BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9914
(383 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2NL17|CLPT1_BOVIN Cleft lip and palate transmembrane protein 1 homolog OS=Bos taurus
GN=CLPTM1 PE=2 SV=1
Length = 670
Score = 217 bits (553), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 101/153 (66%), Positives = 122/153 (79%)
Query: 37 DIQFWNNRQSLEGLSVRSVFFNVFQSVVVLLYVLDNDANTLIRISCFVSVGIELWKINKV 96
DIQFWN+RQSLEGLSVRSVFF VFQS VVLLY+LDN+ N ++++S F+ V I+LWKI KV
Sbjct: 378 DIQFWNSRQSLEGLSVRSVFFGVFQSFVVLLYILDNETNFVVQVSVFIGVLIDLWKITKV 437
Query: 97 LDISFAAGRKALGFIPIPDFKDKGSYVESSTKQYDELAFKYLSWALFPLLAGYAVYSLLY 156
+D+ K G +P P F+DK +YVESSTK YD++AF+YLSW LFPLL YAVYSLLY
Sbjct: 438 MDVRLDREHKVAGLLPRPTFQDKSTYVESSTKVYDDMAFRYLSWILFPLLGCYAVYSLLY 497
Query: 157 LEHKGWYSWVLNMLYGFLLTFGTTSLEDGDIVN 189
LEHKGWYSWVL+MLYGFLLTFG ++ +N
Sbjct: 498 LEHKGWYSWVLSMLYGFLLTFGFITMTPQLFIN 530
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 28/112 (25%)
Query: 250 DFDNSHALIWKHDNL-------------------------KLKNNGSIYLHVYFTKPVSQ 284
DF+ + AL W+ +L ++ NGSIY+HVYFTK S
Sbjct: 117 DFNATSALFWEQQDLVYGDWTSGENSDGCYEHFAELDIPQSVQQNGSIYIHVYFTK--SG 174
Query: 285 FGDTPQSLKTKLTATTTIHGVKQLNKFKRLKFQRTQNLLTGQTEASLEEIKR 336
F P+ K T+H + +NK+KR +FQ+T+NLLTG+TEA E IKR
Sbjct: 175 FHPDPRQ-KALYRRLATVHMSRMINKYKRRRFQKTKNLLTGETEADPEMIKR 225
Score = 38.9 bits (89), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 335 KRWIYKIDPTRVNEFGYSA 353
+RWIY++DPTRVNEFG S
Sbjct: 584 QRWIYRVDPTRVNEFGMSG 602
>sp|Q8VBZ3|CLPT1_MOUSE Cleft lip and palate transmembrane protein 1 homolog OS=Mus
musculus GN=Clptm1 PE=1 SV=1
Length = 664
Score = 217 bits (552), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 100/153 (65%), Positives = 121/153 (79%)
Query: 37 DIQFWNNRQSLEGLSVRSVFFNVFQSVVVLLYVLDNDANTLIRISCFVSVGIELWKINKV 96
DIQFWN+RQSLEGLSVRSVFF VFQS VVLLY+LDN+ N ++++S F+ V I+LWKI KV
Sbjct: 378 DIQFWNSRQSLEGLSVRSVFFGVFQSFVVLLYILDNETNFVVQVSVFIGVLIDLWKITKV 437
Query: 97 LDISFAAGRKALGFIPIPDFKDKGSYVESSTKQYDELAFKYLSWALFPLLAGYAVYSLLY 156
+D+ + G P P FKDK +Y+ESSTK YD++AF+YLSW LFPLL YAVYSLLY
Sbjct: 438 MDVRLDREHRVAGIFPCPTFKDKSTYIESSTKVYDDMAFRYLSWILFPLLGCYAVYSLLY 497
Query: 157 LEHKGWYSWVLNMLYGFLLTFGTTSLEDGDIVN 189
LEHKGWYSWVL+MLYGFLLTFG ++ +N
Sbjct: 498 LEHKGWYSWVLSMLYGFLLTFGFITMTPQLFIN 530
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
Query: 266 LKNNGSIYLHVYFTKPVSQFGDTPQSLKTKLTATTTIHGVKQLNKFKRLKFQRTQNLLTG 325
++ NGSIY+HVYFTK S F P+ K T+H + +NK+KR +FQ+T+NLLTG
Sbjct: 158 VQQNGSIYIHVYFTK--SGFHPDPRQ-KALYRRLATVHMSRMINKYKRRRFQKTKNLLTG 214
Query: 326 QTEASLEEIKR 336
+TEA E IKR
Sbjct: 215 ETEADPEMIKR 225
Score = 38.9 bits (89), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 335 KRWIYKIDPTRVNEFGYSA 353
+RWIY++DPTRVNEFG S
Sbjct: 584 QRWIYRVDPTRVNEFGMSG 602
>sp|O96005|CLPT1_HUMAN Cleft lip and palate transmembrane protein 1 OS=Homo sapiens
GN=CLPTM1 PE=1 SV=1
Length = 669
Score = 212 bits (540), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 99/153 (64%), Positives = 120/153 (78%)
Query: 37 DIQFWNNRQSLEGLSVRSVFFNVFQSVVVLLYVLDNDANTLIRISCFVSVGIELWKINKV 96
DIQFWN+RQSLEGLSVRSVFF VFQS VVLLY+LDN+ N ++++S F+ V I+LWKI KV
Sbjct: 378 DIQFWNSRQSLEGLSVRSVFFGVFQSFVVLLYILDNETNFVVQVSVFIGVLIDLWKITKV 437
Query: 97 LDISFAAGRKALGFIPIPDFKDKGSYVESSTKQYDELAFKYLSWALFPLLAGYAVYSLLY 156
+D+ + G P FKDK +Y+ESSTK YD++AF+YLSW LFPLL YAVYSLLY
Sbjct: 438 MDVRLDREHRVAGIFPRLSFKDKSTYIESSTKVYDDMAFRYLSWILFPLLGCYAVYSLLY 497
Query: 157 LEHKGWYSWVLNMLYGFLLTFGTTSLEDGDIVN 189
LEHKGWYSWVL+MLYGFLLTFG ++ +N
Sbjct: 498 LEHKGWYSWVLSMLYGFLLTFGFITMTPQLFIN 530
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
Query: 266 LKNNGSIYLHVYFTKPVSQFGDTPQSLKTKLTATTTIHGVKQLNKFKRLKFQRTQNLLTG 325
++ NGSIY+HVYFTK S F P+ K T+H + +NK+KR +FQ+T+NLLTG
Sbjct: 158 VQQNGSIYIHVYFTK--SGFHPDPRQ-KALYRRLATVHMSRMINKYKRRRFQKTKNLLTG 214
Query: 326 QTEASLEEIKR 336
+TEA E IKR
Sbjct: 215 ETEADPEMIKR 225
Score = 38.9 bits (89), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 335 KRWIYKIDPTRVNEFGYSA 353
+RWIY++DPTRVNEFG S
Sbjct: 584 QRWIYRVDPTRVNEFGMSG 602
>sp|Q6DEL2|CLPT1_DANRE Cleft lip and palate transmembrane protein 1 homolog OS=Danio rerio
GN=clptm1 PE=2 SV=1
Length = 631
Score = 203 bits (517), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 94/153 (61%), Positives = 119/153 (77%)
Query: 37 DIQFWNNRQSLEGLSVRSVFFNVFQSVVVLLYVLDNDANTLIRISCFVSVGIELWKINKV 96
DIQFWN+RQSLEGLSVRS+ F VFQS+VVLLY+LDN+ N ++++S F+ + I+ WKI KV
Sbjct: 376 DIQFWNSRQSLEGLSVRSIIFGVFQSLVVLLYILDNETNFVVQVSVFIGLLIDFWKITKV 435
Query: 97 LDISFAAGRKALGFIPIPDFKDKGSYVESSTKQYDELAFKYLSWALFPLLAGYAVYSLLY 156
+D+ + G +P FKDK +YVESSTK YD++AFKYLSW L+PL YAVYSLLY
Sbjct: 436 MDVRLDRENRIAGIVPRLVFKDKSTYVESSTKIYDDMAFKYLSWLLYPLFGCYAVYSLLY 495
Query: 157 LEHKGWYSWVLNMLYGFLLTFGTTSLEDGDIVN 189
+EHKGWYSWVL+MLYGFLLTFG ++ +N
Sbjct: 496 VEHKGWYSWVLSMLYGFLLTFGFITMTPQLFIN 528
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 58/112 (51%), Gaps = 28/112 (25%)
Query: 250 DFDNSHALIWKHDNL-------------------------KLKNNGSIYLHVYFTKPVSQ 284
DF+N+ L W +L +K NGSIY+H+YFTK S
Sbjct: 115 DFNNTEELFWYQQDLVYGEWTTGDSGDGCYEYYKELDLSESVKQNGSIYMHIYFTK--SG 172
Query: 285 FGDTPQSLKTKLTATTTIHGVKQLNKFKRLKFQRTQNLLTGQTEASLEEIKR 336
F P+ K + +T+H + LNK+KR KF +T+NLLTG+TEA E IKR
Sbjct: 173 FHPDPKR-KGQYRRLSTVHATRMLNKYKRRKFLKTKNLLTGETEADPEMIKR 223
Score = 41.6 bits (96), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 335 KRWIYKIDPTRVNEFGYSAAMENNAESSNAVDSNKEQQAIKSAEEKKKE 383
+RWIY++DP RVNEFG ++ ++++ +SS + + AI E +K+
Sbjct: 582 QRWIYRVDPNRVNEFG-TSGVDHSKDSSAQPAAGETPAAITEKPEGEKK 629
>sp|Q54RJ1|CNRB_DICDI CLPTM1-like membrane protein cnrB OS=Dictyostelium discoideum
GN=cnrB PE=3 SV=1
Length = 619
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 90/144 (62%), Gaps = 8/144 (5%)
Query: 37 DIQFWNNRQSLEGLSVRSVFFNVFQSVVVLLYVLDNDANTLIRISCFVSVGIELWKINKV 96
DIQFW N +S+EGLSV+++ N ++ LY+LDN+ + +I S +E WK+ K
Sbjct: 347 DIQFWKNNKSMEGLSVKTITLNCVCMGIIFLYLLDNETSYMILASSGFGFLVEFWKLGKA 406
Query: 97 LDISFAAGRKALGFIPIP---DFKDKGSYVESSTKQYDELAFKYLSWALFPLLAGYAVYS 153
+ I + +P+P +F +K Y+ S TKQYD++A KYLSW LFPL+ G ++YS
Sbjct: 407 MTIKITW----MTSLPLPKRIEFINKDEYM-SKTKQYDDMAMKYLSWLLFPLVIGTSIYS 461
Query: 154 LLYLEHKGWYSWVLNMLYGFLLTF 177
L Y EHK WYSWV++ L + TF
Sbjct: 462 LYYHEHKSWYSWVVSSLVRTVYTF 485
>sp|Q8BXA5|CLP1L_MOUSE Cleft lip and palate transmembrane protein 1-like protein OS=Mus
musculus GN=Clptm1l PE=2 SV=1
Length = 539
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 86/144 (59%), Gaps = 9/144 (6%)
Query: 37 DIQFWNNRQSLEGLSVRSVFFNVFQSVVVLLYVLDNDANTLIRISCFVSVGIELWKINKV 96
DI FW ++S+ G+S ++V + F +VV+ L++LD + L+ I V IELWK+ K
Sbjct: 309 DISFWKKKKSMIGMSTKAVLWRCFSTVVIFLFLLDEQTSLLVLIPAGVGAAIELWKVKKA 368
Query: 97 LDISFAAGRKALGFIPIPDFKDKGSYVESS--TKQYDELAFKYLSWALFPLLAGYAVYSL 154
L I+ A G P+ F G++ ES T++YD A KYLS+ L+PL G AVYSL
Sbjct: 369 LKITVAWR----GLRPVFQF---GTHSESERKTEKYDAQAMKYLSYLLYPLCVGGAVYSL 421
Query: 155 LYLEHKGWYSWVLNMLYGFLLTFG 178
L +++K WYSW++N + FG
Sbjct: 422 LNIKYKSWYSWLINSFVNGVYAFG 445
>sp|Q5R7B1|CLP1L_PONAB Cleft lip and palate transmembrane protein 1-like protein OS=Pongo
abelii GN=CLPTM1L PE=2 SV=1
Length = 538
Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 88/144 (61%), Gaps = 9/144 (6%)
Query: 37 DIQFWNNRQSLEGLSVRSVFFNVFQSVVVLLYVLDNDANTLIRISCFVSVGIELWKINKV 96
DI FW ++S+ G+S ++V + F +VV+ L++LD + L+ + V IELWK+ K
Sbjct: 308 DISFWKKKKSMIGMSTKAVLWRCFSTVVIFLFLLDEQTSLLVLVPAGVGAAIELWKVKKA 367
Query: 97 LDISFAAGRKALGFIPIPDFKDKGSYVESS--TKQYDELAFKYLSWALFPLLAGYAVYSL 154
L ++ + L +P+F + G+Y ES T++YD A KYLS+ L+PL G AVYSL
Sbjct: 368 LKMTILW--RGL----MPEF-ELGTYSESERKTEEYDTQAMKYLSYLLYPLCVGGAVYSL 420
Query: 155 LYLEHKGWYSWVLNMLYGFLLTFG 178
L +++K WYSW++N + FG
Sbjct: 421 LNIKYKSWYSWLINSFVNGVYAFG 444
>sp|Q96KA5|CLP1L_HUMAN Cleft lip and palate transmembrane protein 1-like protein OS=Homo
sapiens GN=CLPTM1L PE=1 SV=1
Length = 538
Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 88/145 (60%), Gaps = 11/145 (7%)
Query: 37 DIQFWNNRQSLEGLSVRSVFFNVFQSVVVLLYVLDNDANTLIRISCFVSVGIELWKINKV 96
DI FW ++S+ G+S ++V + F +VV+ L++LD + L+ + V IELWK+ K
Sbjct: 308 DISFWKKKKSMIGMSTKAVLWRCFSTVVIFLFLLDEQTSLLVLVPAGVGAAIELWKVKKA 367
Query: 97 LDIS-FAAGRKALGFIPIPDFKDKGSYVESS--TKQYDELAFKYLSWALFPLLAGYAVYS 153
L ++ F G +P+F+ G+Y ES T++YD A KYLS+ L+PL G AVYS
Sbjct: 368 LKMTIFWRGL-------MPEFQ-FGTYSESERKTEEYDTQAMKYLSYLLYPLCVGGAVYS 419
Query: 154 LLYLEHKGWYSWVLNMLYGFLLTFG 178
LL +++K WYSW++N + FG
Sbjct: 420 LLNIKYKSWYSWLINSFVNGVYAFG 444
>sp|Q6DHU1|CLP1L_DANRE Cleft lip and palate transmembrane protein 1-like protein OS=Danio
rerio GN=clptm1l PE=2 SV=1
Length = 538
Score = 101 bits (252), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 83/142 (58%), Gaps = 5/142 (3%)
Query: 37 DIQFWNNRQSLEGLSVRSVFFNVFQSVVVLLYVLDNDANTLIRISCFVSVGIELWKINKV 96
DI FW +++S+ G+S ++V + F ++V+ LY+LD + L+ + + IE+WK+ K
Sbjct: 308 DISFWKHKKSMVGMSSKAVLWRCFSTIVIFLYLLDEQTSLLVLVPAGIGSLIEVWKVKKA 367
Query: 97 LDISFAAGRKALGFIPIPDFKDKGSYVESSTKQYDELAFKYLSWALFPLLAGYAVYSLLY 156
I G P F K E T++YD LA KYLS+ L+PL G AVY+L++
Sbjct: 368 FKIHVIWR----GLTPTFLF-GKLDESEKRTEEYDTLAMKYLSYLLYPLCVGGAVYALVF 422
Query: 157 LEHKGWYSWVLNMLYGFLLTFG 178
+++K WYSW++N L + FG
Sbjct: 423 VKYKSWYSWIINSLVNGVYAFG 444
>sp|A2VE61|CLP1L_BOVIN Cleft lip and palate transmembrane protein 1-like protein OS=Bos
taurus GN=CLPTM1L PE=2 SV=1
Length = 538
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 83/144 (57%), Gaps = 9/144 (6%)
Query: 37 DIQFWNNRQSLEGLSVRSVFFNVFQSVVVLLYVLDNDANTLIRISCFVSVGIELWKINKV 96
DI FW ++S+ G+S ++V + F +VV+ L++LD + + + + IELWK+ K
Sbjct: 308 DISFWKKKKSMIGMSTKAVLWRCFSTVVIFLFLLDEQTSLPVLVPAGIGAAIELWKVKKA 367
Query: 97 LDISFAAGRKALGFIPIPDFKDKGSYVESS--TKQYDELAFKYLSWALFPLLAGYAVYSL 154
L ++ G P F G+Y ES T++YD A KYLS+ L+PL G A+YSL
Sbjct: 368 LKMTVIWR----GLWPTFQF---GTYSESERRTEEYDAQAMKYLSYLLYPLCIGGAIYSL 420
Query: 155 LYLEHKGWYSWVLNMLYGFLLTFG 178
L +++K WYSW++N + FG
Sbjct: 421 LNIKYKSWYSWLINSFVNGVYAFG 444
>sp|Q5ZKJ0|CLP1L_CHICK Cleft lip and palate transmembrane protein 1-like protein OS=Gallus
gallus GN=CLPTM1L PE=2 SV=1
Length = 536
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
Query: 37 DIQFWNNRQSLEGLSVRSVFFNVFQSVVVLLYVLDNDANTLIRISCFVSVGIELWKINKV 96
DI FW ++S+ G+S ++V + F +VV+ L++LD + L+ I + IELWK+ K
Sbjct: 308 DISFWKKKRSMIGMSTKAVLWRCFSTVVIFLFLLDEQTSLLVLIPAGIGAVIELWKVKKA 367
Query: 97 LDISFAAGRKALGFIPIPDFKDKGSYVESSTKQYDELAFKYLSWALFPLLAGYAVYSLLY 156
L ++ K G P F E T++YD A KYLS+ L+PL G A YSLL
Sbjct: 368 LKMTV----KWQGIRPKVQFGASND-SEKKTEEYDTQAMKYLSYLLYPLCIGGAAYSLLN 422
Query: 157 LEHKGWYSWVLNMLYGFLLTFG 178
+++K WYSW++N + FG
Sbjct: 423 VKYKSWYSWLINSFVNGVYAFG 444
>sp|Q9FV50|AMP1D_ARATH Methionine aminopeptidase 1D, chloroplastic/mitochondrial
OS=Arabidopsis thaliana GN=MAP1D PE=2 SV=1
Length = 350
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 45/65 (69%)
Query: 179 TTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGE 238
+ LEDGDI+N+DVTVYLNGYHGD SATF G VD K LV V +++L AIS+ PG
Sbjct: 185 SRPLEDGDIINIDVTVYLNGYHGDTSATFFCGNVDEKAKKLVEVTKESLDKAISICGPGV 244
Query: 239 YFSTI 243
+ I
Sbjct: 245 EYKKI 249
>sp|Q6UB28|AMP1D_HUMAN Methionine aminopeptidase 1D, mitochondrial OS=Homo sapiens
GN=METAP1D PE=1 SV=1
Length = 335
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 67/122 (54%), Gaps = 9/122 (7%)
Query: 123 VESSTKQYDELAFK-YLSWALFPLLAGYAVYSLLYLEHKGWYSWVLNMLYGFLLTFGTTS 181
V+ +T++ D L + +S +P GY + K + V N+L + +
Sbjct: 117 VDMTTEEIDALVHREIISHNAYPSPLGYGGFP------KSVCTSVNNVLCHGIPD--SRP 168
Query: 182 LEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFS 241
L+DGDI+N+DVTVY NGYHGD S TF VG VD GK LV VA++ AI+ + G FS
Sbjct: 169 LQDGDIINIDVTVYYNGYHGDTSETFLVGNVDECGKKLVEVARRCRDEAIAACRAGAPFS 228
Query: 242 TI 243
I
Sbjct: 229 VI 230
>sp|Q9CPW9|AMP1D_MOUSE Methionine aminopeptidase 1D, mitochondrial OS=Mus musculus
GN=Metap1d PE=2 SV=1
Length = 335
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 45/65 (69%)
Query: 179 TTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGE 238
+ L+DGDI+N+DVTVY NGYHGD S TF VG VD SGK LV VA++ AI+ + G
Sbjct: 166 SRPLQDGDIINIDVTVYYNGYHGDTSETFLVGNVDESGKKLVEVARRCRDEAIAACRAGA 225
Query: 239 YFSTI 243
FS I
Sbjct: 226 PFSVI 230
>sp|Q54VU7|AMP1D_DICDI Methionine aminopeptidase 1D, mitochondrial OS=Dictyostelium
discoideum GN=metap1d PE=3 SV=1
Length = 404
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 45/62 (72%)
Query: 182 LEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFS 241
LE GDIV +DVT+Y NGYHGD ATF VGE+D+S K L+ ++AL+AAI VK G F+
Sbjct: 240 LEFGDIVKIDVTLYYNGYHGDTCATFPVGEIDSSSKRLIEATEKALYAAIGEVKDGALFN 299
Query: 242 TI 243
I
Sbjct: 300 KI 301
>sp|Q4VBS4|AMP1D_DANRE Methionine aminopeptidase 1D, mitochondrial OS=Danio rerio
GN=metap1d PE=2 SV=1
Length = 338
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%)
Query: 179 TTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGE 238
+ L+DGDI+N+DVTVYL GYHGD S TF +G V+ G+ LV+VA+Q AI+ PG+
Sbjct: 169 SRPLQDGDIINIDVTVYLEGYHGDTSETFLIGSVNDQGRKLVDVARQCRDQAIAACGPGQ 228
Query: 239 YFSTI 243
I
Sbjct: 229 PLCVI 233
>sp|Q5ZIM5|AMPM1_CHICK Methionine aminopeptidase 1 OS=Gallus gallus GN=METAP1 PE=2 SV=1
Length = 385
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 182 LEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPG 237
L++GDIVNVD+TVY NGYHGD + TF VGEVD K LV + L AI VKPG
Sbjct: 211 LQEGDIVNVDITVYRNGYHGDLNETFYVGEVDEGAKRLVQTTYECLMQAIDAVKPG 266
>sp|Q9FV52|AMP1B_ARATH Methionine aminopeptidase 1B, chloroplastic OS=Arabidopsis thaliana
GN=MAP1B PE=2 SV=2
Length = 369
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 41/62 (66%)
Query: 182 LEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFS 241
L+ GDI+N+DVTVYL+GYHGD S TF GEVD K LV V ++ L I+V K G F
Sbjct: 207 LQSGDIINIDVTVYLDGYHGDTSRTFFCGEVDEGFKRLVKVTEECLERGIAVCKDGASFK 266
Query: 242 TI 243
I
Sbjct: 267 KI 268
>sp|Q9FV51|AMP1C_ARATH Methionine aminopeptidase 1C, chloroplastic/mitochondrial
OS=Arabidopsis thaliana GN=MAP1C PE=2 SV=2
Length = 344
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 42/62 (67%)
Query: 182 LEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFS 241
L++GDI+N+DV VYL+GYHGD S TF G+V+ S K LV V ++ L ISV K G F
Sbjct: 180 LQNGDIINIDVAVYLDGYHGDTSKTFLCGDVNGSLKQLVKVTEECLEKGISVCKDGASFK 239
Query: 242 TI 243
I
Sbjct: 240 QI 241
>sp|Q5I0A0|AMPM1_XENTR Methionine aminopeptidase 1 OS=Xenopus tropicalis GN=metap1 PE=2
SV=1
Length = 385
Score = 68.6 bits (166), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 182 LEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPG 237
L+DGDIVNVD+TVY +GYHGD + TF VG+VD K LV + L AI VKPG
Sbjct: 211 LQDGDIVNVDITVYRDGYHGDLNETFYVGDVDEGAKRLVETTYECLMQAIDEVKPG 266
>sp|Q7ZWV9|AMPM1_XENLA Methionine aminopeptidase 1 OS=Xenopus laevis GN=metap1 PE=2 SV=2
Length = 385
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 182 LEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPG 237
L+DGDIVNVD+TVY +GYHGD + TF VG+VD K LV + L AI VKPG
Sbjct: 211 LQDGDIVNVDITVYRDGYHGDLNETFYVGDVDEGAKRLVETTYECLMQAIDEVKPG 266
>sp|P53580|AMPM2_SYNY3 Putative methionine aminopeptidase B OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=slr0786 PE=3 SV=1
Length = 274
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%)
Query: 182 LEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFS 241
L+DGDI+N+DVT+ L GYHGD S TF VG V A+ + LV Q+++ I+ +KPG
Sbjct: 111 LKDGDIINIDVTLRLAGYHGDTSRTFLVGSVSATARKLVEATQESMMRGIAEIKPGARIG 170
Query: 242 TI 243
I
Sbjct: 171 DI 172
>sp|Q4QRK0|AMPM1_DANRE Methionine aminopeptidase 1 OS=Danio rerio GN=metap1 PE=2 SV=2
Length = 386
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 39/56 (69%)
Query: 182 LEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPG 237
L++GDI+N+D+TVY NGYHGD + TF VGEVD K LV + L AI VKPG
Sbjct: 210 LQEGDILNIDITVYHNGYHGDLNETFFVGEVDEGAKRLVQTTYECLMQAIDSVKPG 265
>sp|P0A5J3|AMPM_MYCBO Methionine aminopeptidase OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=map PE=3 SV=1
Length = 285
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 77/163 (47%), Gaps = 21/163 (12%)
Query: 87 GIELW-KINKVLDISFAAGRKALGFIPIPDFKDKGSYVES--STKQYDELAFKYL-SWAL 142
G E W + +V++ AGR A G + + G V +T + D +A +YL
Sbjct: 36 GSEPWVQTPEVIEKMRVAGRIAAGAL-----AEAGKAVAPGVTTDELDRIAHEYLVDNGA 90
Query: 143 FPLLAGYAVYSLLYLEHKGWYSWVLNMLYGFLL--TFGTTSLEDGDIVNVDVTVYLNGYH 200
+P GY KG+ L + +T + DGDIVN+DVT Y+ G H
Sbjct: 91 YPSTLGY----------KGFPKSCCTSLNEVICHGIPDSTVITDGDIVNIDVTAYIGGVH 140
Query: 201 GDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTI 243
GD +ATF G+V + LV+ ++A AI+ VKPG S I
Sbjct: 141 GDTNATFPAGDVADEHRLLVDRTREATMRAINTVKPGRALSVI 183
>sp|P0A5J2|AMPM2_MYCTU Methionine aminopeptidase 2 OS=Mycobacterium tuberculosis GN=map
PE=1 SV=1
Length = 285
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 77/163 (47%), Gaps = 21/163 (12%)
Query: 87 GIELW-KINKVLDISFAAGRKALGFIPIPDFKDKGSYVES--STKQYDELAFKYL-SWAL 142
G E W + +V++ AGR A G + + G V +T + D +A +YL
Sbjct: 36 GSEPWVQTPEVIEKMRVAGRIAAGAL-----AEAGKAVAPGVTTDELDRIAHEYLVDNGA 90
Query: 143 FPLLAGYAVYSLLYLEHKGWYSWVLNMLYGFLL--TFGTTSLEDGDIVNVDVTVYLNGYH 200
+P GY KG+ L + +T + DGDIVN+DVT Y+ G H
Sbjct: 91 YPSTLGY----------KGFPKSCCTSLNEVICHGIPDSTVITDGDIVNIDVTAYIGGVH 140
Query: 201 GDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTI 243
GD +ATF G+V + LV+ ++A AI+ VKPG S I
Sbjct: 141 GDTNATFPAGDVADEHRLLVDRTREATMRAINTVKPGRALSVI 183
>sp|Q5RBF3|AMPM1_PONAB Methionine aminopeptidase 1 OS=Pongo abelii GN=METAP1 PE=2 SV=1
Length = 386
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 39/56 (69%)
Query: 182 LEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPG 237
L++GDIVNVD+T+Y NGYHGD + TF VGEVD + LV + L AI VKPG
Sbjct: 211 LQEGDIVNVDITLYRNGYHGDLNETFFVGEVDDGARKLVQTTYECLMQAIDAVKPG 266
>sp|P53582|AMPM1_HUMAN Methionine aminopeptidase 1 OS=Homo sapiens GN=METAP1 PE=1 SV=2
Length = 386
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 39/56 (69%)
Query: 182 LEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPG 237
L++GDIVNVD+T+Y NGYHGD + TF VGEVD + LV + L AI VKPG
Sbjct: 211 LQEGDIVNVDITLYRNGYHGDLNETFFVGEVDDGARKLVQTTYECLMQAIDAVKPG 266
>sp|A6QLA4|AMPM1_BOVIN Methionine aminopeptidase 1 OS=Bos taurus GN=METAP1 PE=2 SV=1
Length = 386
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 39/56 (69%)
Query: 182 LEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPG 237
L++GDIVNVD+T+Y NGYHGD + TF VG+VD + LV + L AI VKPG
Sbjct: 211 LQEGDIVNVDITLYRNGYHGDLNETFFVGDVDEGARKLVQTTYECLMQAIDAVKPG 266
>sp|Q8BP48|AMPM1_MOUSE Methionine aminopeptidase 1 OS=Mus musculus GN=Metap1 PE=2 SV=1
Length = 386
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 39/56 (69%)
Query: 182 LEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPG 237
L++GDIVNVD+T+Y NGYHGD + TF VG+VD + LV + L AI VKPG
Sbjct: 211 LQEGDIVNVDITLYRNGYHGDLNETFFVGDVDEGARKLVQTTYECLMQAIDAVKPG 266
>sp|Q9SLN5|AMP1A_ARATH Methionine aminopeptidase 1A OS=Arabidopsis thaliana GN=MAP1A PE=2
SV=1
Length = 398
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 40/62 (64%)
Query: 182 LEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFS 241
LEDGDIVNVDVTV G HGD + T+ VG VD + + LV + L AI++VKPG F
Sbjct: 222 LEDGDIVNVDVTVCYKGCHGDLNETYFVGNVDEASRQLVKCTYECLEKAIAIVKPGVRFR 281
Query: 242 TI 243
I
Sbjct: 282 EI 283
>sp|P19994|AMPM1_BACSU Methionine aminopeptidase 1 OS=Bacillus subtilis (strain 168)
GN=map PE=1 SV=1
Length = 248
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 13/121 (10%)
Query: 126 STKQYDELAFKYLS-WALFPLLAGYAVYSLLYLEHKGWYSWVLN--MLYGFLLTFGTTSL 182
STK+ D++A +++ P GY + +G +N +++G G+ L
Sbjct: 36 STKELDQIAERFIKKQGAIPSFKGYNGF-------RGSICVSVNEELVHGIP---GSRVL 85
Query: 183 EDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFST 242
+DGDI+++D+ LNGYHGD + T+ VG + K L+ V +++L+ + KPGE S
Sbjct: 86 KDGDIISIDIGAKLNGYHGDSAWTYPVGNISDDDKKLLEVTEESLYKGLQEAKPGERLSN 145
Query: 243 I 243
I
Sbjct: 146 I 146
>sp|P53579|AMPM1_SYNY3 Putative methionine aminopeptidase A OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=slr0918 PE=3 SV=1
Length = 253
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 37/62 (59%)
Query: 182 LEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFS 241
L+ GDI+NVDVT ++GYHGDCS TF VG + LV V ++ L I VKPG
Sbjct: 89 LQAGDIINVDVTPIVDGYHGDCSRTFFVGTPSPVAEKLVKVTEECLRLGIEAVKPGGKIG 148
Query: 242 TI 243
I
Sbjct: 149 DI 150
>sp|Q54WU3|AMPM1_DICDI Methionine aminopeptidase 1 OS=Dictyostelium discoideum GN=metap1
PE=3 SV=1
Length = 367
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 181 SLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYF 240
L DGDI+NVDVT+Y G+H D + T+ +G VD GK LV A L A+++ KPG +
Sbjct: 192 PLRDGDILNVDVTLYWKGFHSDLNETYLIGNVDERGKNLVKCAYDCLELAVAMCKPGTLY 251
Query: 241 STI 243
+
Sbjct: 252 REL 254
>sp|P0AE21|AMPM_SHIFL Methionine aminopeptidase OS=Shigella flexneri GN=map PE=3 SV=1
Length = 264
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 182 LEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPG 237
L+DGDIVN+DVTV +G+HGD S F VG+ G+ L + Q++L+ A+ +VKPG
Sbjct: 88 LKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPG 143
>sp|P0AE18|AMPM_ECOLI Methionine aminopeptidase OS=Escherichia coli (strain K12) GN=map
PE=1 SV=1
Length = 264
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 182 LEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPG 237
L+DGDIVN+DVTV +G+HGD S F VG+ G+ L + Q++L+ A+ +VKPG
Sbjct: 88 LKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPG 143
>sp|P0AE19|AMPM_ECOL6 Methionine aminopeptidase OS=Escherichia coli O6:H1 (strain CFT073
/ ATCC 700928 / UPEC) GN=map PE=3 SV=1
Length = 264
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 182 LEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPG 237
L+DGDIVN+DVTV +G+HGD S F VG+ G+ L + Q++L+ A+ +VKPG
Sbjct: 88 LKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPG 143
>sp|P0AE20|AMPM_ECO57 Methionine aminopeptidase OS=Escherichia coli O157:H7 GN=map PE=3
SV=1
Length = 264
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 182 LEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPG 237
L+DGDIVN+DVTV +G+HGD S F VG+ G+ L + Q++L+ A+ +VKPG
Sbjct: 88 LKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPG 143
>sp|P0A1X6|AMPM_SALTY Methionine aminopeptidase OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=map PE=1 SV=2
Length = 264
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 182 LEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFS 241
L+DGDIVN+DVTV + +HGD S F VG+ G+ L V Q++L+ I +VKPG
Sbjct: 88 LKDGDIVNIDVTVIKDEFHGDTSKMFIVGKPTILGERLCRVTQESLYLGIKMVKPGIRLR 147
Query: 242 TI 243
TI
Sbjct: 148 TI 149
>sp|P0A1X7|AMPM_SALTI Methionine aminopeptidase OS=Salmonella typhi GN=map PE=3 SV=2
Length = 264
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 182 LEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFS 241
L+DGDIVN+DVTV + +HGD S F VG+ G+ L V Q++L+ I +VKPG
Sbjct: 88 LKDGDIVNIDVTVIKDEFHGDTSKMFIVGKPTILGERLCRVTQESLYLGIKMVKPGIRLR 147
Query: 242 TI 243
TI
Sbjct: 148 TI 149
>sp|P53581|AMPM3_SYNY3 Putative methionine aminopeptidase C OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=sll0555 PE=3 SV=1
Length = 305
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 35/62 (56%)
Query: 182 LEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFS 241
+ GD++ VD Y GYHGD T VG+V + L+ VA+ AL+A I VKPG Y
Sbjct: 138 IRSGDLLKVDTGAYFQGYHGDSCITIAVGKVSPQAQRLMEVAEGALYAGIEQVKPGNYLM 197
Query: 242 TI 243
I
Sbjct: 198 DI 199
>sp|Q9Z6Q0|AMPM_CHLPN Methionine aminopeptidase OS=Chlamydia pneumoniae GN=map PE=3 SV=1
Length = 291
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%)
Query: 181 SLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPG 237
L+DGDI+N+DV+ ++GY+GDCS +GEV K + A + L+ +I+++KPG
Sbjct: 125 PLKDGDIMNIDVSCIVDGYYGDCSRMVMIGEVPEIKKKICQAALECLNDSIAILKPG 181
>sp|Q9ZCD3|AMPM_RICPR Methionine aminopeptidase OS=Rickettsia prowazekii (strain Madrid
E) GN=map PE=1 SV=1
Length = 259
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 182 LEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFS 241
L++GDIVN+DVTV L+G++GD S + VG+V K L+ V A+ I VV+PG
Sbjct: 86 LKNGDIVNIDVTVILDGWYGDTSRMYYVGDVAIKPKRLIQVTYDAMMKGIEVVRPGAKLG 145
Query: 242 TI 243
I
Sbjct: 146 DI 147
>sp|O59730|AMPM1_SCHPO Probable methionine aminopeptidase 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=fma1 PE=1 SV=1
Length = 379
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 14/86 (16%)
Query: 181 SLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQ---ALHAAISVVKPG 237
LEDGDIVN+DV++Y NG+HGD + T+ VG+ + LV + + AL AI+ VKPG
Sbjct: 199 PLEDGDIVNIDVSLYHNGFHGDLNETYYVGDKAKANPDLVCLVENTRIALDKAIAAVKPG 258
Query: 238 EYFSTIESDRNPDFDNSHALIWKHDN 263
F +F N +I KH N
Sbjct: 259 VLFQ--------EFGN---IIEKHTN 273
>sp|Q9PL68|AMPM_CHLMU Methionine aminopeptidase OS=Chlamydia muridarum (strain MoPn /
Nigg) GN=map PE=3 SV=2
Length = 291
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 41/57 (71%)
Query: 180 TSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKP 236
T L++GDI+N+DV+ ++G++GDCS +GEV K + + +AL+AAI++++P
Sbjct: 124 TPLQNGDIMNIDVSCIVDGFYGDCSRMVMIGEVPEIKKKVCEASLEALNAAIAILEP 180
>sp|P57324|AMPM_BUCAI Methionine aminopeptidase OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=map PE=3 SV=1
Length = 264
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 38/55 (69%)
Query: 183 EDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPG 237
++GDIVN+D+ + +GYHGD S F +G+ K L VA+++L+ ++ +VKPG
Sbjct: 89 KEGDIVNIDIAIIKDGYHGDTSKMFYIGKTSILSKRLCQVARESLYLSLKLVKPG 143
>sp|Q8K9T1|AMPM_BUCAP Methionine aminopeptidase OS=Buchnera aphidicola subsp. Schizaphis
graminum (strain Sg) GN=map PE=3 SV=1
Length = 261
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%)
Query: 182 LEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPG 237
L+ GDIVN+DVT+ YH D S F VG+ + + L +AQ++L+ +++++KPG
Sbjct: 87 LKSGDIVNIDVTIIKKNYHADTSKMFLVGQTNILSQRLCKIAQESLYKSLNILKPG 142
>sp|O84859|AMPM_CHLTR Methionine aminopeptidase OS=Chlamydia trachomatis (strain
D/UW-3/Cx) GN=map PE=3 SV=1
Length = 291
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 40/56 (71%)
Query: 181 SLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKP 236
L++GDI+N+DV+ ++G++GDCS +GEV + + + +AL+AAIS+++P
Sbjct: 125 PLQNGDIMNIDVSCIVDGFYGDCSRMVMIGEVSEIKRKVCEASLEALNAAISILEP 180
>sp|P44421|AMPM_HAEIN Methionine aminopeptidase OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=map PE=3 SV=1
Length = 268
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 182 LEDGDIVNVDVTVYLNGYHGDCSATFCV-GEVDASGKFLVNVAQQALHAAISVVKP 236
L++GDIVN+DVTV +GY GD S + V GE + K LV AQ+AL+ I VKP
Sbjct: 88 LKNGDIVNIDVTVIKDGYFGDNSKMYIVGGETNIRSKKLVEAAQEALYVGIRTVKP 143
>sp|Q9Z9J4|AMPM_BACHD Methionine aminopeptidase OS=Bacillus halodurans (strain ATCC
BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=map PE=3 SV=1
Length = 248
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 13/121 (10%)
Query: 126 STKQYDELAFKYL-SWALFPLLAGYAVYSLLYLEHKGWYSWVLN--MLYGFLLTFGTTSL 182
+TK+ DE+A ++ S P GY ++ G +N +++G G L
Sbjct: 36 TTKKLDEIAETFIRSHGATPSFKGYNGFT-------GSICASVNEELVHGIP---GNRVL 85
Query: 183 EDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFST 242
++GDI++VD+ NGYHGD + T+ VG + + L++V + +L+ + K G S
Sbjct: 86 KEGDIISVDIGAKYNGYHGDSAWTYAVGNISDEDQDLLDVTETSLYKGLEQAKAGARLSD 145
Query: 243 I 243
I
Sbjct: 146 I 146
>sp|P0A079|AMPM_STAAW Methionine aminopeptidase OS=Staphylococcus aureus (strain MW2)
GN=map PE=3 SV=1
Length = 252
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 182 LEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLV-NVAQQALHAAISVVKPGEYF 240
+ +GD+VN+DV+ NGY+ D +F VGE D K V +VA A AI+ VKPG
Sbjct: 84 IREGDLVNIDVSALKNGYYADTGISFVVGESDDPMKQKVCDVATMAFENAIAKVKPGTKL 143
Query: 241 STI 243
S I
Sbjct: 144 SNI 146
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 141,517,685
Number of Sequences: 539616
Number of extensions: 5828275
Number of successful extensions: 13915
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 13794
Number of HSP's gapped (non-prelim): 143
length of query: 383
length of database: 191,569,459
effective HSP length: 119
effective length of query: 264
effective length of database: 127,355,155
effective search space: 33621760920
effective search space used: 33621760920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)