Query psy9913
Match_columns 309
No_of_seqs 175 out of 1354
Neff 8.5
Searched_HMMs 46136
Date Fri Aug 16 22:50:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9913.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/9913hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK12897 methionine aminopepti 100.0 1.6E-54 3.4E-59 385.3 29.4 245 18-309 2-247 (248)
2 PLN03158 methionine aminopepti 100.0 1.3E-54 2.8E-59 404.8 29.6 250 13-309 130-380 (396)
3 TIGR00500 met_pdase_I methioni 100.0 3.1E-53 6.7E-58 377.0 30.7 244 19-309 2-246 (247)
4 PRK07281 methionine aminopepti 100.0 3E-53 6.4E-58 381.9 28.2 246 17-309 1-279 (286)
5 PRK12318 methionine aminopepti 100.0 9E-53 1.9E-57 380.7 30.2 251 12-309 34-288 (291)
6 PRK12896 methionine aminopepti 100.0 1.3E-52 2.9E-57 374.6 30.3 248 15-309 5-254 (255)
7 PRK05716 methionine aminopepti 100.0 3.1E-52 6.6E-57 371.7 30.1 246 17-309 2-248 (252)
8 COG0024 Map Methionine aminope 100.0 2.4E-51 5.2E-56 358.0 29.2 244 19-309 4-251 (255)
9 PRK09795 aminopeptidase; Provi 100.0 7.7E-51 1.7E-55 380.3 25.9 226 13-309 120-350 (361)
10 COG0006 PepP Xaa-Pro aminopept 100.0 1.3E-50 2.9E-55 381.7 24.0 232 5-308 140-374 (384)
11 KOG2738|consensus 100.0 1.2E-49 2.6E-54 344.0 23.9 245 18-309 114-359 (369)
12 cd01086 MetAP1 Methionine Amin 100.0 1.3E-48 2.9E-53 345.3 28.8 237 26-309 1-238 (238)
13 PRK10879 proline aminopeptidas 100.0 2.1E-49 4.6E-54 377.8 24.6 254 12-309 165-419 (438)
14 PRK15173 peptidase; Provisiona 100.0 1.2E-48 2.7E-53 359.3 24.4 233 4-309 80-314 (323)
15 PRK14575 putative peptidase; P 100.0 1.6E-47 3.4E-52 362.4 24.9 233 4-309 163-397 (406)
16 PRK14576 putative endopeptidas 100.0 4.1E-47 8.8E-52 359.4 25.0 233 4-309 162-396 (405)
17 TIGR02993 ectoine_eutD ectoine 100.0 2.1E-47 4.5E-52 360.2 22.3 231 4-309 143-382 (391)
18 cd01090 Creatinase Creatine am 100.0 1.8E-46 3.8E-51 329.3 26.2 225 26-309 1-228 (228)
19 cd01087 Prolidase Prolidase. E 100.0 1.9E-46 4E-51 332.7 24.6 242 26-309 1-243 (243)
20 PRK13607 proline dipeptidase; 100.0 2.4E-46 5.2E-51 356.2 22.0 264 12-309 153-438 (443)
21 cd01092 APP-like Similar to Pr 100.0 3.1E-43 6.8E-48 304.5 25.2 208 26-304 1-208 (208)
22 KOG2414|consensus 100.0 6.4E-44 1.4E-48 320.3 14.4 252 9-309 217-471 (488)
23 cd01091 CDC68-like Related to 100.0 2.8E-42 6.2E-47 304.7 22.8 229 26-309 1-243 (243)
24 TIGR00495 crvDNA_42K 42K curve 100.0 8.5E-41 1.8E-45 312.6 29.1 245 18-309 11-336 (389)
25 PTZ00053 methionine aminopepti 100.0 9.8E-41 2.1E-45 314.2 27.2 244 19-309 151-466 (470)
26 PF00557 Peptidase_M24: Metall 100.0 7.5E-41 1.6E-45 289.6 23.1 204 27-301 1-207 (207)
27 cd01085 APP X-Prolyl Aminopept 100.0 7.2E-41 1.6E-45 292.6 23.1 210 27-307 5-222 (224)
28 PRK08671 methionine aminopepti 100.0 3.1E-40 6.7E-45 299.4 26.9 227 25-309 1-291 (291)
29 TIGR00501 met_pdase_II methion 100.0 1.5E-39 3.2E-44 295.2 27.3 229 23-309 2-295 (295)
30 cd01088 MetAP2 Methionine Amin 100.0 2.7E-39 5.9E-44 293.2 27.0 226 26-309 1-291 (291)
31 cd01066 APP_MetAP A family inc 100.0 1.6E-39 3.5E-44 279.6 23.8 207 26-304 1-207 (207)
32 cd01089 PA2G4-like Related to 100.0 4.8E-39 1E-43 282.5 25.0 214 26-309 1-228 (228)
33 KOG2737|consensus 100.0 5.8E-40 1.3E-44 292.1 13.3 264 13-309 178-466 (492)
34 KOG2775|consensus 99.9 6.9E-26 1.5E-30 196.7 17.2 267 23-309 82-393 (397)
35 KOG1189|consensus 99.9 1.2E-24 2.6E-29 208.0 16.6 237 11-309 128-377 (960)
36 KOG2413|consensus 99.9 1.2E-24 2.6E-29 205.3 16.0 226 11-305 298-537 (606)
37 KOG2776|consensus 99.9 3.3E-24 7.1E-29 190.6 16.6 288 16-308 11-338 (398)
38 COG5406 Nucleosome binding fac 99.7 3.4E-17 7.3E-22 154.7 15.4 240 11-309 161-417 (1001)
39 cd01066 APP_MetAP A family inc 97.3 0.0062 1.3E-07 51.6 12.7 102 27-130 102-204 (207)
40 KOG2738|consensus 97.2 0.0019 4.1E-08 57.6 8.7 44 133-176 123-166 (369)
41 PLN03158 methionine aminopepti 97.2 0.0033 7.1E-08 59.6 10.7 57 119-175 128-186 (396)
42 cd01092 APP-like Similar to Pr 97.2 0.0098 2.1E-07 50.9 12.5 99 28-129 104-204 (208)
43 PRK05716 methionine aminopepti 97.0 0.013 2.9E-07 51.9 12.1 100 28-130 119-240 (252)
44 cd01088 MetAP2 Methionine Amin 96.8 0.012 2.7E-07 53.5 10.6 43 133-175 2-44 (291)
45 PRK09795 aminopeptidase; Provi 96.8 0.027 5.9E-07 52.8 13.1 104 23-129 236-341 (361)
46 cd01090 Creatinase Creatine am 96.8 0.03 6.4E-07 49.1 12.3 100 28-130 110-220 (228)
47 TIGR00500 met_pdase_I methioni 96.7 0.035 7.6E-07 49.1 12.8 100 28-130 117-238 (247)
48 cd01086 MetAP1 Methionine Amin 96.7 0.037 8E-07 48.6 12.7 100 28-130 109-230 (238)
49 PRK15173 peptidase; Provisiona 96.7 0.029 6.4E-07 51.8 12.2 101 28-129 203-305 (323)
50 cd01091 CDC68-like Related to 96.7 0.021 4.5E-07 50.6 10.7 101 28-130 120-234 (243)
51 PRK14576 putative endopeptidas 96.6 0.04 8.6E-07 52.6 12.5 101 28-129 285-387 (405)
52 PRK14575 putative peptidase; P 96.5 0.04 8.7E-07 52.6 12.2 100 28-130 286-389 (406)
53 COG0024 Map Methionine aminope 96.5 0.037 8.1E-07 49.1 10.9 45 133-177 12-56 (255)
54 PRK12897 methionine aminopepti 96.4 0.04 8.7E-07 48.9 10.8 100 28-130 118-239 (248)
55 TIGR02993 ectoine_eutD ectoine 96.3 0.055 1.2E-06 51.4 12.0 98 28-129 271-373 (391)
56 PF00557 Peptidase_M24: Metall 96.3 0.048 1E-06 46.6 10.4 43 133-175 1-44 (207)
57 PRK12318 methionine aminopepti 96.2 0.082 1.8E-06 48.1 11.9 86 28-116 159-247 (291)
58 PRK12896 methionine aminopepti 96.2 0.1 2.2E-06 46.3 12.2 99 29-130 125-246 (255)
59 PRK08671 methionine aminopepti 96.2 0.12 2.6E-06 47.0 12.8 97 28-129 102-205 (291)
60 PRK07281 methionine aminopepti 96.1 0.073 1.6E-06 48.3 11.1 85 28-115 149-237 (286)
61 cd01087 Prolidase Prolidase. E 95.8 0.15 3.3E-06 44.9 11.5 101 28-129 104-234 (243)
62 cd01089 PA2G4-like Related to 95.5 0.22 4.8E-06 43.5 11.4 99 27-130 120-220 (228)
63 COG0006 PepP Xaa-Pro aminopept 95.2 0.26 5.7E-06 46.6 11.5 100 28-130 263-367 (384)
64 TIGR00501 met_pdase_II methion 94.8 0.21 4.5E-06 45.6 9.3 96 29-126 106-205 (295)
65 TIGR00495 crvDNA_42K 42K curve 94.8 0.32 6.8E-06 46.2 10.7 41 134-174 21-61 (389)
66 PRK10879 proline aminopeptidas 93.3 1.4 3.1E-05 42.5 12.3 101 29-129 284-410 (438)
67 PTZ00053 methionine aminopepti 93.2 0.84 1.8E-05 44.2 10.3 101 28-128 264-375 (470)
68 cd01085 APP X-Prolyl Aminopept 89.6 9.9 0.00022 33.1 12.5 95 31-129 115-215 (224)
69 PRK13607 proline dipeptidase; 85.7 6.6 0.00014 38.0 9.8 42 29-70 270-315 (443)
70 KOG2775|consensus 85.4 11 0.00024 34.2 10.1 40 133-172 86-125 (397)
71 KOG2776|consensus 84.5 5.7 0.00012 36.8 8.1 111 134-302 23-133 (398)
72 KOG1189|consensus 77.5 11 0.00024 38.4 8.0 102 28-130 258-368 (960)
73 cd01666 TGS_DRG_C TGS_DRG_C: 51.7 61 0.0013 23.0 5.7 52 47-109 21-73 (75)
74 PF00254 FKBP_C: FKBP-type pep 42.0 79 0.0017 22.8 5.3 53 98-159 2-61 (94)
75 COG5406 Nucleosome binding fac 33.9 1.6E+02 0.0034 29.9 7.1 73 36-112 307-384 (1001)
76 PF12631 GTPase_Cys_C: Catalyt 31.5 1.8E+02 0.0039 20.2 5.7 42 131-172 10-51 (73)
77 KOG2414|consensus 30.2 3.2E+02 0.0069 26.3 8.2 105 20-130 334-463 (488)
78 PF00249 Myb_DNA-binding: Myb- 29.4 1.2E+02 0.0027 18.9 4.0 44 19-62 2-46 (48)
79 PF07305 DUF1454: Protein of u 28.2 3.3E+02 0.0072 23.1 7.2 42 132-173 114-155 (200)
80 PF07308 DUF1456: Protein of u 27.2 95 0.0021 21.6 3.3 39 24-62 3-41 (68)
81 PF05184 SapB_1: Saposin-like 26.8 1.3E+02 0.0028 17.7 3.6 33 33-65 4-36 (39)
82 PF11020 DUF2610: Domain of un 26.4 1.4E+02 0.0031 21.5 4.1 53 110-169 5-57 (82)
83 PF04355 SmpA_OmlA: SmpA / Oml 22.2 63 0.0014 22.2 1.7 19 42-60 7-25 (71)
84 COG0414 PanC Panthothenate syn 22.1 2.3E+02 0.005 25.6 5.5 53 120-175 185-238 (285)
85 PF14615 Rsa3: Ribosome-assemb 21.0 30 0.00066 22.3 -0.1 29 24-52 16-44 (47)
86 cd04938 TGS_Obg-like TGS_Obg-l 20.7 2.1E+02 0.0046 20.2 4.2 47 47-109 28-74 (76)
87 PF10415 FumaraseC_C: Fumarase 20.3 1.4E+02 0.003 19.7 3.0 35 28-62 10-49 (55)
88 PF09506 Salt_tol_Pase: Glucos 20.1 4.1E+02 0.0089 24.8 6.8 50 22-71 98-147 (381)
No 1
>PRK12897 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=1.6e-54 Score=385.31 Aligned_cols=245 Identities=37% Similarity=0.572 Sum_probs=224.5
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCccccCCCC
Q psy9913 18 PEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVACHGIPD 97 (309)
Q Consensus 18 R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~h~~p~ 97 (309)
-.|||++||++||+|+++++++++++++.++||+||.||++.+...+.++|+.....++.+|++++++|.|+..+|+.|+
T Consensus 2 ~~iKs~~EI~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~i~~g~n~~~~H~~p~ 81 (248)
T PRK12897 2 ITIKTKNEIDLMHESGKLLASCHREIAKIMKPGITTKEINTFVEAYLEKHGATSEQKGYNGYPYAICASVNDEMCHAFPA 81 (248)
T ss_pred ceeCCHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEeccCCEeecCCCC
Confidence 36899999999999999999999999999999999999999999999999987544345578888999999999999999
Q ss_pred CcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhCCcee
Q psy9913 98 SRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQNKLRV 177 (309)
Q Consensus 98 ~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~g~~~ 177 (309)
+++|++||+|++|+|+.++||++|++|||++|+++++++++|+++.++++++++++|||++++||++++++++++.|+..
T Consensus 82 ~~~l~~Gd~V~iD~g~~~~GY~sD~tRT~~vG~~s~~~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~~g~~~ 161 (248)
T PRK12897 82 DVPLTEGDIVTIDMVVNLNGGLSDSAWTYRVGKVSDEAEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANEGFSV 161 (248)
T ss_pred CcccCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998753
Q ss_pred cccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCcccccC-CCCCCCccC
Q psy9913 178 VPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIFHTK-NDYPGKMEP 256 (309)
Q Consensus 178 ~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~~~~-~~~~~~l~~ 256 (309)
.+ +++|||+|+.+||.|.++++. .+.+.+|++
T Consensus 162 ~~-----------------------------------------------~~~GHgiGl~~hE~P~i~~~~~~~~~~~l~~ 194 (248)
T PRK12897 162 AR-----------------------------------------------DFTGHGIGKEIHEEPAIFHFGKQGQGPELQE 194 (248)
T ss_pred CC-----------------------------------------------CeEECccCCcccCCCccCCCCCCCCCCCcCC
Confidence 22 889999999999999886532 355689999
Q ss_pred CcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 257 GMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 257 gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
||||++||+++.+........++|+..+.+|.+++|+||||+||++|+|+||.
T Consensus 195 Gmv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~r~edtv~Vt~~G~e~lt~ 247 (248)
T PRK12897 195 GMVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSAQYEHTIAITKDGPIILTK 247 (248)
T ss_pred CCEEEECCeEecCCCceEECCCCcEEEcCCCCeEeecceEEEEeCCccEEeec
Confidence 99999999999876655556789999989999999999999999999999985
No 2
>PLN03158 methionine aminopeptidase; Provisional
Probab=100.00 E-value=1.3e-54 Score=404.78 Aligned_cols=250 Identities=51% Similarity=0.801 Sum_probs=234.1
Q ss_pred CCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCccc
Q psy9913 13 KSPEVPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVAC 92 (309)
Q Consensus 13 ~v~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~ 92 (309)
.+++.|.|||++||+.||+|++++.++++++.+.++||+||.||++.+.+.+.++|++++.+++.+||..+++|.|...+
T Consensus 130 ~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irpGvTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svcts~N~~i~ 209 (396)
T PLN03158 130 DLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKPGVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVNEVIC 209 (396)
T ss_pred ccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCccccccccCCCceeeeccccccc
Confidence 35678999999999999999999999999999999999999999999999999999999888888899999999999999
Q ss_pred cCCCCCcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHh
Q psy9913 93 HGIPDSRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQ 172 (309)
Q Consensus 93 h~~p~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~ 172 (309)
|+.|++++|++||+|.+|+|+.++||++|++|||++|++++++++++++++++++++++++|||++++||++++++.+++
T Consensus 210 Hgip~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~VG~~~~e~~~l~e~~~eal~~aI~~vkPGv~~~dI~~~i~~~~~~ 289 (396)
T PLN03158 210 HGIPDARKLEDGDIVNVDVTVYYKGCHGDLNETFFVGNVDEASRQLVKCTYECLEKAIAIVKPGVRYREVGEVINRHATM 289 (396)
T ss_pred CCCCCCccCCCCCEEEEEEeEEECCEEEeEEeEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCcccccCC-CCC
Q psy9913 173 NKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIFHTKN-DYP 251 (309)
Q Consensus 173 ~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~~~~~-~~~ 251 (309)
+|+..++ +++|||||+.+|+.|.+.++.. ...
T Consensus 290 ~G~~~v~-----------------------------------------------~~~GHGIG~~~He~P~i~~~~~~~~~ 322 (396)
T PLN03158 290 SGLSVVK-----------------------------------------------SYCGHGIGELFHCAPNIPHYARNKAV 322 (396)
T ss_pred cCCCccC-----------------------------------------------CccCCccccccCCCCCCCcccCCCCC
Confidence 9886443 8899999999999999987543 334
Q ss_pred CCccCCcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 252 GKMEPGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 252 ~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
.+|++||||+|||+++.+......++|+|+..+.+|..++|+|||||||++|+|+||.
T Consensus 323 ~~l~~GMVfTIEP~i~~g~~~~~~~~d~wt~~t~dG~~~aq~E~tvlVTe~G~EiLT~ 380 (396)
T PLN03158 323 GVMKAGQVFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTETGVEVLTA 380 (396)
T ss_pred CEecCCcEEEECCeeccCcccceecCCCceEEecCCceeeEeeeEEEEeCCcceECCC
Confidence 7999999999999999876666678999999999999999999999999999999994
No 3
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=100.00 E-value=3.1e-53 Score=376.99 Aligned_cols=244 Identities=41% Similarity=0.692 Sum_probs=225.3
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCccccCCCCC
Q psy9913 19 EVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVACHGIPDS 98 (309)
Q Consensus 19 ~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~h~~p~~ 98 (309)
+|||++||++||+|+++++++++++.+.++||+||.||++.+...+.+.|+.+.+..+.+|++.+++|.|+..+|+.|++
T Consensus 2 ~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~H~~~~~ 81 (247)
T TIGR00500 2 SLKSPDEIEKIRKAGRLAAEVLEELEREVKPGVSTKELDRIAKDFIEKHGAKPAFLGYYGFPGSVCISVNEVVIHGIPDK 81 (247)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCCccccCCCCCCceeEeccccEEEecCCCC
Confidence 69999999999999999999999999999999999999999999999999886554455788888899999999999999
Q ss_pred cccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhCCceec
Q psy9913 99 RPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQNKLRVV 178 (309)
Q Consensus 99 ~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~g~~~~ 178 (309)
++|++||+|++|+|+.|+||++|++|||++|+++++++++|++++++++++++.+|||++++||++++++++++.|+...
T Consensus 82 ~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~g~~~~ 161 (247)
T TIGR00500 82 KVLKDGDIVNIDVGVIYDGYHGDTAKTFLVGKISPEAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAKGFSVV 161 (247)
T ss_pred cccCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987643
Q ss_pred ccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCcccccC-CCCCCCccCC
Q psy9913 179 PEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIFHTK-NDYPGKMEPG 257 (309)
Q Consensus 179 ~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~~~~-~~~~~~l~~g 257 (309)
. +++|||+|+.+||.|.+..+. ...+.+|++|
T Consensus 162 ~-----------------------------------------------~~~GHgiG~~~~e~p~i~~~~~~~~~~~l~~g 194 (247)
T TIGR00500 162 R-----------------------------------------------EYCGHGIGRKFHEEPQIPNYGKKFTNVRLKEG 194 (247)
T ss_pred c-----------------------------------------------CccCCccCcccCCCCccCCcCcCCCCCEecCC
Confidence 2 789999999999999776532 3457999999
Q ss_pred cEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 258 MTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 258 mv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
|||++||++|.+.+.+....++|+...+++.+++|+||||+||++|+|+||.
T Consensus 195 mv~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~g~ried~v~Vt~~G~e~Lt~ 246 (247)
T TIGR00500 195 MVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSAQFEHTIVITDNGPEILTE 246 (247)
T ss_pred CEEEEeeEEEcCCCcEEECCCCCEEEccCCCeEEEEeEEEEEcCCccEEccC
Confidence 9999999999988777777789999999999999999999999999999985
No 4
>PRK07281 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=3e-53 Score=381.87 Aligned_cols=246 Identities=24% Similarity=0.430 Sum_probs=222.5
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCC----CCCCceeEecCCCccc
Q psy9913 17 VPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNY----KGYPKSICTSVNNVAC 92 (309)
Q Consensus 17 ~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~----~~~~~~v~~g~~~~~~ 92 (309)
|..+||++||++||+|++++.+++.++.+.++||+||.||++.++..+.+.|+.+..+++ .+||+++++|.|+..+
T Consensus 1 m~~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~pG~te~ei~~~~~~~~~~~g~~~~~~G~~~~~~~f~~~v~~G~n~~~~ 80 (286)
T PRK07281 1 MITLKSAREIEAMDRAGDFLASIHIGLRDLIKPGVDMWEVEEYVRRRCKEENVLPLQIGVDGAMMDYPYATCCGLNDEVA 80 (286)
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCcccccCCCCcccCCCcceEEecccccc
Confidence 357999999999999999999999999999999999999999999999999987654432 4699999999999999
Q ss_pred cCCCCCcccCCCCeEEEeEEE---------------------------EECCEEeeeEEEEEeCCCCHHHHHHHHHHHHH
Q psy9913 93 HGIPDSRPLEDGDIVNVDVTV---------------------------YLNGYHGDCSATFCVGEVDASGKFLVNVAQQA 145 (309)
Q Consensus 93 h~~p~~~~l~~gd~v~iD~g~---------------------------~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a 145 (309)
|+.|++++|++||+|++|+|+ .|+||++|++|||++|+++++++++|++++++
T Consensus 81 H~~p~~~~l~~Gd~v~iD~g~~~~~~~y~~d~~~~~~~~~~~~~~~~~~~~gy~~D~~rT~~vG~~~~~~~~l~~~~~ea 160 (286)
T PRK07281 81 HAFPRHYILKEGDLLKVDMVLSEPLDKSIVDVSKLNFDNVEQMKKYTESYRGGLADSCWAYAVGTPSDEVKNLMDVTKEA 160 (286)
T ss_pred CCCCCCcCcCCCCEEEEEecccccccccccccccccccccccccccccccCCEEeeeEEEEECCCCCHHHHHHHHHHHHH
Confidence 999999999999999999997 49999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHhCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhcccccee
Q psy9913 146 LHAAISVVKPGEYFSTIGSIIENVAKQNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVV 225 (309)
Q Consensus 146 ~~~~~~~lkpG~~~~dv~~~~~~~~~~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 225 (309)
++++++.+|||++++||++++++++++.|+....
T Consensus 161 ~~~ai~~~kpG~~~~di~~a~~~~~~~~G~~~~~---------------------------------------------- 194 (286)
T PRK07281 161 MYRGIEQAVVGNRIGDIGAAIQEYAESRGYGVVR---------------------------------------------- 194 (286)
T ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHHHcCCccCC----------------------------------------------
Confidence 9999999999999999999999999998764221
Q ss_pred eccccccccccccCCCccccc-CCCCCCCccCCcEEEEccccccCCceeEE-ecCCceEEecCCCceeeeeEEEEEcCCC
Q psy9913 226 PEILGHGIGSYFHGPPDIFHT-KNDYPGKMEPGMTFTIEPVLTNGNGQVTM-LEDGWTIVTEDDSRTAQFEHTVLVTYDG 303 (309)
Q Consensus 226 ~~~~GHgiG~~~~e~p~i~~~-~~~~~~~l~~gmv~~iep~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~edtvlVt~~G 303 (309)
+++|||||+.+||.|.+.++ .++.+.+|++||||++||++|.+...+.. .+++|.+.+.++..++|+||||+||++|
T Consensus 195 -~~~GHGIGl~~hE~P~i~~~~~~~~~~~Le~GMV~tiEPgiy~~~~~~~~~~~~gw~~~~~~g~~gvr~EdtvlVT~~G 273 (286)
T PRK07281 195 -DLVGHGVGPTMHEEPMVPNYGTAGRGLRLREGMVLTIEPMINTGTWEIDTDMKTGWAHKTLDGGLSCQYEHQFVITKDG 273 (286)
T ss_pred -CeeeeeCCCccCCCCcCCCcccCCCCCEECCCCEEEECCeeEcCCcceecccCCCceEEecCCCcEEEeccEEEEeCCc
Confidence 88999999999999988654 24567899999999999999986554332 4689999999999999999999999999
Q ss_pred eeecCC
Q psy9913 304 YKVLTY 309 (309)
Q Consensus 304 ~e~LT~ 309 (309)
+|+||.
T Consensus 274 ~e~LT~ 279 (286)
T PRK07281 274 PVILTS 279 (286)
T ss_pred ceECCC
Confidence 999984
No 5
>PRK12318 methionine aminopeptidase; Provisional
Probab=100.00 E-value=9e-53 Score=380.74 Aligned_cols=251 Identities=41% Similarity=0.704 Sum_probs=225.6
Q ss_pred CCCCCccc-cCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCC--CCCCceeEecCC
Q psy9913 12 GKSPEVPE-VKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNY--KGYPKSICTSVN 88 (309)
Q Consensus 12 ~~v~~~R~-iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~--~~~~~~v~~g~~ 88 (309)
..++.+|. |||++||+.||+|+++++++++++++.++||+||.||++.++..+.+.|..++..++ .+|++.+++|.|
T Consensus 34 ~~~~~~~i~IKs~~EIe~~R~Aa~I~~~a~~a~~~~irpG~tE~Eiaa~~~~~~~~~G~~~~~~~~~~~~f~~~v~~g~n 113 (291)
T PRK12318 34 LYASQYDIIIKTPEQIEKIRKACQVTARILDALCEAAKEGVTTNELDELSRELHKEYNAIPAPLNYGSPPFPKTICTSLN 113 (291)
T ss_pred hccCCCceEECCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCccccccCCCCCCcceEeecc
Confidence 35556666 999999999999999999999999999999999999999998888888886654433 258888999999
Q ss_pred CccccCCCCCcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHH
Q psy9913 89 NVACHGIPDSRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIEN 168 (309)
Q Consensus 89 ~~~~h~~p~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~ 168 (309)
+..+|+.|+++++++||+|++|+|+.++||++|++|||++|+++++++++|+++.++++++++.+|||++++||++++++
T Consensus 114 ~~~~H~~p~~~~l~~GD~V~vD~g~~~~GY~aDitRT~~vG~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~ 193 (291)
T PRK12318 114 EVICHGIPNDIPLKNGDIMNIDVSCIVDGYYGDCSRMVMIGEVSEIKKKVCQASLECLNAAIAILKPGIPLYEIGEVIEN 193 (291)
T ss_pred ceeecCCCCCCccCCCCEEEEEEeEEECcEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCcccccCC
Q psy9913 169 VAKQNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIFHTKN 248 (309)
Q Consensus 169 ~~~~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~~~~~ 248 (309)
++++.|+.... +++|||||+.+||.|.+.++.+
T Consensus 194 ~~~~~G~~~~~-----------------------------------------------~~~GHgIGl~~hE~P~i~~~~~ 226 (291)
T PRK12318 194 CADKYGFSVVD-----------------------------------------------QFVGHGVGIKFHENPYVPHHRN 226 (291)
T ss_pred HHHHcCCccCC-----------------------------------------------CcccCCcCccccCCCcccCcCC
Confidence 99999875322 7899999999999999876545
Q ss_pred CCCCCccCCcEEEEccccccCC-ceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 249 DYPGKMEPGMTFTIEPVLTNGN-GQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 249 ~~~~~l~~gmv~~iep~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
+.+.+|++||||++||+++.+. +++...+++|++...||..++++||||+||++|+|+||.
T Consensus 227 ~~~~~L~~GMV~~iEP~i~~~~~~g~~~~~~~~~~~~~~g~~~~~~edtv~VTe~G~e~LT~ 288 (291)
T PRK12318 227 SSKIPLAPGMIFTIEPMINVGKKEGVIDPINHWEARTCDNQPSAQWEHTILITETGYEILTL 288 (291)
T ss_pred CCCCEeCCCCEEEECCEEEcCCCceEEecCCCcEEEecCCCeeeeeeeEEEEcCCcceeCCC
Confidence 5568999999999999999764 333334689999999999999999999999999999994
No 6
>PRK12896 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=1.3e-52 Score=374.57 Aligned_cols=248 Identities=42% Similarity=0.681 Sum_probs=228.5
Q ss_pred CCccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCccccC
Q psy9913 15 PEVPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVACHG 94 (309)
Q Consensus 15 ~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~h~ 94 (309)
.++++|||++||++||+|+++++++++++++.++||+||.||++.+.+.+.+.|+.+.+..+.+|+..+++|.|+..+|+
T Consensus 5 ~~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~h~ 84 (255)
T PRK12896 5 GRGMEIKSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCISVNEEVAHG 84 (255)
T ss_pred CCceeECCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEecCCCeeEec
Confidence 35678999999999999999999999999999999999999999999999999998765555678888889999999999
Q ss_pred CCCCcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhCC
Q psy9913 95 IPDSRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQNK 174 (309)
Q Consensus 95 ~p~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~g 174 (309)
.|++++|++||+|++|+|+.++||++|++|||++|+++++++++|++++++++++++.+|||++++||++++++++++.|
T Consensus 85 ~p~~~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~G 164 (255)
T PRK12896 85 IPGPRVIKDGDLVNIDVSAYLDGYHGDTGITFAVGPVSEEAEKLCRVAEEALWAGIKQVKAGRPLNDIGRAIEDFAKKNG 164 (255)
T ss_pred CCCCccCCCCCEEEEEEeEEECcEEEeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCcccc-c-CCCCCC
Q psy9913 175 LRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIFH-T-KNDYPG 252 (309)
Q Consensus 175 ~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~~-~-~~~~~~ 252 (309)
+...+ +++|||+|+.+||.|.+.. + .++.+.
T Consensus 165 ~~~~~-----------------------------------------------~~~GHgiG~~~he~p~~~~~~~~~~~~~ 197 (255)
T PRK12896 165 YSVVR-----------------------------------------------DLTGHGVGRSLHEEPSVILTYTDPLPNR 197 (255)
T ss_pred CEecc-----------------------------------------------CcccCCcCcccccCCCccccCCCCCCCC
Confidence 75432 7899999999999996543 1 245678
Q ss_pred CccCCcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 253 KMEPGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 253 ~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
+|++||||++||+++.+...+...+++|++.+.++.+++|+||||+||++|+|+||+
T Consensus 198 ~le~GmV~~iEp~i~~g~~~~~~~~~~~~~~~~~~~~~~~~edtv~vt~~G~e~Lt~ 254 (255)
T PRK12896 198 LLRPGMTLAVEPFLNLGAKDAETLDDGWTVVTPDKSLSAQFEHTVVVTRDGPEILTD 254 (255)
T ss_pred EecCCcEEEEeceEEcCCCceEEcCCCCEEEecCCCeEEEEEEEEEEcCCcceecCC
Confidence 999999999999999988888888999999999999999999999999999999995
No 7
>PRK05716 methionine aminopeptidase; Validated
Probab=100.00 E-value=3.1e-52 Score=371.66 Aligned_cols=246 Identities=49% Similarity=0.772 Sum_probs=226.9
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCccccCCC
Q psy9913 17 VPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVACHGIP 96 (309)
Q Consensus 17 ~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~h~~p 96 (309)
+-+|||++||+.||+|+++++++++++++.++||+||.||++.+.+.+.++|..+.+..+.+|++.+++|.|...+|+.|
T Consensus 2 ~~~iKs~~Ei~~~r~A~~i~~~~~~~a~~~i~pG~se~ela~~~~~~~~~~G~~~~~~~~~~~~~~~~~g~~~~~~h~~~ 81 (252)
T PRK05716 2 AITIKTPEEIEKMRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRDQGAIPAPLGYHGFPKSICTSVNEVVCHGIP 81 (252)
T ss_pred ceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHCCCEecccCCCCCCcCeEecccceeecCCC
Confidence 45799999999999999999999999999999999999999999999999998765544556887888999999999999
Q ss_pred CCcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhCCce
Q psy9913 97 DSRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQNKLR 176 (309)
Q Consensus 97 ~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~g~~ 176 (309)
++++|++||+|++|+|+.|+||++|++|||++|+++++++++|++++++++++++++|||++++||+++++++++++|+.
T Consensus 82 ~~~~l~~Gd~v~id~g~~~~gY~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~~~~~~~~g~~ 161 (252)
T PRK05716 82 SDKVLKEGDIVNIDVTVIKDGYHGDTSRTFGVGEISPEDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEAEGFS 161 (252)
T ss_pred CCcccCCCCEEEEEEEEEECCEEEEeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred ecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCccccc-CCCCCCCcc
Q psy9913 177 VVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIFHT-KNDYPGKME 255 (309)
Q Consensus 177 ~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~~~-~~~~~~~l~ 255 (309)
..+ +++|||+|+.+||.|.+..+ .++.+.+|+
T Consensus 162 ~~~-----------------------------------------------~~~GHgiG~~~~e~p~~~~~~~~~~~~~le 194 (252)
T PRK05716 162 VVR-----------------------------------------------EYCGHGIGRKFHEEPQIPHYGAPGDGPVLK 194 (252)
T ss_pred eec-----------------------------------------------CccccccCCccCCCCccCcCCCCCCCCEec
Confidence 432 78999999999999987543 345679999
Q ss_pred CCcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 256 PGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 256 ~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
+||||++||+++.+...+..++++|+...+++.+++++||||+||++|+|+||.
T Consensus 195 ~Gmv~~vEp~i~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~Vt~~G~e~Lt~ 248 (252)
T PRK05716 195 EGMVFTIEPMINAGKREVKTLKDGWTVVTKDGSLSAQYEHTVAVTEDGPEILTL 248 (252)
T ss_pred CCCEEEEccEEEcCCCceEEcCCCCEEEccCCCcEEeeeeEEEEcCCccEEeeC
Confidence 999999999999988888888999999989999999999999999999999984
No 8
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.4e-51 Score=357.96 Aligned_cols=244 Identities=43% Similarity=0.700 Sum_probs=229.9
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCccccCCCC-
Q psy9913 19 EVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVACHGIPD- 97 (309)
Q Consensus 19 ~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~h~~p~- 97 (309)
.+||++||+.||+|++|+.++++.+.+.++||+|..||+...+++++++|+.+++.++.+||..+|.|.|...+||.|+
T Consensus 4 ~ikt~~eiek~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~ciSvNe~v~HgiP~d 83 (255)
T COG0024 4 SIKTPEEIEKMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTCISVNEVVAHGIPGD 83 (255)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCceehhccCcCCCcceEeehhheeeecCCCC
Confidence 3899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCC-HHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhCCce
Q psy9913 98 SRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVD-ASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQNKLR 176 (309)
Q Consensus 98 ~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~-~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~g~~ 176 (309)
+++|++||+|+||+|++++||++|.++||.+|+.+ +..++|.+++++++.++++.+|||++.+||.++++++++++||.
T Consensus 84 ~~vlk~GDiv~IDvg~~~dG~~~Dsa~T~~vg~~~~~~~~~L~~~t~eal~~~I~~vkpG~~l~~Ig~aIq~~~~~~G~~ 163 (255)
T COG0024 84 KKVLKEGDIVKIDVGAHIDGYIGDTAITFVVGEVSDEDAKRLLEATKEALYAGIEAVKPGARLGDIGRAIQEYAESRGFS 163 (255)
T ss_pred CcccCCCCEEEEEEEEEECCeeeeEEEEEECCCCChHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCE
Confidence 56899999999999999999999999999999755 47778999999999999999999999999999999999999998
Q ss_pred ecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCcccccCC-CCCCCcc
Q psy9913 177 VVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIFHTKN-DYPGKME 255 (309)
Q Consensus 177 ~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~~~~~-~~~~~l~ 255 (309)
+++ .++|||+|..+|+.|+++++.. ....+|+
T Consensus 164 vVr-----------------------------------------------~~~GHgig~~~He~p~ip~y~~~~~~~~l~ 196 (255)
T COG0024 164 VVR-----------------------------------------------NLTGHGIGRELHEEPSIPNYGKDGTGVRLK 196 (255)
T ss_pred Eee-----------------------------------------------cccCCccCcccCCCCeeccccCCCCCcccC
Confidence 887 8999999999999999999654 3347999
Q ss_pred CCcEEEEccccccCCceeEEec-CCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 256 PGMTFTIEPVLTNGNGQVTMLE-DGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 256 ~gmv~~iep~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
+||||+|||++..+...+.... ++|.+.+.|++..+|+|+||+||++|+++||.
T Consensus 197 ~Gmv~aIEPmi~~G~~~~~~~~~d~Wt~~t~d~~~~aq~EHTv~Vt~~g~eilT~ 251 (255)
T COG0024 197 EGMVFAIEPMINTGSGEVVEGPSDRWTLVTKDGSLSAQFEHTVIVTEDGCEILTL 251 (255)
T ss_pred CCCEEEEeeEEEcCCCceEecCCCCeEEEeCCCCEEeEEEEEEEEeCCCcEEeeC
Confidence 9999999999999887777777 99999999999999999999999999999984
No 9
>PRK09795 aminopeptidase; Provisional
Probab=100.00 E-value=7.7e-51 Score=380.31 Aligned_cols=226 Identities=24% Similarity=0.350 Sum_probs=206.4
Q ss_pred CCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCccc
Q psy9913 13 KSPEVPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVAC 92 (309)
Q Consensus 13 ~v~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~ 92 (309)
.+..+|+|||++||+.||+|+++++++++.+.+.++||+||.||++.++..+.++|++. .+|++++++|.|+..+
T Consensus 120 ~~~~lR~iKs~~Ei~~~r~a~~i~~~~~~~~~~~i~~G~tE~e~~~~~~~~~~~~G~~~-----~~f~~iv~sG~~~~~p 194 (361)
T PRK09795 120 TPDVLRQIKTPEEVEKIRLACGIADRGAEHIRRFIQAGMSEREIAAELEWFMRQQGAEK-----ASFDTIVASGWRGALP 194 (361)
T ss_pred cHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHCCCCc-----CCCCeEEEEecccccc
Confidence 47899999999999999999999999999999999999999999999999999999976 3588999999999999
Q ss_pred cCCCCCcccCCCCeEEEeEEEEECCEEeeeEEEEEeCC--CCH---HHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHH
Q psy9913 93 HGIPDSRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGE--VDA---SGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIE 167 (309)
Q Consensus 93 h~~p~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~--~~~---~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~ 167 (309)
|+.|++++|++||+|++|+|+.|+||++|++|||++|. +++ +++++|++++++++++++++|||++++||+++++
T Consensus 195 h~~~~~~~l~~gd~v~~d~g~~~~gY~sd~tRt~~~g~~~~~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~ 274 (361)
T PRK09795 195 HGKASDKIVAAGEFVTLDFGALYQGYCSDMTRTLLVNGEGVSAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAAR 274 (361)
T ss_pred CCCCCCceecCCCEEEEEeccccCCEeecceEEEEeCCcCCchhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 99999999999999999999999999999999999963 233 3789999999999999999999999999999999
Q ss_pred HHHHhCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCcccccC
Q psy9913 168 NVAKQNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIFHTK 247 (309)
Q Consensus 168 ~~~~~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~~~~ 247 (309)
+++++.|+ ++||. |.+|||+|+++||.|.+..
T Consensus 275 ~~~~~~g~-----------~~~~~-----------------------------------h~~GHgiGl~~he~p~i~~-- 306 (361)
T PRK09795 275 RVITEAGY-----------GDYFG-----------------------------------HNTGHAIGIEVHEDPRFSP-- 306 (361)
T ss_pred HHHHHcCC-----------CccCC-----------------------------------CCCCccCCccccCCCCcCC--
Confidence 99998854 45554 9999999999999998753
Q ss_pred CCCCCCccCCcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 248 NDYPGKMEPGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 248 ~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
+++.+|++||||++||++|.++. .|+|+||||+||++|+|+||.
T Consensus 307 -~~~~~l~~gmv~~iEpgiy~~~~-----------------~gvriEd~v~vt~~G~e~Lt~ 350 (361)
T PRK09795 307 -RDTTTLQPGMLLTVEPGIYLPGQ-----------------GGVRIEDVVLVTPQGAEVLYA 350 (361)
T ss_pred -CCCCCcCCCCEEEECCEEEeCCC-----------------CEEEEeeEEEECCCCcEeCcC
Confidence 56799999999999999996532 268999999999999999984
No 10
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-50 Score=381.75 Aligned_cols=232 Identities=28% Similarity=0.425 Sum_probs=213.3
Q ss_pred ccCCCCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeE
Q psy9913 5 EFASGKPGKSPEVPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSIC 84 (309)
Q Consensus 5 ~~~~~~~~~v~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~ 84 (309)
++++. +.+++++|++||+.||+.||+|+++++.++.++++.++||+||.||++.++..+.+.|++.. +|+++++
T Consensus 140 ~~~~~-~~~i~~lR~iKs~~EI~~ir~A~~i~~~a~~~~~~~~~~g~tE~ev~a~l~~~~~~~G~~~~-----sf~~iv~ 213 (384)
T COG0006 140 ELVDA-SDLVDRLRLIKSPAEIAKIRKAAEIADAALEAALEAIRPGMTEAEIAAELEYALRKGGAEGP-----SFDTIVA 213 (384)
T ss_pred EEecc-HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCcc-----CcCcEEe
Confidence 34555 57789999999999999999999999999999999999999999999999999999997642 5899999
Q ss_pred ecCCCccccCCCCCcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHH
Q psy9913 85 TSVNNVACHGIPDSRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGS 164 (309)
Q Consensus 85 ~g~~~~~~h~~p~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~ 164 (309)
+|.|+..+|+.|+++.+++||+|++|+|+.|+|||+|+||||++|+|+++|+++|+.++++++++++++|||++++||+.
T Consensus 214 ~G~n~a~pH~~~~~~~~~~gd~vliD~G~~~~gY~sDiTRT~~~G~~~~~~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~ 293 (384)
T COG0006 214 SGENAALPHYTPSDRKLRDGDLVLIDLGGVYNGYCSDITRTFPIGKPSDEQREIYEAVLEAQEAAIAAIRPGVTGGEVDA 293 (384)
T ss_pred ccccccCcCCCCCcccccCCCEEEEEeeeEECCccccceeEEecCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeecccccccc--ccccCCCc
Q psy9913 165 IIENVAKQNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIG--SYFHGPPD 242 (309)
Q Consensus 165 ~~~~~~~~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG--~~~~e~p~ 242 (309)
++++++.+.|+ +.+|. |.+|||+| +++||.|.
T Consensus 294 ~ar~~i~~~g~-----------~~~~~-----------------------------------h~~GHgvG~~l~vhE~p~ 327 (384)
T COG0006 294 AARQVLEKAGY-----------GLYFL-----------------------------------HGTGHGVGFVLDVHEHPQ 327 (384)
T ss_pred HHHHHHHhcCC-----------ccccc-----------------------------------CCccccCCCCcccCcCcc
Confidence 99999998754 44444 89999999 99999994
Q ss_pred -ccccCCCCCCCccCCcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecC
Q psy9913 243 -IFHTKNDYPGKMEPGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLT 308 (309)
Q Consensus 243 -i~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT 308 (309)
+. ++...+|+|||||++||++|.+. .+|+|+||+|+||++|+|+||
T Consensus 328 ~~~---~~~~~~L~~GMv~t~Epg~y~~g-----------------~~GirIEd~vlVte~G~e~LT 374 (384)
T COG0006 328 YLS---PGSDTTLEPGMVFSIEPGIYIPG-----------------GGGVRIEDTVLVTEDGFEVLT 374 (384)
T ss_pred ccC---CCCCccccCCcEEEeccccccCC-----------------CceEEEEEEEEEcCCCceecc
Confidence 53 46789999999999999988543 347899999999999999998
No 11
>KOG2738|consensus
Probab=100.00 E-value=1.2e-49 Score=343.97 Aligned_cols=245 Identities=54% Similarity=0.875 Sum_probs=234.1
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCccccCCCC
Q psy9913 18 PEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVACHGIPD 97 (309)
Q Consensus 18 R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~h~~p~ 97 (309)
-.|.++++|+.||+|++++.+.+..+...++||+|..||+..+.+.+.++|++|++++|.+||-.+|.|.|...+|+.|.
T Consensus 114 i~i~~~e~ie~mR~ac~LarevLd~Aa~~v~PgvTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNEviCHGIPD 193 (369)
T KOG2738|consen 114 IKILDPEGIEGMRKACRLAREVLDYAATLVRPGVTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNEVICHGIPD 193 (369)
T ss_pred eeccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhheeecCCCC
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhCCcee
Q psy9913 98 SRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQNKLRV 177 (309)
Q Consensus 98 ~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~g~~~ 177 (309)
.|+|++||+|.||+...++||++|..+||++|+.+++.+++.+..+++++.+++..|||+++.+|.+.+++.+.++||..
T Consensus 194 ~RpLedGDIvNiDVtvY~~GyHGDlneTffvG~Vde~~k~LVkvT~EcL~kaI~~~kpGv~freiG~iI~kha~~~g~sV 273 (369)
T KOG2738|consen 194 SRPLEDGDIVNIDVTVYLNGYHGDLNETFFVGNVDEKAKKLVKVTRECLEKAIAIVKPGVSFREIGNIIQKHATKNGYSV 273 (369)
T ss_pred cCcCCCCCEEeEEEEEEeccccCccccceEeeccCHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhcCcee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred cccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCcccccCCC-CCCCccC
Q psy9913 178 VPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIFHTKND-YPGKMEP 256 (309)
Q Consensus 178 ~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~~~~~~-~~~~l~~ 256 (309)
++ .++|||||.-+|-.|.++++..+ ...++++
T Consensus 274 Vr-----------------------------------------------~ycGHGig~~FH~~PnipHya~n~a~GvM~~ 306 (369)
T KOG2738|consen 274 VR-----------------------------------------------SYCGHGIGRVFHCAPNIPHYAKNKAPGVMKP 306 (369)
T ss_pred eh-----------------------------------------------hhhccccccccccCCCchhhcccCCcceeec
Confidence 77 88999999999999999998764 5689999
Q ss_pred CcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 257 GMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 257 gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
||+|+|||++..+...-.-++|.|+..+.||..++|+|+|+|||++|+|+||.
T Consensus 307 G~tFTIEPmit~G~~~d~tWPD~WT~vTaDG~~sAQFEhTlLVT~tG~EILT~ 359 (369)
T KOG2738|consen 307 GQTFTIEPMITIGTWEDITWPDDWTAVTADGKRSAQFEHTLLVTETGCEILTK 359 (369)
T ss_pred CceEEeeeeecccccccccCCCCceEEecCCceecceeeEEEEecccceehhc
Confidence 99999999999877665568999999999999999999999999999999984
No 12
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=1.3e-48 Score=345.33 Aligned_cols=237 Identities=54% Similarity=0.843 Sum_probs=217.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCccccCCCCCcccCCCC
Q psy9913 26 IRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVACHGIPDSRPLEDGD 105 (309)
Q Consensus 26 i~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~h~~p~~~~l~~gd 105 (309)
|+.||+|+++++++++++++.++||+||.||++.+.+.+.++|+.+.+..+..|+..+++|.|+..+|+.|++++|++||
T Consensus 1 I~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~l~~Gd 80 (238)
T cd01086 1 IEGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTSVNEVVCHGIPDDRVLKDGD 80 (238)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCcccccCCCCCcceecCCCCceeCCCCCCcccCCCC
Confidence 57899999999999999999999999999999999999999999876555566877788899999999999999999999
Q ss_pred eEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhCCceecccccccC
Q psy9913 106 IVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQNKLRVVPEILGHG 185 (309)
Q Consensus 106 ~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~g~~~~~~~~~hg 185 (309)
+|++|+|+.++||++|++|||++|+++++++++|+++.++++++++++|||++++||++++++++++.|+....
T Consensus 81 ~v~id~g~~~~GY~ad~~RT~~~G~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~G~~~~~------ 154 (238)
T cd01086 81 IVNIDVGVELDGYHGDSARTFIVGEVSEEAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIEKYAEKNGYSVVR------ 154 (238)
T ss_pred EEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcceec------
Confidence 99999999999999999999999999999999999999999999999999999999999999999999875322
Q ss_pred ccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCcccc-cCCCCCCCccCCcEEEEcc
Q psy9913 186 IGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIFH-TKNDYPGKMEPGMTFTIEP 264 (309)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~~-~~~~~~~~l~~gmv~~iep 264 (309)
+++|||+|+.+||.|.+.. ..++.+.+|++||||++||
T Consensus 155 -----------------------------------------~~~GHgiG~~~~e~p~~~~~~~~~~~~~le~Gmv~~iep 193 (238)
T cd01086 155 -----------------------------------------EFGGHGIGRKFHEEPQIPNYGRPGTGPKLKPGMVFTIEP 193 (238)
T ss_pred -----------------------------------------CccccCCCCccccCCCcCCccCCCCCCEecCCCEEEEee
Confidence 7899999999999998762 2345679999999999999
Q ss_pred ccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 265 VLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
++|.+...+...+++|++..+++.+++|+||||+||+||+|+||.
T Consensus 194 ~i~~~~~~~~~~~~~~~~~~~~g~~g~~~edtv~Vte~G~e~Lt~ 238 (238)
T cd01086 194 MINLGTYEVVTLPDGWTVVTKDGSLSAQFEHTVLITEDGPEILTL 238 (238)
T ss_pred EEECCCCceEECCCCCEEEcCCCCEEEeeeeEEEEcCCcceeCCC
Confidence 999887777778889998888999999999999999999999984
No 13
>PRK10879 proline aminopeptidase P II; Provisional
Probab=100.00 E-value=2.1e-49 Score=377.82 Aligned_cols=254 Identities=20% Similarity=0.277 Sum_probs=211.8
Q ss_pred CCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCcc
Q psy9913 12 GKSPEVPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVA 91 (309)
Q Consensus 12 ~~v~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~ 91 (309)
.++.++|+|||++||+.||+|++++.+++.++++.++||+||.||++.+...+.++|+.. .+|++++++|.|...
T Consensus 165 ~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~~pG~tE~ei~a~~~~~~~~~G~~~-----~~~~~iv~~G~na~~ 239 (438)
T PRK10879 165 PWVHEMRLFKSPEEIAVLRRAGEISALAHTRAMEKCRPGMFEYQLEGEIHHEFNRHGARY-----PSYNTIVGSGENGCI 239 (438)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCC-----CCCCcEEEEcCcccc
Confidence 457779999999999999999999999999999999999999999999999999999864 248888999999999
Q ss_pred ccCCCCCcccCCCCeEEEeEEEEECCEEeeeEEEEEe-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHH
Q psy9913 92 CHGIPDSRPLEDGDIVNVDVTVYLNGYHGDCSATFCV-GEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVA 170 (309)
Q Consensus 92 ~h~~p~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~v-G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~ 170 (309)
+||.|++++|++||+|++|+|+.++||++|++|||++ |+++++|+++|++++++++++++.+|||+++++|++++.+++
T Consensus 240 ~H~~~~~~~l~~GDlVliD~G~~~~GY~sDitRT~~v~G~~s~~q~~~y~~vl~a~~aai~~~kpG~~~~~v~~~~~~~~ 319 (438)
T PRK10879 240 LHYTENESEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTPAQREIYDIVLESLETSLRLYRPGTSIREVTGEVVRIM 319 (438)
T ss_pred ccCCCCccccCCCCEEEEEeCeEECCEEEEeEEEEEECCcCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 899999999999999999999999999999999999999876
Q ss_pred HhCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCcccccCCCC
Q psy9913 171 KQNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIFHTKNDY 250 (309)
Q Consensus 171 ~~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~~~~~~~ 250 (309)
.+. +...|+.+ |++.+...+.....+++|.+||++|+++|+.|.+. .+.
T Consensus 320 ~~~-------l~~~Gl~~---------------------~~~~~~~~~~~~~~~~~Hg~GH~iGldvHd~~~~~---~~~ 368 (438)
T PRK10879 320 VSG-------LVKLGILK---------------------GDVDQLIAENAHRPFFMHGLSHWLGLDVHDVGVYG---QDR 368 (438)
T ss_pred HHH-------HHHhCCcC---------------------CCHHHHHHhccCccccCCCCccccCcCcCcCCCcC---CCC
Confidence 542 11112211 11111111222234566999999999999988653 345
Q ss_pred CCCccCCcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 251 PGKMEPGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 251 ~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
+.+|++||||++||++|.+.. +........+|+|+||||+||++|+|+||.
T Consensus 369 ~~~L~~GmV~tvEPgiY~~~~--------~~~~~~~~~~GiRiED~VlVT~~G~e~LT~ 419 (438)
T PRK10879 369 SRILEPGMVLTVEPGLYIAPD--------ADVPEQYRGIGIRIEDDIVITETGNENLTA 419 (438)
T ss_pred CCcCCCCCEEEECCEEEECCC--------cCcccccCccEEEeccEEEECCCcCeEcCc
Confidence 689999999999999997532 111222344689999999999999999984
No 14
>PRK15173 peptidase; Provisional
Probab=100.00 E-value=1.2e-48 Score=359.26 Aligned_cols=233 Identities=20% Similarity=0.316 Sum_probs=203.6
Q ss_pred cccCCCCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCcee
Q psy9913 4 CEFASGKPGKSPEVPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSI 83 (309)
Q Consensus 4 ~~~~~~~~~~v~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v 83 (309)
+++++. +.+++++|+|||++||+.||+|+++++++++++.+.++||+||.||++.+...+.+.|.... ..| +++
T Consensus 80 ~~~~d~-~~~i~~lR~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~~G~tE~el~a~~~~~~~~~g~~~~----~~~-~~i 153 (323)
T PRK15173 80 VDFVDS-SSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSETHF----SRF-HLI 153 (323)
T ss_pred CeEEEh-HHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCC----CCC-cEE
Confidence 455555 46789999999999999999999999999999999999999999999999888887765431 123 346
Q ss_pred EecCCCccccCCCCCcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHH
Q psy9913 84 CTSVNNVACHGIPDSRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIG 163 (309)
Q Consensus 84 ~~g~~~~~~h~~p~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~ 163 (309)
++|.+ ..+|+.|+++++++||+|++|+|+.|+||++|++|||++|+++++++++|++++++++++++++|||++++||+
T Consensus 154 ~~G~~-~~~h~~~~~~~l~~Gd~V~iD~g~~~~GY~aDitRT~~vG~p~~~~~~~y~~v~ea~~~~~~~irPG~~~~dv~ 232 (323)
T PRK15173 154 SVGAD-FSPKLIPSNTKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVF 232 (323)
T ss_pred EECCC-CccCCCCCCCccCCCCEEEEEeCccCCCEeeeeEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHH
Confidence 66665 56799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccc--cccCCC
Q psy9913 164 SIIENVAKQNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGS--YFHGPP 241 (309)
Q Consensus 164 ~~~~~~~~~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~--~~~e~p 241 (309)
+++++++++.|+ .++++ |++|||+|+ .+||.|
T Consensus 233 ~a~~~~~~~~G~-----------~~~~~-----------------------------------~~~GHGiG~~lg~~E~P 266 (323)
T PRK15173 233 DSTMEVIKKSGL-----------PNYNR-----------------------------------GHLGHGNGVFLGLEESP 266 (323)
T ss_pred HHHHHHHHHcCC-----------ccccC-----------------------------------CCCCCcCCCCCCcCCCC
Confidence 999999998865 34443 789999996 789999
Q ss_pred cccccCCCCCCCccCCcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 242 DIFHTKNDYPGKMEPGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 242 ~i~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
.+.. ..+.+|++||||++||++|.+. .+++|+||||+||++|+|+||.
T Consensus 267 ~i~~---~~~~~Le~GMV~tiEPgiy~~g-----------------~ggvriEDtvlVTe~G~e~LT~ 314 (323)
T PRK15173 267 FVST---HATESFTSGMVLSLETPYYGYN-----------------LGSIMIEDMILINKEGIEFLSK 314 (323)
T ss_pred CCCC---CCCCccCCCCEEEECCEEEcCC-----------------CcEEEEeeEEEEcCCcceeCCC
Confidence 8854 4568999999999999998532 2368999999999999999984
No 15
>PRK14575 putative peptidase; Provisional
Probab=100.00 E-value=1.6e-47 Score=362.36 Aligned_cols=233 Identities=20% Similarity=0.302 Sum_probs=204.6
Q ss_pred cccCCCCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCcee
Q psy9913 4 CEFASGKPGKSPEVPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSI 83 (309)
Q Consensus 4 ~~~~~~~~~~v~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v 83 (309)
+++++. +.++.++|+|||++||+.||+|+++++++++++++.++||+||.||++.+.+.+.+.|.... .+.+++
T Consensus 163 ~~~~d~-~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~~-----~~~~~v 236 (406)
T PRK14575 163 VDFVDS-SSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSETHF-----SRFHLI 236 (406)
T ss_pred CeEEEc-HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCcC-----CcCceE
Confidence 445555 56788999999999999999999999999999999999999999999999988887766431 122456
Q ss_pred EecCCCccccCCCCCcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHH
Q psy9913 84 CTSVNNVACHGIPDSRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIG 163 (309)
Q Consensus 84 ~~g~~~~~~h~~p~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~ 163 (309)
.+|.+ ..+|+.|+++++++||+|.+|+|+.|+||++|++|||++|+++++++++|++++++++++++++|||++++||+
T Consensus 237 ~~G~~-~~~h~~~~~~~l~~Gd~v~iD~g~~~~GY~sditRT~~vG~~~~~~~~~~~~~~~a~~~~~~~~rpG~~~~dv~ 315 (406)
T PRK14575 237 SVGAD-FSPKLIPSNTKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVF 315 (406)
T ss_pred EECCC-cccCCCCCCCcCCCCCEEEEEeceEECCEeeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHH
Confidence 67766 56899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccc--cccCCC
Q psy9913 164 SIIENVAKQNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGS--YFHGPP 241 (309)
Q Consensus 164 ~~~~~~~~~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~--~~~e~p 241 (309)
+++++++++.|+ .+++. |++|||+|+ .+||.|
T Consensus 316 ~a~~~~~~~~G~-----------~~~~~-----------------------------------~~~GHGiG~~lg~~e~P 349 (406)
T PRK14575 316 DSTMEVIKKSGL-----------PNYNR-----------------------------------GHLGHGNGVFLGLEESP 349 (406)
T ss_pred HHHHHHHHHcCC-----------ccccC-----------------------------------CCCCCcccCCCCCccCC
Confidence 999999998865 34443 789999995 789999
Q ss_pred cccccCCCCCCCccCCcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 242 DIFHTKNDYPGKMEPGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 242 ~i~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
.+.. +.+.+|++||||++||++|.+. .+|+|+||||+||++|+|+||.
T Consensus 350 ~i~~---~~~~~Le~GMv~tiEpgiy~~g-----------------~gGvriEDtvlVT~~G~e~LT~ 397 (406)
T PRK14575 350 FVST---HATESFTSGMVLSLETPYYGYN-----------------LGSIMIEDMILINKEGIEFLSK 397 (406)
T ss_pred CCCC---CCCCCcCCCCEEEECCeeecCC-----------------CcEEEEEeEEEEcCCCcccCCC
Confidence 8864 5678999999999999998643 2368999999999999999984
No 16
>PRK14576 putative endopeptidase; Provisional
Probab=100.00 E-value=4.1e-47 Score=359.43 Aligned_cols=233 Identities=21% Similarity=0.300 Sum_probs=205.4
Q ss_pred cccCCCCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCcee
Q psy9913 4 CEFASGKPGKSPEVPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSI 83 (309)
Q Consensus 4 ~~~~~~~~~~v~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v 83 (309)
++++|. +.++.++|+|||++||+.||+|++++++++.++++.++||+||.||++.+...+.+.|.... .+.+++
T Consensus 162 ~~~vd~-~~~l~~lR~iKs~~EI~~~r~A~~i~~~~~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~~-----~~~~~v 235 (405)
T PRK14576 162 LKLVDS-TALFNEIRMIKSPWEIEHLRKSAEITEYGIASAAKKIRVGCTAAELTAAFKAAVMSFPETNF-----SRFNLI 235 (405)
T ss_pred CeEEEc-HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCcC-----CCCCEE
Confidence 455655 46789999999999999999999999999999999999999999999999999998875421 122567
Q ss_pred EecCCCccccCCCCCcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHH
Q psy9913 84 CTSVNNVACHGIPDSRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIG 163 (309)
Q Consensus 84 ~~g~~~~~~h~~p~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~ 163 (309)
++|.+ ..+|+.|+++++++||+|++|+|+.++||++|++|||++|+++++++++|+++.++++++++++|||++++||+
T Consensus 236 ~~G~~-~~~h~~~~~~~l~~Gd~v~~d~g~~~~GY~sd~tRT~~~G~p~~~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~ 314 (405)
T PRK14576 236 SVGDN-FSPKIIADTTPAKVGDLIKFDCGIDVAGYGADLARTFVLGEPDKLTQQIYDTIRTGHEHMLSMVAPGVKLKAVF 314 (405)
T ss_pred EECCc-ccCCCCCCCcccCCCCEEEEEeceeECCEEeeeeEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHH
Confidence 78877 56899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeecccccccc--ccccCCC
Q psy9913 164 SIIENVAKQNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIG--SYFHGPP 241 (309)
Q Consensus 164 ~~~~~~~~~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG--~~~~e~p 241 (309)
++++++++++|+. +|+. +++|||+| +.+||.|
T Consensus 315 ~a~~~~~~~~G~~-----------~~~~-----------------------------------~~~GHgiG~~l~~~e~P 348 (405)
T PRK14576 315 DSTMAVIKTSGLP-----------HYNR-----------------------------------GHLGHGDGVFLGLEEVP 348 (405)
T ss_pred HHHHHHHHHcCCc-----------cccC-----------------------------------CCCCCCCCCCCCcCcCC
Confidence 9999999998663 3333 78999999 7789999
Q ss_pred cccccCCCCCCCccCCcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 242 DIFHTKNDYPGKMEPGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 242 ~i~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
.+.+ +.+.+|++||||++||++|..+ ..|+++||||+||++|+|+||.
T Consensus 349 ~i~~---~~~~~Le~GMv~~vEp~~y~~g-----------------~ggvriEDtvlVTe~G~e~LT~ 396 (405)
T PRK14576 349 FVST---QATETFCPGMVLSLETPYYGIG-----------------VGSIMLEDMILITDSGFEFLSK 396 (405)
T ss_pred CcCC---CCCCccCCCCEEEECCceeecC-----------------CCEEEEeeEEEECCCccccCCC
Confidence 8643 5678999999999999888542 2368999999999999999984
No 17
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=100.00 E-value=2.1e-47 Score=360.24 Aligned_cols=231 Identities=19% Similarity=0.207 Sum_probs=200.4
Q ss_pred cccCCCCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHH----CCCccCCCCCCCC
Q psy9913 4 CEFASGKPGKSPEVPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIIN----NGAYPSPLNYKGY 79 (309)
Q Consensus 4 ~~~~~~~~~~v~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~----~G~~~~~~~~~~~ 79 (309)
+++++. ++++.++|+|||++||++||+|++|++++++++.+.++||+||.||++.+.....+ .|.. +.+|
T Consensus 143 ~~~~d~-~~~~~~lR~iKs~~EI~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~~~~g~~-----~~~~ 216 (391)
T TIGR02993 143 ARFVDA-TALVNWQRAVKSETEISYMRVAARIVEKMHQRIFERIEPGMRKCDLVADIYDAGIRGVDGFGGD-----YPAI 216 (391)
T ss_pred CEEEeh-HHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhhcccCcCCC-----cCCc
Confidence 455555 56889999999999999999999999999999999999999999999988655332 1221 1235
Q ss_pred CceeEecCCCccccCCCCCcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCch
Q psy9913 80 PKSICTSVNNVACHGIPDSRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYF 159 (309)
Q Consensus 80 ~~~v~~g~~~~~~h~~p~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~ 159 (309)
.+++++|.|+..+|+.|+++++++||+|++|+|+.|+||++|++|||++|+++++++++|+.++++++++++++|||+++
T Consensus 217 ~~iv~sG~~~a~pH~~~~~~~l~~gd~v~iD~g~~~~GY~sD~tRT~~vG~p~~~~~~~~~~~~~a~~~~i~~ikpG~~~ 296 (391)
T TIGR02993 217 VPLLPSGADASAPHLTWDDSPMKVGEGTFFEIAGCYKRYHCPLSRTVFLGKPTQAFLDAEKAVLEGMEAGLEAAKPGNTC 296 (391)
T ss_pred ccccccCccccCCCCCCCCCcccCCCEEEEEeeeecccCccceeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcH
Confidence 56677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccC
Q psy9913 160 STIGSIIENVAKQNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHG 239 (309)
Q Consensus 160 ~dv~~~~~~~~~~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e 239 (309)
+||+++++++++++|+.. . |.+|||+|+.+|+
T Consensus 297 ~dv~~~~~~~~~~~G~~~-~-----------------------------------------------h~~GhgiGl~~~~ 328 (391)
T TIGR02993 297 EDIANAFFAVLKKYGIHK-D-----------------------------------------------SRTGYPIGLSYPP 328 (391)
T ss_pred HHHHHHHHHHHHHcCCcc-C-----------------------------------------------CCceeeeccCcCC
Confidence 999999999999987631 0 7899999999864
Q ss_pred C-----CcccccCCCCCCCccCCcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 240 P-----PDIFHTKNDYPGKMEPGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 240 ~-----p~i~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
. |.+ .++++.+|++||||++||++|.+.. |+|+||||+||++|+|+||.
T Consensus 329 ~~~e~~~~l---~~~~~~~L~~GMv~tvEpgiy~~~~------------------Gvried~v~VT~~G~e~Lt~ 382 (391)
T TIGR02993 329 DWGERTMSL---RPGDNTVLKPGMTFHFMTGLWMEDW------------------GLEITESILITETGVECLSS 382 (391)
T ss_pred CCCCccccc---cCCCCceecCCCEEEEcceeEeCCC------------------CeEEeeEEEECCCcceeccc
Confidence 2 233 3466799999999999999996532 57899999999999999984
No 18
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=100.00 E-value=1.8e-46 Score=329.26 Aligned_cols=225 Identities=17% Similarity=0.265 Sum_probs=192.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCC-CCCCCCceeEecCCCccccCCCCCcccCCC
Q psy9913 26 IRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPL-NYKGYPKSICTSVNNVACHGIPDSRPLEDG 104 (309)
Q Consensus 26 i~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~-~~~~~~~~v~~g~~~~~~h~~p~~~~l~~g 104 (309)
|++||+|+++++++++++.+.++||+||.||++.+.+.+.+.|+..... .+..+.+++++|.|+..+|+.|++++|++|
T Consensus 1 I~~ir~Aa~i~d~~~~~~~~~i~pG~tE~ei~a~~~~~~~~~ga~~~~~~~~~~~~~~v~~G~~~~~~H~~~~~r~l~~G 80 (228)
T cd01090 1 IALIRHGARIADIGGAAVVEAIREGVPEYEVALAGTQAMVREIAKTFPEVELMDTWTWFQSGINTDGAHNPVTNRKVQRG 80 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccCCcccccCcceEEEeeccccccCCCCCCcccCCC
Confidence 5789999999999999999999999999999999999999988753211 111222468899999999999999999999
Q ss_pred CeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhCCceeccccccc
Q psy9913 105 DIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQNKLRVVPEILGH 184 (309)
Q Consensus 105 d~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~g~~~~~~~~~h 184 (309)
|+|++|+++.++||++|++|||++|+++++++++|+++.++++++++.+|||++++||+++++++++++|+.
T Consensus 81 D~v~~d~g~~~~GY~ad~~RT~~vG~~~~~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~G~~-------- 152 (228)
T cd01090 81 DILSLNCFPMIAGYYTALERTLFLDEVSDAHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREHDLL-------- 152 (228)
T ss_pred CEEEEEEeEEECCEeeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCC--------
Confidence 999999999999999999999999999999999999999999999999999999999999999999988654
Q ss_pred CccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCcc--cccCCCCCCCccCCcEEEE
Q psy9913 185 GIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDI--FHTKNDYPGKMEPGMTFTI 262 (309)
Q Consensus 185 g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i--~~~~~~~~~~l~~gmv~~i 262 (309)
+++. |.+|||+|+.+||.|.- .....+.+.+|++||||++
T Consensus 153 ---~~~~-----------------------------------~~~GHgiGl~~he~~~~~g~~~~~~~~~~Le~GMV~~i 194 (228)
T cd01090 153 ---RYRT-----------------------------------FGYGHSFGVLSHYYGREAGLELREDIDTVLEPGMVVSM 194 (228)
T ss_pred ---cccc-----------------------------------cccCcccccccccCCCccccccCCCCCCccCCCCEEEE
Confidence 3322 88999999999987631 1122356799999999999
Q ss_pred ccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 263 EPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 263 ep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
||++|.+.. .++..++|+||||+||++|+|+||-
T Consensus 195 EP~i~~~~~-------------~~g~gG~ried~v~Vt~~G~e~Lt~ 228 (228)
T cd01090 195 EPMIMLPEG-------------QPGAGGYREHDILVINENGAENITG 228 (228)
T ss_pred CCEEeeccc-------------CCCCcEEEeeeEEEECCCccccCcC
Confidence 999986421 0233478999999999999999983
No 19
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=100.00 E-value=1.9e-46 Score=332.69 Aligned_cols=242 Identities=26% Similarity=0.331 Sum_probs=199.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCccccCCCCCcccCCCC
Q psy9913 26 IRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVACHGIPDSRPLEDGD 105 (309)
Q Consensus 26 i~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~h~~p~~~~l~~gd 105 (309)
|++||+|+++++++++++.+.++||+||.||++.+.+.+.++|+++ +|++++++|.|+..+|+.|++++|++||
T Consensus 1 i~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~G~~~------~~~~~v~~g~~~~~~H~~~~~~~l~~Gd 74 (243)
T cd01087 1 IELMRKACDISAEAHRAAMKASRPGMSEYELEAEFEYEFRSRGARL------AYSYIVAAGSNAAILHYVHNDQPLKDGD 74 (243)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCCc------CCCCeEEECCCccccCCCcCCCcCCCCC
Confidence 5799999999999999999999999999999999999999999873 3778899999999999999999999999
Q ss_pred eEEEeEEEEECCEEeeeEEEEEe-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhCCceeccccccc
Q psy9913 106 IVNVDVTVYLNGYHGDCSATFCV-GEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQNKLRVVPEILGH 184 (309)
Q Consensus 106 ~v~iD~g~~~~Gy~~d~~Rt~~v-G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~g~~~~~~~~~h 184 (309)
+|++|+|+.|+||++|++|||++ |+++++++++|+++.++++++++.+|||++++||++++++++++.++. +
T Consensus 75 ~v~vD~g~~~~GY~ad~~Rt~~vgg~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~-------~ 147 (243)
T cd01087 75 LVLIDAGAEYGGYASDITRTFPVNGKFTDEQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKE-------L 147 (243)
T ss_pred EEEEEeCceECCEeeeeeEEEEeCCcCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHh-------c
Confidence 99999999999999999999999 689999999999999999999999999999999999999999876432 1
Q ss_pred CccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCcccccCCCCCCCccCCcEEEEcc
Q psy9913 185 GIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIFHTKNDYPGKMEPGMTFTIEP 264 (309)
Q Consensus 185 g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~~~~~~~~~~l~~gmv~~iep 264 (309)
|+.+ +...+.+.......+++|.+|||+|+.+||.|.+.. .++.+.+|++||||++||
T Consensus 148 g~~~---------------------~~~~~~~~~~~~~~~~~h~~GhgiGl~~~e~p~~~~-~~~~~~~l~~GMv~~iEp 205 (243)
T cd01087 148 GILK---------------------GDVDEIVESGAYAKFFPHGLGHYLGLDVHDVGGYLR-YLRRARPLEPGMVITIEP 205 (243)
T ss_pred Cccc---------------------CchHhhhhhhhhhhhcCCCCccccCcccccCccccc-cCCCCCCCCCCCEEEECC
Confidence 2110 000000000011123449999999999999997621 235679999999999999
Q ss_pred ccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 265 VLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
++|.+..... ..++.+.+++|+||||+||++|+|+||.
T Consensus 206 ~iy~~~~~~~-------~~~~~~~~g~~ied~v~Vt~~G~e~Lt~ 243 (243)
T cd01087 206 GIYFIPDLLD-------VPEYFRGGGIRIEDDVLVTEDGPENLTR 243 (243)
T ss_pred EEEeCCcccc-------cccccceeEEEeeeEEEEcCCcceeCcC
Confidence 9997652211 0112244689999999999999999995
No 20
>PRK13607 proline dipeptidase; Provisional
Probab=100.00 E-value=2.4e-46 Score=356.24 Aligned_cols=264 Identities=19% Similarity=0.192 Sum_probs=201.0
Q ss_pred CCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCcc
Q psy9913 12 GKSPEVPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVA 91 (309)
Q Consensus 12 ~~v~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~ 91 (309)
..+.++|+|||++||+.||+|++++.++++++++.++||+||.||++.+.... ..+... .+|++++++|.|+..
T Consensus 153 ~~l~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~tE~ei~~~~~~~~-~~~~~~-----~~y~~iva~G~naa~ 226 (443)
T PRK13607 153 DYLHYHRAYKTDYELACMREAQKIAVAGHRAAKEAFRAGMSEFDINLAYLTAT-GQRDND-----VPYGNIVALNEHAAV 226 (443)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh-CCCCcC-----CCCCcEEEecCcceE
Confidence 45678999999999999999999999999999999999999999988654432 222221 358899999999999
Q ss_pred ccCCCCCc-ccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHH
Q psy9913 92 CHGIPDSR-PLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVA 170 (309)
Q Consensus 92 ~h~~p~~~-~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~ 170 (309)
+||.|+++ .+++||+|++|+|+.++||++|++|||+ |+++++++++|+++.++++++++.+|||++++||+.++++++
T Consensus 227 ~H~~~~~~~~~~~Gd~vliD~Ga~~~GY~sDiTRTf~-g~~~~~~~~ly~~v~~aq~aai~~ikPG~~~~dv~~aa~~~i 305 (443)
T PRK13607 227 LHYTKLDHQAPAEMRSFLIDAGAEYNGYAADITRTYA-AKEDNDFAALIKDVNKEQLALIATMKPGVSYVDLHIQMHQRI 305 (443)
T ss_pred ecCCccCCCCCCCCCEEEEEeeEEECCEEecceEEEe-cCCCHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHH
Confidence 99999875 6899999999999999999999999999 888999999999999999999999999999999999998877
Q ss_pred HhCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCccccc----
Q psy9913 171 KQNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIFHT---- 246 (309)
Q Consensus 171 ~~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~~~---- 246 (309)
.+. +..+|+.+-. ...+.+.......++||.+||++|+++||.+.....
T Consensus 306 ~~~-------L~~~Gl~~g~--------------------~~~~~~~~g~~~~~f~HglGH~iGldvHd~~~~~~~~~~~ 358 (443)
T PRK13607 306 AKL-------LRKFQIVTGL--------------------SEEAMVEQGITSPFFPHGLGHPLGLQVHDVAGFMQDDRGT 358 (443)
T ss_pred HHH-------HHHcCCCCCC--------------------CHHHHHhCCCceEecCCCccCccCcccccCCCcccccccc
Confidence 541 1122222100 000001111112456799999999999997543110
Q ss_pred ---------CCCCCCCccCCcEEEEccccccCCceeEEecC-------Cc-eEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 247 ---------KNDYPGKMEPGMTFTIEPVLTNGNGQVTMLED-------GW-TIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 247 ---------~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
.-...++|++|||||+||++|++...+..+.. .| .+....+..|+|+||+|+||++|+|+||.
T Consensus 359 ~~~~~~~~~~l~~~~~L~~GmV~TvEPGiY~~~~ll~~~~~~~~~~~in~~~i~~~~~~GGvRIED~vlVT~~G~e~Lt~ 438 (443)
T PRK13607 359 HLAAPEKHPYLRCTRVLEPGMVLTIEPGLYFIDSLLAPLREGPFSKHFNWQKIDALKPFGGIRIEDNVVVHENGVENMTR 438 (443)
T ss_pred cccccccccccccCCcCCCCcEEEECCeeeeChhhhchhhhhhhhhhccHHHHHhhcCCCEEeecceEEEcCCCCeECCh
Confidence 01245899999999999999986421100000 01 11122345689999999999999999984
No 21
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=100.00 E-value=3.1e-43 Score=304.49 Aligned_cols=208 Identities=30% Similarity=0.444 Sum_probs=190.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCccccCCCCCcccCCCC
Q psy9913 26 IRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVACHGIPDSRPLEDGD 105 (309)
Q Consensus 26 i~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~h~~p~~~~l~~gd 105 (309)
|++||+|+++++++++++.+.++||+||.||++.+.+.+.++|++. .+|++++++|.|+..+|+.|+++++++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~-----~~~~~~v~~g~~~~~~h~~~~~~~l~~gd 75 (208)
T cd01092 1 IELLRKAARIADKAFEELLEFIKPGMTEREVAAELEYFMRKLGAEG-----PSFDTIVASGPNSALPHGVPSDRKIEEGD 75 (208)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC-----CCCCcEEEECccccccCCCCCCcCcCCCC
Confidence 5799999999999999999999999999999999999999999874 35889999999999999999999999999
Q ss_pred eEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhCCceecccccccC
Q psy9913 106 IVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQNKLRVVPEILGHG 185 (309)
Q Consensus 106 ~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~g~~~~~~~~~hg 185 (309)
+|++|+|+.++||++|++||+++|+++++++++|+++.++++.+++.+|||++++||++++++.++++|+.
T Consensus 76 ~v~id~g~~~~gy~~d~~RT~~~g~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~g~~--------- 146 (208)
T cd01092 76 LVLIDFGAIYDGYCSDITRTVAVGEPSDELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEAGYG--------- 146 (208)
T ss_pred EEEEEeeeeECCEeccceeEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCcc---------
Confidence 99999999999999999999999999999999999999999999999999999999999999999998753
Q ss_pred ccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCcccccCCCCCCCccCCcEEEEccc
Q psy9913 186 IGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIFHTKNDYPGKMEPGMTFTIEPV 265 (309)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~~~~~~~~~~l~~gmv~~iep~ 265 (309)
++|. |.+||++|+..||.|.+. ++.+.+|++||+|++||+
T Consensus 147 --~~~~-----------------------------------~~~Gh~iG~~~~e~p~i~---~~~~~~l~~gmv~~iep~ 186 (208)
T cd01092 147 --EYFI-----------------------------------HRTGHGVGLEVHEAPYIS---PGSDDVLEEGMVFTIEPG 186 (208)
T ss_pred --ccCC-----------------------------------CCCccccCcccCcCCCcC---CCCCCCcCCCCEEEECCe
Confidence 2332 889999999999999864 366799999999999999
Q ss_pred cccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCe
Q psy9913 266 LTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGY 304 (309)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~ 304 (309)
++.+. .+++++||||+||++|+
T Consensus 187 ~~~~~-----------------~~g~~~ed~v~vt~~g~ 208 (208)
T cd01092 187 IYIPG-----------------KGGVRIEDDVLVTEDGC 208 (208)
T ss_pred EEecC-----------------CCEEEeeeEEEECCCCC
Confidence 98532 23688999999999985
No 22
>KOG2414|consensus
Probab=100.00 E-value=6.4e-44 Score=320.35 Aligned_cols=252 Identities=22% Similarity=0.256 Sum_probs=218.4
Q ss_pred CCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCC
Q psy9913 9 GKPGKSPEVPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVN 88 (309)
Q Consensus 9 ~~~~~v~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~ 88 (309)
.++.++.++|.||||.|++.||+||.|+.+++-.++-.-|+...|..|.+.++.+++..|++. .+|||.|+.|.|
T Consensus 217 ~~~~li~~lRlIKSpaEl~~Mr~a~~I~sq~~~~~m~~sr~~~~E~~l~a~~eye~r~rGad~-----~AYpPVVAgG~n 291 (488)
T KOG2414|consen 217 PVSNLIERLRLIKSPAELELMREACNIASQTFSETMFGSRDFHNEAALSALLEYECRRRGADR-----LAYPPVVAGGKN 291 (488)
T ss_pred cHHHHHHHHHccCCHHHHHHHHHHhhhhhHHHHHHHhhccCCcchhhHhhhhhhheeecCccc-----cccCCeeecCcc
Confidence 345688999999999999999999999999999999999999999999999999999999986 479999999999
Q ss_pred CccccCCCCCcccCCCCeEEEeEEEEECCEEeeeEEEEEe-CCCCHHHHHHHHHHHHHHHHHHHHhcC--CCchhHHHHH
Q psy9913 89 NVACHGIPDSRPLEDGDIVNVDVTVYLNGYHGDCSATFCV-GEVDASGKFLVNVAQQALHAAISVVKP--GEYFSTIGSI 165 (309)
Q Consensus 89 ~~~~h~~p~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~v-G~~~~~~~~~~~~~~~a~~~~~~~lkp--G~~~~dv~~~ 165 (309)
+...||.-++..++++|+|++|.||.++||++|+||||++ |++++-|+++|++++..++.+++..+| |.+.++|+..
T Consensus 292 a~tIHY~~Nnq~l~d~emVLvDaGcelgGYvSDITRTWP~sGkFs~~Qr~LYeavL~vq~ecik~c~~~~g~sL~~l~~~ 371 (488)
T KOG2414|consen 292 ANTIHYVRNNQLLKDDEMVLVDAGCELGGYVSDITRTWPISGKFSDAQRDLYEAVLQVQEECIKYCKPSNGTSLSQLFER 371 (488)
T ss_pred cceEEEeecccccCCCcEEEEecCcccCceEccceeccCCCCccCcHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHH
Confidence 9999999999999999999999999999999999999999 999999999999999999999999999 9999999998
Q ss_pred HHHHHHhCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCcccc
Q psy9913 166 IENVAKQNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIFH 245 (309)
Q Consensus 166 ~~~~~~~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~~ 245 (309)
..+.+.+. +..-|+.+.++. +.-...++|||+.||-+|+++|+.|.++
T Consensus 372 s~~Ll~~~-------Lk~lGI~kt~~e------------------------e~~~~~klcPHhVgHyLGmDVHD~p~v~- 419 (488)
T KOG2414|consen 372 SNELLGQE-------LKELGIRKTDRE------------------------EMIQAEKLCPHHVGHYLGMDVHDCPTVS- 419 (488)
T ss_pred HHHHHHHH-------HHHhCcccchHH------------------------HHHhhhhcCCcccchhcCcccccCCCCC-
Confidence 88877653 223344333220 0014557899999999999999999885
Q ss_pred cCCCCCCCccCCcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 246 TKNDYPGKMEPGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 246 ~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
.+.+|+|||||||||++|.|+. |...+.=.+.|+||||.|+|++||+++||.
T Consensus 420 ----r~~pL~pg~ViTIEPGvYIP~d--------~d~P~~FrGIGiRIEDDV~i~edg~evLT~ 471 (488)
T KOG2414|consen 420 ----RDIPLQPGMVITIEPGVYIPED--------DDPPEEFRGIGIRIEDDVAIGEDGPEVLTA 471 (488)
T ss_pred ----CCccCCCCceEEecCceecCcc--------CCCchHhcCceEEeecceEeccCCceeehh
Confidence 3589999999999999997642 222222356789999999999999999983
No 23
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=100.00 E-value=2.8e-42 Score=304.69 Aligned_cols=229 Identities=20% Similarity=0.211 Sum_probs=193.2
Q ss_pred HHHHHHHHHHHHHHHHHHHH-----hccCC--CCHHHHHHHHHHHHHHCCCccCCCC----CCCCCceeEecCCC-cccc
Q psy9913 26 IRLMHESCKLARFVLDCIAE-----HIKVN--MTTNELDVFAHELIINNGAYPSPLN----YKGYPKSICTSVNN-VACH 93 (309)
Q Consensus 26 i~~~r~A~~i~~~~~~~~~~-----~i~pG--~te~el~~~~~~~~~~~G~~~~~~~----~~~~~~~v~~g~~~-~~~h 93 (309)
|+.+|+|++++..+|+..+. .|.+| +|+.+|+..++..+.+.+.....+. ..+|++++++|.|. ..+|
T Consensus 1 ~~~~~~a~~~~~~~~~~~~~~~~~~~id~~~~~t~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~y~~iv~sG~~~~~l~h 80 (243)
T cd01091 1 LNNIKKASDATVDVLKKFFVDEVEEIIDQEKKVTHSKLSDKVEKAIEDKKKYKAKLDPEQLDWCYPPIIQSGGNYDLLKS 80 (243)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHhCchhhhcCCCHHHcCcccCCeEeECcCcccCCC
Confidence 46899999999999986666 88999 9999999999999998874411111 24799999999999 7899
Q ss_pred CCCCCcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhC
Q psy9913 94 GIPDSRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQN 173 (309)
Q Consensus 94 ~~p~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~ 173 (309)
+.++++.+..|++|++|+|++|+|||+|++|||++| ++++|+++|++++++++++++.+|||++++||++++.+++++.
T Consensus 81 ~~~s~~~~~~~~~vl~d~G~~y~gY~sditRT~~v~-p~~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~~ 159 (243)
T cd01091 81 SSSSDKLLYHFGVIICSLGARYKSYCSNIARTFLID-PTSEQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKKK 159 (243)
T ss_pred CCCCccccCCCCEEEEEeCcccCCEeecceEEEEcC-CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999997 6899999999999999999999999999999999999999987
Q ss_pred CceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCcccccCCCCCCC
Q psy9913 174 KLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIFHTKNDYPGK 253 (309)
Q Consensus 174 g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~~~~~~~~~~ 253 (309)
+. ++.++|. |.+|||+|+++||.|.+. .++.+.+
T Consensus 160 ~~---------~~~~~~~-----------------------------------~~~GHgiGle~hE~~~~l--~~~~~~~ 193 (243)
T cd01091 160 KP---------ELEPNFT-----------------------------------KNLGFGIGLEFRESSLII--NAKNDRK 193 (243)
T ss_pred Ch---------hHHHhCc-----------------------------------CCcccccCcccccCcccc--CCCCCCC
Confidence 53 2233333 899999999999988543 2355789
Q ss_pred ccCCcEEEEcccccc-CCceeEEecCCceEEecCCCceeeeeEEEEEcCCCe-eecCC
Q psy9913 254 MEPGMTFTIEPVLTN-GNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGY-KVLTY 309 (309)
Q Consensus 254 l~~gmv~~iep~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~-e~LT~ 309 (309)
|++||||++||+++. +.. +....+.+.+++++||||+||++|+ ++||.
T Consensus 194 L~~GMvf~vepGi~~~~~~--------~~~~~~~~~~gv~ieDtV~Vt~~G~~~~LT~ 243 (243)
T cd01091 194 LKKGMVFNLSIGFSNLQNP--------EPKDKESKTYALLLSDTILVTEDEPAIVLTN 243 (243)
T ss_pred cCCCCEEEEeCCcccccCc--------cccCccCCeeEEEEEEEEEEcCCCCceecCC
Confidence 999999999999983 211 1111234567999999999999999 99985
No 24
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=100.00 E-value=8.5e-41 Score=312.57 Aligned_cols=245 Identities=22% Similarity=0.285 Sum_probs=204.0
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCC---CCCCCCCceeEecCCCccccC
Q psy9913 18 PEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSP---LNYKGYPKSICTSVNNVACHG 94 (309)
Q Consensus 18 R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~---~~~~~~~~~v~~g~~~~~~h~ 94 (309)
-.+|+++||+.||+|++|+.++++.+.+.++||+|+.||+..+++.+.+.+..... ....++++.+|+|.|+..+||
T Consensus 11 ~~i~~~~eI~~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~~~~~~~~~~~g~afpt~vSvN~~v~H~ 90 (389)
T TIGR00495 11 YSLSNPEVVTKYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAKIFKKEKEMEKGIAFPTCISVNNCVGHF 90 (389)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhhhhcccccccCCCCCCeEEecCCeeeCC
Confidence 47899999999999999999999999999999999999999999999886543110 012234444667899999999
Q ss_pred CC--C--CcccCCCCeEEEeEEEEECCEEeeeEEEEEeCC-----CCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHH
Q psy9913 95 IP--D--SRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGE-----VDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSI 165 (309)
Q Consensus 95 ~p--~--~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~-----~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~ 165 (309)
.| + +++|++||+|+||+|++++||++|++|||++|+ ++++++++++++++|++++++.+|||++++||.++
T Consensus 91 ~P~~~d~~~~Lk~GDvVkIDlG~~idGY~aD~arTv~vG~~~~~~~t~~~~~l~~aa~~A~~aai~~vkPG~~~~dI~~a 170 (389)
T TIGR00495 91 SPLKSDQDYILKEGDVVKIDLGCHIDGFIALVAHTFVVGVAQEEPVTGRKADVIAAAHLAAEAALRLVKPGNTNTQVTEA 170 (389)
T ss_pred CCCCCCCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHH
Confidence 99 3 478999999999999999999999999999995 46789999999999999999999999999999999
Q ss_pred HHHHHHhCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccC-CCcc-
Q psy9913 166 IENVAKQNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHG-PPDI- 243 (309)
Q Consensus 166 ~~~~~~~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e-~p~i- 243 (309)
++++++++||.+++ +++|||+|..+|+ .|.|
T Consensus 171 i~~v~~~~G~~~v~-----------------------------------------------~~~gH~igr~~~~g~~~Ii 203 (389)
T TIGR00495 171 INKVAHSYGCTPVE-----------------------------------------------GMLSHQLKQHVIDGEKVII 203 (389)
T ss_pred HHHHHHHcCCeecC-----------------------------------------------CceeecccceeccCCCeee
Confidence 99999999999887 6667777777765 5654
Q ss_pred cccCC-----CCCCCccCCcEEEEccccccCCceeEEecCCce-------------------------------------
Q psy9913 244 FHTKN-----DYPGKMEPGMTFTIEPVLTNGNGQVTMLEDGWT------------------------------------- 281 (309)
Q Consensus 244 ~~~~~-----~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~------------------------------------- 281 (309)
.++.. ..+.+|++||||+|||++..+.+.+...++.|.
T Consensus 204 ~~~~~~~~~~~~~~~le~gev~aIEp~vs~G~g~v~~~~~~~tiy~~~~~~~y~lk~~~sr~~l~ei~~~f~~~PF~~R~ 283 (389)
T TIGR00495 204 SNPSDSQKKDHDTAEFEENEVYAVDILVSTGEGKAKDADQRTTIYKRDPSKTYGLKMKASRAFFSEIERRFDAMPFTLRN 283 (389)
T ss_pred ecCCccccCCCCCCEecCCCEEEEeeeecCCCceEEECCCeeEEEEECCCCCcCCCCHHHHHHHHHHHHhCCCCCcchHH
Confidence 33221 235789999999999999887766654433222
Q ss_pred -------------------------EEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 282 -------------------------IVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 282 -------------------------~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
+.+++|.+.+|+|+||+|+++|+.+||.
T Consensus 284 l~~~~~~~~gl~e~~~~~~l~~ypvl~e~~g~~Vaqf~~Tv~v~~~g~~~~t~ 336 (389)
T TIGR00495 284 FEDEKRARMGLVECVKHELLQPYPVLYEKEGEFVAQFKFTVLLMPNGPMRITS 336 (389)
T ss_pred hcchhhHHHHHHHHHHCCCcccCCceEeeCCCeEEEEEEEEEECCCCcEEeCC
Confidence 3456788999999999999999999983
No 25
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=100.00 E-value=9.8e-41 Score=314.22 Aligned_cols=244 Identities=23% Similarity=0.316 Sum_probs=201.9
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHC----CCccCCCCCCCCCceeEecCCCccccC
Q psy9913 19 EVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINN----GAYPSPLNYKGYPKSICTSVNNVACHG 94 (309)
Q Consensus 19 ~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~----G~~~~~~~~~~~~~~v~~g~~~~~~h~ 94 (309)
..+|++||+.||+|++|+.++++.+.+.++||+|+.||+..++..+++. |+.. ..+||+ ++|.|++.+|+
T Consensus 151 ~~~s~~EI~~~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ie~~ir~~~~~~G~~~----g~aFPt--~vS~N~~aaH~ 224 (470)
T PTZ00053 151 EKLSEEQYQDLRRAAEVHRQVRRYAQSVIKPGVKLIDICERIESKSRELIEADGLKC----GWAFPT--GCSLNHCAAHY 224 (470)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHhcCCcc----cCCCCc--eeecCccccCC
Confidence 3479999999999999999999999999999999999999988877654 5432 246886 56899999999
Q ss_pred CCC---CcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHH
Q psy9913 95 IPD---SRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAK 171 (309)
Q Consensus 95 ~p~---~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~ 171 (309)
.|+ +++|++||+|+||+|++++||++|++||+++| ++++++++++++|++++++.+|||++++||.++++++++
T Consensus 225 tP~~gd~~vLk~GDvVkID~G~~vdGYiaD~ArTv~vg---~~~~~L~eAv~eA~~aaI~~~kpGv~~~dI~~AIqevie 301 (470)
T PTZ00053 225 TPNTGDKTVLTYDDVCKLDFGTHVNGRIIDCAFTVAFN---PKYDPLLQATKDATNTGIKEAGIDVRLSDIGAAIQEVIE 301 (470)
T ss_pred CCCCCCCcEecCCCeEEEEEeEEECCEEEeEEEEEEeC---HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 996 67899999999999999999999999999996 688999999999999999999999999999999999999
Q ss_pred hCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccc-cccCCCcccccCCCC
Q psy9913 172 QNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGS-YFHGPPDIFHTKNDY 250 (309)
Q Consensus 172 ~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~-~~~e~p~i~~~~~~~ 250 (309)
++|+... +++|. +..+.|++|||||+ .+|+.|.++.+..+.
T Consensus 302 s~G~e~~--------Gk~f~------------------------------~k~I~nltGHgIG~y~iHe~k~iP~v~~~~ 343 (470)
T PTZ00053 302 SYEVEIK--------GKTYP------------------------------IKSIRNLNGHSIGPYIIHGGKSVPIVKGGE 343 (470)
T ss_pred HcCCccc--------Ccccc------------------------------cccccCCcccCCCCccccCCCcCCeeCCCC
Confidence 9987421 12220 01122999999998 799977776665667
Q ss_pred CCCccCCcEEEEccccccCCceeEE--------ec-C-----------------------------Cc------------
Q psy9913 251 PGKMEPGMTFTIEPVLTNGNGQVTM--------LE-D-----------------------------GW------------ 280 (309)
Q Consensus 251 ~~~l~~gmv~~iep~~~~~~~~~~~--------~~-~-----------------------------~~------------ 280 (309)
..+|++||||+|||++..+.+.+.- .. + .|
T Consensus 344 ~~~LeeGmVfaIEPf~stG~G~v~~~~~~siY~~~~~~~~~~lk~~~ar~ll~~I~~~f~tlPF~~R~l~~~~~~~~~~g 423 (470)
T PTZ00053 344 NTRMEEGELFAIETFASTGRGYVNEDLECSHYMKDPGAEFVPLRLPKAKQLLKHINTNFGTLAFCRRWLDRLGQDRHLLA 423 (470)
T ss_pred CCEecCCCEEEEcceeeCCCCeEecCCCceeeeEcCcCCcCCCCCHHHHHHHHHHHHHCCCCCcchhhhhccchhHHHHH
Confidence 7899999999999998776554321 00 0 00
Q ss_pred --------------eEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 281 --------------TIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 281 --------------~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
.+++++|++.+|+|+||+|+++|.++||.
T Consensus 424 l~~lv~~giv~~Yp~L~e~~G~~VAQfehTvll~p~~~~vis~ 466 (470)
T PTZ00053 424 LKQLVDAGIVNPYPPLCDVRGSYTSQMEHTILLRPTCKEVLSR 466 (470)
T ss_pred HHHHHHCCCcccCCccCccCCCEEeEEEEEEEECCCCCEecCC
Confidence 13457889999999999999999999984
No 26
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=100.00 E-value=7.5e-41 Score=289.64 Aligned_cols=204 Identities=32% Similarity=0.467 Sum_probs=180.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHH-HHHCCCccCCCCCCCCCceeEecCCCccccCCCCCcccCCCC
Q psy9913 27 RLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHEL-IINNGAYPSPLNYKGYPKSICTSVNNVACHGIPDSRPLEDGD 105 (309)
Q Consensus 27 ~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~-~~~~G~~~~~~~~~~~~~~v~~g~~~~~~h~~p~~~~l~~gd 105 (309)
++||+|+++++++++++++.++||+||.||++.+.++ +.++|... .+|++++++|.|...+|+.|++++|++||
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~~g~~~-----~~~~~~~~~g~~~~~~~~~~~~~~l~~gd 75 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRRHGGEE-----PAFPPIVGSGPNTDLPHYTPTDRRLQEGD 75 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHHTTTTE-----ESSESEEEECCCCGETTTBCCSSBESTTE
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHcCCCc-----ccCCceEecCCcceecceeccceeeecCC
Confidence 5899999999999999999999999999999999998 67777554 25788899999999999999999999999
Q ss_pred eEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhCCc-eeccccccc
Q psy9913 106 IVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQNKL-RVVPEILGH 184 (309)
Q Consensus 106 ~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~g~-~~~~~~~~h 184 (309)
+|++|+++.|+||++|++||+++| ++++++++|+.++++++.+++.+|||++++||++++++.++++|+ ...
T Consensus 76 ~v~id~~~~~~gy~~d~~Rt~~~G-~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~~~~~------ 148 (207)
T PF00557_consen 76 IVIIDFGPRYDGYHADIARTFVVG-PTPEQRRAYEAAREALEAAIEALRPGVTGSDVYEAVREVLEEYGLEEPY------ 148 (207)
T ss_dssp EEEEEEEEEETTEEEEEEEEEESS-SHHHHHHHHHHHHHHHHHHHHH-STTSBHHHHHHHHHHHHHHTTEGEEB------
T ss_pred cceeeccceeeeeEeeeeeEEEEe-ecccccchhhhhHHHHHhHhhhcccccccchhhHHHHHHHHhhccccee------
Confidence 999999999999999999999999 899999999999999999999999999999999999999999987 322
Q ss_pred CccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCC-CcccccCCCCCCCccCCcEEEEc
Q psy9913 185 GIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGP-PDIFHTKNDYPGKMEPGMTFTIE 263 (309)
Q Consensus 185 g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~-p~i~~~~~~~~~~l~~gmv~~ie 263 (309)
++.+|||+|+.+|+. |.+.+ .+.+.+|++||+|++|
T Consensus 149 -----------------------------------------~~~~GH~iG~~~~~~~P~i~~--~~~~~~l~~gmv~~ie 185 (207)
T PF00557_consen 149 -----------------------------------------PHGLGHGIGLEFHEPGPNIAR--PGDDTVLEPGMVFAIE 185 (207)
T ss_dssp -----------------------------------------TSSSEEEESSSSSEEEEEESS--TTTSSB--TTBEEEEE
T ss_pred -----------------------------------------eecccccccccccccceeeec--ccccceecCCCceeEe
Confidence 289999999999987 88742 3578999999999999
Q ss_pred cccccCCceeEEecCCceEEecCCCceeeeeEEEEEcC
Q psy9913 264 PVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTY 301 (309)
Q Consensus 264 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~ 301 (309)
|++++.. +.+++++||||+||+
T Consensus 186 p~~~~~~----------------~~~g~~~ed~v~Vte 207 (207)
T PF00557_consen 186 PGLYFIP----------------GWGGVRFEDTVLVTE 207 (207)
T ss_dssp EEEEEET----------------TSEEEEEBEEEEEES
T ss_pred eeEEccC----------------CCcEEEEEEEEEECc
Confidence 9887321 223789999999996
No 27
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=100.00 E-value=7.2e-41 Score=292.59 Aligned_cols=210 Identities=16% Similarity=0.136 Sum_probs=180.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCC--CCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCccccCCCC---Cccc
Q psy9913 27 RLMHESCKLARFVLDCIAEHIKVN--MTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVACHGIPD---SRPL 101 (309)
Q Consensus 27 ~~~r~A~~i~~~~~~~~~~~i~pG--~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~h~~p~---~~~l 101 (309)
+.+|.+..+ .++++.+.+.++|| +||.||++.+++.+.+.|.... .+|++++++|.|+..+|+.|+ +++|
T Consensus 5 ~~~~~~~~~-~~~~~~~~~~i~~G~~~tE~eiaa~~~~~~~~~g~~~~----~~f~~~v~~g~n~~~~H~~p~~~~~r~l 79 (224)
T cd01085 5 AHIRDGVAL-VEFLAWLEQEVPKGETITELSAADKLEEFRRQQKGYVG----LSFDTISGFGPNGAIVHYSPTEESNRKI 79 (224)
T ss_pred HHHHHHHHH-HHHHHHHHHHhccCCCEeHHHHHHHHHHHHHHcCCCcC----CCcceEEEecCccCcCCCCcCcccCccc
Confidence 345666666 48899999999999 9999999999988877664321 358899999999999999998 8999
Q ss_pred CCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhc-CCCchhHHHHHHHHHHHhCCceeccc
Q psy9913 102 EDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVK-PGEYFSTIGSIIENVAKQNKLRVVPE 180 (309)
Q Consensus 102 ~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lk-pG~~~~dv~~~~~~~~~~~g~~~~~~ 180 (309)
++||+|++|+|+.++||++|++|||++|+++++++++|+.+++++.++++.++ ||+++.+|++++++.+.+.|+.
T Consensus 80 ~~GD~V~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~g~~---- 155 (224)
T cd01085 80 SPDGLYLIDSGGQYLDGTTDITRTVHLGEPTAEQKRDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKAGLD---- 155 (224)
T ss_pred CCCCEEEEEeCccCCCcccccEEeecCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCC----
Confidence 99999999999999999999999999999999999999999999999998884 9999999999999998877542
Q ss_pred ccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeecccccccc--ccccCCCcccccCCCCCCCccCCc
Q psy9913 181 ILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIG--SYFHGPPDIFHTKNDYPGKMEPGM 258 (309)
Q Consensus 181 ~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG--~~~~e~p~i~~~~~~~~~~l~~gm 258 (309)
| .|.+||||| +.+||.|.+. +..+.+.+|++||
T Consensus 156 ---------~-----------------------------------~h~~GHgIG~~l~~hE~P~i~-~~~~~~~~L~~Gm 190 (224)
T cd01085 156 ---------Y-----------------------------------GHGTGHGVGSFLNVHEGPQSI-SPAPNNVPLKAGM 190 (224)
T ss_pred ---------C-----------------------------------CCCCCCCCCCCCcCCCCCCcC-CcCCCCCCcCCCC
Confidence 1 188999999 6889999874 2335678999999
Q ss_pred EEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeec
Q psy9913 259 TFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVL 307 (309)
Q Consensus 259 v~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~L 307 (309)
||++||++|.+.. .++|+||+|+||++|+.-+
T Consensus 191 vftiEP~iy~~g~-----------------~gvried~v~Vt~~G~~~~ 222 (224)
T cd01085 191 ILSNEPGYYKEGK-----------------YGIRIENLVLVVEAETTEF 222 (224)
T ss_pred EEEECCEeEeCCC-----------------eEEEeeEEEEEeeCCcCCC
Confidence 9999999996432 3678999999999998543
No 28
>PRK08671 methionine aminopeptidase; Provisional
Probab=100.00 E-value=3.1e-40 Score=299.42 Aligned_cols=227 Identities=33% Similarity=0.492 Sum_probs=197.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCccccCCCC---Cccc
Q psy9913 25 QIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVACHGIPD---SRPL 101 (309)
Q Consensus 25 Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~h~~p~---~~~l 101 (309)
+|++||+|++|+.++++.+.+.++||+||.||++.++..+.+.|..+ +||+++ +.|+..+||.|+ +++|
T Consensus 1 ~i~~~r~A~~I~~~~~~~~~~~i~pG~se~ei~~~~~~~i~~~g~~~------afp~~v--s~n~~~~H~~p~~~d~~~l 72 (291)
T PRK08671 1 ELEKYLEAGKIASKVREEAAKLIKPGAKLLDVAEFVENRIRELGAKP------AFPCNI--SINEVAAHYTPSPGDERVF 72 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCcc------CCCCEE--eeCCCccCCCCCCCCCccc
Confidence 48999999999999999999999999999999999999999999865 377654 567778999986 6789
Q ss_pred CCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhCCceecccc
Q psy9913 102 EDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQNKLRVVPEI 181 (309)
Q Consensus 102 ~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~g~~~~~~~ 181 (309)
++||+|++|+|++++||++|++||+++| +++++++++++++++++++.+|||++++||+++++++++++|+..+.
T Consensus 73 ~~GDvV~iD~G~~~dGY~aD~arT~~vG---~~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~~G~~~~~-- 147 (291)
T PRK08671 73 PEGDVVKLDLGAHVDGYIADTAVTVDLG---GKYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRSYGFKPIR-- 147 (291)
T ss_pred CCCCEEEEEEeEEECCEEEEEEEEEEeC---hhHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCcccC--
Confidence 9999999999999999999999999998 47889999999999999999999999999999999999999886433
Q ss_pred cccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccc-cccCCCcccccCCCCCCCccCCcEE
Q psy9913 182 LGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGS-YFHGPPDIFHTKNDYPGKMEPGMTF 260 (309)
Q Consensus 182 ~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~-~~~e~p~i~~~~~~~~~~l~~gmv~ 260 (309)
+++|||+|+ .+|+.|.+++.....+.+|++||||
T Consensus 148 ---------------------------------------------~~~GHgiG~~~~he~p~ip~~~~~~~~~le~GmV~ 182 (291)
T PRK08671 148 ---------------------------------------------NLTGHGLERYELHAGPSIPNYDEGGGVKLEEGDVY 182 (291)
T ss_pred ---------------------------------------------CCcccCcCCCcccCCCccCccCCCCCceeCCCCEE
Confidence 789999997 6899998876666678999999999
Q ss_pred EEccccccCCceeE--------Eec--------------------------------C-------------------Cc-
Q psy9913 261 TIEPVLTNGNGQVT--------MLE--------------------------------D-------------------GW- 280 (309)
Q Consensus 261 ~iep~~~~~~~~~~--------~~~--------------------------------~-------------------~~- 280 (309)
++||++..+.+.+. .+. + +|
T Consensus 183 aIEp~~t~G~G~v~~~~~~~iy~~~~~~~~k~~~~r~~~~~i~~~~~~~pF~~r~l~~~~~~~~~~~~~~~~~~~~~~yp 262 (291)
T PRK08671 183 AIEPFATDGEGKVVEGPEVEIYSLLRNRPVRLPAARKLLEEIEEEYNTLPFAERWLEGLFGEDKLELRRLLKAGALYGYP 262 (291)
T ss_pred EEcceEECCCCeEecCCceEEEeecCCCCCCCHHHHHHHHHHHHHCCCCCcchHHhhccchhhHHHHHHHHHCCCcccCC
Confidence 99998876654432 110 0 00
Q ss_pred eEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 281 TIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 281 ~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
.+.++++.+.+|+|+||+|+++|++++|.
T Consensus 263 ~l~e~~~~~vaq~~~Tv~v~~~g~~~~t~ 291 (291)
T PRK08671 263 VLKEVKGGLVSQAEHTVIVTEDGCEVTTK 291 (291)
T ss_pred ccEecCCCEEEEEEEEEEECCCCcEEecC
Confidence 14567889999999999999999999984
No 29
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=100.00 E-value=1.5e-39 Score=295.19 Aligned_cols=229 Identities=29% Similarity=0.410 Sum_probs=195.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCccccCCCC---Cc
Q psy9913 23 ESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVACHGIPD---SR 99 (309)
Q Consensus 23 ~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~h~~p~---~~ 99 (309)
-+||++||+|++|+.++++.+.+.++||+|+.||++.++..+.+.|+.+ +||+.+ +.|+..+||.|. ++
T Consensus 2 ~~~i~~~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~~~g~~~------aFp~~v--s~n~~~~H~~p~~~d~~ 73 (295)
T TIGR00501 2 IERAEKWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIRELGAEP------AFPCNI--SINECAAHFTPKAGDKT 73 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC------CCCcce--ecCCEeeCCCCCCCcCc
Confidence 3789999999999999999999999999999999999999999999885 488754 578889999985 57
Q ss_pred ccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhCCceecc
Q psy9913 100 PLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQNKLRVVP 179 (309)
Q Consensus 100 ~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~g~~~~~ 179 (309)
+|++||+|++|+|++++||++|++||+++|+ .++++++++.+|++++++.+|||++++||+++++++++++|+..+.
T Consensus 74 ~l~~GDvV~iD~G~~~dGY~aD~arT~~vG~---~~~~l~~a~~~A~~aai~~~kPGv~~~dV~~ai~~vi~~~G~~~i~ 150 (295)
T TIGR00501 74 VFKDGDVVKLDLGAHVDGYIADTAITVDLGD---QYDNLVKAAKDALYTAIKEIRAGVRVGEIGKAIQEVIESYGVKPIS 150 (295)
T ss_pred cCCCCCEEEEEEeEEECCEEEEEEEEEEeCc---HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCeeec
Confidence 8999999999999999999999999999985 3789999999999999999999999999999999999999987544
Q ss_pred cccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccc-cccCCCcccccCCCCCCCccCCc
Q psy9913 180 EILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGS-YFHGPPDIFHTKNDYPGKMEPGM 258 (309)
Q Consensus 180 ~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~-~~~e~p~i~~~~~~~~~~l~~gm 258 (309)
+++|||+|. .+|+.+.++......+.+|++||
T Consensus 151 -----------------------------------------------~~~GHgig~~~~h~g~~ip~i~~~~~~~le~Gm 183 (295)
T TIGR00501 151 -----------------------------------------------NLTGHSMAPYRLHGGKSIPNVKERDTTKLEEGD 183 (295)
T ss_pred -----------------------------------------------CCCCcceecccccCCCccCeecCCCCCEeCCCC
Confidence 888999994 67877666554556678999999
Q ss_pred EEEEccccccCCceeEE------e--c--------------------------------C--------------------
Q psy9913 259 TFTIEPVLTNGNGQVTM------L--E--------------------------------D-------------------- 278 (309)
Q Consensus 259 v~~iep~~~~~~~~~~~------~--~--------------------------------~-------------------- 278 (309)
||++||++..+.+.+.. . . +
T Consensus 184 V~aIEP~~~~G~G~v~~~~~~~iy~~~~~~~~k~~~~r~~l~~i~~~~~~~pF~~r~l~~~~~~~~~~~l~~~~~~~~~~ 263 (295)
T TIGR00501 184 VVAIEPFATDGVGYVTDGGEVSIYAFLAERPVRLDSARNLLKTIDENYGTLPFARRWLDKLGDEKYLFALNNLIRHGLIY 263 (295)
T ss_pred EEEEceeEECCcCeEecCCCeEEEeECCCCCCCCHHHHHHHHHHHHHCCCCCcchhHhcccchhHHHHHHHHHHHCCCcc
Confidence 99999987665444310 0 0 0
Q ss_pred Cc-eEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 279 GW-TIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 279 ~~-~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
+| .+.+++|.+.+|+|+||+|+++|++++|.
T Consensus 264 ~yp~l~e~~g~~vaq~~~Tv~v~~~g~~~~t~ 295 (295)
T TIGR00501 264 DYPVLNEISGGYVAQWEHTILVEEHGKEVTTK 295 (295)
T ss_pred CCCccEeeCCCEEEEEEEEEEECCCccEEcCC
Confidence 00 14567889999999999999999999984
No 30
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=2.7e-39 Score=293.21 Aligned_cols=226 Identities=31% Similarity=0.437 Sum_probs=196.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCccccCCCCC---cccC
Q psy9913 26 IRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVACHGIPDS---RPLE 102 (309)
Q Consensus 26 i~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~h~~p~~---~~l~ 102 (309)
+++||+|++++.++++++.+.++||+||.||++.+++.+.+.|..+ +||+ ++|.|+..+||.|+. ++|+
T Consensus 1 ~~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~G~~~------afp~--~is~n~~~~H~~p~~~d~~~l~ 72 (291)
T cd01088 1 LEKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGAGP------AFPV--NLSINECAAHYTPNAGDDTVLK 72 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCC------CCCc--eeccCCEeeCCCCCCCCCcccC
Confidence 3689999999999999999999999999999999999999999765 3774 468899999999964 8899
Q ss_pred CCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhCCceeccccc
Q psy9913 103 DGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQNKLRVVPEIL 182 (309)
Q Consensus 103 ~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~g~~~~~~~~ 182 (309)
+||+|++|+|++++||++|++||+++|+ +++++++++++|++++++.+|||++++||+++++++++++|+..+.
T Consensus 73 ~GDvV~iD~G~~~dGY~sD~arT~~vg~---~~~~l~ea~~~A~~~ai~~ikPG~~~~dV~~ai~~~i~~~G~~~~~--- 146 (291)
T cd01088 73 EGDVVKLDFGAHVDGYIADSAFTVDFDP---KYDDLLEAAKEALNAAIKEAGPDVRLGEIGEAIEEVIESYGFKPIR--- 146 (291)
T ss_pred CCCEEEEEEEEEECCEEEEEEEEEecCh---hHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCEEee---
Confidence 9999999999999999999999999974 7889999999999999999999999999999999999999987544
Q ss_pred ccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccc-cccCCCcccccCCCCCCCccCCcEEE
Q psy9913 183 GHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGS-YFHGPPDIFHTKNDYPGKMEPGMTFT 261 (309)
Q Consensus 183 ~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~-~~~e~p~i~~~~~~~~~~l~~gmv~~ 261 (309)
+++|||+|. .+|+.|.++.+....+.+|++||||+
T Consensus 147 --------------------------------------------~~~GHgig~~~~h~~~~ip~~~~~~~~~le~gmV~a 182 (291)
T cd01088 147 --------------------------------------------NLTGHSIERYRLHAGKSIPNVKGGEGTRLEEGDVYA 182 (291)
T ss_pred --------------------------------------------cCCccCccCccccCCCccCccCCCCCCEeCCCCEEE
Confidence 889999995 68998877665556678999999999
Q ss_pred EccccccCCceeE--------Eec--------------------------------C--------------------Cce
Q psy9913 262 IEPVLTNGNGQVT--------MLE--------------------------------D--------------------GWT 281 (309)
Q Consensus 262 iep~~~~~~~~~~--------~~~--------------------------------~--------------------~~~ 281 (309)
|||++..+.+.+. .+. + +|.
T Consensus 183 IEp~~s~G~G~v~~~~~~~iy~~~~~~~~~~~~~r~~~~~i~~~~~~~pF~~r~l~~~~~~~~~~~~~~~~~~~~~~~y~ 262 (291)
T cd01088 183 IEPFATTGKGYVHDGPECSIYMLNRDKPLRLPRARKLLDVIYENFGTLPFARRWLDRLGETKLLMALKNLCKAGIVYPYP 262 (291)
T ss_pred EceeEECCCCeeecCCceEEEEEcCCCCCCCHHHHHHHHHHHHHCCCCCcChHHhhccchhhHHHHHHHHHHCCCcccCC
Confidence 9998876655531 110 0 010
Q ss_pred -EEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 282 -IVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 282 -~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
+.+++|.+.+|+|+||+|+++|++++|.
T Consensus 263 ~l~e~~g~~vaq~~~T~~v~~~g~~~~t~ 291 (291)
T cd01088 263 VLKEISGGYVAQFEHTIIVREDGKEVTTR 291 (291)
T ss_pred ccEeeCCCeEEEEEEEEEECCCCcEecCC
Confidence 4567899999999999999999999984
No 31
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=100.00 E-value=1.6e-39 Score=279.64 Aligned_cols=207 Identities=30% Similarity=0.473 Sum_probs=187.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCccccCCCCCcccCCCC
Q psy9913 26 IRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVACHGIPDSRPLEDGD 105 (309)
Q Consensus 26 i~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~h~~p~~~~l~~gd 105 (309)
|+.||+|+++++++++.+.+.++||+||.|+++.+.+.+.++|+.. +++++++++.|...+|+.|+++++++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~------~~~~~v~~g~~~~~~h~~~~~~~i~~gd 74 (207)
T cd01066 1 IARLRKAAEIAEAAMAAAAEAIRPGVTEAEVAAAIEQALRAAGGYP------AGPTIVGSGARTALPHYRPDDRRLQEGD 74 (207)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC------CCCcEEEECccccCcCCCCCCCCcCCCC
Confidence 5789999999999999999999999999999999999999999943 3777888888888999999999999999
Q ss_pred eEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhCCceecccccccC
Q psy9913 106 IVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQNKLRVVPEILGHG 185 (309)
Q Consensus 106 ~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~g~~~~~~~~~hg 185 (309)
+|++|+|+.++||++|++||+++|+++++++++++.+.++++.+++.+|||+++.||++++++.+++.|+.
T Consensus 75 ~v~~d~g~~~~gy~~d~~rt~~~g~~~~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~g~~--------- 145 (207)
T cd01066 75 LVLVDLGGVYDGYHADLTRTFVIGEPSDEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGLG--------- 145 (207)
T ss_pred EEEEEeceeECCCccceeceeEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCcc---------
Confidence 99999999999999999999999999999999999999999999999999999999999999999998763
Q ss_pred ccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCcccccCCCCCCCccCCcEEEEccc
Q psy9913 186 IGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIFHTKNDYPGKMEPGMTFTIEPV 265 (309)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~~~~~~~~~~l~~gmv~~iep~ 265 (309)
.++ .+.+||++|+..|+.|.+. .+.+.+|++||+|++||+
T Consensus 146 --~~~-----------------------------------~~~~Gh~iG~~~~e~~~~~---~~~~~~l~~gmv~~iep~ 185 (207)
T cd01066 146 --PNF-----------------------------------GHRTGHGIGLEIHEPPVLK---AGDDTVLEPGMVFAVEPG 185 (207)
T ss_pred --ccC-----------------------------------CCCCccccCcccCCCCCcC---CCCCCCcCCCCEEEECCE
Confidence 111 1899999999999999743 366789999999999999
Q ss_pred cccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCe
Q psy9913 266 LTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGY 304 (309)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~ 304 (309)
++.+. .+++++||+|+||++|+
T Consensus 186 ~~~~~-----------------~~g~~~ed~v~vt~~g~ 207 (207)
T cd01066 186 LYLPG-----------------GGGVRIEDTVLVTEDGP 207 (207)
T ss_pred EEECC-----------------CcEEEeeeEEEEeCCCC
Confidence 98653 23688999999999985
No 32
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=100.00 E-value=4.8e-39 Score=282.46 Aligned_cols=214 Identities=25% Similarity=0.313 Sum_probs=174.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCC--ccC-CCC--CCCCCceeEecCCCccccCCC----
Q psy9913 26 IRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGA--YPS-PLN--YKGYPKSICTSVNNVACHGIP---- 96 (309)
Q Consensus 26 i~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~--~~~-~~~--~~~~~~~v~~g~~~~~~h~~p---- 96 (309)
+++||+|++|++++++++.+.++||+||.||+..++..+.+... ... ... ..+|+++ ++.|+..+|+.|
T Consensus 1 ~~~~r~A~~I~~~~~~~~~~~i~pG~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~~--v~~n~~~~H~~p~~~~ 78 (228)
T cd01089 1 VTKYKTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTC--ISVNNCVCHFSPLKSD 78 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCeE--eccCceeecCCCCCCC
Confidence 46899999999999999999999999999999888888776322 111 011 2345544 456888999986
Q ss_pred CCcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCH-----HHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHH
Q psy9913 97 DSRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDA-----SGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAK 171 (309)
Q Consensus 97 ~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~-----~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~ 171 (309)
++++|++||+|++|+|+.|+||++|++|||++|++++ +++++++++.++++++++.+|||++++||+++++++++
T Consensus 79 ~~~~l~~Gd~v~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~~~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~~~ 158 (228)
T cd01089 79 ATYTLKDGDVVKIDLGCHIDGYIAVVAHTIVVGAEAETPVTGKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVIV 158 (228)
T ss_pred CCcccCCCCEEEEEEEEEECCEEEEEEEEEEeCCcCccccchHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHH
Confidence 6789999999999999999999999999999998774 89999999999999999999999999999999999999
Q ss_pred hCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCcccccCCCCC
Q psy9913 172 QNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIFHTKNDYP 251 (309)
Q Consensus 172 ~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~~~~~~~~ 251 (309)
++||.++.+.. .|.+||+++ .++.+. ...
T Consensus 159 ~~G~~~~~~~~-------------------------------------------~h~~g~~~~--~~~~~~------~~~ 187 (228)
T cd01089 159 DYGCTPVEGVL-------------------------------------------SHQLKRVVS--SGEGKA------KLV 187 (228)
T ss_pred HcCCEEecCcc-------------------------------------------ccCcCceEe--cCCCCc------cch
Confidence 99987665221 155555333 233221 125
Q ss_pred CCccCCcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 252 GKMEPGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 252 ~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
..|++||+|++||.++.+ +.+++++||||+||++|+|.||.
T Consensus 188 ~~l~~gmvf~~ep~~~~~-----------------g~~~~~~~~Tv~vt~~G~e~lt~ 228 (228)
T cd01089 188 ECVKHGLLFPYPVLYEKE-----------------GEVVAQFKLTVLLTPNGVTVLTG 228 (228)
T ss_pred hhccCCcccccceeEccC-----------------CCeEEEEEEEEEEcCCCCeeCCC
Confidence 789999999999999854 33468999999999999999984
No 33
>KOG2737|consensus
Probab=100.00 E-value=5.8e-40 Score=292.09 Aligned_cols=264 Identities=21% Similarity=0.254 Sum_probs=215.9
Q ss_pred CCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCC-ccCCCCCCCCCceeEecCCCcc
Q psy9913 13 KSPEVPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGA-YPSPLNYKGYPKSICTSVNNVA 91 (309)
Q Consensus 13 ~v~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~-~~~~~~~~~~~~~v~~g~~~~~ 91 (309)
.+.+.|.|||+.||+.+|.|++|+++++.++++.++||+.|+++.+.++...-.+|. .. .+|..+-++|.|+..
T Consensus 178 ~m~E~RviKs~~EieviRya~kISseaH~~vM~~~~pg~~Eyq~eslF~hh~y~~GGcRh-----~sYtcIc~sG~ns~v 252 (492)
T KOG2737|consen 178 ILAECRVIKSSLEIEVIRYANKISSEAHIEVMRAVRPGMKEYQLESLFLHHSYSYGGCRH-----LSYTCICASGDNSAV 252 (492)
T ss_pred HHhhheeeCCHHHHHHHHHHHhhccHHHHHHHHhCCchHhHHhHHHHHHHhhhccCCccc-----cccceeeecCCCcce
Confidence 577899999999999999999999999999999999999999999999999988876 44 368776678899999
Q ss_pred ccC----CCCCcccCCCCeEEEeEEEEECCEEeeeEEEEEe-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHH
Q psy9913 92 CHG----IPDSRPLEDGDIVNVDVTVYLNGYHGDCSATFCV-GEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSII 166 (309)
Q Consensus 92 ~h~----~p~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~v-G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~ 166 (309)
.|| .|+++.++.||++++|+|+.|.+|.||+|++|+. |+.+++|+.+|+++++++.++++.+|||+.+.|++...
T Consensus 253 LHYgha~apNd~~iqdgd~cLfDmGaey~~yaSDITcsFP~nGKFTadqk~VYnaVLda~navm~a~KpGv~W~Dmh~La 332 (492)
T KOG2737|consen 253 LHYGHAGAPNDRTIQDGDLCLFDMGAEYHFYASDITCSFPVNGKFTADQKLVYNAVLDASNAVMEAMKPGVWWVDMHKLA 332 (492)
T ss_pred eeccccCCCCCcccCCCCEEEEecCcceeeeecccceeccCCCccchhHHHHHHHHHHHHHHHHHhcCCCCccccHHHHH
Confidence 998 7999999999999999999999999999999999 99999999999999999999999999999999999988
Q ss_pred HHHHHhCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCccc-c
Q psy9913 167 ENVAKQNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIF-H 245 (309)
Q Consensus 167 ~~~~~~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~-~ 245 (309)
.+++-+. +...| +=.|++.+.++-+....+.||.+||-+|+++|+..--+ .
T Consensus 333 ~kvlle~-------laq~g---------------------Il~gdvd~m~~ar~~~vF~PHGLGH~lGlDvHDvGGyp~~ 384 (492)
T KOG2737|consen 333 EKVLLEH-------LAQMG---------------------ILKGDVDEMVEARLGAVFMPHGLGHFLGLDVHDVGGYPEG 384 (492)
T ss_pred HHHHHHH-------HHhcC---------------------ceeccHHHHHHhccCeeeccccccccccccccccCCCCCC
Confidence 8876542 11111 12355666666778888999999999999999643211 1
Q ss_pred cC---------CCCCCCccCCcEEEEccccccCCceeE-EecCCce--------EEecCCCceeeeeEEEEEcCCCeeec
Q psy9913 246 TK---------NDYPGKMEPGMTFTIEPVLTNGNGQVT-MLEDGWT--------IVTEDDSRTAQFEHTVLVTYDGYKVL 307 (309)
Q Consensus 246 ~~---------~~~~~~l~~gmv~~iep~~~~~~~~~~-~~~~~~~--------~~~~~~~~~~~~edtvlVt~~G~e~L 307 (309)
.. -+..+.|++||++++||+.|+-...+. .+.|+-. +....+..|+||||.|+||++|+|+|
T Consensus 385 ~~rp~~P~l~~LR~aR~L~e~MviTvEPGcYFi~~Ll~ealadp~~~~f~n~e~~~rfr~~GGVRIEdDv~vt~~G~enl 464 (492)
T KOG2737|consen 385 VERPDEPGLRSLRTARHLKEGMVITVEPGCYFIDFLLDEALADPARAEFLNREVLQRFRGFGGVRIEDDVVVTKSGIENL 464 (492)
T ss_pred CCCCCcchhhhhhhhhhhhcCcEEEecCChhHHHHHHHHHhcChHhhhhhhHHHHHHhhccCceEeeccEEEeccccccc
Confidence 10 123478999999999999997432210 0111111 11235778999999999999999999
Q ss_pred CC
Q psy9913 308 TY 309 (309)
Q Consensus 308 T~ 309 (309)
|.
T Consensus 465 t~ 466 (492)
T KOG2737|consen 465 TC 466 (492)
T ss_pred cC
Confidence 83
No 34
>KOG2775|consensus
Probab=99.94 E-value=6.9e-26 Score=196.73 Aligned_cols=267 Identities=22% Similarity=0.295 Sum_probs=216.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHH----HCCCccCCCCCCCCCceeEecCCCccccCCCC-
Q psy9913 23 ESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELII----NNGAYPSPLNYKGYPKSICTSVNNVACHGIPD- 97 (309)
Q Consensus 23 ~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~----~~G~~~~~~~~~~~~~~v~~g~~~~~~h~~p~- 97 (309)
.+.+.-+|+|+++..++-+.+.+.++||||..||+..++...+ +.|... +.+|| +..|.|.+..||.|+
T Consensus 82 ~~i~~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~a----Gi~FP--tG~SlN~cAAHyTpNa 155 (397)
T KOG2775|consen 82 SDIYQDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLNA----GIGFP--TGCSLNHCAAHYTPNA 155 (397)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhccccc----cccCC--CcccccchhhhcCCCC
Confidence 3457789999999999999999999999999999999988655 445443 34687 568999999999985
Q ss_pred --CcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhCC-
Q psy9913 98 --SRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQNK- 174 (309)
Q Consensus 98 --~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~g- 174 (309)
..+|+.+|+.+||+|.+.+|-..|++.|+.+ ++....++.+++++...+++.....++.+||.++++++++++-
T Consensus 156 Gd~tVLqydDV~KiDfGthi~GrIiDsAFTv~F---~p~~d~Ll~AvreaT~tGIkeaGiDvRlcdiG~aiqEVmeSyEv 232 (397)
T KOG2775|consen 156 GDKTVLKYDDVMKIDFGTHIDGRIIDSAFTVAF---NPKYDPLLAAVREATNTGIKEAGIDVRLCDIGEAIQEVMESYEV 232 (397)
T ss_pred CCceeeeecceEEEeccccccCeEeeeeeEEee---CccccHHHHHHHHHHhhhhhhcCceeeehhhhHHHHHHhhheEE
Confidence 3589999999999999999999999999988 5678899999999999999999999999999999999999876
Q ss_pred --------ceecccccccCcccc-ccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCcccc
Q psy9913 175 --------LRVVPEILGHGIGSY-FHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIFH 245 (309)
Q Consensus 175 --------~~~~~~~~~hg~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~~ 245 (309)
+.+++.+.+|.|++| +|+|.++..++++...+|++|++++++.+ ..+|.| .+|+.+..++
T Consensus 233 Ei~Gk~~~VKpIrnLnGHSI~~yrIH~gksVPiVkgge~trmee~e~yAIETF--------gSTGkG---~v~ddmecSH 301 (397)
T KOG2775|consen 233 EINGKTYQVKPIRNLNGHSIAQYRIHGGKSVPIVKGGEQTRMEEGEIYAIETF--------GSTGKG---YVHDDMECSH 301 (397)
T ss_pred EeCCceecceeccccCCCcccceEeecCcccceecCCcceeecCCeeEEEEee--------ccCCcc---eecCCcccch
Confidence 467888999999999 89999999999999999999999998887 777766 3778888888
Q ss_pred cCCCCCC-----CccC--C---------cEEEEccccc--cCC----------ceeEEecCCceEEecCCCceeeeeEEE
Q psy9913 246 TKNDYPG-----KMEP--G---------MTFTIEPVLT--NGN----------GQVTMLEDGWTIVTEDDSRTAQFEHTV 297 (309)
Q Consensus 246 ~~~~~~~-----~l~~--g---------mv~~iep~~~--~~~----------~~~~~~~~~~~~~~~~~~~~~~~edtv 297 (309)
|..+.+. .|+. + -++.+-+-.- .+. +..+++.+..++++.+|+|.+++|+||
T Consensus 302 ymkn~~~~~vplrl~~~K~ll~~I~knfgTLaFcrR~lDrlGetKyLmAlk~Lc~~Giv~pyPPLcDi~G~ytAQfEHTI 381 (397)
T KOG2775|consen 302 YMKNFELGHVPLRLQRSKGLLNTIDKNFGTLAFCRRWLDRLGETKYLMALKNLCDMGIVQPYPPLCDIKGSYTAQFEHTI 381 (397)
T ss_pred hhhhccccccccccHHHHHHHHHHhhccccccccHHHHHHhhhHHHHHHHHhhhhcccccCCCcccccCcceeeeeceee
Confidence 7544331 1110 1 1122211100 011 112345555667889999999999999
Q ss_pred EEcCCCeeecCC
Q psy9913 298 LVTYDGYKVLTY 309 (309)
Q Consensus 298 lVt~~G~e~LT~ 309 (309)
+..+.+.|++|.
T Consensus 382 ll~pt~KEVvsr 393 (397)
T KOG2775|consen 382 LLSPTGKEVVSR 393 (397)
T ss_pred Eecchhcchhcc
Confidence 999999999874
No 35
>KOG1189|consensus
Probab=99.92 E-value=1.2e-24 Score=208.04 Aligned_cols=237 Identities=21% Similarity=0.253 Sum_probs=188.0
Q ss_pred CCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHH-----hccCC--CCHHHHHHHHHHHHHHC----CCccCCCCCCCC
Q psy9913 11 PGKSPEVPEVKTESQIRLMHESCKLARFVLDCIAE-----HIKVN--MTTNELDVFAHELIINN----GAYPSPLNYKGY 79 (309)
Q Consensus 11 ~~~v~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~-----~i~pG--~te~el~~~~~~~~~~~----G~~~~~~~~~~~ 79 (309)
+..+..+-++|++.||+.+|+|+.++...|..++. .+..+ +|...|...++..+... |+.+..+ -+.|
T Consensus 128 s~~ls~l~avKDd~Ei~~irksa~~s~~vm~k~~~~~~~~aiD~ekkvthskLsD~~e~~I~~~k~s~~l~~~~~-d~cY 206 (960)
T KOG1189|consen 128 SLGLSKLFAVKDDEEIANIRKSAAASSAVMNKYLVDELVEAIDEEKKVTHSKLSDLMESAIEDKKYSPGLDPDLL-DMCY 206 (960)
T ss_pred hhhhhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHhhccccCcccCcccc-cccc
Confidence 44578899999999999999999999999984433 44454 57777877777777654 3333111 2469
Q ss_pred CceeEecCCCccccCC-CCCcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCc
Q psy9913 80 PKSICTSVNNVACHGI-PDSRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEY 158 (309)
Q Consensus 80 ~~~v~~g~~~~~~h~~-p~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~ 158 (309)
||++.+|++..+-... .++..| + +|++.+|++|++||++++||+.+ .|+.+++++|+.++.++++++..+|||++
T Consensus 207 ~PIiqSGg~ydlk~sa~s~~~~L--~-~I~cs~G~RynsYCSNv~RT~Li-dpssemq~nY~fLl~aqe~il~~lrpG~k 282 (960)
T KOG1189|consen 207 PPIIQSGGKYDLKPSAVSDDNHL--H-VILCSLGIRYNSYCSNVSRTYLI-DPSSEMQENYEFLLAAQEEILKLLRPGTK 282 (960)
T ss_pred ChhhhcCCccccccccccccccc--c-eEEeeccchhhhhhccccceeee-cchHHHHHHHHHHHHHHHHHHHhhcCCCc
Confidence 9999999887764333 455667 4 89999999999999999999999 57899999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeecccccccccccc
Q psy9913 159 FSTIGSIIENVAKQNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFH 238 (309)
Q Consensus 159 ~~dv~~~~~~~~~~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~ 238 (309)
.++||+++.+++++.+...++ .|. ..+|.|+|+++.
T Consensus 283 i~dVY~~~l~~v~k~~Pel~~---------~~~-----------------------------------k~lG~~iGlEFR 318 (960)
T KOG1189|consen 283 IGDVYEKALDYVEKNKPELVP---------NFT-----------------------------------KNLGFGIGLEFR 318 (960)
T ss_pred hhHHHHHHHHHHHhcCcchhh---------hhh-----------------------------------hhcccccceeee
Confidence 999999999999998665433 221 568999999999
Q ss_pred CCCcccccCCCCCCCccCCcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCe-eecCC
Q psy9913 239 GPPDIFHTKNDYPGKMEPGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGY-KVLTY 309 (309)
Q Consensus 239 e~p~i~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~-e~LT~ 309 (309)
|...+.+ ..++.+|++||+|.|..++..-. +. ...+.|++.+.|||+|+++++ ++||+
T Consensus 319 Essl~in--aKnd~~lk~gmvFni~lGf~nl~-------n~----~~~~~yaL~l~DTvlv~e~~p~~vLT~ 377 (960)
T KOG1189|consen 319 ESSLVIN--AKNDRVLKKGMVFNISLGFSNLT-------NP----ESKNSYALLLSDTVLVGEDPPAEVLTD 377 (960)
T ss_pred ccccccc--ccchhhhccCcEEEEeecccccc-------Cc----ccccchhhhccceeeecCCCcchhhcc
Confidence 9887754 36679999999999998876411 11 123458899999999999996 88884
No 36
>KOG2413|consensus
Probab=99.92 E-value=1.2e-24 Score=205.27 Aligned_cols=226 Identities=19% Similarity=0.187 Sum_probs=184.3
Q ss_pred CCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHh----ccCC--CCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeE
Q psy9913 11 PGKSPEVPEVKTESQIRLMHESCKLARFVLDCIAEH----IKVN--MTTNELDVFAHELIINNGAYPSPLNYKGYPKSIC 84 (309)
Q Consensus 11 ~~~v~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~----i~pG--~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~ 84 (309)
+..+..++++|++.|++.||.+----..|+...+.+ +..| +||.+++..+++.-+++..+.. .+|+++.+
T Consensus 298 ~Spi~~~kAiKN~~E~~gmr~shirD~~Alve~~~wle~~~~~g~~itE~~~A~kle~fR~~~~~fmg----lSFeTIS~ 373 (606)
T KOG2413|consen 298 PSPISRAKAIKNDDELKGMRNSHIRDGAALVEYFAWLEKELHKGYTITEYDAADKLEEFRSRQDHFMG----LSFETISS 373 (606)
T ss_pred cCHHHHHHHhcChHHhhhhhhcchhhHHHHHHHHHHHhhhhhcCcccchhhHHHHHHHHHHhhccccC----cCcceeec
Confidence 356778899999999999998755555555555554 4466 8999999999998777655432 46999875
Q ss_pred e-cCCCccccCCCC---CcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCch
Q psy9913 85 T-SVNNVACHGIPD---SRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKP-GEYF 159 (309)
Q Consensus 85 ~-g~~~~~~h~~p~---~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkp-G~~~ 159 (309)
+ |+|.++.||.|. ++.+.+..+.++|.|++|..-++|+|||+.+|+|++++++.|..++..+-++.+++-| |...
T Consensus 374 s~G~NgAviHYsP~~e~n~~i~~~kiyL~DSGaQY~DGTTDvTRT~HfgePs~eek~~yT~VLkGhi~la~~vFP~~t~g 453 (606)
T KOG2413|consen 374 SVGPNGAVIHYSPPAETNRIVSPDKIYLCDSGAQYLDGTTDVTRTVHFGEPTAEEKEAYTLVLKGHIALARAVFPKGTKG 453 (606)
T ss_pred cCCCCceeeecCCCccccceecCceEEEEccCcccccCccceeEEEecCCCCHHHHHHHHHHHHhhhHhhhcccCCCCCc
Confidence 5 999999999984 4589999999999999999999999999999999999999999999999999998886 6777
Q ss_pred hHHHHHHHHHHHhCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeecccccccccc--c
Q psy9913 160 STIGSIIENVAKQNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSY--F 237 (309)
Q Consensus 160 ~dv~~~~~~~~~~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~--~ 237 (309)
+.+...++..+.+.|.. +.|.+|||+|.. +
T Consensus 454 ~~lD~laR~~LW~~gLD------------------------------------------------y~HgTGHGVG~fLnV 485 (606)
T KOG2413|consen 454 SVLDALARSALWKAGLD------------------------------------------------YGHGTGHGVGSFLNV 485 (606)
T ss_pred chhHHHHHHHHHhhccc------------------------------------------------cCCCCCcccccceEe
Confidence 77888888888777642 229999999987 5
Q ss_pred cCCCcccccC-CCCCCCccCCcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCee
Q psy9913 238 HGPPDIFHTK-NDYPGKMEPGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYK 305 (309)
Q Consensus 238 ~e~p~i~~~~-~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e 305 (309)
||.|....+. -.+...|+.||++++||++|. ++.+|+|+|+.++|.+.+..
T Consensus 486 hE~P~~is~r~~~~~~~l~ag~~~s~EPGYY~-----------------dg~fGIRienv~~vvd~~~~ 537 (606)
T KOG2413|consen 486 HEGPIGIGYRPYSSNFPLQAGMVFSIEPGYYK-----------------DGEFGIRIENVVEVVDAGTK 537 (606)
T ss_pred ccCCceeeeeecCCCchhcCceEeccCCcccc-----------------cCcceEEEeeEEEEEecccc
Confidence 9998654444 345678999999999999993 56678999999999876643
No 37
>KOG2776|consensus
Probab=99.92 E-value=3.3e-24 Score=190.62 Aligned_cols=288 Identities=20% Similarity=0.266 Sum_probs=211.2
Q ss_pred CccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCC--CccCCCC---CCCCCceeEecCCCc
Q psy9913 16 EVPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNG--AYPSPLN---YKGYPKSICTSVNNV 90 (309)
Q Consensus 16 ~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G--~~~~~~~---~~~~~~~v~~g~~~~ 90 (309)
.-..+-++.-+..||.|++|+..+++.+.+.+.||.+..|||...+..+.+.- .+..... +.+|| +|++.|++
T Consensus 11 ~d~tia~~~vvtKYk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfP--T~Isvnnc 88 (398)
T KOG2776|consen 11 KDKTIANDSVVTKYKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKIYKKEKDFEKGIAFP--TSISVNNC 88 (398)
T ss_pred cccccccHHHHhhhhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHHHHhhhhhhhcccccc--ceecccce
Confidence 34557788899999999999999999999999999999999999888886552 2222111 23566 67899999
Q ss_pred cccCCC--C--CcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCC-----CHHHHHHHHHHHHHHHHHHHHhcCCCchhH
Q psy9913 91 ACHGIP--D--SRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEV-----DASGKFLVNVAQQALHAAISVVKPGEYFST 161 (309)
Q Consensus 91 ~~h~~p--~--~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~-----~~~~~~~~~~~~~a~~~~~~~lkpG~~~~d 161 (309)
.+||.| + +..|++||+|+||+|++++||.+.++.|++|+.. +....++..+++.|.+++++.+|||.+...
T Consensus 89 v~h~sPlksd~~~~Lk~GDvVKIdLG~HiDGfiA~vaHT~VV~~~~~~~vtG~kADvI~AAh~A~eaa~rllkpgn~n~~ 168 (398)
T KOG2776|consen 89 VCHFSPLKSDADYTLKEGDVVKIDLGVHIDGFIALVAHTIVVGPAPDTPVTGRKADVIAAAHLAAEAALRLLKPGNTNTQ 168 (398)
T ss_pred eeccCcCCCCCcccccCCCEEEEEeeeeeccceeeeeeeEEeccCCCCcccCchhHHHHHHHHHHHHHHHHhCCCCCCch
Confidence 999998 2 5689999999999999999999999999999753 356789999999999999999999999999
Q ss_pred HHHHHHHHHHhCCceecccccccCccccccCCCcccccCCCCC--CCCCCCceeehhhhccccceeeccccccccccccC
Q psy9913 162 IGSIIENVAKQNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYP--GKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHG 239 (309)
Q Consensus 162 v~~~~~~~~~~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e 239 (309)
|.+++.+.+.+++|.++.+++.|.+.+.|.+|+..+.-..+.. +.++.-+|.+++++.... + -.+|-|.+-+..+
T Consensus 169 vT~~i~k~aas~~c~pVegmlshql~~~~idGeKtIi~n~sdqq~~~~e~~~fe~~Evya~Di--~-~stg~~~~K~~~~ 245 (398)
T KOG2776|consen 169 VTRAIVKTAASYGCKPVEGMLSHQLKQHVIDGEKTIIQNPSDQQKKEHEKTEFEEHEVYAIDI--L-VSTGEGSPKEGDD 245 (398)
T ss_pred hhHHHHHHHHHhCCcccccchhHHHHhhhhcCCceEecCcchhhhccccccccccceeEEEEE--E-EecCCCccccccc
Confidence 9999999999999999999999999999999977655554444 455666777777763222 2 3445554433222
Q ss_pred C-CcccccCC--CCCCCcc-------------CCcEEEEccccccCCceeEE--------ecCCceEEecCCCceeeeeE
Q psy9913 240 P-PDIFHTKN--DYPGKME-------------PGMTFTIEPVLTNGNGQVTM--------LEDGWTIVTEDDSRTAQFEH 295 (309)
Q Consensus 240 ~-p~i~~~~~--~~~~~l~-------------~gmv~~iep~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~ed 295 (309)
. |.++.-.. .+..+|+ .-|.|++.-.-..-...++. +...-.++++++...++++.
T Consensus 246 ~~~t~y~kd~~~~y~LKlKaSR~~~seI~k~~g~~PF~~rs~~~e~r~rmGl~Ec~~~~ll~p~pVl~~kp~~~vaqfk~ 325 (398)
T KOG2776|consen 246 RAPTIYYKDESVSYMLKLKASRALLSEIKKKFGVMPFTLRSLEEEFRARLGLVECTNHGLLVPYPVLYEKPGEFVAQFKF 325 (398)
T ss_pred ccceeEEeccchHHHHHHHHHHHHHHHHHhhcCcccccccchhhHHHhhhhhHHhccCccccccceeecCCcchhhheee
Confidence 2 43322110 1111111 23555543211110111111 11222356788999999999
Q ss_pred EEEEcCCCeeecC
Q psy9913 296 TVLVTYDGYKVLT 308 (309)
Q Consensus 296 tvlVt~~G~e~LT 308 (309)
|||+.++|.-.||
T Consensus 326 TvllmPng~~~l~ 338 (398)
T KOG2776|consen 326 TVLLMPNGSLRLT 338 (398)
T ss_pred EEEeccCCCcccc
Confidence 9999999988776
No 38
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=99.74 E-value=3.4e-17 Score=154.68 Aligned_cols=240 Identities=17% Similarity=0.150 Sum_probs=174.0
Q ss_pred CCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHhcc----CC--CCHHHHHHHHHHHH------HHCCCccCCCC---
Q psy9913 11 PGKSPEVPEVKTESQIRLMHESCKLARFVLDCIAEHIK----VN--MTTNELDVFAHELI------INNGAYPSPLN--- 75 (309)
Q Consensus 11 ~~~v~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~----pG--~te~el~~~~~~~~------~~~G~~~~~~~--- 75 (309)
+.-+.++-.+|+.+|++.+|.+++.+...|......+. .+ +|...+...++..+ ......-+.++
T Consensus 161 slgLsk~~~~KD~~E~an~~~ss~~s~~~M~~~~~em~~~~D~~~kit~~KlsD~mes~iddv~f~q~~s~~l~~~~~d~ 240 (1001)
T COG5406 161 SLGLSKMFLTKDAEEIANCRASSAASSVLMRYFVKEMEMLWDGAFKITHGKLSDLMESLIDDVEFFQTKSLKLGDIDLDQ 240 (1001)
T ss_pred hhhhhHHhccccHHHHhhccccchHHHHHHHHHHHHHHHHHhhhhhhccchHHHHhhhhcchhhhhhhcCccccccchhh
Confidence 44567888999999999999999999988884443222 11 33344433333322 11111111111
Q ss_pred -CCCCCceeEecCCCccc-cCCCCCcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHh
Q psy9913 76 -YKGYPKSICTSVNNVAC-HGIPDSRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVV 153 (309)
Q Consensus 76 -~~~~~~~v~~g~~~~~~-h~~p~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~l 153 (309)
...|.|++.+|..--+. .....+..+ .||+|++.+|.+|+|||++++||+.+ .|+.+|++.|+.+..+++.++..+
T Consensus 241 lew~ytpiiqsg~~~Dl~psa~s~~~~l-~gd~vl~s~GiRYn~YCSn~~RT~l~-dp~~e~~~Ny~fl~~lQk~i~~~~ 318 (1001)
T COG5406 241 LEWCYTPIIQSGGSIDLTPSAFSFPMEL-TGDVVLLSIGIRYNGYCSNMSRTILT-DPDSEQQKNYEFLYMLQKYILGLV 318 (1001)
T ss_pred hhhhcchhhccCceeecccccccCchhh-cCceEEEEeeeeeccccccccceEEe-CCchHhhhhHHHHHHHHHHHHhhc
Confidence 12477788777654432 222344555 68999999999999999999999999 578999999999999999999999
Q ss_pred cCCCchhHHHHHHHHHHHhCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccc
Q psy9913 154 KPGEYFSTIGSIIENVAKQNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGI 233 (309)
Q Consensus 154 kpG~~~~dv~~~~~~~~~~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgi 233 (309)
|||....+||..+.+++.+.|.... +.|. ..+|-++
T Consensus 319 rpG~~~g~iY~~~~~yi~~~~pel~---------pnF~-----------------------------------~nvG~~i 354 (1001)
T COG5406 319 RPGTDSGIIYSEAEKYISSNGPELG---------PNFI-----------------------------------YNVGLMI 354 (1001)
T ss_pred CCCCCchhHHHHHHHHHHhcCCccC---------chHh-----------------------------------hhhhhhc
Confidence 9999999999999999999876543 3333 6789999
Q ss_pred cccccCCCcccccCCCCCCCccCCcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 234 GSYFHGPPDIFHTKNDYPGKMEPGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 234 G~~~~e~p~i~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
|+++.+.-.+.+. ..+++||.||+|.+..++.. +.++. .+..|++.+-||+-|+-+-+.++|+
T Consensus 355 giefR~s~~~~nv--kn~r~lq~g~~fnis~gf~n-------l~~~~----~~Nnyal~l~dt~qi~ls~p~~~t~ 417 (1001)
T COG5406 355 GIEFRSSQKPFNV--KNGRVLQAGCIFNISLGFGN-------LINPH----PKNNYALLLIDTEQISLSNPIVFTD 417 (1001)
T ss_pred cccccccccceec--cCCceeccccEEEEeecccc-------cCCCC----cccchhhhhccceEeecCCceeccc
Confidence 9998887766654 44599999999999887653 11111 1244788899999998888888774
No 39
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=97.30 E-value=0.0062 Score=51.63 Aligned_cols=102 Identities=22% Similarity=0.213 Sum_probs=73.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCccccCCCCCcccCCCCe
Q psy9913 27 RLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVACHGIPDSRPLEDGDI 106 (309)
Q Consensus 27 ~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~h~~p~~~~l~~gd~ 106 (309)
+.++++.+.+.+++..+++.++||++..||...+.+.+.+.|.........+.. +.........-...++.+|++|.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~g~~~~~~~~~Gh~--iG~~~~e~~~~~~~~~~~l~~gmv 179 (207)
T cd01066 102 DEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGLGPNFGHRTGHG--IGLEIHEPPVLKAGDDTVLEPGMV 179 (207)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCccccCCCCCccc--cCcccCCCCCcCCCCCCCcCCCCE
Confidence 577889999999999999999999999999999999999998742111111111 111111111101124678999999
Q ss_pred EEEeEEEEEC-CEEeeeEEEEEeCC
Q psy9913 107 VNVDVTVYLN-GYHGDCSATFCVGE 130 (309)
Q Consensus 107 v~iD~g~~~~-Gy~~d~~Rt~~vG~ 130 (309)
+.++.+.... ++..-+.-|+++.+
T Consensus 180 ~~iep~~~~~~~~g~~~ed~v~vt~ 204 (207)
T cd01066 180 FAVEPGLYLPGGGGVRIEDTVLVTE 204 (207)
T ss_pred EEECCEEEECCCcEEEeeeEEEEeC
Confidence 9999999877 58888888998853
No 40
>KOG2738|consensus
Probab=97.23 E-value=0.0019 Score=57.58 Aligned_cols=44 Identities=18% Similarity=0.231 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhCCce
Q psy9913 133 ASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQNKLR 176 (309)
Q Consensus 133 ~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~g~~ 176 (309)
+.+|++.+.++++++.+..++|||+|..||++++++.+-++|+=
T Consensus 123 e~mR~ac~LarevLd~Aa~~v~PgvTTdEiD~~VH~a~Ierg~Y 166 (369)
T KOG2738|consen 123 EGMRKACRLAREVLDYAATLVRPGVTTDEIDRAVHNAIIERGAY 166 (369)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHhcCCc
Confidence 46688999999999999999999999999999999999888763
No 41
>PLN03158 methionine aminopeptidase; Provisional
Probab=97.19 E-value=0.0033 Score=59.60 Aligned_cols=57 Identities=16% Similarity=0.209 Sum_probs=47.3
Q ss_pred EeeeEEEEEeCCCC--HHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhCCc
Q psy9913 119 HGDCSATFCVGEVD--ASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQNKL 175 (309)
Q Consensus 119 ~~d~~Rt~~vG~~~--~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~g~ 175 (309)
.+++.++..+..+. +.+|++.+.+.++++++++.+|||++-.||..++++.+.++|.
T Consensus 128 ~~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irpGvTe~EI~~~v~~~~~~~Ga 186 (396)
T PLN03158 128 NSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKPGVTTDEIDRVVHEATIAAGG 186 (396)
T ss_pred ccccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCC
Confidence 45666777775443 4667899999999999999999999999999999999888764
No 42
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=97.15 E-value=0.0098 Score=50.90 Aligned_cols=99 Identities=17% Similarity=0.193 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCccccCCC-CCcccCCCCe
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVACHGIP-DSRPLEDGDI 106 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~h~~p-~~~~l~~gd~ 106 (309)
.+|++.+.+.++++.+++.++||++-.||...+.+.+.+.|....+....++. +....... +...+ ++.+|++|.+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~g~~~~~~~~~Gh~--iG~~~~e~-p~i~~~~~~~l~~gmv 180 (208)
T cd01092 104 ELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEAGYGEYFIHRTGHG--VGLEVHEA-PYISPGSDDVLEEGMV 180 (208)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCccccCCCCCccc--cCcccCcC-CCcCCCCCCCcCCCCE
Confidence 56778889999999999999999999999999999999998753211111111 11111111 11122 5678999999
Q ss_pred EEEeEEEEECCE-EeeeEEEEEeC
Q psy9913 107 VNVDVTVYLNGY-HGDCSATFCVG 129 (309)
Q Consensus 107 v~iD~g~~~~Gy-~~d~~Rt~~vG 129 (309)
+.|+.+....|+ ..-+..|+.+.
T Consensus 181 ~~iep~~~~~~~~g~~~ed~v~vt 204 (208)
T cd01092 181 FTIEPGIYIPGKGGVRIEDDVLVT 204 (208)
T ss_pred EEECCeEEecCCCEEEeeeEEEEC
Confidence 999988876543 44456788774
No 43
>PRK05716 methionine aminopeptidase; Validated
Probab=96.98 E-value=0.013 Score=51.90 Aligned_cols=100 Identities=15% Similarity=0.165 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCC--ccccC-CC-CCcccCC
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNN--VACHG-IP-DSRPLED 103 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~--~~~h~-~p-~~~~l~~ 103 (309)
..|++.+++.++.+++++.++||++-.||...+++.+.++|.... ..+.++. +...... ...++ .+ ++.+|++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~~~~~~~~g~~~~-~~~~GHg--iG~~~~e~p~~~~~~~~~~~~~le~ 195 (252)
T PRK05716 119 EDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEAEGFSVV-REYCGHG--IGRKFHEEPQIPHYGAPGDGPVLKE 195 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCeee-cCccccc--cCCccCCCCccCcCCCCCCCCEecC
Confidence 456777888889999999999999999999999999999987642 1122222 2221111 11222 22 4678999
Q ss_pred CCeEEEeEEEEE------------------CCEEeeeEEEEEeCC
Q psy9913 104 GDIVNVDVTVYL------------------NGYHGDCSATFCVGE 130 (309)
Q Consensus 104 gd~v~iD~g~~~------------------~Gy~~d~~Rt~~vG~ 130 (309)
|.++.++-+... +.+..-+..|++|.+
T Consensus 196 Gmv~~vEp~i~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~Vt~ 240 (252)
T PRK05716 196 GMVFTIEPMINAGKREVKTLKDGWTVVTKDGSLSAQYEHTVAVTE 240 (252)
T ss_pred CCEEEEccEEEcCCCceEEcCCCCEEEccCCCcEEeeeeEEEEcC
Confidence 999999987754 335666777888854
No 44
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=96.81 E-value=0.012 Score=53.48 Aligned_cols=43 Identities=21% Similarity=0.215 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhCCc
Q psy9913 133 ASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQNKL 175 (309)
Q Consensus 133 ~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~g~ 175 (309)
+.++++.+.+.++++++++.++||++..||.+.+++.+.+.|.
T Consensus 2 ~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~G~ 44 (291)
T cd01088 2 EKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGA 44 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCC
Confidence 3578899999999999999999999999999999999998863
No 45
>PRK09795 aminopeptidase; Provisional
Probab=96.79 E-value=0.027 Score=52.82 Aligned_cols=104 Identities=16% Similarity=0.158 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCccccCCC-CCccc
Q psy9913 23 ESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVACHGIP-DSRPL 101 (309)
Q Consensus 23 ~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~h~~p-~~~~l 101 (309)
+++.+.++++.+++.++.+++++.++||++-.|+...+++.+.+.|....+....++. +...... .+...| ++.+|
T Consensus 236 ~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~~~~~~~g~~~~~~h~~GHg--iGl~~he-~p~i~~~~~~~l 312 (361)
T PRK09795 236 SAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARRVITEAGYGDYFGHNTGHA--IGIEVHE-DPRFSPRDTTTL 312 (361)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCccCCCCCCcc--CCccccC-CCCcCCCCCCCc
Confidence 5555568889999999999999999999999999999999999998754322112222 2222111 121223 46789
Q ss_pred CCCCeEEEeEEEEECCE-EeeeEEEEEeC
Q psy9913 102 EDGDIVNVDVTVYLNGY-HGDCSATFCVG 129 (309)
Q Consensus 102 ~~gd~v~iD~g~~~~Gy-~~d~~Rt~~vG 129 (309)
++|.++.|+-|....|. ..-+.-|++|.
T Consensus 313 ~~gmv~~iEpgiy~~~~~gvriEd~v~vt 341 (361)
T PRK09795 313 QPGMLLTVEPGIYLPGQGGVRIEDVVLVT 341 (361)
T ss_pred CCCCEEEECCEEEeCCCCEEEEeeEEEEC
Confidence 99999999999876553 34456688884
No 46
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=96.77 E-value=0.03 Score=49.10 Aligned_cols=100 Identities=14% Similarity=0.010 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCccccC-----C-CCCccc
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVACHG-----I-PDSRPL 101 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~h~-----~-p~~~~l 101 (309)
..|++.+++.++++++++.++||++-.|+.+.+++.+.++|.........++ .+....+.. +|. . -++.+|
T Consensus 110 ~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~G~~~~~~~~~GH--giGl~~he~-~~~~g~~~~~~~~~~L 186 (228)
T cd01090 110 AHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREHDLLRYRTFGYGH--SFGVLSHYY-GREAGLELREDIDTVL 186 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCcccccccCc--ccccccccC-CCccccccCCCCCCcc
Confidence 3677888999999999999999999999999999999999875432111111 122221111 111 1 135789
Q ss_pred CCCCeEEEeEEEEEC----C-EEeeeEEEEEeCC
Q psy9913 102 EDGDIVNVDVTVYLN----G-YHGDCSATFCVGE 130 (309)
Q Consensus 102 ~~gd~v~iD~g~~~~----G-y~~d~~Rt~~vG~ 130 (309)
++|.++.++-+..+. | ...-+..|+.|.+
T Consensus 187 e~GMV~~iEP~i~~~~~~~g~gG~ried~v~Vt~ 220 (228)
T cd01090 187 EPGMVVSMEPMIMLPEGQPGAGGYREHDILVINE 220 (228)
T ss_pred CCCCEEEECCEEeecccCCCCcEEEeeeEEEECC
Confidence 999999999988763 2 2333667888853
No 47
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=96.75 E-value=0.035 Score=49.10 Aligned_cols=100 Identities=12% Similarity=0.052 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCc--cccCC-C-CCcccCC
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNV--ACHGI-P-DSRPLED 103 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~--~~h~~-p-~~~~l~~ 103 (309)
..|++.+++.++++++++.++||++-.|+...+++.+.+.|.... ..+.++. +....... .+.+. + ++.+|++
T Consensus 117 ~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~g~~~~-~~~~GHg--iG~~~~e~p~i~~~~~~~~~~~l~~ 193 (247)
T TIGR00500 117 EAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAKGFSVV-REYCGHG--IGRKFHEEPQIPNYGKKFTNVRLKE 193 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEec-cCccCCc--cCcccCCCCccCCcCcCCCCCEecC
Confidence 356777888888999999999999999999999999999987542 1122222 22221111 12221 2 3678999
Q ss_pred CCeEEEeEEEEE------------------CCEEeeeEEEEEeCC
Q psy9913 104 GDIVNVDVTVYL------------------NGYHGDCSATFCVGE 130 (309)
Q Consensus 104 gd~v~iD~g~~~------------------~Gy~~d~~Rt~~vG~ 130 (309)
|.++.++-+..+ +++..-+..|+.|.+
T Consensus 194 gmv~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~g~ried~v~Vt~ 238 (247)
T TIGR00500 194 GMVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSAQFEHTIVITD 238 (247)
T ss_pred CCEEEEeeEEEcCCCcEEECCCCCEEEccCCCeEEEEeEEEEEcC
Confidence 999999988765 235556677888843
No 48
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=96.72 E-value=0.037 Score=48.57 Aligned_cols=100 Identities=14% Similarity=0.130 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCC--ccc-cCCC-CCcccCC
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNN--VAC-HGIP-DSRPLED 103 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~--~~~-h~~p-~~~~l~~ 103 (309)
.+|++.+++.++.+++++.++||++-.|+...+++.+.+.|.... ..+.++. +...... ... +..+ ++.+|++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~G~~~~-~~~~GHg--iG~~~~e~p~~~~~~~~~~~~~le~ 185 (238)
T cd01086 109 EAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIEKYAEKNGYSVV-REFGGHG--IGRKFHEEPQIPNYGRPGTGPKLKP 185 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCccee-cCccccC--CCCccccCCCcCCccCCCCCCEecC
Confidence 456788888899999999999999999999999999999988531 1122222 1111111 111 1123 4678999
Q ss_pred CCeEEEeEEEEE------------------CCEEeeeEEEEEeCC
Q psy9913 104 GDIVNVDVTVYL------------------NGYHGDCSATFCVGE 130 (309)
Q Consensus 104 gd~v~iD~g~~~------------------~Gy~~d~~Rt~~vG~ 130 (309)
|.++.++-+..+ +.+..-+..|+.|.+
T Consensus 186 Gmv~~iep~i~~~~~~~~~~~~~~~~~~~~g~~g~~~edtv~Vte 230 (238)
T cd01086 186 GMVFTIEPMINLGTYEVVTLPDGWTVVTKDGSLSAQFEHTVLITE 230 (238)
T ss_pred CCEEEEeeEEECCCCceEECCCCCEEEcCCCCEEEeeeeEEEEcC
Confidence 999999988764 224455566888843
No 49
>PRK15173 peptidase; Provisional
Probab=96.69 E-value=0.029 Score=51.83 Aligned_cols=101 Identities=7% Similarity=0.029 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCccccCC-CCCcccCCCCe
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVACHGI-PDSRPLEDGDI 106 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~h~~-p~~~~l~~gd~ 106 (309)
..|++.+++.++.+++++.++||++-.++.....+.+.+.|....+....++...+..+... .+... .++.+|++|.+
T Consensus 203 ~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~~~~~G~~~~~~~~~GHGiG~~lg~~E-~P~i~~~~~~~Le~GMV 281 (323)
T PRK15173 203 ITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGHLGHGNGVFLGLEE-SPFVSTHATESFTSGMV 281 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCCcCCCCCCcCC-CCCCCCCCCCccCCCCE
Confidence 45778888999999999999999999999999999999998753221111111000012221 11111 24578999999
Q ss_pred EEEeEEEEECC-EEeeeEEEEEeC
Q psy9913 107 VNVDVTVYLNG-YHGDCSATFCVG 129 (309)
Q Consensus 107 v~iD~g~~~~G-y~~d~~Rt~~vG 129 (309)
+.+.-|....| +..-+..|+.|.
T Consensus 282 ~tiEPgiy~~g~ggvriEDtvlVT 305 (323)
T PRK15173 282 LSLETPYYGYNLGSIMIEDMILIN 305 (323)
T ss_pred EEECCEEEcCCCcEEEEeeEEEEc
Confidence 99999876433 335567788884
No 50
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=96.67 E-value=0.021 Score=50.63 Aligned_cols=101 Identities=16% Similarity=0.137 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCc--cCCCCCCCCCceeEecCCCccccCCC-CCcccCCC
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAY--PSPLNYKGYPKSICTSVNNVACHGIP-DSRPLEDG 104 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~--~~~~~~~~~~~~v~~g~~~~~~h~~p-~~~~l~~g 104 (309)
..|++.+++.++.+++++.++||++-.++...+.+.+.+.+.. ..+....++. +....+.....-.+ ++++|++|
T Consensus 120 ~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~~~~~~~~~~~~~~GHg--iGle~hE~~~~l~~~~~~~L~~G 197 (243)
T cd01091 120 EQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKKKKPELEPNFTKNLGFG--IGLEFRESSLIINAKNDRKLKKG 197 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHhChhHHHhCcCCcccc--cCcccccCccccCCCCCCCcCCC
Confidence 5667888889999999999999999999999999999887522 1111011222 22222221111123 45789999
Q ss_pred CeEEEeEEEE-E----------CCEEeeeEEEEEeCC
Q psy9913 105 DIVNVDVTVY-L----------NGYHGDCSATFCVGE 130 (309)
Q Consensus 105 d~v~iD~g~~-~----------~Gy~~d~~Rt~~vG~ 130 (309)
.++.+..|.. + +.|..-++.|+.|.+
T Consensus 198 Mvf~vepGi~~~~~~~~~~~~~~~~gv~ieDtV~Vt~ 234 (243)
T cd01091 198 MVFNLSIGFSNLQNPEPKDKESKTYALLLSDTILVTE 234 (243)
T ss_pred CEEEEeCCcccccCccccCccCCeeEEEEEEEEEEcC
Confidence 9999999986 3 257777888999954
No 51
>PRK14576 putative endopeptidase; Provisional
Probab=96.56 E-value=0.04 Score=52.60 Aligned_cols=101 Identities=8% Similarity=0.004 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCccccCCC-CCcccCCCCe
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVACHGIP-DSRPLEDGDI 106 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~h~~p-~~~~l~~gd~ 106 (309)
..+++.+++.++.+++++.++||++-.|+...+.+.+.+.|....+....++......+... .+...+ ++.+|++|.+
T Consensus 285 ~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~~~~~~~~G~~~~~~~~~GHgiG~~l~~~e-~P~i~~~~~~~Le~GMv 363 (405)
T PRK14576 285 LTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDSTMAVIKTSGLPHYNRGHLGHGDGVFLGLEE-VPFVSTQATETFCPGMV 363 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCCCCCCCCCcCc-CCCcCCCCCCccCCCCE
Confidence 46678888999999999999999999999999999999998754322222222110022222 222223 4578999999
Q ss_pred EEEeEEEEECC-EEeeeEEEEEeC
Q psy9913 107 VNVDVTVYLNG-YHGDCSATFCVG 129 (309)
Q Consensus 107 v~iD~g~~~~G-y~~d~~Rt~~vG 129 (309)
+.++.+....| ...-+..|+.|.
T Consensus 364 ~~vEp~~y~~g~ggvriEDtvlVT 387 (405)
T PRK14576 364 LSLETPYYGIGVGSIMLEDMILIT 387 (405)
T ss_pred EEECCceeecCCCEEEEeeEEEEC
Confidence 99997765444 234466788884
No 52
>PRK14575 putative peptidase; Provisional
Probab=96.51 E-value=0.04 Score=52.61 Aligned_cols=100 Identities=7% Similarity=-0.001 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeE--ecCCCccccCC-CCCcccCCC
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSIC--TSVNNVACHGI-PDSRPLEDG 104 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~--~g~~~~~~h~~-p~~~~l~~g 104 (309)
..|++.+++.++.+++++.++||++-.++...+.+.+.+.|....+....++. ++ .|.... +... -++.+|++|
T Consensus 286 ~~~~~~~~~~~a~~~~~~~~rpG~~~~dv~~a~~~~~~~~G~~~~~~~~~GHG--iG~~lg~~e~-P~i~~~~~~~Le~G 362 (406)
T PRK14575 286 ITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGHLGHG--NGVFLGLEES-PFVSTHATESFTSG 362 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCCc--ccCCCCCccC-CCCCCCCCCCcCCC
Confidence 45677888889999999999999999999999999999998754321111111 21 122111 1111 245689999
Q ss_pred CeEEEeEEEEECC-EEeeeEEEEEeCC
Q psy9913 105 DIVNVDVTVYLNG-YHGDCSATFCVGE 130 (309)
Q Consensus 105 d~v~iD~g~~~~G-y~~d~~Rt~~vG~ 130 (309)
.++.+.-|....| +..-+..|+.|.+
T Consensus 363 Mv~tiEpgiy~~g~gGvriEDtvlVT~ 389 (406)
T PRK14575 363 MVLSLETPYYGYNLGSIMIEDMILINK 389 (406)
T ss_pred CEEEECCeeecCCCcEEEEEeEEEEcC
Confidence 9999999886544 3456777998843
No 53
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=96.49 E-value=0.037 Score=49.11 Aligned_cols=45 Identities=22% Similarity=0.230 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhCCcee
Q psy9913 133 ASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQNKLRV 177 (309)
Q Consensus 133 ~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~g~~~ 177 (309)
+.+|++-+.+.++++.+.+.++||++..||.+.+++++++.|..+
T Consensus 12 ek~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~p 56 (255)
T COG0024 12 EKMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYP 56 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCcee
Confidence 456778888888999999999999999999999999999877643
No 54
>PRK12897 methionine aminopeptidase; Reviewed
Probab=96.39 E-value=0.04 Score=48.85 Aligned_cols=100 Identities=12% Similarity=0.178 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCC--ccccCC-C-CCcccCC
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNN--VACHGI-P-DSRPLED 103 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~--~~~h~~-p-~~~~l~~ 103 (309)
..|++.+++..+++++++.++||++..|+...+++.+++.|.... ..+.++. +..+... ...++. + +..+|++
T Consensus 118 ~~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~~g~~~~-~~~~GHg--iGl~~hE~P~i~~~~~~~~~~~l~~ 194 (248)
T PRK12897 118 EAEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANEGFSVA-RDFTGHG--IGKEIHEEPAIFHFGKQGQGPELQE 194 (248)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHcCCccC-CCeEECc--cCCcccCCCccCCCCCCCCCCCcCC
Confidence 355666788888899999999999999999999999999887532 1111221 2222111 112222 2 3458999
Q ss_pred CCeEEEeEEEEE-----------------CC-EEeeeEEEEEeCC
Q psy9913 104 GDIVNVDVTVYL-----------------NG-YHGDCSATFCVGE 130 (309)
Q Consensus 104 gd~v~iD~g~~~-----------------~G-y~~d~~Rt~~vG~ 130 (309)
|.++.+.-+... +| +..-+..|+.|.+
T Consensus 195 Gmv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~r~edtv~Vt~ 239 (248)
T PRK12897 195 GMVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSAQYEHTIAITK 239 (248)
T ss_pred CCEEEECCeEecCCCceEECCCCcEEEcCCCCeEeecceEEEEeC
Confidence 999999988762 44 5667777888843
No 55
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=96.33 E-value=0.055 Score=51.37 Aligned_cols=98 Identities=14% Similarity=0.144 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCc----cccCCC-CCcccC
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNV----ACHGIP-DSRPLE 102 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~----~~h~~p-~~~~l~ 102 (309)
.++++.+++.++.+++++.++||++-.||...+++.+.+.|.... ...+++ +..+.... .+.-.| ++.+|+
T Consensus 271 ~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~~~~~~~G~~~~--h~~Ghg--iGl~~~~~~~e~~~~l~~~~~~~L~ 346 (391)
T TIGR02993 271 AFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAFFAVLKKYGIHKD--SRTGYP--IGLSYPPDWGERTMSLRPGDNTVLK 346 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccC--CCceee--eccCcCCCCCCccccccCCCCceec
Confidence 466788899999999999999999999999999999999887531 112232 22211100 011123 457899
Q ss_pred CCCeEEEeEEEEECCEEeeeEEEEEeC
Q psy9913 103 DGDIVNVDVTVYLNGYHGDCSATFCVG 129 (309)
Q Consensus 103 ~gd~v~iD~g~~~~Gy~~d~~Rt~~vG 129 (309)
+|.++.+.-|....|+..-+.-|++|.
T Consensus 347 ~GMv~tvEpgiy~~~~Gvried~v~VT 373 (391)
T TIGR02993 347 PGMTFHFMTGLWMEDWGLEITESILIT 373 (391)
T ss_pred CCCEEEEcceeEeCCCCeEEeeEEEEC
Confidence 999999999998877766777889884
No 56
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=96.29 E-value=0.048 Score=46.64 Aligned_cols=43 Identities=21% Similarity=0.273 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHH-HHhCCc
Q psy9913 133 ASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENV-AKQNKL 175 (309)
Q Consensus 133 ~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~-~~~~g~ 175 (309)
+.+|++.+.+.++.+++++.++||++-.||...+.+. +.+.|.
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~~g~ 44 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRRHGG 44 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHcCC
Confidence 3578899999999999999999999999999999997 666653
No 57
>PRK12318 methionine aminopeptidase; Provisional
Probab=96.21 E-value=0.082 Score=48.14 Aligned_cols=86 Identities=13% Similarity=0.177 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCC--ccccCCC-CCcccCCC
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNN--VACHGIP-DSRPLEDG 104 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~--~~~h~~p-~~~~l~~g 104 (309)
..|++.+++.++++++++.++||++..|+...+.+.+.+.|..... .+.++. +...... .++++.+ .+.+|++|
T Consensus 159 ~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~~~G~~~~~-~~~GHg--IGl~~hE~P~i~~~~~~~~~~L~~G 235 (291)
T PRK12318 159 IKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCADKYGFSVVD-QFVGHG--VGIKFHENPYVPHHRNSSKIPLAPG 235 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccCC-CcccCC--cCccccCCCcccCcCCCCCCEeCCC
Confidence 4567888889999999999999999999999999999998875321 122222 2222111 1222222 24579999
Q ss_pred CeEEEeEEEEEC
Q psy9913 105 DIVNVDVTVYLN 116 (309)
Q Consensus 105 d~v~iD~g~~~~ 116 (309)
.++.|.-+....
T Consensus 236 MV~~iEP~i~~~ 247 (291)
T PRK12318 236 MIFTIEPMINVG 247 (291)
T ss_pred CEEEECCEEEcC
Confidence 999999877654
No 58
>PRK12896 methionine aminopeptidase; Reviewed
Probab=96.18 E-value=0.1 Score=46.31 Aligned_cols=99 Identities=17% Similarity=0.183 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCc---cccC-CC-CCcccCC
Q psy9913 29 MHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNV---ACHG-IP-DSRPLED 103 (309)
Q Consensus 29 ~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~---~~h~-~p-~~~~l~~ 103 (309)
.+++.+.+.+++.++++.++||++-.++...+++.+.+.|.... ..+.++. +....... ..++ .+ ++.+|++
T Consensus 125 ~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~G~~~~-~~~~GHg--iG~~~he~p~~~~~~~~~~~~~~le~ 201 (255)
T PRK12896 125 AEKLCRVAEEALWAGIKQVKAGRPLNDIGRAIEDFAKKNGYSVV-RDLTGHG--VGRSLHEEPSVILTYTDPLPNRLLRP 201 (255)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEec-cCcccCC--cCcccccCCCccccCCCCCCCCEecC
Confidence 55677778888888899999999999999999999999987531 1112222 11111111 1111 13 3568999
Q ss_pred CCeEEEeEEEEE------------------CCEEeeeEEEEEeCC
Q psy9913 104 GDIVNVDVTVYL------------------NGYHGDCSATFCVGE 130 (309)
Q Consensus 104 gd~v~iD~g~~~------------------~Gy~~d~~Rt~~vG~ 130 (309)
|.++.++-+... +.+..-+..|++|.+
T Consensus 202 GmV~~iEp~i~~g~~~~~~~~~~~~~~~~~~~~~~~~edtv~vt~ 246 (255)
T PRK12896 202 GMTLAVEPFLNLGAKDAETLDDGWTVVTPDKSLSAQFEHTVVVTR 246 (255)
T ss_pred CcEEEEeceEEcCCCceEEcCCCCEEEecCCCeEEEEEEEEEEcC
Confidence 999999977642 345666778888854
No 59
>PRK08671 methionine aminopeptidase; Provisional
Probab=96.15 E-value=0.12 Score=47.02 Aligned_cols=97 Identities=14% Similarity=0.093 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCC-----CccccCCC-CCccc
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVN-----NVACHGIP-DSRPL 101 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~-----~~~~h~~p-~~~~l 101 (309)
..+++.+.+..+++++++.++||++-.|+...+++.+.+.|..+. .+..++. +|.. ...+...+ ++.+|
T Consensus 102 ~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~~G~~~~-~~~~GHg----iG~~~~he~p~ip~~~~~~~~~l 176 (291)
T PRK08671 102 KYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRSYGFKPI-RNLTGHG----LERYELHAGPSIPNYDEGGGVKL 176 (291)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccc-CCCcccC----cCCCcccCCCccCccCCCCCcee
Confidence 456788888889999999999999999999999999999988652 1111221 2211 11122222 35689
Q ss_pred CCCCeEEEeEEEE-ECCEEeeeEEEEEeC
Q psy9913 102 EDGDIVNVDVTVY-LNGYHGDCSATFCVG 129 (309)
Q Consensus 102 ~~gd~v~iD~g~~-~~Gy~~d~~Rt~~vG 129 (309)
++|+++.|+.... =.|+..+-.+|-...
T Consensus 177 e~GmV~aIEp~~t~G~G~v~~~~~~~iy~ 205 (291)
T PRK08671 177 EEGDVYAIEPFATDGEGKVVEGPEVEIYS 205 (291)
T ss_pred CCCCEEEEcceEECCCCeEecCCceEEEe
Confidence 9999999998754 356777777666553
No 60
>PRK07281 methionine aminopeptidase; Reviewed
Probab=96.12 E-value=0.073 Score=48.32 Aligned_cols=85 Identities=8% Similarity=0.055 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCc--cccC-CC-CCcccCC
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNV--ACHG-IP-DSRPLED 103 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~--~~h~-~p-~~~~l~~ 103 (309)
..|++.+++.++++++++.++||++-.+|...+++.+.+.|... ...+.++. +....... .+++ .+ .+.+|++
T Consensus 149 ~~~~l~~~~~ea~~~ai~~~kpG~~~~di~~a~~~~~~~~G~~~-~~~~~GHG--IGl~~hE~P~i~~~~~~~~~~~Le~ 225 (286)
T PRK07281 149 EVKNLMDVTKEAMYRGIEQAVVGNRIGDIGAAIQEYAESRGYGV-VRDLVGHG--VGPTMHEEPMVPNYGTAGRGLRLRE 225 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcc-CCCeeeee--CCCccCCCCcCCCcccCCCCCEECC
Confidence 46788899999999999999999999999999999999887653 21122221 11111111 1222 12 3468999
Q ss_pred CCeEEEeEEEEE
Q psy9913 104 GDIVNVDVTVYL 115 (309)
Q Consensus 104 gd~v~iD~g~~~ 115 (309)
|.++.|.-+...
T Consensus 226 GMV~tiEPgiy~ 237 (286)
T PRK07281 226 GMVLTIEPMINT 237 (286)
T ss_pred CCEEEECCeeEc
Confidence 999999998864
No 61
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=95.80 E-value=0.15 Score=44.85 Aligned_cols=101 Identities=14% Similarity=0.155 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCC----CccC-------C-CCCCCCCce----eEecCCCcc
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNG----AYPS-------P-LNYKGYPKS----ICTSVNNVA 91 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G----~~~~-------~-~~~~~~~~~----v~~g~~~~~ 91 (309)
..+++.+++.++++++++.++||++-.||...+.+.+.+.+ ..+. . .....|+.. +...... .
T Consensus 104 ~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~h~~GhgiGl~~~e-~ 182 (243)
T cd01087 104 EQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDVDEIVESGAYAKFFPHGLGHYLGLDVHD-V 182 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcccCchHhhhhhhhhhhhcCCCCccccCccccc-C
Confidence 45677788888999999999999999999999888887653 2110 0 000012211 2222221 2
Q ss_pred ccC--CC-CCcccCCCCeEEEeEEEEECC-----------EEeeeEEEEEeC
Q psy9913 92 CHG--IP-DSRPLEDGDIVNVDVTVYLNG-----------YHGDCSATFCVG 129 (309)
Q Consensus 92 ~h~--~p-~~~~l~~gd~v~iD~g~~~~G-----------y~~d~~Rt~~vG 129 (309)
+.. .+ ++.+|++|.++.+.-+....+ +..-+..|++|.
T Consensus 183 p~~~~~~~~~~~l~~GMv~~iEp~iy~~~~~~~~~~~~~~~g~~ied~v~Vt 234 (243)
T cd01087 183 GGYLRYLRRARPLEPGMVITIEPGIYFIPDLLDVPEYFRGGGIRIEDDVLVT 234 (243)
T ss_pred ccccccCCCCCCCCCCCEEEECCEEEeCCcccccccccceeEEEeeeEEEEc
Confidence 222 23 457899999999999987654 566677788884
No 62
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=95.52 E-value=0.22 Score=43.51 Aligned_cols=99 Identities=9% Similarity=0.099 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCC-CCCCCceeEecCCCccccCCCCCcccCCCC
Q psy9913 27 RLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLN-YKGYPKSICTSVNNVACHGIPDSRPLEDGD 105 (309)
Q Consensus 27 ~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~-~~~~~~~v~~g~~~~~~h~~p~~~~l~~gd 105 (309)
...+++.+++.++.+++++.++||++-.||...+++.+.+.|..+.... ...+...+..+.+.. .-...|++|.
T Consensus 120 ~~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~~~~~G~~~~~~~~~h~~g~~~~~~~~~~-----~~~~~l~~gm 194 (228)
T cd01089 120 GKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVIVDYGCTPVEGVLSHQLKRVVSSGEGKA-----KLVECVKHGL 194 (228)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHcCCEEecCccccCcCceEecCCCCc-----cchhhccCCc
Confidence 3567888888999999999999999999999999999999994221000 001111122221110 0145799999
Q ss_pred eEEEeEEEEECC-EEeeeEEEEEeCC
Q psy9913 106 IVNVDVTVYLNG-YHGDCSATFCVGE 130 (309)
Q Consensus 106 ~v~iD~g~~~~G-y~~d~~Rt~~vG~ 130 (309)
++.+..+....| +.+-+.-|+.+.+
T Consensus 195 vf~~ep~~~~~g~~~~~~~~Tv~vt~ 220 (228)
T cd01089 195 LFPYPVLYEKEGEVVAQFKLTVLLTP 220 (228)
T ss_pred ccccceeEccCCCeEEEEEEEEEEcC
Confidence 999999988766 7888889999953
No 63
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=95.16 E-value=0.26 Score=46.56 Aligned_cols=100 Identities=19% Similarity=0.181 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeE--ecCCCccc-cCCC-CCcccCC
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSIC--TSVNNVAC-HGIP-DSRPLED 103 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~--~g~~~~~~-h~~p-~~~~l~~ 103 (309)
..|+..++..++.+++++.++||++-.++....++.+.+.|....+.. ++...+. ..... .+ ...+ .+.+|++
T Consensus 263 ~~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar~~i~~~g~~~~~~h--~~GHgvG~~l~vhE-~p~~~~~~~~~~L~~ 339 (384)
T COG0006 263 EQREIYEAVLEAQEAAIAAIRPGVTGGEVDAAARQVLEKAGYGLYFLH--GTGHGVGFVLDVHE-HPQYLSPGSDTTLEP 339 (384)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHhcCCcccccC--CccccCCCCcccCc-CccccCCCCCccccC
Confidence 345777899999999999999999999999999999999766433221 1111111 11111 11 1112 4678999
Q ss_pred CCeEEEeEEEEE-CCEEeeeEEEEEeCC
Q psy9913 104 GDIVNVDVTVYL-NGYHGDCSATFCVGE 130 (309)
Q Consensus 104 gd~v~iD~g~~~-~Gy~~d~~Rt~~vG~ 130 (309)
|-++.++-|..+ +.+..-+..+++|.+
T Consensus 340 GMv~t~Epg~y~~g~~GirIEd~vlVte 367 (384)
T COG0006 340 GMVFSIEPGIYIPGGGGVRIEDTVLVTE 367 (384)
T ss_pred CcEEEeccccccCCCceEEEEEEEEEcC
Confidence 999999999764 558888999999954
No 64
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=94.81 E-value=0.21 Score=45.57 Aligned_cols=96 Identities=21% Similarity=0.208 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCce--eEecCCCccccCCC-CCcccCCCC
Q psy9913 29 MHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKS--ICTSVNNVACHGIP-DSRPLEDGD 105 (309)
Q Consensus 29 ~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~--v~~g~~~~~~h~~p-~~~~l~~gd 105 (309)
.+++.+++..+++++++.++||++-.||...+++.+.+.|..+. .+..++..- ..-+.. ..+...+ ++.++++|+
T Consensus 106 ~~~l~~a~~~A~~aai~~~kPGv~~~dV~~ai~~vi~~~G~~~i-~~~~GHgig~~~~h~g~-~ip~i~~~~~~~le~Gm 183 (295)
T TIGR00501 106 YDNLVKAAKDALYTAIKEIRAGVRVGEIGKAIQEVIESYGVKPI-SNLTGHSMAPYRLHGGK-SIPNVKERDTTKLEEGD 183 (295)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCeee-cCCCCcceecccccCCC-ccCeecCCCCCEeCCCC
Confidence 47788888999999999999999999999999999999998652 222222210 000000 1122222 356899999
Q ss_pred eEEEeEEEE-ECCEEeeeEEEE
Q psy9913 106 IVNVDVTVY-LNGYHGDCSATF 126 (309)
Q Consensus 106 ~v~iD~g~~-~~Gy~~d~~Rt~ 126 (309)
++.|+.... =.|+..+-.+|-
T Consensus 184 V~aIEP~~~~G~G~v~~~~~~~ 205 (295)
T TIGR00501 184 VVAIEPFATDGVGYVTDGGEVS 205 (295)
T ss_pred EEEEceeEECCcCeEecCCCeE
Confidence 999997654 346666655543
No 65
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=94.79 E-value=0.32 Score=46.21 Aligned_cols=41 Identities=15% Similarity=0.192 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhCC
Q psy9913 134 SGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQNK 174 (309)
Q Consensus 134 ~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~g 174 (309)
.++++-+.+..+++.+++.++||++..||.+.+++.+++.+
T Consensus 21 ~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~ 61 (389)
T TIGR00495 21 KYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEET 61 (389)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhh
Confidence 45677778888888999999999999999999999998864
No 66
>PRK10879 proline aminopeptidase P II; Provisional
Probab=93.32 E-value=1.4 Score=42.45 Aligned_cols=101 Identities=12% Similarity=0.103 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHH----HHCCCccCCC-------C-CCCCCceeE--ecCCC-cccc
Q psy9913 29 MHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELI----INNGAYPSPL-------N-YKGYPKSIC--TSVNN-VACH 93 (309)
Q Consensus 29 ~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~----~~~G~~~~~~-------~-~~~~~~~v~--~g~~~-~~~h 93 (309)
.|++.+++.++.+++++.++||++-.++...+.+.+ .+.|..+... . ...|+..++ .|..- ..++
T Consensus 284 q~~~y~~vl~a~~aai~~~kpG~~~~~v~~~~~~~~~~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iGldvHd~~~ 363 (438)
T PRK10879 284 QREIYDIVLESLETSLRLYRPGTSIREVTGEVVRIMVSGLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLGLDVHDVGV 363 (438)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHhCCcCCCHHHHHHhccCccccCCCCccccCcCcCcCCC
Confidence 466677888888999999999999999877766543 3444421100 0 001222221 12111 1122
Q ss_pred CCC-CCcccCCCCeEEEeEEEEEC----------CEEeeeEEEEEeC
Q psy9913 94 GIP-DSRPLEDGDIVNVDVTVYLN----------GYHGDCSATFCVG 129 (309)
Q Consensus 94 ~~p-~~~~l~~gd~v~iD~g~~~~----------Gy~~d~~Rt~~vG 129 (309)
+.+ .+++|++|.++.|.-|..+. |+..-+.-|+.|.
T Consensus 364 ~~~~~~~~L~~GmV~tvEPgiY~~~~~~~~~~~~~~GiRiED~VlVT 410 (438)
T PRK10879 364 YGQDRSRILEPGMVLTVEPGLYIAPDADVPEQYRGIGIRIEDDIVIT 410 (438)
T ss_pred cCCCCCCcCCCCCEEEECCEEEECCCcCcccccCccEEEeccEEEEC
Confidence 222 35789999999999998753 4666677788884
No 67
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=93.22 E-value=0.84 Score=44.24 Aligned_cols=101 Identities=11% Similarity=0.145 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCcc--CCCCCCCCCceeEecCCCccccC---CC-----C
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYP--SPLNYKGYPKSICTSVNNVACHG---IP-----D 97 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~--~~~~~~~~~~~v~~g~~~~~~h~---~p-----~ 97 (309)
.++.+.+++..|..++++.++||++-.||...+++.+.+.|..- ..+....+...++-|......|. .| .
T Consensus 264 ~~~~L~eAv~eA~~aaI~~~kpGv~~~dI~~AIqevies~G~e~~Gk~f~~k~I~nltGHgIG~y~iHe~k~iP~v~~~~ 343 (470)
T PTZ00053 264 KYDPLLQATKDATNTGIKEAGIDVRLSDIGAAIQEVIESYEVEIKGKTYPIKSIRNLNGHSIGPYIIHGGKSVPIVKGGE 343 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcccCcccccccccCCcccCCCCccccCCCcCCeeCCCC
Confidence 46677888899999999999999999999999999999998631 00000000111111211111232 22 3
Q ss_pred CcccCCCCeEEEeEEEE-ECCEEeeeEEEEEe
Q psy9913 98 SRPLEDGDIVNVDVTVY-LNGYHGDCSATFCV 128 (309)
Q Consensus 98 ~~~l~~gd~v~iD~g~~-~~Gy~~d~~Rt~~v 128 (309)
..+|++|+++.|+..+. =.||..|-.++-..
T Consensus 344 ~~~LeeGmVfaIEPf~stG~G~v~~~~~~siY 375 (470)
T PTZ00053 344 NTRMEEGELFAIETFASTGRGYVNEDLECSHY 375 (470)
T ss_pred CCEecCCCEEEEcceeeCCCCeEecCCCceee
Confidence 45899999999998765 46777775554443
No 68
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=89.60 E-value=9.9 Score=33.06 Aligned_cols=95 Identities=18% Similarity=0.141 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHHhc-cCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeE--ecCCCcccc-CCC-CCcccCCCC
Q psy9913 31 ESCKLARFVLDCIAEHI-KVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSIC--TSVNNVACH-GIP-DSRPLEDGD 105 (309)
Q Consensus 31 ~A~~i~~~~~~~~~~~i-~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~--~g~~~~~~h-~~p-~~~~l~~gd 105 (309)
++.+++.++..++++.+ +||.+-.++...+++.+.+.|.... ...++. +. ......... +.+ .+.+|++|.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~g~~~~--h~~GHg--IG~~l~~hE~P~i~~~~~~~~~L~~Gm 190 (224)
T cd01085 115 RDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKAGLDYG--HGTGHG--VGSFLNVHEGPQSISPAPNNVPLKAGM 190 (224)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCCCC--CCCCCC--CCCCCcCCCCCCcCCcCCCCCCcCCCC
Confidence 34444555556666655 5999999999999999988876411 011121 11 111111101 122 356899999
Q ss_pred eEEEeEEEEECC-EEeeeEEEEEeC
Q psy9913 106 IVNVDVTVYLNG-YHGDCSATFCVG 129 (309)
Q Consensus 106 ~v~iD~g~~~~G-y~~d~~Rt~~vG 129 (309)
++.+.-+....| ...-+..|+.|.
T Consensus 191 vftiEP~iy~~g~~gvried~v~Vt 215 (224)
T cd01085 191 ILSNEPGYYKEGKYGIRIENLVLVV 215 (224)
T ss_pred EEEECCEeEeCCCeEEEeeEEEEEe
Confidence 999999987643 556677888884
No 69
>PRK13607 proline dipeptidase; Provisional
Probab=85.74 E-value=6.6 Score=38.02 Aligned_cols=42 Identities=10% Similarity=-0.001 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHH----HHHCCCc
Q psy9913 29 MHESCKLARFVLDCIAEHIKVNMTTNELDVFAHEL----IINNGAY 70 (309)
Q Consensus 29 ~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~----~~~~G~~ 70 (309)
.++..+++.++.+++++.++||++-.|+.....+. +.+.|..
T Consensus 270 ~~~ly~~v~~aq~aai~~ikPG~~~~dv~~aa~~~i~~~L~~~Gl~ 315 (443)
T PRK13607 270 FAALIKDVNKEQLALIATMKPGVSYVDLHIQMHQRIAKLLRKFQIV 315 (443)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCC
Confidence 34677889999999999999999999998766544 4555554
No 70
>KOG2775|consensus
Probab=85.39 E-value=11 Score=34.24 Aligned_cols=40 Identities=23% Similarity=0.273 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHh
Q psy9913 133 ASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQ 172 (309)
Q Consensus 133 ~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~ 172 (309)
.+.+++.++-+.+...+.+-+|||++.-||.+.++...++
T Consensus 86 ~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~ 125 (397)
T KOG2775|consen 86 QDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRK 125 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHH
Confidence 3556777777888888899999999999999988776553
No 71
>KOG2776|consensus
Probab=84.54 E-value=5.7 Score=36.84 Aligned_cols=111 Identities=16% Similarity=0.191 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhCCceecccccccCccccccCCCcccccCCCCCCCCCCCcee
Q psy9913 134 SGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSII 213 (309)
Q Consensus 134 ~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 213 (309)
.++.+=+.+..++....+..+||++..||......++.++- +++|... ..++.|--+
T Consensus 23 KYk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t------------~kiYK~e-----------K~~~KGIAf 79 (398)
T KOG2776|consen 23 KYKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEET------------GKIYKKE-----------KDFEKGIAF 79 (398)
T ss_pred hhhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHH------------HHHHhhh-----------hhhhccccc
Confidence 45666777888888899999999999999998888776641 1222100 011111111
Q ss_pred ehhhhccccceeeccccccccccccCCCcccccCCCCCCCccCCcEEEEccccccCCceeEEecCCceEEecCCCceeee
Q psy9913 214 ENVAKHNKLRVVPEILGHGIGSYFHGPPDIFHTKNDYPGKMEPGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQF 293 (309)
Q Consensus 214 ~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (309)
++ ..-...+.+ |-.|.. .+.+..|++|.++-|.-|+...+ |.+-+
T Consensus 80 PT------~Isvnncv~-------h~sPlk----sd~~~~Lk~GDvVKIdLG~HiDG------------------fiA~v 124 (398)
T KOG2776|consen 80 PT------SISVNNCVC-------HFSPLK----SDADYTLKEGDVVKIDLGVHIDG------------------FIALV 124 (398)
T ss_pred cc------eecccceee-------ccCcCC----CCCcccccCCCEEEEEeeeeecc------------------ceeee
Confidence 00 000112222 344543 24578999999999988887532 24568
Q ss_pred eEEEEEcCC
Q psy9913 294 EHTVLVTYD 302 (309)
Q Consensus 294 edtvlVt~~ 302 (309)
.+|++|++.
T Consensus 125 aHT~VV~~~ 133 (398)
T KOG2776|consen 125 AHTIVVGPA 133 (398)
T ss_pred eeeEEeccC
Confidence 999999764
No 72
>KOG1189|consensus
Probab=77.46 E-value=11 Score=38.40 Aligned_cols=102 Identities=18% Similarity=0.188 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCC-CC-CCCCCceeEecCCCccccCCCCCcccCCCC
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSP-LN-YKGYPKSICTSVNNVACHGIPDSRPLEDGD 105 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~-~~-~~~~~~~v~~g~~~~~~h~~p~~~~l~~gd 105 (309)
.|.++...--.+.++++..++||..-.++...+...+.+.+-+-.. +. -.+|...+-+-.++.. -..-++++|++|+
T Consensus 258 emq~nY~fLl~aqe~il~~lrpG~ki~dVY~~~l~~v~k~~Pel~~~~~k~lG~~iGlEFREssl~-inaKnd~~lk~gm 336 (960)
T KOG1189|consen 258 EMQENYEFLLAAQEEILKLLRPGTKIGDVYEKALDYVEKNKPELVPNFTKNLGFGIGLEFRESSLV-INAKNDRVLKKGM 336 (960)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhcCcchhhhhhhhcccccceeeeccccc-ccccchhhhccCc
Confidence 3556777778888899999999999999999999999987654211 00 0122211111111111 1122568999999
Q ss_pred eEEEeEEEE-------ECCEEeeeEEEEEeCC
Q psy9913 106 IVNVDVTVY-------LNGYHGDCSATFCVGE 130 (309)
Q Consensus 106 ~v~iD~g~~-------~~Gy~~d~~Rt~~vG~ 130 (309)
++.|.+|.. .+.|.--++-|+.||+
T Consensus 337 vFni~lGf~nl~n~~~~~~yaL~l~DTvlv~e 368 (960)
T KOG1189|consen 337 VFNISLGFSNLTNPESKNSYALLLSDTVLVGE 368 (960)
T ss_pred EEEEeeccccccCcccccchhhhccceeeecC
Confidence 999999954 2346666778999975
No 73
>cd01666 TGS_DRG_C TGS_DRG_C: DRG (developmentally regulated GTP-binding protein) represents a family of GTP-binding proteins that includes two members, DRG1 and DRG2. DRG1 and DRG2 have a C-terminal TGS domain (named after the ThrRS, GTPase, and SpoT proteins where it occurs) with a predominantly beta-sheet structure. The function of TGS is unknown but its presence in two types of regulatory proteins (the DRG GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=51.67 E-value=61 Score=23.01 Aligned_cols=52 Identities=15% Similarity=0.200 Sum_probs=32.0
Q ss_pred ccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCC-ccccCCCCCcccCCCCeEEE
Q psy9913 47 IKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNN-VACHGIPDSRPLEDGDIVNV 109 (309)
Q Consensus 47 i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~-~~~h~~p~~~~l~~gd~v~i 109 (309)
++.|-|..+++..+...+.+.=.+ . ...|.+. ..+.-.+-+.+|++||+|.|
T Consensus 21 L~~GaTV~D~a~~iH~di~~~f~~---------A--~v~g~s~~~~gq~Vgl~~~L~d~DvVeI 73 (75)
T cd01666 21 LRRGSTVEDVCNKIHKDLVKQFKY---------A--LVWGSSVKHSPQRVGLDHVLEDEDVVQI 73 (75)
T ss_pred ECCCCCHHHHHHHHHHHHHHhCCe---------e--EEeccCCcCCCeECCCCCEecCCCEEEE
Confidence 457899999999888776543111 1 1111111 12233467889999999976
No 74
>PF00254 FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomerase; InterPro: IPR001179 Synonym(s): Peptidylprolyl cis-trans isomerase FKBP-type peptidylprolyl isomerases (5.2.1.8 from EC) in vertebrates, are receptors for the two immunosuppressants, FK506 and rapamycin. The drugs inhibit T cell proliferation by arresting two distinct cytoplasmic signal transmission pathways. Peptidylprolyl isomerases accelerate protein folding by catalysing the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides. These proteins are found in a variety of organisms.; GO: 0006457 protein folding; PDB: 1IX5_A 3JXV_A 3JYM_A 1T11_A 1PBK_A 1FD9_A 2VCD_A 3B7X_A 1Q6H_B 1Q6I_B ....
Probab=42.02 E-value=79 Score=22.76 Aligned_cols=53 Identities=30% Similarity=0.323 Sum_probs=37.8
Q ss_pred CcccCCCCeEEEeEEEEE-CCEEeeeE------EEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCch
Q psy9913 98 SRPLEDGDIVNVDVTVYL-NGYHGDCS------ATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYF 159 (309)
Q Consensus 98 ~~~l~~gd~v~iD~g~~~-~Gy~~d~~------Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~ 159 (309)
++..+.||.|.+++-+.. +|-.-|-+ .+|.+|... +..+.+.++..+++|.+.
T Consensus 2 ~~~~~~gd~V~i~y~~~~~~g~~~~~~~~~~~~~~~~~g~~~---------~i~g~e~al~~m~~Ge~~ 61 (94)
T PF00254_consen 2 PRTPKEGDTVTIHYTGRLEDGKVFDSSYQEGEPFEFRLGSGQ---------VIPGLEEALIGMKVGEKR 61 (94)
T ss_dssp SSSBSTTSEEEEEEEEEETTSEEEEETTTTTSEEEEETTSSS---------SSHHHHHHHTTSBTTEEE
T ss_pred CccCCCCCEEEEEEEEEECCCcEEEEeeecCcceeeeeccCc---------cccchhhhcccccCCCEe
Confidence 456889999999999887 77666666 567776421 334666777788888663
No 75
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=33.91 E-value=1.6e+02 Score=29.90 Aligned_cols=73 Identities=15% Similarity=0.208 Sum_probs=46.5
Q ss_pred HHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeE--ecCCCc---cccCCCCCcccCCCCeEEEe
Q psy9913 36 ARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSIC--TSVNNV---ACHGIPDSRPLEDGDIVNVD 110 (309)
Q Consensus 36 ~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~--~g~~~~---~~h~~p~~~~l~~gd~v~iD 110 (309)
.....+.++..++||.+-.+|...+..++...|.+-.+ .|--.++ +|.... .+...-++|+|+.|+++.|.
T Consensus 307 l~~lQk~i~~~~rpG~~~g~iY~~~~~yi~~~~pel~p----nF~~nvG~~igiefR~s~~~~nvkn~r~lq~g~~fnis 382 (1001)
T COG5406 307 LYMLQKYILGLVRPGTDSGIIYSEAEKYISSNGPELGP----NFIYNVGLMIGIEFRSSQKPFNVKNGRVLQAGCIFNIS 382 (1001)
T ss_pred HHHHHHHHHhhcCCCCCchhHHHHHHHHHHhcCCccCc----hHhhhhhhhccccccccccceeccCCceeccccEEEEe
Confidence 33445566778999999999999999999988765211 1211122 221111 11222356889999998888
Q ss_pred EE
Q psy9913 111 VT 112 (309)
Q Consensus 111 ~g 112 (309)
+|
T Consensus 383 ~g 384 (1001)
T COG5406 383 LG 384 (1001)
T ss_pred ec
Confidence 86
No 76
>PF12631 GTPase_Cys_C: Catalytic cysteine-containing C-terminus of GTPase, MnmE; PDB: 1XZQ_A 1XZP_A 2GJ8_D 3GEH_A 3GEI_B 3GEE_A.
Probab=31.48 E-value=1.8e+02 Score=20.21 Aligned_cols=42 Identities=14% Similarity=0.227 Sum_probs=32.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHh
Q psy9913 131 VDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQ 172 (309)
Q Consensus 131 ~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~ 172 (309)
.+.+|+.+++.+.+..+.+++.++.|.+..=+...++.....
T Consensus 10 ~~~Rq~~~L~~a~~~l~~a~~~l~~~~~~dl~a~~L~~A~~~ 51 (73)
T PF12631_consen 10 TNARQRQLLEQALEHLEDALEALENGLPLDLVAEDLREALES 51 (73)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHHHTT--HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 368999999999999999999999997766666666655554
No 77
>KOG2414|consensus
Probab=30.17 E-value=3.2e+02 Score=26.29 Aligned_cols=105 Identities=16% Similarity=0.205 Sum_probs=62.3
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHhccC--CCCHHHHH----HHHHHHHHHCCCccCCCC-----CCCCCceeEecCC
Q psy9913 20 VKTESQIRLMHESCKLARFVLDCIAEHIKV--NMTTNELD----VFAHELIINNGAYPSPLN-----YKGYPKSICTSVN 88 (309)
Q Consensus 20 iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~p--G~te~el~----~~~~~~~~~~G~~~~~~~-----~~~~~~~v~~g~~ 88 (309)
.-|+.+.+.+...-.+-.. .+..+.| |.|..+|- ..+.+.+.+.|+...... ..-+|..| |..
T Consensus 334 kFs~~Qr~LYeavL~vq~e----cik~c~~~~g~sL~~l~~~s~~Ll~~~Lk~lGI~kt~~ee~~~~~klcPHhV--gHy 407 (488)
T KOG2414|consen 334 KFSDAQRDLYEAVLQVQEE----CIKYCKPSNGTSLSQLFERSNELLGQELKELGIRKTDREEMIQAEKLCPHHV--GHY 407 (488)
T ss_pred ccCcHHHHHHHHHHHHHHH----HHHhhcCCCCccHHHHHHHHHHHHHHHHHHhCcccchHHHHHhhhhcCCccc--chh
Confidence 3577777777655555444 4455666 88888874 456677788887654321 12244332 211
Q ss_pred C-ccccCCC---CCcccCCCCeEEEeEEEEE----------CCEEeeeEEEEEeCC
Q psy9913 89 N-VACHGIP---DSRPLEDGDIVNVDVTVYL----------NGYHGDCSATFCVGE 130 (309)
Q Consensus 89 ~-~~~h~~p---~~~~l~~gd~v~iD~g~~~----------~Gy~~d~~Rt~~vG~ 130 (309)
- .-.|-.| .+..|++|.+++|.-|..+ .|-..-+---+.+|+
T Consensus 408 LGmDVHD~p~v~r~~pL~pg~ViTIEPGvYIP~d~d~P~~FrGIGiRIEDDV~i~e 463 (488)
T KOG2414|consen 408 LGMDVHDCPTVSRDIPLQPGMVITIEPGVYIPEDDDPPEEFRGIGIRIEDDVAIGE 463 (488)
T ss_pred cCcccccCCCCCCCccCCCCceEEecCceecCccCCCchHhcCceEEeecceEecc
Confidence 1 1234444 4678999999999888653 444444445566654
No 78
>PF00249 Myb_DNA-binding: Myb-like DNA-binding domain; InterPro: IPR014778 The retroviral oncogene v-myb, and its cellular counterpart c-myb, encode nuclear DNA-binding proteins. These belong to the SANT domain family that specifically recognise the sequence YAAC(G/T)G [, ]. In myb, one of the most conserved regions consisting of three tandem repeats has been shown to be involved in DNA-binding [].; PDB: 1X41_A 2XAF_B 2XAG_B 2XAH_B 2UXN_B 2Y48_B 2XAQ_B 2X0L_B 2IW5_B 2XAJ_B ....
Probab=29.37 E-value=1.2e+02 Score=18.88 Aligned_cols=44 Identities=16% Similarity=-0.030 Sum_probs=33.8
Q ss_pred ccCCHHHHHHHHHHHHHHHHH-HHHHHHhccCCCCHHHHHHHHHH
Q psy9913 19 EVKTESQIRLMHESCKLARFV-LDCIAEHIKVNMTTNELDVFAHE 62 (309)
Q Consensus 19 ~iKs~~Ei~~~r~A~~i~~~~-~~~~~~~i~pG~te~el~~~~~~ 62 (309)
.--|++|-+.+.+|.+.-..- ...+...+.+|.|..++......
T Consensus 2 ~~Wt~eE~~~l~~~v~~~g~~~W~~Ia~~~~~~Rt~~qc~~~~~~ 46 (48)
T PF00249_consen 2 GPWTEEEDEKLLEAVKKYGKDNWKKIAKRMPGGRTAKQCRSRYQN 46 (48)
T ss_dssp -SS-HHHHHHHHHHHHHSTTTHHHHHHHHHSSSSTHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCcHHHHHHHHcCCCCCHHHHHHHHHh
Confidence 345889999999998888777 88888877679999988776654
No 79
>PF07305 DUF1454: Protein of unknown function (DUF1454); InterPro: IPR009918 This family consists of several Enterobacterial sequences of around 200 residues in length, which are often known as YiiQ proteins. The function of this family is unknown.
Probab=28.24 E-value=3.3e+02 Score=23.10 Aligned_cols=42 Identities=10% Similarity=0.046 Sum_probs=33.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhC
Q psy9913 132 DASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQN 173 (309)
Q Consensus 132 ~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~ 173 (309)
.++++..-..+.+=..++++..-|..+...-.+.+++.+.+.
T Consensus 114 ~~e~kaar~~a~~YmaAl~r~F~Ptls~eQs~~kl~~lL~~g 155 (200)
T PF07305_consen 114 GPEQKAARALAIEYMAALMRQFEPTLSPEQSQEKLQKLLTKG 155 (200)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHcC
Confidence 367777777777777788888899999999988888887663
No 80
>PF07308 DUF1456: Protein of unknown function (DUF1456); InterPro: IPR009921 This domain occurs in several hypothetical bacterial proteins of around 150 residues in length. The function of this domain is unknown.
Probab=27.21 E-value=95 Score=21.61 Aligned_cols=39 Identities=13% Similarity=0.095 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHH
Q psy9913 24 SQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHE 62 (309)
Q Consensus 24 ~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~ 62 (309)
.-+..+|.|-.+.+.-+..+++...--+|..||.+++..
T Consensus 3 dILrkLRyal~l~d~~m~~if~l~~~~vs~~el~a~lrk 41 (68)
T PF07308_consen 3 DILRKLRYALDLKDDDMIEIFALAGFEVSKAELSAWLRK 41 (68)
T ss_pred HHHHHHHHHHcCChHHHHHHHHHcCCccCHHHHHHHHCC
Confidence 457899999999999999999999888999999888766
No 81
>PF05184 SapB_1: Saposin-like type B, region 1; InterPro: IPR007856 Synonym(s):cerebroside sulphate activator, CSAct Saposin B is a small non-enzymatic glycoprotein required for the breakdown of cerebroside sulphates (sulphatides) in lysosomes. Saposin B contains three intramolecular disulphide bridges, exists as a dimer and is remarkably heat, protease, and pH stable. The crystal structure of human saposin B reveals an unusual shell-like dimer consisting of a monolayer of alpha-helices enclosing a large hydrophobic cavity. Although the secondary structure of saposin B is similar to that of the known monomeric members of the saposin-like superfamily, the helices are repacked into a different tertiary arrangement to form the homodimer. A comparison of the two forms of the saposin B dimer suggests that extraction of target lipids from membranes involves a conformational change that facilitates access to the inner cavity [].; GO: 0006629 lipid metabolic process; PDB: 1N69_C 1QDM_C 4DDJ_A 2DOB_A 1OF9_A 2Z9A_A 1M12_A 2GTG_A 1SN6_A 2QYP_B ....
Probab=26.78 E-value=1.3e+02 Score=17.68 Aligned_cols=33 Identities=24% Similarity=0.392 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHH
Q psy9913 33 CKLARFVLDCIAEHIKVNMTTNELDVFAHELII 65 (309)
Q Consensus 33 ~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~ 65 (309)
+.+...++..+...+....|+.+|...+.+...
T Consensus 4 C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~ 36 (39)
T PF05184_consen 4 CDICKFVVKEIEKLLKNNKTEEEIKKALEKACN 36 (39)
T ss_dssp HHHHHHHHHHHHHHHHSTCHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHHcCccHHHHHHHHHHHHh
Confidence 566777888888888899999999999988764
No 82
>PF11020 DUF2610: Domain of unknown function (DUF2610); InterPro: IPR021277 This family is conserved in Proteobacteria. One member is annotated as being elongation factor P but this could not be confirmed.
Probab=26.37 E-value=1.4e+02 Score=21.49 Aligned_cols=53 Identities=11% Similarity=0.116 Sum_probs=33.6
Q ss_pred eEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHH
Q psy9913 110 DVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENV 169 (309)
Q Consensus 110 D~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~ 169 (309)
.+-|.++|=.+-++ +++|+|.+..-- ..-+..+++.-|-|.--.+|.+...++
T Consensus 5 ~i~C~Fggq~a~F~--iYIG~P~~~~HP-----l~~Q~~WLskeRgG~IP~~V~~sl~kL 57 (82)
T PF11020_consen 5 VIPCDFGGQRAPFA--IYIGEPKPDHHP-----LQFQATWLSKERGGQIPEKVMDSLSKL 57 (82)
T ss_pred EeCCccCCccCcee--EEeCCCCCCCCc-----hHHHHHHHHHhhCCCCCHHHHHHHHHH
Confidence 45566777666654 889987655433 234556677777777767776655543
No 83
>PF04355 SmpA_OmlA: SmpA / OmlA family; InterPro: IPR007450 This is a bacterial outer membrane lipoprotein, possibly involved in maintaining the structural integrity of the cell envelope []. The lipid attachment site is a conserved N-terminal cysteine residue sometimes found adjacent to the OmpA domain (IPR006665 from INTERPRO).; GO: 0019867 outer membrane; PDB: 4DM5_C 2PXG_A 2YH9_B 2KXX_A 2KM7_A.
Probab=22.23 E-value=63 Score=22.23 Aligned_cols=19 Identities=21% Similarity=0.249 Sum_probs=14.3
Q ss_pred HHHHhccCCCCHHHHHHHH
Q psy9913 42 CIAEHIKVNMTTNELDVFA 60 (309)
Q Consensus 42 ~~~~~i~pG~te~el~~~~ 60 (309)
..++.|++|||..|+...+
T Consensus 7 ~~~~~i~~GmTk~qV~~lL 25 (71)
T PF04355_consen 7 EQLAQIKPGMTKDQVRALL 25 (71)
T ss_dssp HHHTTT-TTSBHHHHHHHH
T ss_pred HHHHhhcCCCCHHHHHHhc
Confidence 4567789999999988665
No 84
>COG0414 PanC Panthothenate synthetase [Coenzyme metabolism]
Probab=22.08 E-value=2.3e+02 Score=25.63 Aligned_cols=53 Identities=19% Similarity=0.120 Sum_probs=42.3
Q ss_pred eeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCch-hHHHHHHHHHHHhCCc
Q psy9913 120 GDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYF-STIGSIIENVAKQNKL 175 (309)
Q Consensus 120 ~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~-~dv~~~~~~~~~~~g~ 175 (309)
+--+|..++ ++++++..-.+..+..++.+.+..|... .++-+++.+.+++.+.
T Consensus 185 A~SSRN~YL---s~eeR~~A~~L~~~L~~~~~~~~~G~~~~~~i~~~~~~~L~~~~~ 238 (285)
T COG0414 185 ALSSRNVYL---SAEERKAAPALYRALTAAAELAAGGERDPAKIIEAARQVLEEAGF 238 (285)
T ss_pred chhhccccC---CHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHhcCC
Confidence 344677666 7788888888888888999999999876 8888999999886544
No 85
>PF14615 Rsa3: Ribosome-assembly protein 3
Probab=20.98 E-value=30 Score=22.25 Aligned_cols=29 Identities=3% Similarity=0.123 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCC
Q psy9913 24 SQIRLMHESCKLARFVLDCIAEHIKVNMT 52 (309)
Q Consensus 24 ~Ei~~~r~A~~i~~~~~~~~~~~i~pG~t 52 (309)
++|+.+|+|-......+..+++.++.|..
T Consensus 16 dDLd~lR~~~dF~~~sl~~Li~aL~~G~~ 44 (47)
T PF14615_consen 16 DDLDELRKAPDFTDKSLPLLIDALQQGTD 44 (47)
T ss_pred HHHHHHhcCCCCCchhHHHHHHHHHhccc
Confidence 57889999888888888888888877753
No 86
>cd04938 TGS_Obg-like TGS_Obg-like: The C-terminal TGS domain of Obg-like GTPases such as those present in DRG (developmentally regulated GTP-binding protein), and GTP-binding proteins Ygr210 and YchF. The TGS domain (named after the ThrRS, GTPase, and SpoT proteins where it occurs) is a small domain of about 50 amino acid residues with a predominantly beta-sheet structure. There is no direct information on the function of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=20.68 E-value=2.1e+02 Score=20.21 Aligned_cols=47 Identities=13% Similarity=0.009 Sum_probs=30.2
Q ss_pred ccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCccccCCCCCcccCCCCeEEE
Q psy9913 47 IKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVACHGIPDSRPLEDGDIVNV 109 (309)
Q Consensus 47 i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~h~~p~~~~l~~gd~v~i 109 (309)
++.|.|..+++..+...+.+.=.+. ...+ +.....+..|++||++.|
T Consensus 28 l~~g~tv~d~a~~IH~d~~~~F~~A-----------~v~~-----~~~vg~d~~l~d~DVv~i 74 (76)
T cd04938 28 VKKGTTVGDVARKIHGDLEKGFIEA-----------VGGR-----RRLEGKDVILGKNDILKF 74 (76)
T ss_pred EcCCCCHHHHHHHHhHHHHhccEEE-----------EEcc-----CEEECCCEEecCCCEEEE
Confidence 4568999999998887666431111 1122 222345778999999986
No 87
>PF10415 FumaraseC_C: Fumarase C C-terminus; InterPro: IPR018951 Fumarase C catalyses the stereo-specific interconversion of fumarate to L-malate as part of the Krebs cycle. The full-length protein forms a tetramer with visible globular shape. FumaraseC_C is the C-terminal 65 residues referred to as domain 3. The core of the molecule consists of a bundle of 20 alpha-helices from the five-helix bundle of domain 2. The projections from the core of the tetramer are generated from domains 1 and 3 of each subunit []. This entry does not appear to be part of either the active site or the activation site but is helical in structure forming a little bundle. ; GO: 0016829 lyase activity, 0006099 tricarboxylic acid cycle; PDB: 3RRP_A 3OCE_D 3OCF_D 3E04_B 3GTD_A 3R6V_F 3R6Q_F 1J3U_B 1FUR_A 1YFE_A ....
Probab=20.33 E-value=1.4e+02 Score=19.73 Aligned_cols=35 Identities=20% Similarity=0.272 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHHH---HHHh-ccCC-CCHHHHHHHHHH
Q psy9913 28 LMHESCKLARFVLDC---IAEH-IKVN-MTTNELDVFAHE 62 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~---~~~~-i~pG-~te~el~~~~~~ 62 (309)
.|.+|++|+.++++. +.+. +..| +|+.|++..+.-
T Consensus 10 GYe~aa~iAk~A~~~g~svre~v~~~g~lt~ee~d~ll~p 49 (55)
T PF10415_consen 10 GYEKAAEIAKEALAEGRSVREVVLEEGLLTEEELDELLDP 49 (55)
T ss_dssp HHHHHHHHHHHHHHHT--HHHHHHHTTSS-HHHHHHHTSH
T ss_pred ccHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHHHHcCH
Confidence 578899999888864 3332 2355 788888776543
No 88
>PF09506 Salt_tol_Pase: Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase); InterPro: IPR012765 Proteins in this family are glucosylglycerol-phosphate phosphatases, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=20.13 E-value=4.1e+02 Score=24.85 Aligned_cols=50 Identities=8% Similarity=0.227 Sum_probs=44.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCcc
Q psy9913 22 TESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYP 71 (309)
Q Consensus 22 s~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~ 71 (309)
|+.||+.+-++-..-...+...+..+-|..+..++...+...+.+.-+-|
T Consensus 98 s~~El~FLa~vP~~m~~~L~~~l~~~~p~l~~~~i~~~~~~sVldt~~SP 147 (381)
T PF09506_consen 98 SDAELAFLAAVPERMEALLKEFLPAILPELSQEEIEKLIEASVLDTRVSP 147 (381)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhCcccCHHHHHHHHHHHHhcCCCCC
Confidence 78899999999999999999999999999999999999999887765543
Done!