Query psy9914
Match_columns 383
No_of_seqs 451 out of 2458
Neff 6.3
Searched_HMMs 29240
Date Fri Aug 16 22:52:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9914.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9914hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ig4_A XAA-Pro aminopeptidase; 100.0 4.1E-30 1.4E-34 261.6 11.3 223 98-345 140-421 (427)
2 3q6d_A Proline dipeptidase; st 100.0 8.9E-30 3.1E-34 251.9 12.0 218 88-314 91-352 (356)
3 4fkc_A XAA-Pro aminopeptidase; 100.0 2E-29 6.8E-34 251.3 11.9 217 89-314 112-373 (377)
4 2zsg_A Aminopeptidase P, putat 100.0 5E-29 1.7E-33 246.2 12.0 218 89-314 94-355 (359)
5 1wy2_A XAA-Pro dipeptidase; st 100.0 1.1E-28 3.7E-33 244.5 12.1 216 89-314 89-349 (351)
6 4ege_A Dipeptidase PEPE; struc 100.0 9.2E-29 3.2E-33 247.6 10.3 215 89-314 113-372 (378)
7 1wn1_A Dipeptidase; prolidase, 99.9 3.5E-28 1.2E-32 241.3 11.5 215 88-314 93-352 (356)
8 2v3z_A XAA-Pro aminopeptidase; 99.9 1.3E-27 4.3E-32 243.7 15.7 220 111-341 157-437 (440)
9 4fuk_A Methionine aminopeptida 99.9 5.3E-28 1.8E-32 238.8 12.3 197 141-351 86-333 (337)
10 2iw2_A XAA-Pro dipeptidase; me 99.9 7.2E-28 2.5E-32 249.0 12.6 207 115-344 173-486 (494)
11 3tb5_A Methionine aminopeptida 99.9 5.6E-28 1.9E-32 230.1 9.1 138 177-314 80-251 (264)
12 1chm_A Creatine amidinohydrola 99.9 4.4E-27 1.5E-31 236.6 10.7 224 88-313 117-393 (401)
13 3rva_A Organophosphorus acid a 99.9 4.8E-27 1.7E-31 240.5 10.0 198 113-314 143-442 (451)
14 1kp0_A Creatine amidinohydrola 99.9 1.2E-26 4E-31 232.7 8.5 225 88-314 117-394 (402)
15 4b28_A Metallopeptidase, famil 99.9 2.3E-26 7.7E-31 236.6 9.6 215 88-314 193-463 (470)
16 3mx6_A Methionine aminopeptida 99.9 2.3E-25 7.7E-30 212.1 14.3 140 177-316 84-258 (262)
17 3l24_A XAA-Pro dipeptidase; PI 99.9 2.3E-25 7.7E-30 231.2 11.2 170 112-286 142-387 (517)
18 3biq_A FACT complex subunit SP 99.9 9.6E-26 3.3E-30 230.7 7.9 224 89-314 131-441 (467)
19 1o0x_A Methionine aminopeptida 99.9 2.6E-25 8.8E-30 211.9 9.0 111 178-288 93-222 (262)
20 3tav_A Methionine aminopeptida 99.9 1.4E-25 4.7E-30 216.6 6.7 134 179-312 113-286 (286)
21 3cb6_A FACT complex subunit SP 99.9 6.8E-25 2.3E-29 222.8 11.5 171 112-284 160-394 (444)
22 3pka_A Methionine aminopeptida 99.9 4.4E-25 1.5E-29 213.1 8.9 109 178-286 118-244 (285)
23 1qxy_A Methionyl aminopeptidas 99.9 1.1E-24 3.9E-29 205.5 11.0 136 178-314 80-251 (252)
24 2gg2_A Methionine aminopeptida 99.9 1.6E-24 5.4E-29 206.1 11.7 137 178-314 82-253 (263)
25 2b3h_A Methionine aminopeptida 99.9 1.4E-23 4.7E-28 206.9 12.4 145 144-288 101-280 (329)
26 3s6b_A Methionine aminopeptida 99.9 3E-23 1E-27 207.1 12.4 169 144-312 129-351 (368)
27 3ctz_A XAA-Pro aminopeptidase 99.9 4E-23 1.4E-27 219.1 12.6 174 107-284 298-527 (623)
28 2q8k_A Proliferation-associate 99.8 6E-21 2.1E-25 192.7 12.3 119 180-298 105-253 (401)
29 1xgs_A Methionine aminopeptida 99.8 3.3E-20 1.1E-24 180.0 6.9 105 179-286 70-193 (295)
30 2nw5_A Methionine aminopeptida 99.7 3.6E-18 1.2E-22 170.1 8.2 103 179-284 120-249 (360)
31 3fm3_A Methionine aminopeptida 99.7 1.2E-16 4.1E-21 159.0 12.0 108 178-288 117-251 (358)
32 1b6a_A Methionine aminopeptida 99.7 2.9E-17 9.8E-22 168.7 6.7 106 179-287 239-371 (478)
33 4b6a_t Probable metalloproteas 98.3 2.5E-06 8.4E-11 89.3 10.7 68 179-246 151-247 (614)
34 3i7m_A XAA-Pro dipeptidase; st 87.4 0.22 7.4E-06 41.5 1.8 41 87-128 98-139 (140)
35 3o5v_A X-Pro dipeptidase; crea 84.2 0.33 1.1E-05 40.0 1.3 38 88-127 95-132 (132)
36 3ooo_A Proline dipeptidase; st 82.6 0.31 1.1E-05 40.1 0.6 38 88-127 95-132 (132)
37 3il0_A Aminopeptidase P; XAA-P 78.5 0.82 2.8E-05 37.2 1.8 39 88-128 91-129 (131)
38 3fm3_A Methionine aminopeptida 78.0 2.4 8E-05 41.5 5.2 70 215-284 47-134 (358)
39 3ovk_A Aminopeptidase P, XAA-P 75.7 0.58 2E-05 38.6 0.1 38 88-127 95-132 (132)
40 3pn9_A Proline dipeptidase; st 74.4 1.2 4E-05 36.6 1.6 40 88-128 97-136 (138)
41 3qoc_A Putative metallopeptida 70.2 0.74 2.5E-05 38.3 -0.5 40 87-127 95-135 (135)
42 4fuk_A Methionine aminopeptida 65.2 2.6 8.8E-05 40.7 2.1 70 214-283 70-156 (337)
43 3tb5_A Methionine aminopeptida 41.6 24 0.00083 32.2 4.4 64 215-282 12-96 (264)
44 3ig4_A XAA-Pro aminopeptidase; 40.2 20 0.00067 35.8 3.8 69 215-283 179-259 (427)
45 2kfw_A FKBP-type peptidyl-prol 35.9 88 0.003 27.7 7.0 90 182-281 3-100 (196)
46 1xgs_A Methionine aminopeptida 34.9 35 0.0012 32.0 4.4 68 214-282 4-84 (295)
47 2zsg_A Aminopeptidase P, putat 34.6 27 0.00092 33.1 3.7 65 215-283 141-221 (359)
48 1wy2_A XAA-Pro dipeptidase; st 32.8 35 0.0012 32.6 4.2 69 215-283 135-215 (351)
49 2b3h_A Methionine aminopeptida 32.6 35 0.0012 32.7 4.1 35 214-248 82-116 (329)
50 3drz_A BTB/POZ domain-containi 32.6 9.8 0.00033 30.4 0.1 35 4-42 57-92 (107)
51 2v3z_A XAA-Pro aminopeptidase; 32.5 35 0.0012 33.8 4.2 65 215-283 183-263 (440)
52 2nw5_A Methionine aminopeptida 30.7 43 0.0015 32.5 4.4 33 215-247 49-81 (360)
53 1nn7_A Potassium channel KV4.2 30.4 12 0.0004 30.0 0.2 37 4-44 47-84 (105)
54 3s6b_A Methionine aminopeptida 30.3 40 0.0014 33.0 4.1 35 214-248 110-144 (368)
55 1s1g_A Potassium voltage-gated 30.0 12 0.00042 30.9 0.3 36 4-43 60-96 (124)
56 1qxy_A Methionyl aminopeptidas 29.6 50 0.0017 29.6 4.4 33 215-247 11-43 (252)
57 3q6d_A Proline dipeptidase; st 29.5 33 0.0011 32.6 3.4 64 215-282 138-217 (356)
58 3mx6_A Methionine aminopeptida 29.3 45 0.0015 30.3 4.1 33 215-247 16-48 (262)
59 2ki0_A DS119; beta-alpha-beta, 26.0 36 0.0012 21.5 1.8 25 202-226 3-27 (36)
60 3tav_A Methionine aminopeptida 25.8 62 0.0021 29.9 4.4 34 214-247 41-74 (286)
61 2gg2_A Methionine aminopeptida 25.6 58 0.002 29.5 4.2 34 215-248 12-45 (263)
62 2nz0_B Potassium voltage-gated 25.3 16 0.00054 30.9 0.2 36 4-43 82-118 (140)
63 1o0x_A Methionine aminopeptida 25.1 52 0.0018 29.9 3.7 33 215-247 24-56 (262)
64 3pka_A Methionine aminopeptida 24.7 64 0.0022 29.9 4.3 34 214-247 48-81 (285)
65 2q8k_A Proliferation-associate 24.5 62 0.0021 31.8 4.3 34 214-247 26-59 (401)
66 4fkc_A XAA-Pro aminopeptidase; 24.4 58 0.002 31.1 4.1 67 216-282 159-238 (377)
67 1t1d_A Protein (potassium chan 23.9 18 0.00061 28.8 0.2 35 4-42 49-85 (100)
68 3kz7_A FK506-binding protein 3 23.7 1E+02 0.0035 24.2 4.9 54 178-240 16-83 (119)
69 2ppn_A FK506-binding protein 1 22.6 1E+02 0.0035 23.6 4.6 54 178-240 12-72 (107)
70 3kvt_A Potassium channel prote 21.4 20 0.00069 29.1 0.1 35 4-42 53-88 (115)
No 1
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis}
Probab=99.96 E-value=4.1e-30 Score=261.56 Aligned_cols=223 Identities=17% Similarity=0.237 Sum_probs=162.0
Q ss_pred eeeccchHHhhccCCCCceeechhHHHHHH--HHHHHHHH--HHhcc-------ccccccchhhhhhhhh-----hcccC
Q psy9914 98 DISFAAGRKALGFIPIPDFKDKGSYVESST--KQYDELAF--KYLSW-------ALFPLLAGYAVYSLLY-----LEHKG 161 (383)
Q Consensus 98 ~lsv~~~~~L~~~lP~~~f~D~s~lIe~lR--ke~DEia~--kal~~-------~~~pl~~g~~~~sL~~-----~~~~G 161 (383)
.++...+..|++.+|..+++|.++++.++| |+.+||+. +|..+ +...+..|.+++++.. ....|
T Consensus 140 ~~~~~~~~~l~~~~~~~~~~~~~~~i~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~tE~el~~~~~~~~~~~G 219 (427)
T 3ig4_A 140 TKTLAFAKHVREQYPHVTIGNVYPNICELRVFKTDEEIEIIKEAIAVTKDGIYNVLKHAKADMMEYELEAQFDFTLKSSG 219 (427)
T ss_dssp CHHHHHHHHHHHHCTTCEEEECHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEHHHHHHHHHHHHHHTT
T ss_pred ccCHHHHHHHHhhCCCCeEeEhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcC
Confidence 455667788889999999999999999999 77777777 23221 2223456777777531 22334
Q ss_pred cchhhhccccccccccC-----------ccCCcCCCeEEEEEeeeecCEEeceeeeEee-CCCChHHHHHHHHHHHHHHH
Q psy9914 162 WYSWVLNMLYGFLLTFG-----------TTSLEDGDIVNVDVTVYLNGYHGDCSATFCV-GEVDASGKFLVNVAQQALHA 229 (383)
Q Consensus 162 wySw~~~~sf~~I~a~G-----------~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~v-G~~s~e~~~iy~~v~ea~~~ 229 (383)
+.+.+|.+++++| .++|++||+|++|+|+.++||+||+||||++ |+++++|+++|++|++||++
T Consensus 220 ----~~~~~f~~ivasG~n~~~~H~~~~~~~l~~GdlvliD~G~~~~gY~sDitRT~~v~G~~s~~~~~~y~~vl~a~~~ 295 (427)
T 3ig4_A 220 ----IKHHAFNTILASGKNATVLHYEDNDAQIQNGDLVLLDLGAQKDYYNADISYTFPANGTFSSRQKQIYNIVLNALKE 295 (427)
T ss_dssp ----CCEESSCCEEEEGGGGGSTTCCCCCSEECTTCEEEEEECEEETTEECCEEEEEETTSCCCHHHHHHHHHHHHHHHH
T ss_pred ----CCCCCCCCEEEECccccccccCcccccCCCCCEEEEEeeeEECcEEEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 2334556666555 4889999999999999999999999999999 99999999999999999999
Q ss_pred HHHhcCCCCChhhHhhccCC--------------------CCcCCCCceecccCCCc-----CCCceeecCeEEe-CCCC
Q psy9914 230 AISVVKPGEYFSTIESDRNP--------------------DFDNSHALIWKHDNLKL-----KNNGSIYLHVYFT-KPVS 283 (383)
Q Consensus 230 ai~~~kPG~~~~di~~~~~~--------------------~F~~~~~~~~h~~gl~~-----~n~~~L~~GmV~T-EPgi 283 (383)
+++++|||++++||++++++ +|.|+ .+|..|+.+ .++.+|++||||| |||+
T Consensus 296 ~i~~~kpG~~~~di~~~a~~~i~~~~~~~G~~~~~~~~~~~~~Hg---~GH~iGl~vhe~~~~~~~~L~~GMV~tiEPgi 372 (427)
T 3ig4_A 296 TTEIIKPGLKFAALNEHAKKVLAEGCKAVGLIQEDEELSKYYYHG---VSHFLGLDTHDVGTYKDRVLEEGMVITIEPGL 372 (427)
T ss_dssp HHHTCCTTCBTHHHHHHHHHHHHHHHHHHTSCSSGGGGGGTCCSC---SCCBCSSSSSCCCCCTTCBCCTTCEEEECCEE
T ss_pred HHHHccCCCcHHHHHHHHHHHHHHhHhhcCCccCcchhhccCCCC---CCCcCCcCCCcCCCCCCCEeCCCCEEEECCEE
Confidence 99999999999999998542 23332 224444421 4678999999999 9965
Q ss_pred CCCCCCCCC-CCC--ceEEEEeeccccccchhhhhhccccCCCCCCCCCCHHHHHHHHhcCC--CCC
Q psy9914 284 QFGDTPQSL-KTK--LTATTTIHGVKQLNKFKRLKFQRTQNLLTGQTEASLEEIKRWIYKID--PTR 345 (383)
Q Consensus 284 y~G~~p~~~-~~~--~~~~~~~~~~k~Ln~y~k~k~~k~~nLL~~~~~~~~eeie~~~~~~~--~~~ 345 (383)
|+ |+.+ +.+ .++.+|.+|++.|| ...|++.+|||++|++.+ |.+
T Consensus 373 y~---~~~g~GvriEd~vlVt~~G~e~LT---------------~~~pk~~~~IE~~m~~~~~~~~~ 421 (427)
T 3ig4_A 373 YI---EEESIGIRIEDDILVTKDGHENLS---------------KDIIREVEEIEEFMRENNVNVKQ 421 (427)
T ss_dssp EE---GGGTEEEECBEEEEECSSSEEETT---------------TTSCCSHHHHHHHHHHHCTTC--
T ss_pred EE---CCCceEEEEeeEEEEeCCcCeECC---------------CCCCCCHHHHHHHHccCcccccc
Confidence 52 3321 111 22334446666444 357999999999999866 665
No 2
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis}
Probab=99.96 E-value=8.9e-30 Score=251.92 Aligned_cols=218 Identities=18% Similarity=0.228 Sum_probs=164.7
Q ss_pred ceeeeeeeeeeeeccchHHhhccCCCCceeechhHHHHHH--HHHHHHHH--HHh-------ccccccccchhhhhhhh-
Q psy9914 88 IELWKINKVLDISFAAGRKALGFIPIPDFKDKGSYVESST--KQYDELAF--KYL-------SWALFPLLAGYAVYSLL- 155 (383)
Q Consensus 88 ie~wkvek~~~lsv~~~~~L~~~lP~~~f~D~s~lIe~lR--ke~DEia~--kal-------~~~~~pl~~g~~~~sL~- 155 (383)
...++++. +.+++..+..|++.+|. +++|.++.+..+| |+.+||+. ++. ......+..|.++.++.
T Consensus 91 ~~~igve~-~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~R~iK~~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~te~e~~~ 168 (356)
T 3q6d_A 91 IQKLGFEQ-DTLTYSSYSAHKEAIDA-EFIPTSGLVEKLRLIKTDSEIKILKEAAQIADAAFEHILSFIRPGVSEIEVSN 168 (356)
T ss_dssp CSEEEEET-TTSBHHHHHHHHHHCCS-EEEEECSHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTTCCTTCBHHHHHH
T ss_pred CceEEEcC-ccCCHHHHHHHhhhccc-ceecchhhhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHH
Confidence 35678887 56899999999999998 9999999999999 77788776 222 12223455678887754
Q ss_pred ----hhcccCcchhhhccccccccccC-----------ccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHH
Q psy9914 156 ----YLEHKGWYSWVLNMLYGFLLTFG-----------TTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLV 220 (383)
Q Consensus 156 ----~~~~~GwySw~~~~sf~~I~a~G-----------~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy 220 (383)
.....| ..+.+|.+++++| .++|++||+|++|+|+.|+||++|+||||++|+++++++++|
T Consensus 169 ~~~~~~~~~g----~~~~~f~~iv~~g~n~~~~H~~~~~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~ 244 (356)
T 3q6d_A 169 ELEFFMRKQG----ATSSSFDIIVASGLRSALPHGVASEKVIETGDFVTLDFGAYYKGYCSDITRTIAVGEPSDKLKEIY 244 (356)
T ss_dssp HHHHHHHHTT----CSEESSCCEEEEGGGGGCTTCBCCSCBCCTTCEEEEEECEEETTEECCEEEEEESSCCCHHHHHHH
T ss_pred HHHHHHHHCC----CCcCCCCCEEEEcCccccCCCCCCCcccCCCCEEEEEEeEEECCEEeeeEEEEEcCCCCHHHHHHH
Confidence 122334 2334555555544 489999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCChhhHhhccC---------CCCcCC-----CCceecccCCCcCCCceeecCeEEe-CCCCCC
Q psy9914 221 NVAQQALHAAISVVKPGEYFSTIESDRN---------PDFDNS-----HALIWKHDNLKLKNNGSIYLHVYFT-KPVSQF 285 (383)
Q Consensus 221 ~~v~ea~~~ai~~~kPG~~~~di~~~~~---------~~F~~~-----~~~~~h~~gl~~~n~~~L~~GmV~T-EPgiy~ 285 (383)
++|++|++++++++|||++++||+++++ ++|.|+ |..+|+.|.+..+++.+|++||||| |||+|+
T Consensus 245 ~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~~~g~~~~~~h~~GHgiGl~~he~p~i~~~~~~~l~~Gmv~tiEPgiy~ 324 (356)
T 3q6d_A 245 NIVLEAQLRGVNGIKAGLTGREADALTRDYITEKGYGEYFGHSTGHGIGLEIHEAPGLAFRSDTVLEPGMAVTVEPGIYI 324 (356)
T ss_dssp HHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCGGGCCSCSEEECSSSSSEEEEESTTCCCBCCTTCEEEECCEEEE
T ss_pred HHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcccCCCCCcccCCCCcCcCCCCCCCCCCCcCCCCEEEECCEEEE
Confidence 9999999999999999999999999864 244442 2233444545556788999999999 996552
Q ss_pred CCCCCCCCCC--ceEEEEeeccccccchhhh
Q psy9914 286 GDTPQSLKTK--LTATTTIHGVKQLNKFKRL 314 (383)
Q Consensus 286 G~~p~~~~~~--~~~~~~~~~~k~Ln~y~k~ 314 (383)
|+..+.+ ....++.+|++.||+++|+
T Consensus 325 ---~g~~gvriEd~v~vt~~G~e~Lt~~p~~ 352 (356)
T 3q6d_A 325 ---PGIGGVRIEDDIIVTSEGNEVITKSPKE 352 (356)
T ss_dssp ---TTTEEEECBEEEEECSSSEEECCCSCCS
T ss_pred ---CCCCeEEEccEEEEeCCcceeCCCCCcc
Confidence 3332222 2334555899999988764
No 3
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus}
Probab=99.96 E-value=2e-29 Score=251.27 Aligned_cols=217 Identities=17% Similarity=0.166 Sum_probs=165.2
Q ss_pred eeeeeeeeeeeeccchHHhhccCCCCceeechhHHHHHH--HHHHHHHH--HHh-------ccccccccchhhhhhhh--
Q psy9914 89 ELWKINKVLDISFAAGRKALGFIPIPDFKDKGSYVESST--KQYDELAF--KYL-------SWALFPLLAGYAVYSLL-- 155 (383)
Q Consensus 89 e~wkvek~~~lsv~~~~~L~~~lP~~~f~D~s~lIe~lR--ke~DEia~--kal-------~~~~~pl~~g~~~~sL~-- 155 (383)
..++++. .+++..+.+|++.+|..+++|.+++++++| |+.+||+. ++. ......+..|.++.++.
T Consensus 112 ~~i~~d~--~~~~~~~~~l~~~~~~~~~~d~~~~i~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~~~G~tE~el~~~ 189 (377)
T 4fkc_A 112 EKLLIDD--TMPVGVFLKAKDIFDKYSLHPISPVISELREIKDKDEIKAHKKAAEIVDKVFYRFIEGKLEGKSERELANR 189 (377)
T ss_dssp CEEEECT--TSCHHHHHHTHHHHTTSEEEESHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTSCCTTCBHHHHHHH
T ss_pred ceeeeec--cccHHHHHHHHhhCCCCeEEEhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhhhccCCCccHHHHHHH
Confidence 4556664 678888889999999999999999999999 88888776 222 22233456788888753
Q ss_pred --h-h-cccCcchhhhccccccccccC-----------ccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHH
Q psy9914 156 --Y-L-EHKGWYSWVLNMLYGFLLTFG-----------TTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLV 220 (383)
Q Consensus 156 --~-~-~~~GwySw~~~~sf~~I~a~G-----------~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy 220 (383)
+ . ...| ..+.+|.+++++| .+++++||+|++|+|+.|+||++|+||||++|+++++++++|
T Consensus 190 ~~~~~~~~~g----~~~~~f~~iv~~G~n~~~~H~~~~~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~ 265 (377)
T 4fkc_A 190 IEYMIKNEFG----ADDVSFEPIVASGPNGANPHHRPSHRKIRKGDVVIFDYGAKYLGYCSDVTRTVVVGPPSEEVKKVY 265 (377)
T ss_dssp HHHHHHTSTT----CCEESSCCEEEEGGGGGCTTCCCCSCBCCTTCEEEEEECEEETTEECCEEEEEESSSCCTHHHHHH
T ss_pred HhhhhhhccC----CCCcccCccccccccccccccccccccccccccccccccccccCcccccceeEEEecCCHHHHHhh
Confidence 1 1 2334 3345666666665 489999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCChhhHhhccC---------CCCcCC-----CCceecccCCCcCCCceeecCeEEe-CCCCCC
Q psy9914 221 NVAQQALHAAISVVKPGEYFSTIESDRN---------PDFDNS-----HALIWKHDNLKLKNNGSIYLHVYFT-KPVSQF 285 (383)
Q Consensus 221 ~~v~ea~~~ai~~~kPG~~~~di~~~~~---------~~F~~~-----~~~~~h~~gl~~~n~~~L~~GmV~T-EPgiy~ 285 (383)
++|++||+++++++|||++++|++++++ ++|.|+ |..+|+.|.+..+++.+|++||||| |||+|+
T Consensus 266 ~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~~~g~~~~~~h~~GHgiGl~~hE~P~i~~~~~~~L~~Gmv~tiEPgiy~ 345 (377)
T 4fkc_A 266 EIVKEAQETAVQKVAEGIPAEVVDATARGIISKYGYGEYFIHRTGHGLGIDVHEEPYISPGNKKILKDGMVFTIEPGIYL 345 (377)
T ss_dssp HHHHHHHHHHHHHCBTTCBHHHHHHHHHHHHHHTTCTTTCCSCSEEECSSSSSEEEEECSSCCCBCCTTCEEEECCEEEE
T ss_pred hhhHHHHHHHHHhhcCCcchhhhHHHHHHHHHHhcccccCCCCCeEeCCCccccCCcccCCCCCEeCCCCEEEECCeeEE
Confidence 9999999999999999999999999864 345542 2233444555667889999999999 996552
Q ss_pred CCCCCCCCCCc--eEEEEeeccccccchhhh
Q psy9914 286 GDTPQSLKTKL--TATTTIHGVKQLNKFKRL 314 (383)
Q Consensus 286 G~~p~~~~~~~--~~~~~~~~~k~Ln~y~k~ 314 (383)
|+..+.+. ...+|..|++.||+++|+
T Consensus 346 ---~g~~GvriEd~v~Vt~~g~e~Lt~~p~e 373 (377)
T 4fkc_A 346 ---QGKFGVRIEDDVALVDKKGIRLTNADRE 373 (377)
T ss_dssp ---TTTEEEECBEEEEEETTEEEESCCSCCS
T ss_pred ---CCccEEEEccEEEEECCCcEECCCCCCC
Confidence 43322222 334566899999988864
No 4
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}
Probab=99.96 E-value=5e-29 Score=246.20 Aligned_cols=218 Identities=16% Similarity=0.206 Sum_probs=161.7
Q ss_pred eeeeeeeeeeeeccchHHhhccCCCCceeechhHHHHHH--HHHHHHHH--HHh-------ccccccccchhhhhhhhh-
Q psy9914 89 ELWKINKVLDISFAAGRKALGFIPIPDFKDKGSYVESST--KQYDELAF--KYL-------SWALFPLLAGYAVYSLLY- 156 (383)
Q Consensus 89 e~wkvek~~~lsv~~~~~L~~~lP~~~f~D~s~lIe~lR--ke~DEia~--kal-------~~~~~pl~~g~~~~sL~~- 156 (383)
...+++. ..++...+..|++.+|..+++|.++.++.+| |+.+||+. ++. ......+..|.++.++..
T Consensus 94 ~~vgvd~-~~~~~~~~~~l~~~l~~~~~v~~~~~i~~lr~iK~~~Ei~~~r~a~~~~~~~~~~~~~~~~~G~te~e~~~~ 172 (359)
T 2zsg_A 94 KTIALEE-ERVSLSLFRRISSAFGDRKFIGIDDEVKQMRMVKDEGEIEKIKQAIEISERAFLETVQQIRAGMTEKEIAAL 172 (359)
T ss_dssp CEEEECG-GGSBHHHHHHHHHHTTTCEEEECHHHHHHHHHBCCHHHHHHHHHHHHHHHHHHHHHHTTCCTTCBHHHHHHH
T ss_pred CEEEEeC-CcCCHHHHHHHHhhCCCcEEEEChhhhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHH
Confidence 4677776 5688888888888888789999999999999 77778776 221 122223456778776531
Q ss_pred ----hcccCcchhhhccccccccccC-----------ccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHH
Q psy9914 157 ----LEHKGWYSWVLNMLYGFLLTFG-----------TTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVN 221 (383)
Q Consensus 157 ----~~~~GwySw~~~~sf~~I~a~G-----------~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~ 221 (383)
....| +.+.+|++++++| .++|++||+|++|+|+.|+||++|+||||++|+++++++++|+
T Consensus 173 ~~~~~~~~g----~~~~~f~~iv~~g~~~~~~h~~~~~~~l~~gd~v~iD~g~~~~gy~~D~tRt~~~G~~~~~~~~~~~ 248 (359)
T 2zsg_A 173 LEYTMRKEG----AEGVAFDTIVASGCRSALPHGKASDKVVERGDVIVIDFGATYENYCADITRVVSIGEPSDEVKEVHS 248 (359)
T ss_dssp HHHHHHHTT----CSEESSCCEEEEGGGGGSTTCCCCSCBCCTTCEEEEEECEEETTEECCEEEEEESSSCCHHHHHHHH
T ss_pred HHHHHHHcC----CCCCCCCCEEEEccccccccCCCCCcccCCCCEEEEEEeEEECCEEEeeeEEEEcCCCCHHHHHHHH
Confidence 22334 2234455555444 4889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCChhhHhhccC---------CCCcCC-----CCceecccCCCcCCCceeecCeEEe-CCCCCCC
Q psy9914 222 VAQQALHAAISVVKPGEYFSTIESDRN---------PDFDNS-----HALIWKHDNLKLKNNGSIYLHVYFT-KPVSQFG 286 (383)
Q Consensus 222 ~v~ea~~~ai~~~kPG~~~~di~~~~~---------~~F~~~-----~~~~~h~~gl~~~n~~~L~~GmV~T-EPgiy~G 286 (383)
+|++||+++++++|||++++||+++++ ++|.|+ |..+|+.|.+..+++.+|++||||| |||+|+
T Consensus 249 ~v~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~~~~~~h~~GHgiGl~~he~p~i~~~~~~~l~~gmv~tiEPgiy~- 327 (359)
T 2zsg_A 249 IVLEAQERALKIAKAGVTGKLLDSVAREFIREKGYGEFFGHSLGHGIGLEVHEGPAISFRNDSPLPENVVFTVEPGIYL- 327 (359)
T ss_dssp HHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCGGGBCSCSEEECSSSSSEEEEESTTCCCBCCTTBEEEECCEEEE-
T ss_pred HHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCcccCCCCCccccCcccCCCCCcCCCCCCCcCCCCEEEECCEEEE-
Confidence 999999999999999999999999864 245442 2233344545556788999999999 996653
Q ss_pred CCCCCCCCC--ceEEEEeeccccccchhhh
Q psy9914 287 DTPQSLKTK--LTATTTIHGVKQLNKFKRL 314 (383)
Q Consensus 287 ~~p~~~~~~--~~~~~~~~~~k~Ln~y~k~ 314 (383)
|+..+.+ ....++.+|++.||+++|+
T Consensus 328 --~~~~gvriEd~v~vt~~g~e~Lt~~~~~ 355 (359)
T 2zsg_A 328 --EGKFGIRIEEDVVLKEQGCEILTTLPRS 355 (359)
T ss_dssp --TTTEEEECBEEEEEETTEEEECCCSCCS
T ss_pred --CCCcEEEEeeEEEEcCCcceECCCCCcc
Confidence 3322222 2334555899999987764
No 5
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A
Probab=99.95 E-value=1.1e-28 Score=244.49 Aligned_cols=216 Identities=18% Similarity=0.228 Sum_probs=161.4
Q ss_pred eeeeeeeeeeeeccchHHhhccCCCCceeechhHHHHHH--HHHHHHHH--HHhc-------cccccccchhhhhhhh--
Q psy9914 89 ELWKINKVLDISFAAGRKALGFIPIPDFKDKGSYVESST--KQYDELAF--KYLS-------WALFPLLAGYAVYSLL-- 155 (383)
Q Consensus 89 e~wkvek~~~lsv~~~~~L~~~lP~~~f~D~s~lIe~lR--ke~DEia~--kal~-------~~~~pl~~g~~~~sL~-- 155 (383)
..++++ ..++...+..|++.+|..+++|.++.+.++| |+.+||+. ++.. .....+..|.++.++.
T Consensus 89 ~~ig~e--~~~~~~~~~~l~~~~~~~~~~~~~~~i~~~r~iK~~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~te~el~~~ 166 (351)
T 1wy2_A 89 KSLGIE--SSLPYGFIEELKKKANIKEFKKVDDVIRDMRIIKSEKEIKIIEKACEIADKAVMAAIEEITEGKKEREVAAK 166 (351)
T ss_dssp SEEEEC--TTCBHHHHHHHHHHSCCCEEEECHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHH
T ss_pred CEEEEc--CcCCHHHHHHHHhhCCCCeEEEcHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHH
Confidence 567777 5788888888888888779999999999999 77777776 2221 1222344677777653
Q ss_pred --h-hcccCcchhhhccccccccccC-----------ccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHH
Q psy9914 156 --Y-LEHKGWYSWVLNMLYGFLLTFG-----------TTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVN 221 (383)
Q Consensus 156 --~-~~~~GwySw~~~~sf~~I~a~G-----------~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~ 221 (383)
+ ....| ..+.+|++++++| .++|++||+|++|+|+.|+||+||+||||++|+++++++++|+
T Consensus 167 ~~~~~~~~g----~~~~~f~~iv~~g~n~~~~H~~~~~~~l~~gd~v~iD~G~~~~gy~sD~tRT~~vG~~~~~~~~~~~ 242 (351)
T 1wy2_A 167 VEYLMKMNG----AEKPAFDTIIASGYRSALPHGVASDKRIERGDLVVIDLGALYQHYNSDITRTIVVGSPNEKQKEIYE 242 (351)
T ss_dssp HHHHHHHTT----CSEESSCCEEEEGGGGGSTTCBCCSCBCCTTCEEEEEECEEETTEECCEEEEEESSCCCHHHHHHHH
T ss_pred HHHHHHHcC----CCCCCCCCEEEEccccccccCCCCCcccCCCCEEEEEEEEEECCEEecceEEEEcCCCCHHHHHHHH
Confidence 1 22334 2234555555544 4899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCChhhHhhccC---------CCCcCC-----CCceecccCCCcCCCceeecCeEEe-CCCCCCC
Q psy9914 222 VAQQALHAAISVVKPGEYFSTIESDRN---------PDFDNS-----HALIWKHDNLKLKNNGSIYLHVYFT-KPVSQFG 286 (383)
Q Consensus 222 ~v~ea~~~ai~~~kPG~~~~di~~~~~---------~~F~~~-----~~~~~h~~gl~~~n~~~L~~GmV~T-EPgiy~G 286 (383)
+|++||+++++++|||++++||+++++ ++|.|+ |..+|+.|.+..+++.+|++||||| |||+|+
T Consensus 243 ~v~~a~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~~~~~~h~~GHgiGl~~hE~p~i~~~~~~~l~~Gmv~tiEPgiy~- 321 (351)
T 1wy2_A 243 IVLEAQKKAVESAKPGITAKELDSIARNIIAEYGYGEYFNHSLGHGVGLEVHEWPRVSQYDETVLREGMVITIEPGIYI- 321 (351)
T ss_dssp HHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCGGGCCSCSEEECSSSSSEEEEESTTCCCBCCTTCEEEECCEEEE-
T ss_pred HHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCcccCCCCcccccCCCcCCCCccCCCCCCCcCCCCEEEECCEEEe-
Confidence 999999999999999999999999864 345442 2233444555556788999999999 997663
Q ss_pred CCCCCCCCC--ceEEEEeeccc-cccchhhh
Q psy9914 287 DTPQSLKTK--LTATTTIHGVK-QLNKFKRL 314 (383)
Q Consensus 287 ~~p~~~~~~--~~~~~~~~~~k-~Ln~y~k~ 314 (383)
|+..+.+ ....++ +|++ .||+++|+
T Consensus 322 --~g~~gvriEd~v~Vt-~G~e~~Lt~~p~~ 349 (351)
T 1wy2_A 322 --PKIGGVRIEDTILIT-KNGSKRLTKTERE 349 (351)
T ss_dssp --TTTEEEECBEEEEEE-TTEEEESCCSCSC
T ss_pred --CCCCeEEEeeEEEEC-CCceecCCCCCcc
Confidence 3222222 345677 8999 99987764
No 6
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans}
Probab=99.95 E-value=9.2e-29 Score=247.63 Aligned_cols=215 Identities=16% Similarity=0.136 Sum_probs=160.1
Q ss_pred eeeeeeeeeeeeccchHHhhccCCCCceeechhHHHHHH--HHHHHHHH--HHhcc-------ccccccchhhhhhhh--
Q psy9914 89 ELWKINKVLDISFAAGRKALGFIPIPDFKDKGSYVESST--KQYDELAF--KYLSW-------ALFPLLAGYAVYSLL-- 155 (383)
Q Consensus 89 e~wkvek~~~lsv~~~~~L~~~lP~~~f~D~s~lIe~lR--ke~DEia~--kal~~-------~~~pl~~g~~~~sL~-- 155 (383)
..++++. .+++..+..|++.+ +.+++|.++.+.++| |+.+||+. ++... ....+..|.++.++.
T Consensus 113 ~~igve~--~~~~~~~~~l~~~~-~~~~~~~~~~i~~~R~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~tE~el~~~ 189 (378)
T 4ege_A 113 AATAVTD--SMPALHLLPLADAL-GVLPVLATDVLRQLRMVKEAAEVDALAKAGAAIDRVHARVPAFLVPGRTEAQVAAD 189 (378)
T ss_dssp CCEEECT--TCCHHHHHHHHHHH-TSCCEESHHHHHHHHTBCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHH
T ss_pred CEEEEcC--CCcHHHHHHHHHHc-CCeEEEcHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHH
Confidence 5788884 78888888998888 789999999999999 88888777 23221 222344577777653
Q ss_pred ---hhcccCcchhhhcccccccccc-----------CccCCcCCCeEEEEEeeee-cCEEeceeeeEeeCCCChHHHHHH
Q psy9914 156 ---YLEHKGWYSWVLNMLYGFLLTF-----------GTTSLEDGDIVNVDVTVYL-NGYHGDCSATFCVGEVDASGKFLV 220 (383)
Q Consensus 156 ---~~~~~GwySw~~~~sf~~I~a~-----------G~~~L~~Gd~V~iDlg~~~-~GY~sD~tRT~~vG~~s~e~~~iy 220 (383)
.....| ..+.+| +++++ +.++|++||+|++|+|+.+ +||+||+||||++|+++++++++|
T Consensus 190 ~~~~~~~~G----~~~~~f-~iv~sG~n~~~~H~~~~~~~l~~Gd~v~iD~G~~~~~GY~sD~tRT~~vG~~~~~~~~~~ 264 (378)
T 4ege_A 190 IAEAIVAEG----HSAVAF-VIVGSGPHGADPHHGYSDRKLQVGDIVVVDIGGTYEPGYYSDSTRTYSIGDPSPDVAQQY 264 (378)
T ss_dssp HHHHHHHTT----CSEEEE-EEEEEGGGGGCTTCCCCSCBCCTTCEEEEEEEEEETTTEECCEEEEEEESCCCHHHHHHH
T ss_pred HHHHHHHcC----CCCCCe-eEEEeeCCCCccCCCCCCCCcCCCCEEEEEEEEEECCeEEEccEEEEEeCCCCHHHHHHH
Confidence 122233 112233 34433 4589999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCChhhHhhccCC---------CCcCC-----CCceecccCCCcCCCceeecCeEEe-CCCCCC
Q psy9914 221 NVAQQALHAAISVVKPGEYFSTIESDRNP---------DFDNS-----HALIWKHDNLKLKNNGSIYLHVYFT-KPVSQF 285 (383)
Q Consensus 221 ~~v~ea~~~ai~~~kPG~~~~di~~~~~~---------~F~~~-----~~~~~h~~gl~~~n~~~L~~GmV~T-EPgiy~ 285 (383)
++|++||+++++++|||++++||++++++ +|.|+ +..+|+.|.+..+++.+|++||||| |||+|.
T Consensus 265 ~~v~~a~~~~~~~~~pG~~~~~v~~~~~~~~~~~G~~~~~~h~~GHgiGl~~hE~P~i~~~~~~~L~~Gmv~tiEPgiy~ 344 (378)
T 4ege_A 265 SALQRAQRAAVDAVRPGVTAAQVDAAARDVLADAGLAEYFVHRTGHGIGLCVHEEPYIVAGNELPLVAGMAFSIEPGIYF 344 (378)
T ss_dssp HHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCGGGCCSCSEEECSSSSSEEEEECTTCCCBCCTTBEEEECCEEEE
T ss_pred HHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCCcCCCCCcccCCCCcCCCCccCCCCCCccCCCCEEEECCEEEe
Confidence 99999999999999999999999998642 44442 2233444444556789999999999 996552
Q ss_pred CCCCCCCCCC--ceEEEEeeccccccchhhh
Q psy9914 286 GDTPQSLKTK--LTATTTIHGVKQLNKFKRL 314 (383)
Q Consensus 286 G~~p~~~~~~--~~~~~~~~~~k~Ln~y~k~ 314 (383)
|+..+.+ ....++.+|++.||+++|+
T Consensus 345 ---~g~~gvriEd~v~Vt~~G~e~Lt~~p~~ 372 (378)
T 4ege_A 345 ---PGRWGARIEDIVVVTENGALSVNNRPHE 372 (378)
T ss_dssp ---TTTEEEECBEEEEEETTEEEESCCSCCS
T ss_pred ---CCccEEEEeeEEEEeCCcCeECCCCCCc
Confidence 4332222 2334555899999998875
No 7
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A
Probab=99.95 E-value=3.5e-28 Score=241.31 Aligned_cols=215 Identities=17% Similarity=0.125 Sum_probs=158.0
Q ss_pred ceeeeeeeeeeeeccchHHhhccCCCCceeechhHHHHHH--HHHHHHHH--HH-------hccccccccchhhhhhhhh
Q psy9914 88 IELWKINKVLDISFAAGRKALGFIPIPDFKDKGSYVESST--KQYDELAF--KY-------LSWALFPLLAGYAVYSLLY 156 (383)
Q Consensus 88 ie~wkvek~~~lsv~~~~~L~~~lP~~~f~D~s~lIe~lR--ke~DEia~--ka-------l~~~~~pl~~g~~~~sL~~ 156 (383)
...++++ ..++...+..|++. |..+++|.++.+.++| |+.+||+. ++ +......+..|.++.++..
T Consensus 93 ~~~i~~~--~~~~~~~~~~l~~~-~~~~~~~~~~~i~~~R~iK~~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~te~el~~ 169 (356)
T 1wn1_A 93 KGRILIE--DTMRADWLIGIMKL-GKFTFQPLSSLIKELRMIKDKEEVKMMEHASRIADKVFEEILTWDLIGMKERELAL 169 (356)
T ss_dssp SEEEEEC--TTSBHHHHHHHGGG-SCEEEEETHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTSCCTTCBHHHHHH
T ss_pred CCEEEEe--CCcCHHHHHHHHcC-CCCeEEEcHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHH
Confidence 3467777 46788888888877 8889999999999999 77777776 22 1222233556777776531
Q ss_pred ------hcccCcchhhhcccccccccc-----------CccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHH
Q psy9914 157 ------LEHKGWYSWVLNMLYGFLLTF-----------GTTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFL 219 (383)
Q Consensus 157 ------~~~~GwySw~~~~sf~~I~a~-----------G~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~i 219 (383)
..+ + .+.+|.+++++ +.++|++||+|++|+|+.++||+||+||||++|+++++++++
T Consensus 170 ~~~~~~~~~-~-----~~~~f~~iv~~g~n~~~~H~~~~~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~vG~~~~~~~~~ 243 (356)
T 1wn1_A 170 KIELLIREL-S-----DGIAFEPIVASGENAANPHHEPGERKIRKGDIIILDYGARWKGYCSDITRTIGLGELDERLVKI 243 (356)
T ss_dssp HHHHHHHHH-S-----SEESSCCEEEEGGGGGCTTCCCCSCBCCTTCEEEEEECEEETTEECCEEEEEESSSCCHHHHHH
T ss_pred HHHHHHHHh-C-----cCCCCCcEEEEecccccccCCCCCCeecCCCEEEEEEEEEECCEEeccEEEEEcCCCCHHHHHH
Confidence 112 2 11334444443 358999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCChhhHhhccCC---------CCcCC-----CCceecccCCCcCCCceeecCeEEe-CCCCC
Q psy9914 220 VNVAQQALHAAISVVKPGEYFSTIESDRNP---------DFDNS-----HALIWKHDNLKLKNNGSIYLHVYFT-KPVSQ 284 (383)
Q Consensus 220 y~~v~ea~~~ai~~~kPG~~~~di~~~~~~---------~F~~~-----~~~~~h~~gl~~~n~~~L~~GmV~T-EPgiy 284 (383)
|++|++||+++++++|||++++||++++++ +|.|+ |..+|+.|.+..+++.+|++||||| |||+|
T Consensus 244 ~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~~~g~~~~~~h~~GHgiGl~~he~p~i~~~~~~~l~~Gmv~tiEPgiy 323 (356)
T 1wn1_A 244 YEVVKDAQESAFKAVREGIKAKDVDSRAREVISKAGYGEYFIHRTGHGLGLDVHEEPYIGPDGEVILKNGMTFTIEPGIY 323 (356)
T ss_dssp HHHHHHHHHHHHHHCBTTSBHHHHHHHHHHHHHTTTCGGGCCSCSEEECSSSSSEEEEESTTCCCBCCTTCEEEECCEEE
T ss_pred HHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcccCCCCCcccCCCccCCCcccCCCCCCCcCCCCEEEECCeeE
Confidence 999999999999999999999999998642 44442 2233334444556788999999999 99665
Q ss_pred CCCCCCCCCCC--ceEEEEeeccccccchhhh
Q psy9914 285 FGDTPQSLKTK--LTATTTIHGVKQLNKFKRL 314 (383)
Q Consensus 285 ~G~~p~~~~~~--~~~~~~~~~~k~Ln~y~k~ 314 (383)
+ |+..+.+ ....++.+|++.||+++|+
T Consensus 324 ~---~g~~gvriEd~v~Vt~~g~e~Lt~~p~~ 352 (356)
T 1wn1_A 324 V---PGLGGVRIEDDIVVDEGKGRRLTKAERE 352 (356)
T ss_dssp E---TTTEEEECBEEEEEETTEEEESCCCCCS
T ss_pred e---CCCcEEEEeeEEEEeCCccEECCCCCCc
Confidence 3 3322222 2334555899999987764
No 8
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ...
Probab=99.95 E-value=1.3e-27 Score=243.74 Aligned_cols=220 Identities=17% Similarity=0.200 Sum_probs=147.7
Q ss_pred CCCCceeechhHHHHHH--HHHHHHHH--HHhc-------cccccccchhhhhhhh----h-hcccCcchhhhccccccc
Q psy9914 111 IPIPDFKDKGSYVESST--KQYDELAF--KYLS-------WALFPLLAGYAVYSLL----Y-LEHKGWYSWVLNMLYGFL 174 (383)
Q Consensus 111 lP~~~f~D~s~lIe~lR--ke~DEia~--kal~-------~~~~pl~~g~~~~sL~----~-~~~~GwySw~~~~sf~~I 174 (383)
+|..+++|.++.+..+| |+.+||+. +|.. .....+..|.++.++. + ....| +.+.+|.++
T Consensus 157 ~~~~~~~~~~~~i~~~R~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~tE~el~~~~~~~~~~~G----~~~~~f~~i 232 (440)
T 2v3z_A 157 TAPATMIDWRPVVHEMRLFKSPEEIAVLRRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHHEFNRHG----ARYPSYNTI 232 (440)
T ss_dssp CCCSEEECCHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTT----CCEESSCCE
T ss_pred CCcceeeeHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcC----CCcCCCCCe
Confidence 36678999999999999 77777776 2221 1122344577777653 1 22334 333556666
Q ss_pred cccC-----------ccCCcCCCeEEEEEeeeecCEEeceeeeEee-CCCChHHHHHHHHHHHHHHHHHHhcCCCCChhh
Q psy9914 175 LTFG-----------TTSLEDGDIVNVDVTVYLNGYHGDCSATFCV-GEVDASGKFLVNVAQQALHAAISVVKPGEYFST 242 (383)
Q Consensus 175 ~a~G-----------~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~v-G~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~d 242 (383)
+++| .++|++||+|++|+|+.|+||+||+||||++ |+++++++++|++|++||+++++++|||++++|
T Consensus 233 v~~G~n~~~~H~~~~~~~l~~gd~vliD~G~~~~gy~sD~tRT~~v~G~~~~~~~~~y~~v~~a~~~~i~~~~pG~~~~~ 312 (440)
T 2v3z_A 233 VGSGENGCILHYTENECEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQREIYDIVLESLETSLRLYRPGTSILE 312 (440)
T ss_dssp EEEGGGGGSTTCCCCCSBCCTTCEEEEEECEEETTEECCEEEEEETTSCCCHHHHHHHHHHHHHHHHHHHHCCTTCCHHH
T ss_pred EEEcCccccccCCCCCccccCCCEEEEEeeEEECCEEEeeEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHH
Confidence 6655 4889999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HhhccC---------------------------CCCcCC-----CCceecccCCCcCCCceeecCeEEe-CCCCCCCCCC
Q psy9914 243 IESDRN---------------------------PDFDNS-----HALIWKHDNLKLKNNGSIYLHVYFT-KPVSQFGDTP 289 (383)
Q Consensus 243 i~~~~~---------------------------~~F~~~-----~~~~~h~~gl~~~n~~~L~~GmV~T-EPgiy~G~~p 289 (383)
|+++++ ++|.|+ |..+|+.|.+...++.+|++||||| |||+|+....
T Consensus 313 v~~~~~~~~~~~l~~~G~~~g~~~~~~~~~~~~~~~~Hg~GHgiGl~~he~p~~~~~~~~~L~~Gmv~tiEPgiy~~~~~ 392 (440)
T 2v3z_A 313 VTGEVVRIMVSGLVKLGILKGDVDELIAQNAHRPFFMHGLSHWLGLDVHDVGVYGQDRSRILEPGMVLTVAPGLYIAPDA 392 (440)
T ss_dssp HHHHHHHHHHHHHHHHTSSCSCHHHHHHTTTTTTTCCSCSCCBCSSSSSCCSCCCGGGCCCCCTTCEEEECCEEEECTTC
T ss_pred HHHHHHHHHHhhhhccCcccCchhhhhhhhccccccCCCCCCcCCcccccCCCcCCCCCCccCCCCEEEECCEEEeCCcc
Confidence 988743 234443 1112223333334678999999999 9977754321
Q ss_pred CCCCCCceEEEEeeccccccchhhhhhccccCCCCCCCCCCHHHHHHHHhcC
Q psy9914 290 QSLKTKLTATTTIHGVKQLNKFKRLKFQRTQNLLTGQTEASLEEIKRWIYKI 341 (383)
Q Consensus 290 ~~~~~~~~~~~~~~~~k~Ln~y~k~k~~k~~nLL~~~~~~~~eeie~~~~~~ 341 (383)
+ ..++|....+....-.|. +......||...|++.++||++|++.
T Consensus 393 ~-~~~~~~~~GvriEd~vlV------t~~G~e~LT~~~p~~~~~Ie~~~~~~ 437 (440)
T 2v3z_A 393 E-VPEQYRGIGIRIEDDIVI------TETGNENLTASVVKKPEEIEALMVAA 437 (440)
T ss_dssp S-SCGGGTTEEEECBEEEEE------ETTEEEESSTTSCCSHHHHHHHHHHH
T ss_pred c-cccccceeEEEEeeEEEE------CCCcCeECCcccCCCHHHHHHHHhcC
Confidence 1 111222211111111111 01111223334788999999999863
No 9
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei}
Probab=99.95 E-value=5.3e-28 Score=238.85 Aligned_cols=197 Identities=25% Similarity=0.332 Sum_probs=138.1
Q ss_pred ccccccchhhhhhhh-----hhcccCcc-hhhhccccccccccC-----------ccCCcCCCeEEEEEeeeecCEEece
Q psy9914 141 ALFPLLAGYAVYSLL-----YLEHKGWY-SWVLNMLYGFLLTFG-----------TTSLEDGDIVNVDVTVYLNGYHGDC 203 (383)
Q Consensus 141 ~~~pl~~g~~~~sL~-----~~~~~Gwy-Sw~~~~sf~~I~a~G-----------~~~L~~Gd~V~iDlg~~~~GY~sD~ 203 (383)
+...+..|++++++. +....|.+ ++....+|.+++++| .+.|++||+|++|+|+.++||+||+
T Consensus 86 ~~~~ikpG~te~el~~~~~~~~~~~g~~~~~~~~~~fp~iv~~g~n~~~~H~~~~~~~l~~GD~v~iD~g~~~~GY~sD~ 165 (337)
T 4fuk_A 86 ATAAAKPGITTDELDRIVHEATVERNMYPSPLNYYGFPKSVCTSVNEVICHGIPDSRELEEGDILNIDVSSYLNGFHGDL 165 (337)
T ss_dssp HHHHCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEETTEEECCCCCSCBCCTTCEEEEEEEEEETTEEEEE
T ss_pred HHHHccCCCCHHHHHHHHHHHHHHcCCCccCCCCCCcCceeeccccccccCCCCCCccccCCCEEEEecceeECCEEEee
Confidence 334456788888763 11222322 223345566665554 4899999999999999999999999
Q ss_pred eeeEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCC--------c----CC-CCceecccCC----Cc
Q psy9914 204 SATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDF--------D----NS-HALIWKHDNL----KL 266 (383)
Q Consensus 204 tRT~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F--------~----~~-~~~~~h~~gl----~~ 266 (383)
||||++|+++++++++|+++++||+++++++|||++++|+++++++.. . |+ +..+|+.+.. ..
T Consensus 166 tRT~~vG~~~~~~~~l~~~v~ea~~~ai~~~kpG~~~~di~~~~~~~~~~~g~~~~~~~~GHGIG~~~he~p~~~~~~~~ 245 (337)
T 4fuk_A 166 NETVFIGRPDDDSVRLVHAAYECLCAGIGVVKPEALYKQVGDAIEACASQYQCSVVRTYTGHGVGHLFHTSPTVCHYANN 245 (337)
T ss_dssp EEEEESSSCCHHHHHHHHHHHHHHHHHHTTCSTTCBTTHHHHHHHHHHHTTTCEECSSEEEEECSSSSSEEEEECCSCC-
T ss_pred eeeEEeCCccHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHHHHhcCCcccCcccCCCCCccccCCcccccccC
Confidence 999999999999999999999999999999999999999999864211 1 22 2222222221 23
Q ss_pred CCCceeecCeEEe-CCCCCCCCC-CCCCCCCc---------------eEEEEeeccccccchhhhhhccccCCCCCCCCC
Q psy9914 267 KNNGSIYLHVYFT-KPVSQFGDT-PQSLKTKL---------------TATTTIHGVKQLNKFKRLKFQRTQNLLTGQTEA 329 (383)
Q Consensus 267 ~n~~~L~~GmV~T-EPgiy~G~~-p~~~~~~~---------------~~~~~~~~~k~Ln~y~k~k~~k~~nLL~~~~~~ 329 (383)
++..+|++||||| |||+|+|.. .....++| ++++|.+|++.||.+++ ..|+
T Consensus 246 ~~~~~L~~GMV~TIEPgiy~~~~~~~~~~D~wt~~t~dg~~gvriEd~VlVTe~G~EvLT~~p~------------~~P~ 313 (337)
T 4fuk_A 246 KSLGMMRPGHVFTIEPMINLGTWQDVTWPDKWTSTTKDGRRSAQFEHTMVVTNGGVEIFTDWVD------------GVPT 313 (337)
T ss_dssp --CCBCCTTCEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECBEEEEECSSSEEESSCCSS------------SCCH
T ss_pred CCCCEeCCCCEEEECCeeEcCCCcceEcCCCCeEEecCCceEEEeccEEEEcCCcCEECCCCCC------------CCCC
Confidence 3457899999999 999997755 11123334 33455689998886654 5789
Q ss_pred CHHHHHHHHhcCCCCCccccch
Q psy9914 330 SLEEIKRWIYKIDPTRVNEFGY 351 (383)
Q Consensus 330 ~~eeie~~~~~~~~~~~~~~~~ 351 (383)
..+|||++....|.. ++.|=
T Consensus 314 ~~~eie~~g~~~p~~--~~~~~ 333 (337)
T 4fuk_A 314 YQKQLKEWGIMLPQR--KEVGS 333 (337)
T ss_dssp HHHHHHHHTCCCCCC--CC--C
T ss_pred CHHHHHhhCCCCCcc--cccCC
Confidence 999999997766544 44443
No 10
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A
Probab=99.95 E-value=7.2e-28 Score=249.04 Aligned_cols=207 Identities=16% Similarity=0.181 Sum_probs=140.3
Q ss_pred ceeechhHHHHHH--HHHHHHHH--HHhc-------cccccccchhhhhhhhh------hcccCcchhhhcccccccccc
Q psy9914 115 DFKDKGSYVESST--KQYDELAF--KYLS-------WALFPLLAGYAVYSLLY------LEHKGWYSWVLNMLYGFLLTF 177 (383)
Q Consensus 115 ~f~D~s~lIe~lR--ke~DEia~--kal~-------~~~~pl~~g~~~~sL~~------~~~~GwySw~~~~sf~~I~a~ 177 (383)
.+.+.++.+.++| |+.+||+. +|.. .+...+..|.+++++.. ..+.| +...+|.+|+++
T Consensus 173 ~~~~~~~~l~~~R~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~~G~tE~el~~~~~~~~~~~~G----~~~~~~~~iv~s 248 (494)
T 2iw2_A 173 NNTILHPEIVECRVFKTDMELEVLRYTNKISSEAHREVMKAVKVGMKEYELESLFEHYCYSRGG----MRHSSYTCICGS 248 (494)
T ss_dssp ECSSHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHHC----CCEESSCCEEEE
T ss_pred cchhHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHhCC----CCcCCCCceEEE
Confidence 4556777888888 77777776 2322 12223446777776531 11213 122233333332
Q ss_pred C---------------ccCCcCCCeEEEEEeeeecCEEeceeeeEee-CCCChHHHHHHHHHHHHHHHHHHhcCCCCChh
Q psy9914 178 G---------------TTSLEDGDIVNVDVTVYLNGYHGDCSATFCV-GEVDASGKFLVNVAQQALHAAISVVKPGEYFS 241 (383)
Q Consensus 178 G---------------~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~v-G~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~ 241 (383)
| .++|++||+|++|+|+.++||+||+||||++ |+++++|+++|++|++||+++++++|||+++.
T Consensus 249 G~n~~~~Hy~~~g~p~~~~l~~Gd~vliD~G~~~~gY~sDitRT~~v~G~~s~~q~~~y~~v~~a~~~~i~~~kpG~~~~ 328 (494)
T 2iw2_A 249 GENSAVLHYGHAGAPNDRTIQNGDMCLFDMGGEYYCFASDITCSFPANGKFTADQKAVYEAVLRSSRAVMGAMKPGVWWP 328 (494)
T ss_dssp GGGGGCSSCSSTTSCSCCBCCTTCEEEEEECEEBTTBCCCEEEEEETTSCCCHHHHHHHHHHHHHHHHHHHHCCTTCBHH
T ss_pred cCccccccccccCCCCCCccCCCCEEEEEeeEEECCEEEEeeEEEEECCcCCHHHHHHHHHHHHHHHHHHHHhCCCCcHH
Confidence 2 5789999999999999999999999999999 99999999999999999999999999999999
Q ss_pred hHhhccCC---------------------------CCcCCCCceecccCCC---------------------cCCCceee
Q psy9914 242 TIESDRNP---------------------------DFDNSHALIWKHDNLK---------------------LKNNGSIY 273 (383)
Q Consensus 242 di~~~~~~---------------------------~F~~~~~~~~h~~gl~---------------------~~n~~~L~ 273 (383)
||++++++ +|.|+ .+|..|+. ..++.+|+
T Consensus 329 di~~~a~~~i~~~l~~~G~~~g~~~~~~~~g~~~~~~~H~---~GHgiGl~vHd~~~~~~~~~~~~~p~~~~~~~~~~L~ 405 (494)
T 2iw2_A 329 DMHRLADRIHLEELAHMGILSGSVDAMVQAHLGAVFMPHG---LGHFLGIDVHDVGGYPEGVERIDEPGLRSLRTARHLQ 405 (494)
T ss_dssp HHHHHHHHHHHHHHHHTTSBCSCHHHHHHTTTHHHHCCSC---SCCBCSSSSSCSCSSCTTCCCCCSTTGGGCSCCCBCC
T ss_pred HHHHHHHHHHHHHHHHcCCccccHHHHHhcccccccCCCC---CcCCCCcccccCCCcccccccccccccccCCCCCEeC
Confidence 99988532 23332 12333321 13567999
Q ss_pred cCeEEe-CCCCCCCCC-----------------------CCCCCCC--ceEEEEeeccccccchhhhhhccccCCCCCCC
Q psy9914 274 LHVYFT-KPVSQFGDT-----------------------PQSLKTK--LTATTTIHGVKQLNKFKRLKFQRTQNLLTGQT 327 (383)
Q Consensus 274 ~GmV~T-EPgiy~G~~-----------------------p~~~~~~--~~~~~~~~~~k~Ln~y~k~k~~k~~nLL~~~~ 327 (383)
+||||| |||+|+... ++.++.+ .++.+|.+|++.|| ..
T Consensus 406 ~GMV~tiEPGiy~~~~~~~~~~~d~~~~~~~~~~~~~~~~g~gGvRiED~vlVte~G~e~LT----------------~~ 469 (494)
T 2iw2_A 406 PGMVLTVEPGIYFIDHLLDEALADPARASFFNREVLQRFRGFGGVRIEEDVVVTDSGIELLT----------------CV 469 (494)
T ss_dssp TTCEEEECCEEECCHHHHHHHHHCHHHHTTBCHHHHHHHTTCCEEECBEEEEECSSSEEECC----------------CC
T ss_pred CCCEEEECCccccccccchhhccccccccccccchhhhhCCCCEEEeeeEEEEcCCcCeECC----------------CC
Confidence 999999 998875310 1111111 23334445655443 67
Q ss_pred CCCHHHHHHHHhcCCCC
Q psy9914 328 EASLEEIKRWIYKIDPT 344 (383)
Q Consensus 328 ~~~~eeie~~~~~~~~~ 344 (383)
|++.++||.+|++.+|+
T Consensus 470 p~~~~~ie~~m~~~~~~ 486 (494)
T 2iw2_A 470 PRTVEEIEACMAGCDKA 486 (494)
T ss_dssp CCSHHHHHHHHTTC---
T ss_pred CCcHHHHHHHHccCCCC
Confidence 88999999999999999
No 11
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=99.94 E-value=5.6e-28 Score=230.09 Aligned_cols=138 Identities=20% Similarity=0.215 Sum_probs=105.4
Q ss_pred cCccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc----
Q psy9914 177 FGTTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD---- 252 (383)
Q Consensus 177 ~G~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~---- 252 (383)
.++++|++||+|++|+|+.++||+||+||||++|+++++++++|++|++||+++++++|||++++||++++++.+.
T Consensus 80 ~~~~~l~~Gdlv~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~l~~~v~~a~~~~i~~~kpG~~~~di~~a~~~~~~~~g~ 159 (264)
T 3tb5_A 80 PRKKVLKDGDLIKVDMCVDLKGAISDSCWSYVVGESTPEIDRLMEVTKKALYLGIEQAQVGNRIGDIGHAIQTYVEGEGY 159 (264)
T ss_dssp CCSCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHHHTTC
T ss_pred CCCccccCCCEEEEeccceecceeeecccccccCCccHHHHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHcCC
Confidence 3458999999999999999999999999999999999999999999999999999999999999999998643221
Q ss_pred --------CC-CCceecccCC----CcCCCceeecCeEEe-CCCCCCCCC-CCCCCCCc---------------eEEEEe
Q psy9914 253 --------NS-HALIWKHDNL----KLKNNGSIYLHVYFT-KPVSQFGDT-PQSLKTKL---------------TATTTI 302 (383)
Q Consensus 253 --------~~-~~~~~h~~gl----~~~n~~~L~~GmV~T-EPgiy~G~~-p~~~~~~~---------------~~~~~~ 302 (383)
|+ +..+|+.|.+ ..+++.+|++||||| |||+|+|.. .....++| ++++|.
T Consensus 160 ~~~~~~~GHgiG~~~~e~p~i~~~~~~~~~~~L~~Gmv~tiEPgiy~~~~~~~~~~d~wt~~~~~g~~gvriEd~vlVT~ 239 (264)
T 3tb5_A 160 GVVRDFVGHGIGPTIHESPMIPHYGEAGKGLRLKEGMVITIEPMVNTGTWRMKMDPNGWTAYTEDGGLSCQYEHSLAITK 239 (264)
T ss_dssp EECCSCCEEECSSSSSEEEEECSSCCTTCSCBCCTTCEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECCEEEECCT
T ss_pred ceeeeceecCCCCCCccCCccCccccCCCCCCccCCcEEEEeeeEEcCCCceEEcCCCCeEEecCCccEEEeceEEEEcC
Confidence 22 2222222222 134557999999999 999987655 22222333 223445
Q ss_pred eccccccchhhh
Q psy9914 303 HGVKQLNKFKRL 314 (383)
Q Consensus 303 ~~~k~Ln~y~k~ 314 (383)
+|++.||+++|+
T Consensus 240 ~G~e~LT~~p~e 251 (264)
T 3tb5_A 240 EGPRILTSQGEE 251 (264)
T ss_dssp TCCEETTCCSST
T ss_pred CcCEECCCCCcc
Confidence 788888876653
No 12
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1
Probab=99.94 E-value=4.4e-27 Score=236.59 Aligned_cols=224 Identities=14% Similarity=0.110 Sum_probs=153.1
Q ss_pred ceeeeeeeeeeeeccchHHhhccCCCCceeechhHHHHHH--HHHHHHHH--HHhcc-------ccccccchhhhhhhhh
Q psy9914 88 IELWKINKVLDISFAAGRKALGFIPIPDFKDKGSYVESST--KQYDELAF--KYLSW-------ALFPLLAGYAVYSLLY 156 (383)
Q Consensus 88 ie~wkvek~~~lsv~~~~~L~~~lP~~~f~D~s~lIe~lR--ke~DEia~--kal~~-------~~~pl~~g~~~~sL~~ 156 (383)
...++++. +.++...+..|++.+|..+++|.++.+..+| |+.+||+. ++... ....+..|.++.++..
T Consensus 117 ~~~i~ve~-~~~~~~~~~~l~~~~~~~~~~~~~~~i~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~tE~el~~ 195 (401)
T 1chm_A 117 ARRIGIEH-DHLNLQNRDKLAARYPDAELVDVAAACMRMRMIKSAEEHVMIRHGARIADIGGAAVVEALGDQVPEYEVAL 195 (401)
T ss_dssp CSEEEECT-TTCBHHHHHHHHHHCTTCEEEECHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHH
T ss_pred CCeEEEec-CCCCHHHHHHHHhhCCCCEEEEhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHH
Confidence 34677776 5688888889988899999999999999999 77777776 22211 1122345777776531
Q ss_pred -----hcccCcchhhhcccccc-------------ccccCccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHH
Q psy9914 157 -----LEHKGWYSWVLNMLYGF-------------LLTFGTTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKF 218 (383)
Q Consensus 157 -----~~~~GwySw~~~~sf~~-------------I~a~G~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~ 218 (383)
....|..++....+|++ -+..+.++|++||+|++|+|+.++||++|+||||++|++++++++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~n~~~~H~~~~~~~l~~gd~v~iD~G~~~~gY~sD~tRT~~~G~~~~~~~~ 275 (401)
T 1chm_A 196 HATQAMVRAIADTFEDVELMDTWTWFQSGINTDGAHNPVTTRKVNKGDILSLNCFPMIAGYYTALERTLFLDHCSDDHLR 275 (401)
T ss_dssp HHHHHHHHHHHHHCSSCCBCCCEEEEEEGGGGGSTTCCEESCBCCTTCEEEEEEECEETTEECCEEEEEEESCCCHHHHH
T ss_pred HHHHHHHHhccccCCCccccCcceeeeecccccccccCCCCCccCCCCEEEEEEEEeeCCEeecceEEEECCCCCHHHHH
Confidence 11111000000011221 122346899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCChhhHhhccC---------CCCcC----CCCceecc-c---CC--CcCCCceeecCeEEe
Q psy9914 219 LVNVAQQALHAAISVVKPGEYFSTIESDRN---------PDFDN----SHALIWKH-D---NL--KLKNNGSIYLHVYFT 279 (383)
Q Consensus 219 iy~~v~ea~~~ai~~~kPG~~~~di~~~~~---------~~F~~----~~~~~~h~-~---gl--~~~n~~~L~~GmV~T 279 (383)
+|++|++||+++++++|||++++||+++++ ++|.| +-+...|. + |+ ...++.+|++|||||
T Consensus 276 ~y~~v~~a~~~~i~~~~pG~~~~~v~~~~~~~~~~~G~~~~~~~~~GHgiG~~~h~~~~~~g~~~~~~~~~~L~~Gmv~t 355 (401)
T 1chm_A 276 LWQVNVEVHEAGLKLIKPGARCSDIARELNEIFLKHDVLQYRTFGYGHSFGTLSHYYGREAGLELREDIDTVLEPGMVVS 355 (401)
T ss_dssp HHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTCGGGBCSCSCBBCSBEETTEECCTTSBCCTTCCCBCCTTCEEE
T ss_pred HHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCcccCCCCCcccCccCCccccccCccccCCCCCccCCCCEEE
Confidence 999999999999999999999999998864 23433 22222222 2 22 234678999999999
Q ss_pred -CCCCCCCCCCCCCCCCceE----EEEeeccccccchhh
Q psy9914 280 -KPVSQFGDTPQSLKTKLTA----TTTIHGVKQLNKFKR 313 (383)
Q Consensus 280 -EPgiy~G~~p~~~~~~~~~----~~~~~~~k~Ln~y~k 313 (383)
|||+|.+.. ..+..+++. .++.+|++.||++++
T Consensus 356 iEPgiy~~~~-~~g~~GvriEd~vlVt~~G~e~LT~~p~ 393 (401)
T 1chm_A 356 MEPMIMLPEG-LPGAGGYREHDILIVNENGAENITKFPY 393 (401)
T ss_dssp ECCEEEECTT-STTCEEEECBEEEEEETTEEEECCCSCC
T ss_pred EcCeeeeccc-cCCCCeEEEeeeEEECCCcceECCCCCC
Confidence 997764321 001112222 344478998887665
No 13
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii}
Probab=99.94 E-value=4.8e-27 Score=240.47 Aligned_cols=198 Identities=16% Similarity=0.159 Sum_probs=141.1
Q ss_pred CCceeechhHHHHHH--HHHHHHHH--HHhcc-------ccccccchhhhhhhh--h-h-cccCcchhhhcccccccccc
Q psy9914 113 IPDFKDKGSYVESST--KQYDELAF--KYLSW-------ALFPLLAGYAVYSLL--Y-L-EHKGWYSWVLNMLYGFLLTF 177 (383)
Q Consensus 113 ~~~f~D~s~lIe~lR--ke~DEia~--kal~~-------~~~pl~~g~~~~sL~--~-~-~~~GwySw~~~~sf~~I~a~ 177 (383)
...+.+.+++++++| |+.+||+. +|..+ +...+..|.+++++. + . ...| ..+.+|.+++++
T Consensus 143 ~~~~~~~~~~l~~lR~iKs~~EI~~mr~A~~ia~~a~~~~~~~i~pG~tE~el~~~~~~~~~~g----~~~~~f~~IVas 218 (451)
T 3rva_A 143 NVNPDRVLHYLHYQRAYKTDYELDCMREANKLAVAGHKAAEQAFREGKSEFDINLAYAAASRQG----DNDVPYTSIVAL 218 (451)
T ss_dssp CBSCHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTCC----TTTSSSCCEEEE
T ss_pred ccCchHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHcC----CCcCCcCcEEEE
Confidence 356778888999999 88888777 33222 222345677777754 2 1 1223 234566777766
Q ss_pred Cc-----------c-CCcCCCeEEEEEeeeecCEEeceeeeEeeCCC--ChHHHHHHHHHHHHHHHHHHhcCCCCChhhH
Q psy9914 178 GT-----------T-SLEDGDIVNVDVTVYLNGYHGDCSATFCVGEV--DASGKFLVNVAQQALHAAISVVKPGEYFSTI 243 (383)
Q Consensus 178 G~-----------~-~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~--s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di 243 (383)
|. + .+++||+|++|+|+.++||+||+||||++|++ +++++++|++|++||+++++++|||++++||
T Consensus 219 G~naa~~H~~~~~~~~l~~GdlVliD~G~~~~GY~sDiTRT~~vG~~~~~~~~~~ly~~vl~aq~aai~~ikPG~~~~di 298 (451)
T 3rva_A 219 NEHASILHYMQCDTVAPKESRSFLIDAGANYHGYAADITRTYAQEGVHNSAMFRDLIQAVDKVTLTLVDSLKPGVAYTDI 298 (451)
T ss_dssp GGGGGCTTCCCCCSSCCSSCCEEEEEEEEEETTEEEEEEEEEECTTSTTHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHH
T ss_pred CCcccccCCCCCCCcccCCCCEEEEEeeEEECCEEEEeEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHH
Confidence 63 3 46899999999999999999999999999997 7899999999999999999999999999999
Q ss_pred hhccC---------------------------CCCcCC-----CCceecccCCC----------------cCCCceeecC
Q psy9914 244 ESDRN---------------------------PDFDNS-----HALIWKHDNLK----------------LKNNGSIYLH 275 (383)
Q Consensus 244 ~~~~~---------------------------~~F~~~-----~~~~~h~~gl~----------------~~n~~~L~~G 275 (383)
+++++ ++|.|+ |..+|..|++. +++..+|++|
T Consensus 299 ~~aa~~~i~~~l~~~G~~~~~~~~~~~~g~~~~~f~H~~GHgiGldvHe~p~~~~~~~g~~~~~~~~~~~l~~~~~L~~G 378 (451)
T 3rva_A 299 HLLAHDGIAQILHDTGMVNLTPPEIVEMGITRTFFPHGIGHFLGLQVHDVGGLVNDDRGTPKPAPDDHPFLRCTRMVEAR 378 (451)
T ss_dssp HHHHHHHHHHHHHHTTSBCSCHHHHHHTTTHHHHCCSCSCCBCSSSSSCTTTTBSSTTCCBCCCCTTCTTCCCCCBCCTT
T ss_pred HHHHHHHHHHHHHhcCCccccHHHHHhcCcccccCCCCCcccccCCcccCccccccccccccccccccccCCCCCCcCCC
Confidence 98742 245553 22233333221 1456799999
Q ss_pred eEEe-CCCCCCCCC----------------------CCCCCCC--ceEEEEeeccccccchhhh
Q psy9914 276 VYFT-KPVSQFGDT----------------------PQSLKTK--LTATTTIHGVKQLNKFKRL 314 (383)
Q Consensus 276 mV~T-EPgiy~G~~----------------------p~~~~~~--~~~~~~~~~~k~Ln~y~k~ 314 (383)
|||| |||||++.. ++.++.+ .++.+|.+|++.||+.+++
T Consensus 379 MV~TIEPGiY~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gGvRIED~vlVT~~G~e~LT~~~~~ 442 (451)
T 3rva_A 379 QVFTIEPGLYFIDSLLRDLKATPASKYINWDTIDAYKPFGGIRIEDNIIVHRDKNENMTRDLDL 442 (451)
T ss_dssp CEEEECCEEECCHHHHHHHHTSGGGGGBCHHHHHHHGGGCEEECBEEEEECSSCEEEHHHHTTC
T ss_pred CEEEECCEEeEchhhhhhhcccccccccccchhhhcCCCCEEEcccEEEECCCcceECCCCCCc
Confidence 9999 999887521 1111222 2335566899999988876
No 14
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1
Probab=99.93 E-value=1.2e-26 Score=232.75 Aligned_cols=225 Identities=12% Similarity=0.117 Sum_probs=155.0
Q ss_pred ceeeeeeeeeeeeccchHHhhccCCCCceeechhHHHHHH--HHHHHHHH--HHhc-------cccccccchhhhhhhhh
Q psy9914 88 IELWKINKVLDISFAAGRKALGFIPIPDFKDKGSYVESST--KQYDELAF--KYLS-------WALFPLLAGYAVYSLLY 156 (383)
Q Consensus 88 ie~wkvek~~~lsv~~~~~L~~~lP~~~f~D~s~lIe~lR--ke~DEia~--kal~-------~~~~pl~~g~~~~sL~~ 156 (383)
...++++. +.++...+..|++.+|+.++++.+++++.+| |+.+||+. ++.. .....+..|.++.++..
T Consensus 117 ~~~igvd~-~~~~~~~~~~l~~~l~~~~~v~~~~~i~~lR~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~te~el~~ 195 (402)
T 1kp0_A 117 AKZIGIEH-DHVTLBHRRZLZKALPGTEFVDVGZPVMWZRVIKSSEEZBLIRZGARISDIGGAATAAAISAGVPEYEVAI 195 (402)
T ss_dssp CSEEEECT-TTCBHHHHHHHHHHSTTCEEEECHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHH
T ss_pred CCEEEEec-CCCCHHHHHHHHHhCCCCEEEECHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 34677876 5688888889988889889999999999999 77777776 2221 12223445777776531
Q ss_pred -----hcccCcchhhhccccc--ccc-----------ccCccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHH
Q psy9914 157 -----LEHKGWYSWVLNMLYG--FLL-----------TFGTTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKF 218 (383)
Q Consensus 157 -----~~~~GwySw~~~~sf~--~I~-----------a~G~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~ 218 (383)
....|..++..+.+|+ +++ .++.++|++||+|++|+|+.|+||++|+||||++|++++++++
T Consensus 196 ~~~~~~~~~g~~~~~~~~~~~~~~iv~~g~n~~~~H~~~~~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~ 275 (402)
T 1kp0_A 196 ATTBAMVRZIARBFPYVELMDTWIWFQSGINTDGAHNPVTBRVVZRGDILSLNCFPMIFGYYTALERTLFLZZVBDASLZ 275 (402)
T ss_dssp HHHHHHHHHHHHHSSSCEEEEEEEEEEEGGGGGSTTCCEECCBCCTTCEEEEEEEEEETTEECCEEEEEEESCCCHHHHH
T ss_pred HHHHHHHHhcccccCcccccCccceeecccccccccCCCCCcccCCCCEEEEEEEeeECCEeeecEEEEEcCCCCHHHHH
Confidence 1111100000000111 112 2346899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCChhhHhhccCC---------CCcCC----CCceecccCC------CcCCCceeecCeEEe
Q psy9914 219 LVNVAQQALHAAISVVKPGEYFSTIESDRNP---------DFDNS----HALIWKHDNL------KLKNNGSIYLHVYFT 279 (383)
Q Consensus 219 iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~---------~F~~~----~~~~~h~~gl------~~~n~~~L~~GmV~T 279 (383)
+|++|++||+++++++|||++++||++++++ +|.|+ -+...|..+. ...++.+|++|||||
T Consensus 276 ~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~~~G~~~~~~~~~GHgiG~~~He~~~~~g~~~~~~~~~~l~~Gmv~t 355 (402)
T 1kp0_A 276 IWZKNTAVHRRGLZLIKPGARCKDIASELNBMYRZWDLLRYRTFGYGHSFGVLBHYYGREAGVELREDIZTVLEPGMVVS 355 (402)
T ss_dssp HHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCGGGBCSCSCBBCEEEETTEECCTTCBCCTTCCCBCCTTCEEE
T ss_pred HHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCeecCCCcccccCCccccCCcccCcccCCCCCCccCCCcEEE
Confidence 9999999999999999999999999998642 34332 1122233221 234678999999999
Q ss_pred -CCCCCCCCCCCCCCCCceE----EEEeeccccccchhhh
Q psy9914 280 -KPVSQFGDTPQSLKTKLTA----TTTIHGVKQLNKFKRL 314 (383)
Q Consensus 280 -EPgiy~G~~p~~~~~~~~~----~~~~~~~k~Ln~y~k~ 314 (383)
|||+|.+.. ..+..+++. .++.+|++.||+++++
T Consensus 356 iEPgiy~~~~-~~~~~G~ried~v~Vt~~g~e~Lt~~p~~ 394 (402)
T 1kp0_A 356 MEPMVMBPEG-EPGAGGYREHDILVIKENBTENITGFPFG 394 (402)
T ss_dssp ECCEEEECTT-STTCEEEECBEEEEEETTEEEECCCSCCS
T ss_pred ECCceeecCc-cCCCCcEEEEEEEEEcCCcceECCCCCCc
Confidence 997764321 001122222 3445799999988764
No 15
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114}
Probab=99.93 E-value=2.3e-26 Score=236.62 Aligned_cols=215 Identities=13% Similarity=0.086 Sum_probs=152.1
Q ss_pred ceeeeeeeeeeeeccchHHhhccCCCCceeechhHHHHHH--HHHHHHHH--HHhcc-------ccccccchh-----hh
Q psy9914 88 IELWKINKVLDISFAAGRKALGFIPIPDFKDKGSYVESST--KQYDELAF--KYLSW-------ALFPLLAGY-----AV 151 (383)
Q Consensus 88 ie~wkvek~~~lsv~~~~~L~~~lP~~~f~D~s~lIe~lR--ke~DEia~--kal~~-------~~~pl~~g~-----~~ 151 (383)
...+++++ .++..+..|++ ++++++|.+++++.+| |+.+||+. +|... ...-+..|. ++
T Consensus 193 ~~~igve~---~~~~~~~~L~~--~~~~~vd~~~~v~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~~~~~~tE 267 (470)
T 4b28_A 193 LRRLAVDK---VMLHGLRALQA--QGFEIMDGEEVTEKARSVKGPDEIRAMRCASHACEVAVRKMEDFARSKVGDGVTCE 267 (470)
T ss_dssp CCEEEESS---CCHHHHHHHHH--TTCEEEEHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCBH
T ss_pred CceeeeCc---chHHHHHHHHc--CCCEEEEcHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCH
Confidence 46778886 24556777766 4789999999999999 88888777 33222 122344567 77
Q ss_pred hhhh----h-hcccCcchhhhcccccccc-----------ccCccCCcCCCeEEEEEeee-ecCEEeceeeeEeeC--CC
Q psy9914 152 YSLL----Y-LEHKGWYSWVLNMLYGFLL-----------TFGTTSLEDGDIVNVDVTVY-LNGYHGDCSATFCVG--EV 212 (383)
Q Consensus 152 ~sL~----~-~~~~GwySw~~~~sf~~I~-----------a~G~~~L~~Gd~V~iDlg~~-~~GY~sD~tRT~~vG--~~ 212 (383)
.++. . ....|.. .++.+++ ..+.++|++||+|++|+|+. ++|||||+||||++| ++
T Consensus 268 ~el~~~l~~~~~~~G~~-----~~~~~ivasG~n~~~~H~~~~~~~l~~Gd~vliD~G~~g~~GY~sDitRT~~vG~~~~ 342 (470)
T 4b28_A 268 NDIWAILHSENVRRGGE-----WIETRLLASGPRSNPWFQECGPRVCQRNEIISFDTDLVGAYGICTDISRSWWIGDQKP 342 (470)
T ss_dssp HHHHHHHHHHHHTTTCC-----EESCCCEEEGGGGSSTTCCCCSCBCCSSEEEEEECCEECGGGCEECCEEEEEESSSCC
T ss_pred HHHHHHHHHHHHHcCCC-----cCCCceeEEcCccccCCCCCCCccccCCCEEEEEecccccCeEEEeeEEEEEECCCCC
Confidence 7653 1 2223311 1122233 33468999999999999998 999999999999999 69
Q ss_pred ChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc-----------CCCCceecccCCC-------cCCCceeec
Q psy9914 213 DASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD-----------NSHALIWKHDNLK-------LKNNGSIYL 274 (383)
Q Consensus 213 s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~-----------~~~~~~~h~~gl~-------~~n~~~L~~ 274 (383)
+++++++|++|++||+++++++|||++++||++++++.+. |+.+++|+.|.+. .+++.+|++
T Consensus 343 s~~~~~~y~~v~~a~~a~i~~ikpG~~~~di~~~ar~~i~~~~~~~~~~~GHGIGl~HE~P~i~~~~~~~~~~~~~~L~~ 422 (470)
T 4b28_A 343 RADMIYAMQHGVEHIRTNMEMLKPGVMIPELSANTHVLDAKFQKQKYGCLMHGVGLCDEWPLVAYPDHAVAGAYDYPLEP 422 (470)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHTCCCCCHHHHTTCCSCSEEEESSSEEEEEECCTTTCCTTSSCCBCCT
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHhhhcCCCCccCCCCcCCCCCcccCccccccCCCCCEECC
Confidence 9999999999999999999999999999999999875332 2322344445443 246789999
Q ss_pred CeEEe-CCCCCCCCCCCCCCCCc--eEEEEeeccccccchhhh
Q psy9914 275 HVYFT-KPVSQFGDTPQSLKTKL--TATTTIHGVKQLNKFKRL 314 (383)
Q Consensus 275 GmV~T-EPgiy~G~~p~~~~~~~--~~~~~~~~~k~Ln~y~k~ 314 (383)
||||| |||+|.- |+..+.+. ...++.+|++.||+++++
T Consensus 423 GMV~tiEPgiy~~--~g~~GvriEd~vlVte~G~e~LT~~p~~ 463 (470)
T 4b28_A 423 GMTLCVEALISEE--GGDFSIKLEDQVLITEDGYENLTKYPFD 463 (470)
T ss_dssp TCEEEEEEEEECT--TCSCEEEEEEEEEECSSSEEECCCCCCC
T ss_pred CCEEEEcCeeecC--CCcEEEEEeeEEEEeCCcCeECCCCCCc
Confidence 99999 9966530 22212222 234555899999988764
No 16
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=99.93 E-value=2.3e-25 Score=212.14 Aligned_cols=140 Identities=25% Similarity=0.342 Sum_probs=109.2
Q ss_pred cCccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCC-----
Q psy9914 177 FGTTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDF----- 251 (383)
Q Consensus 177 ~G~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F----- 251 (383)
+++++|++||+|++|+|+.++||+||+||||++|+++++++++|+++++||+++++++|||++++||++++++.+
T Consensus 84 p~~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~ 163 (262)
T 3mx6_A 84 PNDKPLKNGDIVNIDVTVILDGWYGDTSRMYYVGDVAIKPKRLIQVTYDAMMKGIEVVRPGAKLGDIGYAIQSYAEKHNY 163 (262)
T ss_dssp CCSCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCSTTCBHHHHHHHHHHHHHHTTC
T ss_pred CCCcccCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCC
Confidence 345899999999999999999999999999999999999999999999999999999999999999999865322
Q ss_pred ---c----CC-CCceecccCC----CcCCCceeecCeEEe-CCCCCCCCC-CCC-CCCCc---------------eEEEE
Q psy9914 252 ---D----NS-HALIWKHDNL----KLKNNGSIYLHVYFT-KPVSQFGDT-PQS-LKTKL---------------TATTT 301 (383)
Q Consensus 252 ---~----~~-~~~~~h~~gl----~~~n~~~L~~GmV~T-EPgiy~G~~-p~~-~~~~~---------------~~~~~ 301 (383)
. |+ +..+|+.|.+ ..+++.+|++||||| |||+|+|.. .+. .+++| ++.+|
T Consensus 164 ~~~~~~~GHgiG~~~hE~p~i~~~~~~~~~~~L~~Gmv~tiEPgiy~g~~gvri~~~d~w~~~~~~~~~~~~~Ed~v~Vt 243 (262)
T 3mx6_A 164 SVVRDYTGHGIGRVFHDKPSILNYGRNGTGLTLKEGMFFTVEPMINAGNYDTILSKLDGWTVTTRDKSLSAQFEHTIGVT 243 (262)
T ss_dssp EECCSCCEEECSSSSSEEEEECSSCCTTCSCBCCTTCEEEECCEEESSCSCEEECTTTSCCEEETTCCCEEECBEEEEEC
T ss_pred ccCCCccccccCCcccCCCcccccCCCCCCCEeCCCCEEEEeCEEEcCCCeEEEecCCCceEEecCCCceeeeceEEEEC
Confidence 1 22 2222232322 234678999999999 999987644 222 23444 23455
Q ss_pred eeccccccchhhhhh
Q psy9914 302 IHGVKQLNKFKRLKF 316 (383)
Q Consensus 302 ~~~~k~Ln~y~k~k~ 316 (383)
.+|++.||+++|+-+
T Consensus 244 ~~G~e~LT~~p~~l~ 258 (262)
T 3mx6_A 244 KDGFEIFTLSPKKLD 258 (262)
T ss_dssp SSSEEESCCCTTCCC
T ss_pred CCcCeECCCCCcccC
Confidence 589999999888643
No 17
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A*
Probab=99.92 E-value=2.3e-25 Score=231.20 Aligned_cols=170 Identities=18% Similarity=0.203 Sum_probs=124.4
Q ss_pred CCCceeechhHHHHHH--HHHHHHHH--HHhcc-------ccccccchhhhhhhh--h-hc-ccCcchhhhccccccccc
Q psy9914 112 PIPDFKDKGSYVESST--KQYDELAF--KYLSW-------ALFPLLAGYAVYSLL--Y-LE-HKGWYSWVLNMLYGFLLT 176 (383)
Q Consensus 112 P~~~f~D~s~lIe~lR--ke~DEia~--kal~~-------~~~pl~~g~~~~sL~--~-~~-~~GwySw~~~~sf~~I~a 176 (383)
....++|.++.++++| |+.+||+. +|..+ +...+..|.+++++. + .. ..| ..+.+|.++++
T Consensus 142 ~~~~~~~~~~~l~~lR~iKs~~EIe~mR~A~~ia~~a~~~~~~~ikpG~tE~el~~~~~~~~~~g----~~~~sf~~IVa 217 (517)
T 3l24_A 142 ELMNPEPVMNFYHYHRAYKTQYELACMREANKIAVQGHKAARDAFFQGKSEFEIQQAYLLATQHS----ENDNPYGNIVA 217 (517)
T ss_dssp CCBSCHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTCC----GGGSSSCCEEE
T ss_pred ccCCchhHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHcC----CCcCCcCCEEE
Confidence 3456778889999999 88888777 33222 222345677777754 2 11 223 23456777776
Q ss_pred cCc-----------c-CCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHh
Q psy9914 177 FGT-----------T-SLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIE 244 (383)
Q Consensus 177 ~G~-----------~-~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~ 244 (383)
+|. + .+++||+|++|+|+.++||+||+||||++|++ ++++++|++|++||+++++++|||++++||+
T Consensus 218 sG~naa~~H~~p~~~~~l~~GDlVliD~G~~~~GY~sDiTRT~~vG~~-~e~~~ly~~vl~Aq~aai~~ikPGv~~~dI~ 296 (517)
T 3l24_A 218 LNENCAILHYTHFDRVAPATHRSFLIDAGANFNGYAADITRTYDFTGE-GEFAELVATMKQHQIALMNQLAPGKLYGELH 296 (517)
T ss_dssp EGGGGGCTTCCCCCSSCCSSCCEEEEEEEEEETTEEEEEEEEEESSSC-SHHHHHHHHHHHHHHHHHTTCCTTCBHHHHH
T ss_pred EccccccccCCCCCCccccCCCEEEEeecEEECCEEEEeEEEEEcCCC-HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHH
Confidence 663 3 47899999999999999999999999999985 7899999999999999999999999999999
Q ss_pred hccC---------------------------CCCcCC-----CCceecccCCC----------------cCCCceeecCe
Q psy9914 245 SDRN---------------------------PDFDNS-----HALIWKHDNLK----------------LKNNGSIYLHV 276 (383)
Q Consensus 245 ~~~~---------------------------~~F~~~-----~~~~~h~~gl~----------------~~n~~~L~~Gm 276 (383)
++++ ++|.|+ |..+|..|++. +++..+|++||
T Consensus 297 ~aa~~~i~~~L~~~G~~~~~~~~~~~~g~~~~~f~HglGHgiGLdvHE~p~~~~~~~g~~~~~~~~~p~l~~~~~Le~GM 376 (517)
T 3l24_A 297 LDCHQRVAQTLSDFNIVDLSADEIVAKGITSTFFPHGLGHHIGLQVHDVGGFMADEQGAHQEPPEGHPFLRCTRKIEANQ 376 (517)
T ss_dssp HHHHHHHHHHHHHTTSBSSCHHHHHHTTCGGGTCCSCSCCBCSSSSSCCCCTTC---------------CCTTCBCCTTE
T ss_pred HHHHHHHHHHHHhcCCccccHHHHHhcCcccccCCCCCCCCCCcccccCccccccccccccccccccccCCCCccccCCc
Confidence 8642 345553 22223333221 14567999999
Q ss_pred EEe-CCCCCCC
Q psy9914 277 YFT-KPVSQFG 286 (383)
Q Consensus 277 V~T-EPgiy~G 286 (383)
||| |||+|++
T Consensus 377 V~TIEPGiY~~ 387 (517)
T 3l24_A 377 VFTIEPGLYFI 387 (517)
T ss_dssp EEEECCEEECC
T ss_pred EEEECCEEeec
Confidence 999 9998875
No 18
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A*
Probab=99.92 E-value=9.6e-26 Score=230.75 Aligned_cols=224 Identities=12% Similarity=0.033 Sum_probs=150.5
Q ss_pred eeeeeeeeeeeeccchHHhhccC------CCCceeechhHHHHHH--HHHHHHHH--HHhcc-------ccccccc----
Q psy9914 89 ELWKINKVLDISFAAGRKALGFI------PIPDFKDKGSYVESST--KQYDELAF--KYLSW-------ALFPLLA---- 147 (383)
Q Consensus 89 e~wkvek~~~lsv~~~~~L~~~l------P~~~f~D~s~lIe~lR--ke~DEia~--kal~~-------~~~pl~~---- 147 (383)
..++++..+.++...+..|++.+ ++.++++.+++++.+| |+.+||+. +|... ...-+..
T Consensus 131 ~~Igv~~~~~~s~~~~~~L~~~l~~~~~~~~~~lv~~~~~i~~lr~iK~~~Ei~~~r~A~~i~~~a~~~~~~~i~~~i~~ 210 (467)
T 3biq_A 131 KTVGIPEKDSYQGKFMTEWNPVWEAAVKENEFNVIDISLGLSKVWEVKDVNEQAFLSVSSKGSDKFMDLLSNEMVRAVDE 210 (467)
T ss_dssp SEEEECTTCCCCSHHHHHHHHHHHHHHHHHTCEEEECHHHHHHHTCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CEEEEecCcccchhHHHHHHHHHHhhcccCCceeechHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 46776421467888888887766 4678999999999999 77777776 22211 1111222
Q ss_pred --hhhhhhhh----h-hcc-----cC-------------cchhhhcccccccccc------------CccCCcCCCeEEE
Q psy9914 148 --GYAVYSLL----Y-LEH-----KG-------------WYSWVLNMLYGFLLTF------------GTTSLEDGDIVNV 190 (383)
Q Consensus 148 --g~~~~sL~----~-~~~-----~G-------------wySw~~~~sf~~I~a~------------G~~~L~~Gd~V~i 190 (383)
|.++.++. . ... .| ..+-..+.+|.+++++ +.++|++||+|++
T Consensus 211 g~g~te~el~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~f~~iv~~G~n~~~~~H~~~~~~~l~~gd~v~i 290 (467)
T 3biq_A 211 ELKITNAKLSDKIENKIDDVKFLKQLSPDLSALCPPNYKFNFDLLDWTYSPIIQSGKKFDLRVSARSTNDQLYGNGCILA 290 (467)
T ss_dssp TCCCBHHHHHHHHHHGGGCHHHHHHHHHHHHTTSCTTCCCCGGGEEESSCCEEECTTCCCCSTTCCCCSSBCCCSEEEEE
T ss_pred cCCccHHHHHHHHHHHHHhhhhhhcCCccccccccccccCCcccccCCCCCeEEecCCcceeeccCCCCCccCCCCEEEE
Confidence 56666543 1 111 22 1100112344444433 3588999999999
Q ss_pred EEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHHHHh-cCCCCChhhHhhccC-----------CCCcCC----
Q psy9914 191 DVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISV-VKPGEYFSTIESDRN-----------PDFDNS---- 254 (383)
Q Consensus 191 Dlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ai~~-~kPG~~~~di~~~~~-----------~~F~~~---- 254 (383)
|+|+.|+||+||+||||++| ++++++++|++|++||++++++ +|||++++||+++++ ++|.|+
T Consensus 291 D~g~~~~gy~sD~tRT~~~g-~~~~~~~~~~~v~~a~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~g~~~~~~h~~GHg 369 (467)
T 3biq_A 291 SCGIRYNNYCSNITRTFLID-PSEEMANNYDFLLTLQKEIVTNILKPGRTPKEVYESVIEYIEKTKPELVPNFTKNIGSL 369 (467)
T ss_dssp EECEEETTEECCEEEEEEES-CCHHHHHHHHHHHHHHHHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGGGGBCSCCEEE
T ss_pred EEeEEECCEEeeeeEEEEeC-CCHHHHHHHHHHHHHHHHHHHhCCcCCCcHHHHHHHHHHHHHHhCcchhhcCCCCcccc
Confidence 99999999999999999999 8999999999999999999999 999999999999853 345442
Q ss_pred -CCceecccC-CCcCC-CceeecCeEEe-CCCCC-CCCCCC-CCCCCc----eEEEE--eecccccc-chhhh
Q psy9914 255 -HALIWKHDN-LKLKN-NGSIYLHVYFT-KPVSQ-FGDTPQ-SLKTKL----TATTT--IHGVKQLN-KFKRL 314 (383)
Q Consensus 255 -~~~~~h~~g-l~~~n-~~~L~~GmV~T-EPgiy-~G~~p~-~~~~~~----~~~~~--~~~~k~Ln-~y~k~ 314 (383)
|..+|+.|. +..++ +.+|++||||| |||+| . ..|+ ++..+. ...++ ..|++.|| .++++
T Consensus 370 iGl~~hE~p~~~~~~~~~~~l~~Gmv~tiEPgiy~~-~~~~~~g~~gvriEd~v~Vt~~~~G~e~Lt~~~p~~ 441 (467)
T 3biq_A 370 IGLEFRDSNFILNVKNDYRKIQRGDCFNISFGFNNL-KDSQSANNYALQLADTVQIPLDETEPPRFLTNYTKA 441 (467)
T ss_dssp CSSSSCCGGGBSSTTCCSCCCCTTCEEEEEEEEEEE-CCSSCSSCEEEEEEEEEECCSSTTSCCEESCCSCCC
T ss_pred cccccccCCccCCCCCCCCccCCCCEEEEeCeEEee-ecCCCCCccEEEEEEEEEEecCCCCcEEecccCCCC
Confidence 223333342 45566 88999999999 99887 3 1233 211121 12334 45677777 66554
No 19
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=99.91 E-value=2.6e-25 Score=211.89 Aligned_cols=111 Identities=26% Similarity=0.396 Sum_probs=91.7
Q ss_pred CccC-CcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCC-----
Q psy9914 178 GTTS-LEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDF----- 251 (383)
Q Consensus 178 G~~~-L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F----- 251 (383)
++++ |++||+|++|+|+.++||+||+||||++|+++++++++|+++++||+++++++|||++++||++++++.+
T Consensus 93 ~~~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~~~~~v~~~~~~~~~~~G~ 172 (262)
T 1o0x_A 93 LKEKVFKEGDIVSVDVGAVYQGLYGDAAVTYIVGETDERGKELVRVTREVLEKAIKMIKPGIRLGDVSHCIQETVESVGF 172 (262)
T ss_dssp CTTCBCCTTCEEEEEEEEEETTEEEEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHTCCTTSBHHHHHHHHHHHHHHTTC
T ss_pred CCCcccCCCCEEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCC
Confidence 4578 9999999999999999999999999999999999999999999999999999999999999999965322
Q ss_pred ---c----CC-CCceecccCCC----cCCCceeecCeEEe-CCCCCCCCC
Q psy9914 252 ---D----NS-HALIWKHDNLK----LKNNGSIYLHVYFT-KPVSQFGDT 288 (383)
Q Consensus 252 ---~----~~-~~~~~h~~gl~----~~n~~~L~~GmV~T-EPgiy~G~~ 288 (383)
. |+ +..+|+.|.+. .+++.+|++||||| |||+|.|..
T Consensus 173 ~~~~~~~GHgiG~~~he~p~i~~~~~~~~~~~L~~Gmv~tiEPgi~~g~~ 222 (262)
T 1o0x_A 173 NVIRDYVGHGVGRELHEDPQIPNYGTPGTGVVLRKGMTLAIEPMVSEGDW 222 (262)
T ss_dssp EECCSSCEEECSSSSSEEEEECSCCCTTCSCBCCTTCEEEECCEEESSCC
T ss_pred cccCCcccCcccccccCCCccCCCCCCCCCCccCCCCEEEECCEEEcCCC
Confidence 2 22 22223333221 24578999999999 999887644
No 20
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus}
Probab=99.91 E-value=1.4e-25 Score=216.58 Aligned_cols=134 Identities=23% Similarity=0.320 Sum_probs=102.8
Q ss_pred ccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCC----c-C
Q psy9914 179 TTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDF----D-N 253 (383)
Q Consensus 179 ~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F----~-~ 253 (383)
.++|++||+|++|+|+.++||+||+||||++|+++++++++|++|++||+++++++|||++++||++++++.+ . +
T Consensus 113 ~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~~~~~i~~~~~~~~~~~~~~~ 192 (286)
T 3tav_A 113 TAVLADGDLVSIDCGAILDGWHGDSAWTFAVGTVIPSDEALSEATRLSMEAGIAAMIPGNRLTDVSHAIELGTRAAEKQF 192 (286)
T ss_dssp TCBCCTTCEEEEEEEEEETTEEEEEEEEEESSSCCHHHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHHHHHHHH
T ss_pred CcccCCCCEEEEEEEEEECCEEEeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 5899999999999999999999999999999999999999999999999999999999999999999865444 2 1
Q ss_pred --C----CCceecccCC--------C----cCCCceeecCeEEe-CCCCCCCCC-CCCCCCCce---------------E
Q psy9914 254 --S----HALIWKHDNL--------K----LKNNGSIYLHVYFT-KPVSQFGDT-PQSLKTKLT---------------A 298 (383)
Q Consensus 254 --~----~~~~~h~~gl--------~----~~n~~~L~~GmV~T-EPgiy~G~~-p~~~~~~~~---------------~ 298 (383)
+ ....+|..|+ . .+++.+|++||||| |||+|.+.. ....+++|. .
T Consensus 193 ~~g~~~~~~~~GHgiG~~~hE~P~i~~~~~~~~~~~L~~GmV~tiEPgiy~~~~~~~~~~~~w~~~t~dg~~gvriEd~v 272 (286)
T 3tav_A 193 DRAFGIVDGYGGHGIGRSMHLDPFLPNEGAPGKGPLLAVGSVLAIEPMLTLGTTQTRVLADDWTVVTTDGSRAAHWEHTV 272 (286)
T ss_dssp TCCCEECTTCCEEECSSSSSEEEEECSSCCSSCSSBCCTTBEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECBEEE
T ss_pred cCCCcccCCcccCcccccccCCccccCcCCCCCCCCcCCCCEEEEcCEEEcCCCceEecCCCceEEecCCCcEEEeeeEE
Confidence 1 1123444443 2 23568999999999 998886532 101122332 2
Q ss_pred EEEeeccccccchh
Q psy9914 299 TTTIHGVKQLNKFK 312 (383)
Q Consensus 299 ~~~~~~~k~Ln~y~ 312 (383)
.++.+|++.||+++
T Consensus 273 ~Vt~~G~e~LT~~p 286 (286)
T 3tav_A 273 AVTEAGPRILTMRP 286 (286)
T ss_dssp ECCTTSCEESSCCC
T ss_pred EECCCcceeCCCCC
Confidence 34447889888764
No 21
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A
Probab=99.91 E-value=6.8e-25 Score=222.78 Aligned_cols=171 Identities=13% Similarity=0.078 Sum_probs=122.0
Q ss_pred CCCceeechhHHHHHH--HHHHHHHH--HHhcccc------------ccccch--hhhhhhh----h-hcc--------c
Q psy9914 112 PIPDFKDKGSYVESST--KQYDELAF--KYLSWAL------------FPLLAG--YAVYSLL----Y-LEH--------K 160 (383)
Q Consensus 112 P~~~f~D~s~lIe~lR--ke~DEia~--kal~~~~------------~pl~~g--~~~~sL~----~-~~~--------~ 160 (383)
|..+++|.++.+..+| |+.+||+. +|....+ ..+..| .++.++. . ... .
T Consensus 160 ~~~~~~~~~~~i~~~r~iK~~~Ei~~~r~A~~i~~~a~~~~~~~~~~~~i~~G~~~te~el~~~~~~~~~~~~~~~g~~~ 239 (444)
T 3cb6_A 160 SEFNLVDASLGLAKCLAIKDEQELANIKGASRVSVAVMSKYFVDELSTYIDQGKKITHSKFSDQMESLIDNEAFFQTKSL 239 (444)
T ss_dssp GGSEEEECHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCBHHHHHHHHHGGGGCHHHHTCGGG
T ss_pred CCceEeecHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCHHHHHHHHHHHHHHhcccccccc
Confidence 5578999999999999 77778776 2322111 112345 5666542 1 111 1
Q ss_pred C--cch-hhhccccccccccC------------ccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHH
Q psy9914 161 G--WYS-WVLNMLYGFLLTFG------------TTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQ 225 (383)
Q Consensus 161 G--wyS-w~~~~sf~~I~a~G------------~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~e 225 (383)
| .+. .....+|.+++++| .++|+ ||+|++|+|+.|+||+||+||||++| ++++++++|++|++
T Consensus 240 ga~~~~~~~~~~~f~~iv~~g~n~~~~~H~~~~~~~l~-gd~v~iD~g~~~~gy~sD~tRT~~v~-~~~~~~~~y~~v~~ 317 (444)
T 3cb6_A 240 KLGDIDLDQLEWCYTPIIQSGGSYDLKPSAITDDRNLH-GDVVLCSLGFRYKSYCSNVGRTYLFD-PDSEQQKNYSFLVA 317 (444)
T ss_dssp CCTTCCGGGEEESSCCEEECTTCCCCSTTCCCCSSBCC-SSEEEEEECEEETTEECCEEEEEEES-CCHHHHHHHHHHHH
T ss_pred ccccccccccccccCceEeccCCcCceeccCCCCCccc-CCEEEEEEeEeeCCEeeeeeEEEEec-CCHHHHHHHHHHHH
Confidence 1 010 01134444554443 47887 99999999999999999999999998 89999999999999
Q ss_pred HHHHHHHhcCCCCChhhHhhccC-----------CCCcCC-----CCceeccc-CCCcCCCceeecCeEEe-CCCCC
Q psy9914 226 ALHAAISVVKPGEYFSTIESDRN-----------PDFDNS-----HALIWKHD-NLKLKNNGSIYLHVYFT-KPVSQ 284 (383)
Q Consensus 226 a~~~ai~~~kPG~~~~di~~~~~-----------~~F~~~-----~~~~~h~~-gl~~~n~~~L~~GmV~T-EPgiy 284 (383)
||+++++++|||++++||+++++ .+|.|+ |..+|+.| .+..+++.+|++||||| |||+|
T Consensus 318 a~~~~~~~~~pG~~~~~v~~~~~~~~~~~~~g~~~~~~h~~GHgiGl~~he~p~~~~~~~~~~l~~Gmv~tiEPgiy 394 (444)
T 3cb6_A 318 LQKKLFEYCRDGAVIGDIYTKILGLIRAKRPDLEPNFVRNLGAGIGIEFRESSLLVNAKNPRVLQAGMTLNLSIGFG 394 (444)
T ss_dssp HHHHHHHHCSTTCBHHHHHHHHHHHHHHHCGGGGGGBCSCCEEECSSSSCBGGGCCSTTCCCBCCTTCEEEEEEEEE
T ss_pred HHHHHHHHcCCCCcHHHHHHHHHHHHHhhhhhhHhhcccccccccCccccCCccccCCCCCcccCCCCEEEEEeccc
Confidence 99999999999999999999863 234542 23333333 24556789999999999 99877
No 22
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A
Probab=99.91 E-value=4.4e-25 Score=213.08 Aligned_cols=109 Identities=32% Similarity=0.460 Sum_probs=90.4
Q ss_pred CccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCC------
Q psy9914 178 GTTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDF------ 251 (383)
Q Consensus 178 G~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F------ 251 (383)
+.++|++||+|++|+|+.++||++|+||||++|+++++++++|+++++||+++++++|||++++||++++++.+
T Consensus 118 ~~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~~~~di~~~~~~~~~~~G~~ 197 (285)
T 3pka_A 118 DSTVITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLVDRTREATMRAINTVKPGRALSVIGRVIESYANRFGYN 197 (285)
T ss_dssp CSCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCCTTSBTTHHHHHHHHHHHTTTCE
T ss_pred CCcccCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHcCCc
Confidence 35899999999999999999999999999999999999999999999999999999999999999999864322
Q ss_pred --c----CC-CCceecccCCC----cCCCceeecCeEEe-CCCCCCC
Q psy9914 252 --D----NS-HALIWKHDNLK----LKNNGSIYLHVYFT-KPVSQFG 286 (383)
Q Consensus 252 --~----~~-~~~~~h~~gl~----~~n~~~L~~GmV~T-EPgiy~G 286 (383)
. |+ +..+|+.|.+. .+++.+|++||||| |||+|++
T Consensus 198 ~~~~~~GHgiG~~~hE~P~i~~~~~~~~~~~L~~Gmv~tiEPgiy~~ 244 (285)
T 3pka_A 198 VVRDFTGHGIGTTFHNGLVVLHYDQPAVETIMQPGMTFTIEPMINLG 244 (285)
T ss_dssp ECCSSCEEBCSSSSSCSCEECSSCCTTCCCBCCTTBEEEECCEEESS
T ss_pred cCCCcccccCCCcccCCCcccCccCCCCCCccCCCCEEEEcCEEEcC
Confidence 1 22 22222233222 34577899999999 9988865
No 23
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*
Probab=99.91 E-value=1.1e-24 Score=205.54 Aligned_cols=136 Identities=24% Similarity=0.323 Sum_probs=103.2
Q ss_pred CccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCCh-HHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCC-----
Q psy9914 178 GTTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDA-SGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDF----- 251 (383)
Q Consensus 178 G~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~-e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F----- 251 (383)
+.++|++||+|++|+|+.|+||++|+||||++|++++ +++++|+++++||+++++++|||++++||++++++.+
T Consensus 80 ~~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~vG~~~~~~~~~~~~~~~~a~~~~i~~~kpG~~~~~i~~~~~~~~~~~g~ 159 (252)
T 1qxy_A 80 SKRVIREGDLVNIDVSALKNGYYADTGISFVVGESDDPMKQKVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTARQNDL 159 (252)
T ss_dssp CSCBCCTTCEEEEEEEEEETTEEEEEEEEEECSCCSCTHHHHHHHHHHHHHHHHHTTCCTTCBTHHHHHHHHHHHHHTTC
T ss_pred CCcCcCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999999999999999999 9999999999999999999999999999999864211
Q ss_pred ---c----CC-CCceeccc-CC----CcCCCceeecCeEEe-CCCCCCCCC-CCCCCCCc---------------eEEEE
Q psy9914 252 ---D----NS-HALIWKHD-NL----KLKNNGSIYLHVYFT-KPVSQFGDT-PQSLKTKL---------------TATTT 301 (383)
Q Consensus 252 ---~----~~-~~~~~h~~-gl----~~~n~~~L~~GmV~T-EPgiy~G~~-p~~~~~~~---------------~~~~~ 301 (383)
. |+ +..+|+.| .+ ..+++.+|++||||| |||+|.|.. .+...++| +..++
T Consensus 160 ~~~~~~~GHgiG~~~he~p~~i~~~~~~~~~~~l~~Gmv~tiEPgi~~g~~~~~~~~~~~~~~~~~g~~g~riEdtvlVt 239 (252)
T 1qxy_A 160 KVIKNLTGHGVGLSLHEAPAHVLNYFDPKDKTLLTEGMVLAIEPFISSNASFVTEGKNEWAFETSDKSFVAQIEHTVIVT 239 (252)
T ss_dssp EECTTCCEEECSSSSSEEEEEECSSCCTTCCCBCCTTBEEEECCEEESSCSSCEECSSSSCEECTTCCCEEEEEEEEECC
T ss_pred EecCCccccccCcccccCCccccCCCCCCCCCCccCCCEEEEecEEEcCCCceEecCCCceEEecCCCcEEEEEEEEEEC
Confidence 1 32 22333333 22 123578999999999 999988755 22223333 11233
Q ss_pred eeccccccchhhh
Q psy9914 302 IHGVKQLNKFKRL 314 (383)
Q Consensus 302 ~~~~k~Ln~y~k~ 314 (383)
.+| +.||+++++
T Consensus 240 ~~G-e~Lt~~p~~ 251 (252)
T 1qxy_A 240 KDG-PILTTKIEE 251 (252)
T ss_dssp TTC-CEETTCC--
T ss_pred CCc-eEccCCCCC
Confidence 367 888877654
No 24
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...
Probab=99.91 E-value=1.6e-24 Score=206.14 Aligned_cols=137 Identities=29% Similarity=0.385 Sum_probs=104.8
Q ss_pred Cc-cCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCC-----
Q psy9914 178 GT-TSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDF----- 251 (383)
Q Consensus 178 G~-~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F----- 251 (383)
+. ++|++||+|++|+|+.++||++|+||||++|+++++++++|+++++||+++++++|||++++||++++++.+
T Consensus 82 ~~~~~l~~gd~v~iD~G~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~~~~~v~~~~~~~~~~~G~ 161 (263)
T 2gg2_A 82 DDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGF 161 (263)
T ss_dssp CTTCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHHCSTTCBHHHHHHHHHHHHHHTTC
T ss_pred CCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCC
Confidence 35 889999999999999999999999999999999999999999999999999999999999999999865322
Q ss_pred ---c----CC-CCceecccCCC----cCCCceeecCeEEe-CCCCCCCCC-CCCCCCCc---------------eEEEEe
Q psy9914 252 ---D----NS-HALIWKHDNLK----LKNNGSIYLHVYFT-KPVSQFGDT-PQSLKTKL---------------TATTTI 302 (383)
Q Consensus 252 ---~----~~-~~~~~h~~gl~----~~n~~~L~~GmV~T-EPgiy~G~~-p~~~~~~~---------------~~~~~~ 302 (383)
. |+ +..+|+.|.+. .+++.+|++||||| |||+|+|.. ....+++| +..++.
T Consensus 162 ~~~~~~~GHgiG~~~he~p~i~~~~~~~~~~~l~~Gmv~tiEPgi~~~~~~~~~~~~~~~~~~~~g~~g~riEdtvlVt~ 241 (263)
T 2gg2_A 162 SVVREYCGHGIGRGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVTD 241 (263)
T ss_dssp EECSSCCEEECSSSSSEEEEECSSCCTTCCCBCCTTCEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECBEEEEEET
T ss_pred EECCCcccccCCcceecCCcccCccCCCCCCCcCCCCEEEEecEEEcCCCceEEcCCCceEEecCCCeEEEEEEEEEECC
Confidence 1 22 12222222221 23578999999999 998886532 11111223 234455
Q ss_pred eccccccchhhh
Q psy9914 303 HGVKQLNKFKRL 314 (383)
Q Consensus 303 ~~~k~Ln~y~k~ 314 (383)
+|++.||+++++
T Consensus 242 ~G~e~LT~~p~~ 253 (263)
T 2gg2_A 242 NGCEILTLRKDD 253 (263)
T ss_dssp TEEEESSCCTTC
T ss_pred CccEEeCCCCcc
Confidence 799999988765
No 25
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=99.90 E-value=1.4e-23 Score=206.87 Aligned_cols=145 Identities=31% Similarity=0.411 Sum_probs=106.5
Q ss_pred cccchhhhhhhh-----hhcccCcchhhh-cccccccccc-----------CccCCcCCCeEEEEEeeeecCEEeceeee
Q psy9914 144 PLLAGYAVYSLL-----YLEHKGWYSWVL-NMLYGFLLTF-----------GTTSLEDGDIVNVDVTVYLNGYHGDCSAT 206 (383)
Q Consensus 144 pl~~g~~~~sL~-----~~~~~GwySw~~-~~sf~~I~a~-----------G~~~L~~Gd~V~iDlg~~~~GY~sD~tRT 206 (383)
.+..|+++.++. .....|.++... ..+|.+++++ ..++|++||+|++|+|+.++||++|+|||
T Consensus 101 ~i~pGvte~el~~~~~~~~~~~G~~~~~~~y~~fp~iv~sg~n~~~~H~~p~~~~L~~GDiv~iD~G~~~~GY~sD~tRT 180 (329)
T 2b3h_A 101 MIKPGVTTEEIDHAVHLACIARNCYPSPLNYYNFPKSCCTSVNEVICHGIPDRRPLQEGDIVNVDITLYRNGYHGDLNET 180 (329)
T ss_dssp TCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEETTEEECCCCCSCBCCTTCEEEEEEEEEETTEEEEEEEE
T ss_pred HhhCCCcHHHHHHHHHHHHHHcCCccccccccCCCCeEEecCCCCcCCCCCCCcCCCCCCEEEEEeeEEECCEEEeeEEE
Confidence 345677777653 122345443221 1344444443 35899999999999999999999999999
Q ss_pred EeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc------------CC-CCceecccCCCc--CC--C
Q psy9914 207 FCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD------------NS-HALIWKHDNLKL--KN--N 269 (383)
Q Consensus 207 ~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~------------~~-~~~~~h~~gl~~--~n--~ 269 (383)
|++|+++++++++|+++++||+++++++|||++++||++++++.+. |+ +..+|+.|.+.. .+ +
T Consensus 181 ~~vG~~~~~~~~l~~~v~~a~~~ai~~~kPG~~~~dI~~~~~~~~~~~G~~~~~~~~GHGIG~~~HE~P~i~~~~~~~~~ 260 (329)
T 2b3h_A 181 FFVGEVDDGARKLVQTTYECLMQAIDAVKPGVRYRELGNIIQKHAQANGFSVVRSYCGHGIHKLFHTAPNVPHYAKNKAV 260 (329)
T ss_dssp EECSSCCHHHHHHHHHHHHHHHHHHHTCCTTCBTTHHHHHHHHHHHHTTCEECCSCCEEECSSSSSEEEEECCSSSCCCC
T ss_pred EEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCccCCcccCCcCcccccCCcccccccCCCC
Confidence 9999999999999999999999999999999999999999653221 22 223333333321 12 4
Q ss_pred ceeecCeEEe-CCCCCCCCC
Q psy9914 270 GSIYLHVYFT-KPVSQFGDT 288 (383)
Q Consensus 270 ~~L~~GmV~T-EPgiy~G~~ 288 (383)
.+|++||||| |||+|+|.+
T Consensus 261 ~~L~~GMVftIEPgiy~~~~ 280 (329)
T 2b3h_A 261 GVMKSGHVFTIEPMICEGGW 280 (329)
T ss_dssp CBCCTTCEEEECCEEESSCC
T ss_pred CEECCCCEEEEeCCcCcCcc
Confidence 7999999999 999987643
No 26
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum}
Probab=99.89 E-value=3e-23 Score=207.12 Aligned_cols=169 Identities=24% Similarity=0.319 Sum_probs=117.9
Q ss_pred cccchhhhhhhh-----hhcccCcch-hhhcccccccccc-----------CccCCcCCCeEEEEEeeeecCEEeceeee
Q psy9914 144 PLLAGYAVYSLL-----YLEHKGWYS-WVLNMLYGFLLTF-----------GTTSLEDGDIVNVDVTVYLNGYHGDCSAT 206 (383)
Q Consensus 144 pl~~g~~~~sL~-----~~~~~GwyS-w~~~~sf~~I~a~-----------G~~~L~~Gd~V~iDlg~~~~GY~sD~tRT 206 (383)
.+..|+++.++. .....|-++ +....+|.+++++ +.++|++||+|++|+|+.++||++|+|||
T Consensus 129 ~ikpGvTE~El~~~~~~~~~~~Ga~ps~l~y~~Fp~iv~sg~N~~i~H~~p~~r~L~~GDiV~iD~G~~~~GY~sDitRT 208 (368)
T 3s6b_A 129 LVSPGVTTDEIDRKVHEFIIKNNAYPSTLNYYKFPKSCCTSVNEIVCHGIPDYRPLKSGDIINIDISVFYKGVHSDLNET 208 (368)
T ss_dssp TCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSEEEEETTEEECCCCCSCBCCTTCEEEEEEEEEETTEEEEEEEE
T ss_pred HccCCCCHHHHHHHHHHHHHHcCCccccccccCCCCeEEEcCccccccCCCCCccccCCCEEEEEEeEEECcEEEEEEEE
Confidence 455678877653 122334332 1112344444443 35899999999999999999999999999
Q ss_pred EeeC---CCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc------------CC-CCceecccCCCc----
Q psy9914 207 FCVG---EVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD------------NS-HALIWKHDNLKL---- 266 (383)
Q Consensus 207 ~~vG---~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~------------~~-~~~~~h~~gl~~---- 266 (383)
|++| +++++++++|+++++||+++++++|||++++||++++++.+. |+ +..+|+.|.+..
T Consensus 209 ~~vGg~~~~s~e~~~ly~~v~ea~~aai~~ikPG~~~~dI~~aa~~~i~~~G~~~~~~~~GHGIG~~vHE~P~i~~~~~~ 288 (368)
T 3s6b_A 209 YFVGDINDVPKEGKELVETCYFSLMEAIKKCKPGMFYKNIGTLIDAYVSKKNFSVVRSYSGHGVGKLFHSNPTVPHFKKN 288 (368)
T ss_dssp EECSCGGGSCHHHHHHHHHHHHHHHHHHHHCCTTCBTHHHHHHHHHHHHTTTCEECCSCCEEECSSSSSEEEEECSSSSC
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCcccceeeCCCCccccCCCccccccCC
Confidence 9999 899999999999999999999999999999999999653221 22 222333333321
Q ss_pred CCCceeecCeEEe-CCCCCCCCC-CCCCCCCc---------------eEEEEeeccccccchh
Q psy9914 267 KNNGSIYLHVYFT-KPVSQFGDT-PQSLKTKL---------------TATTTIHGVKQLNKFK 312 (383)
Q Consensus 267 ~n~~~L~~GmV~T-EPgiy~G~~-p~~~~~~~---------------~~~~~~~~~k~Ln~y~ 312 (383)
....+|++||||| |||+|+|.. ....+++| +..+|.+|++.||+..
T Consensus 289 ~~~~~L~~GMVfTIEPgiy~~~~~~~~~~d~wt~~t~dG~~gvriEdtVlVTe~G~EvLT~~~ 351 (368)
T 3s6b_A 289 KAVGIMKPGHVFTIEPMINQGHYSDVLWPDQWTSATSDGKLSAQFEHTLLITNNGVEILTKRT 351 (368)
T ss_dssp CCCCBCCTTCEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECBEEEEEETTEEEETTCCC
T ss_pred CCCCEECCCCEEEEcCeEEcCcccccccCCCceeEeeCCccEEEEeEEEEEcCCcCeECCCCC
Confidence 2357999999999 999887643 00111222 2244557889888654
No 27
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens}
Probab=99.89 E-value=4e-23 Score=219.09 Aligned_cols=174 Identities=13% Similarity=0.029 Sum_probs=124.8
Q ss_pred hhccCCCC-ceeechhHHHHHH--HHHHHHHH--HHhcc-----------ccccc-cchhhhhhhh----h-h-cccCcc
Q psy9914 107 ALGFIPIP-DFKDKGSYVESST--KQYDELAF--KYLSW-----------ALFPL-LAGYAVYSLL----Y-L-EHKGWY 163 (383)
Q Consensus 107 L~~~lP~~-~f~D~s~lIe~lR--ke~DEia~--kal~~-----------~~~pl-~~g~~~~sL~----~-~-~~~Gwy 163 (383)
+.+.+|.. ++++.++.+..+| |..+||+. +|... ....+ ..|.++.++. . . ...|
T Consensus 298 l~~~l~~~~~~v~~~~~i~~~R~iK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~g~tE~el~~~l~~~~~~~~g-- 375 (623)
T 3ctz_A 298 VSETIPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNWLEKEVPKGGVTEISAADKAEEFRRQQAD-- 375 (623)
T ss_dssp HHHHSCGGGEEEESSCHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCBHHHHHHHHHHHHHTSTT--
T ss_pred HHHhccccceEEecccHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHhcCC--
Confidence 33445543 6888888888888 77777766 22111 00111 3456666643 1 1 1233
Q ss_pred hhhhccccccccccC--------------ccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHH
Q psy9914 164 SWVLNMLYGFLLTFG--------------TTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHA 229 (383)
Q Consensus 164 Sw~~~~sf~~I~a~G--------------~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ 229 (383)
..+.+|.+|+++| .++|++||+|++|+|+.|+||++|+||||++|+|+++++++|++|++|+.+
T Consensus 376 --~~~~sf~~iv~~G~n~a~~H~~~~~~~~~~l~~gd~vliD~G~~y~gy~sDiTRT~~vG~~s~~~~~~y~~vl~a~~~ 453 (623)
T 3ctz_A 376 --FVDLSFPTISSTGPTGAIIHYAPVPETNRTLSLDEVYLIDSGAQYKDGTTDVTRTMHFETPTAYEKECFTYVLKGHIA 453 (623)
T ss_dssp --EEEESSCCEEEEGGGGGCTTCCCCGGGCCBCCTTSCEEEEECEEETTEECCEEEEECSSCCCHHHHHHHHHHHHHHHH
T ss_pred --CcCCCCCceeeecCccccccCCCCCCCCcccCCCCEEEEEEeEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHH
Confidence 2345666666555 378999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCC-CCChhhHhhccCC-------CCcCC-----C--CceecccC-CCcC--CCceeecCeEEe-CCCCC
Q psy9914 230 AISVVKP-GEYFSTIESDRNP-------DFDNS-----H--ALIWKHDN-LKLK--NNGSIYLHVYFT-KPVSQ 284 (383)
Q Consensus 230 ai~~~kP-G~~~~di~~~~~~-------~F~~~-----~--~~~~h~~g-l~~~--n~~~L~~GmV~T-EPgiy 284 (383)
++++++| |+++.+|+.++++ +|.|+ | ..+|+.|. +... ++.+|++||||| |||+|
T Consensus 454 ~~~~~~p~G~~~~~id~~ar~~l~~~G~~~~h~~GHgvG~~l~vHE~P~~i~~~~~~~~~L~~GMv~tiEPGiy 527 (623)
T 3ctz_A 454 VSAAVFPTGTKGHLLDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY 527 (623)
T ss_dssp HHTCCEETTCBGGGGGGGGTHHHHHTTCCCSSCSEEBCCSSSCSSCCSCEECTTCSCSCBCCTTCEEEECCEEE
T ss_pred HHHHhCcCCCcHHHHHHHHHHHHHHhCCCCCCCccccCCCCCCCCCCCccCCCCCCCCCccCCCeEEEEeCcEE
Confidence 9999999 9999999999763 33443 2 22333333 3332 567899999999 99666
No 28
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A
Probab=99.84 E-value=6e-21 Score=192.65 Aligned_cols=119 Identities=18% Similarity=0.345 Sum_probs=94.8
Q ss_pred cCCcCCCeEEEEEeeeecCEEeceeeeEeeC-----CCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCC----
Q psy9914 180 TSLEDGDIVNVDVTVYLNGYHGDCSATFCVG-----EVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPD---- 250 (383)
Q Consensus 180 ~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG-----~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~---- 250 (383)
++|++||+|++|+|+.++||++|+||||++| +++++++++|+++++|++++++++|||++++||++++++.
T Consensus 105 ~~L~~GDiV~ID~G~~~~GY~sD~tRT~~vG~~~eg~~s~~~~~l~~~~~~a~~~~i~~~kPG~~~~dI~~ai~~~~~~~ 184 (401)
T 2q8k_A 105 YILKEGDLVKIDLGVHVDGFIANVAHTFVVDVAQGTQVTGRKADVIKAAHLCAEAALRLVKPGNQNTQVTEAWNKVAHSF 184 (401)
T ss_dssp CBCCTTCEEEEEEEEEETTEEEEEEEEEETTCC-CCCBCHHHHHHHHHHHHHHHHHHHHCSTTCBHHHHHHHHHHHHHTT
T ss_pred cccCCCCEEEEEEEEEECCEEEEEEEEEEECCccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHc
Confidence 7899999999999999999999999999999 8999999999999999999999999999999999986421
Q ss_pred -------C-cCC-CCceecccC-CCc---------CCCceeecCeEEe-CCCCCCCCC-CCCCCCCceE
Q psy9914 251 -------F-DNS-HALIWKHDN-LKL---------KNNGSIYLHVYFT-KPVSQFGDT-PQSLKTKLTA 298 (383)
Q Consensus 251 -------F-~~~-~~~~~h~~g-l~~---------~n~~~L~~GmV~T-EPgiy~G~~-p~~~~~~~~~ 298 (383)
| -|+ +..+|+.|. +.. +++..|++||||| |||++.|.. ....+++|+.
T Consensus 185 G~~~v~~~~GHGIG~~~HE~P~~i~~~~~~~~~~~~~~~~L~~GmV~tIEP~i~~G~g~v~~~~~~~t~ 253 (401)
T 2q8k_A 185 NCTPIEGMLSHQLKQHVIDGEKTIIQNPTDQQKKDHEKAEFEVHEVYAVDVLVSSGEGKAKDAGQRTTI 253 (401)
T ss_dssp TCEECTTCEEEEEBTTBSSCSCEEESSCCHHHHHHSCCCBCCTTCEEEEEEEEESSCCCCEECSCCCCE
T ss_pred CCeecCCcccccCCCccccCCcccccCCCcccccCCCCCEeCCCCEEEEeCceEecCCEEEECCCCceE
Confidence 1 133 333444442 111 2467999999999 999987755 3333444444
No 29
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=99.80 E-value=3.3e-20 Score=180.01 Aligned_cols=105 Identities=26% Similarity=0.354 Sum_probs=85.2
Q ss_pred ccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCC--------
Q psy9914 179 TTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPD-------- 250 (383)
Q Consensus 179 ~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~-------- 250 (383)
.++|++||+|++|+|+.++||++|+||||++|+ +++++|+++++|++++++++|||++++||++++++.
T Consensus 70 ~~~L~~GDiv~iD~G~~~~GY~sD~tRT~~vG~---~~~~l~~~~~~a~~~~i~~~kpG~~~~dI~~a~~~~~~~~G~~~ 146 (295)
T 1xgs_A 70 TTVLKEGDYLKIDVGVHIDGFIADTAVTVRVGM---EEDELMEAAKEALNAAISVARAGVEIKELGKAIENEIRKRGFKP 146 (295)
T ss_dssp CCBCCTTCEEEEEEEEEETTEEEEEEEEEETTS---CCCHHHHHHHHHHHHHHHHCSTTCBTHHHHHHHHHHHHTTTCEE
T ss_pred CccccCCCEEEEEEeEEECCEEEEEEEEEEeCH---HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHCCCeE
Confidence 588999999999999999999999999999998 788999999999999999999999999999986421
Q ss_pred Cc----CCC-C-ceecccCC---CcCC-CceeecCeEEe-CCCCCCC
Q psy9914 251 FD----NSH-A-LIWKHDNL---KLKN-NGSIYLHVYFT-KPVSQFG 286 (383)
Q Consensus 251 F~----~~~-~-~~~h~~gl---~~~n-~~~L~~GmV~T-EPgiy~G 286 (383)
|. |+. . .+|+.|.+ ...+ +..|++||||| |||+|.|
T Consensus 147 ~~~~~GHgIG~l~~He~p~ip~~~~~~~~~~L~~GmV~tIEP~i~~G 193 (295)
T 1xgs_A 147 IVNLSGHKIERYKLHAGISIPNIYRPHDNYVLKEGDVFAIEPFATIG 193 (295)
T ss_dssp CTTCCEEECBTTBSSCSCEECSSCCTTCCCBCCTTCEEEECCEEESS
T ss_pred ECCCcCCCCCCcccCCCCcCCccCCCCCCCEeCCCCEEEEcceeECC
Confidence 22 222 1 23333332 2233 78999999999 9966543
No 30
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=99.73 E-value=3.6e-18 Score=170.12 Aligned_cols=103 Identities=15% Similarity=0.162 Sum_probs=84.3
Q ss_pred ccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCC--------
Q psy9914 179 TTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPD-------- 250 (383)
Q Consensus 179 ~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~-------- 250 (383)
.+.|++||+|++|+|+.++||+||+||||++| ++++++|+++++|++++++++|||++++||++++++.
T Consensus 120 ~~~L~~GDlV~ID~G~~~~GY~sD~tRT~~v~---~~~~~l~~av~eA~~aai~~~kPGv~~~dI~~ai~~vi~~~G~~~ 196 (360)
T 2nw5_A 120 DIVLKEDDVLKIDFGTHSDGRIMDSAFTVAFK---ENLEPLLVAAREGTETGIKSLGVDVRVCDIGRDINEVISSYEVEI 196 (360)
T ss_dssp CCBCCTTCEEEEEEEEEETTEEEEEEEEEECC---GGGHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHTTCEEEC
T ss_pred CcCcCCCCEEEEEEEEEECCEEEEEEEEEEcC---HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcc
Confidence 58899999999999999999999999999994 7899999999999999999999999999999986321
Q ss_pred ---------Cc----CC-CC-ceecccCC---CcCCCceeecCeEEe-CCCCC
Q psy9914 251 ---------FD----NS-HA-LIWKHDNL---KLKNNGSIYLHVYFT-KPVSQ 284 (383)
Q Consensus 251 ---------F~----~~-~~-~~~h~~gl---~~~n~~~L~~GmV~T-EPgiy 284 (383)
+. |+ +. .+|+.|.+ ..+++.+|++||||| ||++|
T Consensus 197 ~g~~~~~~~v~~~~GHgIG~y~iHe~P~I~~~~~~~~~~Le~GmV~aIEP~i~ 249 (360)
T 2nw5_A 197 GGRMWPIRPISDLHGHSISQFRIHGGISIPAVNNRDTTRIKGDSFYAVETFAT 249 (360)
T ss_dssp SSSEEECEECTTCCEEEEBTTBSCCSCEECSSCCCCCCBCCSSEEEEEEEEEE
T ss_pred ccccccccccCCeeEeeecCceeccCCEeccccCCCCcEEeCCcEEEEeceEE
Confidence 11 22 22 23334433 234678999999999 99655
No 31
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=99.68 E-value=1.2e-16 Score=159.02 Aligned_cols=108 Identities=15% Similarity=0.155 Sum_probs=83.6
Q ss_pred CccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCC--------
Q psy9914 178 GTTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNP-------- 249 (383)
Q Consensus 178 G~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~-------- 249 (383)
+.+.|++||+|++|+|+.++||+||+||||++|+. ..++++++++|+++++++++||+++.||+.++.+
T Consensus 117 ~~~~L~~GDiV~ID~G~~~dGY~sD~arT~~vg~~---~~~l~~~~~~al~aai~~~~pG~~~~dig~ai~~v~~~~~~~ 193 (358)
T 3fm3_A 117 QDIVLKEDDVLKIDFGTHSDGRIMDSAFTVAFKEN---LEPLLVAAREGTETGIKSLGVDVRVCDIGRDINEVISSYEVE 193 (358)
T ss_dssp CCCBCCTTCEEEEEEEEEETTEEEEEEEEEECCGG---GHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHTTCEEE
T ss_pred CCeEecCCCEEEEEeeEEECCEEEEEEEecccccc---chhHHHHHHHHHHHHHHhhhcCCccccccHHHHHHHhhccce
Confidence 35889999999999999999999999999999864 3467889999999999999999999999987421
Q ss_pred -------------CCcCC-CCceecc----cCCCcCCCceeecCeEEe-CCCCCCCCC
Q psy9914 250 -------------DFDNS-HALIWKH----DNLKLKNNGSIYLHVYFT-KPVSQFGDT 288 (383)
Q Consensus 250 -------------~F~~~-~~~~~h~----~gl~~~n~~~L~~GmV~T-EPgiy~G~~ 288 (383)
++.|+ +....|. |....+.+..|++||||| ||++..|..
T Consensus 194 v~~~~~~~~~v~~~~GHgiG~~~~he~~~ip~~~~~~~~~le~GmV~tIEP~is~G~g 251 (358)
T 3fm3_A 194 IGGRMWPIRPISDLHGHSISQFRIHGGISIPAVNNRDTTRIKGDSFYAVETFATTGKG 251 (358)
T ss_dssp CSSSEEECEECTTCCEEEEBTTBSCCSCEECSSCCCCCCBCCSSEEEEEEEEEESSCS
T ss_pred eccccccccccccccccccCCccccCCCccCccCCCCCcEEeeeeeEEeeeeeecCCc
Confidence 12233 1112222 222345678999999999 998765543
No 32
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A*
Probab=99.67 E-value=2.9e-17 Score=168.72 Aligned_cols=106 Identities=16% Similarity=0.145 Sum_probs=86.2
Q ss_pred ccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCC--------
Q psy9914 179 TTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPD-------- 250 (383)
Q Consensus 179 ~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~-------- 250 (383)
.++|++||+|++|+|+.++||++|+||||++| ++++++|+++++|++++++++|||++++||++++++.
T Consensus 239 ~r~Lk~GDiV~ID~G~~~dGY~sD~tRT~~Vg---~e~~~L~eav~eA~~aaI~~~kPG~~~~dI~~ai~~~i~~~G~~l 315 (478)
T 1b6a_A 239 TTVLQYDDICKIDFGTHISGRIIDCAFTVTFN---PKYDTLLKAVKDATNTGIKCAGIDVRLCDVGEAIQEVMESYEVEI 315 (478)
T ss_dssp CCBCCTTCCEEEEEEEEETTEEEEEEEEECSS---GGGHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHTCEEEE
T ss_pred CccccCCCeEEEEEEEEECCEEEEEEEEEEeC---HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCc
Confidence 37899999999999999999999999999996 7999999999999999999999999999999986421
Q ss_pred ---------Cc----CCC-C-ceecc---cCCCcCCCceeecCeEEe-CCCCCCCC
Q psy9914 251 ---------FD----NSH-A-LIWKH---DNLKLKNNGSIYLHVYFT-KPVSQFGD 287 (383)
Q Consensus 251 ---------F~----~~~-~-~~~h~---~gl~~~n~~~L~~GmV~T-EPgiy~G~ 287 (383)
+. |+. . .+|.. |.+..+++..|++||||| |||+|.|.
T Consensus 316 ~g~~~~~~~v~h~~GHGIGGl~iHE~P~vP~~~~~~~~~Le~GMVftIEP~i~~G~ 371 (478)
T 1b6a_A 316 DGKTYQVKPIRNLNGHSIGQYRIHAGKTVPIVKGGEATRMEEGEVYAIETFGSTGK 371 (478)
T ss_dssp TTEEEECEECTTCEEEEEBTTBSCCSCEEESSSSCCCCBCCTTCEEEEEEEEESSC
T ss_pred ccccccceeecCcceeCCCCccccCCCccceecCCCCCEeCCCCEEEEeCeeECCC
Confidence 22 221 2 23331 233345678999999999 99777553
No 33
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae}
Probab=98.29 E-value=2.5e-06 Score=89.27 Aligned_cols=68 Identities=24% Similarity=0.328 Sum_probs=58.8
Q ss_pred ccCCcCCCeEEEEEeeeecCEEeceeeeEeeCCC-------------ChHHHHHHHHHHHHHHHHHHhc-----------
Q psy9914 179 TTSLEDGDIVNVDVTVYLNGYHGDCSATFCVGEV-------------DASGKFLVNVAQQALHAAISVV----------- 234 (383)
Q Consensus 179 ~~~L~~Gd~V~iDlg~~~~GY~sD~tRT~~vG~~-------------s~e~~~iy~~v~ea~~~ai~~~----------- 234 (383)
...|++||+|.+|+|+..|||.+|.+.|+++|.. +....++..+++.|.++++..+
T Consensus 151 ~~vLk~GDVVKIDLGvHIDGyiadvA~Tvvvg~~~~~~~~~~~~~pvtGrkADli~AA~~A~EaalrLl~~~~~~e~l~a 230 (614)
T 4b6a_t 151 TGTLRPGDLVKITLGVHIDGYTSEVSHTMVIYPVDETKPILQPTGPLLGGKADAVAAAHIAMETVVALLACALTPEKLPA 230 (614)
T ss_dssp CCBCCTTCEEEEEEEEEETTEEEEEEEEEECCCCTTTSTTTTTTSCBCHHHHHHHHHHHHHHHHHHHHC-----------
T ss_pred cccccCCCEEEEEeeEEECCeEEEEEEEEEECCcccccccccccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhh
Confidence 3579999999999999999999999999999852 3456788888999999888877
Q ss_pred -----CCCCChhhHhhc
Q psy9914 235 -----KPGEYFSTIESD 246 (383)
Q Consensus 235 -----kPG~~~~di~~~ 246 (383)
+||++..+|..+
T Consensus 231 ~l~~~~~gvt~~~It~~ 247 (614)
T 4b6a_t 231 SLGGTSSGITGQLIRTI 247 (614)
T ss_dssp -----STTCBHHHHHHH
T ss_pred hhhccCCCcchHHHHHH
Confidence 899998887766
No 34
>3i7m_A XAA-Pro dipeptidase; structural genomics, APC64794.2, metall peptidase, creatinase/prolidase N-terminal domain, PSI-2; HET: MSE; 1.46A {Lactobacillus brevis}
Probab=87.37 E-value=0.22 Score=41.53 Aligned_cols=41 Identities=22% Similarity=0.220 Sum_probs=35.6
Q ss_pred cceeeeeeeeeeeeccchHHhhccCCCCcee-echhHHHHHHH
Q psy9914 87 GIELWKINKVLDISFAAGRKALGFIPIPDFK-DKGSYVESSTK 128 (383)
Q Consensus 87 ~ie~wkvek~~~lsv~~~~~L~~~lP~~~f~-D~s~lIe~lRk 128 (383)
.+..+|+|. +.+|+..+..|++.+|+++|+ |.+++++++|.
T Consensus 98 ~~~~ig~e~-~~~~~~~~~~L~~~l~~~~~v~~~~~~i~~lR~ 139 (140)
T 3i7m_A 98 NPEHVAIEK-GQLQVARMEALAAQFSAPSFDLDITSFIEHMRG 139 (140)
T ss_dssp CCSEEEECT-TTSCHHHHHHHHTTSSSCEEEEECHHHHHHC--
T ss_pred CCCeEEEcc-CCCCHHHHHHHHHHCCCCEEecCHHHHHHHHHc
Confidence 457799997 689999999999999999999 99999999884
No 35
>3o5v_A X-Pro dipeptidase; creatinase, N-terminal, PSI, MCSG, structural G midwest center for structural genomics; 1.85A {Streptococcus pyogenes m1 gas}
Probab=84.17 E-value=0.33 Score=40.04 Aligned_cols=38 Identities=8% Similarity=0.024 Sum_probs=33.5
Q ss_pred ceeeeeeeeeeeeccchHHhhccCCCCceeechhHHHHHH
Q psy9914 88 IELWKINKVLDISFAAGRKALGFIPIPDFKDKGSYVESST 127 (383)
Q Consensus 88 ie~wkvek~~~lsv~~~~~L~~~lP~~~f~D~s~lIe~lR 127 (383)
+..+|+|+ +.+|+..+.+|++.+| ++|+|.+++++++|
T Consensus 95 ~~~ig~e~-~~~~~~~~~~L~~~~~-~~~~~~~~~v~~lR 132 (132)
T 3o5v_A 95 AKTIYAEF-DHLNVNKFHGLQTIFS-GQFNNLTPYVQGMR 132 (132)
T ss_dssp CSEEEECT-TTCCHHHHHHHHTTCC-SEEEECHHHHHTC-
T ss_pred CCeEEEec-CCCCHHHHHHHHHhCC-CceeccHHHHHHhC
Confidence 45789997 6899999999999999 99999999998876
No 36
>3ooo_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; HET: MSE; 1.57A {Streptococcus agalactiae} PDB: 3peb_A*
Probab=82.64 E-value=0.31 Score=40.09 Aligned_cols=38 Identities=5% Similarity=0.051 Sum_probs=34.2
Q ss_pred ceeeeeeeeeeeeccchHHhhccCCCCceeechhHHHHHH
Q psy9914 88 IELWKINKVLDISFAAGRKALGFIPIPDFKDKGSYVESST 127 (383)
Q Consensus 88 ie~wkvek~~~lsv~~~~~L~~~lP~~~f~D~s~lIe~lR 127 (383)
+..+|+|+ +++|+..+.+|++.+| ++|+|.+++++++|
T Consensus 95 ~~~ig~e~-~~~~~~~~~~L~~~~~-~~~~~~~~~v~~lR 132 (132)
T 3ooo_A 95 VSKVLAEF-DNLNVTKFQGLQTVFD-GHFENLTPYIQNMR 132 (132)
T ss_dssp CSEEEECT-TTCCHHHHHHHHHHCC-SEEEECCHHHHTTC
T ss_pred CCeEEEec-CCcCHHHHHHHHHhCC-cceechHHHHHhcC
Confidence 45789997 6899999999999999 99999999999876
No 37
>3il0_A Aminopeptidase P; XAA-Pro aminopeptidase; structural genomics MCSG, protein structure initiative, midwest center for STRU genomics; HET: GOL; 2.20A {Streptococcus thermophilus}
Probab=78.48 E-value=0.82 Score=37.22 Aligned_cols=39 Identities=13% Similarity=0.133 Sum_probs=35.2
Q ss_pred ceeeeeeeeeeeeccchHHhhccCCCCceeechhHHHHHHH
Q psy9914 88 IELWKINKVLDISFAAGRKALGFIPIPDFKDKGSYVESSTK 128 (383)
Q Consensus 88 ie~wkvek~~~lsv~~~~~L~~~lP~~~f~D~s~lIe~lRk 128 (383)
+..+|+|+ . +++..+.+|++.+|++++++.++.++++|.
T Consensus 91 ~~~ig~e~-~-~~~~~~~~L~~~~~~~~~v~~~~~v~~lR~ 129 (131)
T 3il0_A 91 LETIGFDN-Q-VSFAYYQALQAIFEGYTLSPQTNFMEELRM 129 (131)
T ss_dssp CCEEEEET-T-SCHHHHHHHHHHTTTSEEEEESSHHHHHHC
T ss_pred CCEEEEcC-C-CCHHHHHHHHhhcCCCEEEECchHHHHhcc
Confidence 36899998 5 999999999999999999999999999983
No 38
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=77.97 E-value=2.4 Score=41.50 Aligned_cols=70 Identities=9% Similarity=-0.055 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc-CC----------------CCceecccCCCcCCCceeecCeE
Q psy9914 215 SGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD-NS----------------HALIWKHDNLKLKNNGSIYLHVY 277 (383)
Q Consensus 215 e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~-~~----------------~~~~~h~~gl~~~n~~~L~~GmV 277 (383)
..|++-+++.++++.+.+.+|||++..||++.+.+... ++ ...+-|...+...++.+|+.|.+
T Consensus 47 ~~R~Aa~I~~~v~~~~~~~ikpG~t~~el~~~~e~~i~~~~~~~~~~g~~FP~ciSvN~~v~Hg~P~~~~~~~~L~~GDi 126 (358)
T 3fm3_A 47 DARRAAEAHRRARYRVQSIVRPGITLLEIVRSIEDSTRTLLKGERNNGIGFPAGMSMNSCAAHYTVNPGEQDIVLKEDDV 126 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTTTSGGGGEEEEEEEEETTEEECCCCCTTCCCCBCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHhcCCCcccCCCCCcEEeeCCEEEecCCCCCCCCeEecCCCE
Confidence 47899999999999999999999999999887532111 00 11223433332335678999999
Q ss_pred Ee-CCCCC
Q psy9914 278 FT-KPVSQ 284 (383)
Q Consensus 278 ~T-EPgiy 284 (383)
+. .-|++
T Consensus 127 V~ID~G~~ 134 (358)
T 3fm3_A 127 LKIDFGTH 134 (358)
T ss_dssp EEEEEEEE
T ss_pred EEEEeeEE
Confidence 99 87543
No 39
>3ovk_A Aminopeptidase P, XAA-Pro dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.00A {Streptococcus pyogenes}
Probab=75.72 E-value=0.58 Score=38.59 Aligned_cols=38 Identities=13% Similarity=0.128 Sum_probs=34.3
Q ss_pred ceeeeeeeeeeeeccchHHhhccCCCCceeechhHHHHHH
Q psy9914 88 IELWKINKVLDISFAAGRKALGFIPIPDFKDKGSYVESST 127 (383)
Q Consensus 88 ie~wkvek~~~lsv~~~~~L~~~lP~~~f~D~s~lIe~lR 127 (383)
...+|+|+ + +|+..+.+|++.+|+++|++.+.+++++|
T Consensus 95 ~~~ig~e~-~-~~~~~~~~L~~~l~~~~~v~~~~~v~~lR 132 (132)
T 3ovk_A 95 IDCLGFED-Q-VSFSFYQAMQAELSGITLLAQSGFVEHLR 132 (132)
T ss_dssp CCEEEEET-T-SBHHHHHHHHHHCTTCEEEEESSTTGGGC
T ss_pred CCEEEEcC-C-CCHHHHHHHHhhCCCCeEEECchHHHHhC
Confidence 46799998 6 99999999999999999999999988876
No 40
>3pn9_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; 2.00A {Streptococcus pneumoniae}
Probab=74.43 E-value=1.2 Score=36.59 Aligned_cols=40 Identities=3% Similarity=-0.004 Sum_probs=35.7
Q ss_pred ceeeeeeeeeeeeccchHHhhccCCCCceeechhHHHHHHH
Q psy9914 88 IELWKINKVLDISFAAGRKALGFIPIPDFKDKGSYVESSTK 128 (383)
Q Consensus 88 ie~wkvek~~~lsv~~~~~L~~~lP~~~f~D~s~lIe~lRk 128 (383)
...+|+|. +.+++..+..|++.+|++++++.++.++++|.
T Consensus 97 ~~~vg~e~-~~~~~~~~~~l~~~~~~~~~v~~~~~i~~lR~ 136 (138)
T 3pn9_A 97 FKRVAVEF-DNLILTKYHGLKTVFETAEFDNLTPRIQRMRL 136 (138)
T ss_dssp CCEEEECT-TTCCHHHHHHHHHHSTTCEEEECHHHHHHHTT
T ss_pred CCeEEEec-CcCCHHHHHHHHHHCCCCeeeehHHHHHHHhh
Confidence 46789997 67999999999999999999999999999883
No 41
>3qoc_A Putative metallopeptidase; MCSG, PSI-2, structural genomics, midwest center for structu genomics, hydrolase; HET: MSE; 2.15A {Corynebacterium diphtheriae}
Probab=70.23 E-value=0.74 Score=38.31 Aligned_cols=40 Identities=8% Similarity=-0.096 Sum_probs=31.8
Q ss_pred cceeeeeeeeeeeeccchHHhhccCCC-CceeechhHHHHHH
Q psy9914 87 GIELWKINKVLDISFAAGRKALGFIPI-PDFKDKGSYVESST 127 (383)
Q Consensus 87 ~ie~wkvek~~~lsv~~~~~L~~~lP~-~~f~D~s~lIe~lR 127 (383)
....+|+|. +.+|+..+.+|++.+|. +++++.+.+++++|
T Consensus 95 ~~~~vG~e~-~~ls~~~~~~L~~~l~~~~~lv~~~~~v~~lR 135 (135)
T 3qoc_A 95 GPKRVGFEA-DYLSVSQCEELRKSAGSDVELIPVTGAIEKLR 135 (135)
T ss_dssp SSEEEEEET-TTSBHHHHHHHHHHSCTTEEEEEECSCC----
T ss_pred CCCeEEECC-CcccHHHHHHHHHhccCCcEEEECccHHHHhC
Confidence 356899997 68999999999999997 89999999998887
No 42
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei}
Probab=65.21 E-value=2.6 Score=40.70 Aligned_cols=70 Identities=10% Similarity=0.046 Sum_probs=46.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc-CC----CCceeccc-----------CCCcCCCceeecCeE
Q psy9914 214 ASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD-NS----HALIWKHD-----------NLKLKNNGSIYLHVY 277 (383)
Q Consensus 214 ~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~-~~----~~~~~h~~-----------gl~~~n~~~L~~GmV 277 (383)
+..|++.+++.+|++++++.+|||++-.||++.+.+.+. ++ +....-++ .+...++..|+.|.+
T Consensus 70 ~~mR~A~~i~~~a~~~~~~~ikpG~te~el~~~~~~~~~~~g~~~~~~~~~~fp~iv~~g~n~~~~H~~~~~~~l~~GD~ 149 (337)
T 4fuk_A 70 QRIKTVCQLSREVLDIATAAAKPGITTDELDRIVHEATVERNMYPSPLNYYGFPKSVCTSVNEVICHGIPDSRELEEGDI 149 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEETTEEECCCCCSCBCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCccCCCCCCcCceeeccccccccCCCCCCccccCCCE
Confidence 458889999999999999999999999999876432111 10 00000011 112347788999999
Q ss_pred Ee-CCCC
Q psy9914 278 FT-KPVS 283 (383)
Q Consensus 278 ~T-EPgi 283 (383)
+. .-|+
T Consensus 150 v~iD~g~ 156 (337)
T 4fuk_A 150 LNIDVSS 156 (337)
T ss_dssp EEEEEEE
T ss_pred EEEecce
Confidence 98 8754
No 43
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=41.61 E-value=24 Score=32.16 Aligned_cols=64 Identities=9% Similarity=-0.063 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc-CC-------------------CCceecccCCCcCCCceeec
Q psy9914 215 SGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD-NS-------------------HALIWKHDNLKLKNNGSIYL 274 (383)
Q Consensus 215 e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~-~~-------------------~~~~~h~~gl~~~n~~~L~~ 274 (383)
..|++.+++.++++++++.+|||++-.||.+.+...+. ++ .....| ...++..|++
T Consensus 12 ~mr~A~~i~~~a~~~~~~~ikpG~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~H----~~~~~~~l~~ 87 (264)
T 3tb5_A 12 MMDESGELLADVHRHLRTFIKPGITSWDIEVFVRDFIESHGGVAAQIGYEGYKYATCCSINDEICH----GFPRKKVLKD 87 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCCSEEEEETTEEEC----CCCCSCBCCT
T ss_pred HHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHHHHcCCCcccccccCCCcceEECCcccccC----CCCCCccccC
Confidence 46778888999999999999999999999876432111 11 111122 2346788999
Q ss_pred CeEEe-CCC
Q psy9914 275 HVYFT-KPV 282 (383)
Q Consensus 275 GmV~T-EPg 282 (383)
|.++. .-|
T Consensus 88 Gdlv~iD~g 96 (264)
T 3tb5_A 88 GDLIKVDMC 96 (264)
T ss_dssp TCEEEEEEE
T ss_pred CCEEEEecc
Confidence 99888 874
No 44
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis}
Probab=40.21 E-value=20 Score=35.75 Aligned_cols=69 Identities=9% Similarity=-0.112 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc-CCCCceec----------ccCCCcCCCceeecCeEEe-CCC
Q psy9914 215 SGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD-NSHALIWK----------HDNLKLKNNGSIYLHVYFT-KPV 282 (383)
Q Consensus 215 e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~-~~~~~~~h----------~~gl~~~n~~~L~~GmV~T-EPg 282 (383)
..|++.+++.+|+.++++.++||++-.||.......+. +|....+. ...+...++..|++|.++. .-|
T Consensus 179 ~mr~A~~i~~~a~~~~~~~i~pG~tE~el~~~~~~~~~~~G~~~~~f~~ivasG~n~~~~H~~~~~~~l~~GdlvliD~G 258 (427)
T 3ig4_A 179 IIKEAIAVTKDGIYNVLKHAKADMMEYELEAQFDFTLKSSGIKHHAFNTILASGKNATVLHYEDNDAQIQNGDLVLLDLG 258 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCSSEEHHHHHHHHHHHHHHTTCCEESSCCEEEEGGGGGSTTCCCCCSEECTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCCCCCEEEECccccccccCcccccCCCCCEEEEEee
Confidence 36778888999999999999999999998876432211 11100000 0111234678999999998 875
Q ss_pred C
Q psy9914 283 S 283 (383)
Q Consensus 283 i 283 (383)
+
T Consensus 259 ~ 259 (427)
T 3ig4_A 259 A 259 (427)
T ss_dssp E
T ss_pred e
Confidence 3
No 45
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=35.90 E-value=88 Score=27.72 Aligned_cols=90 Identities=14% Similarity=0.195 Sum_probs=50.0
Q ss_pred CcCCCeEEEEEeeee-cCEEeceee-----eEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCcC-C
Q psy9914 182 LEDGDIVNVDVTVYL-NGYHGDCSA-----TFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFDN-S 254 (383)
Q Consensus 182 L~~Gd~V~iDlg~~~-~GY~sD~tR-----T~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~~-~ 254 (383)
+++||.|.+++.... +|-.-|.|+ +|.+|.- .+...++.++.-+++|-+.. +.-...+.|-. .
T Consensus 3 i~~gd~V~v~Y~g~~~dG~~fdss~~~~P~~f~lG~g---------~vipG~eeaL~Gm~vGe~~~-v~Ippe~aYGe~~ 72 (196)
T 2kfw_A 3 VAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHG---------SLISGLETALEGHEVGDKFD-VAVGANDAYGQYD 72 (196)
T ss_dssp CCSSCEEEEEEEEEETTTEEEEECCTTSCCEEESSSS---------SSCHHHHHHHSSSCTTCEEE-EECSTTTTSSCCC
T ss_pred CCCCCEEEEEEEEEECCCCEEEecCCCCCEEEEECCC---------CcchHHHHHHcCCCCCCEEE-EEeCcHHhcCCCC
Confidence 678999999988876 776666653 5666631 13457778888888886532 11111112211 1
Q ss_pred CCceecccCCCcCCCceeecCeEEe-CC
Q psy9914 255 HALIWKHDNLKLKNNGSIYLHVYFT-KP 281 (383)
Q Consensus 255 ~~~~~h~~gl~~~n~~~L~~GmV~T-EP 281 (383)
..++...|--.......+++||+|. ++
T Consensus 73 ~~lV~~vp~~~f~~~~~~~~G~~~~~~~ 100 (196)
T 2kfw_A 73 ENLVQRVPKDVFMGVDELQVGMRFLAET 100 (196)
T ss_dssp TTTCEEECGGGCCCSSCCCTTCEEEEEE
T ss_pred hhhEEEEEHHHCCCccCcccCCEEEEEC
Confidence 1111111111222345789999998 54
No 46
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=34.88 E-value=35 Score=32.03 Aligned_cols=68 Identities=9% Similarity=0.023 Sum_probs=45.8
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc-CC-----------CCceecccCCCcCCCceeecCeEEe-C
Q psy9914 214 ASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD-NS-----------HALIWKHDNLKLKNNGSIYLHVYFT-K 280 (383)
Q Consensus 214 ~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~-~~-----------~~~~~h~~gl~~~n~~~L~~GmV~T-E 280 (383)
+..|++.+++.++++.+.+.++||++-.||++.+...+. ++ +..+.|.... ...+..|++|.++. .
T Consensus 4 ~~mr~A~~i~~~~l~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~fp~~vs~n~~~~H~~p~-~~~~~~L~~GDiv~iD 82 (295)
T 1xgs_A 4 EKLMKAGEIAKKVREKAIKLARPGMLLLELAESIEKMIMELGGKPAFPVNLSINEIAAHYTPY-KGDTTVLKEGDYLKID 82 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCEESSCCEEEETTEEECCCCC-TTCCCBCCTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHcCCCCCCCcEEeeCCccccccCC-CCCCccccCCCEEEEE
Confidence 357889999999999999999999999999987532221 11 1112222111 11357889998888 7
Q ss_pred CC
Q psy9914 281 PV 282 (383)
Q Consensus 281 Pg 282 (383)
-|
T Consensus 83 ~G 84 (295)
T 1xgs_A 83 VG 84 (295)
T ss_dssp EE
T ss_pred Ee
Confidence 64
No 47
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}
Probab=34.64 E-value=27 Score=33.14 Aligned_cols=65 Identities=6% Similarity=0.003 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc-CC--------------CCceecccCCCcCCCceeecCeEEe
Q psy9914 215 SGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD-NS--------------HALIWKHDNLKLKNNGSIYLHVYFT 279 (383)
Q Consensus 215 e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~-~~--------------~~~~~h~~gl~~~n~~~L~~GmV~T 279 (383)
..|++.+++.+++..+++.++||++-.|+.+.+...+. ++ .....| ...++..|++|.++.
T Consensus 141 ~~r~a~~~~~~~~~~~~~~~~~G~te~e~~~~~~~~~~~~g~~~~~f~~iv~~g~~~~~~h----~~~~~~~l~~gd~v~ 216 (359)
T 2zsg_A 141 KIKQAIEISERAFLETVQQIRAGMTEKEIAALLEYTMRKEGAEGVAFDTIVASGCRSALPH----GKASDKVVERGDVIV 216 (359)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCTTCBHHHHHHHHHHHHHHTTCSEESSCCEEEEGGGGGSTT----CCCCSCBCCTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCEEEEcccccccc----CCCCCcccCCCCEEE
Confidence 36777788889999999999999999998887431111 11 011112 223467899999888
Q ss_pred -CCCC
Q psy9914 280 -KPVS 283 (383)
Q Consensus 280 -EPgi 283 (383)
.-|.
T Consensus 217 iD~g~ 221 (359)
T 2zsg_A 217 IDFGA 221 (359)
T ss_dssp EEECE
T ss_pred EEEeE
Confidence 8753
No 48
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A
Probab=32.75 E-value=35 Score=32.59 Aligned_cols=69 Identities=12% Similarity=-0.049 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc-CCCCceec----------ccCCCcCCCceeecCeEEe-CCC
Q psy9914 215 SGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD-NSHALIWK----------HDNLKLKNNGSIYLHVYFT-KPV 282 (383)
Q Consensus 215 e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~-~~~~~~~h----------~~gl~~~n~~~L~~GmV~T-EPg 282 (383)
..|++.+++.++.+.+++.++||++-.|+.+.....+. ++...... ...+...++..|++|.++. .-|
T Consensus 135 ~~r~A~~i~~~a~~~~~~~i~~G~te~el~~~~~~~~~~~g~~~~~f~~iv~~g~n~~~~H~~~~~~~l~~gd~v~iD~G 214 (351)
T 1wy2_A 135 IIEKACEIADKAVMAAIEEITEGKKEREVAAKVEYLMKMNGAEKPAFDTIIASGYRSALPHGVASDKRIERGDLVVIDLG 214 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCSEESSCCEEEEGGGGGSTTCBCCSCBCCTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCEEEEccccccccCCCCCcccCCCCEEEEEEE
Confidence 36777888889999999999999999888887521111 11000000 0111223567899999998 875
Q ss_pred C
Q psy9914 283 S 283 (383)
Q Consensus 283 i 283 (383)
.
T Consensus 215 ~ 215 (351)
T 1wy2_A 215 A 215 (351)
T ss_dssp E
T ss_pred E
Confidence 4
No 49
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=32.63 E-value=35 Score=32.66 Aligned_cols=35 Identities=20% Similarity=0.376 Sum_probs=30.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccC
Q psy9914 214 ASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRN 248 (383)
Q Consensus 214 ~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~ 248 (383)
+..|++.+++.+|++++++.++||++-.||++.+.
T Consensus 82 ~~mR~A~~ia~~al~~~~~~i~pGvte~el~~~~~ 116 (329)
T 2b3h_A 82 EGMRLVCRLAREVLDVAAGMIKPGVTTEEIDHAVH 116 (329)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCcHHHHHHHHH
Confidence 34778888889999999999999999999988753
No 50
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=32.55 E-value=9.8 Score=30.39 Aligned_cols=35 Identities=20% Similarity=0.466 Sum_probs=26.1
Q ss_pred CchhHH-HHHHHHhHHhhcchhhhhhhhhhhhcccccccc
Q psy9914 4 DPYCFQ-ILNFYQTAAIYKPAVFFNDYWNHAAIIDIQFWN 42 (383)
Q Consensus 4 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~afknDi~fW~ 42 (383)
||-+|+ |||||.+-.+-.|.-+. ...|..+..||.
T Consensus 57 dp~~F~~IL~~lr~g~l~~p~~~~----~~~l~~Ea~fy~ 92 (107)
T 3drz_A 57 DPTYFGPVLNYLRHGKLVINKDLA----EEGVLEEAEFYN 92 (107)
T ss_dssp CHHHHHHHHHHHHHSCCCCCTTSC----HHHHHHHHHHHT
T ss_pred ChHHHHHHHHHhCCCeeCCCCCCC----HHHHHHHHHHCC
Confidence 788996 89999998766665433 456777888885
No 51
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ...
Probab=32.52 E-value=35 Score=33.76 Aligned_cols=65 Identities=12% Similarity=0.126 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc-CC--------------CCceecccCCCcCCCceeecCeEEe
Q psy9914 215 SGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD-NS--------------HALIWKHDNLKLKNNGSIYLHVYFT 279 (383)
Q Consensus 215 e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~-~~--------------~~~~~h~~gl~~~n~~~L~~GmV~T 279 (383)
..|++.+++.+|+.++++.++||++-.||.+.+...+. ++ .....|+ ..++..|++|.++.
T Consensus 183 ~~r~A~~i~~~a~~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~~~f~~iv~~G~n~~~~H~----~~~~~~l~~gd~vl 258 (440)
T 2v3z_A 183 VLRRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHHEFNRHGARYPSYNTIVGSGENGCILHY----TENECEMRDGDLVL 258 (440)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCCEESSCCEEEEGGGGGSTTC----CCCCSBCCTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCcCCCCCeEEEcCccccccC----CCCCccccCCCEEE
Confidence 37788888899999999999999998888777522111 11 1111222 24678899999888
Q ss_pred -CCCC
Q psy9914 280 -KPVS 283 (383)
Q Consensus 280 -EPgi 283 (383)
.-|+
T Consensus 259 iD~G~ 263 (440)
T 2v3z_A 259 IDAGC 263 (440)
T ss_dssp EEECE
T ss_pred EEeeE
Confidence 8753
No 52
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=30.74 E-value=43 Score=32.55 Aligned_cols=33 Identities=18% Similarity=0.194 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhhHhhcc
Q psy9914 215 SGKFLVNVAQQALHAAISVVKPGEYFSTIESDR 247 (383)
Q Consensus 215 e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~ 247 (383)
..|++-+++.++++++.+.++||++-.||.+.+
T Consensus 49 ~mR~A~~I~~~a~~~~~~~ikpG~te~El~~~i 81 (360)
T 2nw5_A 49 DARRAAEAHRRARYRVQSIVRPGITLLEIVRSI 81 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHH
Confidence 477888889999999999999999999998875
No 53
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=30.38 E-value=12 Score=29.99 Aligned_cols=37 Identities=32% Similarity=0.433 Sum_probs=27.3
Q ss_pred CchhHH-HHHHHHhHHhhcchhhhhhhhhhhhcccccccccC
Q psy9914 4 DPYCFQ-ILNFYQTAAIYKPAVFFNDYWNHAAIIDIQFWNNR 44 (383)
Q Consensus 4 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~afknDi~fW~~~ 44 (383)
||-+|+ |||||.+..+-.|.-+- ...|..+..||.=.
T Consensus 47 dp~~F~~ILnflR~g~l~~p~~~~----~~~l~~Ea~fy~i~ 84 (105)
T 1nn7_A 47 DPDIFRHILNFYRTGKLHYPRHEC----ISAYDEELAFFGLI 84 (105)
T ss_dssp CTTTHHHHHHHHHHSCBCCCTTSC----HHHHHHHHHHHTCC
T ss_pred CcHHHHHHHHHHhcCCCCCCCCcC----HHHHHHHHHHcCCC
Confidence 788885 89999998766665432 45788888888633
No 54
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum}
Probab=30.30 E-value=40 Score=32.98 Aligned_cols=35 Identities=17% Similarity=0.190 Sum_probs=30.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccC
Q psy9914 214 ASGKFLVNVAQQALHAAISVVKPGEYFSTIESDRN 248 (383)
Q Consensus 214 ~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~ 248 (383)
+..|++.+++.+|++++++.++||++-.||++.+.
T Consensus 110 e~mR~A~~ia~~al~~~~~~ikpGvTE~El~~~~~ 144 (368)
T 3s6b_A 110 QRIREACILGRKTLDYAHTLVSPGVTTDEIDRKVH 144 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHH
Confidence 34778888999999999999999999999988753
No 55
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=29.99 E-value=12 Score=30.90 Aligned_cols=36 Identities=31% Similarity=0.473 Sum_probs=27.3
Q ss_pred CchhHH-HHHHHHhHHhhcchhhhhhhhhhhhccccccccc
Q psy9914 4 DPYCFQ-ILNFYQTAAIYKPAVFFNDYWNHAAIIDIQFWNN 43 (383)
Q Consensus 4 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~afknDi~fW~~ 43 (383)
||-+|+ |||||.+..+-.|.-+ -...|..+..||.=
T Consensus 60 dp~~F~~ILnflR~G~l~~p~~~----~~~~l~~Ea~fy~i 96 (124)
T 1s1g_A 60 DPEVFRCVLNFYRTGKLHYPRYE----CISAYDDELAFYGI 96 (124)
T ss_dssp CHHHHHHHHHHHHHSCBCCCTTS----CHHHHHHHHHHTTC
T ss_pred ChHHHHHHHHHHhcCCCCCCCCc----CHHHHHHHHHHcCC
Confidence 788886 8999999876666543 24678888889863
No 56
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*
Probab=29.58 E-value=50 Score=29.65 Aligned_cols=33 Identities=12% Similarity=0.102 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhhHhhcc
Q psy9914 215 SGKFLVNVAQQALHAAISVVKPGEYFSTIESDR 247 (383)
Q Consensus 215 e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~ 247 (383)
..|++-+++.++++.+.+.++||++-.||.+..
T Consensus 11 ~~r~A~~i~~~~~~~~~~~i~~G~te~el~~~~ 43 (252)
T 1qxy_A 11 ALKEIGYICAKVRNTMQAATKPGITTKELDNIA 43 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCcHHHHHHHH
Confidence 467788888999999999999999999988764
No 57
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis}
Probab=29.46 E-value=33 Score=32.60 Aligned_cols=64 Identities=16% Similarity=0.132 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCC----------CCcC----C-CCceecccCCCcCCCceeecCeEEe
Q psy9914 215 SGKFLVNVAQQALHAAISVVKPGEYFSTIESDRNP----------DFDN----S-HALIWKHDNLKLKNNGSIYLHVYFT 279 (383)
Q Consensus 215 e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~----------~F~~----~-~~~~~h~~gl~~~n~~~L~~GmV~T 279 (383)
..|++.+++.+++..+++.++||++-.|+.+.... .|.. + .....| ...++..|++|.++.
T Consensus 138 ~~r~A~~i~~~~~~~~~~~i~~G~te~e~~~~~~~~~~~~g~~~~~f~~iv~~g~n~~~~H----~~~~~~~l~~gd~v~ 213 (356)
T 3q6d_A 138 ILKEAAQIADAAFEHILSFIRPGVSEIEVSNELEFFMRKQGATSSSFDIIVASGLRSALPH----GVASEKVIETGDFVT 213 (356)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCTTCBHHHHHHHHHHHHHHTTCSEESSCCEEEEGGGGGCTT----CBCCSCBCCTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHCCCCcCCCCCEEEEcCccccCC----CCCCCcccCCCCEEE
Confidence 36677777888899999999999999998876421 1110 0 111112 223567899999988
Q ss_pred -CCC
Q psy9914 280 -KPV 282 (383)
Q Consensus 280 -EPg 282 (383)
.-|
T Consensus 214 iD~g 217 (356)
T 3q6d_A 214 LDFG 217 (356)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 875
No 58
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=29.33 E-value=45 Score=30.33 Aligned_cols=33 Identities=15% Similarity=0.081 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhhHhhcc
Q psy9914 215 SGKFLVNVAQQALHAAISVVKPGEYFSTIESDR 247 (383)
Q Consensus 215 e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~ 247 (383)
..|++.+++.++++++++.++||++-.||.+..
T Consensus 16 ~~r~A~~i~~~~~~~~~~~i~pG~tE~el~~~~ 48 (262)
T 3mx6_A 16 KMRAAGKLAAETLDFITDHVKPNVTTNSLNDLC 48 (262)
T ss_dssp HHHHHHHHHHHHHHHHGGGCCTTCBHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHH
Confidence 478888899999999999999999999998874
No 59
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=25.96 E-value=36 Score=21.46 Aligned_cols=25 Identities=28% Similarity=0.161 Sum_probs=19.3
Q ss_pred ceeeeEeeCCCChHHHHHHHHHHHH
Q psy9914 202 DCSATFCVGEVDASGKFLVNVAQQA 226 (383)
Q Consensus 202 D~tRT~~vG~~s~e~~~iy~~v~ea 226 (383)
-.-||+.+|..+++.+++-+-+..|
T Consensus 3 gqvrtiwvggtpeelkklkeeakka 27 (36)
T 2ki0_A 3 GQVRTIWVGGTPEELKKLKEEAKKA 27 (36)
T ss_dssp CSCCCCCBCCCHHHHHHHHHHHHHH
T ss_pred ceeEEEEecCCHHHHHHHHHHHHhc
Confidence 3569999998888888887766554
No 60
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus}
Probab=25.75 E-value=62 Score=29.91 Aligned_cols=34 Identities=15% Similarity=0.025 Sum_probs=29.8
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhcc
Q psy9914 214 ASGKFLVNVAQQALHAAISVVKPGEYFSTIESDR 247 (383)
Q Consensus 214 ~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~ 247 (383)
+..|++.+++.++++++++.++||++-.||.+..
T Consensus 41 ~~~r~A~~i~~~a~~~~~~~i~~G~tE~el~~~~ 74 (286)
T 3tav_A 41 DAMAAAGSIVGAALVAVRDAAKAGVSTLELDQVA 74 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHH
Confidence 3578888889999999999999999999998874
No 61
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...
Probab=25.58 E-value=58 Score=29.48 Aligned_cols=34 Identities=21% Similarity=0.185 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhhHhhccC
Q psy9914 215 SGKFLVNVAQQALHAAISVVKPGEYFSTIESDRN 248 (383)
Q Consensus 215 e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~ 248 (383)
..|++.+++.++++.+.+.++||++-.||.+...
T Consensus 12 ~~r~A~~i~~~~~~~~~~~i~~G~te~el~~~~~ 45 (263)
T 2gg2_A 12 KMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICN 45 (263)
T ss_dssp HHHHHHHHHHHHHHHHGGGCSTTCBHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 4677888889999999999999999999887753
No 62
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=25.35 E-value=16 Score=30.92 Aligned_cols=36 Identities=31% Similarity=0.475 Sum_probs=26.8
Q ss_pred CchhHH-HHHHHHhHHhhcchhhhhhhhhhhhccccccccc
Q psy9914 4 DPYCFQ-ILNFYQTAAIYKPAVFFNDYWNHAAIIDIQFWNN 43 (383)
Q Consensus 4 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~afknDi~fW~~ 43 (383)
||-+|+ |||||.+-.+..|.-+- ...|..+..||.=
T Consensus 82 dp~~F~~ILnflR~G~l~~p~~~~----~~~l~eEa~fy~i 118 (140)
T 2nz0_B 82 DPEVFRCVLNFYRTGKLHYPRYEC----ISAYDDELAFYGI 118 (140)
T ss_dssp CHHHHHHHHHHHHHSSBCCCTTSC----HHHHHHHHHHHTC
T ss_pred CcHHHHHHHHHHhcCCcCCCCCcC----HHHHHHHHHHcCC
Confidence 788886 79999998766665442 4578888888863
No 63
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=25.11 E-value=52 Score=29.93 Aligned_cols=33 Identities=21% Similarity=0.113 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhhHhhcc
Q psy9914 215 SGKFLVNVAQQALHAAISVVKPGEYFSTIESDR 247 (383)
Q Consensus 215 e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~ 247 (383)
..|++-+++.++++.+++.++||++-.||.+..
T Consensus 24 ~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~ 56 (262)
T 1o0x_A 24 KMKKAGKAVAVALREVRKVIVPGKTAWDVETLV 56 (262)
T ss_dssp HHHHHHHHHHHHHHHGGGGCSTTCBHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCcHHHHHHHH
Confidence 467778888899999999999999999988874
No 64
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A
Probab=24.66 E-value=64 Score=29.86 Aligned_cols=34 Identities=21% Similarity=0.156 Sum_probs=29.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhcc
Q psy9914 214 ASGKFLVNVAQQALHAAISVVKPGEYFSTIESDR 247 (383)
Q Consensus 214 ~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~ 247 (383)
+..|++.+++.+|++++++.++||++-.||.+..
T Consensus 48 ~~~r~A~~i~~~a~~~~~~~i~pG~tE~el~~~~ 81 (285)
T 3pka_A 48 EKMRVAGRIAAGALAEAGKAVAPGVTTDELDRIA 81 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHH
Confidence 3477888889999999999999999999998875
No 65
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A
Probab=24.50 E-value=62 Score=31.80 Aligned_cols=34 Identities=12% Similarity=0.130 Sum_probs=28.8
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCChhhHhhcc
Q psy9914 214 ASGKFLVNVAQQALHAAISVVKPGEYFSTIESDR 247 (383)
Q Consensus 214 ~e~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~ 247 (383)
+..|++-+++.++++.+.+.++||++-.||++.+
T Consensus 26 ~~mR~A~~i~~~~l~~~~~~ikpGvte~el~~~~ 59 (401)
T 2q8k_A 26 TKYKMGGDIANRVLRSLVEASSSGVSVLSLCEKG 59 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCC-CCBHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHH
Confidence 3477888899999999999999999999998873
No 66
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus}
Probab=24.40 E-value=58 Score=31.11 Aligned_cols=67 Identities=7% Similarity=-0.099 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCChhhHhhccCCCCc-C-CCC-----ce-----ecccCCCcCCCceeecCeEEe-CCC
Q psy9914 216 GKFLVNVAQQALHAAISVVKPGEYFSTIESDRNPDFD-N-SHA-----LI-----WKHDNLKLKNNGSIYLHVYFT-KPV 282 (383)
Q Consensus 216 ~~~iy~~v~ea~~~ai~~~kPG~~~~di~~~~~~~F~-~-~~~-----~~-----~h~~gl~~~n~~~L~~GmV~T-EPg 282 (383)
.|++.+++.+|..++++.++||++-.|+.+.+...+. + +.. .+ .-...+...++..|++|.++. .-|
T Consensus 159 ~r~A~~i~~~a~~~~~~~~~~G~tE~el~~~~~~~~~~~~g~~~~~f~~iv~~G~n~~~~H~~~~~~~l~~gd~v~iD~g 238 (377)
T 4fkc_A 159 HKKAAEIVDKVFYRFIEGKLEGKSERELANRIEYMIKNEFGADDVSFEPIVASGPNGANPHHRPSHRKIRKGDVVIFDYG 238 (377)
T ss_dssp HHHHHHHHHHHHHHHTTSCCTTCBHHHHHHHHHHHHHTSTTCCEESSCCEEEEGGGGGCTTCCCCSCBCCTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHhhhhccCCCccHHHHHHHHhhhhhhccCCCCcccCcccccccccccccccccccccccccccccccc
Confidence 6778888889999999999999999998765421110 1 100 00 000111234678899999988 875
No 67
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=23.87 E-value=18 Score=28.76 Aligned_cols=35 Identities=26% Similarity=0.459 Sum_probs=25.2
Q ss_pred CchhHH-HHHHHHh-HHhhcchhhhhhhhhhhhcccccccc
Q psy9914 4 DPYCFQ-ILNFYQT-AAIYKPAVFFNDYWNHAAIIDIQFWN 42 (383)
Q Consensus 4 ~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~afknDi~fW~ 42 (383)
||-+|. |||||.+ -..-.|.-+- ...|..+..||.
T Consensus 49 dp~~F~~ILnflR~~G~l~~p~~~~----~~~~~~Ea~fy~ 85 (100)
T 1t1d_A 49 NRPSFDAILYFYQSGGRLRRPVNVP----LDVFSEEIKFYE 85 (100)
T ss_dssp CSTTHHHHHHHHHTTSCCCCCTTSC----HHHHHHHHHHTT
T ss_pred ChHHHHHHHHHHhcCCcccCCCCCC----HHHHHHHHHHcC
Confidence 677775 8999998 4555555443 467888888886
No 68
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=23.68 E-value=1e+02 Score=24.17 Aligned_cols=54 Identities=26% Similarity=0.219 Sum_probs=38.1
Q ss_pred CccCCcCCCeEEEEEeeee-cCEEeceee-------------eEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCCh
Q psy9914 178 GTTSLEDGDIVNVDVTVYL-NGYHGDCSA-------------TFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYF 240 (383)
Q Consensus 178 G~~~L~~Gd~V~iDlg~~~-~GY~sD~tR-------------T~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~ 240 (383)
|....+.||.|.++..+.. +|-.-|-|+ +|.+|.- .+..+.+.++..+++|-+.
T Consensus 16 g~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~~~~~~~~p~~f~lG~~---------~~i~G~e~~l~gm~~Ge~~ 83 (119)
T 3kz7_A 16 KTNFPKKGDVVHCWYTGTLPDGTVFDTNIQTSSKKKKNAKPLSFKVGVG---------KVIRGWDEALLTMSKGEKA 83 (119)
T ss_dssp SSCCCCTTCEEEEEEEEECTTSCEEEECCCCSSSTTTTCCCEEEETTSS---------SSCHHHHHHHTTCCTTCEE
T ss_pred CCCcCCCCCEEEEEEEEEECCCCEEEeccccccccccCCCCEEEEECCC---------ChhHHHHHHHhCCCCCCEE
Confidence 3456789999999999886 887666553 3555641 1356778888888888753
No 69
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=22.61 E-value=1e+02 Score=23.61 Aligned_cols=54 Identities=22% Similarity=0.258 Sum_probs=37.6
Q ss_pred CccCCcCCCeEEEEEeeee-cCEEecee------eeEeeCCCChHHHHHHHHHHHHHHHHHHhcCCCCCh
Q psy9914 178 GTTSLEDGDIVNVDVTVYL-NGYHGDCS------ATFCVGEVDASGKFLVNVAQQALHAAISVVKPGEYF 240 (383)
Q Consensus 178 G~~~L~~Gd~V~iDlg~~~-~GY~sD~t------RT~~vG~~s~e~~~iy~~v~ea~~~ai~~~kPG~~~ 240 (383)
|....+.||.|.++..+.. +|-.-|-+ .+|.+|.- .+....+.++..+++|-+.
T Consensus 12 g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~---------~~i~g~~~~l~gm~~Ge~~ 72 (107)
T 2ppn_A 12 GRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQ---------EVIRGWEEGVAQMSVGQRA 72 (107)
T ss_dssp SSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSC---------CSCHHHHHHHTTCCTTCEE
T ss_pred CCcCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCC---------ChHHHHHHHHhCCCCCCEE
Confidence 4445889999999998876 77655554 35666742 1355777888888888654
No 70
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=21.40 E-value=20 Score=29.12 Aligned_cols=35 Identities=23% Similarity=0.569 Sum_probs=26.3
Q ss_pred CchhHH-HHHHHHhHHhhcchhhhhhhhhhhhcccccccc
Q psy9914 4 DPYCFQ-ILNFYQTAAIYKPAVFFNDYWNHAAIIDIQFWN 42 (383)
Q Consensus 4 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~afknDi~fW~ 42 (383)
||-+|. |||||.+-.+-.|.-+. ...|.....||.
T Consensus 53 dp~~F~~ILnylR~G~l~~p~~~~----~~~~~~Ea~fy~ 88 (115)
T 3kvt_A 53 HPGVFAQIINYYRSGKLHYPTDVC----GPLFEEELEFWG 88 (115)
T ss_dssp CTTTHHHHHHHHHHSCBCCCSSSC----HHHHHHHHHHHT
T ss_pred ChHHHHHHHHHhcCCCCCCCCccc----HHHHHHHHHHhC
Confidence 788886 89999997666665443 457888888886
Done!