Query psy9914
Match_columns 383
No_of_seqs 451 out of 2458
Neff 6.3
Searched_HMMs 46136
Date Fri Aug 16 22:51:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9914.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/9914hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2489|consensus 100.0 2.4E-51 5.1E-56 409.8 1.1 186 10-195 312-497 (592)
2 PF05602 CLPTM1: Cleft lip and 100.0 1.7E-38 3.8E-43 325.5 5.8 142 11-156 294-438 (438)
3 COG0006 PepP Xaa-Pro aminopept 100.0 3.8E-30 8.3E-35 259.4 14.9 224 83-314 107-379 (384)
4 PRK10879 proline aminopeptidas 100.0 3.6E-28 7.8E-33 249.5 15.8 216 112-341 156-435 (438)
5 TIGR02993 ectoine_eutD ectoine 100.0 1.5E-28 3.3E-33 248.7 11.8 220 88-314 116-386 (391)
6 PRK15173 peptidase; Provisiona 100.0 4.9E-28 1.1E-32 239.5 13.0 252 41-314 26-318 (323)
7 PRK09795 aminopeptidase; Provi 99.9 7.1E-28 1.5E-32 241.2 12.5 217 88-315 90-355 (361)
8 PRK14575 putative peptidase; P 99.9 4.4E-27 9.5E-32 239.3 15.7 226 85-314 135-401 (406)
9 PRK14576 putative endopeptidas 99.9 4.8E-27 1E-31 238.9 13.6 226 85-314 134-400 (405)
10 KOG2737|consensus 99.9 5.8E-27 1.3E-31 229.1 9.1 194 142-350 209-490 (492)
11 KOG2414|consensus 99.9 8.4E-25 1.8E-29 215.9 12.3 215 115-340 214-486 (488)
12 PRK13607 proline dipeptidase; 99.9 1.6E-24 3.4E-29 222.8 12.0 127 116-247 148-301 (443)
13 PRK07281 methionine aminopepti 99.9 1.8E-24 3.9E-29 210.7 11.4 138 179-316 86-285 (286)
14 PRK12897 methionine aminopepti 99.9 5.5E-24 1.2E-28 202.8 11.3 111 177-287 80-208 (248)
15 cd01090 Creatinase Creatine am 99.9 5.5E-24 1.2E-28 200.7 11.2 133 177-309 72-227 (228)
16 PLN03158 methionine aminopepti 99.9 7.5E-23 1.6E-27 207.2 14.5 133 178-310 214-380 (396)
17 PRK12318 methionine aminopepti 99.9 3.8E-23 8.1E-28 202.0 10.3 136 178-313 122-291 (291)
18 TIGR00500 met_pdase_I methioni 99.9 1.4E-22 3.1E-27 192.3 13.9 110 177-286 79-206 (247)
19 PRK05716 methionine aminopepti 99.9 8E-22 1.7E-26 187.4 12.8 138 177-314 81-252 (252)
20 cd01087 Prolidase Prolidase. E 99.9 6.6E-22 1.4E-26 187.3 12.0 133 178-310 66-243 (243)
21 cd01086 MetAP1 Methionine Amin 99.9 8.2E-22 1.8E-26 185.8 12.5 110 177-286 71-198 (238)
22 KOG2738|consensus 99.9 2.4E-21 5.2E-26 185.0 13.8 142 140-298 172-332 (369)
23 PRK12896 methionine aminopepti 99.9 3.2E-21 6.9E-26 183.6 12.5 112 177-288 86-216 (255)
24 cd01091 CDC68-like Related to 99.8 5.6E-21 1.2E-25 182.2 10.3 106 178-284 84-207 (243)
25 cd01089 PA2G4-like Related to 99.8 8E-20 1.7E-24 172.1 13.1 129 178-309 79-227 (228)
26 cd01085 APP X-Prolyl Aminopept 99.8 2.6E-20 5.6E-25 175.5 9.0 126 179-307 76-221 (224)
27 COG0024 Map Methionine aminope 99.8 2.2E-19 4.8E-24 171.4 12.8 144 139-298 60-224 (255)
28 cd01092 APP-like Similar to Pr 99.8 3.2E-19 6.8E-24 163.8 13.3 107 178-284 67-188 (208)
29 PF00557 Peptidase_M24: Metall 99.7 6.2E-18 1.3E-22 155.7 9.1 106 178-284 67-189 (207)
30 cd01066 APP_MetAP A family inc 99.7 9.9E-18 2.2E-22 151.8 8.6 106 179-284 67-187 (207)
31 TIGR00501 met_pdase_II methion 99.7 6.4E-17 1.4E-21 158.4 10.9 101 179-282 72-190 (295)
32 PRK08671 methionine aminopepti 99.7 5.2E-17 1.1E-21 158.7 9.7 103 179-284 69-189 (291)
33 TIGR00495 crvDNA_42K 42K curve 99.7 3.3E-16 7.1E-21 158.8 14.0 109 180-288 99-236 (389)
34 cd01088 MetAP2 Methionine Amin 99.7 1.5E-16 3.2E-21 155.5 10.9 102 179-283 68-187 (291)
35 PTZ00053 methionine aminopepti 99.6 1.1E-15 2.4E-20 157.1 10.7 103 179-284 231-360 (470)
36 KOG1189|consensus 99.0 1.2E-09 2.6E-14 115.4 8.5 142 167-314 202-381 (960)
37 KOG2413|consensus 98.9 2.8E-09 6.1E-14 110.9 8.2 117 166-282 363-514 (606)
38 COG5406 Nucleosome binding fac 98.4 6.1E-07 1.3E-11 93.8 8.8 132 179-314 264-421 (1001)
39 KOG2776|consensus 98.0 1.7E-05 3.6E-10 78.7 7.3 69 179-247 100-173 (398)
40 KOG2489|consensus 98.0 3.2E-06 7E-11 86.6 2.3 69 265-337 123-192 (592)
41 PF05602 CLPTM1: Cleft lip and 97.3 0.00016 3.4E-09 75.0 3.0 68 266-337 106-173 (438)
42 KOG2775|consensus 95.7 0.041 8.9E-07 54.1 8.1 66 180-248 159-224 (397)
43 PLN03158 methionine aminopepti 92.4 0.1 2.2E-06 53.7 3.0 87 198-284 126-231 (396)
44 PRK05716 methionine aminopepti 90.7 0.19 4.2E-06 47.5 2.9 70 214-283 12-98 (252)
45 cd01086 MetAP1 Methionine Amin 90.6 0.21 4.6E-06 46.8 3.1 70 214-283 2-88 (238)
46 PRK12896 methionine aminopepti 88.5 0.29 6.4E-06 46.4 2.3 80 204-283 5-103 (255)
47 KOG2738|consensus 85.1 0.78 1.7E-05 45.3 3.1 35 214-248 123-157 (369)
48 cd01088 MetAP2 Methionine Amin 83.3 0.93 2E-05 44.5 2.9 69 214-283 2-83 (291)
49 PF00557 Peptidase_M24: Metall 83.1 1.4 3E-05 40.2 3.8 69 214-282 1-82 (207)
50 PF01321 Creatinase_N: Creatin 79.9 1.1 2.4E-05 37.2 1.8 39 89-128 93-131 (132)
51 cd01092 APP-like Similar to Pr 73.6 3.8 8.1E-05 37.2 3.6 69 215-283 3-83 (208)
52 cd01087 Prolidase Prolidase. E 63.5 8.7 0.00019 36.1 3.9 69 214-282 2-81 (243)
53 cd01066 APP_MetAP A family inc 63.0 9.5 0.0002 33.9 3.9 67 214-284 2-83 (207)
54 PRK12897 methionine aminopepti 61.7 10 0.00022 36.0 4.1 34 215-248 12-45 (248)
55 COG0024 Map Methionine aminope 59.4 12 0.00026 36.3 4.1 67 214-283 12-99 (255)
56 PRK08671 methionine aminopepti 51.2 12 0.00027 36.6 2.7 69 214-283 3-84 (291)
57 TIGR00501 met_pdase_II methion 48.5 17 0.00036 35.8 3.2 69 214-283 6-87 (295)
58 TIGR00495 crvDNA_42K 42K curve 46.5 56 0.0012 33.6 6.8 33 214-246 20-52 (389)
59 PF00254 FKBP_C: FKBP-type pep 45.9 52 0.0011 25.8 5.2 53 178-239 1-60 (94)
60 PRK09795 aminopeptidase; Provi 40.6 37 0.00081 34.0 4.4 68 216-283 136-215 (361)
61 PRK10879 proline aminopeptidas 37.0 33 0.00073 35.6 3.5 64 215-282 181-260 (438)
62 cd01090 Creatinase Creatine am 36.1 49 0.0011 31.0 4.2 68 215-282 3-88 (228)
63 cd01089 PA2G4-like Related to 35.4 51 0.0011 30.7 4.2 32 214-245 2-33 (228)
64 TIGR00500 met_pdase_I methioni 33.1 60 0.0013 30.5 4.3 68 215-282 11-95 (247)
65 PRK12318 methionine aminopepti 29.2 73 0.0016 31.2 4.2 69 214-282 50-137 (291)
66 PRK07281 methionine aminopepti 26.1 91 0.002 30.6 4.3 69 215-283 12-101 (286)
67 PF06210 DUF1003: Protein of u 21.7 52 0.0011 27.8 1.4 15 2-16 29-43 (108)
68 COG0006 PepP Xaa-Pro aminopept 21.1 1.1E+02 0.0024 30.9 3.9 67 214-284 161-243 (384)
69 PTZ00053 methionine aminopepti 20.8 1.2E+02 0.0025 32.2 4.1 32 215-246 160-191 (470)
No 1
>KOG2489|consensus
Probab=100.00 E-value=2.4e-51 Score=409.85 Aligned_cols=186 Identities=45% Similarity=0.718 Sum_probs=182.3
Q ss_pred HHHHHHhHHhhcchhhhhhhhhhhhcccccccccCCCcccchhhHHHHhhhheeeEEEEEecCCCccEeeeeccccccce
Q psy9914 10 ILNFYQTAAIYKPAVFFNDYWNHAAIIDIQFWNNRQSLEGLSVRSVFFNVFQSVVVLLYVLDNDANTLIRISCFVSVGIE 89 (383)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~afknDi~fW~~~~~~~gls~r~~~~~~~~~~ii~lyl~d~~ts~~i~~~~~~g~~ie 89 (383)
--|.|++|+|.++|.||..|.|||||||||||++||||+|||+||++||||||+||||||+||+||+||++|+|||++||
T Consensus 312 eTN~yLL~vT~fVS~lH~vFdfLAFKNDIqFWn~rKsmeGLS~rsvl~~~F~s~IIflYllDneTs~mVlvs~gvG~~IE 391 (592)
T KOG2489|consen 312 ETNPYLLAVTIFVSILHSVFDFLAFKNDIQFWNKRKSMEGLSVRSVLWRCFSSLIIFLYLLDNETSFMVLVSVGVGLLIE 391 (592)
T ss_pred cCchhhhhHHHHHHHHHHHHHHHHhcchHHHhccccccccccHHHHHHHHHHHHhhhheeecCCccEEEEEeccceeeee
Confidence 35999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeeeeeeeccchHHhhccCCCCceeechhHHHHHHHHHHHHHHHHhccccccccchhhhhhhhhhcccCcchhhhcc
Q psy9914 90 LWKINKVLDISFAAGRKALGFIPIPDFKDKGSYVESSTKQYDELAFKYLSWALFPLLAGYAVYSLLYLEHKGWYSWVLNM 169 (383)
Q Consensus 90 ~wkvek~~~lsv~~~~~L~~~lP~~~f~D~s~lIe~lRke~DEia~kal~~~~~pl~~g~~~~sL~~~~~~GwySw~~~~ 169 (383)
+||+.|+.++++++.+...+.+|+..|.|.++++|+.||++|.+|+||++++.+|+++|+++|||+|.+|+|||||+++|
T Consensus 392 ~WKi~K~m~v~id~~g~i~gv~pRl~f~dkgsysE~~Tk~yD~~A~kYLs~~L~PL~vg~aVYSLlY~~hKsWYSWvLn~ 471 (592)
T KOG2489|consen 392 LWKIKKAMKVEIDWSGLIPGVLPRLSFSDKGSYSESKTKEYDDQAMKYLSYLLFPLLVGGAVYSLLYVEHKSWYSWVLNS 471 (592)
T ss_pred eeecceEEEEEEecccccccccccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCccCCcCCCeEEEEEeee
Q psy9914 170 LYGFLLTFGTTSLEDGDIVNVDVTVY 195 (383)
Q Consensus 170 sf~~I~a~G~~~L~~Gd~V~iDlg~~ 195 (383)
+.+++|+|||..|.||.+|+++++..
T Consensus 472 l~~~vy~FGFi~M~PQLFINYKLKSV 497 (592)
T KOG2489|consen 472 LYNGVYAFGFIFMLPQLFINYKLKSV 497 (592)
T ss_pred HHhHHHHHHHHHhChHHHhhhhhhhh
Confidence 99999999999999999999999874
No 2
>PF05602 CLPTM1: Cleft lip and palate transmembrane protein 1 (CLPTM1); InterPro: IPR008429 Clefts of the lip and/or palate (CL/P) are some of the most common birth defects. They may be categorised into syndromic or non-syndromic types, with syndromic defects having an underlying chromosomal or teratogenic cause. Around 70% of clefts are non-syndromic and individuals have no typical physical or developmental abnormalities; these clefts generally show polygenetic behaviour and complex inheritance []. Studies have identified regions on chromosomes 19 and 11 which may be involved in non-syndromic cleft lip and palates; this included a novel gene on chromosome 19, cleft lip and palate-associated transmembrane protein 1 (CLPTM1) []. The Poliovirus receptor-related 1 gene (PVRL1), which is located on chromosome 11, has also been shown to associate with non-syndromic cleft lip and palates [, ]. CLPTM1 encodes a transmembrane protein and has strong homology to two Caenorhabditis elegans genes, suggesting that CLPTM1 may belong to a new gene family []. This family also contains the Homo sapiens cisplatin resistance related protein CRR9p which is associated with CDDP-induced apoptosis [].
Probab=100.00 E-value=1.7e-38 Score=325.55 Aligned_cols=142 Identities=45% Similarity=0.748 Sum_probs=135.2
Q ss_pred HHHHHhHHhhcchhhhhhhhhhhhcccccccccCCCcccchhhHHHHhhhheeeEEEEEecCCCccEeeeecccccccee
Q psy9914 11 LNFYQTAAIYKPAVFFNDYWNHAAIIDIQFWNNRQSLEGLSVRSVFFNVFQSVVVLLYVLDNDANTLIRISCFVSVGIEL 90 (383)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~afknDi~fW~~~~~~~gls~r~~~~~~~~~~ii~lyl~d~~ts~~i~~~~~~g~~ie~ 90 (383)
-|.|+++.|...|.||..|.||||||||+|||+||||+|||+|||+||||||+||||||+||+|||||++|+|||++||.
T Consensus 294 tn~~lL~~t~~vs~lH~~f~fLAFKnDi~fW~~~k~~~GlS~rtv~~~~~~~~iIfLYL~D~~ts~lil~~~gig~~ie~ 373 (438)
T PF05602_consen 294 TNPYLLALTFVVSLLHSVFDFLAFKNDISFWRKRKSMEGLSVRTVLWNCFSQIIIFLYLLDNETSWLILVPSGIGLLIEA 373 (438)
T ss_pred CCHhhhHHHHHHHHHHHHHHHHhhhhHHHHHhccCCcccccHHHHHHHHHHHHheeeeEEeCCCcEEeehHhHhHHhHhh
Confidence 49999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeeeeeeccchHHhhccCCC-Cceeec--hhHHHHHHHHHHHHHHHHhccccccccchhhhhhhhh
Q psy9914 91 WKINKVLDISFAAGRKALGFIPI-PDFKDK--GSYVESSTKQYDELAFKYLSWALFPLLAGYAVYSLLY 156 (383)
Q Consensus 91 wkvek~~~lsv~~~~~L~~~lP~-~~f~D~--s~lIe~lRke~DEia~kal~~~~~pl~~g~~~~sL~~ 156 (383)
||+.|+.++++.+ .+.+|. +++.|. .+..|+.|+++|.+|++|++++.+|+++|+++|+|+|
T Consensus 374 WKv~K~~~~~~~~----~~~~p~~~~~~d~~~~~~~e~~T~~yD~~a~kyl~~~l~Pl~~gyaiYsL~Y 438 (438)
T PF05602_consen 374 WKVTKALKVSIDW----NGFFPYRISFKDKGKLSYEESKTKEYDAEAMKYLSYVLYPLCIGYAIYSLLY 438 (438)
T ss_pred eeeeEEEEEEEec----CCCccceeeeccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHheeC
Confidence 9999999998887 466787 899887 5677899999999999999999999999999999976
No 3
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=99.97 E-value=3.8e-30 Score=259.37 Aligned_cols=224 Identities=21% Similarity=0.267 Sum_probs=173.4
Q ss_pred cccccceeeeeeeee-eeeccchHHhhccCCCCceeechhHHHHHH--HHHHHHHH--HHhcccc-------ccccchhh
Q psy9914 83 FVSVGIELWKINKVL-DISFAAGRKALGFIPIPDFKDKGSYVESST--KQYDELAF--KYLSWAL-------FPLLAGYA 150 (383)
Q Consensus 83 ~~g~~ie~wkvek~~-~lsv~~~~~L~~~lP~~~f~D~s~lIe~lR--ke~DEia~--kal~~~~-------~pl~~g~~ 150 (383)
..+...+..+++... .+++..+..++..+|..+++|.+..++++| |+..||+. +|+...+ ..+..|.+
T Consensus 107 ~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~~lR~iKs~~EI~~ir~A~~i~~~a~~~~~~~~~~g~t 186 (384)
T COG0006 107 ELGLAGKRIGIESASIFLTLAAFERLQAALPRAELVDASDLVDRLRLIKSPAEIAKIRKAAEIADAALEAALEAIRPGMT 186 (384)
T ss_pred hccccccceEEEeccCccCHHHHHHHHhhCCCCEEeccHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCc
Confidence 445567778888833 278888899999999989999999999999 88888877 3432222 22346777
Q ss_pred hhhhh----h-hcccCcchhhhccccccccccCc-----------cCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCCh
Q psy9914 151 VYSLL----Y-LEHKGWYSWVLNMLYGFLLTFGT-----------TSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDA 214 (383)
Q Consensus 151 ~~sL~----~-~~~~GwySw~~~~sf~~I~a~G~-----------~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~ 214 (383)
+.++. + +...| +.+++|++|+++|. +.+++||+|++|+|+.|+|||||+||||++|+|++
T Consensus 187 E~ev~a~l~~~~~~~G----~~~~sf~~iv~~G~n~a~pH~~~~~~~~~~gd~vliD~G~~~~gY~sDiTRT~~~G~~~~ 262 (384)
T COG0006 187 EAEIAAELEYALRKGG----AEGPSFDTIVASGENAALPHYTPSDRKLRDGDLVLIDLGGVYNGYCSDITRTFPIGKPSD 262 (384)
T ss_pred HHHHHHHHHHHHHHcC----CCccCcCcEEeccccccCcCCCCCcccccCCCEEEEEeeeEECCccccceeEEecCCCCH
Confidence 77754 1 23334 34468899998884 78899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccC---------CCCcCC-----C--Cceeccc-CCCcCCCceeecCeE
Q psy9914 215 SGKFLVNVAQQALHAAISVVKPGEYFSTIESDRN---------PDFDNS-----H--ALIWKHD-NLKLKNNGSIYLHVY 277 (383)
Q Consensus 215 e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~---------~~F~~~-----~--~~~~h~~-gl~~~n~~~L~~GmV 277 (383)
+|+++|++|++||+++++++|||++++|||.+++ .+|.|+ + ..+|++| -+..+++.+|++|||
T Consensus 263 ~~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar~~i~~~g~~~~~~h~~GHgvG~~l~vhE~p~~~~~~~~~~L~~GMv 342 (384)
T COG0006 263 EQREIYEAVLEAQEAAIAAIRPGVTGGEVDAAARQVLEKAGYGLYFLHGTGHGVGFVLDVHEHPQYLSPGSDTTLEPGMV 342 (384)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHhcCCcccccCCccccCCCCcccCcCccccCCCCCccccCCcE
Confidence 9999999999999999999999999999999964 355543 3 3444455 356778999999999
Q ss_pred Ee-CCCCCCCCC-CCCCCCCc--eEEEEeeccccccchhhh
Q psy9914 278 FT-KPVSQFGDT-PQSLKTKL--TATTTIHGVKQLNKFKRL 314 (383)
Q Consensus 278 ~T-EPgiy~G~~-p~~~~~~~--~~~~~~~~~k~Ln~y~k~ 314 (383)
|| || |+| |+..+.+. ...+|..|++.||..+++
T Consensus 343 ~t~Ep----g~y~~g~~GirIEd~vlVte~G~e~LT~~~~~ 379 (384)
T COG0006 343 FSIEP----GIYIPGGGGVRIEDTVLVTEDGFEVLTRVPKE 379 (384)
T ss_pred EEecc----ccccCCCceEEEEEEEEEcCCCceecccCCcc
Confidence 99 99 455 55544442 334555799999966664
No 4
>PRK10879 proline aminopeptidase P II; Provisional
Probab=99.95 E-value=3.6e-28 Score=249.46 Aligned_cols=216 Identities=17% Similarity=0.226 Sum_probs=145.4
Q ss_pred CCCceeechhHHHHHH--HHHHHHHH--HHhcc-------ccccccchhhhhhhhh-----hcccCcchhhhcccccccc
Q psy9914 112 PIPDFKDKGSYVESST--KQYDELAF--KYLSW-------ALFPLLAGYAVYSLLY-----LEHKGWYSWVLNMLYGFLL 175 (383)
Q Consensus 112 P~~~f~D~s~lIe~lR--ke~DEia~--kal~~-------~~~pl~~g~~~~sL~~-----~~~~GwySw~~~~sf~~I~ 175 (383)
|..++.|.++++.++| |+.+||+. ++... +......|.+++++.. ....| +...++.+++
T Consensus 156 ~~~~~~d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~~pG~tE~ei~a~~~~~~~~~G----~~~~~~~~iv 231 (438)
T PRK10879 156 APATLTDWRPWVHEMRLFKSPEEIAVLRRAGEISALAHTRAMEKCRPGMFEYQLEGEIHHEFNRHG----ARYPSYNTIV 231 (438)
T ss_pred CcccchHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCC----CCCCCCCcEE
Confidence 4567889999999999 88888777 33221 2223456777776541 12223 1223344444
Q ss_pred ccC-----------ccCCcCCCeEEEEEeeeecCEEeceeeeEee-CCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhH
Q psy9914 176 TFG-----------TTSLEDGDIVNVDVTVYLNGYHGDCSATFCV-GEVDASGKFLVNVAQQALHAAISVVKPGEYFSTI 243 (383)
Q Consensus 176 a~G-----------~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~v-G~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di 243 (383)
++| .+.+++||+|++|+|+.++||+||+||||++ |+++++|+++|++|++||+++++++|||++++||
T Consensus 232 ~~G~na~~~H~~~~~~~l~~GDlVliD~G~~~~GY~sDitRT~~v~G~~s~~q~~~y~~vl~a~~aai~~~kpG~~~~~v 311 (438)
T PRK10879 232 GSGENGCILHYTENESEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTPAQREIYDIVLESLETSLRLYRPGTSIREV 311 (438)
T ss_pred EEcCccccccCCCCccccCCCCEEEEEeCeEECCEEEEeEEEEEECCcCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHH
Confidence 444 4789999999999999999999999999999 8999999999999999999999999999999999
Q ss_pred hhccC---------------------------CCCcCCCCceecccCC--------CcCCCceeecCeEEe-CCCCCCCC
Q psy9914 244 ESDRN---------------------------PDFDNSHALIWKHDNL--------KLKNNGSIYLHVYFT-KPVSQFGD 287 (383)
Q Consensus 244 ~~~~~---------------------------~~F~~~~~~~~h~~gl--------~~~n~~~L~~GmV~T-EPgiy~G~ 287 (383)
++++. .+|.|+ ++|..|+ ...++.+|++||||| |||+|+..
T Consensus 312 ~~~~~~~~~~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg---~GH~iGldvHd~~~~~~~~~~~L~~GmV~tvEPgiY~~~ 388 (438)
T PRK10879 312 TGEVVRIMVSGLVKLGILKGDVDQLIAENAHRPFFMHG---LSHWLGLDVHDVGVYGQDRSRILEPGMVLTVEPGLYIAP 388 (438)
T ss_pred HHHHHHHHHHHHHHhCCcCCCHHHHHHhccCccccCCC---CccccCcCcCcCCCcCCCCCCcCCCCCEEEECCEEEECC
Confidence 98753 234443 1233333 233568999999999 99887542
Q ss_pred CCCCCCCCceEEEEeeccccccchhhhhhccccCCCCCCCCCCHHHHHHHHhcC
Q psy9914 288 TPQSLKTKLTATTTIHGVKQLNKFKRLKFQRTQNLLTGQTEASLEEIKRWIYKI 341 (383)
Q Consensus 288 ~p~~~~~~~~~~~~~~~~k~Ln~y~k~k~~k~~nLL~~~~~~~~eeie~~~~~~ 341 (383)
..+. .+.|....+......|. +......||...|++.+|||++|++-
T Consensus 389 ~~~~-~~~~~~~GiRiED~VlV------T~~G~e~LT~~~pk~~~~iE~~m~~~ 435 (438)
T PRK10879 389 DADV-PEQYRGIGIRIEDDIVI------TETGNENLTASVVKKPDEIEALMAAA 435 (438)
T ss_pred CcCc-ccccCccEEEeccEEEE------CCCcCeEcCccCCCCHHHHHHHHHhh
Confidence 2100 01111111112222222 12222233446899999999999874
No 5
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=99.95 E-value=1.5e-28 Score=248.72 Aligned_cols=220 Identities=16% Similarity=0.108 Sum_probs=159.3
Q ss_pred ceeeeeeeeee--eeccchHHhhccCCCCceeechhHHHHHH--HHHHHHHH--HHhcc-------ccccccchhhhhhh
Q psy9914 88 IELWKINKVLD--ISFAAGRKALGFIPIPDFKDKGSYVESST--KQYDELAF--KYLSW-------ALFPLLAGYAVYSL 154 (383)
Q Consensus 88 ie~wkvek~~~--lsv~~~~~L~~~lP~~~f~D~s~lIe~lR--ke~DEia~--kal~~-------~~~pl~~g~~~~sL 154 (383)
....++|. +. +++..+..|++.+|.++|+|.+.+++++| |+.+||+. ++..+ +...+.+|.++.++
T Consensus 116 ~~~ig~e~-~~~~~~~~~~~~l~~~l~~~~~~d~~~~~~~lR~iKs~~EI~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei 194 (391)
T TIGR02993 116 SLTIGVEM-DNYYFSAAAFASLQKHLPNARFVDATALVNWQRAVKSETEISYMRVAARIVEKMHQRIFERIEPGMRKCDL 194 (391)
T ss_pred CCcEEEec-CCCccCHHHHHHHHHhCCCCEEEehHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHH
Confidence 34688887 43 78889999999999999999999999999 88888887 33322 22235567888765
Q ss_pred hh----hccc---CcchhhhccccccccccC-----------ccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHH
Q psy9914 155 LY----LEHK---GWYSWVLNMLYGFLLTFG-----------TTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASG 216 (383)
Q Consensus 155 ~~----~~~~---GwySw~~~~sf~~I~a~G-----------~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~ 216 (383)
.. .... +.. ....++.+++++| .+++++||+|++|+++.++||+||+||||++|+|++++
T Consensus 195 ~~~~~~~~~~~~~~~g--~~~~~~~~iv~sG~~~a~pH~~~~~~~l~~gd~v~iD~g~~~~GY~sD~tRT~~vG~p~~~~ 272 (391)
T TIGR02993 195 VADIYDAGIRGVDGFG--GDYPAIVPLLPSGADASAPHLTWDDSPMKVGEGTFFEIAGCYKRYHCPLSRTVFLGKPTQAF 272 (391)
T ss_pred HHHHHHhhhhcccCcC--CCcCCcccccccCccccCCCCCCCCCcccCCCEEEEEeeeecccCccceeEEEEcCCCCHHH
Confidence 31 1111 110 0112233344333 57899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc-------C----C-CCce---ecc--cCCCcCCCceeecCeEEe
Q psy9914 217 KFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD-------N----S-HALI---WKH--DNLKLKNNGSIYLHVYFT 279 (383)
Q Consensus 217 ~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~-------~----~-~~~~---~h~--~gl~~~n~~~L~~GmV~T 279 (383)
+++|+++++||+++++++|||++++||++++++.+. | + |..+ ||. |.+..+++.+|++|||||
T Consensus 273 ~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~~~~~~~G~~~~h~~GhgiGl~~~~~~~e~~~~l~~~~~~~L~~GMv~t 352 (391)
T TIGR02993 273 LDAEKAVLEGMEAGLEAAKPGNTCEDIANAFFAVLKKYGIHKDSRTGYPIGLSYPPDWGERTMSLRPGDNTVLKPGMTFH 352 (391)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccCCCceeeeccCcCCCCCCccccccCCCCceecCCCEEE
Confidence 999999999999999999999999999999753222 2 2 1111 111 234456789999999999
Q ss_pred -CCCCCCCCCCCCCCCC--ceEEEEeeccccccchhhh
Q psy9914 280 -KPVSQFGDTPQSLKTK--LTATTTIHGVKQLNKFKRL 314 (383)
Q Consensus 280 -EPgiy~G~~p~~~~~~--~~~~~~~~~~k~Ln~y~k~ 314 (383)
|||+|. |+. +.+ ....+|.+|++.||+++|+
T Consensus 353 vEpgiy~---~~~-Gvried~v~VT~~G~e~Lt~~p~~ 386 (391)
T TIGR02993 353 FMTGLWM---EDW-GLEITESILITETGVECLSSVPRK 386 (391)
T ss_pred EcceeEe---CCC-CeEEeeEEEECCCcceecccCCcc
Confidence 996653 332 222 2334556899999998875
No 6
>PRK15173 peptidase; Provisional
Probab=99.95 E-value=4.9e-28 Score=239.45 Aligned_cols=252 Identities=18% Similarity=0.131 Sum_probs=175.7
Q ss_pred cccCCCcccchhhHHHHhhhheeeEEEEEecCCCccEeeeeccccccceeeeeeeeeeeeccchHHhhccCCCCceeech
Q psy9914 41 WNNRQSLEGLSVRSVFFNVFQSVVVLLYVLDNDANTLIRISCFVSVGIELWKINKVLDISFAAGRKALGFIPIPDFKDKG 120 (383)
Q Consensus 41 W~~~~~~~gls~r~~~~~~~~~~ii~lyl~d~~ts~~i~~~~~~g~~ie~wkvek~~~lsv~~~~~L~~~lP~~~f~D~s 120 (383)
|.+++--.|-.++++.- .+-+++ .-.|+.-..+|+|. +.++...+..|++.+|+++++|.+
T Consensus 26 ~~~~~~~~~~~~~~~~~-~l~~~l-----------------~~~g~~~~rigve~-~~~~~~~~~~l~~~l~~~~~~d~~ 86 (323)
T PRK15173 26 NNNKERPIGPPIESVCN-ILKDAL-----------------NDARVLNKKIAIDL-NIMSNGGKRVIDAVMPNVDFVDSS 86 (323)
T ss_pred hccccCCCCCcHHHHHH-HHHHHH-----------------HHcCccCCEEEEec-CccCHHHHHHHHhhCCCCeEEEhH
Confidence 77776666766666642 222211 11355566889998 678999999999999999999999
Q ss_pred hHHHHHH--HHHHHHHH--HHhcc-------ccccccchhhhhhhhh-----hcccC--cch-h-hh--ccccccccccC
Q psy9914 121 SYVESST--KQYDELAF--KYLSW-------ALFPLLAGYAVYSLLY-----LEHKG--WYS-W-VL--NMLYGFLLTFG 178 (383)
Q Consensus 121 ~lIe~lR--ke~DEia~--kal~~-------~~~pl~~g~~~~sL~~-----~~~~G--wyS-w-~~--~~sf~~I~a~G 178 (383)
.+++++| |+.+||+. ++..+ +...+..|.++.++.. ....| .++ + ++ +..+.+-...+
T Consensus 87 ~~i~~lR~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~~G~tE~el~a~~~~~~~~~g~~~~~~~~~i~~G~~~~~h~~~~ 166 (323)
T PRK15173 87 SIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSETHFSRFHLISVGADFSPKLIPS 166 (323)
T ss_pred HHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCCCCcEEEECCCCccCCCCC
Confidence 9999999 88888887 33222 1223446777776531 11111 111 0 00 11111112244
Q ss_pred ccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCC---------
Q psy9914 179 TTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNP--------- 249 (383)
Q Consensus 179 ~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~--------- 249 (383)
.+++++||+|++|+|+.++||+||+||||++|+|+++++++|++++++++++++++|||++++||++++++
T Consensus 167 ~~~l~~Gd~V~iD~g~~~~GY~aDitRT~~vG~p~~~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~~~~~G~~~ 246 (323)
T PRK15173 167 NTKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPN 246 (323)
T ss_pred CCccCCCCEEEEEeCccCCCEeeeeEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCcc
Confidence 68899999999999999999999999999999999999999999999999999999999999999998642
Q ss_pred CCc----CCCC---ceecccCCCcCCCceeecCeEEe-CCCCCCCCCCCCCCCC--ceEEEEeeccccccchhhh
Q psy9914 250 DFD----NSHA---LIWKHDNLKLKNNGSIYLHVYFT-KPVSQFGDTPQSLKTK--LTATTTIHGVKQLNKFKRL 314 (383)
Q Consensus 250 ~F~----~~~~---~~~h~~gl~~~n~~~L~~GmV~T-EPgiy~G~~p~~~~~~--~~~~~~~~~~k~Ln~y~k~ 314 (383)
+|. ||.+ .++++|.+...++.+|++||||| |||+|. ++..+.+ ....+|..|++.||+++++
T Consensus 247 ~~~~~~GHGiG~~lg~~E~P~i~~~~~~~Le~GMV~tiEPgiy~---~g~ggvriEDtvlVTe~G~e~LT~~p~~ 318 (323)
T PRK15173 247 YNRGHLGHGNGVFLGLEESPFVSTHATESFTSGMVLSLETPYYG---YNLGSIMIEDMILINKEGIEFLSKLPRD 318 (323)
T ss_pred ccCCCCCCcCCCCCCcCCCCCCCCCCCCccCCCCEEEECCEEEc---CCCcEEEEeeEEEEcCCcceeCCCCCcc
Confidence 332 2211 22344444556778999999999 996651 3222222 2334566899999998874
No 7
>PRK09795 aminopeptidase; Provisional
Probab=99.95 E-value=7.1e-28 Score=241.18 Aligned_cols=217 Identities=15% Similarity=0.195 Sum_probs=158.9
Q ss_pred ceeeeeeeeeeeeccchHHhhccCCCCceeechhHHHHHH--HHHHHHHH--HHhcc-------ccccccchhhhhhhhh
Q psy9914 88 IELWKINKVLDISFAAGRKALGFIPIPDFKDKGSYVESST--KQYDELAF--KYLSW-------ALFPLLAGYAVYSLLY 156 (383)
Q Consensus 88 ie~wkvek~~~lsv~~~~~L~~~lP~~~f~D~s~lIe~lR--ke~DEia~--kal~~-------~~~pl~~g~~~~sL~~ 156 (383)
+..++++. ..++...+.+|++.+ ..+++|.+ ++++| |+.+||+. ++..+ ....+.+|+++.++..
T Consensus 90 ~~~Ig~e~-~~~s~~~~~~L~~~l-~~~~~~~~--~~~lR~iKs~~Ei~~~r~a~~i~~~~~~~~~~~i~~G~tE~e~~~ 165 (361)
T PRK09795 90 LQTLGFEG-QQVSWETAHRWQSEL-NAKLVSAT--PDVLRQIKTPEEVEKIRLACGIADRGAEHIRRFIQAGMSEREIAA 165 (361)
T ss_pred CcEEEEec-CcccHHHHHHHHHhc-Cccccccc--HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHH
Confidence 46799998 678888888887665 35566554 68888 88888887 33322 2223556888887541
Q ss_pred -----hcccCcchhhhccccccccccCc-----------cCCcCCCeEEEEEeeeecCEEeceeeeEeeCC--CChH---
Q psy9914 157 -----LEHKGWYSWVLNMLYGFLLTFGT-----------TSLEDGDIVNVDVTVYLNGYHGDCSATFCVGE--VDAS--- 215 (383)
Q Consensus 157 -----~~~~GwySw~~~~sf~~I~a~G~-----------~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~--~s~e--- 215 (383)
+...| +...+|++++++|. +++++||+|++|+|+.++|||||+||||++|. ++++
T Consensus 166 ~~~~~~~~~G----~~~~~f~~iv~sG~~~~~ph~~~~~~~l~~gd~v~~d~g~~~~gY~sd~tRt~~~g~~~~~~~~~~ 241 (361)
T PRK09795 166 ELEWFMRQQG----AEKASFDTIVASGWRGALPHGKASDKIVAAGEFVTLDFGALYQGYCSDMTRTLLVNGEGVSAESHP 241 (361)
T ss_pred HHHHHHHHCC----CCcCCCCeEEEEeccccccCCCCCCceecCCCEEEEEeccccCCEeecceEEEEeCCcCCchhHHH
Confidence 23344 34456666776663 78999999999999999999999999999964 2333
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCChhhHhhccC---------CCCcC----C-CCceecccCCCcCCCceeecCeEEe-C
Q psy9914 216 GKFLVNVAQQALHAAISVVKPGEYFSTIESDRN---------PDFDN----S-HALIWKHDNLKLKNNGSIYLHVYFT-K 280 (383)
Q Consensus 216 ~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~---------~~F~~----~-~~~~~h~~gl~~~n~~~L~~GmV~T-E 280 (383)
++++|+++++||+++++++|||++++||+++++ ++|.| + |..+|+.|.+...++.+|++||||| |
T Consensus 242 ~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~~~~~~~g~~~~~~h~~GHgiGl~~he~p~i~~~~~~~l~~gmv~~iE 321 (361)
T PRK09795 242 LFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARRVITEAGYGDYFGHNTGHAIGIEVHEDPRFSPRDTTTLQPGMLLTVE 321 (361)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCccCCCCCCccCCccccCCCCcCCCCCCCcCCCCEEEEC
Confidence 789999999999999999999999999999964 34544 2 3334455666677889999999999 9
Q ss_pred CCCCCCCCCCCCCCCc--eEEEEeeccccccchhhhh
Q psy9914 281 PVSQFGDTPQSLKTKL--TATTTIHGVKQLNKFKRLK 315 (383)
Q Consensus 281 Pgiy~G~~p~~~~~~~--~~~~~~~~~k~Ln~y~k~k 315 (383)
||+|. |+.++.+. +..+|.+|++.||+++++-
T Consensus 322 pgiy~---~~~~gvriEd~v~vt~~G~e~Lt~~~~~l 355 (361)
T PRK09795 322 PGIYL---PGQGGVRIEDVVLVTPQGAEVLYAMPKTV 355 (361)
T ss_pred CEEEe---CCCCEEEEeeEEEECCCCcEeCcCCCceE
Confidence 95541 55433332 2345558999999988753
No 8
>PRK14575 putative peptidase; Provisional
Probab=99.95 E-value=4.4e-27 Score=239.28 Aligned_cols=226 Identities=18% Similarity=0.117 Sum_probs=164.4
Q ss_pred cccceeeeeeeeeeeeccchHHhhccCCCCceeechhHHHHHH--HHHHHHHH--HHhcc-------ccccccchhhhhh
Q psy9914 85 SVGIELWKINKVLDISFAAGRKALGFIPIPDFKDKGSYVESST--KQYDELAF--KYLSW-------ALFPLLAGYAVYS 153 (383)
Q Consensus 85 g~~ie~wkvek~~~lsv~~~~~L~~~lP~~~f~D~s~lIe~lR--ke~DEia~--kal~~-------~~~pl~~g~~~~s 153 (383)
|.--..+|+|. +.++...+..|+..+|+++++|.+.+++++| |+.+||+. ++..+ +...+.+|.++++
T Consensus 135 ~~~~~~igve~-~~~~~~~~~~l~~~lp~~~~~d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~pG~tE~e 213 (406)
T PRK14575 135 RVLNKKIAIDL-NIMSNGGKRVIDAVMPNVDFVDSSSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAE 213 (406)
T ss_pred CCcCCEEEEcc-CCCCHHHHHHHHHhCCCCeEEEcHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHH
Confidence 44456899998 6789999999999999999999999999999 88888887 33222 2223556788877
Q ss_pred hhh-----hcccCc--ch-h--h-hccccccccccCccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHH
Q psy9914 154 LLY-----LEHKGW--YS-W--V-LNMLYGFLLTFGTTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNV 222 (383)
Q Consensus 154 L~~-----~~~~Gw--yS-w--~-~~~sf~~I~a~G~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~ 222 (383)
+.. ....|. ++ + + .+....+-...+.+++++||+|++|+|+.++||+||+||||++|+|+++++++|++
T Consensus 214 laa~~~~~~~~~g~~~~~~~~~v~~G~~~~~h~~~~~~~l~~Gd~v~iD~g~~~~GY~sditRT~~vG~~~~~~~~~~~~ 293 (406)
T PRK14575 214 LTAAYKAAVMSKSETHFSRFHLISVGADFSPKLIPSNTKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQT 293 (406)
T ss_pred HHHHHHHHHHHcCCCcCCcCceEEECCCcccCCCCCCCcCCCCCEEEEEeceEECCEeeeeEEEEECCCCCHHHHHHHHH
Confidence 541 111121 11 0 0 11111122334568999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCChhhHhhccCC---------CCc----CCCC---ceecccCCCcCCCceeecCeEEe-CCCCCC
Q psy9914 223 AQQALHAAISVVKPGEYFSTIESDRNP---------DFD----NSHA---LIWKHDNLKLKNNGSIYLHVYFT-KPVSQF 285 (383)
Q Consensus 223 v~ea~~~ai~~~kPG~~~~di~~~~~~---------~F~----~~~~---~~~h~~gl~~~n~~~L~~GmV~T-EPgiy~ 285 (383)
+++||+++++++|||++++||++++++ +|. |+.+ .++++|.+..++..+|++||||| |||+|.
T Consensus 294 ~~~a~~~~~~~~rpG~~~~dv~~a~~~~~~~~G~~~~~~~~~GHGiG~~lg~~e~P~i~~~~~~~Le~GMv~tiEpgiy~ 373 (406)
T PRK14575 294 IRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGHLGHGNGVFLGLEESPFVSTHATESFTSGMVLSLETPYYG 373 (406)
T ss_pred HHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCCcccCCCCCccCCCCCCCCCCCcCCCCEEEECCeeec
Confidence 999999999999999999999998642 332 2211 23344444556788999999999 996551
Q ss_pred CCCCCCCCCC--ceEEEEeeccccccchhhh
Q psy9914 286 GDTPQSLKTK--LTATTTIHGVKQLNKFKRL 314 (383)
Q Consensus 286 G~~p~~~~~~--~~~~~~~~~~k~Ln~y~k~ 314 (383)
|+..+.+ .+..+|.+|++.||+++++
T Consensus 374 ---~g~gGvriEDtvlVT~~G~e~LT~~p~~ 401 (406)
T PRK14575 374 ---YNLGSIMIEDMILINKEGIEFLSKLPRD 401 (406)
T ss_pred ---CCCcEEEEEeEEEEcCCCcccCCCCCcc
Confidence 3322222 2335566899999998875
No 9
>PRK14576 putative endopeptidase; Provisional
Probab=99.94 E-value=4.8e-27 Score=238.91 Aligned_cols=226 Identities=15% Similarity=0.094 Sum_probs=162.7
Q ss_pred cccceeeeeeeeeeeeccchHHhhccCCCCceeechhHHHHHH--HHHHHHHH--HHhcc-------ccccccchhhhhh
Q psy9914 85 SVGIELWKINKVLDISFAAGRKALGFIPIPDFKDKGSYVESST--KQYDELAF--KYLSW-------ALFPLLAGYAVYS 153 (383)
Q Consensus 85 g~~ie~wkvek~~~lsv~~~~~L~~~lP~~~f~D~s~lIe~lR--ke~DEia~--kal~~-------~~~pl~~g~~~~s 153 (383)
|+.-..+|+|+ +.++...+..|...+|+.+++|.+.+++++| |+.+||+. ++... ....+.+|.++++
T Consensus 134 g~~~~rigve~-~~~~~~~~~~l~~~~~~~~~vd~~~~l~~lR~iKs~~EI~~~r~A~~i~~~~~~~~~~~i~pG~tE~e 212 (405)
T PRK14576 134 GVLDKTIAIEL-QAMSNGGKGVLDKVAPGLKLVDSTALFNEIRMIKSPWEIEHLRKSAEITEYGIASAAKKIRVGCTAAE 212 (405)
T ss_pred CCCCCEEEEcc-CCCCHHHHHHHHhhCCCCeEEEcHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHH
Confidence 44557889998 6788888888988899999999999999999 88888887 33222 2234556888887
Q ss_pred hhh-----hcccC--cch-hh-h--ccccccccccCccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHH
Q psy9914 154 LLY-----LEHKG--WYS-WV-L--NMLYGFLLTFGTTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNV 222 (383)
Q Consensus 154 L~~-----~~~~G--wyS-w~-~--~~sf~~I~a~G~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~ 222 (383)
+.. ....| .++ |. + +....+-...+.+++++||+|++|+|+.++||+||+||||++|+|+++++++|++
T Consensus 213 laa~~~~~~~~~g~~~~~~~~~v~~G~~~~~h~~~~~~~l~~Gd~v~~d~g~~~~GY~sd~tRT~~~G~p~~~~~~~~~~ 292 (405)
T PRK14576 213 LTAAFKAAVMSFPETNFSRFNLISVGDNFSPKIIADTTPAKVGDLIKFDCGIDVAGYGADLARTFVLGEPDKLTQQIYDT 292 (405)
T ss_pred HHHHHHHHHHHcCCCcCCCCCEEEECCcccCCCCCCCcccCCCCEEEEEeceeECCEEeeeeEEEECCCCCHHHHHHHHH
Confidence 641 11111 111 10 0 0111111234457899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCChhhHhhccCC---------CCc----CC-C--CceecccCCCcCCCceeecCeEEe-CCCCCC
Q psy9914 223 AQQALHAAISVVKPGEYFSTIESDRNP---------DFD----NS-H--ALIWKHDNLKLKNNGSIYLHVYFT-KPVSQF 285 (383)
Q Consensus 223 v~ea~~~ai~~~kPG~~~~di~~~~~~---------~F~----~~-~--~~~~h~~gl~~~n~~~L~~GmV~T-EPgiy~ 285 (383)
++++++++++++|||++++||++++.+ ++. |+ | ..+++.|.+..+++.+|++||||| ||++|
T Consensus 293 ~~~a~~a~~~~~rPG~~~~dv~~a~~~~~~~~G~~~~~~~~~GHgiG~~l~~~e~P~i~~~~~~~Le~GMv~~vEp~~y- 371 (405)
T PRK14576 293 IRTGHEHMLSMVAPGVKLKAVFDSTMAVIKTSGLPHYNRGHLGHGDGVFLGLEEVPFVSTQATETFCPGMVLSLETPYY- 371 (405)
T ss_pred HHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCCCCCCCCCcCcCCCcCCCCCCccCCCCEEEECCcee-
Confidence 999999999999999999999998542 322 22 1 122334444556789999999999 99544
Q ss_pred CCCCCCCCCC--ceEEEEeeccccccchhhh
Q psy9914 286 GDTPQSLKTK--LTATTTIHGVKQLNKFKRL 314 (383)
Q Consensus 286 G~~p~~~~~~--~~~~~~~~~~k~Ln~y~k~ 314 (383)
+ |+..+.+ .++.+|..|++.||+++++
T Consensus 372 ~--~g~ggvriEDtvlVTe~G~e~LT~~p~~ 400 (405)
T PRK14576 372 G--IGVGSIMLEDMILITDSGFEFLSKLDRD 400 (405)
T ss_pred e--cCCCEEEEeeEEEECCCccccCCCCCcc
Confidence 1 3322222 2445566899999999875
No 10
>KOG2737|consensus
Probab=99.94 E-value=5.8e-27 Score=229.09 Aligned_cols=194 Identities=21% Similarity=0.292 Sum_probs=146.5
Q ss_pred cccccchhhhhhhh--h--h--cccCcchhhhccccccccccC---------------ccCCcCCCeEEEEEeeeecCEE
Q psy9914 142 LFPLLAGYAVYSLL--Y--L--EHKGWYSWVLNMLYGFLLTFG---------------TTSLEDGDIVNVDVTVYLNGYH 200 (383)
Q Consensus 142 ~~pl~~g~~~~sL~--~--~--~~~GwySw~~~~sf~~I~a~G---------------~~~L~~Gd~V~iDlg~~~~GY~ 200 (383)
...+.+|+.++++. + | .+.| +-..+..+|.++| ++.++.||++++|+|++|++|.
T Consensus 209 M~~~~pg~~Eyq~eslF~hh~y~~GG----cRh~sYtcIc~sG~ns~vLHYgha~apNd~~iqdgd~cLfDmGaey~~ya 284 (492)
T KOG2737|consen 209 MRAVRPGMKEYQLESLFLHHSYSYGG----CRHLSYTCICASGDNSAVLHYGHAGAPNDRTIQDGDLCLFDMGAEYHFYA 284 (492)
T ss_pred HHhCCchHhHHhHHHHHHHhhhccCC----ccccccceeeecCCCcceeeccccCCCCCcccCCCCEEEEecCcceeeee
Confidence 34566788888764 1 1 1222 2334556666655 3899999999999999999999
Q ss_pred eceeeeEee-CCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccC--------------------------CCC-c
Q psy9914 201 GDCSATFCV-GEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRN--------------------------PDF-D 252 (383)
Q Consensus 201 sD~tRT~~v-G~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~--------------------------~~F-~ 252 (383)
||+|++|+. |+++++|+.+|++|+.|+.++++++|||+.+.|+|.... ..| .
T Consensus 285 SDITcsFP~nGKFTadqk~VYnaVLda~navm~a~KpGv~W~Dmh~La~kvlle~laq~gIl~gdvd~m~~ar~~~vF~P 364 (492)
T KOG2737|consen 285 SDITCSFPVNGKFTADQKLVYNAVLDASNAVMEAMKPGVWWVDMHKLAEKVLLEHLAQMGILKGDVDEMVEARLGAVFMP 364 (492)
T ss_pred cccceeccCCCccchhHHHHHHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHhcCceeccHHHHHHhccCeeecc
Confidence 999999999 999999999999999999999999999999999998731 111 1
Q ss_pred CCCCceecccCC---------------------CcCCCceeecCeEEe-CCCCCCCCC-CCCCCCCceEEEEeecccccc
Q psy9914 253 NSHALIWKHDNL---------------------KLKNNGSIYLHVYFT-KPVSQFGDT-PQSLKTKLTATTTIHGVKQLN 309 (383)
Q Consensus 253 ~~~~~~~h~~gl---------------------~~~n~~~L~~GmV~T-EPgiy~G~~-p~~~~~~~~~~~~~~~~k~Ln 309 (383)
|| .+|..|+ +++....|++|||+| ||||||... .+. ....+ ...+.||
T Consensus 365 HG---LGH~lGlDvHDvGGyp~~~~rp~~P~l~~LR~aR~L~e~MviTvEPGcYFi~~Ll~e---aladp---~~~~f~n 435 (492)
T KOG2737|consen 365 HG---LGHFLGLDVHDVGGYPEGVERPDEPGLRSLRTARHLKEGMVITVEPGCYFIDFLLDE---ALADP---ARAEFLN 435 (492)
T ss_pred cc---ccccccccccccCCCCCCCCCCCcchhhhhhhhhhhhcCcEEEecCChhHHHHHHHH---HhcCh---Hhhhhhh
Confidence 32 1222222 245667899999999 999997765 222 22222 4567777
Q ss_pred chhhhhhccc----------------cCCCCCCCCCCHHHHHHHHhcCCCCCccccc
Q psy9914 310 KFKRLKFQRT----------------QNLLTGQTEASLEEIKRWIYKIDPTRVNEFG 350 (383)
Q Consensus 310 ~y~k~k~~k~----------------~nLL~~~~~~~~eeie~~~~~~~~~~~~~~~ 350 (383)
+-.-+||+.. +||+ ..||+.||||++|++.+|+.++-+|
T Consensus 436 ~e~~~rfr~~GGVRIEdDv~vt~~G~enlt--~vprtveeIEa~ma~g~~~p~~~~~ 490 (492)
T KOG2737|consen 436 REVLQRFRGFGGVRIEDDVVVTKSGIENLT--CVPRTVEEIEACMAGGDKAPTKFSG 490 (492)
T ss_pred HHHHHHhhccCceEeeccEEEecccccccc--CCCCCHHHHHHHHhcCCCCCcccCC
Confidence 7776666654 7887 7999999999999999999888765
No 11
>KOG2414|consensus
Probab=99.92 E-value=8.4e-25 Score=215.87 Aligned_cols=215 Identities=17% Similarity=0.167 Sum_probs=158.5
Q ss_pred ceeechhHHHHHH--HHHHHHHH--HHhccccccc-------cchhhhhh----hhhh-cccCcchhhhccccccccccC
Q psy9914 115 DFKDKGSYVESST--KQYDELAF--KYLSWALFPL-------LAGYAVYS----LLYL-EHKGWYSWVLNMLYGFLLTFG 178 (383)
Q Consensus 115 ~f~D~s~lIe~lR--ke~DEia~--kal~~~~~pl-------~~g~~~~s----L~~~-~~~GwySw~~~~sf~~I~a~G 178 (383)
++...+.+++++| |+.+|++. +++.+....+ +....+.. +.|. ..+| +.-.++.++++.|
T Consensus 214 ~~~~~~~li~~lRlIKSpaEl~~Mr~a~~I~sq~~~~~m~~sr~~~~E~~l~a~~eye~r~rG----ad~~AYpPVVAgG 289 (488)
T KOG2414|consen 214 TVRPVSNLIERLRLIKSPAELELMREACNIASQTFSETMFGSRDFHNEAALSALLEYECRRRG----ADRLAYPPVVAGG 289 (488)
T ss_pred ccccHHHHHHHHHccCCHHHHHHHHHHhhhhhHHHHHHHhhccCCcchhhHhhhhhhheeecC----ccccccCCeeecC
Confidence 4667788899999 99999887 4544433311 11122222 2232 3445 6667888888888
Q ss_pred c-----------cCCcCCCeEEEEEeeeecCEEeceeeeEee-CCCChHHHHHHHHHHHHHHHHHHhcCC--CCChhhHh
Q psy9914 179 T-----------TSLEDGDIVNVDVTVYLNGYHGDCSATFCV-GEVDASGKFLVNVAQQALHAAISVVKP--GEYFSTIE 244 (383)
Q Consensus 179 ~-----------~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~v-G~~s~e~~~iy~~v~ea~~~ai~~~kP--G~~~~di~ 244 (383)
. ..|.++|+|++|.||.++||+||+||||++ |++|+.|+++|+++++.|+.+|..++| |.+..+|+
T Consensus 290 ~na~tIHY~~Nnq~l~d~emVLvDaGcelgGYvSDITRTWP~sGkFs~~Qr~LYeavL~vq~ecik~c~~~~g~sL~~l~ 369 (488)
T KOG2414|consen 290 KNANTIHYVRNNQLLKDDEMVLVDAGCELGGYVSDITRTWPISGKFSDAQRDLYEAVLQVQEECIKYCKPSNGTSLSQLF 369 (488)
T ss_pred cccceEEEeecccccCCCcEEEEecCcccCceEccceeccCCCCccCcHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHH
Confidence 5 789999999999999999999999999999 999999999999999999999999999 99999999
Q ss_pred hccC-------------CC----CcC----CCCceecccCCC------cCCCceeecCeEEe-CCCCCCCCCCCCCCCCc
Q psy9914 245 SDRN-------------PD----FDN----SHALIWKHDNLK------LKNNGSIYLHVYFT-KPVSQFGDTPQSLKTKL 296 (383)
Q Consensus 245 ~~~~-------------~~----F~~----~~~~~~h~~gl~------~~n~~~L~~GmV~T-EPgiy~G~~p~~~~~~~ 296 (383)
.... .. |.. ....+.|+.||+ +..+..|+|||||| |||+|.+-.-|+ ...+
T Consensus 370 ~~s~~Ll~~~Lk~lGI~kt~~ee~~~~~klcPHhVgHyLGmDVHD~p~v~r~~pL~pg~ViTIEPGvYIP~d~d~-P~~F 448 (488)
T KOG2414|consen 370 ERSNELLGQELKELGIRKTDREEMIQAEKLCPHHVGHYLGMDVHDCPTVSRDIPLQPGMVITIEPGVYIPEDDDP-PEEF 448 (488)
T ss_pred HHHHHHHHHHHHHhCcccchHHHHHhhhhcCCcccchhcCcccccCCCCCCCccCCCCceEEecCceecCccCCC-chHh
Confidence 8721 11 111 133567778874 56789999999999 997664433111 2234
Q ss_pred eEEEEeeccccccchhhhhhccccCCCCCCCCCCHHHHHHHHhc
Q psy9914 297 TATTTIHGVKQLNKFKRLKFQRTQNLLTGQTEASLEEIKRWIYK 340 (383)
Q Consensus 297 ~~~~~~~~~k~Ln~y~k~k~~k~~nLL~~~~~~~~eeie~~~~~ 340 (383)
+...+....+.+. ...++.+||+.+|++++|||.+|+.
T Consensus 449 rGIGiRIEDDV~i------~edg~evLT~a~pKei~~ie~l~~~ 486 (488)
T KOG2414|consen 449 RGIGIRIEDDVAI------GEDGPEVLTAACPKEIIEIERLMKQ 486 (488)
T ss_pred cCceEEeecceEe------ccCCceeehhcccCCHHHHHHHHhc
Confidence 5555555666665 4455567888999999999999975
No 12
>PRK13607 proline dipeptidase; Provisional
Probab=99.91 E-value=1.6e-24 Score=222.79 Aligned_cols=127 Identities=20% Similarity=0.248 Sum_probs=96.9
Q ss_pred eeechhHHHHHH--HHHHHHHH--HHhcc-------ccccccchhhhhhhh--hh-c-ccCcchhhhccccccccccCc-
Q psy9914 116 FKDKGSYVESST--KQYDELAF--KYLSW-------ALFPLLAGYAVYSLL--YL-E-HKGWYSWVLNMLYGFLLTFGT- 179 (383)
Q Consensus 116 f~D~s~lIe~lR--ke~DEia~--kal~~-------~~~pl~~g~~~~sL~--~~-~-~~GwySw~~~~sf~~I~a~G~- 179 (383)
..+....++++| |+.+||+. ++..+ +...+..|.+++++. +. . ..| ....++.+++++|.
T Consensus 148 ~~~l~~~l~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~tE~ei~~~~~~~~~~~----~~~~~y~~iva~G~n 223 (443)
T PRK13607 148 PKGVLDYLHYHRAYKTDYELACMREAQKIAVAGHRAAKEAFRAGMSEFDINLAYLTATGQR----DNDVPYGNIVALNEH 223 (443)
T ss_pred hHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhCCC----CcCCCCCcEEEecCc
Confidence 344556778888 88888877 33222 223355678887754 21 1 112 12345666666654
Q ss_pred -----------cCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhcc
Q psy9914 180 -----------TSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDR 247 (383)
Q Consensus 180 -----------~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~ 247 (383)
+.+++||+|++|+|+.++||+||+||||+ |+++++++++|++|++||+++++++|||++++||++++
T Consensus 224 aa~~H~~~~~~~~~~~Gd~vliD~Ga~~~GY~sDiTRTf~-g~~~~~~~~ly~~v~~aq~aai~~ikPG~~~~dv~~aa 301 (443)
T PRK13607 224 AAVLHYTKLDHQAPAEMRSFLIDAGAEYNGYAADITRTYA-AKEDNDFAALIKDVNKEQLALIATMKPGVSYVDLHIQM 301 (443)
T ss_pred ceEecCCccCCCCCCCCCEEEEEeeEEECCEEecceEEEe-cCCCHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHH
Confidence 35899999999999999999999999999 88999999999999999999999999999999999875
No 13
>PRK07281 methionine aminopeptidase; Reviewed
Probab=99.91 E-value=1.8e-24 Score=210.71 Aligned_cols=138 Identities=17% Similarity=0.188 Sum_probs=106.0
Q ss_pred ccCCcCCCeEEEEEee---------------------------eecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHHH
Q psy9914 179 TTSLEDGDIVNVDVTV---------------------------YLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAI 231 (383)
Q Consensus 179 ~~~L~~Gd~V~iDlg~---------------------------~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ai 231 (383)
.+++++||+|++|+|+ .++||++|+||||++|+++++++++|+++++||++++
T Consensus 86 ~~~l~~Gd~v~iD~g~~~~~~~y~~d~~~~~~~~~~~~~~~~~~~~gy~~D~~rT~~vG~~~~~~~~l~~~~~ea~~~ai 165 (286)
T PRK07281 86 HYILKEGDLLKVDMVLSEPLDKSIVDVSKLNFDNVEQMKKYTESYRGGLADSCWAYAVGTPSDEVKNLMDVTKEAMYRGI 165 (286)
T ss_pred CcCcCCCCEEEEEecccccccccccccccccccccccccccccccCCEEeeeEEEEECCCCCHHHHHHHHHHHHHHHHHH
Confidence 4899999999999997 4899999999999999999999999999999999999
Q ss_pred HhcCCCCChhhHhhccCCCC--------c----CC-CCceecccCCC----cCCCceeecCeEEe-CCCCCCCCC--CCC
Q psy9914 232 SVVKPGEYFSTIESDRNPDF--------D----NS-HALIWKHDNLK----LKNNGSIYLHVYFT-KPVSQFGDT--PQS 291 (383)
Q Consensus 232 ~~~kPG~~~~di~~~~~~~F--------~----~~-~~~~~h~~gl~----~~n~~~L~~GmV~T-EPgiy~G~~--p~~ 291 (383)
+++|||++++||++++++.+ . |+ +..+|+.|.+. .+++.+|++||||| |||+|+|.. ...
T Consensus 166 ~~~kpG~~~~di~~a~~~~~~~~G~~~~~~~~GHGIGl~~hE~P~i~~~~~~~~~~~Le~GMV~tiEPgiy~~~~~~~~~ 245 (286)
T PRK07281 166 EQAVVGNRIGDIGAAIQEYAESRGYGVVRDLVGHGVGPTMHEEPMVPNYGTAGRGLRLREGMVLTIEPMINTGTWEIDTD 245 (286)
T ss_pred HHhcCCCcHHHHHHHHHHHHHHcCCccCCCeeeeeCCCccCCCCcCCCcccCCCCCEECCCCEEEECCeeEcCCcceecc
Confidence 99999999999999964322 1 23 22223333331 34568999999999 999987643 111
Q ss_pred CCCCce---------------EEEEeeccccccchhhhhh
Q psy9914 292 LKTKLT---------------ATTTIHGVKQLNKFKRLKF 316 (383)
Q Consensus 292 ~~~~~~---------------~~~~~~~~k~Ln~y~k~k~ 316 (383)
.+++|+ ..+|.+|++.||++.++++
T Consensus 246 ~~~gw~~~~~~g~~gvr~EdtvlVT~~G~e~LT~~~~~~~ 285 (286)
T PRK07281 246 MKTGWAHKTLDGGLSCQYEHQFVITKDGPVILTSQGEERT 285 (286)
T ss_pred cCCCceEEecCCCcEEEeccEEEEeCCcceECCCCCcccc
Confidence 122332 2355579999998877653
No 14
>PRK12897 methionine aminopeptidase; Reviewed
Probab=99.90 E-value=5.5e-24 Score=202.78 Aligned_cols=111 Identities=24% Similarity=0.287 Sum_probs=91.8
Q ss_pred cCccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc----
Q psy9914 177 FGTTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD---- 252 (383)
Q Consensus 177 ~G~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~---- 252 (383)
+.+++|++||+|++|+|+.++||+||+||||++|+++++++++|+++++|++++++++|||++++||++++.+.+.
T Consensus 80 p~~~~l~~Gd~V~iD~g~~~~GY~sD~tRT~~vG~~s~~~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~~g~ 159 (248)
T PRK12897 80 PADVPLTEGDIVTIDMVVNLNGGLSDSAWTYRVGKVSDEAEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANEGF 159 (248)
T ss_pred CCCcccCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHcCC
Confidence 3458999999999999999999999999999999999999999999999999999999999999999998643221
Q ss_pred --------CC-CCceecccCCC----cCCCceeecCeEEe-CCCCCCCC
Q psy9914 253 --------NS-HALIWKHDNLK----LKNNGSIYLHVYFT-KPVSQFGD 287 (383)
Q Consensus 253 --------~~-~~~~~h~~gl~----~~n~~~L~~GmV~T-EPgiy~G~ 287 (383)
|+ +..+|+.|.+. .++..+|++||||| |||+|.|.
T Consensus 160 ~~~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~l~~Gmv~tiEP~~~~~~ 208 (248)
T PRK12897 160 SVARDFTGHGIGKEIHEEPAIFHFGKQGQGPELQEGMVITIEPIVNVGM 208 (248)
T ss_pred ccCCCeEECccCCcccCCCccCCCCCCCCCCCcCCCCEEEECCeEecCC
Confidence 33 22333344332 24567899999999 99988654
No 15
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=99.90 E-value=5.5e-24 Score=200.73 Aligned_cols=133 Identities=14% Similarity=0.196 Sum_probs=100.3
Q ss_pred cCccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCC-------
Q psy9914 177 FGTTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNP------- 249 (383)
Q Consensus 177 ~G~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~------- 249 (383)
++.+++++||+|++|+++.++||++|++|||++|+++++++++|+++++||+++++++|||++++||++++++
T Consensus 72 ~~~r~l~~GD~v~~d~g~~~~GY~ad~~RT~~vG~~~~~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~G~ 151 (228)
T cd01090 72 VTNRKVQRGDILSLNCFPMIAGYYTALERTLFLDEVSDAHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREHDL 151 (228)
T ss_pred CCCcccCCCCEEEEEEeEEECCEeeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCC
Confidence 3458999999999999999999999999999999999999999999999999999999999999999999643
Q ss_pred --CCcC----CCCceecccC------CCcCCCceeecCeEEe-CCCCCCCCC-CCCCCCCc--eEEEEeecccccc
Q psy9914 250 --DFDN----SHALIWKHDN------LKLKNNGSIYLHVYFT-KPVSQFGDT-PQSLKTKL--TATTTIHGVKQLN 309 (383)
Q Consensus 250 --~F~~----~~~~~~h~~g------l~~~n~~~L~~GmV~T-EPgiy~G~~-p~~~~~~~--~~~~~~~~~k~Ln 309 (383)
++.| +-.+..|..+ +...++.+|++||||| ||++|...+ |+..+.+. ...+|.+|++.||
T Consensus 152 ~~~~~~~~GHgiGl~~he~~~~~g~~~~~~~~~~Le~GMV~~iEP~i~~~~~~~g~gG~ried~v~Vt~~G~e~Lt 227 (228)
T cd01090 152 LRYRTFGYGHSFGVLSHYYGREAGLELREDIDTVLEPGMVVSMEPMIMLPEGQPGAGGYREHDILVINENGAENIT 227 (228)
T ss_pred CcccccccCcccccccccCCCccccccCCCCCCccCCCCEEEECCEEeecccCCCCcEEEeeeEEEECCCccccCc
Confidence 2222 2111122211 1234568999999999 997764322 22222221 2234457999887
No 16
>PLN03158 methionine aminopeptidase; Provisional
Probab=99.89 E-value=7.5e-23 Score=207.17 Aligned_cols=133 Identities=35% Similarity=0.483 Sum_probs=104.3
Q ss_pred CccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCC--------
Q psy9914 178 GTTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNP-------- 249 (383)
Q Consensus 178 G~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~-------- 249 (383)
..++|++||+|++|+++.++||++|++|||++|+++++++++|+++++|++++++++|||++++||++++.+
T Consensus 214 ~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~VG~~~~e~~~l~e~~~eal~~aI~~vkPGv~~~dI~~~i~~~~~~~G~~ 293 (396)
T PLN03158 214 DARKLEDGDIVNVDVTVYYKGCHGDLNETFFVGNVDEASRQLVKCTYECLEKAIAIVKPGVRYREVGEVINRHATMSGLS 293 (396)
T ss_pred CCccCCCCCEEEEEEeEEECCEEEeEEeEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCCC
Confidence 358999999999999999999999999999999999999999999999999999999999999999998642
Q ss_pred ----CCcCC-CCceecccCCC--cCC--CceeecCeEEe-CCCCCCCCC-CCCCCCCc---------------eEEEEee
Q psy9914 250 ----DFDNS-HALIWKHDNLK--LKN--NGSIYLHVYFT-KPVSQFGDT-PQSLKTKL---------------TATTTIH 303 (383)
Q Consensus 250 ----~F~~~-~~~~~h~~gl~--~~n--~~~L~~GmV~T-EPgiy~G~~-p~~~~~~~---------------~~~~~~~ 303 (383)
++-|| +..+|+.|.+. ..+ .++|++||||| |||+|.|.+ .....++| +.++|.+
T Consensus 294 ~v~~~~GHGIG~~~He~P~i~~~~~~~~~~~l~~GMVfTIEP~i~~g~~~~~~~~d~wt~~t~dG~~~aq~E~tvlVTe~ 373 (396)
T PLN03158 294 VVKSYCGHGIGELFHCAPNIPHYARNKAVGVMKAGQVFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTET 373 (396)
T ss_pred ccCCccCCccccccCCCCCCCcccCCCCCCEecCCcEEEECCeeccCcccceecCCCceEEecCCceeeEeeeEEEEeCC
Confidence 22244 44445555543 222 37999999999 999998754 11112223 2245557
Q ss_pred ccccccc
Q psy9914 304 GVKQLNK 310 (383)
Q Consensus 304 ~~k~Ln~ 310 (383)
|++.||+
T Consensus 374 G~EiLT~ 380 (396)
T PLN03158 374 GVEVLTA 380 (396)
T ss_pred cceECCC
Confidence 8888884
No 17
>PRK12318 methionine aminopeptidase; Provisional
Probab=99.89 E-value=3.8e-23 Score=201.97 Aligned_cols=136 Identities=25% Similarity=0.364 Sum_probs=102.4
Q ss_pred CccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc-----
Q psy9914 178 GTTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD----- 252 (383)
Q Consensus 178 G~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~----- 252 (383)
..+++++||+|++|+++.++||++|+||||++|+++++++++|+++++|++++++++|||++++||++++.+++.
T Consensus 122 ~~~~l~~GD~V~vD~g~~~~GY~aDitRT~~vG~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~~~G~~ 201 (291)
T PRK12318 122 NDIPLKNGDIMNIDVSCIVDGYYGDCSRMVMIGEVSEIKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCADKYGFS 201 (291)
T ss_pred CCCccCCCCEEEEEEeEEECcEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCc
Confidence 358999999999999999999999999999999999999999999999999999999999999999998643221
Q ss_pred -------CC-CCceecccCCC---cCCCceeecCeEEe-CCCCCCCCC--CCCCCCC---------------ceEEEEee
Q psy9914 253 -------NS-HALIWKHDNLK---LKNNGSIYLHVYFT-KPVSQFGDT--PQSLKTK---------------LTATTTIH 303 (383)
Q Consensus 253 -------~~-~~~~~h~~gl~---~~n~~~L~~GmV~T-EPgiy~G~~--p~~~~~~---------------~~~~~~~~ 303 (383)
|+ +..+|+.|.+. .+++.+|++||||| |||+|.+.. .....++ .+..+|.+
T Consensus 202 ~~~~~~GHgIGl~~hE~P~i~~~~~~~~~~L~~GMV~~iEP~i~~~~~~g~~~~~~~~~~~~~~g~~~~~~edtv~VTe~ 281 (291)
T PRK12318 202 VVDQFVGHGVGIKFHENPYVPHHRNSSKIPLAPGMIFTIEPMINVGKKEGVIDPINHWEARTCDNQPSAQWEHTILITET 281 (291)
T ss_pred cCCCcccCCcCccccCCCcccCcCCCCCCEeCCCCEEEECCEEEcCCCceEEecCCCcEEEecCCCeeeeeeeEEEEcCC
Confidence 22 22222233221 13457899999999 998775321 0000011 22345558
Q ss_pred ccccccchhh
Q psy9914 304 GVKQLNKFKR 313 (383)
Q Consensus 304 ~~k~Ln~y~k 313 (383)
|++.||+++|
T Consensus 282 G~e~LT~~~~ 291 (291)
T PRK12318 282 GYEILTLLDK 291 (291)
T ss_pred cceeCCCCCC
Confidence 9999998764
No 18
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=99.89 E-value=1.4e-22 Score=192.29 Aligned_cols=110 Identities=29% Similarity=0.454 Sum_probs=91.0
Q ss_pred cCccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc----
Q psy9914 177 FGTTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD---- 252 (383)
Q Consensus 177 ~G~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~---- 252 (383)
++++++++||+|++|+|+.++||+||+||||++|+++++++++|+++++|++++++++|||++++||++++++.+.
T Consensus 79 ~~~~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~g~ 158 (247)
T TIGR00500 79 PDKKVLKDGDIVNIDVGVIYDGYHGDTAKTFLVGKISPEAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAKGF 158 (247)
T ss_pred CCCcccCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCC
Confidence 4568999999999999999999999999999999999999999999999999999999999999999998643222
Q ss_pred --------CC-CCceecccCCC----cCCCceeecCeEEe-CCCCCCC
Q psy9914 253 --------NS-HALIWKHDNLK----LKNNGSIYLHVYFT-KPVSQFG 286 (383)
Q Consensus 253 --------~~-~~~~~h~~gl~----~~n~~~L~~GmV~T-EPgiy~G 286 (383)
|+ +..+|+.|.+. ..++.+|++||||| |||+|.+
T Consensus 159 ~~~~~~~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gmv~~iEp~i~~~ 206 (247)
T TIGR00500 159 SVVREYCGHGIGRKFHEEPQIPNYGKKFTNVRLKEGMVFTIEPMVNTG 206 (247)
T ss_pred EeccCccCCccCcccCCCCccCCcCcCCCCCEecCCCEEEEeeEEEcC
Confidence 22 12222223221 23578999999999 9988865
No 19
>PRK05716 methionine aminopeptidase; Validated
Probab=99.87 E-value=8e-22 Score=187.38 Aligned_cols=138 Identities=30% Similarity=0.400 Sum_probs=105.8
Q ss_pred cCccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc----
Q psy9914 177 FGTTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD---- 252 (383)
Q Consensus 177 ~G~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~---- 252 (383)
+.+++|++||+|.+|+++.++||++|++|||++|+++++++++|++++++++++++++|||++++||++++.+.+.
T Consensus 81 ~~~~~l~~Gd~v~id~g~~~~gY~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~~~~~~~~g~ 160 (252)
T PRK05716 81 PSDKVLKEGDIVNIDVTVIKDGYHGDTSRTFGVGEISPEDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEAEGF 160 (252)
T ss_pred CCCcccCCCCEEEEEEEEEECCEEEEeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCC
Confidence 4568999999999999999999999999999999999999999999999999999999999999999999643222
Q ss_pred --------CCCCce-ecccCC----CcCCCceeecCeEEe-CCCCCCCCC--------------CCCCCCC--ceEEEEe
Q psy9914 253 --------NSHALI-WKHDNL----KLKNNGSIYLHVYFT-KPVSQFGDT--------------PQSLKTK--LTATTTI 302 (383)
Q Consensus 253 --------~~~~~~-~h~~gl----~~~n~~~L~~GmV~T-EPgiy~G~~--------------p~~~~~~--~~~~~~~ 302 (383)
|+..+. |+.|.+ ...++.+|++||||| ||++|.+.. ++....+ ..+.+|.
T Consensus 161 ~~~~~~~GHgiG~~~~e~p~~~~~~~~~~~~~le~Gmv~~vEp~i~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~Vt~ 240 (252)
T PRK05716 161 SVVREYCGHGIGRKFHEEPQIPHYGAPGDGPVLKEGMVFTIEPMINAGKREVKTLKDGWTVVTKDGSLSAQYEHTVAVTE 240 (252)
T ss_pred eeecCccccccCCccCCCCccCcCCCCCCCCEecCCCEEEEccEEEcCCCceEEcCCCCEEEccCCCcEEeeeeEEEEcC
Confidence 332222 222322 234678999999999 998886422 1111111 2234556
Q ss_pred eccccccchhhh
Q psy9914 303 HGVKQLNKFKRL 314 (383)
Q Consensus 303 ~~~k~Ln~y~k~ 314 (383)
+|++.||.++++
T Consensus 241 ~G~e~Lt~~~~~ 252 (252)
T PRK05716 241 DGPEILTLRPEE 252 (252)
T ss_pred CccEEeeCCCCC
Confidence 899999988763
No 20
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=99.87 E-value=6.6e-22 Score=187.29 Aligned_cols=133 Identities=23% Similarity=0.266 Sum_probs=99.5
Q ss_pred CccCCcCCCeEEEEEeeeecCEEeceeeeEee-CCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccC--------
Q psy9914 178 GTTSLEDGDIVNVDVTVYLNGYHGDCSATFCV-GEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRN-------- 248 (383)
Q Consensus 178 G~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~v-G~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~-------- 248 (383)
+.+++++||+|++|+++.++||++|++|||++ |+++++++++|++++++++++++++|||++++||+++++
T Consensus 66 ~~~~l~~Gd~v~vD~g~~~~GY~ad~~Rt~~vgg~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~ 145 (243)
T cd01087 66 NDQPLKDGDLVLIDAGAEYGGYASDITRTFPVNGKFTDEQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLK 145 (243)
T ss_pred CCCcCCCCCEEEEEeCceECCEeeeeeEEEEeCCcCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHH
Confidence 35889999999999999999999999999999 699999999999999999999999999999999998743
Q ss_pred -------------------CCCcCC-----CCceecccCC--CcCCCceeecCeEEe-CCCCCCCCC-CC------CCCC
Q psy9914 249 -------------------PDFDNS-----HALIWKHDNL--KLKNNGSIYLHVYFT-KPVSQFGDT-PQ------SLKT 294 (383)
Q Consensus 249 -------------------~~F~~~-----~~~~~h~~gl--~~~n~~~L~~GmV~T-EPgiy~G~~-p~------~~~~ 294 (383)
++|.|+ +..+++.|.+ ..+++.+|++||||| |||+|..-. ++ ..+.
T Consensus 146 ~~g~~~~~~~~~~~~~~~~~~~~h~~GhgiGl~~~e~p~~~~~~~~~~~l~~GMv~~iEp~iy~~~~~~~~~~~~~~~g~ 225 (243)
T cd01087 146 ELGILKGDVDEIVESGAYAKFFPHGLGHYLGLDVHDVGGYLRYLRRARPLEPGMVITIEPGIYFIPDLLDVPEYFRGGGI 225 (243)
T ss_pred hcCcccCchHhhhhhhhhhhhcCCCCccccCcccccCccccccCCCCCCCCCCCEEEECCEEEeCCcccccccccceeEE
Confidence 233332 1122333333 345678999999999 997763321 00 1111
Q ss_pred C--ceEEEEeeccccccc
Q psy9914 295 K--LTATTTIHGVKQLNK 310 (383)
Q Consensus 295 ~--~~~~~~~~~~k~Ln~ 310 (383)
+ ....+|..|++.||+
T Consensus 226 ~ied~v~Vt~~G~e~Lt~ 243 (243)
T cd01087 226 RIEDDVLVTEDGPENLTR 243 (243)
T ss_pred EeeeEEEEcCCcceeCcC
Confidence 1 222344578888874
No 21
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=99.87 E-value=8.2e-22 Score=185.76 Aligned_cols=110 Identities=35% Similarity=0.514 Sum_probs=91.6
Q ss_pred cCccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc----
Q psy9914 177 FGTTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD---- 252 (383)
Q Consensus 177 ~G~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~---- 252 (383)
++.++|++||+|.+|+++.++||++|++|||++|+++++++++|++++++++++++++|||++++||++++++.+.
T Consensus 71 ~~~~~l~~Gd~v~id~g~~~~GY~ad~~RT~~~G~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~G~ 150 (238)
T cd01086 71 PDDRVLKDGDIVNIDVGVELDGYHGDSARTFIVGEVSEEAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIEKYAEKNGY 150 (238)
T ss_pred CCCcccCCCCEEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCc
Confidence 4579999999999999999999999999999999999999999999999999999999999999999999653322
Q ss_pred --------CC-CCceecccCCC----cCCCceeecCeEEe-CCCCCCC
Q psy9914 253 --------NS-HALIWKHDNLK----LKNNGSIYLHVYFT-KPVSQFG 286 (383)
Q Consensus 253 --------~~-~~~~~h~~gl~----~~n~~~L~~GmV~T-EPgiy~G 286 (383)
|+ +..+++.|.+. ..++.+|++||||| ||++|.+
T Consensus 151 ~~~~~~~GHgiG~~~~e~p~~~~~~~~~~~~~le~Gmv~~iep~i~~~ 198 (238)
T cd01086 151 SVVREFGGHGIGRKFHEEPQIPNYGRPGTGPKLKPGMVFTIEPMINLG 198 (238)
T ss_pred ceecCccccCCCCccccCCCcCCccCCCCCCEecCCCEEEEeeEEECC
Confidence 22 22222223222 44679999999999 9988865
No 22
>KOG2738|consensus
Probab=99.86 E-value=2.4e-21 Score=184.95 Aligned_cols=142 Identities=36% Similarity=0.498 Sum_probs=111.3
Q ss_pred cccccccchhhhhhhhhhcccCcchhhhccccccccccCccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHH
Q psy9914 140 WALFPLLAGYAVYSLLYLEHKGWYSWVLNMLYGFLLTFGTTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFL 219 (383)
Q Consensus 140 ~~~~pl~~g~~~~sL~~~~~~GwySw~~~~sf~~I~a~G~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~i 219 (383)
|..+|-..+.++|++++|+.+. .|+|++||+|++|....++|||.|+.+||++|+++++.+++
T Consensus 172 Yy~FPKS~CTSVNEviCHGIPD-----------------~RpLedGDIvNiDVtvY~~GyHGDlneTffvG~Vde~~k~L 234 (369)
T KOG2738|consen 172 YYGFPKSVCTSVNEVICHGIPD-----------------SRPLEDGDIVNIDVTVYLNGYHGDLNETFFVGNVDEKAKKL 234 (369)
T ss_pred cCCCchhhhcchhheeecCCCC-----------------cCcCCCCCEEeEEEEEEeccccCccccceEeeccCHHHHHH
Confidence 3344444455555555555443 48999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCChhhHhhccC------------CCCcCC-CCceecccCCC--cC--CCceeecCeEEe-CC
Q psy9914 220 VNVAQQALHAAISVVKPGEYFSTIESDRN------------PDFDNS-HALIWKHDNLK--LK--NNGSIYLHVYFT-KP 281 (383)
Q Consensus 220 y~~v~ea~~~ai~~~kPG~~~~di~~~~~------------~~F~~~-~~~~~h~~gl~--~~--n~~~L~~GmV~T-EP 281 (383)
-++.+|+++.||+.+|||+++++|...+. .|.-|| +..||-.|.+- .. .-+++.+||+|| ||
T Consensus 235 VkvT~EcL~kaI~~~kpGv~freiG~iI~kha~~~g~sVVr~ycGHGig~~FH~~PnipHya~n~a~GvM~~G~tFTIEP 314 (369)
T KOG2738|consen 235 VKVTRECLEKAIAIVKPGVSFREIGNIIQKHATKNGYSVVRSYCGHGIGRVFHCAPNIPHYAKNKAPGVMKPGQTFTIEP 314 (369)
T ss_pred HHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhcCceeehhhhccccccccccCCCchhhcccCCcceeecCceEEeee
Confidence 99999999999999999999999998853 233366 44555555542 22 348999999999 99
Q ss_pred CCCCCCC-CCCCCCCceE
Q psy9914 282 VSQFGDT-PQSLKTKLTA 298 (383)
Q Consensus 282 giy~G~~-p~~~~~~~~~ 298 (383)
+|..|.. .....++|+.
T Consensus 315 mit~G~~~d~tWPD~WT~ 332 (369)
T KOG2738|consen 315 MITIGTWEDITWPDDWTA 332 (369)
T ss_pred eecccccccccCCCCceE
Confidence 9999988 3334556665
No 23
>PRK12896 methionine aminopeptidase; Reviewed
Probab=99.85 E-value=3.2e-21 Score=183.56 Aligned_cols=112 Identities=30% Similarity=0.464 Sum_probs=91.2
Q ss_pred cCccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc----
Q psy9914 177 FGTTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD---- 252 (383)
Q Consensus 177 ~G~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~---- 252 (383)
+..+.|++||+|.+|+|+.++||++|++|||++|+++++++++|+++++|++++++++|||++++||++++++.+.
T Consensus 86 p~~~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~G~ 165 (255)
T PRK12896 86 PGPRVIKDGDLVNIDVSAYLDGYHGDTGITFAVGPVSEEAEKLCRVAEEALWAGIKQVKAGRPLNDIGRAIEDFAKKNGY 165 (255)
T ss_pred CCCccCCCCCEEEEEEeEEECcEEEeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCC
Confidence 4458899999999999999999999999999999999999999999999999999999999999999998643222
Q ss_pred --------CC-CCceecccCCC-----cCCCceeecCeEEe-CCCCCCCCC
Q psy9914 253 --------NS-HALIWKHDNLK-----LKNNGSIYLHVYFT-KPVSQFGDT 288 (383)
Q Consensus 253 --------~~-~~~~~h~~gl~-----~~n~~~L~~GmV~T-EPgiy~G~~ 288 (383)
|+ +..+|+.|.+. ..++.+|++||||| ||++|.|..
T Consensus 166 ~~~~~~~GHgiG~~~he~p~~~~~~~~~~~~~~le~GmV~~iEp~i~~g~~ 216 (255)
T PRK12896 166 SVVRDLTGHGVGRSLHEEPSVILTYTDPLPNRLLRPGMTLAVEPFLNLGAK 216 (255)
T ss_pred EeccCcccCCcCcccccCCCccccCCCCCCCCEecCCcEEEEeceEEcCCC
Confidence 22 12222222121 23467999999999 998887644
No 24
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=99.84 E-value=5.6e-21 Score=182.20 Aligned_cols=106 Identities=13% Similarity=0.160 Sum_probs=87.4
Q ss_pred CccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCC--------
Q psy9914 178 GTTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNP-------- 249 (383)
Q Consensus 178 G~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~-------- 249 (383)
..+.+..|++|++|+|+.|+|||||+||||++| |+++|+++|+++++||+++++++|||++++||++++++
T Consensus 84 s~~~~~~~~~vl~d~G~~y~gY~sditRT~~v~-p~~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~~~~~ 162 (243)
T cd01091 84 SDKLLYHFGVIICSLGARYKSYCSNIARTFLID-PTSEQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKKKKPE 162 (243)
T ss_pred CccccCCCCEEEEEeCcccCCEeecceEEEEcC-CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHhChh
Confidence 357888999999999999999999999999998 79999999999999999999999999999999998642
Q ss_pred ---CCcC----CCCceecc-cC-CCcCCCceeecCeEEe-CCCCC
Q psy9914 250 ---DFDN----SHALIWKH-DN-LKLKNNGSIYLHVYFT-KPVSQ 284 (383)
Q Consensus 250 ---~F~~----~~~~~~h~-~g-l~~~n~~~L~~GmV~T-EPgiy 284 (383)
+|.| +.++-.|. +. +..+++.+|++||||| |||+|
T Consensus 163 ~~~~~~~~~GHgiGle~hE~~~~l~~~~~~~L~~GMvf~vepGi~ 207 (243)
T cd01091 163 LEPNFTKNLGFGIGLEFRESSLIINAKNDRKLKKGMVFNLSIGFS 207 (243)
T ss_pred HHHhCcCCcccccCcccccCccccCCCCCCCcCCCCEEEEeCCcc
Confidence 3332 21222233 22 2445778999999999 99776
No 25
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=99.82 E-value=8e-20 Score=172.10 Aligned_cols=129 Identities=22% Similarity=0.291 Sum_probs=97.6
Q ss_pred CccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCCh-----HHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc
Q psy9914 178 GTTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDA-----SGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD 252 (383)
Q Consensus 178 G~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~-----e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~ 252 (383)
+.++|++||+|++|+|+.++||+||+||||++|++++ +++++|+++++||+++++++|||++++||++++++.+.
T Consensus 79 ~~~~l~~Gd~v~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~~~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~~~ 158 (228)
T cd01089 79 ATYTLKDGDVVKIDLGCHIDGYIAVVAHTIVVGAEAETPVTGKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVIV 158 (228)
T ss_pred CCcccCCCCEEEEEEEEEECCEEEEEEEEEEeCCcCccccchHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHH
Confidence 5688999999999999999999999999999999875 89999999999999999999999999999999764433
Q ss_pred C-C----CCceecccC--CCcC-----CCceeecCeEEe-CCCCCCCCCCCCCCCC--ceEEEEeecccccc
Q psy9914 253 N-S----HALIWKHDN--LKLK-----NNGSIYLHVYFT-KPVSQFGDTPQSLKTK--LTATTTIHGVKQLN 309 (383)
Q Consensus 253 ~-~----~~~~~h~~g--l~~~-----n~~~L~~GmV~T-EPgiy~G~~p~~~~~~--~~~~~~~~~~k~Ln 309 (383)
+ + .....|..| ++.. -...|++||||+ ||++++ |+....+ .+..+|.+|++.||
T Consensus 159 ~~G~~~~~~~~~h~~g~~~~~~~~~~~~~~~l~~gmvf~~ep~~~~---~g~~~~~~~~Tv~vt~~G~e~lt 227 (228)
T cd01089 159 DYGCTPVEGVLSHQLKRVVSSGEGKAKLVECVKHGLLFPYPVLYEK---EGEVVAQFKLTVLLTPNGVTVLT 227 (228)
T ss_pred HcCCEEecCccccCcCceEecCCCCccchhhccCCcccccceeEcc---CCCeEEEEEEEEEEcCCCCeeCC
Confidence 2 1 112223222 2221 235699999999 995431 4432223 33355558998887
No 26
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=99.82 E-value=2.6e-20 Score=175.52 Aligned_cols=126 Identities=12% Similarity=0.021 Sum_probs=96.8
Q ss_pred ccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHHHHhc-CCCCChhhHhhccCC-------C
Q psy9914 179 TTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVV-KPGEYFSTIESDRNP-------D 250 (383)
Q Consensus 179 ~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ai~~~-kPG~~~~di~~~~~~-------~ 250 (383)
.+++++||+|++|+++.++||+||+||||++|+++++|+++|+++++++.++++.+ +||+++.+|++++++ .
T Consensus 76 ~r~l~~GD~V~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~g~~ 155 (224)
T cd01085 76 NRKISPDGLYLIDSGGQYLDGTTDITRTVHLGEPTAEQKRDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKAGLD 155 (224)
T ss_pred CcccCCCCEEEEEeCccCCCcccccEEeecCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCC
Confidence 58899999999999999999999999999999999999999999999999999988 499999999998642 3
Q ss_pred Cc----CCCC--ceec-ccCC--CcCCCceeecCeEEe-CCCCCCCCCCCCCCCC--ceEEEEeecccc
Q psy9914 251 FD----NSHA--LIWK-HDNL--KLKNNGSIYLHVYFT-KPVSQFGDTPQSLKTK--LTATTTIHGVKQ 307 (383)
Q Consensus 251 F~----~~~~--~~~h-~~gl--~~~n~~~L~~GmV~T-EPgiy~G~~p~~~~~~--~~~~~~~~~~k~ 307 (383)
|. |+.. +-+| .|.+ ..+++.+|++||||| |||+|. |+....+ ....+|.+||.-
T Consensus 156 ~~h~~GHgIG~~l~~hE~P~i~~~~~~~~~L~~GmvftiEP~iy~---~g~~gvried~v~Vt~~G~~~ 221 (224)
T cd01085 156 YGHGTGHGVGSFLNVHEGPQSISPAPNNVPLKAGMILSNEPGYYK---EGKYGIRIENLVLVVEAETTE 221 (224)
T ss_pred CCCCCCCCCCCCCcCCCCCCcCCcCCCCCCcCCCCEEEECCEeEe---CCCeEEEeeEEEEEeeCCcCC
Confidence 33 3322 2334 3444 345678999999999 996651 4332222 233445567653
No 27
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=99.81 E-value=2.2e-19 Score=171.36 Aligned_cols=144 Identities=25% Similarity=0.371 Sum_probs=113.2
Q ss_pred ccccccccchhhhhhhhhhcccCcchhhhccccccccccCccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCC-hHHH
Q psy9914 139 SWALFPLLAGYAVYSLLYLEHKGWYSWVLNMLYGFLLTFGTTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVD-ASGK 217 (383)
Q Consensus 139 ~~~~~pl~~g~~~~sL~~~~~~GwySw~~~~sf~~I~a~G~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s-~e~~ 217 (383)
.+..+|...|.++|++++|+.++ -.+.|++||+|++|+|+.++||++|.++||.+|+.+ +..+
T Consensus 60 gy~g~~~~~ciSvNe~v~HgiP~----------------d~~vlk~GDiv~IDvg~~~dG~~~Dsa~T~~vg~~~~~~~~ 123 (255)
T COG0024 60 GYKGFPFPTCISVNEVVAHGIPG----------------DKKVLKEGDIVKIDVGAHIDGYIGDTAITFVVGEVSDEDAK 123 (255)
T ss_pred cCcCCCcceEeehhheeeecCCC----------------CCcccCCCCEEEEEEEEEECCeeeeEEEEEECCCCChHHHH
Confidence 45667888899999999987775 147899999999999999999999999999999766 4777
Q ss_pred HHHHHHHHHHHHHHHhcCCCCChhhHhhccCCC-----------C-cCC-CCceecccCCC----cCCCceeecCeEEe-
Q psy9914 218 FLVNVAQQALHAAISVVKPGEYFSTIESDRNPD-----------F-DNS-HALIWKHDNLK----LKNNGSIYLHVYFT- 279 (383)
Q Consensus 218 ~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~-----------F-~~~-~~~~~h~~gl~----~~n~~~L~~GmV~T- 279 (383)
++.+++++|+.++|+.+|||++.+||.+++.++ | -|+ +..+|..|.+- ......|++|||||
T Consensus 124 ~L~~~t~eal~~~I~~vkpG~~l~~Ig~aIq~~~~~~G~~vVr~~~GHgig~~~He~p~ip~y~~~~~~~~l~~Gmv~aI 203 (255)
T COG0024 124 RLLEATKEALYAGIEAVKPGARLGDIGRAIQEYAESRGFSVVRNLTGHGIGRELHEEPSIPNYGKDGTGVRLKEGMVFAI 203 (255)
T ss_pred HHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCEEeecccCCccCcccCCCCeeccccCCCCCcccCCCCEEEE
Confidence 799999999999999999999999999986322 2 254 33445555441 11236999999999
Q ss_pred CCCCCCCCC-CCCCC-CCceE
Q psy9914 280 KPVSQFGDT-PQSLK-TKLTA 298 (383)
Q Consensus 280 EPgiy~G~~-p~~~~-~~~~~ 298 (383)
||++..|.. ..... ++|..
T Consensus 204 EPmi~~G~~~~~~~~~d~Wt~ 224 (255)
T COG0024 204 EPMINTGSGEVVEGPSDRWTL 224 (255)
T ss_pred eeEEEcCCCceEecCCCCeEE
Confidence 999998855 33333 55654
No 28
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=99.81 E-value=3.2e-19 Score=163.83 Aligned_cols=107 Identities=24% Similarity=0.324 Sum_probs=89.4
Q ss_pred CccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccC---------
Q psy9914 178 GTTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRN--------- 248 (383)
Q Consensus 178 G~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~--------- 248 (383)
+.+++++||+|.+|+|+.++||++|++|||++|+++++++++|+++.++++++++++|||++++||++++.
T Consensus 67 ~~~~l~~gd~v~id~g~~~~gy~~d~~RT~~~g~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~g~~ 146 (208)
T cd01092 67 SDRKIEEGDLVLIDFGAIYDGYCSDITRTVAVGEPSDELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEAGYG 146 (208)
T ss_pred CCcCcCCCCEEEEEeeeeECCEeccceeEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCcc
Confidence 35789999999999999999999999999999999999999999999999999999999999999999863
Q ss_pred CCCcC----CCCceec-ccCCCcCCCceeecCeEEe-CCCCC
Q psy9914 249 PDFDN----SHALIWK-HDNLKLKNNGSIYLHVYFT-KPVSQ 284 (383)
Q Consensus 249 ~~F~~----~~~~~~h-~~gl~~~n~~~L~~GmV~T-EPgiy 284 (383)
++|.| +..+.+| .|.+...++..|++||||+ ||++|
T Consensus 147 ~~~~~~~Gh~iG~~~~e~p~i~~~~~~~l~~gmv~~iep~~~ 188 (208)
T cd01092 147 EYFIHRTGHGVGLEVHEAPYISPGSDDVLEEGMVFTIEPGIY 188 (208)
T ss_pred ccCCCCCccccCcccCcCCCcCCCCCCCcCCCCEEEECCeEE
Confidence 23433 2112222 2334456789999999999 99654
No 29
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=99.74 E-value=6.2e-18 Score=155.68 Aligned_cols=106 Identities=25% Similarity=0.343 Sum_probs=85.1
Q ss_pred CccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCC-----CC-
Q psy9914 178 GTTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNP-----DF- 251 (383)
Q Consensus 178 G~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~-----~F- 251 (383)
+.++|++||+|.+|+++.++||++|++||+++| ++++++++|+.++++++++++.+|||++++||++++.+ .|
T Consensus 67 ~~~~l~~gd~v~id~~~~~~gy~~d~~Rt~~~G-~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~~ 145 (207)
T PF00557_consen 67 TDRRLQEGDIVIIDFGPRYDGYHADIARTFVVG-PTPEQRRAYEAAREALEAAIEALRPGVTGSDVYEAVREVLEEYGLE 145 (207)
T ss_dssp CSSBESTTEEEEEEEEEEETTEEEEEEEEEESS-SHHHHHHHHHHHHHHHHHHHHH-STTSBHHHHHHHHHHHHHHTTEG
T ss_pred cceeeecCCcceeeccceeeeeEeeeeeEEEEe-ecccccchhhhhHHHHHhHhhhcccccccchhhHHHHHHHHhhccc
Confidence 468999999999999999999999999999999 99999999999999999999999999999999998632 12
Q ss_pred ---c----CC-CCceecc-cCCC-cCCCceeecCeEEe-CCCCC
Q psy9914 252 ---D----NS-HALIWKH-DNLK-LKNNGSIYLHVYFT-KPVSQ 284 (383)
Q Consensus 252 ---~----~~-~~~~~h~-~gl~-~~n~~~L~~GmV~T-EPgiy 284 (383)
. |+ +..++.. |.+. .+++.+|++||||+ ||+++
T Consensus 146 ~~~~~~~GH~iG~~~~~~~P~i~~~~~~~~l~~gmv~~iep~~~ 189 (207)
T PF00557_consen 146 EPYPHGLGHGIGLEFHEPGPNIARPGDDTVLEPGMVFAIEPGLY 189 (207)
T ss_dssp EEBTSSSEEEESSSSSEEEEEESSTTTSSB--TTBEEEEEEEEE
T ss_pred ceeeecccccccccccccceeeecccccceecCCCceeEeeeEE
Confidence 1 22 2223322 4443 45789999999999 99554
No 30
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=99.72 E-value=9.9e-18 Score=151.77 Aligned_cols=106 Identities=23% Similarity=0.354 Sum_probs=88.0
Q ss_pred ccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCcC-C---
Q psy9914 179 TTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFDN-S--- 254 (383)
Q Consensus 179 ~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~~-~--- 254 (383)
.+.+++||+|++|+++.++||++|++|||++|+++++++++++++.++++++++.+|||+++.||++++.+.+.. +
T Consensus 67 ~~~i~~gd~v~~d~g~~~~gy~~d~~rt~~~g~~~~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~g~~~ 146 (207)
T cd01066 67 DRRLQEGDLVLVDLGGVYDGYHADLTRTFVIGEPSDEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGLGP 146 (207)
T ss_pred CCCcCCCCEEEEEeceeECCCccceeceeEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCccc
Confidence 478999999999999999999999999999999999999999999999999999999999999999996432221 0
Q ss_pred --CCceecccCC--------CcCCCceeecCeEEe-CCCCC
Q psy9914 255 --HALIWKHDNL--------KLKNNGSIYLHVYFT-KPVSQ 284 (383)
Q Consensus 255 --~~~~~h~~gl--------~~~n~~~L~~GmV~T-EPgiy 284 (383)
.....|..|+ ...++.+|++||||+ ||++|
T Consensus 147 ~~~~~~Gh~iG~~~~e~~~~~~~~~~~l~~gmv~~iep~~~ 187 (207)
T cd01066 147 NFGHRTGHGIGLEIHEPPVLKAGDDTVLEPGMVFAVEPGLY 187 (207)
T ss_pred cCCCCCccccCcccCCCCCcCCCCCCCcCCCCEEEECCEEE
Confidence 1122333333 345678999999999 99654
No 31
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=99.70 E-value=6.4e-17 Score=158.44 Aligned_cols=101 Identities=25% Similarity=0.344 Sum_probs=81.7
Q ss_pred ccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc------
Q psy9914 179 TTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD------ 252 (383)
Q Consensus 179 ~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~------ 252 (383)
.+.|++||+|.+|+|+.++||+||++|||++|+ .++++++++++|++++++++|||++++||++++.+.+.
T Consensus 72 ~~~l~~GDvV~iD~G~~~dGY~aD~arT~~vG~---~~~~l~~a~~~A~~aai~~~kPGv~~~dV~~ai~~vi~~~G~~~ 148 (295)
T TIGR00501 72 KTVFKDGDVVKLDLGAHVDGYIADTAITVDLGD---QYDNLVKAAKDALYTAIKEIRAGVRVGEIGKAIQEVIESYGVKP 148 (295)
T ss_pred CccCCCCCEEEEEEeEEECCEEEEEEEEEEeCc---HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCee
Confidence 468999999999999999999999999999995 37899999999999999999999999999999753221
Q ss_pred ------CCCC-ceecc----cCCCcCCCceeecCeEEe-CCC
Q psy9914 253 ------NSHA-LIWKH----DNLKLKNNGSIYLHVYFT-KPV 282 (383)
Q Consensus 253 ------~~~~-~~~h~----~gl~~~n~~~L~~GmV~T-EPg 282 (383)
|+.. ...|. |.+..++..+|++||||| ||+
T Consensus 149 i~~~~GHgig~~~~h~g~~ip~i~~~~~~~le~GmV~aIEP~ 190 (295)
T TIGR00501 149 ISNLTGHSMAPYRLHGGKSIPNVKERDTTKLEEGDVVAIEPF 190 (295)
T ss_pred ecCCCCcceecccccCCCccCeecCCCCCEeCCCCEEEEcee
Confidence 2211 12232 222345678999999999 994
No 32
>PRK08671 methionine aminopeptidase; Provisional
Probab=99.69 E-value=5.2e-17 Score=158.71 Aligned_cols=103 Identities=21% Similarity=0.302 Sum_probs=82.5
Q ss_pred ccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc------
Q psy9914 179 TTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD------ 252 (383)
Q Consensus 179 ~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~------ 252 (383)
.+.+++||+|.+|+|+.++||++|++||+++| ++++++++++++|++++++++|||++++||++++.+.+.
T Consensus 69 ~~~l~~GDvV~iD~G~~~dGY~aD~arT~~vG---~~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~~G~~~ 145 (291)
T PRK08671 69 ERVFPEGDVVKLDLGAHVDGYIADTAVTVDLG---GKYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRSYGFKP 145 (291)
T ss_pred CcccCCCCEEEEEEeEEECCEEEEEEEEEEeC---hhHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCcc
Confidence 47899999999999999999999999999999 478899999999999999999999999999999642211
Q ss_pred ------CCCCc-eec-ccC---CCcCCCceeecCeEEe-CCCCC
Q psy9914 253 ------NSHAL-IWK-HDN---LKLKNNGSIYLHVYFT-KPVSQ 284 (383)
Q Consensus 253 ------~~~~~-~~h-~~g---l~~~n~~~L~~GmV~T-EPgiy 284 (383)
|+-.. ..| .|. +...++.+|++||||+ ||++.
T Consensus 146 ~~~~~GHgiG~~~~he~p~ip~~~~~~~~~le~GmV~aIEp~~t 189 (291)
T PRK08671 146 IRNLTGHGLERYELHAGPSIPNYDEGGGVKLEEGDVYAIEPFAT 189 (291)
T ss_pred cCCCcccCcCCCcccCCCccCccCCCCCceeCCCCEEEEcceEE
Confidence 22111 112 221 1234678999999999 99543
No 33
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=99.68 E-value=3.3e-16 Score=158.81 Aligned_cols=109 Identities=19% Similarity=0.309 Sum_probs=87.8
Q ss_pred cCCcCCCeEEEEEeeeecCEEeceeeeEeeCC-----CChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCC---
Q psy9914 180 TSLEDGDIVNVDVTVYLNGYHGDCSATFCVGE-----VDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDF--- 251 (383)
Q Consensus 180 ~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~-----~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F--- 251 (383)
+.|++||+|.+|+|+.++||++|++|||++|+ ++++++++++++++|++++++++|||++++||++++.+.+
T Consensus 99 ~~Lk~GDvVkIDlG~~idGY~aD~arTv~vG~~~~~~~t~~~~~l~~aa~~A~~aai~~vkPG~~~~dI~~ai~~v~~~~ 178 (389)
T TIGR00495 99 YILKEGDVVKIDLGCHIDGFIALVAHTFVVGVAQEEPVTGRKADVIAAAHLAAEAALRLVKPGNTNTQVTEAINKVAHSY 178 (389)
T ss_pred cCcCCCCEEEEEEEEEECCEEEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHc
Confidence 78999999999999999999999999999995 4778999999999999999999999999999999964222
Q ss_pred ---------cCC-CCceec-ccCC--Cc-------CCCceeecCeEEe-CCCCCCCCC
Q psy9914 252 ---------DNS-HALIWK-HDNL--KL-------KNNGSIYLHVYFT-KPVSQFGDT 288 (383)
Q Consensus 252 ---------~~~-~~~~~h-~~gl--~~-------~n~~~L~~GmV~T-EPgiy~G~~ 288 (383)
.|+ +..++| .+.+ .. ..+..|++|||++ ||++.-|..
T Consensus 179 G~~~v~~~~gH~igr~~~~g~~~Ii~~~~~~~~~~~~~~~le~gev~aIEp~vs~G~g 236 (389)
T TIGR00495 179 GCTPVEGMLSHQLKQHVIDGEKVIISNPSDSQKKDHDTAEFEENEVYAVDILVSTGEG 236 (389)
T ss_pred CCeecCCceeecccceeccCCCeeeecCCccccCCCCCCEecCCCEEEEeeeecCCCc
Confidence 143 333344 2221 11 1356899999999 998776644
No 34
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=99.68 E-value=1.5e-16 Score=155.52 Aligned_cols=102 Identities=23% Similarity=0.280 Sum_probs=82.3
Q ss_pred ccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc------
Q psy9914 179 TTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD------ 252 (383)
Q Consensus 179 ~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~------ 252 (383)
++.+++||+|.+|+|+.++||+||++|||++|+ +++++++++++|++++++++|||++++||++++++.+.
T Consensus 68 ~~~l~~GDvV~iD~G~~~dGY~sD~arT~~vg~---~~~~l~ea~~~A~~~ai~~ikPG~~~~dV~~ai~~~i~~~G~~~ 144 (291)
T cd01088 68 DTVLKEGDVVKLDFGAHVDGYIADSAFTVDFDP---KYDDLLEAAKEALNAAIKEAGPDVRLGEIGEAIEEVIESYGFKP 144 (291)
T ss_pred CcccCCCCEEEEEEEEEECCEEEEEEEEEecCh---hHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCEE
Confidence 478999999999999999999999999999985 78899999999999999999999999999999753322
Q ss_pred ------CCCC-ceecc----cCCCcCCCceeecCeEEe-CCCC
Q psy9914 253 ------NSHA-LIWKH----DNLKLKNNGSIYLHVYFT-KPVS 283 (383)
Q Consensus 253 ------~~~~-~~~h~----~gl~~~n~~~L~~GmV~T-EPgi 283 (383)
|+.. ...|. |.+...++.+|++||||+ ||+.
T Consensus 145 ~~~~~GHgig~~~~h~~~~ip~~~~~~~~~le~gmV~aIEp~~ 187 (291)
T cd01088 145 IRNLTGHSIERYRLHAGKSIPNVKGGEGTRLEEGDVYAIEPFA 187 (291)
T ss_pred eecCCccCccCccccCCCccCccCCCCCCEeCCCCEEEEceeE
Confidence 2211 11111 112334578999999999 9943
No 35
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=99.63 E-value=1.1e-15 Score=157.11 Aligned_cols=103 Identities=18% Similarity=0.172 Sum_probs=83.1
Q ss_pred ccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCC---------
Q psy9914 179 TTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNP--------- 249 (383)
Q Consensus 179 ~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~--------- 249 (383)
.+.|++||+|.+|+|+.++||++|++|||++| ++++++++++++|+++|+++++||++++||++++++
T Consensus 231 ~~vLk~GDvVkID~G~~vdGYiaD~ArTv~vg---~~~~~L~eAv~eA~~aaI~~~kpGv~~~dI~~AIqevies~G~e~ 307 (470)
T PTZ00053 231 KTVLTYDDVCKLDFGTHVNGRIIDCAFTVAFN---PKYDPLLQATKDATNTGIKEAGIDVRLSDIGAAIQEVIESYEVEI 307 (470)
T ss_pred CcEecCCCeEEEEEeEEECCEEEeEEEEEEeC---HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcc
Confidence 47899999999999999999999999999997 689999999999999999999999999999999642
Q ss_pred ---CC-----c----CCCCc-eec----ccCCCcCCCceeecCeEEe-CCCCC
Q psy9914 250 ---DF-----D----NSHAL-IWK----HDNLKLKNNGSIYLHVYFT-KPVSQ 284 (383)
Q Consensus 250 ---~F-----~----~~~~~-~~h----~~gl~~~n~~~L~~GmV~T-EPgiy 284 (383)
+| . |+... ..| .|.+..++...|++||||| ||...
T Consensus 308 ~Gk~f~~k~I~nltGHgIG~y~iHe~k~iP~v~~~~~~~LeeGmVfaIEPf~s 360 (470)
T PTZ00053 308 KGKTYPIKSIRNLNGHSIGPYIIHGGKSVPIVKGGENTRMEEGELFAIETFAS 360 (470)
T ss_pred cCcccccccccCCcccCCCCccccCCCcCCeeCCCCCCEecCCCEEEEcceee
Confidence 22 1 22111 222 2222345668999999999 99544
No 36
>KOG1189|consensus
Probab=98.97 E-value=1.2e-09 Score=115.41 Aligned_cols=142 Identities=13% Similarity=0.165 Sum_probs=97.8
Q ss_pred hccccccccccC------------ccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHHHHhc
Q psy9914 167 LNMLYGFLLTFG------------TTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVV 234 (383)
Q Consensus 167 ~~~sf~~I~a~G------------~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ai~~~ 234 (383)
..+.+.+|..+| ...| + .|+.-+|++|++|||.++|||.+ .|+.++++.|+..+.||++.+.+|
T Consensus 202 ~d~cY~PIiqSGg~ydlk~sa~s~~~~L--~-~I~cs~G~RynsYCSNv~RT~Li-dpssemq~nY~fLl~aqe~il~~l 277 (960)
T KOG1189|consen 202 LDMCYPPIIQSGGKYDLKPSAVSDDNHL--H-VILCSLGIRYNSYCSNVSRTYLI-DPSSEMQENYEFLLAAQEEILKLL 277 (960)
T ss_pred cccccChhhhcCCccccccccccccccc--c-eEEeeccchhhhhhccccceeee-cchHHHHHHHHHHHHHHHHHHHhh
Confidence 345556666554 2556 3 88889999999999999999988 678899999999999999999999
Q ss_pred CCCCChhhHhhccCCCCc-----------C--C---CCceecc-cCCCcCCCceeecCeEEe-CCCCCCCCCCCCC-CCC
Q psy9914 235 KPGEYFSTIESDRNPDFD-----------N--S---HALIWKH-DNLKLKNNGSIYLHVYFT-KPVSQFGDTPQSL-KTK 295 (383)
Q Consensus 235 kPG~~~~di~~~~~~~F~-----------~--~---~~~~~h~-~gl~~~n~~~L~~GmV~T-EPgiy~G~~p~~~-~~~ 295 (383)
|||...+||+..+.++.. . | |..|-+. .-+...|+.+|++||||. -= +|+--+++. ...
T Consensus 278 rpG~ki~dVY~~~l~~v~k~~Pel~~~~~k~lG~~iGlEFREssl~inaKnd~~lk~gmvFni~l--Gf~nl~n~~~~~~ 355 (960)
T KOG1189|consen 278 RPGTKIGDVYEKALDYVEKNKPELVPNFTKNLGFGIGLEFRESSLVINAKNDRVLKKGMVFNISL--GFSNLTNPESKNS 355 (960)
T ss_pred cCCCchhHHHHHHHHHHHhcCcchhhhhhhhcccccceeeecccccccccchhhhccCcEEEEee--ccccccCcccccc
Confidence 999999999998643222 1 1 1122111 112467899999999998 43 222224331 111
Q ss_pred ------ceEEEEeecc-ccccchhhh
Q psy9914 296 ------LTATTTIHGV-KQLNKFKRL 314 (383)
Q Consensus 296 ------~~~~~~~~~~-k~Ln~y~k~ 314 (383)
.++.+...+. ..||.++|.
T Consensus 356 yaL~l~DTvlv~e~~p~~vLT~~~K~ 381 (960)
T KOG1189|consen 356 YALLLSDTVLVGEDPPAEVLTDSAKA 381 (960)
T ss_pred hhhhccceeeecCCCcchhhcccchh
Confidence 2333334444 778877764
No 37
>KOG2413|consensus
Probab=98.91 E-value=2.8e-09 Score=110.92 Aligned_cols=117 Identities=16% Similarity=0.143 Sum_probs=92.3
Q ss_pred hhcccccccccc-Cc--------------cCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHH
Q psy9914 166 VLNMLYGFLLTF-GT--------------TSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAA 230 (383)
Q Consensus 166 ~~~~sf~~I~a~-G~--------------~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~a 230 (383)
..+.||.+|.++ |. +++-+..+.++|-|+.|.-=..|+|||+.+|+||+++++.|-.|+..+-+.
T Consensus 363 fmglSFeTIS~s~G~NgAviHYsP~~e~n~~i~~~kiyL~DSGaQY~DGTTDvTRT~HfgePs~eek~~yT~VLkGhi~l 442 (606)
T KOG2413|consen 363 FMGLSFETISSSVGPNGAVIHYSPPAETNRIVSPDKIYLCDSGAQYLDGTTDVTRTVHFGEPTAEEKEAYTLVLKGHIAL 442 (606)
T ss_pred ccCcCcceeeccCCCCceeeecCCCccccceecCceEEEEccCcccccCccceeEEEecCCCCHHHHHHHHHHHHhhhHh
Confidence 456889998855 64 789999999999999874339999999999999999999999999999999
Q ss_pred HHhcCC-CCChhhHhhccC-------CCCcCC------CCceecccCCC-----cCCCceeecCeEEe-CCC
Q psy9914 231 ISVVKP-GEYFSTIESDRN-------PDFDNS------HALIWKHDNLK-----LKNNGSIYLHVYFT-KPV 282 (383)
Q Consensus 231 i~~~kP-G~~~~di~~~~~-------~~F~~~------~~~~~h~~gl~-----~~n~~~L~~GmV~T-EPg 282 (383)
.+++-| |....-+|..+| .+|.|+ .-+.+|.+.+. ..++..|++|||+| |||
T Consensus 443 a~~vFP~~t~g~~lD~laR~~LW~~gLDy~HgTGHGVG~fLnVhE~P~~is~r~~~~~~~l~ag~~~s~EPG 514 (606)
T KOG2413|consen 443 ARAVFPKGTKGSVLDALARSALWKAGLDYGHGTGHGVGSFLNVHEGPIGIGYRPYSSNFPLQAGMVFSIEPG 514 (606)
T ss_pred hhcccCCCCCcchhHHHHHHHHHhhccccCCCCCcccccceEeccCCceeeeeecCCCchhcCceEeccCCc
Confidence 998887 666667777654 355553 11335555542 34678899999999 994
No 38
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=98.44 E-value=6.1e-07 Score=93.84 Aligned_cols=132 Identities=15% Similarity=0.202 Sum_probs=93.7
Q ss_pred ccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCcCC----
Q psy9914 179 TTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFDNS---- 254 (383)
Q Consensus 179 ~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~~~---- 254 (383)
+..=--||+|+.-+|..|+||||.++|||.+ .|+.+|++-|+-.+.+|...+..+|||...++|+..+..|....
T Consensus 264 ~~~~l~gd~vl~s~GiRYn~YCSn~~RT~l~-dp~~e~~~Ny~fl~~lQk~i~~~~rpG~~~g~iY~~~~~yi~~~~pel 342 (1001)
T COG5406 264 FPMELTGDVVLLSIGIRYNGYCSNMSRTILT-DPDSEQQKNYEFLYMLQKYILGLVRPGTDSGIIYSEAEKYISSNGPEL 342 (1001)
T ss_pred CchhhcCceEEEEeeeeeccccccccceEEe-CCchHhhhhHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHhcCCcc
Confidence 3333468999999999999999999999987 67889999999999999999999999999999998864333211
Q ss_pred CCceecc-------------cCCCcCCCceeecCeEEe-CCCCCCCCC--CCCCCCCceE------EEEeeccccccchh
Q psy9914 255 HALIWKH-------------DNLKLKNNGSIYLHVYFT-KPVSQFGDT--PQSLKTKLTA------TTTIHGVKQLNKFK 312 (383)
Q Consensus 255 ~~~~~h~-------------~gl~~~n~~~L~~GmV~T-EPgiy~G~~--p~~~~~~~~~------~~~~~~~k~Ln~y~ 312 (383)
++-|..- ..+.+.|+.+|++||+|. -= +||-. |.+.+ .|.- .+.......+|.++
T Consensus 343 ~pnF~~nvG~~igiefR~s~~~~nvkn~r~lq~g~~fnis~--gf~nl~~~~~~N-nyal~l~dt~qi~ls~p~~~t~~~ 419 (1001)
T COG5406 343 GPNFIYNVGLMIGIEFRSSQKPFNVKNGRVLQAGCIFNISL--GFGNLINPHPKN-NYALLLIDTEQISLSNPIVFTDSP 419 (1001)
T ss_pred CchHhhhhhhhccccccccccceeccCCceeccccEEEEee--cccccCCCCccc-chhhhhccceEeecCCceecccCc
Confidence 1111111 122577899999999999 53 34544 44422 2222 22233456677777
Q ss_pred hh
Q psy9914 313 RL 314 (383)
Q Consensus 313 k~ 314 (383)
|-
T Consensus 420 ka 421 (1001)
T COG5406 420 KA 421 (1001)
T ss_pred cc
Confidence 63
No 39
>KOG2776|consensus
Probab=97.98 E-value=1.7e-05 Score=78.72 Aligned_cols=69 Identities=25% Similarity=0.430 Sum_probs=63.1
Q ss_pred ccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCC-----ChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhcc
Q psy9914 179 TTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEV-----DASGKFLVNVAQQALHAAISVVKPGEYFSTIESDR 247 (383)
Q Consensus 179 ~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~-----s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~ 247 (383)
...|++||+|.+|+|+..|||.|-.+.|++||.+ +....++..++.-|.++|+..+|||.+-..|-+++
T Consensus 100 ~~~Lk~GDvVKIdLG~HiDGfiA~vaHT~VV~~~~~~~vtG~kADvI~AAh~A~eaa~rllkpgn~n~~vT~~i 173 (398)
T KOG2776|consen 100 DYTLKEGDVVKIDLGVHIDGFIALVAHTIVVGPAPDTPVTGRKADVIAAAHLAAEAALRLLKPGNTNTQVTRAI 173 (398)
T ss_pred cccccCCCEEEEEeeeeeccceeeeeeeEEeccCCCCcccCchhHHHHHHHHHHHHHHHHhCCCCCCchhhHHH
Confidence 4679999999999999999999999999999754 57788999999999999999999999988888774
No 40
>KOG2489|consensus
Probab=97.97 E-value=3.2e-06 Score=86.64 Aligned_cols=69 Identities=41% Similarity=0.662 Sum_probs=57.3
Q ss_pred CcCCCceeecCeEEeCCCCCCCCCCCCCCCCceEEEEeeccccccchhhhhhccccCCCCCCCC-CCHHHHHHH
Q psy9914 265 KLKNNGSIYLHVYFTKPVSQFGDTPQSLKTKLTATTTIHGVKQLNKFKRLKFQRTQNLLTGQTE-ASLEEIKRW 337 (383)
Q Consensus 265 ~~~n~~~L~~GmV~TEPgiy~G~~p~~~~~~~~~~~~~~~~k~Ln~y~k~k~~k~~nLL~~~~~-~~~eeie~~ 337 (383)
++.+||+|+.|.+++.. |..|++.++-++...++|...+||+|++++++|+.|||+|+++ +.+|+++|-
T Consensus 123 ~l~~NgslYlH~fl~~~----G~~~d~~~~~~~~~~~v~~~~~l~~y~~~r~~kt~nLL~~e~e~~~~E~~kKa 192 (592)
T KOG2489|consen 123 SLRNNGSLYLHVFLAKA----GQSPDPRDPYYRDGKTVHLVHPLNKYKKPRAAKTFNLLTGESETQVDEKLKKA 192 (592)
T ss_pred HHhcCCeEEEEEEeecc----CCCCCccchhhccCceEEEEeehhhhcccchhhhhhhccCcchhcchhhhccc
Confidence 57899999999999944 6678876655666777899999999999999999999999888 666666553
No 41
>PF05602 CLPTM1: Cleft lip and palate transmembrane protein 1 (CLPTM1); InterPro: IPR008429 Clefts of the lip and/or palate (CL/P) are some of the most common birth defects. They may be categorised into syndromic or non-syndromic types, with syndromic defects having an underlying chromosomal or teratogenic cause. Around 70% of clefts are non-syndromic and individuals have no typical physical or developmental abnormalities; these clefts generally show polygenetic behaviour and complex inheritance []. Studies have identified regions on chromosomes 19 and 11 which may be involved in non-syndromic cleft lip and palates; this included a novel gene on chromosome 19, cleft lip and palate-associated transmembrane protein 1 (CLPTM1) []. The Poliovirus receptor-related 1 gene (PVRL1), which is located on chromosome 11, has also been shown to associate with non-syndromic cleft lip and palates [, ]. CLPTM1 encodes a transmembrane protein and has strong homology to two Caenorhabditis elegans genes, suggesting that CLPTM1 may belong to a new gene family []. This family also contains the Homo sapiens cisplatin resistance related protein CRR9p which is associated with CDDP-induced apoptosis [].
Probab=97.28 E-value=0.00016 Score=75.03 Aligned_cols=68 Identities=35% Similarity=0.616 Sum_probs=58.1
Q ss_pred cCCCceeecCeEEeCCCCCCCCCCCCCCCCceEEEEeeccccccchhhhhhccccCCCCCCCCCCHHHHHHH
Q psy9914 266 LKNNGSIYLHVYFTKPVSQFGDTPQSLKTKLTATTTIHGVKQLNKFKRLKFQRTQNLLTGQTEASLEEIKRW 337 (383)
Q Consensus 266 ~~n~~~L~~GmV~TEPgiy~G~~p~~~~~~~~~~~~~~~~k~Ln~y~k~k~~k~~nLL~~~~~~~~eeie~~ 337 (383)
+.|||+|++|.+++.. |..|++.++.|....+.+....||+|+++|..+++|||+|+++.++++.++-
T Consensus 106 ~~nNGSLylHv~l~~~----g~~~dp~~~~y~~~~~~~~~~~Lt~Y~~~~~~~~~NLL~~~~~~~~~~~~~~ 173 (438)
T PF05602_consen 106 VRNNGSLYLHVFLTKS----GFSPDPTDPNYDPSSVVHQSKPLTRYMPPKKAKTKNLLSGKSEEEEEESEEA 173 (438)
T ss_pred HhcCCEEEEEEEEecC----CCCCCCcccccCCCceEEEEEeceEeccCccchhhcCCCCCCccccchhhhc
Confidence 5799999999999954 7778887788888777799999999998888999999999888777766654
No 42
>KOG2775|consensus
Probab=95.74 E-value=0.041 Score=54.09 Aligned_cols=66 Identities=17% Similarity=0.169 Sum_probs=59.6
Q ss_pred cCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccC
Q psy9914 180 TSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRN 248 (383)
Q Consensus 180 ~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~ 248 (383)
..|+..|+..+|+|...+|-.-|.+.|+.+. +..-.+..+|++|-..+|+.+---++..||.+++.
T Consensus 159 tVLqydDV~KiDfGthi~GrIiDsAFTv~F~---p~~d~Ll~AvreaT~tGIkeaGiDvRlcdiG~aiq 224 (397)
T KOG2775|consen 159 TVLKYDDVMKIDFGTHIDGRIIDSAFTVAFN---PKYDPLLAAVREATNTGIKEAGIDVRLCDIGEAIQ 224 (397)
T ss_pred eeeeecceEEEeccccccCeEeeeeeEEeeC---ccccHHHHHHHHHHhhhhhhcCceeeehhhhHHHH
Confidence 6799999999999999999999999998873 45667889999999999999999999999999864
No 43
>PLN03158 methionine aminopeptidase; Provisional
Probab=92.36 E-value=0.1 Score=53.70 Aligned_cols=87 Identities=11% Similarity=0.020 Sum_probs=62.2
Q ss_pred CEEeceeeeEeeCCCC--hHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc-CCCC---c-eeccc--------
Q psy9914 198 GYHGDCSATFCVGEVD--ASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD-NSHA---L-IWKHD-------- 262 (383)
Q Consensus 198 GY~sD~tRT~~vG~~s--~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~-~~~~---~-~~h~~-------- 262 (383)
..++++.|+..+..+. +.+|++.+++.++++++.+++|||++-.||++++...+. ++.. + ++.+|
T Consensus 126 ~~~~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irpGvTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svcts~N 205 (396)
T PLN03158 126 EPNSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKPGVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVN 205 (396)
T ss_pred ccccccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCccccccccCCCceeeeccc
Confidence 3467788888888765 678999999999999999999999999999998643322 1110 0 01111
Q ss_pred ---CCCcCCCceeecCeEEe-CCCCC
Q psy9914 263 ---NLKLKNNGSIYLHVYFT-KPVSQ 284 (383)
Q Consensus 263 ---gl~~~n~~~L~~GmV~T-EPgiy 284 (383)
.+...++..|++|+++. +.|.+
T Consensus 206 ~~i~Hgip~~r~L~~GDiV~iDvg~~ 231 (396)
T PLN03158 206 EVICHGIPDARKLEDGDIVNVDVTVY 231 (396)
T ss_pred ccccCCCCCCccCCCCCEEEEEEeEE
Confidence 11233567899999999 98654
No 44
>PRK05716 methionine aminopeptidase; Validated
Probab=90.72 E-value=0.19 Score=47.54 Aligned_cols=70 Identities=9% Similarity=-0.012 Sum_probs=48.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc-CCCC-cee---ccc-----------CCCcCCCceeecCeE
Q psy9914 214 ASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD-NSHA-LIW---KHD-----------NLKLKNNGSIYLHVY 277 (383)
Q Consensus 214 ~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~-~~~~-~~~---h~~-----------gl~~~n~~~L~~GmV 277 (383)
+..|++.+++.++++++++.++||++..||..++...+. .+.. .+. .++ .+...++..|++|++
T Consensus 12 ~~~r~A~~i~~~~~~~a~~~i~pG~se~ela~~~~~~~~~~G~~~~~~~~~~~~~~~~~g~~~~~~h~~~~~~~l~~Gd~ 91 (252)
T PRK05716 12 EKMRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRDQGAIPAPLGYHGFPKSICTSVNEVVCHGIPSDKVLKEGDI 91 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHCCCEecccCCCCCCcCeEecccceeecCCCCCcccCCCCE
Confidence 457899999999999999999999999999877532222 1100 000 011 112346789999999
Q ss_pred Ee-CCCC
Q psy9914 278 FT-KPVS 283 (383)
Q Consensus 278 ~T-EPgi 283 (383)
|. +.|.
T Consensus 92 v~id~g~ 98 (252)
T PRK05716 92 VNIDVTV 98 (252)
T ss_pred EEEEEEE
Confidence 99 9854
No 45
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=90.59 E-value=0.21 Score=46.85 Aligned_cols=70 Identities=6% Similarity=-0.003 Sum_probs=48.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc-CCCCce----eccc-----------CCCcCCCceeecCeE
Q psy9914 214 ASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD-NSHALI----WKHD-----------NLKLKNNGSIYLHVY 277 (383)
Q Consensus 214 ~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~-~~~~~~----~h~~-----------gl~~~n~~~L~~GmV 277 (383)
+.+|++.+++.+++++++++++||++..||..++...+. ++.... ...+ .+...++..|++|++
T Consensus 2 ~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~l~~Gd~ 81 (238)
T cd01086 2 EGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTSVNEVVCHGIPDDRVLKDGDI 81 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCcccccCCCCCcceecCCCCceeCCCCCCcccCCCCE
Confidence 467899999999999999999999999999887543222 111000 0001 112235788999999
Q ss_pred Ee-CCCC
Q psy9914 278 FT-KPVS 283 (383)
Q Consensus 278 ~T-EPgi 283 (383)
+. +.|+
T Consensus 82 v~id~g~ 88 (238)
T cd01086 82 VNIDVGV 88 (238)
T ss_pred EEEEEEE
Confidence 99 9853
No 46
>PRK12896 methionine aminopeptidase; Reviewed
Probab=88.48 E-value=0.29 Score=46.39 Aligned_cols=80 Identities=8% Similarity=0.024 Sum_probs=54.0
Q ss_pred eeeEeeCCCCh--HHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc-CCCCc----eeccc-----------CCC
Q psy9914 204 SATFCVGEVDA--SGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD-NSHAL----IWKHD-----------NLK 265 (383)
Q Consensus 204 tRT~~vG~~s~--e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~-~~~~~----~~h~~-----------gl~ 265 (383)
.|++.+-.+.+ ..|++.+++.++.+++.+.++||++-.||...+...+. .+... ....+ .+.
T Consensus 5 ~~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~h~ 84 (255)
T PRK12896 5 GRGMEIKSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCISVNEEVAHG 84 (255)
T ss_pred CCceeECCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEecCCCeeEec
Confidence 57777766543 68899999999999999999999999999876532221 11000 00011 112
Q ss_pred cCCCceeecCeEEe-CCCC
Q psy9914 266 LKNNGSIYLHVYFT-KPVS 283 (383)
Q Consensus 266 ~~n~~~L~~GmV~T-EPgi 283 (383)
..++..|++|.++. +.|.
T Consensus 85 ~p~~~~l~~Gd~v~iD~g~ 103 (255)
T PRK12896 85 IPGPRVIKDGDLVNIDVSA 103 (255)
T ss_pred CCCCccCCCCCEEEEEEeE
Confidence 23568899999999 9854
No 47
>KOG2738|consensus
Probab=85.08 E-value=0.78 Score=45.33 Aligned_cols=35 Identities=20% Similarity=0.288 Sum_probs=32.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccC
Q psy9914 214 ASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRN 248 (383)
Q Consensus 214 ~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~ 248 (383)
+.+|++.+..+|.++.|-.++|||++..|||+++.
T Consensus 123 e~mR~ac~LarevLd~Aa~~v~PgvTTdEiD~~VH 157 (369)
T KOG2738|consen 123 EGMRKACRLAREVLDYAATLVRPGVTTDEIDRAVH 157 (369)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHH
Confidence 45788999999999999999999999999999964
No 48
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=83.29 E-value=0.93 Score=44.47 Aligned_cols=69 Identities=10% Similarity=-0.058 Sum_probs=47.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc-CC-----------CCceecccCCCcCCCceeecCeEEe-C
Q psy9914 214 ASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD-NS-----------HALIWKHDNLKLKNNGSIYLHVYFT-K 280 (383)
Q Consensus 214 ~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~-~~-----------~~~~~h~~gl~~~n~~~L~~GmV~T-E 280 (383)
+..|++.+++.++++++++.++||++..||.+.....+. .+ ....-|+... .+.+..|++|+++. +
T Consensus 2 ~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~G~~~afp~~is~n~~~~H~~p~-~~d~~~l~~GDvV~iD 80 (291)
T cd01088 2 EKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGAGPAFPVNLSINECAAHYTPN-AGDDTVLKEGDVVKLD 80 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCceeccCCEeeCCCCC-CCCCcccCCCCEEEEE
Confidence 467899999999999999999999999999887632221 11 1111122111 12346899999999 9
Q ss_pred CCC
Q psy9914 281 PVS 283 (383)
Q Consensus 281 Pgi 283 (383)
.|+
T Consensus 81 ~G~ 83 (291)
T cd01088 81 FGA 83 (291)
T ss_pred EEE
Confidence 864
No 49
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=83.07 E-value=1.4 Score=40.20 Aligned_cols=69 Identities=10% Similarity=-0.016 Sum_probs=48.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCC-Cc-CCCCceecccCC----------CcCCCceeecCeEEe-C
Q psy9914 214 ASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPD-FD-NSHALIWKHDNL----------KLKNNGSIYLHVYFT-K 280 (383)
Q Consensus 214 ~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~-F~-~~~~~~~h~~gl----------~~~n~~~L~~GmV~T-E 280 (383)
+..|++.+++.++++++.+.++||++-.||...+.+. +. ++....++.+-+ ...++..|++|.++. +
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~gd~v~id 80 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRRHGGEEPAFPPIVGSGPNTDLPHYTPTDRRLQEGDIVIID 80 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHHTTTTEESSESEEEECCCCGETTTBCCSSBESTTEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHcCCCcccCCceEecCCcceecceeccceeeecCCcceee
Confidence 3578999999999999999999999999998886543 22 222222222111 123578899999999 8
Q ss_pred CC
Q psy9914 281 PV 282 (383)
Q Consensus 281 Pg 282 (383)
=+
T Consensus 81 ~~ 82 (207)
T PF00557_consen 81 FG 82 (207)
T ss_dssp EE
T ss_pred cc
Confidence 63
No 50
>PF01321 Creatinase_N: Creatinase/Prolidase N-terminal domain; InterPro: IPR000587 Creatinase or creatine amidinohydrolase (3.5.3.3 from EC) catalyses the conversion of creatine and water to sarcosine and urea. The enzyme works as a homodimer, and is induced by choline chloride. Each monomer of creatinase has two clearly defined domains, a small N-terminal domain, and a large C-terminal domain. The structure of the C-terminal region represents the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. ; GO: 0016787 hydrolase activity; PDB: 1PV9_A 3CTZ_A 3IL0_B 3PN9_A 2HOW_A 1WN1_B 3I7M_A 1CHM_B 3QOC_D 1KP0_B ....
Probab=79.88 E-value=1.1 Score=37.24 Aligned_cols=39 Identities=15% Similarity=0.155 Sum_probs=35.5
Q ss_pred eeeeeeeeeeeeccchHHhhccCCCCceeechhHHHHHHH
Q psy9914 89 ELWKINKVLDISFAAGRKALGFIPIPDFKDKGSYVESSTK 128 (383)
Q Consensus 89 e~wkvek~~~lsv~~~~~L~~~lP~~~f~D~s~lIe~lRk 128 (383)
...|++. ..+++..+++|++.+|+.+++|.++.++++|.
T Consensus 93 ~~igve~-~~~~~~~~~~l~~~~~~~~~v~~~~~i~~~R~ 131 (132)
T PF01321_consen 93 KRIGVEP-DSLSAAEYQRLQEALPGAEFVDASPLIEELRM 131 (132)
T ss_dssp SEEEEET-TTSBHHHHHHHHHHSTTSEEEEEHHHHHHHHT
T ss_pred CEEEEcC-CcChHHHHHHHHHhCCCCEEEEcHHHHHHcCc
Confidence 7889998 56999999999999999999999999999883
No 51
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=73.61 E-value=3.8 Score=37.17 Aligned_cols=69 Identities=9% Similarity=-0.033 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCcC-CCCceeccc----------CCCcCCCceeecCeEEe-CCC
Q psy9914 215 SGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFDN-SHALIWKHD----------NLKLKNNGSIYLHVYFT-KPV 282 (383)
Q Consensus 215 e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~~-~~~~~~h~~----------gl~~~n~~~L~~GmV~T-EPg 282 (383)
..|++.+++.++.+++.+.++||++-.||.......+.. +...+++.+ .+...++..|++|.+++ +-|
T Consensus 3 ~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~~~~~~~v~~g~~~~~~h~~~~~~~l~~gd~v~id~g 82 (208)
T cd01092 3 LLRKAARIADKAFEELLEFIKPGMTEREVAAELEYFMRKLGAEGPSFDTIVASGPNSALPHGVPSDRKIEEGDLVLIDFG 82 (208)
T ss_pred HHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCCCCCCcEEEECccccccCCCCCCcCcCCCCEEEEEee
Confidence 578899999999999999999999999998875322211 111111111 11223567899999999 875
Q ss_pred C
Q psy9914 283 S 283 (383)
Q Consensus 283 i 283 (383)
.
T Consensus 83 ~ 83 (208)
T cd01092 83 A 83 (208)
T ss_pred e
Confidence 3
No 52
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=63.46 E-value=8.7 Score=36.10 Aligned_cols=69 Identities=12% Similarity=0.033 Sum_probs=46.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc-CCCC-ceec--------ccCCCcCCCceeecCeEEe-CCC
Q psy9914 214 ASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD-NSHA-LIWK--------HDNLKLKNNGSIYLHVYFT-KPV 282 (383)
Q Consensus 214 ~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~-~~~~-~~~h--------~~gl~~~n~~~L~~GmV~T-EPg 282 (383)
+..|++.+++.++.+++++.++||++-.||.+.+...+. .+.. .+.. ...+...++..|++|.++. +-|
T Consensus 2 ~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~G~~~~~~~~v~~g~~~~~~H~~~~~~~l~~Gd~v~vD~g 81 (243)
T cd01087 2 ELMRKACDISAEAHRAAMKASRPGMSEYELEAEFEYEFRSRGARLAYSYIVAAGSNAAILHYVHNDQPLKDGDLVLIDAG 81 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCCcCCCCeEEECCCccccCCCcCCCcCCCCCEEEEEeC
Confidence 357889999999999999999999999999888642222 1111 0000 0001123467899999988 875
No 53
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=62.98 E-value=9.5 Score=33.86 Aligned_cols=67 Identities=12% Similarity=0.066 Sum_probs=47.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCcC-C-----------CC--ceecccCCCcCCCceeecCeEEe
Q psy9914 214 ASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFDN-S-----------HA--LIWKHDNLKLKNNGSIYLHVYFT 279 (383)
Q Consensus 214 ~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~~-~-----------~~--~~~h~~gl~~~n~~~L~~GmV~T 279 (383)
+..|++-+++.++.+++.+.++||++-.|+.......+.. + +. ...|. ..++..+++|.++.
T Consensus 2 ~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~~~~~~v~~g~~~~~~h~----~~~~~~i~~gd~v~ 77 (207)
T cd01066 2 ARLRKAAEIAEAAMAAAAEAIRPGVTEAEVAAAIEQALRAAGGYPAGPTIVGSGARTALPHY----RPDDRRLQEGDLVL 77 (207)
T ss_pred HHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCCCCCcEEEECccccCcCC----CCCCCCcCCCCEEE
Confidence 3578899999999999999999999999998886422211 1 11 12221 12367899999999
Q ss_pred -CCCCC
Q psy9914 280 -KPVSQ 284 (383)
Q Consensus 280 -EPgiy 284 (383)
+-|..
T Consensus 78 ~d~g~~ 83 (207)
T cd01066 78 VDLGGV 83 (207)
T ss_pred EEecee
Confidence 88543
No 54
>PRK12897 methionine aminopeptidase; Reviewed
Probab=61.70 E-value=10 Score=35.97 Aligned_cols=34 Identities=12% Similarity=0.011 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccC
Q psy9914 215 SGKFLVNVAQQALHAAISVVKPGEYFSTIESDRN 248 (383)
Q Consensus 215 e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~ 248 (383)
..|++-+++.++++++.+.++||++-.||.....
T Consensus 12 ~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~ 45 (248)
T PRK12897 12 LMHESGKLLASCHREIAKIMKPGITTKEINTFVE 45 (248)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHH
Confidence 3678888999999999999999999999988753
No 55
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=59.45 E-value=12 Score=36.33 Aligned_cols=67 Identities=12% Similarity=0.030 Sum_probs=47.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc-CC-------------------CCceecccCCCcCCCceee
Q psy9914 214 ASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD-NS-------------------HALIWKHDNLKLKNNGSIY 273 (383)
Q Consensus 214 ~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~-~~-------------------~~~~~h~~gl~~~n~~~L~ 273 (383)
+..|++-+++.++++.+.+.++||++..||++.+.++.. ++ ...+-|.. +..+.+|+
T Consensus 12 ek~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~ciSvNe~v~Hgi---P~d~~vlk 88 (255)
T COG0024 12 EKMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTCISVNEVVAHGI---PGDKKVLK 88 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCceehhccCcCCCcceEeehhheeeecC---CCCCcccC
Confidence 457888899999999999999999999999998643222 11 00112221 12678899
Q ss_pred cCeEEe-CCCC
Q psy9914 274 LHVYFT-KPVS 283 (383)
Q Consensus 274 ~GmV~T-EPgi 283 (383)
+|.++. .=|.
T Consensus 89 ~GDiv~IDvg~ 99 (255)
T COG0024 89 EGDIVKIDVGA 99 (255)
T ss_pred CCCEEEEEEEE
Confidence 999998 7643
No 56
>PRK08671 methionine aminopeptidase; Provisional
Probab=51.19 E-value=12 Score=36.60 Aligned_cols=69 Identities=7% Similarity=-0.047 Sum_probs=46.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCcC-C-----------CCceecccCCCcCCCceeecCeEEe-C
Q psy9914 214 ASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFDN-S-----------HALIWKHDNLKLKNNGSIYLHVYFT-K 280 (383)
Q Consensus 214 ~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~~-~-----------~~~~~h~~gl~~~n~~~L~~GmV~T-E 280 (383)
+..|++-+++.++.+.+.+.++||++-.||.+.....+.. + +...-|+... ..++..|++|.++. +
T Consensus 3 ~~~r~A~~I~~~~~~~~~~~i~pG~se~ei~~~~~~~i~~~g~~~afp~~vs~n~~~~H~~p~-~~d~~~l~~GDvV~iD 81 (291)
T PRK08671 3 EKYLEAGKIASKVREEAAKLIKPGAKLLDVAEFVENRIRELGAKPAFPCNISINEVAAHYTPS-PGDERVFPEGDVVKLD 81 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCccCCCCEEeeCCCccCCCCC-CCCCcccCCCCEEEEE
Confidence 4578899999999999999999999999998875322211 1 1111222221 12346799999999 8
Q ss_pred CCC
Q psy9914 281 PVS 283 (383)
Q Consensus 281 Pgi 283 (383)
-|.
T Consensus 82 ~G~ 84 (291)
T PRK08671 82 LGA 84 (291)
T ss_pred EeE
Confidence 753
No 57
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=48.48 E-value=17 Score=35.81 Aligned_cols=69 Identities=6% Similarity=-0.110 Sum_probs=46.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCC---------CcC---CCCceecccCCCcCCCceeecCeEEe-C
Q psy9914 214 ASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPD---------FDN---SHALIWKHDNLKLKNNGSIYLHVYFT-K 280 (383)
Q Consensus 214 ~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~---------F~~---~~~~~~h~~gl~~~n~~~L~~GmV~T-E 280 (383)
+..|++-+++.++++.+++.++||++-.||.+..... |.. .+...-|+... ...+..|++|.++. +
T Consensus 6 ~~~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~~~g~~~aFp~~vs~n~~~~H~~p~-~~d~~~l~~GDvV~iD 84 (295)
T TIGR00501 6 EKWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIRELGAEPAFPCNISINECAAHFTPK-AGDKTVFKDGDVVKLD 84 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCCCCCcceecCCEeeCCCCC-CCcCccCCCCCEEEEE
Confidence 4578889999999999999999999999998875322 211 01111222221 12346799999999 9
Q ss_pred CCC
Q psy9914 281 PVS 283 (383)
Q Consensus 281 Pgi 283 (383)
-|.
T Consensus 85 ~G~ 87 (295)
T TIGR00501 85 LGA 87 (295)
T ss_pred EeE
Confidence 854
No 58
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=46.49 E-value=56 Score=33.57 Aligned_cols=33 Identities=18% Similarity=0.275 Sum_probs=29.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhc
Q psy9914 214 ASGKFLVNVAQQALHAAISVVKPGEYFSTIESD 246 (383)
Q Consensus 214 ~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~ 246 (383)
+..|++-+++.++++++++.++||++..||.+.
T Consensus 20 ~~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~ 52 (389)
T TIGR00495 20 TKYKMAGEIANNVLKSVVEACSPGAKVVDICEK 52 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHH
Confidence 457788899999999999999999999999864
No 59
>PF00254 FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomerase; InterPro: IPR001179 Synonym(s): Peptidylprolyl cis-trans isomerase FKBP-type peptidylprolyl isomerases (5.2.1.8 from EC) in vertebrates, are receptors for the two immunosuppressants, FK506 and rapamycin. The drugs inhibit T cell proliferation by arresting two distinct cytoplasmic signal transmission pathways. Peptidylprolyl isomerases accelerate protein folding by catalysing the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides. These proteins are found in a variety of organisms.; GO: 0006457 protein folding; PDB: 1IX5_A 3JXV_A 3JYM_A 1T11_A 1PBK_A 1FD9_A 2VCD_A 3B7X_A 1Q6H_B 1Q6I_B ....
Probab=45.90 E-value=52 Score=25.84 Aligned_cols=53 Identities=30% Similarity=0.361 Sum_probs=39.4
Q ss_pred CccCCcCCCeEEEEEeeee-cCEEecee------eeEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCC
Q psy9914 178 GTTSLEDGDIVNVDVTVYL-NGYHGDCS------ATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEY 239 (383)
Q Consensus 178 G~~~L~~Gd~V~iDlg~~~-~GY~sD~t------RT~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~ 239 (383)
|.+..++||.|.+++.+.. +|-.-|-+ .+|.+|... +..+.+.++..+++|-+
T Consensus 1 ~~~~~~~gd~V~i~y~~~~~~g~~~~~~~~~~~~~~~~~g~~~---------~i~g~e~al~~m~~Ge~ 60 (94)
T PF00254_consen 1 GPRTPKEGDTVTIHYTGRLEDGKVFDSSYQEGEPFEFRLGSGQ---------VIPGLEEALIGMKVGEK 60 (94)
T ss_dssp SSSSBSTTSEEEEEEEEEETTSEEEEETTTTTSEEEEETTSSS---------SSHHHHHHHTTSBTTEE
T ss_pred CCccCCCCCEEEEEEEEEECCCcEEEEeeecCcceeeeeccCc---------cccchhhhcccccCCCE
Confidence 4577899999999999986 77776666 566667521 34477788888888865
No 60
>PRK09795 aminopeptidase; Provisional
Probab=40.63 E-value=37 Score=34.03 Aligned_cols=68 Identities=6% Similarity=-0.054 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc-CCCCc------e--e--cccCCCcCCCceeecCeEEe-CCCC
Q psy9914 216 GKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD-NSHAL------I--W--KHDNLKLKNNGSIYLHVYFT-KPVS 283 (383)
Q Consensus 216 ~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~-~~~~~------~--~--h~~gl~~~n~~~L~~GmV~T-EPgi 283 (383)
.|++.+++.++.+++.+.+|||++=.||.+.....+. .|... + . ....+...++..|++|.+++ +-|.
T Consensus 136 ~r~a~~i~~~~~~~~~~~i~~G~tE~e~~~~~~~~~~~~G~~~~~f~~iv~sG~~~~~ph~~~~~~~l~~gd~v~~d~g~ 215 (361)
T PRK09795 136 IRLACGIADRGAEHIRRFIQAGMSEREIAAELEWFMRQQGAEKASFDTIVASGWRGALPHGKASDKIVAAGEFVTLDFGA 215 (361)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHCCCCcCCCCeEEEEeccccccCCCCCCceecCCCEEEEEecc
Confidence 6677788888888999999999998888776421111 11000 0 0 01112234668999999999 8863
No 61
>PRK10879 proline aminopeptidase P II; Provisional
Probab=37.03 E-value=33 Score=35.64 Aligned_cols=64 Identities=13% Similarity=0.141 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc-CC--------------CCceecccCCCcCCCceeecCeEEe
Q psy9914 215 SGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD-NS--------------HALIWKHDNLKLKNNGSIYLHVYFT 279 (383)
Q Consensus 215 e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~-~~--------------~~~~~h~~gl~~~n~~~L~~GmV~T 279 (383)
..|++.+++.+|+.++++.++||++=.||.......|. ++ .....| ...++..|++|.++.
T Consensus 181 ~~r~A~~i~~~a~~~~~~~~~pG~tE~ei~a~~~~~~~~~G~~~~~~~~iv~~G~na~~~H----~~~~~~~l~~GDlVl 256 (438)
T PRK10879 181 VLRRAGEISALAHTRAMEKCRPGMFEYQLEGEIHHEFNRHGARYPSYNTIVGSGENGCILH----YTENESEMRDGDLVL 256 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCcEEEEcCcccccc----CCCCccccCCCCEEE
Confidence 36678888899999999999999999888876432221 11 011112 234667899999998
Q ss_pred -CCC
Q psy9914 280 -KPV 282 (383)
Q Consensus 280 -EPg 282 (383)
+-|
T Consensus 257 iD~G 260 (438)
T PRK10879 257 IDAG 260 (438)
T ss_pred EEeC
Confidence 875
No 62
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=36.07 E-value=49 Score=31.03 Aligned_cols=68 Identities=7% Similarity=-0.020 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc-CC--CCce--------ecccC------CCcCCCceeecCeE
Q psy9914 215 SGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD-NS--HALI--------WKHDN------LKLKNNGSIYLHVY 277 (383)
Q Consensus 215 e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~-~~--~~~~--------~h~~g------l~~~n~~~L~~GmV 277 (383)
..|++.+++.++.+++++.+|||++-.||.+.....+. .+ .... +-..| +...++..|++|.+
T Consensus 3 ~ir~Aa~i~d~~~~~~~~~i~pG~tE~ei~a~~~~~~~~~ga~~~~~~~~~~~~~~v~~G~~~~~~H~~~~~r~l~~GD~ 82 (228)
T cd01090 3 LIRHGARIADIGGAAVVEAIREGVPEYEVALAGTQAMVREIAKTFPEVELMDTWTWFQSGINTDGAHNPVTNRKVQRGDI 82 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccCCcccccCcceEEEeeccccccCCCCCCcccCCCCE
Confidence 46888999999999999999999999999876422111 11 0000 00001 12346788999999
Q ss_pred Ee-CCC
Q psy9914 278 FT-KPV 282 (383)
Q Consensus 278 ~T-EPg 282 (383)
++ +-+
T Consensus 83 v~~d~g 88 (228)
T cd01090 83 LSLNCF 88 (228)
T ss_pred EEEEEe
Confidence 99 874
No 63
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=35.41 E-value=51 Score=30.75 Aligned_cols=32 Identities=22% Similarity=0.249 Sum_probs=28.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCChhhHhh
Q psy9914 214 ASGKFLVNVAQQALHAAISVVKPGEYFSTIES 245 (383)
Q Consensus 214 ~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~ 245 (383)
+..|++-+++.++++++++.++||++-.||.+
T Consensus 2 ~~~r~A~~I~~~~~~~~~~~i~pG~te~ei~~ 33 (228)
T cd01089 2 TKYKTAGQIANKVLKQVISLCVPGAKVVDLCE 33 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCcHHHHHH
Confidence 35789999999999999999999999888753
No 64
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=33.10 E-value=60 Score=30.48 Aligned_cols=68 Identities=9% Similarity=-0.016 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc-CCCCceec----ccC-----------CCcCCCceeecCeEE
Q psy9914 215 SGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD-NSHALIWK----HDN-----------LKLKNNGSIYLHVYF 278 (383)
Q Consensus 215 e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~-~~~~~~~h----~~g-----------l~~~n~~~L~~GmV~ 278 (383)
..|++.+++.++.+++++.++||++-.||.......+. ++....++ .++ +...++..|++|.++
T Consensus 11 ~~r~A~~i~~~~~~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~H~~~~~~~l~~Gd~v 90 (247)
T TIGR00500 11 KIRKAGRLAAEVLEELEREVKPGVSTKELDRIAKDFIEKHGAKPAFLGYYGFPGSVCISVNEVVIHGIPDKKVLKDGDIV 90 (247)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCCccccCCCCCCceeEeccccEEEecCCCCcccCCCCEE
Confidence 46788889999999999999999999998876432111 11100000 111 122457889999999
Q ss_pred e-CCC
Q psy9914 279 T-KPV 282 (383)
Q Consensus 279 T-EPg 282 (383)
. +-|
T Consensus 91 ~iD~g 95 (247)
T TIGR00500 91 NIDVG 95 (247)
T ss_pred EEEEE
Confidence 8 874
No 65
>PRK12318 methionine aminopeptidase; Provisional
Probab=29.18 E-value=73 Score=31.24 Aligned_cols=69 Identities=10% Similarity=-0.046 Sum_probs=45.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc-CC---------CCceecc--------cCCCcCCCceeecC
Q psy9914 214 ASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD-NS---------HALIWKH--------DNLKLKNNGSIYLH 275 (383)
Q Consensus 214 ~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~-~~---------~~~~~h~--------~gl~~~n~~~L~~G 275 (383)
+..|++-+++.+++++++++++||++-.||.......+. ++ ...|... ..+...++..|++|
T Consensus 50 e~~R~Aa~I~~~a~~a~~~~irpG~tE~Eiaa~~~~~~~~~G~~~~~~~~~~~~f~~~v~~g~n~~~~H~~p~~~~l~~G 129 (291)
T PRK12318 50 EKIRKACQVTARILDALCEAAKEGVTTNELDELSRELHKEYNAIPAPLNYGSPPFPKTICTSLNEVICHGIPNDIPLKNG 129 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCccccccCCCCCCcceEeeccceeecCCCCCCccCCC
Confidence 447788899999999999999999999999765422111 11 0011100 00123457889999
Q ss_pred eEEe-CCC
Q psy9914 276 VYFT-KPV 282 (383)
Q Consensus 276 mV~T-EPg 282 (383)
.++. +-|
T Consensus 130 D~V~vD~g 137 (291)
T PRK12318 130 DIMNIDVS 137 (291)
T ss_pred CEEEEEEe
Confidence 9999 874
No 66
>PRK07281 methionine aminopeptidase; Reviewed
Probab=26.11 E-value=91 Score=30.61 Aligned_cols=69 Identities=7% Similarity=-0.117 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCcC--------C--C--Cceec--------ccCCCcCCCceeec
Q psy9914 215 SGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFDN--------S--H--ALIWK--------HDNLKLKNNGSIYL 274 (383)
Q Consensus 215 e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~~--------~--~--~~~~h--------~~gl~~~n~~~L~~ 274 (383)
..|++-+++.++..++.+.+|||++-.||.......+.. + + ..|.+ ...+...++..|++
T Consensus 12 ~mr~A~~i~~~~~~~~~~~i~pG~te~ei~~~~~~~~~~~g~~~~~~G~~~~~~~f~~~v~~G~n~~~~H~~p~~~~l~~ 91 (286)
T PRK07281 12 AMDRAGDFLASIHIGLRDLIKPGVDMWEVEEYVRRRCKEENVLPLQIGVDGAMMDYPYATCCGLNDEVAHAFPRHYILKE 91 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCcccccCCCCcccCCCcceEEeccccccCCCCCCcCcCC
Confidence 367788888899999999999999999998764322110 0 0 00111 01112346789999
Q ss_pred CeEEe-CCCC
Q psy9914 275 HVYFT-KPVS 283 (383)
Q Consensus 275 GmV~T-EPgi 283 (383)
|.+++ +=|+
T Consensus 92 Gd~v~iD~g~ 101 (286)
T PRK07281 92 GDLLKVDMVL 101 (286)
T ss_pred CCEEEEEecc
Confidence 99999 8754
No 67
>PF06210 DUF1003: Protein of unknown function (DUF1003); InterPro: IPR010406 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=21.73 E-value=52 Score=27.78 Aligned_cols=15 Identities=47% Similarity=0.881 Sum_probs=11.8
Q ss_pred CCCchhHHHHHHHHh
Q psy9914 2 IFDPYCFQILNFYQT 16 (383)
Q Consensus 2 ~~~~~~~~~~~~~~~ 16 (383)
-||||-|-.||+++-
T Consensus 29 ~fDpyPFilLnl~lS 43 (108)
T PF06210_consen 29 AFDPYPFILLNLVLS 43 (108)
T ss_pred CCCCccHHHHHHHHH
Confidence 489999999997653
No 68
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=21.06 E-value=1.1e+02 Score=30.93 Aligned_cols=67 Identities=18% Similarity=0.162 Sum_probs=46.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCC----------CCcC----C-CCceecccCCCcCCCceeecCeEE
Q psy9914 214 ASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNP----------DFDN----S-HALIWKHDNLKLKNNGSIYLHVYF 278 (383)
Q Consensus 214 ~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~----------~F~~----~-~~~~~h~~gl~~~n~~~L~~GmV~ 278 (383)
+..|++.+++..|+.++++.++||++-.||.+.+.. .|.. | ..-+.| ...++..+++|-.+
T Consensus 161 ~~ir~A~~i~~~a~~~~~~~~~~g~tE~ev~a~l~~~~~~~G~~~~sf~~iv~~G~n~a~pH----~~~~~~~~~~gd~v 236 (384)
T COG0006 161 AKIRKAAEIADAALEAALEAIRPGMTEAEIAAELEYALRKGGAEGPSFDTIVASGENAALPH----YTPSDRKLRDGDLV 236 (384)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCccCcCcEEeccccccCcC----CCCCcccccCCCEE
Confidence 448899999999999999999999999998887531 1211 1 111122 23355677999999
Q ss_pred e-CCCCC
Q psy9914 279 T-KPVSQ 284 (383)
Q Consensus 279 T-EPgiy 284 (383)
+ +-|+.
T Consensus 237 liD~G~~ 243 (384)
T COG0006 237 LIDLGGV 243 (384)
T ss_pred EEEeeeE
Confidence 9 88643
No 69
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=20.82 E-value=1.2e+02 Score=32.25 Aligned_cols=32 Identities=28% Similarity=0.233 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhhHhhc
Q psy9914 215 SGKFLVNVAQQALHAAISVVKPGEYFSTIESD 246 (383)
Q Consensus 215 e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~ 246 (383)
..|++-+++.++.+.+.+.++||++..||...
T Consensus 160 ~~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ 191 (470)
T PTZ00053 160 DLRRAAEVHRQVRRYAQSVIKPGVKLIDICER 191 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHH
Confidence 37788888899999999999999999988775
Done!