Query psy9913
Match_columns 309
No_of_seqs 175 out of 1354
Neff 8.5
Searched_HMMs 29240
Date Fri Aug 16 22:51:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9913.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9913hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tb5_A Methionine aminopeptida 100.0 1.3E-58 4.4E-63 414.2 29.5 246 17-309 1-247 (264)
2 3mx6_A Methionine aminopeptida 100.0 3.1E-58 1E-62 411.2 29.1 247 16-309 4-252 (262)
3 3tav_A Methionine aminopeptida 100.0 1.2E-57 4.1E-62 412.2 30.0 255 8-309 20-284 (286)
4 3pka_A Methionine aminopeptida 100.0 1.1E-56 3.8E-61 405.5 32.5 247 16-309 37-284 (285)
5 4fuk_A Methionine aminopeptida 100.0 4.2E-57 1.5E-61 417.1 28.5 251 12-309 55-306 (337)
6 1o0x_A Methionine aminopeptida 100.0 8.6E-57 3E-61 401.8 28.9 248 15-309 11-260 (262)
7 2gg2_A Methionine aminopeptida 100.0 2.4E-56 8.1E-61 399.3 29.0 246 17-309 1-249 (263)
8 3s6b_A Methionine aminopeptida 100.0 3.2E-56 1.1E-60 411.9 30.0 248 15-309 98-349 (368)
9 2b3h_A Methionine aminopeptida 100.0 6.5E-56 2.2E-60 406.7 30.0 247 16-309 71-318 (329)
10 1qxy_A Methionyl aminopeptidas 100.0 3.2E-55 1.1E-59 389.6 24.0 242 20-309 3-247 (252)
11 3q6d_A Proline dipeptidase; st 100.0 4.2E-52 1.4E-56 387.1 23.0 233 5-309 116-348 (356)
12 2zsg_A Aminopeptidase P, putat 100.0 3.7E-52 1.3E-56 387.8 21.1 233 5-309 119-351 (359)
13 4ege_A Dipeptidase PEPE; struc 100.0 9.5E-52 3.2E-56 387.2 21.4 233 4-309 135-368 (378)
14 1wy2_A XAA-Pro dipeptidase; st 100.0 1.2E-51 4.1E-56 383.2 21.8 232 5-309 113-345 (351)
15 1wn1_A Dipeptidase; prolidase, 100.0 9.4E-52 3.2E-56 384.6 19.8 227 11-309 122-348 (356)
16 4fkc_A XAA-Pro aminopeptidase; 100.0 2.8E-51 9.5E-56 384.4 20.1 228 11-309 141-369 (377)
17 2q8k_A Proliferation-associate 100.0 7.6E-50 2.6E-54 375.6 27.7 249 13-309 12-342 (401)
18 3ig4_A XAA-Pro aminopeptidase; 100.0 1.2E-50 4.1E-55 384.1 19.6 233 11-309 162-399 (427)
19 2v3z_A XAA-Pro aminopeptidase; 100.0 6.2E-50 2.1E-54 382.0 22.2 251 6-308 162-420 (440)
20 3rva_A Organophosphorus acid a 100.0 2.1E-50 7.2E-55 384.7 16.6 259 12-308 151-437 (451)
21 1xgs_A Methionine aminopeptida 100.0 4.1E-48 1.4E-52 350.6 25.0 228 24-309 1-295 (295)
22 3l24_A XAA-Pro dipeptidase; PI 100.0 3.3E-48 1.1E-52 373.1 21.3 258 12-308 151-434 (517)
23 1kp0_A Creatine amidinohydrola 100.0 3.3E-48 1.1E-52 366.4 18.6 245 5-309 143-390 (402)
24 1chm_A Creatine amidinohydrola 100.0 3.4E-47 1.2E-51 359.3 19.9 244 5-309 143-390 (401)
25 2iw2_A XAA-Pro dipeptidase; me 100.0 8.7E-47 3E-51 364.7 22.6 254 13-309 180-468 (494)
26 3biq_A FACT complex subunit SP 100.0 2.6E-47 8.9E-52 366.9 17.5 243 5-308 163-435 (467)
27 4b28_A Metallopeptidase, famil 100.0 7.2E-48 2.5E-52 368.9 12.4 234 4-309 214-459 (470)
28 3cb6_A FACT complex subunit SP 100.0 6.4E-47 2.2E-51 362.0 17.6 248 5-309 163-429 (444)
29 1b6a_A Methionine aminopeptida 100.0 8.2E-46 2.8E-50 351.9 23.2 248 14-309 152-474 (478)
30 3fm3_A Methionine aminopeptida 100.0 5.3E-45 1.8E-49 338.1 26.1 253 13-309 32-354 (358)
31 2nw5_A Methionine aminopeptida 100.0 2.8E-44 9.6E-49 332.4 24.6 246 20-309 41-356 (360)
32 3ctz_A XAA-Pro aminopeptidase 100.0 9.5E-44 3.3E-48 351.7 17.1 233 6-309 308-564 (623)
33 4b6a_t Probable metalloproteas 99.9 2E-24 6.9E-29 206.8 21.9 254 12-271 32-349 (614)
34 3fm3_A Methionine aminopeptida 96.6 0.0083 2.8E-07 55.0 9.7 43 133-175 46-88 (358)
35 4ege_A Dipeptidase PEPE; struc 96.5 0.018 6E-07 53.1 10.8 98 28-129 259-359 (378)
36 3q6d_A Proline dipeptidase; st 96.4 0.025 8.7E-07 51.4 11.4 98 28-129 239-339 (356)
37 1wn1_A Dipeptidase; prolidase, 96.2 0.029 9.9E-07 51.2 10.8 98 28-129 239-339 (356)
38 1o0x_A Methionine aminopeptida 96.1 0.028 9.5E-07 49.0 9.7 83 28-115 131-219 (262)
39 1wy2_A XAA-Pro dipeptidase; st 96.1 0.041 1.4E-06 50.1 11.2 97 28-128 236-335 (351)
40 3pka_A Methionine aminopeptida 96.0 0.03 1E-06 49.5 9.4 99 28-129 155-275 (285)
41 2zsg_A Aminopeptidase P, putat 96.0 0.043 1.5E-06 49.9 10.6 98 28-129 242-342 (359)
42 3mx6_A Methionine aminopeptida 96.0 0.076 2.6E-06 46.1 11.8 83 28-115 122-210 (262)
43 3tb5_A Methionine aminopeptida 95.8 0.038 1.3E-06 48.1 9.1 83 29-116 119-207 (264)
44 2gg2_A Methionine aminopeptida 95.8 0.07 2.4E-06 46.3 10.7 83 28-115 120-208 (263)
45 4fkc_A XAA-Pro aminopeptidase; 95.7 0.066 2.3E-06 49.0 10.8 95 28-128 260-359 (377)
46 1qxy_A Methionyl aminopeptidas 95.7 0.055 1.9E-06 46.6 9.7 97 28-129 118-239 (252)
47 4fuk_A Methionine aminopeptida 95.4 0.12 4.1E-06 46.8 11.1 45 133-177 70-114 (337)
48 3tav_A Methionine aminopeptida 95.4 0.058 2E-06 47.6 8.6 97 28-129 149-275 (286)
49 3cb6_A FACT complex subunit SP 95.3 0.14 4.8E-06 47.9 11.4 96 28-129 307-420 (444)
50 3s6b_A Methionine aminopeptida 95.1 0.074 2.5E-06 48.7 8.7 83 28-115 220-308 (368)
51 2b3h_A Methionine aminopeptida 95.0 0.19 6.6E-06 45.2 11.1 97 28-129 189-309 (329)
52 1kp0_A Creatine amidinohydrola 95.0 0.15 5E-06 47.1 10.6 98 28-128 272-380 (402)
53 3biq_A FACT complex subunit SP 94.7 0.25 8.4E-06 46.6 11.5 97 28-129 314-425 (467)
54 1xgs_A Methionine aminopeptida 94.6 0.1 3.5E-06 46.3 8.0 81 29-114 104-191 (295)
55 2v3z_A XAA-Pro aminopeptidase; 94.6 0.4 1.4E-05 44.9 12.5 101 28-129 285-412 (440)
56 3ig4_A XAA-Pro aminopeptidase; 94.5 0.26 9E-06 46.0 10.9 100 29-129 282-390 (427)
57 2nw5_A Methionine aminopeptida 94.3 0.21 7.1E-06 45.6 9.6 42 134-175 49-90 (360)
58 1chm_A Creatine amidinohydrola 94.2 0.31 1.1E-05 45.0 10.7 98 28-128 272-380 (401)
59 2q8k_A Proliferation-associate 93.5 0.51 1.7E-05 43.7 10.8 83 28-115 145-239 (401)
60 1b6a_A Methionine aminopeptida 91.9 0.61 2.1E-05 44.1 9.0 89 28-116 272-370 (478)
61 3rva_A Organophosphorus acid a 91.1 1.5 5.2E-05 41.1 10.8 36 29-64 271-306 (451)
62 4b28_A Metallopeptidase, famil 90.3 0.66 2.3E-05 43.8 7.6 96 28-129 345-450 (470)
63 3ctz_A XAA-Pro aminopeptidase 89.6 0.9 3.1E-05 44.5 8.2 94 28-128 439-542 (623)
64 3l24_A XAA-Pro dipeptidase; PI 87.7 2.6 8.8E-05 40.3 9.7 36 29-64 268-303 (517)
65 2iw2_A XAA-Pro dipeptidase; me 85.7 3.5 0.00012 39.1 9.5 42 134-175 195-237 (494)
66 4b6a_t Probable metalloproteas 84.6 3.9 0.00013 39.6 9.1 41 133-173 47-96 (614)
67 2ki0_A DS119; beta-alpha-beta, 26.5 22 0.00074 19.7 0.8 24 122-145 4-27 (36)
68 3noj_A 4-carboxy-4-hydroxy-2-o 23.2 86 0.0029 26.4 4.4 65 100-178 163-230 (238)
No 1
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=100.00 E-value=1.3e-58 Score=414.16 Aligned_cols=246 Identities=32% Similarity=0.555 Sum_probs=233.1
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCccccCCC
Q psy9913 17 VPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVACHGIP 96 (309)
Q Consensus 17 ~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~h~~p 96 (309)
||.|||++||++||+|+++++++++++++.++||+||.||++.++..++++|+.+.+..+.+|++++++|.|+..+|+.|
T Consensus 1 M~~IKs~~EI~~mr~A~~i~~~a~~~~~~~ikpG~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~H~~~ 80 (264)
T 3tb5_A 1 MITLKSPREIEMMDESGELLADVHRHLRTFIKPGITSWDIEVFVRDFIESHGGVAAQIGYEGYKYATCCSINDEICHGFP 80 (264)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCCSEEEEETTEEECCCC
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHHHHcCCCcccccccCCCcceEECCcccccCCCC
Confidence 79999999999999999999999999999999999999999999999999999887776778999999999999999999
Q ss_pred CCcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhCCce
Q psy9913 97 DSRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQNKLR 176 (309)
Q Consensus 97 ~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~g~~ 176 (309)
++++|++||+|++|+|+.|+||++|++|||++|+++++++++|++++++++++++++|||++++||++++++++++.|+.
T Consensus 81 ~~~~l~~Gdlv~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~l~~~v~~a~~~~i~~~kpG~~~~di~~a~~~~~~~~g~~ 160 (264)
T 3tb5_A 81 RKKVLKDGDLIKVDMCVDLKGAISDSCWSYVVGESTPEIDRLMEVTKKALYLGIEQAQVGNRIGDIGHAIQTYVEGEGYG 160 (264)
T ss_dssp CSCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHHHTTCE
T ss_pred CCccccCCCEEEEeccceecceeeecccccccCCccHHHHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999886
Q ss_pred ecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCcccccC-CCCCCCcc
Q psy9913 177 VVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIFHTK-NDYPGKME 255 (309)
Q Consensus 177 ~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~~~~-~~~~~~l~ 255 (309)
..+ +++|||+|+.+|+.|.+..+. ++.+.+|+
T Consensus 161 ~~~-----------------------------------------------~~~GHgiG~~~~e~p~i~~~~~~~~~~~L~ 193 (264)
T 3tb5_A 161 VVR-----------------------------------------------DFVGHGIGPTIHESPMIPHYGEAGKGLRLK 193 (264)
T ss_dssp ECC-----------------------------------------------SCCEEECSSSSSEEEEECSSCCTTCSCBCC
T ss_pred eee-----------------------------------------------eceecCCCCCCccCCccCccccCCCCCCcc
Confidence 443 889999999999999887643 35568999
Q ss_pred CCcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 256 PGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 256 ~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
+||||++||++|.+..++..++|+|+..++++++|+|+||||+||++|+|+||.
T Consensus 194 ~Gmv~tiEPgiy~~~~~~~~~~d~wt~~~~~g~~gvriEd~vlVT~~G~e~LT~ 247 (264)
T 3tb5_A 194 EGMVITIEPMVNTGTWRMKMDPNGWTAYTEDGGLSCQYEHSLAITKEGPRILTS 247 (264)
T ss_dssp TTCEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECCEEEECCTTCCEETTC
T ss_pred CCcEEEEeeeEEcCCCceEEcCCCCeEEecCCccEEEeceEEEEcCCcCEECCC
Confidence 999999999999999999999999999999999999999999999999999994
No 2
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=100.00 E-value=3.1e-58 Score=411.25 Aligned_cols=247 Identities=45% Similarity=0.771 Sum_probs=231.6
Q ss_pred CccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCccccCC
Q psy9913 16 EVPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVACHGI 95 (309)
Q Consensus 16 ~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~h~~ 95 (309)
.++++||++||+.||+|++++.++++++++.++||+||.||++.+++.+.++|+++.+.++.+|++++++|.|+..+|+.
T Consensus 4 ~~~~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~tE~el~~~~~~~~~~~G~~~~~~~~~~f~~iv~~g~n~~~~H~~ 83 (262)
T 3mx6_A 4 SMIKIHTEKDFIKMRAAGKLAAETLDFITDHVKPNVTTNSLNDLCHNFITSHNAIPAPLNYKGFPKSICTSINHVVCHGI 83 (262)
T ss_dssp --CCCCCHHHHHHHHHHHHHHHHHHHHHGGGCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEETTEEECCC
T ss_pred CcceeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEecccccccCCC
Confidence 57899999999999999999999999999999999999999999999999999988766666799999999999999999
Q ss_pred CCCcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhCCc
Q psy9913 96 PDSRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQNKL 175 (309)
Q Consensus 96 p~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~g~ 175 (309)
|++++|++||+|++|+|++|+||++|++|||++|+++++++++|++++++++++++.+|||++++||+++++++++++|+
T Consensus 84 p~~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~ 163 (262)
T 3mx6_A 84 PNDKPLKNGDIVNIDVTVILDGWYGDTSRMYYVGDVAIKPKRLIQVTYDAMMKGIEVVRPGAKLGDIGYAIQSYAEKHNY 163 (262)
T ss_dssp CCSCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCSTTCBHHHHHHHHHHHHHHTTC
T ss_pred CCCcccCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred eecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCccccc-CCCCCCCc
Q psy9913 176 RVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIFHT-KNDYPGKM 254 (309)
Q Consensus 176 ~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~~~-~~~~~~~l 254 (309)
...+ |++|||+|+++||.|.+.++ .++.+.+|
T Consensus 164 ~~~~-----------------------------------------------~~~GHgiG~~~hE~p~i~~~~~~~~~~~L 196 (262)
T 3mx6_A 164 SVVR-----------------------------------------------DYTGHGIGRVFHDKPSILNYGRNGTGLTL 196 (262)
T ss_dssp EECC-----------------------------------------------SCCEEECSSSSSEEEEECSSCCTTCSCBC
T ss_pred ccCC-----------------------------------------------CccccccCCcccCCCcccccCCCCCCCEe
Confidence 6432 88999999999999988665 24567899
Q ss_pred cCCcEEEEccccccCCceeEE-ecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 255 EPGMTFTIEPVLTNGNGQVTM-LEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 255 ~~gmv~~iep~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
++||||++||++|.+.+++++ ++|+|+..++++++++|+||||+||++|+|+||.
T Consensus 197 ~~Gmv~tiEPgiy~g~~gvri~~~d~w~~~~~~~~~~~~~Ed~v~Vt~~G~e~LT~ 252 (262)
T 3mx6_A 197 KEGMFFTVEPMINAGNYDTILSKLDGWTVTTRDKSLSAQFEHTIGVTKDGFEIFTL 252 (262)
T ss_dssp CTTCEEEECCEEESSCSCEEECTTTSCCEEETTCCCEEECBEEEEECSSSEEESCC
T ss_pred CCCCEEEEeCEEEcCCCeEEEecCCCceEEecCCCceeeeceEEEECCCcCeECCC
Confidence 999999999999998888998 8999999999999999999999999999999994
No 3
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus}
Probab=100.00 E-value=1.2e-57 Score=412.16 Aligned_cols=255 Identities=36% Similarity=0.541 Sum_probs=236.0
Q ss_pred CCCCCCCCCcc--ccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEe
Q psy9913 8 SGKPGKSPEVP--EVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICT 85 (309)
Q Consensus 8 ~~~~~~v~~~R--~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~ 85 (309)
....+++.++| ++||++||+.||+|++++.++++++++.++||+||.||++.+++.+.++|+++.+.++.+||+++++
T Consensus 20 ~~~~~~i~~~R~~~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~f~~iv~~ 99 (286)
T 3tav_A 20 GSMVGLFGRKKTVEQRTPGELDAMAAAGSIVGAALVAVRDAAKAGVSTLELDQVAESVIREAGAVPSFLGYHGFPASICS 99 (286)
T ss_dssp ---CCTTCSCSBCCBCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSEEE
T ss_pred HHHHHHHHHhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCcccccccCCCCCceEE
Confidence 34467899999 9999999999999999999999999999999999999999999999999998765555679999999
Q ss_pred cCCCccccCCCC-CcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHH
Q psy9913 86 SVNNVACHGIPD-SRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGS 164 (309)
Q Consensus 86 g~~~~~~h~~p~-~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~ 164 (309)
|.|+..+|+.|+ +++|++||+|++|+|++|+||++|++|||++|+++++++++|++++++++++++.+|||++++||++
T Consensus 100 g~n~~~~H~~p~~~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~~~~~i~~ 179 (286)
T 3tav_A 100 SVNDQVVHGIPSATAVLADGDLVSIDCGAILDGWHGDSAWTFAVGTVIPSDEALSEATRLSMEAGIAAMIPGNRLTDVSH 179 (286)
T ss_dssp EETTBCSCCCCCTTCBCCTTCEEEEEEEEEETTEEEEEEEEEESSSCCHHHHHHHHHHHHHHHHHHHTCCTTCBHHHHHH
T ss_pred ecCccccCCCCCCCcccCCCCEEEEEEEEEECCEEEeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 999999999999 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH----HhC--CceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeecccccccccccc
Q psy9913 165 IIENVA----KQN--KLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFH 238 (309)
Q Consensus 165 ~~~~~~----~~~--g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~ 238 (309)
++++++ +++ |+...+ +++|||+|+.+|
T Consensus 180 ~~~~~~~~~~~~~~~g~~~~~-----------------------------------------------~~~GHgiG~~~h 212 (286)
T 3tav_A 180 AIELGTRAAEKQFDRAFGIVD-----------------------------------------------GYGGHGIGRSMH 212 (286)
T ss_dssp HHHHHHHHHHHHHTCCCEECT-----------------------------------------------TCCEEECSSSSS
T ss_pred HHHHHHHHHHHHhcCCCcccC-----------------------------------------------CcccCccccccc
Confidence 999999 887 765432 889999999999
Q ss_pred CCCcccccC-CCCCCCccCCcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 239 GPPDIFHTK-NDYPGKMEPGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 239 e~p~i~~~~-~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
|.|.+.++. ++.+.+|++||||++||++|.+...+..++|+|++.++++.+++|+||||+||++|+|+||.
T Consensus 213 E~P~i~~~~~~~~~~~L~~GmV~tiEPgiy~~~~~~~~~~~~w~~~t~dg~~gvriEd~v~Vt~~G~e~LT~ 284 (286)
T 3tav_A 213 LDPFLPNEGAPGKGPLLAVGSVLAIEPMLTLGTTQTRVLADDWTVVTTDGSRAAHWEHTVAVTEAGPRILTM 284 (286)
T ss_dssp EEEEECSSCCSSCSSBCCTTBEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECBEEEECCTTSCEESSC
T ss_pred CCccccCcCCCCCCCCcCCCCEEEEcCEEEcCCCceEecCCCceEEecCCCcEEEeeeEEEECCCcceeCCC
Confidence 999987643 35678999999999999999998888889999999999999999999999999999999995
No 4
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A
Probab=100.00 E-value=1.1e-56 Score=405.53 Aligned_cols=247 Identities=47% Similarity=0.752 Sum_probs=232.3
Q ss_pred CccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCccccCC
Q psy9913 16 EVPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVACHGI 95 (309)
Q Consensus 16 ~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~h~~ 95 (309)
++|++||++||+.||+|++++.++++++++.++||+||.||++.+++.+.++|+++.+.++.+|++++++|.|+..+|+.
T Consensus 37 ~~R~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~pG~tE~el~~~~~~~~~~~G~~~~~~~~~~f~~iv~~g~n~~~~H~~ 116 (285)
T 3pka_A 37 SEPWVQTPEVIEKMRVAGRIAAGALAEAGKAVAPGVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLNEVICHGI 116 (285)
T ss_dssp CSCSBCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEETTEEECCC
T ss_pred cceecCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCccccccccCCCCceEecccceeecCC
Confidence 69999999999999999999999999999999999999999999999999999988766666799999999999999999
Q ss_pred CCCcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhCCc
Q psy9913 96 PDSRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQNKL 175 (309)
Q Consensus 96 p~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~g~ 175 (309)
|++++|++||+|++|+|++|+||++|++|||++|+++++++++|++++++++++++++|||++++||+++++++++++|+
T Consensus 117 p~~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~~~~di~~~~~~~~~~~G~ 196 (285)
T 3pka_A 117 PDSTVITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLVDRTREATMRAINTVKPGRALSVIGRVIESYANRFGY 196 (285)
T ss_dssp CCSCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCCTTSBTTHHHHHHHHHHHTTTC
T ss_pred CCCcccCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred eecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCcccccC-CCCCCCc
Q psy9913 176 RVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIFHTK-NDYPGKM 254 (309)
Q Consensus 176 ~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~~~~-~~~~~~l 254 (309)
.... |++|||+|+++||.|.+.++. ++.+.+|
T Consensus 197 ~~~~-----------------------------------------------~~~GHgiG~~~hE~P~i~~~~~~~~~~~L 229 (285)
T 3pka_A 197 NVVR-----------------------------------------------DFTGHGIGTTFHNGLVVLHYDQPAVETIM 229 (285)
T ss_dssp EECC-----------------------------------------------SSCEEBCSSSSSCSCEECSSCCTTCCCBC
T ss_pred ccCC-----------------------------------------------CcccccCCCcccCCCcccCccCCCCCCcc
Confidence 6432 899999999999999987543 3567899
Q ss_pred cCCcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 255 EPGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 255 ~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
++||||++||++|.+...+..++++|+..+.++.+++|+||||+||++|+|+||.
T Consensus 230 ~~Gmv~tiEPgiy~~~~~~~~~~~gw~~~~~~g~~gvriEdtv~Vt~~G~e~LT~ 284 (285)
T 3pka_A 230 QPGMTFTIEPMINLGALDYEIWDDGWTVVTKDRKWTAQFEHTLLVTDTGVEILTC 284 (285)
T ss_dssp CTTBEEEECCEEESSCSCEEECTTSCCEEETTCCCEEECBEEEEECSSSEEESSC
T ss_pred CCCCEEEEcCEEEcCCCceeecCCCceEEecCCCcEEEEeeEEEECCCcCeECCC
Confidence 9999999999999988777888999999999999999999999999999999995
No 5
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei}
Probab=100.00 E-value=4.2e-57 Score=417.11 Aligned_cols=251 Identities=45% Similarity=0.733 Sum_probs=233.2
Q ss_pred CCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCcc
Q psy9913 12 GKSPEVPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVA 91 (309)
Q Consensus 12 ~~v~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~ 91 (309)
..+...|.|||++||++||+|++|+.++++.+++.++||+||.||++.+.+.+.++|+.++..++.+|++++|+|.|...
T Consensus 55 ~~~~~~~~VKs~~EI~~mR~A~~i~~~a~~~~~~~ikpG~te~el~~~~~~~~~~~g~~~~~~~~~~fp~iv~~g~n~~~ 134 (337)
T 4fuk_A 55 NIQFLHDDSKKTAEIQRIKTVCQLSREVLDIATAAAKPGITTDELDRIVHEATVERNMYPSPLNYYGFPKSVCTSVNEVI 134 (337)
T ss_dssp CCTTTTCTTC--CHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEETTEE
T ss_pred cchhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCccCCCCCCcCceeeccccccc
Confidence 34556899999999999999999999999999999999999999999999999999999888778899999999999999
Q ss_pred ccCCCCCcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHH
Q psy9913 92 CHGIPDSRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAK 171 (309)
Q Consensus 92 ~h~~p~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~ 171 (309)
+|+.|++++|++||+|++|+|+.|+||++|++|||++|+++++++++|++++++++++++++|||++++||++++++.++
T Consensus 135 ~H~~~~~~~l~~GD~v~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~l~~~v~ea~~~ai~~~kpG~~~~di~~~~~~~~~ 214 (337)
T 4fuk_A 135 CHGIPDSRELEEGDILNIDVSSYLNGFHGDLNETVFIGRPDDDSVRLVHAAYECLCAGIGVVKPEALYKQVGDAIEACAS 214 (337)
T ss_dssp ECCCCCSCBCCTTCEEEEEEEEEETTEEEEEEEEEESSSCCHHHHHHHHHHHHHHHHHHTTCSTTCBTTHHHHHHHHHHH
T ss_pred cCCCCCCccccCCCEEEEecceeECCEEEeeeeeEEeCCccHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCcccccC-CCC
Q psy9913 172 QNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIFHTK-NDY 250 (309)
Q Consensus 172 ~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~~~~-~~~ 250 (309)
+.|+..++ |++|||+|+.+|+.|.+.++. ++.
T Consensus 215 ~~g~~~~~-----------------------------------------------~~~GHGIG~~~he~p~~~~~~~~~~ 247 (337)
T 4fuk_A 215 QYQCSVVR-----------------------------------------------TYTGHGVGHLFHTSPTVCHYANNKS 247 (337)
T ss_dssp TTTCEECS-----------------------------------------------SEEEEECSSSSSEEEEECCSCC---
T ss_pred HhcCCccc-----------------------------------------------CcccCCCCCccccCCcccccccCCC
Confidence 98876543 899999999999999887643 345
Q ss_pred CCCccCCcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 251 PGKMEPGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 251 ~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
+.+|++||||||||++|.+......++|+|+..++|+..|+|+|||||||++|+|+||.
T Consensus 248 ~~~L~~GMV~TIEPgiy~~~~~~~~~~D~wt~~t~dg~~gvriEd~VlVTe~G~EvLT~ 306 (337)
T 4fuk_A 248 LGMMRPGHVFTIEPMINLGTWQDVTWPDKWTSTTKDGRRSAQFEHTMVVTNGGVEIFTD 306 (337)
T ss_dssp CCBCCTTCEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECBEEEEECSSSEEESSC
T ss_pred CCEeCCCCEEEECCeeEcCCCcceEcCCCCeEEecCCceEEEeccEEEEcCCcCEECCC
Confidence 67999999999999999999888889999999999999999999999999999999994
No 6
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=100.00 E-value=8.6e-57 Score=401.80 Aligned_cols=248 Identities=34% Similarity=0.553 Sum_probs=231.2
Q ss_pred CCccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCccccC
Q psy9913 15 PEVPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVACHG 94 (309)
Q Consensus 15 ~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~h~ 94 (309)
..||++||++||+.||+|++++.++++.+++.++||+||.||++.+++.+.++|+.+.+..+.+||+++++|.|+..+|+
T Consensus 11 ~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~f~~~v~~g~n~~~~H~ 90 (262)
T 1o0x_A 11 HHMIRIKTPSEIEKMKKAGKAVAVALREVRKVIVPGKTAWDVETLVLEIFKKLRVKPAFKGYGGYKYATCVSVNEEVVHG 90 (262)
T ss_dssp --CCCCCCHHHHHHHHHHHHHHHHHHHHGGGGCSTTCBHHHHHHHHHHHHHHHTCEESSTTGGGCCCSEEEEETTBCSCC
T ss_pred ccccccCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCcHHHHHHHHHHHHHHcCCccccccccCCCcceEecccccccCC
Confidence 46999999999999999999999999999999999999999999999999999998766555679999999999999999
Q ss_pred CCCCcc-cCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhC
Q psy9913 95 IPDSRP-LEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQN 173 (309)
Q Consensus 95 ~p~~~~-l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~ 173 (309)
.|++++ |++||+|++|+|++|+||++|++|||++|+++++++++|++++++++++++++|||++++||+++++++++++
T Consensus 91 ~p~~~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~~~~~v~~~~~~~~~~~ 170 (262)
T 1o0x_A 91 LPLKEKVFKEGDIVSVDVGAVYQGLYGDAAVTYIVGETDERGKELVRVTREVLEKAIKMIKPGIRLGDVSHCIQETVESV 170 (262)
T ss_dssp CCCTTCBCCTTCEEEEEEEEEETTEEEEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHTCCTTSBHHHHHHHHHHHHHHT
T ss_pred CCCCCcccCCCCEEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHc
Confidence 999999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCcccccC-CCCCC
Q psy9913 174 KLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIFHTK-NDYPG 252 (309)
Q Consensus 174 g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~~~~-~~~~~ 252 (309)
|+...+ +++|||+|+.+||.|.+.++. ++.+.
T Consensus 171 G~~~~~-----------------------------------------------~~~GHgiG~~~he~p~i~~~~~~~~~~ 203 (262)
T 1o0x_A 171 GFNVIR-----------------------------------------------DYVGHGVGRELHEDPQIPNYGTPGTGV 203 (262)
T ss_dssp TCEECC-----------------------------------------------SSCEEECSSSSSEEEEECSCCCTTCSC
T ss_pred CCcccC-----------------------------------------------CcccCcccccccCCCccCCCCCCCCCC
Confidence 886432 899999999999999876542 34578
Q ss_pred CccCCcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 253 KMEPGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 253 ~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
+|++||||++||++|.+.++++.++++|+..++++.+++|+||||+||++|+|+||.
T Consensus 204 ~L~~Gmv~tiEPgi~~g~~~v~~~~~~w~~~~~~g~~gvriEdtvlVt~~G~e~LT~ 260 (262)
T 1o0x_A 204 VLRKGMTLAIEPMVSEGDWRVVVKEDGWTAVTVDGSRCAHFEHTILITENGAEILTK 260 (262)
T ss_dssp BCCTTCEEEECCEEESSCCCEEECTTSSCEEETTCCCEEECBEEEEECSSSEEESSC
T ss_pred ccCCCCEEEECCEEEcCCCceeecCCCceEEeeCCCcEEEEEEEEEECCCccEeCCC
Confidence 999999999999999988888888999999999999999999999999999999995
No 7
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...
Probab=100.00 E-value=2.4e-56 Score=399.26 Aligned_cols=246 Identities=41% Similarity=0.721 Sum_probs=230.5
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHH-HHHCCCccCCCCCCCCCceeEecCCCccccCC
Q psy9913 17 VPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHEL-IINNGAYPSPLNYKGYPKSICTSVNNVACHGI 95 (309)
Q Consensus 17 ~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~-~~~~G~~~~~~~~~~~~~~v~~g~~~~~~h~~ 95 (309)
||++||++||+.||+|++++.++++.+++.++||+||.||++.+++. +.++|+.+.+..+.+|++++++|.|+..+|+.
T Consensus 1 m~~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~te~el~~~~~~~~~~~~g~~~~~~~~~~f~~iv~~g~n~~~~H~~ 80 (263)
T 2gg2_A 1 AISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGI 80 (263)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHGGGCSTTCBHHHHHHHHHHHHHHTSCCEESSTTGGGCCSSSEEEETTEEECCC
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHhCCccccccccCCCcceEecccccccCCC
Confidence 68999999999999999999999999999999999999999999999 88899987666666899999999999999999
Q ss_pred CCC-cccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhCC
Q psy9913 96 PDS-RPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQNK 174 (309)
Q Consensus 96 p~~-~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~g 174 (309)
|++ ++|++||+|++|+|++|+||++|++|||++|+++++++++|++++++++++++++|||++++||++++++++++.|
T Consensus 81 p~~~~~l~~gd~v~iD~G~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~~~~~v~~~~~~~~~~~G 160 (263)
T 2gg2_A 81 PDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEG 160 (263)
T ss_dssp CCTTCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHHCSTTCBHHHHHHHHHHHHHHTT
T ss_pred CCCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcC
Confidence 998 9999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCcccccC-CCCCCC
Q psy9913 175 LRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIFHTK-NDYPGK 253 (309)
Q Consensus 175 ~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~~~~-~~~~~~ 253 (309)
+...+ +++|||+|+++||.|.+.++. ++.+.+
T Consensus 161 ~~~~~-----------------------------------------------~~~GHgiG~~~he~p~i~~~~~~~~~~~ 193 (263)
T 2gg2_A 161 FSVVR-----------------------------------------------EYCGHGIGRGFHEEPQVLHYDSRETNVV 193 (263)
T ss_dssp CEECS-----------------------------------------------SCCEEECSSSSSEEEEECSSCCTTCCCB
T ss_pred CEECC-----------------------------------------------CcccccCCcceecCCcccCccCCCCCCC
Confidence 86433 889999999999999887542 356789
Q ss_pred ccCCcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 254 MEPGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 254 l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
|++||||++||++|.+..+++..+++|+..++++.+++|+||||+||++|+|+||.
T Consensus 194 l~~Gmv~tiEPgi~~~~~~~~~~~~~~~~~~~~g~~g~riEdtvlVt~~G~e~LT~ 249 (263)
T 2gg2_A 194 LKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVTDNGCEILTL 249 (263)
T ss_dssp CCTTCEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECBEEEEEETTEEEESSC
T ss_pred cCCCCEEEEecEEEcCCCceEEcCCCceEEecCCCeEEEEEEEEEECCCccEEeCC
Confidence 99999999999999988888888899999999999999999999999999999984
No 8
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum}
Probab=100.00 E-value=3.2e-56 Score=411.89 Aligned_cols=248 Identities=42% Similarity=0.736 Sum_probs=233.6
Q ss_pred CCccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCccccC
Q psy9913 15 PEVPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVACHG 94 (309)
Q Consensus 15 ~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~h~ 94 (309)
..++.|||++||+.||+|++++.++++++++.++||+||.||++.+++.+.++|++++++++.+||+++|+|.|+..+|+
T Consensus 98 ~~~~~IKs~~EIe~mR~A~~ia~~al~~~~~~ikpGvTE~El~~~~~~~~~~~Ga~ps~l~y~~Fp~iv~sg~N~~i~H~ 177 (368)
T 3s6b_A 98 KSDIYVNNEEEIQRIREACILGRKTLDYAHTLVSPGVTTDEIDRKVHEFIIKNNAYPSTLNYYKFPKSCCTSVNEIVCHG 177 (368)
T ss_dssp TTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSEEEEETTEEECC
T ss_pred cCCceeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCccccccccCCCCeEEEcCccccccC
Confidence 35789999999999999999999999999999999999999999999999999999887777789999999999999999
Q ss_pred CCCCcccCCCCeEEEeEEEEECCEEeeeEEEEEeC---CCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHH
Q psy9913 95 IPDSRPLEDGDIVNVDVTVYLNGYHGDCSATFCVG---EVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAK 171 (309)
Q Consensus 95 ~p~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG---~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~ 171 (309)
.|++++|++||+|+||+|+.|+||++|++|||++| +++++++++|++++++++++++++|||++++||+++++++++
T Consensus 178 ~p~~r~L~~GDiV~iD~G~~~~GY~sDitRT~~vGg~~~~s~e~~~ly~~v~ea~~aai~~ikPG~~~~dI~~aa~~~i~ 257 (368)
T 3s6b_A 178 IPDYRPLKSGDIINIDISVFYKGVHSDLNETYFVGDINDVPKEGKELVETCYFSLMEAIKKCKPGMFYKNIGTLIDAYVS 257 (368)
T ss_dssp CCCSCBCCTTCEEEEEEEEEETTEEEEEEEEEECSCGGGSCHHHHHHHHHHHHHHHHHHHHCCTTCBTHHHHHHHHHHHH
T ss_pred CCCCccccCCCEEEEEEeEEECcEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred hCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCcccccCC-CC
Q psy9913 172 QNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIFHTKN-DY 250 (309)
Q Consensus 172 ~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~~~~~-~~ 250 (309)
++|+..++ +++|||||+.+||.|.+.++.. +.
T Consensus 258 ~~G~~~~~-----------------------------------------------~~~GHGIG~~vHE~P~i~~~~~~~~ 290 (368)
T 3s6b_A 258 KKNFSVVR-----------------------------------------------SYSGHGVGKLFHSNPTVPHFKKNKA 290 (368)
T ss_dssp TTTCEECC-----------------------------------------------SCCEEECSSSSSEEEEECSSSSCCC
T ss_pred HcCCCccc-----------------------------------------------ceeeCCCCccccCCCccccccCCCC
Confidence 99886433 8999999999999999987542 45
Q ss_pred CCCccCCcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 251 PGKMEPGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 251 ~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
+.+|++||||+|||++|.+......++|+|+..+.+|.+++|+||||+||++|+|+||.
T Consensus 291 ~~~L~~GMVfTIEPgiy~~~~~~~~~~d~wt~~t~dG~~gvriEdtVlVTe~G~EvLT~ 349 (368)
T 3s6b_A 291 VGIMKPGHVFTIEPMINQGHYSDVLWPDQWTSATSDGKLSAQFEHTLLITNNGVEILTK 349 (368)
T ss_dssp CCBCCTTCEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECBEEEEEETTEEEETTC
T ss_pred CCEECCCCEEEEcCeEEcCcccccccCCCceeEeeCCccEEEEeEEEEEcCCcCeECCC
Confidence 67999999999999999988777789999999999999999999999999999999984
No 9
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=100.00 E-value=6.5e-56 Score=406.68 Aligned_cols=247 Identities=48% Similarity=0.768 Sum_probs=232.4
Q ss_pred CccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCccccCC
Q psy9913 16 EVPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVACHGI 95 (309)
Q Consensus 16 ~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~h~~ 95 (309)
.+|.+||++||+.||+|++++.++++++++.++||+||.||++.+++.+.++|++++++++.+||+++|+|.|...+|+.
T Consensus 71 ~~~~iKs~~EI~~mR~A~~ia~~al~~~~~~i~pGvte~el~~~~~~~~~~~G~~~~~~~y~~fp~iv~sg~n~~~~H~~ 150 (329)
T 2b3h_A 71 SQIKLLSSEDIEGMRLVCRLAREVLDVAAGMIKPGVTTEEIDHAVHLACIARNCYPSPLNYYNFPKSCCTSVNEVICHGI 150 (329)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEETTEEECCC
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHcCCccccccccCCCCeEEecCCCCcCCCC
Confidence 58999999999999999999999999999999999999999999999999999998877777899999999999999999
Q ss_pred CCCcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhCCc
Q psy9913 96 PDSRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQNKL 175 (309)
Q Consensus 96 p~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~g~ 175 (309)
|++++|++||+|++|+|+.|+||++|++|||++|+++++++++|++++++++++++++|||++++||++++++.+++.|+
T Consensus 151 p~~~~L~~GDiv~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~l~~~v~~a~~~ai~~~kPG~~~~dI~~~~~~~~~~~G~ 230 (329)
T 2b3h_A 151 PDRRPLQEGDIVNVDITLYRNGYHGDLNETFFVGEVDDGARKLVQTTYECLMQAIDAVKPGVRYRELGNIIQKHAQANGF 230 (329)
T ss_dssp CCSCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCCTTCBTTHHHHHHHHHHHHTTC
T ss_pred CCCcCCCCCCEEEEEeeEEECCEEEeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred eecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCcccccCCC-CCCCc
Q psy9913 176 RVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIFHTKND-YPGKM 254 (309)
Q Consensus 176 ~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~~~~~~-~~~~l 254 (309)
..++ +++|||+|+.+||.|.+.++..+ .+.+|
T Consensus 231 ~~~~-----------------------------------------------~~~GHGIG~~~HE~P~i~~~~~~~~~~~L 263 (329)
T 2b3h_A 231 SVVR-----------------------------------------------SYCGHGIHKLFHTAPNVPHYAKNKAVGVM 263 (329)
T ss_dssp EECC-----------------------------------------------SCCEEECSSSSSEEEEECCSSSCCCCCBC
T ss_pred CccC-----------------------------------------------CcccCCcCcccccCCcccccccCCCCCEE
Confidence 6433 88999999999999998765432 35899
Q ss_pred cCCcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 255 EPGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 255 ~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
++||||+|||++|.+......++++|+..+.++.+++|+||||+||++|+|+||.
T Consensus 264 ~~GMVftIEPgiy~~~~~~~~~~d~w~~~~~~G~~g~riEdtvlVTe~G~evLT~ 318 (329)
T 2b3h_A 264 KSGHVFTIEPMICEGGWQDETWPDGWTAVTRDGKRSAQFEHTLLVTDTGCEILTR 318 (329)
T ss_dssp CTTCEEEECCEEESSCCCEEECTTSCCEEETTCCCEEECBEEEEECSSSEEETTC
T ss_pred CCCCEEEEeCCcCcCcccccccCCCceeEeeCCeEEEEEeeEEEEcCCeeEECCC
Confidence 9999999999999887777778999999999999999999999999999999984
No 10
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*
Probab=100.00 E-value=3.2e-55 Score=389.56 Aligned_cols=242 Identities=37% Similarity=0.599 Sum_probs=224.6
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCccccCCCCCc
Q psy9913 20 VKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVACHGIPDSR 99 (309)
Q Consensus 20 iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~h~~p~~~ 99 (309)
+||++||+.||+|++++.++++.+++.++||+||.||++.+++.+.++|+++.+..+.+|++++++|.|+..+|+.|+++
T Consensus 3 iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~te~el~~~~~~~~~~~g~~~~~~~~~~f~~~v~~g~n~~~~H~~p~~~ 82 (252)
T 1qxy_A 3 VKTEEELQALKEIGYICAKVRNTMQAATKPGITTKELDNIAKELFEEYGAISAPIHDENFPGQTCISVNEEVAHGIPSKR 82 (252)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTCEEHHHHHHCCSSSSEEEETTEEECCCCCSC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEEcCCccccCCCCCCc
Confidence 99999999999999999999999999999999999999999999999998764322225888899999999999999999
Q ss_pred ccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCH-HHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhCCceec
Q psy9913 100 PLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDA-SGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQNKLRVV 178 (309)
Q Consensus 100 ~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~-~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~g~~~~ 178 (309)
+|++||+|++|+|++|+||++|++|||++|++++ +++++|++++++++++++++|||++++||+++++++++++|+...
T Consensus 83 ~l~~gd~v~iD~g~~~~gy~sD~tRT~~vG~~~~~~~~~~~~~~~~a~~~~i~~~kpG~~~~~i~~~~~~~~~~~g~~~~ 162 (252)
T 1qxy_A 83 VIREGDLVNIDVSALKNGYYADTGISFVVGESDDPMKQKVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTARQNDLKVI 162 (252)
T ss_dssp BCCTTCEEEEEEEEEETTEEEEEEEEEECSCCSCTHHHHHHHHHHHHHHHHHTTCCTTCBTHHHHHHHHHHHHHTTCEEC
T ss_pred CcCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEec
Confidence 9999999999999999999999999999999999 999999999999999999999999999999999999999988643
Q ss_pred ccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCC-cccccC-CCCCCCccC
Q psy9913 179 PEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPP-DIFHTK-NDYPGKMEP 256 (309)
Q Consensus 179 ~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p-~i~~~~-~~~~~~l~~ 256 (309)
+ |++|||+|+.+||.| .+.++. ++.+.+|++
T Consensus 163 ~-----------------------------------------------~~~GHgiG~~~he~p~~i~~~~~~~~~~~l~~ 195 (252)
T 1qxy_A 163 K-----------------------------------------------NLTGHGVGLSLHEAPAHVLNYFDPKDKTLLTE 195 (252)
T ss_dssp T-----------------------------------------------TCCEEECSSSSSEEEEEECSSCCTTCCCBCCT
T ss_pred C-----------------------------------------------CccccccCcccccCCccccCCCCCCCCCCccC
Confidence 3 889999999999999 876543 345789999
Q ss_pred CcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 257 GMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 257 gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
||||++||++|.+.++++.++++|+..++++.+++|+||||+||++| |+||.
T Consensus 196 Gmv~tiEPgi~~g~~~~~~~~~~~~~~~~~g~~g~riEdtvlVt~~G-e~Lt~ 247 (252)
T 1qxy_A 196 GMVLAIEPFISSNASFVTEGKNEWAFETSDKSFVAQIEHTVIVTKDG-PILTT 247 (252)
T ss_dssp TBEEEECCEEESSCSSCEECSSSSCEECTTCCCEEEEEEEEECCTTC-CEETT
T ss_pred CCEEEEecEEEcCCCceEecCCCceEEecCCCcEEEEEEEEEECCCc-eEccC
Confidence 99999999999998888888999999999999999999999999999 99984
No 11
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis}
Probab=100.00 E-value=4.2e-52 Score=387.13 Aligned_cols=233 Identities=25% Similarity=0.416 Sum_probs=213.1
Q ss_pred ccCCCCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeE
Q psy9913 5 EFASGKPGKSPEVPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSIC 84 (309)
Q Consensus 5 ~~~~~~~~~v~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~ 84 (309)
++++. ++++..+|++||++||+.||+|++++++++..+++.++||+||.||++.+++.++++|+.+. +|+++++
T Consensus 116 ~~~~~-~~~~~~~R~iK~~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~te~e~~~~~~~~~~~~g~~~~-----~f~~iv~ 189 (356)
T 3q6d_A 116 EFIPT-SGLVEKLRLIKTDSEIKILKEAAQIADAAFEHILSFIRPGVSEIEVSNELEFFMRKQGATSS-----SFDIIVA 189 (356)
T ss_dssp EEEEE-CSHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTTCCTTCBHHHHHHHHHHHHHHTTCSEE-----SSCCEEE
T ss_pred ceecc-hhhhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHCCCCcC-----CCCCEEE
Confidence 34444 56788999999999999999999999999999999999999999999999999999998752 5899999
Q ss_pred ecCCCccccCCCCCcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHH
Q psy9913 85 TSVNNVACHGIPDSRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGS 164 (309)
Q Consensus 85 ~g~~~~~~h~~p~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~ 164 (309)
+|.|...+|+.|++++|++||+|++|+|++|+||++|++|||++|+++++++++|++++++++++++++|||++++||++
T Consensus 190 ~g~n~~~~H~~~~~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~ 269 (356)
T 3q6d_A 190 SGLRSALPHGVASEKVIETGDFVTLDFGAYYKGYCSDITRTIAVGEPSDKLKEIYNIVLEAQLRGVNGIKAGLTGREADA 269 (356)
T ss_dssp EGGGGGCTTCBCCSCBCCTTCEEEEEECEEETTEECCEEEEEESSCCCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHH
T ss_pred EcCccccCCCCCCCcccCCCCEEEEEEeEEECCEEeeeEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCccc
Q psy9913 165 IIENVAKQNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIF 244 (309)
Q Consensus 165 ~~~~~~~~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~ 244 (309)
+++++++++|+ +++|. |.+|||+|+++||.|.+.
T Consensus 270 ~~~~~~~~~g~-----------~~~~~-----------------------------------h~~GHgiGl~~he~p~i~ 303 (356)
T 3q6d_A 270 LTRDYITEKGY-----------GEYFG-----------------------------------HSTGHGIGLEIHEAPGLA 303 (356)
T ss_dssp HHHHHHHHTTC-----------GGGCC-----------------------------------SCSEEECSSSSSEEEEES
T ss_pred HHHHHHHHcCC-----------cccCC-----------------------------------CCCcccCCCCcCcCCCCC
Confidence 99999999865 34443 899999999999999875
Q ss_pred ccCCCCCCCccCCcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 245 HTKNDYPGKMEPGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 245 ~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
+ ..+.+|++||||++||++|.++ .+|+|+||||+||++|+|+||.
T Consensus 304 ~---~~~~~l~~Gmv~tiEPgiy~~g-----------------~~gvriEd~v~vt~~G~e~Lt~ 348 (356)
T 3q6d_A 304 F---RSDTVLEPGMAVTVEPGIYIPG-----------------IGGVRIEDDIIVTSEGNEVITK 348 (356)
T ss_dssp T---TCCCBCCTTCEEEECCEEEETT-----------------TEEEECBEEEEECSSSEEECCC
T ss_pred C---CCCCCcCCCCEEEECCEEEECC-----------------CCeEEEccEEEEeCCcceeCCC
Confidence 3 5678999999999999999643 2378999999999999999984
No 12
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}
Probab=100.00 E-value=3.7e-52 Score=387.81 Aligned_cols=233 Identities=20% Similarity=0.334 Sum_probs=213.1
Q ss_pred ccCCCCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeE
Q psy9913 5 EFASGKPGKSPEVPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSIC 84 (309)
Q Consensus 5 ~~~~~~~~~v~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~ 84 (309)
++++. +++++.+|++||++||+.||+|++++.+++..+++.++||+||.||++.+++.+.++|+.+ .+|+++++
T Consensus 119 ~~v~~-~~~i~~lr~iK~~~Ei~~~r~a~~~~~~~~~~~~~~~~~G~te~e~~~~~~~~~~~~g~~~-----~~f~~iv~ 192 (359)
T 2zsg_A 119 KFIGI-DDEVKQMRMVKDEGEIEKIKQAIEISERAFLETVQQIRAGMTEKEIAALLEYTMRKEGAEG-----VAFDTIVA 192 (359)
T ss_dssp EEEEC-HHHHHHHHHBCCHHHHHHHHHHHHHHHHHHHHHHTTCCTTCBHHHHHHHHHHHHHHTTCSE-----ESSCCEEE
T ss_pred EEEEC-hhhhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCC-----CCCCCEEE
Confidence 44444 4678899999999999999999999999999999999999999999999999999999875 25999999
Q ss_pred ecCCCccccCCCCCcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHH
Q psy9913 85 TSVNNVACHGIPDSRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGS 164 (309)
Q Consensus 85 ~g~~~~~~h~~p~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~ 164 (309)
+|.|+..+|+.|++++|++||+|++|+|++|+||++|++|||++|+++++++++|++++++++++++++|||++++||++
T Consensus 193 ~g~~~~~~h~~~~~~~l~~gd~v~iD~g~~~~gy~~D~tRt~~~G~~~~~~~~~~~~v~~~~~~~~~~~~pG~~~~~v~~ 272 (359)
T 2zsg_A 193 SGCRSALPHGKASDKVVERGDVIVIDFGATYENYCADITRVVSIGEPSDEVKEVHSIVLEAQERALKIAKAGVTGKLLDS 272 (359)
T ss_dssp EGGGGGSTTCCCCSCBCCTTCEEEEEECEEETTEECCEEEEEESSSCCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHH
T ss_pred EccccccccCCCCCcccCCCCEEEEEEeEEECCEEEeeeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCccc
Q psy9913 165 IIENVAKQNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIF 244 (309)
Q Consensus 165 ~~~~~~~~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~ 244 (309)
+++++++++|+ +++|. |.+|||+|+++||.|.+.
T Consensus 273 ~~~~~~~~~g~-----------~~~~~-----------------------------------h~~GHgiGl~~he~p~i~ 306 (359)
T 2zsg_A 273 VAREFIREKGY-----------GEFFG-----------------------------------HSLGHGIGLEVHEGPAIS 306 (359)
T ss_dssp HHHHHHHHTTC-----------GGGBC-----------------------------------SCSEEECSSSSSEEEEES
T ss_pred HHHHHHHHcCC-----------cccCC-----------------------------------CCCccccCcccCCCCCcC
Confidence 99999998865 34443 899999999999999775
Q ss_pred ccCCCCCCCccCCcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 245 HTKNDYPGKMEPGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 245 ~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
+ +.+.+|++||||++||++|.++ .+|+|+||||+||++|+|+||.
T Consensus 307 ~---~~~~~l~~gmv~tiEPgiy~~~-----------------~~gvriEd~v~vt~~g~e~Lt~ 351 (359)
T 2zsg_A 307 F---RNDSPLPENVVFTVEPGIYLEG-----------------KFGIRIEEDVVLKEQGCEILTT 351 (359)
T ss_dssp T---TCCCBCCTTBEEEECCEEEETT-----------------TEEEECBEEEEEETTEEEECCC
T ss_pred C---CCCCCcCCCCEEEECCEEEECC-----------------CcEEEEeeEEEEcCCcceECCC
Confidence 3 5678999999999999999642 2378999999999999999984
No 13
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans}
Probab=100.00 E-value=9.5e-52 Score=387.23 Aligned_cols=233 Identities=22% Similarity=0.281 Sum_probs=211.9
Q ss_pred cccCCCCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCcee
Q psy9913 4 CEFASGKPGKSPEVPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSI 83 (309)
Q Consensus 4 ~~~~~~~~~~v~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v 83 (309)
+++++. ++++..+|++||++||+.||+|+++++++++.+++.++||+||.||++.+++.+.++|+.+. +| +++
T Consensus 135 ~~~~~~-~~~i~~~R~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~~-----~f-~iv 207 (378)
T 4ege_A 135 VLPVLA-TDVLRQLRMVKEAAEVDALAKAGAAIDRVHARVPAFLVPGRTEAQVAADIAEAIVAEGHSAV-----AF-VIV 207 (378)
T ss_dssp SCCEES-HHHHHHHHTBCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCSEE-----EE-EEE
T ss_pred CeEEEc-HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCC-----Ce-eEE
Confidence 344444 46678999999999999999999999999999999999999999999999999999998752 47 678
Q ss_pred EecCCCccccCCCCCcccCCCCeEEEeEEEEE-CCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHH
Q psy9913 84 CTSVNNVACHGIPDSRPLEDGDIVNVDVTVYL-NGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTI 162 (309)
Q Consensus 84 ~~g~~~~~~h~~p~~~~l~~gd~v~iD~g~~~-~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv 162 (309)
++|.|...+|+.|++++|++||+|++|+|++| +||++|++|||++|+++++++++|++++++++++++++|||++++||
T Consensus 208 ~sG~n~~~~H~~~~~~~l~~Gd~v~iD~G~~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~~pG~~~~~v 287 (378)
T 4ege_A 208 GSGPHGADPHHGYSDRKLQVGDIVVVDIGGTYEPGYYSDSTRTYSIGDPSPDVAQQYSALQRAQRAAVDAVRPGVTAAQV 287 (378)
T ss_dssp EEGGGGGCTTCCCCSCBCCTTCEEEEEEEEEETTTEECCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHH
T ss_pred EeeCCCCccCCCCCCCCcCCCCEEEEEEEEEECCeEEEccEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHH
Confidence 89999999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCc
Q psy9913 163 GSIIENVAKQNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPD 242 (309)
Q Consensus 163 ~~~~~~~~~~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~ 242 (309)
+++++++++++|+ +++|. |.+|||+|+++||.|.
T Consensus 288 ~~~~~~~~~~~G~-----------~~~~~-----------------------------------h~~GHgiGl~~hE~P~ 321 (378)
T 4ege_A 288 DAAARDVLADAGL-----------AEYFV-----------------------------------HRTGHGIGLCVHEEPY 321 (378)
T ss_dssp HHHHHHHHHHTTC-----------GGGCC-----------------------------------SCSEEECSSSSSEEEE
T ss_pred HHHHHHHHHHcCC-----------CCcCC-----------------------------------CCCcccCCCCcCCCCc
Confidence 9999999999865 34443 8999999999999998
Q ss_pred ccccCCCCCCCccCCcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 243 IFHTKNDYPGKMEPGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 243 i~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
+.. +.+.+|++||||++||++|.++ .+|+|+||||+||++|+|+||.
T Consensus 322 i~~---~~~~~L~~Gmv~tiEPgiy~~g-----------------~~gvriEd~v~Vt~~G~e~Lt~ 368 (378)
T 4ege_A 322 IVA---GNELPLVAGMAFSIEPGIYFPG-----------------RWGARIEDIVVVTENGALSVNN 368 (378)
T ss_dssp ECT---TCCCBCCTTBEEEECCEEEETT-----------------TEEEECBEEEEEETTEEEESCC
T ss_pred cCC---CCCCccCCCCEEEECCEEEeCC-----------------ccEEEEeeEEEEeCCcCeECCC
Confidence 753 5678999999999999999643 3478999999999999999984
No 14
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A
Probab=100.00 E-value=1.2e-51 Score=383.21 Aligned_cols=232 Identities=25% Similarity=0.386 Sum_probs=211.7
Q ss_pred ccCCCCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeE
Q psy9913 5 EFASGKPGKSPEVPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSIC 84 (309)
Q Consensus 5 ~~~~~~~~~v~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~ 84 (309)
++++. +.++..+|++||++||+.||+|++++.++++.+++.++||+||.||++.+++.+.++|+.+ .+|+++++
T Consensus 113 ~~~~~-~~~i~~~r~iK~~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~te~el~~~~~~~~~~~g~~~-----~~f~~iv~ 186 (351)
T 1wy2_A 113 EFKKV-DDVIRDMRIIKSEKEIKIIEKACEIADKAVMAAIEEITEGKKEREVAAKVEYLMKMNGAEK-----PAFDTIIA 186 (351)
T ss_dssp EEEEC-HHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCSE-----ESSCCEEE
T ss_pred eEEEc-HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCC-----CCCCCEEE
Confidence 44444 4567899999999999999999999999999999999999999999999999999999875 35999999
Q ss_pred ecCCCccccCCCCCcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHH
Q psy9913 85 TSVNNVACHGIPDSRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGS 164 (309)
Q Consensus 85 ~g~~~~~~h~~p~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~ 164 (309)
+|.|+..+|+.|++++|++||+|++|+|++|+||++|++|||++|+++++++++|++++++++++++++|||++++||++
T Consensus 187 ~g~n~~~~H~~~~~~~l~~gd~v~iD~G~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~~pG~~~~~v~~ 266 (351)
T 1wy2_A 187 SGYRSALPHGVASDKRIERGDLVVIDLGALYQHYNSDITRTIVVGSPNEKQKEIYEIVLEAQKKAVESAKPGITAKELDS 266 (351)
T ss_dssp EGGGGGSTTCBCCSCBCCTTCEEEEEECEEETTEECCEEEEEESSCCCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHH
T ss_pred EccccccccCCCCCcccCCCCEEEEEEEEEECCEEecceEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCccc
Q psy9913 165 IIENVAKQNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIF 244 (309)
Q Consensus 165 ~~~~~~~~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~ 244 (309)
+++++++++|+ +++|. |.+|||+|+++||.|.+.
T Consensus 267 ~~~~~~~~~g~-----------~~~~~-----------------------------------h~~GHgiGl~~hE~p~i~ 300 (351)
T 1wy2_A 267 IARNIIAEYGY-----------GEYFN-----------------------------------HSLGHGVGLEVHEWPRVS 300 (351)
T ss_dssp HHHHHHHHTTC-----------GGGCC-----------------------------------SCSEEECSSSSSEEEEES
T ss_pred HHHHHHHHcCC-----------cccCC-----------------------------------CCcccccCCCcCCCCccC
Confidence 99999999865 33443 999999999999999774
Q ss_pred ccCCCCCCCccCCcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCee-ecCC
Q psy9913 245 HTKNDYPGKMEPGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYK-VLTY 309 (309)
Q Consensus 245 ~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e-~LT~ 309 (309)
++.+.+|++||||++||++|.++ .+|+|+||+|+|| +|+| +||.
T Consensus 301 ---~~~~~~l~~Gmv~tiEPgiy~~g-----------------~~gvriEd~v~Vt-~G~e~~Lt~ 345 (351)
T 1wy2_A 301 ---QYDETVLREGMVITIEPGIYIPK-----------------IGGVRIEDTILIT-KNGSKRLTK 345 (351)
T ss_dssp ---TTCCCBCCTTCEEEECCEEEETT-----------------TEEEECBEEEEEE-TTEEEESCC
T ss_pred ---CCCCCCcCCCCEEEECCEEEeCC-----------------CCeEEEeeEEEEC-CCceecCCC
Confidence 35678999999999999999643 2368999999999 9999 9984
No 15
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A
Probab=100.00 E-value=9.4e-52 Score=384.64 Aligned_cols=227 Identities=25% Similarity=0.324 Sum_probs=208.9
Q ss_pred CCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCc
Q psy9913 11 PGKSPEVPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNV 90 (309)
Q Consensus 11 ~~~v~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~ 90 (309)
+.++..+|++||++||+.||+|++++.+++.++++.++||+||.||++.+++.+.++ +.+ .+|++++++|.|+.
T Consensus 122 ~~~i~~~R~iK~~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~te~el~~~~~~~~~~~-~~~-----~~f~~iv~~g~n~~ 195 (356)
T 1wn1_A 122 SSLIKELRMIKDKEEVKMMEHASRIADKVFEEILTWDLIGMKERELALKIELLIREL-SDG-----IAFEPIVASGENAA 195 (356)
T ss_dssp HHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTSCCTTCBHHHHHHHHHHHHHHH-SSE-----ESSCCEEEEGGGGG
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHh-CcC-----CCCCcEEEEecccc
Confidence 456789999999999999999999999999999999999999999999999999988 553 35899999999999
Q ss_pred cccCCCCCcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHH
Q psy9913 91 ACHGIPDSRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVA 170 (309)
Q Consensus 91 ~~h~~p~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~ 170 (309)
.+|+.|++++|++||+|++|+|++|+||++|++|||++|+++++++++|++++++++++++++|||++++||++++++++
T Consensus 196 ~~H~~~~~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~ 275 (356)
T 1wn1_A 196 NPHHEPGERKIRKGDIIILDYGARWKGYCSDITRTIGLGELDERLVKIYEVVKDAQESAFKAVREGIKAKDVDSRAREVI 275 (356)
T ss_dssp CTTCCCCSCBCCTTCEEEEEECEEETTEECCEEEEEESSSCCHHHHHHHHHHHHHHHHHHHHCBTTSBHHHHHHHHHHHH
T ss_pred cccCCCCCCeecCCCEEEEEEEEEECCEEeccEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCcccccCCCC
Q psy9913 171 KQNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIFHTKNDY 250 (309)
Q Consensus 171 ~~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~~~~~~~ 250 (309)
+++|+ +++|. |.+|||+|+++||.|.+.. +.
T Consensus 276 ~~~g~-----------~~~~~-----------------------------------h~~GHgiGl~~he~p~i~~---~~ 306 (356)
T 1wn1_A 276 SKAGY-----------GEYFI-----------------------------------HRTGHGLGLDVHEEPYIGP---DG 306 (356)
T ss_dssp HTTTC-----------GGGCC-----------------------------------SCSEEECSSSSSEEEEEST---TC
T ss_pred HHcCC-----------cccCC-----------------------------------CCCcccCCCccCCCcccCC---CC
Confidence 98765 34443 9999999999999998753 56
Q ss_pred CCCccCCcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 251 PGKMEPGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 251 ~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
+.+|++||||++||++|.++ .+|+|+||||+||++|+|+||.
T Consensus 307 ~~~l~~Gmv~tiEPgiy~~g-----------------~~gvriEd~v~Vt~~g~e~Lt~ 348 (356)
T 1wn1_A 307 EVILKNGMTFTIEPGIYVPG-----------------LGGVRIEDDIVVDEGKGRRLTK 348 (356)
T ss_dssp CCBCCTTCEEEECCEEEETT-----------------TEEEECBEEEEEETTEEEESCC
T ss_pred CCCcCCCCEEEECCeeEeCC-----------------CcEEEEeeEEEEeCCccEECCC
Confidence 78999999999999999643 2368999999999999999984
No 16
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus}
Probab=100.00 E-value=2.8e-51 Score=384.41 Aligned_cols=228 Identities=23% Similarity=0.284 Sum_probs=208.8
Q ss_pred CCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHC-CCccCCCCCCCCCceeEecCCC
Q psy9913 11 PGKSPEVPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINN-GAYPSPLNYKGYPKSICTSVNN 89 (309)
Q Consensus 11 ~~~v~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~-G~~~~~~~~~~~~~~v~~g~~~ 89 (309)
+.++.++|+|||++||+.||+|++++.+++.++++.++||+||.||++.++..+.++ |... .+|++++++|.|.
T Consensus 141 ~~~i~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~~~G~tE~el~~~~~~~~~~~~g~~~-----~~f~~iv~~G~n~ 215 (377)
T 4fkc_A 141 SPVISELREIKDKDEIKAHKKAAEIVDKVFYRFIEGKLEGKSERELANRIEYMIKNEFGADD-----VSFEPIVASGPNG 215 (377)
T ss_dssp HHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTSCCTTCBHHHHHHHHHHHHHTSTTCCE-----ESSCCEEEEGGGG
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhhhccCCCccHHHHHHHHhhhhhhccCCCC-----cccCccccccccc
Confidence 456788999999999999999999999999999999999999999999999988776 5543 3589999999999
Q ss_pred ccccCCCCCcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHH
Q psy9913 90 VACHGIPDSRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENV 169 (309)
Q Consensus 90 ~~~h~~p~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~ 169 (309)
..+|+.|++++|++||+|++|+|+.|+||++|++|||++|+++++++++|++++++++++++.+|||+++++|+++++++
T Consensus 216 ~~~H~~~~~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~ 295 (377)
T 4fkc_A 216 ANPHHRPSHRKIRKGDVVIFDYGAKYLGYCSDVTRTVVVGPPSEEVKKVYEIVKEAQETAVQKVAEGIPAEVVDATARGI 295 (377)
T ss_dssp GCTTCCCCSCBCCTTCEEEEEECEEETTEECCEEEEEESSSCCTHHHHHHHHHHHHHHHHHHHCBTTCBHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCcccccceeEEEecCCHHHHHhhhhhHHHHHHHHHhhcCCcchhhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCcccccCCC
Q psy9913 170 AKQNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIFHTKND 249 (309)
Q Consensus 170 ~~~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~~~~~~ 249 (309)
+++.|+ +++|. |.+|||+|+++||.|.+.+ +
T Consensus 296 ~~~~g~-----------~~~~~-----------------------------------h~~GHgiGl~~hE~P~i~~---~ 326 (377)
T 4fkc_A 296 ISKYGY-----------GEYFI-----------------------------------HRTGHGLGIDVHEEPYISP---G 326 (377)
T ss_dssp HHHTTC-----------TTTCC-----------------------------------SCSEEECSSSSSEEEEECS---S
T ss_pred HHHhcc-----------cccCC-----------------------------------CCCeEeCCCccccCCcccC---C
Confidence 998865 34443 9999999999999998753 5
Q ss_pred CCCCccCCcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 250 YPGKMEPGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 250 ~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
.+.+|++||||++||++|.++ .+|+|+||+|+||++|+|+||.
T Consensus 327 ~~~~L~~Gmv~tiEPgiy~~g-----------------~~GvriEd~v~Vt~~g~e~Lt~ 369 (377)
T 4fkc_A 327 NKKILKDGMVFTIEPGIYLQG-----------------KFGVRIEDDVALVDKKGIRLTN 369 (377)
T ss_dssp CCCBCCTTCEEEECCEEEETT-----------------TEEEECBEEEEEETTEEEESCC
T ss_pred CCCEeCCCCEEEECCeeEECC-----------------ccEEEEccEEEEECCCcEECCC
Confidence 678999999999999999643 3478999999999999999984
No 17
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A
Probab=100.00 E-value=7.6e-50 Score=375.59 Aligned_cols=249 Identities=20% Similarity=0.289 Sum_probs=218.6
Q ss_pred CCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCC----CCCCCCceeEecCC
Q psy9913 13 KSPEVPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPL----NYKGYPKSICTSVN 88 (309)
Q Consensus 13 ~v~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~----~~~~~~~~v~~g~~ 88 (309)
-+..+|.+||++||+.||+|++++.++++.+.+.++||+||.||++.+++.+.++|+. .+. .+.+|+..+|+|.|
T Consensus 12 ~v~~~r~iKs~~EI~~mR~A~~i~~~~l~~~~~~ikpGvte~el~~~~~~~i~~~ga~-~~~~~~~~~~g~~f~~~vS~N 90 (401)
T 2q8k_A 12 DEQQEQTIAEDLVVTKYKMGGDIANRVLRSLVEASSSGVSVLSLCEKGDAMIMEETGK-IFKKEKEMKKGIAFPTSISVN 90 (401)
T ss_dssp --CCCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHCC-CCBHHHHHHHHHHHHHHHHHT-SSTTCTTCCEEEEEEEEEEET
T ss_pred cHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCh-hhcccccccCCCCCCcEEeCC
Confidence 3678999999999999999999999999999999999999999999999999987762 111 12345556788899
Q ss_pred CccccCCC--CC--cccCCCCeEEEeEEEEECCEEeeeEEEEEeC-----CCCHHHHHHHHHHHHHHHHHHHHhcCCCch
Q psy9913 89 NVACHGIP--DS--RPLEDGDIVNVDVTVYLNGYHGDCSATFCVG-----EVDASGKFLVNVAQQALHAAISVVKPGEYF 159 (309)
Q Consensus 89 ~~~~h~~p--~~--~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG-----~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~ 159 (309)
+..+||.| ++ ++|++||+|+||+|++|+||++|++|||++| +++++++++|++++++++++++++|||+++
T Consensus 91 ~~v~H~~P~~~d~~~~L~~GDiV~ID~G~~~~GY~sD~tRT~~vG~~~eg~~s~~~~~l~~~~~~a~~~~i~~~kPG~~~ 170 (401)
T 2q8k_A 91 NCVCHFSPLKSDQDYILKEGDLVKIDLGVHVDGFIANVAHTFVVDVAQGTQVTGRKADVIKAAHLCAEAALRLVKPGNQN 170 (401)
T ss_dssp TEEECCCCCTTSCCCBCCTTCEEEEEEEEEETTEEEEEEEEEETTCC-CCCBCHHHHHHHHHHHHHHHHHHHHCSTTCBH
T ss_pred cccccCCCCCCCCCcccCCCCEEEEEEEEEECCEEEEEEEEEEECCccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcH
Confidence 99999998 54 7999999999999999999999999999999 899999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccC
Q psy9913 160 STIGSIIENVAKQNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHG 239 (309)
Q Consensus 160 ~dv~~~~~~~~~~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e 239 (309)
+||+++++++++++||..++ +++|||||+++||
T Consensus 171 ~dI~~ai~~~~~~~G~~~v~-----------------------------------------------~~~GHGIG~~~HE 203 (401)
T 2q8k_A 171 TQVTEAWNKVAHSFNCTPIE-----------------------------------------------GMLSHQLKQHVID 203 (401)
T ss_dssp HHHHHHHHHHHHTTTCEECT-----------------------------------------------TCEEEEEBTTBSS
T ss_pred HHHHHHHHHHHHHcCCeecC-----------------------------------------------CcccccCCCcccc
Confidence 99999999999999987654 7899999999999
Q ss_pred CCc-cc-ccC-----CCCCCCccCCcEEEEccccccCCceeEEecCCceE------------------------------
Q psy9913 240 PPD-IF-HTK-----NDYPGKMEPGMTFTIEPVLTNGNGQVTMLEDGWTI------------------------------ 282 (309)
Q Consensus 240 ~p~-i~-~~~-----~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~------------------------------ 282 (309)
.|. +. ++. .+.+.+|++||||+|||+++.+.+.+...+++|.+
T Consensus 204 ~P~~i~~~~~~~~~~~~~~~~L~~GmV~tIEP~i~~G~g~v~~~~~~~t~y~~~~~~~~~lk~~~sr~~l~~i~~~~~~~ 283 (401)
T 2q8k_A 204 GEKTIIQNPTDQQKKDHEKAEFEVHEVYAVDVLVSSGEGKAKDAGQRTTIYKRDPSKQYGLKMKTSRAFFSEVERRFDAM 283 (401)
T ss_dssp CSCEEESSCCHHHHHHSCCCBCCTTCEEEEEEEEESSCCCCEECSCCCCEEEECTTCCCCCSSHHHHHHHHHHHHHHTTS
T ss_pred CCcccccCCCcccccCCCCCEeCCCCEEEEeCceEecCCEEEECCCCceEEeeccccccccccHHHHHHHHHHHHhCCCC
Confidence 995 32 221 12468999999999999999988888777777766
Q ss_pred --------------------------------EecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 283 --------------------------------VTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 283 --------------------------------~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
.++++++++|+|+||+||++|+++||.
T Consensus 284 pF~~r~l~~~~~~~~g~~e~~~~~~l~~~~vl~t~dg~~~Aq~EhTvlvt~~G~eilT~ 342 (401)
T 2q8k_A 284 PFTLRAFEDEKKARMGVVECAKHELLQPFNVLYEKEGEFVAQFKFTVLLMPNGPMRITS 342 (401)
T ss_dssp CEEGGGCC--HHHHHHHHHHHHTTSEEEECCEECCTTCCEEEEEEEEEEETTEEEECCC
T ss_pred ccchhhhCcchhHHHHHHHHHHcCCccCCCceEeeCCCEEEEEEEEEEECCCCcEEecC
Confidence 667899999999999999999999984
No 18
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis}
Probab=100.00 E-value=1.2e-50 Score=384.11 Aligned_cols=233 Identities=22% Similarity=0.294 Sum_probs=207.5
Q ss_pred CCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCc
Q psy9913 11 PGKSPEVPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNV 90 (309)
Q Consensus 11 ~~~v~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~ 90 (309)
+.++.++|++||++||+.||+|++++.+++.++++.++||+||.||++.++..+.++|+.. .+|++++++|.|..
T Consensus 162 ~~~i~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~tE~el~~~~~~~~~~~G~~~-----~~f~~ivasG~n~~ 236 (427)
T 3ig4_A 162 YPNICELRVFKTDEEIEIIKEAIAVTKDGIYNVLKHAKADMMEYELEAQFDFTLKSSGIKH-----HAFNTILASGKNAT 236 (427)
T ss_dssp HHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEHHHHHHHHHHHHHHTTCCE-----ESSCCEEEEGGGGG
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCC-----CCCCCEEEECcccc
Confidence 3567899999999999999999999999999999999999999999999999999999863 25999999999999
Q ss_pred cccCCCCCcccCCCCeEEEeEEEEECCEEeeeEEEEEe-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHH
Q psy9913 91 ACHGIPDSRPLEDGDIVNVDVTVYLNGYHGDCSATFCV-GEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENV 169 (309)
Q Consensus 91 ~~h~~p~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~v-G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~ 169 (309)
.+||.|++++|++||+|++|+|+.|+||++|+||||++ |+++++++++|++++++++++++++|||++++||+++++++
T Consensus 237 ~~H~~~~~~~l~~GdlvliD~G~~~~gY~sDitRT~~v~G~~s~~~~~~y~~vl~a~~~~i~~~kpG~~~~di~~~a~~~ 316 (427)
T 3ig4_A 237 VLHYEDNDAQIQNGDLVLLDLGAQKDYYNADISYTFPANGTFSSRQKQIYNIVLNALKETTEIIKPGLKFAALNEHAKKV 316 (427)
T ss_dssp STTCCCCCSEECTTCEEEEEECEEETTEECCEEEEEETTSCCCHHHHHHHHHHHHHHHHHHHTCCTTCBTHHHHHHHHHH
T ss_pred ccccCcccccCCCCCEEEEEeeeEECcEEEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred HHhC----CceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCcccc
Q psy9913 170 AKQN----KLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIFH 245 (309)
Q Consensus 170 ~~~~----g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~~ 245 (309)
+++. |+... ..++.+|| +|.+||++|+++||.|.
T Consensus 317 i~~~~~~~G~~~~----~~~~~~~~-----------------------------------~Hg~GH~iGl~vhe~~~--- 354 (427)
T 3ig4_A 317 LAEGCKAVGLIQE----DEELSKYY-----------------------------------YHGVSHFLGLDTHDVGT--- 354 (427)
T ss_dssp HHHHHHHHTSCSS----GGGGGGTC-----------------------------------CSCSCCBCSSSSSCCCC---
T ss_pred HHHhHhhcCCccC----cchhhccC-----------------------------------CCCCCCcCCcCCCcCCC---
Confidence 9875 32100 01233443 49999999999999764
Q ss_pred cCCCCCCCccCCcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 246 TKNDYPGKMEPGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 246 ~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
..+.+|++||||||||++|.++.+ +|+|+||+|+||++|+|+||.
T Consensus 355 ---~~~~~L~~GMV~tiEPgiy~~~~g----------------~GvriEd~vlVt~~G~e~LT~ 399 (427)
T 3ig4_A 355 ---YKDRVLEEGMVITIEPGLYIEEES----------------IGIRIEDDILVTKDGHENLSK 399 (427)
T ss_dssp ---CTTCBCCTTCEEEECCEEEEGGGT----------------EEEECBEEEEECSSSEEETTT
T ss_pred ---CCCCEeCCCCEEEECCEEEECCCc----------------eEEEEeeEEEEeCCcCeECCC
Confidence 346899999999999999965422 257899999999999999994
No 19
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ...
Probab=100.00 E-value=6.2e-50 Score=382.03 Aligned_cols=251 Identities=19% Similarity=0.255 Sum_probs=214.7
Q ss_pred cCCCCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEe
Q psy9913 6 FASGKPGKSPEVPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICT 85 (309)
Q Consensus 6 ~~~~~~~~v~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~ 85 (309)
+++. +.++..+|++||++||+.||+|++++.+++.++++.++||+||.||++.++..++++|+.. .+|++++++
T Consensus 162 ~~~~-~~~i~~~R~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~-----~~f~~iv~~ 235 (440)
T 2v3z_A 162 MIDW-RPVVHEMRLFKSPEEIAVLRRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHHEFNRHGARY-----PSYNTIVGS 235 (440)
T ss_dssp EECC-HHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCCE-----ESSCCEEEE
T ss_pred eeeH-HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCc-----CCCCCeEEE
Confidence 3443 3567889999999999999999999999999999999999999999999999999999864 259999999
Q ss_pred cCCCccccCCCCCcccCCCCeEEEeEEEEECCEEeeeEEEEEe-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHH
Q psy9913 86 SVNNVACHGIPDSRPLEDGDIVNVDVTVYLNGYHGDCSATFCV-GEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGS 164 (309)
Q Consensus 86 g~~~~~~h~~p~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~v-G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~ 164 (309)
|.|...+|+.|++++|++||+|++|+|+.|+||++|+||||++ |+++++++++|++++++++++++++|||++++||++
T Consensus 236 G~n~~~~H~~~~~~~l~~gd~vliD~G~~~~gy~sD~tRT~~v~G~~~~~~~~~y~~v~~a~~~~i~~~~pG~~~~~v~~ 315 (440)
T 2v3z_A 236 GENGCILHYTENECEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQREIYDIVLESLETSLRLYRPGTSILEVTG 315 (440)
T ss_dssp GGGGGSTTCCCCCSBCCTTCEEEEEECEEETTEECCEEEEEETTSCCCHHHHHHHHHHHHHHHHHHHHCCTTCCHHHHHH
T ss_pred cCccccccCCCCCccccCCCEEEEEeeEEECCEEEeeEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 9999999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHh----CCcee--c-ccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccc
Q psy9913 165 IIENVAKQ----NKLRV--V-PEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYF 237 (309)
Q Consensus 165 ~~~~~~~~----~g~~~--~-~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~ 237 (309)
++++++++ .|+.. . .-+..+++.+| ++|.+|||+|+++
T Consensus 316 ~~~~~~~~~l~~~G~~~g~~~~~~~~~~~~~~-----------------------------------~~Hg~GHgiGl~~ 360 (440)
T 2v3z_A 316 EVVRIMVSGLVKLGILKGDVDELIAQNAHRPF-----------------------------------FMHGLSHWLGLDV 360 (440)
T ss_dssp HHHHHHHHHHHHHTSSCSCHHHHHHTTTTTTT-----------------------------------CCSCSCCBCSSSS
T ss_pred HHHHHHHhhhhccCcccCchhhhhhhhccccc-----------------------------------cCCCCCCcCCccc
Confidence 99999875 33210 0 00001223333 3499999999999
Q ss_pred cCCCcccccCCCCCCCccCCcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecC
Q psy9913 238 HGPPDIFHTKNDYPGKMEPGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLT 308 (309)
Q Consensus 238 ~e~p~i~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT 308 (309)
||.|.+.+ ..+.+|++||||++||++|.+...- +.+.| +.+|+|+||+|+||++|+|+||
T Consensus 361 he~p~~~~---~~~~~L~~Gmv~tiEPgiy~~~~~~--~~~~~------~~~GvriEd~vlVt~~G~e~LT 420 (440)
T 2v3z_A 361 HDVGVYGQ---DRSRILEPGMVLTVAPGLYIAPDAE--VPEQY------RGIGIRIEDDIVITETGNENLT 420 (440)
T ss_dssp SCCSCCCG---GGCCCCCTTCEEEECCEEEECTTCS--SCGGG------TTEEEECBEEEEEETTEEEESS
T ss_pred ccCCCcCC---CCCCccCCCCEEEECCEEEeCCccc--ccccc------ceeEEEEeeEEEECCCcCeECC
Confidence 99998743 2468999999999999999765321 33444 2458999999999999999999
No 20
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii}
Probab=100.00 E-value=2.1e-50 Score=384.67 Aligned_cols=259 Identities=16% Similarity=0.168 Sum_probs=206.4
Q ss_pred CCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCcc
Q psy9913 12 GKSPEVPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVA 91 (309)
Q Consensus 12 ~~v~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~ 91 (309)
.++.++|++||++||+.||+|++++.++++++++.++||+||.||++.+...+ +.|... .+|++++++|.|...
T Consensus 151 ~~l~~lR~iKs~~EI~~mr~A~~ia~~a~~~~~~~i~pG~tE~el~~~~~~~~-~~g~~~-----~~f~~IVasG~naa~ 224 (451)
T 3rva_A 151 HYLHYQRAYKTDYELDCMREANKLAVAGHKAAEQAFREGKSEFDINLAYAAAS-RQGDND-----VPYTSIVALNEHASI 224 (451)
T ss_dssp HHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH-TCCTTT-----SSSCCEEEEGGGGGC
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHH-HcCCCc-----CCcCcEEEECCcccc
Confidence 56788999999999999999999999999999999999999999998776654 334432 369999999999999
Q ss_pred ccCCCCCcc-cCCCCeEEEeEEEEECCEEeeeEEEEEeCCC--CHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHH
Q psy9913 92 CHGIPDSRP-LEDGDIVNVDVTVYLNGYHGDCSATFCVGEV--DASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIEN 168 (309)
Q Consensus 92 ~h~~p~~~~-l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~--~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~ 168 (309)
+||.|++++ +++||+|+||+|+.|+||++|+||||++|++ +++++++|++++++++++++++|||++++||++++++
T Consensus 225 ~H~~~~~~~~l~~GdlVliD~G~~~~GY~sDiTRT~~vG~~~~~~~~~~ly~~vl~aq~aai~~ikPG~~~~di~~aa~~ 304 (451)
T 3rva_A 225 LHYMQCDTVAPKESRSFLIDAGANYHGYAADITRTYAQEGVHNSAMFRDLIQAVDKVTLTLVDSLKPGVAYTDIHLLAHD 304 (451)
T ss_dssp TTCCCCCSSCCSSCCEEEEEEEEEETTEEEEEEEEEECTTSTTHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHH
T ss_pred cCCCCCCCcccCCCCEEEEEeeEEECCEEEEeEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 999999875 6899999999999999999999999999987 7899999999999999999999999999999999988
Q ss_pred HHH----hCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCccc
Q psy9913 169 VAK----QNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIF 244 (309)
Q Consensus 169 ~~~----~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~ 244 (309)
++. +.|+.. |...+.+.......+++|.+|||+|+++||.|.+.
T Consensus 305 ~i~~~l~~~G~~~--------------------------------~~~~~~~~~g~~~~~f~H~~GHgiGldvHe~p~~~ 352 (451)
T 3rva_A 305 GIAQILHDTGMVN--------------------------------LTPPEIVEMGITRTFFPHGIGHFLGLQVHDVGGLV 352 (451)
T ss_dssp HHHHHHHHTTSBC--------------------------------SCHHHHHHTTTHHHHCCSCSCCBCSSSSSCTTTTB
T ss_pred HHHHHHHhcCCcc--------------------------------ccHHHHHhcCcccccCCCCCcccccCCcccCcccc
Confidence 775 444321 00000001111123556999999999999998764
Q ss_pred ccC-------------CCCCCCccCCcEEEEccccccCCceeEEec-------CCceEEec-CCCceeeeeEEEEEcCCC
Q psy9913 245 HTK-------------NDYPGKMEPGMTFTIEPVLTNGNGQVTMLE-------DGWTIVTE-DDSRTAQFEHTVLVTYDG 303 (309)
Q Consensus 245 ~~~-------------~~~~~~l~~gmv~~iep~~~~~~~~~~~~~-------~~~~~~~~-~~~~~~~~edtvlVt~~G 303 (309)
+.. .+.+.+|+|||||||||++|++...+..+. ..|...++ .+..|+|+||+|+||++|
T Consensus 353 ~~~~g~~~~~~~~~~~l~~~~~L~~GMV~TIEPGiY~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gGvRIED~vlVT~~G 432 (451)
T 3rva_A 353 NDDRGTPKPAPDDHPFLRCTRMVEARQVFTIEPGLYFIDSLLRDLKATPASKYINWDTIDAYKPFGGIRIEDNIIVHRDK 432 (451)
T ss_dssp SSTTCCBCCCCTTCTTCCCCCBCCTTCEEEECCEEECCHHHHHHHHTSGGGGGBCHHHHHHHGGGCEEECBEEEEECSSC
T ss_pred ccccccccccccccccCCCCCCcCCCCEEEECCEEeEchhhhhhhcccccccccccchhhhcCCCCEEEcccEEEECCCc
Confidence 321 134689999999999999998532110001 13333322 244589999999999999
Q ss_pred eeecC
Q psy9913 304 YKVLT 308 (309)
Q Consensus 304 ~e~LT 308 (309)
+|+||
T Consensus 433 ~e~LT 437 (451)
T 3rva_A 433 NENMT 437 (451)
T ss_dssp EEEHH
T ss_pred ceECC
Confidence 99998
No 21
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=100.00 E-value=4.1e-48 Score=350.59 Aligned_cols=228 Identities=29% Similarity=0.399 Sum_probs=206.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCccccCCCC---Ccc
Q psy9913 24 SQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVACHGIPD---SRP 100 (309)
Q Consensus 24 ~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~h~~p~---~~~ 100 (309)
+||+.||+|++++.++++.+++.++||+||.||++.+++.+.++|+.+ +||++ +|.|...+|+.|+ +++
T Consensus 1 eEI~~mr~A~~i~~~~l~~~~~~i~pG~te~el~~~~~~~~~~~G~~~------~fp~~--vs~n~~~~H~~p~~~~~~~ 72 (295)
T 1xgs_A 1 MDTEKLMKAGEIAKKVREKAIKLARPGMLLLELAESIEKMIMELGGKP------AFPVN--LSINEIAAHYTPYKGDTTV 72 (295)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCEE------SSCCE--EEETTEEECCCCCTTCCCB
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHcCCCC------CCCcE--EeeCCccccccCCCCCCcc
Confidence 489999999999999999999999999999999999999999999986 48864 4678889999996 789
Q ss_pred cCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhCCceeccc
Q psy9913 101 LEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQNKLRVVPE 180 (309)
Q Consensus 101 l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~g~~~~~~ 180 (309)
|++||+|++|+|+.|+||++|++|||++|+ +++++|++++++++++++++|||++++||+++++++++++|+..++
T Consensus 73 L~~GDiv~iD~G~~~~GY~sD~tRT~~vG~---~~~~l~~~~~~a~~~~i~~~kpG~~~~dI~~a~~~~~~~~G~~~~~- 148 (295)
T 1xgs_A 73 LKEGDYLKIDVGVHIDGFIADTAVTVRVGM---EEDELMEAAKEALNAAISVARAGVEIKELGKAIENEIRKRGFKPIV- 148 (295)
T ss_dssp CCTTCEEEEEEEEEETTEEEEEEEEEETTS---CCCHHHHHHHHHHHHHHHHCSTTCBTHHHHHHHHHHHHTTTCEECT-
T ss_pred ccCCCEEEEEEeEEECCEEEEEEEEEEeCH---HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHCCCeEEC-
Confidence 999999999999999999999999999997 7889999999999999999999999999999999999999886433
Q ss_pred ccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeecccccccc-ccccCCCcccccCCCC-CCCccCCc
Q psy9913 181 ILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIG-SYFHGPPDIFHTKNDY-PGKMEPGM 258 (309)
Q Consensus 181 ~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG-~~~~e~p~i~~~~~~~-~~~l~~gm 258 (309)
|++|||+| +.+||.|.++++.... +.+|++||
T Consensus 149 ----------------------------------------------~~~GHgIG~l~~He~p~ip~~~~~~~~~~L~~Gm 182 (295)
T 1xgs_A 149 ----------------------------------------------NLSGHKIERYKLHAGISIPNIYRPHDNYVLKEGD 182 (295)
T ss_dssp ----------------------------------------------TCCEEECBTTBSSCSCEECSSCCTTCCCBCCTTC
T ss_pred ----------------------------------------------CCcCCCCCCcccCCCCcCCccCCCCCCCEeCCCC
Confidence 89999998 6999999987765555 78999999
Q ss_pred EEEEccccccCCceeEE--------------e---------------------cCCceE---------------------
Q psy9913 259 TFTIEPVLTNGNGQVTM--------------L---------------------EDGWTI--------------------- 282 (309)
Q Consensus 259 v~~iep~~~~~~~~~~~--------------~---------------------~~~~~~--------------------- 282 (309)
||+|||+++.+.+.++. + .++|..
T Consensus 183 V~tIEP~i~~G~g~v~~~~~~~iy~~~~~~~l~~~~~~~~~~~i~~~~~~lpf~~~w~~~~~~~~~~~~~l~~~~~~~~~ 262 (295)
T 1xgs_A 183 VFAIEPFATIGAGQVIEVPPTLIYMYVRDVPVRVAQARFLLAKIKREYGTLPFAYRWLQNDMPEGQLKLALKTLEKAGAI 262 (295)
T ss_dssp EEEECCEEESSCSCEEEEEEEEEEEECCCCCCSSHHHHHHHHHHHHHTTTSCEESGGGTTTSCHHHHHHHHHHHHHHTSE
T ss_pred EEEEcceeECCCCEEEECCceEEEEecCCcccccHHHHHHHHHHHHhCCCCCcchhhhhcccchhHHHHHHHHHHHCCCc
Confidence 99999999977777653 1 278865
Q ss_pred ------EecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 283 ------VTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 283 ------~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
.++|+++++|+|+||+||++|+++||.
T Consensus 263 ~~y~vl~~~~g~~~aq~ehTv~vt~~g~~ilt~ 295 (295)
T 1xgs_A 263 YGYPVLKEIRNGIVAQFEHTIIVEKDSVIVTTE 295 (295)
T ss_dssp EEEEEEEETTCCCEEECBEEEEECSSSEEETTC
T ss_pred ccCCceEecCCCeEeEEEEEEEECCCCcEEecC
Confidence 889999999999999999999999994
No 22
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A*
Probab=100.00 E-value=3.3e-48 Score=373.09 Aligned_cols=258 Identities=20% Similarity=0.156 Sum_probs=204.4
Q ss_pred CCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCcc
Q psy9913 12 GKSPEVPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVA 91 (309)
Q Consensus 12 ~~v~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~ 91 (309)
.++.++|++||++||+.||+|++++.++++++++.++||+||.||++.+...+ +.|... .+|++++++|.|...
T Consensus 151 ~~l~~lR~iKs~~EIe~mR~A~~ia~~a~~~~~~~ikpG~tE~el~~~~~~~~-~~g~~~-----~sf~~IVasG~naa~ 224 (517)
T 3l24_A 151 NFYHYHRAYKTQYELACMREANKIAVQGHKAARDAFFQGKSEFEIQQAYLLAT-QHSEND-----NPYGNIVALNENCAI 224 (517)
T ss_dssp HHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH-TCCGGG-----SSSCCEEEEGGGGGC
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHH-HcCCCc-----CCcCCEEEEcccccc
Confidence 56788999999999999999999999999999999999999999998776654 334332 369999999999999
Q ss_pred ccCCCCCcc-cCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHH
Q psy9913 92 CHGIPDSRP-LEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVA 170 (309)
Q Consensus 92 ~h~~p~~~~-l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~ 170 (309)
+||.|++++ +++||+|++|+|+.|+||++|+||||++|+ +++++++|++++++++++++++|||++++||++++++++
T Consensus 225 ~H~~p~~~~~l~~GDlVliD~G~~~~GY~sDiTRT~~vG~-~~e~~~ly~~vl~Aq~aai~~ikPGv~~~dI~~aa~~~i 303 (517)
T 3l24_A 225 LHYTHFDRVAPATHRSFLIDAGANFNGYAADITRTYDFTG-EGEFAELVATMKQHQIALMNQLAPGKLYGELHLDCHQRV 303 (517)
T ss_dssp TTCCCCCSSCCSSCCEEEEEEEEEETTEEEEEEEEEESSS-CSHHHHHHHHHHHHHHHHHTTCCTTCBHHHHHHHHHHHH
T ss_pred ccCCCCCCccccCCCEEEEeecEEECCEEEEeEEEEEcCC-CHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH
Confidence 999999885 799999999999999999999999999997 478999999999999999999999999999999999877
Q ss_pred H----hCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCccccc
Q psy9913 171 K----QNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDIFHT 246 (309)
Q Consensus 171 ~----~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~~~ 246 (309)
. +.|+.. |...+.........+++|.+|||+|+++||.|.+.+.
T Consensus 304 ~~~L~~~G~~~--------------------------------~~~~~~~~~g~~~~~f~HglGHgiGLdvHE~p~~~~~ 351 (517)
T 3l24_A 304 AQTLSDFNIVD--------------------------------LSADEIVAKGITSTFFPHGLGHHIGLQVHDVGGFMAD 351 (517)
T ss_dssp HHHHHHTTSBS--------------------------------SCHHHHHHTTCGGGTCCSCSCCBCSSSSSCCCCTTC-
T ss_pred HHHHHhcCCcc--------------------------------ccHHHHHhcCcccccCCCCCCCCCCcccccCcccccc
Confidence 5 444421 0000000111112345699999999999999977542
Q ss_pred C-------------CCCCCCccCCcEEEEccccccCCceeEEec-------CCceEEec-CCCceeeeeEEEEEcCCCee
Q psy9913 247 K-------------NDYPGKMEPGMTFTIEPVLTNGNGQVTMLE-------DGWTIVTE-DDSRTAQFEHTVLVTYDGYK 305 (309)
Q Consensus 247 ~-------------~~~~~~l~~gmv~~iep~~~~~~~~~~~~~-------~~~~~~~~-~~~~~~~~edtvlVt~~G~e 305 (309)
. .+.+++|++||||||||++|++...+..+. ..|...+. .+.+|+|+||+|+||++|+|
T Consensus 352 ~~g~~~~~~~~~p~l~~~~~Le~GMV~TIEPGiY~~~~~l~~~~~~~~~~~~~~~~~~~~~g~GGVRIED~VlVT~~G~e 431 (517)
T 3l24_A 352 EQGAHQEPPEGHPFLRCTRKIEANQVFTIEPGLYFIDSLLGDLAATDNNQHINWDKVAELKPFGGIRIEDNIIVHEDSLE 431 (517)
T ss_dssp --------------CCTTCBCCTTEEEEECCEEECCHHHHHHHHTSGGGGGBCHHHHHHHGGGCEEECBEEEEECSSCEE
T ss_pred ccccccccccccccCCCCccccCCcEEEECCEEeechhhhhhhcccccccccccchhhhcCCCCEEEEeeEEEECCCcCe
Confidence 1 135689999999999999998532100000 12322222 24458999999999999999
Q ss_pred ecC
Q psy9913 306 VLT 308 (309)
Q Consensus 306 ~LT 308 (309)
+||
T Consensus 432 ~LT 434 (517)
T 3l24_A 432 NMT 434 (517)
T ss_dssp EHH
T ss_pred eCC
Confidence 998
No 23
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1
Probab=100.00 E-value=3.3e-48 Score=366.41 Aligned_cols=245 Identities=16% Similarity=0.218 Sum_probs=209.4
Q ss_pred ccCCCCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCC-CCCCCcee
Q psy9913 5 EFASGKPGKSPEVPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLN-YKGYPKSI 83 (309)
Q Consensus 5 ~~~~~~~~~v~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~-~~~~~~~v 83 (309)
++++. +++++.+|++||++||+.||+|++++.++++++++.++||+||.||++.+++.+.++|+...+.. +..+++++
T Consensus 143 ~~v~~-~~~i~~lR~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~iv 221 (402)
T 1kp0_A 143 EFVDV-GZPVMWZRVIKSSEEZBLIRZGARISDIGGAATAAAISAGVPEYEVAIATTBAMVRZIARBFPYVELMDTWIWF 221 (402)
T ss_dssp EEEEC-HHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHHHHHSSSCEEEEEEEEE
T ss_pred EEEEC-HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHhcccccCcccccCcccee
Confidence 34444 36788899999999999999999999999999999999999999999999999988776432110 11233468
Q ss_pred EecCCCccccCCCCCcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHH
Q psy9913 84 CTSVNNVACHGIPDSRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIG 163 (309)
Q Consensus 84 ~~g~~~~~~h~~p~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~ 163 (309)
++|.|...+|+.|++++|++||+|++|+|++|+||++|++|||++|+++++++++|++++++++++++++|||++++||+
T Consensus 222 ~~g~n~~~~H~~~~~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~ 301 (402)
T 1kp0_A 222 QSGINTDGAHNPVTBRVVZRGDILSLNCFPMIFGYYTALERTLFLZZVBDASLZIWZKNTAVHRRGLZLIKPGARCKDIA 301 (402)
T ss_dssp EEGGGGGSTTCCEECCBCCTTCEEEEEEEEEETTEECCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHH
T ss_pred ecccccccccCCCCCcccCCCCEEEEEEEeeECCEeeecEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCcc
Q psy9913 164 SIIENVAKQNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPDI 243 (309)
Q Consensus 164 ~~~~~~~~~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i 243 (309)
+++++++++.|+. .+|. |.+|||+|+.+||.|..
T Consensus 302 ~~~~~~~~~~G~~-----------~~~~-----------------------------------~~~GHgiG~~~He~~~~ 335 (402)
T 1kp0_A 302 SELNBMYRZWDLL-----------RYRT-----------------------------------FGYGHSFGVLBHYYGRE 335 (402)
T ss_dssp HHHHHHHHHTTCG-----------GGBC-----------------------------------SCSCBBCEEEETTEECC
T ss_pred HHHHHHHHHcCCC-----------eecC-----------------------------------CCcccccCCccccCCcc
Confidence 9999999998753 3332 88999999999998753
Q ss_pred cc--cCCCCCCCccCCcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 244 FH--TKNDYPGKMEPGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 244 ~~--~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
.. ...+.+.+|++||||++||++|.+... .+.+|+|+||+|+||++|+|+||.
T Consensus 336 ~g~~~~~~~~~~l~~Gmv~tiEPgiy~~~~~-------------~~~~G~ried~v~Vt~~g~e~Lt~ 390 (402)
T 1kp0_A 336 AGVELREDIZTVLEPGMVVSMEPMVMBPEGE-------------PGAGGYREHDILVIKENBTENITG 390 (402)
T ss_dssp TTCBCCTTCCCBCCTTCEEEECCEEEECTTS-------------TTCEEEECBEEEEEETTEEEECCC
T ss_pred cCcccCCCCCCccCCCcEEEECCceeecCcc-------------CCCCcEEEEEEEEEcCCcceECCC
Confidence 21 123567899999999999999975321 133478999999999999999984
No 24
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1
Probab=100.00 E-value=3.4e-47 Score=359.32 Aligned_cols=244 Identities=16% Similarity=0.223 Sum_probs=207.2
Q ss_pred ccCCCCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCc--e
Q psy9913 5 EFASGKPGKSPEVPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPK--S 82 (309)
Q Consensus 5 ~~~~~~~~~v~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~--~ 82 (309)
++++. +.++..+|++||++||+.||+|+++++.++..+.+.++||+||.||++.+++.+.+.|....+. ...|++ +
T Consensus 143 ~~~~~-~~~i~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~tE~el~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 220 (401)
T 1chm_A 143 ELVDV-AAACMRMRMIKSAEEHVMIRHGARIADIGGAAVVEALGDQVPEYEVALHATQAMVRAIADTFED-VELMDTWTW 220 (401)
T ss_dssp EEEEC-HHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHHHHHCSS-CCBCCCEEE
T ss_pred EEEEh-HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHhccccCCC-ccccCccee
Confidence 34443 4567889999999999999999999999999999999999999999999998888765532211 112555 3
Q ss_pred eEecCCCccccCCCCCcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHH
Q psy9913 83 ICTSVNNVACHGIPDSRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTI 162 (309)
Q Consensus 83 v~~g~~~~~~h~~p~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv 162 (309)
+++|.|...+|+.|++++|++||+|++|+|+.|+||++|+||||++|+++++++++|++++++++++++++|||++++||
T Consensus 221 ~~~g~n~~~~H~~~~~~~l~~gd~v~iD~G~~~~gY~sD~tRT~~~G~~~~~~~~~y~~v~~a~~~~i~~~~pG~~~~~v 300 (401)
T 1chm_A 221 FQSGINTDGAHNPVTTRKVNKGDILSLNCFPMIAGYYTALERTLFLDHCSDDHLRLWQVNVEVHEAGLKLIKPGARCSDI 300 (401)
T ss_dssp EEEGGGGGSTTCCEESCBCCTTCEEEEEEECEETTEECCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHH
T ss_pred eeecccccccccCCCCCccCCCCEEEEEEEEeeCCEeecceEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHH
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCCCc
Q psy9913 163 GSIIENVAKQNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGPPD 242 (309)
Q Consensus 163 ~~~~~~~~~~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~p~ 242 (309)
++++++++++.|+. +++. |.+|||+|+.+|+.|.
T Consensus 301 ~~~~~~~~~~~G~~-----------~~~~-----------------------------------~~~GHgiG~~~h~~~~ 334 (401)
T 1chm_A 301 ARELNEIFLKHDVL-----------QYRT-----------------------------------FGYGHSFGTLSHYYGR 334 (401)
T ss_dssp HHHHHHHHHHHTCG-----------GGBC-----------------------------------SCSCBBCSBEETTEEC
T ss_pred HHHHHHHHHHcCCC-----------cccC-----------------------------------CCCCcccCccCCcccc
Confidence 99999999988653 3332 7899999999998764
Q ss_pred ccc--cCCCCCCCccCCcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 243 IFH--TKNDYPGKMEPGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 243 i~~--~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
... ...+.+.+|++||||++||++|.+... .+.+|+|+||+|+||++|+|+||.
T Consensus 335 ~~g~~~~~~~~~~L~~Gmv~tiEPgiy~~~~~-------------~g~~GvriEd~vlVt~~G~e~LT~ 390 (401)
T 1chm_A 335 EAGLELREDIDTVLEPGMVVSMEPMIMLPEGL-------------PGAGGYREHDILIVNENGAENITK 390 (401)
T ss_dssp CTTSBCCTTCCCBCCTTCEEEECCEEEECTTS-------------TTCEEEECBEEEEEETTEEEECCC
T ss_pred ccCccccCCCCCccCCCCEEEEcCeeeecccc-------------CCCCeEEEeeeEEECCCcceECCC
Confidence 211 223467899999999999999965311 133578999999999999999984
No 25
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A
Probab=100.00 E-value=8.7e-47 Score=364.72 Aligned_cols=254 Identities=20% Similarity=0.278 Sum_probs=205.8
Q ss_pred CCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHC-CCccCCCCCCCCCceeEecCCCcc
Q psy9913 13 KSPEVPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINN-GAYPSPLNYKGYPKSICTSVNNVA 91 (309)
Q Consensus 13 ~v~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~-G~~~~~~~~~~~~~~v~~g~~~~~ 91 (309)
++..+|++||++||+.||+|++++.+++.++++.++||+||.||++.+...+.++ |+.. .+|++++++|.|...
T Consensus 180 ~l~~~R~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~~G~tE~el~~~~~~~~~~~~G~~~-----~~~~~iv~sG~n~~~ 254 (494)
T 2iw2_A 180 EIVECRVFKTDMELEVLRYTNKISSEAHREVMKAVKVGMKEYELESLFEHYCYSRGGMRH-----SSYTCICGSGENSAV 254 (494)
T ss_dssp HHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHHCCCE-----ESSCCEEEEGGGGGC
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHhCCCCc-----CCCCceEEEcCcccc
Confidence 5678899999999999999999999999999999999999999999999988776 7753 258999999999999
Q ss_pred ccCC----CCCcccCCCCeEEEeEEEEECCEEeeeEEEEEe-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHH
Q psy9913 92 CHGI----PDSRPLEDGDIVNVDVTVYLNGYHGDCSATFCV-GEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSII 166 (309)
Q Consensus 92 ~h~~----p~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~v-G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~ 166 (309)
+||. |++++|++||+|++|+|+.|+||++|++|||++ |+++++|+++|++++++++++++++|||++++||++++
T Consensus 255 ~Hy~~~g~p~~~~l~~Gd~vliD~G~~~~gY~sDitRT~~v~G~~s~~q~~~y~~v~~a~~~~i~~~kpG~~~~di~~~a 334 (494)
T 2iw2_A 255 LHYGHAGAPNDRTIQNGDMCLFDMGGEYYCFASDITCSFPANGKFTADQKAVYEAVLRSSRAVMGAMKPGVWWPDMHRLA 334 (494)
T ss_dssp SSCSSTTSCSCCBCCTTCEEEEEECEEBTTBCCCEEEEEETTSCCCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHH
T ss_pred ccccccCCCCCCccCCCCEEEEEeeEEECCEEEEeeEEEEECCcCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHH
Confidence 9974 559999999999999999999999999999999 89999999999999999999999999999999999999
Q ss_pred HHHHHh----CCcee--cccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccccccCC
Q psy9913 167 ENVAKQ----NKLRV--VPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGSYFHGP 240 (309)
Q Consensus 167 ~~~~~~----~g~~~--~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~~~~e~ 240 (309)
++++.+ .|+.. +..+..+|+. ..+++|.+|||+|+++||.
T Consensus 335 ~~~i~~~l~~~G~~~g~~~~~~~~g~~----------------------------------~~~~~H~~GHgiGl~vHd~ 380 (494)
T 2iw2_A 335 DRIHLEELAHMGILSGSVDAMVQAHLG----------------------------------AVFMPHGLGHFLGIDVHDV 380 (494)
T ss_dssp HHHHHHHHHHTTSBCSCHHHHHHTTTH----------------------------------HHHCCSCSCCBCSSSSSCS
T ss_pred HHHHHHHHHHcCCccccHHHHHhcccc----------------------------------cccCCCCCcCCCCcccccC
Confidence 998754 44421 1111112222 1245699999999999985
Q ss_pred Ccc---------cccC-CCCCCCccCCcEEEEccccccCCceeEEecCCce-----E-------E-ecCCCceeeeeEEE
Q psy9913 241 PDI---------FHTK-NDYPGKMEPGMTFTIEPVLTNGNGQVTMLEDGWT-----I-------V-TEDDSRTAQFEHTV 297 (309)
Q Consensus 241 p~i---------~~~~-~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~-----~-------~-~~~~~~~~~~edtv 297 (309)
+.. +.+. .+.+.+|++||||+|||++|.... +.++|. . . ...+.+|+|+||+|
T Consensus 381 ~~~~~~~~~~~~p~~~~~~~~~~L~~GMV~tiEPGiy~~~~----~~~~~~~d~~~~~~~~~~~~~~~~g~gGvRiED~v 456 (494)
T 2iw2_A 381 GGYPEGVERIDEPGLRSLRTARHLQPGMVLTVEPGIYFIDH----LLDEALADPARASFFNREVLQRFRGFGGVRIEEDV 456 (494)
T ss_dssp CSSCTTCCCCCSTTGGGCSCCCBCCTTCEEEECCEEECCHH----HHHHHHHCHHHHTTBCHHHHHHHTTCCEEECBEEE
T ss_pred CCcccccccccccccccCCCCCEeCCCCEEEECCccccccc----cchhhccccccccccccchhhhhCCCCEEEeeeEE
Confidence 321 1111 135689999999999999997421 011121 0 0 01245689999999
Q ss_pred EEcCCCeeecCC
Q psy9913 298 LVTYDGYKVLTY 309 (309)
Q Consensus 298 lVt~~G~e~LT~ 309 (309)
+||++|+|+||.
T Consensus 457 lVte~G~e~LT~ 468 (494)
T 2iw2_A 457 VVTDSGIELLTC 468 (494)
T ss_dssp EECSSSEEECCC
T ss_pred EEcCCcCeECCC
Confidence 999999999984
No 26
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A*
Probab=100.00 E-value=2.6e-47 Score=366.86 Aligned_cols=243 Identities=14% Similarity=0.071 Sum_probs=210.6
Q ss_pred ccCCCCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHhccC------CCCHHHHHHHHHHHHHH-----CC-----
Q psy9913 5 EFASGKPGKSPEVPEVKTESQIRLMHESCKLARFVLDCIAEHIKV------NMTTNELDVFAHELIIN-----NG----- 68 (309)
Q Consensus 5 ~~~~~~~~~v~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~p------G~te~el~~~~~~~~~~-----~G----- 68 (309)
++++. ++++..+|++||++||+.||+|++++.+++..+++.++| |+||.||++.++..+.+ +|
T Consensus 163 ~lv~~-~~~i~~lr~iK~~~Ei~~~r~A~~i~~~a~~~~~~~i~~~i~~g~g~te~el~~~~~~~~~~~~~~~~G~~~~~ 241 (467)
T 3biq_A 163 NVIDI-SLGLSKVWEVKDVNEQAFLSVSSKGSDKFMDLLSNEMVRAVDEELKITNAKLSDKIENKIDDVKFLKQLSPDLS 241 (467)
T ss_dssp EEEEC-HHHHHHHTCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBHHHHHHHHHHGGGCHHHHHHHHHHHH
T ss_pred eeech-HHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCccHHHHHHHHHHHHHhhhhhhcCCcccc
Confidence 44444 467889999999999999999999999999999999998 99999999999998877 55
Q ss_pred --------CccCCCCCCCCCceeEecCCCc-cccCCCCCcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHH
Q psy9913 69 --------AYPSPLNYKGYPKSICTSVNNV-ACHGIPDSRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLV 139 (309)
Q Consensus 69 --------~~~~~~~~~~~~~~v~~g~~~~-~~h~~p~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~ 139 (309)
+.+.. ...+|++++++|.|.. .+|+.|++++|++||+|++|+|++|+||++|++|||++| ++++++++|
T Consensus 242 ~~~~~~~~~~~~~-~~~~f~~iv~~G~n~~~~~H~~~~~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~g-~~~~~~~~~ 319 (467)
T 3biq_A 242 ALCPPNYKFNFDL-LDWTYSPIIQSGKKFDLRVSARSTNDQLYGNGCILASCGIRYNNYCSNITRTFLID-PSEEMANNY 319 (467)
T ss_dssp TTSCTTCCCCGGG-EEESSCCEEECTTCCCCSTTCCCCSSBCCCSEEEEEEECEEETTEECCEEEEEEES-CCHHHHHHH
T ss_pred ccccccccCCccc-ccCCCCCeEEecCCcceeeccCCCCCccCCCCEEEEEEeEEECCEEeeeeEEEEeC-CCHHHHHHH
Confidence 32110 1236999999999998 999999999999999999999999999999999999999 899999999
Q ss_pred HHHHHHHHHHHHH-hcCCCchhHHHHHHHHHHHhCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhh
Q psy9913 140 NVAQQALHAAISV-VKPGEYFSTIGSIIENVAKQNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAK 218 (309)
Q Consensus 140 ~~~~~a~~~~~~~-lkpG~~~~dv~~~~~~~~~~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 218 (309)
+++++++++++++ +|||++++||++++++++++.|+ |+.++|.
T Consensus 320 ~~v~~a~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~---------g~~~~~~--------------------------- 363 (467)
T 3biq_A 320 DFLLTLQKEIVTNILKPGRTPKEVYESVIEYIEKTKP---------ELVPNFT--------------------------- 363 (467)
T ss_dssp HHHHHHHHHHHHHTCCTTCCHHHHHHHHHHHHHHHCG---------GGGGGBC---------------------------
T ss_pred HHHHHHHHHHHHhCCcCCCcHHHHHHHHHHHHHHhCc---------chhhcCC---------------------------
Confidence 9999999999999 99999999999999999999853 3445554
Q ss_pred ccccceeeccccccccccccCCCcccccCCCC-CCCccCCcEEEEccccc-cCCceeEEecCCceEEecCCCceeeeeEE
Q psy9913 219 HNKLRVVPEILGHGIGSYFHGPPDIFHTKNDY-PGKMEPGMTFTIEPVLT-NGNGQVTMLEDGWTIVTEDDSRTAQFEHT 296 (309)
Q Consensus 219 ~~~~~~~~~~~GHgiG~~~~e~p~i~~~~~~~-~~~l~~gmv~~iep~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~edt 296 (309)
|.+|||||+++||.|.+.. .+. +.+|++||||++||++| .. +++ .++.+|+|+|||
T Consensus 364 --------h~~GHgiGl~~hE~p~~~~--~~~~~~~l~~Gmv~tiEPgiy~~~------~~~------~~g~~gvriEd~ 421 (467)
T 3biq_A 364 --------KNIGSLIGLEFRDSNFILN--VKNDYRKIQRGDCFNISFGFNNLK------DSQ------SANNYALQLADT 421 (467)
T ss_dssp --------SCCEEECSSSSCCGGGBSS--TTCCSCCCCTTCEEEEEEEEEEEC------CSS------CSSCEEEEEEEE
T ss_pred --------CCcccccccccccCCccCC--CCCCCCccCCCCEEEEeCeEEeee------cCC------CCCccEEEEEEE
Confidence 9999999999999996432 245 78999999999999998 31 011 234568999999
Q ss_pred EEEc--CCCeeecC
Q psy9913 297 VLVT--YDGYKVLT 308 (309)
Q Consensus 297 vlVt--~~G~e~LT 308 (309)
|+|| ++|+|+||
T Consensus 422 v~Vt~~~~G~e~Lt 435 (467)
T 3biq_A 422 VQIPLDETEPPRFL 435 (467)
T ss_dssp EECCSSTTSCCEES
T ss_pred EEEecCCCCcEEec
Confidence 9999 99999998
No 27
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114}
Probab=100.00 E-value=7.2e-48 Score=368.93 Aligned_cols=234 Identities=18% Similarity=0.279 Sum_probs=206.0
Q ss_pred cccCCCCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCC-----CHHHHHHHHHHHHHHCCCccCCCCCCC
Q psy9913 4 CEFASGKPGKSPEVPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNM-----TTNELDVFAHELIINNGAYPSPLNYKG 78 (309)
Q Consensus 4 ~~~~~~~~~~v~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~-----te~el~~~~~~~~~~~G~~~~~~~~~~ 78 (309)
+++++. +.++..+|++||++||+.||+|++++.++++++++.++||+ ||.||++.++..++++|++.+
T Consensus 214 ~~~vd~-~~~v~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~~~~~~tE~el~~~l~~~~~~~G~~~~------ 286 (470)
T 4b28_A 214 FEIMDG-EEVTEKARSVKGPDEIRAMRCASHACEVAVRKMEDFARSKVGDGVTCENDIWAILHSENVRRGGEWI------ 286 (470)
T ss_dssp CEEEEH-HHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCBHHHHHHHHHHHHHTTTCCEE------
T ss_pred CEEEEc-HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCcC------
Confidence 344444 46688999999999999999999999999999999999999 999999999999999998753
Q ss_pred CCceeEecCCCccccCCCCCcccCCCCeEEEeEEEE-ECCEEeeeEEEEEeC--CCCHHHHHHHHHHHHHHHHHHHHhcC
Q psy9913 79 YPKSICTSVNNVACHGIPDSRPLEDGDIVNVDVTVY-LNGYHGDCSATFCVG--EVDASGKFLVNVAQQALHAAISVVKP 155 (309)
Q Consensus 79 ~~~~v~~g~~~~~~h~~p~~~~l~~gd~v~iD~g~~-~~Gy~~d~~Rt~~vG--~~~~~~~~~~~~~~~a~~~~~~~lkp 155 (309)
|++++++|.|...+|+.|++++|++||+|++|+|+. +.||++|++|||++| +++++++++|++++++++++++++||
T Consensus 287 ~~~ivasG~n~~~~H~~~~~~~l~~Gd~vliD~G~~g~~GY~sDitRT~~vG~~~~s~~~~~~y~~v~~a~~a~i~~ikp 366 (470)
T 4b28_A 287 ETRLLASGPRSNPWFQECGPRVCQRNEIISFDTDLVGAYGICTDISRSWWIGDQKPRADMIYAMQHGVEHIRTNMEMLKP 366 (470)
T ss_dssp SCCCEEEGGGGSSTTCCCCSCBCCSSEEEEEECCEECGGGCEECCEEEEEESSSCCCHHHHHHHHHHHHHHHHHHHTCCT
T ss_pred CCceeEEcCccccCCCCCCCccccCCCEEEEEecccccCeEEEeeEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHccC
Confidence 667888999999999999999999999999999998 999999999999999 69999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHhCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccc
Q psy9913 156 GEYFSTIGSIIENVAKQNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGS 235 (309)
Q Consensus 156 G~~~~dv~~~~~~~~~~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~ 235 (309)
|++++||++++++++++++.. + + |.+|||+|+
T Consensus 367 G~~~~di~~~ar~~i~~~~~~--------~---------------------------------------~-~~~GHGIGl 398 (470)
T 4b28_A 367 GVMIPELSANTHVLDAKFQKQ--------K---------------------------------------Y-GCLMHGVGL 398 (470)
T ss_dssp TCBHHHHHHTCCCCCHHHHTT--------C---------------------------------------C-SCSEEEESS
T ss_pred CCCHHHHHHHHHHHHHHhhhc--------C---------------------------------------C-CCccCCCCc
Confidence 999999999998877653210 0 0 789999999
Q ss_pred cccCCCcccccC----CCCCCCccCCcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 236 YFHGPPDIFHTK----NDYPGKMEPGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 236 ~~~e~p~i~~~~----~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
+||.|.+.+.. .+.+.+|++||||++||++|.. ++.+|+|+||+|+||++|+|+||.
T Consensus 399 -~HE~P~i~~~~~~~~~~~~~~L~~GMV~tiEPgiy~~----------------~g~~GvriEd~vlVte~G~e~LT~ 459 (470)
T 4b28_A 399 -CDEWPLVAYPDHAVAGAYDYPLEPGMTLCVEALISEE----------------GGDFSIKLEDQVLITEDGYENLTK 459 (470)
T ss_dssp -SEEEEEECCTTTCCTTSSCCBCCTTCEEEEEEEEECT----------------TCSCEEEEEEEEEECSSSEEECCC
T ss_pred -CCCCCcccCccccccCCCCCEECCCCEEEEcCeeecC----------------CCcEEEEEeeEEEEeCCcCeECCC
Confidence 69999886531 3457899999999999999851 234578999999999999999984
No 28
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A
Probab=100.00 E-value=6.4e-47 Score=361.99 Aligned_cols=248 Identities=16% Similarity=0.168 Sum_probs=207.0
Q ss_pred ccCCCCCCCCCCccccCCHHHHHHHHHHHHHHHHHHH-HHH----HhccCC--CCHHHHHHHHHHHHHH--------CCC
Q psy9913 5 EFASGKPGKSPEVPEVKTESQIRLMHESCKLARFVLD-CIA----EHIKVN--MTTNELDVFAHELIIN--------NGA 69 (309)
Q Consensus 5 ~~~~~~~~~v~~~R~iKs~~Ei~~~r~A~~i~~~~~~-~~~----~~i~pG--~te~el~~~~~~~~~~--------~G~ 69 (309)
++++. +.++..+|++||++||+.||+|++++.+++. .+. +.++|| +||.||++.++..+++ .|+
T Consensus 163 ~~~~~-~~~i~~~r~iK~~~Ei~~~r~A~~i~~~a~~~~~~~~~~~~i~~G~~~te~el~~~~~~~~~~~~~~~g~~~ga 241 (444)
T 3cb6_A 163 NLVDA-SLGLAKCLAIKDEQELANIKGASRVSVAVMSKYFVDELSTYIDQGKKITHSKFSDQMESLIDNEAFFQTKSLKL 241 (444)
T ss_dssp EEEEC-HHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCBHHHHHHHHHGGGGCHHHHTCGGGCC
T ss_pred eEeec-HHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCHHHHHHHHHHHHHHhcccccccccc
Confidence 34444 4567889999999999999999999999999 554 788999 9999999999998865 231
Q ss_pred --ccCCCCCCCCCceeEecCCCc-cccCCCCCcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHH
Q psy9913 70 --YPSPLNYKGYPKSICTSVNNV-ACHGIPDSRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQAL 146 (309)
Q Consensus 70 --~~~~~~~~~~~~~v~~g~~~~-~~h~~p~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~ 146 (309)
........+|++++++|.|.. .+|+.|++++|+ ||+|++|+|+.|+||++|++|||++| ++++++++|+++++++
T Consensus 242 ~~~~~~~~~~~f~~iv~~g~n~~~~~H~~~~~~~l~-gd~v~iD~g~~~~gy~sD~tRT~~v~-~~~~~~~~y~~v~~a~ 319 (444)
T 3cb6_A 242 GDIDLDQLEWCYTPIIQSGGSYDLKPSAITDDRNLH-GDVVLCSLGFRYKSYCSNVGRTYLFD-PDSEQQKNYSFLVALQ 319 (444)
T ss_dssp TTCCGGGEEESSCCEEECTTCCCCSTTCCCCSSBCC-SSEEEEEECEEETTEECCEEEEEEES-CCHHHHHHHHHHHHHH
T ss_pred ccccccccccccCceEeccCCcCceeccCCCCCccc-CCEEEEEEeEeeCCEeeeeeEEEEec-CCHHHHHHHHHHHHHH
Confidence 100001236999999999998 999999999998 99999999999999999999999998 7999999999999999
Q ss_pred HHHHHHhcCCCchhHHHHHHHHHHHhCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceee
Q psy9913 147 HAAISVVKPGEYFSTIGSIIENVAKQNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVP 226 (309)
Q Consensus 147 ~~~~~~lkpG~~~~dv~~~~~~~~~~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 226 (309)
+++++++|||++++||++++++++++.|. |++.+|.
T Consensus 320 ~~~~~~~~pG~~~~~v~~~~~~~~~~~~~---------g~~~~~~----------------------------------- 355 (444)
T 3cb6_A 320 KKLFEYCRDGAVIGDIYTKILGLIRAKRP---------DLEPNFV----------------------------------- 355 (444)
T ss_dssp HHHHHHCSTTCBHHHHHHHHHHHHHHHCG---------GGGGGBC-----------------------------------
T ss_pred HHHHHHcCCCCcHHHHHHHHHHHHHhhhh---------hhHhhcc-----------------------------------
Confidence 99999999999999999999999998741 4445554
Q ss_pred ccccccccccccCCCcccccCCCCCCCccCCcEEEEcccccc-CCceeEEecCCceEEecCCCceeeeeEEEEEcCCCee
Q psy9913 227 EILGHGIGSYFHGPPDIFHTKNDYPGKMEPGMTFTIEPVLTN-GNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYDGYK 305 (309)
Q Consensus 227 ~~~GHgiG~~~~e~p~i~~~~~~~~~~l~~gmv~~iep~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~G~e 305 (309)
|.+|||+|+++||.|.+. .++.+.+|++||||++||++|. +. +++| .+.++.+|+|+||+|+||++|+|
T Consensus 356 h~~GHgiGl~~he~p~~~--~~~~~~~l~~Gmv~tiEPgiy~~~~------~~~~--~~~~~~~gvriEd~v~vt~~g~e 425 (444)
T 3cb6_A 356 RNLGAGIGIEFRESSLLV--NAKNPRVLQAGMTLNLSIGFGNLIN------PHPK--NSQSKEYALLLIDTIQITRSDPI 425 (444)
T ss_dssp SCCEEECSSSSCBGGGCC--STTCCCBCCTTCEEEEEEEEEEEEC------SSCC--TTSCSEEEEEEEEEEECCSSSCE
T ss_pred cccccccCccccCCcccc--CCCCCcccCCCCEEEEEeccccccC------cccc--cccCCceEEEEEEEEEECCCCce
Confidence 999999999999987432 2356789999999999999982 11 1111 13356679999999999999999
Q ss_pred ecCC
Q psy9913 306 VLTY 309 (309)
Q Consensus 306 ~LT~ 309 (309)
+||.
T Consensus 426 ~Lt~ 429 (444)
T 3cb6_A 426 VFTD 429 (444)
T ss_dssp ETTC
T ss_pred eccc
Confidence 9984
No 29
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A*
Probab=100.00 E-value=8.2e-46 Score=351.89 Aligned_cols=248 Identities=24% Similarity=0.323 Sum_probs=209.0
Q ss_pred CCCcccc--CCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHH----CCCccCCCCCCCCCceeEecC
Q psy9913 14 SPEVPEV--KTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIIN----NGAYPSPLNYKGYPKSICTSV 87 (309)
Q Consensus 14 v~~~R~i--Ks~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~----~G~~~~~~~~~~~~~~v~~g~ 87 (309)
..++|.+ ||++||+.||+|++++.++++.+.+.++||+||.||++.+++.+.+ +|+.. ..+||++ +|.
T Consensus 152 ~eelR~i~iKs~~EIe~mR~A~~Ia~~al~~~~~~ikpGvTe~ELa~~le~~~~~~i~~~Ga~~----g~~FP~i--vSv 225 (478)
T 1b6a_A 152 SEEKKALDQASEEIWNDFREAAEAHRQVRKYVMSWIKPGMTMIEICEKLEDCSRKLIKENGLNA----GLAFPTG--CSL 225 (478)
T ss_dssp -CHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHCCTTSBHHHHHHHHHHHHHHHHTCBTTTE----EEEEEEE--EEE
T ss_pred HHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHHHHhcCCcc----cCCCCeE--EEC
Confidence 3567776 9999999999999999999999999999999999998888887664 46631 1357764 456
Q ss_pred CCccccCCCC---CcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHH
Q psy9913 88 NNVACHGIPD---SRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGS 164 (309)
Q Consensus 88 ~~~~~h~~p~---~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~ 164 (309)
|...+||.|+ +++|++||+|+||+|++|+||++|++|||++| ++++++|++++++++++++++|||++++||++
T Consensus 226 N~~v~Hg~P~~~d~r~Lk~GDiV~ID~G~~~dGY~sD~tRT~~Vg---~e~~~L~eav~eA~~aaI~~~kPG~~~~dI~~ 302 (478)
T 1b6a_A 226 NNCAAHYTPNAGDTTVLQYDDICKIDFGTHISGRIIDCAFTVTFN---PKYDTLLKAVKDATNTGIKCAGIDVRLCDVGE 302 (478)
T ss_dssp TTEEECCCCCTTCCCBCCTTCCEEEEEEEEETTEEEEEEEEECSS---GGGHHHHHHHHHHHHHHHHHCCTTCBHHHHHH
T ss_pred CCccccCCCCcccCccccCCCeEEEEEEEEECCEEEEEEEEEEeC---HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 9999999997 58999999999999999999999999999995 69999999999999999999999999999999
Q ss_pred HHHHHHHhCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccc-cccccCCCcc
Q psy9913 165 IIENVAKQNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGI-GSYFHGPPDI 243 (309)
Q Consensus 165 ~~~~~~~~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgi-G~~~~e~p~i 243 (309)
+++++++++|+.... ++|. +..+.|++|||| |+.+||.|.+
T Consensus 303 ai~~~i~~~G~~l~g--------~~~~------------------------------~~~v~h~~GHGIGGl~iHE~P~v 344 (478)
T 1b6a_A 303 AIQEVMESYEVEIDG--------KTYQ------------------------------VKPIRNLNGHSIGQYRIHAGKTV 344 (478)
T ss_dssp HHHHHHHTCEEEETT--------EEEE------------------------------CEECTTCEEEEEBTTBSCCSCEE
T ss_pred HHHHHHHHcCCCccc--------cccc------------------------------ceeecCcceeCCCCccccCCCcc
Confidence 999999999875210 1000 012238999999 7899999888
Q ss_pred cccCCCCCCCccCCcEEEEccccccCCceeEEec----------C-----------------------------Cce---
Q psy9913 244 FHTKNDYPGKMEPGMTFTIEPVLTNGNGQVTMLE----------D-----------------------------GWT--- 281 (309)
Q Consensus 244 ~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~----------~-----------------------------~~~--- 281 (309)
+++.++.+.+|++||||+|||+++.+.+ .++.. + +|.
T Consensus 345 P~~~~~~~~~Le~GMVftIEP~i~~G~G-~~~ed~~~~iy~~~~d~~~~~lk~~~ar~ll~~I~~~f~tlpF~~rw~d~~ 423 (478)
T 1b6a_A 345 PIVKGGEATRMEEGEVYAIETFGSTGKG-VVHDDMECSHYMKNFDVGHVPIRLPRTKHLLNVINENFGTLAFCRRWLDRL 423 (478)
T ss_dssp ESSSSCCCCBCCTTCEEEEEEEEESSCS-CCEECSCCCEEEECTTCCCCCCCSHHHHHHHHHHHHHTTTSCEEHHHHHHT
T ss_pred ceecCCCCCEeCCCCEEEEeCeeECCCC-EEEECCceeEEeecccccccccccHHHHHHHHHHHHhcCCCCccchhhccc
Confidence 7776677899999999999999997753 22221 1 573
Q ss_pred -----------------------EEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 282 -----------------------IVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 282 -----------------------~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
+++.+|++++|+|+||+||++|+++||.
T Consensus 424 ~~~~~~~gl~~l~~~g~v~~yp~l~t~dg~~~AQfEHTvlvt~~g~evlT~ 474 (478)
T 1b6a_A 424 GESKYLMALKNLCDLGIVDPYPPLCDIKGSYTAQFEHTILLRPTCKEVVSR 474 (478)
T ss_dssp TCCSCHHHHHHHHHTTSEEEECCEECSTTCCEEEEEEEEEECSSCEEETTC
T ss_pred chhHHHHHHHHHHHCCCcccCCceEcCCCCEEeeEEEEEEECCCccEEeCC
Confidence 7899999999999999999999999994
No 30
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=100.00 E-value=5.3e-45 Score=338.09 Aligned_cols=253 Identities=19% Similarity=0.224 Sum_probs=214.3
Q ss_pred CCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCccc
Q psy9913 13 KSPEVPEVKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVAC 92 (309)
Q Consensus 13 ~v~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~ 92 (309)
...++|.+|+++||+.||+|++|+.++++.+.+.++||+|+.||++.+++.+++.|..+.+.+ .+|| +|+|.|+..+
T Consensus 32 ~~~~~~~~~~~d~l~~~R~Aa~I~~~v~~~~~~~ikpG~t~~el~~~~e~~i~~~~~~~~~~g-~~FP--~ciSvN~~v~ 108 (358)
T 3fm3_A 32 RNMEIENFTESDILQDARRAAEAHRRARYRVQSIVRPGITLLEIVRSIEDSTRTLLKGERNNG-IGFP--AGMSMNSCAA 108 (358)
T ss_dssp TSCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTTTSGGGG-EEEE--EEEEETTEEE
T ss_pred hHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHhcCCCcccC-CCCC--cEEeeCCEEE
Confidence 456899999999999999999999999999999999999999999999999999988765332 2566 7889999999
Q ss_pred cCCC----CCcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHH
Q psy9913 93 HGIP----DSRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIEN 168 (309)
Q Consensus 93 h~~p----~~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~ 168 (309)
||.| ++++|++||+|+||+|+.++||++|++|||.+|+ ..+++++++.+++++++++++||++..+|..++++
T Consensus 109 Hg~P~~~~~~~~L~~GDiV~ID~G~~~dGY~sD~arT~~vg~---~~~~l~~~~~~al~aai~~~~pG~~~~dig~ai~~ 185 (358)
T 3fm3_A 109 HYTVNPGEQDIVLKEDDVLKIDFGTHSDGRIMDSAFTVAFKE---NLEPLLVAAREGTETGIKSLGVDVRVCDIGRDINE 185 (358)
T ss_dssp CCCCCTTCCCCBCCTTCEEEEEEEEEETTEEEEEEEEEECCG---GGHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHH
T ss_pred ecCCCCCCCCeEecCCCEEEEEeeEEECCEEEEEEEeccccc---cchhHHHHHHHHHHHHHHhhhcCCccccccHHHHH
Confidence 9998 4789999999999999999999999999999975 34567888999999999999999999999999999
Q ss_pred HHHhCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccc-cccCCCcccccC
Q psy9913 169 VAKQNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGS-YFHGPPDIFHTK 247 (309)
Q Consensus 169 ~~~~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~-~~~e~p~i~~~~ 247 (309)
+++++|+...... | .+..+.+++|||+|. ..|+.|.++++.
T Consensus 186 v~~~~~~~v~~~~-------~-------------------------------~~~~v~~~~GHgiG~~~~he~~~ip~~~ 227 (358)
T 3fm3_A 186 VISSYEVEIGGRM-------W-------------------------------PIRPISDLHGHSISQFRIHGGISIPAVN 227 (358)
T ss_dssp HHTTCEEECSSSE-------E-------------------------------ECEECTTCCEEEEBTTBSCCSCEECSSC
T ss_pred HHhhccceecccc-------c-------------------------------cccccccccccccCCccccCCCccCccC
Confidence 9999886542200 0 001112788999997 569999998887
Q ss_pred CCCCCCccCCcEEEEccccccCCceeEEec------------------------------------------CCce----
Q psy9913 248 NDYPGKMEPGMTFTIEPVLTNGNGQVTMLE------------------------------------------DGWT---- 281 (309)
Q Consensus 248 ~~~~~~l~~gmv~~iep~~~~~~~~~~~~~------------------------------------------~~~~---- 281 (309)
+..+.+|++||||+|||++..+.+.+...+ |.|.
T Consensus 228 ~~~~~~le~GmV~tIEP~is~G~g~v~~~~~~~~~~~~~~~~~~l~~~~~r~~l~~i~~~~~tlPF~~R~l~d~~~~~~~ 307 (358)
T 3fm3_A 228 NRDTTRIKGDSFYAVETFATTGKGSIDDRPPCSHFVLNTYKSRKLFNKDLIKVYEFVKDSLGTLPFSPRHLDYYGLVKGG 307 (358)
T ss_dssp CCCCCBCCSSEEEEEEEEEESSCSCCEECSCCCCEEECSSCCCCCCSHHHHHHHHHHHHHTTTCCBCHHHHHHTTCSTTC
T ss_pred CCCCcEEeeeeeEEeeeeeecCCceEEECCCceEEEeccccchhhccHHHHHHHHHHHHhcCCcccchhhhcccchhhhh
Confidence 777889999999999999988776654322 2332
Q ss_pred -------------------EEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 282 -------------------IVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 282 -------------------~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
+.+++|++++|+|+||+||++|+|+||.
T Consensus 308 ~~~~l~~l~~~~iv~~YpvL~~~dg~~~AqfEhTvlvt~~G~eilT~ 354 (358)
T 3fm3_A 308 SLKSVNLLTMMGLLTPYPPLNDIDGCKVAQFEHTVYLSEHGKEVLTR 354 (358)
T ss_dssp SHHHHHHHHHTTSEEECCCEECSTTCCEEEEEEEEEEETTEEEESSC
T ss_pred HHHHHHHHHhcCCcccCCceEeeCCCEEEEEEEEEEECCCCCEEcCC
Confidence 2578999999999999999999999994
No 31
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=100.00 E-value=2.8e-44 Score=332.35 Aligned_cols=246 Identities=19% Similarity=0.203 Sum_probs=207.7
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCccccCCCC--
Q psy9913 20 VKTESQIRLMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVACHGIPD-- 97 (309)
Q Consensus 20 iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~h~~p~-- 97 (309)
..|++||+.||+|++++.++++.+.+.++||+||.||++.+++.+++.|+.+. ..+.+||+ ++|.|+..+||.|+
T Consensus 41 ~~s~~EI~~mR~A~~I~~~a~~~~~~~ikpG~te~El~~~ie~~~~~~g~~~~-~~~~aFpt--~~s~N~~~~H~~P~~~ 117 (360)
T 2nw5_A 41 FTESDILQDARRAAEAHRRARYRVQSIVRPGITLLEIVRSIEDSTRTLLKGER-NNGIGFPA--GMSMNSCAAHYTVNPG 117 (360)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTTTSG-GGGEEEEE--EEEETTEEECCCCCTT
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHhcCCCc-cCccccCc--eeeccccccCCCCCcc
Confidence 34999999999999999999999999999999999999999999999887542 22345775 36899999999997
Q ss_pred --CcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhCCc
Q psy9913 98 --SRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQNKL 175 (309)
Q Consensus 98 --~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~g~ 175 (309)
+++|++||+|+||+|++++||++|++|||++ +++++++|+++++|++++++++|||++++||+++++++++++|+
T Consensus 118 d~~~~L~~GDlV~ID~G~~~~GY~sD~tRT~~v---~~~~~~l~~av~eA~~aai~~~kPGv~~~dI~~ai~~vi~~~G~ 194 (360)
T 2nw5_A 118 EQDIVLKEDDVLKIDFGTHSDGRIMDSAFTVAF---KENLEPLLVAAREGTETGIKSLGVDVRVCDIGRDINEVISSYEV 194 (360)
T ss_dssp CCCCBCCTTCEEEEEEEEEETTEEEEEEEEEEC---CGGGHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHTTCEE
T ss_pred cCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEc---CHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCC
Confidence 7899999999999999999999999999999 46899999999999999999999999999999999999999876
Q ss_pred eecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeeccccccccc-cccCCCcccccCCCCCCCc
Q psy9913 176 RVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIGS-YFHGPPDIFHTKNDYPGKM 254 (309)
Q Consensus 176 ~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG~-~~~e~p~i~~~~~~~~~~l 254 (309)
.... ..++ +..+.|++|||||+ .+||.|.++++.++.+.+|
T Consensus 195 ~~~g----~~~~----------------------------------~~~v~~~~GHgIG~y~iHe~P~I~~~~~~~~~~L 236 (360)
T 2nw5_A 195 EIGG----RMWP----------------------------------IRPISDLHGHSISQFRIHGGISIPAVNNRDTTRI 236 (360)
T ss_dssp ECSS----SEEE----------------------------------CEECTTCCEEEEBTTBSCCSCEECSSCCCCCCBC
T ss_pred cccc----cccc----------------------------------ccccCCeeEeeecCceeccCCEeccccCCCCcEE
Confidence 4110 0000 00112899999999 9999999987666778999
Q ss_pred cCCcEEEEccccccCCceeEEec------------------------------------------CC-------------
Q psy9913 255 EPGMTFTIEPVLTNGNGQVTMLE------------------------------------------DG------------- 279 (309)
Q Consensus 255 ~~gmv~~iep~~~~~~~~~~~~~------------------------------------------~~------------- 279 (309)
++||||+|||+++.+.++++--. +.
T Consensus 237 e~GmV~aIEP~i~~G~G~Vr~~~~~~~y~~~~~~~~~l~~~~~r~~l~~i~~~f~~lpF~~R~l~~~~~~~~~~~~~l~~ 316 (360)
T 2nw5_A 237 KGDSFYAVETFATTGKGSIDDRPPCSHFVLNTYKSRKLFNKDLIKVYEFVKDSLGTLPFSPRHLDYYGLVKGGSLKSVNL 316 (360)
T ss_dssp CSSEEEEEEEEEESSCSCCEECSCCCCEEECSSCCCCCCSHHHHHHHHHHHHHTTTCCBCHHHHHHTTCSTTCSHHHHHH
T ss_pred eCCcEEEEeceEECCcceEEeCCceeEEEEcCCCCCCCCCHHHHHHHHHHHHhCCCCCcChhhhcccccchHHHHHHHHH
Confidence 99999999999997766653100 00
Q ss_pred ----------ceEEecCCCceeeeeEEEEEcCCCeeecCC
Q psy9913 280 ----------WTIVTEDDSRTAQFEHTVLVTYDGYKVLTY 309 (309)
Q Consensus 280 ----------~~~~~~~~~~~~~~edtvlVt~~G~e~LT~ 309 (309)
-.+.+++|.+.+|+|+||+|+++|++++|.
T Consensus 317 l~~~g~~~~ypvl~e~~g~~vaqfe~Tv~~~~~g~~~~t~ 356 (360)
T 2nw5_A 317 LTMMGLLTPYPPLNDIDGCKVAQFEHTVYLSEHGKEVLTR 356 (360)
T ss_dssp HHHTTSEEECCCEECSTTCCEEEEEEEEEEETTEEEECSC
T ss_pred HHHCCCcccCCccEecCCCEEEEEEEEEEECCCCcEEecC
Confidence 015667899999999999999999999984
No 32
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens}
Probab=100.00 E-value=9.5e-44 Score=351.71 Aligned_cols=233 Identities=19% Similarity=0.118 Sum_probs=202.0
Q ss_pred cCCCCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHh----c-cCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCC
Q psy9913 6 FASGKPGKSPEVPEVKTESQIRLMHESCKLARFVLDCIAEH----I-KVNMTTNELDVFAHELIINNGAYPSPLNYKGYP 80 (309)
Q Consensus 6 ~~~~~~~~v~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~----i-~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~ 80 (309)
+++. ++.+..+|++||++||+.||+|++++..++.++++. + +||+||.|+++.++....+.+... ..+|+
T Consensus 308 ~v~~-~~~i~~~R~iK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~g~tE~el~~~l~~~~~~~~g~~----~~sf~ 382 (623)
T 3ctz_A 308 CCMP-YTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNWLEKEVPKGGVTEISAADKAEEFRRQQADFV----DLSFP 382 (623)
T ss_dssp EEES-SCHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCBHHHHHHHHHHHHHTSTTEE----EESSC
T ss_pred EEec-ccHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHhcCCCc----CCCCC
Confidence 4444 356788999999999999999999999998887754 5 799999999999987666543311 13599
Q ss_pred ceeEecCCCccccCCCC---CcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcC-C
Q psy9913 81 KSICTSVNNVACHGIPD---SRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKP-G 156 (309)
Q Consensus 81 ~~v~~g~~~~~~h~~p~---~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~lkp-G 156 (309)
+++++|.|...+||.|+ +++|++||+|++|+|++|+||++|+||||++|+++++++++|+++++++.++++++|| |
T Consensus 383 ~iv~~G~n~a~~H~~~~~~~~~~l~~gd~vliD~G~~y~gy~sDiTRT~~vG~~s~~~~~~y~~vl~a~~~~~~~~~p~G 462 (623)
T 3ctz_A 383 TISSTGPTGAIIHYAPVPETNRTLSLDEVYLIDSGAQYKDGTTDVTRTMHFETPTAYEKECFTYVLKGHIAVSAAVFPTG 462 (623)
T ss_dssp CEEEEGGGGGCTTCCCCGGGCCBCCTTSCEEEEECEEETTEECCEEEEECSSCCCHHHHHHHHHHHHHHHHHHTCCEETT
T ss_pred ceeeecCccccccCCCCCCCCcccCCCCEEEEEEeEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhCcCC
Confidence 99999999999999986 8899999999999999999999999999999999999999999999999999999999 9
Q ss_pred CchhHHHHHHHHHHHhCCceecccccccCccccccCCCcccccCCCCCCCCCCCceeehhhhccccceeecccccccc--
Q psy9913 157 EYFSTIGSIIENVAKQNKLRVVPEILGHGIGSYFHGAPDIFHTKNDYPGKMEPGSIIENVAKHNKLRVVPEILGHGIG-- 234 (309)
Q Consensus 157 ~~~~dv~~~~~~~~~~~g~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~GHgiG-- 234 (309)
+++.+|+.++++.+.+.|+. | +|.+|||+|
T Consensus 463 ~~~~~id~~ar~~l~~~G~~-------------~-----------------------------------~h~~GHgvG~~ 494 (623)
T 3ctz_A 463 TKGHLLDSFARSALWDSGLD-------------Y-----------------------------------LHGTGHGVGSF 494 (623)
T ss_dssp CBGGGGGGGGTHHHHHTTCC-------------C-----------------------------------SSCSEEBCCSS
T ss_pred CcHHHHHHHHHHHHHHhCCC-------------C-----------------------------------CCCccccCCCC
Confidence 99999999999999998762 1 289999999
Q ss_pred ccccCCCc-ccccCCCCCCCccCCcEEEEccccccCCceeEEecCCceEEecCCCceeeeeEEEEEcCC-----------
Q psy9913 235 SYFHGPPD-IFHTKNDYPGKMEPGMTFTIEPVLTNGNGQVTMLEDGWTIVTEDDSRTAQFEHTVLVTYD----------- 302 (309)
Q Consensus 235 ~~~~e~p~-i~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edtvlVt~~----------- 302 (309)
+.+||.|. +... ...+.+|++||||++||++|.+ +.+|+|+||+|+||++
T Consensus 495 l~vHE~P~~i~~~-~~~~~~L~~GMv~tiEPGiy~~-----------------g~~GiRiEd~vlVt~~~~~~~~~~~~~ 556 (623)
T 3ctz_A 495 LNVHEGPCGISYK-TFSDEPLEAGMIVTDEPGYYED-----------------GAFGIRIENVVLVVPVKTKYNFNNRGS 556 (623)
T ss_dssp SCSSCCSCEECTT-CSCSCBCCTTCEEEECCEEEET-----------------TTEEEECBEEEEEEEECCSSCCSSSCE
T ss_pred CCCCCCCccCCCC-CCCCCccCCCeEEEEeCcEEEC-----------------CceEEEEeeEEEEecCCcccccccccc
Confidence 99999997 4422 2356899999999999999953 3347899999999998
Q ss_pred -CeeecCC
Q psy9913 303 -GYKVLTY 309 (309)
Q Consensus 303 -G~e~LT~ 309 (309)
|+|+||.
T Consensus 557 lg~e~LT~ 564 (623)
T 3ctz_A 557 LTLEPLTL 564 (623)
T ss_dssp EEEEECCC
T ss_pred cCCceeee
Confidence 8999983
No 33
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2e-24 Score=206.83 Aligned_cols=254 Identities=17% Similarity=0.252 Sum_probs=178.4
Q ss_pred CCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHhc---------cCCCCHHHHHHHHHHHHHHCC--CccCCCCCCCCC
Q psy9913 12 GKSPEVPEVKTESQIRLMHESCKLARFVLDCIAEHI---------KVNMTTNELDVFAHELIINNG--AYPSPLNYKGYP 80 (309)
Q Consensus 12 ~~v~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i---------~pG~te~el~~~~~~~~~~~G--~~~~~~~~~~~~ 80 (309)
+++-+-+.+-+++-++.||.|++|+.++++.+.+.+ +||++..|||...+..+.+.. ++.......++.
T Consensus 32 ~~~lkekniln~dvltKYr~AgeIa~~vLk~v~~li~~G~~~~~~kpga~I~ELCe~GD~~I~e~~akvyk~K~~~KGIA 111 (614)
T 4b6a_t 32 QILLKDKNILQESVLNKYRTAGQIAQTALKYVTSLINDSYHSKTTQRQLTVPELCLLTDSFILTRLEQYYKNKVNERGIA 111 (614)
T ss_dssp ----CCSSSSCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHTTCCCBTTHHHHHHHHHHHHHHHTSSTTCSCCEEEE
T ss_pred hhhhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCCCcHHHHHHHHHHHHHHHHHhhhcCCcccCCCc
Confidence 344456678899999999999999999999999877 566888999999888887653 444444444455
Q ss_pred ceeEecCCCccccCCCC----------------------CcccCCCCeEEEeEEEEECCEEeeeEEEEEeCCC-------
Q psy9913 81 KSICTSVNNVACHGIPD----------------------SRPLEDGDIVNVDVTVYLNGYHGDCSATFCVGEV------- 131 (309)
Q Consensus 81 ~~v~~g~~~~~~h~~p~----------------------~~~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~------- 131 (309)
+++|+|.|++.+||+|. +.+|++||+|+||+|++++||.+|+++|+++|..
T Consensus 112 FPT~ISvN~~vaHysP~~~D~~~~~~~~~~~~~~~~~~~~~vLk~GDVVKIDLGvHIDGyiadvA~Tvvvg~~~~~~~~~ 191 (614)
T 4b6a_t 112 IPTTIDIDQISGGWCPEIDDTQNLLNWNKGKDSTFASSVTGTLRPGDLVKITLGVHIDGYTSEVSHTMVIYPVDETKPIL 191 (614)
T ss_dssp EEEEEEETTEEECCCCCTTS------------------CCCBCCTTCEEEEEEEEEETTEEEEEEEEEECCCCTTTSTTT
T ss_pred cCceecHHHcccCCCCCCcchhhcccccccccccccccccccccCCCEEEEEeeEEECCeEEEEEEEEEECCcccccccc
Confidence 55889999999999983 2379999999999999999999999999999742
Q ss_pred ------CHHHHHHHHHHHHHHHHHHHHh----------------cCCCchhHHHHHHHHHHHhCCceecccccccCcccc
Q psy9913 132 ------DASGKFLVNVAQQALHAAISVV----------------KPGEYFSTIGSIIENVAKQNKLRVVPEILGHGIGSY 189 (309)
Q Consensus 132 ------~~~~~~~~~~~~~a~~~~~~~l----------------kpG~~~~dv~~~~~~~~~~~g~~~~~~~~~hg~~~~ 189 (309)
+....++..+++.|.+++++++ +||++..+|...++++++.++|.+++++.+|++.+|
T Consensus 192 ~~~~pvtGrkADli~AA~~A~EaalrLl~~~~~~e~l~a~l~~~~~gvt~~~It~~IekvaksY~ck~Vegl~sH~i~r~ 271 (614)
T 4b6a_t 192 QPTGPLLGGKADAVAAAHIAMETVVALLACALTPEKLPASLGGTSSGITGQLIRTIVDTIARSYNCGVVPGSRVRRIRRF 271 (614)
T ss_dssp TTTSCBCHHHHHHHHHHHHHHHHHHHHC----------------STTCBHHHHHHHHHHHHHTTTCEECTTCEEEEEBTT
T ss_pred cccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhhhccCCCcchHHHHHHHHHHHhcCCcEEecccccccccce
Confidence 3455689999999999999887 999999999999999999999999999999999999
Q ss_pred ccCCCcccccCCCCCCCCCCCcee--ehhhhccccceeeccccccccccccCCCcccccCCCCCCCccCCcEEEEccccc
Q psy9913 190 FHGAPDIFHTKNDYPGKMEPGSII--ENVAKHNKLRVVPEILGHGIGSYFHGPPDIFHTKNDYPGKMEPGMTFTIEPVLT 267 (309)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~GHgiG~~~~e~p~i~~~~~~~~~~l~~gmv~~iep~~~ 267 (309)
..+++..+.....+.+...+.+.. +.......... .....+-+....+.+ ..+..+.++++|+||+||+.+.
T Consensus 272 ~i~g~k~Ii~~~~~kgv~~~e~hqe~~~~~~~~~k~~--~~v~~~~~~~~~~~~----~~~~Dd~~~EeGEVYaIDi~~S 345 (614)
T 4b6a_t 272 LAGQNEGIVAEREYKGVVWTESHQEADLLSNTDAKDL--TVVDRGQSTPFTNVS----AIPSDDFVVQSGEVYLIDLKMA 345 (614)
T ss_dssp BSSCSCEEESS--------------------------------------CCHHH----HTTSCCCBCCTTCEEEEEEEEE
T ss_pred ecCCCceeccccccccccccccchhhhhhcccccccc--ccccccccccccccc----cccCCceeecCCcEEEEEEEee
Confidence 888777665544433222111000 00000000000 000000000000000 1234678999999999999887
Q ss_pred cCCc
Q psy9913 268 NGNG 271 (309)
Q Consensus 268 ~~~~ 271 (309)
.+++
T Consensus 346 TG~G 349 (614)
T 4b6a_t 346 SLEH 349 (614)
T ss_dssp SSCC
T ss_pred cCCC
Confidence 6654
No 34
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=96.64 E-value=0.0083 Score=54.96 Aligned_cols=43 Identities=19% Similarity=0.176 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhCCc
Q psy9913 133 ASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQNKL 175 (309)
Q Consensus 133 ~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~g~ 175 (309)
..+|++-+.+.++++.+.+.+|||++..||.+.+++.+++.|.
T Consensus 46 ~~~R~Aa~I~~~v~~~~~~~ikpG~t~~el~~~~e~~i~~~~~ 88 (358)
T 3fm3_A 46 QDARRAAEAHRRARYRVQSIVRPGITLLEIVRSIEDSTRTLLK 88 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHhcC
Confidence 3568899999999999999999999999999999999988764
No 35
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans}
Probab=96.47 E-value=0.018 Score=53.14 Aligned_cols=98 Identities=10% Similarity=0.150 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCC-ccccCCC-CCcccCCCC
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNN-VACHGIP-DSRPLEDGD 105 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~-~~~h~~p-~~~~l~~gd 105 (309)
.+|++.+++.++..++++.++||++-.||...+++.+.+.|....+.. .+.-.+|.+- ..+.-.+ ++.+|++|.
T Consensus 259 ~~~~~~~~v~~a~~~~~~~~~pG~~~~~v~~~~~~~~~~~G~~~~~~h----~~GHgiGl~~hE~P~i~~~~~~~L~~Gm 334 (378)
T 4ege_A 259 DVAQQYSALQRAQRAAVDAVRPGVTAAQVDAAARDVLADAGLAEYFVH----RTGHGIGLCVHEEPYIVAGNELPLVAGM 334 (378)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCGGGCCS----CSEEECSSSSSEEEEECTTCCCBCCTTB
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCCcCCC----CCcccCCCCcCCCCccCCCCCCccCCCC
Confidence 356777888889999999999999999999999999999987542111 1112233221 0111122 567899999
Q ss_pred eEEEeEEEEECC-EEeeeEEEEEeC
Q psy9913 106 IVNVDVTVYLNG-YHGDCSATFCVG 129 (309)
Q Consensus 106 ~v~iD~g~~~~G-y~~d~~Rt~~vG 129 (309)
++.++-|....| +..-+..|++|.
T Consensus 335 v~tiEPgiy~~g~~gvriEd~v~Vt 359 (378)
T 4ege_A 335 AFSIEPGIYFPGRWGARIEDIVVVT 359 (378)
T ss_dssp EEEECCEEEETTTEEEECBEEEEEE
T ss_pred EEEECCEEEeCCccEEEEeeEEEEe
Confidence 999999998776 556677788883
No 36
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis}
Probab=96.41 E-value=0.025 Score=51.43 Aligned_cols=98 Identities=17% Similarity=0.057 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCc-cccCCC-CCcccCCCC
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNV-ACHGIP-DSRPLEDGD 105 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~-~~h~~p-~~~~l~~gd 105 (309)
..|++.+++.++..++++.++||++-.+|...+++.+.+.|....+. ..+.-.+|.+-. .|...+ ++.+|++|.
T Consensus 239 ~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~~~g~~~~~~----h~~GHgiGl~~he~p~i~~~~~~~l~~Gm 314 (356)
T 3q6d_A 239 KLKEIYNIVLEAQLRGVNGIKAGLTGREADALTRDYITEKGYGEYFG----HSTGHGIGLEIHEAPGLAFRSDTVLEPGM 314 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCGGGCC----SCSEEECSSSSSEEEEESTTCCCBCCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcccCC----CCCcccCCCCcCcCCCCCCCCCCCcCCCC
Confidence 45677788889999999999999999999999999999998754211 111122332210 111122 467899999
Q ss_pred eEEEeEEEEECC-EEeeeEEEEEeC
Q psy9913 106 IVNVDVTVYLNG-YHGDCSATFCVG 129 (309)
Q Consensus 106 ~v~iD~g~~~~G-y~~d~~Rt~~vG 129 (309)
++.++-|....| +..-+..|+.|.
T Consensus 315 v~tiEPgiy~~g~~gvriEd~v~vt 339 (356)
T 3q6d_A 315 AVTVEPGIYIPGIGGVRIEDDIIVT 339 (356)
T ss_dssp EEEECCEEEETTTEEEECBEEEEEC
T ss_pred EEEECCEEEECCCCeEEEccEEEEe
Confidence 999999998876 566677788884
No 37
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A
Probab=96.24 E-value=0.029 Score=51.16 Aligned_cols=98 Identities=11% Similarity=0.104 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCC-ccccCCC-CCcccCCCC
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNN-VACHGIP-DSRPLEDGD 105 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~-~~~h~~p-~~~~l~~gd 105 (309)
..|++.+++.++..++++.++||++-.||...+++.+.+.|....+.. .+.-.+|.+- ..+...+ ++.+|++|.
T Consensus 239 ~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~~~g~~~~~~h----~~GHgiGl~~he~p~i~~~~~~~l~~Gm 314 (356)
T 1wn1_A 239 RLVKIYEVVKDAQESAFKAVREGIKAKDVDSRAREVISKAGYGEYFIH----RTGHGLGLDVHEEPYIGPDGEVILKNGM 314 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHCBTTSBHHHHHHHHHHHHHTTTCGGGCCS----CSEEECSSSSSEEEEESTTCCCBCCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcccCCC----CCcccCCCccCCCcccCCCCCCCcCCCC
Confidence 457777888899999999999999999999999999999887542110 1112233221 1122222 567899999
Q ss_pred eEEEeEEEEECC-EEeeeEEEEEeC
Q psy9913 106 IVNVDVTVYLNG-YHGDCSATFCVG 129 (309)
Q Consensus 106 ~v~iD~g~~~~G-y~~d~~Rt~~vG 129 (309)
++.+.-|....| +..-+.-|+.|.
T Consensus 315 v~tiEPgiy~~g~~gvriEd~v~Vt 339 (356)
T 1wn1_A 315 TFTIEPGIYVPGLGGVRIEDDIVVD 339 (356)
T ss_dssp EEEECCEEEETTTEEEECBEEEEEE
T ss_pred EEEECCeeEeCCCcEEEEeeEEEEe
Confidence 999999998754 666677788884
No 38
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=96.14 E-value=0.028 Score=49.00 Aligned_cols=83 Identities=16% Similarity=0.098 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCC----ccccC-CC-CCccc
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNN----VACHG-IP-DSRPL 101 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~----~~~h~-~p-~~~~l 101 (309)
..+++.+++.++++++++.++||++-.||...+++.+.+.|..... .+ .. -.+|.+- ..+++ .+ ++.+|
T Consensus 131 ~~~~~~~~v~~a~~~~i~~~kpG~~~~~v~~~~~~~~~~~G~~~~~-~~--~G--HgiG~~~he~p~i~~~~~~~~~~~L 205 (262)
T 1o0x_A 131 RGKELVRVTREVLEKAIKMIKPGIRLGDVSHCIQETVESVGFNVIR-DY--VG--HGVGRELHEDPQIPNYGTPGTGVVL 205 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTSBHHHHHHHHHHHHHHTTCEECC-SS--CE--EECSSSSSEEEEECSCCCTTCSCBC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcccC-Cc--cc--CcccccccCCCccCCCCCCCCCCcc
Confidence 4677788888999999999999999999999999999998875311 01 11 1222211 12222 12 46789
Q ss_pred CCCCeEEEeEEEEE
Q psy9913 102 EDGDIVNVDVTVYL 115 (309)
Q Consensus 102 ~~gd~v~iD~g~~~ 115 (309)
++|.++.++-|...
T Consensus 206 ~~Gmv~tiEPgi~~ 219 (262)
T 1o0x_A 206 RKGMTLAIEPMVSE 219 (262)
T ss_dssp CTTCEEEECCEEES
T ss_pred CCCCEEEECCEEEc
Confidence 99999999998865
No 39
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A
Probab=96.13 E-value=0.041 Score=50.07 Aligned_cols=97 Identities=15% Similarity=0.091 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCC-ccccCCC-CCcccCCCC
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNN-VACHGIP-DSRPLEDGD 105 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~-~~~h~~p-~~~~l~~gd 105 (309)
..|++.+++.++..++++.++||++-.||...+++.+.+.|....+. ..+.-.+|.+- ..+...+ ++.+|++|.
T Consensus 236 ~~~~~~~~v~~a~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~~~~~~----h~~GHgiGl~~hE~p~i~~~~~~~l~~Gm 311 (351)
T 1wy2_A 236 KQKEIYEIVLEAQKKAVESAKPGITAKELDSIARNIIAEYGYGEYFN----HSLGHGVGLEVHEWPRVSQYDETVLREGM 311 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCGGGCC----SCSEEECSSSSSEEEEESTTCCCBCCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCcccCC----CCcccccCCCcCCCCccCCCCCCCcCCCC
Confidence 45677788899999999999999999999999999999988653211 01112233221 1121122 467899999
Q ss_pred eEEEeEEEEECC-EEeeeEEEEEe
Q psy9913 106 IVNVDVTVYLNG-YHGDCSATFCV 128 (309)
Q Consensus 106 ~v~iD~g~~~~G-y~~d~~Rt~~v 128 (309)
++.++-|....| +..-+..|+.|
T Consensus 312 v~tiEPgiy~~g~~gvriEd~v~V 335 (351)
T 1wy2_A 312 VITIEPGIYIPKIGGVRIEDTILI 335 (351)
T ss_dssp EEEECCEEEETTTEEEECBEEEEE
T ss_pred EEEECCEEEeCCCCeEEEeeEEEE
Confidence 999999998855 55556667776
No 40
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A
Probab=96.01 E-value=0.03 Score=49.47 Aligned_cols=99 Identities=14% Similarity=0.095 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCC--ccccCC-C-CCcccCC
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNN--VACHGI-P-DSRPLED 103 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~--~~~h~~-p-~~~~l~~ 103 (309)
..+++.+++.++++++++.++||++-.||...+++.+.+.|..... .+.++. +...... ...++. + ++.+|++
T Consensus 155 ~~~~~~~~v~~a~~~~i~~~kpG~~~~di~~~~~~~~~~~G~~~~~-~~~GHg--iG~~~hE~P~i~~~~~~~~~~~L~~ 231 (285)
T 3pka_A 155 EHRLLVDRTREATMRAINTVKPGRALSVIGRVIESYANRFGYNVVR-DFTGHG--IGTTFHNGLVVLHYDQPAVETIMQP 231 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTSBTTHHHHHHHHHHHTTTCEECC-SSCEEB--CSSSSSCSCEECSSCCTTCCCBCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHcCCccCC-Cccccc--CCCcccCCCcccCccCCCCCCccCC
Confidence 4567778888999999999999999999999999999998875311 111111 1111111 122221 2 4568999
Q ss_pred CCeEEEeEEEEEC------------------CEEeeeEEEEEeC
Q psy9913 104 GDIVNVDVTVYLN------------------GYHGDCSATFCVG 129 (309)
Q Consensus 104 gd~v~iD~g~~~~------------------Gy~~d~~Rt~~vG 129 (309)
|.++.++-|.... .+..-+..|+.|.
T Consensus 232 Gmv~tiEPgiy~~~~~~~~~~~gw~~~~~~g~~gvriEdtv~Vt 275 (285)
T 3pka_A 232 GMTFTIEPMINLGALDYEIWDDGWTVVTKDRKWTAQFEHTLLVT 275 (285)
T ss_dssp TBEEEECCEEESSCSCEEECTTSCCEEETTCCCEEECBEEEEEC
T ss_pred CCEEEEcCEEEcCCCceeecCCCceEEecCCCcEEEEeeEEEEC
Confidence 9999999998752 2344566788874
No 41
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}
Probab=95.99 E-value=0.043 Score=49.89 Aligned_cols=98 Identities=15% Similarity=0.088 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCC-ccccCCC-CCcccCCCC
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNN-VACHGIP-DSRPLEDGD 105 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~-~~~h~~p-~~~~l~~gd 105 (309)
..|++.+++.++..++++.++||++-.||...+++.+.+.|....+. ..+.-.+|.+- ..+...+ ++.+|++|.
T Consensus 242 ~~~~~~~~v~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~~~~~~----h~~GHgiGl~~he~p~i~~~~~~~l~~gm 317 (359)
T 2zsg_A 242 EVKEVHSIVLEAQERALKIAKAGVTGKLLDSVAREFIREKGYGEFFG----HSLGHGIGLEVHEGPAISFRNDSPLPENV 317 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCGGGBC----SCSEEECSSSSSEEEEESTTCCCBCCTTB
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCcccCC----CCCccccCcccCCCCCcCCCCCCCcCCCC
Confidence 45777888889999999999999999999999999999998753211 11112233221 1121122 467899999
Q ss_pred eEEEeEEEEECC-EEeeeEEEEEeC
Q psy9913 106 IVNVDVTVYLNG-YHGDCSATFCVG 129 (309)
Q Consensus 106 ~v~iD~g~~~~G-y~~d~~Rt~~vG 129 (309)
++.+.-|....| +..-+.-|+.|.
T Consensus 318 v~tiEPgiy~~~~~gvriEd~v~vt 342 (359)
T 2zsg_A 318 VFTVEPGIYLEGKFGIRIEEDVVLK 342 (359)
T ss_dssp EEEECCEEEETTTEEEECBEEEEEE
T ss_pred EEEECCEEEECCCcEEEEeeEEEEc
Confidence 999999998866 456666788883
No 42
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=95.98 E-value=0.076 Score=46.12 Aligned_cols=83 Identities=6% Similarity=-0.032 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCC--C--ccccC-CC-CCccc
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVN--N--VACHG-IP-DSRPL 101 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~--~--~~~h~-~p-~~~~l 101 (309)
..|++.+++.++++++++.++||++-.||...+++.+.+.|..... .+. .-.+|.+ . ..+++ .+ ++.+|
T Consensus 122 ~~~~~~~~v~~a~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~~~~~-~~~----GHgiG~~~hE~p~i~~~~~~~~~~~L 196 (262)
T 3mx6_A 122 KPKRLIQVTYDAMMKGIEVVRPGAKLGDIGYAIQSYAEKHNYSVVR-DYT----GHGIGRVFHDKPSILNYGRNGTGLTL 196 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSTTCBHHHHHHHHHHHHHHTTCEECC-SCC----EEECSSSSSEEEEECSSCCTTCSCBC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCccCC-Ccc----ccccCCcccCCCcccccCCCCCCCEe
Confidence 3566778888899999999999999999999999999998875311 011 1122321 1 12333 23 46789
Q ss_pred CCCCeEEEeEEEEE
Q psy9913 102 EDGDIVNVDVTVYL 115 (309)
Q Consensus 102 ~~gd~v~iD~g~~~ 115 (309)
++|.++.++-|...
T Consensus 197 ~~Gmv~tiEPgiy~ 210 (262)
T 3mx6_A 197 KEGMFFTVEPMINA 210 (262)
T ss_dssp CTTCEEEECCEEES
T ss_pred CCCCEEEEeCEEEc
Confidence 99999999998764
No 43
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=95.80 E-value=0.038 Score=48.08 Aligned_cols=83 Identities=10% Similarity=0.069 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCC----ccccCC-C-CCcccC
Q psy9913 29 MHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNN----VACHGI-P-DSRPLE 102 (309)
Q Consensus 29 ~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~----~~~h~~-p-~~~~l~ 102 (309)
.|++.+++.++++++++.++||++-.||...+++.+.+.|..... .+ +. -.+|..- ...++. + ++.+|+
T Consensus 119 ~~~l~~~v~~a~~~~i~~~kpG~~~~di~~a~~~~~~~~g~~~~~-~~--~G--HgiG~~~~e~p~i~~~~~~~~~~~L~ 193 (264)
T 3tb5_A 119 IDRLMEVTKKALYLGIEQAQVGNRIGDIGHAIQTYVEGEGYGVVR-DF--VG--HGIGPTIHESPMIPHYGEAGKGLRLK 193 (264)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHHHTTCEECC-SC--CE--EECSSSSSEEEEECSSCCTTCSCBCC
T ss_pred HHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHcCCceee-ec--ee--cCCCCCCccCCccCccccCCCCCCcc
Confidence 466778889999999999999999999999999999998874311 01 11 1122111 111111 2 346899
Q ss_pred CCCeEEEeEEEEEC
Q psy9913 103 DGDIVNVDVTVYLN 116 (309)
Q Consensus 103 ~gd~v~iD~g~~~~ 116 (309)
+|.++.|+-|..+.
T Consensus 194 ~Gmv~tiEPgiy~~ 207 (264)
T 3tb5_A 194 EGMVITIEPMVNTG 207 (264)
T ss_dssp TTCEEEECCEEESS
T ss_pred CCcEEEEeeeEEcC
Confidence 99999999987753
No 44
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...
Probab=95.78 E-value=0.07 Score=46.32 Aligned_cols=83 Identities=12% Similarity=0.125 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCC--C--ccccC-CC-CCccc
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVN--N--VACHG-IP-DSRPL 101 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~--~--~~~h~-~p-~~~~l 101 (309)
..|++.+++.+++.++++.++||++-.||...+++.+.+.|..... . + ..-..|.. . ...++ .+ ++.+|
T Consensus 120 ~~~~~~~~v~~a~~~~i~~~kpG~~~~~v~~~~~~~~~~~G~~~~~-~---~-~GHgiG~~~he~p~i~~~~~~~~~~~l 194 (263)
T 2gg2_A 120 MGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVR-E---Y-CGHGIGRGFHEEPQVLHYDSRETNVVL 194 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSTTCBHHHHHHHHHHHHHHTTCEECS-S---C-CEEECSSSSSEEEEECSSCCTTCCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEECC-C---c-ccccCCcceecCCcccCccCCCCCCCc
Confidence 4577778888999999999999999999999999999999875311 0 1 11122321 1 12222 23 46789
Q ss_pred CCCCeEEEeEEEEE
Q psy9913 102 EDGDIVNVDVTVYL 115 (309)
Q Consensus 102 ~~gd~v~iD~g~~~ 115 (309)
++|.++.++-|...
T Consensus 195 ~~Gmv~tiEPgi~~ 208 (263)
T 2gg2_A 195 KPGMTFTIEPMVNA 208 (263)
T ss_dssp CTTCEEEECCEEES
T ss_pred CCCCEEEEecEEEc
Confidence 99999999998764
No 45
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus}
Probab=95.74 E-value=0.066 Score=49.05 Aligned_cols=95 Identities=12% Similarity=0.204 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCce--eEecCCC-ccccCCC-CCcccCC
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKS--ICTSVNN-VACHGIP-DSRPLED 103 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~--v~~g~~~-~~~h~~p-~~~~l~~ 103 (309)
..|++.+++.++.+++++.++||++-.++...+++.+.+.|.... |+.. -.+|.+- ..|...| ++.+|++
T Consensus 260 ~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~~~g~~~~------~~h~~GHgiGl~~hE~P~i~~~~~~~L~~ 333 (377)
T 4fkc_A 260 EVKKVYEIVKEAQETAVQKVAEGIPAEVVDATARGIISKYGYGEY------FIHRTGHGLGIDVHEEPYISPGNKKILKD 333 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHCBTTCBHHHHHHHHHHHHHHTTCTTT------CCSCSEEECSSSSSEEEEECSSCCCBCCT
T ss_pred HHHHhhhhhHHHHHHHHHhhcCCcchhhhHHHHHHHHHHhccccc------CCCCCeEeCCCccccCCcccCCCCCEeCC
Confidence 356677788888999999999999999999999999999887542 2221 2233221 1122233 4578999
Q ss_pred CCeEEEeEEEEECC-EEeeeEEEEEe
Q psy9913 104 GDIVNVDVTVYLNG-YHGDCSATFCV 128 (309)
Q Consensus 104 gd~v~iD~g~~~~G-y~~d~~Rt~~v 128 (309)
|.++.|.-|....| +..-+.-|+.|
T Consensus 334 Gmv~tiEPgiy~~g~~GvriEd~v~V 359 (377)
T 4fkc_A 334 GMVFTIEPGIYLQGKFGVRIEDDVAL 359 (377)
T ss_dssp TCEEEECCEEEETTTEEEECBEEEEE
T ss_pred CCEEEECCeeEECCccEEEEccEEEE
Confidence 99999999988776 44555667777
No 46
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*
Probab=95.73 E-value=0.055 Score=46.61 Aligned_cols=97 Identities=12% Similarity=0.188 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCC-----ccccCC-C-CCcc
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNN-----VACHGI-P-DSRP 100 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~-----~~~h~~-p-~~~~ 100 (309)
..|++.+++.+++.++++.++||++-.+|...+++.+.+.|..... . | ..-.+|.+- ..+++. + ++.+
T Consensus 118 ~~~~~~~~~~~a~~~~i~~~kpG~~~~~i~~~~~~~~~~~g~~~~~-~---~-~GHgiG~~~he~p~~i~~~~~~~~~~~ 192 (252)
T 1qxy_A 118 MKQKVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTARQNDLKVIK-N---L-TGHGVGLSLHEAPAHVLNYFDPKDKTL 192 (252)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCTTCBTHHHHHHHHHHHHHTTCEECT-T---C-CEEECSSSSSEEEEEECSSCCTTCCCB
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEecC-C---c-cccccCcccccCCccccCCCCCCCCCC
Confidence 4567788888999999999999999999999999999998875311 1 1 111223221 112332 2 4678
Q ss_pred cCCCCeEEEeEEEEE------------------CCEEeeeEEEEEeC
Q psy9913 101 LEDGDIVNVDVTVYL------------------NGYHGDCSATFCVG 129 (309)
Q Consensus 101 l~~gd~v~iD~g~~~------------------~Gy~~d~~Rt~~vG 129 (309)
|++|.++.++-+... +++..-+..|+.|.
T Consensus 193 l~~Gmv~tiEPgi~~g~~~~~~~~~~~~~~~~~g~~g~riEdtvlVt 239 (252)
T 1qxy_A 193 LTEGMVLAIEPFISSNASFVTEGKNEWAFETSDKSFVAQIEHTVIVT 239 (252)
T ss_dssp CCTTBEEEECCEEESSCSSCEECSSSSCEECTTCCCEEEEEEEEECC
T ss_pred ccCCCEEEEecEEEcCCCceEecCCCceEEecCCCcEEEEEEEEEEC
Confidence 999999999998754 23455566788773
No 47
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei}
Probab=95.43 E-value=0.12 Score=46.75 Aligned_cols=45 Identities=16% Similarity=0.258 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhCCcee
Q psy9913 133 ASGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQNKLRV 177 (309)
Q Consensus 133 ~~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~g~~~ 177 (309)
+.+|++.+.+.++++.+++.+|||++-.||.+.+++.+.++|...
T Consensus 70 ~~mR~A~~i~~~a~~~~~~~ikpG~te~el~~~~~~~~~~~g~~~ 114 (337)
T 4fuk_A 70 QRIKTVCQLSREVLDIATAAAKPGITTDELDRIVHEATVERNMYP 114 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCc
Confidence 456788889999999999999999999999999999999988754
No 48
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus}
Probab=95.35 E-value=0.058 Score=47.62 Aligned_cols=97 Identities=8% Similarity=-0.021 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHH----HHC--CCccCCCCCCCCCceeEecCCC----ccccCC-C
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELI----INN--GAYPSPLNYKGYPKSICTSVNN----VACHGI-P 96 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~----~~~--G~~~~~~~~~~~~~~v~~g~~~----~~~h~~-p 96 (309)
..|++.+++.++..++++.++||++-.||...+++.+ .+. |..... . | +.-.+|.+- ...++. +
T Consensus 149 ~~~~~~~~v~~a~~~~i~~~kpG~~~~~i~~~~~~~~~~~~~~~~~g~~~~~-~---~-~GHgiG~~~hE~P~i~~~~~~ 223 (286)
T 3tav_A 149 SDEALSEATRLSMEAGIAAMIPGNRLTDVSHAIELGTRAAEKQFDRAFGIVD-G---Y-GGHGIGRSMHLDPFLPNEGAP 223 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHHHHHHHHTCCCEECT-T---C-CEEECSSSSSEEEEECSSCCS
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCcccC-C---c-ccCcccccccCCccccCcCCC
Confidence 3567778888899999999999999999999999999 877 654210 0 1 112233221 122221 2
Q ss_pred -CCcccCCCCeEEEeEEEEEC------------------CEEeeeEEEEEeC
Q psy9913 97 -DSRPLEDGDIVNVDVTVYLN------------------GYHGDCSATFCVG 129 (309)
Q Consensus 97 -~~~~l~~gd~v~iD~g~~~~------------------Gy~~d~~Rt~~vG 129 (309)
++.+|++|.++.|+-|.... ++..-+..|+.|.
T Consensus 224 ~~~~~L~~GmV~tiEPgiy~~~~~~~~~~~~w~~~t~dg~~gvriEd~v~Vt 275 (286)
T 3tav_A 224 GKGPLLAVGSVLAIEPMLTLGTTQTRVLADDWTVVTTDGSRAAHWEHTVAVT 275 (286)
T ss_dssp SCSSBCCTTBEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECBEEEECC
T ss_pred CCCCCcCCCCEEEEcCEEEcCCCceEecCCCceEEecCCCcEEEeeeEEEEC
Confidence 46789999999999998753 3556666788874
No 49
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A
Probab=95.25 E-value=0.14 Score=47.91 Aligned_cols=96 Identities=10% Similarity=0.039 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCC--CccCCCCCCCCCce--eEecCCC-ccccC-CC-CCcc
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNG--AYPSPLNYKGYPKS--ICTSVNN-VACHG-IP-DSRP 100 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G--~~~~~~~~~~~~~~--v~~g~~~-~~~h~-~p-~~~~ 100 (309)
..|++.+++.++..++++.++||++-.+|...+++.+.+.| .... |+.. -.+|.+- ..+.+ .+ ++.+
T Consensus 307 ~~~~~y~~v~~a~~~~~~~~~pG~~~~~v~~~~~~~~~~~~~g~~~~------~~h~~GHgiGl~~he~p~~~~~~~~~~ 380 (444)
T 3cb6_A 307 EQQKNYSFLVALQKKLFEYCRDGAVIGDIYTKILGLIRAKRPDLEPN------FVRNLGAGIGIEFRESSLLVNAKNPRV 380 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSTTCBHHHHHHHHHHHHHHHCGGGGGG------BCSCCEEECSSSSCBGGGCCSTTCCCB
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhhhhhhHhh------cccccccccCccccCCccccCCCCCcc
Confidence 45777788889999999999999999999999999999885 2221 2221 2233221 11111 12 5678
Q ss_pred cCCCCeEEEeEEEE-----------ECCEEeeeEEEEEeC
Q psy9913 101 LEDGDIVNVDVTVY-----------LNGYHGDCSATFCVG 129 (309)
Q Consensus 101 l~~gd~v~iD~g~~-----------~~Gy~~d~~Rt~~vG 129 (309)
|++|.++.+.-|.. .+++..-+.-|++|.
T Consensus 381 l~~Gmv~tiEPgiy~~~~~~~~~~~~~~~gvriEd~v~vt 420 (444)
T 3cb6_A 381 LQAGMTLNLSIGFGNLINPHPKNSQSKEYALLLIDTIQIT 420 (444)
T ss_dssp CCTTCEEEEEEEEEEEECSSCCTTSCSEEEEEEEEEEECC
T ss_pred cCCCCEEEEEeccccccCcccccccCCceEEEEEEEEEEC
Confidence 99999999999986 245777888899984
No 50
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum}
Probab=95.09 E-value=0.074 Score=48.71 Aligned_cols=83 Identities=10% Similarity=0.028 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCC----ccccCC--CCCccc
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNN----VACHGI--PDSRPL 101 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~----~~~h~~--p~~~~l 101 (309)
..|++.+++.+++.++++.++||++-.||...+++.+.+.|..... .+. .-.+|..- ...|+. .++.+|
T Consensus 220 e~~~ly~~v~ea~~aai~~ikPG~~~~dI~~aa~~~i~~~G~~~~~-~~~----GHGIG~~vHE~P~i~~~~~~~~~~~L 294 (368)
T 3s6b_A 220 EGKELVETCYFSLMEAIKKCKPGMFYKNIGTLIDAYVSKKNFSVVR-SYS----GHGVGKLFHSNPTVPHFKKNKAVGIM 294 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBTHHHHHHHHHHHHTTTCEECC-SCC----EEECSSSSSEEEEECSSSSCCCCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCccc-cee----eCCCCccccCCCccccccCCCCCCEE
Confidence 3567778888899999999999999999999999999998875311 011 11223211 123332 235689
Q ss_pred CCCCeEEEeEEEEE
Q psy9913 102 EDGDIVNVDVTVYL 115 (309)
Q Consensus 102 ~~gd~v~iD~g~~~ 115 (309)
++|.++.|.-|...
T Consensus 295 ~~GMVfTIEPgiy~ 308 (368)
T 3s6b_A 295 KPGHVFTIEPMINQ 308 (368)
T ss_dssp CTTCEEEECCEEES
T ss_pred CCCCEEEEcCeEEc
Confidence 99999999988765
No 51
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=95.02 E-value=0.19 Score=45.23 Aligned_cols=97 Identities=12% Similarity=0.046 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCC----ccccCCC--CCccc
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNN----VACHGIP--DSRPL 101 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~----~~~h~~p--~~~~l 101 (309)
..|++.+++.+++.++++.++||++-.||...+++.+.+.|..... .+ +. -.+|..- ..+++.. .+.+|
T Consensus 189 ~~~~l~~~v~~a~~~ai~~~kPG~~~~dI~~~~~~~~~~~G~~~~~-~~--~G--HGIG~~~HE~P~i~~~~~~~~~~~L 263 (329)
T 2b3h_A 189 GARKLVQTTYECLMQAIDAVKPGVRYRELGNIIQKHAQANGFSVVR-SY--CG--HGIHKLFHTAPNVPHYAKNKAVGVM 263 (329)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTCBTTHHHHHHHHHHHHTTCEECC-SC--CE--EECSSSSSEEEEECCSSSCCCCCBC
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCccC-Cc--cc--CCcCcccccCCcccccccCCCCCEE
Confidence 4567778888899999999999999999999999999999875311 01 11 1223211 1233322 24689
Q ss_pred CCCCeEEEeEEEEEC-----------------C-EEeeeEEEEEeC
Q psy9913 102 EDGDIVNVDVTVYLN-----------------G-YHGDCSATFCVG 129 (309)
Q Consensus 102 ~~gd~v~iD~g~~~~-----------------G-y~~d~~Rt~~vG 129 (309)
++|.++.|.-|.... | +.+-+.-|++|.
T Consensus 264 ~~GMVftIEPgiy~~~~~~~~~~d~w~~~~~~G~~g~riEdtvlVT 309 (329)
T 2b3h_A 264 KSGHVFTIEPMICEGGWQDETWPDGWTAVTRDGKRSAQFEHTLLVT 309 (329)
T ss_dssp CTTCEEEECCEEESSCCCEEECTTSCCEEETTCCCEEECBEEEEEC
T ss_pred CCCCEEEEeCCcCcCcccccccCCCceeEeeCCeEEEEEeeEEEEc
Confidence 999999999888642 2 445566788874
No 52
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1
Probab=94.99 E-value=0.15 Score=47.10 Aligned_cols=98 Identities=12% Similarity=-0.012 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCccccC-----C-CCCccc
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVACHG-----I-PDSRPL 101 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~h~-----~-p~~~~l 101 (309)
..|++.+++.+++.++++.++||++-.||...+++.+.+.|....+. .++...+....+. .+|+ . .++.+|
T Consensus 272 ~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~~~G~~~~~~--~~~GHgiG~~~He-~~~~~g~~~~~~~~~~l 348 (402)
T 1kp0_A 272 ASLZIWZKNTAVHRRGLZLIKPGARCKDIASELNBMYRZWDLLRYRT--FGYGHSFGVLBHY-YGREAGVELREDIZTVL 348 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCGGGBC--SCSCBBCEEEETT-EECCTTCBCCTTCCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCeecC--CCcccccCCcccc-CCcccCcccCCCCCCcc
Confidence 45777788889999999999999999999999999999998754211 1111112221111 1221 1 245789
Q ss_pred CCCCeEEEeEEEEEC----C-EEeeeEEEEEe
Q psy9913 102 EDGDIVNVDVTVYLN----G-YHGDCSATFCV 128 (309)
Q Consensus 102 ~~gd~v~iD~g~~~~----G-y~~d~~Rt~~v 128 (309)
++|.++.++-|.... | +..-+.-+++|
T Consensus 349 ~~Gmv~tiEPgiy~~~~~~~~~G~ried~v~V 380 (402)
T 1kp0_A 349 EPGMVVSMEPMVMBPEGEPGAGGYREHDILVI 380 (402)
T ss_dssp CTTCEEEECCEEEECTTSTTCEEEECBEEEEE
T ss_pred CCCcEEEECCceeecCccCCCCcEEEEEEEEE
Confidence 999999999998876 4 23334446655
No 53
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A*
Probab=94.70 E-value=0.25 Score=46.60 Aligned_cols=97 Identities=15% Similarity=0.118 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHHHHHHHh-ccCCCCHHHHHHHHHHHHHHCCC-ccCCCCCCCCCce--eEecCCC-cccc-CCC-C-Cc
Q psy9913 28 LMHESCKLARFVLDCIAEH-IKVNMTTNELDVFAHELIINNGA-YPSPLNYKGYPKS--ICTSVNN-VACH-GIP-D-SR 99 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~-i~pG~te~el~~~~~~~~~~~G~-~~~~~~~~~~~~~--v~~g~~~-~~~h-~~p-~-~~ 99 (309)
..|++.+++.++..++++. ++||++-.+|...+++.+.+.|. +.. .|+.. -.+|.+- ..+. ..+ + +.
T Consensus 314 ~~~~~~~~v~~a~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~g~~~-----~~~h~~GHgiGl~~hE~p~~~~~~~~~~ 388 (467)
T 3biq_A 314 EMANNYDFLLTLQKEIVTNILKPGRTPKEVYESVIEYIEKTKPELVP-----NFTKNIGSLIGLEFRDSNFILNVKNDYR 388 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGGG-----GBCSCCEEECSSSSCCGGGBSSTTCCSC
T ss_pred HHHHHHHHHHHHHHHHHHhCCcCCCcHHHHHHHHHHHHHHhCcchhh-----cCCCCcccccccccccCCccCCCCCCCC
Confidence 4577788888999999999 99999999999999999999862 211 12221 2233221 1121 112 4 67
Q ss_pred ccCCCCeEEEeEEEE-E-----C-CEEeeeEEEEEeC
Q psy9913 100 PLEDGDIVNVDVTVY-L-----N-GYHGDCSATFCVG 129 (309)
Q Consensus 100 ~l~~gd~v~iD~g~~-~-----~-Gy~~d~~Rt~~vG 129 (309)
+|++|.++.+.-|.. + . .+..-+.-|++|.
T Consensus 389 ~l~~Gmv~tiEPgiy~~~~~~~~g~~gvriEd~v~Vt 425 (467)
T 3biq_A 389 KIQRGDCFNISFGFNNLKDSQSANNYALQLADTVQIP 425 (467)
T ss_dssp CCCTTCEEEEEEEEEEECCSSCSSCEEEEEEEEEECC
T ss_pred ccCCCCEEEEeCeEEeeecCCCCCccEEEEEEEEEEe
Confidence 899999999999987 4 3 5777788899985
No 54
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=94.58 E-value=0.1 Score=46.32 Aligned_cols=81 Identities=16% Similarity=0.149 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecC---CC--ccccCCC-C-Cccc
Q psy9913 29 MHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSV---NN--VACHGIP-D-SRPL 101 (309)
Q Consensus 29 ~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~---~~--~~~h~~p-~-~~~l 101 (309)
.++..+++.+++.++++.++||++-.||...+++.+.+.|.... ..+.+ -.+|. .. ..+++.+ . +.+|
T Consensus 104 ~~~l~~~~~~a~~~~i~~~kpG~~~~dI~~a~~~~~~~~G~~~~-~~~~G----HgIG~l~~He~p~ip~~~~~~~~~~L 178 (295)
T 1xgs_A 104 EDELMEAAKEALNAAISVARAGVEIKELGKAIENEIRKRGFKPI-VNLSG----HKIERYKLHAGISIPNIYRPHDNYVL 178 (295)
T ss_dssp CCHHHHHHHHHHHHHHHHCSTTCBTHHHHHHHHHHHHTTTCEEC-TTCCE----EECBTTBSSCSCEECSSCCTTCCCBC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHCCCeEE-CCCcC----CCCCCcccCCCCcCCccCCCCCCCEe
Confidence 45677888999999999999999999999999999999887531 11111 12221 11 1244433 3 6789
Q ss_pred CCCCeEEEeEEEE
Q psy9913 102 EDGDIVNVDVTVY 114 (309)
Q Consensus 102 ~~gd~v~iD~g~~ 114 (309)
++|.++.|+-+..
T Consensus 179 ~~GmV~tIEP~i~ 191 (295)
T 1xgs_A 179 KEGDVFAIEPFAT 191 (295)
T ss_dssp CTTCEEEECCEEE
T ss_pred CCCCEEEEcceeE
Confidence 9999999998876
No 55
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ...
Probab=94.58 E-value=0.4 Score=44.89 Aligned_cols=101 Identities=12% Similarity=0.079 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHH----CCCcc---------CCCCCCCCCceeE--ecCCC-cc
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIIN----NGAYP---------SPLNYKGYPKSIC--TSVNN-VA 91 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~----~G~~~---------~~~~~~~~~~~v~--~g~~~-~~ 91 (309)
..|++.+++.++..++++.++||++-.||...+.+.+.+ .|... .... ..|+..++ +|.+- ..
T Consensus 285 ~~~~~y~~v~~a~~~~i~~~~pG~~~~~v~~~~~~~~~~~l~~~G~~~g~~~~~~~~~~~~-~~~~Hg~GHgiGl~~he~ 363 (440)
T 2v3z_A 285 AQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGILKGDVDELIAQNAHR-PFFMHGLSHWLGLDVHDV 363 (440)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCCHHHHHHHHHHHHHHHHHHHTSSCSCHHHHHHTTTTT-TTCCSCSCCBCSSSSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhhhhccCcccCchhhhhhhhccc-cccCCCCCCcCCcccccC
Confidence 356777888889999999999999999998887777653 34310 0000 01222111 22211 12
Q ss_pred ccCCC-CCcccCCCCeEEEeEEEEEC----------CEEeeeEEEEEeC
Q psy9913 92 CHGIP-DSRPLEDGDIVNVDVTVYLN----------GYHGDCSATFCVG 129 (309)
Q Consensus 92 ~h~~p-~~~~l~~gd~v~iD~g~~~~----------Gy~~d~~Rt~~vG 129 (309)
+++.+ ++.+|++|.++.+.-|.... ++..-+.-|+.|.
T Consensus 364 p~~~~~~~~~L~~Gmv~tiEPgiy~~~~~~~~~~~~~~GvriEd~vlVt 412 (440)
T 2v3z_A 364 GVYGQDRSRILEPGMVLTVAPGLYIAPDAEVPEQYRGIGIRIEDDIVIT 412 (440)
T ss_dssp SCCCGGGCCCCCTTCEEEECCEEEECTTCSSCGGGTTEEEECBEEEEEE
T ss_pred CCcCCCCCCccCCCCEEEECCEEEeCCccccccccceeEEEEeeEEEEC
Confidence 22322 45789999999999999876 5777788899883
No 56
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis}
Probab=94.46 E-value=0.26 Score=46.02 Aligned_cols=100 Identities=16% Similarity=0.244 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHC----CCccCCCCC-CCCCceeEecCCCccccCCC--CCccc
Q psy9913 29 MHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINN----GAYPSPLNY-KGYPKSICTSVNNVACHGIP--DSRPL 101 (309)
Q Consensus 29 ~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~----G~~~~~~~~-~~~~~~v~~g~~~~~~h~~p--~~~~l 101 (309)
.|++.+++.++..++++.++||++-.||...+.+.+.+. |.......+ ..|+..++-+.. ...|-.| .+++|
T Consensus 282 ~~~~y~~vl~a~~~~i~~~kpG~~~~di~~~a~~~i~~~~~~~G~~~~~~~~~~~~~Hg~GH~iG-l~vhe~~~~~~~~L 360 (427)
T 3ig4_A 282 QKQIYNIVLNALKETTEIIKPGLKFAALNEHAKKVLAEGCKAVGLIQEDEELSKYYYHGVSHFLG-LDTHDVGTYKDRVL 360 (427)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTCBTHHHHHHHHHHHHHHHHHHTSCSSGGGGGGTCCSCSCCBCS-SSSSCCCCCTTCBC
T ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHhHhhcCCccCcchhhccCCCCCCCcCC-cCCCcCCCCCCCEe
Confidence 567778888999999999999999999998888877664 432100000 112222211110 1134333 56789
Q ss_pred CCCCeEEEeEEEEEC--CEEeeeEEEEEeC
Q psy9913 102 EDGDIVNVDVTVYLN--GYHGDCSATFCVG 129 (309)
Q Consensus 102 ~~gd~v~iD~g~~~~--Gy~~d~~Rt~~vG 129 (309)
++|.++.|.-|..+. |+..-+.-|++|.
T Consensus 361 ~~GMV~tiEPgiy~~~~g~GvriEd~vlVt 390 (427)
T 3ig4_A 361 EEGMVITIEPGLYIEEESIGIRIEDDILVT 390 (427)
T ss_dssp CTTCEEEECCEEEEGGGTEEEECBEEEEEC
T ss_pred CCCCEEEECCEEEECCCceEEEEeeEEEEe
Confidence 999999999998865 5667777899984
No 57
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=94.31 E-value=0.21 Score=45.61 Aligned_cols=42 Identities=19% Similarity=0.181 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhCCc
Q psy9913 134 SGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQNKL 175 (309)
Q Consensus 134 ~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~g~ 175 (309)
.++++-+.+.++++.+.+.+|||++-.||.+.+++.+++.|.
T Consensus 49 ~mR~A~~I~~~a~~~~~~~ikpG~te~El~~~ie~~~~~~g~ 90 (360)
T 2nw5_A 49 DARRAAEAHRRARYRVQSIVRPGITLLEIVRSIEDSTRTLLK 90 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHhcC
Confidence 456777778888899999999999999999999999888753
No 58
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1
Probab=94.17 E-value=0.31 Score=44.98 Aligned_cols=98 Identities=15% Similarity=0.066 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCccccC-----C-CCCccc
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNVACHG-----I-PDSRPL 101 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~h~-----~-p~~~~l 101 (309)
..|++.+++.+++.++++.++||++-.||...+++.+.+.|....+. .++...+....+. .+|. . .++.+|
T Consensus 272 ~~~~~y~~v~~a~~~~i~~~~pG~~~~~v~~~~~~~~~~~G~~~~~~--~~~GHgiG~~~h~-~~~~~g~~~~~~~~~~L 348 (401)
T 1chm_A 272 DHLRLWQVNVEVHEAGLKLIKPGARCSDIARELNEIFLKHDVLQYRT--FGYGHSFGTLSHY-YGREAGLELREDIDTVL 348 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTCGGGBC--SCSCBBCSBEETT-EECCTTSBCCTTCCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCcccC--CCCCcccCccCCc-cccccCccccCCCCCcc
Confidence 45777888889999999999999999999999999999988743210 0111111111111 1121 1 245789
Q ss_pred CCCCeEEEeEEEEEC----C-EEeeeEEEEEe
Q psy9913 102 EDGDIVNVDVTVYLN----G-YHGDCSATFCV 128 (309)
Q Consensus 102 ~~gd~v~iD~g~~~~----G-y~~d~~Rt~~v 128 (309)
++|.++.+.-|.... | +..-+.-+++|
T Consensus 349 ~~Gmv~tiEPgiy~~~~~~g~~GvriEd~vlV 380 (401)
T 1chm_A 349 EPGMVVSMEPMIMLPEGLPGAGGYREHDILIV 380 (401)
T ss_dssp CTTCEEEECCEEEECTTSTTCEEEECBEEEEE
T ss_pred CCCCEEEEcCeeeeccccCCCCeEEEeeeEEE
Confidence 999999999998764 4 33334456655
No 59
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A
Probab=93.53 E-value=0.51 Score=43.67 Aligned_cols=83 Identities=13% Similarity=0.047 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCC--c----cccCC------
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNN--V----ACHGI------ 95 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~--~----~~h~~------ 95 (309)
..+++.+++.+++.++++.++||++-.||...+++.+.+.|..... .| ..-.+|..- . .+++.
T Consensus 145 ~~~~l~~~~~~a~~~~i~~~kPG~~~~dI~~ai~~~~~~~G~~~v~----~~-~GHGIG~~~HE~P~~i~~~~~~~~~~~ 219 (401)
T 2q8k_A 145 RKADVIKAAHLCAEAALRLVKPGNQNTQVTEAWNKVAHSFNCTPIE----GM-LSHQLKQHVIDGEKTIIQNPTDQQKKD 219 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSTTCBHHHHHHHHHHHHHTTTCEECT----TC-EEEEEBTTBSSCSCEEESSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHcCCeecC----Cc-ccccCCCccccCCcccccCCCcccccC
Confidence 3567778888999999999999999999999999999998875321 12 111233221 0 11111
Q ss_pred CCCcccCCCCeEEEeEEEEE
Q psy9913 96 PDSRPLEDGDIVNVDVTVYL 115 (309)
Q Consensus 96 p~~~~l~~gd~v~iD~g~~~ 115 (309)
..+.+|++|.++.|+-++..
T Consensus 220 ~~~~~L~~GmV~tIEP~i~~ 239 (401)
T 2q8k_A 220 HEKAEFEVHEVYAVDVLVSS 239 (401)
T ss_dssp SCCCBCCTTCEEEEEEEEES
T ss_pred CCCCEeCCCCEEEEeCceEe
Confidence 13568999999999999874
No 60
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A*
Probab=91.92 E-value=0.61 Score=44.11 Aligned_cols=89 Identities=7% Similarity=-0.001 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccC--CCCCCCCCceeEecC-----CC--ccccCCC-C
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPS--PLNYKGYPKSICTSV-----NN--VACHGIP-D 97 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~--~~~~~~~~~~v~~g~-----~~--~~~h~~p-~ 97 (309)
..+++.+++.+++.++++.++||++-.+|...+++.+.+.|.... .+.+..+...++-|. +. ..+++.+ +
T Consensus 272 e~~~L~eav~eA~~aaI~~~kPG~~~~dI~~ai~~~i~~~G~~l~g~~~~~~~v~h~~GHGIGGl~iHE~P~vP~~~~~~ 351 (478)
T 1b6a_A 272 KYDTLLKAVKDATNTGIKCAGIDVRLCDVGEAIQEVMESYEVEIDGKTYQVKPIRNLNGHSIGQYRIHAGKTVPIVKGGE 351 (478)
T ss_dssp GGHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHTCEEEETTEEEECEECTTCEEEEEBTTBSCCSCEEESSSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCcccccccceeecCcceeCCCCccccCCCccceecCCC
Confidence 567788889999999999999999999999999999999875300 000000111122222 11 1345544 4
Q ss_pred CcccCCCCeEEEeEEEEEC
Q psy9913 98 SRPLEDGDIVNVDVTVYLN 116 (309)
Q Consensus 98 ~~~l~~gd~v~iD~g~~~~ 116 (309)
+.+|++|.++.|+-++..+
T Consensus 352 ~~~Le~GMVftIEP~i~~G 370 (478)
T 1b6a_A 352 ATRMEEGEVYAIETFGSTG 370 (478)
T ss_dssp CCBCCTTCEEEEEEEEESS
T ss_pred CCEeCCCCEEEEeCeeECC
Confidence 5789999999999987643
No 61
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii}
Probab=91.10 E-value=1.5 Score=41.12 Aligned_cols=36 Identities=14% Similarity=0.254 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHH
Q psy9913 29 MHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELI 64 (309)
Q Consensus 29 ~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~ 64 (309)
.++..+++.++..++++.++||++-.||...+.+.+
T Consensus 271 ~~~ly~~vl~aq~aai~~ikPG~~~~di~~aa~~~i 306 (451)
T 3rva_A 271 FRDLIQAVDKVTLTLVDSLKPGVAYTDIHLLAHDGI 306 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence 457788999999999999999999999988776655
No 62
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114}
Probab=90.27 E-value=0.66 Score=43.84 Aligned_cols=96 Identities=13% Similarity=-0.020 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEecCCCc---cccC-----CCCCc
Q psy9913 28 LMHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTSVNNV---ACHG-----IPDSR 99 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~---~~h~-----~p~~~ 99 (309)
..|++.+++.+++.++++.++||++-.||...+++.+.+.+.... .. +.-.+|.... +.++ ..++.
T Consensus 345 ~~~~~y~~v~~a~~a~i~~ikpG~~~~di~~~ar~~i~~~~~~~~----~~--~GHGIGl~HE~P~i~~~~~~~~~~~~~ 418 (470)
T 4b28_A 345 DMIYAMQHGVEHIRTNMEMLKPGVMIPELSANTHVLDAKFQKQKY----GC--LMHGVGLCDEWPLVAYPDHAVAGAYDY 418 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHTCCCCCHHHHTTCC----SC--SEEEESSSEEEEEECCTTTCCTTSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHhhhcCC----CC--ccCCCCcCCCCCcccCccccccCCCCC
Confidence 457778888999999999999999999999887776655332210 00 1122332111 1121 12467
Q ss_pred ccCCCCeEEEeEEEEE-C-CEEeeeEEEEEeC
Q psy9913 100 PLEDGDIVNVDVTVYL-N-GYHGDCSATFCVG 129 (309)
Q Consensus 100 ~l~~gd~v~iD~g~~~-~-Gy~~d~~Rt~~vG 129 (309)
+|++|.++.+.-+... . .+..-+.-|++|.
T Consensus 419 ~L~~GMV~tiEPgiy~~~g~~GvriEd~vlVt 450 (470)
T 4b28_A 419 PLEPGMTLCVEALISEEGGDFSIKLEDQVLIT 450 (470)
T ss_dssp BCCTTCEEEEEEEEECTTCSCEEEEEEEEEEC
T ss_pred EECCCCEEEEcCeeecCCCcEEEEEeeEEEEe
Confidence 8999999999998775 3 4677788899984
No 63
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens}
Probab=89.64 E-value=0.9 Score=44.49 Aligned_cols=94 Identities=17% Similarity=0.104 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHHHHHHhccC-CCCHHHHHHHHHHHHHHCCCccCCCCCCCCCceeEec----CCCcccc-CC---CCC
Q psy9913 28 LMHESCKLARFVLDCIAEHIKV-NMTTNELDVFAHELIINNGAYPSPLNYKGYPKSICTS----VNNVACH-GI---PDS 98 (309)
Q Consensus 28 ~~r~A~~i~~~~~~~~~~~i~p-G~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g----~~~~~~h-~~---p~~ 98 (309)
..|++..++.+++.++++.++| |++-.+|...+++.+.+.|.... + .+.-.+| .+. .+. .. .++
T Consensus 439 ~~~~~y~~vl~a~~~~~~~~~p~G~~~~~id~~ar~~l~~~G~~~~----h--~~GHgvG~~l~vHE-~P~~i~~~~~~~ 511 (623)
T 3ctz_A 439 YEKECFTYVLKGHIAVSAAVFPTGTKGHLLDSFARSALWDSGLDYL----H--GTGHGVGSFLNVHE-GPCGISYKTFSD 511 (623)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEETTCBGGGGGGGGTHHHHHTTCCCS----S--CSEEBCCSSSCSSC-CSCEECTTCSCS
T ss_pred HHHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHhCCCCC----C--CccccCCCCCCCCC-CCccCCCCCCCC
Confidence 3567778888899999999999 99999999999999999887421 1 1111222 111 111 11 145
Q ss_pred cccCCCCeEEEeEEEEECC-EEeeeEEEEEe
Q psy9913 99 RPLEDGDIVNVDVTVYLNG-YHGDCSATFCV 128 (309)
Q Consensus 99 ~~l~~gd~v~iD~g~~~~G-y~~d~~Rt~~v 128 (309)
.+|++|.++.+.-|....| +..-+.-++.|
T Consensus 512 ~~L~~GMv~tiEPGiy~~g~~GiRiEd~vlV 542 (623)
T 3ctz_A 512 EPLEAGMIVTDEPGYYEDGAFGIRIENVVLV 542 (623)
T ss_dssp CBCCTTCEEEECCEEEETTTEEEECBEEEEE
T ss_pred CccCCCeEEEEeCcEEECCceEEEEeeEEEE
Confidence 6899999999999887765 44445455555
No 64
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A*
Probab=87.72 E-value=2.6 Score=40.27 Aligned_cols=36 Identities=11% Similarity=0.081 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHH
Q psy9913 29 MHESCKLARFVLDCIAEHIKVNMTTNELDVFAHELI 64 (309)
Q Consensus 29 ~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~ 64 (309)
+++..+++.++.+++++.++||++-.|+...+.+.+
T Consensus 268 ~~~ly~~vl~Aq~aai~~ikPGv~~~dI~~aa~~~i 303 (517)
T 3l24_A 268 FAELVATMKQHQIALMNQLAPGKLYGELHLDCHQRV 303 (517)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTCBHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH
Confidence 567788999999999999999999999988776654
No 65
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A
Probab=85.74 E-value=3.5 Score=39.06 Aligned_cols=42 Identities=14% Similarity=0.188 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhC-Cc
Q psy9913 134 SGKFLVNVAQQALHAAISVVKPGEYFSTIGSIIENVAKQN-KL 175 (309)
Q Consensus 134 ~~~~~~~~~~~a~~~~~~~lkpG~~~~dv~~~~~~~~~~~-g~ 175 (309)
.++++.+.+.+++..+++.++||++-.||...++..+.+. |+
T Consensus 195 ~mr~A~~i~~~a~~~~~~~i~~G~tE~el~~~~~~~~~~~~G~ 237 (494)
T 2iw2_A 195 VLRYTNKISSEAHREVMKAVKVGMKEYELESLFEHYCYSRGGM 237 (494)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHhCCC
Confidence 4467777888899999999999999999999998877654 54
No 66
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae}
Probab=84.61 E-value=3.9 Score=39.55 Aligned_cols=41 Identities=12% Similarity=0.079 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHh---------cCCCchhHHHHHHHHHHHhC
Q psy9913 133 ASGKFLVNVAQQALHAAISVV---------KPGEYFSTIGSIIENVAKQN 173 (309)
Q Consensus 133 ~~~~~~~~~~~~a~~~~~~~l---------kpG~~~~dv~~~~~~~~~~~ 173 (309)
.+++.+-+.+..+++.+++.+ +||++..||.+..++.+.+.
T Consensus 47 tKYr~AgeIa~~vLk~v~~li~~G~~~~~~kpga~I~ELCe~GD~~I~e~ 96 (614)
T 4b6a_t 47 NKYRTAGQIAQTALKYVTSLINDSYHSKTTQRQLTVPELCLLTDSFILTR 96 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCHHHHHHTTCCCBTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccCCCCcHHHHHHHHHHHHHHH
Confidence 355666666666777766654 67789999999999988875
No 67
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=26.51 E-value=22 Score=19.69 Aligned_cols=24 Identities=29% Similarity=0.166 Sum_probs=16.2
Q ss_pred eEEEEEeCCCCHHHHHHHHHHHHH
Q psy9913 122 CSATFCVGEVDASGKFLVNVAQQA 145 (309)
Q Consensus 122 ~~Rt~~vG~~~~~~~~~~~~~~~a 145 (309)
..||+.+|-.+++.+++-+.+..+
T Consensus 4 qvrtiwvggtpeelkklkeeakka 27 (36)
T 2ki0_A 4 QVRTIWVGGTPEELKKLKEEAKKA 27 (36)
T ss_dssp SCCCCCBCCCHHHHHHHHHHHHHH
T ss_pred eeEEEEecCCHHHHHHHHHHHHhc
Confidence 357888877677877776655443
No 68
>3noj_A 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloac decarboxylase; class II aldolase, A-B-B-A sandwich, metalloprotein, lyase; HET: PG4; 1.82A {Pseudomonas putida}
Probab=23.21 E-value=86 Score=26.37 Aligned_cols=65 Identities=22% Similarity=0.177 Sum_probs=43.0
Q ss_pred ccCCCCeEEEeEEEEECCEEeeeEEEEEeCCCCHHHHHHHHHHHH---HHHHHHHHhcCCCchhHHHHHHHHHHHhCCce
Q psy9913 100 PLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQ---ALHAAISVVKPGEYFSTIGSIIENVAKQNKLR 176 (309)
Q Consensus 100 ~l~~gd~v~iD~g~~~~Gy~~d~~Rt~~vG~~~~~~~~~~~~~~~---a~~~~~~~lkpG~~~~dv~~~~~~~~~~~g~~ 176 (309)
.+.+||+|.-|- +| .+++ |.+...++++.+.+ .-+..++.++.|.+..|++. +++.+++.|+.
T Consensus 163 ~V~PGD~V~aD~----dG-------Vvvi--P~~~a~eV~~~a~~~~~~E~~~~~~i~~G~~~~~~~~-~~~~l~~~g~~ 228 (238)
T 3noj_A 163 LINPGDIVVADD----DG-------VVVV--RRDECESTLVAAAERAGLEEEKRLRLAAGELGLDIYK-MRERLEAKGLR 228 (238)
T ss_dssp EECTTCEEEEET----TE-------EEEE--CGGGHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTT-CHHHHHHHTCC
T ss_pred EECCCCEEEEcC----Ce-------EEEE--cHHHHHHHHHHHHHHHHHHHHHHHHHHCcCChhhccc-hHHHHHHcCCE
Confidence 466777776543 22 4445 44555566665544 44556789999999999886 67788888876
Q ss_pred ec
Q psy9913 177 VV 178 (309)
Q Consensus 177 ~~ 178 (309)
.+
T Consensus 229 ~~ 230 (238)
T 3noj_A 229 YV 230 (238)
T ss_dssp CC
T ss_pred ee
Confidence 43
Done!