~~~~vlIVsH~~~ir~l~~~~~~~~~~~~~~l~~~~~~v~~l~~~~~~~~~~~~~~~ 339 (366)
|+..++.++. ..++|||||||++|+++++++++.+.+.+..+.+++++++.|++++.+..+....++
T Consensus 168 Rv~~~l~~l~~~~~~~~~~vlvVsHg~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 239 (258)
T 3kkk_A 168 RVLPFWFDHIAPDILANKKVMVAAHGNSLRGLVKHLDNLSEADVLELNIPTGVPLVYELDENLKPIKHYYLL 239 (258)
T ss_dssp HHHHHHHHTHHHHHHTTCCEEEEECHHHHHHHHHHHTTCCHHHHHHCCCCTTCCEEEEECTTCCEEEEEECC
T ss_pred HHHHHHHHHHhhhccCCCEEEEEcCHHHHHHHHHHHhCCCHHHHhhccCCCCceEEEEECCCCceeeecccC
Confidence 9999999852 238999999999999999999999988888899999999999998876656555544
No 7
>3gp3_A 2,3-bisphosphoglycerate-dependent phosphoglycerat; phosphoglyceromutase, decode, SBRI, niaid, UWPPG, glycolysis isomerase; HET: PG4 SEP; 1.50A {Burkholderia pseudomallei} SCOP: c.60.1.1 PDB: 3fdz_A* 3ezn_A* 3gp5_A* 3gw8_A* 3lnt_A
Probab=100.00 E-value=1.4e-36 Score=281.24 Aligned_cols=192 Identities=25% Similarity=0.251 Sum_probs=167.4
Q ss_pred CCCeeEEEeeccccccccCCcccC--CCCCCHhhHHHHHHHHHHHhcCCCCCcEEEecchHHHHHHHHhc----C---CC
Q psy9912 148 IVPRTIYLTRHGESEHNLQGIIGG--DSSLSERGQLYSQALGKFIAQQDIPGLRIWTSWLKRTIQTVATC----P---AP 218 (366)
Q Consensus 148 ~~~~~I~LvRHGes~~n~~~~~~g--D~~LT~~G~~qA~~l~~~l~~~~~~~~~i~tSpl~Ra~qTA~~i----~---~~ 218 (366)
..+-+.||||||||++|..++++| |+|||+.|++||+.++++|+..++.++.|||||+.||+|||+++ + .+
T Consensus 7 ~~~~~~~lvRHGeT~~N~~~~~~G~~D~pLT~~G~~QA~~l~~~L~~~~~~~d~i~sSpl~Ra~qTA~~i~~~~~~~~~~ 86 (257)
T 3gp3_A 7 HHMYKLVLIRHGESTWNKENRFTGWVDVDLTEQGNREARQAGQLLKEAGYTFDIAYTSVLKRAIRTLWHVQDQMDLMYVP 86 (257)
T ss_dssp --CEEEEEEECCCBHHHHTTBCCTTCCCCBCHHHHHHHHHHHHHHHHTTCCCSEEEECSSHHHHHHHHHHHHHHTCTTSC
T ss_pred cceeeEEEEECCCCcccccCccCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEeCChHHHHHHHHHHHHhcCCCCCc
Confidence 346789999999999999999999 99999999999999999999877778899999999999999998 2 57
Q ss_pred ceeeccccccccCccCCCCHHHHHhhCchHH-HhhhhCC------------------------CccCCCCCCCHHHHHHH
Q psy9912 219 QERWKALNEIDAGICEEMTYEQIAEKYPDDF-SARDCAK------------------------FTYRYPRGESYEDLVAR 273 (366)
Q Consensus 219 ~~~~~~L~E~~~G~~eg~~~~ei~~~~p~~~-~~~~~~~------------------------~~~~~p~gES~~d~~~R 273 (366)
+..++.|+|+++|.|+|++.+++.+.+|+.. ..|..+. ....+|+|||+.++..|
T Consensus 87 i~~~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~~w~~~~~~~pp~~~~~~~~~~~~d~~~~~~~~~~~p~gEs~~~~~~R 166 (257)
T 3gp3_A 87 VVHSWRLNERHYGALSGLNKAETAAKYGDEQVLVWRRSYDTPPPALEPGDERAPYADPRYAKVPREQLPLTECLKDTVAR 166 (257)
T ss_dssp EEECGGGSCCCCGGGTTCBHHHHHHHHCHHHHHHHHHCTTCCCCCCCTTCTTCSTTCGGGTTSCGGGSCSSCCHHHHHHH
T ss_pred eeECCCccccCCccccCCCHHHHHHHhhHHHHHHHHhccccCCcccccccccccccccccccccccCCCCCCCHHHHHHH
Confidence 8899999999999999999999999999863 3343221 12357899999999999
Q ss_pred HHHHHHHHHc-----CCeEEEEechHHHHHHHHHHhcCCCCCCCCcccCCceEEEEEEecCccEEEEEeeC
Q psy9912 274 LEPVIMELER-----QGNVLVVSHQAVLRCLLAYFLDKSADELPYLQVPLHTIIKLTPVAYGCKMEMIKLP 339 (366)
Q Consensus 274 ~~~~i~~l~~-----~~~vlIVsH~~~ir~l~~~~~~~~~~~~~~l~~~~~~v~~l~~~~~~~~~~~~~~~ 339 (366)
+..++.++.. .++|||||||++|++++++++|.+.+.+..+.+++++++.|+++..+..+....++
T Consensus 167 v~~~l~~l~~~~~~~~~~vlvVsHg~~i~~ll~~l~g~~~~~~~~~~~~n~sv~~l~~~~~~~~~~~~~~~ 237 (257)
T 3gp3_A 167 VLPLWNESIAPAVKAGKQVLIAAHGNSLRALIKYLDGISDADIVGLNIPNGVPLVYELDESLTPIRHYYLG 237 (257)
T ss_dssp HHHHHHHTHHHHHHTTCCEEEEECHHHHHHHHHHHTTCCTTGGGGCCCCTTCCEEEEECTTSCEEEEEECC
T ss_pred HHHHHHHHHHHhhcCCCEEEEEeCcHHHHHHHHHHhCCCHHHHhhccCCCCeeEEEEECCCcceeeeeccC
Confidence 9999999742 38999999999999999999999999999999999999999999876666655543
No 8
>4emb_A 2,3-bisphosphoglycerate-dependent phosphoglycerat; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.30A {Borrelia burgdorferi}
Probab=100.00 E-value=1.8e-36 Score=283.18 Aligned_cols=192 Identities=24% Similarity=0.247 Sum_probs=168.7
Q ss_pred CCCeeEEEeeccccccccCCcccC--CCCCCHhhHHHHHHHHHHHhcCCCCCcEEEecchHHHHHHHHhcC-------CC
Q psy9912 148 IVPRTIYLTRHGESEHNLQGIIGG--DSSLSERGQLYSQALGKFIAQQDIPGLRIWTSWLKRTIQTVATCP-------AP 218 (366)
Q Consensus 148 ~~~~~I~LvRHGes~~n~~~~~~g--D~~LT~~G~~qA~~l~~~l~~~~~~~~~i~tSpl~Ra~qTA~~i~-------~~ 218 (366)
.++++||||||||+.+|..++++| |+|||+.|++||+.++++|+..+..++.|||||+.||+|||+++. .+
T Consensus 25 ~mm~~i~LvRHGet~~n~~~~~~G~~D~pLT~~G~~QA~~l~~~L~~~~~~~d~v~sSpl~Ra~qTA~~i~~~~~~~~~~ 104 (274)
T 4emb_A 25 DFMYKLVLVRHGESEWNKENLFTGWTDVKLSDKGIDEAVEAGLLLKQEGYSFDIAFSSLLSRANDTLNIILRELGQSYIS 104 (274)
T ss_dssp -CCEEEEEEECCCBTTTTTTCCCTTCCCCBCHHHHHHHHHHHHHHHHTTCCCSEEEECSSHHHHHHHHHHHHHTTCTTSE
T ss_pred hhceEEEEEeCCCCcccccCcccCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEECChHHHHHHHHHHHHhcCCCCCC
Confidence 457899999999999999999988 999999999999999999998777788999999999999999982 47
Q ss_pred ceeeccccccccCccCCCCHHHHHhhCchHH-HhhhhCC------------------------CccCCCCCCCHHHHHHH
Q psy9912 219 QERWKALNEIDAGICEEMTYEQIAEKYPDDF-SARDCAK------------------------FTYRYPRGESYEDLVAR 273 (366)
Q Consensus 219 ~~~~~~L~E~~~G~~eg~~~~ei~~~~p~~~-~~~~~~~------------------------~~~~~p~gES~~d~~~R 273 (366)
+..++.|+|+++|.|+|++++++.+.+|+.. ..|..+. ..+.+|+|||+.++..|
T Consensus 105 ~~~~~~L~E~~~G~~eG~~~~ei~~~~p~~~~~~w~~~~~~~pp~~~~~~~~~~~~d~~~~~~~~~~~p~gEs~~~~~~R 184 (274)
T 4emb_A 105 VKKTWRLNERHYGALQGLNKSETAAKYGEDKVLIWRRSYDVPPMSLDESDDRHPIKDPRYKHIPKRELPSTECLKDTVAR 184 (274)
T ss_dssp EEECGGGSCCCCGGGTTCCHHHHHHHHCHHHHHHHHHCSSCCCCCCCTTSTTCGGGSGGGTTSCGGGSCSCCCHHHHHHH
T ss_pred eeECccccccccccccCCCHHHHHHHhHHHHHHHHHhccccCCcccccccccccccccccccccccCCCCCCCHHHHHHH
Confidence 8899999999999999999999999999863 3333210 12367999999999999
Q ss_pred HHHHHHHHHc-----CCeEEEEechHHHHHHHHHHhcCCCCCCCCcccCCceEEEEEEecCccEEEEEeeC
Q psy9912 274 LEPVIMELER-----QGNVLVVSHQAVLRCLLAYFLDKSADELPYLQVPLHTIIKLTPVAYGCKMEMIKLP 339 (366)
Q Consensus 274 ~~~~i~~l~~-----~~~vlIVsH~~~ir~l~~~~~~~~~~~~~~l~~~~~~v~~l~~~~~~~~~~~~~~~ 339 (366)
+..++.++.. .++|||||||++|+++++++++.+.+.+..+.+++++++.+++++.+..+....++
T Consensus 185 v~~~l~~l~~~~~~~~~~vlvVsHg~~i~~ll~~l~g~~~~~~~~~~~~n~sv~~l~~~~~~~~~~~~~ln 255 (274)
T 4emb_A 185 VIPYWTDEIAKEVLEGKKVIVAAHGNSLRALVKYFDNLSEEDVLKLNIPTGIPLVYELDKDLNPIKHYYLG 255 (274)
T ss_dssp HHHHHHHTHHHHHHTTCCEEEEECHHHHHHHHHHHHTCCHHHHHHCCCCTTCCEEEEECTTCCEEEEEECS
T ss_pred HHHHHHHHHhhhhcCCCEEEEEeCHHHHHHHHHHHhCCCHHHHhhccCCCCeEEEEEEcCCCcEEEeeecC
Confidence 9999998742 37999999999999999999999988888899999999999999888888776664
No 9
>3hjg_A Putative alpha-ribazole-5'-phosphate phosphatase COBC; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 2.80A {Vibrio parahaemolyticus}
Probab=100.00 E-value=2.1e-36 Score=272.59 Aligned_cols=183 Identities=21% Similarity=0.200 Sum_probs=158.7
Q ss_pred CCCeeEEEeeccccccccCCcccC--CCCCCHhhHHHHHHHHHHHhcCCCCCcEEEecchHHHHHHHHhc----CCCcee
Q psy9912 148 IVPRTIYLTRHGESEHNLQGIIGG--DSSLSERGQLYSQALGKFIAQQDIPGLRIWTSWLKRTIQTVATC----PAPQER 221 (366)
Q Consensus 148 ~~~~~I~LvRHGes~~n~~~~~~g--D~~LT~~G~~qA~~l~~~l~~~~~~~~~i~tSpl~Ra~qTA~~i----~~~~~~ 221 (366)
+++++||||||||+.+| ++++| |+|||+.|++||+.+++.| +..++.|||||+.||+|||+++ +.++..
T Consensus 3 m~~~~i~lvRHGet~~n--~~~~g~~D~pLt~~G~~QA~~~~~~l---~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~ 77 (213)
T 3hjg_A 3 LKTLNIYLMRHGKVDAA--PGLHGQTDLKVKEAEQQQIAMAWKTK---GYDVAGIISSPLSRCHDLAQILAEQQLLPMTT 77 (213)
T ss_dssp -CEEEEEEEECCCCSSC--SBCCSSSCCCCCHHHHHHHHHHHHHT---TCCCSCEEECSSHHHHHHHHHHHHHHTCCEEE
T ss_pred CceeEEEEECCCCcCCC--CcccCCCCCCCCHHHHHHHHHHHHhc---CCCCCEEEECChHHHHHHHHHHHhccCCCcEE
Confidence 46789999999999997 45565 9999999999999999988 3567799999999999999998 568999
Q ss_pred eccccccccCccCCCCHHHHHhhCchHHHhhhhCCCccCCCCCCCHHHHHHHHHHHHHHHHcC--CeEEEEechHHHHHH
Q psy9912 222 WKALNEIDAGICEEMTYEQIAEKYPDDFSARDCAKFTYRYPRGESYEDLVARLEPVIMELERQ--GNVLVVSHQAVLRCL 299 (366)
Q Consensus 222 ~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~~~~~~~~~~~p~gES~~d~~~R~~~~i~~l~~~--~~vlIVsH~~~ir~l 299 (366)
++.|+|+++|.|+|++++++.+.+|... .++.++..+.+|+|||+.++..|+..++.++... ++|||||||++|+++
T Consensus 78 ~~~L~E~~~G~~eg~~~~e~~~~~~~~~-~~~~~~~~~~~p~gEs~~~~~~R~~~~l~~l~~~~~~~vlvVsHg~~i~~l 156 (213)
T 3hjg_A 78 EDDLQEMDFGDFDGMPFDLLTEHWKKLD-AFWQSPAHHSLPNAESLSTFSQRVSRAWSQIINDINDNLLIVTHGGVIRII 156 (213)
T ss_dssp CGGGSCCCCTTSTTCBTTHHHHSCCCTH-HHHHCGGGCCCTTCCCHHHHHHHHHHHHHHHHHHCCSCEEEEECHHHHHHH
T ss_pred ccccEeCcCCccCCcCHHHHHHhhHHHH-HHHhCcccCCCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEEeCHHHHHHH
Confidence 9999999999999999999999877654 4446777889999999999999999999998653 789999999999999
Q ss_pred HHHHhcCC---CCCCCCcccCCceEEEEEEecCccEEEEE
Q psy9912 300 LAYFLDKS---ADELPYLQVPLHTIIKLTPVAYGCKMEMI 336 (366)
Q Consensus 300 ~~~~~~~~---~~~~~~l~~~~~~v~~l~~~~~~~~~~~~ 336 (366)
+++++|.+ ......+.+++++++.|++.+.+..+..+
T Consensus 157 ~~~l~g~~~~~~~~~~~~~~~n~si~~l~~~~~~~~~~~l 196 (213)
T 3hjg_A 157 LAHVLGVDWRNPQWYSTLAIGNASVTHITITIDDQIYASV 196 (213)
T ss_dssp HHHHTTCCTTCTHHHHHBCCCTTEEEEEEEEESSSEEEEE
T ss_pred HHHHhCCCccccchhcccccCCCEEEEEEEeCCCCceEEE
Confidence 99999988 22234678999999999999888766444
No 10
>1e58_A Phosphoglycerate mutase; phosphohistidine, glycolysis and gluconeogenesis, isomerase; HET: NEP; 1.25A {Escherichia coli} SCOP: c.60.1.1 PDB: 1e59_A*
Probab=100.00 E-value=2.8e-36 Score=277.92 Aligned_cols=189 Identities=27% Similarity=0.312 Sum_probs=161.2
Q ss_pred CeeEEEeeccccccccCCcccC--CCCCCHhhHHHHHHHHHHHhcCCCCCcEEEecchHHHHHHHHhcC-------CCce
Q psy9912 150 PRTIYLTRHGESEHNLQGIIGG--DSSLSERGQLYSQALGKFIAQQDIPGLRIWTSWLKRTIQTVATCP-------APQE 220 (366)
Q Consensus 150 ~~~I~LvRHGes~~n~~~~~~g--D~~LT~~G~~qA~~l~~~l~~~~~~~~~i~tSpl~Ra~qTA~~i~-------~~~~ 220 (366)
|++||||||||+.+|..++++| |.|||+.|++||+.++++|+..+..++.|||||+.||+|||+++. .++.
T Consensus 2 M~~l~LvRHGet~~n~~~~~~G~~D~pLt~~G~~QA~~l~~~l~~~~~~~d~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~ 81 (249)
T 1e58_A 2 VTKLVLVRHGESQWNKENRFTGWYDVDLSEKGVSEAKAAGKLLKEEGYSFDFAYTSVLKRAIHTLWNVLDELDQAWLPVE 81 (249)
T ss_dssp CEEEEEEECCCBHHHHTTBCCTTCCCCBCHHHHHHHHHHHHHHHHTTCCCSEEEECSSHHHHHHHHHHHHHHTCTTSCEE
T ss_pred ceEEEEEeCCCCcccccCCccCcCCCCCCHHHHHHHHHHHHHHHhcCCCCcEEEECCcHHHHHHHHHHHHhcCCCCCCee
Confidence 4799999999999999999988 999999999999999999998777788999999999999999982 5778
Q ss_pred eeccccccccCccCCCCHHHHHhhCchH-HHhhhhCC--------------------C----ccCCCCCCCHHHHHHHHH
Q psy9912 221 RWKALNEIDAGICEEMTYEQIAEKYPDD-FSARDCAK--------------------F----TYRYPRGESYEDLVARLE 275 (366)
Q Consensus 221 ~~~~L~E~~~G~~eg~~~~ei~~~~p~~-~~~~~~~~--------------------~----~~~~p~gES~~d~~~R~~ 275 (366)
.++.|+|+++|.|+|++.+++.+.+|.. +..|..+. + ...+|+|||+.++..|+.
T Consensus 82 ~~~~L~E~~~G~~eG~~~~ei~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gEs~~~~~~Rv~ 161 (249)
T 1e58_A 82 KSWKLNERHYGALQGLNKAETAEKYGDEQVKQWRRGFAVTPPELTKDDERYPGHDPRYAKLSEKELPLTESLALTIDRVI 161 (249)
T ss_dssp ECGGGCCCCCGGGTTCBHHHHHHHHCHHHHHHHHHCTTCCCCCCCTTSTTCGGGSGGGTTCCTTTSCSCCCHHHHHHHHH
T ss_pred eCcccccccCcccCCCcHHHHHHHhhHHHHHHHHhccccCCcccccccccccccchhhhccccCCCCCCCCHHHHHHHHH
Confidence 8999999999999999999999999875 33333211 0 135689999999999999
Q ss_pred HHHHH-HHc----CCeEEEEechHHHHHHHHHHhcCCCCCCCCcccCCceEEEEEEecCccEEEEEee
Q psy9912 276 PVIME-LER----QGNVLVVSHQAVLRCLLAYFLDKSADELPYLQVPLHTIIKLTPVAYGCKMEMIKL 338 (366)
Q Consensus 276 ~~i~~-l~~----~~~vlIVsH~~~ir~l~~~~~~~~~~~~~~l~~~~~~v~~l~~~~~~~~~~~~~~ 338 (366)
.++.+ +.. .++|||||||++|+++++++++.+...++.+.+++++++.++++.....+....+
T Consensus 162 ~~l~~~i~~~~~~~~~vlvVsHg~~i~~l~~~l~~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~ 229 (249)
T 1e58_A 162 PYWNETILPRMKSGERVIIAAHGNSLRALVKYLDNMSEEEILELNIPTGVPLVYEFDENFKPLKRYYL 229 (249)
T ss_dssp HHHHHTHHHHHHTTCCEEEEECHHHHHHHHHHHTTCCHHHHHHCCCCTTCCEEEEECTTCCEEEEEEC
T ss_pred HHHHHHHHhhccCCCEEEEEcChHHHHHHHHHHhCCCHHHHhhccCCCceeEEEEECCCceEeeeeec
Confidence 99998 542 3789999999999999999999988777778899999999999765333333333
No 11
>3d8h_A Glycolytic phosphoglycerate mutase; structural genomics, malaria, glycolysis, I structural genomics consortium, SGC; 2.01A {Cryptosporidium parvum}
Probab=100.00 E-value=6.3e-36 Score=278.57 Aligned_cols=190 Identities=26% Similarity=0.305 Sum_probs=163.5
Q ss_pred CeeEEEeeccccccccCCcccC--CCCCCHhhHHHHHHHHHHHhcCCCCCcEEEecchHHHHHHHHhcC-------CCce
Q psy9912 150 PRTIYLTRHGESEHNLQGIIGG--DSSLSERGQLYSQALGKFIAQQDIPGLRIWTSWLKRTIQTVATCP-------APQE 220 (366)
Q Consensus 150 ~~~I~LvRHGes~~n~~~~~~g--D~~LT~~G~~qA~~l~~~l~~~~~~~~~i~tSpl~Ra~qTA~~i~-------~~~~ 220 (366)
|++||||||||+.+|..++++| |.|||+.|++||+.++++|+..++.++.|||||+.||+|||+++. .++.
T Consensus 20 M~~l~LvRHGet~~n~~~~~~G~~D~pLt~~G~~QA~~l~~~L~~~~~~~d~i~sSpl~Ra~qTA~~i~~~~~~~~~~i~ 99 (267)
T 3d8h_A 20 TYKLTLIRHGESEWNKENRFTGWTDVSLSEQGVSEAIEAGRMLLEKGFKFDVVYTSVLKRAIMTTWTVLKELGNINCPII 99 (267)
T ss_dssp CEEEEEEECCCBTTTTTTBCCTTCCCCBCHHHHHHHHHHHHHHHHTTCCCSEEEECSSHHHHHHHHHHHHHHTCTTSCEE
T ss_pred ceEEEEEeCCCCccccccccCCCCCCCcCHHHHHHHHHHHHHHHhcCCCCCEEEECChHHHHHHHHHHHHhcCCCCCCee
Confidence 4799999999999999999998 999999999999999999998777788999999999999999982 5788
Q ss_pred eeccccccccCccCCCCHHHHHhhCchHH-HhhhhCC--------------------C----ccCCCCCCCHHHHHHHHH
Q psy9912 221 RWKALNEIDAGICEEMTYEQIAEKYPDDF-SARDCAK--------------------F----TYRYPRGESYEDLVARLE 275 (366)
Q Consensus 221 ~~~~L~E~~~G~~eg~~~~ei~~~~p~~~-~~~~~~~--------------------~----~~~~p~gES~~d~~~R~~ 275 (366)
.++.|+|+++|.|+|++.+++.+.+|... ..|..+. + .+.+|+|||+.++..|+.
T Consensus 100 ~~~~L~E~~~G~~eG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gEs~~~~~~Rv~ 179 (267)
T 3d8h_A 100 NHWRLNERHYGALQGLNKSETASKFGEDQVKIWRRSFDVPPPVLEKSDPRWPGNELIYKGICPSCLPTTECLKDTVERVK 179 (267)
T ss_dssp ECGGGSCCCCGGGTTCBHHHHHHHSCHHHHHHHHHCSSCCCCCCCTTSTTSGGGSGGGTTSCGGGSCSCCCHHHHHHHHH
T ss_pred ECcccccccCCcccCCCHHHHHHhhhHHHHHHHHhccccCCcccccccccccccchhhhccccCCCCCCCCHHHHHHHHH
Confidence 89999999999999999999999999753 3332210 0 135789999999999999
Q ss_pred HHHHH-HHc----CCeEEEEechHHHHHHHHHHhcCCCCCCCCcccCCceEEEEEEecCccEEEEEeeC
Q psy9912 276 PVIME-LER----QGNVLVVSHQAVLRCLLAYFLDKSADELPYLQVPLHTIIKLTPVAYGCKMEMIKLP 339 (366)
Q Consensus 276 ~~i~~-l~~----~~~vlIVsH~~~ir~l~~~~~~~~~~~~~~l~~~~~~v~~l~~~~~~~~~~~~~~~ 339 (366)
.++.+ +.. .++|||||||++|+++++++++.+...++.+.+++++++.++++.....+....++
T Consensus 180 ~~l~~~i~~~~~~~~~vlvVsHg~~ir~l~~~l~~~~~~~~~~~~~~n~~v~~l~~~~~~~~~~~~~~~ 248 (267)
T 3d8h_A 180 PYFEDVIAPSIMSGKSVLVSAHGNSLRALLYLLEGMTPEQILEVNIPTACPLVLELDDYLKVTKKYYLI 248 (267)
T ss_dssp HHHHHTHHHHHHTTCCEEEEECHHHHHHHHHHHHTCCHHHHTTCCCCTTCCEEEEECTTSCEEEEEECC
T ss_pred HHHHHHHHhhccCCCeEEEEeCHHHHHHHHHHHhCCCHHHhhcccCCCCeEEEEEECCCccEEeeeecC
Confidence 99998 542 37899999999999999999999888788889999999999998765554444443
No 12
>2hhj_A Bisphosphoglycerate mutase; isomerase; HET: NEP DG2 3PG; 1.50A {Homo sapiens} SCOP: c.60.1.1 PDB: 1t8p_A* 2f90_A* 2a9j_A* 2h4z_A* 2h52_A* 2h4x_A* 3nfy_A
Probab=100.00 E-value=5.4e-36 Score=279.03 Aligned_cols=180 Identities=24% Similarity=0.276 Sum_probs=158.7
Q ss_pred CCeeEEEeeccccccccCCcccC--CCCCCHhhHHHHHHHHHHHhcCCCCCcEEEecchHHHHHHHHhcC-------CCc
Q psy9912 149 VPRTIYLTRHGESEHNLQGIIGG--DSSLSERGQLYSQALGKFIAQQDIPGLRIWTSWLKRTIQTVATCP-------APQ 219 (366)
Q Consensus 149 ~~~~I~LvRHGes~~n~~~~~~g--D~~LT~~G~~qA~~l~~~l~~~~~~~~~i~tSpl~Ra~qTA~~i~-------~~~ 219 (366)
++++||||||||+.+|..++++| |+|||+.|++||+.++++|+..++.++.|||||+.||+|||+++. .++
T Consensus 2 ~~~~l~LvRHGet~~n~~~~~~G~~D~pLt~~G~~QA~~l~~~L~~~~~~~d~i~sSpl~Ra~qTA~~i~~~~~~~~~~v 81 (267)
T 2hhj_A 2 SKYKLIMLRHGEGAWNKENRFCSWVDQKLNSEGMEEARNCGKQLKALNFEFDLVFTSVLNRSIHTAWLILEELGQEWVPV 81 (267)
T ss_dssp CCEEEEEEECCCBHHHHTTBCCTTSCCCBCHHHHHHHHHHHHHHHHTTCCCSEEEECSSHHHHHHHHHHHHHHTCTTSCE
T ss_pred CceEEEEEeCCCCCccccCCcCCCCCCCcCHHHHHHHHHHHHHHHhcCCCcCEEEECCcHHHHHHHHHHHHhcCCCCCCe
Confidence 46899999999999999999998 999999999999999999998777788999999999999999982 578
Q ss_pred eeeccccccccCccCCCCHHHHHhhCchH-HHhhhh--------------------CCCcc--------CCCCCCCHHHH
Q psy9912 220 ERWKALNEIDAGICEEMTYEQIAEKYPDD-FSARDC--------------------AKFTY--------RYPRGESYEDL 270 (366)
Q Consensus 220 ~~~~~L~E~~~G~~eg~~~~ei~~~~p~~-~~~~~~--------------------~~~~~--------~~p~gES~~d~ 270 (366)
..++.|+|+++|.|+|++.+++.+.+|+. +..|.. ....+ .+|+|||+.++
T Consensus 82 ~~~~~L~E~~~G~~eG~~~~e~~~~~p~~~~~~w~~~~~~~p~~~~~~~~~~~~~~~d~~~~~~~~~~~~~p~gEs~~~~ 161 (267)
T 2hhj_A 82 ESSWRLNERHYGALIGLNREQMALNHGEEQVRLWRRSYNVTPPPIEESHPYYQEIYNDRRYKVCDVPLDQLPRSESLKDV 161 (267)
T ss_dssp EECGGGSCCCCGGGTTCBHHHHHHHHCHHHHHHHHHCSSCCCCCCCTTSTTHHHHHTCGGGTSSSSCGGGSCSSCCHHHH
T ss_pred eEcccccccccCCCCCCCHHHHHHHhhHHHHHHHHhcccCCCCcccccccccccccccccccccccccCCCCCCCCHHHH
Confidence 88999999999999999999999999975 333321 11122 26899999999
Q ss_pred HHHHHHHHHH-HHc----CCeEEEEechHHHHHHHHHHhcCCCCCCCCcccCCceEEEEEEec
Q psy9912 271 VARLEPVIME-LER----QGNVLVVSHQAVLRCLLAYFLDKSADELPYLQVPLHTIIKLTPVA 328 (366)
Q Consensus 271 ~~R~~~~i~~-l~~----~~~vlIVsH~~~ir~l~~~~~~~~~~~~~~l~~~~~~v~~l~~~~ 328 (366)
..|+.+++.+ +.. .++|||||||++|+++++++++.+.+.+..+.+++++++.++++.
T Consensus 162 ~~Rv~~~l~~~i~~~~~~~~~vlvVsHg~~ir~l~~~l~~~~~~~~~~~~~~n~s~~~~~~~~ 224 (267)
T 2hhj_A 162 LERLLPYWNERIAPEVLRGKTILISAHGNSSRALLKHLEGISDEDIINITLPTGVPILLELDE 224 (267)
T ss_dssp HHHHHHHHHHHTHHHHHTTCCEEEEECHHHHHHHHHHHHTCCTTGGGGCCCCTTCCEEEEECT
T ss_pred HHHHHHHHHHHHHhhccCCCEEEEEcCcHHHHHHHHHHhCCCHHHhhccccCCCeEEEEEEcC
Confidence 9999999998 643 378999999999999999999999988888999999999999875
No 13
>1yfk_A Phosphoglycerate mutase 1; alpha/beta, isomerase, hydrolase; HET: CIT; 2.70A {Homo sapiens} PDB: 1yjx_A*
Probab=100.00 E-value=7.2e-36 Score=277.43 Aligned_cols=182 Identities=25% Similarity=0.217 Sum_probs=157.5
Q ss_pred CCeeEEEeeccccccccCCcccC--CCCCCHhhHHHHHHHHHHHhcCCCCCcEEEecchHHHHHHHHhcC-------CCc
Q psy9912 149 VPRTIYLTRHGESEHNLQGIIGG--DSSLSERGQLYSQALGKFIAQQDIPGLRIWTSWLKRTIQTVATCP-------APQ 219 (366)
Q Consensus 149 ~~~~I~LvRHGes~~n~~~~~~g--D~~LT~~G~~qA~~l~~~l~~~~~~~~~i~tSpl~Ra~qTA~~i~-------~~~ 219 (366)
+|++||||||||+.+|..++++| |.|||+.|++||+.++++|+..+..++.|||||+.||+|||+++. .++
T Consensus 2 ~M~~l~LvRHGqt~~n~~~~~~G~~D~pLt~~G~~QA~~l~~~L~~~~~~~d~i~sSpl~Ra~qTA~~i~~~~~~~~~~v 81 (262)
T 1yfk_A 2 AAYKLVLIRHGESAWNLENRFSGWYDADLSPAGHEEAKRGGQALRDAGYEFDICFTSVQKRAIRTLWTVLDAIDQMWLPV 81 (262)
T ss_dssp -CEEEEEEECCCBTTTTTTBCCTTSCCCBCHHHHHHHHHHHHHHHHHTCCCSEEEECSCHHHHHHHHHHHHHTTCTTSCE
T ss_pred CceEEEEEeCCCcccccccCcCCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCEEEECCcHHHHHHHHHHHHhcCCCCCCe
Confidence 46799999999999999999998 999999999999999999997777788999999999999999982 577
Q ss_pred eeeccccccccCccCCCCHHHHHhhCchHH-HhhhhC---------------------CC-----ccCCCCCCCHHHHHH
Q psy9912 220 ERWKALNEIDAGICEEMTYEQIAEKYPDDF-SARDCA---------------------KF-----TYRYPRGESYEDLVA 272 (366)
Q Consensus 220 ~~~~~L~E~~~G~~eg~~~~ei~~~~p~~~-~~~~~~---------------------~~-----~~~~p~gES~~d~~~ 272 (366)
..++.|+|+++|.|+|++.+++.+.+|... ..|..+ +. ...+|+|||+.++..
T Consensus 82 ~~~~~L~E~~~G~~eG~~~~ei~~~~~~~~~~~w~~~~~~~p~~~~~~~~~~~~i~~d~~~~~~~~~~~p~gEs~~~~~~ 161 (262)
T 1yfk_A 82 VRTWRLNERHYGGLTGLNKAETAAKHGEAQVKIWRRSYDVPPPPMEPDHPFYSNISKDRRYADLTEDQLPSCESLKDTIA 161 (262)
T ss_dssp EECGGGSCCCCGGGTTSBHHHHHHHHCHHHHHHHHHCSSCCCCCCCTTSTTHHHHHTCGGGTTSCTTTSCSCCCHHHHHH
T ss_pred eeCcccccccCcccCCCcHHHHHHHccHHHHHHHHhccccCCCcccccccccccccccccccccccCCCCCCCCHHHHHH
Confidence 889999999999999999999999998653 333221 10 124689999999999
Q ss_pred HHHHHHHHHH-----cCCeEEEEechHHHHHHHHHHhcCCCCCCCCcccCCceEEEEEEecCc
Q psy9912 273 RLEPVIMELE-----RQGNVLVVSHQAVLRCLLAYFLDKSADELPYLQVPLHTIIKLTPVAYG 330 (366)
Q Consensus 273 R~~~~i~~l~-----~~~~vlIVsH~~~ir~l~~~~~~~~~~~~~~l~~~~~~v~~l~~~~~~ 330 (366)
|+.+++.++. ..++|||||||++|+++++++++.+...++.+.+|+++++.++++...
T Consensus 162 Rv~~~l~~li~~~~~~~~~vlvVsHg~~ir~l~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~ 224 (262)
T 1yfk_A 162 RALPFWNEEIVPQIKEGKRVLIAAHGNSLRGIVKHLEGLSEEAIMELNLPTGIPIVYELDKNL 224 (262)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEECHHHHHHHHHHHHTCCHHHHHTCCCCSSSCEEEEECTTS
T ss_pred HHHHHHHHHHHhhccCCCeEEEEcChHHHHHHHHHHhCCCHHHHhccCCCCCeEEEEEEcCCc
Confidence 9999998852 237899999999999999999999888777889999999999987643
No 14
>1qhf_A Protein (phosphoglycerate mutase); transferase (phosphoryl); HET: 3PG; 1.70A {Saccharomyces cerevisiae} SCOP: c.60.1.1 PDB: 5pgm_D 1bq3_D* 1bq4_D 4pgm_A 3pgm_A*
Probab=100.00 E-value=8.5e-36 Score=273.20 Aligned_cols=181 Identities=24% Similarity=0.295 Sum_probs=157.4
Q ss_pred eeEEEeeccccccccCCcccC--CCCCCHhhHHHHHHHHHHHhcCCCCCcEEEecchHHHHHHHHhcC-------CCcee
Q psy9912 151 RTIYLTRHGESEHNLQGIIGG--DSSLSERGQLYSQALGKFIAQQDIPGLRIWTSWLKRTIQTVATCP-------APQER 221 (366)
Q Consensus 151 ~~I~LvRHGes~~n~~~~~~g--D~~LT~~G~~qA~~l~~~l~~~~~~~~~i~tSpl~Ra~qTA~~i~-------~~~~~ 221 (366)
++||||||||+.+|..++++| |.|||+.|++||+.++++|+..+..++.|||||+.||+|||+++. .++..
T Consensus 1 m~l~LvRHGet~~n~~~~~~G~~D~pLt~~G~~QA~~l~~~L~~~~~~~d~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~ 80 (240)
T 1qhf_A 1 PKLVLVRHGQSEWNEKNLFTGWVDVKLSAKGQQEAARAGELLKEKKVYPDVLYTSKLSRAIQTANIALEKADRLWIPVNR 80 (240)
T ss_dssp CEEEEEECCCBHHHHTTBCCTTSCCCBCHHHHHHHHHHHHHHHHTTCCCSEEEECSSHHHHHHHHHHHHHTTCTTSCEEE
T ss_pred CEEEEEECCCcccccCCcccCCCCCCcCHHHHHHHHHHHHHHHhcCCCcCEEEECCcHHHHHHHHHHHHhcCCCCCCeee
Confidence 489999999999999999988 999999999999999999998777788999999999999999972 47888
Q ss_pred eccccccccCccCCCCHHHHHhhCchHH-HhhhhCC------------------------CccCCCCCCCHHHHHHHHHH
Q psy9912 222 WKALNEIDAGICEEMTYEQIAEKYPDDF-SARDCAK------------------------FTYRYPRGESYEDLVARLEP 276 (366)
Q Consensus 222 ~~~L~E~~~G~~eg~~~~ei~~~~p~~~-~~~~~~~------------------------~~~~~p~gES~~d~~~R~~~ 276 (366)
++.|+|+++|.|+|++.+++.+.+|... ..|..+. ....+|+|||+.++..|+..
T Consensus 81 ~~~L~E~~~G~~eG~~~~ei~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gEs~~~~~~R~~~ 160 (240)
T 1qhf_A 81 SWRLNERHYGDLQGKDKAETLKKFGEEKFNTYRRSFDVPPPPIDASSPFSQKGDERYKYVDPNVLPETESLALVIDRLLP 160 (240)
T ss_dssp CGGGSCCCCGGGTTCBHHHHHHHHHHHHHHHHHHCSSCCCCCCCTTSTTCCTTCGGGTTSCGGGSCSSCCHHHHHHHHHH
T ss_pred CcccccccCCcccCCcHHHHHHHhhHHHHHHHhhccccCCccccccchhhcccchhhcccccCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999998653 3332110 01346899999999999999
Q ss_pred HHHH-HHc----CCeEEEEechHHHHHHHHHHhcCCCCCCCCcccCCceEEEEEEecCccE
Q psy9912 277 VIME-LER----QGNVLVVSHQAVLRCLLAYFLDKSADELPYLQVPLHTIIKLTPVAYGCK 332 (366)
Q Consensus 277 ~i~~-l~~----~~~vlIVsH~~~ir~l~~~~~~~~~~~~~~l~~~~~~v~~l~~~~~~~~ 332 (366)
++.+ +.. .++|||||||++|++++++++|.+.+.+..+.+|+++++.++++ .+|.
T Consensus 161 ~l~~~i~~~~~~~~~vlvVsHg~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~~-~~~~ 220 (240)
T 1qhf_A 161 YWQDVIAKDLLSGKTVMIAAHGNSLRGLVKHLEGISDADIAKLNIPTGIPLVFELD-ENLK 220 (240)
T ss_dssp HHHHTHHHHHHTTCCEEEEECHHHHHHHHHHHHTCCTTTGGGCCCCTTSCEEEEBC-TTSC
T ss_pred HHHHHHHhhccCCCEEEEEeCHHHHHHHHHHHhCCCHHHhhcccCCCCeeEEEEEc-CCCC
Confidence 9998 643 37899999999999999999999999888899999999999987 3444
No 15
>1rii_A 2,3-bisphosphoglycerate-dependent phosphoglycerat; phosphoglyerate mutase, SH3 domain binding, structural genom TBSGC; 1.70A {Mycobacterium tuberculosis} SCOP: c.60.1.1
Probab=100.00 E-value=7.7e-36 Score=277.63 Aligned_cols=179 Identities=28% Similarity=0.399 Sum_probs=156.5
Q ss_pred CeeEEEeeccccccccCCcccC--CCCCCHhhHHHHHHHHHHHhcCCCCCcEEEecchHHHHHHHHhcC-------CCce
Q psy9912 150 PRTIYLTRHGESEHNLQGIIGG--DSSLSERGQLYSQALGKFIAQQDIPGLRIWTSWLKRTIQTVATCP-------APQE 220 (366)
Q Consensus 150 ~~~I~LvRHGes~~n~~~~~~g--D~~LT~~G~~qA~~l~~~l~~~~~~~~~i~tSpl~Ra~qTA~~i~-------~~~~ 220 (366)
+++||||||||+.+|..++++| |.|||+.|++||+.+++.|+..++.++.|||||++||+|||+++. .++.
T Consensus 4 m~~l~LvRHGet~~N~~~~~~G~~D~pLt~~G~~QA~~l~~~L~~~~~~~d~i~sSpl~Ra~qTA~~i~~~~~~~~~~v~ 83 (265)
T 1rii_A 4 TGSLVLLRHGESDWNALNLFTGWVDVGLTDKGQAEAVRSGELIAEHDLLPDVLYTSLLRRAITTAHLALDSADRLWIPVR 83 (265)
T ss_dssp CCEEEEEECCCBHHHHTTBCCTTCCCCBCHHHHHHHHHHHHHHHHTTCCCSEEEECSCHHHHHHHHHHHHHTTCTTSCEE
T ss_pred ceEEEEEeCCCCcccccCCccCCCCCCcCHHHHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHHHHcCCCCCCee
Confidence 5799999999999999999998 999999999999999999998777888999999999999999972 5788
Q ss_pred eeccccccccCccCCCCHHHHHhhCchHH-HhhhhCC------------C------ccC----CCCCCCHHHHHHHHHHH
Q psy9912 221 RWKALNEIDAGICEEMTYEQIAEKYPDDF-SARDCAK------------F------TYR----YPRGESYEDLVARLEPV 277 (366)
Q Consensus 221 ~~~~L~E~~~G~~eg~~~~ei~~~~p~~~-~~~~~~~------------~------~~~----~p~gES~~d~~~R~~~~ 277 (366)
.++.|+|+++|.|+|++.+++.++||+.. ..|..+. + .|. .|+|||+.++..|+.++
T Consensus 84 ~~~~L~E~~~G~~eG~~~~ei~~~~~~~~~~~w~~~~~~~p~~~~~~~~~~~~~d~~~~~~~~~p~gEs~~~~~~Rv~~~ 163 (265)
T 1rii_A 84 RSWRLNERHYGALQGLDKAETKARYGEEQFMAWRRSYDTPPPPIERGSQFSQDADPRYADIGGGPLTECLADVVARFLPY 163 (265)
T ss_dssp ECGGGSCCCCGGGTTSBHHHHHHHHCHHHHHHHHHCSSCCCCCCCTTCTTCCTTCGGGGGGTTCCSCCCHHHHHHHHHHH
T ss_pred ECccccccccccccCCCHHHHHHHchHHHHHHHHhccccCCCccccccccccccchhhccCCCCCCCCCHHHHHHHHHHH
Confidence 89999999999999999999999999763 3332210 0 111 18999999999999999
Q ss_pred HHH-HHc----CCeEEEEechHHHHHHHHHHhcCCCCCCCCcccCCceEEEEEEec
Q psy9912 278 IME-LER----QGNVLVVSHQAVLRCLLAYFLDKSADELPYLQVPLHTIIKLTPVA 328 (366)
Q Consensus 278 i~~-l~~----~~~vlIVsH~~~ir~l~~~~~~~~~~~~~~l~~~~~~v~~l~~~~ 328 (366)
+.+ +.. .++|||||||++|+++++++++.+.+.+..+++|+++++.++++.
T Consensus 164 l~~~i~~~~~~~~~vlvVsHg~~ir~l~~~l~~~~~~~~~~~~i~~~~~~~~~~~~ 219 (265)
T 1rii_A 164 FTDVIVGDLRVGKTVLIVAHGNSLRALVKHLDQMSDDEIVGLNIPTGIPLRYDLDS 219 (265)
T ss_dssp HHHTHHHHHHTTCCEEEEECHHHHHHHHHHHTTCCHHHHHHCCCCSSCCEEEEBCT
T ss_pred HHHHHHHhccCCCeEEEEeChHHHHHHHHHHcCCCHHHHhhcCCCCCeEEEEEECC
Confidence 998 542 379999999999999999999998887888899999999999874
No 16
>4eo9_A 2,3-bisphosphoglycerate-dependent phosphoglycerat; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.45A {Mycobacterium leprae}
Probab=100.00 E-value=1.4e-35 Score=276.46 Aligned_cols=185 Identities=27% Similarity=0.356 Sum_probs=161.5
Q ss_pred CCeeEEEeeccccccccCCcccC--CCCCCHhhHHHHHHHHHHHhcCCCCCcEEEecchHHHHHHHHhcC-------CCc
Q psy9912 149 VPRTIYLTRHGESEHNLQGIIGG--DSSLSERGQLYSQALGKFIAQQDIPGLRIWTSWLKRTIQTVATCP-------APQ 219 (366)
Q Consensus 149 ~~~~I~LvRHGes~~n~~~~~~g--D~~LT~~G~~qA~~l~~~l~~~~~~~~~i~tSpl~Ra~qTA~~i~-------~~~ 219 (366)
++++||||||||+.+|..++++| |+|||+.|++||+.++++|+..+..++.|||||+.||+|||+++. .++
T Consensus 26 m~~~i~LvRHGet~~n~~~~~~G~~D~pLT~~G~~QA~~l~~~L~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~ 105 (268)
T 4eo9_A 26 NTATLILLRHGESDWNARNLFTGWVDVGLTDKGRAEAVRSGELLAEHNLLPDVLYTSLLRRAITTAHLALDTADWLWIPV 105 (268)
T ss_dssp CCEEEEEEECCCBHHHHTTCCCTTCCCCBCHHHHHHHHHHHHHHHHTTCCCSEEEECSSHHHHHHHHHHHHHTTCTTSCE
T ss_pred CceEEEEEECCccccccCCCccCCCCCCcCHHHHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHHHhcCCCCCCe
Confidence 46799999999999999999998 999999999999999999997777788999999999999999872 588
Q ss_pred eeeccccccccCccCCCCHHHHHhhCchH-HHhhhhCCC------------------cc----CCCCCCCHHHHHHHHHH
Q psy9912 220 ERWKALNEIDAGICEEMTYEQIAEKYPDD-FSARDCAKF------------------TY----RYPRGESYEDLVARLEP 276 (366)
Q Consensus 220 ~~~~~L~E~~~G~~eg~~~~ei~~~~p~~-~~~~~~~~~------------------~~----~~p~gES~~d~~~R~~~ 276 (366)
..++.|+|+++|.|+|++++++.+.+|+. +..|..+.. .| ++|+|||+.++..|+..
T Consensus 106 ~~~~~L~E~~~G~~eG~~~~ei~~~~p~~~~~~w~~~~~~~~p~~~~~~~~~~~~d~~~~~~~~~p~gEs~~~~~~Rv~~ 185 (268)
T 4eo9_A 106 RRSWRLNERHYGALQGLDKAVTKARYGEERFMAWRRSYDTPPPPIEKGSEFSQDADPRYTDIGGGPLTECLADVVTRFLP 185 (268)
T ss_dssp EECGGGSCCCCGGGTTCCHHHHHHHHCHHHHHHHHHCSSCCCCCCCTTSTTCCTTCGGGGGGTTCCSCCCHHHHHHHHHH
T ss_pred EECccccccccCCcCCCCHHHHHHHccHHHHHHhhcccccCCccccccccccccccccccccCCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999975 444443211 11 35899999999999999
Q ss_pred HHHHHH-----cCCeEEEEechHHHHHHHHHHhcCCCCCCCCcccCCceEEEEEEecCccEE
Q psy9912 277 VIMELE-----RQGNVLVVSHQAVLRCLLAYFLDKSADELPYLQVPLHTIIKLTPVAYGCKM 333 (366)
Q Consensus 277 ~i~~l~-----~~~~vlIVsH~~~ir~l~~~~~~~~~~~~~~l~~~~~~v~~l~~~~~~~~~ 333 (366)
++.++. ..++|||||||++|+++++++++.+.+.+..+.+++++++.+++++.+..+
T Consensus 186 ~l~~~i~~~~~~~~~vlvVsHg~~i~~l~~~l~g~~~~~~~~~~~~n~~i~~l~~~~~~~~~ 247 (268)
T 4eo9_A 186 YFTDVIVPDLRTGRTVLIVAHGNSLRALVKHLDEMSDDEVVGLNVPTGIPLRYDLDADLRPV 247 (268)
T ss_dssp HHHHTHHHHHHTTCCEEEEECHHHHHHHHHHHTTCCHHHHHTCCCCSSCCEEEEECTTSCBS
T ss_pred HHHHHHHHhccCCCEEEEEeCHHHHHHHHHHHhCCCHHHHhhccCCCCeEEEEEECCCCcEe
Confidence 988732 237999999999999999999999998888999999999999998765443
No 17
>1v37_A Phosphoglycerate mutase; riken structu genomics/proteomics initiative, RSGI, structural genomics,; 1.40A {Thermus thermophilus} SCOP: c.60.1.1 PDB: 1v7q_A 2hia_A 2pa0_A 2p2y_A 2p77_A 2p6m_A 2p9y_A 2p30_A 2ekz_A 2p9f_A 2p79_A 2p78_A 2p2z_A 2p75_A 2owe_A 2enu_A 2ekb_A 2p6o_A 2owd_A 2enw_A ...
Probab=100.00 E-value=7.1e-36 Score=261.56 Aligned_cols=164 Identities=21% Similarity=0.279 Sum_probs=149.9
Q ss_pred eeEEEeeccccccccCCcccC--CCCCCHhhHHHHHHHHHHHhcCCCCCcEEEecchHHHHHHHHhcCCCceeecccccc
Q psy9912 151 RTIYLTRHGESEHNLQGIIGG--DSSLSERGQLYSQALGKFIAQQDIPGLRIWTSWLKRTIQTVATCPAPQERWKALNEI 228 (366)
Q Consensus 151 ~~I~LvRHGes~~n~~~~~~g--D~~LT~~G~~qA~~l~~~l~~~~~~~~~i~tSpl~Ra~qTA~~i~~~~~~~~~L~E~ 228 (366)
|+||||||||+.+|..++++| |+|||+.|++||+.++++|+..+ |||||+.||+|||++++.++..++.|+|+
T Consensus 1 m~l~lvRHG~t~~n~~~~~~g~~d~pLt~~G~~qA~~l~~~l~~~~-----i~sSpl~Ra~qTA~~l~~~~~~~~~L~E~ 75 (177)
T 1v37_A 1 MELWLVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALPSLP-----AFSSDLLRARRTAELAGFSPRLYPELREI 75 (177)
T ss_dssp CEEEEEECCCCHHHHHTBCCSSCCCCCCHHHHHHHHHHTTTSCSCC-----EEECSSHHHHHHHHHTTCCCEECGGGSCC
T ss_pred CEEEEEeCCCCcccccCcccCCCCCCcCHHHHHHHHHHHHHhcCCC-----EEECCcHHHHHHHHHhCCCcEECccceeC
Confidence 479999999999999888888 99999999999999999997653 99999999999999998899999999999
Q ss_pred ccCccCCCCHHHHHhhCchHHHhhhhCCCccCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEEechHHHHHHHHHHhcCCC
Q psy9912 229 DAGICEEMTYEQIAEKYPDDFSARDCAKFTYRYPRGESYEDLVARLEPVIMELERQGNVLVVSHQAVLRCLLAYFLDKSA 308 (366)
Q Consensus 229 ~~G~~eg~~~~ei~~~~p~~~~~~~~~~~~~~~p~gES~~d~~~R~~~~i~~l~~~~~vlIVsH~~~ir~l~~~~~~~~~ 308 (366)
++|.|+|++.+++.+.+|+.+..| ..+.+|+|||+.++..|+..++.++ . ++|||||||++|+++++++++
T Consensus 76 ~~G~~eg~~~~e~~~~~~~~~~~~----~~~~~p~gEs~~~~~~R~~~~l~~l-~-~~vlvVsHg~~i~~l~~~l~~--- 146 (177)
T 1v37_A 76 HFGALEGALWETLDPRYKEALLRF----QGFHPPGGESLSAFQERVFRFLEGL-K-APAVLFTHGGVVRAVLRALGE--- 146 (177)
T ss_dssp CCGGGTTCBGGGSCHHHHHHHHTT----CSCCCTTSCCHHHHHHHHHHHHHHC-C-SCEEEEECHHHHHHHHHHTTS---
T ss_pred CCCcccCCCHHHHHHHCHHHHHHh----hcCCCCCCCCHHHHHHHHHHHHHHc-C-CCEEEEcCHHHHHHHHHHHcC---
Confidence 999999999999999999888766 4578899999999999999999999 6 899999999999999999998
Q ss_pred CCCCCcccCCceEEEEEEecCccE
Q psy9912 309 DELPYLQVPLHTIIKLTPVAYGCK 332 (366)
Q Consensus 309 ~~~~~l~~~~~~v~~l~~~~~~~~ 332 (366)
.+.+++++++.+++++.++.
T Consensus 147 ----~~~~~~~~i~~~~~~~~~~~ 166 (177)
T 1v37_A 147 ----DGLVPPGSAVAVDWPRRVLV 166 (177)
T ss_dssp ----CCCCCTTCEEEEETTTEEEE
T ss_pred ----CCCCCCCEEEEEEEeCCeeE
Confidence 35789999999998765554
No 18
>2qni_A AGR_C_517P, uncharacterized protein ATU0299; MCSG, in SITU proteolysis, structural genomics, PSI protein structure initiative; 1.80A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=1.6e-34 Score=261.46 Aligned_cols=176 Identities=14% Similarity=0.045 Sum_probs=149.6
Q ss_pred cCCCCCeeEEEeeccccccccCCcccCCCCCCHhhHHHHHHHHHHHhcCCCCCcEEEecchHHHHHHHHhcC----CCce
Q psy9912 145 NIHIVPRTIYLTRHGESEHNLQGIIGGDSSLSERGQLYSQALGKFIAQQDIPGLRIWTSWLKRTIQTVATCP----APQE 220 (366)
Q Consensus 145 n~~~~~~~I~LvRHGes~~n~~~~~~gD~~LT~~G~~qA~~l~~~l~~~~~~~~~i~tSpl~Ra~qTA~~i~----~~~~ 220 (366)
|+..++++||||||||+.+|..+++ .|.|||+.|++||+.++++|+... ++.|||||+.||+|||+++. .++.
T Consensus 16 ~~~~~mm~l~LvRHGet~~n~~~~~-~D~pLt~~G~~QA~~l~~~L~~~~--~d~i~sSpl~Ra~qTA~~i~~~~~~~~~ 92 (219)
T 2qni_A 16 NLYFQGMHALYITHPQVKIDPAVPV-PEWGLSERGAERAREASRLPWAKA--LRRIVSSAETKAIETAHMLAETSGAAIE 92 (219)
T ss_dssp -----CCEEEEEECCCBCCCSSSCG-GGCCBCHHHHHHHHHHHTSHHHHT--CCEEEECSSHHHHHHHHHHTTTTCCEEE
T ss_pred hhhhcCcEEEEEeCCCCcccccCcc-CCCCcCHHHHHHHHHHHHHHhcCC--CCEEEECCcHHHHHHHHHHHHhcCCCEE
Confidence 4445678999999999999988876 599999999999999999998764 45999999999999999983 4788
Q ss_pred eeccccccccCccCCCCHHHHHhhCchHHHhhhhCCCccCCCCCCCHHHHHHHHHHHHHHHHcC----CeEEEEechHHH
Q psy9912 221 RWKALNEIDAGICEEMTYEQIAEKYPDDFSARDCAKFTYRYPRGESYEDLVARLEPVIMELERQ----GNVLVVSHQAVL 296 (366)
Q Consensus 221 ~~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~~~~~~~~~~~p~gES~~d~~~R~~~~i~~l~~~----~~vlIVsH~~~i 296 (366)
.++.|+|+++|.|+|++.+++.+ .+..|..++. +.+|+|||+.++..|+..++.++... ++|||||||++|
T Consensus 93 ~~~~L~E~~~G~~eg~~~~~~~~----~~~~~~~~~~-~~~p~gEs~~~~~~Rv~~~l~~l~~~~~~~~~vlvVsHg~~i 167 (219)
T 2qni_A 93 IIEAMHENDRSATGFLPPPEFEK----AADWFFAHPE-ESFQGWERAIDAQARIVEAVKAVLDRHDARQPIAFVGHGGVG 167 (219)
T ss_dssp ECGGGCCCCCGGGCCCCHHHHHH----HHHHHHHCTT-SCSTTCCCHHHHHHHHHHHHHHHHHTCCTTSCEEEEECHHHH
T ss_pred ECcccccCCCccccCccHHHHHH----HHHHHHhCcc-cCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCeEEEEeCHHHH
Confidence 89999999999999999988754 4445555543 67899999999999999999998753 489999999999
Q ss_pred HHHHHHHhcCCCCCCCCcccCCceEEEEEEec
Q psy9912 297 RCLLAYFLDKSADELPYLQVPLHTIIKLTPVA 328 (366)
Q Consensus 297 r~l~~~~~~~~~~~~~~l~~~~~~v~~l~~~~ 328 (366)
+++++++++.+......+.++++++++|++..
T Consensus 168 ~~l~~~l~~~~~~~~~~~~~~n~si~~l~~~~ 199 (219)
T 2qni_A 168 TLLKCHIEGRGISRSKDQPAGGGNLFRFSIAE 199 (219)
T ss_dssp HHHHHHHHTCCCCCC--CCTTSCEEEEEEHHH
T ss_pred HHHHHHHhCcCHHHHhhccCCCeeEEEEEecC
Confidence 99999999999988888899999999998765
No 19
>3r7a_A Phosphoglycerate mutase, putative; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE EPE; 1.84A {Bacillus anthracis}
Probab=100.00 E-value=2.5e-34 Score=262.84 Aligned_cols=180 Identities=24% Similarity=0.260 Sum_probs=152.4
Q ss_pred CCCeeEEEeeccccccccCCcccC--CCCCCHhhHHHHHHHHHHHhcCCCCCcEEEecchHHHHHHHHhc-------CCC
Q psy9912 148 IVPRTIYLTRHGESEHNLQGIIGG--DSSLSERGQLYSQALGKFIAQQDIPGLRIWTSWLKRTIQTVATC-------PAP 218 (366)
Q Consensus 148 ~~~~~I~LvRHGes~~n~~~~~~g--D~~LT~~G~~qA~~l~~~l~~~~~~~~~i~tSpl~Ra~qTA~~i-------~~~ 218 (366)
..+++||||||||+.+|..++++| |+|||+.|++||+.++++|+. ..++.|||||+.||+|||+++ +.+
T Consensus 11 ~~~~~l~lvRHGet~~n~~~~~~G~~D~pLt~~G~~qA~~l~~~l~~--~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~ 88 (237)
T 3r7a_A 11 SNVVTLYVTRHGKTILNTNHRAQGWADSPLVEKGVEVATNLGTGLKD--IHFMNAYSSDSGRAIETANLVLKYSEQSKLK 88 (237)
T ss_dssp TCEEEEEEEECCCBHHHHTTBCCSSCCCCBCHHHHHHHHHHHHHTTT--SCEEEEEECSCHHHHHHHHHHHHHTTCTTSC
T ss_pred CCceEEEEEeCCcccccccccccCCCCCCcCHHHHHHHHHHHHHhcC--CCCCEEEECCcHHHHHHHHHHHHhcccCCCC
Confidence 456899999999999999999988 999999999999999999984 456699999999999999998 257
Q ss_pred ceeeccccccccCccCCCCHHHHHhhCchH--------HH--------hhhhCCCccCCCCCCCHHHHHHHHHHHHHHHH
Q psy9912 219 QERWKALNEIDAGICEEMTYEQIAEKYPDD--------FS--------ARDCAKFTYRYPRGESYEDLVARLEPVIMELE 282 (366)
Q Consensus 219 ~~~~~~L~E~~~G~~eg~~~~ei~~~~p~~--------~~--------~~~~~~~~~~~p~gES~~d~~~R~~~~i~~l~ 282 (366)
+..++.|+|+++|.|+|++.+++.+.+|.. +. .|... ...+|+|||+.++..|+..++.++.
T Consensus 89 ~~~~~~L~E~~~G~~eg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~gEs~~~~~~R~~~~l~~l~ 166 (237)
T 3r7a_A 89 LEQRKKLRELNFGIFEGEKLDNMWDAVGKAAGVTSPEELLKFSIQEVIDLIRA--ADPTKQAEDWELFSTRIKAEIDKIS 166 (237)
T ss_dssp EEECGGGCCCCCGGGTTSBHHHHHHHHHHHHTCSSGGGGGGSCHHHHHHHHHH--HCTTCCSCCHHHHHHHHHHHHHHHH
T ss_pred eeeCCCCcccCcchhcCCCHHHHHHHhhhhcCCCCHHHHHHhhhhhhhHHHhh--cCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 889999999999999999999998876432 21 11111 1256899999999999999999985
Q ss_pred c------CCeEEEEechHHHHHHHHHHhcCCCCCCCCcccCCceEEEEEEecCccEEEE
Q psy9912 283 R------QGNVLVVSHQAVLRCLLAYFLDKSADELPYLQVPLHTIIKLTPVAYGCKMEM 335 (366)
Q Consensus 283 ~------~~~vlIVsH~~~ir~l~~~~~~~~~~~~~~l~~~~~~v~~l~~~~~~~~~~~ 335 (366)
. .++|||||||++|+++++++++. ...+.+++++++.|.+.+.++.+..
T Consensus 167 ~~~~~~~~~~vlvVsHg~~i~~l~~~l~~~----~~~~~~~n~sv~~l~~~~~~~~l~~ 221 (237)
T 3r7a_A 167 EEAAKDGGGNVLVVVHGLLITTLIEMLDSS----KTKLGVENASVTKIVYQDGIYTVES 221 (237)
T ss_dssp HHHHHTTCEEEEEEECHHHHHHHHHHHHGG----GCCSCCCTTCEEEEEEETTEEEECC
T ss_pred HHhhcCCCCeEEEEcCHHHHHHHHHHhccc----cccCCCCCceEEEEEEECCEEEEEE
Confidence 3 37999999999999999999842 3567899999999999887766544
No 20
>3f3k_A Uncharacterized protein YKR043C; structural genomics,, PSI-2, prote structure initiative; 1.75A {Saccharomyces cerevisiae} PDB: 3lg2_A 3oi7_A* 3ll4_A*
Probab=100.00 E-value=8.3e-34 Score=263.89 Aligned_cols=187 Identities=20% Similarity=0.171 Sum_probs=153.9
Q ss_pred CCCeeEEEeeccccccccCCcccC--CCCCCHhhHHHHHHHHHHHhcCC-----CCCcEEEecchHHHHHHHHhcC----
Q psy9912 148 IVPRTIYLTRHGESEHNLQGIIGG--DSSLSERGQLYSQALGKFIAQQD-----IPGLRIWTSWLKRTIQTVATCP---- 216 (366)
Q Consensus 148 ~~~~~I~LvRHGes~~n~~~~~~g--D~~LT~~G~~qA~~l~~~l~~~~-----~~~~~i~tSpl~Ra~qTA~~i~---- 216 (366)
+++++||||||||+.+|..++++| |+|||+.|++||+.++++|+..+ ..++.|||||+.||+|||+++.
T Consensus 3 ~~~~~l~LvRHGet~~n~~~~~~G~~D~pLT~~G~~QA~~l~~~L~~~~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~ 82 (265)
T 3f3k_A 3 SLTPRCIIVRHGQTEWSKSGQYTGLTDLPLTPYGEGQMLRTGESVFRNNQFLNPDNITYIFTSPRLRARQTVDLVLKPLS 82 (265)
T ss_dssp CCCCEEEEEECCCCHHHHHTCCCSSCCCCCCHHHHHHHHHHHHHHHTC-CCSCGGGEEEEEECSSHHHHHHHHHHTTTSC
T ss_pred CCCcEEEEEECCCCccccccCccCCCCCCCCHHHHHHHHHHHHHHHhcccccCCCCCCEEEECCHHHHHHHHHHHHHhcc
Confidence 356899999999999999999988 99999999999999999998743 4567999999999999999983
Q ss_pred ------CCceeeccccccccCccCCCCHHHHHhhCchHHHhh--hhCCCccCCCCCCCHHHHHHHHHHHHHHHHc-----
Q psy9912 217 ------APQERWKALNEIDAGICEEMTYEQIAEKYPDDFSAR--DCAKFTYRYPRGESYEDLVARLEPVIMELER----- 283 (366)
Q Consensus 217 ------~~~~~~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~~--~~~~~~~~~p~gES~~d~~~R~~~~i~~l~~----- 283 (366)
.++..++.|+|+++|.|+|++.+++.+.+|...... ..+.+...+|+|||+.++..|+..++.++.+
T Consensus 83 ~~~~~~~~~~~~~~L~E~~~G~~eg~~~~ei~~~~~~~~~~~~~~~~~w~~~~p~gEs~~~~~~R~~~~l~~l~~~~~~~ 162 (265)
T 3f3k_A 83 DEQRAKIRVVVDDDLREWEYGDYEGMLTREIIELRKSRGLDKERPWNIWRDGCENGETTQQIGLRLSRAIARIQNLHRKH 162 (265)
T ss_dssp HHHHHTSEEEECGGGSCCCCGGGTTCCHHHHHHHHHHTTCCSSSCCCHHHHCCTTSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCeEEcCCceeeccCccCCCcHHHHHHHhhhccccccchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhhh
Confidence 467889999999999999999999999887532110 1112234578999999999999999999864
Q ss_pred -----CCeEEEEechHHHHHHHHHHhcCCC--------------------------------CCCCCcccCCceEEEEEE
Q psy9912 284 -----QGNVLVVSHQAVLRCLLAYFLDKSA--------------------------------DELPYLQVPLHTIIKLTP 326 (366)
Q Consensus 284 -----~~~vlIVsH~~~ir~l~~~~~~~~~--------------------------------~~~~~l~~~~~~v~~l~~ 326 (366)
.++|||||||++|++++++++|.++ ..-+.+.++.+++..|.+
T Consensus 163 ~~~~~~~~vliVsHg~~ir~l~~~l~g~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~~~~~~~~~~l~~g~~~vl~~ 242 (265)
T 3f3k_A 163 QSEGRASDIMVFAHGHALRYFAAIWFGLGVQKKCETIEEIQNVKSYDDDTVPYVKLESYRHLVDNPCFLLDAGGIGVLSY 242 (265)
T ss_dssp HHTTCCCEEEEEECHHHHHHHHHHHTTCSEEEECCSHHHHCCCCCCCCTTSCCCCCSEEEECSSCCCEECCTTCEEEEEE
T ss_pred hccCCCCcEEEEeChHHHHHHHHHHhCCCHHHhhhhhcCcccccccccccccccccccccccCCCcceeecCCceeeecc
Confidence 2789999999999999999999665 334566677788888877
Q ss_pred ecCccEEE
Q psy9912 327 VAYGCKME 334 (366)
Q Consensus 327 ~~~~~~~~ 334 (366)
...+....
T Consensus 243 ~~~~~~~~ 250 (265)
T 3f3k_A 243 AHHNIDEP 250 (265)
T ss_dssp STTCTTSE
T ss_pred cCCCcCch
Confidence 76555433
No 21
>3e9c_A ZGC:56074; histidine phosphatase, hydrolase; 2.00A {Danio rerio} PDB: 3e9d_A 3e9e_A
Probab=100.00 E-value=2.5e-33 Score=260.64 Aligned_cols=175 Identities=23% Similarity=0.308 Sum_probs=115.9
Q ss_pred CCCeeEEEeeccccccccCCcccC---CCCCCHhhHHHHHHHHHHHhcCCCCCcEEEecchHHHHHHHHhc--------C
Q psy9912 148 IVPRTIYLTRHGESEHNLQGIIGG---DSSLSERGQLYSQALGKFIAQQDIPGLRIWTSWLKRTIQTVATC--------P 216 (366)
Q Consensus 148 ~~~~~I~LvRHGes~~n~~~~~~g---D~~LT~~G~~qA~~l~~~l~~~~~~~~~i~tSpl~Ra~qTA~~i--------~ 216 (366)
|++++||||||||+.+|..++++| |+|||+.|++||+.++++|+.. .++.|||||+.||+|||+++ +
T Consensus 1 m~~~~l~LvRHGet~~n~~~~~~G~~~D~pLt~~G~~QA~~l~~~l~~~--~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~ 78 (265)
T 3e9c_A 1 MLTFALTIVRHGETQYNRDKLLQGQGIDTPLSDTGHQQAAAAGRYLKDL--HFTNVFVSNLQRAIQTAEIILGNNLHSSA 78 (265)
T ss_dssp CEEEEEEEEECCCC-------------CCCCCHHHHHHHHHHHHHTTTC--CCSEEEECSSHHHHHHHHHHHHTCSSCTT
T ss_pred CcccEEEEEeCCCccccccCcccCCCCCCCcCHHHHHHHHHHHHHHhcC--CCCEEEECCcHHHHHHHHHHHHhccccCC
Confidence 356899999999999999998887 9999999999999999999865 45699999999999999997 3
Q ss_pred CCceeeccccccccCccCCCCHHHHHhhCchHHHhhhhCCCccCCCCCCCHHHHHHHHHHHHHHHHc-------------
Q psy9912 217 APQERWKALNEIDAGICEEMTYEQIAEKYPDDFSARDCAKFTYRYPRGESYEDLVARLEPVIMELER------------- 283 (366)
Q Consensus 217 ~~~~~~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~~~~~~~~~~~p~gES~~d~~~R~~~~i~~l~~------------- 283 (366)
.++..++.|+|+++|.|+|++++++.+.++. +..++..+++|+|||+.++..|+..++.++..
T Consensus 79 ~~v~~~~~L~E~~~G~~eg~~~~ei~~~~~~----~~~~~~~~~~p~gEs~~~~~~R~~~~l~~l~~~~~~e~~~~~~~~ 154 (265)
T 3e9c_A 79 TEMILDPLLRERGFGVAEGRPKEHLKNMANA----AGQSCRDYTPPGGETLEQVKTRFKMFLKSLFQRMFEEHGSALSSV 154 (265)
T ss_dssp CCEEECGGGSCCCCC---------------------------------CCHHHHHHHHHHHHHHHHHHHHHHHCSSSCC-
T ss_pred CCeEECccceeCcCCCCCCCCHHHHHHHHHH----hccCCccCCCCCCCCHHHHHHHHHHHHHHHHHHhhhhhhhccccc
Confidence 4789999999999999999999999887664 33345568899999999999999999998854
Q ss_pred --------------------CCeEEEEechHHHHHHHHHHhcCCCCCCC-------Cccc-CCceEEEEEEec
Q psy9912 284 --------------------QGNVLVVSHQAVLRCLLAYFLDKSADELP-------YLQV-PLHTIIKLTPVA 328 (366)
Q Consensus 284 --------------------~~~vlIVsH~~~ir~l~~~~~~~~~~~~~-------~l~~-~~~~v~~l~~~~ 328 (366)
.++|||||||++|+++++++++......| .+.+ ++++++.+....
T Consensus 155 ~~~~~~p~~~~~~e~~~~~~~~~vlvVsHg~~i~~ll~~ll~~~~~~~p~~~~~~~~~~v~~n~sit~~~~~~ 227 (265)
T 3e9c_A 155 PSEADQPVIAGLADDGAQNVPVHALMVSHGAFIRISVRHLVEDLQCCLPAGLKMNQVFSPCPNTGISRFIFTI 227 (265)
T ss_dssp ---CCCCCCCSSTTTTCTTCCCEEEEEECHHHHHHHHHHHHHTSCEEECTTCCHHHHTSCCCTTCEEEEEEEE
T ss_pred ccccccccccccccccccCCCCeEEEEeCHHHHHHHHHHHHcccccccccchhHHhcccCCCCCeeEEEEEEE
Confidence 25899999999999999999953221121 2334 899998888766
No 22
>3dcy_A Regulator protein; OMIM 610775, C12ORF5, tigar, TP53-induced glycolysis and apoptosis regulator, CAsp target, structural genomics medical relevance; HET: MSE; 1.75A {Homo sapiens}
Probab=100.00 E-value=1.6e-33 Score=263.33 Aligned_cols=176 Identities=26% Similarity=0.263 Sum_probs=151.5
Q ss_pred CCCCCeeEEEeeccccccccCCcccC---CCCCCHhhHHHHHHHHHHHhcCCCCCcEEEecchHHHHHHHHhc-------
Q psy9912 146 IHIVPRTIYLTRHGESEHNLQGIIGG---DSSLSERGQLYSQALGKFIAQQDIPGLRIWTSWLKRTIQTVATC------- 215 (366)
Q Consensus 146 ~~~~~~~I~LvRHGes~~n~~~~~~g---D~~LT~~G~~qA~~l~~~l~~~~~~~~~i~tSpl~Ra~qTA~~i------- 215 (366)
+++.+++||||||||+.+|..++++| |+|||+.|++||+.++++|+.. .++.|||||+.||+|||+.+
T Consensus 4 ~~~~~~~i~LvRHGet~~n~~~~~~G~~~D~~Lt~~G~~QA~~l~~~l~~~--~~~~v~sSpl~Ra~qTA~~i~~~~~~~ 81 (275)
T 3dcy_A 4 FQSARFALTVVRHGETRFNKEKIIQGQGVDEPLSETGFKQAAAAGIFLNNV--KFTHAFSSDLMRTKQTMHGILERSKFC 81 (275)
T ss_dssp ECCEEEEEEEEECCCBHHHHHTBCCSSSSCCCBCHHHHHHHHHHHHHTTTC--CCSEEEECSSHHHHHHHHHHHTTCSSC
T ss_pred ccccCcEEEEEeCCCcccccCCccCCCCCCCCcCHHHHHHHHHHHHHhccC--CCCEEEECChHHHHHHHHHHHHhcccc
Confidence 45678999999999999999998877 9999999999999999999865 45599999999999999997
Q ss_pred -CCCceeeccccccccCccCCCCHHHHHhhCchHHHhhhhCCCccCCCCCCCHHHHHHHHHHHHHHHHc-----------
Q psy9912 216 -PAPQERWKALNEIDAGICEEMTYEQIAEKYPDDFSARDCAKFTYRYPRGESYEDLVARLEPVIMELER----------- 283 (366)
Q Consensus 216 -~~~~~~~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~~~~~~~~~~~p~gES~~d~~~R~~~~i~~l~~----------- 283 (366)
+.++..++.|+|+++|.|+|++.+++.+.+|. +..++..+++|+|||+.++..|+..++.++.+
T Consensus 82 ~~~~v~~~~~L~E~~~G~~eg~~~~ei~~~~~~----~~~~~~~~~~p~gEs~~~~~~R~~~~l~~l~~~~~~~~~~~~~ 157 (275)
T 3dcy_A 82 KDMTVKYDSRLRERKYGVVEGKALSELRAMAKA----AREECPVFTPPGGETLDQVKMRGIDFFEFLCQLILKEADQKEQ 157 (275)
T ss_dssp TTCCEEECGGGSCCCBGGGTTSBHHHHHHHHHH----TTCCTTTCCCTTBCCHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred CCCCeeECcccccCccCCcCCCCHHHHHHHHHH----HhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhhhhccc
Confidence 34788999999999999999999999987653 44556678999999999999999999998765
Q ss_pred -------------------------------------CCeEEEEechHHHHHHHHHHh---------cCCCCCCCCcccC
Q psy9912 284 -------------------------------------QGNVLVVSHQAVLRCLLAYFL---------DKSADELPYLQVP 317 (366)
Q Consensus 284 -------------------------------------~~~vlIVsH~~~ir~l~~~~~---------~~~~~~~~~l~~~ 317 (366)
.++|||||||++|++++.+|+ +.+.+++..++++
T Consensus 158 ~~~~~p~~~l~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~VlvVsHg~~ir~l~~~l~~~~~~~lp~~l~~~~i~~~~~~ 237 (275)
T 3dcy_A 158 FSQGSPSNCLETSLAEIFPLGKNHSSKVNSDSGIPGLAASVLVVSHGAYMRSLFDYFLTDLKCSLPATLSRSELMSVTPN 237 (275)
T ss_dssp -------CHHHHHHHTTSCC-------------CCCCSCEEEEEECHHHHHHHHHHHHHTTCCBCCTTCCHHHHHSCCCT
T ss_pred cccccchHHHHHHHHhhccccccccchhcccccccCCCceEEEEechHHHHHHHHHHHhhcCCCCCCCCCHHHhcCcCCC
Confidence 348999999999999999999 7777767667776
Q ss_pred CceE-EEEEEe
Q psy9912 318 LHTI-IKLTPV 327 (366)
Q Consensus 318 ~~~v-~~l~~~ 327 (366)
.+-. +.+++.
T Consensus 238 tgi~~~~~~~~ 248 (275)
T 3dcy_A 238 TGMSLFIINFE 248 (275)
T ss_dssp TCEEEEEEEEC
T ss_pred CCCeeEEEEEc
Confidence 6644 555553
No 23
>3d4i_A STS-2 protein; PGM, 2H-phosphatase, PTP, SH3 domain, hydrolase; 1.95A {Mus musculus} PDB: 3d6a_A 3db1_A
Probab=100.00 E-value=1.2e-32 Score=256.94 Aligned_cols=185 Identities=20% Similarity=0.207 Sum_probs=154.8
Q ss_pred CCCCCeeEEEeeccccccc------------cCC------------------cccC---CCCCCHhhHHHHHHHHHHHhc
Q psy9912 146 IHIVPRTIYLTRHGESEHN------------LQG------------------IIGG---DSSLSERGQLYSQALGKFIAQ 192 (366)
Q Consensus 146 ~~~~~~~I~LvRHGes~~n------------~~~------------------~~~g---D~~LT~~G~~qA~~l~~~l~~ 192 (366)
..+++++||||||||+.+| ..+ +++| |+|||+.|++||+.++++|+.
T Consensus 5 ~~~~~~~l~lvRHGet~~n~~~~~w~~~~~n~~~~y~~~d~n~p~~~~~r~~~~~G~~~D~pLt~~G~~QA~~l~~~L~~ 84 (273)
T 3d4i_A 5 ATISRRGILVIRHGERVDQVFGKSWLQQCTTADGKYYRPDLNFPRSLPRRSNGIKDFENDPPLSSCGIFQARLAGEALLD 84 (273)
T ss_dssp TTSCCCEEEEEECCCBHHHHHCTTHHHHTBCTTSCBCCSSTTSCSCCCCCTTGGGGGGGSCCBCHHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEEeCccccccccchhHHHhhhccccccccccccCCcccccccCCCcCCCCCCCcCHHHHHHHHHHHHHHHh
Confidence 3456789999999999985 232 2444 899999999999999999997
Q ss_pred CCCCCcEEEecchHHHHHHHHhc----C----CCceeeccccc-cccCccCC----CCHHHHHhhCch---HHHhhhhCC
Q psy9912 193 QDIPGLRIWTSWLKRTIQTVATC----P----APQERWKALNE-IDAGICEE----MTYEQIAEKYPD---DFSARDCAK 256 (366)
Q Consensus 193 ~~~~~~~i~tSpl~Ra~qTA~~i----~----~~~~~~~~L~E-~~~G~~eg----~~~~ei~~~~p~---~~~~~~~~~ 256 (366)
.+..++.|||||+.||+|||+++ + .++..++.|+| +++|.|+| ++.+++.+.+|. .+..|..+
T Consensus 85 ~~~~~d~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~L~E~~~~g~~eg~~~~~~~~el~~~~~~~~~~~~~~~~~- 163 (273)
T 3d4i_A 85 SGVRVTAVFASPALRCVQTAKHILEELKLEKKLKIRVEPGIFEWMKWEASKATLTFLTLEELKEANFNVDLDYRPALPR- 163 (273)
T ss_dssp HTCCEEEEEECSSHHHHHHHHHHHHHHTCTTTSCEEECGGGSCCGGGSCTTGGGGSCCHHHHHHTTCCBCTTCCCSSCG-
T ss_pred cCCCCCEEEECchHHHHHHHHHHHHHcCcCCCccEEEChhhhhhhhccccccCCCCCCHHHHHHhCCCCCcccccccCC-
Confidence 77778899999999999999998 3 47889999999 99999999 689999988774 33333221
Q ss_pred CccCCCCCCCHHHHHHHHHHHHHHHHc-----CCeEEEEechHHHHHHHHHHhcCCCCCCCCc-----ccCCceEEEEEE
Q psy9912 257 FTYRYPRGESYEDLVARLEPVIMELER-----QGNVLVVSHQAVLRCLLAYFLDKSADELPYL-----QVPLHTIIKLTP 326 (366)
Q Consensus 257 ~~~~~p~gES~~d~~~R~~~~i~~l~~-----~~~vlIVsH~~~ir~l~~~~~~~~~~~~~~l-----~~~~~~v~~l~~ 326 (366)
..+|+|||+.++..|+..++.++.. .++|||||||++|+++++++++.+......+ .+++++++.|++
T Consensus 164 --~~~p~gEs~~~~~~R~~~~l~~l~~~~~~~~~~vlvVsHg~~i~~l~~~l~~~~~~~~~~~~~~~~~~~n~si~~l~~ 241 (273)
T 3d4i_A 164 --CSLMPAESYDQYVERCAVSMGQIINTCPQDMGITLIVSHSSALDSCTRPLLGLPPRECGDFAQLVRKIPSLGMCFCEE 241 (273)
T ss_dssp --GGCCTTCCHHHHHHHHHHHHHHHHTTSTTCCSEEEEEECTTHHHHTTHHHHTCCCCCHHHHHHHHHTCCTTCEEEEEE
T ss_pred --CcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCEEEEEechHHHHHHHHHHcCCCcchHHHHhhhccccCcceEEEEEE
Confidence 3578999999999999999999864 2789999999999999999999998877666 799999999999
Q ss_pred ec--CccEE
Q psy9912 327 VA--YGCKM 333 (366)
Q Consensus 327 ~~--~~~~~ 333 (366)
.. .+|.+
T Consensus 242 ~~~~~~w~l 250 (273)
T 3d4i_A 242 NREDGKWDL 250 (273)
T ss_dssp CTTTCCEEE
T ss_pred cCCCCceeE
Confidence 76 34444
No 24
>3c7t_A Ecdysteroid-phosphate phosphatase; ecdysone, 2H-phosphatase, PGM, hydrolase; 1.76A {Bombyx mori}
Probab=99.98 E-value=7.8e-32 Score=250.19 Aligned_cols=181 Identities=17% Similarity=0.171 Sum_probs=149.2
Q ss_pred CCeeEEEeecccccc----------------------------ccCCcccC---CCCCCHhhHHHHHHHHHHHhcCCCCC
Q psy9912 149 VPRTIYLTRHGESEH----------------------------NLQGIIGG---DSSLSERGQLYSQALGKFIAQQDIPG 197 (366)
Q Consensus 149 ~~~~I~LvRHGes~~----------------------------n~~~~~~g---D~~LT~~G~~qA~~l~~~l~~~~~~~ 197 (366)
.+++||||||||+.+ |..++++| |+|||+.|++||+.++++|+..+..+
T Consensus 3 ~~~~l~lvRHGet~~n~~~~w~~~~~~~~~y~~~d~n~p~~~pn~~~~~~g~~~D~pLt~~G~~QA~~l~~~L~~~~~~~ 82 (263)
T 3c7t_A 3 SRRWVFALRHGERVDLTYGPWVPHCFENDTYVRKDLNLPLKLAHRAGGKGGYVKDTPLTRLGWFQAQLVGEGMRMAGVSI 82 (263)
T ss_dssp -CEEEEEEECCCBHHHHSSSHHHHHEETTEECCCSTTSCSCCCCCTTHHHHHHHSCCBCHHHHHHHHHHHHHHHHTTCCC
T ss_pred CceEEEEEeCCccccccchhhHhhhhccCccccccccCCccccccccCcccCCCCCCcCHHHHHHHHHHHHHHHHCCCCC
Confidence 568999999999998 44566654 99999999999999999999766778
Q ss_pred cEEEecchHHHHHHHHhc----C----CCceeeccccc-cccCcc---CCCCHHHHHhhCchHHHhhhhCCCccCCCCCC
Q psy9912 198 LRIWTSWLKRTIQTVATC----P----APQERWKALNE-IDAGIC---EEMTYEQIAEKYPDDFSARDCAKFTYRYPRGE 265 (366)
Q Consensus 198 ~~i~tSpl~Ra~qTA~~i----~----~~~~~~~~L~E-~~~G~~---eg~~~~ei~~~~p~~~~~~~~~~~~~~~p~gE 265 (366)
+.|||||+.||+|||+++ + .++..++.|+| +++|.| +|++.+++.+.+|.....+. . +....|+||
T Consensus 83 d~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~L~E~~~~g~~~G~eg~~~~e~~~~~~~~~~~~~-~-~~~~~p~gE 160 (263)
T 3c7t_A 83 KHVYASPALRCVETAQGFLDGLRADPSVKIKVEPGLFEFKNWHMPKGIDFMTPIELCKAGLNVDMTYK-P-YVEMDASAE 160 (263)
T ss_dssp CEEEECSSHHHHHHHHHHHHHHTCCTTCCEEECGGGCCCCCTTSCCCCCCCCHHHHHHTTCCBCTTCC-C-SCCCCSSCC
T ss_pred CEEEECCcHHHHHHHHHHHHHcCcCCCCceEeccccccccccccccccccCCHHHHHHhcCCcccccc-c-cccCCCCCC
Confidence 899999999999999997 3 57889999999 997555 88999999988875321111 1 112238999
Q ss_pred CHHHHHHHHHHHHHHHHc-----CCeEEEEechHHHHHHHHHHhcCCCCCCC-------Cc--ccCCceEEEEEEecCcc
Q psy9912 266 SYEDLVARLEPVIMELER-----QGNVLVVSHQAVLRCLLAYFLDKSADELP-------YL--QVPLHTIIKLTPVAYGC 331 (366)
Q Consensus 266 S~~d~~~R~~~~i~~l~~-----~~~vlIVsH~~~ir~l~~~~~~~~~~~~~-------~l--~~~~~~v~~l~~~~~~~ 331 (366)
|+.++..|+..++.++.. .++|||||||++|+++++++++.+..... .+ .+++++++.|++.. |
T Consensus 161 s~~~~~~Rv~~~l~~l~~~~~~~~~~vlvVsHg~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~n~si~~l~~~~--w 238 (263)
T 3c7t_A 161 TMDEFFKRGEVAMQAAVNDTEKDGGNVIFIGHAITLDQMVGALHRLRDDMEDVQPYEIGRNLLKVPYCALGAMRGKP--W 238 (263)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTTTTCCEEEEECHHHHHHHHHHHHTTCSSCCSCCCCCTTSSSSCCCTTCEEEEEETT--T
T ss_pred CHHHHHHHHHHHHHHHHHHhccCCCeEEEEeCHHHHHHHHHHHhCCCchhhcccHHHHHHhcccCCcceehhecccC--c
Confidence 999999999999999863 37899999999999999999999887654 44 89999999999864 5
Q ss_pred EE
Q psy9912 332 KM 333 (366)
Q Consensus 332 ~~ 333 (366)
..
T Consensus 239 ~~ 240 (263)
T 3c7t_A 239 DV 240 (263)
T ss_dssp EE
T ss_pred eE
Confidence 44
No 25
>3mbk_A Ubiquitin-associated and SH3 domain-containing PR; PGM, STS-1, signaling protein, low PH, alternative splicing, cytoplasm, nucleus, phosphoprotein; 1.35A {Mus musculus} PDB: 2ikq_A 2h0q_A
Probab=99.97 E-value=2.4e-31 Score=247.02 Aligned_cols=171 Identities=15% Similarity=0.100 Sum_probs=144.7
Q ss_pred CCCCCCHhhHHHHHHHHHHHhcCCCCCcEEEecchHHHHHHHHhc----C----CCceeeccccccccCccCC-------
Q psy9912 171 GDSSLSERGQLYSQALGKFIAQQDIPGLRIWTSWLKRTIQTVATC----P----APQERWKALNEIDAGICEE------- 235 (366)
Q Consensus 171 gD~~LT~~G~~qA~~l~~~l~~~~~~~~~i~tSpl~Ra~qTA~~i----~----~~~~~~~~L~E~~~G~~eg------- 235 (366)
.|+|||+.|++||+.++++|++.+..++.|||||+.||+|||+++ + .++..++.|+| +|.|+|
T Consensus 54 ~D~pLT~~G~~QA~~l~~~L~~~~~~~d~v~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~L~E--~g~~eg~~~~~~~ 131 (264)
T 3mbk_A 54 KDAPITVFGCMQARLVGEALLESNTVIDHVYCSPSLRCVQTAHNILKGLQQDNHLKIRVEPGLFE--WTKWVAGSTLPAW 131 (264)
T ss_dssp TSCCBCHHHHHHHHHHHHHHHHTTCCCCEEEECSSHHHHHHHHHHHHHHTCTTTCCBEECGGGSC--CGGGSSSSSCCCC
T ss_pred CCCCCChHHHHHHHHHHHHHHHcCCCcCEEEECcHHHHHHHHHHHHHHhcccCCCCeeEcCChHH--HhhhccccCCCCC
Confidence 399999999999999999999877788899999999999999997 2 27889999999 689999
Q ss_pred CCHHHHHhhCchHHHhhhhCCCccCCCCCCCHHHHHHHHHHHHHHHHc-----CCeEEEEechHHHHHHHHHHhcCCCCC
Q psy9912 236 MTYEQIAEKYPDDFSARDCAKFTYRYPRGESYEDLVARLEPVIMELER-----QGNVLVVSHQAVLRCLLAYFLDKSADE 310 (366)
Q Consensus 236 ~~~~ei~~~~p~~~~~~~~~~~~~~~p~gES~~d~~~R~~~~i~~l~~-----~~~vlIVsH~~~ir~l~~~~~~~~~~~ 310 (366)
++.+++.+.+|.....|..+.....+|+|||+.++..|+..++.++.. .++|||||||++|++++++++|.+.+.
T Consensus 132 ~~~~e~~~~~~~~~~~~~~~~~~~~~p~gEs~~~~~~R~~~~l~~l~~~~~~~~~~vlvVsHg~~i~~l~~~l~g~~~~~ 211 (264)
T 3mbk_A 132 IPPSELAAANLSVDTTYRPHIPVSKLAISESYDTYINRSFQVTKEIISECKSKGNNILIVAHASSLEACTCQLQGLSPQN 211 (264)
T ss_dssp CCHHHHHHTTCCBCTTCCCSSCGGGCCTTCCHHHHHHHHHHHHHHHHHHHTTSCSEEEEEECTTHHHHTTTGGGTCCCCC
T ss_pred CCHHHHHHhCCCcchhhccccCcccCCCCCCHHHHHHHHHHHHHHHHHhccCCCCeEEEEecHHHHHHHHHHHcCCCHHH
Confidence 589999999998777777766678889999999999999999999864 279999999999999999999999988
Q ss_pred CCCcc-----cCCceEEEEEEecCccEEEEEeeCCCCC
Q psy9912 311 LPYLQ-----VPLHTIIKLTPVAYGCKMEMIKLPIDAV 343 (366)
Q Consensus 311 ~~~l~-----~~~~~v~~l~~~~~~~~~~~~~~~~~~~ 343 (366)
+..+. +|.+++..++............-+...+
T Consensus 212 ~~~~~~~~~~~p~~~~~~~~~~~~~g~W~l~~~~~~~l 249 (264)
T 3mbk_A 212 SKDFVQMVRKIPYLGFCSCEELGETGIWQLTDPPILPL 249 (264)
T ss_dssp HHHHHHHHTTCCTTCEEEEEECSSSCCEEEECCSSCCC
T ss_pred HHHHHHhccCCCchHHHHhhhhccCCcEEeCCCCCCCc
Confidence 76665 8899988888654333344444344443
No 26
>3mxo_A Serine/threonine-protein phosphatase PGAM5, mitoc; phosphoglycerate mutase family member 5, BXLBV68, MGC protein, structural genomics consortium; HET: PG4 PGE PEG; 1.70A {Homo sapiens} PDB: 3o0t_A
Probab=99.96 E-value=4.3e-29 Score=222.75 Aligned_cols=169 Identities=20% Similarity=0.218 Sum_probs=136.4
Q ss_pred CCCCeeEEEeeccccccccCCcccCCCCCCHhhHHHHHHHHHHHhcCCCCCcEEEecchHHHHHHHHhc-----CCCcee
Q psy9912 147 HIVPRTIYLTRHGESEHNLQGIIGGDSSLSERGQLYSQALGKFIAQQDIPGLRIWTSWLKRTIQTVATC-----PAPQER 221 (366)
Q Consensus 147 ~~~~~~I~LvRHGes~~n~~~~~~gD~~LT~~G~~qA~~l~~~l~~~~~~~~~i~tSpl~Ra~qTA~~i-----~~~~~~ 221 (366)
.+++++|||||||| +|..+++..|+|||+.|++||+.+++.|+..+.+++.|||||+.||+|||+.+ +.++..
T Consensus 7 ~~~~~~i~lvRHGe--~n~~g~~~~D~pLt~~G~~qA~~l~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~ 84 (202)
T 3mxo_A 7 AKATRHIFLIRHSQ--YHVDGSLEKDRTLTPLGREQAELTGLRLASLGLKFNKIVHSSMTRAIETTDIISRHLPGVCKVS 84 (202)
T ss_dssp CSSCEEEEEEECCC--BCTTCSSGGGCCBCHHHHHHHHHHHHHHHTTCCCCSEEEEESSHHHHHHHHHHHHTSTTCCEEE
T ss_pred CCCceEEEEEeCcc--ccCCCCCCCCCCcCHHHHHHHHHHHHHHHhcCCCCCEEEECChHHHHHHHHHHHHhCCCCCeee
Confidence 35678999999999 47777776799999999999999999999876778899999999999999998 347888
Q ss_pred eccccccccCccCCCCHHHHHhhCchHHHhhhhCCCccCCCCCCCHHHHHHHHHHHHHHHHcC--------CeEEEEech
Q psy9912 222 WKALNEIDAGICEEMTYEQIAEKYPDDFSARDCAKFTYRYPRGESYEDLVARLEPVIMELERQ--------GNVLVVSHQ 293 (366)
Q Consensus 222 ~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~~~~~~~~~~~p~gES~~d~~~R~~~~i~~l~~~--------~~vlIVsH~ 293 (366)
++.|+| |+++++. +| +..| .+++|++.++..|+..++.++... ++|||||||
T Consensus 85 ~~~L~E-------g~~~~~~---~~--~~~w--------~~~~es~~~~~~R~~~~~~~~~~~~~~~~~~~~~vlvVsHg 144 (202)
T 3mxo_A 85 TDLLRE-------GAPIEPD---PP--VSHW--------KPEAVQYYEDGARIEAAFRNYIHRADARQEEDSYEIFICHA 144 (202)
T ss_dssp EGGGCC-------CCC---------------------------CTHHHHHHHHHHHHHHHTTCCCTTCCSCEEEEEEECH
T ss_pred Cccccc-------CCccCCC---Cc--HHhh--------ccCCcccccHHHHHHHHHHHHHHhhhhccCCCceEEEEeCH
Confidence 999998 4444321 11 1111 257899999999999999998753 479999999
Q ss_pred HHHHHHHHHHhcCCCCCCCCcccCCceEEEEEEecC-ccEEEEEe
Q psy9912 294 AVLRCLLAYFLDKSADELPYLQVPLHTIIKLTPVAY-GCKMEMIK 337 (366)
Q Consensus 294 ~~ir~l~~~~~~~~~~~~~~l~~~~~~v~~l~~~~~-~~~~~~~~ 337 (366)
++|++++++++|.+...+..+.+++++++.|++.+. .+.+..++
T Consensus 145 ~~ir~ll~~llg~~~~~~~~~~~~n~si~~l~~~~~g~~~l~~~N 189 (202)
T 3mxo_A 145 NVIRYIVCRALQFPPEGWLRLSLNNGSITHLVIRPNGRVALRTLG 189 (202)
T ss_dssp HHHHHHHHHHTTCCGGGGGGBCCCTTCEEEEEECTTSCEEEEEEE
T ss_pred HHHHHHHHHHhCCCHHHHhhcccCCceEEEEEEcCCCcEEEEEeC
Confidence 999999999999999999999999999999999864 45666654
No 27
>3eoz_A Putative phosphoglycerate mutase; PGAM, malaria, structural genomics, isomerase, structural GE consortium, SGC; 2.40A {Plasmodium falciparum}
Probab=99.96 E-value=4.8e-30 Score=231.18 Aligned_cols=167 Identities=19% Similarity=0.114 Sum_probs=113.5
Q ss_pred CCCeeEEEeeccccccccCCcccCCCCCCHhhHHHHHHHHHHHhcC--CCCCcEEEecchHHHHHHHHhc-----CCCce
Q psy9912 148 IVPRTIYLTRHGESEHNLQGIIGGDSSLSERGQLYSQALGKFIAQQ--DIPGLRIWTSWLKRTIQTVATC-----PAPQE 220 (366)
Q Consensus 148 ~~~~~I~LvRHGes~~n~~~~~~gD~~LT~~G~~qA~~l~~~l~~~--~~~~~~i~tSpl~Ra~qTA~~i-----~~~~~ 220 (366)
.++++||||||||+.+|..+ -..|+|||+.|++||+.++++|+.. +..++.|||||+.||+|||+.+ +.++.
T Consensus 19 ~~~~~i~LvRHGet~~n~~~-g~~d~pLt~~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~ 97 (214)
T 3eoz_A 19 NTTKHIILVRHGQYERRYKD-DENSKRLTKEGCKQADITGKKLKDILNNKKVSVIYHSDMIRAKETANIISKYFPDANLI 97 (214)
T ss_dssp CCEEEEEEEECC----------------CHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSHHHHHHHHHHHTTCTTSEEE
T ss_pred CCccEEEEEeCCccccCccC-CcCCCCcCHHHHHHHHHHHHHHHHhcccCCCCEEEECCcHHHHHHHHHHHHHCCCCCee
Confidence 56789999999999999875 1229999999999999999999875 4467799999999999999998 34678
Q ss_pred eeccccccccCccCCCCHHHHHhhCchHHHhhhhCCCccCCCCCCCHHHHHHHHHHHHHHHHcC------CeEEEEechH
Q psy9912 221 RWKALNEIDAGICEEMTYEQIAEKYPDDFSARDCAKFTYRYPRGESYEDLVARLEPVIMELERQ------GNVLVVSHQA 294 (366)
Q Consensus 221 ~~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~~~~~~~~~~~p~gES~~d~~~R~~~~i~~l~~~------~~vlIVsH~~ 294 (366)
.++.|+| |+++.+. ..| ....|+|||+.++..|+..++.++... ++|||||||+
T Consensus 98 ~~~~L~E-------G~~~~~~--~~~-----------~~~~~~gEs~~~~~~R~~~~l~~l~~~~~~~~~~~vlvVsHg~ 157 (214)
T 3eoz_A 98 NDPNLNE-------GTPYLPD--PLP-----------RHSKFDAQKIKEDNKRINKAYETYFYKPSGDEDEYQLVICHGN 157 (214)
T ss_dssp ECGGGCC-------CC-----------------------------------CCHHHHHHHHCSCCCSSCCEEEEEEECHH
T ss_pred eCccccC-------CCCCCCC--CCc-----------ccCCCCCccHHHHHHHHHHHHHHHHHhcccCCCcEEEEEeCcH
Confidence 8899998 5554321 011 112368999999999999999999654 2799999999
Q ss_pred HHHHHHHHHhcCCCCCCCCcccCCceEEEEEEecCc-cEEEE
Q psy9912 295 VLRCLLAYFLDKSADELPYLQVPLHTIIKLTPVAYG-CKMEM 335 (366)
Q Consensus 295 ~ir~l~~~~~~~~~~~~~~l~~~~~~v~~l~~~~~~-~~~~~ 335 (366)
+|++++++++|.+.+.+..+.+++++++.|++.+.+ +.+..
T Consensus 158 ~i~~ll~~llg~~~~~~~~~~~~n~si~~l~~~~~g~~~l~~ 199 (214)
T 3eoz_A 158 VIRYFLCRALQIPLFAWLRFSSYNCGITWLVLDDEGSVVLRE 199 (214)
T ss_dssp HHHHHHHHHHTCCHHHHHHHTTCCCSEEEEEEETTSCEEEEC
T ss_pred HHHHHHHHHhCCCHHHHhhcCCCCceEEEEEECCCCCEEEEE
Confidence 999999999999988877888999999999998754 44443
No 28
>1ujc_A Phosphohistidine phosphatase SIXA; alpha-beta fold, hydrolase; 1.90A {Escherichia coli} PDB: 1ujb_A
Probab=99.94 E-value=1.7e-25 Score=192.54 Aligned_cols=147 Identities=17% Similarity=0.182 Sum_probs=112.8
Q ss_pred eeEEEeeccccccccCCcccCCCCCCHhhHHHHHHHHHHHhcCCCCCcEEEecchHHHHHHHHhcCCCceeecccccccc
Q psy9912 151 RTIYLTRHGESEHNLQGIIGGDSSLSERGQLYSQALGKFIAQQDIPGLRIWTSWLKRTIQTVATCPAPQERWKALNEIDA 230 (366)
Q Consensus 151 ~~I~LvRHGes~~n~~~~~~gD~~LT~~G~~qA~~l~~~l~~~~~~~~~i~tSpl~Ra~qTA~~i~~~~~~~~~L~E~~~ 230 (366)
|+||||||||+++|..+ ..|.|||+.|++||+.++++|+..+..++.|||||+.||+|||+++.........+
T Consensus 1 m~l~LvRHg~t~~n~~g--~~d~pLt~~G~~qA~~l~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~----- 73 (161)
T 1ujc_A 1 MQVFIMRHGDAALDAAS--DSVRPLTTNGCDESRLMANWLKGQKVEIERVLVSPFLRAEQTLEEVGDCLNLPSSA----- 73 (161)
T ss_dssp CEEEEEECCCBCSCSSS--GGGCCBCHHHHHHHHHHHHHHHHTTCCCCEEEECSSHHHHHHHHHHHHHSCCCSCC-----
T ss_pred CEEEEEeCCCcCCCCCC--CCcCCcCHHHHHHHHHHHHHHHhcCCCCCEEEeCchHHHHHHHHHHHHhcCCCceE-----
Confidence 47999999999999753 23999999999999999999998777788999999999999999884211100000
Q ss_pred CccCCCCHHHHHhhCchHHHhhhhCCCccCCCCCCCHHHHHHHHHHHHHHHHc--CCeEEEEechHHHHHHHHHHhcCCC
Q psy9912 231 GICEEMTYEQIAEKYPDDFSARDCAKFTYRYPRGESYEDLVARLEPVIMELER--QGNVLVVSHQAVLRCLLAYFLDKSA 308 (366)
Q Consensus 231 G~~eg~~~~ei~~~~p~~~~~~~~~~~~~~~p~gES~~d~~~R~~~~i~~l~~--~~~vlIVsH~~~ir~l~~~~~~~~~ 308 (366)
..|++ -+|+|| + .|+..++.++.. .++|||||||++|+++++++++.+.
T Consensus 74 ~~~~~------------------------l~p~ge-~----~r~~~~l~~~~~~~~~~vlvV~H~~~i~~l~~~l~~~~~ 124 (161)
T 1ujc_A 74 EVLPE------------------------LTPCGD-V----GLVSAYLQALTNEGVASVLVISHLPLVGYLVAELCPGET 124 (161)
T ss_dssp EECGG------------------------GSTTCC-H----HHHHHHHHHHHHHTCCEEEEEECTTHHHHHHHHHSTTCC
T ss_pred EecCC------------------------cCCCCC-H----HHHHHHHHHHhccCCCeEEEEeCHHHHHHHHHHHhCCCC
Confidence 11211 147788 4 466666666543 3799999999999999999999876
Q ss_pred CCCCCcccCCceEEEEEEe-cCccEEEEEe
Q psy9912 309 DELPYLQVPLHTIIKLTPV-AYGCKMEMIK 337 (366)
Q Consensus 309 ~~~~~l~~~~~~v~~l~~~-~~~~~~~~~~ 337 (366)
. +.+++++++.++++ ..++.+..+.
T Consensus 125 ~----~~~~~~~i~~l~~~~~~~~~l~~~~ 150 (161)
T 1ujc_A 125 P----PMFTTSAIASVTLDESGNGTFNWQM 150 (161)
T ss_dssp C----CCCCTTCEEEEEECTTSCEEEEEEE
T ss_pred c----cccCCCeEEEEEEcCCCCeEEEEee
Confidence 6 67899999999998 5566665554
No 29
>2rfl_A Putative phosphohistidine phosphatase SIXA; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=5.4e-25 Score=191.59 Aligned_cols=136 Identities=19% Similarity=0.220 Sum_probs=100.3
Q ss_pred CeeEEEeeccccccccCCcccC--CCCCCHhhHHHHHHHHHHHhcCCCCCcEEEecchHHHHHHHHhcC----CC--cee
Q psy9912 150 PRTIYLTRHGESEHNLQGIIGG--DSSLSERGQLYSQALGKFIAQQDIPGLRIWTSWLKRTIQTVATCP----AP--QER 221 (366)
Q Consensus 150 ~~~I~LvRHGes~~n~~~~~~g--D~~LT~~G~~qA~~l~~~l~~~~~~~~~i~tSpl~Ra~qTA~~i~----~~--~~~ 221 (366)
|++||||||||+.+|..+ +| |.|||+.|++||+.++++|+..+..++.|||||+.||+|||+++. .+ +..
T Consensus 8 M~~l~LvRHg~t~~n~~~--~g~~d~pLt~~G~~qa~~l~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~ 85 (173)
T 2rfl_A 8 PTRVYLLRHAKAAWAAPG--ERDFDRGLNEAGFAEAEIIADLAADRRYRPDLILSSTAARCRQTTQAWQRAFNEGIDIVY 85 (173)
T ss_dssp CCEEEEEECCCBCC-------CGGGCCBCHHHHHHHHHHHHHHHHHTCCCSEEEECSSHHHHHHHHHHHHHHC--CEEEE
T ss_pred ccEEEEEeCCCcCCCCCC--CCcccCCcCHHHHHHHHHHHHHHHhCCCCCCEEEECCHHHHHHHHHHHHHhcCCCCCeEE
Confidence 579999999999999866 34 999999999999999999997766778999999999999999983 22 344
Q ss_pred eccccccccCccCCCCHHHHHhhCchHHHhhhhCCCccCCCCCCCHHHHHHHHHHHHHHHHc-CCeEEEEechHHHHHHH
Q psy9912 222 WKALNEIDAGICEEMTYEQIAEKYPDDFSARDCAKFTYRYPRGESYEDLVARLEPVIMELER-QGNVLVVSHQAVLRCLL 300 (366)
Q Consensus 222 ~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~~~~~~~~~~~p~gES~~d~~~R~~~~i~~l~~-~~~vlIVsH~~~ir~l~ 300 (366)
++.|.|.+ .|++.++ + ++.. .++||||||+++|++++
T Consensus 86 ~~~l~e~~----------------------------------~e~~~~~-------l-~~~~~~~~vlvVsH~~~i~~l~ 123 (173)
T 2rfl_A 86 IDEMYNAR----------------------------------SETYLSL-------I-AAQTEVQSVMLVGHNPTMEATL 123 (173)
T ss_dssp CGGGSSCS----------------------------------SSCSHHH-------H-HTCTTCSEEEEEECTTHHHHHH
T ss_pred CHhHhcCC----------------------------------HHHHHHH-------H-hCCCCCCeEEEEeCCHHHHHHH
Confidence 45544421 2455443 2 3322 37899999999999999
Q ss_pred HHHhcCCCCC-CCCcccCCceEEEEEEecC
Q psy9912 301 AYFLDKSADE-LPYLQVPLHTIIKLTPVAY 329 (366)
Q Consensus 301 ~~~~~~~~~~-~~~l~~~~~~v~~l~~~~~ 329 (366)
+++++.+... ...+.+++++++.+++...
T Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~ 153 (173)
T 2rfl_A 124 EAMIGEDLLHAALPSGFPTSGLAVLDQDDS 153 (173)
T ss_dssp HHHHCHHHHHHHCTTCCCTTCEEEEEC---
T ss_pred HHHhCCCcchhhhhcCCCCCeEEEEEecCh
Confidence 9999976431 1346789999999998653
No 30
>3f2i_A ALR0221 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG, function; 2.00A {Nostoc SP}
Probab=99.86 E-value=3.1e-21 Score=167.58 Aligned_cols=143 Identities=20% Similarity=0.117 Sum_probs=104.4
Q ss_pred eeEEEeeccccccccCCcccCCCCCCHhhHHHHHHHHHHHhcCCCCCcEEEecchHHHHHHHHhcCCCceeecccccccc
Q psy9912 151 RTIYLTRHGESEHNLQGIIGGDSSLSERGQLYSQALGKFIAQQDIPGLRIWTSWLKRTIQTVATCPAPQERWKALNEIDA 230 (366)
Q Consensus 151 ~~I~LvRHGes~~n~~~~~~gD~~LT~~G~~qA~~l~~~l~~~~~~~~~i~tSpl~Ra~qTA~~i~~~~~~~~~L~E~~~ 230 (366)
|+|||||||++++|..+....|.|||++|++||+.++++|+..++.++.|||||+.||+|||+.+... .....+.+.
T Consensus 1 M~l~LvRHg~a~~~~~~~~d~d~pLt~~G~~qA~~~~~~L~~~~~~~~~i~sSp~~Ra~qTa~~l~~~-~~~~~~~~~-- 77 (172)
T 3f2i_A 1 MELYLIRHGIAEAQKTGIKDEERELTQEGKQKTEKVAYRLVKLGRQFDLIVTSPLIRARQTAEILLAS-GLSCQLEES-- 77 (172)
T ss_dssp CEEEEEECCCBCCC---CCGGGCCBCHHHHHHHHHHHHHHHHTTCCCSEEEECSSHHHHHHHHHHHHT-TSCSCEEEC--
T ss_pred CEEEEEcCCCcCccccCCCCCCCCcCHHHHHHHHHHHHHHHhcCCCCCEEEECChHHHHHHHHHHHhc-CCCCCeEEC--
Confidence 58999999999998665433499999999999999999999988888899999999999999988432 101111110
Q ss_pred CccCCCCHHHHHhhCchHHHhhhhCCCccCCCCCCCHHHHHHHHHHHHHHHHcC-CeEEEEechHHHHHHHHHHhcCCCC
Q psy9912 231 GICEEMTYEQIAEKYPDDFSARDCAKFTYRYPRGESYEDLVARLEPVIMELERQ-GNVLVVSHQAVLRCLLAYFLDKSAD 309 (366)
Q Consensus 231 G~~eg~~~~ei~~~~p~~~~~~~~~~~~~~~p~gES~~d~~~R~~~~i~~l~~~-~~vlIVsH~~~ir~l~~~~~~~~~~ 309 (366)
+. -+ .+++..++..++..+. .... ++++||||++++..++.++.+.+..
T Consensus 78 ---~~------------------------L~-~~~~~~~~~~~l~~~~--~~~~~~~vllVgH~P~l~~l~~~L~~~~~~ 127 (172)
T 3f2i_A 78 ---NH------------------------LA-PNGNIFNWLDYWLKPK--NFPENAQIAIVGHEPCLSNWTEILLWGEAK 127 (172)
T ss_dssp ---GG------------------------GS-TTCCHHHHHHHTHHHH--CCCTTCEEEEEECTTHHHHHHHHHHHSSCC
T ss_pred ---cc------------------------cC-CccCHHHHHHHHHHhc--cCCCCCEEEEEeCChHHHHHHHHHhcCCcc
Confidence 00 00 2345555555554432 1122 7999999999999999999987654
Q ss_pred CCCCcccCCceEEEEEEec
Q psy9912 310 ELPYLQVPLHTIIKLTPVA 328 (366)
Q Consensus 310 ~~~~l~~~~~~v~~l~~~~ 328 (366)
..+.+|.+++..|++..
T Consensus 128 --~~~~~~t~~i~~l~~~~ 144 (172)
T 3f2i_A 128 --DSLVLKKAGMIGLKLPE 144 (172)
T ss_dssp --CCBCCCTTCEEEEECCS
T ss_pred --cccccCCceEEEEEeCC
Confidence 34689999999999864
No 31
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.84 E-value=2.3e-20 Score=180.95 Aligned_cols=159 Identities=17% Similarity=0.132 Sum_probs=116.7
Q ss_pred hhcCCCCCeeEEEeeccccccccCCccc-CCCCCCHhhHHHHHHHHHHHhcCCCCCcEEEecchHHHHHHHHhc----CC
Q psy9912 143 LMNIHIVPRTIYLTRHGESEHNLQGIIG-GDSSLSERGQLYSQALGKFIAQQDIPGLRIWTSWLKRTIQTVATC----PA 217 (366)
Q Consensus 143 l~n~~~~~~~I~LvRHGes~~n~~~~~~-gD~~LT~~G~~qA~~l~~~l~~~~~~~~~i~tSpl~Ra~qTA~~i----~~ 217 (366)
+-+-...+++|||||||++.++.....+ .|.|||+.|++||+.++++|+.. .++.|||||+.||+|||+++ +.
T Consensus 175 l~~g~~~~~~l~lvRHg~~~~~~~~~~~~~d~pLt~~G~~qa~~~~~~l~~~--~~d~i~sSp~~Ra~~Ta~~~~~~~~~ 252 (364)
T 3fjy_A 175 VQEGAATAQNLLIVRHAKAESRKSWKGTDANRPITPKGAAMAFALNRELACF--NPTRLATSPWLRCQETLQVLSWQTER 252 (364)
T ss_dssp HHTTGGGCEEEEEEECCCBCCTTTCCSCSTTCCBCHHHHHHHHHHHHHHGGG--CEEEEEECSSHHHHHHHHHHHHHHTC
T ss_pred hccCCCcceeEEEEeccccccccccCCCcCcCCCCHHHHHHHHHHHHHhccC--CCCEEEEcChHHHHHHHHHHHHhcCC
Confidence 3333456789999999999977542212 28899999999999999999864 56799999999999999987 45
Q ss_pred CceeeccccccccCccCCCCHHHHHhhCchHHHhhhhCCCccCCCCCCCHHHHHHHHHHHHHHHHc-CCeEEEEechHHH
Q psy9912 218 PQERWKALNEIDAGICEEMTYEQIAEKYPDDFSARDCAKFTYRYPRGESYEDLVARLEPVIMELER-QGNVLVVSHQAVL 296 (366)
Q Consensus 218 ~~~~~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~~~~~~~~~~~p~gES~~d~~~R~~~~i~~l~~-~~~vlIVsH~~~i 296 (366)
++...+.|+|..++ ++..++..|+...+.++.. .++|||||||++|
T Consensus 253 ~~~~~~~l~e~~~~---------------------------------~~~~~~~~~~~~~~~~~~~~~~~vlvV~H~~~i 299 (364)
T 3fjy_A 253 PMEHINTLTEDAFA---------------------------------EHPAVSWLAFREQITQTLNSRETTAICMHRPVI 299 (364)
T ss_dssp CEEECGGGSHHHHH---------------------------------HCHHHHHHHHHHHHHHHHHHTCEEEEEECHHHH
T ss_pred CeEECcccCccccc---------------------------------cCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHH
Confidence 67777778775332 2445666777777777654 3899999999999
Q ss_pred HHHHHHHhcCCCCC-CC------CcccCCceEEEEEEe--cCccEEEEE
Q psy9912 297 RCLLAYFLDKSADE-LP------YLQVPLHTIIKLTPV--AYGCKMEMI 336 (366)
Q Consensus 297 r~l~~~~~~~~~~~-~~------~l~~~~~~v~~l~~~--~~~~~~~~~ 336 (366)
++|+.++.|.+... +. ...+|++++..+++. ..++.+..+
T Consensus 300 ~~l~~~l~g~~~~~~~~~~~~~~~~~~pt~~~~v~~~~~~~~~~~v~~~ 348 (364)
T 3fjy_A 300 GGMYDHLRGLCARKQLAKQLIAKSPYMPTGTAMSLFIIDTPQGPSIIDI 348 (364)
T ss_dssp HHHHHHHGGGSSSHHHHHHCCSSTTTSCTTCEEEEEEEEETTEEEEEEE
T ss_pred HHHHHHHhCCCchHHHHHhccccCcccCCCcEEEEEEcCCCCCCeEEEE
Confidence 99999999977321 11 112677776666665 445444333
No 32
>4hbz_A Putative phosphohistidine phosphatase, SIXA; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, HP_PGM_LIKE; HET: PGE; 1.55A {Nakamurella multipartita}
Probab=99.77 E-value=2.8e-18 Score=150.74 Aligned_cols=136 Identities=18% Similarity=0.154 Sum_probs=98.7
Q ss_pred CCeeEEEeeccccccccCCcccCCCCCCHhhHHHHHHHHHHHhcCCCCCcEEEecchHHHHHHHHhcCCCce--eecccc
Q psy9912 149 VPRTIYLTRHGESEHNLQGIIGGDSSLSERGQLYSQALGKFIAQQDIPGLRIWTSWLKRTIQTVATCPAPQE--RWKALN 226 (366)
Q Consensus 149 ~~~~I~LvRHGes~~n~~~~~~gD~~LT~~G~~qA~~l~~~l~~~~~~~~~i~tSpl~Ra~qTA~~i~~~~~--~~~~L~ 226 (366)
.+++|||+|||+++++.. ..|.|||++|++||+.++++|+..++.++.|||||+.||+|||+.++.... ..+.|.
T Consensus 18 ~~k~L~L~RHaka~~~~~---D~dRpLt~~G~~~a~~~~~~l~~~~~~~d~i~~Spa~Ra~qTa~~~~~~~~~~~~~~ly 94 (186)
T 4hbz_A 18 GARTLVLMRHAAAGSAVR---DHDRPLTPDGVRAATAAGQWLRGHLPAVDVVVCSTAARTRQTLAATGISAQVRYRDELY 94 (186)
T ss_dssp CCEEEEEEECCCBCCCSS---GGGCCBCHHHHHHHHHHHHHHHHHSCCCCEEEEESSHHHHHHHHHHTCCSEEEEEGGGT
T ss_pred CCcEEEEEECCccCCCCC---CCCCCCCHHHHHHHHHhhhHhhhcccCCCccccCcchhHHHHHHhhccccccccccccc
Confidence 568999999999998643 228999999999999999999999999999999999999999998864322 221111
Q ss_pred ccccCccCCCCHHHHHhhCchHHHhhhhCCCccCCCCCCCHHHHHHHHHHHHHHHHcC-CeEEEEechHHHHHHHHHHhc
Q psy9912 227 EIDAGICEEMTYEQIAEKYPDDFSARDCAKFTYRYPRGESYEDLVARLEPVIMELERQ-GNVLVVSHQAVLRCLLAYFLD 305 (366)
Q Consensus 227 E~~~G~~eg~~~~ei~~~~p~~~~~~~~~~~~~~~p~gES~~d~~~R~~~~i~~l~~~-~~vlIVsH~~~ir~l~~~~~~ 305 (366)
+ .+..++ ...+.++... ++++||+|.+.+..+..++.+
T Consensus 95 ~-------------------------------------~~~~~~----l~~i~~~~~~~~~vllvGHnP~l~~l~~~L~~ 133 (186)
T 4hbz_A 95 G-------------------------------------GGVDEI----LAEVAAVPADASTVLVVGHAPTIPATGWELVR 133 (186)
T ss_dssp T-------------------------------------CCHHHH----HHHHHTSCTTCSEEEEEECTTHHHHHHHHHHH
T ss_pred c-------------------------------------cChHHH----HHHHHhccCCCCeeeecccCCCHHHHHHHHhc
Confidence 1 011122 2333443333 789999999999999999876
Q ss_pred CCCC----------CCCCcccCCceEEEEEEec
Q psy9912 306 KSAD----------ELPYLQVPLHTIIKLTPVA 328 (366)
Q Consensus 306 ~~~~----------~~~~l~~~~~~v~~l~~~~ 328 (366)
.... ......+|.+++..|.+..
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~fpTa~~avl~~~~ 166 (186)
T 4hbz_A 134 QSLLNRDADPSSGAGDELRHFAAGTFAVLSTTG 166 (186)
T ss_dssp HHHHHTTCCTTCCTTGGGGCCCTTCEEEEEESS
T ss_pred cccccccchhhhhhHhhhcCCCCeEEEEEECCC
Confidence 3211 1112348899999998853
No 33
>3u3g_D Ribonuclease H, RNAse H1; hydrolase, cleave the RNA strand of RNA/DNA hybrid; 1.40A {Uncultured organism}
Probab=98.19 E-value=3.4e-07 Score=75.40 Aligned_cols=94 Identities=16% Similarity=0.149 Sum_probs=74.3
Q ss_pred EEeCCCchHHHHHHHHHH-HHhhcCCe--EEEEEEEeCCHHHHHHhHHHHhcCCCCCCCCCHHHHHHHH-HHHHHhHHhh
Q psy9912 27 VFDATNSTIDRRKMIHEM-VVDKMGYK--LFFVESVCDDPSIIEQNIMEVKVNSPDYQDMNREAALQDF-LQRIMHYEER 102 (366)
Q Consensus 27 i~daTN~t~e~r~~i~~~-~~~~~~~~--~~~iE~~~d~~~vi~~ni~~~k~~~pdy~~~~~e~a~~~~-~~r~~~~~~~ 102 (366)
+..+||+.+|+.+++..+ .+.+.+++ ..-|.+..||+.|+++..+.|+++++++..+-.+ +.++ .+++..++..
T Consensus 40 ~~~~tn~~aEl~A~~~aL~~a~~~~~~~~~~~v~i~tDS~~vi~~i~~~~~~~~~~l~~~~~~--i~~l~~~~~~~v~~~ 117 (140)
T 3u3g_D 40 IGETTNNVAEYEALIRALEDLQMFGDKLVDMEVEVRMDSELIVRQMQGVYKVKEPTLKEKFAK--IAHIKMERVPNLVFV 117 (140)
T ss_dssp EEEECHHHHHHHHHHHHHHHHGGGGGGGTTCEEEEEESCHHHHHHHTTSSCCCCGGGHHHHHH--HHHHHHHHCTTCEEE
T ss_pred CCCCchHHHHHHHHHHHHHHHHHcCCCCCCceEEEEeChHHHHHHhCCCcccCCHHHHHHHHH--HHHHhhcCCCcEEEE
Confidence 357899999999999976 35565653 0147899999999999998888888887654333 3466 7777789999
Q ss_pred ceeCchhhHHhhhhHhhhcc
Q psy9912 103 YEALNEESEAALSFMRIYNT 122 (366)
Q Consensus 103 y~p~~~~~~~~~~~ik~id~ 122 (366)
|+|++.|+.+|.++.++++.
T Consensus 118 ~V~~~~N~~AD~LA~~a~~~ 137 (140)
T 3u3g_D 118 HIPREKNARADELVNEAIDK 137 (140)
T ss_dssp ECCGGGGHHHHHHHHHHHHH
T ss_pred EcCchhhHHHHHHHHHHHHh
Confidence 99999999999999888753
No 34
>3hst_B Protein RV2228C/MT2287; ribonuclease H1, RV2228C N-terminal domain, fusion protein, maltose binding protein, HYDR; HET: MLR TAR; 2.25A {Mycobacterium tuberculosis}
Probab=98.12 E-value=2.2e-07 Score=76.81 Aligned_cols=91 Identities=18% Similarity=0.145 Sum_probs=72.4
Q ss_pred EeCCCchHHHHHHHHHH-HHhhcCCeEEEEEEEeCCHHHHHHhHHHHhcCCCCCCCCCHHHHHHHHHHHHHhHHhhceeC
Q psy9912 28 FDATNSTIDRRKMIHEM-VVDKMGYKLFFVESVCDDPSIIEQNIMEVKVNSPDYQDMNREAALQDFLQRIMHYEERYEAL 106 (366)
Q Consensus 28 ~daTN~t~e~r~~i~~~-~~~~~~~~~~~iE~~~d~~~vi~~ni~~~k~~~pdy~~~~~e~a~~~~~~r~~~~~~~y~p~ 106 (366)
...||+.+|+.+++..+ .+.+.+++. |.+.+||+.|+++..+.|+++++++..+-.+ +.++.+++..++..|+|+
T Consensus 42 ~~~tn~~aEl~A~~~aL~~a~~~~~~~--v~i~tDS~~vv~~i~~~~~~~~~~l~~~~~~--i~~l~~~~~~v~~~~V~~ 117 (141)
T 3hst_B 42 GRATNNVAEYRGLIAGLDDAVKLGATE--AAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQ--AQALASQFRRINYEWVPR 117 (141)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHHTCSE--EEEEESCHHHHHHHTTSSCCCSHHHHHHHHH--HHHHHTTSSEEEEEECCG
T ss_pred CCCchHHHHHHHHHHHHHHHHHCCCce--EEEEeChHHHHHHHhCCcccCCHHHHHHHHH--HHHHHhcCCeEEEEEcCC
Confidence 47899999999999876 466667643 8899999999999998888888776543222 245556667788999999
Q ss_pred chhhHHhhhhHhhhcc
Q psy9912 107 NEESEAALSFMRIYNT 122 (366)
Q Consensus 107 ~~~~~~~~~~ik~id~ 122 (366)
+.|+.+|.+..++++.
T Consensus 118 ~~N~~AD~LA~~a~~~ 133 (141)
T 3hst_B 118 ARNTYADRLANDAMDA 133 (141)
T ss_dssp GGCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHH
Confidence 9999999999988764
No 35
>2ehg_A Ribonuclease HI; RNAse HI, hyperthermophilic archaeon, D stranded RNA-dependent RNAse, hydrolase; 1.60A {Sulfolobus tokodaii} PDB: 3aly_A
Probab=97.99 E-value=1.2e-06 Score=73.30 Aligned_cols=89 Identities=17% Similarity=0.134 Sum_probs=71.3
Q ss_pred eCCCchHHHHHHHHHH-HHhhcCCeEEEEEEEeCCHHHHHHhHHHHhcCCCCCCCCCHHHHHHHHHHHHHhHHhhceeCc
Q psy9912 29 DATNSTIDRRKMIHEM-VVDKMGYKLFFVESVCDDPSIIEQNIMEVKVNSPDYQDMNREAALQDFLQRIMHYEERYEALN 107 (366)
Q Consensus 29 daTN~t~e~r~~i~~~-~~~~~~~~~~~iE~~~d~~~vi~~ni~~~k~~~pdy~~~~~e~a~~~~~~r~~~~~~~y~p~~ 107 (366)
.+||+.+|+.+++..+ .+.+.+++ -|++..||+.|+++..+.|+.++|.++.+-.+ +..+.+++ .++..|+|++
T Consensus 45 ~~tnn~aEl~A~~~aL~~a~~~g~~--~v~i~tDS~~vi~~i~~~w~~~~~~~~~l~~~--i~~l~~~~-~v~~~~V~~~ 119 (149)
T 2ehg_A 45 NSTNNVAEYSGLICLMETMLRLGIS--SPIIKGDSQLVIKQMNGEYKVKAKRIIPLYEK--AIELKKKL-NATLIWVPRE 119 (149)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHTCC--SCEEEESCHHHHHHHTTSSCCCCTTHHHHHHH--HHHHHHHH-TCEEEECCGG
T ss_pred CccHHHHHHHHHHHHHHHHHHcCCC--EEEEEeChHHHHHHHhCccccCCHHHHHHHHH--HHHHHhcC-CEEEEEcCCc
Confidence 7899999999999876 46666664 37899999999999998888888765544333 34667777 4899999999
Q ss_pred hhhHHhhhhHhhhcc
Q psy9912 108 EESEAALSFMRIYNT 122 (366)
Q Consensus 108 ~~~~~~~~~ik~id~ 122 (366)
.|+.+|.++.++++.
T Consensus 120 ~N~~AD~LA~~a~~~ 134 (149)
T 2ehg_A 120 ENKEADRLSRVAYEL 134 (149)
T ss_dssp GCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHh
Confidence 999999999988753
No 36
>2qkb_A Ribonuclease H1, HS-RNAse HC, RNAse H1; RNA/DNA hybrid; 2.40A {Homo sapiens} PDB: 2qk9_A 2qkk_A*
Probab=96.08 E-value=0.0034 Score=52.37 Aligned_cols=89 Identities=12% Similarity=-0.014 Sum_probs=57.9
Q ss_pred eCCCchHHHHHHHHHH-HHhhcCCeEEEEEEEeCCHHHHHHhHHH---H-----hcCCCCCCCC-CHH--HHHHHHHHHH
Q psy9912 29 DATNSTIDRRKMIHEM-VVDKMGYKLFFVESVCDDPSIIEQNIME---V-----KVNSPDYQDM-NRE--AALQDFLQRI 96 (366)
Q Consensus 29 daTN~t~e~r~~i~~~-~~~~~~~~~~~iE~~~d~~~vi~~ni~~---~-----k~~~pdy~~~-~~e--~a~~~~~~r~ 96 (366)
..||+.+|..+++..+ .+.+.+.. -|.+++||+.||++.... | +.++. ... ..+ ..+..+.+++
T Consensus 47 ~~tn~~aEl~A~~~aL~~~~~~~~~--~v~i~tDS~~vi~~i~~~~~~w~~~~w~~~~~--~~~~n~~l~~~i~~l~~~~ 122 (154)
T 2qkb_A 47 RQTNQRAEIHAACKAIEQAKTQNIN--KLVLYTNSMFTINGITNWVQGWKKNGWKTSAG--KEVINKEDFVALERLTQGM 122 (154)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHTTCC--EEEEEESCHHHHHHHHTHHHHHHTTTSBCTTS--SBCTTHHHHHHHHHHHTTC
T ss_pred CCchHHHHHHHHHHHHHHHHhCCCc--eEEEEECcHHHHhhhhhhHHHHHhccccccCC--CccccHHHHHHHHHHHcCC
Confidence 5799999999999876 35555553 488999999999887652 2 22211 011 111 1122333333
Q ss_pred HhHHhhceeC----chhhHHhhhhHhhhcc
Q psy9912 97 MHYEERYEAL----NEESEAALSFMRIYNT 122 (366)
Q Consensus 97 ~~~~~~y~p~----~~~~~~~~~~ik~id~ 122 (366)
.++..|+|. ..|+.+|.++.++++.
T Consensus 123 -~v~~~~V~~H~g~~~N~~AD~LA~~a~~~ 151 (154)
T 2qkb_A 123 -DIQWMHVPGHSGFIGNEEADRLAREGAKQ 151 (154)
T ss_dssp -EEEEEECCTTSSCHHHHHHHHHHHHHHTC
T ss_pred -ceEEEEccCCCCCHhHHHHHHHHHHHHHh
Confidence 377899996 5688899998887753
No 37
>2kq2_A Ribonuclease H-related protein; PSI, NESG, protein structure, APO enzyme, structural genomics, protein structure initiative; NMR {Desulfitobacterium hafniense dcb-2} PDB: 2kw4_A
Probab=96.02 E-value=0.00034 Score=58.23 Aligned_cols=85 Identities=9% Similarity=-0.018 Sum_probs=57.0
Q ss_pred CCCchHHHHHHHHHH-HHhhcCCeEEEEEEEeCCHHHHHHhHHHHhcCCCCCCCCCHHHHHHHHHHHHH-hHHhhcee--
Q psy9912 30 ATNSTIDRRKMIHEM-VVDKMGYKLFFVESVCDDPSIIEQNIMEVKVNSPDYQDMNREAALQDFLQRIM-HYEERYEA-- 105 (366)
Q Consensus 30 aTN~t~e~r~~i~~~-~~~~~~~~~~~iE~~~d~~~vi~~ni~~~k~~~pdy~~~~~e~a~~~~~~r~~-~~~~~y~p-- 105 (366)
.||+.+|..+++..+ .+.+.++ -|.++.||+.|.++..+.||.+++.. ....++.+++. .+++.|+|
T Consensus 48 ~tNn~aEl~A~~~AL~~a~~~~~---~v~I~tDS~~i~~w~~~~w~~~~~~~------~~~~~l~~~l~~~v~~~wV~gH 118 (147)
T 2kq2_A 48 MRNVAGEIAAALYAVKKASQLGV---KIRILHDYAGIAFWATGEWKAKNEFT------QAYAKLMNQYRGIYSFEKVKAH 118 (147)
T ss_dssp TCTTHHHHHHHHHHHHHHHHHTC---CCCBSSCCSTHHHHTTSSSSCCHHHH------HHHHCGGGGGSTTCCBCCCCCC
T ss_pred ccHHHHHHHHHHHHHHHHHHCCC---eEEEEECcHHHHHHHhCCCccCCcch------HHHHHHHHHhcCCeeEEEecCc
Confidence 599999999999876 3555666 47899999877765544444433211 12223333332 56788888
Q ss_pred --CchhhHHhhhhHhhhccC
Q psy9912 106 --LNEESEAALSFMRIYNTG 123 (366)
Q Consensus 106 --~~~~~~~~~~~ik~id~g 123 (366)
+..|+.+|.++.++++..
T Consensus 119 ~g~~~Ne~AD~LA~~a~~~~ 138 (147)
T 2kq2_A 119 SGNEFNDYVDMKAKSALGIR 138 (147)
T ss_dssp CCCHHHHHHHHHHHHHHTCC
T ss_pred CCCcchHHHHHHHHHHHhcc
Confidence 577889999999988653
No 38
>1nd6_A Prostatic acid phosphatase; PAP, prostate, phosphate, inhibi hydrolase; HET: NAG MAN 1PE; 2.40A {Homo sapiens} SCOP: c.60.1.2 PDB: 1nd5_A* 2hpa_A* 1cvi_A* 1rpa_A* 1rpt_A* 2l3h_A 2l77_A 2l79_A
Probab=95.95 E-value=0.0085 Score=56.61 Aligned_cols=64 Identities=20% Similarity=0.191 Sum_probs=46.9
Q ss_pred eEEEeeccccccccCCc---------ccCCCCCCHhhHHHHHHHHHHHhcCCC---------CCcEEEecchHHHHHHHH
Q psy9912 152 TIYLTRHGESEHNLQGI---------IGGDSSLSERGQLYSQALGKFIAQQDI---------PGLRIWTSWLKRTIQTVA 213 (366)
Q Consensus 152 ~I~LvRHGes~~n~~~~---------~~gD~~LT~~G~~qA~~l~~~l~~~~~---------~~~~i~tSpl~Ra~qTA~ 213 (366)
-.+|.|||......... ..|...||+.|.+|...+|+++++.=. ....++||...||++||+
T Consensus 6 v~vl~RHG~R~P~~~~~~~~~~~~~w~~~~g~LT~~G~~q~~~lG~~lr~rY~~ll~~~~~~~~v~vrst~~~Rt~~SA~ 85 (354)
T 1nd6_A 6 VTLVFRHGDRSPIDTFPTDPIKESSWPQGFGQLTQLGMEQHYELGEYIRKRYRKFLNESYKHEQVYIRSTDVDRTLMSAM 85 (354)
T ss_dssp EEEEEECCCBCCSCCCTTCSCCGGGSTTCTTCBCHHHHHHHHHHHHHHHHHTTTTTCSSCCGGGEEEEEESCHHHHHHHH
T ss_pred EEEEecCCCCCCccccCCCCCccccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccccCcCeEEEEECCchHHHHHHH
Confidence 35688999876543210 012358999999999999999976411 123689999999999999
Q ss_pred hc
Q psy9912 214 TC 215 (366)
Q Consensus 214 ~i 215 (366)
.+
T Consensus 86 ~f 87 (354)
T 1nd6_A 86 TN 87 (354)
T ss_dssp HH
T ss_pred HH
Confidence 86
No 39
>3h08_A RNH (ribonuclease H); RNAse H, 3D-structure, endonuclease, hydrolase, magnesium, metal-binding; 1.60A {Chlorobaculum tepidum}
Probab=95.89 E-value=0.0075 Score=49.69 Aligned_cols=90 Identities=10% Similarity=-0.071 Sum_probs=58.5
Q ss_pred EeCCCchHHHHHHHHHHHHhhcCCeEEEEEEEeCCHHHHHHhHH----HHhcCC---CCCCCC-CHH--HHHHHHHHHHH
Q psy9912 28 FDATNSTIDRRKMIHEMVVDKMGYKLFFVESVCDDPSIIEQNIM----EVKVNS---PDYQDM-NRE--AALQDFLQRIM 97 (366)
Q Consensus 28 ~daTN~t~e~r~~i~~~~~~~~~~~~~~iE~~~d~~~vi~~ni~----~~k~~~---pdy~~~-~~e--~a~~~~~~r~~ 97 (366)
.++||+.+|..+++..+ -..... .-|.++.||+.||++..+ .|+.+. .+-... ..+ +.+.++.+++
T Consensus 40 ~~~Tnn~aEl~A~~~AL-~~~~~~--~~v~I~tDS~~vi~~i~~~w~~~W~~~~w~~~~~~~v~n~~l~~~~~~~~~~~- 115 (146)
T 3h08_A 40 PATTNNRMELMAAIKGL-EALKEP--ARVQLYSDSAYLVNAMNEGWLKRWVKNGWKTAAKKPVENIDLWQEILKLTTLH- 115 (146)
T ss_dssp EEECHHHHHHHHHHHHH-HTCSSC--CEEEEEESCHHHHHHHHSSHHHHHHHTTCC----CCCTTHHHHHHHHHHHHHS-
T ss_pred CCCcHHHHHHHHHHHHH-HhcCcc--CcEEEEeChHHHHHHHHHHHHHHHHHCCCccCCCCCcCCHHHHHHHHHHHhhC-
Confidence 57899999999999987 322223 458999999999998765 234321 111111 111 1223444444
Q ss_pred hHHhhcee----CchhhHHhhhhHhhhc
Q psy9912 98 HYEERYEA----LNEESEAALSFMRIYN 121 (366)
Q Consensus 98 ~~~~~y~p----~~~~~~~~~~~ik~id 121 (366)
.++..|+| +..|+.+|.++.++++
T Consensus 116 ~v~~~~V~gH~g~~~N~~AD~LA~~a~~ 143 (146)
T 3h08_A 116 RVTFHKVKGHSDNPYNSRADELARLAIK 143 (146)
T ss_dssp EEEEEECCC-CCSHHHHHHHHHHHHHHH
T ss_pred ceEEEEcCCcCCcHhHHHHHHHHHHHHH
Confidence 36778999 9999999999988765
No 40
>1zbf_A Ribonuclease H-related protein; RNAse H, RNA/DNA hybrid, DDE motif, hydrolase; 1.50A {Bacillus halodurans} SCOP: c.55.3.1 PDB: 1zbi_A 2g8u_A 2g8i_A 2g8h_A 2g8k_A 2g8f_A 2g8v_A 2g8w_A 3ey1_A* 1zbl_A 3d0p_A* 3i8d_A* 2r7y_A*
Probab=95.64 E-value=0.019 Score=47.29 Aligned_cols=45 Identities=9% Similarity=-0.020 Sum_probs=36.7
Q ss_pred eCCCchHHHHHHHHHH-HHhhcCCeEEEEEEEeCCHHHHHHhHHHHhcC
Q psy9912 29 DATNSTIDRRKMIHEM-VVDKMGYKLFFVESVCDDPSIIEQNIMEVKVN 76 (366)
Q Consensus 29 daTN~t~e~r~~i~~~-~~~~~~~~~~~iE~~~d~~~vi~~ni~~~k~~ 76 (366)
.+|||.+|+.++|..+ .+.+.++ -|++++||+.||++..+.++.+
T Consensus 48 ~~TNN~aEl~A~i~aL~~~~~~~~---~v~i~tDS~~vi~w~~~~~~k~ 93 (142)
T 1zbf_A 48 IGTNNMGEFLAIVHGLRYLKERNS---RKPIYSNSQTAIKWVKDKKAKS 93 (142)
T ss_dssp EECHHHHHHHHHHHHHHHHHHTTC---CCCEEESCHHHHHHHHHTCCCC
T ss_pred CcCcHHHHHHHHHHHHHHHHhCCC---eEEEEEehHHHHHHHHcCCccC
Confidence 7899999999999876 4666665 4899999999999988776433
No 41
>1dkq_A Phytase; histidine acid phosphatase fold, hydrolase; HET: IHP; 2.05A {Escherichia coli} SCOP: c.60.1.2 PDB: 1dkp_A* 1dkm_A 1dkn_A 1dko_A 1dkl_A
Probab=95.37 E-value=0.025 Score=54.90 Aligned_cols=64 Identities=19% Similarity=0.138 Sum_probs=46.6
Q ss_pred eEEEeeccccccccCCc------------c-cCCCCCCHhhHHHHHHHHHHHhcC----CC---------CCcEEEecch
Q psy9912 152 TIYLTRHGESEHNLQGI------------I-GGDSSLSERGQLYSQALGKFIAQQ----DI---------PGLRIWTSWL 205 (366)
Q Consensus 152 ~I~LvRHGes~~n~~~~------------~-~gD~~LT~~G~~qA~~l~~~l~~~----~~---------~~~~i~tSpl 205 (366)
-.+|.|||......... + .+...||..|.+|...+|+++++. ++ +...|+|+..
T Consensus 11 v~vl~RHG~R~P~~~~~~~~~~~~~~w~~w~~~~g~LT~~G~~~~~~lG~~lr~ry~~~~ll~~~~~p~~~~v~v~st~~ 90 (410)
T 1dkq_A 11 VVIVSRAGVRAPTKATQLMQDVTPDAWPTWPVKLGWLTPRGGELIAYLGHYQRQRLVADGLLAKKGCPQSGQVAIIADVD 90 (410)
T ss_dssp EEEEEECCSBCCSCCCHHHHHTCSSCCCCCSSCTTCBCHHHHHHHHHHHHHHHHHHHHTTSSCSSSCCCTTTEEEEECSS
T ss_pred EEEEecCCcCCCCCCCccccccCcccccCCCCCCCccchHHHHHHHHHHHHHHHHHHhcCCCccccCCCcceEEEEeCCc
Confidence 45678999876532210 1 125579999999999999988653 11 1235999999
Q ss_pred HHHHHHHHhc
Q psy9912 206 KRTIQTVATC 215 (366)
Q Consensus 206 ~Ra~qTA~~i 215 (366)
.||++||+.+
T Consensus 91 ~RT~~SA~~~ 100 (410)
T 1dkq_A 91 ERTRKTGEAF 100 (410)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999987
No 42
>3it3_A Acid phosphatase; HAP, hydrolase; HET: 3AM; 1.50A {Francisella tularensis subsp} PDB: 4e3w_A 2glc_A 2glb_A 2gla_A 3it0_A* 3it1_A* 3it2_A 2p36_A*
Probab=95.32 E-value=0.03 Score=52.94 Aligned_cols=65 Identities=18% Similarity=0.162 Sum_probs=47.2
Q ss_pred eeEEEeeccccccccC--C----cccCCCCCCHhhHHHHHHHHHHHhcC-----C-------CCCcEEEecchHHHHHHH
Q psy9912 151 RTIYLTRHGESEHNLQ--G----IIGGDSSLSERGQLYSQALGKFIAQQ-----D-------IPGLRIWTSWLKRTIQTV 212 (366)
Q Consensus 151 ~~I~LvRHGes~~n~~--~----~~~gD~~LT~~G~~qA~~l~~~l~~~-----~-------~~~~~i~tSpl~Ra~qTA 212 (366)
.-+.+.|||....... . ...|...||+.|.+|...+|+++++. + .+...++|++..||++||
T Consensus 10 ~v~v~~RHG~R~p~~~~p~~~~~w~~~~g~LT~~G~~q~~~lG~~lr~~Yv~~~~~l~~~~~~~~v~~rst~~~Rt~~Sa 89 (342)
T 3it3_A 10 FVSMITRHGDRAPFANIENANYSWGTELSELTPIGMNQEYNLGLQLRKRYIDKFGLLPEHYVDQSIYVLSSHTNRTVVSA 89 (342)
T ss_dssp EEEEEEECCCBCCSSCCTTCCCCCSSCTTCBCHHHHHHHHHHHHHHHHHHTTTSCSSCSSCCTTSEEEEECSSHHHHHHH
T ss_pred EEEEEEeCCCCCCcccCCCCcccCCCChHhhhHHHHHHHHHHHHHHHHHHhhccccccccccCceEEEEECCChHHHHHH
Confidence 3567899998654211 0 11234689999999999999988643 1 122378999999999999
Q ss_pred Hhc
Q psy9912 213 ATC 215 (366)
Q Consensus 213 ~~i 215 (366)
+.+
T Consensus 90 ~~~ 92 (342)
T 3it3_A 90 QSL 92 (342)
T ss_dssp HHH
T ss_pred HHH
Confidence 986
No 43
>1ril_A Ribonuclease H; hydrolase(endoribonuclease); 2.80A {Thermus thermophilus} SCOP: c.55.3.1 PDB: 2rpi_A
Probab=95.29 E-value=0.017 Score=48.76 Aligned_cols=92 Identities=12% Similarity=0.004 Sum_probs=58.8
Q ss_pred EeCCCchHHHHHHHHHHHHhhcCCeEEEEEEEeCCHHHHHHhHH----HHhcCCC---CCCCC-CHH--HHHHHHHHHHH
Q psy9912 28 FDATNSTIDRRKMIHEMVVDKMGYKLFFVESVCDDPSIIEQNIM----EVKVNSP---DYQDM-NRE--AALQDFLQRIM 97 (366)
Q Consensus 28 ~daTN~t~e~r~~i~~~~~~~~~~~~~~iE~~~d~~~vi~~ni~----~~k~~~p---dy~~~-~~e--~a~~~~~~r~~ 97 (366)
...||+.+|..+++..+ -..... --|+++.||+.||++..+ .||.+.- +=... ..+ ..+..+.+++
T Consensus 44 ~~~Tnn~aEl~Ai~~AL-~~~~~~--~~v~I~tDS~~vi~~i~~~w~~~W~~~~w~~~~g~~v~n~~l~~~i~~l~~~~- 119 (166)
T 1ril_A 44 ACTTNNRMELKAAIEGL-KALKEP--CEVDLYTDSHYLKKAFTEGWLEGWRKRGWRTAEGKPVKNRDLWEALLLAMAPH- 119 (166)
T ss_dssp EEECHHHHHHHHHHHHH-HSCCSC--CEEEEECCCHHHHHHHHSSHHHHHHHTTSBCTTSSBCTTHHHHHHHHHHHTTS-
T ss_pred CCCcHHHHHHHHHHHHH-HHhccC--CeEEEEeChHHHHHHHhhhHHHHHHhcccccccCCccCcHHHHHHHHHHHhcC-
Confidence 46899999999999986 222112 258999999999998776 3333221 00011 112 1122233332
Q ss_pred hHHhhcee----CchhhHHhhhhHhhhccC
Q psy9912 98 HYEERYEA----LNEESEAALSFMRIYNTG 123 (366)
Q Consensus 98 ~~~~~y~p----~~~~~~~~~~~ik~id~g 123 (366)
.++..|+| +..|+.+|.++.++++..
T Consensus 120 ~v~~~wV~gH~g~~~Ne~AD~LAk~a~~~~ 149 (166)
T 1ril_A 120 RVRFHFVKGHTGHPENERVDREARRQAQSQ 149 (166)
T ss_dssp EEECCCCCGGGSCTHHHHHHHHHHHHHTSS
T ss_pred eEEEEEeeCCCCchhHHHHHHHHHHHHHHh
Confidence 46788999 889999999999988653
No 44
>2e4l_A Ribonuclease HI, RNAse HI; hydrolase, endoribonuclease; 2.00A {Shewanella oneidensis} PDB: 2zqb_A
Probab=95.06 E-value=0.013 Score=49.07 Aligned_cols=91 Identities=11% Similarity=-0.037 Sum_probs=58.2
Q ss_pred EeCCCchHHHHHHHHHHHHhhcCCeEEEEEEEeCCHHHHHHhHH---HHhcCCC---CCCCC-CHH--HHHHHHHHHHHh
Q psy9912 28 FDATNSTIDRRKMIHEMVVDKMGYKLFFVESVCDDPSIIEQNIM---EVKVNSP---DYQDM-NRE--AALQDFLQRIMH 98 (366)
Q Consensus 28 ~daTN~t~e~r~~i~~~~~~~~~~~~~~iE~~~d~~~vi~~ni~---~~k~~~p---dy~~~-~~e--~a~~~~~~r~~~ 98 (366)
...||+.+|..+++..+ -..... --|.++.||+.||++... .||.+.. +=+.. ..+ ..+..+.+++ .
T Consensus 42 ~~~tn~~aEl~A~~~AL-~~~~~~--~~v~I~tDS~~vi~~i~~w~~~W~~n~~~~~~g~~v~n~~l~~~i~~l~~~~-~ 117 (158)
T 2e4l_A 42 SLTTNNRMELLAPIVAL-EALKEP--CKIILTSDSQYMRQGIMTWIHGWKKKGWMTSNRTPVKNVDLWKRLDKAAQLH-Q 117 (158)
T ss_dssp EEECHHHHHHHHHHHHH-HTCSSC--CEEEEEECCHHHHHHHHTHHHHHHHTTTBCTTSSBCTTHHHHHHHHHHHTTS-E
T ss_pred CCCccHHHHHHHHHHHH-HHhccC--CeEEEEeCHHHHHHHHHHHHHHHHHccccccCCCcccCHHHHHHHHHHHccC-c
Confidence 46899999999999986 222112 358899999999987765 2332221 10111 122 1223333332 4
Q ss_pred HHhhcee----CchhhHHhhhhHhhhcc
Q psy9912 99 YEERYEA----LNEESEAALSFMRIYNT 122 (366)
Q Consensus 99 ~~~~y~p----~~~~~~~~~~~ik~id~ 122 (366)
++..|+| +..|+.+|.++.++.+.
T Consensus 118 v~~~wV~gH~g~~~Ne~AD~LAk~a~~~ 145 (158)
T 2e4l_A 118 IDWRWVKGHAGHAENERCDQLARAAAEA 145 (158)
T ss_dssp EEEEECCTTCCCHHHHHHHHHHHHHHHS
T ss_pred EEEEEccCCCCchhHHHHHHHHHHHHHh
Confidence 6778998 88899999999988764
No 45
>1jl1_A Ribonuclease HI; RNAse HI, protein stability, thermostability, hydrogen exchange, cooperativity, hydrolase; 1.30A {Escherichia coli} SCOP: c.55.3.1 PDB: 1f21_A 1jxb_A 1g15_A 1rch_A 1rdd_A 1rnh_A* 2rn2_A 1rda_A 1law_A 1rdb_A 1lav_A 3aa4_A 1rbu_A 1gob_A 1rdc_A 1kvc_A 3aa3_A 3aa2_A 3aa5_X 1rbv_A ...
Probab=94.69 E-value=0.015 Score=48.49 Aligned_cols=92 Identities=13% Similarity=-0.036 Sum_probs=58.7
Q ss_pred EeCCCchHHHHHHHHHHHHhhcCCeEEEEEEEeCCHHHHHHhHH---HHhcCCC---CCCCC-CHH--HHHHHHHHHHHh
Q psy9912 28 FDATNSTIDRRKMIHEMVVDKMGYKLFFVESVCDDPSIIEQNIM---EVKVNSP---DYQDM-NRE--AALQDFLQRIMH 98 (366)
Q Consensus 28 ~daTN~t~e~r~~i~~~~~~~~~~~~~~iE~~~d~~~vi~~ni~---~~k~~~p---dy~~~-~~e--~a~~~~~~r~~~ 98 (366)
...||+.+|..+++..+ -..... --|+++.||+.++++... .||.+.. +=+.. ..+ +.+.++.+++ .
T Consensus 40 ~~~tn~~aEl~A~~~aL-~~~~~~--~~v~I~tDS~~vi~~i~~w~~~W~~n~~~~~~g~~v~n~~l~~~i~~l~~~~-~ 115 (155)
T 1jl1_A 40 TRTTNNRMELMAAIVAL-EALKEH--AEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQH-Q 115 (155)
T ss_dssp EEECHHHHHHHHHHHHH-HTCCSC--CEEEEEECCHHHHHHHHTTHHHHHHTTTBCTTSCBCTTHHHHHHHHHHTTTC-E
T ss_pred CCCcHHHHHHHHHHHHH-HHhCcC--CcEEEEeCHHHHHHHHHHHHHHHhhcccccccCCccCCHHHHHHHHHHHccC-c
Confidence 46899999999999876 322222 357899999999988765 3443321 11111 122 1122222222 4
Q ss_pred HHhhcee----CchhhHHhhhhHhhhccC
Q psy9912 99 YEERYEA----LNEESEAALSFMRIYNTG 123 (366)
Q Consensus 99 ~~~~y~p----~~~~~~~~~~~ik~id~g 123 (366)
++..|+| +..|+.+|.++.++++..
T Consensus 116 v~~~wV~gH~g~~~Ne~AD~LA~~a~~~~ 144 (155)
T 1jl1_A 116 IKWEWVKGHAGHPENERADELARAAAMNP 144 (155)
T ss_dssp EEEEECCSSTTCHHHHHHHHHHHHHHHSC
T ss_pred eEEEEcCCCCCCHHHHHHHHHHHHHHhcc
Confidence 6688999 888999999999888643
No 46
>2wnh_A 3-phytase; histidine acid phosphatase, hydrolase; 1.68A {Klebsiella pneumoniae} PDB: 2wni_A 2wu0_A
Probab=94.43 E-value=0.034 Score=54.06 Aligned_cols=64 Identities=22% Similarity=0.212 Sum_probs=46.2
Q ss_pred eEEEeeccccccccC--------------CcccCCCCCCHhhHHHHHHHHHHHhcC----CC--------CCcEEEecch
Q psy9912 152 TIYLTRHGESEHNLQ--------------GIIGGDSSLSERGQLYSQALGKFIAQQ----DI--------PGLRIWTSWL 205 (366)
Q Consensus 152 ~I~LvRHGes~~n~~--------------~~~~gD~~LT~~G~~qA~~l~~~l~~~----~~--------~~~~i~tSpl 205 (366)
-.+|.|||....... ..-.+...||+.|.+|...+|+++++. ++ ....++||..
T Consensus 19 v~~~~RHG~R~P~~~~~~~l~~~~~~~~~~w~~~~g~LT~~G~~q~~~lG~~lr~rY~~~~ll~~~~~~~~~v~~rst~~ 98 (418)
T 2wnh_A 19 VVELSRHGIRPPTAGNREAIEAATGRPWTEWTTHDGELTGHGYAAVVNKGREEGQHYRQLGLLQAGCPTAESIYVRASPL 98 (418)
T ss_dssp EEEEEECCCCCCCHHHHHHHHHHHTSCCCCCSSCTTSCCHHHHHHHHHHHHHHHHHHHHTTSSCSSSCCTTTEEEEECSS
T ss_pred EEEEEeCCCCCCCCCcchhHHhcCccccccCCCCcCccChhHHHHHHHHHHHHHHHHHhcCCcccCCCCCCeEEEEECCC
Confidence 456789998765321 111125689999999999999988542 11 1235899999
Q ss_pred HHHHHHHHhc
Q psy9912 206 KRTIQTVATC 215 (366)
Q Consensus 206 ~Ra~qTA~~i 215 (366)
.||++||+.+
T Consensus 99 ~Rt~~Sa~~f 108 (418)
T 2wnh_A 99 QRTRATAQAL 108 (418)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999987
No 47
>3ntl_A Acid glucose-1-phosphate phosphatase; histidine acid phosphatase, phytate binding site, hydrolase; HET: IHP; 1.88A {Enterobacter cloacae} PDB: 1nt4_A*
Probab=94.29 E-value=0.072 Score=51.44 Aligned_cols=65 Identities=12% Similarity=0.189 Sum_probs=47.0
Q ss_pred eeEEEeecccccc-cc---------CC----cccCCCCCCHhhHHHHHHHHHHHhcC----C-------C--CCcEEEec
Q psy9912 151 RTIYLTRHGESEH-NL---------QG----IIGGDSSLSERGQLYSQALGKFIAQQ----D-------I--PGLRIWTS 203 (366)
Q Consensus 151 ~~I~LvRHGes~~-n~---------~~----~~~gD~~LT~~G~~qA~~l~~~l~~~----~-------~--~~~~i~tS 203 (366)
.-++|.|||-... .. .. ...|...||+.|.+|...+|+++++. + . ....+++|
T Consensus 9 ~V~vl~RHG~R~P~~~~~~~~~~~~~~~~~~w~~~~g~LT~~G~~q~~~lG~~lr~rY~~~~ll~~~~~~~~~~v~vrst 88 (398)
T 3ntl_A 9 QVLIMSRANLRAPLANNGSVLEQSTPKQWPEWEVPGGQLTTKGGVLEVYMGHYMREWLAQQGMVKTGECPAADSVYAYAN 88 (398)
T ss_dssp EEEEEEECCSBCCCGGGHHHHHHTCSSCCCCCSSCTTSBCHHHHHHHHHHHHHHHHHHHHTTSSCTTSCCCTTSEEEEEC
T ss_pred EEEEEecCCCCCCCCCCcccccCCCCcccccCCCCccccchHHHHHHHHHHHHHHHHHhhcCCCccccCCCcCeEEEEEC
Confidence 3467889998654 11 01 11236789999999999999988642 1 1 23478999
Q ss_pred chHHHHHHHHhc
Q psy9912 204 WLKRTIQTVATC 215 (366)
Q Consensus 204 pl~Ra~qTA~~i 215 (366)
...||++||+.+
T Consensus 89 ~~~Rt~~SA~~f 100 (398)
T 3ntl_A 89 SLQRTVATAQFF 100 (398)
T ss_dssp SSHHHHHHHHHH
T ss_pred CchHHHHHHHHH
Confidence 999999999987
No 48
>1qwo_A Phytase; alpha barrel, beta sandwich, orthogonal bundle, glycoprotein phosphohistidine, hydrolase; HET: NEP NAG; 1.50A {Aspergillus fumigatus} SCOP: c.60.1.2 PDB: 1skb_A* 1sk8_A* 1ska_A* 1sk9_A*
Probab=93.88 E-value=0.056 Score=52.83 Aligned_cols=45 Identities=20% Similarity=0.041 Sum_probs=36.8
Q ss_pred CCCCCCHhhHHHHHHHHHHHhcC-----CCCCcEEEecchHHHHHHHHhc
Q psy9912 171 GDSSLSERGQLYSQALGKFIAQQ-----DIPGLRIWTSWLKRTIQTVATC 215 (366)
Q Consensus 171 gD~~LT~~G~~qA~~l~~~l~~~-----~~~~~~i~tSpl~Ra~qTA~~i 215 (366)
|...||+.|++|...+|++|+.. +-....|+||...||++||+.+
T Consensus 100 g~G~LT~~G~~q~~~lG~~lr~rY~~ll~~~~v~vrST~~~Rti~Sa~~f 149 (442)
T 1qwo_A 100 GADDLTPFGEQQLVNSGIKFYQRYKALARSVVPFIRASGSDRVIASGEKF 149 (442)
T ss_dssp CSSSBCHHHHHHHHHHHHHHHHHTHHHHTTCCCEEEEESCHHHHHHHHHH
T ss_pred CcccchHHHHHHHHHHHHHHHHHHHHHhccCceEEEeCCccHHHHHHHHH
Confidence 35689999999999999998764 1122369999999999999976
No 49
>4htu_A Ribonuclease H, RNAse H; 5-chloro-2'-deoxyuridine, W-C base PAIR, wobble base PAIR, D helix; HET: DNA UCL; 1.49A {Bacillus halodurans} PDB: 3d0p_A* 4hue_A* 4huf_A* 4hug_A* 1zbf_A 1zbi_A 2g8u_A 3uld_A* 3ey1_A* 3twh_A* 2g8f_A 2g8v_A 2g8w_A 2g8i_A 2g8h_A 2g8k_A 3i8d_A* 2r7y_A* 1zbl_A
Probab=93.76 E-value=0.14 Score=41.60 Aligned_cols=40 Identities=10% Similarity=0.041 Sum_probs=33.1
Q ss_pred eCCCchHHHHHHHHHH-HHhhcCCeEEEEEEEeCCHHHHHHhHH
Q psy9912 29 DATNSTIDRRKMIHEM-VVDKMGYKLFFVESVCDDPSIIEQNIM 71 (366)
Q Consensus 29 daTN~t~e~r~~i~~~-~~~~~~~~~~~iE~~~d~~~vi~~ni~ 71 (366)
.+|||.+|+.++|..+ .+.+.+.+ |++++||+.|+++..+
T Consensus 42 ~tTNN~aEl~A~i~aL~~l~~~~~~---v~i~tDSqyVi~wi~~ 82 (134)
T 4htu_A 42 IGTNNMGEFLAIVHGLRYLKERNSR---KPIYSNSQTAIKWVKD 82 (134)
T ss_dssp EECHHHHHHHHHHHHHHHHHHTTCC---CCEEESCHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHhCCCC---EEEEcchHHHHHHHHc
Confidence 7899999999999976 35666665 5899999999987664
No 50
>3k4q_A 3-phytase A; PHYA, 3-phosphotase, MYO-inositol hexakis phosphate phosphohydrolase, 37288-11-2, MYO-inositol hexakis sulfate, 62-1; HET: IHS NAG; 2.20A {Aspergillus niger} SCOP: c.60.1.2 PDB: 3k4p_A* 1ihp_A
Probab=92.45 E-value=0.14 Score=50.21 Aligned_cols=45 Identities=20% Similarity=0.021 Sum_probs=36.3
Q ss_pred CCCCCCHhhHHHHHHHHHHHhcC-----CCCCcEEEecchHHHHHHHHhc
Q psy9912 171 GDSSLSERGQLYSQALGKFIAQQ-----DIPGLRIWTSWLKRTIQTVATC 215 (366)
Q Consensus 171 gD~~LT~~G~~qA~~l~~~l~~~-----~~~~~~i~tSpl~Ra~qTA~~i 215 (366)
++..||+.|.+|...+|.+++.. +-....++||...||++||+.+
T Consensus 101 ~~g~LT~~G~~~~~~lG~~~r~rY~~l~~~~~~~~rst~~~Rt~~Sa~~f 150 (444)
T 3k4q_A 101 GADDLTPFGEQELVNSGIKFYQRYESLTRNIVPFIRSSGSSRVIASGKKF 150 (444)
T ss_dssp CCSSBCHHHHHHHHHHHHHHHHHTHHHHTTCCCEEEEEESHHHHHHHHHH
T ss_pred CcccchHHHHHHHHHHHHHHHHHhHHhccCCceEEEeCCccHHHHHHHHH
Confidence 36689999999999999988653 1112368999999999999986
No 51
>1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1
Probab=92.44 E-value=0.71 Score=38.10 Aligned_cols=56 Identities=14% Similarity=0.104 Sum_probs=42.0
Q ss_pred HHHHhh--cCCeEEEEeCCCchHHHHHHHHHHHHhhcCCeEEEEEEEeCCHHHHHHhHH
Q psy9912 15 VIAWLE--TGGEVAVFDATNSTIDRRKMIHEMVVDKMGYKLFFVESVCDDPSIIEQNIM 71 (366)
Q Consensus 15 ~~~~l~--~~g~vai~daTN~t~e~r~~i~~~~~~~~~~~~~~iE~~~d~~~vi~~ni~ 71 (366)
+..++. ..|...|+|++|.+.++|..+.+. +...|+.+.+|.+-|+.+.+++++..
T Consensus 68 ~~~~l~~~~~g~~vi~d~~~~~~~~~~~l~~~-~~~~~~~~~~i~l~~~~~~~~~R~~~ 125 (181)
T 1ly1_A 68 AKSILYGGDSVKGVIISDTNLNPERRLAWETF-AKEYGWKVEHKVFDVPWTELVKRNSK 125 (181)
T ss_dssp HHHHHTSCSSCCEEEECSCCCSHHHHHHHHHH-HHHHTCEEEEEECCCCHHHHHHHHTT
T ss_pred HHHHHhhccCCCeEEEeCCCCCHHHHHHHHHH-HHHcCCCEEEEEEeCCHHHHHHHHhc
Confidence 444553 337888999999999999888887 77778776677777877777776654
No 52
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=92.18 E-value=0.38 Score=46.51 Aligned_cols=61 Identities=16% Similarity=0.120 Sum_probs=47.7
Q ss_pred HHHHHHHhhcCCeEEEEeCCCchHHHHHHHHHHHHhhcCCeEEEEEEEeCCHHHHHHhHHHHh
Q psy9912 12 LTDVIAWLETGGEVAVFDATNSTIDRRKMIHEMVVDKMGYKLFFVESVCDDPSIIEQNIMEVK 74 (366)
Q Consensus 12 ~~d~~~~l~~~g~vai~daTN~t~e~r~~i~~~~~~~~~~~~~~iE~~~d~~~vi~~ni~~~k 74 (366)
.+.+...+.. |...|+|+||.+..+|..+.+. +++.+..+.+|.+-|+.+.+++++..+..
T Consensus 299 ~~~~~~~l~~-g~~vIiD~~~~~~~~r~~~~~~-~~~~~~~~~~v~l~~~~e~l~~R~~~R~~ 359 (416)
T 3zvl_A 299 VSSCQAALRQ-GKRVVIDNTNPDVPSRARYIQC-AKDAGVPCRCFNFCATIEQARHNNRFREM 359 (416)
T ss_dssp HHHHHHHHHT-TCCEEEESCCCSHHHHHHHHHH-HHHHTCCEEEEEECCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhc-CCcEEEeCCCCCHHHHHHHHHH-HHHcCCeEEEEEEeCCHHHHHHHHHhhcc
Confidence 3445556655 4556799999999999999888 88888888888888888888888876544
No 53
>3qio_A GAG-POL polyprotein; RNAse H, inhibitor, nuclease, transferase, hydrolase- complex; HET: QID; 1.40A {Hiv-1 M} SCOP: c.55.3.1 PDB: 3qin_A* 3hyf_A* 1o1w_A 3lp3_A* 1hrh_A 3k2p_A* 1rdh_A
Probab=92.02 E-value=0.094 Score=43.39 Aligned_cols=88 Identities=11% Similarity=0.107 Sum_probs=54.8
Q ss_pred EEEeCCCchHHHHHHHHHHHHhhcCCeEEEEEEEeCCHHHHHHhHHH---HhcCCCCCCC-----C-CHHHHHHHHHH--
Q psy9912 26 AVFDATNSTIDRRKMIHEMVVDKMGYKLFFVESVCDDPSIIEQNIME---VKVNSPDYQD-----M-NREAALQDFLQ-- 94 (366)
Q Consensus 26 ai~daTN~t~e~r~~i~~~~~~~~~~~~~~iE~~~d~~~vi~~ni~~---~k~~~pdy~~-----~-~~e~a~~~~~~-- 94 (366)
...++||+.+|..+.+..+ -. .+ .-|.++.||+.|++...+- ||.+. ++. . ..+ -.+.+.+
T Consensus 43 ~~~~~Tnn~aEl~A~i~AL-~~-~~---~~v~i~tDS~~v~~~i~~w~~~W~~~g--w~~~~g~~v~n~~-l~~~l~~~l 114 (150)
T 3qio_A 43 TLTDTTNQKTELQAIYLAL-QD-SG---LEVNIVTDSQYALGIITQWIHNWKKRG--WKTADKKPVKNVD-LVNQIIEQL 114 (150)
T ss_dssp EESSCCHHHHHHHHHHHHH-HH-SC---SEEEEEESCHHHHHHHHHHHHHHCC--------------CHH-HHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHH-Hh-CC---CcEEEEeCcHHHHHHHHHHHHHHhhcC--cCcCcCcccccHH-HHHHHHHHH
Confidence 3457899999999999987 32 23 3478999999999876541 22211 211 1 111 2222222
Q ss_pred -HHHhHHhhceeCch----hhHHhhhhHhhhc
Q psy9912 95 -RIMHYEERYEALNE----ESEAALSFMRIYN 121 (366)
Q Consensus 95 -r~~~~~~~y~p~~~----~~~~~~~~ik~id 121 (366)
+...++..|+|... |+.+|.++.++++
T Consensus 115 ~~~~~v~~~wV~gH~g~~~Ne~AD~LA~~a~~ 146 (150)
T 3qio_A 115 IKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIR 146 (150)
T ss_dssp TTCSEEEEEECCTTSCCHHHHHHHHHHHTTTS
T ss_pred hhcCceEEEEccCcCCChhHHHHHHHHHHHHH
Confidence 23456788888875 8889988888765
No 54
>1mu2_A HIV-2 RT; HIV-2 reverse transcriptase, AIDS, polymerase, drug design, transferase; 2.35A {Human immunodeficiency virus 2} SCOP: c.55.3.1 e.8.1.2 PDB: 1mu2_B
Probab=91.14 E-value=0.09 Score=53.01 Aligned_cols=82 Identities=7% Similarity=-0.008 Sum_probs=54.3
Q ss_pred EEeCCCchHHHHHHHHHHHHhhcCCeEEEEEEEeCCHHHHHHhHHHHhc-CCCCCCCCCHHHHHHHHHHHHHhHHhhcee
Q psy9912 27 VFDATNSTIDRRKMIHEMVVDKMGYKLFFVESVCDDPSIIEQNIMEVKV-NSPDYQDMNREAALQDFLQRIMHYEERYEA 105 (366)
Q Consensus 27 i~daTN~t~e~r~~i~~~~~~~~~~~~~~iE~~~d~~~vi~~ni~~~k~-~~pdy~~~~~e~a~~~~~~r~~~~~~~y~p 105 (366)
..++|||.+|+.+.+.++ -. +. --|+++.||+.|+++..+ |+. ++.+ +..+ . .+...+....+..|+|
T Consensus 468 ~~~~TNn~aEl~A~i~aL-~~--~~--~~v~I~tDS~~v~~~i~~-~~~~~~~~---l~~~-~-~~~~~~~~~v~~~wV~ 536 (555)
T 1mu2_A 468 LEQTTNQQAELEAFAMAL-TD--SG--PKVNIIVDSQYVMGIVAS-QPTESESK---IVNQ-I-IEEMIKKEAIYVAWVP 536 (555)
T ss_dssp ESSCCHHHHHHHHHHHHH-HT--SC--SEEEEEESCHHHHHHHHT-CCSEESCH---HHHH-H-HHHHHHCSEEEEEECC
T ss_pred CCCCCHHHHHHHHHHHHH-Hc--CC--CeEEEEEehHHHHHHHhc-ccccccHH---HHHH-H-HHHhccCCcEEEEEEE
Confidence 346899999999999987 33 33 348999999999988765 542 2211 1111 1 1222233456788888
Q ss_pred C----chhhHHhhhhHhh
Q psy9912 106 L----NEESEAALSFMRI 119 (366)
Q Consensus 106 ~----~~~~~~~~~~ik~ 119 (366)
. ..|+.+|.++.++
T Consensus 537 ~H~g~~~Ne~AD~LA~~a 554 (555)
T 1mu2_A 537 AHKGIGGNQEVDHLVSQG 554 (555)
T ss_dssp SSSCCTTHHHHHHHHHTT
T ss_pred CCCCChhHHHHHHHHHhh
Confidence 7 5688888887765
No 55
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=89.88 E-value=2.1 Score=38.77 Aligned_cols=59 Identities=14% Similarity=0.101 Sum_probs=44.1
Q ss_pred HHHHHHhh--cCCeEEEEeCCCchHHHHHHHHHHHHhhcCCeEEEEEEEeCCHHHHHHhHHH
Q psy9912 13 TDVIAWLE--TGGEVAVFDATNSTIDRRKMIHEMVVDKMGYKLFFVESVCDDPSIIEQNIME 72 (366)
Q Consensus 13 ~d~~~~l~--~~g~vai~daTN~t~e~r~~i~~~~~~~~~~~~~~iE~~~d~~~vi~~ni~~ 72 (366)
+-+...|. ..|...|+|++|.+.++|..+.+. ++..++.+.+|.+-|+.+.+++++..+
T Consensus 66 ~~~~~~l~~~~~g~~vi~d~~~~~~~~~~~l~~~-~~~~~~~~~~i~l~~~~e~~~~R~~~R 126 (301)
T 1ltq_A 66 DTAKSILYGGDSVKGVIISDTNLNPERRLAWETF-AKEYGWKVEHKVFDVPWTELVKRNSKR 126 (301)
T ss_dssp HHHHHHTTSCTTCCEEEECSCCCCHHHHHHHHHH-HHHTTCEEEEEECCCCHHHHHHHHHHC
T ss_pred HHHHHHHhhccCCCEEEEeCCCCCHHHHHHHHHH-HHHcCCcEEEEEEECCHHHHHHHHHhc
Confidence 33445663 337788999999999988888887 777788777788888777777777653
No 56
>2lsn_A Reverse transcriptase; RNAse H, viral protein; NMR {Simian foamy virus}
Probab=89.62 E-value=0.39 Score=40.34 Aligned_cols=87 Identities=11% Similarity=-0.027 Sum_probs=45.3
Q ss_pred CCCchHHHHHHHHHH-----HHhhcCCeEEEEEEEeCCHHHHHHhHH---HHhcCC---CCCCCC-CHH--HHHHHHHHH
Q psy9912 30 ATNSTIDRRKMIHEM-----VVDKMGYKLFFVESVCDDPSIIEQNIM---EVKVNS---PDYQDM-NRE--AALQDFLQR 95 (366)
Q Consensus 30 aTN~t~e~r~~i~~~-----~~~~~~~~~~~iE~~~d~~~vi~~ni~---~~k~~~---pdy~~~-~~e--~a~~~~~~r 95 (366)
.||+..|-++.|..+ .+...+.+ |+++.||+-|++.... .||.+. .+=++. ..+ +.+.+.++.
T Consensus 50 ~tnn~te~~Aei~Al~~al~~al~~~~~---v~I~TDS~Yvi~~it~w~~~Wk~ngw~~~~~~pVkN~dL~~~l~~~~~~ 126 (165)
T 2lsn_A 50 PLGNHTAQMAEIAAVEFACKKALKIPGP---VLVITDSFYVAESANKELPYWKSNGFVNNKKKPLKHISKWKSIAECLSM 126 (165)
T ss_dssp EESSCCHHHHHHHHHHHHHHHHHHSSSC---EEEEESCHHHHHHHHTHHHHHHHTTSCSCSSSCCSSHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHhcCCCe---EEEEeChHHHHhhhhhhhhhheeccccccCCCcccCHHHHHHHHHHHhC
Confidence 355555555544432 12233443 7899999999987753 455432 111111 222 112233333
Q ss_pred HHhHHhhcee----------CchhhHHhhhhHhh
Q psy9912 96 IMHYEERYEA----------LNEESEAALSFMRI 119 (366)
Q Consensus 96 ~~~~~~~y~p----------~~~~~~~~~~~ik~ 119 (366)
...++..|+| .+.|+.+|.++.+.
T Consensus 127 ~~~v~~~~VkgH~g~~~~~~~~gNe~AD~LA~~g 160 (165)
T 2lsn_A 127 KPDITIQHEKGHQPTNTSIHTEGNALADKLATQG 160 (165)
T ss_dssp CTTCEEEECCSSSCSSSCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEeCCCCccCCCCChHHHHHHHHHHHh
Confidence 3356677777 33477788777664
No 57
>2gfi_A Phytase; hydrolase; HET: NAG; 2.29A {Debaryomyces castellii}
Probab=89.04 E-value=0.47 Score=46.47 Aligned_cols=43 Identities=23% Similarity=0.144 Sum_probs=34.9
Q ss_pred CCC-CH-------hhHHHHHHHHHHHhcC-----CC-CCcEEEecchHHHHHHHHhc
Q psy9912 173 SSL-SE-------RGQLYSQALGKFIAQQ-----DI-PGLRIWTSWLKRTIQTVATC 215 (366)
Q Consensus 173 ~~L-T~-------~G~~qA~~l~~~l~~~-----~~-~~~~i~tSpl~Ra~qTA~~i 215 (366)
..| |+ .|++|...+|+++++. +. +...|+||...||++||+.+
T Consensus 119 g~LlT~~~~~~~~~G~~q~~~lG~~lr~rY~~ll~~~~~v~vrST~~~Rti~SA~~f 175 (458)
T 2gfi_A 119 EKETSPKNSDSIYAGTTDAMKHGIAFRTKYGELFDTNDTLPVFTSNSGRVYQTSQYF 175 (458)
T ss_dssp TSBCCTTTCCCTTCHHHHHHHHHHHHHHHHGGGCCTTSCEEEEEESBHHHHHHHHHH
T ss_pred hhhcCCccCCCCCccHHHHHHHHHHHHHHhHHhcCcCCceEEEecCCchHHHHHHHH
Confidence 457 89 9999999999998753 11 23369999999999999986
No 58
>2zd1_A Reverse transcriptase/ribonuclease H; P51/P66, hetero dimer, NNRTI, nonnucleoside inhibitor, AIDS, HIV, rilpivirine, diarylpyrimidine, DAPY, DNA recombination; HET: T27; 1.80A {Human immunodeficiency virus 1} PDB: 3is9_A* 3irx_A* 2ze2_A* 3bgr_A* 3qlh_A* 3klf_A* 3qo9_A* 1dlo_A 1bqm_A 2be2_A* 1s6q_A* 1s6p_A* 1s9g_A* 1suq_A* 2b5j_A* 2b6a_A* 2ban_A* 1s9e_A* 1hni_A* 1hnv_A* ...
Probab=88.84 E-value=0.053 Score=54.72 Aligned_cols=82 Identities=7% Similarity=0.052 Sum_probs=50.5
Q ss_pred EEEeCCCchHHHHHHHHHHHHhhcCCeEEEEEEEeCCHHHHHHhHHHHhcC-CCCCCCCCHHHHHHHHHHHHHhHHhhce
Q psy9912 26 AVFDATNSTIDRRKMIHEMVVDKMGYKLFFVESVCDDPSIIEQNIMEVKVN-SPDYQDMNREAALQDFLQRIMHYEERYE 104 (366)
Q Consensus 26 ai~daTN~t~e~r~~i~~~~~~~~~~~~~~iE~~~d~~~vi~~ni~~~k~~-~pdy~~~~~e~a~~~~~~r~~~~~~~y~ 104 (366)
+...+|||.+|+.+++.++ -.. . --|+++.||+.|+++..+ |..+ +.+ +..+ ..+.+.+ ....+..|+
T Consensus 470 ~~~~~TNn~aEl~Ai~~aL-~~~--~--~~v~I~tDS~~vi~~i~~-~~~~~~~~---l~~~-~~~~l~~-~~~v~~~wV 538 (557)
T 2zd1_A 470 PLTNTTNQKTELQAIYLAL-QDS--G--LEVNIVTDSQYALGIIQA-QPDKSESE---LVNQ-IIEQLIK-KEKVYLAWV 538 (557)
T ss_dssp EECSCCHHHHHHHHHHHHH-HHS--C--SEEEEEECCHHHHHHHTT-CCSEESSH---HHHH-HHHHHHH-CSEEEEEEC
T ss_pred cCCCCCHHHHHHHHHHHHH-HhC--C--CcEEEEeChHHHHHHHhc-CCccCCHH---HHHH-HHHHHhc-CCCEEEEEc
Confidence 3457899999999999987 322 2 347999999999988765 4333 211 1111 2122222 235677888
Q ss_pred eC----chhhHHhhhhHh
Q psy9912 105 AL----NEESEAALSFMR 118 (366)
Q Consensus 105 p~----~~~~~~~~~~ik 118 (366)
|. ..|+.+|.++.+
T Consensus 539 ~~H~g~~~Ne~AD~LA~~ 556 (557)
T 2zd1_A 539 PAHKGIGGNEQVDKLVSA 556 (557)
T ss_dssp CSSSCCTTCCGGGGCC--
T ss_pred CCCCCChhHHHHHHHHhc
Confidence 88 346677766543
No 59
>3p1g_A Xenotropic murine leukemia virus-related virus (X H domain; XMRV, RNAse H, reverse transcriptase, transcription; 1.50A {Xenotropic mulv-related virus} PDB: 3v1q_A 3v1o_A 3v1r_A* 2hb5_A 4e89_A
Probab=85.19 E-value=0.54 Score=39.44 Aligned_cols=83 Identities=5% Similarity=-0.068 Sum_probs=52.2
Q ss_pred eCCCchHHHHHHHHHHHHhhcCCeEEEEEEEeCCHHHHHHhHHHHhcCCCCCCCC-CHHHHHHHHHHH---HHhHHhhce
Q psy9912 29 DATNSTIDRRKMIHEMVVDKMGYKLFFVESVCDDPSIIEQNIMEVKVNSPDYQDM-NREAALQDFLQR---IMHYEERYE 104 (366)
Q Consensus 29 daTN~t~e~r~~i~~~~~~~~~~~~~~iE~~~d~~~vi~~ni~~~k~~~pdy~~~-~~e~a~~~~~~r---~~~~~~~y~ 104 (366)
..||+.+|..+.+..+ -... . .-|.++.||+.+++.. |+.. +-+.. ..+ -++++.+. ...++..|+
T Consensus 60 ~~Tnn~aEl~Ai~~AL-~~~~-~--~~v~I~tDS~~vi~~i---w~~~--~g~~v~n~d-l~~~l~~~l~~~~~v~~~wV 129 (165)
T 3p1g_A 60 GTSAQRAELIALTQAL-KMAE-G--KKLNVYTDSRYAFATA---HVHS--EGREIKNKN-EILALLKALFLPKRLSIIHC 129 (165)
T ss_dssp TCCHHHHHHHHHHHHH-HHTB-T--SEEEEEECCHHHHHHH---HSCC--CSCCCSSHH-HHHHHHHHTTSBSEEEEEEC
T ss_pred CCcHHHHHHHHHHHHH-HHcc-C--ceEEEEEchHHHHhhh---hccc--CCCcccCHH-HHHHHHHHHhcCCceEEEEe
Confidence 4699999999999976 2222 2 3478999999999754 5321 11222 222 22344332 235778888
Q ss_pred eCch---------hhHHhhhhHhhhc
Q psy9912 105 ALNE---------ESEAALSFMRIYN 121 (366)
Q Consensus 105 p~~~---------~~~~~~~~ik~id 121 (366)
|.-. |+.+|.++.++..
T Consensus 130 kgH~g~~~~~~~gNe~AD~LA~~aa~ 155 (165)
T 3p1g_A 130 PGHQKGNSAEARGNRMADQAAREAAM 155 (165)
T ss_dssp CSSCCSCSHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCcCcchHHHHHHHHHHHHHh
Confidence 8643 6778888877654
No 60
>1qfx_A Protein (PH 2.5 acid phosphatase); phosphomonoesterase, hydrolase; HET: NAG BMA MAN; 2.40A {Aspergillus niger} SCOP: c.60.1.2
Probab=75.46 E-value=1.8 Score=42.37 Aligned_cols=43 Identities=16% Similarity=0.130 Sum_probs=35.6
Q ss_pred CCCCH----hhHHHHHHHHHHHhcC------CCCCcEEEecchHHHHHHHHhc
Q psy9912 173 SSLSE----RGQLYSQALGKFIAQQ------DIPGLRIWTSWLKRTIQTVATC 215 (366)
Q Consensus 173 ~~LT~----~G~~qA~~l~~~l~~~------~~~~~~i~tSpl~Ra~qTA~~i 215 (366)
..||+ .|++|...+|+++++. ..+...|+||+..||++||+.+
T Consensus 112 g~LT~~~~~~G~~q~~~lG~~lr~rY~~ll~~~~~v~vrST~~~Rti~SA~~f 164 (460)
T 1qfx_A 112 NAETTSGPYAGLLDAYNHGNDYKARYGHLWNGETVVPFFSSGYGRVIETARKF 164 (460)
T ss_dssp TSBCCSSTTCHHHHHHHHHHHHHHHHGGGCCSSSCEEEEEESBHHHHHHHHHH
T ss_pred chhccCCcCCcHHHHHHHHHHHHHHhHHHhCCCCceEEEECCCcHHHHHHHHH
Confidence 57999 9999999999998753 1122369999999999999986
No 61
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A*
Probab=61.80 E-value=33 Score=30.15 Aligned_cols=53 Identities=17% Similarity=0.106 Sum_probs=39.5
Q ss_pred HHHhhcCCeEEEEeCCCchHHHHHHHHHHHHhhcCCeEEEEEEEeCCHHHHHHhHH
Q psy9912 16 IAWLETGGEVAVFDATNSTIDRRKMIHEMVVDKMGYKLFFVESVCDDPSIIEQNIM 71 (366)
Q Consensus 16 ~~~l~~~g~vai~daTN~t~e~r~~i~~~~~~~~~~~~~~iE~~~d~~~vi~~ni~ 71 (366)
...+.. ...|+|+||...+.|..+... +...+.....|.+-|+.+..++.+..
T Consensus 67 ~~~l~~--~~vIiD~~~~~~~~~~~l~~~-a~~~~~~~~vi~l~~~~e~~~~R~~~ 119 (260)
T 3a4m_A 67 DSALKN--YWVIVDDTNYYNSMRRDLINI-AKKYNKNYAIIYLKASLDVLIRRNIE 119 (260)
T ss_dssp HHHHTT--SEEEECSCCCSHHHHHHHHHH-HHHTTCEEEEEEEECCHHHHHHHHHH
T ss_pred HHHhhC--CEEEEeCCcccHHHHHHHHHH-HHHcCCCEEEEEEeCCHHHHHHHHHh
Confidence 344443 677899999999999888887 77777766677777777777776654
No 62
>2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus}
Probab=61.55 E-value=52 Score=26.71 Aligned_cols=54 Identities=7% Similarity=0.173 Sum_probs=31.0
Q ss_pred HHhhcCCeEEEEeCCCchHHHHHHHHHHHHhhcCCeEEEEEEEeCCHHHHHHhHHH
Q psy9912 17 AWLETGGEVAVFDATNSTIDRRKMIHEMVVDKMGYKLFFVESVCDDPSIIEQNIME 72 (366)
Q Consensus 17 ~~l~~~g~vai~daTN~t~e~r~~i~~~~~~~~~~~~~~iE~~~d~~~vi~~ni~~ 72 (366)
..+..| ...|.|++|....++..+.++ ....+...++|-+-|+.+.++++...+
T Consensus 72 ~~l~~g-~~vi~d~~~~~~~~~~~~~~l-~~~~~~~~~~v~l~~~~e~~~~R~~~R 125 (193)
T 2rhm_A 72 TILQSG-QSLIMESNFRVDLDTERMQNL-HTIAPFTPIQIRCVASGDVLVERILSR 125 (193)
T ss_dssp HHHHTT-CCEEEEECCCHHHHHHHHHHH-HHHSCCEEEEEEEECCHHHHHHHHHHH
T ss_pred HHHhCC-CeEEEecCCCCHHHHHHHHHH-HHhcCCeEEEEEEeCCHHHHHHHHHHh
Confidence 445454 455899999544343344444 444445556666667666666665543
No 63
>2cdn_A Adenylate kinase; phosphoryl transfer, associative mechanism, ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase; HET: ADP; 1.9A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1p4s_A
Probab=60.20 E-value=63 Score=26.61 Aligned_cols=72 Identities=18% Similarity=0.306 Sum_probs=43.6
Q ss_pred EEEEeCCCchHHHHHHHHHHHHhhcCCeE-EEEEEEeCCHHHHHHhHHHHhcCCCCCCCCCHHHHHHHHHHHHHhHHhhc
Q psy9912 25 VAVFDATNSTIDRRKMIHEMVVDKMGYKL-FFVESVCDDPSIIEQNIMEVKVNSPDYQDMNREAALQDFLQRIMHYEERY 103 (366)
Q Consensus 25 vai~daTN~t~e~r~~i~~~~~~~~~~~~-~~iE~~~d~~~vi~~ni~~~k~~~pdy~~~~~e~a~~~~~~r~~~~~~~y 103 (366)
..|+|++..+.+.+..+.+. +...+..+ .+|.+.|+.+.++++...+ ..|+ .+. +.+.+|+..|....
T Consensus 100 ~vIldg~~~~~~~~~~l~~~-l~~~~~~~~~vi~l~~~~e~~~~Rl~~R---~r~~---~~~----e~~~~r~~~~~~~~ 168 (201)
T 2cdn_A 100 GFILDGYPRSVEQAKALHEM-LERRGTDIDAVLEFRVSEEVLLERLKGR---GRAD---DTD----DVILNRMKVYRDET 168 (201)
T ss_dssp CEEEESCCCSHHHHHHHHHH-HHHTTCCCCEEEEEECCHHHHHHHHHHH---CCTT---CSH----HHHHHHHHHHHHHT
T ss_pred eEEEECCCCCHHHHHHHHHH-HHhcCCCCCEEEEEECCHHHHHHHHHcC---CCCC---CCH----HHHHHHHHHHHHhh
Confidence 35899988777766666665 54444322 5677778777766665543 2333 122 25677887777666
Q ss_pred eeCc
Q psy9912 104 EALN 107 (366)
Q Consensus 104 ~p~~ 107 (366)
.|+.
T Consensus 169 ~~~~ 172 (201)
T 2cdn_A 169 APLL 172 (201)
T ss_dssp TTHH
T ss_pred HHHH
Confidence 5543
No 64
>2p5t_B PEZT; postsegregational killing system, phosphoryltransferase, HEL helix motif, transcription regulator; 3.20A {Streptococcus pneumoniae}
Probab=59.92 E-value=33 Score=29.89 Aligned_cols=59 Identities=14% Similarity=0.192 Sum_probs=34.8
Q ss_pred HHHHHHhhcCCeEEEEeCCCchHHHHHHHHHHHHhhcCCeEEEEEEEeCCHHHHHHhHHH
Q psy9912 13 TDVIAWLETGGEVAVFDATNSTIDRRKMIHEMVVDKMGYKLFFVESVCDDPSIIEQNIME 72 (366)
Q Consensus 13 ~d~~~~l~~~g~vai~daTN~t~e~r~~i~~~~~~~~~~~~~~iE~~~d~~~vi~~ni~~ 72 (366)
..+...+.+.|.-.|+|+++.+.+.+....+. +++.|+.+..+-+.|+.+..++.+..+
T Consensus 99 ~~~~~~~~~~g~~vVid~~~~~~~~~~~~~~~-l~~~g~~v~lv~l~~~~e~~~~R~~~R 157 (253)
T 2p5t_B 99 ESLVTKLSSLGYNLLIEGTLRTVDVPKKTAQL-LKNKGYEVQLALIATKPELSYLSTLIR 157 (253)
T ss_dssp HHHHHHHHHTTCCEEEECCTTSSHHHHHHHHH-HHHTTCEEEEEEECCCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEeCCCCCHHHHHHHHHH-HHHCCCcEEEEEEeCCHHHHHHHHHHH
Confidence 34444443334445789999988777766776 677788765554444434444444333
No 65
>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans}
Probab=57.68 E-value=27 Score=28.29 Aligned_cols=53 Identities=8% Similarity=0.044 Sum_probs=36.0
Q ss_pred HHhhcCCeEEEEeCCCchHHHHHHHHHHHHhhcCCeEEEEEEEeCCHHHHHHhH
Q psy9912 17 AWLETGGEVAVFDATNSTIDRRKMIHEMVVDKMGYKLFFVESVCDDPSIIEQNI 70 (366)
Q Consensus 17 ~~l~~~g~vai~daTN~t~e~r~~i~~~~~~~~~~~~~~iE~~~d~~~vi~~ni 70 (366)
..+..+|.+-|+|+|....+++....+. +.+.|..+.+|-+.|+.+..++++.
T Consensus 71 ~~l~~~g~~vi~d~~~~~~~~~~~~~~~-l~~~~~~~~~i~l~~~~e~~~~R~~ 123 (183)
T 2vli_A 71 YASREAAGPLIVPVSISDTARHRRLMSG-LKDRGLSVHHFTLIAPLNVVLERLR 123 (183)
T ss_dssp HHHHHCSSCEEEEECCCCHHHHHHHHHH-HHHTTCCCEEEEEECCHHHHHHHHH
T ss_pred HHHHhCCCcEEEeeeccCHHHHHHHHHH-HHhcCCceEEEEEeCCHHHHHHHHH
Confidence 4455556666799999988887766666 6556655555666777666666554
No 66
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B*
Probab=49.21 E-value=1.4e+02 Score=26.53 Aligned_cols=45 Identities=18% Similarity=0.152 Sum_probs=31.4
Q ss_pred hhcCCeEEEEeCCCchHHHHHHHHHHHHhhcCCeEEEEEEEeCCHHH
Q psy9912 19 LETGGEVAVFDATNSTIDRRKMIHEMVVDKMGYKLFFVESVCDDPSI 65 (366)
Q Consensus 19 l~~~g~vai~daTN~t~e~r~~i~~~~~~~~~~~~~~iE~~~d~~~v 65 (366)
+.. |.-.|+|+|+..++.+..+.+. +++.|+.+..+-+.++.+..
T Consensus 107 l~~-g~~vIld~~~~~~~~~~~~~~~-~~~~g~~~~~i~~~~p~~~~ 151 (287)
T 1gvn_B 107 SDQ-GYNLVIEGTGRTTDVPIQTATM-LQAKGYETKMYVMAVPKINS 151 (287)
T ss_dssp HHH-TCCEEECCCCCCSHHHHHHHHH-HHTTTCEEEEEEECCCHHHH
T ss_pred Hhc-CCeEEEECCCCCHHHHHHHHHH-HHhCCCcEEEEEEECCHHHH
Confidence 444 4556799999998877777777 77778876556555555544
No 67
>3c0t_B Mediator of RNA polymerase II transcription subunit 8; beta barrel, channel, protein-protein complex, activator, nucleus; 2.40A {Schizosaccharomyces pombe}
Probab=40.26 E-value=13 Score=21.11 Aligned_cols=19 Identities=32% Similarity=0.587 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHhhcCC
Q psy9912 5 TQCAIDALTDVIAWLETGG 23 (366)
Q Consensus 5 ~~~~~~~~~d~~~~l~~~g 23 (366)
+|-|...|.|+++|+++|.
T Consensus 3 eqnanqmltdilsfmksgk 21 (33)
T 3c0t_B 3 EQNANQMLTDILSFMKSGK 21 (33)
T ss_dssp --CHHHHHHHHHHHHHHCC
T ss_pred chhHHHHHHHHHHHHHcch
Confidence 5668889999999999873
No 68
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=40.12 E-value=1e+02 Score=24.92 Aligned_cols=52 Identities=13% Similarity=0.268 Sum_probs=34.6
Q ss_pred HHhhcCCeEEEEeCCCchHHHHHHHHHHHHhhcCCeEEEEEEEeCCHHHHHHh
Q psy9912 17 AWLETGGEVAVFDATNSTIDRRKMIHEMVVDKMGYKLFFVESVCDDPSIIEQN 69 (366)
Q Consensus 17 ~~l~~~g~vai~daTN~t~e~r~~i~~~~~~~~~~~~~~iE~~~d~~~vi~~n 69 (366)
..+.+.|.+.|.|+++.....|..+.+. +...+.....|-+-|+.+.+.+++
T Consensus 79 ~~~~~~g~~vi~d~~~~~~~~r~~~~~~-~~~~~~~~~~v~L~~~~e~~~~R~ 130 (186)
T 2yvu_A 79 RLLARNGVIVICSFVSPYKQARNMVRRI-VEEEGIPFLEIYVKASLEEVIRRD 130 (186)
T ss_dssp HHHHTTTCEEEEECCCCCHHHHHHHHHH-HHHTTCCEEEEEEECCHHHHHHHC
T ss_pred HHHHhCCCEEEEeCccccHHHHHHHHHH-hhccCCCeEEEEEeCCHHHHHHhh
Confidence 3333447888899999888888888776 665555455565556666555554
No 69
>3dl0_A Adenylate kinase; phosphotransferase, zinc coordination, ATP-binding, binding, nucleotide biosynthesis, nucleotide-binding, trans; HET: AP5; 1.58A {Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A* 2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A* 1s3g_A*
Probab=32.67 E-value=1e+02 Score=25.50 Aligned_cols=80 Identities=15% Similarity=0.232 Sum_probs=50.9
Q ss_pred CeEEEEeCCCchHHHHHHHHHHHHhhcCCeE-EEEEEEeCCHHHHHHhHHHHh------c----CC-CCC----------
Q psy9912 23 GEVAVFDATNSTIDRRKMIHEMVVDKMGYKL-FFVESVCDDPSIIEQNIMEVK------V----NS-PDY---------- 80 (366)
Q Consensus 23 g~vai~daTN~t~e~r~~i~~~~~~~~~~~~-~~iE~~~d~~~vi~~ni~~~k------~----~~-pdy---------- 80 (366)
|...|+|+...+.+....+.+. +...+..+ ..|.+.|+.+.++++...++. . .+ |..
T Consensus 78 ~~~~ildg~p~~~~~~~~~~~~-~~~~~~~~d~vi~l~~~~e~~~~Rl~~R~~~~~~g~~y~~~~~pp~~~~~~~~~~~~ 156 (216)
T 3dl0_A 78 ERGFLLDGFPRTVAQAEALEEI-LEEMGKPIDYVINIQVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGE 156 (216)
T ss_dssp TTCEEEESCCCSHHHHHHHHHH-HHHTTCCCSEEEEEECCGGGHHHHHHTEEEETTTCCEEETTTBCCSSTTBCTTTCCB
T ss_pred cCCEEEeCCCCCHHHHHHHHHH-HHHcCCCCCEEEEEECCHHHHHHHHHCCCcCCccCCccccccCCCcccCcccccccc
Confidence 4556799988887777776666 55555443 567788888888888775410 0 00 100
Q ss_pred ----CCCCHHHHHHHHHHHHHhHHhhceeCc
Q psy9912 81 ----QDMNREAALQDFLQRIMHYEERYEALN 107 (366)
Q Consensus 81 ----~~~~~e~a~~~~~~r~~~~~~~y~p~~ 107 (366)
.+.+. +.+.+|++.|.....|+.
T Consensus 157 l~~r~~d~~----e~i~~rl~~~~~~~~~~~ 183 (216)
T 3dl0_A 157 LYQRADDNE----ETVTKRLEVNMKQTAPLL 183 (216)
T ss_dssp EECCTTCSH----HHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCH----HHHHHHHHHHHHHHHHHH
Confidence 11122 366889999988888775
No 70
>3sr0_A Adenylate kinase; phosphoryl transfer analogue, ALF4, transferase (phosphotran phosphoryl transfer, nucleotide-binding; HET: ADP AMP; 1.56A {Aquifex aeolicus} PDB: 2rh5_A 2rgx_A*
Probab=27.68 E-value=1.5e+02 Score=25.03 Aligned_cols=88 Identities=19% Similarity=0.239 Sum_probs=53.5
Q ss_pred HHHHhhcC-CeEEEEeCCCchHHHHHHHHHHHHhhcCCeE-EEEEEEeCCHHHHHHhHHHHhc----------CCCC---
Q psy9912 15 VIAWLETG-GEVAVFDATNSTIDRRKMIHEMVVDKMGYKL-FFVESVCDDPSIIEQNIMEVKV----------NSPD--- 79 (366)
Q Consensus 15 ~~~~l~~~-g~vai~daTN~t~e~r~~i~~~~~~~~~~~~-~~iE~~~d~~~vi~~ni~~~k~----------~~pd--- 79 (366)
+.+.|.+. | -|+|+-=-|.+.-..+.+. ....+..+ ..|+.-|+++.++++..+++.- .+|.
T Consensus 68 v~~~l~~~~~--~ilDGfPRt~~Qa~~l~~~-l~~~~~~~~~vi~l~v~~e~l~~Rl~~R~~~~~~g~~y~~~~~pp~~g 144 (206)
T 3sr0_A 68 IEEVFPKHGN--VIFDGFPRTVKQAEALDEM-LEKKGLKVDHVLLFEVPDEVVIERLSGRRINPETGEVYHVKYNPPPPG 144 (206)
T ss_dssp HHHHCCSSSC--EEEESCCCSHHHHHHHHHH-HHHTTCCCCEEEEEECCHHHHHHHHHTEEECTTTCCEEETTTBCCCTT
T ss_pred HHHhhccCCc--eEecCCchhHHHHHHHHhh-HHHhccccceeeecCCCHHHHHHHHhCCccccCCCceeeeeccCCCCC
Confidence 33444444 4 5789976666665555555 55555433 4677889999999988875321 1110
Q ss_pred ---CCCCCHHHHHHHHHHHHHhHHhhceeCc
Q psy9912 80 ---YQDMNREAALQDFLQRIMHYEERYEALN 107 (366)
Q Consensus 80 ---y~~~~~e~a~~~~~~r~~~~~~~y~p~~ 107 (366)
.+.-|. -.+-+++|++.|.....|+-
T Consensus 145 ~~l~~r~DD--~~e~i~~Rl~~Y~~~t~pl~ 173 (206)
T 3sr0_A 145 VKVIQREDD--KPEVIKKRLEVYREQTAPLI 173 (206)
T ss_dssp CCCBCCGGG--SHHHHHHHHHHHHHHTTHHH
T ss_pred ceecccCCC--CHHHHHHHHHHHHHHHHHHH
Confidence 111111 22357889999999888875
No 71
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus}
Probab=27.48 E-value=1.3e+02 Score=24.90 Aligned_cols=84 Identities=11% Similarity=0.198 Sum_probs=50.0
Q ss_pred CeEEEEeCCCchHHHHHHHHHHHHhhcCCeE-EEEEEEeCCHHHHHHhHHHHh-----------cCCCCCCCC-------
Q psy9912 23 GEVAVFDATNSTIDRRKMIHEMVVDKMGYKL-FFVESVCDDPSIIEQNIMEVK-----------VNSPDYQDM------- 83 (366)
Q Consensus 23 g~vai~daTN~t~e~r~~i~~~~~~~~~~~~-~~iE~~~d~~~vi~~ni~~~k-----------~~~pdy~~~------- 83 (366)
|...|+|+...+.+....+.+. +...+..+ ..|-+.|+.+.++++..+++. .+-|...+.
T Consensus 78 ~~~~ildg~p~~~~~~~~l~~~-~~~~~~~~d~vi~l~~~~e~~~~Rl~~R~~~~~~g~~y~~~~~pp~~~~~~~~~~~~ 156 (216)
T 3fb4_A 78 QKGFLLDGFPRTVAQADALDSL-LTDLGKKLDYVLNIKVEQEELMKRLTGRWICKTCGATYHTIFNPPAVEGICDKDGGE 156 (216)
T ss_dssp TTCEEEESCCCSHHHHHHHHHH-HHHTTCCCSEEEEEECCHHHHHHHHHSEEEETTTCCEEETTTBCCSSTTBCTTTCCB
T ss_pred CCcEEEeCCCCCHHHHHHHHHH-HHhcCCCCCEEEEEECCHHHHHHHHHcCCCCCccCCccccccCCCCcccccccccCc
Confidence 4556789987887777777666 55555443 456677888877777665410 011111110
Q ss_pred ---CHHHHHHHHHHHHHhHHhhceeCc
Q psy9912 84 ---NREAALQDFLQRIMHYEERYEALN 107 (366)
Q Consensus 84 ---~~e~a~~~~~~r~~~~~~~y~p~~ 107 (366)
..+...+.+.+|++.|...+.|+.
T Consensus 157 l~~r~~d~~e~i~~rl~~~~~~~~~~~ 183 (216)
T 3fb4_A 157 LYQRIDDKPETVKNRLDVNMKQTQPLL 183 (216)
T ss_dssp EECCGGGSHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCHHHHHHHHHHHHHhHHHHH
Confidence 011122367889998988887775
No 72
>3lfh_A Manxa, phosphotransferase system, mannose/fructose-speci component IIA; PTS; 1.80A {Thermoanaerobacter tengcongensis} SCOP: c.54.1.0
Probab=26.08 E-value=61 Score=25.94 Aligned_cols=42 Identities=17% Similarity=0.293 Sum_probs=30.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHH-HcCCeEEEEec---hHHHHHHHHH
Q psy9912 261 YPRGESYEDLVARLEPVIMEL-ERQGNVLVVSH---QAVLRCLLAY 302 (366)
Q Consensus 261 ~p~gES~~d~~~R~~~~i~~l-~~~~~vlIVsH---~~~ir~l~~~ 302 (366)
++.+++..++..++...+.++ ...+.|||.+- |++......+
T Consensus 37 ~~~~~~~~~~~~~i~~~i~~~~~~~~gvliLtDl~GGSp~n~a~~l 82 (144)
T 3lfh_A 37 LNLGDNIEVVRKEVEKIIKEKLQEDKEIIIVVDLFGGSPFNIALSM 82 (144)
T ss_dssp ECTTCCHHHHHHHHHHHHHHHHTTTCEEEEEESSSSSHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHhhCCCCcEEEEEeCCCCCHHHHHHHH
Confidence 456788889999999999988 55567888876 4555555544
No 73
>1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} SCOP: c.37.1.1
Probab=25.46 E-value=2.5e+02 Score=22.21 Aligned_cols=76 Identities=20% Similarity=0.215 Sum_probs=43.5
Q ss_pred CeEEEEeCCCchHHHHHHHHHHHHhhcCCeEEEEEEEeCCHHHHHHhHHHHhc-CCCCCCCCCHHHHHHHHHHHHHhHHh
Q psy9912 23 GEVAVFDATNSTIDRRKMIHEMVVDKMGYKLFFVESVCDDPSIIEQNIMEVKV-NSPDYQDMNREAALQDFLQRIMHYEE 101 (366)
Q Consensus 23 g~vai~daTN~t~e~r~~i~~~~~~~~~~~~~~iE~~~d~~~vi~~ni~~~k~-~~pdy~~~~~e~a~~~~~~r~~~~~~ 101 (366)
|.+-|+|++..+.+.++.+... +.........|-+.|+.+..+++...+... ..++ ...+ .+.+|+..|..
T Consensus 86 ~~~vi~dg~~~~~~~~~~~~~~-~~~~~~~~~~i~l~~~~e~~~~R~~~R~~~~~r~~---~~~~----~~~~~~~~~~~ 157 (196)
T 1tev_A 86 KNKFLIDGFPRNQDNLQGWNKT-MDGKADVSFVLFFDCNNEICIERCLERGKSSGRSD---DNRE----SLEKRIQTYLQ 157 (196)
T ss_dssp CCEEEEESCCCSHHHHHHHHHH-HTTTCEEEEEEEEECCHHHHHHHHHHHHHTSSCCS---CCHH----HHHHHHHHHHH
T ss_pred CCeEEEeCCCCCHHHHHHHHHH-hcccCCCCEEEEEECCHHHHHHHHHcccccCCCCC---CCHH----HHHHHHHHHHH
Confidence 5667899998887766555544 332111123455667777777777654332 2232 1222 45667777776
Q ss_pred hceeC
Q psy9912 102 RYEAL 106 (366)
Q Consensus 102 ~y~p~ 106 (366)
...|+
T Consensus 158 ~~~~~ 162 (196)
T 1tev_A 158 STKPI 162 (196)
T ss_dssp HHHHH
T ss_pred hHHHH
Confidence 66654
No 74
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=24.65 E-value=62 Score=28.51 Aligned_cols=15 Identities=27% Similarity=0.248 Sum_probs=11.8
Q ss_pred CCeeEEEeecccccc
Q psy9912 149 VPRTIYLTRHGESEH 163 (366)
Q Consensus 149 ~~~~I~LvRHGes~~ 163 (366)
+++.|+|+=||.+..
T Consensus 8 ~~~aillv~hGS~~~ 22 (269)
T 2xvy_A 8 QKTGILLVAFGTSVE 22 (269)
T ss_dssp CCEEEEEEECCCCCT
T ss_pred CCceEEEEeCCCCcH
Confidence 346899999999754
No 75
>3hs2_A PHD protein, prevent HOST death protein; intrinsic disorder, DOC, toxin-anti antitoxin; 2.20A {Enterobacteria phage P1}
Probab=22.61 E-value=69 Score=21.10 Aligned_cols=29 Identities=14% Similarity=0.220 Sum_probs=22.0
Q ss_pred CHHHHHHHHHHHHHHHHcCCeEEEEechH
Q psy9912 266 SYEDLVARLEPVIMELERQGNVLVVSHQA 294 (366)
Q Consensus 266 S~~d~~~R~~~~i~~l~~~~~vlIVsH~~ 294 (366)
|+.++..++..++.....+++|+|.-||.
T Consensus 5 ~~~ear~~l~~ll~~v~~~e~v~Itr~g~ 33 (58)
T 3hs2_A 5 NFRTARGNLSEVLNNVEAGEEVEITRRGR 33 (58)
T ss_dssp EHHHHHHSHHHHHHHHHTTCCEEEECTTS
T ss_pred CHHHHHHhHHHHHHHHhCCCcEEEEECCC
Confidence 46788888888988875557777777774
Done!