BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy9917
         (219 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|263173412|gb|ACY69935.1| mitochondrial F1F0-ATP synthase subunit delta/ATP16 [Cimex
           lectularius]
          Length = 161

 Score =  216 bits (550), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 103/147 (70%), Positives = 126/147 (85%), Gaps = 1/147 (0%)

Query: 1   MAARLVT-SATRLARRGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPT 59
            A RL + SA   A RGYADQMDFT A+ NKVFY+N NVKQVDVPSFSG+FGILPNHVPT
Sbjct: 10  FAFRLASRSANFQATRGYADQMDFTFAAANKVFYSNSNVKQVDVPSFSGSFGILPNHVPT 69

Query: 60  LAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSK 119
           LA+L+PGV+TV+E +G S+K+FVSSGT+T+N+DSSVQ++AEEAHP++  D SAA++ L+K
Sbjct: 70  LAVLRPGVVTVFEQDGNSKKVFVSSGTVTINEDSSVQVLAEEAHPLEDFDLSAAKEQLNK 129

Query: 120 AQSELSSASSETAKAEAQIAVEVAEAL 146
           AQ++LS ASSE  KAEA IAVEVAEAL
Sbjct: 130 AQADLSRASSELEKAEALIAVEVAEAL 156



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 49/71 (69%), Positives = 62/71 (87%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K+FVSSGT+T+N+DSSVQ++AEEAHP++  D SAA++ L+KAQ++LS ASSE  KAEA I
Sbjct: 89  KVFVSSGTVTINEDSSVQVLAEEAHPLEDFDLSAAKEQLNKAQADLSRASSELEKAEALI 148

Query: 207 AVEVAEALVAA 217
           AVEVAEALV A
Sbjct: 149 AVEVAEALVQA 159


>gi|332374602|gb|AEE62442.1| unknown [Dendroctonus ponderosae]
          Length = 158

 Score =  212 bits (540), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 94/133 (70%), Positives = 124/133 (93%)

Query: 14  RRGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYET 73
           +RGYA++M FT ASGN++FY  ++V+QVDVPSFSG+FGILP HVPTLA+LKPGV++VYE 
Sbjct: 21  KRGYAEEMSFTFASGNQIFYEAKSVRQVDVPSFSGSFGILPKHVPTLAVLKPGVVSVYEN 80

Query: 74  EGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAK 133
           EG  +KIFVSSGT+T+N+DSSVQI+AEEAHPV+++DASAAR++L+K+QS+LSSA+++ AK
Sbjct: 81  EGNVKKIFVSSGTVTINEDSSVQILAEEAHPVENIDASAARELLTKSQSQLSSAANDQAK 140

Query: 134 AEAQIAVEVAEAL 146
           AEA+IAVEV+EAL
Sbjct: 141 AEAEIAVEVSEAL 153



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 53/72 (73%), Positives = 70/72 (97%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           KIFVSSGT+T+N+DSSVQI+AEEAHPV+++DASAAR++L+K+QS+LSSA+++ AKAEA+I
Sbjct: 86  KIFVSSGTVTINEDSSVQILAEEAHPVENIDASAARELLTKSQSQLSSAANDQAKAEAEI 145

Query: 207 AVEVAEALVAAA 218
           AVEV+EALV AA
Sbjct: 146 AVEVSEALVKAA 157


>gi|170052873|ref|XP_001862419.1| ATP synthase delta chain, mitochondrial [Culex quinquefasciatus]
 gi|167873641|gb|EDS37024.1| ATP synthase delta chain, mitochondrial [Culex quinquefasciatus]
          Length = 161

 Score =  209 bits (532), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 101/148 (68%), Positives = 123/148 (83%), Gaps = 4/148 (2%)

Query: 3   ARLVTSATRLAR----RGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVP 58
           ARL +S     R    RGYAD+M FTLA+ NKVFY + N++QVDVPSFSGAFGILP HVP
Sbjct: 9   ARLASSVRPALRVMQSRGYADEMAFTLAAANKVFYDSANIRQVDVPSFSGAFGILPKHVP 68

Query: 59  TLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLS 118
           TLA+LKPGV+TVYE +G  +K+FVSSGTITVN+DSSVQ++AEEAHPV+ LDA A R++LS
Sbjct: 69  TLAVLKPGVVTVYEQDGAVKKVFVSSGTITVNEDSSVQVLAEEAHPVEDLDAGACRELLS 128

Query: 119 KAQSELSSASSETAKAEAQIAVEVAEAL 146
            AQ++LSSAS++  +AEA IAVEVAEAL
Sbjct: 129 GAQNKLSSASTDVERAEAGIAVEVAEAL 156



 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/72 (72%), Positives = 64/72 (88%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K+FVSSGTITVN+DSSVQ++AEEAHPV+ LDA A R++LS AQ++LSSAS++  +AEA I
Sbjct: 89  KVFVSSGTITVNEDSSVQVLAEEAHPVEDLDAGACRELLSGAQNKLSSASTDVERAEAGI 148

Query: 207 AVEVAEALVAAA 218
           AVEVAEALV AA
Sbjct: 149 AVEVAEALVKAA 160


>gi|432101156|gb|ELK29440.1| ATP synthase subunit delta, mitochondrial [Myotis davidii]
          Length = 369

 Score =  208 bits (530), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 116/214 (54%), Positives = 148/214 (69%), Gaps = 3/214 (1%)

Query: 5   LVTSATRLARRGYADQMDFTLAS-GNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAIL 63
           L+ S   L RR +   +DF L   G +VF+   NV+QVDVP+ +GAFGIL  HVPTL +L
Sbjct: 156 LLISLQHLCRRAWV--LDFVLTDDGTEVFFNGANVRQVDVPTQTGAFGILAAHVPTLQVL 213

Query: 64  KPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSE 123
           +PG++ V+  +G + K FVSSG++TVN DSSVQ++AEEA  +D LD  AA+  L KAQSE
Sbjct: 214 RPGLVVVHAEDGTTSKYFVSSGSVTVNADSSVQLLAEEAVSLDMLDLGAAKANLEKAQSE 273

Query: 124 LSSASSETAKAEAQIAVEVAEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARD 183
           LS AS E  +AE QI +E  EAL   + SG++TVN DSSVQ++AEEA  +D LD  AA+ 
Sbjct: 274 LSGASDEAMRAEIQIRIEANEALVKALDSGSVTVNADSSVQLLAEEAVSLDMLDLGAAKA 333

Query: 184 VLSKAQSELSSASSETAKAEAQIAVEVAEALVAA 217
            L KAQSELS AS E  +AE QI +E  EALV A
Sbjct: 334 NLEKAQSELSGASDEAMRAEIQIRIEANEALVKA 367


>gi|158297424|ref|XP_317657.4| AGAP007841-PA [Anopheles gambiae str. PEST]
 gi|157015188|gb|EAA12214.5| AGAP007841-PA [Anopheles gambiae str. PEST]
          Length = 169

 Score =  207 bits (527), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 94/132 (71%), Positives = 117/132 (88%)

Query: 15  RGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETE 74
           RGYAD+M FTLA+ NKVFY + N++QVDVPSFSGAFGILP HVPTLA+LKPGV+TVYE +
Sbjct: 33  RGYADEMAFTLAAANKVFYDSANIRQVDVPSFSGAFGILPKHVPTLAVLKPGVVTVYEND 92

Query: 75  GVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKA 134
           G  +KIFVSSGT+TVN+D+SVQ++AEEAHPV+ LD+SA R++LS AQ++LSSAS +  +A
Sbjct: 93  GAVKKIFVSSGTVTVNEDASVQVLAEEAHPVEDLDSSACRELLSNAQTQLSSASGDKDRA 152

Query: 135 EAQIAVEVAEAL 146
           EA IA+EVAEAL
Sbjct: 153 EAAIAMEVAEAL 164



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 49/72 (68%), Positives = 64/72 (88%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           KIFVSSGT+TVN+D+SVQ++AEEAHPV+ LD+SA R++LS AQ++LSSAS +  +AEA I
Sbjct: 97  KIFVSSGTVTVNEDASVQVLAEEAHPVEDLDSSACRELLSNAQTQLSSASGDKDRAEAAI 156

Query: 207 AVEVAEALVAAA 218
           A+EVAEALV A+
Sbjct: 157 AMEVAEALVKAS 168


>gi|91081977|ref|XP_968285.1| PREDICTED: similar to ATP synthase delta chain, mitochondrial
           [Tribolium castaneum]
 gi|270008191|gb|EFA04639.1| hypothetical protein TcasGA2_TC013931 [Tribolium castaneum]
          Length = 158

 Score =  206 bits (525), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 93/133 (69%), Positives = 119/133 (89%)

Query: 14  RRGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYET 73
           +RGYAD+M FT A+GN+VFY  Q+V+QVDVPSFSG+FGILP HVPTLA+LKPGV+TV+E 
Sbjct: 21  KRGYADEMSFTFAAGNQVFYDAQSVRQVDVPSFSGSFGILPKHVPTLAVLKPGVVTVFEN 80

Query: 74  EGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAK 133
           +G  +KIFVSSGT+T+N+DSSVQ++AEEA PV+++D SAAR++LSKAQ ELSSA++E A+
Sbjct: 81  DGNVKKIFVSSGTVTINEDSSVQVLAEEAAPVENIDISAAREILSKAQGELSSAATEQAR 140

Query: 134 AEAQIAVEVAEAL 146
           AEA IA+EV EAL
Sbjct: 141 AEASIAIEVGEAL 153



 Score =  102 bits (255), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 51/72 (70%), Positives = 65/72 (90%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           KIFVSSGT+T+N+DSSVQ++AEEA PV+++D SAAR++LSKAQ ELSSA++E A+AEA I
Sbjct: 86  KIFVSSGTVTINEDSSVQVLAEEAAPVENIDISAAREILSKAQGELSSAATEQARAEASI 145

Query: 207 AVEVAEALVAAA 218
           A+EV EALV AA
Sbjct: 146 AIEVGEALVKAA 157


>gi|322802698|gb|EFZ22922.1| hypothetical protein SINV_15147 [Solenopsis invicta]
          Length = 191

 Score =  204 bits (518), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 98/147 (66%), Positives = 118/147 (80%), Gaps = 4/147 (2%)

Query: 4   RLVTSATRLARRGYAD----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPT 59
           R      R  RR YAD    +M FT A  N+VFY    ++QVDVPSFSGAFGILP HVPT
Sbjct: 40  RPFLRCVRSQRRTYADAAGNEMKFTFAGANQVFYDQAAIRQVDVPSFSGAFGILPKHVPT 99

Query: 60  LAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSK 119
           LA+LKPGV+TVYE +G ++KIFVSSGT+T+N+DSSVQI+AEEAHP+++LD SAARDVL+K
Sbjct: 100 LAVLKPGVVTVYEEDGSTKKIFVSSGTVTINEDSSVQILAEEAHPLENLDGSAARDVLNK 159

Query: 120 AQSELSSASSETAKAEAQIAVEVAEAL 146
           AQ +LSSA+S+  KAEA IAVEVAEAL
Sbjct: 160 AQQQLSSATSDIDKAEASIAVEVAEAL 186



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 54/71 (76%), Positives = 65/71 (91%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           KIFVSSGT+T+N+DSSVQI+AEEAHP+++LD SAARDVL+KAQ +LSSA+S+  KAEA I
Sbjct: 119 KIFVSSGTVTINEDSSVQILAEEAHPLENLDGSAARDVLNKAQQQLSSATSDIDKAEASI 178

Query: 207 AVEVAEALVAA 217
           AVEVAEALV A
Sbjct: 179 AVEVAEALVQA 189


>gi|239788326|dbj|BAH70851.1| ACYPI007021 [Acyrthosiphon pisum]
          Length = 161

 Score =  203 bits (516), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 89/133 (66%), Positives = 113/133 (84%)

Query: 1   MAARLVTSATRLARRGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTL 60
           + A+L    T+   R YADQM+FT A+ N++FY N+N+KQVDVPSFSG+FGILPNHVPTL
Sbjct: 10  LVAKLTQGPTKCFSRNYADQMNFTFAAANQIFYANKNIKQVDVPSFSGSFGILPNHVPTL 69

Query: 61  AILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKA 120
           A+L+PGV+TVYE EG S+KIFVSSGTITVN+DSSVQ++AEEAHP++ +D SAAR VL +A
Sbjct: 70  AVLRPGVVTVYEDEGTSKKIFVSSGTITVNEDSSVQVLAEEAHPIEDIDGSAARQVLQEA 129

Query: 121 QSELSSASSETAK 133
           QS+LS+AS + AK
Sbjct: 130 QSQLSTASGDVAK 142



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/72 (75%), Positives = 64/72 (88%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           KIFVSSGTITVN+DSSVQ++AEEAHP++ +D SAAR VL +AQS+LS+AS + AKAEA I
Sbjct: 88  KIFVSSGTITVNEDSSVQVLAEEAHPIEDIDGSAARQVLQEAQSQLSTASGDVAKAEAAI 147

Query: 207 AVEVAEALVAAA 218
           AVEVAEALV AA
Sbjct: 148 AVEVAEALVLAA 159


>gi|193709035|ref|XP_001943366.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like isoform 1
           [Acyrthosiphon pisum]
          Length = 161

 Score =  202 bits (515), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 88/133 (66%), Positives = 113/133 (84%)

Query: 1   MAARLVTSATRLARRGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTL 60
           + A+L    T+   R YADQM+FT A+ N++FY N+N+KQVDVPSFSG+FGILPNHVPTL
Sbjct: 10  LVAKLTQGPTKCFSRNYADQMNFTFAAANQIFYANKNIKQVDVPSFSGSFGILPNHVPTL 69

Query: 61  AILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKA 120
           A+L+PG++TVYE EG S+KIFVSSGTITVN+DSSVQ++AEEAHP++ +D SAAR VL +A
Sbjct: 70  AVLRPGIVTVYEDEGTSKKIFVSSGTITVNEDSSVQVLAEEAHPIEDIDGSAARQVLQEA 129

Query: 121 QSELSSASSETAK 133
           QS+LS+AS + AK
Sbjct: 130 QSQLSTASGDVAK 142



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/72 (75%), Positives = 64/72 (88%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           KIFVSSGTITVN+DSSVQ++AEEAHP++ +D SAAR VL +AQS+LS+AS + AKAEA I
Sbjct: 88  KIFVSSGTITVNEDSSVQVLAEEAHPIEDIDGSAARQVLQEAQSQLSTASGDVAKAEAAI 147

Query: 207 AVEVAEALVAAA 218
           AVEVAEALV AA
Sbjct: 148 AVEVAEALVLAA 159


>gi|307182759|gb|EFN69882.1| ATP synthase subunit delta, mitochondrial [Camponotus floridanus]
          Length = 162

 Score =  199 bits (505), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 92/137 (67%), Positives = 116/137 (84%), Gaps = 4/137 (2%)

Query: 14  RRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVIT 69
           RR YA    DQM FT A  N+VFY    ++QVDVPSFSGAFGILP HVPTLA+LKPGV+T
Sbjct: 21  RRTYAEVASDQMKFTFAGANQVFYDQAAIRQVDVPSFSGAFGILPKHVPTLAVLKPGVVT 80

Query: 70  VYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASS 129
           VYE +G ++K+FVSSGT+T+N+D+SVQI+AEEAHPV+++D+SAARD+L+KAQ +LSSA++
Sbjct: 81  VYEEDGSTKKVFVSSGTVTINEDNSVQILAEEAHPVENIDSSAARDILTKAQQQLSSATT 140

Query: 130 ETAKAEAQIAVEVAEAL 146
           +  KAEA IAVEV EAL
Sbjct: 141 DKDKAEAAIAVEVGEAL 157



 Score =  103 bits (257), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 50/72 (69%), Positives = 66/72 (91%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K+FVSSGT+T+N+D+SVQI+AEEAHPV+++D+SAARD+L+KAQ +LSSA+++  KAEA I
Sbjct: 90  KVFVSSGTVTINEDNSVQILAEEAHPVENIDSSAARDILTKAQQQLSSATTDKDKAEAAI 149

Query: 207 AVEVAEALVAAA 218
           AVEV EALV AA
Sbjct: 150 AVEVGEALVQAA 161


>gi|332022111|gb|EGI62433.1| ATP synthase subunit delta, mitochondrial [Acromyrmex echinatior]
          Length = 163

 Score =  197 bits (502), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 94/137 (68%), Positives = 114/137 (83%), Gaps = 4/137 (2%)

Query: 14  RRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVIT 69
           RR YA    +QM FT A  N+VFY    ++QVDVPSFSG+FGILP HVPTLA+LKPGV+T
Sbjct: 22  RRTYAEAAANQMKFTFAGANQVFYDQAVIRQVDVPSFSGSFGILPKHVPTLAVLKPGVVT 81

Query: 70  VYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASS 129
           +YE  G S+KIFVSSGT+T+N+D+SVQI+AEEAHPV+ LD +AARD+L+KAQ ELSSA+S
Sbjct: 82  IYEENGSSKKIFVSSGTVTINEDNSVQILAEEAHPVEHLDNAAARDILNKAQQELSSATS 141

Query: 130 ETAKAEAQIAVEVAEAL 146
           +  KAEA IAVEVAEAL
Sbjct: 142 DIDKAEAGIAVEVAEAL 158



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 53/71 (74%), Positives = 64/71 (90%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           KIFVSSGT+T+N+D+SVQI+AEEAHPV+ LD +AARD+L+KAQ ELSSA+S+  KAEA I
Sbjct: 91  KIFVSSGTVTINEDNSVQILAEEAHPVEHLDNAAARDILNKAQQELSSATSDIDKAEAGI 150

Query: 207 AVEVAEALVAA 217
           AVEVAEALV A
Sbjct: 151 AVEVAEALVQA 161


>gi|307203989|gb|EFN82893.1| ATP synthase subunit delta, mitochondrial [Harpegnathos saltator]
          Length = 162

 Score =  197 bits (500), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 94/149 (63%), Positives = 116/149 (77%), Gaps = 6/149 (4%)

Query: 4   RLVTSATRLARRGYAD------QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHV 57
           R      R  +R YAD      QM FT A  N+VFY    ++QVDVPSFSG+FGILP HV
Sbjct: 9   RPYLRCIRSQKRTYADAAAASDQMKFTFAGANQVFYDKAAIRQVDVPSFSGSFGILPKHV 68

Query: 58  PTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVL 117
           PTLA+LKPGV+TVYE  G ++KIFVSSG++T+N+D+SVQI+AEEAHPV+ LD +AA+D+L
Sbjct: 69  PTLAVLKPGVVTVYEESGTAKKIFVSSGSVTINEDNSVQILAEEAHPVEDLDNAAAKDIL 128

Query: 118 SKAQSELSSASSETAKAEAQIAVEVAEAL 146
           SKAQ +LSSASS+  KAEA IA+EVAEAL
Sbjct: 129 SKAQQQLSSASSDKDKAEATIAIEVAEAL 157


>gi|389611367|dbj|BAM19295.1| ATP synthase delta chain, mitochondrial [Papilio polytes]
          Length = 161

 Score =  194 bits (492), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 105/151 (69%), Positives = 124/151 (82%), Gaps = 7/151 (4%)

Query: 1   MAAR--LVTSATRLARRGYAD-----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGIL 53
           MA R  L T+A R+  RGYAD     +M  T A+GNKVFY  Q VKQ+DVPSFSG+FGIL
Sbjct: 3   MAFRNMLRTAARRMQVRGYADAPRGDEMALTFAAGNKVFYDKQVVKQIDVPSFSGSFGIL 62

Query: 54  PNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAA 113
           P HVPTLA+L+PGV+TV E +G   KIFVSSGTITVNDDSSVQ++AEEAHP++SLD SAA
Sbjct: 63  PKHVPTLAVLRPGVVTVVENDGKQTKIFVSSGTITVNDDSSVQVLAEEAHPLESLDRSAA 122

Query: 114 RDVLSKAQSELSSASSETAKAEAQIAVEVAE 144
           ++ LSKAQSEL+SA++E AKAEAQIAVEVAE
Sbjct: 123 QEALSKAQSELNSAANEKAKAEAQIAVEVAE 153



 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 58/73 (79%), Positives = 68/73 (93%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           KIFVSSGTITVNDDSSVQ++AEEAHP++SLD SAA++ LSKAQSEL+SA++E AKAEAQI
Sbjct: 88  KIFVSSGTITVNDDSSVQVLAEEAHPLESLDRSAAQEALSKAQSELNSAANEKAKAEAQI 147

Query: 207 AVEVAEALVAAAS 219
           AVEVAE +V AAS
Sbjct: 148 AVEVAEEVVKAAS 160


>gi|66517317|ref|XP_625060.1| PREDICTED: ATP synthase subunit delta, mitochondrial isoform 3
           [Apis mellifera]
 gi|328786450|ref|XP_003250792.1| PREDICTED: ATP synthase subunit delta, mitochondrial isoform 1
           [Apis mellifera]
          Length = 161

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 92/141 (65%), Positives = 115/141 (81%), Gaps = 5/141 (3%)

Query: 11  RLARRGYAD-----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKP 65
           R  RR YAD     +M FT A  N+VFY    +KQVDVPSFSG+FGILP HVPTLA+LKP
Sbjct: 16  RNQRRTYADKPVSDEMKFTFAGANQVFYDESVIKQVDVPSFSGSFGILPKHVPTLAVLKP 75

Query: 66  GVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELS 125
           GV+TVYE +G  +KIFVSSGT+T+N+++SVQI+AEEAHPV++LD+SA R++LSKAQ ELS
Sbjct: 76  GVVTVYEEDGSVKKIFVSSGTVTINENNSVQILAEEAHPVENLDSSAIRELLSKAQQELS 135

Query: 126 SASSETAKAEAQIAVEVAEAL 146
           SA++E  KA A IA+EV+EAL
Sbjct: 136 SATTEEDKAAATIAIEVSEAL 156



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 49/71 (69%), Positives = 64/71 (90%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           KIFVSSGT+T+N+++SVQI+AEEAHPV++LD+SA R++LSKAQ ELSSA++E  KA A I
Sbjct: 89  KIFVSSGTVTINENNSVQILAEEAHPVENLDSSAIRELLSKAQQELSSATTEEDKAAATI 148

Query: 207 AVEVAEALVAA 217
           A+EV+EALV A
Sbjct: 149 AIEVSEALVQA 159


>gi|328786452|ref|XP_003250793.1| PREDICTED: ATP synthase subunit delta, mitochondrial isoform 2
           [Apis mellifera]
          Length = 174

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 92/141 (65%), Positives = 115/141 (81%), Gaps = 5/141 (3%)

Query: 11  RLARRGYAD-----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKP 65
           R  RR YAD     +M FT A  N+VFY    +KQVDVPSFSG+FGILP HVPTLA+LKP
Sbjct: 29  RNQRRTYADKPVSDEMKFTFAGANQVFYDESVIKQVDVPSFSGSFGILPKHVPTLAVLKP 88

Query: 66  GVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELS 125
           GV+TVYE +G  +KIFVSSGT+T+N+++SVQI+AEEAHPV++LD+SA R++LSKAQ ELS
Sbjct: 89  GVVTVYEEDGSVKKIFVSSGTVTINENNSVQILAEEAHPVENLDSSAIRELLSKAQQELS 148

Query: 126 SASSETAKAEAQIAVEVAEAL 146
           SA++E  KA A IA+EV+EAL
Sbjct: 149 SATTEEDKAAATIAIEVSEAL 169



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 49/71 (69%), Positives = 64/71 (90%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           KIFVSSGT+T+N+++SVQI+AEEAHPV++LD+SA R++LSKAQ ELSSA++E  KA A I
Sbjct: 102 KIFVSSGTVTINENNSVQILAEEAHPVENLDSSAIRELLSKAQQELSSATTEEDKAAATI 161

Query: 207 AVEVAEALVAA 217
           A+EV+EALV A
Sbjct: 162 AIEVSEALVQA 172


>gi|157129669|ref|XP_001655447.1| ATP synthase delta chain, mitochondrial [Aedes aegypti]
 gi|403182488|gb|EJY57423.1| AAEL002504-PB [Aedes aegypti]
          Length = 161

 Score =  190 bits (483), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 101/148 (68%), Positives = 124/148 (83%), Gaps = 4/148 (2%)

Query: 3   ARLVTSATRLAR----RGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVP 58
           ARL  SA    R    RGYAD+M FTLA+ NKV+Y + +++QVDVPSFSGAFGILP HVP
Sbjct: 9   ARLAASARPALRSMQSRGYADEMAFTLAAANKVYYDSAHIRQVDVPSFSGAFGILPKHVP 68

Query: 59  TLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLS 118
           TLA+LKPGV+TVYE +G ++KIFVSSGTITVN+DSSVQ++AEEAHPV+ LD+ A R++LS
Sbjct: 69  TLAVLKPGVVTVYEQDGATKKIFVSSGTITVNEDSSVQVLAEEAHPVEDLDSGACREILS 128

Query: 119 KAQSELSSASSETAKAEAQIAVEVAEAL 146
            AQS+LSSAS++  +AEA IAVEVAEAL
Sbjct: 129 SAQSQLSSASTDKERAEAGIAVEVAEAL 156



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/72 (73%), Positives = 64/72 (88%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           KIFVSSGTITVN+DSSVQ++AEEAHPV+ LD+ A R++LS AQS+LSSAS++  +AEA I
Sbjct: 89  KIFVSSGTITVNEDSSVQVLAEEAHPVEDLDSGACREILSSAQSQLSSASTDKERAEAGI 148

Query: 207 AVEVAEALVAAA 218
           AVEVAEALV AA
Sbjct: 149 AVEVAEALVKAA 160


>gi|157129671|ref|XP_001655448.1| ATP synthase delta chain, mitochondrial [Aedes aegypti]
 gi|108882049|gb|EAT46274.1| AAEL002504-PA [Aedes aegypti]
          Length = 173

 Score =  189 bits (481), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 101/148 (68%), Positives = 124/148 (83%), Gaps = 4/148 (2%)

Query: 3   ARLVTSATRLAR----RGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVP 58
           ARL  SA    R    RGYAD+M FTLA+ NKV+Y + +++QVDVPSFSGAFGILP HVP
Sbjct: 21  ARLAASARPALRSMQSRGYADEMAFTLAAANKVYYDSAHIRQVDVPSFSGAFGILPKHVP 80

Query: 59  TLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLS 118
           TLA+LKPGV+TVYE +G ++KIFVSSGTITVN+DSSVQ++AEEAHPV+ LD+ A R++LS
Sbjct: 81  TLAVLKPGVVTVYEQDGATKKIFVSSGTITVNEDSSVQVLAEEAHPVEDLDSGACREILS 140

Query: 119 KAQSELSSASSETAKAEAQIAVEVAEAL 146
            AQS+LSSAS++  +AEA IAVEVAEAL
Sbjct: 141 SAQSQLSSASTDKERAEAGIAVEVAEAL 168



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/72 (73%), Positives = 64/72 (88%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           KIFVSSGTITVN+DSSVQ++AEEAHPV+ LD+ A R++LS AQS+LSSAS++  +AEA I
Sbjct: 101 KIFVSSGTITVNEDSSVQVLAEEAHPVEDLDSGACREILSSAQSQLSSASTDKERAEAGI 160

Query: 207 AVEVAEALVAAA 218
           AVEVAEALV AA
Sbjct: 161 AVEVAEALVKAA 172


>gi|380017791|ref|XP_003692828.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like [Apis
           florea]
          Length = 161

 Score =  189 bits (480), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 92/141 (65%), Positives = 114/141 (80%), Gaps = 5/141 (3%)

Query: 11  RLARRGYAD-----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKP 65
           R  RR YAD     +M FT A  N+VFY    +KQVDVPSFSG+FGILP HVPTLA+LKP
Sbjct: 16  RNQRRTYADKPISDEMKFTFAGANQVFYDESVIKQVDVPSFSGSFGILPKHVPTLAVLKP 75

Query: 66  GVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELS 125
           GV+TV+E +G  +KIFVSSGTIT+N+++SVQI+AEEAHPV++LD SA R++LSKAQ ELS
Sbjct: 76  GVVTVHEEDGSVKKIFVSSGTITINENNSVQILAEEAHPVENLDNSAVRELLSKAQQELS 135

Query: 126 SASSETAKAEAQIAVEVAEAL 146
           SA++E  KA A IA+EV+EAL
Sbjct: 136 SATTEQDKAAAAIAIEVSEAL 156



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/71 (70%), Positives = 63/71 (88%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           KIFVSSGTIT+N+++SVQI+AEEAHPV++LD SA R++LSKAQ ELSSA++E  KA A I
Sbjct: 89  KIFVSSGTITINENNSVQILAEEAHPVENLDNSAVRELLSKAQQELSSATTEQDKAAAAI 148

Query: 207 AVEVAEALVAA 217
           A+EV+EALV A
Sbjct: 149 AIEVSEALVQA 159


>gi|126697378|gb|ABO26646.1| mitochondrial ATP synthase delta chain [Haliotis discus discus]
          Length = 165

 Score =  189 bits (479), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 90/148 (60%), Positives = 118/148 (79%), Gaps = 7/148 (4%)

Query: 5   LVTSATRLA------RRGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVP 58
           L+    RLA      +RGYAD M FT+AS + ++Y    VKQVDVP+ SG+FGILP+HVP
Sbjct: 14  LLQQCARLAATQNVSKRGYAD-MAFTMASPSDIYYNEAKVKQVDVPALSGSFGILPDHVP 72

Query: 59  TLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLS 118
           +LA+LKPGV+TVYE +G ++K+FVSSG+IT+N+DSSVQ++AEEAHPVD LDAS  RD L+
Sbjct: 73  SLAVLKPGVVTVYEEDGSTKKVFVSSGSITINEDSSVQVLAEEAHPVDRLDASTIRDGLA 132

Query: 119 KAQSELSSASSETAKAEAQIAVEVAEAL 146
           KAQ + +SA+S+ AKAEAQI++E  EAL
Sbjct: 133 KAQQDFNSATSDKAKAEAQISLECYEAL 160



 Score = 96.3 bits (238), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 46/68 (67%), Positives = 59/68 (86%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K+FVSSG+IT+N+DSSVQ++AEEAHPVD LDAS  RD L+KAQ + +SA+S+ AKAEAQI
Sbjct: 93  KVFVSSGSITINEDSSVQVLAEEAHPVDRLDASTIRDGLAKAQQDFNSATSDKAKAEAQI 152

Query: 207 AVEVAEAL 214
           ++E  EAL
Sbjct: 153 SLECYEAL 160


>gi|389608735|dbj|BAM17977.1| ATP synthase delta chain, mitochondrial [Papilio xuthus]
          Length = 161

 Score =  187 bits (474), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 99/145 (68%), Positives = 120/145 (82%), Gaps = 5/145 (3%)

Query: 5   LVTSATRLARRGYAD-----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPT 59
           L T+A ++  RGYAD     +M  T A+GNKVFY  + VKQ+DVPSFSG+FGILP HVPT
Sbjct: 9   LRTAARKMQVRGYADAPKGDEMALTFAAGNKVFYDKKVVKQIDVPSFSGSFGILPKHVPT 68

Query: 60  LAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSK 119
           LA+L+PGV+TV E +G   KIFVSSGTITVNDDSSVQ++AEEAHP++SLD SAA++ LSK
Sbjct: 69  LAVLRPGVVTVVENDGKQTKIFVSSGTITVNDDSSVQVLAEEAHPLESLDRSAAQEALSK 128

Query: 120 AQSELSSASSETAKAEAQIAVEVAE 144
           AQSEL+SA++E AKAEA IAVEVAE
Sbjct: 129 AQSELNSAANEKAKAEALIAVEVAE 153



 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 56/73 (76%), Positives = 67/73 (91%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           KIFVSSGTITVNDDSSVQ++AEEAHP++SLD SAA++ LSKAQSEL+SA++E AKAEA I
Sbjct: 88  KIFVSSGTITVNDDSSVQVLAEEAHPLESLDRSAAQEALSKAQSELNSAANEKAKAEALI 147

Query: 207 AVEVAEALVAAAS 219
           AVEVAE +V AA+
Sbjct: 148 AVEVAEEVVKAAT 160


>gi|197260762|gb|ACH56881.1| mitochondrial F1F0-ATP synthase subunit delta/ATP16 [Simulium
           vittatum]
          Length = 157

 Score =  186 bits (472), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 98/148 (66%), Positives = 123/148 (83%), Gaps = 6/148 (4%)

Query: 3   ARLVTSATRLAR----RGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVP 58
           ARL+T  TR  R    R YAD+M FTLA+ NKVFY +Q+V+QVDVPS SGAFGILP HVP
Sbjct: 7   ARLLT--TRGLRAMQSRSYADEMSFTLAAANKVFYDSQSVRQVDVPSMSGAFGILPKHVP 64

Query: 59  TLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLS 118
           T+A LKPGV+ V E +G S++IFVSSGTITVN+D+SVQ++AEEAHPV+SLDA+A R++ +
Sbjct: 65  TIAALKPGVVNVIENDGTSKEIFVSSGTITVNEDASVQVLAEEAHPVESLDAAACREIFA 124

Query: 119 KAQSELSSASSETAKAEAQIAVEVAEAL 146
            AQS+ +SAS++ AKAEA IA+EVAEAL
Sbjct: 125 SAQSQAASASTDVAKAEAAIALEVAEAL 152



 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 50/72 (69%), Positives = 65/72 (90%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           +IFVSSGTITVN+D+SVQ++AEEAHPV+SLDA+A R++ + AQS+ +SAS++ AKAEA I
Sbjct: 85  EIFVSSGTITVNEDASVQVLAEEAHPVESLDAAACREIFASAQSQAASASTDVAKAEAAI 144

Query: 207 AVEVAEALVAAA 218
           A+EVAEALV AA
Sbjct: 145 ALEVAEALVKAA 156


>gi|328796228|gb|AEB40303.1| mitochondrial ATP synthase delta subunit precursor [Litopenaeus
           vannamei]
          Length = 158

 Score =  185 bits (470), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 91/146 (62%), Positives = 117/146 (80%), Gaps = 1/146 (0%)

Query: 2   AARLVTSATRLARRGYAD-QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTL 60
           A+ LV    R+  R Y+D  M FT AS N+VFY + NV+QVDVPSFSG+FGILP HVP+L
Sbjct: 6   ASTLVRQVPRMGARAYSDAPMAFTFASQNQVFYNSANVRQVDVPSFSGSFGILPAHVPSL 65

Query: 61  AILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKA 120
           A+LKPGV+TV+E +G ++K FVSSG +T+N+DSSVQI+AEEA  V+ LD ++ARD+LSKA
Sbjct: 66  AVLKPGVMTVFEGDGTAKKFFVSSGIVTINEDSSVQILAEEAAGVEDLDLASARDLLSKA 125

Query: 121 QSELSSASSETAKAEAQIAVEVAEAL 146
           QSE ++A +E AKA+A IAVEVAE L
Sbjct: 126 QSEANAAGTEEAKAQALIAVEVAEEL 151



 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 49/74 (66%), Positives = 61/74 (82%)

Query: 145 ALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEA 204
           A K FVSSG +T+N+DSSVQI+AEEA  V+ LD ++ARD+LSKAQSE ++A +E AKA+A
Sbjct: 82  AKKFFVSSGIVTINEDSSVQILAEEAAGVEDLDLASARDLLSKAQSEANAAGTEEAKAQA 141

Query: 205 QIAVEVAEALVAAA 218
            IAVEVAE LV AA
Sbjct: 142 LIAVEVAEELVKAA 155


>gi|56462140|gb|AAV91353.1| ATP synthase 1 [Lonomia obliqua]
          Length = 161

 Score =  183 bits (464), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 90/134 (67%), Positives = 106/134 (79%), Gaps = 5/134 (3%)

Query: 5   LVTSATRLARRGYAD-----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPT 59
           L  S  R   R YAD     +M  T A+GNKVFY  Q VKQ+DVPSFSGAFGILP HVPT
Sbjct: 9   LRGSVKRFQARLYADAPKGDEMALTFAAGNKVFYDKQVVKQIDVPSFSGAFGILPKHVPT 68

Query: 60  LAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSK 119
           LA+L+PGV+TV E +G   KIFVSSGT+TVNDDSSVQ++AEEAHP++SLD SAA++ LSK
Sbjct: 69  LAVLRPGVVTVIENDGKQSKIFVSSGTVTVNDDSSVQVLAEEAHPLESLDRSAAQEALSK 128

Query: 120 AQSELSSASSETAK 133
           AQSELSSAS++ AK
Sbjct: 129 AQSELSSASNDKAK 142



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/55 (78%), Positives = 52/55 (94%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAK 201
           KIFVSSGT+TVNDDSSVQ++AEEAHP++SLD SAA++ LSKAQSELSSAS++ AK
Sbjct: 88  KIFVSSGTVTVNDDSSVQVLAEEAHPLESLDRSAAQEALSKAQSELSSASNDKAK 142


>gi|151301059|ref|NP_001093091.1| H+ transporting ATP synthase delta subunit [Bombyx mori]
 gi|95102732|gb|ABF51307.1| H+ transporting ATP synthase delta subunit [Bombyx mori]
          Length = 161

 Score =  182 bits (463), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 97/143 (67%), Positives = 116/143 (81%), Gaps = 5/143 (3%)

Query: 9   ATRLARRGYAD-----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAIL 63
           A RL  R YAD     +M  T A+GNKVFY  Q VKQ+DVPSFSGAFGILP HVPTLA+L
Sbjct: 13  ARRLQVRNYADAPKGDEMALTFAAGNKVFYDKQVVKQIDVPSFSGAFGILPKHVPTLAVL 72

Query: 64  KPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSE 123
           +PGV+T+ E +G   KIFVSSGTITVNDDSSVQ++AEEAHP++S+D SAA++ LSKAQSE
Sbjct: 73  RPGVVTILENDGKQNKIFVSSGTITVNDDSSVQVLAEEAHPLESIDRSAAQEALSKAQSE 132

Query: 124 LSSASSETAKAEAQIAVEVAEAL 146
            +SAS+E AKAEA IA+EVAE +
Sbjct: 133 FNSASNEKAKAEAAIALEVAEEI 155



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/73 (75%), Positives = 66/73 (90%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           KIFVSSGTITVNDDSSVQ++AEEAHP++S+D SAA++ LSKAQSE +SAS+E AKAEA I
Sbjct: 88  KIFVSSGTITVNDDSSVQVLAEEAHPLESIDRSAAQEALSKAQSEFNSASNEKAKAEAAI 147

Query: 207 AVEVAEALVAAAS 219
           A+EVAE +V AAS
Sbjct: 148 ALEVAEEIVKAAS 160


>gi|383862935|ref|XP_003706938.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like
           [Megachile rotundata]
          Length = 160

 Score =  180 bits (456), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 84/124 (67%), Positives = 103/124 (83%), Gaps = 4/124 (3%)

Query: 11  RLARRGYAD----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPG 66
           R  RR YAD    QM FT A  N+VFY    VKQ+DVPSFSG+FGILP HVPTLA+LKPG
Sbjct: 16  RNQRRTYADAPGDQMKFTFAGANQVFYDQAVVKQIDVPSFSGSFGILPKHVPTLAVLKPG 75

Query: 67  VITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSS 126
           V+TVYE  G ++KIFVSSGT+T+N+++SVQ++AEEAHPV+++D SAARD+LSKAQ +LSS
Sbjct: 76  VVTVYEEGGATKKIFVSSGTVTINENNSVQVLAEEAHPVENIDNSAARDILSKAQQQLSS 135

Query: 127 ASSE 130
           ASSE
Sbjct: 136 ASSE 139



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/72 (73%), Positives = 66/72 (91%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           KIFVSSGT+T+N+++SVQ++AEEAHPV+++D SAARD+LSKAQ +LSSASSE  +AEA I
Sbjct: 88  KIFVSSGTVTINENNSVQVLAEEAHPVENIDNSAARDILSKAQQQLSSASSEKDRAEAAI 147

Query: 207 AVEVAEALVAAA 218
           AVEVAEALV AA
Sbjct: 148 AVEVAEALVQAA 159


>gi|350420093|ref|XP_003492396.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like isoform 2
           [Bombus impatiens]
          Length = 174

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 82/128 (64%), Positives = 105/128 (82%), Gaps = 5/128 (3%)

Query: 11  RLARRGYAD-----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKP 65
           R  +R YAD     +M FTLA  N+VFY    ++QVDVPSFSG+FGILP HVPTLA+LKP
Sbjct: 29  RNQKRTYADAPVSNEMKFTLAGANQVFYNESVIRQVDVPSFSGSFGILPKHVPTLAVLKP 88

Query: 66  GVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELS 125
           GV+TVYE +G  +K+FVSSGT+T+N+++SVQI+AEEAHPV++LD +AAR++LSKAQ +LS
Sbjct: 89  GVVTVYEEDGTVKKVFVSSGTVTINENNSVQILAEEAHPVENLDGTAARELLSKAQQQLS 148

Query: 126 SASSETAK 133
           SASSE  K
Sbjct: 149 SASSEQDK 156



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/71 (73%), Positives = 65/71 (91%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K+FVSSGT+T+N+++SVQI+AEEAHPV++LD +AAR++LSKAQ +LSSASSE  KAEA I
Sbjct: 102 KVFVSSGTVTINENNSVQILAEEAHPVENLDGTAARELLSKAQQQLSSASSEQDKAEAAI 161

Query: 207 AVEVAEALVAA 217
           AVEVAEALV A
Sbjct: 162 AVEVAEALVQA 172


>gi|350420090|ref|XP_003492395.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like isoform 1
           [Bombus impatiens]
          Length = 161

 Score =  178 bits (451), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 82/128 (64%), Positives = 105/128 (82%), Gaps = 5/128 (3%)

Query: 11  RLARRGYAD-----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKP 65
           R  +R YAD     +M FTLA  N+VFY    ++QVDVPSFSG+FGILP HVPTLA+LKP
Sbjct: 16  RNQKRTYADAPVSNEMKFTLAGANQVFYNESVIRQVDVPSFSGSFGILPKHVPTLAVLKP 75

Query: 66  GVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELS 125
           GV+TVYE +G  +K+FVSSGT+T+N+++SVQI+AEEAHPV++LD +AAR++LSKAQ +LS
Sbjct: 76  GVVTVYEEDGTVKKVFVSSGTVTINENNSVQILAEEAHPVENLDGTAARELLSKAQQQLS 135

Query: 126 SASSETAK 133
           SASSE  K
Sbjct: 136 SASSEQDK 143



 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/71 (73%), Positives = 65/71 (91%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K+FVSSGT+T+N+++SVQI+AEEAHPV++LD +AAR++LSKAQ +LSSASSE  KAEA I
Sbjct: 89  KVFVSSGTVTINENNSVQILAEEAHPVENLDGTAARELLSKAQQQLSSASSEQDKAEAAI 148

Query: 207 AVEVAEALVAA 217
           AVEVAEALV A
Sbjct: 149 AVEVAEALVQA 159


>gi|443713752|gb|ELU06452.1| hypothetical protein CAPTEDRAFT_164374 [Capitella teleta]
          Length = 166

 Score =  177 bits (448), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 87/130 (66%), Positives = 105/130 (80%), Gaps = 1/130 (0%)

Query: 15  RGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETE 74
           R YAD M FT AS  ++FY + NV QVDVPS +G+FGILP HVP LA+LKPGV+TV+E +
Sbjct: 29  RNYAD-MSFTFASPAEIFYNSANVAQVDVPSMTGSFGILPQHVPALAVLKPGVVTVFEGD 87

Query: 75  GVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKA 134
           G S+K FVSSG+IT+NDDSSVQI+AEEA PV+ LD+ AAR+ LS AQ E +SAS+E AKA
Sbjct: 88  GASKKFFVSSGSITINDDSSVQILAEEAVPVEHLDSQAAREGLSLAQQEAASASTEQAKA 147

Query: 135 EAQIAVEVAE 144
           EAQIAVE  E
Sbjct: 148 EAQIAVECFE 157



 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 48/72 (66%), Positives = 58/72 (80%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG+IT+NDDSSVQI+AEEA PV+ LD+ AAR+ LS AQ E +SAS+E AKAEAQI
Sbjct: 92  KFFVSSGSITINDDSSVQILAEEAVPVEHLDSQAAREGLSLAQQEAASASTEQAKAEAQI 151

Query: 207 AVEVAEALVAAA 218
           AVE  E ++  A
Sbjct: 152 AVECFEEVIKVA 163


>gi|340720179|ref|XP_003398519.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like isoform 2
           [Bombus terrestris]
          Length = 174

 Score =  176 bits (445), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 82/128 (64%), Positives = 105/128 (82%), Gaps = 5/128 (3%)

Query: 11  RLARRGYAD-----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKP 65
           R  +R +AD     +M FTLA  N+VFY    VKQVDVPSFSG+FGILP HVPTLA+LKP
Sbjct: 29  RNQKRTFADAPVSNEMKFTLAGANQVFYDESVVKQVDVPSFSGSFGILPKHVPTLAVLKP 88

Query: 66  GVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELS 125
           GV+TVYE +G  +K+FVSSGT+T+N+++SVQI+AEEAHP+++LD +AAR++LSKAQ +LS
Sbjct: 89  GVVTVYEEDGAVKKVFVSSGTVTINENNSVQILAEEAHPLENLDGTAARELLSKAQQQLS 148

Query: 126 SASSETAK 133
           SASSE  K
Sbjct: 149 SASSEQDK 156



 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 51/71 (71%), Positives = 65/71 (91%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K+FVSSGT+T+N+++SVQI+AEEAHP+++LD +AAR++LSKAQ +LSSASSE  KAEA I
Sbjct: 102 KVFVSSGTVTINENNSVQILAEEAHPLENLDGTAARELLSKAQQQLSSASSEQDKAEAAI 161

Query: 207 AVEVAEALVAA 217
           AVEVAEALV A
Sbjct: 162 AVEVAEALVQA 172


>gi|340720177|ref|XP_003398518.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like isoform 1
           [Bombus terrestris]
          Length = 161

 Score =  176 bits (445), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 82/128 (64%), Positives = 105/128 (82%), Gaps = 5/128 (3%)

Query: 11  RLARRGYAD-----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKP 65
           R  +R +AD     +M FTLA  N+VFY    VKQVDVPSFSG+FGILP HVPTLA+LKP
Sbjct: 16  RNQKRTFADAPVSNEMKFTLAGANQVFYDESVVKQVDVPSFSGSFGILPKHVPTLAVLKP 75

Query: 66  GVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELS 125
           GV+TVYE +G  +K+FVSSGT+T+N+++SVQI+AEEAHP+++LD +AAR++LSKAQ +LS
Sbjct: 76  GVVTVYEEDGAVKKVFVSSGTVTINENNSVQILAEEAHPLENLDGTAARELLSKAQQQLS 135

Query: 126 SASSETAK 133
           SASSE  K
Sbjct: 136 SASSEQDK 143



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/71 (71%), Positives = 65/71 (91%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K+FVSSGT+T+N+++SVQI+AEEAHP+++LD +AAR++LSKAQ +LSSASSE  KAEA I
Sbjct: 89  KVFVSSGTVTINENNSVQILAEEAHPLENLDGTAARELLSKAQQQLSSASSEQDKAEAAI 148

Query: 207 AVEVAEALVAA 217
           AVEVAEALV A
Sbjct: 149 AVEVAEALVQA 159


>gi|312383378|gb|EFR28490.1| hypothetical protein AND_03504 [Anopheles darlingi]
          Length = 159

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 80/119 (67%), Positives = 101/119 (84%), Gaps = 4/119 (3%)

Query: 4   RLVT---SATRLAR-RGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPT 59
           RLVT    A R+ + R Y+D+M FTLA+ NKVFY + N++QVDVPSFSGAFGILP HVPT
Sbjct: 8   RLVTYSKPALRMVQSRSYSDEMAFTLAAANKVFYDSANIRQVDVPSFSGAFGILPKHVPT 67

Query: 60  LAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLS 118
           LA+LKPGV+TVYE +G  +KIFVSSGT+TVN+D+SVQ++AEEAHPV+ LDASA R++L+
Sbjct: 68  LAVLKPGVVTVYENDGAQKKIFVSSGTVTVNEDASVQVLAEEAHPVEDLDASACRELLT 126



 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/40 (72%), Positives = 38/40 (95%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLS 186
           KIFVSSGT+TVN+D+SVQ++AEEAHPV+ LDASA R++L+
Sbjct: 87  KIFVSSGTVTVNEDASVQVLAEEAHPVEDLDASACRELLT 126


>gi|427786617|gb|JAA58760.1| Putative atp synthase h+ transporting mitochondrial f1 complex
           delta subunit precursor [Rhipicephalus pulchellus]
          Length = 166

 Score =  173 bits (439), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 90/152 (59%), Positives = 109/152 (71%), Gaps = 7/152 (4%)

Query: 2   AARLVTSATRL------ARRGYAD-QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILP 54
           A R V   TRL        R YAD QM  T +S  + FY   +VKQVDVPS+SG FGILP
Sbjct: 10  ACRYVLPRTRLLASQSVQSRTYADGQMPLTFSSPAETFYDKVDVKQVDVPSYSGNFGILP 69

Query: 55  NHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAAR 114
           NHVP LA++KPGV+TV+  +G ++K FVSSGTI++N+DSSVQ++AE A PVD LD    R
Sbjct: 70  NHVPALAVIKPGVVTVFPKDGEAKKYFVSSGTISINEDSSVQVLAEAAVPVDRLDPQLCR 129

Query: 115 DVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           D L+KAQ  L SASS+TA+AEAQI VEV EAL
Sbjct: 130 DGLTKAQQALQSASSDTARAEAQIEVEVHEAL 161



 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 50/75 (66%), Positives = 58/75 (77%)

Query: 143 AEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKA 202
            EA K FVSSGTI++N+DSSVQ++AE A PVD LD    RD L+KAQ  L SASS+TA+A
Sbjct: 90  GEAKKYFVSSGTISINEDSSVQVLAEAAVPVDRLDPQLCRDGLTKAQQALQSASSDTARA 149

Query: 203 EAQIAVEVAEALVAA 217
           EAQI VEV EALV A
Sbjct: 150 EAQIEVEVHEALVKA 164


>gi|260908550|gb|ACX53994.1| ATP synthase H+ transporting mitochondrial F1 complex delta subunit
           precursor [Rhipicephalus sanguineus]
          Length = 166

 Score =  173 bits (438), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 89/145 (61%), Positives = 110/145 (75%), Gaps = 2/145 (1%)

Query: 3   ARLVTSATRLARRGYAD-QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLA 61
           ARL+ S + +  R YAD QM  T AS  + FY   +VKQVDVPS+SG FGILPNHVP LA
Sbjct: 18  ARLLASQS-VQSRTYADGQMPLTFASPAETFYDKVDVKQVDVPSYSGFFGILPNHVPALA 76

Query: 62  ILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQ 121
           ++KPGV+TV+  +G ++K FVSSGTI++N+DSSVQ++AE A PVD LD    RD L+KAQ
Sbjct: 77  VIKPGVVTVFPKDGEAKKYFVSSGTISINEDSSVQVLAEAAVPVDRLDPQLCRDGLTKAQ 136

Query: 122 SELSSASSETAKAEAQIAVEVAEAL 146
             L SASS+TA+AEAQI VEV EAL
Sbjct: 137 QALQSASSDTARAEAQIEVEVHEAL 161



 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 49/75 (65%), Positives = 58/75 (77%)

Query: 143 AEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKA 202
            EA K FVSSGTI++N+DSSVQ++AE A PVD LD    RD L+KAQ  L SASS+TA+A
Sbjct: 90  GEAKKYFVSSGTISINEDSSVQVLAEAAVPVDRLDPQLCRDGLTKAQQALQSASSDTARA 149

Query: 203 EAQIAVEVAEALVAA 217
           EAQI VEV EAL+ A
Sbjct: 150 EAQIEVEVHEALIKA 164


>gi|288856335|ref|NP_001165818.1| ATP synthase subunit delta, mitochondrial [Nasonia vitripennis]
 gi|288856337|ref|NP_001165819.1| ATP synthase subunit delta, mitochondrial [Nasonia vitripennis]
          Length = 161

 Score =  170 bits (431), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 80/119 (67%), Positives = 94/119 (78%), Gaps = 5/119 (4%)

Query: 4   RLVTSATRLARRGYAD-----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVP 58
           R     TR  +R YAD     QM FT A  N+VFY    VKQVDVPSFSG+FGILP HVP
Sbjct: 9   RPFLRCTRTQKRFYADAPAGDQMKFTFAGANQVFYDQAVVKQVDVPSFSGSFGILPKHVP 68

Query: 59  TLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVL 117
           TLA+LKPGV+TVYE  G S++IFVSSGT+T+N+DSSVQ++AEEAHPVDSLD+SAARD+L
Sbjct: 69  TLAVLKPGVVTVYEQGGDSKRIFVSSGTVTINEDSSVQVLAEEAHPVDSLDSSAARDIL 127



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/39 (79%), Positives = 39/39 (100%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVL 185
           +IFVSSGT+T+N+DSSVQ++AEEAHPVDSLD+SAARD+L
Sbjct: 89  RIFVSSGTVTINEDSSVQVLAEEAHPVDSLDSSAARDIL 127


>gi|209738040|gb|ACI69889.1| ATP synthase subunit delta, mitochondrial precursor [Salmo salar]
          Length = 160

 Score =  166 bits (421), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 84/154 (54%), Positives = 111/154 (72%), Gaps = 8/154 (5%)

Query: 1   MAARLVTSATRLAR--RGYAD------QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGI 52
           MAAR +  +  + R  R YAD      QM FT AS  +V++   +VKQVDVP+ +GAFGI
Sbjct: 2   MAARFLRRSLPVLRQARCYADAPSSSSQMSFTFASPTQVYFKEASVKQVDVPTLTGAFGI 61

Query: 53  LPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASA 112
           LP HVPTL +L+PGV+TV+  +G + K FVSSG+ITVN DSSVQ++AEEA P+D LD +A
Sbjct: 62  LPAHVPTLQVLRPGVVTVFNDDGSAAKFFVSSGSITVNADSSVQLLAEEAFPLDQLDVAA 121

Query: 113 ARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           A+  L KAQSE++SAS E A+AE QI ++  EA+
Sbjct: 122 AKANLEKAQSEMASASDEAARAEVQINIDANEAI 155


>gi|164422323|gb|ABY55259.1| mitochondrial ATP synthase H+ transporting F1 complex delta subunit
           [Oncorhynchus masou formosanus]
          Length = 160

 Score =  166 bits (421), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 84/154 (54%), Positives = 111/154 (72%), Gaps = 8/154 (5%)

Query: 1   MAARLVTSATRLAR--RGYAD------QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGI 52
           MAAR +  +  + R  R YAD      QM FT AS  +V++   +VKQVDVP+ +GAFGI
Sbjct: 2   MAARFLRCSLPVLRQARCYADAPSGSAQMSFTFASPTQVYFKEASVKQVDVPTLTGAFGI 61

Query: 53  LPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASA 112
           LP HVPTL +L+PGV+TV+  +G + K FVSSG+ITVN DSSVQ++AEEA P+D LD +A
Sbjct: 62  LPAHVPTLQVLRPGVVTVFNDDGSAAKFFVSSGSITVNADSSVQLLAEEAFPLDQLDVAA 121

Query: 113 ARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           A+  L KAQSE++SAS E A+AE QI ++  EA+
Sbjct: 122 AKVNLEKAQSEMASASDEAARAEVQINIDANEAI 155


>gi|391331721|ref|XP_003740291.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like
           [Metaseiulus occidentalis]
          Length = 162

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 83/140 (59%), Positives = 108/140 (77%), Gaps = 3/140 (2%)

Query: 11  RLARRGYAD---QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGV 67
           R++ RG+AD    M FTLAS + +++   +V+QVDVPS+SG FGILPNHV T A++KPGV
Sbjct: 16  RVSARGFADAPTGMAFTLASPSNLYFHGADVRQVDVPSYSGNFGILPNHVSTSAVIKPGV 75

Query: 68  ITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSA 127
           + VY  EG  Q+ FVS+GTITVN+DSSVQ+IAE+A  VD LD S     L+KAQ +L+SA
Sbjct: 76  VVVYPKEGDLQRFFVSAGTITVNEDSSVQVIAEQAIAVDQLDGSLVGAGLAKAQQQLASA 135

Query: 128 SSETAKAEAQIAVEVAEALK 147
           S+ETAKAEAQI +EV EA++
Sbjct: 136 STETAKAEAQILIEVHEAMQ 155



 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 44/68 (64%), Positives = 55/68 (80%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           + FVS+GTITVN+DSSVQ+IAE+A  VD LD S     L+KAQ +L+SAS+ETAKAEAQI
Sbjct: 87  RFFVSAGTITVNEDSSVQVIAEQAIAVDQLDGSLVGAGLAKAQQQLASASTETAKAEAQI 146

Query: 207 AVEVAEAL 214
            +EV EA+
Sbjct: 147 LIEVHEAM 154


>gi|348504712|ref|XP_003439905.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like
           [Oreochromis niloticus]
          Length = 160

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 83/154 (53%), Positives = 111/154 (72%), Gaps = 8/154 (5%)

Query: 1   MAARLVTSATRLAR--RGYAD------QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGI 52
           MAARL+  A  + R  R YA+      QM FT AS  +V++   +VKQVDVP+ +GAFGI
Sbjct: 2   MAARLLRRALPVLRQTRCYAEAASGAPQMSFTFASPTQVYFKEASVKQVDVPTLTGAFGI 61

Query: 53  LPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASA 112
           LP HVPTL +L+PGV+TV+  +G S K FVSSG++TVN DSSVQ++AEEA P+D LD +A
Sbjct: 62  LPAHVPTLQVLRPGVVTVFNEDGSSAKYFVSSGSVTVNADSSVQLLAEEAFPLDQLDIAA 121

Query: 113 ARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           AR  L KAQ++L+  + E A+AE QI++E  EA+
Sbjct: 122 ARANLEKAQADLAGTTDEAARAEVQISIEANEAI 155



 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/71 (57%), Positives = 55/71 (77%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN DSSVQ++AEEA P+D LD +AAR  L KAQ++L+  + E A+AE QI
Sbjct: 88  KYFVSSGSVTVNADSSVQLLAEEAFPLDQLDIAAARANLEKAQADLAGTTDEAARAEVQI 147

Query: 207 AVEVAEALVAA 217
           ++E  EA+V A
Sbjct: 148 SIEANEAIVKA 158


>gi|209736294|gb|ACI69016.1| ATP synthase subunit delta, mitochondrial precursor [Salmo salar]
          Length = 160

 Score =  162 bits (411), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 82/154 (53%), Positives = 110/154 (71%), Gaps = 8/154 (5%)

Query: 1   MAARLVTSATRLAR--RGYAD------QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGI 52
           MAAR +  +  + R  R YA+      QM FT AS  +V++   +VKQVDVP+ +GAFGI
Sbjct: 2   MAARFLRRSLPVLRQARCYAEAASGSAQMSFTFASPTQVYFKEASVKQVDVPTLTGAFGI 61

Query: 53  LPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASA 112
           LP HVPTL +L+PGV+TV+  +G + K FVSSG+ITVN DSSVQ++AEEA P+D LD +A
Sbjct: 62  LPAHVPTLQVLRPGVVTVFNDDGSATKFFVSSGSITVNADSSVQLLAEEAFPLDQLDVAA 121

Query: 113 ARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           A+  L KAQSE++S S E A+AE QI ++  EA+
Sbjct: 122 AKVNLEKAQSEMASVSDEAARAEVQINIDANEAI 155


>gi|41152365|ref|NP_956262.1| ATP synthase subunit delta, mitochondrial [Danio rerio]
 gi|37589805|gb|AAH59627.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit [Danio rerio]
 gi|40675642|gb|AAH65042.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit [Danio rerio]
          Length = 159

 Score =  162 bits (410), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 79/136 (58%), Positives = 103/136 (75%), Gaps = 4/136 (2%)

Query: 15  RGYAD----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITV 70
           R YAD    QM FT AS  +VF+   +VKQ+DVP+ +GAFGILP HVPTL +L+PGV+TV
Sbjct: 19  RSYADAPSAQMSFTFASPTEVFFKEASVKQIDVPTLTGAFGILPAHVPTLQVLRPGVVTV 78

Query: 71  YETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
           +  +G S+K FVSSG++TVN DSSVQ++AEEA P++SLD +AA+  L KAQSEL SAS E
Sbjct: 79  FNDDGSSKKYFVSSGSVTVNADSSVQLLAEEAFPLESLDVAAAKANLEKAQSELVSASDE 138

Query: 131 TAKAEAQIAVEVAEAL 146
             +AE  I++E  EA+
Sbjct: 139 ATRAEVLISIEANEAI 154


>gi|47208131|emb|CAF92415.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 160

 Score =  162 bits (410), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 84/154 (54%), Positives = 109/154 (70%), Gaps = 8/154 (5%)

Query: 1   MAARLVTSATRLAR--RGYAD------QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGI 52
           MAAR +  A  + R  R YA+      QM FT AS  +VF+   +VKQVDVP+ +GAFGI
Sbjct: 2   MAARFLRRAFPILRQTRSYAEAATGAPQMSFTFASPTQVFFKEASVKQVDVPTLTGAFGI 61

Query: 53  LPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASA 112
           LP HVPTL +L+PGV+TV+  +G S K FVSSG++TVN DSSVQ++AEEA P+D LD +A
Sbjct: 62  LPAHVPTLQVLRPGVVTVFSDDGSSVKYFVSSGSVTVNADSSVQLLAEEAVPLDQLDIAA 121

Query: 113 ARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           A+  L KAQS L+  S E A+AE QI++E  EA+
Sbjct: 122 AKANLEKAQSALAGTSDEAARAEVQISIEANEAI 155



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/72 (56%), Positives = 55/72 (76%)

Query: 146 LKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 205
           +K FVSSG++TVN DSSVQ++AEEA P+D LD +AA+  L KAQS L+  S E A+AE Q
Sbjct: 87  VKYFVSSGSVTVNADSSVQLLAEEAVPLDQLDIAAAKANLEKAQSALAGTSDEAARAEVQ 146

Query: 206 IAVEVAEALVAA 217
           I++E  EA++ A
Sbjct: 147 ISIEANEAIIKA 158


>gi|195350626|ref|XP_002041840.1| GM11414 [Drosophila sechellia]
 gi|194123645|gb|EDW45688.1| GM11414 [Drosophila sechellia]
          Length = 157

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 78/135 (57%), Positives = 104/135 (77%), Gaps = 2/135 (1%)

Query: 3   ARLVTS-ATRLAR-RGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTL 60
           ARL+ +   RLA+ R Y+D+M  T A+ NK FY    V+Q+DVPSFSG+FGIL  HVPTL
Sbjct: 7   ARLLAARGARLAQNRSYSDEMKLTFAAANKTFYDAAVVRQIDVPSFSGSFGILAKHVPTL 66

Query: 61  AILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKA 120
           A+LKPGV+ V E +G + K FVSSG++TVN+DSSVQ++AEEAH ++ +DA+ AR +L+K 
Sbjct: 67  AVLKPGVVQVVENDGKTLKFFVSSGSVTVNEDSSVQVLAEEAHNIEDIDANEARQLLAKY 126

Query: 121 QSELSSASSETAKAE 135
           QS+LSSA  E AKA+
Sbjct: 127 QSQLSSAGDEKAKAQ 141



 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 49/76 (64%), Positives = 63/76 (82%)

Query: 143 AEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKA 202
            + LK FVSSG++TVN+DSSVQ++AEEAH ++ +DA+ AR +L+K QS+LSSA  E AKA
Sbjct: 81  GKTLKFFVSSGSVTVNEDSSVQVLAEEAHNIEDIDANEARQLLAKYQSQLSSAGDEKAKA 140

Query: 203 EAQIAVEVAEALVAAA 218
           +A IAVEVAEALV AA
Sbjct: 141 QAAIAVEVAEALVKAA 156


>gi|195553820|ref|XP_002076765.1| GD24697 [Drosophila simulans]
 gi|194202755|gb|EDX16331.1| GD24697 [Drosophila simulans]
          Length = 168

 Score =  160 bits (405), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 78/135 (57%), Positives = 104/135 (77%), Gaps = 2/135 (1%)

Query: 3   ARLVTS-ATRLAR-RGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTL 60
           ARL+ +   RLA+ R Y+D+M  T A+ NK FY    V+Q+DVPSFSG+FGIL  HVPTL
Sbjct: 7   ARLLAARGARLAQNRSYSDEMKLTFAAANKTFYDAAVVRQIDVPSFSGSFGILAKHVPTL 66

Query: 61  AILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKA 120
           A+LKPGV+ V E +G + K FVSSG++TVN+DSSVQ++AEEAH ++ +DA+ AR +L+K 
Sbjct: 67  AVLKPGVVQVVENDGKTLKFFVSSGSVTVNEDSSVQVLAEEAHNIEDIDANEARQLLAKY 126

Query: 121 QSELSSASSETAKAE 135
           QS+LSSA  E AKA+
Sbjct: 127 QSQLSSAGDEKAKAQ 141



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/76 (64%), Positives = 63/76 (82%)

Query: 143 AEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKA 202
            + LK FVSSG++TVN+DSSVQ++AEEAH ++ +DA+ AR +L+K QS+LSSA  E AKA
Sbjct: 81  GKTLKFFVSSGSVTVNEDSSVQVLAEEAHNIEDIDANEARQLLAKYQSQLSSAGDEKAKA 140

Query: 203 EAQIAVEVAEALVAAA 218
           +A IAVEVAEALV AA
Sbjct: 141 QAAIAVEVAEALVKAA 156


>gi|195481855|ref|XP_002101808.1| GE17838 [Drosophila yakuba]
 gi|194189332|gb|EDX02916.1| GE17838 [Drosophila yakuba]
          Length = 157

 Score =  160 bits (404), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 77/135 (57%), Positives = 104/135 (77%), Gaps = 2/135 (1%)

Query: 3   ARLVTS-ATRLAR-RGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTL 60
           ARL+ +   RLA+ R Y+D+M  T A+ NK FY    V+Q+DVPSFSG+FGIL  HVPTL
Sbjct: 7   ARLLAARGARLAQSRSYSDEMKLTFAAANKTFYDAAVVRQIDVPSFSGSFGILAKHVPTL 66

Query: 61  AILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKA 120
           A+LKPGV+ V E +G + K FVSSG++TVN+DSSVQ++AEEAH ++ +DA+ AR +L+K 
Sbjct: 67  AVLKPGVVQVVENDGKTLKFFVSSGSVTVNEDSSVQVLAEEAHNIEDIDANEARQLLAKY 126

Query: 121 QSELSSASSETAKAE 135
           QS+LSSA  + AKA+
Sbjct: 127 QSQLSSAGDDKAKAQ 141



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/82 (59%), Positives = 65/82 (79%)

Query: 137 QIAVEVAEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS 196
           Q+     + LK FVSSG++TVN+DSSVQ++AEEAH ++ +DA+ AR +L+K QS+LSSA 
Sbjct: 75  QVVENDGKTLKFFVSSGSVTVNEDSSVQVLAEEAHNIEDIDANEARQLLAKYQSQLSSAG 134

Query: 197 SETAKAEAQIAVEVAEALVAAA 218
            + AKA+A IAVEVAEALV AA
Sbjct: 135 DDKAKAQAAIAVEVAEALVKAA 156


>gi|18858089|ref|NP_572610.1| lethal (1) G0230, isoform A [Drosophila melanogaster]
 gi|442615755|ref|NP_001259397.1| lethal (1) G0230, isoform B [Drosophila melanogaster]
 gi|7291126|gb|AAF46561.1| lethal (1) G0230, isoform A [Drosophila melanogaster]
 gi|17945546|gb|AAL48825.1| RE24457p [Drosophila melanogaster]
 gi|220948188|gb|ACL86637.1| l(1)G0230-PA [synthetic construct]
 gi|220957490|gb|ACL91288.1| l(1)G0230-PA [synthetic construct]
 gi|440216604|gb|AGB95240.1| lethal (1) G0230, isoform B [Drosophila melanogaster]
          Length = 157

 Score =  160 bits (404), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 77/135 (57%), Positives = 104/135 (77%), Gaps = 2/135 (1%)

Query: 3   ARLVTS-ATRLAR-RGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTL 60
           ARL+ +   RLA+ R Y+D+M  T A+ NK FY    V+Q+DVPSFSG+FGIL  HVPTL
Sbjct: 7   ARLLAARGARLAQNRSYSDEMKLTFAAANKTFYDAAVVRQIDVPSFSGSFGILAKHVPTL 66

Query: 61  AILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKA 120
           A+LKPGV+ V E +G + K FVSSG++TVN+DSSVQ++AEEAH ++ +DA+ AR +L+K 
Sbjct: 67  AVLKPGVVQVVENDGKTLKFFVSSGSVTVNEDSSVQVLAEEAHNIEDIDANEARQLLAKY 126

Query: 121 QSELSSASSETAKAE 135
           QS+LSSA  + AKA+
Sbjct: 127 QSQLSSAGDDKAKAQ 141



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/82 (59%), Positives = 65/82 (79%)

Query: 137 QIAVEVAEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS 196
           Q+     + LK FVSSG++TVN+DSSVQ++AEEAH ++ +DA+ AR +L+K QS+LSSA 
Sbjct: 75  QVVENDGKTLKFFVSSGSVTVNEDSSVQVLAEEAHNIEDIDANEARQLLAKYQSQLSSAG 134

Query: 197 SETAKAEAQIAVEVAEALVAAA 218
            + AKA+A IAVEVAEALV AA
Sbjct: 135 DDKAKAQAAIAVEVAEALVKAA 156


>gi|289740631|gb|ADD19063.1| mitochondrial F1F0-ATP synthase subunit delta/ATP16 [Glossina
           morsitans morsitans]
          Length = 156

 Score =  159 bits (403), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 91/150 (60%), Positives = 111/150 (74%), Gaps = 8/150 (5%)

Query: 5   LVTSATRLARRG--------YADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNH 56
            V +A  LARRG        YAD+M  T A+ NK FY N +V+Q+DVPSFSG+FGIL  H
Sbjct: 2   FVKNARLLARRGTHLMQARGYADEMKLTFAAANKTFYDNADVRQIDVPSFSGSFGILAKH 61

Query: 57  VPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDV 116
           VPTLA+LKPG++ V E +G + K FVSSGTITVN+DSSVQ++AEEAH +  +D S AR +
Sbjct: 62  VPTLAVLKPGLVQVIENDGKTSKYFVSSGTITVNEDSSVQVLAEEAHEIKDIDVSEARQL 121

Query: 117 LSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           LSK QS +SSASS+ AKAEA IAVE  EAL
Sbjct: 122 LSKYQSAISSASSDAAKAEAAIAVECCEAL 151



 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 50/72 (69%), Positives = 58/72 (80%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSGTITVN+DSSVQ++AEEAH +  +D S AR +LSK QS +SSASS+ AKAEA I
Sbjct: 84  KYFVSSGTITVNEDSSVQVLAEEAHEIKDIDVSEARQLLSKYQSAISSASSDAAKAEAAI 143

Query: 207 AVEVAEALVAAA 218
           AVE  EALV AA
Sbjct: 144 AVECCEALVKAA 155


>gi|194890203|ref|XP_001977262.1| GG18349 [Drosophila erecta]
 gi|190648911|gb|EDV46189.1| GG18349 [Drosophila erecta]
          Length = 157

 Score =  159 bits (403), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 77/135 (57%), Positives = 104/135 (77%), Gaps = 2/135 (1%)

Query: 3   ARLVTS-ATRLAR-RGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTL 60
           ARL+ +   RLA+ R Y+D+M  T A+ NK FY    V+Q+DVPSFSG+FGIL  HVPTL
Sbjct: 7   ARLLAARGARLAQNRSYSDEMKLTFAAANKTFYDAAVVRQIDVPSFSGSFGILAKHVPTL 66

Query: 61  AILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKA 120
           A+LKPGV+ V E +G + K FVSSG++TVN+DSSVQ++AEEAH ++ +DA+ AR +L+K 
Sbjct: 67  AVLKPGVVQVVENDGKTLKFFVSSGSVTVNEDSSVQVLAEEAHNIEDIDANDARQLLAKY 126

Query: 121 QSELSSASSETAKAE 135
           QS+LSSA  + AKA+
Sbjct: 127 QSQLSSAGDDKAKAQ 141



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/82 (59%), Positives = 65/82 (79%)

Query: 137 QIAVEVAEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS 196
           Q+     + LK FVSSG++TVN+DSSVQ++AEEAH ++ +DA+ AR +L+K QS+LSSA 
Sbjct: 75  QVVENDGKTLKFFVSSGSVTVNEDSSVQVLAEEAHNIEDIDANDARQLLAKYQSQLSSAG 134

Query: 197 SETAKAEAQIAVEVAEALVAAA 218
            + AKA+A IAVEVAEALV AA
Sbjct: 135 DDKAKAQAAIAVEVAEALVKAA 156


>gi|195448643|ref|XP_002071749.1| GK24980 [Drosophila willistoni]
 gi|194167834|gb|EDW82735.1| GK24980 [Drosophila willistoni]
          Length = 160

 Score =  159 bits (402), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 80/136 (58%), Positives = 99/136 (72%), Gaps = 5/136 (3%)

Query: 3   ARLV-TSATRLA----RRGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHV 57
           ARL+ T   RLA    RR Y+D+M  T A+ NK FY    V+Q+DVPSFSGAFGIL  HV
Sbjct: 7   ARLLATRGARLAQNQSRRNYSDEMKLTFAAANKTFYDAAVVRQIDVPSFSGAFGILAKHV 66

Query: 58  PTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVL 117
           PTLA+LKPGV+ V E +G   K FVSSG++TVN+DSSVQ++AEEAH V  +D + AR +L
Sbjct: 67  PTLAVLKPGVVQVVENDGKLTKYFVSSGSVTVNEDSSVQVLAEEAHNVADIDVNEARQLL 126

Query: 118 SKAQSELSSASSETAK 133
           SK QS+LSSA  + AK
Sbjct: 127 SKYQSQLSSAGDDKAK 142



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/72 (68%), Positives = 59/72 (81%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN+DSSVQ++AEEAH V  +D + AR +LSK QS+LSSA  + AKAEA I
Sbjct: 88  KYFVSSGSVTVNEDSSVQVLAEEAHNVADIDVNEARQLLSKYQSQLSSAGDDKAKAEAAI 147

Query: 207 AVEVAEALVAAA 218
           AVEVAEALV AA
Sbjct: 148 AVEVAEALVKAA 159


>gi|291234865|ref|XP_002737363.1| PREDICTED: ATP synthase, H+ transporting, mitochondrial F1 complex,
           delta subunit-like [Saccoglossus kowalevskii]
          Length = 170

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 77/138 (55%), Positives = 104/138 (75%), Gaps = 6/138 (4%)

Query: 15  RGYAD------QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVI 68
           R YA+      QM FT A+ ++V+Y   +VKQVDVPS +G FGIL  HVP L++L+PG +
Sbjct: 27  RRYAEEALAPSQMSFTFATPSEVYYNEADVKQVDVPSTTGDFGILAQHVPVLSVLRPGCV 86

Query: 69  TVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS 128
            VY+ +G ++K FVSSGTITVNDDSSVQ++AEEA P+D +D  AA   LSKAQ +L S++
Sbjct: 87  VVYDNDGNTEKYFVSSGTITVNDDSSVQLLAEEATPIDQIDRQAAETGLSKAQQDLQSST 146

Query: 129 SETAKAEAQIAVEVAEAL 146
           ++ AKAEAQI++E+ EAL
Sbjct: 147 TDLAKAEAQISLELHEAL 164



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/71 (63%), Positives = 58/71 (81%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSGTITVNDDSSVQ++AEEA P+D +D  AA   LSKAQ +L S++++ AKAEAQI
Sbjct: 97  KYFVSSGTITVNDDSSVQLLAEEATPIDQIDRQAAETGLSKAQQDLQSSTTDLAKAEAQI 156

Query: 207 AVEVAEALVAA 217
           ++E+ EAL+ A
Sbjct: 157 SLELHEALLKA 167


>gi|196008285|ref|XP_002114008.1| expressed hypothetical protein [Trichoplax adhaerens]
 gi|190583027|gb|EDV23098.1| expressed hypothetical protein [Trichoplax adhaerens]
          Length = 164

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 78/142 (54%), Positives = 100/142 (70%), Gaps = 12/142 (8%)

Query: 1   MAARLVTSATRL-------ARRGYAD-----QMDFTLASGNKVFYTNQNVKQVDVPSFSG 48
           ++ARL     R          R YAD     Q+  T AS N+ FY+ QNVKQVDVPSFSG
Sbjct: 2   LSARLTRQLVRFNGRVVLQQSRNYADAAPASQLLLTFASPNQAFYSKQNVKQVDVPSFSG 61

Query: 49  AFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSL 108
            FGILP+HVPT+A++KPG++TVYE +G + K F SSG I+VN DS+VQI+AEEA P+D L
Sbjct: 62  NFGILPSHVPTIAVIKPGIVTVYEEDGTTSKYFASSGNISVNADSTVQILAEEACPLDQL 121

Query: 109 DASAARDVLSKAQSELSSASSE 130
           DA AAR+ L KA  +++SASS+
Sbjct: 122 DAQAAREGLEKANQQVTSASSD 143



 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/52 (61%), Positives = 41/52 (78%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSE 198
           K F SSG I+VN DS+VQI+AEEA P+D LDA AAR+ L KA  +++SASS+
Sbjct: 92  KYFASSGNISVNADSTVQILAEEACPLDQLDAQAAREGLEKANQQVTSASSD 143


>gi|242020519|ref|XP_002430700.1| ATP synthase delta chain, putative [Pediculus humanus corporis]
 gi|212515890|gb|EEB17962.1| ATP synthase delta chain, putative [Pediculus humanus corporis]
          Length = 164

 Score =  156 bits (394), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 71/121 (58%), Positives = 99/121 (81%), Gaps = 4/121 (3%)

Query: 14  RRGYAD----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVIT 69
           +RGYA+    +M  TLA+ N+VFY  ++VKQ+DVP+F+G FGILP HVP L +L PGV+T
Sbjct: 24  KRGYAEAAAKEMPLTLAAANQVFYDAEDVKQIDVPTFNGVFGILPKHVPILGVLSPGVVT 83

Query: 70  VYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASS 129
           V+  +G S+KIFVSSGT+ VN+DSSVQ++AEEAH ++ +D++AA++ LSKAQSEL+SAS 
Sbjct: 84  VFLKDGSSKKIFVSSGTLCVNEDSSVQVLAEEAHYLEDIDSNAAKESLSKAQSELASASP 143

Query: 130 E 130
           +
Sbjct: 144 D 144



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/52 (65%), Positives = 47/52 (90%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSE 198
           KIFVSSGT+ VN+DSSVQ++AEEAH ++ +D++AA++ LSKAQSEL+SAS +
Sbjct: 93  KIFVSSGTLCVNEDSSVQVLAEEAHYLEDIDSNAAKESLSKAQSELASASPD 144


>gi|410921176|ref|XP_003974059.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like isoform 1
           [Takifugu rubripes]
 gi|410921178|ref|XP_003974060.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like isoform 2
           [Takifugu rubripes]
          Length = 160

 Score =  155 bits (393), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 81/154 (52%), Positives = 108/154 (70%), Gaps = 8/154 (5%)

Query: 1   MAARLVTSATRLAR--RGYAD------QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGI 52
           +AAR +  A  + R  R YA+      QM FT AS  +VF+   +VKQVDVP+ +G FGI
Sbjct: 2   LAARFLRRALPVLRQTRSYAEAATGAPQMSFTFASPTQVFFQEASVKQVDVPTLTGTFGI 61

Query: 53  LPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASA 112
           LP HVPTL +L+PGV+TV+  +G + K FVSSG++TVN DSSVQ++AEEA  +D LD +A
Sbjct: 62  LPAHVPTLQVLRPGVVTVFSDDGSAVKYFVSSGSVTVNADSSVQLLAEEAVSLDQLDVAA 121

Query: 113 ARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           A+  L KAQS L+ AS E A+AE QI++E  EA+
Sbjct: 122 AKANLEKAQSALAGASDEAARAEVQISIEANEAI 155


>gi|147904284|ref|NP_001087284.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit [Xenopus laevis]
 gi|51593674|gb|AAH78510.1| MGC85306 protein [Xenopus laevis]
          Length = 162

 Score =  155 bits (393), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 75/126 (59%), Positives = 96/126 (76%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           M FT AS  +VFY+  +VKQVDVP+ +G FGILP HVPTL +L+PG++TV+  +GV+ K 
Sbjct: 32  MSFTFASSTQVFYSGASVKQVDVPTLTGMFGILPAHVPTLQVLRPGLVTVFSDDGVATKY 91

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           FVSSG++TVN DSSVQ++AEEA  +D LD S A+  L KAQ+EL SA  E AKAEA I V
Sbjct: 92  FVSSGSVTVNADSSVQLLAEEAVTLDMLDLSTAKSNLEKAQAELQSAGDEAAKAEALINV 151

Query: 141 EVAEAL 146
           E +EA+
Sbjct: 152 EASEAI 157


>gi|442751325|gb|JAA67822.1| Putative atp synthase h+ transporting mitochondrial f1 complex
           delta subunit precursor [Ixodes ricinus]
          Length = 166

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 85/152 (55%), Positives = 109/152 (71%), Gaps = 7/152 (4%)

Query: 2   AARLVTSATRL------ARRGYADQ-MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILP 54
           A R V   +R         R YAD  M  T AS  + F+   +VKQVDVPS+SG FGILP
Sbjct: 10  ACRFVVPKSRFLASQSVQARTYADGGMPLTFASPAETFFDKVDVKQVDVPSYSGNFGILP 69

Query: 55  NHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAAR 114
           NHVP LA++KPGV+TV+  EG +Q+ FVSSGTIT+N+DSSVQ++AE A PVD LDA A R
Sbjct: 70  NHVPALAVIKPGVVTVFTNEGDAQRFFVSSGTITINEDSSVQVLAEAAVPVDRLDAQACR 129

Query: 115 DVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           + L+KAQ  +++A+++ A+AEAQI VEV EAL
Sbjct: 130 EGLAKAQQAVTAAATDEARAEAQIQVEVHEAL 161



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 45/75 (60%), Positives = 60/75 (80%)

Query: 143 AEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKA 202
            +A + FVSSGTIT+N+DSSVQ++AE A PVD LDA A R+ L+KAQ  +++A+++ A+A
Sbjct: 90  GDAQRFFVSSGTITINEDSSVQVLAEAAVPVDRLDAQACREGLAKAQQAVTAAATDEARA 149

Query: 203 EAQIAVEVAEALVAA 217
           EAQI VEV EALV A
Sbjct: 150 EAQIQVEVHEALVKA 164


>gi|195045498|ref|XP_001991984.1| GH24459 [Drosophila grimshawi]
 gi|193892825|gb|EDV91691.1| GH24459 [Drosophila grimshawi]
          Length = 157

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 78/133 (58%), Positives = 99/133 (74%), Gaps = 2/133 (1%)

Query: 3   ARLVTS-ATRLA-RRGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTL 60
           ARL+ +  +RLA +R Y+D M  T A+ N+ FY    V+Q+DVPSFSG+FGIL  HVPTL
Sbjct: 7   ARLLAARGSRLAQKRSYSDDMKLTFAAANQTFYDAAVVRQIDVPSFSGSFGILAKHVPTL 66

Query: 61  AILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKA 120
           A+LKPGV+ V + EG   K FVSSG++TVN+DSSVQ++AEEAH V  +D S AR +LSK 
Sbjct: 67  AVLKPGVVQVIDNEGKLTKYFVSSGSVTVNEDSSVQVLAEEAHNVADIDVSEARQLLSKY 126

Query: 121 QSELSSASSETAK 133
           QS LSSA S+ AK
Sbjct: 127 QSALSSAGSDKAK 139



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/72 (70%), Positives = 59/72 (81%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN+DSSVQ++AEEAH V  +D S AR +LSK QS LSSA S+ AKAEA I
Sbjct: 85  KYFVSSGSVTVNEDSSVQVLAEEAHNVADIDVSEARQLLSKYQSALSSAGSDKAKAEAAI 144

Query: 207 AVEVAEALVAAA 218
           AVEVAEALV AA
Sbjct: 145 AVEVAEALVKAA 156


>gi|195393686|ref|XP_002055484.1| GJ19398 [Drosophila virilis]
 gi|194149994|gb|EDW65685.1| GJ19398 [Drosophila virilis]
          Length = 157

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 77/133 (57%), Positives = 98/133 (73%), Gaps = 2/133 (1%)

Query: 3   ARLVT-SATRLA-RRGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTL 60
           ARLV     RL+ +R Y+D M  T A+ NK FY    V+Q+DVPSFSG+FGIL  HVPTL
Sbjct: 7   ARLVALRGARLSQKRSYSDDMKLTFAAANKTFYDAAVVRQIDVPSFSGSFGILAKHVPTL 66

Query: 61  AILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKA 120
           A+LKPGV+ V + +G   K FVSSG++TVN+DSSVQ++AEEAH ++ +D S AR +LSK 
Sbjct: 67  AVLKPGVVQVTDNDGKLTKYFVSSGSVTVNEDSSVQVLAEEAHNIEDIDVSEARQLLSKY 126

Query: 121 QSELSSASSETAK 133
           QS LSSA S+ AK
Sbjct: 127 QSALSSAGSDKAK 139



 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/72 (69%), Positives = 60/72 (83%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN+DSSVQ++AEEAH ++ +D S AR +LSK QS LSSA S+ AKAEA I
Sbjct: 85  KYFVSSGSVTVNEDSSVQVLAEEAHNIEDIDVSEARQLLSKYQSALSSAGSDKAKAEAAI 144

Query: 207 AVEVAEALVAAA 218
           AVEVAEALV AA
Sbjct: 145 AVEVAEALVKAA 156


>gi|195134855|ref|XP_002011852.1| GI14351 [Drosophila mojavensis]
 gi|193909106|gb|EDW07973.1| GI14351 [Drosophila mojavensis]
          Length = 157

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 78/135 (57%), Positives = 99/135 (73%), Gaps = 6/135 (4%)

Query: 3   ARLVTSATRLAR----RGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVP 58
           ARL+  A R AR    R Y+D M  T A+ NK F+    V+Q+DVPSFSG+FGIL  HVP
Sbjct: 7   ARLL--AMRGARLGQNRSYSDDMKLTFAAANKTFFDAAVVRQIDVPSFSGSFGILAKHVP 64

Query: 59  TLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLS 118
           TLA+LKPGV+ V + EG   K FVSSG++TVN+DSSVQ++AEEAH ++ +D S AR +LS
Sbjct: 65  TLAVLKPGVVQVTDNEGKVTKYFVSSGSVTVNEDSSVQVLAEEAHNIEDIDVSEARQLLS 124

Query: 119 KAQSELSSASSETAK 133
           K QSELSSA ++ AK
Sbjct: 125 KYQSELSSAGNDKAK 139



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/72 (69%), Positives = 61/72 (84%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN+DSSVQ++AEEAH ++ +D S AR +LSK QSELSSA ++ AKAEA I
Sbjct: 85  KYFVSSGSVTVNEDSSVQVLAEEAHNIEDIDVSEARQLLSKYQSELSSAGNDKAKAEAAI 144

Query: 207 AVEVAEALVAAA 218
           AVEVAEALV AA
Sbjct: 145 AVEVAEALVKAA 156


>gi|67083949|gb|AAY66909.1| ATP synthase H+ transporting, mitochondrial F1 complex, delta
           subunit precursor [Ixodes scapularis]
          Length = 166

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 85/152 (55%), Positives = 110/152 (72%), Gaps = 7/152 (4%)

Query: 2   AARLVTSATRL------ARRGYADQ-MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILP 54
           A R V   +RL        R YAD  M  T AS  + F+   +VKQVDVPS+SG FGILP
Sbjct: 10  ACRFVVPKSRLLASQSVQARTYADGGMPLTFASPAETFFDKVDVKQVDVPSYSGNFGILP 69

Query: 55  NHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAAR 114
           +HVP LA++KPGV+TV+  EG +Q+ FVSSGTIT+N+DSSVQ++AE A PVD LDA A R
Sbjct: 70  HHVPALAVIKPGVVTVFTNEGDAQRFFVSSGTITINEDSSVQVLAEAAVPVDRLDAQACR 129

Query: 115 DVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           + L+KAQ  +++A+++ A+AEAQI VEV EAL
Sbjct: 130 EGLAKAQQAVTAAATDEARAEAQIEVEVHEAL 161



 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 45/75 (60%), Positives = 60/75 (80%)

Query: 143 AEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKA 202
            +A + FVSSGTIT+N+DSSVQ++AE A PVD LDA A R+ L+KAQ  +++A+++ A+A
Sbjct: 90  GDAQRFFVSSGTITINEDSSVQVLAEAAVPVDRLDAQACREGLAKAQQAVTAAATDEARA 149

Query: 203 EAQIAVEVAEALVAA 217
           EAQI VEV EALV A
Sbjct: 150 EAQIEVEVHEALVKA 164


>gi|195163511|ref|XP_002022593.1| GL12886 [Drosophila persimilis]
 gi|198476962|ref|XP_002136827.1| GA22488 [Drosophila pseudoobscura pseudoobscura]
 gi|194104585|gb|EDW26628.1| GL12886 [Drosophila persimilis]
 gi|198145152|gb|EDY71856.1| GA22488 [Drosophila pseudoobscura pseudoobscura]
          Length = 157

 Score =  154 bits (388), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 74/130 (56%), Positives = 96/130 (73%), Gaps = 1/130 (0%)

Query: 5   LVTSATRLAR-RGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAIL 63
           L     RLA+ R Y+D+M  T A+ N+ FY    V+Q+DVPSFSGAFGIL  HVPTLA+L
Sbjct: 10  LAARGARLAQSRAYSDEMKLTFAAANQTFYDAAVVRQIDVPSFSGAFGILAKHVPTLAVL 69

Query: 64  KPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSE 123
           KPGV+ V + +G + K FVSSG++TVN+DSSVQ++AEEAH V  +D + AR +LSK QS+
Sbjct: 70  KPGVVQVVDNDGKTTKYFVSSGSVTVNEDSSVQVLAEEAHNVADIDVAEARQLLSKYQSQ 129

Query: 124 LSSASSETAK 133
           LSSA  + AK
Sbjct: 130 LSSAGDDKAK 139



 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/72 (68%), Positives = 59/72 (81%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN+DSSVQ++AEEAH V  +D + AR +LSK QS+LSSA  + AKAEA I
Sbjct: 85  KYFVSSGSVTVNEDSSVQVLAEEAHNVADIDVAEARQLLSKYQSQLSSAGDDKAKAEAAI 144

Query: 207 AVEVAEALVAAA 218
           AVEVAEALV AA
Sbjct: 145 AVEVAEALVKAA 156


>gi|334326702|ref|XP_001374107.2| PREDICTED: ATP synthase subunit delta, mitochondrial-like
           [Monodelphis domestica]
          Length = 173

 Score =  154 bits (388), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 77/127 (60%), Positives = 95/127 (74%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           QM FT AS  +V++   NVKQVDVP+ SGAFGIL  HVPTL +LKPG++TV+  +G + K
Sbjct: 42  QMSFTFASPTQVYFNEANVKQVDVPTQSGAFGILAAHVPTLQVLKPGIVTVHAEDGTTTK 101

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 139
            FVSSG+ITVN DSSVQ++AEEA  +D LD  AA+  L KA SELS AS E A+AEAQI 
Sbjct: 102 YFVSSGSITVNADSSVQLLAEEAVSLDMLDLGAAKSNLEKAHSELSGASDEAARAEAQIR 161

Query: 140 VEVAEAL 146
           +E  EA+
Sbjct: 162 IEANEAI 168



 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/71 (63%), Positives = 53/71 (74%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG+ITVN DSSVQ++AEEA  +D LD  AA+  L KA SELS AS E A+AEAQI
Sbjct: 101 KYFVSSGSITVNADSSVQLLAEEAVSLDMLDLGAAKSNLEKAHSELSGASDEAARAEAQI 160

Query: 207 AVEVAEALVAA 217
            +E  EA+V A
Sbjct: 161 RIEANEAIVKA 171


>gi|166851828|ref|NP_079589.2| ATP synthase subunit delta, mitochondrial precursor [Mus musculus]
 gi|78099820|sp|Q9D3D9.1|ATPD_MOUSE RecName: Full=ATP synthase subunit delta, mitochondrial; AltName:
           Full=F-ATPase delta subunit; Flags: Precursor
 gi|12857538|dbj|BAB31035.1| unnamed protein product [Mus musculus]
 gi|14198434|gb|AAH08273.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit [Mus musculus]
 gi|71059683|emb|CAJ18385.1| Atp5d [Mus musculus]
 gi|74139156|dbj|BAE38468.1| unnamed protein product [Mus musculus]
 gi|74185364|dbj|BAE30157.1| unnamed protein product [Mus musculus]
 gi|74199270|dbj|BAE33165.1| unnamed protein product [Mus musculus]
 gi|148699645|gb|EDL31592.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit, isoform CRA_c [Mus musculus]
          Length = 168

 Score =  153 bits (387), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 75/127 (59%), Positives = 96/127 (75%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           QM FT AS  +VF+ + NVKQVDVP+ +GAFGIL +HVPTL +L+PG++ V+  +G + K
Sbjct: 37  QMSFTFASPTQVFFDSANVKQVDVPTLTGAFGILASHVPTLQVLRPGLVVVHTEDGTTTK 96

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 139
            FVSSG++TVN DSSVQ++AEEA  +D LD  AAR  L KAQSELS A+ E A+AE QI 
Sbjct: 97  YFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAARANLEKAQSELSGAADEAARAEIQIR 156

Query: 140 VEVAEAL 146
           +E  EAL
Sbjct: 157 IEANEAL 163



 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/71 (63%), Positives = 53/71 (74%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN DSSVQ++AEEA  +D LD  AAR  L KAQSELS A+ E A+AE QI
Sbjct: 96  KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAARANLEKAQSELSGAADEAARAEIQI 155

Query: 207 AVEVAEALVAA 217
            +E  EALV A
Sbjct: 156 RIEANEALVKA 166


>gi|348550383|ref|XP_003461011.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like [Cavia
           porcellus]
          Length = 168

 Score =  153 bits (387), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 74/127 (58%), Positives = 93/127 (73%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           QM FT AS  +VF+   NV+QVDVP+ +GAFGIL +HVPTL +L+PG++ VY  +G + K
Sbjct: 37  QMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILASHVPTLQVLRPGLVVVYAEDGTTTK 96

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 139
            FVSSG++TVN DSSVQ++AEEA  +D LD   AR  L KAQSELS  S E A+AE QI 
Sbjct: 97  YFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGMARANLEKAQSELSGVSDEAARAEIQIR 156

Query: 140 VEVAEAL 146
           +E  EAL
Sbjct: 157 IEANEAL 163



 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 44/71 (61%), Positives = 51/71 (71%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN DSSVQ++AEEA  +D LD   AR  L KAQSELS  S E A+AE QI
Sbjct: 96  KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGMARANLEKAQSELSGVSDEAARAEIQI 155

Query: 207 AVEVAEALVAA 217
            +E  EALV A
Sbjct: 156 RIEANEALVKA 166


>gi|225714418|gb|ACO13055.1| ATP synthase subunit delta, mitochondrial precursor [Lepeophtheirus
           salmonis]
 gi|290561951|gb|ADD38373.1| ATP synthase subunit delta, mitochondrial [Lepeophtheirus salmonis]
          Length = 156

 Score =  153 bits (387), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 83/146 (56%), Positives = 108/146 (73%), Gaps = 1/146 (0%)

Query: 1   MAARLVTSATRLARRGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTL 60
           M +R +     + RRGYA+ M  T A+ N V Y    VKQVD+PSFSG+FGILP+HVP+L
Sbjct: 7   MLSRRLVQQAMMQRRGYAE-MSLTFAAPNGVHYNETIVKQVDIPSFSGSFGILPDHVPSL 65

Query: 61  AILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKA 120
           A+LKPGVI+V+E  G   K FVSSG++T+N DS+VQI+AEEAHP+  LD +AA+  LS A
Sbjct: 66  AVLKPGVISVFEETGDVAKFFVSSGSVTINADSTVQILAEEAHPLADLDPAAAKQALSDA 125

Query: 121 QSELSSASSETAKAEAQIAVEVAEAL 146
           Q+ L+SA+S+  KAEA+I VE AE L
Sbjct: 126 QASLASAASDAEKAEAEIEVETAEEL 151



 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/77 (55%), Positives = 58/77 (75%)

Query: 141 EVAEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETA 200
           E  +  K FVSSG++T+N DS+VQI+AEEAHP+  LD +AA+  LS AQ+ L+SA+S+  
Sbjct: 78  ETGDVAKFFVSSGSVTINADSTVQILAEEAHPLADLDPAAAKQALSDAQASLASAASDAE 137

Query: 201 KAEAQIAVEVAEALVAA 217
           KAEA+I VE AE L+ A
Sbjct: 138 KAEAEIEVETAEELLKA 154


>gi|194769360|ref|XP_001966772.1| GF19203 [Drosophila ananassae]
 gi|190618293|gb|EDV33817.1| GF19203 [Drosophila ananassae]
          Length = 157

 Score =  153 bits (386), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 76/129 (58%), Positives = 97/129 (75%), Gaps = 6/129 (4%)

Query: 3   ARLVTSATRLAR----RGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVP 58
           ARL+  ATR AR    R Y+D+M  T A+ NK FY    V+Q+DVPSFSG+FGIL  HVP
Sbjct: 7   ARLL--ATRGARMVQSRSYSDEMKLTFAAANKTFYDAAVVRQIDVPSFSGSFGILAKHVP 64

Query: 59  TLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLS 118
           TLA+LKPGV+ V E +G   K F+SSG++TVNDDSSVQ++AEEAH V+ +D + AR +L+
Sbjct: 65  TLAVLKPGVVQVVENDGKLIKFFISSGSVTVNDDSSVQVLAEEAHNVEDIDINEARQLLT 124

Query: 119 KAQSELSSA 127
           K QS+LSSA
Sbjct: 125 KYQSQLSSA 133



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/76 (64%), Positives = 62/76 (81%)

Query: 143 AEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKA 202
            + +K F+SSG++TVNDDSSVQ++AEEAH V+ +D + AR +L+K QS+LSSA  E AKA
Sbjct: 81  GKLIKFFISSGSVTVNDDSSVQVLAEEAHNVEDIDINEARQLLTKYQSQLSSAGDEKAKA 140

Query: 203 EAQIAVEVAEALVAAA 218
           EA IAVEVAEALV AA
Sbjct: 141 EAAIAVEVAEALVKAA 156


>gi|12832230|dbj|BAB22016.1| unnamed protein product [Mus musculus]
          Length = 168

 Score =  153 bits (386), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 75/127 (59%), Positives = 96/127 (75%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           QM FT AS  +VF+ + NVKQVDVP+ +GAFGIL +HVPTL +L+PG++ V+  +G + K
Sbjct: 37  QMSFTFASPTQVFFDSANVKQVDVPTLTGAFGILASHVPTLQVLRPGLVGVHTEDGTTTK 96

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 139
            FVSSG++TVN DSSVQ++AEEA  +D LD  AAR  L KAQSELS A+ E A+AE QI 
Sbjct: 97  YFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAARANLEKAQSELSGAADEAARAEIQIR 156

Query: 140 VEVAEAL 146
           +E  EAL
Sbjct: 157 IEANEAL 163



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/71 (63%), Positives = 53/71 (74%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN DSSVQ++AEEA  +D LD  AAR  L KAQSELS A+ E A+AE QI
Sbjct: 96  KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAARANLEKAQSELSGAADEAARAEIQI 155

Query: 207 AVEVAEALVAA 217
            +E  EALV A
Sbjct: 156 RIEANEALVKA 166


>gi|62858087|ref|NP_001016516.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit [Xenopus (Silurana) tropicalis]
 gi|140833116|gb|AAI35475.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit [Xenopus (Silurana) tropicalis]
          Length = 162

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 74/126 (58%), Positives = 95/126 (75%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           M FT AS  +VFY+  +VKQVDVP+ +G FGILP HVPTL +L+PG++TV+  +G + K 
Sbjct: 32  MSFTFASPTQVFYSGASVKQVDVPTLTGMFGILPAHVPTLQVLRPGIVTVFSDDGGATKY 91

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           FVSSG++TVN DSSVQ++AEEA  +D LD S A+  L KAQ+EL SA  E AKAEA I V
Sbjct: 92  FVSSGSVTVNADSSVQLLAEEAVTLDMLDLSTAKSNLEKAQAELQSAGDEAAKAEALINV 151

Query: 141 EVAEAL 146
           E +EA+
Sbjct: 152 EASEAI 157



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/73 (61%), Positives = 54/73 (73%)

Query: 145 ALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEA 204
           A K FVSSG++TVN DSSVQ++AEEA  +D LD S A+  L KAQ+EL SA  E AKAEA
Sbjct: 88  ATKYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLSTAKSNLEKAQAELQSAGDEAAKAEA 147

Query: 205 QIAVEVAEALVAA 217
            I VE +EA+V A
Sbjct: 148 LINVEASEAIVKA 160


>gi|20806153|ref|NP_620806.1| ATP synthase subunit delta, mitochondrial precursor [Rattus
           norvegicus]
 gi|1352036|sp|P35434.2|ATPD_RAT RecName: Full=ATP synthase subunit delta, mitochondrial; AltName:
           Full=F-ATPase delta subunit; Flags: Precursor
 gi|457929|gb|AAC28872.1| delta subunit of F1F0 ATPase [Rattus norvegicus]
          Length = 168

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 73/127 (57%), Positives = 94/127 (74%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           QM FT AS  +VF+   NV+QVDVP+ +GAFGIL +HVPTL +L+PG++ V+  +G + K
Sbjct: 37  QMSFTFASPTQVFFDGANVRQVDVPTLTGAFGILASHVPTLQVLRPGLVMVHAEDGTTTK 96

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 139
            FVSSG++TVN DSSVQ++AEE   +D LD  AAR  L KAQSELS A+ E A+AE QI 
Sbjct: 97  YFVSSGSVTVNADSSVQLLAEEVVTLDMLDLGAARANLEKAQSELSGAADEAARAEIQIR 156

Query: 140 VEVAEAL 146
           +E  EAL
Sbjct: 157 IEANEAL 163



 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 44/71 (61%), Positives = 52/71 (73%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN DSSVQ++AEE   +D LD  AAR  L KAQSELS A+ E A+AE QI
Sbjct: 96  KYFVSSGSVTVNADSSVQLLAEEVVTLDMLDLGAARANLEKAQSELSGAADEAARAEIQI 155

Query: 207 AVEVAEALVAA 217
            +E  EALV A
Sbjct: 156 RIEANEALVKA 166


>gi|149034587|gb|EDL89324.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit, isoform CRA_b [Rattus norvegicus]
          Length = 168

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 73/127 (57%), Positives = 94/127 (74%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           QM FT AS  +VF+   NV+QVDVP+ +GAFGIL +HVPTL +L+PG++ V+  +G + K
Sbjct: 37  QMSFTFASPTQVFFDGANVRQVDVPTLTGAFGILASHVPTLQVLRPGLVVVHAEDGTTTK 96

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 139
            FVSSG++TVN DSSVQ++AEE   +D LD  AAR  L KAQSELS A+ E A+AE QI 
Sbjct: 97  YFVSSGSVTVNADSSVQLLAEEVVTLDMLDLGAARANLEKAQSELSGAADEAARAEIQIR 156

Query: 140 VEVAEAL 146
           +E  EAL
Sbjct: 157 IEANEAL 163



 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 44/71 (61%), Positives = 52/71 (73%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN DSSVQ++AEE   +D LD  AAR  L KAQSELS A+ E A+AE QI
Sbjct: 96  KYFVSSGSVTVNADSSVQLLAEEVVTLDMLDLGAARANLEKAQSELSGAADEAARAEIQI 155

Query: 207 AVEVAEALVAA 217
            +E  EALV A
Sbjct: 156 RIEANEALVKA 166


>gi|256086218|ref|XP_002579299.1| ATP synthase delta chain mitochondrial [Schistosoma mansoni]
 gi|238664726|emb|CAZ35538.1| ATP synthase delta chain, mitochondrial,putative [Schistosoma
           mansoni]
          Length = 161

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 70/127 (55%), Positives = 93/127 (73%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           ++  T AS  + FY N  VKQVDVP+ +G FG+LP HVPT+  LKPG++ V E +G  +K
Sbjct: 27  ELKLTFASSGQAFYNNVAVKQVDVPTLNGRFGVLPEHVPTVGCLKPGIVAVTENDGNVKK 86

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 139
            FVSSG +TVN DSS+Q++AEEA  +D LD +A +D +S+AQSELSSA++E  K EAQIA
Sbjct: 87  YFVSSGIVTVNSDSSIQVLAEEAASLDQLDLNAVKDGMSRAQSELSSATTELGKTEAQIA 146

Query: 140 VEVAEAL 146
           VE  E +
Sbjct: 147 VEAFEEM 153



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/68 (60%), Positives = 53/68 (77%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG +TVN DSS+Q++AEEA  +D LD +A +D +S+AQSELSSA++E  K EAQI
Sbjct: 86  KYFVSSGIVTVNSDSSIQVLAEEAASLDQLDLNAVKDGMSRAQSELSSATTELGKTEAQI 145

Query: 207 AVEVAEAL 214
           AVE  E +
Sbjct: 146 AVEAFEEM 153


>gi|12847456|dbj|BAB27577.1| unnamed protein product [Mus musculus]
          Length = 168

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 74/127 (58%), Positives = 95/127 (74%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           QM FT AS  +VF+ + NVKQVDVP+ +GAFGIL +HVPTL +L+PG++ V+  +G + K
Sbjct: 37  QMSFTFASPTQVFFDSANVKQVDVPTLTGAFGILASHVPTLQVLRPGLVVVHTEDGTTTK 96

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 139
            FVSS ++TVN DSSVQ++AEEA  +D LD  AAR  L KAQSELS A+ E A+AE QI 
Sbjct: 97  YFVSSSSVTVNADSSVQLLAEEAVTLDMLDLGAARANLEKAQSELSGAADEAARAEIQIR 156

Query: 140 VEVAEAL 146
           +E  EAL
Sbjct: 157 IEANEAL 163



 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/71 (61%), Positives = 52/71 (73%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSS ++TVN DSSVQ++AEEA  +D LD  AAR  L KAQSELS A+ E A+AE QI
Sbjct: 96  KYFVSSSSVTVNADSSVQLLAEEAVTLDMLDLGAARANLEKAQSELSGAADEAARAEIQI 155

Query: 207 AVEVAEALVAA 217
            +E  EALV A
Sbjct: 156 RIEANEALVKA 166


>gi|351699546|gb|EHB02465.1| ATP synthase subunit delta, mitochondrial [Heterocephalus glaber]
          Length = 168

 Score =  150 bits (379), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 72/127 (56%), Positives = 94/127 (74%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           QM FT AS  +VF+   NV+QVDVP+ +GAFGIL +HVPTL +L+PG++ V+  +G + K
Sbjct: 37  QMSFTFASPTQVFFNRANVRQVDVPTLTGAFGILASHVPTLQVLRPGLVVVHAEDGTTTK 96

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 139
            FVSSG++TVN DSSVQ++AEEA  +D LD   AR  L KAQSELS A+ E ++AE QI 
Sbjct: 97  YFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGTARANLEKAQSELSGAADEASRAEIQIR 156

Query: 140 VEVAEAL 146
           +E  EAL
Sbjct: 157 IEANEAL 163



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/71 (60%), Positives = 52/71 (73%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN DSSVQ++AEEA  +D LD   AR  L KAQSELS A+ E ++AE QI
Sbjct: 96  KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGTARANLEKAQSELSGAADEASRAEIQI 155

Query: 207 AVEVAEALVAA 217
            +E  EALV A
Sbjct: 156 RIEANEALVKA 166


>gi|354480846|ref|XP_003502614.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like
           [Cricetulus griseus]
 gi|344243386|gb|EGV99489.1| ATP synthase subunit delta, mitochondrial [Cricetulus griseus]
          Length = 167

 Score =  149 bits (377), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 72/127 (56%), Positives = 94/127 (74%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           QM FT AS  +VF+   NV+QVDVP+ +GAFGIL +HVPTL +L+PG++ V+  +G + K
Sbjct: 36  QMSFTFASPTQVFFDGVNVRQVDVPTLTGAFGILASHVPTLQVLRPGLVVVHAEDGTTTK 95

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 139
            FVSSG++TVN DSSVQ++AEEA  +D LD  AAR  L KA+SELS  + E A+AE QI 
Sbjct: 96  YFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAARANLEKARSELSGTTDEAARAEIQIC 155

Query: 140 VEVAEAL 146
           +E  EAL
Sbjct: 156 IEANEAL 162



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/71 (60%), Positives = 52/71 (73%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN DSSVQ++AEEA  +D LD  AAR  L KA+SELS  + E A+AE QI
Sbjct: 95  KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAARANLEKARSELSGTTDEAARAEIQI 154

Query: 207 AVEVAEALVAA 217
            +E  EALV A
Sbjct: 155 CIEANEALVKA 165


>gi|417396463|gb|JAA45265.1| Putative mitochondrial f1f0-atp synthase subunit delta/atp16
           [Desmodus rotundus]
          Length = 168

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 73/127 (57%), Positives = 95/127 (74%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           QM FT AS  +VF+   NV+QVDVP+ +GAFGIL  HVPTL +L+PG++ V+  +G + K
Sbjct: 37  QMSFTFASPTQVFFNGANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTTK 96

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 139
            FVSSG++TVN DSSVQ++AEEA  +D LD +AA+  L KAQSELS A+ E A+AE QI 
Sbjct: 97  YFVSSGSVTVNADSSVQLLAEEAVTLDMLDLAAAKANLEKAQSELSGAADEAARAEIQIR 156

Query: 140 VEVAEAL 146
           +E  EAL
Sbjct: 157 IEANEAL 163



 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 44/71 (61%), Positives = 54/71 (76%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN DSSVQ++AEEA  +D LD +AA+  L KAQSELS A+ E A+AE QI
Sbjct: 96  KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLAAAKANLEKAQSELSGAADEAARAEIQI 155

Query: 207 AVEVAEALVAA 217
            +E  EALV A
Sbjct: 156 RIEANEALVKA 166


>gi|301776318|ref|XP_002923558.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like
           [Ailuropoda melanoleuca]
          Length = 168

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 72/127 (56%), Positives = 94/127 (74%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           QM FT AS  +VF+   NV+QVDVP+ +GAFGIL  HVPTL +L+PG++ V+  +G + K
Sbjct: 37  QMSFTFASPTQVFFNGANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTSK 96

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 139
            FVSSG++TVN DSSVQ++AEEA  +D LD  AA+  L KAQSELS A+ E ++AE QI 
Sbjct: 97  YFVSSGSVTVNADSSVQLLAEEAVTLDMLDVGAAKVNLEKAQSELSGAADEASRAEIQIR 156

Query: 140 VEVAEAL 146
           +E  EAL
Sbjct: 157 IEANEAL 163



 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/71 (60%), Positives = 53/71 (74%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN DSSVQ++AEEA  +D LD  AA+  L KAQSELS A+ E ++AE QI
Sbjct: 96  KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDVGAAKVNLEKAQSELSGAADEASRAEIQI 155

Query: 207 AVEVAEALVAA 217
            +E  EALV A
Sbjct: 156 RIEANEALVKA 166


>gi|410949901|ref|XP_003981655.1| PREDICTED: ATP synthase subunit delta, mitochondrial [Felis catus]
          Length = 168

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 72/127 (56%), Positives = 94/127 (74%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           QM FT AS  +VF+   NV+QVDVP+ +GAFGIL  HVPTL +L+PG++ V+  +G + K
Sbjct: 37  QMSFTFASPTQVFFNGANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTSK 96

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 139
            FVSSG++TVN DSSVQ++AEEA  +D LD  AA+  L KAQSELS A+ E ++AE QI 
Sbjct: 97  YFVSSGSVTVNADSSVQLLAEEAVTLDMLDVGAAKVNLEKAQSELSGAADEASRAEIQIR 156

Query: 140 VEVAEAL 146
           +E  EAL
Sbjct: 157 IEANEAL 163



 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/71 (60%), Positives = 53/71 (74%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN DSSVQ++AEEA  +D LD  AA+  L KAQSELS A+ E ++AE QI
Sbjct: 96  KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDVGAAKVNLEKAQSELSGAADEASRAEIQI 155

Query: 207 AVEVAEALVAA 217
            +E  EALV A
Sbjct: 156 RIEANEALVKA 166


>gi|72068590|ref|XP_801793.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like isoform 2
           [Strongylocentrotus purpuratus]
          Length = 173

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 78/140 (55%), Positives = 103/140 (73%), Gaps = 8/140 (5%)

Query: 15  RGYAD--------QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPG 66
           R YA+        QM F+     K+FY+N +VKQVDVPS +G+FGIL  HVP+LA++KPG
Sbjct: 28  RNYAEDAKASAPTQMSFSFGYPGKMFYSNASVKQVDVPSGTGSFGILAQHVPSLAVMKPG 87

Query: 67  VITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSS 126
           +I V E +G   K FVSSG ITVNDDSSVQI+AE A PV+ LD  A ++ ++KAQ EL++
Sbjct: 88  MIFVTEDDGSINKYFVSSGMITVNDDSSVQILAEMAAPVEDLDPQAIKEGMTKAQQELAA 147

Query: 127 ASSETAKAEAQIAVEVAEAL 146
           A+++ A+AEAQIAVEV EA+
Sbjct: 148 AATDLARAEAQIAVEVHEAM 167



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/68 (63%), Positives = 56/68 (82%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG ITVNDDSSVQI+AE A PV+ LD  A ++ ++KAQ EL++A+++ A+AEAQI
Sbjct: 100 KYFVSSGMITVNDDSSVQILAEMAAPVEDLDPQAIKEGMTKAQQELAAAATDLARAEAQI 159

Query: 207 AVEVAEAL 214
           AVEV EA+
Sbjct: 160 AVEVHEAM 167


>gi|156382631|ref|XP_001632656.1| predicted protein [Nematostella vectensis]
 gi|156219715|gb|EDO40593.1| predicted protein [Nematostella vectensis]
          Length = 130

 Score =  146 bits (368), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 77/126 (61%), Positives = 90/126 (71%), Gaps = 1/126 (0%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           M  T AS  + FY +  V QVDV + SG+FGILP+HVPTL ++KPGV+TVYE    S K 
Sbjct: 1   MSLTFASPTEGFYRDAAVTQVDVSTTSGSFGILPSHVPTLQVIKPGVLTVYEG-STSTKY 59

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           FVSSG +TVN DS+VQI+AEEAHP+D  D  AA   L +AQ ELS ASSE  KA A IAV
Sbjct: 60  FVSSGAVTVNADSTVQILAEEAHPLDRFDVQAANKQLEEAQQELSGASSEADKASASIAV 119

Query: 141 EVAEAL 146
           E AEAL
Sbjct: 120 ECAEAL 125



 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 47/71 (66%), Positives = 52/71 (73%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG +TVN DS+VQI+AEEAHP+D  D  AA   L +AQ ELS ASSE  KA A I
Sbjct: 58  KYFVSSGAVTVNADSTVQILAEEAHPLDRFDVQAANKQLEEAQQELSGASSEADKASASI 117

Query: 207 AVEVAEALVAA 217
           AVE AEALV A
Sbjct: 118 AVECAEALVKA 128


>gi|431922218|gb|ELK19309.1| ATP synthase subunit delta, mitochondrial [Pteropus alecto]
          Length = 131

 Score =  145 bits (367), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 71/126 (56%), Positives = 94/126 (74%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           M FT AS  +VF+   NV+QVDVP+ +GAFGIL  HVPTL +L+PG++ V+  +G + K 
Sbjct: 1   MSFTFASPTQVFFNGANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTSKY 60

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           FVSSG++TVN DSSVQ++AEEA  +D LD  AA+  L KAQ+ELS A+ E A+AE QI +
Sbjct: 61  FVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELSGAADEAARAEIQIRI 120

Query: 141 EVAEAL 146
           E +EAL
Sbjct: 121 EASEAL 126



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/71 (60%), Positives = 54/71 (76%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN DSSVQ++AEEA  +D LD  AA+  L KAQ+ELS A+ E A+AE QI
Sbjct: 59  KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELSGAADEAARAEIQI 118

Query: 207 AVEVAEALVAA 217
            +E +EALV A
Sbjct: 119 RIEASEALVKA 129


>gi|345787415|ref|XP_533962.2| PREDICTED: uncharacterized protein LOC476756 isoform 1 [Canis lupus
           familiaris]
          Length = 606

 Score =  145 bits (367), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 72/127 (56%), Positives = 93/127 (73%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           QM FT AS  +VF+   NV+QVDVP+ +GAFGIL  HVPTL +L+PG++ V+  +G   K
Sbjct: 475 QMSFTFASPTQVFFNGANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGTISK 534

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 139
            FVSSG++TVN DSSVQ++AEEA  +D LD  AA+  L KAQSELS A+ E ++AE QI 
Sbjct: 535 YFVSSGSVTVNADSSVQLLAEEAVTLDMLDVGAAKMNLEKAQSELSGAADEASRAEIQIR 594

Query: 140 VEVAEAL 146
           +E  EAL
Sbjct: 595 IEANEAL 601



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/71 (60%), Positives = 53/71 (74%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN DSSVQ++AEEA  +D LD  AA+  L KAQSELS A+ E ++AE QI
Sbjct: 534 KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDVGAAKMNLEKAQSELSGAADEASRAEIQI 593

Query: 207 AVEVAEALVAA 217
            +E  EALV A
Sbjct: 594 RIEANEALVKA 604


>gi|149435351|ref|XP_001513376.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like isoform 1
           [Ornithorhynchus anatinus]
 gi|345309933|ref|XP_003428901.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like isoform 2
           [Ornithorhynchus anatinus]
          Length = 165

 Score =  145 bits (367), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 73/131 (55%), Positives = 95/131 (72%)

Query: 16  GYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEG 75
           G  +QM FT AS  +V++ + NVKQVDVP+ SGAFGIL  HVPTL +L+PGV+TV+  +G
Sbjct: 30  GGLNQMSFTFASPTQVYFNSANVKQVDVPTQSGAFGILAAHVPTLQVLRPGVVTVHAEDG 89

Query: 76  VSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAE 135
            + K FVSSG++TVN DSSVQ++AEEA  +D LD + A+  L KA SELS  S E A+AE
Sbjct: 90  TATKYFVSSGSVTVNADSSVQLLAEEAVSLDMLDLAVAKSNLEKANSELSGVSDEAARAE 149

Query: 136 AQIAVEVAEAL 146
             I +E  EA+
Sbjct: 150 VLIRIEANEAI 160



 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 41/73 (56%), Positives = 51/73 (69%)

Query: 145 ALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEA 204
           A K FVSSG++TVN DSSVQ++AEEA  +D LD + A+  L KA SELS  S E A+AE 
Sbjct: 91  ATKYFVSSGSVTVNADSSVQLLAEEAVSLDMLDLAVAKSNLEKANSELSGVSDEAARAEV 150

Query: 205 QIAVEVAEALVAA 217
            I +E  EA+V A
Sbjct: 151 LIRIEANEAIVKA 163


>gi|76162964|gb|ABA40864.1| SJCHGC07036 protein [Schistosoma japonicum]
          Length = 160

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 66/127 (51%), Positives = 93/127 (73%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           ++  T AS  +VFY +  V+QVDVP+ +G FG+LP HVPT+  LKPGV+ + E +G  +K
Sbjct: 26  ELKLTFASSGQVFYNSVAVRQVDVPTLNGRFGVLPEHVPTVGCLKPGVVAITENDGSMKK 85

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 139
            FVSSG +TVN DS++Q++AEEA  +D LD  A +D +S+AQSELS+A++E  K EAQIA
Sbjct: 86  YFVSSGIVTVNSDSTMQVLAEEAAALDQLDLQAVKDGVSRAQSELSTANTEVGKTEAQIA 145

Query: 140 VEVAEAL 146
           +E  E +
Sbjct: 146 IEAFEEM 152



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/68 (55%), Positives = 52/68 (76%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG +TVN DS++Q++AEEA  +D LD  A +D +S+AQSELS+A++E  K EAQI
Sbjct: 85  KYFVSSGIVTVNSDSTMQVLAEEAAALDQLDLQAVKDGVSRAQSELSTANTEVGKTEAQI 144

Query: 207 AVEVAEAL 214
           A+E  E +
Sbjct: 145 AIEAFEEM 152


>gi|402903541|ref|XP_003914622.1| PREDICTED: ATP synthase subunit delta, mitochondrial isoform 1
           [Papio anubis]
 gi|402903543|ref|XP_003914623.1| PREDICTED: ATP synthase subunit delta, mitochondrial isoform 2
           [Papio anubis]
          Length = 168

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 70/128 (54%), Positives = 93/128 (72%)

Query: 19  DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQ 78
           +QM FT AS  +VF+   NV+QVDVP+ +GAFGIL +HVPTL +L+PG++ V+  +G + 
Sbjct: 36  NQMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILASHVPTLQVLRPGLVVVHAEDGTTS 95

Query: 79  KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 138
           K FVSSG+I VN DSSVQ++AEEA  +D LD  AA+  L KAQ+EL  A+ E  +AE QI
Sbjct: 96  KYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELLGAADEATRAEIQI 155

Query: 139 AVEVAEAL 146
            +E  EAL
Sbjct: 156 RIEANEAL 163



 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 41/71 (57%), Positives = 50/71 (70%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG+I VN DSSVQ++AEEA  +D LD  AA+  L KAQ+EL  A+ E  +AE QI
Sbjct: 96  KYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELLGAADEATRAEIQI 155

Query: 207 AVEVAEALVAA 217
            +E  EALV A
Sbjct: 156 RIEANEALVKA 166


>gi|426229491|ref|XP_004008824.1| PREDICTED: ATP synthase subunit delta, mitochondrial [Ovis aries]
          Length = 168

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 71/127 (55%), Positives = 92/127 (72%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           QM FT AS  +VF+   NV+QVDVP+ +GAFGIL  HVPTL +L+PG++ V+  +G + K
Sbjct: 37  QMSFTFASPTQVFFNGANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTSK 96

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 139
            FVSSG++TVN DSSVQ++AEEA  +D LD  AA+  L KAQSEL  A+ E  +AE QI 
Sbjct: 97  YFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQSELLGAADEATRAEIQIR 156

Query: 140 VEVAEAL 146
           +E  EAL
Sbjct: 157 IEANEAL 163



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/71 (59%), Positives = 51/71 (71%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN DSSVQ++AEEA  +D LD  AA+  L KAQSEL  A+ E  +AE QI
Sbjct: 96  KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQSELLGAADEATRAEIQI 155

Query: 207 AVEVAEALVAA 217
            +E  EALV A
Sbjct: 156 RIEANEALVKA 166


>gi|306991571|pdb|2XND|H Chain H, Crystal Structure Of Bovine F1-C8 Sub-Complex Of Atp
           Synthase
          Length = 131

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 71/127 (55%), Positives = 93/127 (73%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           QM FT AS  +VF+ + NV+QVDVP+ +GAFGIL  HVPTL +L+PG++ V+  +G + K
Sbjct: 1   QMSFTFASPTQVFFNSANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTSK 60

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 139
            FVSSG++TVN DSSVQ++AEEA  +D LD  AA+  L KAQSEL  A+ E  +AE QI 
Sbjct: 61  YFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQSELLGAADEATRAEIQIR 120

Query: 140 VEVAEAL 146
           +E  EAL
Sbjct: 121 IEANEAL 127



 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/71 (59%), Positives = 51/71 (71%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN DSSVQ++AEEA  +D LD  AA+  L KAQSEL  A+ E  +AE QI
Sbjct: 60  KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQSELLGAADEATRAEIQI 119

Query: 207 AVEVAEALVAA 217
            +E  EALV A
Sbjct: 120 RIEANEALVKA 130


>gi|387762615|ref|NP_001248618.1| ATP synthase subunit delta, mitochondrial [Macaca mulatta]
 gi|380813460|gb|AFE78604.1| ATP synthase subunit delta, mitochondrial precursor [Macaca
           mulatta]
 gi|383418933|gb|AFH32680.1| ATP synthase subunit delta, mitochondrial precursor [Macaca
           mulatta]
          Length = 168

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 70/128 (54%), Positives = 92/128 (71%)

Query: 19  DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQ 78
           +QM FT AS  +VF+   NV+QVDVP+ +GAFGIL  HVPTL +L+PG++ V+  +G + 
Sbjct: 36  NQMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTS 95

Query: 79  KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 138
           K FVSSG+I VN DSSVQ++AEEA  +D LD  AA+  L KAQ+EL  A+ E  +AE QI
Sbjct: 96  KYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELLGAADEATRAEIQI 155

Query: 139 AVEVAEAL 146
            +E  EAL
Sbjct: 156 RIEANEAL 163



 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/71 (57%), Positives = 50/71 (70%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG+I VN DSSVQ++AEEA  +D LD  AA+  L KAQ+EL  A+ E  +AE QI
Sbjct: 96  KYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELLGAADEATRAEIQI 155

Query: 207 AVEVAEALVAA 217
            +E  EALV A
Sbjct: 156 RIEANEALVKA 166


>gi|327291976|ref|XP_003230696.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like, partial
           [Anolis carolinensis]
          Length = 121

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 72/116 (62%), Positives = 90/116 (77%)

Query: 31  VFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVN 90
           VFY   +VKQVDVP+ SGAFGIL  HVPTL +L+PGV+TV+  +G S K FVSSG++TVN
Sbjct: 1   VFYNAAHVKQVDVPTLSGAFGILAAHVPTLQVLRPGVVTVFAEDGASTKYFVSSGSVTVN 60

Query: 91  DDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
            DSSVQ++AEE   +D LD +AA+  L KA SE+++AS E+AKAEAQI VE  EAL
Sbjct: 61  ADSSVQLLAEEVALLDQLDLAAAKSNLEKALSEMAAASDESAKAEAQIRVEANEAL 116



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/71 (61%), Positives = 55/71 (77%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN DSSVQ++AEE   +D LD +AA+  L KA SE+++AS E+AKAEAQI
Sbjct: 49  KYFVSSGSVTVNADSSVQLLAEEVALLDQLDLAAAKSNLEKALSEMAAASDESAKAEAQI 108

Query: 207 AVEVAEALVAA 217
            VE  EALV A
Sbjct: 109 RVEANEALVKA 119


>gi|358252974|dbj|GAA51151.1| F-type H+-transporting ATPase subunit delta [Clonorchis sinensis]
          Length = 202

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 67/127 (52%), Positives = 95/127 (74%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           ++  T AS  +VFY  + V+QVDVP+ +G FG+L  HVPT+A L PG+++V E++G  + 
Sbjct: 68  ELTLTFASTGQVFYNKEVVRQVDVPTLTGRFGVLAEHVPTIACLMPGLVSVTESDGTVKS 127

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 139
            FVSSGT+TVN DSS+Q++AEEA  +D LD  A ++ L++AQ+EL SA ++ +KAEAQIA
Sbjct: 128 YFVSSGTVTVNSDSSMQVLAEEAATLDQLDVHAVKEGLTRAQAELLSAQTDASKAEAQIA 187

Query: 140 VEVAEAL 146
           VEV E L
Sbjct: 188 VEVYEEL 194



 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 41/69 (59%), Positives = 54/69 (78%)

Query: 149 FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 208
           FVSSGT+TVN DSS+Q++AEEA  +D LD  A ++ L++AQ+EL SA ++ +KAEAQIAV
Sbjct: 129 FVSSGTVTVNSDSSMQVLAEEAATLDQLDVHAVKEGLTRAQAELLSAQTDASKAEAQIAV 188

Query: 209 EVAEALVAA 217
           EV E L  A
Sbjct: 189 EVYEELAHA 197


>gi|311248247|ref|XP_003123039.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like isoform 1
           [Sus scrofa]
          Length = 168

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 70/127 (55%), Positives = 93/127 (73%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           QM FT AS  +VF+   NV+QVDVP+ +GAFGIL +HVPTL +L+PG++ V+  +G + K
Sbjct: 37  QMSFTFASPTQVFFNGANVRQVDVPTQTGAFGILASHVPTLQVLRPGLVVVHAEDGTTSK 96

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 139
            FVSSG++TVN DSSVQ++AEEA  +D LD   A+  L KAQSEL  A+ E ++AE QI 
Sbjct: 97  YFVSSGSVTVNADSSVQLLAEEAVTLDMLDPGVAKANLEKAQSELLGAADEASRAEIQIR 156

Query: 140 VEVAEAL 146
           +E  EAL
Sbjct: 157 IEANEAL 163



 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/71 (57%), Positives = 51/71 (71%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN DSSVQ++AEEA  +D LD   A+  L KAQSEL  A+ E ++AE QI
Sbjct: 96  KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDPGVAKANLEKAQSELLGAADEASRAEIQI 155

Query: 207 AVEVAEALVAA 217
            +E  EALV A
Sbjct: 156 RIEANEALVKA 166


>gi|297702943|ref|XP_002828417.1| PREDICTED: LOW QUALITY PROTEIN: ATP synthase subunit delta,
           mitochondrial [Pongo abelii]
          Length = 168

 Score =  142 bits (359), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 69/128 (53%), Positives = 91/128 (71%)

Query: 19  DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQ 78
           +QM FT AS  +VF+   NV+QVDVP+ +GAFGIL  HVPTL +L+PG++ V+  +G + 
Sbjct: 36  NQMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHAXDGTTS 95

Query: 79  KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 138
           K FVSSG+I VN DSSVQ++AEEA  +D LD  AA+  L KAQ+EL   + E  +AE QI
Sbjct: 96  KYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELLGTADEATRAEIQI 155

Query: 139 AVEVAEAL 146
            +E  EAL
Sbjct: 156 RIEANEAL 163



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 49/71 (69%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG+I VN DSSVQ++AEEA  +D LD  AA+  L KAQ+EL   + E  +AE QI
Sbjct: 96  KYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELLGTADEATRAEIQI 155

Query: 207 AVEVAEALVAA 217
            +E  EALV A
Sbjct: 156 RIEANEALVKA 166


>gi|426386437|ref|XP_004059691.1| PREDICTED: ATP synthase subunit delta, mitochondrial [Gorilla
           gorilla gorilla]
          Length = 168

 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 68/128 (53%), Positives = 92/128 (71%)

Query: 19  DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQ 78
           +QM FT AS  +VF+   NV+QVDVP+ +GAFGIL  HVPTL +L+PG++ V+  +G + 
Sbjct: 36  NQMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTS 95

Query: 79  KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 138
           K FVSSG++ VN DSSVQ++AEEA  +D LD  AA+  L KAQ+EL   + E  +AE QI
Sbjct: 96  KYFVSSGSVAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELVGTADEATRAEIQI 155

Query: 139 AVEVAEAL 146
            +E +EAL
Sbjct: 156 RIEASEAL 163



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/71 (54%), Positives = 50/71 (70%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++ VN DSSVQ++AEEA  +D LD  AA+  L KAQ+EL   + E  +AE QI
Sbjct: 96  KYFVSSGSVAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELVGTADEATRAEIQI 155

Query: 207 AVEVAEALVAA 217
            +E +EALV A
Sbjct: 156 RIEASEALVKA 166


>gi|395831297|ref|XP_003788739.1| PREDICTED: ATP synthase subunit delta, mitochondrial [Otolemur
           garnettii]
          Length = 168

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 69/127 (54%), Positives = 91/127 (71%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           QM F  AS  +VF+   NV+QVDVP+ +GAFGIL  HVPTL +L+PG++ V+  +G + K
Sbjct: 37  QMSFIFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVIVHAEDGTTSK 96

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 139
            FVSSG++TVN DSSVQ++AEEA  +D LD  AA+  L KAQ+ELS A+ E  +AE  I 
Sbjct: 97  YFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQTELSGAADEATRAEILIR 156

Query: 140 VEVAEAL 146
           +E  EAL
Sbjct: 157 IEANEAL 163



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/71 (57%), Positives = 51/71 (71%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN DSSVQ++AEEA  +D LD  AA+  L KAQ+ELS A+ E  +AE  I
Sbjct: 96  KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQTELSGAADEATRAEILI 155

Query: 207 AVEVAEALVAA 217
            +E  EALV A
Sbjct: 156 RIEANEALVKA 166


>gi|28603800|ref|NP_788843.1| ATP synthase subunit delta, mitochondrial precursor [Bos taurus]
 gi|114579|sp|P05630.2|ATPD_BOVIN RecName: Full=ATP synthase subunit delta, mitochondrial; AltName:
           Full=F-ATPase delta subunit; Flags: Precursor
 gi|262118401|pdb|2W6I|H Chain H, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           4b.
 gi|262118410|pdb|2W6J|H Chain H, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           5.
 gi|262306988|pdb|2W6H|H Chain H, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           4a.
 gi|110|emb|CAA34885.1| ATP synthase [Bos taurus]
 gi|148878475|gb|AAI46209.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit [Bos taurus]
 gi|296485359|tpg|DAA27474.1| TPA: ATP synthase subunit delta, mitochondrial precursor [Bos
           taurus]
          Length = 168

 Score =  142 bits (358), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 70/126 (55%), Positives = 92/126 (73%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           M FT AS  +VF+ + NV+QVDVP+ +GAFGIL  HVPTL +L+PG++ V+  +G + K 
Sbjct: 38  MSFTFASPTQVFFNSANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTSKY 97

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           FVSSG++TVN DSSVQ++AEEA  +D LD  AA+  L KAQSEL  A+ E  +AE QI +
Sbjct: 98  FVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQSELLGAADEATRAEIQIRI 157

Query: 141 EVAEAL 146
           E  EAL
Sbjct: 158 EANEAL 163



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/71 (59%), Positives = 51/71 (71%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN DSSVQ++AEEA  +D LD  AA+  L KAQSEL  A+ E  +AE QI
Sbjct: 96  KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQSELLGAADEATRAEIQI 155

Query: 207 AVEVAEALVAA 217
            +E  EALV A
Sbjct: 156 RIEANEALVKA 166


>gi|440910417|gb|ELR60215.1| ATP synthase subunit delta, mitochondrial, partial [Bos grunniens
           mutus]
          Length = 169

 Score =  142 bits (358), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 70/126 (55%), Positives = 91/126 (72%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           M FT AS  +VF+   NV+QVDVP+ +GAFGIL  HVPTL +L+PG++ V+  +G + K 
Sbjct: 39  MSFTFASPTQVFFNGANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTSKY 98

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           FVSSG++TVN DSSVQ++AEEA  +D LD  AA+  L KAQSEL  A+ E  +AE QI +
Sbjct: 99  FVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQSELLGAADEATRAEIQIRI 158

Query: 141 EVAEAL 146
           E  EAL
Sbjct: 159 EANEAL 164



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/71 (59%), Positives = 51/71 (71%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN DSSVQ++AEEA  +D LD  AA+  L KAQSEL  A+ E  +AE QI
Sbjct: 97  KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQSELLGAADEATRAEIQI 156

Query: 207 AVEVAEALVAA 217
            +E  EALV A
Sbjct: 157 RIEANEALVKA 167


>gi|4502297|ref|NP_001678.1| ATP synthase subunit delta, mitochondrial precursor [Homo sapiens]
 gi|50345991|ref|NP_001001975.1| ATP synthase subunit delta, mitochondrial precursor [Homo sapiens]
 gi|114674401|ref|XP_001147365.1| PREDICTED: ATP synthase subunit delta, mitochondrial isoform 1 [Pan
           troglodytes]
 gi|584812|sp|P30049.2|ATPD_HUMAN RecName: Full=ATP synthase subunit delta, mitochondrial; AltName:
           Full=F-ATPase delta subunit; Flags: Precursor
 gi|2911258|gb|AAC04304.1|AAC04304 ATPD_HUMAN [Homo sapiens]
 gi|12586|emb|CAA45016.1| H(+)-transporting ATP synthase [Homo sapiens]
 gi|12588|emb|CAA45017.1| H(+)-transporting ATP synthase [Homo sapiens]
 gi|247205|gb|AAA08055.1| mitochondrial ATP synthase complex delta-subunit precusor [Homo
           sapiens]
 gi|12803169|gb|AAH02389.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit [Homo sapiens]
 gi|13325214|gb|AAH04426.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit [Homo sapiens]
 gi|17390171|gb|AAH18079.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit [Homo sapiens]
 gi|49457430|emb|CAG47014.1| ATP5D [Homo sapiens]
 gi|82466497|gb|ABB76284.1| mitochondrial ATP synthase complex delta-subunit precusor [Homo
           sapiens]
 gi|119589938|gb|EAW69532.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit, isoform CRA_b [Homo sapiens]
 gi|119589939|gb|EAW69533.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit, isoform CRA_b [Homo sapiens]
 gi|119589940|gb|EAW69534.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit, isoform CRA_b [Homo sapiens]
 gi|410225900|gb|JAA10169.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit [Pan troglodytes]
 gi|410225902|gb|JAA10170.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit [Pan troglodytes]
 gi|410302936|gb|JAA30068.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit [Pan troglodytes]
          Length = 168

 Score =  142 bits (358), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 69/128 (53%), Positives = 91/128 (71%)

Query: 19  DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQ 78
           +QM FT AS  +VF+   NV+QVDVP+ +GAFGIL  HVPTL +L+PG++ V+  +G + 
Sbjct: 36  NQMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTS 95

Query: 79  KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 138
           K FVSSG+I VN DSSVQ++AEEA  +D LD  AA+  L KAQ+EL   + E  +AE QI
Sbjct: 96  KYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELVGTADEATRAEIQI 155

Query: 139 AVEVAEAL 146
            +E  EAL
Sbjct: 156 RIEANEAL 163



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 49/71 (69%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG+I VN DSSVQ++AEEA  +D LD  AA+  L KAQ+EL   + E  +AE QI
Sbjct: 96  KYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELVGTADEATRAEIQI 155

Query: 207 AVEVAEALVAA 217
            +E  EALV A
Sbjct: 156 RIEANEALVKA 166


>gi|11514063|pdb|1E79|H Chain H, Bovine F1-Atpase Inhibited By Dccd
           (Dicyclohexylcarbodiimide)
 gi|15825709|pdb|1H8E|H Chain H, (Adp.Alf4)2(Adp.So4) Bovine F1-Atpase (All Three Catalytic
           Sites Occupied)
 gi|109157337|pdb|2CK3|H Chain H, Azide Inhibited Bovine F1-Atpase
 gi|145579798|pdb|2JDI|H Chain H, Ground State Structure Of F1-Atpase From Bovine Heart
           Mitochondria (Bovine F1-Atpase Crystallised In The
           Absence Of Azide)
 gi|158431073|pdb|2V7Q|H Chain H, The Structure Of F1-Atpase Inhibited By I1-60his, A
           Monomeric Form Of The Inhibitor Protein, If1.
 gi|268612205|pdb|2WSS|H Chain H, The Structure Of The Membrane Extrinsic Region Of Bovine
           Atp Synthase
 gi|268612214|pdb|2WSS|Q Chain Q, The Structure Of The Membrane Extrinsic Region Of Bovine
           Atp Synthase
 gi|392935596|pdb|4ASU|H Chain H, F1-Atpase In Which All Three Catalytic Sites Contain Bound
           Nucleotide, With Magnesium Ion Released In The Empty
           Site
          Length = 146

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 70/126 (55%), Positives = 92/126 (73%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           M FT AS  +VF+ + NV+QVDVP+ +GAFGIL  HVPTL +L+PG++ V+  +G + K 
Sbjct: 16  MSFTFASPTQVFFNSANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTSKY 75

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           FVSSG++TVN DSSVQ++AEEA  +D LD  AA+  L KAQSEL  A+ E  +AE QI +
Sbjct: 76  FVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQSELLGAADEATRAEIQIRI 135

Query: 141 EVAEAL 146
           E  EAL
Sbjct: 136 EANEAL 141



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/71 (59%), Positives = 51/71 (71%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN DSSVQ++AEEA  +D LD  AA+  L KAQSEL  A+ E  +AE QI
Sbjct: 74  KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQSELLGAADEATRAEIQI 133

Query: 207 AVEVAEALVAA 217
            +E  EALV A
Sbjct: 134 RIEANEALVKA 144


>gi|410250112|gb|JAA13023.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit [Pan troglodytes]
 gi|410250114|gb|JAA13024.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit [Pan troglodytes]
          Length = 168

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 69/128 (53%), Positives = 91/128 (71%)

Query: 19  DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQ 78
           +QM FT AS  +VF+   NV+QVDVP+ +GAFGIL  HVPTL +L+PG++ V+  +G + 
Sbjct: 36  NQMAFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTS 95

Query: 79  KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 138
           K FVSSG+I VN DSSVQ++AEEA  +D LD  AA+  L KAQ+EL   + E  +AE QI
Sbjct: 96  KYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELVGTADEATRAEIQI 155

Query: 139 AVEVAEAL 146
            +E  EAL
Sbjct: 156 RIEANEAL 163



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 49/71 (69%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG+I VN DSSVQ++AEEA  +D LD  AA+  L KAQ+EL   + E  +AE QI
Sbjct: 96  KYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELVGTADEATRAEIQI 155

Query: 207 AVEVAEALVAA 217
            +E  EALV A
Sbjct: 156 RIEANEALVKA 166


>gi|197127889|gb|ACH44387.1| putative ATP synthase H+ transporting mitochondrial F1 complex
           delta subunit [Taeniopygia guttata]
          Length = 166

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 86/161 (53%), Positives = 110/161 (68%), Gaps = 15/161 (9%)

Query: 1   MAARLVTS-ATRLAR--------RGYADQ------MDFTLASGNKVFYTNQNVKQVDVPS 45
           MAA L      RLAR        RGYAD       M FT AS  +VFY   NVKQVDVP+
Sbjct: 1   MAAMLCARRLLRLARSSPPLPPARGYADPAGGPAAMAFTFASPTQVFYNGANVKQVDVPT 60

Query: 46  FSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPV 105
            +G+FGIL +HVPTL +L+PGV+TV+  +G + K FVSSG+++V+ DS+VQ++AEEA  +
Sbjct: 61  LTGSFGILASHVPTLQVLRPGVVTVHAEDGTATKYFVSSGSVSVHADSTVQVLAEEAVTM 120

Query: 106 DSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           D LD + A+  L KA SE+++AS E AKAEAQI VEV EAL
Sbjct: 121 DMLDLATAKSNLEKAVSEMAAASDEAAKAEAQIKVEVNEAL 161



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/73 (58%), Positives = 56/73 (76%)

Query: 145 ALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEA 204
           A K FVSSG+++V+ DS+VQ++AEEA  +D LD + A+  L KA SE+++AS E AKAEA
Sbjct: 92  ATKYFVSSGSVSVHADSTVQVLAEEAVTMDMLDLATAKSNLEKAVSEMAAASDEAAKAEA 151

Query: 205 QIAVEVAEALVAA 217
           QI VEV EALV A
Sbjct: 152 QIKVEVNEALVKA 164


>gi|197127888|gb|ACH44386.1| putative ATP synthase H+ transporting mitochondrial F1 complex
           delta subunit [Taeniopygia guttata]
          Length = 166

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/163 (52%), Positives = 109/163 (66%), Gaps = 19/163 (11%)

Query: 1   MAARLVTSATRLAR-----------RGYADQ------MDFTLASGNKVFYTNQNVKQVDV 43
           MAA L   A RL R           RGYAD       M FT AS  +VFY   NVKQVDV
Sbjct: 1   MAAML--CARRLLRIARSSPPLPPTRGYADPAGGPAAMAFTFASPTQVFYNGANVKQVDV 58

Query: 44  PSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAH 103
           P+ +G+FGIL +HVPTL +L+PGV+TV+  +G + K FVSSG+++V+ DS+VQ++AEEA 
Sbjct: 59  PTLTGSFGILASHVPTLQVLRPGVVTVHAEDGTATKYFVSSGSVSVHADSTVQVLAEEAV 118

Query: 104 PVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
            +D LD + A+  L KA SE+++AS E AKAEAQI VE  EAL
Sbjct: 119 TMDMLDLATAKSNLEKAVSEMAAASDEAAKAEAQIKVEANEAL 161



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/73 (57%), Positives = 55/73 (75%)

Query: 145 ALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEA 204
           A K FVSSG+++V+ DS+VQ++AEEA  +D LD + A+  L KA SE+++AS E AKAEA
Sbjct: 92  ATKYFVSSGSVSVHADSTVQVLAEEAVTMDMLDLATAKSNLEKAVSEMAAASDEAAKAEA 151

Query: 205 QIAVEVAEALVAA 217
           QI VE  EALV A
Sbjct: 152 QIKVEANEALVKA 164


>gi|403308177|ref|XP_003944548.1| PREDICTED: ATP synthase subunit delta, mitochondrial [Saimiri
           boliviensis boliviensis]
          Length = 170

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 65/116 (56%), Positives = 86/116 (74%)

Query: 31  VFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVN 90
           VF+   NV+QVDVP+ +GAFGIL  HVPTL +L+PG++ V+  +G + K FVSSG++TVN
Sbjct: 50  VFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTSKYFVSSGSVTVN 109

Query: 91  DDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
            DSSVQ++AEEA  +D LD  AA+  L KAQ+ELS A+ E  +AE QI +E  EAL
Sbjct: 110 ADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELSGAADEATRAEIQIRIEANEAL 165



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 42/71 (59%), Positives = 52/71 (73%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN DSSVQ++AEEA  +D LD  AA+  L KAQ+ELS A+ E  +AE QI
Sbjct: 98  KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELSGAADEATRAEIQI 157

Query: 207 AVEVAEALVAA 217
            +E  EALV A
Sbjct: 158 RIEANEALVKA 168


>gi|444509536|gb|ELV09331.1| ATP synthase subunit delta, mitochondrial [Tupaia chinensis]
          Length = 122

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 64/116 (55%), Positives = 88/116 (75%)

Query: 31  VFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVN 90
           VF++  NV+QVDVP+ +GAFGIL +HVPTL +L+PG++ V+  +G + K FVSSG++TVN
Sbjct: 2   VFFSGANVRQVDVPTLTGAFGILASHVPTLQVLRPGLVVVHAEDGTTSKYFVSSGSVTVN 61

Query: 91  DDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
            DSSVQ++AEEA  +D LD  AA+  L +AQ+ELS A+ E  +AE QI +E  EAL
Sbjct: 62  ADSSVQLLAEEAVTLDMLDLGAAKANLERAQAELSGAADEARRAEVQILIEANEAL 117



 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/71 (57%), Positives = 52/71 (73%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN DSSVQ++AEEA  +D LD  AA+  L +AQ+ELS A+ E  +AE QI
Sbjct: 50  KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLERAQAELSGAADEARRAEVQI 109

Query: 207 AVEVAEALVAA 217
            +E  EALV A
Sbjct: 110 LIEANEALVKA 120


>gi|341892304|gb|EGT48239.1| hypothetical protein CAEBREN_32792 [Caenorhabditis brenneri]
          Length = 165

 Score =  136 bits (343), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 75/158 (47%), Positives = 101/158 (63%), Gaps = 13/158 (8%)

Query: 1   MAARLVTSATRLARRGYA------------DQMDFTLASGNKVFYTNQNVKQVDVPSFSG 48
           M AR +   + +A+RG+A            D++  T AS +   ++N  VKQVDVP+ +G
Sbjct: 1   MLARTIQRFSAVAQRGFAAAAAAPAKNANPDELRLTFASPDTAVFSNAVVKQVDVPTLAG 60

Query: 49  AFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSL 108
             G+L NHVPT+ +LKPGV++V  TEG  Q++FVSSGT++VN D S Q++AEE   V+ +
Sbjct: 61  MVGVLANHVPTIGVLKPGVVSVTTTEGSVQRLFVSSGTLSVNIDGSCQVLAEEVLKVEDI 120

Query: 109 DASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           D SAAR  L  AQ   S   SE A+AEAQI  EVAEAL
Sbjct: 121 DESAARAELESAQ-RASGEGSEVARAEAQIRAEVAEAL 157



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/73 (54%), Positives = 51/73 (69%), Gaps = 1/73 (1%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           ++FVSSGT++VN D S Q++AEE   V+ +D SAAR  L  AQ   S   SE A+AEAQI
Sbjct: 91  RLFVSSGTLSVNIDGSCQVLAEEVLKVEDIDESAARAELESAQ-RASGEGSEVARAEAQI 149

Query: 207 AVEVAEALVAAAS 219
             EVAEAL+ AA+
Sbjct: 150 RAEVAEALIKAAT 162


>gi|17534525|ref|NP_495286.1| Protein F58F12.1 [Caenorhabditis elegans]
 gi|1168585|sp|Q09544.1|ATPD_CAEEL RecName: Full=ATP synthase subunit delta, mitochondrial; AltName:
           Full=F-ATPase delta subunit; Flags: Precursor
 gi|351063833|emb|CCD72069.1| Protein F58F12.1 [Caenorhabditis elegans]
          Length = 163

 Score =  136 bits (342), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 74/156 (47%), Positives = 100/156 (64%), Gaps = 11/156 (7%)

Query: 1   MAARLVTSATRLARRGYA----------DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAF 50
           M AR +   + +A+RGYA          +++  T AS +   ++N  VKQVDVP+ +G  
Sbjct: 1   MLARTIQRFSVVAKRGYAAAAPAANANPEELRLTFASPDTAVFSNAVVKQVDVPTLAGMV 60

Query: 51  GILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDA 110
           G+L NHVPT+ +LKPGV++V   EG  Q++FVSSGT++VN D S Q++AEE   V+ +D 
Sbjct: 61  GVLANHVPTIGVLKPGVVSVTTNEGTVQRLFVSSGTLSVNIDGSCQVLAEEVLKVEEIDE 120

Query: 111 SAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           SAAR  L  AQ   S   SE A+AEAQI  EVAEAL
Sbjct: 121 SAARAELDAAQ-RASGEGSEVARAEAQIRAEVAEAL 155



 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/73 (54%), Positives = 51/73 (69%), Gaps = 1/73 (1%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           ++FVSSGT++VN D S Q++AEE   V+ +D SAAR  L  AQ   S   SE A+AEAQI
Sbjct: 89  RLFVSSGTLSVNIDGSCQVLAEEVLKVEEIDESAARAELDAAQ-RASGEGSEVARAEAQI 147

Query: 207 AVEVAEALVAAAS 219
             EVAEAL+ AA+
Sbjct: 148 RAEVAEALIKAAT 160


>gi|338728774|ref|XP_001917966.2| PREDICTED: ATP synthase subunit delta, mitochondrial-like, partial
           [Equus caballus]
          Length = 142

 Score =  136 bits (342), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 67/117 (57%), Positives = 89/117 (76%)

Query: 30  KVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITV 89
           +VF+ + NV+QVDVP+ +GAFGIL  HVPTL +L+PG++ V+  +G + K FVSSG++TV
Sbjct: 21  QVFFNSANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTSKYFVSSGSVTV 80

Query: 90  NDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           N DSSVQ++AEEA  +D LD  AA+  L KAQSELS A+ E A+AE QI +E  EAL
Sbjct: 81  NADSSVQLLAEEAVTLDMLDLGAAKANLEKAQSELSGAADEAARAEIQIRIEANEAL 137



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/71 (61%), Positives = 53/71 (74%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN DSSVQ++AEEA  +D LD  AA+  L KAQSELS A+ E A+AE QI
Sbjct: 70  KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQSELSGAADEAARAEIQI 129

Query: 207 AVEVAEALVAA 217
            +E  EALV A
Sbjct: 130 RIEANEALVKA 140


>gi|297493582|gb|ADI40513.1| mitochondrial H+-transporting ATP synthase F1 complex delta subunit
           [Cynopterus sphinx]
 gi|297493584|gb|ADI40514.1| mitochondrial H+-transporting ATP synthase F1 complex delta subunit
           [Rousettus leschenaultii]
          Length = 117

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 66/116 (56%), Positives = 87/116 (75%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           FT AS  +VF+   NV+QVDVP+ +GAFGIL  HVPTL +L+PG++ V+  +G + K FV
Sbjct: 2   FTFASPTQVFFNGANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTSKYFV 61

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 138
           SSG++TVN DSSVQ++AEEA  +D LD  AA+  L KAQ+ELS A+ E A+AE QI
Sbjct: 62  SSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELSGAADEAARAEIQI 117



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/60 (61%), Positives = 46/60 (76%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN DSSVQ++AEEA  +D LD  AA+  L KAQ+ELS A+ E A+AE QI
Sbjct: 58  KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELSGAADEAARAEIQI 117


>gi|355670485|gb|AER94764.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit [Mustela putorius furo]
          Length = 120

 Score =  135 bits (341), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 67/116 (57%), Positives = 87/116 (75%)

Query: 31  VFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVN 90
           VF+   NV+QVDVP+ +GAFGIL  HVPTL +L+PG++ V+  +G + K FVSSG++TVN
Sbjct: 1   VFFNGANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTSKYFVSSGSVTVN 60

Query: 91  DDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
            DSSVQ++AEEA  +D LD  AA+  L KAQSELS A+ E ++AE QI VE  EAL
Sbjct: 61  ADSSVQLLAEEAVTLDMLDVGAAKVNLEKAQSELSGATDEASRAEIQIRVEANEAL 116



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/71 (61%), Positives = 53/71 (74%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN DSSVQ++AEEA  +D LD  AA+  L KAQSELS A+ E ++AE QI
Sbjct: 49  KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDVGAAKVNLEKAQSELSGATDEASRAEIQI 108

Query: 207 AVEVAEALVAA 217
            VE  EALV A
Sbjct: 109 RVEANEALVKA 119


>gi|260832283|ref|XP_002611087.1| hypothetical protein BRAFLDRAFT_70436 [Branchiostoma floridae]
 gi|229296457|gb|EEN67097.1| hypothetical protein BRAFLDRAFT_70436 [Branchiostoma floridae]
          Length = 166

 Score =  135 bits (341), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 71/138 (51%), Positives = 96/138 (69%), Gaps = 7/138 (5%)

Query: 13  ARRGYAD-----QMDFTLASGNKVFYTN-QNVKQVDVPSFSGAFGILPNHVPTLAILKPG 66
           A R YAD      M FT  S    FY    NV+Q+DVP+FSG  GILP+HVPTLA+LKPG
Sbjct: 23  ATRSYADAAAPVGMSFTFGSPAAAFYNAATNVRQIDVPTFSGNIGILPSHVPTLAVLKPG 82

Query: 67  VITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSS 126
            +TV+E E ++  + VSSG++TVN+DSSVQI+AEEA  ++ +D   AR  L KAQ +L++
Sbjct: 83  KLTVFEDEAINHFV-VSSGSVTVNEDSSVQILAEEACRLEDVDPQLARSGLEKAQQQLAA 141

Query: 127 ASSETAKAEAQIAVEVAE 144
           A+++  + EAQ+AVE  E
Sbjct: 142 ATTDAERTEAQVAVEFHE 159



 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/75 (50%), Positives = 55/75 (73%), Gaps = 1/75 (1%)

Query: 144 EALKIFV-SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKA 202
           EA+  FV SSG++TVN+DSSVQI+AEEA  ++ +D   AR  L KAQ +L++A+++  + 
Sbjct: 90  EAINHFVVSSGSVTVNEDSSVQILAEEACRLEDVDPQLARSGLEKAQQQLAAATTDAERT 149

Query: 203 EAQIAVEVAEALVAA 217
           EAQ+AVE  E +V A
Sbjct: 150 EAQVAVEFHEQVVKA 164


>gi|281341351|gb|EFB16935.1| hypothetical protein PANDA_012737 [Ailuropoda melanoleuca]
          Length = 122

 Score =  135 bits (341), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 66/117 (56%), Positives = 88/117 (75%)

Query: 30  KVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITV 89
           +VF+   NV+QVDVP+ +GAFGIL  HVPTL +L+PG++ V+  +G + K FVSSG++TV
Sbjct: 1   QVFFNGANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTSKYFVSSGSVTV 60

Query: 90  NDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           N DSSVQ++AEEA  +D LD  AA+  L KAQSELS A+ E ++AE QI +E  EAL
Sbjct: 61  NADSSVQLLAEEAVTLDMLDVGAAKVNLEKAQSELSGAADEASRAEIQIRIEANEAL 117



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/71 (60%), Positives = 53/71 (74%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN DSSVQ++AEEA  +D LD  AA+  L KAQSELS A+ E ++AE QI
Sbjct: 50  KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDVGAAKVNLEKAQSELSGAADEASRAEIQI 109

Query: 207 AVEVAEALVAA 217
            +E  EALV A
Sbjct: 110 RIEANEALVKA 120


>gi|308502812|ref|XP_003113590.1| hypothetical protein CRE_26546 [Caenorhabditis remanei]
 gi|308263549|gb|EFP07502.1| hypothetical protein CRE_26546 [Caenorhabditis remanei]
          Length = 165

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 73/158 (46%), Positives = 100/158 (63%), Gaps = 13/158 (8%)

Query: 1   MAARLVTSATRLARRGYA------------DQMDFTLASGNKVFYTNQNVKQVDVPSFSG 48
           M AR +   + +A+RGYA            +++  T AS +   ++N  VKQVDVP+ +G
Sbjct: 1   MLARTIQRFSAVAQRGYAAAAAAPVKNANPEELRLTFASPDTAVFSNAVVKQVDVPTLAG 60

Query: 49  AFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSL 108
             G+L NHVPT+ +LKPGV+ V   EG  Q++FVSSGT++VN D S Q++AEE   ++ +
Sbjct: 61  MVGVLANHVPTIGVLKPGVVAVTTNEGTVQRLFVSSGTLSVNIDGSCQVLAEEVLKIEDI 120

Query: 109 DASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           D SAAR  L  AQ + S   SE A+AEAQI  EVAEAL
Sbjct: 121 DESAARAELESAQ-KASGEGSEVARAEAQIRAEVAEAL 157



 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/73 (53%), Positives = 52/73 (71%), Gaps = 1/73 (1%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           ++FVSSGT++VN D S Q++AEE   ++ +D SAAR  L  AQ + S   SE A+AEAQI
Sbjct: 91  RLFVSSGTLSVNIDGSCQVLAEEVLKIEDIDESAARAELESAQ-KASGEGSEVARAEAQI 149

Query: 207 AVEVAEALVAAAS 219
             EVAEAL+ AA+
Sbjct: 150 RAEVAEALIKAAT 162


>gi|297493580|gb|ADI40512.1| mitochondrial H+-transporting ATP synthase F1 complex delta subunit
           [Miniopterus schreibersii]
          Length = 116

 Score =  134 bits (336), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 65/115 (56%), Positives = 86/115 (74%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           FT AS  +VF+   NV+QVDVP+ +GAFGIL +HVPTL +L+PG++ V+  +G + K FV
Sbjct: 2   FTFASPTQVFFNGANVRQVDVPTQTGAFGILASHVPTLQVLRPGLVVVHAEDGTTSKYFV 61

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           SSG++TVN DSSVQ++AEEA  +D LD  AA+  L KA SELS A+ E A+AE Q
Sbjct: 62  SSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAHSELSGAADEAARAEIQ 116



 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 36/59 (61%), Positives = 44/59 (74%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 205
           K FVSSG++TVN DSSVQ++AEEA  +D LD  AA+  L KA SELS A+ E A+AE Q
Sbjct: 58  KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAHSELSGAADEAARAEIQ 116


>gi|405953462|gb|EKC21119.1| ATP synthase subunit delta, mitochondrial [Crassostrea gigas]
          Length = 171

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 68/143 (47%), Positives = 98/143 (68%), Gaps = 2/143 (1%)

Query: 6   VTSATRLARRGYAD--QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAIL 63
           V+S      RGYA+   + F++AS NKVF+ ++ +KQV+VP+ +G FGILP HVPTLA+L
Sbjct: 21  VSSLQHQQLRGYAEAVGISFSMASPNKVFFKDETIKQVNVPTINGVFGILPQHVPTLAVL 80

Query: 64  KPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSE 123
           +PGV++V   +  ++ IF SSG++TVN D SV I+AEEA  +  LD + AR+ ++KAQ  
Sbjct: 81  QPGVVSVVVNDSETKNIFASSGSLTVNPDGSVHILAEEACELSDLDVNEAREGMTKAQHA 140

Query: 124 LSSASSETAKAEAQIAVEVAEAL 146
             +A   T KAE QI V+  EA+
Sbjct: 141 RDAAVEATDKAEFQIEVDAYEAI 163



 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 49/78 (62%)

Query: 138 IAVEVAEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASS 197
           + V  +E   IF SSG++TVN D SV I+AEEA  +  LD + AR+ ++KAQ    +A  
Sbjct: 87  VVVNDSETKNIFASSGSLTVNPDGSVHILAEEACELSDLDVNEAREGMTKAQHARDAAVE 146

Query: 198 ETAKAEAQIAVEVAEALV 215
            T KAE QI V+  EA++
Sbjct: 147 ATDKAEFQIEVDAYEAIL 164


>gi|268531582|ref|XP_002630918.1| Hypothetical protein CBG02643 [Caenorhabditis briggsae]
          Length = 164

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 68/128 (53%), Positives = 88/128 (68%), Gaps = 1/128 (0%)

Query: 19  DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQ 78
           D++  T AS +   ++N  VKQVDVP+ +G  G+L NHVPT+ +LKPGV+TV   EG  Q
Sbjct: 30  DELRLTFASPDTAVFSNAVVKQVDVPTLAGMVGVLANHVPTIGVLKPGVVTVTTNEGTVQ 89

Query: 79  KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 138
           ++FVSSGT++VN D S Q++AEE   V+ +D SAAR  L  AQ   S   SE A+AEAQI
Sbjct: 90  RLFVSSGTLSVNIDGSCQVLAEEVLKVEEIDESAARAELDAAQ-RASGEGSEVARAEAQI 148

Query: 139 AVEVAEAL 146
             EVAEAL
Sbjct: 149 RAEVAEAL 156



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/73 (54%), Positives = 51/73 (69%), Gaps = 1/73 (1%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           ++FVSSGT++VN D S Q++AEE   V+ +D SAAR  L  AQ   S   SE A+AEAQI
Sbjct: 90  RLFVSSGTLSVNIDGSCQVLAEEVLKVEEIDESAARAELDAAQ-RASGEGSEVARAEAQI 148

Query: 207 AVEVAEALVAAAS 219
             EVAEAL+ AA+
Sbjct: 149 RAEVAEALIKAAT 161


>gi|221121800|ref|XP_002165349.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like [Hydra
           magnipapillata]
          Length = 168

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/148 (48%), Positives = 98/148 (66%), Gaps = 7/148 (4%)

Query: 4   RLVTSATRLARRGYAD-----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVP 58
           R++ S T+ +RR YAD      +  T  +  + F+ N  V QVDVPS SG F IL  HVP
Sbjct: 16  RILQSVTK-SRRSYADVGPSDSLSLTFGTPRETFFNNAVVTQVDVPSGSGNFCILAQHVP 74

Query: 59  TLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLS 118
            +A+L+PG++TV + +G  +K FVSSGTITVN DS+ QI+AEEA P+D  D ++AR    
Sbjct: 75  IIAVLRPGLLTVTK-DGSVEKYFVSSGTITVNKDSTAQILAEEASPLDRFDLNSARKAAE 133

Query: 119 KAQSELSSASSETAKAEAQIAVEVAEAL 146
            A+S LS A++E  KAEAQI V+  +AL
Sbjct: 134 DARSALSVANTEALKAEAQIQVDTCDAL 161


>gi|221115652|ref|XP_002167886.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like [Hydra
           magnipapillata]
          Length = 168

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/148 (48%), Positives = 98/148 (66%), Gaps = 7/148 (4%)

Query: 4   RLVTSATRLARRGYAD-----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVP 58
           R++ S T+ +RR YAD      +  T  +  + F+ N  V QVDVPS SG F IL  HVP
Sbjct: 16  RILQSVTK-SRRSYADVGPSDSLSLTFGTPRETFFNNTVVTQVDVPSGSGNFCILAQHVP 74

Query: 59  TLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLS 118
            +A+L+PG++TV + +G  +K FVSSGTITVN DS+ QI+AEEA P+D  D ++AR    
Sbjct: 75  IIAVLRPGLLTVTK-DGSVEKYFVSSGTITVNKDSTAQILAEEASPLDRFDLNSARKAAE 133

Query: 119 KAQSELSSASSETAKAEAQIAVEVAEAL 146
            A+S LS A++E  KAEAQI V+  +AL
Sbjct: 134 DARSALSIANTEALKAEAQIQVDTCDAL 161


>gi|344307872|ref|XP_003422602.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like
           [Loxodonta africana]
          Length = 130

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 63/116 (54%), Positives = 86/116 (74%)

Query: 31  VFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVN 90
           VF+   +V+QVDVP+ +GAFGIL +HVPTL +L+PG++ V+  +G + K FVSSG++TVN
Sbjct: 10  VFFNGAHVRQVDVPTQTGAFGILASHVPTLQVLRPGLVVVHAEDGTTTKYFVSSGSVTVN 69

Query: 91  DDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
            DSSVQ++AEEA  +D LD  AA+  L KAQ+ELS A+    +AE QI +E  EAL
Sbjct: 70  ADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELSGAADGAQRAEIQIRIEAGEAL 125



 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/71 (57%), Positives = 51/71 (71%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN DSSVQ++AEEA  +D LD  AA+  L KAQ+ELS A+    +AE QI
Sbjct: 58  KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELSGAADGAQRAEIQI 117

Query: 207 AVEVAEALVAA 217
            +E  EALV A
Sbjct: 118 RIEAGEALVKA 128


>gi|320169944|gb|EFW46843.1| ATP synthase subunit delta [Capsaspora owczarzaki ATCC 30864]
          Length = 163

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 65/129 (50%), Positives = 92/129 (71%), Gaps = 1/129 (0%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
            D++  T ++ +  F+  + + QV+VP+ SG FGIL NHVPT+A L+PGV+TV E +G  
Sbjct: 31  GDKVRLTFSTPDGSFFNAKAITQVNVPATSGDFGILVNHVPTIACLRPGVVTVVE-DGKE 89

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
            K FVSSGT+TVN+DSSVQI+AEEA P+D  DA+AA+  L +A    +SA ++  +A+A+
Sbjct: 90  SKFFVSSGTVTVNNDSSVQIVAEEAAPLDQFDAAAAKSGLDQATQRAASAGNDADRAKAE 149

Query: 138 IAVEVAEAL 146
           I VEV  AL
Sbjct: 150 IGVEVYRAL 158



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/78 (53%), Positives = 56/78 (71%)

Query: 140 VEVAEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSET 199
           VE  +  K FVSSGT+TVN+DSSVQI+AEEA P+D  DA+AA+  L +A    +SA ++ 
Sbjct: 84  VEDGKESKFFVSSGTVTVNNDSSVQIVAEEAAPLDQFDAAAAKSGLDQATQRAASAGNDA 143

Query: 200 AKAEAQIAVEVAEALVAA 217
            +A+A+I VEV  ALV A
Sbjct: 144 DRAKAEIGVEVYRALVTA 161


>gi|397485343|ref|XP_003813810.1| PREDICTED: uncharacterized protein LOC100994478 [Pan paniscus]
          Length = 324

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 63/117 (53%), Positives = 84/117 (71%)

Query: 30  KVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITV 89
           +VF+   NV+QVDVP+ +GAFGIL  HVPTL +L+PG++ V+  +G + K FVSSG+I V
Sbjct: 203 QVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTSKYFVSSGSIAV 262

Query: 90  NDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           N DSSVQ++AEEA  +D LD  AA+  L KAQ+EL   + E  +AE QI +E  EAL
Sbjct: 263 NADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELVGTADEATRAEIQIRIEANEAL 319



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 49/71 (69%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG+I VN DSSVQ++AEEA  +D LD  AA+  L KAQ+EL   + E  +AE QI
Sbjct: 252 KYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELVGTADEATRAEIQI 311

Query: 207 AVEVAEALVAA 217
            +E  EALV A
Sbjct: 312 RIEANEALVKA 322


>gi|363745992|ref|XP_001234760.2| PREDICTED: ATP synthase subunit delta, mitochondrial-like, partial
           [Gallus gallus]
          Length = 123

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 69/117 (58%), Positives = 90/117 (76%)

Query: 30  KVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITV 89
           +VFY    VKQVDVP+ +G+FGIL +HVPTL +LKPGV+TVY  +G + K FVSSG++TV
Sbjct: 2   QVFYNGTTVKQVDVPTLTGSFGILASHVPTLQVLKPGVVTVYAEDGTATKYFVSSGSVTV 61

Query: 90  NDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           N DS+VQ++AEEA  +D LD + A+  L KA SE+++AS E A+AEAQI VE  EAL
Sbjct: 62  NADSTVQVLAEEAVTMDMLDLATAKSNLEKAVSEMAAASDEAARAEAQIKVEANEAL 118



 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 43/73 (58%), Positives = 55/73 (75%)

Query: 145 ALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEA 204
           A K FVSSG++TVN DS+VQ++AEEA  +D LD + A+  L KA SE+++AS E A+AEA
Sbjct: 49  ATKYFVSSGSVTVNADSTVQVLAEEAVTMDMLDLATAKSNLEKAVSEMAAASDEAARAEA 108

Query: 205 QIAVEVAEALVAA 217
           QI VE  EALV A
Sbjct: 109 QIKVEANEALVKA 121


>gi|449273020|gb|EMC82649.1| ATP synthase subunit delta, mitochondrial, partial [Columba livia]
          Length = 126

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 70/117 (59%), Positives = 91/117 (77%)

Query: 30  KVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITV 89
           +VFY   NVKQVDVP+ +G+FGIL +HVPTL +LKPGV+TVY  +G + K FVSSG++TV
Sbjct: 5   QVFYNGANVKQVDVPTLTGSFGILASHVPTLQVLKPGVVTVYAEDGTATKYFVSSGSVTV 64

Query: 90  NDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           + DS+VQ++AEEA  +D LD + A+  L KA SE+++AS E AKAEAQI VE  EAL
Sbjct: 65  HADSTVQVLAEEAVTMDMLDLATAKSNLEKAVSEMAAASDEAAKAEAQIKVEANEAL 121



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/73 (58%), Positives = 55/73 (75%)

Query: 145 ALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEA 204
           A K FVSSG++TV+ DS+VQ++AEEA  +D LD + A+  L KA SE+++AS E AKAEA
Sbjct: 52  ATKYFVSSGSVTVHADSTVQVLAEEAVTMDMLDLATAKSNLEKAVSEMAAASDEAAKAEA 111

Query: 205 QIAVEVAEALVAA 217
           QI VE  EALV A
Sbjct: 112 QIKVEANEALVKA 124


>gi|324510963|gb|ADY44575.1| ATP synthase subunit delta [Ascaris suum]
          Length = 173

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 58/129 (44%), Positives = 86/129 (66%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           ++++    A+ ++ F+T+  +KQVDVP+ +G  G+L  HVPTL +LKPGV+ + + +G  
Sbjct: 37  SEELKLIFAAPDRAFFTDTVIKQVDVPTVAGVVGVLAKHVPTLGVLKPGVVQITDLDGNQ 96

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
            K+FVSSGT ++N D + Q++AEEA PV+ +D S AR  L  AQ  +    SE  KAEA 
Sbjct: 97  TKMFVSSGTFSMNIDGTCQVLAEEAVPVEDIDESLARQELEAAQRRIQEGGSEVDKAEAA 156

Query: 138 IAVEVAEAL 146
           I +EV EAL
Sbjct: 157 ITIEVCEAL 165



 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/71 (50%), Positives = 47/71 (66%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K+FVSSGT ++N D + Q++AEEA PV+ +D S AR  L  AQ  +    SE  KAEA I
Sbjct: 98  KMFVSSGTFSMNIDGTCQVLAEEAVPVEDIDESLARQELEAAQRRIQEGGSEVDKAEAAI 157

Query: 207 AVEVAEALVAA 217
            +EV EAL+ A
Sbjct: 158 TIEVCEALIKA 168


>gi|355755273|gb|EHH59020.1| F-ATPase delta subunit, partial [Macaca fascicularis]
          Length = 123

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 61/117 (52%), Positives = 81/117 (69%)

Query: 30  KVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITV 89
           +VF+   NV+QVDVP+ +GAFGIL  HVPTL +L+PG++ V+  +G + K FVSSG+I V
Sbjct: 2   QVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTSKYFVSSGSIAV 61

Query: 90  NDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           N DSSVQ++AEEA         AA+  L KAQ+EL  A+ E  +AE QI +E  EAL
Sbjct: 62  NADSSVQLLAEEAVTASLNPLQAAKANLEKAQAELLGAADEATRAEIQIRIEANEAL 118



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/71 (53%), Positives = 46/71 (64%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG+I VN DSSVQ++AEEA         AA+  L KAQ+EL  A+ E  +AE QI
Sbjct: 51  KYFVSSGSIAVNADSSVQLLAEEAVTASLNPLQAAKANLEKAQAELLGAADEATRAEIQI 110

Query: 207 AVEVAEALVAA 217
            +E  EALV A
Sbjct: 111 RIEANEALVKA 121


>gi|148699644|gb|EDL31591.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit, isoform CRA_b [Mus musculus]
          Length = 186

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 54/103 (52%), Positives = 75/103 (72%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           QM FT AS  +VF+ + NVKQVDVP+ +GAFGIL +HVPTL +L+PG++ V+  +G + K
Sbjct: 62  QMSFTFASPTQVFFDSANVKQVDVPTLTGAFGILASHVPTLQVLRPGLVVVHTEDGTTTK 121

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQS 122
            FVSSG++TVN DSSVQ++AEEA  +D LD         ++Q+
Sbjct: 122 YFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGPGPTWRRRSQN 164



 Score = 45.1 bits (105), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 22/44 (50%), Positives = 30/44 (68%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQS 190
           K FVSSG++TVN DSSVQ++AEEA  +D LD         ++Q+
Sbjct: 121 KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGPGPTWRRRSQN 164


>gi|324105219|gb|ADY18372.1| mitochondrial ATP synthase delta chain [Glycera tridactyla]
          Length = 85

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 56/82 (68%), Positives = 64/82 (78%), Gaps = 2/82 (2%)

Query: 14 RRGYADQMDFTLASGN-KVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYE 72
          R GYAD M FT A G    FY   NVKQVDVPSFSG+FGILP+HVP LA+LKPGV+TV E
Sbjct: 5  RNGYAD-MAFTFARGEVPTFYDRANVKQVDVPSFSGSFGILPDHVPLLAVLKPGVVTVQE 63

Query: 73 TEGVSQKIFVSSGTITVNDDSS 94
           +G S+K  VSSG+IT+NDDSS
Sbjct: 64 QDGASKKFXVSSGSITINDDSS 85


>gi|326935561|ref|XP_003213838.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like
           [Meleagris gallopavo]
          Length = 144

 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 50/81 (61%), Positives = 66/81 (81%)

Query: 29  NKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTIT 88
           ++VFY   NVKQVDVP+ +G+FGIL +HVPTL +LKPGV+TVY  +G + K FVSSG++T
Sbjct: 52  SRVFYNGANVKQVDVPTLTGSFGILASHVPTLQVLKPGVVTVYGEDGTATKYFVSSGSVT 111

Query: 89  VNDDSSVQIIAEEAHPVDSLD 109
           VN DS+VQ++AEEA  +D LD
Sbjct: 112 VNADSTVQVLAEEAVTMDMLD 132



 Score = 44.7 bits (104), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 28/37 (75%)

Query: 141 EVAEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLD 177
           E   A K FVSSG++TVN DS+VQ++AEEA  +D LD
Sbjct: 96  EDGTATKYFVSSGSVTVNADSTVQVLAEEAVTMDMLD 132


>gi|341892271|gb|EGT48206.1| hypothetical protein CAEBREN_24996 [Caenorhabditis brenneri]
          Length = 399

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/121 (49%), Positives = 82/121 (67%), Gaps = 1/121 (0%)

Query: 27  SGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGT 86
           S N   +++  VKQVDVP+ +G  G+L NHVPT+ +LKPGV++V  TEG  Q++FVSSGT
Sbjct: 7   SPNTAVFSDAVVKQVDVPTLAGMVGVLANHVPTIGVLKPGVVSVTTTEGSVQRLFVSSGT 66

Query: 87  ITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           ++VN D S Q++AEE   V+ +D SAAR  L  AQ   S   SE A+AEAQ + +  E L
Sbjct: 67  LSVNIDGSCQVLAEEVLKVEDIDESAARAELESAQR-ASGEGSEVARAEAQGSEKTTEYL 125

Query: 147 K 147
           +
Sbjct: 126 E 126



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 1/68 (1%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           ++FVSSGT++VN D S Q++AEE   V+ +D SAAR  L  AQ   S   SE A+AEAQ 
Sbjct: 59  RLFVSSGTLSVNIDGSCQVLAEEVLKVEDIDESAARAELESAQR-ASGEGSEVARAEAQG 117

Query: 207 AVEVAEAL 214
           + +  E L
Sbjct: 118 SEKTTEYL 125


>gi|149034589|gb|EDL89326.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit, isoform CRA_d [Rattus norvegicus]
          Length = 190

 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/85 (57%), Positives = 66/85 (77%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           QM FT AS  +VF+   NV+QVDVP+ +GAFGIL +HVPTL +L+PG++ V+  +G + K
Sbjct: 37  QMSFTFASPTQVFFDGANVRQVDVPTLTGAFGILASHVPTLQVLRPGLVVVHAEDGTTTK 96

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHP 104
            FVSSG++TVN DSSVQ++AEE  P
Sbjct: 97  YFVSSGSVTVNADSSVQLLAEEVSP 121



 Score = 40.8 bits (94), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 18/26 (69%), Positives = 22/26 (84%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHP 172
           K FVSSG++TVN DSSVQ++AEE  P
Sbjct: 96  KYFVSSGSVTVNADSSVQLLAEEVSP 121


>gi|312073584|ref|XP_003139586.1| ATP synthase subunit delta [Loa loa]
          Length = 174

 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/164 (36%), Positives = 91/164 (55%), Gaps = 18/164 (10%)

Query: 1   MAARLVTSATRLARRGYA------------------DQMDFTLASGNKVFYTNQNVKQVD 42
           ++ R +   + + RR YA                  D++  T AS  +VF+ N  VKQVD
Sbjct: 2   LSGRNIKGLSNILRRCYAAAVETAQNATKEASVANIDELRLTFASPIEVFFNNAVVKQVD 61

Query: 43  VPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEA 102
           + + +G+ GILP HVP L +LKPGV+ V + +  S + F SSGT+++N D S Q++AEEA
Sbjct: 62  ISTLNGSIGILPKHVPVLGMLKPGVVRVVDKDDKSVQYFASSGTLSMNPDGSCQVLAEEA 121

Query: 103 HPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
             ++ +D + A + LS AQ        + A+A  QI +E  EAL
Sbjct: 122 IRLEDIDLAKAEEELSSAQRRALEPMEDDARAVVQIEIETYEAL 165



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 47/75 (62%)

Query: 144 EALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAE 203
           ++++ F SSGT+++N D S Q++AEEA  ++ +D + A + LS AQ        + A+A 
Sbjct: 95  KSVQYFASSGTLSMNPDGSCQVLAEEAIRLEDIDLAKAEEELSSAQRRALEPMEDDARAV 154

Query: 204 AQIAVEVAEALVAAA 218
            QI +E  EALV AA
Sbjct: 155 VQIEIETYEALVKAA 169


>gi|170596826|ref|XP_001902910.1| ATP synthase delta chain, mitochondrial precursor [Brugia malayi]
 gi|158589119|gb|EDP28244.1| ATP synthase delta chain, mitochondrial precursor, putative [Brugia
           malayi]
          Length = 173

 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 91/163 (55%), Gaps = 17/163 (10%)

Query: 1   MAARLVTSATRLARRGYA-----------------DQMDFTLASGNKVFYTNQNVKQVDV 43
           ++ R +   + + RR YA                 D++  T AS  +VF+ N  VKQVD+
Sbjct: 2   LSRRNIHRLSNILRRCYAAVETVQNVTKEAPAVNVDELRLTFASPVEVFFNNTVVKQVDI 61

Query: 44  PSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAH 103
            + +G+ GILP HVP L +LKPGV+ V + +  S + F SSGT+++N D S Q++AEEA 
Sbjct: 62  STLNGSIGILPKHVPVLGMLKPGVVRVVDKDDKSIQYFASSGTLSMNPDGSCQVLAEEAI 121

Query: 104 PVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
            ++ +D + A + LS AQ        + A+A  QI +E  EAL
Sbjct: 122 RLEDIDLAKAEEELSSAQRRALEPMEDDARAAVQIEIETYEAL 164



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 47/75 (62%)

Query: 144 EALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAE 203
           ++++ F SSGT+++N D S Q++AEEA  ++ +D + A + LS AQ        + A+A 
Sbjct: 94  KSIQYFASSGTLSMNPDGSCQVLAEEAIRLEDIDLAKAEEELSSAQRRALEPMEDDARAA 153

Query: 204 AQIAVEVAEALVAAA 218
            QI +E  EAL+ AA
Sbjct: 154 VQIEIETYEALIKAA 168


>gi|341899011|gb|EGT54946.1| hypothetical protein CAEBREN_23479 [Caenorhabditis brenneri]
          Length = 304

 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 58/110 (52%), Positives = 77/110 (70%), Gaps = 1/110 (0%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           VKQVDVP+ +G  G+L NHVPT+ +LKPGV++V  TEG  Q++FVSSGT++VN D S Q+
Sbjct: 59  VKQVDVPTSAGMVGVLANHVPTIGVLKPGVVSVTTTEGSVQRLFVSSGTLSVNIDGSCQV 118

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
           +AEE   V+ +D SAAR  L  AQ   S   SE A+AEAQ + +  E L+
Sbjct: 119 LAEEVLKVEDIDESAARAELESAQ-RASGEGSEVARAEAQGSEKTTEYLE 167


>gi|393910030|gb|EFO24487.2| ATP synthase subunit delta [Loa loa]
          Length = 227

 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 60/164 (36%), Positives = 91/164 (55%), Gaps = 18/164 (10%)

Query: 1   MAARLVTSATRLARRGYA------------------DQMDFTLASGNKVFYTNQNVKQVD 42
           ++ R +   + + RR YA                  D++  T AS  +VF+ N  VKQVD
Sbjct: 55  LSGRNIKGLSNILRRCYAAAVETAQNATKEASVANIDELRLTFASPIEVFFNNAVVKQVD 114

Query: 43  VPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEA 102
           + + +G+ GILP HVP L +LKPGV+ V + +  S + F SSGT+++N D S Q++AEEA
Sbjct: 115 ISTLNGSIGILPKHVPVLGMLKPGVVRVVDKDDKSVQYFASSGTLSMNPDGSCQVLAEEA 174

Query: 103 HPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
             ++ +D + A + LS AQ        + A+A  QI +E  EAL
Sbjct: 175 IRLEDIDLAKAEEELSSAQRRALEPMEDDARAVVQIEIETYEAL 218



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 47/75 (62%)

Query: 144 EALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAE 203
           ++++ F SSGT+++N D S Q++AEEA  ++ +D + A + LS AQ        + A+A 
Sbjct: 148 KSVQYFASSGTLSMNPDGSCQVLAEEAIRLEDIDLAKAEEELSSAQRRALEPMEDDARAV 207

Query: 204 AQIAVEVAEALVAAA 218
            QI +E  EALV AA
Sbjct: 208 VQIEIETYEALVKAA 222


>gi|346324930|gb|EGX94527.1| ATP synthase delta chain, putative [Cordyceps militaris CM01]
          Length = 165

 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 92/148 (62%), Gaps = 6/148 (4%)

Query: 9   ATRLA--RRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAI 62
           A R+A  RRGYA    D++  +L+  ++  + +QNV QV++P+ SG  G+L NHVP++  
Sbjct: 17  AMRMAAQRRGYAEAIPDKIKLSLSLPHQTIFKSQNVVQVNIPAESGDMGVLANHVPSIEQ 76

Query: 63  LKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQS 122
           LKPG++ V E  G ++  F+S G  TV  DSS+ I A EA+P++   A A R+ +++AQ 
Sbjct: 77  LKPGIVEVVEENGSTKSFFLSGGFATVQPDSSLSINAPEAYPLEDFSAEAIRNQIAEAQK 136

Query: 123 ELSSASSETAKAEAQIAVEVAEALKIFV 150
             S + SE   AEA+I +EV E L   V
Sbjct: 137 IASGSGSEQDIAEAKIELEVLETLHAHV 164



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 42/69 (60%)

Query: 148 IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 207
            F+S G  TV  DSS+ I A EA+P++   A A R+ +++AQ   S + SE   AEA+I 
Sbjct: 94  FFLSGGFATVQPDSSLSINAPEAYPLEDFSAEAIRNQIAEAQKIASGSGSEQDIAEAKIE 153

Query: 208 VEVAEALVA 216
           +EV E L A
Sbjct: 154 LEVLETLHA 162


>gi|400602444|gb|EJP70046.1| ATP synthase delta chain [Beauveria bassiana ARSEF 2860]
          Length = 165

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 92/148 (62%), Gaps = 6/148 (4%)

Query: 9   ATRLA--RRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAI 62
           A R+A  RRGYA    D++  +L+  ++  + +QNV QV++P+ SG  G+L NH P++  
Sbjct: 17  AMRMANQRRGYAEAIPDKIKLSLSLPHQTIFKSQNVVQVNLPAESGEMGVLANHAPSIEQ 76

Query: 63  LKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQS 122
           LKPGV+ V E  G ++  F+S G  TV  DS++ I A EA+P++   A A R+ +S+AQ 
Sbjct: 77  LKPGVVEVVEESGSTKSFFLSGGFATVQPDSALSINAPEAYPLEDFSAEAIRNQISEAQK 136

Query: 123 ELSSASSETAKAEAQIAVEVAEALKIFV 150
             S + SE   AEA+I +EV E L+  V
Sbjct: 137 IASGSGSEQDIAEAKIELEVLETLQAHV 164



 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 42/69 (60%)

Query: 148 IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 207
            F+S G  TV  DS++ I A EA+P++   A A R+ +S+AQ   S + SE   AEA+I 
Sbjct: 94  FFLSGGFATVQPDSALSINAPEAYPLEDFSAEAIRNQISEAQKIASGSGSEQDIAEAKIE 153

Query: 208 VEVAEALVA 216
           +EV E L A
Sbjct: 154 LEVLETLQA 162


>gi|395517753|ref|XP_003763038.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like
           [Sarcophilus harrisii]
          Length = 161

 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 51/80 (63%), Positives = 64/80 (80%)

Query: 30  KVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITV 89
           KV++   NVKQVDVP+ SGAFGIL  HVPTL +LKPGV+TV+  +G + K FVSSG++TV
Sbjct: 39  KVYFNEANVKQVDVPTQSGAFGILAAHVPTLQVLKPGVVTVHAEDGTTTKYFVSSGSVTV 98

Query: 90  NDDSSVQIIAEEAHPVDSLD 109
           N DSSVQ++AEEA  +D LD
Sbjct: 99  NADSSVQLLAEEAVALDMLD 118



 Score = 43.5 bits (101), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 21/31 (67%), Positives = 26/31 (83%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLD 177
           K FVSSG++TVN DSSVQ++AEEA  +D LD
Sbjct: 88  KYFVSSGSVTVNADSSVQLLAEEAVALDMLD 118


>gi|170092345|ref|XP_001877394.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164647253|gb|EDR11497.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 163

 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 62/154 (40%), Positives = 93/154 (60%), Gaps = 10/154 (6%)

Query: 4   RLVTSATR------LARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGIL 53
           RLV+SA R      +ARRGYA    D++  +LA  +K  +T+Q+V QV++P+ SG  GIL
Sbjct: 5   RLVSSAVRRATTFSIARRGYAEAVSDKLKLSLALPHKSIFTSQDVVQVNIPAESGDMGIL 64

Query: 54  PNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAA 113
            NHVP++  ++PGVI V E+   SQK FVS G  TV+ ++ + I   E  P++     A 
Sbjct: 65  SNHVPSIEAIRPGVIEVIESNAGSQKFFVSGGFATVHPNNKLTINVVEGAPLEDFSIEAI 124

Query: 114 RDVLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
           R  L++A    + + SE  K EA+I  +V E+L+
Sbjct: 125 RSNLAEALKVAAGSGSEAEKMEARIEADVYESLQ 158


>gi|336111708|gb|AEI16514.1| mitochondrial ATP synthase subunit delta precursor [Chelon
           labrosus]
          Length = 96

 Score =  106 bits (264), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 52/91 (57%), Positives = 72/91 (79%)

Query: 56  HVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARD 115
           HVPTL +L+PGV+TV+  +G S K FVSSG++TV  D+SVQ++AEEA P+D LDA+AA+ 
Sbjct: 1   HVPTLQVLRPGVVTVFNDDGSSVKYFVSSGSVTVXADASVQLLAEEAVPLDQLDAAAAKA 60

Query: 116 VLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
            L +AQSEL++ S E A+AE QI++E  EA+
Sbjct: 61  NLEQAQSELAATSDEAARAEVQISIEANEAI 91



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 41/72 (56%), Positives = 57/72 (79%)

Query: 146 LKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 205
           +K FVSSG++TV  D+SVQ++AEEA P+D LDA+AA+  L +AQSEL++ S E A+AE Q
Sbjct: 23  VKYFVSSGSVTVXADASVQLLAEEAVPLDQLDAAAAKANLEQAQSELAATSDEAARAEVQ 82

Query: 206 IAVEVAEALVAA 217
           I++E  EA+V A
Sbjct: 83  ISIEANEAIVKA 94


>gi|452987945|gb|EME87700.1| hypothetical protein MYCFIDRAFT_54841 [Pseudocercospora fijiensis
           CIRAD86]
          Length = 166

 Score =  105 bits (263), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 56/138 (40%), Positives = 88/138 (63%), Gaps = 4/138 (2%)

Query: 14  RRGYAD----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVIT 69
           RRGYAD    ++  TLA  ++  Y +Q+V QV++P+ SG  G+L +HVP++  LKPG++ 
Sbjct: 25  RRGYADVAPDKIQLTLALPHQAIYKSQDVVQVNIPAESGEMGVLASHVPSIEQLKPGLVE 84

Query: 70  VYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASS 129
           V E +G S++ F+S G  TV  +S + I A E +P++   A A R+ +++AQ   S   S
Sbjct: 85  VIEEQGGSKQFFLSGGFATVQPNSVLSINAVEGYPLEDFSAEAVRNQIAEAQKIASGGGS 144

Query: 130 ETAKAEAQIAVEVAEALK 147
           E   AEA+I +EV E+L+
Sbjct: 145 EQDVAEAKIELEVLESLQ 162


>gi|453089229|gb|EMF17269.1| epsilon subunit of F1F0-ATP synthase N-terminal domain-containing
           protein [Mycosphaerella populorum SO2202]
          Length = 166

 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/153 (39%), Positives = 95/153 (62%), Gaps = 7/153 (4%)

Query: 2   AARLVTSATRLA---RRGYAD----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILP 54
           A R   SA R A   RRGYAD    ++  TLA  ++  Y +++V QV++P+ SG  G+L 
Sbjct: 10  AVRAAPSAFRAAPALRRGYADVASDKIQLTLALPHQAIYKSKDVVQVNIPAESGEMGVLA 69

Query: 55  NHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAAR 114
           +HVP++  LKPG++ V E +G S++ F+S G  TV  +S + I A E +P+++  A A R
Sbjct: 70  SHVPSIEQLKPGLVEVIEEQGGSKQFFLSGGFATVQPNSVLSINAVEGYPLEAFSAEAVR 129

Query: 115 DVLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
           + +++AQ   S + SE   AEA+I +EV E L+
Sbjct: 130 NQIAEAQKIASGSGSEQDIAEAKIELEVLETLQ 162


>gi|169847185|ref|XP_001830304.1| ATP-synthase delta-subunit [Coprinopsis cinerea okayama7#130]
 gi|116508556|gb|EAU91451.1| ATP-synthase delta-subunit [Coprinopsis cinerea okayama7#130]
          Length = 161

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/153 (41%), Positives = 92/153 (60%), Gaps = 10/153 (6%)

Query: 4   RLVTSATR------LARRGYAD---QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILP 54
           RL++S  R      L RRGYAD   ++  +L   +K  +T+Q+V QV++P+ SG  GIL 
Sbjct: 5   RLLSSVARRAPAFALGRRGYADVSDKLKLSLVLPHKAIFTSQDVVQVNIPAESGDMGILA 64

Query: 55  NHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAAR 114
           NHVP++  L+PGV+ V E+ G +QK FVSSG  TV+ ++ + I   EA P++     A R
Sbjct: 65  NHVPSIESLRPGVVEVMESSG-TQKFFVSSGFATVHPNNKLTINVVEAAPLEDFSLEAIR 123

Query: 115 DVLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
             L++A    S   SE  K EA+I  +V EAL+
Sbjct: 124 ANLAEATKVASGNGSEEVKTEARIEADVYEALQ 156



 Score = 41.2 bits (95), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 42/78 (53%), Gaps = 3/78 (3%)

Query: 140 VEVAEA---LKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS 196
           VEV E+    K FVSSG  TV+ ++ + I   EA P++     A R  L++A    S   
Sbjct: 78  VEVMESSGTQKFFVSSGFATVHPNNKLTINVVEAAPLEDFSLEAIRANLAEATKVASGNG 137

Query: 197 SETAKAEAQIAVEVAEAL 214
           SE  K EA+I  +V EAL
Sbjct: 138 SEEVKTEARIEADVYEAL 155


>gi|409080272|gb|EKM80632.1| ATP16 delta subunit of the central stalk of mitochondrial F1F0 ATP
           synthase [Agaricus bisporus var. burnettii JB137-S8]
          Length = 162

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/149 (42%), Positives = 90/149 (60%), Gaps = 4/149 (2%)

Query: 2   AARLVTSATRLARRGYA---DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVP 58
           AAR  T+    ARRGYA   D++  +LA  +K  +++Q+V QV++P+ SG  GIL +HVP
Sbjct: 10  AARRATTHVAYARRGYAEISDKLKLSLALPHKAIFSSQDVVQVNIPAESGDMGILSSHVP 69

Query: 59  TLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLS 118
           ++  L+PGV+ V E  G SQK FVS G  TV+ ++ + I   EA P++     A R  L 
Sbjct: 70  SIEPLRPGVVEVVEDSG-SQKWFVSGGFATVHPNNRLTINVVEAAPLEDFSIEAIRANLQ 128

Query: 119 KAQSELSSASSETAKAEAQIAVEVAEALK 147
           +A    + + SE  K EAQI  EV EAL+
Sbjct: 129 EANKVAAGSGSEADKMEAQIEAEVYEALQ 157



 Score = 40.8 bits (94), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 41/78 (52%), Gaps = 3/78 (3%)

Query: 140 VEVAE---ALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS 196
           VEV E   + K FVS G  TV+ ++ + I   EA P++     A R  L +A    + + 
Sbjct: 79  VEVVEDSGSQKWFVSGGFATVHPNNRLTINVVEAAPLEDFSIEAIRANLQEANKVAAGSG 138

Query: 197 SETAKAEAQIAVEVAEAL 214
           SE  K EAQI  EV EAL
Sbjct: 139 SEADKMEAQIEAEVYEAL 156


>gi|358391990|gb|EHK41394.1| F1F0 ATP synthase delta chain mitochondrial precursor [Trichoderma
           atroviride IMI 206040]
          Length = 165

 Score =  103 bits (258), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/152 (40%), Positives = 93/152 (61%), Gaps = 6/152 (3%)

Query: 1   MAARLVTSATRLA--RRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILP 54
           +A R   SA R+A  RRGYA    D++  +LA  ++  Y +Q+V QV++P+ SG  G+L 
Sbjct: 9   VALRARPSAMRVAFQRRGYAEAVPDKIKLSLALPHQSIYKSQDVVQVNIPAESGDMGVLA 68

Query: 55  NHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAAR 114
           NHVP++  LKPG++ V E  G +++ FVS G  +V  +S + I + EA+P++   A A R
Sbjct: 69  NHVPSIEQLKPGLVEVVEESGAAKQFFVSGGFASVQPNSILSINSPEAYPLEDFSADAIR 128

Query: 115 DVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
             +++AQ   S   SE   AEA+I +EV E L
Sbjct: 129 AAIAEAQKVASGNGSEQDIAEAKIELEVLETL 160



 Score = 43.5 bits (101), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 4/81 (4%)

Query: 140 VEVAE----ALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSA 195
           VEV E    A + FVS G  +V  +S + I + EA+P++   A A R  +++AQ   S  
Sbjct: 82  VEVVEESGAAKQFFVSGGFASVQPNSILSINSPEAYPLEDFSADAIRAAIAEAQKVASGN 141

Query: 196 SSETAKAEAQIAVEVAEALVA 216
            SE   AEA+I +EV E L A
Sbjct: 142 GSEQDIAEAKIELEVLETLAA 162


>gi|340959402|gb|EGS20583.1| ATP synthase-like protein [Chaetomium thermophilum var.
           thermophilum DSM 1495]
          Length = 165

 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 55/140 (39%), Positives = 86/140 (61%), Gaps = 4/140 (2%)

Query: 12  LARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGV 67
           + RRGYA    D++  +L+  ++  YT+Q+V QV++P+ SG  G+L NHVP++  LKPGV
Sbjct: 22  IQRRGYAEAVSDKIKLSLSLPHQAIYTSQDVVQVNIPAESGEMGVLANHVPSIEQLKPGV 81

Query: 68  ITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSA 127
           + V E  G ++K F+S G   V   S + I A E +P++   A A R  +++AQ   S  
Sbjct: 82  VEVIEESGTTKKFFLSGGFAIVQPKSRLSINAVEGYPLEDFSAEAVRAQIAEAQKVASGN 141

Query: 128 SSETAKAEAQIAVEVAEALK 147
            +E   AEA+I +EV E+L+
Sbjct: 142 GTEQEIAEAKIELEVLESLQ 161


>gi|169595170|ref|XP_001791009.1| hypothetical protein SNOG_00319 [Phaeosphaeria nodorum SN15]
 gi|160701031|gb|EAT91814.2| hypothetical protein SNOG_00319 [Phaeosphaeria nodorum SN15]
          Length = 165

 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 91/143 (63%), Gaps = 4/143 (2%)

Query: 9   ATRLARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILK 64
           A  + RRGYA    D++  +LA  ++  Y +Q+V QV++P+ +G  G+L NHVP++  LK
Sbjct: 19  ARPIQRRGYAEVASDKIKLSLALPHQSIYKSQDVVQVNLPAETGDMGVLANHVPSIEQLK 78

Query: 65  PGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSEL 124
           PG++ + E +G S++ F+S G  TV  +S + I A E +P++   A A R+ +++AQ   
Sbjct: 79  PGLVEIIEEQGGSKQFFLSGGFATVQPNSVLSINAVEGYPLEDFSAEAVRNQIAEAQKIA 138

Query: 125 SSASSETAKAEAQIAVEVAEALK 147
           S + SE   AEA+I +EV E+L+
Sbjct: 139 SGSGSEADIAEAKIELEVLESLQ 161


>gi|2493049|sp|Q92196.1|ATPD_AGABI RecName: Full=ATP synthase subunit delta, mitochondrial; AltName:
           Full=F-ATPase delta subunit; Flags: Precursor
 gi|1666267|emb|CAB04785.1| ATP-synthase delta-subunit [Agaricus bisporus]
 gi|426197174|gb|EKV47101.1| ATP16 delta subunit of the central stalk of mitochondrial F1F0 ATP
           synthase [Agaricus bisporus var. bisporus H97]
          Length = 162

 Score =  103 bits (257), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 89/149 (59%), Gaps = 4/149 (2%)

Query: 2   AARLVTSATRLARRGYA---DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVP 58
           AAR  T+     RRGYA   D++  +LA  +K  +++Q+V QV++P+ SG  GIL +HVP
Sbjct: 10  AARRATTHVAYTRRGYAEISDKLKLSLALPHKAIFSSQDVVQVNIPAESGDMGILSSHVP 69

Query: 59  TLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLS 118
           ++  L+PGV+ V E  G SQK FVS G  TV+ ++ + I   EA P++     A R  L 
Sbjct: 70  SIEPLRPGVVEVVEDSG-SQKWFVSGGFATVHPNNRLTINVVEAAPLEDFSIEAIRANLQ 128

Query: 119 KAQSELSSASSETAKAEAQIAVEVAEALK 147
           +A    + + SE  K EAQI  EV EAL+
Sbjct: 129 EANKVAAGSGSEADKMEAQIEAEVYEALQ 157



 Score = 40.8 bits (94), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 41/78 (52%), Gaps = 3/78 (3%)

Query: 140 VEVAE---ALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS 196
           VEV E   + K FVS G  TV+ ++ + I   EA P++     A R  L +A    + + 
Sbjct: 79  VEVVEDSGSQKWFVSGGFATVHPNNRLTINVVEAAPLEDFSIEAIRANLQEANKVAAGSG 138

Query: 197 SETAKAEAQIAVEVAEAL 214
           SE  K EAQI  EV EAL
Sbjct: 139 SEADKMEAQIEAEVYEAL 156


>gi|449298646|gb|EMC94661.1| hypothetical protein BAUCODRAFT_111711 [Baudoinia compniacensis
           UAMH 10762]
          Length = 164

 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 60/152 (39%), Positives = 93/152 (61%), Gaps = 5/152 (3%)

Query: 1   MAARLVTSATR-LARRGYAD----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPN 55
           +A R  ++A R L +R YAD    ++  +LA  ++  Y +Q+V QV++P+ SG  GIL  
Sbjct: 9   VALRTRSTAVRTLQKRSYADVAPDKIKLSLALPHQAIYRSQDVVQVNIPAESGEMGILAQ 68

Query: 56  HVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARD 115
           HVP++  LKPG++ V E  G S++ F+S G  TV  +S + I A E +P+D   A A R+
Sbjct: 69  HVPSIEQLKPGLVEVIEEAGGSKQFFLSGGFATVQPNSVLSINAVEGYPLDDFSADAVRN 128

Query: 116 VLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
            +S+AQ     + SE   AEA+I +EV E+L+
Sbjct: 129 QISEAQKIAGGSGSEQDIAEARIELEVLESLQ 160



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 42/71 (59%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           + F+S G  TV  +S + I A E +P+D   A A R+ +S+AQ     + SE   AEA+I
Sbjct: 92  QFFLSGGFATVQPNSVLSINAVEGYPLDDFSADAVRNQISEAQKIAGGSGSEQDIAEARI 151

Query: 207 AVEVAEALVAA 217
            +EV E+L AA
Sbjct: 152 ELEVLESLQAA 162


>gi|134274665|emb|CAM82775.1| putative ATP synthase [Nidula niveotomentosa]
          Length = 179

 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 61/149 (40%), Positives = 87/149 (58%), Gaps = 4/149 (2%)

Query: 2   AARLVTSATRLARRGYA---DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVP 58
           AAR  T +  LA+RGYA   D++  +    +K  Y +Q+V QV++P+ SG  GIL NHVP
Sbjct: 27  AARRATGSFTLAKRGYAEVNDKLRLSFVLPHKAIYNSQDVVQVNIPAESGDMGILSNHVP 86

Query: 59  TLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLS 118
           ++  L+PGV+ V E  G +QK FVS G  TV+ ++ V I   EA P++     A R  L 
Sbjct: 87  SIEPLRPGVVEVLEGSG-TQKFFVSGGFATVHPNNKVTINVVEAAPLEDFSLEAVRANLQ 145

Query: 119 KAQSELSSASSETAKAEAQIAVEVAEALK 147
           +A    +   SE  K EA+I  +V EAL+
Sbjct: 146 EASKAAAGNGSEEEKLEARIEADVYEALQ 174


>gi|389741600|gb|EIM82788.1| epsilon subunit of F1F0-ATP synthase N-terminal domain-containing
           protein [Stereum hirsutum FP-91666 SS1]
          Length = 167

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/145 (41%), Positives = 91/145 (62%), Gaps = 4/145 (2%)

Query: 7   TSATR-LARRGYA---DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAI 62
           T ATR L RRGYA   D++  +L   ++  +++ +V QV++ + +G  GIL NHVP+L  
Sbjct: 17  TPATRALGRRGYAEVADKIKLSLVLPHQAIFSSTDVVQVNIAAATGDMGILANHVPSLEP 76

Query: 63  LKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQS 122
           L+PGV+ V ++   S+K FVS G  TV+ ++ + I A EA P++   + A R  L++AQ 
Sbjct: 77  LRPGVVEVLDSANSSKKWFVSGGFATVHPNNKLTINAVEAAPLEDFSSEAIRANLAEAQK 136

Query: 123 ELSSASSETAKAEAQIAVEVAEALK 147
            LS   SE  KAEA+I  +V EAL+
Sbjct: 137 VLSGNGSEEDKAEARIEADVYEALQ 161



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 41/68 (60%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVS G  TV+ ++ + I A EA P++   + A R  L++AQ  LS   SE  KAEA+I
Sbjct: 93  KWFVSGGFATVHPNNKLTINAVEAAPLEDFSSEAIRANLAEAQKVLSGNGSEEDKAEARI 152

Query: 207 AVEVAEAL 214
             +V EAL
Sbjct: 153 EADVYEAL 160


>gi|70990422|ref|XP_750060.1| ATP synthase delta chain, mitochondrial precursor [Aspergillus
           fumigatus Af293]
 gi|66847692|gb|EAL88022.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Aspergillus fumigatus Af293]
 gi|159130541|gb|EDP55654.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Aspergillus fumigatus A1163]
          Length = 165

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/152 (38%), Positives = 92/152 (60%), Gaps = 6/152 (3%)

Query: 2   AARLVTSATR--LARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPN 55
           A R   SA R  L RRGYA    D++  +LA  ++  + + +V QV++P+ SG  G+L N
Sbjct: 10  ALRARPSALRVPLQRRGYAEAVSDKIKLSLALPHQTIFKSADVVQVNIPAESGEMGVLAN 69

Query: 56  HVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARD 115
           HVP++  LKPG++ + E  G ++K F+S G   V  DS++ I A EA+P++   A A + 
Sbjct: 70  HVPSIEQLKPGLVEIVEESGANKKFFLSGGFAVVQPDSALSINAVEAYPLEDFSADAVKS 129

Query: 116 VLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
            +++AQ   + + SE   AEA+I +EV E L+
Sbjct: 130 QIAEAQKIANGSGSEQDIAEAKIELEVLETLQ 161



 Score = 43.5 bits (101), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 41/70 (58%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K F+S G   V  DS++ I A EA+P++   A A +  +++AQ   + + SE   AEA+I
Sbjct: 93  KFFLSGGFAVVQPDSALSINAVEAYPLEDFSADAVKSQIAEAQKIANGSGSEQDIAEAKI 152

Query: 207 AVEVAEALVA 216
            +EV E L A
Sbjct: 153 ELEVLETLQA 162


>gi|367050486|ref|XP_003655622.1| hypothetical protein THITE_2119499 [Thielavia terrestris NRRL 8126]
 gi|347002886|gb|AEO69286.1| hypothetical protein THITE_2119499 [Thielavia terrestris NRRL 8126]
          Length = 165

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/142 (39%), Positives = 86/142 (60%), Gaps = 4/142 (2%)

Query: 10  TRLARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKP 65
           T L RRGYA    D++  +L+  ++  Y +Q+V QV++P+ SG  GIL NHVP++  LKP
Sbjct: 20  TPLQRRGYAEAVSDKIKLSLSLPHQSIYRSQDVVQVNIPAESGDMGILANHVPSIEQLKP 79

Query: 66  GVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELS 125
           G + + E  G S+K F+S G   V   S++ I A E +P++   A A +  +++AQ   S
Sbjct: 80  GFVEIIEESGSSKKFFLSGGFAIVQPKSALSITAVEGYPLEDFSAEAVKAQIAEAQKVAS 139

Query: 126 SASSETAKAEAQIAVEVAEALK 147
              SE   AEA+I +EV E+L+
Sbjct: 140 GNGSEQDIAEAKIELEVLESLQ 161


>gi|398399178|ref|XP_003853046.1| hypothetical protein MYCGRDRAFT_104198 [Zymoseptoria tritici
           IPO323]
 gi|339472928|gb|EGP88022.1| hypothetical protein MYCGRDRAFT_104198 [Zymoseptoria tritici
           IPO323]
          Length = 169

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/138 (39%), Positives = 85/138 (61%), Gaps = 4/138 (2%)

Query: 14  RRGYAD----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVIT 69
           RRGYAD    ++  TLA  ++  Y +Q+V QV++P+ SG  G+L +HVP++  LKPG++ 
Sbjct: 28  RRGYADVASDKIQLTLALPHQAVYKSQDVVQVNIPAESGEMGVLASHVPSIEQLKPGLVE 87

Query: 70  VYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASS 129
           V E  G S++ F+S G  TV   S + I A E +P++   A A R+ +++AQ       S
Sbjct: 88  VIEENGGSKQFFLSGGFATVQPGSVLSINAVEGYPLEDFSADAVRNQIAEAQKIAQGGGS 147

Query: 130 ETAKAEAQIAVEVAEALK 147
           E   AEA+I +EV E+L+
Sbjct: 148 EQDVAEAKIELEVLESLQ 165


>gi|402224262|gb|EJU04325.1| ATP-synthase delta-subunit [Dacryopinax sp. DJM-731 SS1]
          Length = 163

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/159 (38%), Positives = 89/159 (55%), Gaps = 12/159 (7%)

Query: 1   MAARLVTSATR------LARRGYA------DQMDFTLASGNKVFYTNQNVKQVDVPSFSG 48
           MA RL   A        L RRGYA      D++  +L       ++++ V QV++P+ +G
Sbjct: 1   MAFRLAVRALPRRAMPVLGRRGYAEAVGAADKIKLSLVLPYSTIFSSEEVTQVNLPAVTG 60

Query: 49  AFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSL 108
             G+L NHV T+  L+PGV+ V E+ G S+K FVSSG  TV+ D+++ I   E  P++  
Sbjct: 61  DMGVLANHVATIEPLRPGVLEVIESVGQSKKWFVSSGLATVHPDNTMTINVIEGAPLEDF 120

Query: 109 DASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
            A A R  L++AQ   +   SE  K EA I VEV EAL+
Sbjct: 121 SAEAVRSNLAEAQRVAAGNGSEVEKVEAGIEVEVYEALQ 159



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 44/76 (57%)

Query: 142 VAEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAK 201
           V ++ K FVSSG  TV+ D+++ I   E  P++   A A R  L++AQ   +   SE  K
Sbjct: 86  VGQSKKWFVSSGLATVHPDNTMTINVIEGAPLEDFSAEAVRSNLAEAQRVAAGNGSEVEK 145

Query: 202 AEAQIAVEVAEALVAA 217
            EA I VEV EAL AA
Sbjct: 146 VEAGIEVEVYEALQAA 161


>gi|430812823|emb|CCJ29758.1| unnamed protein product [Pneumocystis jirovecii]
          Length = 164

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/142 (40%), Positives = 81/142 (57%), Gaps = 5/142 (3%)

Query: 11  RLARRGYA-----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKP 65
           R + RGYA     D++  T +  + V Y  QNV QV++P+ SG  GIL  HVP++  L+P
Sbjct: 19  RFSSRGYAKEVSTDKICLTFSLPHNVLYNAQNVTQVNIPATSGNMGILALHVPSIEQLRP 78

Query: 66  GVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELS 125
           G++ V E  G+S K FVS G   V   SS+ I A EA+ +D        + L +AQ  +S
Sbjct: 79  GIVDVIEENGISNKFFVSGGFAIVQPGSSLCINAIEAYSLDDFSLETVSEKLQEAQKIVS 138

Query: 126 SASSETAKAEAQIAVEVAEALK 147
              SE   AEA+I +EV E+L+
Sbjct: 139 GNGSEEDIAEAKIQIEVLESLR 160



 Score = 40.8 bits (94), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 36/68 (52%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVS G   V   SS+ I A EA+ +D        + L +AQ  +S   SE   AEA+I
Sbjct: 92  KFFVSGGFAIVQPGSSLCINAIEAYSLDDFSLETVSEKLQEAQKIVSGNGSEEDIAEAKI 151

Query: 207 AVEVAEAL 214
            +EV E+L
Sbjct: 152 QIEVLESL 159


>gi|392570392|gb|EIW63565.1| epsilon subunit of F1F0-ATP synthase N-terminal domain-containing
           protein [Trametes versicolor FP-101664 SS1]
          Length = 163

 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/156 (41%), Positives = 91/156 (58%), Gaps = 10/156 (6%)

Query: 2   AARLVTSATR-------LARRGYA---DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFG 51
           A RLVTSATR       L RRGYA   D++  +L   ++  +T+ +V QV++ + SG  G
Sbjct: 3   ALRLVTSATRRAPRAFALGRRGYAEAADKIALSLVLPHQAIFTSADVVQVNLAAASGDMG 62

Query: 52  ILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDAS 111
           IL NH PT+  L+PGV+ V E    S+K FVS G  TV+ ++ + I A EA P+++  A 
Sbjct: 63  ILANHAPTIEPLRPGVVEVIEGSNQSKKWFVSGGFATVHPNNKLTINAVEAAPLEAFSAE 122

Query: 112 AARDVLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
           A R  L +A    +   SE  K EA+I  +V EAL+
Sbjct: 123 AVRANLQEALKVAAGNGSEEDKVEARIEADVYEALQ 158


>gi|402079057|gb|EJT74322.1| ATP synthase subunit delta [Gaeumannomyces graminis var. tritici
           R3-111a-1]
          Length = 165

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/153 (38%), Positives = 92/153 (60%), Gaps = 6/153 (3%)

Query: 1   MAARLVTSATR--LARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILP 54
           +A R   SA R  L RRGYA    D++  +L+  ++  Y +Q+V QV++P+ SG  G+L 
Sbjct: 9   VALRARPSAVRVPLQRRGYAEAVSDKIKLSLSLPHQSIYKSQDVVQVNIPAESGEMGVLA 68

Query: 55  NHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAAR 114
           NHVP++  LKPG++ V E  G S++ F+S G   V  +S + I A E  P++   A A +
Sbjct: 69  NHVPSMEQLKPGLVEVIEESGGSKQFFLSGGFAIVQPNSHMSINAVEGFPLEDFSADAVK 128

Query: 115 DVLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
             +++AQ   S + SE   AEA+I +EV E+L+
Sbjct: 129 AQIAEAQKVASGSGSELDIAEAKIELEVLESLQ 161


>gi|156051296|ref|XP_001591609.1| ATP synthase delta chain, mitochondrial precursor [Sclerotinia
           sclerotiorum 1980]
 gi|154704833|gb|EDO04572.1| ATP synthase delta chain, mitochondrial precursor [Sclerotinia
           sclerotiorum 1980 UF-70]
          Length = 165

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 55/138 (39%), Positives = 84/138 (60%), Gaps = 4/138 (2%)

Query: 14  RRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVIT 69
           RRGYA    D++  +LA  ++  Y +Q+V QV++P+ SG  GIL NHVP++  LKPG++ 
Sbjct: 24  RRGYAEAVADKIKLSLALPHQSVYRSQDVVQVNIPAESGEMGILANHVPSIEQLKPGLVE 83

Query: 70  VYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASS 129
           V E  G S++ F+S G   V  +SS+ I A E  P++     A R  +++AQ  +  + S
Sbjct: 84  VIEESGGSKQFFLSGGFAVVQPNSSLSINAVEGFPLEDFSVEAVRSQIAEAQKIVGGSGS 143

Query: 130 ETAKAEAQIAVEVAEALK 147
           E   AEA+I +EV E L+
Sbjct: 144 EQDIAEAKIELEVLETLQ 161


>gi|336258868|ref|XP_003344240.1| hypothetical protein SMAC_12083 [Sordaria macrospora k-hell]
 gi|380091887|emb|CCC10616.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 173

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/167 (34%), Positives = 96/167 (57%), Gaps = 10/167 (5%)

Query: 2   AARLVTSATR--LARRGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPT 59
           A R+ ++A R  L RRGYA+ +  +L+  ++  Y +Q+V QV++P+ SG  G+L NHVP+
Sbjct: 10  ALRVRSTAVRAPLQRRGYAEAIKLSLSLPHQAIYKSQDVVQVNIPAVSGEMGVLANHVPS 69

Query: 60  LAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSK 119
           +  LKPG++ V E  G +++ F+S G   V   S + I A E + ++   A A R  +++
Sbjct: 70  IEQLKPGLVEVIEESGSNKQYFLSGGFAVVQPGSKLSINAVEGYALEDFSAEAVRAQIAE 129

Query: 120 AQSELSSASSETAKAEAQIAVEVAEALKIFVSSGTITVNDDSSVQII 166
           AQ  +S   S+   AEAQ+ +E        VSSG   V    +V+++
Sbjct: 130 AQKIVSGGGSQQDIAEAQVELE--------VSSGDRAVGCGCAVRVV 168


>gi|134108712|ref|XP_777009.1| hypothetical protein CNBB5350 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259692|gb|EAL22362.1| hypothetical protein CNBB5350 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 168

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 57/146 (39%), Positives = 90/146 (61%), Gaps = 6/146 (4%)

Query: 8   SATRLARRGYAD-----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAI 62
           SA R+ARRGYA+     ++  +L   ++  Y++  V QV++P+ +G  GIL NHVP++  
Sbjct: 18  SALRIARRGYAEAATDGKLQLSLVLPHQSLYSSSGVIQVNIPAATGDMGILANHVPSVEA 77

Query: 63  LKPGVITVYETEG-VSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQ 121
           L+PGVI V E  G   +K FVS+G  TV+ ++++ I A EA+ +D     + +  L+ A 
Sbjct: 78  LRPGVIEVIEENGQQGKKWFVSAGFATVHGNNALTINAVEAYSLDKFSPESIKSALADAN 137

Query: 122 SELSSASSETAKAEAQIAVEVAEALK 147
             L S + E+ KAEA+I V+V E L+
Sbjct: 138 RVLGSNAPESEKAEARIEVDVYEGLQ 163



 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 44/73 (60%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVS+G  TV+ ++++ I A EA+ +D     + +  L+ A   L S + E+ KAEA+I
Sbjct: 95  KWFVSAGFATVHGNNALTINAVEAYSLDKFSPESIKSALADANRVLGSNAPESEKAEARI 154

Query: 207 AVEVAEALVAAAS 219
            V+V E L AA S
Sbjct: 155 EVDVYEGLQAALS 167


>gi|358377900|gb|EHK15583.1| hypothetical protein TRIVIDRAFT_38411 [Trichoderma virens Gv29-8]
          Length = 160

 Score =  100 bits (249), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 90/145 (62%), Gaps = 6/145 (4%)

Query: 8   SATRLA--RRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLA 61
           +A R+A  RRGYA    D++  +LA  ++  Y +Q+V QV++P+ SG  G+L NHVP++ 
Sbjct: 16  TAMRVAIQRRGYAEAVPDKIKLSLALPHQSIYKSQDVVQVNIPAESGEMGVLANHVPSIE 75

Query: 62  ILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQ 121
            LKPG++ V E  G +++ F+S G  TV  +S + I A EA+P++   A A R  +++AQ
Sbjct: 76  QLKPGLVEVVEESGPAKQFFLSGGFATVQPNSVLSINAPEAYPLEDFSAEAVRAGIAEAQ 135

Query: 122 SELSSASSETAKAEAQIAVEVAEAL 146
              S   SE   AEA+I +EV  A+
Sbjct: 136 KVASGNGSEQDIAEAKIELEVRGAV 160



 Score = 42.4 bits (98), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 4/79 (5%)

Query: 140 VEVAE----ALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSA 195
           VEV E    A + F+S G  TV  +S + I A EA+P++   A A R  +++AQ   S  
Sbjct: 82  VEVVEESGPAKQFFLSGGFATVQPNSVLSINAPEAYPLEDFSAEAVRAGIAEAQKVASGN 141

Query: 196 SSETAKAEAQIAVEVAEAL 214
            SE   AEA+I +EV  A+
Sbjct: 142 GSEQDIAEAKIELEVRGAV 160


>gi|452846818|gb|EME48750.1| hypothetical protein DOTSEDRAFT_67702 [Dothistroma septosporum
           NZE10]
          Length = 167

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 56/140 (40%), Positives = 86/140 (61%), Gaps = 4/140 (2%)

Query: 12  LARRGYAD----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGV 67
           L +R YAD    ++  TLA  ++  Y +Q+V QV++P+ SG  G+L +HVP++  LKPG+
Sbjct: 24  LLKRTYADVAPDKIQLTLALPHQAIYKSQDVVQVNIPAESGEMGVLASHVPSIEQLKPGL 83

Query: 68  ITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSA 127
           + V E  G S++ F+S G  TV   S + I A E +P++   A A R+ +S+AQ   S  
Sbjct: 84  VEVIEESGGSKQFFLSGGFATVQPGSILSINAVEGYPLEDFSADAVRNQISEAQKIASGG 143

Query: 128 SSETAKAEAQIAVEVAEALK 147
            SE   AEA+I +EV E+L+
Sbjct: 144 GSEQDVAEAKIELEVLESLQ 163


>gi|164429048|ref|XP_957271.2| ATP synthase delta chain, mitochondrial precursor [Neurospora
           crassa OR74A]
 gi|51704300|sp|P56525.2|ATPD_NEUCR RecName: Full=ATP synthase subunit delta, mitochondrial; AltName:
           Full=F-ATPase delta subunit; Flags: Precursor
 gi|157072387|gb|EAA28035.2| ATP synthase delta chain, mitochondrial precursor [Neurospora
           crassa OR74A]
 gi|336469929|gb|EGO58091.1| ATP synthase subunit delta, mitochondrial [Neurospora tetrasperma
           FGSC 2508]
 gi|350290386|gb|EGZ71600.1| ATP synthase delta chain mitochondrial precursor [Neurospora
           tetrasperma FGSC 2509]
          Length = 165

 Score =  100 bits (248), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 56/152 (36%), Positives = 91/152 (59%), Gaps = 6/152 (3%)

Query: 2   AARLVTSATR--LARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPN 55
           A R+  +A R  L RRGYA    D++  +L+  ++  Y +Q+V QV++P+ SG  G+L N
Sbjct: 10  ALRVRPTAVRAPLQRRGYAEAVADKIKLSLSLPHQAIYKSQDVVQVNIPAVSGEMGVLAN 69

Query: 56  HVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARD 115
           HVP++  LKPG++ V E  G +++ F+S G   V   S + I A E + ++   A A R 
Sbjct: 70  HVPSIEQLKPGLVEVIEESGSNKQYFLSGGFAVVQPGSKLSINAVEGYALEDFSAEAVRA 129

Query: 116 VLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
            +++AQ  +S   S+   AEAQ+ +EV E+L+
Sbjct: 130 QIAEAQKIVSGGGSQQDIAEAQVELEVLESLQ 161


>gi|390602282|gb|EIN11675.1| epsilon subunit of F1F0-ATP synthase N-terminal domain-containing
           protein [Punctularia strigosozonata HHB-11173 SS5]
          Length = 162

 Score =  100 bits (248), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 58/157 (36%), Positives = 94/157 (59%), Gaps = 11/157 (7%)

Query: 2   AARLVTSATRLA-------RRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAF 50
           A R +++A R A       RRGYA    +++  +LA  ++  YT+ +V QV++ + +G  
Sbjct: 3   ALRFLSAAARRAPATLAAQRRGYAEAVSNKLKLSLALPHQAIYTSTDVTQVNLSAATGDM 62

Query: 51  GILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDA 110
           G+L NHVPT+  L+PG++ V E+ G S+K FVS G   V+ ++ + I A EA P++    
Sbjct: 63  GVLANHVPTVEALRPGIVEVVESAGSSKKWFVSGGFAIVHPNNKMTINAVEAAPIEDFSL 122

Query: 111 SAARDVLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
            A R  L++A   L+ + SE  KAEA+I  +V EA++
Sbjct: 123 EAVRANLAEANKVLAGSGSEEDKAEARIEADVYEAIQ 159



 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 39/68 (57%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVS G   V+ ++ + I A EA P++     A R  L++A   L+ + SE  KAEA+I
Sbjct: 91  KWFVSGGFAIVHPNNKMTINAVEAAPIEDFSLEAVRANLAEANKVLAGSGSEEDKAEARI 150

Query: 207 AVEVAEAL 214
             +V EA+
Sbjct: 151 EADVYEAI 158


>gi|145350163|ref|XP_001419486.1| F-ATPase family transporter: protons (mitochondrial) [Ostreococcus
           lucimarinus CCE9901]
 gi|144579718|gb|ABO97779.1| F-ATPase family transporter: protons (mitochondrial) [Ostreococcus
           lucimarinus CCE9901]
          Length = 170

 Score =  100 bits (248), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 52/132 (39%), Positives = 82/132 (62%)

Query: 15  RGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETE 74
           +G AD++       ++V +  + V  V VP+ +G FGILP HVPT++ L+PGV++V+  +
Sbjct: 32  KGTADKLKLNFYLPHEVAHDEEEVDMVLVPATTGDFGILPGHVPTVSQLRPGVVSVHLND 91

Query: 75  GVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKA 134
              +K FVSSG   V+ DS+  I A EA PV+ LD  A R  L++ Q++ ++A  +  KA
Sbjct: 92  KDVKKYFVSSGFAFVHADSTADICAIEAVPVEQLDGDAVRKGLAEHQAKFTNAKDDFEKA 151

Query: 135 EAQIAVEVAEAL 146
            AQI ++V  A+
Sbjct: 152 NAQIGIDVCNAM 163



 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/71 (45%), Positives = 45/71 (63%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG   V+ DS+  I A EA PV+ LD  A R  L++ Q++ ++A  +  KA AQI
Sbjct: 96  KYFVSSGFAFVHADSTADICAIEAVPVEQLDGDAVRKGLAEHQAKFTNAKDDFEKANAQI 155

Query: 207 AVEVAEALVAA 217
            ++V  A+VAA
Sbjct: 156 GIDVCNAMVAA 166


>gi|212539488|ref|XP_002149899.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Talaromyces marneffei ATCC 18224]
 gi|210067198|gb|EEA21290.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Talaromyces marneffei ATCC 18224]
          Length = 165

 Score =  100 bits (248), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 58/155 (37%), Positives = 93/155 (60%), Gaps = 6/155 (3%)

Query: 2   AARLVTSATRL--ARRGYAD----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPN 55
           A R+  +A R+   RR YAD    ++  +LA  ++  + + +V QV++P+ SG  GIL N
Sbjct: 10  ALRVRPTAIRIPAGRRTYADAVADKIKLSLAMPHQNLFKSTDVVQVNIPAESGEMGILAN 69

Query: 56  HVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARD 115
           HVP++  LKPG++ V E  G +++ F+S G   V  DS + I A EA+P++   A A R 
Sbjct: 70  HVPSIEQLKPGLVEVIEESGSTKQFFLSGGFAVVQPDSRLSINAVEAYPLEDFSADAIRS 129

Query: 116 VLSKAQSELSSASSETAKAEAQIAVEVAEALKIFV 150
            +++AQ   + + SE   AEA+I +EV E L++ V
Sbjct: 130 QIAEAQKIANGSGSEQDIAEAKIELEVLETLQLHV 164



 Score = 43.1 bits (100), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 39/68 (57%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           + F+S G   V  DS + I A EA+P++   A A R  +++AQ   + + SE   AEA+I
Sbjct: 93  QFFLSGGFAVVQPDSRLSINAVEAYPLEDFSADAIRSQIAEAQKIANGSGSEQDIAEAKI 152

Query: 207 AVEVAEAL 214
            +EV E L
Sbjct: 153 ELEVLETL 160


>gi|347836498|emb|CCD51070.1| similar to mitochondrial ATP synthase delta chain [Botryotinia
           fuckeliana]
          Length = 165

 Score =  100 bits (248), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 56/142 (39%), Positives = 86/142 (60%), Gaps = 4/142 (2%)

Query: 10  TRLARRGYAD----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKP 65
           T + RRGYA+    ++  +LA  ++  Y +Q+V QV++P+ SG  GIL NHVP++  LKP
Sbjct: 20  TPVLRRGYAEAVAEKIKLSLALPHQSVYRSQDVVQVNIPAESGEMGILANHVPSIEQLKP 79

Query: 66  GVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELS 125
           G++ V E  G S++ F+S G   V  +SS+ I A E  P++   A A R  +++AQ    
Sbjct: 80  GLVEVIEESGGSKQFFLSGGFAVVQPNSSLSINAVEGFPLEDFSADAVRSQIAEAQKIAG 139

Query: 126 SASSETAKAEAQIAVEVAEALK 147
            + SE   AEA+I +EV E L+
Sbjct: 140 GSGSEQDIAEAKIELEVLETLQ 161


>gi|340518487|gb|EGR48728.1| ATP synthase delta chain [Trichoderma reesei QM6a]
          Length = 156

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 57/148 (38%), Positives = 91/148 (61%), Gaps = 6/148 (4%)

Query: 1   MAARLVTSATRLA--RRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILP 54
           +A R   +A R+A  RRGYA    D++  +LA  ++  Y +Q+V QV++P+ SG  G+L 
Sbjct: 9   VALRARPTAMRMAIQRRGYAEAVPDKIKLSLALPHQSIYKSQDVVQVNIPAESGEMGVLA 68

Query: 55  NHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAAR 114
           NHVP++  LKPG++ V E  G +++ F+S G  TV  +S + I + EA+P++   A A R
Sbjct: 69  NHVPSIEQLKPGLVEVVEENGPAKQFFLSGGFATVQPNSVLSINSPEAYPLEDFSADAIR 128

Query: 115 DVLSKAQSELSSASSETAKAEAQIAVEV 142
             +++AQ   +   SE   AEA+I +EV
Sbjct: 129 AGIAEAQKVANGNGSEQDIAEAKIELEV 156



 Score = 39.3 bits (90), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 4/75 (5%)

Query: 140 VEVAE----ALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSA 195
           VEV E    A + F+S G  TV  +S + I + EA+P++   A A R  +++AQ   +  
Sbjct: 82  VEVVEENGPAKQFFLSGGFATVQPNSVLSINSPEAYPLEDFSADAIRAGIAEAQKVANGN 141

Query: 196 SSETAKAEAQIAVEV 210
            SE   AEA+I +EV
Sbjct: 142 GSEQDIAEAKIELEV 156


>gi|350535617|ref|NP_001232204.1| putative ATP synthase H+ transporting mitochondrial F1 complex
           delta subunit [Taeniopygia guttata]
 gi|197127890|gb|ACH44388.1| putative ATP synthase H+ transporting mitochondrial F1 complex
           delta subunit [Taeniopygia guttata]
          Length = 143

 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 53/105 (50%), Positives = 68/105 (64%), Gaps = 15/105 (14%)

Query: 1   MAARLVTSAT-RLAR--------RGYADQ------MDFTLASGNKVFYTNQNVKQVDVPS 45
           MAA L      RLAR        RGYAD       M FT AS  +VFY   NVKQVDVP+
Sbjct: 1   MAAMLCARRLLRLARSSPPLPPARGYADPAGGPAAMAFTFASPTQVFYNGANVKQVDVPT 60

Query: 46  FSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVN 90
            +G+FGIL +HVPTL +L+PGV+TV+  +G + K FVSSG+++V+
Sbjct: 61  LTGSFGILASHVPTLQVLRPGVVTVHAEDGTATKYFVSSGSVSVH 105


>gi|241252456|ref|XP_002403674.1| ATP synthase H+ transporting, F1 complex, delta subunit precursor,
           putative [Ixodes scapularis]
 gi|215496543|gb|EEC06183.1| ATP synthase H+ transporting, F1 complex, delta subunit precursor,
           putative [Ixodes scapularis]
          Length = 168

 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 69/166 (41%), Positives = 93/166 (56%), Gaps = 33/166 (19%)

Query: 2   AARLVTSATRL------ARRGYADQ-MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILP 54
           A R V   +RL        R YAD  M  T AS  + F+   +VKQVDVPS+SG FGILP
Sbjct: 10  ACRFVVPKSRLLASQSVQARTYADGGMPLTFASPAETFFDKVDVKQVDVPSYSGNFGILP 69

Query: 55  NHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDAS--- 111
           +HVP LA++KPGV+TV+  EG +Q+ F   GT          + + + H    LD S   
Sbjct: 70  HHVPALAVIKPGVVTVFTNEGDAQRFF---GT---------PLQSSQKHASHRLDGSSMM 117

Query: 112 -----------AARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
                      A R+ L+KAQ  +++A+++ A+AEAQI VEV EAL
Sbjct: 118 SGSGFGATTFTACREGLAKAQQAVTAAATDEARAEAQIEVEVHEAL 163


>gi|238483405|ref|XP_002372941.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Aspergillus flavus NRRL3357]
 gi|317139836|ref|XP_003189206.1| ATP synthase subunit delta [Aspergillus oryzae RIB40]
 gi|220700991|gb|EED57329.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Aspergillus flavus NRRL3357]
          Length = 165

 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 58/152 (38%), Positives = 89/152 (58%), Gaps = 6/152 (3%)

Query: 2   AARLVTSATR--LARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPN 55
           A R   SA R  L RRGYA    D++  +LA  ++  + +  V QV++P+ SG  G+L N
Sbjct: 10  ALRARPSAFRAPLQRRGYAEAVNDKIKLSLALPHQTIFKSTGVVQVNIPAESGEMGVLAN 69

Query: 56  HVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARD 115
           HVP++  LKPG++ V E  G ++K F+S G   V  DS + I A E  P++   + A ++
Sbjct: 70  HVPSIEQLKPGLVEVVEEGGATKKFFLSGGFAVVQPDSQLSINAVEGFPLEDFSSDAVKN 129

Query: 116 VLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
            +++AQ   S + SE   AEA+I +EV E L+
Sbjct: 130 QIAEAQKIASGSGSEQDIAEAKIELEVLETLQ 161


>gi|302417332|ref|XP_003006497.1| ATP synthase delta chain [Verticillium albo-atrum VaMs.102]
 gi|261354099|gb|EEY16527.1| ATP synthase delta chain [Verticillium albo-atrum VaMs.102]
          Length = 165

 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 56/140 (40%), Positives = 85/140 (60%), Gaps = 4/140 (2%)

Query: 12  LARRGYAD----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGV 67
           L RR YAD    ++  +L+  ++  Y +Q+V QV++P+ SG  G+L NHVP +  LKPG+
Sbjct: 22  LQRRTYADAVPDKIKLSLSLPHQPIYKSQDVVQVNIPAESGEMGVLANHVPCIEQLKPGL 81

Query: 68  ITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSA 127
           I V E  G S++ F+S G  TV   S + I A E +P++   A A R  +++AQ   S +
Sbjct: 82  IEVIEESGGSKQFFLSGGFATVQPGSLLSINAVEGYPLEDFSAEAVRTQIAEAQKVASGS 141

Query: 128 SSETAKAEAQIAVEVAEALK 147
            SE   AEA+I +EV E+L+
Sbjct: 142 GSEQDIAEAKIELEVLESLQ 161


>gi|119497145|ref|XP_001265337.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Neosartorya fischeri NRRL 181]
 gi|119413499|gb|EAW23440.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Neosartorya fischeri NRRL 181]
          Length = 165

 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 57/152 (37%), Positives = 90/152 (59%), Gaps = 6/152 (3%)

Query: 2   AARLVTSATR--LARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPN 55
           A R   SA R  L RRGYA    D++  +LA  ++  + +  V QV++P+ SG  G+L N
Sbjct: 10  ALRARPSALRVPLQRRGYAEAVSDKIKLSLALPHQTIFKSAGVVQVNIPAESGEMGVLAN 69

Query: 56  HVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARD 115
           HVP++  LKPG++ + E  G ++K F+S G   V  DS++ I A EA+P++   A A + 
Sbjct: 70  HVPSIEQLKPGLVEIVEEGGANKKFFLSGGFAVVQPDSALSINAVEAYPLEDFSADAVKS 129

Query: 116 VLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
            +++ Q   + + SE   AEA+I +EV E L+
Sbjct: 130 QIAEVQKIANGSGSEQDIAEAKIELEVLETLQ 161



 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 40/70 (57%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K F+S G   V  DS++ I A EA+P++   A A +  +++ Q   + + SE   AEA+I
Sbjct: 93  KFFLSGGFAVVQPDSALSINAVEAYPLEDFSADAVKSQIAEVQKIANGSGSEQDIAEAKI 152

Query: 207 AVEVAEALVA 216
            +EV E L A
Sbjct: 153 ELEVLETLQA 162


>gi|384493065|gb|EIE83556.1| hypothetical protein RO3G_08261 [Rhizopus delemar RA 99-880]
          Length = 163

 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/152 (40%), Positives = 88/152 (57%), Gaps = 8/152 (5%)

Query: 3   ARLVTSATRLARRGYA-------DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPN 55
           AR+     RLAR  YA       D +  T    +K  Y    V+QV++ + SG  GIL N
Sbjct: 8   ARVAVKPARLAR-FYASEAPASSDALRLTFVVPHKSIYKAATVQQVNLAATSGDMGILAN 66

Query: 56  HVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARD 115
           HVP++  L PG+I V E+  +++K FVS G  T+N DS++ I A EA P++ L     + 
Sbjct: 67  HVPSIEQLNPGIIEVIESAEITKKFFVSGGFATINPDSTLNINAVEASPLEELSLERVQA 126

Query: 116 VLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
            L++AQ   +SASS+  KA A+I VEV EAL+
Sbjct: 127 GLAEAQRNAASASSDKEKAVAKIEVEVYEALQ 158



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 43/68 (63%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVS G  T+N DS++ I A EA P++ L     +  L++AQ   +SASS+  KA A+I
Sbjct: 90  KFFVSGGFATINPDSTLNINAVEASPLEELSLERVQAGLAEAQRNAASASSDKEKAVAKI 149

Query: 207 AVEVAEAL 214
            VEV EAL
Sbjct: 150 EVEVYEAL 157


>gi|395333158|gb|EJF65536.1| epsilon subunit of F1F0-ATP synthase N-terminal domain-containing
           protein [Dichomitus squalens LYAD-421 SS1]
          Length = 163

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/156 (39%), Positives = 89/156 (57%), Gaps = 10/156 (6%)

Query: 2   AARLVTSATR-------LARRGYA---DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFG 51
           A RLVTSA R       L RRGYA   D++  +L   ++  +T+ +V QV++ + +G  G
Sbjct: 3   ALRLVTSAARRAPRTFALGRRGYAEAADKISLSLVLPHQAIFTSADVVQVNLAAATGDMG 62

Query: 52  ILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDAS 111
           IL NH PT+  L+PGV+ V E    S+K FVS G  TV+ ++ + I A EA P+D+    
Sbjct: 63  ILANHAPTIEPLRPGVVEVIEGGNTSKKWFVSGGFATVHPNNKLTINAVEAAPLDAFSPE 122

Query: 112 AARDVLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
           A R  L +A    +   SE  K EA+I  +V EAL+
Sbjct: 123 AVRANLQEALKVAAGNGSEEDKVEARIEADVYEALQ 158



 Score = 41.6 bits (96), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 39/73 (53%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVS G  TV+ ++ + I A EA P+D+    A R  L +A    +   SE  K EA+I
Sbjct: 90  KWFVSGGFATVHPNNKLTINAVEAAPLDAFSPEAVRANLQEALKVAAGNGSEEDKVEARI 149

Query: 207 AVEVAEALVAAAS 219
             +V EAL  A S
Sbjct: 150 EADVYEALQHALS 162


>gi|164660658|ref|XP_001731452.1| hypothetical protein MGL_1635 [Malassezia globosa CBS 7966]
 gi|159105352|gb|EDP44238.1| hypothetical protein MGL_1635 [Malassezia globosa CBS 7966]
          Length = 169

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/139 (39%), Positives = 80/139 (57%), Gaps = 4/139 (2%)

Query: 13  ARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVI 68
           ARRGYA    D++  +    +   Y  Q V QV+VP+ SG  GIL  HVPT+  ++PGV+
Sbjct: 25  ARRGYAEAVSDKLKLSFVLPHSALYNAQEVTQVNVPAISGDLGILSAHVPTVEQIRPGVL 84

Query: 69  TVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS 128
            V E+ G S+K FVSSG  T++ D+ + +   EA+ +D     + R  L++AQ   S   
Sbjct: 85  EVIESSGTSKKFFVSSGFATIHPDNHLTVNTIEAYTLDKFSQESVRQGLAEAQRVASGNG 144

Query: 129 SETAKAEAQIAVEVAEALK 147
           S   KA A+I VEV  A++
Sbjct: 145 SPEEKAAAEIEVEVFSAIQ 163



 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 40/73 (54%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG  T++ D+ + +   EA+ +D     + R  L++AQ   S   S   KA A+I
Sbjct: 95  KFFVSSGFATIHPDNHLTVNTIEAYTLDKFSQESVRQGLAEAQRVASGNGSPEEKAAAEI 154

Query: 207 AVEVAEALVAAAS 219
            VEV  A+ AA S
Sbjct: 155 EVEVFSAIQAALS 167


>gi|313227856|emb|CBY23005.1| unnamed protein product [Oikopleura dioica]
          Length = 144

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/117 (45%), Positives = 74/117 (63%), Gaps = 6/117 (5%)

Query: 7   TSATRLARRGYAD----QMDFTLASGNKVFYT-NQNVKQVDVPSFSGAFGILPNHVPTLA 61
           T  +++A R  A+     M F+ AS ++ FYT +  +KQVD+P+ +G  G+LP HVPT  
Sbjct: 6   TRVSKVALRSAAEIPEGAMAFSFASPHEEFYTADITIKQVDIPTTTGTIGVLPEHVPTFG 65

Query: 62  ILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLS 118
            L PGV+TV    G S K F+SSG+ TVN DSS+ +IAEEA P+   D  AA+  L+
Sbjct: 66  TLAPGVMTVMAESG-SSKYFISSGSYTVNPDSSISVIAEEAGPLADFDKDAAQQALN 121



 Score = 45.1 bits (105), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 9/70 (12%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K F+SSG+ TVN DSS+ +IAEEA P+   D  AA+  L+            T+  E +I
Sbjct: 82  KYFISSGSYTVNPDSSISVIAEEAGPLADFDKDAAQQALNAVN---------TSTPEGEI 132

Query: 207 AVEVAEALVA 216
              V   LVA
Sbjct: 133 EAAVLSELVA 142


>gi|259489503|tpe|CBF89828.1| TPA: ATP synthase delta chain, mitochondrial precursor, putative
           (AFU_orthologue; AFUA_1G03100) [Aspergillus nidulans
           FGSC A4]
          Length = 166

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 85/151 (56%), Gaps = 4/151 (2%)

Query: 1   MAARLVTSATRLARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNH 56
           + AR       L RRGYA    D++  +L   ++  + + +V QV++P+ SG  G+L NH
Sbjct: 12  LRARPAAFRVPLQRRGYAEAVNDKIKLSLVLPHQTIFRSTDVVQVNIPAESGEMGVLANH 71

Query: 57  VPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDV 116
           VP++  LKPG++ + E  G S+K F+S G   V  DS + I A E  P++   A   R  
Sbjct: 72  VPSIEQLKPGLVEIVEEGGASKKFFLSGGFAVVQPDSQLSINAVEGFPLEDFSAENVRAQ 131

Query: 117 LSKAQSELSSASSETAKAEAQIAVEVAEALK 147
           L++AQ   S   SE   AEA+I +EV E+L+
Sbjct: 132 LAEAQKIASGNGSEQDIAEAKIEIEVLESLQ 162



 Score = 43.1 bits (100), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 37/70 (52%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K F+S G   V  DS + I A E  P++   A   R  L++AQ   S   SE   AEA+I
Sbjct: 94  KFFLSGGFAVVQPDSQLSINAVEGFPLEDFSAENVRAQLAEAQKIASGNGSEQDIAEAKI 153

Query: 207 AVEVAEALVA 216
            +EV E+L A
Sbjct: 154 EIEVLESLQA 163


>gi|121703117|ref|XP_001269823.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Aspergillus clavatus NRRL 1]
 gi|119397966|gb|EAW08397.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Aspergillus clavatus NRRL 1]
          Length = 165

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/152 (37%), Positives = 88/152 (57%), Gaps = 6/152 (3%)

Query: 2   AARLVTSATR--LARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPN 55
           A R   SA R    RRGYA    D++  +LA  ++  + +  V QV++P+ SG  G+L N
Sbjct: 10  ALRARPSAFRAPFQRRGYAEAVPDKLKLSLALPHQTIFKSTGVVQVNIPAESGEMGVLAN 69

Query: 56  HVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARD 115
           HVP++  LKPG++ + E  G ++K F+S G   V  DS++ I A EA P++   A A + 
Sbjct: 70  HVPSIEQLKPGLVEIVEEGGANKKFFLSGGFAVVQPDSTLSINAVEAFPLEDFSADAVKS 129

Query: 116 VLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
            +++ Q   S + SE   AEA+I +EV E L+
Sbjct: 130 QIAEVQKIASGSGSEQDIAEAKIELEVLETLQ 161



 Score = 42.7 bits (99), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 39/70 (55%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K F+S G   V  DS++ I A EA P++   A A +  +++ Q   S + SE   AEA+I
Sbjct: 93  KFFLSGGFAVVQPDSTLSINAVEAFPLEDFSADAVKSQIAEVQKIASGSGSEQDIAEAKI 152

Query: 207 AVEVAEALVA 216
            +EV E L A
Sbjct: 153 ELEVLETLQA 162


>gi|346978672|gb|EGY22124.1| ATP synthase delta chain [Verticillium dahliae VdLs.17]
          Length = 165

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/140 (39%), Positives = 85/140 (60%), Gaps = 4/140 (2%)

Query: 12  LARRGYAD----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGV 67
           L RR YAD    ++  +L+  ++  Y +Q+V QV++P+ SG  G+L NHVP +  LKPG+
Sbjct: 22  LQRRTYADAVPDKIKLSLSLPHQPIYKSQDVVQVNIPAESGEMGVLANHVPCIEQLKPGL 81

Query: 68  ITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSA 127
           I V E  G S++ F+S G  TV   S + I A E +P++   A A R  +++AQ   + +
Sbjct: 82  IEVIEESGGSKQFFLSGGFATVQPGSLLSINAVEGYPLEDFSAEAVRTQIAEAQKVANGS 141

Query: 128 SSETAKAEAQIAVEVAEALK 147
            SE   AEA+I +EV E+L+
Sbjct: 142 GSEQDIAEAKIELEVLESLQ 161


>gi|401882771|gb|EJT47015.1| hypothetical protein A1Q1_04258 [Trichosporon asahii var. asahii
           CBS 2479]
 gi|406700577|gb|EKD03743.1| hypothetical protein A1Q2_01969 [Trichosporon asahii var. asahii
           CBS 8904]
          Length = 237

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 117/221 (52%), Gaps = 17/221 (7%)

Query: 8   SATRLARRGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGV 67
           S  R+ARRGYAD  D  L     +   +Q V QV++P+ +G  GIL NHVP++  L+PGV
Sbjct: 18  SIARVARRGYADVADDKLKL--SLVSPSQAVTQVNIPAATGDMGILSNHVPSIEALRPGV 75

Query: 68  ITVYETEGVSQKIF-VSSGTITVNDDSSVQIIAEEAHPVD----------SLDASAARDV 116
           + V E  G + K F  + G +  +  S  Q+   +  P            S+ A+ +R  
Sbjct: 76  VEVIEEGGKTGKYFGTAQGRLLSHHWSGRQLHVAQQIPTGFATTSSITRLSIAATWSRGC 135

Query: 117 LSKAQSELSSASSETAKAEAQIAVEVAEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSL 176
            +  + +     S T+     I  ++       VS+G  TV+ ++++ I A EA+P+D  
Sbjct: 136 RAAMECD---ERSPTSPWRCHIH-DLGAFTLTSVSTGFATVHPNNTLTINAVEAYPIDKF 191

Query: 177 DASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEALVAA 217
            A A R+ +S+AQ  + S++SE  KAEA+I +EV EA+ AA
Sbjct: 192 SADAVRNGISEAQKVIGSSASEQEKAEARIELEVFEAINAA 232


>gi|406867844|gb|EKD20882.1| hypothetical protein MBM_01564 [Marssonina brunnea f. sp.
           'multigermtubi' MB_m1]
          Length = 165

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/140 (37%), Positives = 82/140 (58%), Gaps = 4/140 (2%)

Query: 12  LARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGV 67
           L RRGYA    D++  +L   ++  Y +Q V QV++P+ +G  GIL NHVP++  LKPG+
Sbjct: 22  LGRRGYAEAVSDKIKLSLVLPHQSIYRSQGVVQVNIPAETGEMGILANHVPSIEQLKPGL 81

Query: 68  ITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSA 127
           + V E  G S++ F+S G  TV  +S + I A E  P++       R  +++AQ     +
Sbjct: 82  VEVIEESGGSKQFFLSGGFATVQPNSELSINAVEGFPLEDFSIENVRSQIAEAQKIAGGS 141

Query: 128 SSETAKAEAQIAVEVAEALK 147
            SE   AEA+I +EV E+L+
Sbjct: 142 GSEQDIAEAKIEIEVLESLQ 161



 Score = 40.0 bits (92), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           + F+S G  TV  +S + I A E  P++       R  +++AQ     + SE   AEA+I
Sbjct: 93  QFFLSGGFATVQPNSELSINAVEGFPLEDFSIENVRSQIAEAQKIAGGSGSEQDIAEAKI 152

Query: 207 AVEVAEALVAA 217
            +EV E+L AA
Sbjct: 153 EIEVLESLQAA 163


>gi|451997594|gb|EMD90059.1| hypothetical protein COCHEDRAFT_1225615 [Cochliobolus
           heterostrophus C5]
          Length = 165

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/138 (37%), Positives = 87/138 (63%), Gaps = 4/138 (2%)

Query: 14  RRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVIT 69
           RRGYA    D++  +LA  ++  Y +Q+V QV++P+ +G  G+L NHV ++  LKPG++ 
Sbjct: 24  RRGYAEVANDKIKLSLALPHQSIYKSQDVVQVNLPAETGEMGVLANHVASIEQLKPGLVE 83

Query: 70  VYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASS 129
           + E +G +++ F+S G   V  +S + I A E +P++   A A R+ +++AQ   S   S
Sbjct: 84  IIEEQGGNKQFFLSGGFAVVQPNSVLSINAVEGYPLEDFSAEAVRNQIAEAQKIASGNGS 143

Query: 130 ETAKAEAQIAVEVAEALK 147
           ET  AEA+I +EV E+L+
Sbjct: 144 ETDIAEAKIELEVLESLQ 161



 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 42/71 (59%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           + F+S G   V  +S + I A E +P++   A A R+ +++AQ   S   SET  AEA+I
Sbjct: 93  QFFLSGGFAVVQPNSVLSINAVEGYPLEDFSAEAVRNQIAEAQKIASGNGSETDIAEAKI 152

Query: 207 AVEVAEALVAA 217
            +EV E+L AA
Sbjct: 153 ELEVLESLQAA 163


>gi|336371753|gb|EGO00093.1| hypothetical protein SERLA73DRAFT_180517 [Serpula lacrymans var.
           lacrymans S7.3]
 gi|336384507|gb|EGO25655.1| delta subunit of the central stalk of mitochondrial F1F0 ATP
           synthase, ATP16 [Serpula lacrymans var. lacrymans S7.9]
          Length = 164

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/154 (38%), Positives = 88/154 (57%), Gaps = 10/154 (6%)

Query: 4   RLVTSATRLA-------RRGYA---DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGIL 53
           RL++SA R A       RRGYA   D++  +L   ++  +T+ +V QV+V + +G  GIL
Sbjct: 5   RLISSAARRAPSVLTQARRGYAEVSDKIKLSLVLPHQAIFTSTDVVQVNVSAATGDMGIL 64

Query: 54  PNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAA 113
            NHVP++  L+PGV+ V E+   S+K FVS G   V+ ++ + I   EA P+DS    A 
Sbjct: 65  ANHVPSIETLRPGVVEVIESGNTSKKWFVSGGFANVHPNNKLTINVVEAAPLDSFSPEAV 124

Query: 114 RDVLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
           R  L +A    +   SE  K EA+I  +V EAL+
Sbjct: 125 RSNLQEALKVAAGNGSEEVKTEARIEADVYEALQ 158



 Score = 40.0 bits (92), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 35/68 (51%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVS G   V+ ++ + I   EA P+DS    A R  L +A    +   SE  K EA+I
Sbjct: 90  KWFVSGGFANVHPNNKLTINVVEAAPLDSFSPEAVRSNLQEALKVAAGNGSEEVKTEARI 149

Query: 207 AVEVAEAL 214
             +V EAL
Sbjct: 150 EADVYEAL 157


>gi|310791486|gb|EFQ27013.1| ATP synthase [Glomerella graminicola M1.001]
          Length = 161

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 51/136 (37%), Positives = 84/136 (61%)

Query: 12  LARRGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVY 71
           L RR YAD +  +L+  ++  Y +Q+V QV++P+ SG  G+L NHVP++  LK G++ + 
Sbjct: 22  LQRRTYADAIKLSLSLPHQSIYKSQDVVQVNIPAESGEMGVLANHVPSIEQLKSGLVEII 81

Query: 72  ETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSET 131
           E  G S++ F+S G   V  +S + I A E +P++   A A +  +++AQ   S + SE 
Sbjct: 82  EESGPSKQFFLSGGFAVVQPNSVLSINATEGYPLEDFSAEAVKSQIAEAQKVASGSGSEQ 141

Query: 132 AKAEAQIAVEVAEALK 147
             AEA+I +EV E+L+
Sbjct: 142 DIAEAKIELEVLESLQ 157


>gi|302917107|ref|XP_003052364.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256733303|gb|EEU46651.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 165

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 55/139 (39%), Positives = 84/139 (60%), Gaps = 4/139 (2%)

Query: 12  LARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGV 67
           L RR YA    D++  +LA  ++  Y +Q+V QV++P+ SG  G+L NHVP++  LKPG+
Sbjct: 22  LQRRTYAEAVPDKIKLSLALPHQAIYKSQDVVQVNIPAESGEMGVLANHVPSIEQLKPGL 81

Query: 68  ITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSA 127
           + V E  G +++ F+S G  TV  +S + I A E  P++   A A R  +++AQ   S +
Sbjct: 82  VEVIEESGGAKQFFLSGGFATVQPNSILSINAVEGFPLEDFSADAVRAQIAEAQKVASGS 141

Query: 128 SSETAKAEAQIAVEVAEAL 146
            SE   AEA+I +EV E L
Sbjct: 142 GSEQDIAEAKIELEVLETL 160


>gi|449546357|gb|EMD37326.1| hypothetical protein CERSUDRAFT_113978 [Ceriporiopsis subvermispora
           B]
          Length = 164

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 54/138 (39%), Positives = 85/138 (61%), Gaps = 3/138 (2%)

Query: 13  ARRGYA---DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVIT 69
            RRGYA   D++  +L   ++  +T+ +V QV++P+ +G  GIL NHV ++  L+PGV+ 
Sbjct: 21  GRRGYAEAADKLKLSLVLPHQALFTSADVVQVNIPAATGDMGILANHVASIEALRPGVVE 80

Query: 70  VYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASS 129
           V ++   S+K FVSSG  TV+ ++ + I A EA P++   A A R  L++AQ   +   S
Sbjct: 81  VLDSTNTSKKWFVSSGFATVHPNNKLTINAIEAAPLEDFSAEAVRANLAEAQKVAAGNGS 140

Query: 130 ETAKAEAQIAVEVAEALK 147
           E  K EA+I  +V EAL+
Sbjct: 141 EEDKMEARIEADVYEALQ 158


>gi|261196376|ref|XP_002624591.1| ATP synthase F1 epsilon subunit [Ajellomyces dermatitidis SLH14081]
 gi|239595836|gb|EEQ78417.1| ATP synthase F1 epsilon subunit [Ajellomyces dermatitidis SLH14081]
 gi|239609410|gb|EEQ86397.1| ATP synthase F1 epsilon subunit [Ajellomyces dermatitidis ER-3]
 gi|327355857|gb|EGE84714.1| ATP synthase F1 epsilon subunit [Ajellomyces dermatitidis ATCC
           18188]
          Length = 165

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 57/152 (37%), Positives = 89/152 (58%), Gaps = 6/152 (3%)

Query: 2   AARLVTSATR--LARRGYAD----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPN 55
           A R   SA R  L RRGYAD    ++  +L   ++  Y + +V QV++P+ SG  G+L N
Sbjct: 10  ALRASPSAFRAPLQRRGYADAVADKIKLSLVLPHESIYKSTDVVQVNIPAESGVMGVLAN 69

Query: 56  HVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARD 115
           HVP++  LKPG++ + E  G +++ F+S G   V  DS + I A E  P+D   A A + 
Sbjct: 70  HVPSIEQLKPGLVEIIEESGGTKQFFLSGGFAIVQPDSQLSINAVEGFPLDQFSAEAVKA 129

Query: 116 VLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
            +++AQ   + + SE   AEA+I +EV E+L+
Sbjct: 130 QIAEAQKIANGSGSEQDIAEAKIELEVLESLE 161



 Score = 42.7 bits (99), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 40/71 (56%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           + F+S G   V  DS + I A E  P+D   A A +  +++AQ   + + SE   AEA+I
Sbjct: 93  QFFLSGGFAIVQPDSQLSINAVEGFPLDQFSAEAVKAQIAEAQKIANGSGSEQDIAEAKI 152

Query: 207 AVEVAEALVAA 217
            +EV E+L AA
Sbjct: 153 ELEVLESLEAA 163


>gi|407925254|gb|EKG18269.1| ATPase F1 complex delta/epsilon subunit [Macrophomina phaseolina
           MS6]
          Length = 167

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 53/138 (38%), Positives = 84/138 (60%), Gaps = 4/138 (2%)

Query: 14  RRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVIT 69
           RRGYA    D++  +LA  ++  + +  V QV++P+ +G  G+L NHVP++  LKPG+I 
Sbjct: 26  RRGYAEAASDKIKLSLALPHQTIFKSSEVVQVNLPADTGDMGVLANHVPSIEQLKPGLIE 85

Query: 70  VYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASS 129
           V E +G S++ FVS G   V   S + + A EA+P++   A   R+ +++AQ   S   S
Sbjct: 86  VIEEQGGSKQWFVSGGFAVVQPGSELSVNAVEAYPLEDFSAENVRNQIAEAQKVASGGGS 145

Query: 130 ETAKAEAQIAVEVAEALK 147
           E   AEA+I +EV E+L+
Sbjct: 146 EVDVAEAKIELEVLESLQ 163



 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 39/70 (55%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           + FVS G   V   S + + A EA+P++   A   R+ +++AQ   S   SE   AEA+I
Sbjct: 95  QWFVSGGFAVVQPGSELSVNAVEAYPLEDFSAENVRNQIAEAQKVASGGGSEVDVAEAKI 154

Query: 207 AVEVAEALVA 216
            +EV E+L A
Sbjct: 155 ELEVLESLQA 164


>gi|388851677|emb|CCF54673.1| probable ATP synthase delta chain precursor, mitochondrial
           [Ustilago hordei]
          Length = 169

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 56/139 (40%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 13  ARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVI 68
           ARRGYA    D++  +    ++  Y +  V QV++ S +G  GIL +HVP +  L+PGV+
Sbjct: 26  ARRGYAEAVSDKLKLSFILPHEAIYNSTEVTQVNIASSTGDMGILASHVPAVEELRPGVL 85

Query: 69  TVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS 128
            V E+ G ++K FVS G  TV+ ++ + + A EA+P++     A R  LS+AQ   SS S
Sbjct: 86  EVVESSG-TKKWFVSGGFATVHPNNKLVVNAIEAYPLEQFSPEAVRSALSEAQRVASSGS 144

Query: 129 SETAKAEAQIAVEVAEALK 147
           S  AKAE++I +EV  AL+
Sbjct: 145 SAEAKAESEIEIEVYTALQ 163



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 47/78 (60%)

Query: 140 VEVAEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSET 199
           VE +   K FVS G  TV+ ++ + + A EA+P++     A R  LS+AQ   SS SS  
Sbjct: 88  VESSGTKKWFVSGGFATVHPNNKLVVNAIEAYPLEQFSPEAVRSALSEAQRVASSGSSAE 147

Query: 200 AKAEAQIAVEVAEALVAA 217
           AKAE++I +EV  AL AA
Sbjct: 148 AKAESEIEIEVYTALQAA 165


>gi|392593744|gb|EIW83069.1| epsilon subunit of F1F0-ATP synthase N-terminal domain-containing
           protein [Coniophora puteana RWD-64-598 SS2]
          Length = 165

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 60/157 (38%), Positives = 90/157 (57%), Gaps = 11/157 (7%)

Query: 2   AARLVTSATR-------LARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAF 50
           A RL++SA R       +ARRGYA    D+++ +L   ++  YT+  V QV+V + +G  
Sbjct: 3   ALRLISSAARRAPASFAVARRGYAEAASDRINLSLVLPHQAIYTSSEVIQVNVAAATGDM 62

Query: 51  GILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDA 110
           GIL NHVP++  L+PGV+ V E+   S+K FVS G   V+  + + I   EA P+++  A
Sbjct: 63  GILANHVPSIEALRPGVVEVIESGSASKKWFVSGGFANVHPGNKLTINVVEAAPLENFSA 122

Query: 111 SAARDVLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
            A R  L +A    +   SE  K EA+I  +V EAL+
Sbjct: 123 EAVRANLQEALKVAAGNGSEEDKLEARIEADVYEALQ 159


>gi|409045074|gb|EKM54555.1| hypothetical protein PHACADRAFT_258487 [Phanerochaete carnosa
           HHB-10118-sp]
          Length = 162

 Score = 96.3 bits (238), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 59/156 (37%), Positives = 91/156 (58%), Gaps = 10/156 (6%)

Query: 2   AARLVTSATRLA-------RRGYA---DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFG 51
           A RL +S TR A       RRGYA   D++  +L   ++  +++ +V QV++P+ +G  G
Sbjct: 3   ALRLASSLTRRAPKALTASRRGYAEASDKIRLSLVLPHQAIFSSTDVVQVNLPAATGDMG 62

Query: 52  ILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDAS 111
           IL NHV ++  L+PGV+ V ++   S+K FVS G  TV+ ++ + +   EA P++S  A 
Sbjct: 63  ILANHVASIEALRPGVVEVIDSANASKKFFVSGGFATVHPNNKLTVNVVEAAPLESFSAE 122

Query: 112 AARDVLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
           A R  L +AQ   +   SE  K EA+I  EV EAL+
Sbjct: 123 AVRANLQEAQRVANGNGSEEDKLEARIETEVYEALQ 158


>gi|189202306|ref|XP_001937489.1| ATP synthase delta chain, mitochondrial precursor [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187984588|gb|EDU50076.1| ATP synthase delta chain, mitochondrial precursor [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 165

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/138 (37%), Positives = 85/138 (61%), Gaps = 4/138 (2%)

Query: 14  RRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVIT 69
           RRGYA    D++  +LA  ++  Y +Q+V QV++P+ +G  G+L NHV ++  LKPG++ 
Sbjct: 24  RRGYAEVANDKIKLSLALPHQSIYKSQDVVQVNLPAETGDMGVLANHVASIEQLKPGLVE 83

Query: 70  VYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASS 129
           + E  G S++ F+S G   V  +S + I A E +P++   A A R+ + +AQ   S + S
Sbjct: 84  IIEESGGSKQFFLSGGFAVVQPNSVLSINAVEGYPLEDFSAEAVRNQIGEAQKIASGSGS 143

Query: 130 ETAKAEAQIAVEVAEALK 147
           E   AEA+I +EV E+L+
Sbjct: 144 EADIAEAKIELEVLESLQ 161


>gi|171685724|ref|XP_001907803.1| hypothetical protein [Podospora anserina S mat+]
 gi|170942823|emb|CAP68476.1| unnamed protein product [Podospora anserina S mat+]
          Length = 164

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 53/138 (38%), Positives = 84/138 (60%), Gaps = 5/138 (3%)

Query: 14  RRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVIT 69
           RRGYA    D++  +L+  ++  Y +Q+V QV++P+ SG  G+L NHVP++  LKPGV+ 
Sbjct: 24  RRGYAEAVSDKIKLSLSLPHQAVYKSQDVVQVNIPAESGEMGVLANHVPSIEQLKPGVVE 83

Query: 70  VYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASS 129
           + E  G +++ F+S G   V  +S + I A E  P++   A A R  +++AQ   S + S
Sbjct: 84  IIEESG-NKQFFLSGGFAVVQPNSVLSINAVEGFPLEDFSAEAVRSQIAEAQKVASGSGS 142

Query: 130 ETAKAEAQIAVEVAEALK 147
           E   AEA+I +EV E L+
Sbjct: 143 EQEIAEAKIELEVLETLQ 160


>gi|320588087|gb|EFX00562.1| ATP synthase delta mitochondrial [Grosmannia clavigera kw1407]
          Length = 164

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/152 (36%), Positives = 92/152 (60%), Gaps = 7/152 (4%)

Query: 2   AARLVTSATRLA--RRGYAD----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPN 55
           A R+  +  R+A  RR YAD    +++ +L+  ++  Y +Q+V QV++P+ SG  G+L N
Sbjct: 10  ALRVRPAVARMAVQRRTYADAVPDKINLSLSLPHQSIYKSQDVVQVNIPAESGDMGVLAN 69

Query: 56  HVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARD 115
           HVP++  LKPGV+ + E  G S++ F+S G   V  +S + I A E +P++     A + 
Sbjct: 70  HVPSIEQLKPGVLEIIEESG-SKQYFLSGGFAVVQPNSHLSINAVEGYPLEDFSVDAVKS 128

Query: 116 VLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
            L++AQ   S + SE   AEA+I +EV E+L+
Sbjct: 129 QLAEAQKVASGSGSEREIAEAKIEIEVLESLQ 160



 Score = 40.8 bits (94), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 39/70 (55%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           + F+S G   V  +S + I A E +P++     A +  L++AQ   S + SE   AEA+I
Sbjct: 92  QYFLSGGFAVVQPNSHLSINAVEGYPLEDFSVDAVKSQLAEAQKVASGSGSEREIAEAKI 151

Query: 207 AVEVAEALVA 216
            +EV E+L A
Sbjct: 152 EIEVLESLQA 161


>gi|451852084|gb|EMD65379.1| hypothetical protein COCSADRAFT_35437 [Cochliobolus sativus ND90Pr]
          Length = 165

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/138 (36%), Positives = 86/138 (62%), Gaps = 4/138 (2%)

Query: 14  RRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVIT 69
           RRGYA    D++  +LA  ++  Y +Q+V QV++P+ +G  G+L NHV ++  LKPG++ 
Sbjct: 24  RRGYAEVANDKIKLSLALPHQSIYKSQDVVQVNLPAETGEMGVLANHVASIEQLKPGLVE 83

Query: 70  VYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASS 129
           + E +G +++ F+S G   V  +S + I A E +P++   A A R+ +++AQ   S   S
Sbjct: 84  IIEEQGGNKQFFLSGGFAVVQPNSVLSINAVEGYPLEDFSAEAVRNQIAEAQKIASGNGS 143

Query: 130 ETAKAEAQIAVEVAEALK 147
           E   AEA+I +EV E+L+
Sbjct: 144 EADIAEAKIELEVLESLQ 161


>gi|429854179|gb|ELA29205.1| ATP synthase delta mitochondrial [Colletotrichum gloeosporioides
           Nara gc5]
          Length = 165

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 87/140 (62%), Gaps = 4/140 (2%)

Query: 12  LARRGYAD----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGV 67
           L RR YAD    ++  +L+  ++  Y++++V QV++P+ SG  G+L NHVP++  LKPG+
Sbjct: 22  LQRRTYADAVPDKIKLSLSLPHQSIYSSKDVVQVNIPADSGEMGVLANHVPSIEQLKPGL 81

Query: 68  ITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSA 127
           + V E  G S++ F+S G   V  +S + I A E +P++   A A +  +++AQ   + +
Sbjct: 82  VEVVEESGPSKQFFLSGGFAVVQPNSVLSINATEGYPIEDFSAEAVKSQIAEAQKVANGS 141

Query: 128 SSETAKAEAQIAVEVAEALK 147
            SE   AEA+I +EV E+L+
Sbjct: 142 GSEQDIAEAKIELEVLESLQ 161



 Score = 41.6 bits (96), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 41/71 (57%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           + F+S G   V  +S + I A E +P++   A A +  +++AQ   + + SE   AEA+I
Sbjct: 93  QFFLSGGFAVVQPNSVLSINATEGYPIEDFSAEAVKSQIAEAQKVANGSGSEQDIAEAKI 152

Query: 207 AVEVAEALVAA 217
            +EV E+L AA
Sbjct: 153 ELEVLESLQAA 163


>gi|281200845|gb|EFA75061.1| ATP synthase F1 delta [Polysphondylium pallidum PN500]
          Length = 176

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 74/128 (57%)

Query: 19  DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQ 78
           D + F+    +++ + N+ V+ + +P   G FG+L NH+P +A LKPGV+ V+   G   
Sbjct: 41  DLLSFSFMVPHQILFKNKKVQMLTLPGARGVFGVLKNHIPKIAELKPGVVQVHHESGDVD 100

Query: 79  KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 138
           K F+S G   +N D+S  I A EA PVD LDA+  ++ L++     + AS E AKA A I
Sbjct: 101 KYFISGGFAFINPDASCYINAVEAVPVDQLDANEVKNGLARYTQLYNEASDEAAKATALI 160

Query: 139 AVEVAEAL 146
            +E  + +
Sbjct: 161 GLEAHQQM 168



 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 1/115 (0%)

Query: 105 VDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEALKIFVSSGTITVNDDSSVQ 164
           V  L    AR V    ++ +   + E      Q+  E  +  K F+S G   +N D+S  
Sbjct: 60  VQMLTLPGARGVFGVLKNHIPKIA-ELKPGVVQVHHESGDVDKYFISGGFAFINPDASCY 118

Query: 165 IIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEALVAAAS 219
           I A EA PVD LDA+  ++ L++     + AS E AKA A I +E  + +  A  
Sbjct: 119 INAVEAVPVDQLDANEVKNGLARYTQLYNEASDEAAKATALIGLEAHQQMAYACG 173


>gi|403412398|emb|CCL99098.1| predicted protein [Fibroporia radiculosa]
          Length = 164

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/156 (39%), Positives = 90/156 (57%), Gaps = 10/156 (6%)

Query: 2   AARLVTSATRLA-------RRGYA---DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFG 51
           A RLV+SA R A       RRGYA   D++  +L   ++  +T+  V QV++ + +G  G
Sbjct: 3   ALRLVSSAARRAPKVFTSGRRGYAEAADKIKLSLVLPHQSIFTSTEVVQVNISAATGDMG 62

Query: 52  ILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDAS 111
           IL NHVP++  L+PGV+ V E    S+K FVS G  TV+ ++S+ I A EA P++     
Sbjct: 63  ILANHVPSIEPLRPGVVEVIEPGSASKKWFVSGGFATVHPNNSLTINAVEAAPLEDFSPE 122

Query: 112 AARDVLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
           A R  L +A    + + SE  K EA+I  +V EAL+
Sbjct: 123 AIRANLQEALKVAAGSGSEEDKMEARIEADVYEALQ 158


>gi|46124541|ref|XP_386824.1| hypothetical protein FG06648.1 [Gibberella zeae PH-1]
          Length = 289

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 83/139 (59%)

Query: 12  LARRGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVY 71
           L RR YA+ +  +LA  ++  Y + +V QV++P+ SG  G+L NHVP++  LKPG++ V 
Sbjct: 150 LQRRTYAEAIKLSLALPHQSIYKSHDVVQVNIPAESGEMGVLANHVPSIEQLKPGLVEVV 209

Query: 72  ETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSET 131
           E    S++ F+S G  TV  +S + I A E +P++   A A R  +++AQ   + + SE 
Sbjct: 210 EESAGSKQFFLSGGFATVQPNSVLSINAVEGYPLEDFSAEAIRAQIAEAQKVANGSGSEQ 269

Query: 132 AKAEAQIAVEVAEALKIFV 150
             AEA+I +EV E L   V
Sbjct: 270 DIAEAKIELEVLETLSAHV 288


>gi|378733064|gb|EHY59523.1| ATP synthase subunit delta, mitochondrial [Exophiala dermatitidis
           NIH/UT8656]
          Length = 165

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/159 (35%), Positives = 89/159 (55%), Gaps = 13/159 (8%)

Query: 2   AARLVTSATR---------LARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSG 48
           A RL  +A R         + RRGYA    D++  +LA  ++  Y +Q+V QV+VP+ SG
Sbjct: 3   ALRLSRAALRVRSAAAFNPIQRRGYAEAVSDKIKLSLALPHQAIYKSQDVVQVNVPAESG 62

Query: 49  AFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSL 108
             GIL  HVP++  LKPG++ + E  G +++ F+S G   V  +S + I A E  P++  
Sbjct: 63  EMGILAQHVPSIEQLKPGLVEIIEENGGNKQFFLSGGFAVVQPNSHLTINAVEGFPLEDF 122

Query: 109 DASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
              A R  +++AQ   +   SE   AEA+I +EV E+L+
Sbjct: 123 SEEAVRSQIAEAQKIANGNGSEQDIAEAKIELEVLESLQ 161


>gi|452820732|gb|EME27771.1| F-type H+-transporting ATPase subunit delta [Galdieria sulphuraria]
          Length = 163

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 84/143 (58%), Gaps = 9/143 (6%)

Query: 12  LARRGYADQ-------MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILK 64
           + +RG+ADQ       +  + A+       + +V  V  P+ +G  G+LP HVPT+A LK
Sbjct: 18  ILKRGFADQVAQGSEKLKLSFATPTSALRKDASVDMVVFPAATGMMGVLPQHVPTVAQLK 77

Query: 65  PGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSEL 124
           PGV+TV E EG   K FVSSG   V  D +  I+A EA  ++ LD  A +  LS+ +S +
Sbjct: 78  PGVVTVIE-EGKEDKYFVSSGFAFVTQDRT-DILAVEAVRLEDLDKEAVQRGLSECESAI 135

Query: 125 SSASSETAKAEAQIAVEVAEALK 147
           +SAS E ++A AQI VEV  A+K
Sbjct: 136 NSASDEVSQAIAQIGVEVHSAMK 158



 Score = 44.3 bits (103), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 1/71 (1%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG   V  D +  I+A EA  ++ LD  A +  LS+ +S ++SAS E ++A AQI
Sbjct: 91  KYFVSSGFAFVTQDRT-DILAVEAVRLEDLDKEAVQRGLSECESAINSASDEVSQAIAQI 149

Query: 207 AVEVAEALVAA 217
            VEV  A+ +A
Sbjct: 150 GVEVHSAMKSA 160


>gi|242804375|ref|XP_002484362.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Talaromyces stipitatus ATCC 10500]
 gi|218717707|gb|EED17128.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Talaromyces stipitatus ATCC 10500]
          Length = 165

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 91/155 (58%), Gaps = 6/155 (3%)

Query: 2   AARLVTSATRL--ARRGYAD----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPN 55
           A R+  +A R+    R YAD    ++  +LA  ++  + + +V QV++P+ SG  GIL N
Sbjct: 10  ALRVRPTAIRVPAGHRTYADAVADKIKLSLAMPHQSLFKSTDVVQVNIPAESGEMGILAN 69

Query: 56  HVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARD 115
           HVP++  LKPG++ V E  G +++ F+S G   V  DS + I A E +P++   A A R 
Sbjct: 70  HVPSIEQLKPGLVEVIEESGGTKQFFLSGGFAVVQPDSRLSINAVEGYPLEDFSADAIRA 129

Query: 116 VLSKAQSELSSASSETAKAEAQIAVEVAEALKIFV 150
            +++AQ   + + SE   AEA+I +EV E L++ V
Sbjct: 130 QITEAQKIANGSGSEQDIAEAKIELEVLETLQMHV 164


>gi|190349051|gb|EDK41627.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
           6260]
          Length = 161

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/146 (36%), Positives = 83/146 (56%), Gaps = 8/146 (5%)

Query: 9   ATRLARRGYA-------DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLA 61
           ++ + RRGYA       D +  +LA  ++  Y+   V+QV++PS +G  GIL NH+P + 
Sbjct: 13  SSNIVRRGYATETTTGSDALKLSLALPHQTLYSESEVQQVNLPSINGDLGILANHIPIVE 72

Query: 62  ILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQ 121
            L+PG++ +    G +++ FVS G  TV   + + I A EA   D  DASA + +++ AQ
Sbjct: 73  QLRPGLLEIISKGGETEQYFVSGGIATVQPGNKLTISAIEAFKPDQFDASAVKQLIADAQ 132

Query: 122 SELSSASSETAKAEAQIAVEVAEALK 147
               S S E   AEA I +EV EAL+
Sbjct: 133 KRAGS-SDEVVVAEANIELEVLEALQ 157



 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 39/76 (51%), Gaps = 1/76 (1%)

Query: 143 AEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKA 202
            E  + FVS G  TV   + + I A EA   D  DASA + +++ AQ    S S E   A
Sbjct: 86  GETEQYFVSGGIATVQPGNKLTISAIEAFKPDQFDASAVKQLIADAQKRAGS-SDEVVVA 144

Query: 203 EAQIAVEVAEALVAAA 218
           EA I +EV EAL   A
Sbjct: 145 EANIELEVLEALQGVA 160


>gi|212539490|ref|XP_002149900.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Talaromyces marneffei ATCC 18224]
 gi|210067199|gb|EEA21291.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Talaromyces marneffei ATCC 18224]
          Length = 190

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 88/148 (59%), Gaps = 6/148 (4%)

Query: 2   AARLVTSATRL--ARRGYAD----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPN 55
           A R+  +A R+   RR YAD    ++  +LA  ++  + + +V QV++P+ SG  GIL N
Sbjct: 10  ALRVRPTAIRIPAGRRTYADAVADKIKLSLAMPHQNLFKSTDVVQVNIPAESGEMGILAN 69

Query: 56  HVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARD 115
           HVP++  LKPG++ V E  G +++ F+S G   V  DS + I A EA+P++   A A R 
Sbjct: 70  HVPSIEQLKPGLVEVIEESGSTKQFFLSGGFAVVQPDSRLSINAVEAYPLEDFSADAIRS 129

Query: 116 VLSKAQSELSSASSETAKAEAQIAVEVA 143
            +++AQ   + + SE   AEA+I +EV 
Sbjct: 130 QIAEAQKIANGSGSEQDIAEAKIELEVC 157



 Score = 40.4 bits (93), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 37/65 (56%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           + F+S G   V  DS + I A EA+P++   A A R  +++AQ   + + SE   AEA+I
Sbjct: 93  QFFLSGGFAVVQPDSRLSINAVEAYPLEDFSADAIRSQIAEAQKIANGSGSEQDIAEAKI 152

Query: 207 AVEVA 211
            +EV 
Sbjct: 153 ELEVC 157


>gi|145229221|ref|XP_001388919.1| ATP synthase subunit delta [Aspergillus niger CBS 513.88]
 gi|134055020|emb|CAK37027.1| unnamed protein product [Aspergillus niger]
 gi|350638073|gb|EHA26429.1| hypothetical protein ASPNIDRAFT_206061 [Aspergillus niger ATCC
           1015]
          Length = 165

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/152 (36%), Positives = 86/152 (56%), Gaps = 6/152 (3%)

Query: 2   AARLVTSATR--LARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPN 55
           A R   SA R  L RRGYA    D++  +L   ++  + +  V QV++P+ SG  G+L N
Sbjct: 10  AFRARPSALRVPLQRRGYAEAVSDKIKLSLTLPHQSIFKSTGVVQVNIPAESGEMGVLAN 69

Query: 56  HVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARD 115
           HVP++  LKPG++ + E  G S+K F+S G   V  DS + I A E  P++       R 
Sbjct: 70  HVPSIEQLKPGLVEIVEEGGASKKFFLSGGFAVVQPDSQLSINAVEGFPLEEFSIDNVRS 129

Query: 116 VLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
            +++AQ   + + SE   AEA+I +EV E+L+
Sbjct: 130 QIAEAQKIANGSGSEQDIAEAKIELEVLESLQ 161


>gi|148699643|gb|EDL31590.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit, isoform CRA_a [Mus musculus]
          Length = 137

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/85 (56%), Positives = 63/85 (74%)

Query: 62  ILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQ 121
           +L+PG++ V+  +G + K FVSSG++TVN DSSVQ++AEEA  +D LD  AAR  L KAQ
Sbjct: 48  VLRPGLVVVHTEDGTTTKYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAARANLEKAQ 107

Query: 122 SELSSASSETAKAEAQIAVEVAEAL 146
           SELS A+ E A+AE QI +E  EAL
Sbjct: 108 SELSGAADEAARAEIQIRIEANEAL 132



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/71 (63%), Positives = 53/71 (74%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN DSSVQ++AEEA  +D LD  AAR  L KAQSELS A+ E A+AE QI
Sbjct: 65  KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAARANLEKAQSELSGAADEAARAEIQI 124

Query: 207 AVEVAEALVAA 217
            +E  EALV A
Sbjct: 125 RIEANEALVKA 135


>gi|396469634|ref|XP_003838453.1| hypothetical protein LEMA_P113890.1 [Leptosphaeria maculans JN3]
 gi|312215021|emb|CBX94974.1| hypothetical protein LEMA_P113890.1 [Leptosphaeria maculans JN3]
          Length = 169

 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 84/137 (61%), Gaps = 4/137 (2%)

Query: 9   ATRLARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILK 64
           A    RRGYA    D++  TLA  ++  Y +Q+V QV++P+ +G  G+L +HVP++  LK
Sbjct: 19  ARPFQRRGYAEVASDKIKLTLALPHQSIYKSQDVVQVNLPAETGDMGVLASHVPSIEQLK 78

Query: 65  PGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSEL 124
           PG++ V E +G S++ F+S G   V  +S + I A E +P++   A A ++ +++AQ   
Sbjct: 79  PGLVEVIEEQGGSKQFFLSGGFAVVQPNSVLSINAVEGYPIEDFSAEAVKNQMAEAQKIA 138

Query: 125 SSASSETAKAEAQIAVE 141
           S + SE   AEA+I +E
Sbjct: 139 SGSGSEADIAEAKIELE 155



 Score = 37.0 bits (84), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 36/63 (57%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           + F+S G   V  +S + I A E +P++   A A ++ +++AQ   S + SE   AEA+I
Sbjct: 93  QFFLSGGFAVVQPNSVLSINAVEGYPIEDFSAEAVKNQMAEAQKIASGSGSEADIAEAKI 152

Query: 207 AVE 209
            +E
Sbjct: 153 ELE 155


>gi|302680807|ref|XP_003030085.1| hypothetical protein SCHCODRAFT_68954 [Schizophyllum commune H4-8]
 gi|300103776|gb|EFI95182.1| hypothetical protein SCHCODRAFT_68954 [Schizophyllum commune H4-8]
          Length = 163

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/155 (38%), Positives = 90/155 (58%), Gaps = 5/155 (3%)

Query: 2   AARLVTSATRLARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHV 57
           A RL  SA    RRGYA    D++  +L   ++  +T+ +V QV++ + +G  GIL NHV
Sbjct: 10  ARRLPRSAAPWGRRGYAEAASDKIKLSLVLPHQAIFTSADVVQVNIAAATGDMGILANHV 69

Query: 58  PTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVL 117
           P++  L+PGV+ V E  G S+K FVS G  TV+  + + I A EA P++     A +  L
Sbjct: 70  PSIEPLRPGVLEVLEGAG-SKKWFVSGGFATVHPGNKLTINAIEAAPLEDFSPEAIKANL 128

Query: 118 SKAQSELSSASSETAKAEAQIAVEVAEALKIFVSS 152
           ++AQ   +   SE  K EA+I  +V EAL+  VS+
Sbjct: 129 AEAQKVAAGNGSEEDKLEARIEADVYEALQHAVSA 163


>gi|45190599|ref|NP_984853.1| AEL008Wp [Ashbya gossypii ATCC 10895]
 gi|51701327|sp|Q757N0.1|ATPD_ASHGO RecName: Full=ATP synthase subunit delta, mitochondrial; AltName:
           Full=F-ATPase delta subunit; Flags: Precursor
 gi|44983578|gb|AAS52677.1| AEL008Wp [Ashbya gossypii ATCC 10895]
 gi|374108075|gb|AEY96982.1| FAEL008Wp [Ashbya gossypii FDAG1]
          Length = 158

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/139 (42%), Positives = 79/139 (56%), Gaps = 6/139 (4%)

Query: 13  ARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVI 68
           ARR YA    D +    A  ++  +    VKQV++P  +G  GIL NHVP +  L PGV+
Sbjct: 18  ARRTYAEAAADALKLNFALPHETLFAGTAVKQVNLPVKTGQIGILANHVPIVEQLVPGVV 77

Query: 69  TVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS 128
            V E    S+K FVS G  TV  DS++ I + EA P+DS  A   R +L++AQ    +A 
Sbjct: 78  EVLEGSE-SKKFFVSGGFATVQPDSTLSITSVEAFPLDSFSAENVRALLAEAQKNAGAAD 136

Query: 129 SETAKAEAQIAVEVAEALK 147
           S  A AEA I +EV EAL+
Sbjct: 137 SRVA-AEASIQIEVLEALQ 154



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 1/78 (1%)

Query: 140 VEVAEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSET 199
           +E +E+ K FVS G  TV  DS++ I + EA P+DS  A   R +L++AQ    +A S  
Sbjct: 80  LEGSESKKFFVSGGFATVQPDSTLSITSVEAFPLDSFSAENVRALLAEAQKNAGAADSRV 139

Query: 200 AKAEAQIAVEVAEALVAA 217
           A AEA I +EV EAL AA
Sbjct: 140 A-AEASIQIEVLEALQAA 156


>gi|392577138|gb|EIW70268.1| hypothetical protein TREMEDRAFT_56865 [Tremella mesenterica DSM
           1558]
          Length = 166

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 90/149 (60%), Gaps = 4/149 (2%)

Query: 3   ARLVTSATRLARRGYAD----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVP 58
           AR + +  +L++RGYAD    ++  +L   ++  Y++  V QV++ + SG  GIL  HVP
Sbjct: 13  ARRIPTVGKLSKRGYADVAEDKLKLSLVLPHQSLYSSVAVTQVNLSAASGDMGILAGHVP 72

Query: 59  TLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLS 118
            +  L+PGVI V E  G ++K F S+G  T+++++ + I A EA+P+++      R  L+
Sbjct: 73  VVEALRPGVIEVIEEGGSTKKWFASTGFATMHENNMLTINAVEAYPLENFSLENVRAGLA 132

Query: 119 KAQSELSSASSETAKAEAQIAVEVAEALK 147
            A   LSSA+ +  KAEA + + V EAL+
Sbjct: 133 DANRVLSSAAPDAEKAEAGVELVVFEALQ 161



 Score = 42.7 bits (99), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 43/71 (60%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K F S+G  T+++++ + I A EA+P+++      R  L+ A   LSSA+ +  KAEA +
Sbjct: 93  KWFASTGFATMHENNMLTINAVEAYPLENFSLENVRAGLADANRVLSSAAPDAEKAEAGV 152

Query: 207 AVEVAEALVAA 217
            + V EAL AA
Sbjct: 153 ELVVFEALQAA 163


>gi|440636077|gb|ELR05996.1| ATP synthase subunit delta, mitochondrial [Geomyces destructans
           20631-21]
          Length = 165

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/138 (39%), Positives = 81/138 (58%), Gaps = 4/138 (2%)

Query: 14  RRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVIT 69
           RRGYA    D++  +L   ++  YT+Q+V QV++ + SG  G+L NHVP++  LKPG+I 
Sbjct: 24  RRGYAEAVSDKIKLSLNLPHQKVYTSQDVVQVNIAAESGEMGLLANHVPSIEQLKPGLIE 83

Query: 70  VYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASS 129
           V E    S++ F+S G   +N +S + I A E  P++     A R  L++AQ   S   S
Sbjct: 84  VIEESAGSKQFFLSGGFAVMNPNSVLSINAVEGFPLEDFSIEAVRSQLTEAQKVASGNGS 143

Query: 130 ETAKAEAQIAVEVAEALK 147
            T  AEA I +EV E+L+
Sbjct: 144 ATEIAEANIEIEVLESLQ 161



 Score = 42.4 bits (98), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 41/77 (53%)

Query: 141 EVAEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETA 200
           E A + + F+S G   +N +S + I A E  P++     A R  L++AQ   S   S T 
Sbjct: 87  ESAGSKQFFLSGGFAVMNPNSVLSINAVEGFPLEDFSIEAVRSQLTEAQKVASGNGSATE 146

Query: 201 KAEAQIAVEVAEALVAA 217
            AEA I +EV E+L AA
Sbjct: 147 IAEANIEIEVLESLQAA 163


>gi|330924462|ref|XP_003300649.1| hypothetical protein PTT_11953 [Pyrenophora teres f. teres 0-1]
 gi|311325113|gb|EFQ91256.1| hypothetical protein PTT_11953 [Pyrenophora teres f. teres 0-1]
          Length = 992

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/148 (36%), Positives = 89/148 (60%), Gaps = 4/148 (2%)

Query: 14  RRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVIT 69
           RRGYA    D++  +LA  ++  Y +Q+V QV++P+ +G  G+L NHV ++  LKPG++ 
Sbjct: 24  RRGYAEVANDKIKLSLALPHQSIYKSQDVVQVNLPAETGDMGVLANHVASIEQLKPGLVE 83

Query: 70  VYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASS 129
           + E  G S++ F+S G   V  +S + I A E +P++   A A R+ + +AQ   S + S
Sbjct: 84  IIEESGGSKQFFLSGGFAVVQPNSVLSINAVEGYPLEDFSAEAVRNQIGEAQKIASGSGS 143

Query: 130 ETAKAEAQIAVEVAEALKIFVSSGTITV 157
           E   AEA+I +EV E+L+  ++    TV
Sbjct: 144 EADIAEAKIELEVLESLQAALNPPNSTV 171


>gi|428182069|gb|EKX50931.1| hypothetical protein GUITHDRAFT_151115 [Guillardia theta CCMP2712]
          Length = 171

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 61/159 (38%), Positives = 85/159 (53%), Gaps = 14/159 (8%)

Query: 2   AARLVTSATRLAR---RGYAD-----------QMDFTLASGNKVFYTNQNVKQVDVPSFS 47
           A RL     R  R   RG AD           ++ F L + +K  +    V QV VP   
Sbjct: 5   ARRLAVRVPRGFRPPSRGLADDAAAKGGPIPTKLTFNLLAPHKAIFNKAEVDQVIVPGAD 64

Query: 48  GAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDS 107
           G FG+LP HVPT+A L+PG++ V    G  +K F+SSG   V+ +S++ +   E   +D 
Sbjct: 65  GMFGVLPGHVPTIAELRPGMVEVTVASGDVKKYFLSSGFAFVHANSTLDVCGVEIVQLDE 124

Query: 108 LDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           LD SA     S+A++ LSSA+ E  KA+AQIAV+V   L
Sbjct: 125 LDPSAVSSGKSEAENALSSATDEVEKAKAQIAVDVYTTL 163



 Score = 46.2 bits (108), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 49/89 (55%)

Query: 129 SETAKAEAQIAVEVAEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKA 188
           +E      ++ V   +  K F+SSG   V+ +S++ +   E   +D LD SA     S+A
Sbjct: 78  AELRPGMVEVTVASGDVKKYFLSSGFAFVHANSTLDVCGVEIVQLDELDPSAVSSGKSEA 137

Query: 189 QSELSSASSETAKAEAQIAVEVAEALVAA 217
           ++ LSSA+ E  KA+AQIAV+V   L  A
Sbjct: 138 ENALSSATDEVEKAKAQIAVDVYTTLTEA 166


>gi|389626007|ref|XP_003710657.1| ATP synthase subunit delta [Magnaporthe oryzae 70-15]
 gi|351650186|gb|EHA58045.1| ATP synthase subunit delta [Magnaporthe oryzae 70-15]
 gi|440468762|gb|ELQ37904.1| ATP synthase delta chain [Magnaporthe oryzae Y34]
 gi|440478797|gb|ELQ59596.1| ATP synthase delta chain [Magnaporthe oryzae P131]
          Length = 164

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 53/140 (37%), Positives = 85/140 (60%), Gaps = 5/140 (3%)

Query: 12  LARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGV 67
           L RRGYA    D++  +L+  ++  Y +Q+V QV++P+ SG  G+L NHVP++  LKPG+
Sbjct: 22  LQRRGYAEAVADKIKLSLSLPHQSIYKSQDVVQVNIPAESGEMGVLANHVPSIEQLKPGL 81

Query: 68  ITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSA 127
           + V E  G S++ F++ G   V  +SS+ I A E  P++   A A +  +S+A    +  
Sbjct: 82  VEVVEESG-SKQFFLAGGFAVVQPNSSMSINATEGFPLEDFSAEAVKAQISEATKVANGN 140

Query: 128 SSETAKAEAQIAVEVAEALK 147
            SE   AEA+I +EV E+L+
Sbjct: 141 GSEQDIAEAKIELEVLESLQ 160


>gi|384501195|gb|EIE91686.1| hypothetical protein RO3G_16397 [Rhizopus delemar RA 99-880]
          Length = 163

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 61/152 (40%), Positives = 86/152 (56%), Gaps = 8/152 (5%)

Query: 3   ARLVTSATRLARRGYA-------DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPN 55
           AR      RLAR  YA       D +  T    +K  Y    V+QV++ + SG  GIL N
Sbjct: 8   ARAAVKPVRLAR-FYASEAPASTDALRLTFVVPHKSIYKATTVQQVNLAATSGDMGILAN 66

Query: 56  HVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARD 115
           HVP++  L PGVI V E+  V++K FVS G  T+N DS++ + A EA  ++ L     + 
Sbjct: 67  HVPSIEQLNPGVIEVIESAEVTKKFFVSGGFATINPDSTLNVNAVEAFSLEELSLERVQA 126

Query: 116 VLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
            L++AQ   +SASS+  KA A+I V+V EAL+
Sbjct: 127 GLAEAQRNAASASSDKEKAVAKIEVDVYEALQ 158



 Score = 46.2 bits (108), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 42/68 (61%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVS G  T+N DS++ + A EA  ++ L     +  L++AQ   +SASS+  KA A+I
Sbjct: 90  KFFVSGGFATINPDSTLNVNAVEAFSLEELSLERVQAGLAEAQRNAASASSDKEKAVAKI 149

Query: 207 AVEVAEAL 214
            V+V EAL
Sbjct: 150 EVDVYEAL 157


>gi|116207208|ref|XP_001229413.1| hypothetical protein CHGG_02897 [Chaetomium globosum CBS 148.51]
 gi|88183494|gb|EAQ90962.1| hypothetical protein CHGG_02897 [Chaetomium globosum CBS 148.51]
          Length = 164

 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 53/140 (37%), Positives = 85/140 (60%), Gaps = 5/140 (3%)

Query: 12  LARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGV 67
           L RRGYA    D++  +L+  ++  Y +Q+  QV++P+ SG  G+L NHVP++  LK G+
Sbjct: 22  LQRRGYAEAVSDKIKLSLSLPHQSIYKSQDAVQVNIPAESGEMGVLANHVPSIEQLKAGI 81

Query: 68  ITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSA 127
           + V E  G S++ F+S G   V  +S++ I A E  P++   A A R  +S+AQ   + +
Sbjct: 82  VEVIEESG-SKRFFLSGGFAVVQPNSALSINAVEGFPLEDFSADAVRAQISEAQKVANGS 140

Query: 128 SSETAKAEAQIAVEVAEALK 147
            SE   AEA+I +EV E+L+
Sbjct: 141 GSEQDIAEAKIELEVLESLQ 160


>gi|149034586|gb|EDL89323.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit, isoform CRA_a [Rattus norvegicus]
          Length = 137

 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 47/85 (55%), Positives = 62/85 (72%)

Query: 62  ILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQ 121
           +L+PG++ V+  +G + K FVSSG++TVN DSSVQ++AEE   +D LD  AAR  L KAQ
Sbjct: 48  VLRPGLVVVHAEDGTTTKYFVSSGSVTVNADSSVQLLAEEVVTLDMLDLGAARANLEKAQ 107

Query: 122 SELSSASSETAKAEAQIAVEVAEAL 146
           SELS A+ E A+AE QI +E  EAL
Sbjct: 108 SELSGAADEAARAEIQIRIEANEAL 132



 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 44/71 (61%), Positives = 52/71 (73%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN DSSVQ++AEE   +D LD  AAR  L KAQSELS A+ E A+AE QI
Sbjct: 65  KYFVSSGSVTVNADSSVQLLAEEVVTLDMLDLGAARANLEKAQSELSGAADEAARAEIQI 124

Query: 207 AVEVAEALVAA 217
            +E  EALV A
Sbjct: 125 RIEANEALVKA 135


>gi|167522944|ref|XP_001745809.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775610|gb|EDQ89233.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1128

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/118 (47%), Positives = 71/118 (60%), Gaps = 10/118 (8%)

Query: 1    MAARLVTSAT-RLAR---RGYADQ-----MDFTLASGNKVFYTNQNVKQVDVPSFSGAFG 51
            MA R     T RLAR   R YAD      + FT  S +  FY    V+QV+VP+  G FG
Sbjct: 998  MALRHAARTTARLARPMLRTYADAAPAEAVSFTFTSASGTFYDQSPVQQVNVPALDGEFG 1057

Query: 52   ILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLD 109
            IL +HVP +A LKPGVI+V +  G +   FVSSG +TVN DSS Q++AEE   ++ LD
Sbjct: 1058 ILASHVPVVAALKPGVISVVDG-GSTASFFVSSGVVTVNADSSAQVVAEEVARLEDLD 1114



 Score = 38.1 bits (87), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 17/30 (56%), Positives = 22/30 (73%)

Query: 148  IFVSSGTITVNDDSSVQIIAEEAHPVDSLD 177
             FVSSG +TVN DSS Q++AEE   ++ LD
Sbjct: 1085 FFVSSGVVTVNADSSAQVVAEEVARLEDLD 1114


>gi|146411981|ref|XP_001481962.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
           6260]
          Length = 161

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/146 (36%), Positives = 82/146 (56%), Gaps = 8/146 (5%)

Query: 9   ATRLARRGYA-------DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLA 61
           ++ + RRGYA       D +  +LA  ++  Y+   V+QV++PS +G  GIL NH+P + 
Sbjct: 13  SSNIVRRGYATETTTGSDALKLSLALPHQTLYSESEVQQVNLPSINGDLGILANHIPIVE 72

Query: 62  ILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQ 121
            L+PG++ +    G +++ FVS G  TV   + + I A EA   D  DA A + +++ AQ
Sbjct: 73  QLRPGLLEIISKGGETEQYFVSGGIATVQPGNKLTISAIEAFKPDQFDALAVKQLIADAQ 132

Query: 122 SELSSASSETAKAEAQIAVEVAEALK 147
               S S E   AEA I +EV EAL+
Sbjct: 133 KRAGS-SDEVVVAEANIELEVLEALQ 157



 Score = 40.0 bits (92), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 38/76 (50%), Gaps = 1/76 (1%)

Query: 143 AEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKA 202
            E  + FVS G  TV   + + I A EA   D  DA A + +++ AQ    S S E   A
Sbjct: 86  GETEQYFVSGGIATVQPGNKLTISAIEAFKPDQFDALAVKQLIADAQKRAGS-SDEVVVA 144

Query: 203 EAQIAVEVAEALVAAA 218
           EA I +EV EAL   A
Sbjct: 145 EANIELEVLEALQGVA 160


>gi|255951366|ref|XP_002566450.1| Pc22g25650 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211593467|emb|CAP99853.1| Pc22g25650 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 156

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 49/133 (36%), Positives = 78/133 (58%), Gaps = 4/133 (3%)

Query: 14  RRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVIT 69
           RRGYA    D++  +L   ++  Y +  V QV++P+ SG  G+L NHVP++  LKPG++ 
Sbjct: 24  RRGYAEAVADKIKLSLTLPHQTIYRSTGVTQVNIPAASGEMGVLANHVPSIEQLKPGLVE 83

Query: 70  VYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASS 129
           + E  G +++ F+S G   V  DS + I A E  P++   A + R  +++AQ   S + S
Sbjct: 84  ILEESGATKQYFLSGGFAVVQPDSQLSINAVEGFPLEEFSADSIRAQIAEAQKIASGSGS 143

Query: 130 ETAKAEAQIAVEV 142
           E   AEA+I +EV
Sbjct: 144 EQDIAEAKIELEV 156


>gi|406602817|emb|CCH45593.1| hypothetical protein BN7_5176 [Wickerhamomyces ciferrii]
          Length = 160

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/141 (39%), Positives = 84/141 (59%), Gaps = 6/141 (4%)

Query: 12  LARRGYADQ-----MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPG 66
           ++RR YAD      +  +LA  +   ++++ V QV+VP  +G FGIL NHVP +  L+PG
Sbjct: 17  ISRRTYADAASADVLKLSLALPHATLFSSEQVTQVNVPGANGDFGILANHVPIIEQLRPG 76

Query: 67  VITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSS 126
           +I++ ET G +++ FVS G  TV   S++ I A EA    +  A A +  L++AQ  +++
Sbjct: 77  LISITETSGQTKEFFVSGGFATVQPGSTLSITAIEAFEPSAFSAEAVKTQLAEAQKNVNN 136

Query: 127 ASSETAKAEAQIAVEVAEALK 147
            S E   A A I VEV EAL+
Sbjct: 137 -SDEAIAATAAIQVEVLEALQ 156


>gi|325092896|gb|EGC46206.1| ATP synthase subunit delta [Ajellomyces capsulatus H88]
          Length = 216

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/140 (37%), Positives = 83/140 (59%), Gaps = 9/140 (6%)

Query: 12  LARRGYAD----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGV 67
           L RRGYAD    ++  +L+      Y + +V QV++P+ SG  G+L NHVP++  L PG+
Sbjct: 78  LQRRGYADAVADKLKLSLS-----IYKSTDVVQVNIPAESGVMGVLANHVPSIEQLNPGL 132

Query: 68  ITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSA 127
           + + E  G +++ F+S G   V  DS + I A EA+P++   A A +  +++AQ   S  
Sbjct: 133 VEIIEESGGTKQFFLSGGFAVVQPDSQLSINAVEAYPLEDFSAEAVKAQIAEAQKVASGG 192

Query: 128 SSETAKAEAQIAVEVAEALK 147
            SE   AEA+I +EV E+L+
Sbjct: 193 GSEQDIAEAKIELEVLESLQ 212



 Score = 44.7 bits (104), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 41/71 (57%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           + F+S G   V  DS + I A EA+P++   A A +  +++AQ   S   SE   AEA+I
Sbjct: 144 QFFLSGGFAVVQPDSQLSINAVEAYPLEDFSAEAVKAQIAEAQKVASGGGSEQDIAEAKI 203

Query: 207 AVEVAEALVAA 217
            +EV E+L AA
Sbjct: 204 ELEVLESLQAA 214


>gi|67515991|ref|XP_657881.1| hypothetical protein AN0277.2 [Aspergillus nidulans FGSC A4]
 gi|40746994|gb|EAA66150.1| hypothetical protein AN0277.2 [Aspergillus nidulans FGSC A4]
          Length = 660

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/157 (36%), Positives = 87/157 (55%), Gaps = 5/157 (3%)

Query: 1   MAARLVTSATRLARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNH 56
           + AR       L RRGYA    D++  +L   ++  + + +V QV++P+ SG  G+L NH
Sbjct: 12  LRARPAAFRVPLQRRGYAEAVNDKIKLSLVLPHQTIFRSTDVVQVNIPAESGEMGVLANH 71

Query: 57  VPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDV 116
           VP++  LKPG++ + E  G S+K F+S G   V  DS + I A E  P++   A   R  
Sbjct: 72  VPSIEQLKPGLVEIVEEGGASKKFFLSGGFAVVQPDSQLSINAVEGFPLEDFSAENVRAQ 131

Query: 117 LSKAQSELSSASSETAKAEAQIAVEVAEALKIFVSSG 153
           L++AQ   S   SE   AEA+I +E + A + FVS G
Sbjct: 132 LAEAQKIASGNGSEQDIAEAKIEIEGSLA-RQFVSLG 167


>gi|425766735|gb|EKV05334.1| ATP synthase delta chain, mitochondrial, putative [Penicillium
           digitatum Pd1]
 gi|425775257|gb|EKV13535.1| ATP synthase delta chain, mitochondrial, putative [Penicillium
           digitatum PHI26]
          Length = 165

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/141 (36%), Positives = 80/141 (56%), Gaps = 4/141 (2%)

Query: 14  RRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVIT 69
           RRGYA    D++  +L   ++  Y +  V QV++P+ SG  G+L NHVP +  LKPG++ 
Sbjct: 24  RRGYAEAVADKIKLSLTLPHQTIYRSTGVTQVNIPAASGEMGVLANHVPAIEQLKPGLVE 83

Query: 70  VYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASS 129
           + E  G +++ F+S G   V  DS + I A E   ++   A A R  +++AQ   S + S
Sbjct: 84  IIEESGATKQYFLSGGFAVVQPDSQLSINAVEGFALEDFSADAIRAQIAEAQKIASGSGS 143

Query: 130 ETAKAEAQIAVEVAEALKIFV 150
           E   AEA+I +EV E L+  V
Sbjct: 144 EQDIAEAKIELEVLETLQAHV 164


>gi|225677807|gb|EEH16091.1| ATP synthase delta chain [Paracoccidioides brasiliensis Pb03]
 gi|226287456|gb|EEH42969.1| ATP synthase delta chain [Paracoccidioides brasiliensis Pb18]
          Length = 165

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 83/140 (59%), Gaps = 4/140 (2%)

Query: 12  LARRGYAD----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGV 67
           L RR YAD    ++  +L   ++  Y + +V QV++P+ SG  GIL NHVP++  LKPG+
Sbjct: 22  LQRRAYADAVADKIKLSLVLPHESIYKSTDVIQVNIPAESGGMGILANHVPSIEQLKPGL 81

Query: 68  ITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSA 127
           + + E  G +++ F+S G   V  +S + I A E + +D   A A +  +++AQ   S +
Sbjct: 82  VEIIEESGGTKQFFLSGGFAIVQPNSQLSINAVEGYTLDQFSAEAVKSQIAEAQRIASGS 141

Query: 128 SSETAKAEAQIAVEVAEALK 147
            SE   AEA+I +EV E+L+
Sbjct: 142 GSEQDIAEAKIELEVLESLQ 161


>gi|344230589|gb|EGV62474.1| epsilon subunit of F1F0-ATP synthase N-terminal domain-containing
           protein [Candida tenuis ATCC 10573]
          Length = 159

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 82/141 (58%), Gaps = 6/141 (4%)

Query: 12  LARRGYA-----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPG 66
           +ARR YA     D +  +LA  ++  Y++  V+QV++PS +G  GIL NH+P +  L+PG
Sbjct: 16  VARRTYATEATSDALKLSLALPHQTLYSDSEVEQVNLPSVNGDLGILANHIPIVEQLRPG 75

Query: 67  VITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSS 126
           ++ +    G +++ FVS G  TV   + + I A EA   D  D +  ++++S AQ   SS
Sbjct: 76  LLEIISKGGETEQYFVSGGIATVQPGNKLTISAIEAFKPDQFDVNEVKNLISDAQKRASS 135

Query: 127 ASSETAKAEAQIAVEVAEALK 147
            S E   AEA I +EV EAL+
Sbjct: 136 -SDEVEAAEASIELEVLEALQ 155



 Score = 40.0 bits (92), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)

Query: 143 AEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKA 202
            E  + FVS G  TV   + + I A EA   D  D +  ++++S AQ   SS S E   A
Sbjct: 84  GETEQYFVSGGIATVQPGNKLTISAIEAFKPDQFDVNEVKNLISDAQKRASS-SDEVEAA 142

Query: 203 EAQIAVEVAEAL 214
           EA I +EV EAL
Sbjct: 143 EASIELEVLEAL 154


>gi|393217450|gb|EJD02939.1| epsilon subunit of F1F0-ATP synthase N-terminal domain-containing
           protein [Fomitiporia mediterranea MF3/22]
          Length = 164

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/137 (37%), Positives = 83/137 (60%), Gaps = 3/137 (2%)

Query: 14  RRGYA---DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITV 70
           +RGYA   D++  +L   ++  + + +V QV++ + +G  GIL NHVP++  L+PGV+ V
Sbjct: 23  QRGYAEAADKIKLSLVLPHQTLFASTDVVQVNIAAATGDMGILANHVPSIEPLRPGVVEV 82

Query: 71  YETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
            E+   SQK FVS G   V+ ++ + I A EA P++   + A R  L++AQ   S   SE
Sbjct: 83  IESGNNSQKWFVSGGFANVHPNNKLTINAVEAAPLEDFSSEAIRANLTEAQRIASGNGSE 142

Query: 131 TAKAEAQIAVEVAEALK 147
             KAEAQ+ + V E+L+
Sbjct: 143 EDKAEAQVEISVYESLQ 159



 Score = 43.1 bits (100), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 39/68 (57%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVS G   V+ ++ + I A EA P++   + A R  L++AQ   S   SE  KAEAQ+
Sbjct: 91  KWFVSGGFANVHPNNKLTINAVEAAPLEDFSSEAIRANLTEAQRIASGNGSEEDKAEAQV 150

Query: 207 AVEVAEAL 214
            + V E+L
Sbjct: 151 EISVYESL 158


>gi|380488586|emb|CCF37276.1| ATP synthase subunit delta [Colletotrichum higginsianum]
          Length = 165

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 85/140 (60%), Gaps = 4/140 (2%)

Query: 12  LARRGYAD----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGV 67
           L RR YAD    ++  +L+  ++  Y +Q+V QV++P+ SG  G+L NHVP++  LK G+
Sbjct: 22  LQRRTYADAVPDKIKLSLSLPHQAIYKSQDVVQVNIPAESGDMGVLANHVPSIEQLKSGL 81

Query: 68  ITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSA 127
           + V E  G +++ F+S G   V  +S + I A E +P++   A   + ++++AQ   S +
Sbjct: 82  VEVIEESGPNKQFFLSGGFAVVQPNSVLSINATEGYPIEDFSAETVKSLIAEAQKVASGS 141

Query: 128 SSETAKAEAQIAVEVAEALK 147
            SE   AEA++ +EV E+L+
Sbjct: 142 GSEQDVAEAKVELEVLESLQ 161



 Score = 40.8 bits (94), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 40/70 (57%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           + F+S G   V  +S + I A E +P++   A   + ++++AQ   S + SE   AEA++
Sbjct: 93  QFFLSGGFAVVQPNSVLSINATEGYPIEDFSAETVKSLIAEAQKVASGSGSEQDVAEAKV 152

Query: 207 AVEVAEALVA 216
            +EV E+L A
Sbjct: 153 ELEVLESLQA 162


>gi|331229697|ref|XP_003327514.1| ATP synthase F1, epsilon subunit [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309306504|gb|EFP83095.1| ATP synthase F1, epsilon subunit [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 176

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/131 (41%), Positives = 79/131 (60%), Gaps = 1/131 (0%)

Query: 16  GYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEG 75
           G   ++  +L   ++  Y +  V QV++ + SG  G+L NHV ++  LKPGV+ V E +G
Sbjct: 42  GSDGKLQLSLVLPHETIYQSSGVTQVNIAAESGDMGVLANHVASIESLKPGVVEVIEGQG 101

Query: 76  VSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAE 135
            S+K FVS G   V+ ++ + I A EA+P+D+    AAR  L +AQ  LS+  SE  KAE
Sbjct: 102 DSKKWFVSGGFANVHPNNLLTINAVEAYPLDAFSPEAARSALQEAQRALSTG-SEVQKAE 160

Query: 136 AQIAVEVAEAL 146
           A I VEV E+L
Sbjct: 161 AAIEVEVFESL 171



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 45/71 (63%), Gaps = 1/71 (1%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVS G   V+ ++ + I A EA+P+D+    AAR  L +AQ  LS+  SE  KAEA I
Sbjct: 105 KWFVSGGFANVHPNNLLTINAVEAYPLDAFSPEAARSALQEAQRALSTG-SEVQKAEAAI 163

Query: 207 AVEVAEALVAA 217
            VEV E+L+AA
Sbjct: 164 EVEVFESLLAA 174


>gi|15237998|ref|NP_199514.1| ATP synthase subunit delta' [Arabidopsis thaliana]
 gi|2493045|sp|Q96252.1|ATP4_ARATH RecName: Full=ATP synthase subunit delta', mitochondrial; AltName:
           Full=F-ATPase delta' subunit; Flags: Precursor
 gi|13430526|gb|AAK25885.1|AF360175_1 putative ATP synthase delta chain, mitochondrial precursor
           [Arabidopsis thaliana]
 gi|1655484|dbj|BAA13601.1| delta-prime subunit of mitochondrial F1-ATPase [Arabidopsis
           thaliana]
 gi|9759445|dbj|BAB10242.1| ATP synthase delta' chain, mitochondrial precursor [Arabidopsis
           thaliana]
 gi|15810621|gb|AAL07198.1| putative ATP synthase delta chain, mitochondrial precursor
           [Arabidopsis thaliana]
 gi|332008076|gb|AED95459.1| ATP synthase subunit delta' [Arabidopsis thaliana]
          Length = 203

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/113 (44%), Positives = 76/113 (67%), Gaps = 1/113 (0%)

Query: 34  TNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDS 93
           T + V  V +P+ +G  G+LP HVPT+A LKPG+++V+E   V +K F+SSG   ++ +S
Sbjct: 86  TGKEVDMVIIPASTGQMGVLPGHVPTIAELKPGIMSVHEGTDV-KKYFLSSGFAFLHANS 144

Query: 94  SVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
              IIA EA P+D +D S  +  L++ Q +L+SA+++  KAEAQI VEV  A+
Sbjct: 145 VADIIAVEAVPLDHIDPSQVQKGLAEFQQKLASATTDLEKAEAQIGVEVHSAI 197



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/73 (45%), Positives = 48/73 (65%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K F+SSG   ++ +S   IIA EA P+D +D S  +  L++ Q +L+SA+++  KAEAQI
Sbjct: 130 KYFLSSGFAFLHANSVADIIAVEAVPLDHIDPSQVQKGLAEFQQKLASATTDLEKAEAQI 189

Query: 207 AVEVAEALVAAAS 219
            VEV  A+ AA S
Sbjct: 190 GVEVHSAINAALS 202


>gi|367027342|ref|XP_003662955.1| hypothetical protein MYCTH_2079768 [Myceliophthora thermophila ATCC
           42464]
 gi|347010224|gb|AEO57710.1| hypothetical protein MYCTH_2079768 [Myceliophthora thermophila ATCC
           42464]
          Length = 164

 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 84/140 (60%), Gaps = 5/140 (3%)

Query: 12  LARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGV 67
           L RRGYA    D++  +L+  ++  Y +Q+  QV++P+ SG  G+L +HVP++  LKPG+
Sbjct: 22  LQRRGYAEAVSDKIKLSLSLPHQSIYKSQDAVQVNIPAVSGDMGVLAHHVPSIEQLKPGI 81

Query: 68  ITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSA 127
           + V E  G +++ F+S G   V  +S++ I A E +P++     A R  +++AQ   +  
Sbjct: 82  VEVIEESG-TKRFFLSGGFAVVQPNSALSINAVEGYPLEDFSPEAVRAQIAEAQKVANGN 140

Query: 128 SSETAKAEAQIAVEVAEALK 147
            SE   AEA+I +EV E L+
Sbjct: 141 GSEQDIAEAKIELEVLETLQ 160


>gi|115472191|ref|NP_001059694.1| Os07g0495200 [Oryza sativa Japonica Group]
 gi|24059902|dbj|BAC21366.1| putative ATP synthase delta' chain, mitochondrial precursor [Oryza
           sativa Japonica Group]
 gi|50509197|dbj|BAD30401.1| putative ATP synthase delta' chain, mitochondrial precursor [Oryza
           sativa Japonica Group]
 gi|113611230|dbj|BAF21608.1| Os07g0495200 [Oryza sativa Japonica Group]
 gi|125558408|gb|EAZ03944.1| hypothetical protein OsI_26080 [Oryza sativa Indica Group]
 gi|215678594|dbj|BAG92249.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 205

 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/127 (42%), Positives = 82/127 (64%), Gaps = 3/127 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           ++F L   +++   N+ V  V VP+ +G  G+LP HV T+A LKPGV++V+E   ++ K 
Sbjct: 77  VNFVLPYKSEI--ANKEVDMVIVPATTGQMGVLPGHVSTIAELKPGVLSVHEGNDIT-KY 133

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           FVSSG   V+ +S   I+A EA P+D +D +A +  L++  ++L SAS+E  KAEAQI V
Sbjct: 134 FVSSGFAFVHANSIADIVAVEAVPLDQIDPAAVQQGLAEFNAKLGSASTELEKAEAQIGV 193

Query: 141 EVAEALK 147
           +V  AL 
Sbjct: 194 DVHSALN 200



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 47/71 (66%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG   V+ +S   I+A EA P+D +D +A +  L++  ++L SAS+E  KAEAQI
Sbjct: 132 KYFVSSGFAFVHANSIADIVAVEAVPLDQIDPAAVQQGLAEFNAKLGSASTELEKAEAQI 191

Query: 207 AVEVAEALVAA 217
            V+V  AL AA
Sbjct: 192 GVDVHSALNAA 202


>gi|297794529|ref|XP_002865149.1| ATP synthase delta [Arabidopsis lyrata subsp. lyrata]
 gi|297310984|gb|EFH41408.1| ATP synthase delta [Arabidopsis lyrata subsp. lyrata]
          Length = 203

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 50/113 (44%), Positives = 76/113 (67%), Gaps = 1/113 (0%)

Query: 34  TNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDS 93
           T + V  V +P+ +G  G+LP HVPT+A LKPG+++V+E   V +K F+SSG   ++ +S
Sbjct: 86  TGKEVDMVIIPASTGQMGVLPGHVPTIAELKPGIMSVHEGTDV-KKYFLSSGFAFLHANS 144

Query: 94  SVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
              IIA EA P+D +D S  +  L++ Q +L+SA+++  KAEAQI VEV  A+
Sbjct: 145 VADIIAVEAVPLDHIDPSQVQKGLAEFQQKLASATTDLEKAEAQIGVEVHSAI 197



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/73 (45%), Positives = 48/73 (65%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K F+SSG   ++ +S   IIA EA P+D +D S  +  L++ Q +L+SA+++  KAEAQI
Sbjct: 130 KYFLSSGFAFLHANSVADIIAVEAVPLDHIDPSQVQKGLAEFQQKLASATTDLEKAEAQI 189

Query: 207 AVEVAEALVAAAS 219
            VEV  A+ AA S
Sbjct: 190 GVEVHSAINAALS 202


>gi|303274831|ref|XP_003056730.1| H+-or Na+-translocating f-type, v-type and A-type ATPase
           superfamily [Micromonas pusilla CCMP1545]
 gi|226461082|gb|EEH58375.1| H+-or Na+-translocating f-type, v-type and A-type ATPase
           superfamily [Micromonas pusilla CCMP1545]
          Length = 213

 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 49/128 (38%), Positives = 78/128 (60%)

Query: 19  DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQ 78
           ++M       +++ + +  V QV +P+ SG FG+LP HVPT+A L+PGV++V      +Q
Sbjct: 79  EKMTLNFYMPHEIQFKDAEVDQVMIPATSGDFGVLPGHVPTVAQLRPGVVSVQLNSSETQ 138

Query: 79  KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 138
           K FVSSG   V+ +S   I+A EA P++ LD +A +  L+   ++L +A  +  KA AQI
Sbjct: 139 KYFVSSGFAFVHANSVTDIMAVEAIPLEQLDDAAVKKGLADFNNKLVNAKDDYEKAAAQI 198

Query: 139 AVEVAEAL 146
            +EV  A+
Sbjct: 199 GIEVCGAM 206



 Score = 45.8 bits (107), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 43/72 (59%)

Query: 143 AEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKA 202
           +E  K FVSSG   V+ +S   I+A EA P++ LD +A +  L+   ++L +A  +  KA
Sbjct: 135 SETQKYFVSSGFAFVHANSVTDIMAVEAIPLEQLDDAAVKKGLADFNNKLVNAKDDYEKA 194

Query: 203 EAQIAVEVAEAL 214
            AQI +EV  A+
Sbjct: 195 AAQIGIEVCGAM 206


>gi|118484950|gb|ABK94340.1| unknown [Populus trichocarpa]
          Length = 207

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 51/126 (40%), Positives = 82/126 (65%), Gaps = 3/126 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           ++F L   +++  T++ V  V +P+ +G  G+LP HVPT+A LKPGV++V+E   V +K 
Sbjct: 79  VNFVLPYASEL--TSKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVHEGNDV-KKY 135

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           F+SSG + V+ +S   I+  EA P+D +D +  +  L+    +LSSA++E  KAEAQI +
Sbjct: 136 FLSSGFVFVHANSVADIVVVEAVPIDHIDQNLVQKGLADFTQKLSSATTELEKAEAQIGI 195

Query: 141 EVAEAL 146
           +V  AL
Sbjct: 196 DVHSAL 201



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 45/71 (63%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K F+SSG + V+ +S   I+  EA P+D +D +  +  L+    +LSSA++E  KAEAQI
Sbjct: 134 KYFLSSGFVFVHANSVADIVVVEAVPIDHIDQNLVQKGLADFTQKLSSATTELEKAEAQI 193

Query: 207 AVEVAEALVAA 217
            ++V  AL +A
Sbjct: 194 GIDVHSALNSA 204


>gi|295663535|ref|XP_002792320.1| ATP synthase delta chain [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226278990|gb|EEH34556.1| ATP synthase delta chain [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 165

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 83/140 (59%), Gaps = 4/140 (2%)

Query: 12  LARRGYAD----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGV 67
           L  R YAD    ++  +L   ++  Y + +V QV++P+ SGA GIL NHVP++  LKPG+
Sbjct: 22  LQWRAYADAVADKIKLSLVLPHESIYKSTDVIQVNIPAESGAMGILANHVPSIEQLKPGL 81

Query: 68  ITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSA 127
           + + E  G +++ F+S G   V  +S + I A E + +D   A A +  +++AQ   S +
Sbjct: 82  VEIIEESGGTKQFFLSGGFAIVQPNSQLSINAVEGYTLDQFSAEAVKSQIAEAQRIASGS 141

Query: 128 SSETAKAEAQIAVEVAEALK 147
            SE   AEA+I +EV E+L+
Sbjct: 142 GSEQDIAEAKIELEVLESLQ 161


>gi|366996667|ref|XP_003678096.1| hypothetical protein NCAS_0I00830 [Naumovozyma castellii CBS 4309]
 gi|342303967|emb|CCC71751.1| hypothetical protein NCAS_0I00830 [Naumovozyma castellii CBS 4309]
          Length = 168

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 85/146 (58%), Gaps = 11/146 (7%)

Query: 12  LARRGYADQ--------MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAIL 63
           +ARR YA+         +    A  ++  Y    VKQV++P+ SG  GIL NH+PT+  L
Sbjct: 20  IARRTYAEHAASTIGNALRLQFALPHETLYEGAEVKQVNLPAKSGRIGILANHIPTVEQL 79

Query: 64  KPGVITVYETEGVSQ--KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQ 121
           +PG++ ++     ++  K F+S G  T+  DS++ + A EA P+DS      +++L++A+
Sbjct: 80  EPGIVEIFTNANNNEVKKFFISGGFATMQPDSTLCVTAVEAFPLDSFSQENVKNLLTEAK 139

Query: 122 SELSSASSETAKAEAQIAVEVAEALK 147
            +L++  S T  AEAQI + + E+L+
Sbjct: 140 KDLNNTDS-TIAAEAQIKINLLESLE 164



 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 1/74 (1%)

Query: 144 EALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAE 203
           E  K F+S G  T+  DS++ + A EA P+DS      +++L++A+ +L++  S T  AE
Sbjct: 94  EVKKFFISGGFATMQPDSTLCVTAVEAFPLDSFSQENVKNLLTEAKKDLNNTDS-TIAAE 152

Query: 204 AQIAVEVAEALVAA 217
           AQI + + E+L AA
Sbjct: 153 AQIKINLLESLEAA 166


>gi|149235065|ref|XP_001523411.1| ATP synthase delta chain, mitochondrial precursor [Lodderomyces
           elongisporus NRRL YB-4239]
 gi|146452820|gb|EDK47076.1| ATP synthase delta chain, mitochondrial precursor [Lodderomyces
           elongisporus NRRL YB-4239]
          Length = 160

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 52/140 (37%), Positives = 80/140 (57%), Gaps = 7/140 (5%)

Query: 14  RRGYA------DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGV 67
           RR YA      D +  +LA   +  Y++Q+V+QV++PS +G  GIL NH+P +  L+PG+
Sbjct: 18  RRSYATEAAASDALKLSLALPYQTLYSDQDVQQVNLPSVNGDLGILANHIPVVEQLRPGL 77

Query: 68  ITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSA 127
           + V    G S++ FVS G   V   + + I A EA   +  D +A ++++S AQ    S 
Sbjct: 78  LEVILKNGESEQYFVSGGLAMVQPGNKLTISAIEAFKPEDFDVNAVKNMISDAQKRAESG 137

Query: 128 SSETAKAEAQIAVEVAEALK 147
             + A AEA I +EV EAL+
Sbjct: 138 DEKVA-AEASIELEVLEALQ 156



 Score = 37.0 bits (84), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 1/78 (1%)

Query: 137 QIAVEVAEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS 196
           ++ ++  E+ + FVS G   V   + + I A EA   +  D +A ++++S AQ    S  
Sbjct: 79  EVILKNGESEQYFVSGGLAMVQPGNKLTISAIEAFKPEDFDVNAVKNMISDAQKRAESGD 138

Query: 197 SETAKAEAQIAVEVAEAL 214
            + A AEA I +EV EAL
Sbjct: 139 EKVA-AEASIELEVLEAL 155


>gi|224126387|ref|XP_002329541.1| predicted protein [Populus trichocarpa]
 gi|222870250|gb|EEF07381.1| predicted protein [Populus trichocarpa]
          Length = 187

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 51/126 (40%), Positives = 82/126 (65%), Gaps = 3/126 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           ++F L   +++  T++ V  V +P+ +G  G+LP HVPT+A LKPGV++V+E   V +K 
Sbjct: 59  VNFVLPYASEL--TSKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVHEGNDV-KKY 115

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           F+SSG + V+ +S   I+  EA P+D +D +  +  L+    +LSSA++E  KAEAQI +
Sbjct: 116 FLSSGFVFVHANSVADIVVVEAVPIDHIDQNLVQKGLADFTQKLSSATTELEKAEAQIGI 175

Query: 141 EVAEAL 146
           +V  AL
Sbjct: 176 DVHSAL 181



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 45/71 (63%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K F+SSG + V+ +S   I+  EA P+D +D +  +  L+    +LSSA++E  KAEAQI
Sbjct: 114 KYFLSSGFVFVHANSVADIVVVEAVPIDHIDQNLVQKGLADFTQKLSSATTELEKAEAQI 173

Query: 207 AVEVAEALVAA 217
            ++V  AL +A
Sbjct: 174 GIDVHSALNSA 184


>gi|344303435|gb|EGW33684.1| ATP synthase delta subunit [Spathaspora passalidarum NRRL Y-27907]
          Length = 159

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 53/151 (35%), Positives = 84/151 (55%), Gaps = 7/151 (4%)

Query: 2   AARLVTSATRLARRGYA------DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPN 55
           A R V   + + RR YA      D +  +LA  ++  Y++  V+QV++PS +G  GIL N
Sbjct: 5   ALRQVAKQSTVVRRTYATEAVASDALKLSLALPHQTLYSDSEVEQVNLPSVNGDLGILAN 64

Query: 56  HVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARD 115
           H+P +  L+PG++ +    G +++ FVS G  TV   + + I A EA   + +D  A ++
Sbjct: 65  HIPIVEQLRPGLLEIISKTGETEQYFVSGGIATVQPGNKLTISAIEAFKPEQIDTHAVKN 124

Query: 116 VLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           +++ AQ    S S E   AEA I +EV EAL
Sbjct: 125 LIADAQKRAES-SDEVVAAEATIELEVLEAL 154



 Score = 37.4 bits (85), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 1/78 (1%)

Query: 137 QIAVEVAEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS 196
           +I  +  E  + FVS G  TV   + + I A EA   + +D  A +++++ AQ    S S
Sbjct: 78  EIISKTGETEQYFVSGGIATVQPGNKLTISAIEAFKPEQIDTHAVKNLIADAQKRAES-S 136

Query: 197 SETAKAEAQIAVEVAEAL 214
            E   AEA I +EV EAL
Sbjct: 137 DEVVAAEATIELEVLEAL 154


>gi|308807473|ref|XP_003081047.1| putative ATP synthase delta chain, mitochondrial prec (ISS)
           [Ostreococcus tauri]
 gi|116059509|emb|CAL55216.1| putative ATP synthase delta chain, mitochondrial prec (ISS)
           [Ostreococcus tauri]
          Length = 210

 Score = 89.7 bits (221), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 71/110 (64%), Gaps = 3/110 (2%)

Query: 40  QVD---VPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQ 96
           QVD   VP+ +G FG+LP HVPT++ L+PGV++V+ ++   Q+ FVS G   V+ DS+  
Sbjct: 94  QVDMVLVPATTGDFGVLPGHVPTVSQLRPGVVSVHVSDKDVQRYFVSGGFCFVHADSTTD 153

Query: 97  IIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           I A EA PV+ LD  A +  L++ Q++ ++A  +  KA AQI ++   A+
Sbjct: 154 ICAVEAVPVEQLDPEAVKKGLAEHQAKFANAKDDVEKAHAQIGIDCCNAM 203



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 43/71 (60%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           + FVS G   V+ DS+  I A EA PV+ LD  A +  L++ Q++ ++A  +  KA AQI
Sbjct: 136 RYFVSGGFCFVHADSTTDICAVEAVPVEQLDPEAVKKGLAEHQAKFANAKDDVEKAHAQI 195

Query: 207 AVEVAEALVAA 217
            ++   A+V+A
Sbjct: 196 GIDCCNAMVSA 206


>gi|322702172|gb|EFY93920.1| ATP synthase delta chain precursor [Metarhizium acridum CQMa 102]
          Length = 155

 Score = 89.7 bits (221), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 51/133 (38%), Positives = 79/133 (59%), Gaps = 6/133 (4%)

Query: 14  RRGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYET 73
           RR YA+      A  +K  Y +Q+V QV++P+ SG  G+L NHVP++  LKPG++ V E 
Sbjct: 24  RRTYAE------AVPDKSIYRSQDVVQVNIPAESGEMGVLANHVPSIEQLKPGIVEVVEE 77

Query: 74  EGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAK 133
              S++ F++ G  TV  DS++ I + E +P++   A A R  +++AQ     + SE   
Sbjct: 78  SAGSKQFFLAGGFATVQPDSTMSINSIEGYPLEDFSAEAIRAGIAEAQKVAGGSGSEQDI 137

Query: 134 AEAQIAVEVAEAL 146
           AEA+I +EV E L
Sbjct: 138 AEAKIELEVLETL 150


>gi|345564685|gb|EGX47645.1| hypothetical protein AOL_s00083g153 [Arthrobotrys oligospora ATCC
           24927]
          Length = 169

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 80/139 (57%), Gaps = 5/139 (3%)

Query: 14  RRGYA-----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVI 68
           RRGYA     D++  +L+  ++  Y   +V QV++P+ SG  G+L NHVP++  LK G++
Sbjct: 26  RRGYAEAVTSDKIKLSLSLPHQAIYKATDVVQVNIPAESGVMGVLANHVPSIEQLKAGIV 85

Query: 69  TVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS 128
            + E  G +++ FVS G   V  +S + I A EA+ +D     A +  L++A    S + 
Sbjct: 86  DIIEEGGANKQFFVSGGFAVVQPNSRLSINAVEAYTLDEFSLDAVKSQLAEANKIASGSG 145

Query: 129 SETAKAEAQIAVEVAEALK 147
           SE   AEA+I VEV E L+
Sbjct: 146 SEQDIAEAKIEVEVLETLQ 164



 Score = 39.3 bits (90), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 38/71 (53%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           + FVS G   V  +S + I A EA+ +D     A +  L++A    S + SE   AEA+I
Sbjct: 96  QFFVSGGFAVVQPNSRLSINAVEAYTLDEFSLDAVKSQLAEANKIASGSGSEQDIAEAKI 155

Query: 207 AVEVAEALVAA 217
            VEV E L AA
Sbjct: 156 EVEVLETLQAA 166


>gi|50410163|ref|XP_456939.1| DEHA2A14014p [Debaryomyces hansenii CBS767]
 gi|49652603|emb|CAG84917.1| DEHA2A14014p [Debaryomyces hansenii CBS767]
          Length = 160

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 52/140 (37%), Positives = 79/140 (56%), Gaps = 7/140 (5%)

Query: 14  RRGYA------DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGV 67
           RR YA      D +  +LA  ++  Y+   V+QV++PS +G  GIL NH+P +  L+PG+
Sbjct: 18  RRNYATEAATSDALKLSLALPHQTLYSESEVEQVNLPSINGDLGILANHIPIVEQLRPGL 77

Query: 68  ITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSA 127
           + +    G +++ FVS G  TV   + + I A EA   +  DA A + +++ AQ   SS 
Sbjct: 78  LEIISKGGETEQYFVSGGIATVQPGNKLTISAIEAFKPEQFDAQAVKSLIADAQKRASS- 136

Query: 128 SSETAKAEAQIAVEVAEALK 147
           S E   AEA I +EV EAL+
Sbjct: 137 SDEVVVAEANIELEVLEALQ 156



 Score = 39.3 bits (90), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 1/76 (1%)

Query: 143 AEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKA 202
            E  + FVS G  TV   + + I A EA   +  DA A + +++ AQ   SS S E   A
Sbjct: 85  GETEQYFVSGGIATVQPGNKLTISAIEAFKPEQFDAQAVKSLIADAQKRASS-SDEVVVA 143

Query: 203 EAQIAVEVAEALVAAA 218
           EA I +EV EAL   A
Sbjct: 144 EANIELEVLEALQGVA 159


>gi|255575798|ref|XP_002528798.1| ATP synthase delta chain, mitochondrial, putative [Ricinus
           communis]
 gi|223531801|gb|EEF33620.1| ATP synthase delta chain, mitochondrial, putative [Ricinus
           communis]
          Length = 204

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 50/113 (44%), Positives = 75/113 (66%), Gaps = 1/113 (0%)

Query: 34  TNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDS 93
           + + V  V +P+ +G  G+LP HVPT+A LKPG+++V+E   V+ K F+SSG   ++ +S
Sbjct: 87  STKEVDMVIMPATTGQMGVLPGHVPTIAELKPGILSVHEGNDVT-KYFLSSGFAFIHANS 145

Query: 94  SVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
              IIA EA PVD +D S  +  L++   +LSSA+++  KAEAQI V+V  AL
Sbjct: 146 VADIIAVEAVPVDHIDPSLVQKGLAEFTQKLSSATTDLEKAEAQIGVDVHSAL 198



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/71 (45%), Positives = 46/71 (64%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K F+SSG   ++ +S   IIA EA PVD +D S  +  L++   +LSSA+++  KAEAQI
Sbjct: 131 KYFLSSGFAFIHANSVADIIAVEAVPVDHIDPSLVQKGLAEFTQKLSSATTDLEKAEAQI 190

Query: 207 AVEVAEALVAA 217
            V+V  AL +A
Sbjct: 191 GVDVHSALNSA 201


>gi|449432356|ref|XP_004133965.1| PREDICTED: ATP synthase subunit delta', mitochondrial-like [Cucumis
           sativus]
 gi|449519178|ref|XP_004166612.1| PREDICTED: ATP synthase subunit delta', mitochondrial-like [Cucumis
           sativus]
          Length = 200

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 49/111 (44%), Positives = 75/111 (67%), Gaps = 1/111 (0%)

Query: 36  QNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSV 95
           + V  V +P+ +G  G+LP HVPT+A LKPGV++V+E   + +K FVSSG   ++ +S  
Sbjct: 85  KEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVHEGSEI-KKYFVSSGFAFIHGNSYA 143

Query: 96  QIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
            IIA EA P++ +DA+  +  L++   +L+SAS++  KAEAQI V+V  AL
Sbjct: 144 DIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSAL 194



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/77 (42%), Positives = 50/77 (64%)

Query: 141 EVAEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETA 200
           E +E  K FVSSG   ++ +S   IIA EA P++ +DA+  +  L++   +L+SAS++  
Sbjct: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180

Query: 201 KAEAQIAVEVAEALVAA 217
           KAEAQI V+V  AL +A
Sbjct: 181 KAEAQIGVDVHSALNSA 197


>gi|223945333|gb|ACN26750.1| unknown [Zea mays]
 gi|414590341|tpg|DAA40912.1| TPA: ATP synthase delta chain [Zea mays]
          Length = 203

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 55/126 (43%), Positives = 81/126 (64%), Gaps = 3/126 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           ++F L   +++   N+ V  V VP+ +G  G+LP HV T+A LKPGV++V+E   VS K 
Sbjct: 75  VNFVLPYKSEI--ANKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVHEGNDVS-KY 131

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           FVSSG   V+ +S   I+A EA PVD +D +  +  L++  ++L SAS++  KAEAQI V
Sbjct: 132 FVSSGFAFVHANSIADIVAVEAIPVDQIDPALVQKGLAEFTAKLGSASTDLEKAEAQIGV 191

Query: 141 EVAEAL 146
           +V  AL
Sbjct: 192 DVHSAL 197



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/71 (46%), Positives = 46/71 (64%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG   V+ +S   I+A EA PVD +D +  +  L++  ++L SAS++  KAEAQI
Sbjct: 130 KYFVSSGFAFVHANSIADIVAVEAIPVDQIDPALVQKGLAEFTAKLGSASTDLEKAEAQI 189

Query: 207 AVEVAEALVAA 217
            V+V  AL AA
Sbjct: 190 GVDVHSALNAA 200


>gi|328858207|gb|EGG07320.1| hypothetical protein MELLADRAFT_35471 [Melampsora larici-populina
           98AG31]
          Length = 139

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 51/126 (40%), Positives = 80/126 (63%), Gaps = 1/126 (0%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           ++  +L   ++  +++  V QV++ + SG  G+L NHV ++  LKPGV+ V E +G S+K
Sbjct: 15  KLQLSLVLPHETIFSSSGVTQVNIAAESGDMGVLANHVASIESLKPGVVEVIENQGDSKK 74

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 139
            FVS G   V+ ++S+ I A EA+P+++  A AAR  L +AQ  LS+  +E  KAEA + 
Sbjct: 75  WFVSGGFANVHPNNSLTINAVEAYPLEAFSAEAARAGLQEAQRALSTG-TEAQKAEAAVE 133

Query: 140 VEVAEA 145
           VEV EA
Sbjct: 134 VEVFEA 139



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 1/67 (1%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVS G   V+ ++S+ I A EA+P+++  A AAR  L +AQ  LS+  +E  KAEA +
Sbjct: 74  KWFVSGGFANVHPNNSLTINAVEAYPLEAFSAEAARAGLQEAQRALSTG-TEAQKAEAAV 132

Query: 207 AVEVAEA 213
            VEV EA
Sbjct: 133 EVEVFEA 139


>gi|443919042|gb|ELU39337.1| ATP synthase, delta/Epsilon chain, beta-sandwich domain-containing
           protein [Rhizoctonia solani AG-1 IA]
          Length = 175

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 87/144 (60%), Gaps = 8/144 (5%)

Query: 12  LARRGYAD----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGV 67
           + RRGYAD     +  +L   ++  +T+ NV QV++ + SG  GIL NHVPT+  L+PGV
Sbjct: 27  IQRRGYADAASDTLKLSLVLPHQSIFTSANVVQVNIAAESGDMGILANHVPTVEPLRPGV 86

Query: 68  ITVYETEGVSQKIFVSSGTIT----VNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSE 123
           + V ET   S+K F     IT    ++ ++++ I A EA P++ + A A R  L++AQ  
Sbjct: 87  VEVIETGSGSKKWFGELLNITAPESLHPNNTLTINAIEAAPLEDISAEAVRANLAEAQRV 146

Query: 124 LSSASSETAKAEAQIAVEVAEALK 147
           L  ++S+  KAEA+I  +V EA++
Sbjct: 147 LGGSASDKEKAEARIEADVYEAIQ 170


>gi|255718953|ref|XP_002555757.1| KLTH0G16632p [Lachancea thermotolerans]
 gi|238937141|emb|CAR25320.1| KLTH0G16632p [Lachancea thermotolerans CBS 6340]
          Length = 214

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 81/147 (55%), Gaps = 6/147 (4%)

Query: 5   LVTSATRLARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTL 60
           L+ S   + RR YA    D +    A  ++  +    V QV++P+ SG  GIL NHVPT+
Sbjct: 66  LLRSVNTIGRRTYAEAAGDFLKLQFALPHQTLFAGSKVTQVNLPAQSGQVGILANHVPTV 125

Query: 61  AILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKA 120
             L  GV+ V+E    S+K FVS G  TV  DS++ I + EA P+DS      R ++++A
Sbjct: 126 EQLSAGVVEVFEGSS-SKKFFVSGGFATVQPDSTLSINSVEAFPLDSFSQENVRSLVAEA 184

Query: 121 QSELSSASSETAKAEAQIAVEVAEALK 147
               SS S E   AEA I +EV EAL+
Sbjct: 185 NKNASS-SDEKVAAEAAIQLEVLEALQ 210



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/81 (44%), Positives = 45/81 (55%), Gaps = 4/81 (4%)

Query: 140 VEVAEA---LKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS 196
           VEV E     K FVS G  TV  DS++ I + EA P+DS      R ++++A    SS S
Sbjct: 133 VEVFEGSSSKKFFVSGGFATVQPDSTLSINSVEAFPLDSFSQENVRSLVAEANKNASS-S 191

Query: 197 SETAKAEAQIAVEVAEALVAA 217
            E   AEA I +EV EAL AA
Sbjct: 192 DEKVAAEAAIQLEVLEALQAA 212


>gi|354545659|emb|CCE42386.1| hypothetical protein CPAR2_200290 [Candida parapsilosis]
          Length = 161

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/141 (36%), Positives = 79/141 (56%), Gaps = 8/141 (5%)

Query: 14  RRGYA-------DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPG 66
           RR YA       D +  +LA   +  Y +  V+QV++PS +G  GIL NH+P +  L+PG
Sbjct: 18  RRTYATEAAPSSDALKLSLALPFQTLYADSEVEQVNLPSVNGDLGILANHIPIVEQLRPG 77

Query: 67  VITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSS 126
           ++ +    G +++ FVS G   V   + + I A EA   D +DASA +++++ AQ    S
Sbjct: 78  LLEIISKGGETEQYFVSGGIAMVQPGNKLTISAIEAFKPDQIDASAVKNLIADAQKRAES 137

Query: 127 ASSETAKAEAQIAVEVAEALK 147
              ET  AEA I +EV EAL+
Sbjct: 138 G-DETVAAEANIELEVLEALQ 157



 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 1/72 (1%)

Query: 143 AEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKA 202
            E  + FVS G   V   + + I A EA   D +DASA +++++ AQ    S   ET  A
Sbjct: 86  GETEQYFVSGGIAMVQPGNKLTISAIEAFKPDQIDASAVKNLIADAQKRAESG-DETVAA 144

Query: 203 EAQIAVEVAEAL 214
           EA I +EV EAL
Sbjct: 145 EANIELEVLEAL 156


>gi|198476972|ref|XP_002136824.1| GA28703, partial [Drosophila pseudoobscura pseudoobscura]
 gi|198145149|gb|EDY71853.1| GA28703, partial [Drosophila pseudoobscura pseudoobscura]
          Length = 96

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/77 (58%), Positives = 60/77 (77%), Gaps = 1/77 (1%)

Query: 57  VPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDV 116
           VPT A+LKPGV+ V + +G + K FVSSG++TVN+DSSVQ++AEEAH V  +D + AR +
Sbjct: 3   VPT-AVLKPGVVQVVDNDGKTTKYFVSSGSVTVNEDSSVQVLAEEAHNVADIDVAEARQL 61

Query: 117 LSKAQSELSSASSETAK 133
           LSK QS+LSSA  + AK
Sbjct: 62  LSKYQSQLSSAGDDKAK 78



 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/72 (68%), Positives = 59/72 (81%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN+DSSVQ++AEEAH V  +D + AR +LSK QS+LSSA  + AKAEA I
Sbjct: 24  KYFVSSGSVTVNEDSSVQVLAEEAHNVADIDVAEARQLLSKYQSQLSSAGDDKAKAEAAI 83

Query: 207 AVEVAEALVAAA 218
           AVEVAEALV AA
Sbjct: 84  AVEVAEALVKAA 95


>gi|448524841|ref|XP_003869023.1| subunit of the mitochondrial F1F0 ATP synthase [Candida
           orthopsilosis Co 90-125]
 gi|380353376|emb|CCG22886.1| subunit of the mitochondrial F1F0 ATP synthase [Candida
           orthopsilosis]
          Length = 161

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/141 (36%), Positives = 79/141 (56%), Gaps = 8/141 (5%)

Query: 14  RRGYA-------DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPG 66
           RR YA       D +  +LA   +  Y +  V+QV++PS +G  GIL NH+P +  L+PG
Sbjct: 18  RRTYATEAAPSSDALKLSLALPFQTLYADSEVEQVNLPSVNGDLGILANHIPIVEQLRPG 77

Query: 67  VITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSS 126
           ++ +    G +++ FVS G   V   + + I A EA   D +DASA +++++ AQ    S
Sbjct: 78  LLEIISKGGETEQYFVSGGIAMVQPGNKLTISAIEAFKPDQIDASAVKNLIADAQKRAES 137

Query: 127 ASSETAKAEAQIAVEVAEALK 147
              ET  AEA I +EV EAL+
Sbjct: 138 G-DETVAAEANIELEVLEALQ 157



 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 1/72 (1%)

Query: 143 AEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKA 202
            E  + FVS G   V   + + I A EA   D +DASA +++++ AQ    S   ET  A
Sbjct: 86  GETEQYFVSGGIAMVQPGNKLTISAIEAFKPDQIDASAVKNLIADAQKRAESG-DETVAA 144

Query: 203 EAQIAVEVAEAL 214
           EA I +EV EAL
Sbjct: 145 EANIELEVLEAL 156


>gi|126276303|ref|XP_001386981.1| ATP synthase delta subunit [Scheffersomyces stipitis CBS 6054]
 gi|126212850|gb|EAZ62958.1| ATP synthase delta subunit [Scheffersomyces stipitis CBS 6054]
          Length = 161

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 79/140 (56%), Gaps = 8/140 (5%)

Query: 14  RRGYA-------DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPG 66
           RR YA       D +  +LA  ++  Y+   V+QV++PS +G  GIL NH+P +  L+PG
Sbjct: 18  RRSYATEASTASDALKLSLALPHQTLYSESEVEQVNLPSVNGDLGILANHIPIVEQLRPG 77

Query: 67  VITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSS 126
           ++ +    G +++ FVS G  TV   + + I A EA   D  DA A +++++ AQ   +S
Sbjct: 78  LLEIISKGGETEQYFVSGGIATVQPGNKLTISAIEAFKPDQFDAQAVKNLIADAQKRAAS 137

Query: 127 ASSETAKAEAQIAVEVAEAL 146
            + E   AEA I +EV EAL
Sbjct: 138 -TDEVVVAEANIELEVLEAL 156



 Score = 40.0 bits (92), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 1/72 (1%)

Query: 143 AEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKA 202
            E  + FVS G  TV   + + I A EA   D  DA A +++++ AQ   +S + E   A
Sbjct: 86  GETEQYFVSGGIATVQPGNKLTISAIEAFKPDQFDAQAVKNLIADAQKRAAS-TDEVVVA 144

Query: 203 EAQIAVEVAEAL 214
           EA I +EV EAL
Sbjct: 145 EANIELEVLEAL 156


>gi|119720786|gb|ABL97963.1| hydrogen-transporting ATP synthase [Brassica rapa]
          Length = 203

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/126 (40%), Positives = 83/126 (65%), Gaps = 3/126 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           ++F L   +++  + + V  V +P+ +G  G+LP HVPT+A LKPG+++V+E   + +K 
Sbjct: 75  VNFVLPYASEL--SGKEVDMVIIPATTGQMGVLPGHVPTIAELKPGIMSVHEGTDI-KKY 131

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           FVSSG   ++ +S   IIA EA P++++DAS  +  L+    +L+SAS++  KAEAQI V
Sbjct: 132 FVSSGFAFLHANSVADIIAVEAVPLENIDASQVQKGLADFTQKLASASTDLEKAEAQIGV 191

Query: 141 EVAEAL 146
           EV  A+
Sbjct: 192 EVHSAM 197



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/73 (46%), Positives = 48/73 (65%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG   ++ +S   IIA EA P++++DAS  +  L+    +L+SAS++  KAEAQI
Sbjct: 130 KYFVSSGFAFLHANSVADIIAVEAVPLENIDASQVQKGLADFTQKLASASTDLEKAEAQI 189

Query: 207 AVEVAEALVAAAS 219
            VEV  A+ AA S
Sbjct: 190 GVEVHSAMNAALS 202


>gi|388580021|gb|EIM20339.1| putative ATP synthase delta chain mitochondrial precursor [Wallemia
           sebi CBS 633.66]
          Length = 159

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/152 (36%), Positives = 87/152 (57%), Gaps = 7/152 (4%)

Query: 2   AARLVTSATRLARRGYA------DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPN 55
           A R      R+A R YA      D++    A  ++  Y ++ V QV VP+ +G  GIL +
Sbjct: 5   AFRGAVQVPRIASRAYASEAGAADKLKLKFALPHETLYQDKEVIQVSVPAETGEMGILSH 64

Query: 56  HVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARD 115
           HVP++  LK GV+ V E  G S+K F+SSG  +V+ ++++ I A EA  + + D SA + 
Sbjct: 65  HVPSVEALKSGVVEVIEAAGQSKKYFISSGFASVHPNNTLTINAVEAFELSAFDKSAIKQ 124

Query: 116 VLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
            +  AQ +L ++ SE  KAEA+I ++V   L+
Sbjct: 125 GIQDAQ-KLKASGSEVEKAEAEIELDVYSELE 155


>gi|339251848|ref|XP_003372946.1| putative ATP synthase F1, epsilon subunit [Trichinella spiralis]
 gi|316968689|gb|EFV52942.1| putative ATP synthase F1, epsilon subunit [Trichinella spiralis]
          Length = 107

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/110 (46%), Positives = 66/110 (60%), Gaps = 17/110 (15%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           +KQV VP+  G  GI PNHVP + +LKPGV+ VYE + + +K FVSSGT+++N+DSSVQ 
Sbjct: 7   IKQVSVPTIDGEVGIYPNHVPLIGVLKPGVMRVYEQDMI-RKFFVSSGTVSINEDSSVQ- 64

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSE-LSSASSETAKAEAQIAVEVAEAL 146
                         A    L K +S+    A+ E A AE  IAVEV EAL
Sbjct: 65  --------------ACESGLEKMKSQSHGGATDEKAAAENAIAVEVYEAL 100



 Score = 44.7 bits (104), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 32/73 (43%), Positives = 39/73 (53%), Gaps = 16/73 (21%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSE-LSSASSETAKAEAQ 205
           K FVSSGT+++N+DSSVQ               A    L K +S+    A+ E A AE  
Sbjct: 47  KFFVSSGTVSINEDSSVQ---------------ACESGLEKMKSQSHGGATDEKAAAENA 91

Query: 206 IAVEVAEALVAAA 218
           IAVEV EALV A 
Sbjct: 92  IAVEVYEALVQAC 104


>gi|125600310|gb|EAZ39886.1| hypothetical protein OsJ_24324 [Oryza sativa Japonica Group]
          Length = 202

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/110 (46%), Positives = 73/110 (66%), Gaps = 1/110 (0%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V  V VP+ +G  G+LP HV T+A LKPGV++V+E   ++ K FVSSG   V+ +S   I
Sbjct: 89  VDMVIVPATTGQMGVLPGHVSTIAELKPGVLSVHEGNDIT-KYFVSSGFAFVHANSIADI 147

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
           +A EA P+D +D +A +  L++  ++L SAS+E  KAEAQI V+V  AL 
Sbjct: 148 VAVEAVPLDQIDPAAVQQGLAEFNAKLGSASTELEKAEAQIGVDVHSALN 197



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 47/71 (66%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG   V+ +S   I+A EA P+D +D +A +  L++  ++L SAS+E  KAEAQI
Sbjct: 129 KYFVSSGFAFVHANSIADIVAVEAVPLDQIDPAAVQQGLAEFNAKLGSASTELEKAEAQI 188

Query: 207 AVEVAEALVAA 217
            V+V  AL AA
Sbjct: 189 GVDVHSALNAA 199


>gi|410077255|ref|XP_003956209.1| hypothetical protein KAFR_0C00790 [Kazachstania africana CBS 2517]
 gi|372462793|emb|CCF57074.1| hypothetical protein KAFR_0C00790 [Kazachstania africana CBS 2517]
          Length = 158

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 80/140 (57%), Gaps = 6/140 (4%)

Query: 12  LARRGYAD-----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPG 66
           +A+R YA+      +    A  ++  Y   NV QV+VP  SG FG+L NHVPT+  L PG
Sbjct: 16  IAKRMYAEAAAIGTLKLHFALPHETLYYGSNVTQVNVPGKSGKFGVLANHVPTIEQLSPG 75

Query: 67  VITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSS 126
           ++ + E    S+K ++S G  +V  DS + + A EA P++       + +LS+A+++++S
Sbjct: 76  IVEIIEESSKSKKYYISGGFASVQPDSLLCVTAVEAFPLEQFSPDKVKTLLSEARNKVTS 135

Query: 127 ASSETAKAEAQIAVEVAEAL 146
           +  + A AE +I V + E L
Sbjct: 136 SDGKVA-AENKIKVSILEEL 154


>gi|226509388|ref|NP_001147558.1| ATP synthase delta chain [Zea mays]
 gi|195612184|gb|ACG27922.1| ATP synthase delta chain [Zea mays]
          Length = 203

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/126 (42%), Positives = 81/126 (64%), Gaps = 3/126 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           ++F L   +++   N+ V  V VP+ +G  G+LP HV T+A LKPGV++V+E   VS K 
Sbjct: 75  VNFVLPYKSEI--ANKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVHEGNDVS-KY 131

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           FVSSG   V+ +S   I+A EA PVD +D +  +  L++  ++L +AS++  KAEAQI V
Sbjct: 132 FVSSGFAFVHANSIADIVAVEAIPVDQIDPALVQKGLAEFTAKLGAASTDLEKAEAQIGV 191

Query: 141 EVAEAL 146
           +V  AL
Sbjct: 192 DVHSAL 197



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/71 (45%), Positives = 46/71 (64%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG   V+ +S   I+A EA PVD +D +  +  L++  ++L +AS++  KAEAQI
Sbjct: 130 KYFVSSGFAFVHANSIADIVAVEAIPVDQIDPALVQKGLAEFTAKLGAASTDLEKAEAQI 189

Query: 207 AVEVAEALVAA 217
            V+V  AL AA
Sbjct: 190 GVDVHSALNAA 200


>gi|241959642|ref|XP_002422540.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Candida dubliniensis CD36]
 gi|223645885|emb|CAX40548.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Candida dubliniensis CD36]
          Length = 161

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/132 (36%), Positives = 77/132 (58%), Gaps = 1/132 (0%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           +D +  +LA  ++  Y +  V+QV++PS +G  GIL NH+P +  L+PG++ +    G S
Sbjct: 29  SDALKLSLALPHQTLYNDSEVQQVNLPSVNGDLGILANHIPIVEQLRPGLLEIISKNGDS 88

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
            + FVS G   V   + + I A EA   D +D SA +++++ AQ   + +S E   AEA 
Sbjct: 89  DQYFVSGGIAMVQPGNKLTISAIEAFKTDQIDISAVKNLIADAQKR-AESSDEKVAAEAN 147

Query: 138 IAVEVAEALKIF 149
           I +EV EAL+ F
Sbjct: 148 IELEVLEALQHF 159



 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           + FVS G   V   + + I A EA   D +D SA +++++ AQ   + +S E   AEA I
Sbjct: 90  QYFVSGGIAMVQPGNKLTISAIEAFKTDQIDISAVKNLIADAQKR-AESSDEKVAAEANI 148

Query: 207 AVEVAEAL 214
            +EV EAL
Sbjct: 149 ELEVLEAL 156


>gi|66826947|ref|XP_646828.1| ATP synthase F1 delta [Dictyostelium discoideum AX4]
 gi|74859142|sp|Q55F42.1|ATPD_DICDI RecName: Full=ATP synthase subunit delta, mitochondrial; AltName:
           Full=F-ATPase delta subunit; Flags: Precursor
 gi|60475172|gb|EAL73108.1| ATP synthase F1 delta [Dictyostelium discoideum AX4]
          Length = 170

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 71/129 (55%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           +D + F+L S ++  Y ++  + V +P   G FG+  NHVP +A LKPGVI +    G  
Sbjct: 34  SDLLTFSLLSPHQTIYKDKKAQLVTLPGAKGIFGVAKNHVPRIAELKPGVIQINHENGDL 93

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           +K F+S G   VN D+S  I   EA P+D LDA   ++ L++     + A  E AKA A 
Sbjct: 94  EKFFISGGFAFVNPDASCYINTIEAVPIDQLDAEEVKNGLARYTQLYNDAQEENAKAVAL 153

Query: 138 IAVEVAEAL 146
           I +E  + +
Sbjct: 154 IGLETYQQM 162



 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 41/83 (49%)

Query: 137 QIAVEVAEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS 196
           QI  E  +  K F+S G   VN D+S  I   EA P+D LDA   ++ L++     + A 
Sbjct: 85  QINHENGDLEKFFISGGFAFVNPDASCYINTIEAVPIDQLDAEEVKNGLARYTQLYNDAQ 144

Query: 197 SETAKAEAQIAVEVAEALVAAAS 219
            E AKA A I +E  + +  A  
Sbjct: 145 EENAKAVALIGLETYQQMAFACG 167


>gi|448082781|ref|XP_004195220.1| Piso0_005767 [Millerozyma farinosa CBS 7064]
 gi|359376642|emb|CCE87224.1| Piso0_005767 [Millerozyma farinosa CBS 7064]
          Length = 160

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 83/151 (54%), Gaps = 10/151 (6%)

Query: 3   ARLVTSATRLARRGYADQ------MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNH 56
           +R  TSATR   R YA +      +  +LA  ++  YT   V+QV+VPS +G  GIL NH
Sbjct: 10  SRQATSATR---RTYATEAASSGALKLSLALPHQTLYTENEVEQVNVPSINGDLGILANH 66

Query: 57  VPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDV 116
           +P +  L+PG++ +    G +++ FVS G   V   + + I A EA   +  D  A + +
Sbjct: 67  IPIVEQLRPGLLEIISKGGQTEQYFVSGGIAAVQPGNKLTISAIEAFKPEQFDLEAVKSL 126

Query: 117 LSKAQSELSSASSETAKAEAQIAVEVAEALK 147
           ++ AQ   +S S E   AEA I +EV EAL+
Sbjct: 127 IADAQKRAAS-SDEVVAAEANIELEVLEALQ 156


>gi|448087374|ref|XP_004196312.1| Piso0_005767 [Millerozyma farinosa CBS 7064]
 gi|359377734|emb|CCE86117.1| Piso0_005767 [Millerozyma farinosa CBS 7064]
          Length = 160

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 83/151 (54%), Gaps = 10/151 (6%)

Query: 3   ARLVTSATRLARRGYADQ------MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNH 56
           +R  TSATR   R YA +      +  +LA  ++  YT   V+QV+VPS +G  GIL NH
Sbjct: 10  SRQATSATR---RTYATEAANSGALKLSLALPHQTLYTENEVEQVNVPSINGDLGILANH 66

Query: 57  VPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDV 116
           +P +  L+PG++ +    G +++ FVS G   V   + + I A EA   +  D  A + +
Sbjct: 67  IPIVEQLRPGLLEIISKGGQTEQYFVSGGIAAVQPGNKLTISAIEAFKPEQFDLEAVKSL 126

Query: 117 LSKAQSELSSASSETAKAEAQIAVEVAEALK 147
           ++ AQ   +S S E   AEA I +EV EAL+
Sbjct: 127 IADAQKRAAS-SDEVVAAEANIELEVLEALQ 156


>gi|260943874|ref|XP_002616235.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
 gi|238849884|gb|EEQ39348.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
          Length = 160

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 81/145 (55%), Gaps = 7/145 (4%)

Query: 9   ATRLARRGYA------DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAI 62
           +T + RR YA      D +  +LA  ++  Y+   V+QV++PS +G  GIL NH+P +  
Sbjct: 13  STNVVRRTYATEASGSDALKLSLALPHQTLYSESEVQQVNLPSVNGDLGILANHIPIVEQ 72

Query: 63  LKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQS 122
           L+PG++ +    G +++ FVS G  TV   + + I A EA   +  DA   + +++ AQ 
Sbjct: 73  LRPGLLEIISKGGETEQYFVSGGIATVQPGNKLTISAIEAFKPEQFDAQEIKSLIADAQK 132

Query: 123 ELSSASSETAKAEAQIAVEVAEALK 147
             SS S E   AEA I +EV EAL+
Sbjct: 133 RASS-SDEVVVAEANIELEVLEALQ 156



 Score = 37.0 bits (84), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 1/72 (1%)

Query: 143 AEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKA 202
            E  + FVS G  TV   + + I A EA   +  DA   + +++ AQ   SS S E   A
Sbjct: 85  GETEQYFVSGGIATVQPGNKLTISAIEAFKPEQFDAQEIKSLIADAQKRASS-SDEVVVA 143

Query: 203 EAQIAVEVAEAL 214
           EA I +EV EAL
Sbjct: 144 EANIELEVLEAL 155


>gi|212274417|ref|NP_001130528.1| uncharacterized protein LOC100191627 [Zea mays]
 gi|194689388|gb|ACF78778.1| unknown [Zea mays]
 gi|195657677|gb|ACG48306.1| ATP synthase delta chain [Zea mays]
 gi|414886787|tpg|DAA62801.1| TPA: ATP synthase delta chain [Zea mays]
          Length = 203

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/126 (42%), Positives = 81/126 (64%), Gaps = 3/126 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           ++F L   +++   N+ V  V VP+ +G  G+LP HV T+A LKPGV++V+E   V+ K 
Sbjct: 75  VNFVLPYKSEI--ANKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVHEGNDVT-KY 131

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           FVSSG   V+ +S   I+A EA PVD +D +  +  L++  ++L SAS++  KAEAQI V
Sbjct: 132 FVSSGFAFVHANSIADIVAVEAVPVDQIDPAFVQKGLAEFTAKLGSASTDLEKAEAQIGV 191

Query: 141 EVAEAL 146
           +V  AL
Sbjct: 192 DVHSAL 197



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/71 (46%), Positives = 46/71 (64%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG   V+ +S   I+A EA PVD +D +  +  L++  ++L SAS++  KAEAQI
Sbjct: 130 KYFVSSGFAFVHANSIADIVAVEAVPVDQIDPAFVQKGLAEFTAKLGSASTDLEKAEAQI 189

Query: 207 AVEVAEALVAA 217
            V+V  AL AA
Sbjct: 190 GVDVHSALNAA 200


>gi|296412659|ref|XP_002836040.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629840|emb|CAZ80197.1| unnamed protein product [Tuber melanosporum]
          Length = 167

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 81/147 (55%), Gaps = 6/147 (4%)

Query: 7   TSATRLARRGYA------DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTL 60
           T A    RR YA      D++  +LA  ++  Y   +V QV++P+ SG  GIL NHVP++
Sbjct: 17  TRALLAPRRNYAEAAGPADKIRLSLALPHQTIYKASDVIQVNIPAESGDMGILANHVPSI 76

Query: 61  AILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKA 120
             L+PGVI + E    S++ F+S G   V  DS + I A EA P++     A R  +++A
Sbjct: 77  EQLRPGVIDIIEEGAGSKQFFLSGGFAVVQPDSQLSINAVEAFPLEDFSPEAVRAQIAEA 136

Query: 121 QSELSSASSETAKAEAQIAVEVAEALK 147
           Q   + + +E    EA++ +EV E L+
Sbjct: 137 QRIANGSGTEQDIVEAKVELEVLETLQ 163


>gi|255088485|ref|XP_002506165.1| H+-or Na+-translocating f-type, v-type and A-type ATPase
           superfamily [Micromonas sp. RCC299]
 gi|226521436|gb|ACO67423.1| H+-or Na+-translocating f-type, v-type and A-type ATPase
           superfamily [Micromonas sp. RCC299]
          Length = 214

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 74/119 (62%)

Query: 29  NKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTIT 88
           +++ Y    V  + +P+ +G  G+LP HVPT+A L+PGV+ V   +  ++K FVSSG   
Sbjct: 89  HEIEYEGAEVDSIQLPAVTGDMGVLPGHVPTVAQLRPGVVAVNMDDKETKKYFVSSGFAF 148

Query: 89  VNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
           V+ +S   ++A EA PV+ LD  A +  L+  Q++L +A  +  KA AQI +EV +A++
Sbjct: 149 VHANSVTDVMAVEAVPVEQLDGEAVKKALADYQAKLVNAKDDYEKAAAQIGIEVTQAME 207



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 46/76 (60%)

Query: 144 EALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAE 203
           E  K FVSSG   V+ +S   ++A EA PV+ LD  A +  L+  Q++L +A  +  KA 
Sbjct: 136 ETKKYFVSSGFAFVHANSVTDVMAVEAVPVEQLDGEAVKKALADYQAKLVNAKDDYEKAA 195

Query: 204 AQIAVEVAEALVAAAS 219
           AQI +EV +A+ +A +
Sbjct: 196 AQIGIEVTQAMESAVT 211


>gi|254577143|ref|XP_002494558.1| ZYRO0A04312p [Zygosaccharomyces rouxii]
 gi|238937447|emb|CAR25625.1| ZYRO0A04312p [Zygosaccharomyces rouxii]
          Length = 159

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/152 (37%), Positives = 85/152 (55%), Gaps = 8/152 (5%)

Query: 2   AARLVT-SATRLARRGYA-----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPN 55
           AAR +T S   +A+R YA     D +    A  ++  +    V QV++P+ SG  GIL N
Sbjct: 6   AARTLTKSVNAVAKRTYAEAAANDFLKLKFALPHETLFAGTKVTQVNLPAKSGGVGILAN 65

Query: 56  HVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARD 115
           HVPT+  L PGV+ ++E    ++K FVS G  +V  DS++ + + EA P++S      + 
Sbjct: 66  HVPTVEQLSPGVVEIFEGAN-TKKYFVSGGFASVQPDSTLCVTSVEAFPLESFSQENVKS 124

Query: 116 VLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
           ++S A   LSS S E   A A I +EV EAL+
Sbjct: 125 LISDANKNLSS-SDEKVAATAAIQLEVLEALQ 155



 Score = 43.5 bits (101), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 1/77 (1%)

Query: 141 EVAEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETA 200
           E A   K FVS G  +V  DS++ + + EA P++S      + ++S A   LSS S E  
Sbjct: 82  EGANTKKYFVSGGFASVQPDSTLCVTSVEAFPLESFSQENVKSLISDANKNLSS-SDEKV 140

Query: 201 KAEAQIAVEVAEALVAA 217
            A A I +EV EAL AA
Sbjct: 141 AATAAIQLEVLEALQAA 157


>gi|242129050|gb|ACS83604.1| ATP synthase delta subunit 3 [Gossypium hirsutum]
          Length = 201

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/112 (44%), Positives = 75/112 (66%), Gaps = 1/112 (0%)

Query: 35  NQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSS 94
            + V  V VP+ +G  G+LP HV T+A LKPGV++V+E   ++ K FVSSG + ++ +S 
Sbjct: 85  TKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVHEGSEMT-KYFVSSGFVFIHANSF 143

Query: 95  VQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
             IIA EA P+D LD +  +  L++  S+LSSA+++  KAEAQI ++V  AL
Sbjct: 144 ADIIAVEAVPLDRLDVNLVQKGLAEFTSKLSSATTDLEKAEAQIGIDVHSAL 195



 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/77 (44%), Positives = 51/77 (66%)

Query: 141 EVAEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETA 200
           E +E  K FVSSG + ++ +S   IIA EA P+D LD +  +  L++  S+LSSA+++  
Sbjct: 122 EGSEMTKYFVSSGFVFIHANSFADIIAVEAVPLDRLDVNLVQKGLAEFTSKLSSATTDLE 181

Query: 201 KAEAQIAVEVAEALVAA 217
           KAEAQI ++V  AL +A
Sbjct: 182 KAEAQIGIDVHSALNSA 198


>gi|326476328|gb|EGE00338.1| ATP synthase F1 epsilon subunit [Trichophyton tonsurans CBS 112818]
 gi|326481202|gb|EGE05212.1| ATP synthase F1 epsilon subunit [Trichophyton equinum CBS 127.97]
          Length = 165

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 82/140 (58%), Gaps = 4/140 (2%)

Query: 12  LARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGV 67
           L++R YA    D++  +L    +  Y + +V QV++ + SG  GIL +HVP++  L+PG+
Sbjct: 22  LSQRTYATAVADKLKLSLVLPKETIYKSADVVQVNIAAESGDMGILSSHVPSIEQLRPGL 81

Query: 68  ITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSA 127
           I + E  G ++K F++ G   +  DS++ I A E  P+D+  A   +  L++AQ   S  
Sbjct: 82  IEIIEEGGQTKKFFLAGGFAVMQPDSNLNINAVEGFPLDAFSADNVKSQLAEAQRLASGT 141

Query: 128 SSETAKAEAQIAVEVAEALK 147
            SE   AEA+I VEV E+L+
Sbjct: 142 GSEKEIAEAKIQVEVLESLQ 161



 Score = 45.1 bits (105), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 44/81 (54%)

Query: 137 QIAVEVAEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS 196
           +I  E  +  K F++ G   +  DS++ I A E  P+D+  A   +  L++AQ   S   
Sbjct: 83  EIIEEGGQTKKFFLAGGFAVMQPDSNLNINAVEGFPLDAFSADNVKSQLAEAQRLASGTG 142

Query: 197 SETAKAEAQIAVEVAEALVAA 217
           SE   AEA+I VEV E+L A+
Sbjct: 143 SEKEIAEAKIQVEVLESLQAS 163


>gi|1843635|gb|AAC15908.1| ATP synthase F1 deta subunit [Kluyveromyces lactis]
          Length = 158

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/142 (40%), Positives = 82/142 (57%), Gaps = 7/142 (4%)

Query: 10  TRLARRGYADQMD----FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKP 65
           T +A+R YA+  D       A  ++  ++   V QV++P+ SG  GIL NHVPT+  L P
Sbjct: 16  TVVAKRTYAEAADGALKLQFALPHQTLFSGTPVTQVNLPAKSGQIGILANHVPTVEQLVP 75

Query: 66  GVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELS 125
           GV+ V E  G S+K FVS G  TV  DS++ I + EA P++S      R +L++AQ  +S
Sbjct: 76  GVVEVLE--GSSKKFFVSGGFATVQPDSTLAITSVEAFPLESFSPENVRSLLAEAQKNVS 133

Query: 126 SASSETAKAEAQIAVEVAEALK 147
           SA    A   A I +EV EAL+
Sbjct: 134 SADEVAAAEAA-IQLEVLEALQ 154



 Score = 44.3 bits (103), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 3/80 (3%)

Query: 140 VEVAEA--LKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASS 197
           VEV E    K FVS G  TV  DS++ I + EA P++S      R +L++AQ  +SSA  
Sbjct: 78  VEVLEGSSKKFFVSGGFATVQPDSTLAITSVEAFPLESFSPENVRSLLAEAQKNVSSADE 137

Query: 198 ETAKAEAQIAVEVAEALVAA 217
             A   A I +EV EAL AA
Sbjct: 138 VAAAEAA-IQLEVLEALQAA 156


>gi|242129048|gb|ACS83603.1| ATP synthase delta subunit 2 [Gossypium hirsutum]
          Length = 201

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/111 (45%), Positives = 72/111 (64%), Gaps = 1/111 (0%)

Query: 36  QNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSV 95
           + V  V VP+ +G  GILP HVPT+A LKPG+++V+E   V+ K F+SSG   ++ +S  
Sbjct: 86  KEVDMVIVPATTGQMGILPGHVPTIAELKPGILSVHEGNDVT-KYFLSSGFALIHANSVA 144

Query: 96  QIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
            IIA EA PVD LD +  +  L+    +L SA+++  KAEAQI V+V  A+
Sbjct: 145 DIIAVEAVPVDRLDPALVQKGLADFTQKLVSATTDLEKAEAQIGVDVHSAM 195



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/71 (42%), Positives = 44/71 (61%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K F+SSG   ++ +S   IIA EA PVD LD +  +  L+    +L SA+++  KAEAQI
Sbjct: 128 KYFLSSGFALIHANSVADIIAVEAVPVDRLDPALVQKGLADFTQKLVSATTDLEKAEAQI 187

Query: 207 AVEVAEALVAA 217
            V+V  A+ +A
Sbjct: 188 GVDVHSAMNSA 198


>gi|242045722|ref|XP_002460732.1| hypothetical protein SORBIDRAFT_02g033950 [Sorghum bicolor]
 gi|241924109|gb|EER97253.1| hypothetical protein SORBIDRAFT_02g033950 [Sorghum bicolor]
          Length = 203

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 52/112 (46%), Positives = 73/112 (65%), Gaps = 1/112 (0%)

Query: 35  NQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSS 94
           N+ V  V VP+ +G  G+LP HV T+A LKPGV++V+E   V+ K FVSSG   V+ +S 
Sbjct: 87  NKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVHEGNDVT-KYFVSSGFAFVHANSI 145

Query: 95  VQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
             I+A EA PVD +D +  +  L+   ++L SAS++  KAEAQI V+V  AL
Sbjct: 146 ADIVAVEAVPVDQIDPALVQKGLADFTAKLGSASTDLEKAEAQIGVDVHSAL 197



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/71 (46%), Positives = 45/71 (63%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG   V+ +S   I+A EA PVD +D +  +  L+   ++L SAS++  KAEAQI
Sbjct: 130 KYFVSSGFAFVHANSIADIVAVEAVPVDQIDPALVQKGLADFTAKLGSASTDLEKAEAQI 189

Query: 207 AVEVAEALVAA 217
            V+V  AL AA
Sbjct: 190 GVDVHSALNAA 200


>gi|71005168|ref|XP_757250.1| hypothetical protein UM01103.1 [Ustilago maydis 521]
 gi|46096829|gb|EAK82062.1| hypothetical protein UM01103.1 [Ustilago maydis 521]
          Length = 168

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/121 (41%), Positives = 73/121 (60%), Gaps = 5/121 (4%)

Query: 13  ARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVI 68
           ARRGYA    D++  +    ++  Y +  V QV++ S +G  GIL +HVP +  L+PGV+
Sbjct: 25  ARRGYAEAVSDKLKLSFILPHEAIYNSTEVTQVNIASSTGDMGILASHVPAVEELRPGVL 84

Query: 69  TVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS 128
            V E+ G S+K FVS G  TV+ ++ + + A EA+P+D   A A R  LS+AQ   SS S
Sbjct: 85  EVVESSG-SKKWFVSGGFATVHPNNKLVVNAIEAYPLDQFSAEAVRSALSEAQRVASSGS 143

Query: 129 S 129
           S
Sbjct: 144 S 144



 Score = 42.7 bits (99), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 37/78 (47%), Positives = 49/78 (62%)

Query: 140 VEVAEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSET 199
           VE + + K FVS G  TV+ ++ + + A EA+P+D   A A R  LS+AQ   SS SS  
Sbjct: 87  VESSGSKKWFVSGGFATVHPNNKLVVNAIEAYPLDQFSAEAVRSALSEAQRVASSGSSAE 146

Query: 200 AKAEAQIAVEVAEALVAA 217
           AKAEA+I +EV  AL AA
Sbjct: 147 AKAEAEIEIEVYTALQAA 164


>gi|357122753|ref|XP_003563079.1| PREDICTED: ATP synthase subunit delta', mitochondrial-like
           [Brachypodium distachyon]
          Length = 206

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 51/112 (45%), Positives = 73/112 (65%), Gaps = 1/112 (0%)

Query: 35  NQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSS 94
           N+ V  + VP+ +G  GILP HV T+A LKPGV++V+E   V+ K FVSSG   V+ +S 
Sbjct: 90  NKEVDMIMVPATTGLMGILPGHVSTIAELKPGVLSVHEGNDVT-KYFVSSGFAFVHANSI 148

Query: 95  VQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
             ++A EA P+D +D S  +  L+   ++L SAS++  KAEAQI V+V  AL
Sbjct: 149 TDVVAVEAVPLDQIDQSLVQKGLADFTAKLGSASTDLEKAEAQIGVDVHSAL 200



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/71 (45%), Positives = 45/71 (63%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG   V+ +S   ++A EA P+D +D S  +  L+   ++L SAS++  KAEAQI
Sbjct: 133 KYFVSSGFAFVHANSITDVVAVEAVPLDQIDQSLVQKGLADFTAKLGSASTDLEKAEAQI 192

Query: 207 AVEVAEALVAA 217
            V+V  AL AA
Sbjct: 193 GVDVHSALNAA 203


>gi|68473261|ref|XP_719436.1| hypothetical protein CaO19.7678 [Candida albicans SC5314]
 gi|46441253|gb|EAL00552.1| hypothetical protein CaO19.7678 [Candida albicans SC5314]
 gi|238880446|gb|EEQ44084.1| ATP synthase delta chain, mitochondrial precursor [Candida albicans
           WO-1]
          Length = 161

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 80/143 (55%), Gaps = 8/143 (5%)

Query: 14  RRGYA-------DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPG 66
           +R YA       D +  +LA  ++  Y +  V+QV++PS +G  GIL NH+P +  L+PG
Sbjct: 18  KRTYATEAAVSTDALKLSLALPHQTLYNDSEVQQVNLPSVNGDLGILANHIPIVEQLRPG 77

Query: 67  VITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSS 126
           ++ +    G S + FVS G   V   + + I A EA   D +D SA +++++ AQ   + 
Sbjct: 78  LLEIISKNGDSDQYFVSGGIAMVQPGNKLTISAIEAFKTDQIDLSAVKNLIADAQKR-AE 136

Query: 127 ASSETAKAEAQIAVEVAEALKIF 149
           +S E   AEA I +EV +AL+ F
Sbjct: 137 SSDEKVAAEANIELEVLDALQHF 159


>gi|350580769|ref|XP_003480894.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like [Sus
           scrofa]
          Length = 137

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 44/85 (51%), Positives = 61/85 (71%)

Query: 62  ILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQ 121
           +L+PG++ V+  +G + K FVSSG++TVN DSSVQ++AEEA  +D LD   A+  L KAQ
Sbjct: 48  VLRPGLVVVHAEDGTTSKYFVSSGSVTVNADSSVQLLAEEAVTLDMLDPGVAKANLEKAQ 107

Query: 122 SELSSASSETAKAEAQIAVEVAEAL 146
           SEL  A+ E ++AE QI +E  EAL
Sbjct: 108 SELLGAADEASRAEIQIRIEANEAL 132



 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/71 (57%), Positives = 51/71 (71%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG++TVN DSSVQ++AEEA  +D LD   A+  L KAQSEL  A+ E ++AE QI
Sbjct: 65  KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDPGVAKANLEKAQSELLGAADEASRAEIQI 124

Query: 207 AVEVAEALVAA 217
            +E  EALV A
Sbjct: 125 RIEANEALVKA 135


>gi|320582824|gb|EFW97041.1| Delta subunit of the central stalk of mitochondrial F1F0 ATP
           synthase [Ogataea parapolymorpha DL-1]
          Length = 151

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 49/108 (45%), Positives = 68/108 (62%), Gaps = 1/108 (0%)

Query: 40  QVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIA 99
           QV++P+ SG  G+L NHVPT+  L PGV+ V E+ G S K FVS G  ++   S + I  
Sbjct: 41  QVNLPASSGEMGVLANHVPTVEELAPGVVEVIESSGTSSKYFVSGGFASIVPGSKLSIST 100

Query: 100 EEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
            EAHP+D+  +   + +L++AQ   SSA  ET  AEA I +EV EAL+
Sbjct: 101 VEAHPLDAFSSENIKSLLAEAQKNASSA-DETVAAEAAIEIEVLEALQ 147



 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 1/71 (1%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVS G  ++   S + I   EAHP+D+  +   + +L++AQ   SSA  ET  AEA I
Sbjct: 80  KYFVSGGFASIVPGSKLSISTVEAHPLDAFSSENIKSLLAEAQKNASSA-DETVAAEAAI 138

Query: 207 AVEVAEALVAA 217
            +EV EAL AA
Sbjct: 139 EIEVLEALQAA 149


>gi|242129044|gb|ACS83601.1| ATP synthase delta subunit 1 [Gossypium hirsutum]
          Length = 200

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 81/126 (64%), Gaps = 3/126 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           ++F L   +++  + + V  V VP+ +G  G+LP HV T+A LKPGV++V+E    + K 
Sbjct: 72  VNFVLPYASEL--STKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVHEGSETT-KY 128

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           FVSSG + ++ +S   IIA EA P+D +DA+  +  L+    +LSSA++E  KAEAQI +
Sbjct: 129 FVSSGFVFIHANSFADIIAVEAVPLDQIDANLVQKGLADFTQKLSSATTELEKAEAQIGI 188

Query: 141 EVAEAL 146
           +V  AL
Sbjct: 189 DVHSAL 194



 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/77 (44%), Positives = 50/77 (64%)

Query: 141 EVAEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETA 200
           E +E  K FVSSG + ++ +S   IIA EA P+D +DA+  +  L+    +LSSA++E  
Sbjct: 121 EGSETTKYFVSSGFVFIHANSFADIIAVEAVPLDQIDANLVQKGLADFTQKLSSATTELE 180

Query: 201 KAEAQIAVEVAEALVAA 217
           KAEAQI ++V  AL +A
Sbjct: 181 KAEAQIGIDVHSALNSA 197


>gi|440796998|gb|ELR18093.1| ATP synthase, Delta/Epsilon chain, betasandwich domain containing
           protein [Acanthamoeba castellanii str. Neff]
          Length = 191

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 82/165 (49%), Gaps = 19/165 (11%)

Query: 1   MAARLVTSATRLARRGYA---------------DQMDFTLASGNKVFYTNQNVKQVDVPS 45
            A R  +  T   RR YA                ++ FTLA  ++     + V+   VPS
Sbjct: 21  FAPRTASVLTTTTRRSYATDDAQREAHEKAVKEGKLIFTLACPHETLINAEPVRIATVPS 80

Query: 46  FSGAFGILPNHVPTLAILKPGVITV--YETEGVSQK--IFVSSGTITVNDDSSVQIIAEE 101
            +G  GIL +HVPT+A LKPGV+ V  ++  G ++    F+S G +TV  DS   +   E
Sbjct: 81  ATGDMGILAHHVPTIAQLKPGVVKVTKFDESGATRDADYFISGGFVTVYPDSHCNVNVVE 140

Query: 102 AHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           A P+D LD   A+  L     EL+SAS   AK  A I VEV +A+
Sbjct: 141 AFPLDQLDPEKAKKGLEDFTKELASASDAEAKTVATIGVEVYKAM 185



 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 38/69 (55%)

Query: 149 FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 208
           F+S G +TV  DS   +   EA P+D LD   A+  L     EL+SAS   AK  A I V
Sbjct: 120 FISGGFVTVYPDSHCNVNVVEAFPLDQLDPEKAKKGLEDFTKELASASDAEAKTVATIGV 179

Query: 209 EVAEALVAA 217
           EV +A+ +A
Sbjct: 180 EVYKAMCSA 188


>gi|365982767|ref|XP_003668217.1| hypothetical protein NDAI_0A08200 [Naumovozyma dairenensis CBS 421]
 gi|343766983|emb|CCD22974.1| hypothetical protein NDAI_0A08200 [Naumovozyma dairenensis CBS 421]
          Length = 170

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 86/149 (57%), Gaps = 9/149 (6%)

Query: 6   VTSATRLARRGYADQMDFT-------LASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVP 58
           +T  + LA+R YA+ ++ T        A  ++  Y+N  VKQV++P+ SG  GIL NH+P
Sbjct: 15  ITRTSLLAKRFYAETVNSTSNVLKLQFALPHETLYSNTEVKQVNLPAKSGQIGILANHIP 74

Query: 59  TLAILKPGVITVYE-TEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVL 117
           T+  L  GV+ ++E T   ++K F+  G  T+  +S++ I A EA P+DS   +  + +L
Sbjct: 75  TVEQLNSGVVEIFESTNNSTKKYFIPGGFATMQPNSTLCITAVEAFPLDSFSEANVKSLL 134

Query: 118 SKAQSELSSASSETAKAEAQIAVEVAEAL 146
            +A+  ++S   + A +E  I VE+ E L
Sbjct: 135 QEAKKNINSNDPKLA-SENTIKVELLENL 162


>gi|50285881|ref|XP_445369.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524673|emb|CAG58275.1| unnamed protein product [Candida glabrata]
          Length = 154

 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 84/151 (55%), Gaps = 10/151 (6%)

Query: 4   RLVTSATRLARRGYAD-------QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNH 56
           RLVT +  +ARR YAD        +    A  ++  +  + V QV++P+ SG+ GIL NH
Sbjct: 3   RLVTRSV-IARRCYADAAKSAASGLKLRFALPHETLFNGEEVVQVNLPAKSGSIGILANH 61

Query: 57  VPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDV 116
           VPT+  L PGV+ V +    ++K FVS G   V  DS++ + A EA P+DS    + R +
Sbjct: 62  VPTVEQLTPGVVEVVKANE-TKKYFVSGGFAAVQPDSTLCVTAVEAFPLDSFSQDSVRSL 120

Query: 117 LSKAQSELSSASSETAKAEAQIAVEVAEALK 147
           L++A+    S   +TA   A I +EV E L+
Sbjct: 121 LAEAEKNSKSQDEKTAGV-ASIQLEVLEKLQ 150



 Score = 42.7 bits (99), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 1/78 (1%)

Query: 140 VEVAEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSET 199
           V+  E  K FVS G   V  DS++ + A EA P+DS    + R +L++A+    S   +T
Sbjct: 76  VKANETKKYFVSGGFAAVQPDSTLCVTAVEAFPLDSFSQDSVRSLLAEAEKNSKSQDEKT 135

Query: 200 AKAEAQIAVEVAEALVAA 217
           A   A I +EV E L AA
Sbjct: 136 AGV-ASIQLEVLEKLQAA 152


>gi|225453289|ref|XP_002267995.1| PREDICTED: ATP synthase subunit delta', mitochondrial [Vitis
           vinifera]
 gi|297734660|emb|CBI16711.3| unnamed protein product [Vitis vinifera]
          Length = 206

 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 50/111 (45%), Positives = 72/111 (64%), Gaps = 1/111 (0%)

Query: 36  QNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSV 95
           + V  V +P+ +G  G+LP HV T+A LKPGV++V+E   V+ K F+SSG   ++ +S  
Sbjct: 91  KEVDMVIIPATTGQMGVLPGHVATIAELKPGVMSVHEGNDVT-KYFISSGFAVIHANSFA 149

Query: 96  QIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
            IIA EA P+D +D S  +  L+    +LSSAS++  KAEAQI V+V  AL
Sbjct: 150 DIIAIEAVPIDQIDPSLVQKGLADFTQKLSSASTDLEKAEAQIGVDVHSAL 200



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/71 (45%), Positives = 45/71 (63%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K F+SSG   ++ +S   IIA EA P+D +D S  +  L+    +LSSAS++  KAEAQI
Sbjct: 133 KYFISSGFAVIHANSFADIIAIEAVPIDQIDPSLVQKGLADFTQKLSSASTDLEKAEAQI 192

Query: 207 AVEVAEALVAA 217
            V+V  AL +A
Sbjct: 193 GVDVHSALNSA 203


>gi|147863390|emb|CAN84027.1| hypothetical protein VITISV_044183 [Vitis vinifera]
          Length = 206

 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 50/112 (44%), Positives = 72/112 (64%), Gaps = 1/112 (0%)

Query: 36  QNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSV 95
           + V  V +P+ +G  G+LP HV T+A LKPGV++V+E   V+ K F+SSG   ++ +S  
Sbjct: 91  KEVDMVIIPATTGQMGVLPGHVATIAELKPGVMSVHEGNDVT-KYFISSGFAVIHANSFA 149

Query: 96  QIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
            IIA EA P+D +D S  +  L+    +LSSAS++  KAEAQI V+V  AL 
Sbjct: 150 DIIAIEAVPIDQIDPSLVQKGLADFTQKLSSASTDLEKAEAQIGVDVHSALN 201



 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/71 (45%), Positives = 45/71 (63%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K F+SSG   ++ +S   IIA EA P+D +D S  +  L+    +LSSAS++  KAEAQI
Sbjct: 133 KYFISSGFAVIHANSFADIIAIEAVPIDQIDPSLVQKGLADFTQKLSSASTDLEKAEAQI 192

Query: 207 AVEVAEALVAA 217
            V+V  AL +A
Sbjct: 193 GVDVHSALNSA 203


>gi|358366829|dbj|GAA83449.1| ATP synthase delta chain, mitochondrial precursor [Aspergillus
           kawachii IFO 4308]
          Length = 176

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 86/163 (52%), Gaps = 17/163 (10%)

Query: 2   AARLVTSATR--LARRGYA----DQMDFTLASGNKVFYTNQNVK-----------QVDVP 44
           A R   SA R  L RRGYA    D++  +L   ++  + +  V            QV++P
Sbjct: 10  AFRARPSAFRVPLQRRGYAEAVSDKIKLSLTLPHQSIFKSTGVPPHTYEPFPYSVQVNIP 69

Query: 45  SFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHP 104
           + SG  G+L NHVP++  LKPG++ + E  G S+K F+S G   V  DS + I A E  P
Sbjct: 70  AESGEMGVLANHVPSIEQLKPGLVEIVEEGGASKKFFLSGGFAVVQPDSQLSINAVEGFP 129

Query: 105 VDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
           ++       R  +++AQ   + + SE   AEA+I +EV E+L+
Sbjct: 130 LEEFSIDNVRSQIAEAQKIANGSGSEQDIAEAKIELEVLESLQ 172


>gi|328769089|gb|EGF79134.1| hypothetical protein BATDEDRAFT_90133 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 163

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 65/158 (41%), Positives = 85/158 (53%), Gaps = 14/158 (8%)

Query: 1   MAA--RLVTSATR---LARRGYA-------DQMDFTLASGNKVFYTNQNVKQVDVPSFSG 48
           MAA  R +T A R   LARR YA        ++   L + ++   +    +QV++ S  G
Sbjct: 1   MAAFTRALTGARRSLALARRTYATEAVSSSGKLMVNLTAPHQAILSKFEARQVNLSSSDG 60

Query: 49  AFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSL 108
             GIL NHVPT+A LKPG+I V   E  S K FVS G   +N DSS+ I A EA  V  L
Sbjct: 61  DMGILANHVPTIAQLKPGIIEVIGAEK-SSKFFVSGGFAVINPDSSLNINAVEAFSVAEL 119

Query: 109 DASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           D  AA+  +  A   +SS S E  K  A+I +EV EA+
Sbjct: 120 DIDAAKRAVEDATKRMSSGSEED-KVLAKIELEVFEAV 156



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/72 (47%), Positives = 42/72 (58%), Gaps = 1/72 (1%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVS G   +N DSS+ I A EA  V  LD  AA+  +  A   +SS S E  K  A+I
Sbjct: 90  KFFVSGGFAVINPDSSLNINAVEAFSVAELDIDAAKRAVEDATKRMSSGSEED-KVLAKI 148

Query: 207 AVEVAEALVAAA 218
            +EV EA+VAAA
Sbjct: 149 ELEVFEAVVAAA 160


>gi|302762286|ref|XP_002964565.1| hypothetical protein SELMODRAFT_166842 [Selaginella moellendorffii]
 gi|302814296|ref|XP_002988832.1| hypothetical protein SELMODRAFT_184168 [Selaginella moellendorffii]
 gi|300143403|gb|EFJ10094.1| hypothetical protein SELMODRAFT_184168 [Selaginella moellendorffii]
 gi|300168294|gb|EFJ34898.1| hypothetical protein SELMODRAFT_166842 [Selaginella moellendorffii]
          Length = 215

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 50/126 (39%), Positives = 76/126 (60%), Gaps = 2/126 (1%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           ++F L S  +V    + V  V +P+ SG  G+LP HVPT+A LKPGV++V++   V  + 
Sbjct: 84  VNFVLPS--EVAMNAEKVDMVILPATSGLMGVLPGHVPTIAELKPGVLSVHDGGQVKTQY 141

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           F+SSG   V+ +S   I+  EA P+D  D    R  L+    +LSSA+++  KA+AQI V
Sbjct: 142 FLSSGFAFVHANSVTDIVVVEAAPLDRFDPDEVRKNLADYNQKLSSATTDLDKAQAQIGV 201

Query: 141 EVAEAL 146
           +V  +L
Sbjct: 202 DVFGSL 207



 Score = 45.8 bits (107), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 41/71 (57%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           + F+SSG   V+ +S   I+  EA P+D  D    R  L+    +LSSA+++  KA+AQI
Sbjct: 140 QYFLSSGFAFVHANSVTDIVVVEAAPLDRFDPDEVRKNLADYNQKLSSATTDLDKAQAQI 199

Query: 207 AVEVAEALVAA 217
            V+V  +L  A
Sbjct: 200 GVDVFGSLAFA 210


>gi|414590342|tpg|DAA40913.1| TPA: hypothetical protein ZEAMMB73_724426 [Zea mays]
          Length = 112

 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 51/108 (47%), Positives = 71/108 (65%), Gaps = 1/108 (0%)

Query: 40  QVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIA 99
            V VP+ +G  G+LP HV T+A LKPGV++V+E   VS K FVSSG   V+ +S   I+A
Sbjct: 1   MVIVPATTGQMGVLPGHVATIAELKPGVLSVHEGNDVS-KYFVSSGFAFVHANSIADIVA 59

Query: 100 EEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
            EA PVD +D +  +  L++  ++L SAS++  KAEAQI V+V  AL 
Sbjct: 60  VEAIPVDQIDPALVQKGLAEFTAKLGSASTDLEKAEAQIGVDVHSALN 107



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/71 (46%), Positives = 46/71 (64%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG   V+ +S   I+A EA PVD +D +  +  L++  ++L SAS++  KAEAQI
Sbjct: 39  KYFVSSGFAFVHANSIADIVAVEAIPVDQIDPALVQKGLAEFTAKLGSASTDLEKAEAQI 98

Query: 207 AVEVAEALVAA 217
            V+V  AL AA
Sbjct: 99  GVDVHSALNAA 109


>gi|330819010|ref|XP_003291559.1| hypothetical protein DICPUDRAFT_92704 [Dictyostelium purpureum]
 gi|325078261|gb|EGC31922.1| hypothetical protein DICPUDRAFT_92704 [Dictyostelium purpureum]
          Length = 167

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 70/128 (54%)

Query: 19  DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQ 78
           D + F+L S ++  Y ++  + V +P   G FGI  NHVP ++ LKPG++ +    G  +
Sbjct: 32  DLLTFSLLSPHQTIYKDKKAQLVTLPGAKGVFGIAKNHVPKISELKPGIVQINHENGDLE 91

Query: 79  KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 138
           K FVS G   VN D+S  I   EA PVD LD +  ++ L++     + A  E AKA A +
Sbjct: 92  KFFVSGGFAFVNPDASCYINVIEAVPVDQLDPNEVKNGLARYTQLFNEAQDENAKAVALV 151

Query: 139 AVEVAEAL 146
            +E  + +
Sbjct: 152 GLEAHQQM 159



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 1/108 (0%)

Query: 112 AARDVLSKAQSELSSASSETAKAEAQIAVEVAEALKIFVSSGTITVNDDSSVQIIAEEAH 171
            A+ V   A++ +   S E      QI  E  +  K FVS G   VN D+S  I   EA 
Sbjct: 58  GAKGVFGIAKNHVPKIS-ELKPGIVQINHENGDLEKFFVSGGFAFVNPDASCYINVIEAV 116

Query: 172 PVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEALVAAAS 219
           PVD LD +  ++ L++     + A  E AKA A + +E  + +  A  
Sbjct: 117 PVDQLDPNEVKNGLARYTQLFNEAQDENAKAVALVGLEAHQQMAYACG 164


>gi|327296932|ref|XP_003233160.1| ATP synthase F1 epsilon subunit [Trichophyton rubrum CBS 118892]
 gi|326464466|gb|EGD89919.1| ATP synthase F1 epsilon subunit [Trichophyton rubrum CBS 118892]
          Length = 165

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 82/140 (58%), Gaps = 4/140 (2%)

Query: 12  LARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGV 67
           L++R YA    D++  +L    +  + + +V QV++ + SG  GIL +HVP++  L+PG+
Sbjct: 22  LSQRTYATAVADKLKLSLVLPKETIFKSADVVQVNIAAESGDMGILSSHVPSIEQLRPGL 81

Query: 68  ITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSA 127
           I + E  G ++K F++ G   +  DS++ I A E  P+D+  A   +  L++AQ   S  
Sbjct: 82  IEIIEEGGQTKKFFLAGGFAVMQPDSNLNINAVEGFPLDAFSADNVKSQLAEAQRLASGT 141

Query: 128 SSETAKAEAQIAVEVAEALK 147
            SE   AEA+I VEV E+L+
Sbjct: 142 GSEKEIAEAKIQVEVLESLQ 161



 Score = 45.4 bits (106), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 44/81 (54%)

Query: 137 QIAVEVAEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS 196
           +I  E  +  K F++ G   +  DS++ I A E  P+D+  A   +  L++AQ   S   
Sbjct: 83  EIIEEGGQTKKFFLAGGFAVMQPDSNLNINAVEGFPLDAFSADNVKSQLAEAQRLASGTG 142

Query: 197 SETAKAEAQIAVEVAEALVAA 217
           SE   AEA+I VEV E+L A+
Sbjct: 143 SEKEIAEAKIQVEVLESLQAS 163


>gi|356504527|ref|XP_003521047.1| PREDICTED: ATP synthase subunit delta', mitochondrial-like [Glycine
           max]
          Length = 197

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/111 (45%), Positives = 72/111 (64%), Gaps = 1/111 (0%)

Query: 36  QNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSV 95
           + V  V VP+ +G  G+LP HV T+A LKPGV++V+E   V+ K FVSSG   ++ +S  
Sbjct: 82  KEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVHEGNDVT-KYFVSSGFAFIHANSVA 140

Query: 96  QIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
            IIA EA PVD +DA+  +  L     +L+SA+++  KAEAQI V+V  AL
Sbjct: 141 DIIAVEAVPVDRIDANLVQKGLQDFTQKLNSATTDLEKAEAQIGVDVHSAL 191



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/71 (45%), Positives = 45/71 (63%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG   ++ +S   IIA EA PVD +DA+  +  L     +L+SA+++  KAEAQI
Sbjct: 124 KYFVSSGFAFIHANSVADIIAVEAVPVDRIDANLVQKGLQDFTQKLNSATTDLEKAEAQI 183

Query: 207 AVEVAEALVAA 217
            V+V  AL +A
Sbjct: 184 GVDVHSALNSA 194


>gi|315044183|ref|XP_003171467.1| ATP synthase F1 [Arthroderma gypseum CBS 118893]
 gi|311343810|gb|EFR03013.1| ATP synthase F1 [Arthroderma gypseum CBS 118893]
          Length = 165

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 82/140 (58%), Gaps = 4/140 (2%)

Query: 12  LARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGV 67
           L++R YA    D++  +L    +  Y + +V QV++ + SG  GIL +HVP++  L+PG+
Sbjct: 22  LSQRTYATAVADKLKLSLVLPKETIYKSADVVQVNIAAESGDMGILSSHVPSIEQLRPGL 81

Query: 68  ITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSA 127
           I + E  G ++K F++ G   +  DS++ I A E  P++   A A +  L++AQ   +  
Sbjct: 82  IEIIEEGGQTKKFFLAGGFAVMQPDSNLNINAVEGFPLEDFSADAVKSQLAEAQRLATGT 141

Query: 128 SSETAKAEAQIAVEVAEALK 147
            SE   AEA++ VEV E+L+
Sbjct: 142 GSEKEIAEAKVQVEVLESLQ 161



 Score = 43.1 bits (100), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 44/81 (54%)

Query: 137 QIAVEVAEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS 196
           +I  E  +  K F++ G   +  DS++ I A E  P++   A A +  L++AQ   +   
Sbjct: 83  EIIEEGGQTKKFFLAGGFAVMQPDSNLNINAVEGFPLEDFSADAVKSQLAEAQRLATGTG 142

Query: 197 SETAKAEAQIAVEVAEALVAA 217
           SE   AEA++ VEV E+L A+
Sbjct: 143 SEKEIAEAKVQVEVLESLQAS 163


>gi|224136358|ref|XP_002326840.1| predicted protein [Populus trichocarpa]
 gi|222835155|gb|EEE73590.1| predicted protein [Populus trichocarpa]
          Length = 198

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/126 (40%), Positives = 81/126 (64%), Gaps = 3/126 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           ++F L   +++  + + V  V +P+ +G  G+LP HV T+  LKPGV++V+E   V +K 
Sbjct: 70  VNFVLPYASEI--SGKEVDMVIIPASTGQMGVLPGHVSTITELKPGVLSVHEGNEV-KKY 126

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           FVSSG   ++ +S   I+A EA P+D +D+S  +  L++   +LSSAS++  KAEAQI V
Sbjct: 127 FVSSGFAFIHANSIADIVAVEAAPLDQIDSSLVQKGLAEFTQKLSSASTDLEKAEAQIGV 186

Query: 141 EVAEAL 146
           +V  AL
Sbjct: 187 DVHSAL 192



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 48/74 (64%)

Query: 144 EALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAE 203
           E  K FVSSG   ++ +S   I+A EA P+D +D+S  +  L++   +LSSAS++  KAE
Sbjct: 122 EVKKYFVSSGFAFIHANSIADIVAVEAAPLDQIDSSLVQKGLAEFTQKLSSASTDLEKAE 181

Query: 204 AQIAVEVAEALVAA 217
           AQI V+V  AL AA
Sbjct: 182 AQIGVDVHSALNAA 195


>gi|2493046|sp|Q40089.1|ATP4_IPOBA RecName: Full=ATP synthase subunit delta', mitochondrial; AltName:
           Full=F-ATPase delta' subunit; Flags: Precursor
 gi|217938|dbj|BAA01511.1| mitochondrial F1-ATPase delta subunit [Ipomoea batatas]
          Length = 200

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/112 (43%), Positives = 73/112 (65%), Gaps = 1/112 (0%)

Query: 35  NQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSS 94
            + V  V +P+ +G  G+LP HV T+A LKPGV++V+E   VS K FVS G   ++ +S 
Sbjct: 84  GKEVDMVIIPATTGQMGVLPGHVATIAELKPGVMSVHEGNDVS-KYFVSGGFAFIHANSF 142

Query: 95  VQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
             IIA EA P+D +DA+  +  L++   +L++AS++  KAEAQI V+V  AL
Sbjct: 143 ADIIAVEAVPLDRIDANLVQKGLAEFTQKLNTASTDVEKAEAQIGVDVHSAL 194



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 46/71 (64%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVS G   ++ +S   IIA EA P+D +DA+  +  L++   +L++AS++  KAEAQI
Sbjct: 127 KYFVSGGFAFIHANSFADIIAVEAVPLDRIDANLVQKGLAEFTQKLNTASTDVEKAEAQI 186

Query: 207 AVEVAEALVAA 217
            V+V  AL AA
Sbjct: 187 GVDVHSALNAA 197


>gi|343426978|emb|CBQ70506.1| probable ATP synthase delta chain precursor, mitochondrial
           [Sporisorium reilianum SRZ2]
          Length = 168

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/139 (42%), Positives = 87/139 (62%), Gaps = 5/139 (3%)

Query: 13  ARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVI 68
           ARRGYA    D++  +    ++  Y +  V QV++ S SG  GIL +HVP +  L+PGV+
Sbjct: 25  ARRGYAEAVSDKLKLSFILPHQAIYDSTEVTQVNIASASGDMGILASHVPAVEELRPGVL 84

Query: 69  TVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS 128
            V E+ G ++K FVS G  TV+ ++ + + A EA+P+++  A A R  LS+AQ   SS S
Sbjct: 85  EVVESSG-TKKWFVSGGFATVHPNNKLVVNAIEAYPLENFSAEAVRSALSEAQRVASSGS 143

Query: 129 SETAKAEAQIAVEVAEALK 147
           S  AKAEA+I +EV  AL+
Sbjct: 144 SAEAKAEAEIEIEVYTALQ 162



 Score = 41.2 bits (95), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 36/78 (46%), Positives = 49/78 (62%)

Query: 140 VEVAEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSET 199
           VE +   K FVS G  TV+ ++ + + A EA+P+++  A A R  LS+AQ   SS SS  
Sbjct: 87  VESSGTKKWFVSGGFATVHPNNKLVVNAIEAYPLENFSAEAVRSALSEAQRVASSGSSAE 146

Query: 200 AKAEAQIAVEVAEALVAA 217
           AKAEA+I +EV  AL AA
Sbjct: 147 AKAEAEIEIEVYTALQAA 164


>gi|393245019|gb|EJD52530.1| ATP-synthase delta-subunit [Auricularia delicata TFB-10046 SS5]
          Length = 164

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 88/150 (58%), Gaps = 5/150 (3%)

Query: 2   AARL-VTSATRLARRGYA---DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHV 57
           A RL V++  ++ RRGYA   D++  +L   ++  +++ +  QV++ + +G  GIL NHV
Sbjct: 10  ARRLAVSAGAQIQRRGYAEVSDKIKLSLVLPHQTIFSSADAVQVNIAAATGDMGILANHV 69

Query: 58  PTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVL 117
           P++  L+PGVI V E  G ++K F S G   V+ ++ + I A EA P++     A R  L
Sbjct: 70  PSVEALRPGVIEVVEASG-TKKWFASGGFAIVHPNNKLTINAVEAAPLEDFSIEAVRANL 128

Query: 118 SKAQSELSSASSETAKAEAQIAVEVAEALK 147
           ++AQ   +   +E  K EA I V+V EA++
Sbjct: 129 AEAQKVANGNGAEEDKLEASIEVDVYEAIQ 158


>gi|357512961|ref|XP_003626769.1| ATP synthase delta subunit [Medicago truncatula]
 gi|355520791|gb|AET01245.1| ATP synthase delta subunit [Medicago truncatula]
          Length = 197

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/118 (47%), Positives = 75/118 (63%), Gaps = 5/118 (4%)

Query: 33  YTNQ-NVKQVD---VPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTIT 88
           Y +Q + K+VD   +P+ +G  GILP HV T+A LKPGV+ V E    S K FVSSG   
Sbjct: 75  YASQLSAKEVDLVIIPATTGQMGILPGHVSTIAELKPGVMIVQEGND-STKYFVSSGFAF 133

Query: 89  VNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           V+ +S   IIA EA P+D +DAS  +  L +   +LSSA+++  KAEAQI V+V  AL
Sbjct: 134 VHANSVADIIAVEAVPLDQIDASLVQKGLQEFTQKLSSATTDLEKAEAQIGVDVHSAL 191



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 51/85 (60%)

Query: 133 KAEAQIAVEVAEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSEL 192
           K    I  E  ++ K FVSSG   V+ +S   IIA EA P+D +DAS  +  L +   +L
Sbjct: 110 KPGVMIVQEGNDSTKYFVSSGFAFVHANSVADIIAVEAVPLDQIDASLVQKGLQEFTQKL 169

Query: 193 SSASSETAKAEAQIAVEVAEALVAA 217
           SSA+++  KAEAQI V+V  AL +A
Sbjct: 170 SSATTDLEKAEAQIGVDVHSALNSA 194


>gi|50311439|ref|XP_455744.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|52788272|sp|P78700.2|ATPD_KLULA RecName: Full=ATP synthase subunit delta, mitochondrial; AltName:
           Full=F-ATPase delta subunit; Flags: Precursor
 gi|49644880|emb|CAG98452.1| KLLA0F14773p [Kluyveromyces lactis]
          Length = 159

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/142 (40%), Positives = 81/142 (57%), Gaps = 6/142 (4%)

Query: 10  TRLARRGYADQMD----FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKP 65
           T +A+R YA+  D       A  ++  ++   V QV++P+ SG  GIL NHVPT+  L P
Sbjct: 16  TVVAKRTYAEAADGALKLQFALPHQTLFSGTPVTQVNLPAKSGQIGILANHVPTVEQLVP 75

Query: 66  GVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELS 125
           GV+ V E    S+K FVS G  TV  DS++ I + EA P++S      R +L++AQ  +S
Sbjct: 76  GVVEVLEGSS-SKKFFVSGGFATVQPDSTLAITSVEAFPLESFSPENVRSLLAEAQKNVS 134

Query: 126 SASSETAKAEAQIAVEVAEALK 147
           SA    A   A I +EV EAL+
Sbjct: 135 SADEVAAAEAA-IQLEVLEALQ 155



 Score = 43.9 bits (102), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 1/71 (1%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVS G  TV  DS++ I + EA P++S      R +L++AQ  +SSA    A   A I
Sbjct: 88  KFFVSGGFATVQPDSTLAITSVEAFPLESFSPENVRSLLAEAQKNVSSADEVAAAEAA-I 146

Query: 207 AVEVAEALVAA 217
            +EV EAL AA
Sbjct: 147 QLEVLEALQAA 157


>gi|356520754|ref|XP_003529025.1| PREDICTED: ATP synthase subunit delta', mitochondrial-like [Glycine
           max]
          Length = 197

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/111 (45%), Positives = 72/111 (64%), Gaps = 1/111 (0%)

Query: 36  QNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSV 95
           + V  V VP+ +G  G+LP HV T+A LKPGV++V+E   V+ K FVSSG   ++ +S  
Sbjct: 82  KEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVHEGNDVT-KYFVSSGFAFIHANSVA 140

Query: 96  QIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
            IIA EA PVD +D +  +  L +   +L+SA+++  KAEAQI V+V  AL
Sbjct: 141 DIIAVEAVPVDRIDVNLVQKGLQEFTQKLNSATTDLEKAEAQIGVDVHSAL 191



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/73 (43%), Positives = 46/73 (63%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG   ++ +S   IIA EA PVD +D +  +  L +   +L+SA+++  KAEAQI
Sbjct: 124 KYFVSSGFAFIHANSVADIIAVEAVPVDRIDVNLVQKGLQEFTQKLNSATTDLEKAEAQI 183

Query: 207 AVEVAEALVAAAS 219
            V+V  AL +A S
Sbjct: 184 GVDVHSALNSALS 196


>gi|296811488|ref|XP_002846082.1| ATP synthase delta chain [Arthroderma otae CBS 113480]
 gi|238843470|gb|EEQ33132.1| ATP synthase delta chain [Arthroderma otae CBS 113480]
          Length = 165

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 82/142 (57%), Gaps = 4/142 (2%)

Query: 10  TRLARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKP 65
           T L++R YA    D++  +L    +  Y + +V QV++ + SG  GIL +HVP++  L+P
Sbjct: 20  TPLSQRTYATAVADKLKLSLVLPKETIYKSADVVQVNIAAESGDMGILSSHVPSIEQLRP 79

Query: 66  GVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELS 125
           G+I + E  G ++K F++ G   +  DS++ I A E   ++   A A +  L++AQ   S
Sbjct: 80  GLIEIIEEGGQTKKFFLAGGFAVMQPDSNLNINAVEGFALEDFSADAVKSQLAEAQRLAS 139

Query: 126 SASSETAKAEAQIAVEVAEALK 147
              SE   AEA+I VEV E+L+
Sbjct: 140 GTGSEKEVAEAKIQVEVLESLQ 161



 Score = 40.8 bits (94), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 43/81 (53%)

Query: 137 QIAVEVAEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS 196
           +I  E  +  K F++ G   +  DS++ I A E   ++   A A +  L++AQ   S   
Sbjct: 83  EIIEEGGQTKKFFLAGGFAVMQPDSNLNINAVEGFALEDFSADAVKSQLAEAQRLASGTG 142

Query: 197 SETAKAEAQIAVEVAEALVAA 217
           SE   AEA+I VEV E+L A+
Sbjct: 143 SEKEVAEAKIQVEVLESLQAS 163


>gi|401840867|gb|EJT43511.1| ATP16-like protein [Saccharomyces kudriavzevii IFO 1802]
          Length = 162

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/127 (39%), Positives = 73/127 (57%), Gaps = 2/127 (1%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           +    A  ++  Y+   V QV++P+ SG  G+L NHVPT+  L PGVI V E    ++K 
Sbjct: 34  LKLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVIEVMEGSN-TKKF 92

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           F+S G  TV  DS + + A EA P+DS      + +L++A+   SS+ +  A AEA I V
Sbjct: 93  FISGGFATVQPDSQLCVTAIEAFPLDSFSQENIKSLLAEAKKNASSSDAREA-AEAAIQV 151

Query: 141 EVAEALK 147
           EV E L+
Sbjct: 152 EVLEGLQ 158



 Score = 45.1 bits (105), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 1/70 (1%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K F+S G  TV  DS + + A EA P+DS      + +L++A+   SS+ +  A AEA I
Sbjct: 91  KFFISGGFATVQPDSQLCVTAIEAFPLDSFSQENIKSLLAEAKKNASSSDAREA-AEAAI 149

Query: 207 AVEVAEALVA 216
            VEV E L A
Sbjct: 150 QVEVLEGLQA 159


>gi|365761593|gb|EHN03237.1| Atp16p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 161

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/127 (39%), Positives = 73/127 (57%), Gaps = 2/127 (1%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           +    A  ++  Y+   V QV++P+ SG  G+L NHVPT+  L PGVI V E    ++K 
Sbjct: 33  LKLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVIEVMEGSN-TKKF 91

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           F+S G  TV  DS + + A EA P+DS      + +L++A+   SS+ +  A AEA I V
Sbjct: 92  FISGGFATVQPDSQLCVTAIEAFPLDSFSQENIKSLLAEAKKNASSSDAREA-AEAAIQV 150

Query: 141 EVAEALK 147
           EV E L+
Sbjct: 151 EVLEGLQ 157



 Score = 45.1 bits (105), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 1/70 (1%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K F+S G  TV  DS + + A EA P+DS      + +L++A+   SS+ +  A AEA I
Sbjct: 90  KFFISGGFATVQPDSQLCVTAIEAFPLDSFSQENIKSLLAEAKKNASSSDAREA-AEAAI 148

Query: 207 AVEVAEALVA 216
            VEV E L A
Sbjct: 149 QVEVLEGLQA 158


>gi|323305750|gb|EGA59490.1| Atp16p [Saccharomyces cerevisiae FostersB]
          Length = 160

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 49/127 (38%), Positives = 75/127 (59%), Gaps = 2/127 (1%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           +    A  ++  Y+   V QV++P+ SG  G+L NHVPT+  L PGV+ V E    S+K 
Sbjct: 32  LKLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGXN-SKKF 90

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           F+S G  TV  DS + + A EA P++S      +++L++A+  +SS+ +  A AEA I V
Sbjct: 91  FISGGFATVQPDSQLCVTAIEAFPLESFSQENIKNLLAEAKKNVSSSDAREA-AEAAIQV 149

Query: 141 EVAEALK 147
           EV E L+
Sbjct: 150 EVLENLQ 156


>gi|6320200|ref|NP_010280.1| F1F0 ATP synthase subunit delta [Saccharomyces cerevisiae S288c]
 gi|2493051|sp|Q12165.1|ATPD_YEAST RecName: Full=ATP synthase subunit delta, mitochondrial; AltName:
           Full=F-ATPase delta subunit; Flags: Precursor
 gi|307568105|pdb|2XOK|H Chain H, Refined Structure Of Yeast F1c10 Atpase Complex To 3 A
           Resolution
 gi|433620|emb|CAA79912.1| ATP synthase delta subunit [Saccharomyces cerevisiae]
 gi|642802|emb|CAA88057.1| ATP synthase delta subunit [Saccharomyces cerevisiae]
 gi|683693|emb|CAA88355.1| ATP synthase delta subunit (Z21857) [Saccharomyces cerevisiae]
 gi|1430961|emb|CAA98560.1| ATP16 [Saccharomyces cerevisiae]
 gi|45270200|gb|AAS56481.1| YDL004W [Saccharomyces cerevisiae]
 gi|151941986|gb|EDN60342.1| F1F0 ATP synthase delta subunit [Saccharomyces cerevisiae YJM789]
 gi|190405024|gb|EDV08291.1| ATP synthase delta subunit [Saccharomyces cerevisiae RM11-1a]
 gi|256268990|gb|EEU04333.1| Atp16p [Saccharomyces cerevisiae JAY291]
 gi|259145241|emb|CAY78505.1| Atp16p [Saccharomyces cerevisiae EC1118]
 gi|285811020|tpg|DAA11844.1| TPA: F1F0 ATP synthase subunit delta [Saccharomyces cerevisiae
           S288c]
 gi|365766512|gb|EHN08008.1| Atp16p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
 gi|392300111|gb|EIW11202.1| Atp16p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 160

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 49/127 (38%), Positives = 75/127 (59%), Gaps = 2/127 (1%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           +    A  ++  Y+   V QV++P+ SG  G+L NHVPT+  L PGV+ V E    S+K 
Sbjct: 32  LKLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGSN-SKKF 90

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           F+S G  TV  DS + + A EA P++S      +++L++A+  +SS+ +  A AEA I V
Sbjct: 91  FISGGFATVQPDSQLCVTAIEAFPLESFSQENIKNLLAEAKKNVSSSDAREA-AEAAIQV 149

Query: 141 EVAEALK 147
           EV E L+
Sbjct: 150 EVLENLQ 156


>gi|367013408|ref|XP_003681204.1| hypothetical protein TDEL_0D04090 [Torulaspora delbrueckii]
 gi|359748864|emb|CCE91993.1| hypothetical protein TDEL_0D04090 [Torulaspora delbrueckii]
          Length = 159

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/154 (40%), Positives = 90/154 (58%), Gaps = 12/154 (7%)

Query: 2   AARLVTSATRLA-RRGYAD-------QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGIL 53
           AAR V+ +  LA +R YA+       Q+ F L   ++  +    V QV++P+ SG  GIL
Sbjct: 6   AARTVSRSLNLAGKRFYAEAAPSGFLQLQFALP--HETVFAGSKVTQVNLPAQSGRIGIL 63

Query: 54  PNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAA 113
            NHVPT+  L PGVI V+E    S+K FVS G   +  DS++ I + EA P+DS      
Sbjct: 64  ANHVPTVEQLTPGVIEVFEGTQ-SKKFFVSGGFAAMQPDSTLCITSVEAFPLDSFSQENV 122

Query: 114 RDVLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
           R +LS A+S+ +S+S E   AEA I +EV E+L+
Sbjct: 123 RSLLSDAKSK-ASSSDERVAAEAAIQIEVLESLQ 155



 Score = 38.9 bits (89), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 1/71 (1%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVS G   +  DS++ I + EA P+DS      R +LS A+S+ +S+S E   AEA I
Sbjct: 88  KFFVSGGFAAMQPDSTLCITSVEAFPLDSFSQENVRSLLSDAKSK-ASSSDERVAAEAAI 146

Query: 207 AVEVAEALVAA 217
            +EV E+L +A
Sbjct: 147 QIEVLESLQSA 157


>gi|306991956|pdb|3OE7|H Chain H, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991965|pdb|3OE7|Q Chain Q, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991974|pdb|3OE7|Z Chain Z, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
          Length = 137

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 49/127 (38%), Positives = 75/127 (59%), Gaps = 2/127 (1%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           +    A  ++  Y+   V QV++P+ SG  G+L NHVPT+  L PGV+ V E    S+K 
Sbjct: 9   LKLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGSN-SKKF 67

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           F+S G  TV  DS + + A EA P++S      +++L++A+  +SS+ +  A AEA I V
Sbjct: 68  FISGGFATVQPDSQLCVTAIEAFPLESFSQENIKNLLAEAKKNVSSSDAREA-AEAAIQV 126

Query: 141 EVAEALK 147
           EV E L+
Sbjct: 127 EVLENLQ 133


>gi|119389911|pdb|2HLD|H Chain H, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389920|pdb|2HLD|Q Chain Q, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389929|pdb|2HLD|Z Chain Z, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|224510815|pdb|3FKS|H Chain H, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510824|pdb|3FKS|Q Chain Q, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510833|pdb|3FKS|Z Chain Z, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|300193122|pdb|2WPD|H Chain H, The Mg.Adp Inhibited State Of The Yeast F1c10 Atp Synthase
 gi|306991983|pdb|3OEE|H Chain H, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991992|pdb|3OEE|Q Chain Q, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306992001|pdb|3OEE|Z Chain Z, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306992010|pdb|3OEH|H Chain H, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992019|pdb|3OEH|Q Chain Q, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992028|pdb|3OEH|Z Chain Z, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992037|pdb|3OFN|H Chain H, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992046|pdb|3OFN|Q Chain Q, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|372467212|pdb|3ZRY|H Chain H, Rotor Architecture In The F(1)-C(10)-Ring Complex Of The
           Yeast F-Atp Synthase
 gi|449802277|pdb|3ZIA|H Chain H, The Structure Of F1-atpase From Saccharomyces Cerevisiae
           Inhibited By Its Regulatory Protein If1
 gi|449802287|pdb|3ZIA|R Chain R, The Structure Of F1-atpase From Saccharomyces Cerevisiae
           Inhibited By Its Regulatory Protein If1
          Length = 138

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 49/127 (38%), Positives = 75/127 (59%), Gaps = 2/127 (1%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           +    A  ++  Y+   V QV++P+ SG  G+L NHVPT+  L PGV+ V E    S+K 
Sbjct: 10  LKLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGSN-SKKF 68

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           F+S G  TV  DS + + A EA P++S      +++L++A+  +SS+ +  A AEA I V
Sbjct: 69  FISGGFATVQPDSQLCVTAIEAFPLESFSQENIKNLLAEAKKNVSSSDAREA-AEAAIQV 127

Query: 141 EVAEALK 147
           EV E L+
Sbjct: 128 EVLENLQ 134


>gi|349577067|dbj|GAA22236.1| K7_Atp16p [Saccharomyces cerevisiae Kyokai no. 7]
          Length = 160

 Score = 84.0 bits (206), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 49/127 (38%), Positives = 75/127 (59%), Gaps = 2/127 (1%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           +    A  ++  Y+   V QV++P+ SG  G+L NHVPT+  L PGV+ V E    S+K 
Sbjct: 32  LKLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGTN-SKKF 90

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           F+S G  TV  DS + + A EA P++S      +++L++A+  +SS+ +  A AEA I V
Sbjct: 91  FISGGFATVQPDSQLCVTAIEAFPLESFSQENIKNLLAEAKKNVSSSDAREA-AEAAIQV 149

Query: 141 EVAEALK 147
           EV E L+
Sbjct: 150 EVLENLQ 156


>gi|255722770|ref|XP_002546319.1| ATP synthase delta chain, mitochondrial precursor [Candida
           tropicalis MYA-3404]
 gi|240130836|gb|EER30398.1| ATP synthase delta chain, mitochondrial precursor [Candida
           tropicalis MYA-3404]
          Length = 161

 Score = 84.0 bits (206), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 77/141 (54%), Gaps = 8/141 (5%)

Query: 14  RRGYA-------DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPG 66
           +R YA       D +  +LA   +  Y    V+QV++PS +G  GIL NH+P +  L+PG
Sbjct: 18  KRTYATEAAPSSDALKLSLALPYQTLYNESEVQQVNLPSVNGDLGILANHIPIVEQLRPG 77

Query: 67  VITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSS 126
           ++ +    G S++ FVS G   V   + + I A EA   D +D SA +++++ AQ    S
Sbjct: 78  LLEIISKNGDSEQYFVSGGFAMVQPGNKLTISAIEAFKPDQIDLSAVKNLIADAQKRAES 137

Query: 127 ASSETAKAEAQIAVEVAEALK 147
            S E   AEA I +EV +AL+
Sbjct: 138 -SDEKVAAEATIELEVLDALQ 157


>gi|407768750|ref|ZP_11116128.1| F-type H+-transporting ATPase subunit epsilon [Thalassospira
           xiamenensis M-5 = DSM 17429]
 gi|407288434|gb|EKF13912.1| F-type H+-transporting ATPase subunit epsilon [Thalassospira
           xiamenensis M-5 = DSM 17429]
          Length = 134

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 46/114 (40%), Positives = 69/114 (60%), Gaps = 1/114 (0%)

Query: 32  FYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVND 91
              ++ V+ V VP   G FG+LP H P ++ ++PGVI +Y    VS++IFV+ G   VN 
Sbjct: 15  LLKSEPVEMVVVPGTDGNFGVLPKHSPMISTIRPGVIDIYAGGKVSERIFVAGGVAEVNP 74

Query: 92  DSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEA 145
           +    I+AEEA PV  + A  A+  L  AQ++L +A++   KA A+ A+EVA A
Sbjct: 75  ERCT-ILAEEAVPVSDIKADEAQARLETAQADLKAATTAHDKANAERALEVARA 127



 Score = 46.2 bits (108), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 1/73 (1%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           +IFV+ G   VN +    I+AEEA PV  + A  A+  L  AQ++L +A++   KA A+ 
Sbjct: 62  RIFVAGGVAEVNPERCT-ILAEEAVPVSDIKADEAQARLETAQADLKAATTAHDKANAER 120

Query: 207 AVEVAEALVAAAS 219
           A+EVA A +AA S
Sbjct: 121 ALEVARAQIAALS 133


>gi|388512823|gb|AFK44473.1| unknown [Lotus japonicus]
          Length = 199

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 50/113 (44%), Positives = 73/113 (64%), Gaps = 1/113 (0%)

Query: 34  TNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDS 93
           +++ V  V VP+ +G  G+LP HV T+A LKPG+++V+E   V+ K FVSSG   V+ +S
Sbjct: 82  SSKEVDMVIVPATTGQMGVLPGHVATIAELKPGLLSVHEGNDVT-KYFVSSGFAFVHANS 140

Query: 94  SVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
              IIA EA P+D +D +  +  L     +L+SAS++  KAEAQI V+V  AL
Sbjct: 141 VADIIAVEAVPLDRIDPNLVQKGLQDFTQKLNSASTDLEKAEAQIGVDVHSAL 193



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/71 (45%), Positives = 44/71 (61%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG   V+ +S   IIA EA P+D +D +  +  L     +L+SAS++  KAEAQI
Sbjct: 126 KYFVSSGFAFVHANSVADIIAVEAVPLDRIDPNLVQKGLQDFTQKLNSASTDLEKAEAQI 185

Query: 207 AVEVAEALVAA 217
            V+V  AL +A
Sbjct: 186 GVDVHSALNSA 196


>gi|407773677|ref|ZP_11120977.1| ATP synthase subunit epsilon [Thalassospira profundimaris WP0211]
 gi|407283123|gb|EKF08664.1| ATP synthase subunit epsilon [Thalassospira profundimaris WP0211]
          Length = 134

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 46/114 (40%), Positives = 68/114 (59%), Gaps = 1/114 (0%)

Query: 32  FYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVND 91
              ++ V+ V VP   G FG+LP H P ++ ++PGVI +Y    VS++IFV+ G   VN 
Sbjct: 15  LLKSEPVEMVVVPGTDGNFGVLPKHAPMISTIRPGVIDIYAGGKVSERIFVAGGVAEVNP 74

Query: 92  DSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEA 145
           +    I+AEEA PV  L A  A+  L +AQ+ L SA +   KA A+ A+++A A
Sbjct: 75  ERCT-ILAEEAVPVSDLKADEAQARLEEAQAALKSAETAHDKANAERALDIARA 127



 Score = 43.9 bits (102), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 1/73 (1%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           +IFV+ G   VN +    I+AEEA PV  L A  A+  L +AQ+ L SA +   KA A+ 
Sbjct: 62  RIFVAGGVAEVNPERCT-ILAEEAVPVSDLKADEAQARLEEAQAALKSAETAHDKANAER 120

Query: 207 AVEVAEALVAAAS 219
           A+++A A + A S
Sbjct: 121 ALDIARAQIQALS 133


>gi|402550248|pdb|4B2Q|H Chain H, Model Of The Yeast F1fo-Atp Synthase Dimer Based On
           Subtomogram Average
 gi|402550271|pdb|4B2Q|HH Chain h, Model Of The Yeast F1fo-Atp Synthase Dimer Based On
           Subtomogram Average
          Length = 132

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 49/127 (38%), Positives = 75/127 (59%), Gaps = 2/127 (1%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           +    A  ++  Y+   V QV++P+ SG  G+L NHVPT+  L PGV+ V E    S+K 
Sbjct: 4   LKLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGSN-SKKF 62

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           F+S G  TV  DS + + A EA P++S      +++L++A+  +SS+ +  A AEA I V
Sbjct: 63  FISGGFATVQPDSQLCVTAIEAFPLESFSQENIKNLLAEAKKNVSSSDAREA-AEAAIQV 121

Query: 141 EVAEALK 147
           EV E L+
Sbjct: 122 EVLENLQ 128


>gi|116781283|gb|ABK22036.1| unknown [Picea sitchensis]
 gi|224285502|gb|ACN40471.1| unknown [Picea sitchensis]
          Length = 213

 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 51/126 (40%), Positives = 79/126 (62%), Gaps = 3/126 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           ++F L    +V  +++ V  V VP+ +G  GILP HV T+A LKPG+++V+E   V+ K 
Sbjct: 85  INFVLPY--QVELSSKEVDMVIVPATTGQMGILPGHVATIAELKPGLLSVHEGSDVN-KY 141

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           FVSSG   ++ +S   IIA EA P+D +D    +  L++   +LSSAS++  +AEAQI +
Sbjct: 142 FVSSGFAFIHANSYTDIIAVEAVPLDRIDREQVQKGLAEYTQKLSSASTDLERAEAQIGI 201

Query: 141 EVAEAL 146
           E   +L
Sbjct: 202 EFHSSL 207



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 45/73 (61%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG   ++ +S   IIA EA P+D +D    +  L++   +LSSAS++  +AEAQI
Sbjct: 140 KYFVSSGFAFIHANSYTDIIAVEAVPLDRIDREQVQKGLAEYTQKLSSASTDLERAEAQI 199

Query: 207 AVEVAEALVAAAS 219
            +E   +L A+ S
Sbjct: 200 GIEFHSSLNASLS 212


>gi|403218014|emb|CCK72506.1| hypothetical protein KNAG_0K01440 [Kazachstania naganishii CBS
           8797]
          Length = 157

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 77/144 (53%), Gaps = 8/144 (5%)

Query: 11  RLARRGYA-------DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAIL 63
           R A R YA       +++    +  ++  Y    V QV++P+ SG  G+L NH+PT+  L
Sbjct: 11  RRATRFYAAAATSAANELKLQFSLPHETLYDGSTVTQVNLPAQSGKIGVLANHIPTVEQL 70

Query: 64  KPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSE 123
            PG++ + E      K F+S G  T+  DS++ + A EA P++S        +LSKA++E
Sbjct: 71  SPGIVEILEQGKSPNKYFISGGFATMQPDSTLCVTAVEAFPLESFSPDNVSSLLSKAKNE 130

Query: 124 LSSASSETAKAEAQIAVEVAEALK 147
           L+S     A  EA+I V V E L+
Sbjct: 131 LNSQDERVA-TEAKIQVHVLEELQ 153



 Score = 46.2 bits (108), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 1/71 (1%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K F+S G  T+  DS++ + A EA P++S        +LSKA++EL+S     A  EA+I
Sbjct: 86  KYFISGGFATMQPDSTLCVTAVEAFPLESFSPDNVSSLLSKAKNELNSQDERVA-TEAKI 144

Query: 207 AVEVAEALVAA 217
            V V E L A+
Sbjct: 145 QVHVLEELQAS 155


>gi|116781731|gb|ABK22219.1| unknown [Picea sitchensis]
 gi|224285685|gb|ACN40558.1| unknown [Picea sitchensis]
          Length = 213

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 51/126 (40%), Positives = 78/126 (61%), Gaps = 3/126 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           ++F L    +V  +++ V  V VP+ +G  GILP HV T+A LKPG+++V+E   V+ K 
Sbjct: 85  INFVLPY--QVELSSKEVDMVIVPATTGQMGILPGHVATIAELKPGLLSVHEGSDVN-KY 141

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           FVSSG   ++ +S   IIA EA P+D +D    +  L++   +LSSAS++  +AEAQI +
Sbjct: 142 FVSSGFAFIHANSYTDIIAVEAVPLDKIDREQVQKGLAEYTQKLSSASTDLERAEAQIGI 201

Query: 141 EVAEAL 146
           E    L
Sbjct: 202 EFHSTL 207



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 44/73 (60%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG   ++ +S   IIA EA P+D +D    +  L++   +LSSAS++  +AEAQI
Sbjct: 140 KYFVSSGFAFIHANSYTDIIAVEAVPLDKIDREQVQKGLAEYTQKLSSASTDLERAEAQI 199

Query: 207 AVEVAEALVAAAS 219
            +E    L A+ S
Sbjct: 200 GIEFHSTLNASLS 212


>gi|118485281|gb|ABK94500.1| unknown [Populus trichocarpa]
          Length = 112

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/107 (43%), Positives = 70/107 (65%), Gaps = 1/107 (0%)

Query: 41  VDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAE 100
           V +P+ +G  G+LP HV  +  LKPGV++V+E   V +K FVSSG   ++ +S   I+A 
Sbjct: 2   VIIPASTGQMGVLPGHVSAITELKPGVLSVHEGNEV-KKYFVSSGFAFIHANSIADIVAV 60

Query: 101 EAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
           EA P+D +D+S  +  L++   +LSSAS++  KAEAQI V+V  AL 
Sbjct: 61  EAAPLDQIDSSLVQKGLAEFTQKLSSASTDLEKAEAQIGVDVHSALN 107



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 48/74 (64%)

Query: 144 EALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAE 203
           E  K FVSSG   ++ +S   I+A EA P+D +D+S  +  L++   +LSSAS++  KAE
Sbjct: 36  EVKKYFVSSGFAFIHANSIADIVAVEAAPLDQIDSSLVQKGLAEFTQKLSSASTDLEKAE 95

Query: 204 AQIAVEVAEALVAA 217
           AQI V+V  AL AA
Sbjct: 96  AQIGVDVHSALNAA 109


>gi|408399011|gb|EKJ78136.1| hypothetical protein FPSE_01597 [Fusarium pseudograminearum CS3096]
          Length = 1713

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 44/122 (36%), Positives = 73/122 (59%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
            +  +LA  ++  Y + +V QV++P+ SG  G+L NHVP++  LKPG++ V E    S++
Sbjct: 713 HIKLSLALPHQSIYKSHDVVQVNIPAESGEMGVLANHVPSIEQLKPGLVEVVEESAGSKQ 772

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 139
            F+S G  TV  +S + I A E +P++   A A R  +++AQ   + + SE   AEA+I 
Sbjct: 773 FFLSGGFATVQPNSVLSINAVEGYPLEDFSAEAIRAQIAEAQKVANGSGSEQDIAEAKIE 832

Query: 140 VE 141
           +E
Sbjct: 833 LE 834


>gi|363753304|ref|XP_003646868.1| hypothetical protein Ecym_5289 [Eremothecium cymbalariae
           DBVPG#7215]
 gi|356890504|gb|AET40051.1| hypothetical protein Ecym_5289 [Eremothecium cymbalariae
           DBVPG#7215]
          Length = 159

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/150 (38%), Positives = 83/150 (55%), Gaps = 11/150 (7%)

Query: 5   LVTSATRLARRGYAD-------QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHV 57
            V  A  ++RR YA+       ++ F L   +   Y    V QV++P  SG  GIL NHV
Sbjct: 10  FVKVANTISRRAYAEAASNEFLKLHFALP--HNTIYAGSKVTQVNLPVKSGHVGILANHV 67

Query: 58  PTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVL 117
           P +  L PGV+ V   EG S+K FVS G  TV  DS++ I + EA P++S  + + + +L
Sbjct: 68  PIVEQLVPGVVEV-VEEGASKKFFVSGGFATVQPDSTMSITSVEAFPLESFSSESIKSLL 126

Query: 118 SKAQSELSSASSETAKAEAQIAVEVAEALK 147
            +A+    SA  + A AEA I +EV EAL+
Sbjct: 127 VEAEKNAGSADQKIA-AEAAIQIEVLEALQ 155



 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 1/71 (1%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVS G  TV  DS++ I + EA P++S  + + + +L +A+    SA  + A AEA I
Sbjct: 88  KFFVSGGFATVQPDSTMSITSVEAFPLESFSSESIKSLLVEAEKNAGSADQKIA-AEAAI 146

Query: 207 AVEVAEALVAA 217
            +EV EAL AA
Sbjct: 147 QIEVLEALQAA 157


>gi|167999839|ref|XP_001752624.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162696155|gb|EDQ82495.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 190

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 69/112 (61%), Gaps = 1/112 (0%)

Query: 36  QNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSV 95
           + V  V VP+ SG  G+LP HVPT+A +KPG+++V+E   V +  FVSSG   V+ +S  
Sbjct: 73  KEVDMVIVPATSGQMGVLPGHVPTIAEMKPGIMSVHEGTDV-KNYFVSSGFAFVHANSVA 131

Query: 96  QIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
            I+A EA P+D  D    R  + +   ++S+A  +  +AEAQI +EV  AL+
Sbjct: 132 DIVAIEAVPLDRFDPEEVRKGVQEYTQKVSNAKEDLERAEAQIGLEVHSALQ 183



 Score = 46.2 bits (108), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 40/69 (57%)

Query: 149 FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 208
           FVSSG   V+ +S   I+A EA P+D  D    R  + +   ++S+A  +  +AEAQI +
Sbjct: 117 FVSSGFAFVHANSVADIVAIEAVPLDRFDPEEVRKGVQEYTQKVSNAKEDLERAEAQIGL 176

Query: 209 EVAEALVAA 217
           EV  AL AA
Sbjct: 177 EVHSALQAA 185


>gi|296228634|ref|XP_002759895.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like
           [Callithrix jacchus]
          Length = 130

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 35/66 (53%), Positives = 47/66 (71%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           QM FT AS  +VF+   NV+QVDVP+ +GAFGIL  HVPTL +L+PG++ V+  +G + K
Sbjct: 37  QMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTSK 96

Query: 80  IFVSSG 85
            F  SG
Sbjct: 97  YFGESG 102


>gi|441656833|ref|XP_003277094.2| PREDICTED: ATP synthase subunit delta, mitochondrial [Nomascus
           leucogenys]
          Length = 178

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 85/174 (48%), Gaps = 4/174 (2%)

Query: 46  FSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPV 105
            +GAFGIL  HVPTL +L+PG++   E    +      +G     +    + I+    P 
Sbjct: 5   LTGAFGILAAHVPTLQVLRPGLVLSPEPPAHALLRQRRTGARARQEVGGGERISGRGAP- 63

Query: 106 DSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEALKIF--VSSGTITVNDDSSV 163
            S      R  +   Q  L        +        +  + +    VSSG+I VN DSSV
Sbjct: 64  -SAGVGEQRAGVRGPQRALPHRPRCGPRRGCPALWGLTPSPRPIPPVSSGSIAVNADSSV 122

Query: 164 QIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEALVAA 217
           Q++AEEA  +D LD  AA+  L KAQ+EL  A+ E  +AE QI +E  EALV A
Sbjct: 123 QLLAEEAVTLDMLDLGAAKANLEKAQAELLGAADEATRAEIQIRIEANEALVKA 176


>gi|443895327|dbj|GAC72673.1| mitochondrial F1F0-ATP synthase, subunit delta/ATP16 [Pseudozyma
           antarctica T-34]
          Length = 168

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 70/113 (61%), Gaps = 5/113 (4%)

Query: 13  ARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVI 68
           ARRGYA    D++  +    ++  Y +  V QV++ + +G  GIL +HVP++  L+PGV+
Sbjct: 25  ARRGYAEAVSDKLKLSFILPHEAIYNSTEVTQVNIAASTGDMGILASHVPSVEELRPGVL 84

Query: 69  TVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQ 121
            V E+ G ++K FVS G  TV+ ++ + + A EA+P+D+    A R  LS+AQ
Sbjct: 85  EVVESSG-TKKWFVSGGFATVHPNNKLVVNAIEAYPLDNFSTEAVRSALSEAQ 136



 Score = 37.7 bits (86), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 30/50 (60%)

Query: 140 VEVAEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQ 189
           VE +   K FVS G  TV+ ++ + + A EA+P+D+    A R  LS+AQ
Sbjct: 87  VESSGTKKWFVSGGFATVHPNNKLVVNAIEAYPLDNFSTEAVRSALSEAQ 136


>gi|385304069|gb|EIF48104.1| atp synthase delta mitochondrial precursor [Dekkera bruxellensis
           AWRI1499]
          Length = 166

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 79/129 (61%), Gaps = 1/129 (0%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           ++++  ++A  ++    +++V QV++P+ +G  GIL NHVP +  L+PG++ ++++   S
Sbjct: 33  SNKLRLSIALPHQTVLKDKDVFQVNIPAATGDMGILANHVPVIEQLRPGIVEIFDSPXHS 92

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
            K F+S G  +V  +S + I++ EA  +   D++A +  L  A+  L S ++E   AEA 
Sbjct: 93  DKFFISGGFASVMPNSKMDILSVEAAXLKDFDSAAVKSQLXDAKKNLDS-TNENVAAEAS 151

Query: 138 IAVEVAEAL 146
           I VEV EAL
Sbjct: 152 IEVEVLEAL 160



 Score = 42.4 bits (98), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 1/73 (1%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K F+S G  +V  +S + I++ EA  +   D++A +  L  A+  L S ++E   AEA I
Sbjct: 94  KFFISGGFASVMPNSKMDILSVEAAXLKDFDSAAVKSQLXDAKKNLDS-TNENVAAEASI 152

Query: 207 AVEVAEALVAAAS 219
            VEV EAL AA S
Sbjct: 153 EVEVLEALNAALS 165


>gi|366998445|ref|XP_003683959.1| hypothetical protein TPHA_0A04520 [Tetrapisispora phaffii CBS 4417]
 gi|357522254|emb|CCE61525.1| hypothetical protein TPHA_0A04520 [Tetrapisispora phaffii CBS 4417]
          Length = 167

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 82/154 (53%), Gaps = 15/154 (9%)

Query: 5   LVTSATRLARRGYAD---------QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPN 55
           L+ SA   A+R YAD          +    A  +++ + +  V QV++P  SG  G+L N
Sbjct: 14  LINSA---AKRCYADAATSSALNTGLKLQFALPHEILFKDVTVTQVNLPVKSGQIGVLAN 70

Query: 56  HVPTLAILKPGVITVYE--TEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAA 113
           HVP    L PGV+ ++E  T    +K FVS G  TV  +S++ I + EA P++S      
Sbjct: 71  HVPMAEQLIPGVVEIFEEATNSTPKKFFVSGGFATVQPNSTLSITSVEAFPLESFSIENV 130

Query: 114 RDVLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
           +++L +A    +S S E   AEA I V+V EAL+
Sbjct: 131 KNLLVEANKNKTS-SDEKIAAEAAIQVDVLEALE 163



 Score = 43.1 bits (100), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 1/71 (1%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVS G  TV  +S++ I + EA P++S      +++L +A    +S S E   AEA I
Sbjct: 96  KFFVSGGFATVQPNSTLSITSVEAFPLESFSIENVKNLLVEANKNKTS-SDEKIAAEAAI 154

Query: 207 AVEVAEALVAA 217
            V+V EAL AA
Sbjct: 155 QVDVLEALEAA 165


>gi|171847358|gb|AAI61836.1| Unknown (protein for MGC:187332) [Rattus norvegicus]
          Length = 123

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 47/66 (71%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           QM FT AS  +VF+   NV+QVDVP+ +GAFGIL +HVPTL +L+PG++ V+  +G + K
Sbjct: 37  QMSFTFASPTQVFFDGANVRQVDVPTLTGAFGILASHVPTLQVLRPGLVVVHAEDGTTTK 96

Query: 80  IFVSSG 85
            F   G
Sbjct: 97  YFGECG 102


>gi|353234328|emb|CCA66354.1| probable ATP synthase delta chain precursor, mitochondrial
           [Piriformospora indica DSM 11827]
          Length = 162

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 82/156 (52%), Gaps = 10/156 (6%)

Query: 2   AARLVTSATRLAR-------RGYA---DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFG 51
           A R++ S+ R+AR       R YA   D++  +L   ++   +   V QV++P+ +G  G
Sbjct: 3   ALRMLASSMRVARPVISRNTRTYATAADKLKLSLVVPHQSLISGTEVSQVNIPAVTGDMG 62

Query: 52  ILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDAS 111
           IL  H P +  L+PGV+ V   +G S+K FVS G  T++  + + +   EA P++     
Sbjct: 63  ILSKHEPVIEELRPGVVEVKTLDGQSKKWFVSGGFATMHPHNELTVNVVEAAPLEDFSPE 122

Query: 112 AARDVLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
           A R  L++A    +    E  K EA+I V V EAL+
Sbjct: 123 AVRANLAEATRVANGNGPEKDKIEARIEVGVLEALQ 158


>gi|401626365|gb|EJS44314.1| atp16p [Saccharomyces arboricola H-6]
          Length = 160

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 83/148 (56%), Gaps = 8/148 (5%)

Query: 6   VTSATRLARRGYADQ------MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPT 59
           + S   +A+R YA+       +    A  ++  Y+   V QV++P+ SG  G+L NHVPT
Sbjct: 11  LRSLNFVAKRTYAEAAAAAPGLKLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPT 70

Query: 60  LAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSK 119
           +  L PG++ V E    S+K F+S G  TV  DS + + A EA P++S      + +L++
Sbjct: 71  VEQLLPGIVEVIEGSK-SKKFFISGGFATVQPDSQLCVTAIEAFPLESFSQENIKSLLTE 129

Query: 120 AQSELSSASSETAKAEAQIAVEVAEALK 147
           A+  +SS+ +  A AEA I V+V E L+
Sbjct: 130 AKQNVSSSDAREA-AEAVIQVDVLENLQ 156


>gi|407783444|ref|ZP_11130644.1| F-type H+-transporting ATPase subunit epsilon [Oceanibaculum
           indicum P24]
 gi|407201569|gb|EKE71567.1| F-type H+-transporting ATPase subunit epsilon [Oceanibaculum
           indicum P24]
          Length = 136

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 70/129 (54%), Gaps = 4/129 (3%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           A+  +F L S  K+   +Q V+ V VP   G FG+LP H P ++ L PGVI +YE   V 
Sbjct: 2   AETTNFELVSPEKLL-VSQPVEMVVVPGAEGYFGVLPRHAPFISTLIPGVIQIYEGGQVK 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           ++IFV+ G   V +D    ++AE A P+  +D +A    L     +L  A S+  KA  Q
Sbjct: 61  ERIFVAGGFAEVTEDRCT-VLAEVAMPMGEIDRAAVEQTLKNLAEDLQEAKSDAEKAAVQ 119

Query: 138 --IAVEVAE 144
             IAVE A+
Sbjct: 120 DKIAVEQAK 128


>gi|342889302|gb|EGU88457.1| hypothetical protein FOXB_01060 [Fusarium oxysporum Fo5176]
          Length = 897

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 74/121 (61%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           +  +LA  ++  Y +Q+V QV++P+ SG  G+L NHVP++  LKPG++ V E    S++ 
Sbjct: 50  IKLSLALPHQSIYKSQDVVQVNIPAESGEMGVLANHVPSIEQLKPGLVEVVEESAGSKQF 109

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           F+S G  TV  +S + I A E +P++   A A R  +++AQ   + + SE   AEA+I +
Sbjct: 110 FLSGGFATVQPNSVLSINAVEGYPLEDFSAEAIRAQIAEAQKVANGSGSEQDIAEAKIEL 169

Query: 141 E 141
           E
Sbjct: 170 E 170


>gi|322707343|gb|EFY98922.1| ATP synthase delta chain [Metarhizium anisopliae ARSEF 23]
          Length = 175

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 80/153 (52%), Gaps = 26/153 (16%)

Query: 14  RRGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYET 73
           RR YA+      A  +K  Y +Q+V QV++P+ SG  G+L NHVP++  LKPG++ V E 
Sbjct: 24  RRTYAE------AVPDKSIYRSQDVIQVNIPAESGEMGVLANHVPSIEQLKPGIVEVVEE 77

Query: 74  EGVSQKIF--------------------VSSGTITVNDDSSVQIIAEEAHPVDSLDASAA 113
              S++ F                    ++ G  TV  +S++ I A E +P++   A A 
Sbjct: 78  SAGSKQFFRMWRPVLHRYLDTPVGEHWPIAGGFATVQPNSTMSINAIEGYPLEDFSAEAV 137

Query: 114 RDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           R  +++AQ   S + SE   AEA+I +EV E L
Sbjct: 138 RAGIAEAQKVASGSGSEQDIAEAKIELEVLETL 170


>gi|119189503|ref|XP_001245358.1| hypothetical protein CIMG_04799 [Coccidioides immitis RS]
 gi|303323029|ref|XP_003071506.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|240111208|gb|EER29361.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|320033316|gb|EFW15264.1| ATP synthase subunit delta [Coccidioides posadasii str. Silveira]
 gi|392868263|gb|EAS34022.2| ATP synthase subunit delta, mitochondrial [Coccidioides immitis RS]
          Length = 165

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 86/158 (54%), Gaps = 13/158 (8%)

Query: 3   ARLVTSATR---------LARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGA 49
           AR   SA R         + +R YA    D++  +L   ++  Y + +V QV++ + SG 
Sbjct: 4   ARFARSALRARPAAFRLPIQQRTYAQAVSDKLRLSLVLPHETIYKSADVVQVNIAAESGD 63

Query: 50  FGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLD 109
            GIL +HVP++  L+PG+I + E  G ++K F++ G   V  DS++ I A E   ++   
Sbjct: 64  MGILSSHVPSIEQLRPGLIEIIEESGQTKKFFLAGGFAVVQPDSNLSINAVEGFALEDFS 123

Query: 110 ASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
           A A +  + +AQ   + + SE   AEA++ +EV E+L+
Sbjct: 124 ADAVKSQIGEAQRIAAGSGSEQDIAEAKVELEVLESLQ 161



 Score = 37.4 bits (85), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%)

Query: 137 QIAVEVAEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS 196
           +I  E  +  K F++ G   V  DS++ I A E   ++   A A +  + +AQ   + + 
Sbjct: 83  EIIEESGQTKKFFLAGGFAVVQPDSNLSINAVEGFALEDFSADAVKSQIGEAQRIAAGSG 142

Query: 197 SETAKAEAQIAVEVAEALVAA 217
           SE   AEA++ +EV E+L AA
Sbjct: 143 SEQDIAEAKVELEVLESLQAA 163


>gi|2493047|sp|Q41000.1|ATP4_PEA RecName: Full=ATP synthase subunit delta', mitochondrial; AltName:
           Full=F-ATPase delta' subunit; Flags: Precursor
 gi|294087|gb|AAA33646.1| F1-ATPase delta-prime subunit [Pisum sativum]
          Length = 197

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/111 (43%), Positives = 69/111 (62%), Gaps = 4/111 (3%)

Query: 39  KQVD---VPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSV 95
           K+VD   +P+ +G  G+LP HV T+A LKPGV+TV E    + K FVSSG   ++ +S  
Sbjct: 82  KEVDSVIIPATTGEMGVLPGHVATIAELKPGVLTVQEGTDTT-KYFVSSGFRFIHANSVA 140

Query: 96  QIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
            IIA EA PV+ LD    +  L +   +L+SA+++  K EAQI ++V  AL
Sbjct: 141 DIIAVEAVPVNQLDRDLVQKGLQEFTQKLNSATTDLEKREAQIGIDVDSAL 191



 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 45/77 (58%)

Query: 141 EVAEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETA 200
           E  +  K FVSSG   ++ +S   IIA EA PV+ LD    +  L +   +L+SA+++  
Sbjct: 118 EGTDTTKYFVSSGFRFIHANSVADIIAVEAVPVNQLDRDLVQKGLQEFTQKLNSATTDLE 177

Query: 201 KAEAQIAVEVAEALVAA 217
           K EAQI ++V  AL +A
Sbjct: 178 KREAQIGIDVDSALNSA 194


>gi|168000450|ref|XP_001752929.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162696092|gb|EDQ82433.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 206

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 45/112 (40%), Positives = 68/112 (60%), Gaps = 1/112 (0%)

Query: 36  QNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSV 95
           + V  V VP+ SG  G+LP HVPT+A LKPG+++V+E   V Q  FVSSG   V+ +S  
Sbjct: 89  KEVDMVIVPATSGQMGVLPGHVPTIAELKPGLMSVHEGADVKQ-YFVSSGFAFVHANSVA 147

Query: 96  QIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
            I+A EA  +D  D    +  + +   ++++A  +  +AEAQI +EV  AL+
Sbjct: 148 DIVAIEAVSLDKFDPEEVKKGVQEYTQKVANAKDDLERAEAQIGLEVHSALQ 199



 Score = 40.0 bits (92), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%)

Query: 141 EVAEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETA 200
           E A+  + FVSSG   V+ +S   I+A EA  +D  D    +  + +   ++++A  +  
Sbjct: 125 EGADVKQYFVSSGFAFVHANSVADIVAIEAVSLDKFDPEEVKKGVQEYTQKVANAKDDLE 184

Query: 201 KAEAQIAVEVAEALVAA 217
           +AEAQI +EV  AL AA
Sbjct: 185 RAEAQIGLEVHSALQAA 201


>gi|358341595|dbj|GAA49229.1| F-type H+-transporting ATPase subunit delta [Clonorchis sinensis]
          Length = 185

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/82 (51%), Positives = 58/82 (70%), Gaps = 1/82 (1%)

Query: 66  GVITVYETEGVSQKIF-VSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSEL 124
           G    Y     S+ +F +SSGT+TVN DSS+Q++AEEA  +D LD  A ++ L++AQ+EL
Sbjct: 52  GTCVGYRIGRYSEILFWMSSGTVTVNSDSSMQVLAEEAATLDQLDVHAVKEGLTRAQAEL 111

Query: 125 SSASSETAKAEAQIAVEVAEAL 146
            SA ++ +KAEAQIAVEV E L
Sbjct: 112 LSAQTDASKAEAQIAVEVYEEL 133



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 38/67 (56%), Positives = 53/67 (79%)

Query: 148 IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 207
            ++SSGT+TVN DSS+Q++AEEA  +D LD  A ++ L++AQ+EL SA ++ +KAEAQIA
Sbjct: 67  FWMSSGTVTVNSDSSMQVLAEEAATLDQLDVHAVKEGLTRAQAELLSAQTDASKAEAQIA 126

Query: 208 VEVAEAL 214
           VEV E L
Sbjct: 127 VEVYEEL 133


>gi|328867932|gb|EGG16313.1| ATP synthase F1 delta [Dictyostelium fasciculatum]
          Length = 177

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 7/147 (4%)

Query: 7   TSATRLARRGYA-------DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPT 59
           +S    ARR YA       + + F+    ++V + ++ V+ + +P      G+L +HVP 
Sbjct: 16  SSVNTFARRTYATDAGANEELLTFSFMVPHQVIFKDKKVQMITLPGAKSVMGVLKHHVPN 75

Query: 60  LAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSK 119
           +A LKPGV+ +      ++  F+S G   +N D+S  + A EA P+D +D +  ++ L K
Sbjct: 76  IAELKPGVVAIQHDANTTENYFISGGFAFINPDASCYVNAVEAVPLDQIDPTEVKNGLQK 135

Query: 120 AQSELSSASSETAKAEAQIAVEVAEAL 146
                + A  E  KA A I +E  + +
Sbjct: 136 YTQLYNEAVDEKDKAIALIGLETHQHM 162



 Score = 37.7 bits (86), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 35/69 (50%)

Query: 149 FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 208
           F+S G   +N D+S  + A EA P+D +D +  ++ L K     + A  E  KA A I +
Sbjct: 97  FISGGFAFINPDASCYVNAVEAVPLDQIDPTEVKNGLQKYTQLYNEAVDEKDKAIALIGL 156

Query: 209 EVAEALVAA 217
           E  + +  A
Sbjct: 157 ETHQHMAHA 165


>gi|168057759|ref|XP_001780880.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667662|gb|EDQ54286.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 164

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 69/112 (61%), Gaps = 4/112 (3%)

Query: 39  KQVD---VPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSV 95
           K+VD   VP+ SG  G+LP HVPT+A LKPG+++V+E   V Q  FVSSG   V+ +S  
Sbjct: 51  KEVDMVIVPATSGQMGVLPGHVPTIAELKPGLMSVHEGSDVKQ-YFVSSGFAFVHANSVA 109

Query: 96  QIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
            I+A EA  +D  D    +  + +   ++++A  +  +AEAQI +EV  AL+
Sbjct: 110 DIVAIEAVSLDKFDPEEVKKGVQEYTQKVANAKDDLERAEAQIGLEVHSALQ 161



 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 40/71 (56%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           + FVSSG   V+ +S   I+A EA  +D  D    +  + +   ++++A  +  +AEAQI
Sbjct: 93  QYFVSSGFAFVHANSVADIVAIEAVSLDKFDPEEVKKGVQEYTQKVANAKDDLERAEAQI 152

Query: 207 AVEVAEALVAA 217
            +EV  AL AA
Sbjct: 153 GLEVHSALQAA 163


>gi|358059613|dbj|GAA94604.1| hypothetical protein E5Q_01256 [Mixia osmundae IAM 14324]
          Length = 210

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 5/104 (4%)

Query: 12  LARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGV 67
           L RRGYA    D++  +L   ++V + +Q V QV++ + SG  GIL NHVP++  LKPGV
Sbjct: 30  LLRRGYAEAASDKLRLSLVLPHEVIFESQEVLQVNLAAQSGDMGILANHVPSIESLKPGV 89

Query: 68  ITVYETEGV-SQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDA 110
           + V E  G  ++K FVS G   ++  + + I A EA+P+D   A
Sbjct: 90  VEVIEQNGQEAKKWFVSGGFANIHPSNLLTINAVEAYPLDQFSA 133


>gi|258566011|ref|XP_002583750.1| ATP synthase F1, epsilon subunit [Uncinocarpus reesii 1704]
 gi|237907451|gb|EEP81852.1| ATP synthase F1, epsilon subunit [Uncinocarpus reesii 1704]
          Length = 173

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 74/124 (59%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           A+++  +L   ++  Y + +V QV++ + SG  GIL +HVP++  L+PG I + E  G +
Sbjct: 32  AEKLRLSLVLPHETIYKSADVVQVNIAAESGDMGILSSHVPSIEQLRPGPIEIIEENGQT 91

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           +K F++ G   V  DS++ I A E  P++   A A +  +++AQ  ++S  SE   AEA+
Sbjct: 92  KKFFLAGGFAVVQPDSNLSINAVEGFPLEDFSADAVKSQIAEAQKVVASTGSEQDIAEAK 151

Query: 138 IAVE 141
           + +E
Sbjct: 152 VELE 155



 Score = 37.7 bits (86), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 40/73 (54%)

Query: 137 QIAVEVAEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS 196
           +I  E  +  K F++ G   V  DS++ I A E  P++   A A +  +++AQ  ++S  
Sbjct: 83  EIIEENGQTKKFFLAGGFAVVQPDSNLSINAVEGFPLEDFSADAVKSQIAEAQKVVASTG 142

Query: 197 SETAKAEAQIAVE 209
           SE   AEA++ +E
Sbjct: 143 SEQDIAEAKVELE 155


>gi|429240766|ref|NP_596259.2| F1-ATPase delta subunit (predicted) [Schizosaccharomyces pombe
           972h-]
 gi|395398424|sp|Q9P6R6.2|ATPD_SCHPO RecName: Full=ATP synthase subunit delta, mitochondrial; AltName:
           Full=F-ATPase delta subunit; Flags: Precursor
 gi|347834354|emb|CAB89879.2| F1-ATPase delta subunit (predicted) [Schizosaccharomyces pombe]
          Length = 167

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 15  RGYA------DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVI 68
           RGYA      +++  ++A   +  Y    V QVD+P+  G  GIL +HVP +  LKPGVI
Sbjct: 26  RGYAQAVQKNEKLVLSMALPYQTIYEKVPVTQVDIPAEDGEMGILKDHVPMIQCLKPGVI 85

Query: 69  TVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS 128
           +V +      K F+S G       + + I   EA+ ++   +S A  +L K ++E++S S
Sbjct: 86  SVTDESSNKSKYFISGGFAVQQPSNELSITVPEAYKLEDFSSSVANQLLEKHKAEMNS-S 144

Query: 129 SETAKAEAQIAVEVAEAL 146
            E   AEA + V V E+L
Sbjct: 145 DEGVAAEAAVRVSVLESL 162


>gi|254566933|ref|XP_002490577.1| Delta subunit of the central stalk of mitochondrial F1F0 ATP
           synthase [Komagataella pastoris GS115]
 gi|238030373|emb|CAY68296.1| Delta subunit of the central stalk of mitochondrial F1F0 ATP
           synthase [Komagataella pastoris GS115]
 gi|328350964|emb|CCA37364.1| F-type H+-transporting ATPase subunit delta [Komagataella pastoris
           CBS 7435]
          Length = 161

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 6/124 (4%)

Query: 9   ATRLARRGYA------DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAI 62
           A  +A+R YA      D +  +LA  ++    N+   QV++P  SG  G+L NHVP +  
Sbjct: 13  ANLMAKRTYAEAAATSDVLKVSLALPHETIIDNKEAAQVNLPGASGELGVLANHVPIVEE 72

Query: 63  LKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQS 122
           LKPGV+ V ++ G S K F+S G  ++  +S + I   EA  +DS  A     +L+++Q 
Sbjct: 73  LKPGVVEVLDSAGKSDKYFISGGVASIQPNSKLSISTIEAFTLDSFSAEEINRLLAESQK 132

Query: 123 ELSS 126
            +SS
Sbjct: 133 NVSS 136


>gi|254292531|ref|YP_003058554.1| ATP synthase F1 subunit epsilon [Hirschia baltica ATCC 49814]
 gi|254041062|gb|ACT57857.1| ATP synthase F1, epsilon subunit [Hirschia baltica ATCC 49814]
          Length = 131

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 72/129 (55%), Gaps = 3/129 (2%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           +D++ F+L S  +  ++ + V QVD P   G FG+LP H P +  LK GV+ V+E +  +
Sbjct: 2   SDKLHFSLVSPERELFSGE-VDQVDAPGSEGQFGVLPGHAPFMTTLKAGVVEVFEGDART 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
            ++FV SG   V     + ++AEEA  +D  DASA++  L++AQ  L +A  +  K    
Sbjct: 61  -RLFVRSGFADVT-PQGLTVLAEEAINLDGFDASASKTALAEAQDALIAAEDDHEKEHLT 118

Query: 138 IAVEVAEAL 146
             +   EAL
Sbjct: 119 ETITYLEAL 127



 Score = 38.9 bits (89), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 140 VEVAEA---LKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS 196
           VEV E     ++FV SG   V     + ++AEEA  +D  DASA++  L++AQ  L +A 
Sbjct: 51  VEVFEGDARTRLFVRSGFADVTP-QGLTVLAEEAINLDGFDASASKTALAEAQDALIAAE 109

Query: 197 SETAKAEAQIAVEVAEALVAAA 218
            +  K      +   EAL+AAA
Sbjct: 110 DDHEKEHLTETITYLEALIAAA 131


>gi|402820269|ref|ZP_10869836.1| hypothetical protein IMCC14465_10700 [alpha proteobacterium
           IMCC14465]
 gi|402511012|gb|EJW21274.1| hypothetical protein IMCC14465_10700 [alpha proteobacterium
           IMCC14465]
          Length = 128

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 74/129 (57%), Gaps = 3/129 (2%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           +D++ F + S  K  ++ + V  V VP   G FG+L NH P +++L+PG++ V E  G +
Sbjct: 2   SDRLTFDMVSPEKHLFSAE-VDVVTVPGSEGDFGVLANHSPMMSVLRPGIVLV-EDGGTT 59

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
            + FV  G   V  D  + I+AE+A  VD  D  A +D +++A+S + + + E  KAEA+
Sbjct: 60  TRYFVQGGFADVTPD-GLTILAEQALAVDGDDKDALQDAVTQARSRVEAETDEQKKAEAE 118

Query: 138 IAVEVAEAL 146
             + V E +
Sbjct: 119 TVLRVLEEI 127



 Score = 37.7 bits (86), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 1/69 (1%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           + FV  G   V  D  + I+AE+A  VD  D  A +D +++A+S + + + E  KAEA+ 
Sbjct: 61  RYFVQGGFADVTPDG-LTILAEQALAVDGDDKDALQDAVTQARSRVEAETDEQKKAEAET 119

Query: 207 AVEVAEALV 215
            + V E ++
Sbjct: 120 VLRVLEEIL 128


>gi|156841501|ref|XP_001644123.1| hypothetical protein Kpol_1053p1 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114759|gb|EDO16265.1| hypothetical protein Kpol_1053p1 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 109

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 5/107 (4%)

Query: 44  PSFSGAFGILPNHVPTLAILKPGVITVYETEGVS---QKIFVSSGTITVNDDSSVQIIAE 100
           P  SG  G+L NHVP +  L PGVI ++E E VS   +K FVS G  +V  DS++ I + 
Sbjct: 1   PVKSGHIGVLANHVPIVEQLTPGVIEIFE-ESVSSAPKKFFVSGGFASVQPDSTLSITSA 59

Query: 101 EAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
           EA P+DS  +   R++L++A    SS  ++ A AEA I +EV EAL+
Sbjct: 60  EAFPLDSFSSENIRNLLAEANKNKSSTDTKVA-AEADIQIEVLEALQ 105



 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 1/71 (1%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVS G  +V  DS++ I + EA P+DS  +   R++L++A    SS  ++ A AEA I
Sbjct: 38  KFFVSGGFASVQPDSTLSITSAEAFPLDSFSSENIRNLLAEANKNKSSTDTKVA-AEADI 96

Query: 207 AVEVAEALVAA 217
            +EV EAL AA
Sbjct: 97  QIEVLEALQAA 107


>gi|384245874|gb|EIE19366.1| hypothetical protein COCSUDRAFT_48924 [Coccomyxa subellipsoidea
           C-169]
          Length = 206

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 71/116 (61%), Gaps = 4/116 (3%)

Query: 35  NQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYET-EGVSQKIFVSSGTITVNDDS 93
           +  V  V +P+ +G FG++P HVPT+A L+PGV+TV++T +   +K FVSSG   V+ DS
Sbjct: 85  DSKVDLVLLPALTGDFGVMPGHVPTVAQLRPGVVTVHKTLDKEIEKYFVSSGFAFVHADS 144

Query: 94  SVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAE---AQIAVEVAEAL 146
           S  + A EA  ++ LD  A R  L++  ++L +  ++    E   AQI VEV  A+
Sbjct: 145 STDVCAVEAVKLEDLDPEAVRAGLAEYTAKLGALQAKGDDYEIAAAQIGVEVYSAM 200



 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAE--- 203
           K FVSSG   V+ DSS  + A EA  ++ LD  A R  L++  ++L +  ++    E   
Sbjct: 130 KYFVSSGFAFVHADSSTDVCAVEAVKLEDLDPEAVRAGLAEYTAKLGALQAKGDDYEIAA 189

Query: 204 AQIAVEVAEALVAA 217
           AQI VEV  A+ AA
Sbjct: 190 AQIGVEVYSAMNAA 203


>gi|321252504|ref|XP_003192428.1| ATP synthase delta chain, mitochondrial precursor [Cryptococcus
           gattii WM276]
 gi|317458896|gb|ADV20641.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Cryptococcus gattii WM276]
          Length = 104

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 1/99 (1%)

Query: 50  FGILPNHVPTLAILKPGVITVYETEGV-SQKIFVSSGTITVNDDSSVQIIAEEAHPVDSL 108
            G+L NHVP++  L+PGVI V E  G   +K FVS+G  TV+ ++S+ I A EA+P+D  
Sbjct: 1   MGVLSNHVPSVEALRPGVIEVIEENGQQGKKWFVSAGFATVHGNNSLTINAVEAYPLDKF 60

Query: 109 DASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
                +  L+ A   L S + E+ KAEA+I V+V E L+
Sbjct: 61  SLENIKSGLADANRVLGSNAPESEKAEARIEVDVYEGLQ 99



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/73 (42%), Positives = 44/73 (60%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVS+G  TV+ ++S+ I A EA+P+D       +  L+ A   L S + E+ KAEA+I
Sbjct: 31  KWFVSAGFATVHGNNSLTINAVEAYPLDKFSLENIKSGLADANRVLGSNAPESEKAEARI 90

Query: 207 AVEVAEALVAAAS 219
            V+V E L AA S
Sbjct: 91  EVDVYEGLQAALS 103


>gi|392381408|ref|YP_005030605.1| ATP synthase, F1 sector, epsilon subunit epsilon [Azospirillum
           brasilense Sp245]
 gi|356876373|emb|CCC97138.1| ATP synthase, F1 sector, epsilon subunit epsilon [Azospirillum
           brasilense Sp245]
          Length = 137

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 70/126 (55%), Gaps = 4/126 (3%)

Query: 17  YADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGV 76
            AD+++F L S  K+  T+Q V  V VP   G FG+L  H P ++ ++PGVI VYE + V
Sbjct: 1   MADKVEFELVSPEKLL-TSQPVDMVVVPGSEGDFGVLAGHSPMISTVRPGVIDVYEADRV 59

Query: 77  SQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASS--ETAKA 134
             ++FV+ G   V  ++   ++AEEA  V  +D +     +     +L  A S  E A+ 
Sbjct: 60  VDRVFVAGGFAEVT-ETRCTVLAEEAIAVAEIDRAKVEQQIRDLGEDLEDAKSDDEKARV 118

Query: 135 EAQIAV 140
           EA+IA+
Sbjct: 119 EAKIAI 124


>gi|108763162|ref|YP_635035.1| ATP synthase F0F1 subunit epsilon [Myxococcus xanthus DK 1622]
 gi|119367749|sp|Q1CX38.1|ATPE_MYXXD RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|108467042|gb|ABF92227.1| ATP synthase F1, epsilon subunit [Myxococcus xanthus DK 1622]
          Length = 136

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 61/106 (57%), Gaps = 2/106 (1%)

Query: 43  VPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEA 102
           VP   G FG+ P H P L++++PG +T+ E+ G  +  FV+ G + V +D  V ++A+ A
Sbjct: 25  VPGGRGLFGVRPGHTPFLSLMEPGALTLIES-GRRESYFVAGGFVEVGNDK-VLVLADAA 82

Query: 103 HPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEALKI 148
            PV  +D   AR  +++AQ  +   SSE A+ E + A    EA +I
Sbjct: 83  EPVTGIDVEGARRRMAEAQERMKGMSSEDARFELEQATVRREAARI 128



 Score = 40.0 bits (92), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)

Query: 149 FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 207
           FV+ G + V +D  V ++A+ A PV  +D   AR  +++AQ  +   SSE A+ E + A
Sbjct: 62  FVAGGFVEVGNDK-VLVLADAAEPVTGIDVEGARRRMAEAQERMKGMSSEDARFELEQA 119


>gi|226470592|emb|CAX70576.1| F-type H+-transporting ATPase delta chain [Schistosoma japonicum]
          Length = 112

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 43/62 (69%)

Query: 20 QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
          ++  T AS  +VFY +  V+QVDVP+ +G FG+LP HVPT+  LKPGV+ + E +G  +K
Sbjct: 27 ELKLTFASSGQVFYNSVAVRQVDVPTLNGRFGVLPEHVPTVGCLKPGVVAITENDGSMKK 86

Query: 80 IF 81
           F
Sbjct: 87 YF 88


>gi|338532026|ref|YP_004665360.1| F0F1 ATP synthase subunit epsilon [Myxococcus fulvus HW-1]
 gi|337258122|gb|AEI64282.1| F0F1 ATP synthase subunit epsilon [Myxococcus fulvus HW-1]
          Length = 136

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 2/106 (1%)

Query: 43  VPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEA 102
           VP   G FG+ P H P L++++PG +T+ E  G  +  FV+ G + V +D  V ++A+ A
Sbjct: 25  VPGGRGLFGVRPGHTPFLSLMEPGALTLIEG-GRRESYFVAGGFVEVGNDK-VLVLADAA 82

Query: 103 HPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEALKI 148
            PV  +D   AR  +++AQ  L   SSE A+ E + A    EA +I
Sbjct: 83  EPVTGIDVDGARRRMAEAQERLKGLSSEDARFELEQATVRREAARI 128



 Score = 40.8 bits (94), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 149 FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 208
           FV+ G + V +D  V ++A+ A PV  +D   AR  +++AQ  L   SSE A+ E + A 
Sbjct: 62  FVAGGFVEVGNDK-VLVLADAAEPVTGIDVDGARRRMAEAQERLKGLSSEDARFELEQAT 120

Query: 209 EVAEA 213
              EA
Sbjct: 121 VRREA 125


>gi|71664003|ref|XP_818987.1| ATP synthase, epsilon chain [Trypanosoma cruzi strain CL Brener]
 gi|70884268|gb|EAN97136.1| ATP synthase, epsilon chain, putative [Trypanosoma cruzi]
          Length = 183

 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 67/128 (52%)

Query: 19  DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQ 78
           + + FTL   ++       VK V V   +G +GI P H   +  L P  +TV  T+G ++
Sbjct: 48  ETLRFTLTRQDEFLMRENPVKCVTVTGVNGEYGIYPGHAYKIVQLVPAPLTVEFTDGTTK 107

Query: 79  KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 138
           K FVS G   +N++ S  + A E   ++ LD SAA   L+  Q+ L SA  E AKA  +I
Sbjct: 108 KYFVSGGFAHINNEGSCDVNAVECVAMEDLDLSAAEKALAAQQASLGSAKDEKAKAVIEI 167

Query: 139 AVEVAEAL 146
            + V E++
Sbjct: 168 RISVLESV 175



 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 41/71 (57%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVS G   +N++ S  + A E   ++ LD SAA   L+  Q+ L SA  E AKA  +I
Sbjct: 108 KYFVSGGFAHINNEGSCDVNAVECVAMEDLDLSAAEKALAAQQASLGSAKDEKAKAVIEI 167

Query: 207 AVEVAEALVAA 217
            + V E+++AA
Sbjct: 168 RISVLESVIAA 178


>gi|449017837|dbj|BAM81239.1| mitochondrial F-type ATPase F1 subunit delta, precursor
           [Cyanidioschyzon merolae strain 10D]
          Length = 185

 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 80/143 (55%), Gaps = 9/143 (6%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           A ++       ++V   N+ V  V VP+ SG  GILPNHVPT+A ++PGV+T+    G  
Sbjct: 42  AGRVTLNFFCPHQVIAKNRQVVSVIVPAASGLMGILPNHVPTVAQMRPGVVTIIGDGGAE 101

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSE----TAK 133
           ++ FVSSG   V+ D +  I A EA  V  +D       L+  +++L+S+SS     TA+
Sbjct: 102 ERYFVSSGFTFVHPDRT-DICAVEAVRVSDIDPEEVSKALADCEAKLASSSSSAAAGTAE 160

Query: 134 AE----AQIAVEVAEALKIFVSS 152
           A+    AQI V+V  A++  VS 
Sbjct: 161 AQRAAVAQIGVDVYLAMQGVVSG 183


>gi|240279766|gb|EER43271.1| ATP synthase subunit delta [Ajellomyces capsulatus H143]
          Length = 180

 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/107 (38%), Positives = 64/107 (59%), Gaps = 11/107 (10%)

Query: 12  LARRGYAD----QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGV 67
           L RRGYAD    ++  +L+      Y + +V QV++P+ SG  G+L NHVP++  L PG+
Sbjct: 78  LQRRGYADAVADKLKLSLS-----IYKSTDVVQVNIPAESGVMGVLANHVPSIEQLNPGL 132

Query: 68  ITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAAR 114
           + + E  G +++ F+S G   V  DS + I A EA+P++  D SA R
Sbjct: 133 VEIIEESGGTKQFFLSGGFAVVQPDSQLSINAVEAYPLE--DFSAER 177


>gi|390476620|ref|XP_003735154.1| PREDICTED: uncharacterized protein LOC100897018 [Callithrix
           jacchus]
          Length = 586

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/75 (54%), Positives = 52/75 (69%)

Query: 143 AEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKA 202
           A    + +SSG++TVN DSSVQ++AEEA  +D LD  AA+  L KAQ+ELS A+ E  KA
Sbjct: 510 APGAGVPMSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELSGAADEATKA 569

Query: 203 EAQIAVEVAEALVAA 217
           E QI +E  EALV A
Sbjct: 570 EIQIRIEANEALVKA 584



 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/67 (56%), Positives = 49/67 (73%)

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 139
           + +SSG++TVN DSSVQ++AEEA  +D LD  AA+  L KAQ+ELS A+ E  KAE QI 
Sbjct: 515 VPMSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELSGAADEATKAEIQIR 574

Query: 140 VEVAEAL 146
           +E  EAL
Sbjct: 575 IEANEAL 581


>gi|444321775|ref|XP_004181543.1| hypothetical protein TBLA_0G00770 [Tetrapisispora blattae CBS 6284]
 gi|387514588|emb|CCH62024.1| hypothetical protein TBLA_0G00770 [Tetrapisispora blattae CBS 6284]
          Length = 166

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 74/132 (56%), Gaps = 4/132 (3%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
            + + F  A  ++V    + VKQV++P  SG  GIL NHVP    L PG+I V+E EG +
Sbjct: 33  GNTLKFQFALPHEVLVDGKTVKQVNLPVRSGQIGILANHVPITEQLDPGLIEVFE-EGQN 91

Query: 78  Q--KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAE 135
              K FVS G  ++  DS++ + + EA P++S        +L++A+ ++S +      AE
Sbjct: 92  DPTKYFVSGGFASMQPDSTLCVTSVEAFPLESFSKDKISSLLAEAK-KISESKEGKEAAE 150

Query: 136 AQIAVEVAEALK 147
           A I VEV + L+
Sbjct: 151 AAIQVEVLQKLQ 162


>gi|50551323|ref|XP_503135.1| YALI0D22022p [Yarrowia lipolytica]
 gi|49649003|emb|CAG81333.1| YALI0D22022p [Yarrowia lipolytica CLIB122]
          Length = 137

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 53/89 (59%)

Query: 33  YTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDD 92
           Y  + V QV++PS +G  GIL NHVPT+  LKPGV+ V ET G ++  F+S G  TV  D
Sbjct: 20  YNQKEVTQVNIPSTAGELGILANHVPTIQQLKPGVVEVIETNGETKSYFISGGFATVQPD 79

Query: 93  SSVQIIAEEAHPVDSLDASAARDVLSKAQ 121
           S + + + EA   +     A + + ++AQ
Sbjct: 80  SELSVNSIEAFQAEDFSPEAIKSLTAEAQ 108


>gi|114571339|ref|YP_758019.1| ATP synthase F1 subunit epsilon [Maricaulis maris MCS10]
 gi|119367744|sp|Q0AKW2.1|ATPE_MARMM RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|114341801|gb|ABI67081.1| ATP synthase F1 subcomplex epsilon subunit [Maricaulis maris MCS10]
          Length = 133

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 74/131 (56%), Gaps = 5/131 (3%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           AD++ F L S  +  +   NV QV VP   G FG+LPNH P +++++PG ITV + +G  
Sbjct: 2   ADKLHFDLVSPERRLFAG-NVDQVVVPGEEGDFGVLPNHAPFMSVIRPGAITVID-DGKE 59

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASA-ARDVLSKAQSELSSASSETAKAEA 136
            + F+  G   V   + + I+AEEA  V  +D    ARD LS A+ ++++A  E  + +A
Sbjct: 60  TRTFIHGGFAEVT-AAGLTILAEEAIAVADIDTEKLARD-LSDAREDVTAAKDEEERDQA 117

Query: 137 QIAVEVAEALK 147
              V   EA++
Sbjct: 118 AALVAKYEAMQ 128


>gi|389878841|ref|YP_006372406.1| F-type H+-transporting ATPase subunit epsilon [Tistrella mobilis
           KA081020-065]
 gi|388529625|gb|AFK54822.1| F-type H+-transporting ATPase epsilon chain [Tistrella mobilis
           KA081020-065]
          Length = 133

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 2/130 (1%)

Query: 17  YADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGV 76
            +D++ F L S  ++    ++V  V VP   G FG+LP H P +A ++PGVI VYE + V
Sbjct: 1   MSDKVRFELVSPERLLLA-RDVDMVVVPGSEGHFGVLPGHAPLIATMRPGVIEVYEGQTV 59

Query: 77  SQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEA 136
             ++FV+ G + V + S + ++AE+A  +  ++   A      A+ +LS A  E  +  A
Sbjct: 60  VDRLFVAGGMVEVTEASCI-VLAEDALNLKDVNRGDAEARAKAAREDLSLARDEAERLSA 118

Query: 137 QIAVEVAEAL 146
           +  +  AEAL
Sbjct: 119 ERKIAEAEAL 128


>gi|154342069|ref|XP_001566986.1| putative ATP synthase, epsilon chain [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134064311|emb|CAM40512.1| putative ATP synthase, epsilon chain [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 181

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 65/128 (50%)

Query: 19  DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQ 78
           D +  T+   ++  +    VK V V   +G  G+ P+H   +  L P  +TV  T+G  +
Sbjct: 47  DTLRLTITRQDEFLFKEAPVKCVTVMGVNGENGVYPSHAYKITQLAPAPLTVEMTDGTVE 106

Query: 79  KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 138
           K F S G   +N++ S  I   E  P+  LD  AA   L++ QS LSSA  E AKA  +I
Sbjct: 107 KFFTSGGFAHINNEGSCDINCVECIPLSELDVDAAEKALAQQQSALSSAYDEKAKAVVEI 166

Query: 139 AVEVAEAL 146
            + V E++
Sbjct: 167 RISVLESV 174



 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 125 SSASSETAKAEAQIAVEVAEAL--KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAAR 182
           S A   T  A A + VE+ +    K F S G   +N++ S  I   E  P+  LD  AA 
Sbjct: 83  SHAYKITQLAPAPLTVEMTDGTVEKFFTSGGFAHINNEGSCDINCVECIPLSELDVDAAE 142

Query: 183 DVLSKAQSELSSASSETAKAEAQIAVEVAEALV 215
             L++ QS LSSA  E AKA  +I + V E+++
Sbjct: 143 KALAQQQSALSSAYDEKAKAVVEIRISVLESVL 175


>gi|405351550|ref|ZP_11022968.1| ATP synthase epsilon chain [Chondromyces apiculatus DSM 436]
 gi|397092851|gb|EJJ23583.1| ATP synthase epsilon chain [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 136

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 2/110 (1%)

Query: 43  VPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEA 102
           VP   G FG+ P H P L++++PG +T+ E  G  +  FV+ G + V +D  V ++A+ A
Sbjct: 25  VPGGRGLFGVRPGHTPFLSLMEPGALTLIEG-GRRESYFVAGGFVEVGND-KVLVLADAA 82

Query: 103 HPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEALKIFVSS 152
            PV  +D   AR  +++AQ  +   S+E A+ E + A    EA +I  +S
Sbjct: 83  EPVAGIDVEGARRRMTEAQERMKGMSAEDARFELEQATVRREAARIGAAS 132


>gi|58262728|ref|XP_568774.1| ATP synthase delta chain, mitochondrial precursor [Cryptococcus
           neoformans var. neoformans JEC21]
 gi|57223424|gb|AAW41467.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Cryptococcus neoformans var. neoformans JEC21]
          Length = 104

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/99 (41%), Positives = 61/99 (61%), Gaps = 1/99 (1%)

Query: 50  FGILPNHVPTLAILKPGVITVYETEGV-SQKIFVSSGTITVNDDSSVQIIAEEAHPVDSL 108
            GIL NHVP++  L+PGVI V E  G   +K FVS+G  TV+ ++++ I A EA+ +D  
Sbjct: 1   MGILANHVPSVEALRPGVIEVIEENGQQGKKWFVSAGFATVHGNNALTINAVEAYSLDKF 60

Query: 109 DASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
              + +  L+ A   L S + E+ KAEA+I V+V E L+
Sbjct: 61  SPESIKSALADANRVLGSNAPESEKAEARIEVDVYEGLQ 99



 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 44/73 (60%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVS+G  TV+ ++++ I A EA+ +D     + +  L+ A   L S + E+ KAEA+I
Sbjct: 31  KWFVSAGFATVHGNNALTINAVEAYSLDKFSPESIKSALADANRVLGSNAPESEKAEARI 90

Query: 207 AVEVAEALVAAAS 219
            V+V E L AA S
Sbjct: 91  EVDVYEGLQAALS 103


>gi|209965525|ref|YP_002298440.1| ATP synthase F1 subunit epsilon [Rhodospirillum centenum SW]
 gi|226740279|sp|B6IPC5.1|ATPE_RHOCS RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|209958991|gb|ACI99627.1| ATP synthase F1, epsilon subunit [Rhodospirillum centenum SW]
          Length = 146

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 68/122 (55%), Gaps = 7/122 (5%)

Query: 17  YADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVY--ETE 74
            AD+++F L S  K+   +Q V  V VP   G FG+LP H P +  ++PG+I VY     
Sbjct: 1   MADKLEFELVSPEKLL-VSQPVAMVVVPGADGLFGVLPGHAPMIVTVRPGIIDVYGDNQT 59

Query: 75  GVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSL---DASAARDVLSKAQSELSSASSET 131
            VS++IFV+ G   V  D+   ++AEEA  +D+L   D +A    +S  + ++  A+S+ 
Sbjct: 60  TVSRRIFVAGGFAEVT-DTRCTVLAEEASDLDALLKSDTAALEKQISDLREDIEDATSDV 118

Query: 132 AK 133
            +
Sbjct: 119 ER 120


>gi|90418834|ref|ZP_01226745.1| ATP synthase, epsilon subunit [Aurantimonas manganoxydans SI85-9A1]
 gi|90336914|gb|EAS50619.1| ATP synthase, epsilon subunit [Aurantimonas manganoxydans SI85-9A1]
          Length = 134

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 66/120 (55%), Gaps = 2/120 (1%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           AD   F L S  ++  + + V  V+VP   G F ++ +H P +  LKPGV+      G  
Sbjct: 2   ADSFQFELVSPEQLLLS-EAVTAVNVPGAEGYFTVMAHHAPVMTTLKPGVVVATLEGGAQ 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           Q+IFV  G   VN++    ++AE A PVD LD++     +  A+ +++ A++  AKA+AQ
Sbjct: 61  QRIFVLGGFADVNEN-GFTLLAERATPVDQLDSAELDSQIRDAEEDVTDAATPEAKAKAQ 119



 Score = 37.0 bits (84), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 205
           +IFV  G   VN++    ++AE A PVD LD++     +  A+ +++ A++  AKA+AQ
Sbjct: 62  RIFVLGGFADVNENG-FTLLAERATPVDQLDSAELDSQIRDAEEDVTDAATPEAKAKAQ 119


>gi|374292978|ref|YP_005040013.1| ATP synthase, F1 sector subunit epsilon epsilon [Azospirillum
           lipoferum 4B]
 gi|357424917|emb|CBS87797.1| ATP synthase, F1 sector, epsilon subunit epsilon [Azospirillum
           lipoferum 4B]
          Length = 138

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 2/129 (1%)

Query: 17  YADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGV 76
            AD+++F L S  K+   +Q V  V VP   G FG+L  H P ++ ++PGVI VYE + V
Sbjct: 1   MADKVEFELVSPEKLL-KSQPVDMVVVPGSEGDFGVLAGHSPMISTVRPGVIDVYEGDRV 59

Query: 77  SQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEA 136
             ++FV+ G   V  ++   ++AEEA  +  LD +A    +     +L  + S+  +A A
Sbjct: 60  VDRVFVAGGFAEVT-EARCTVLAEEAVALTDLDRAAVEKQIKDLSEDLDDSKSDAERAVA 118

Query: 137 QIAVEVAEA 145
           +  + VA A
Sbjct: 119 ETKLAVARA 127


>gi|288959332|ref|YP_003449673.1| F-type H+-transporting ATPase subunit epsilon [Azospirillum sp.
           B510]
 gi|288911640|dbj|BAI73129.1| F-type H+-transporting ATPase epsilon chain [Azospirillum sp. B510]
          Length = 138

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 71/126 (56%), Gaps = 4/126 (3%)

Query: 17  YADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGV 76
            AD+++F L S  K+   +Q V  V VP   G FG+L  H P ++ ++PGVI VYE + V
Sbjct: 1   MADKVEFELVSPEKLL-KSQPVDMVVVPGSEGDFGVLAGHSPMISTVRPGVIDVYEGDRV 59

Query: 77  SQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSEL--SSASSETAKA 134
             ++FV+ G   V  ++   ++AEEA  +  LD +A    +     +L  S + +E A A
Sbjct: 60  VDRVFVAGGFAEVT-EARCTVLAEEAVALTDLDRAAVEKQVKDLSEDLDDSKSDAERAAA 118

Query: 135 EAQIAV 140
           E+++AV
Sbjct: 119 ESKLAV 124


>gi|84995484|ref|XP_952464.1| ATP synthase delta chain, mitochondrial [Theileria annulata]
 gi|65302625|emb|CAI74732.1| ATP synthase delta chain, mitochondrial [Theileria annulata]
          Length = 154

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 5/146 (3%)

Query: 6   VTSATRLARRGYADQ-MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILK 64
           +T   R A   Y+++ + F+L S ++  Y    VK + VP + G F + P H P L+ LK
Sbjct: 4   ITRFLRFASNTYSNKDLVFSLLSSHESLYNKVPVKNLTVPGYDGYFTVTPGHSPMLSTLK 63

Query: 65  PGVITV-YETEGVSQKIFVSSGTITV---NDDSSVQIIAEEAHPVDSLDASAARDVLSKA 120
           PGV++   +      K F+SSG       +D  +  ++  E  P+D LD   A  VL + 
Sbjct: 64  PGVVSFSLKDSNEVHKFFISSGFFVYRQSDDSHTADVMGVEIVPLDQLDKERATSVLQEV 123

Query: 121 QSELSSASSETAKAEAQIAVEVAEAL 146
            SE    SS+ AK +  +  ++  ++
Sbjct: 124 LSETQGDSSQWAKVKTFLTQDLCSSV 149


>gi|154246025|ref|YP_001416983.1| F0F1 ATP synthase subunit epsilon [Xanthobacter autotrophicus Py2]
 gi|154160110|gb|ABS67326.1| ATP synthase F1, epsilon subunit [Xanthobacter autotrophicus Py2]
          Length = 139

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 68/116 (58%), Gaps = 3/116 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           + F L S  ++ ++   V +V VP   G FG++  H P + +LKPG++T+ + +G S+  
Sbjct: 4   LPFELVSPERLVFSG-AVTEVIVPGAEGEFGVMAGHAPFIGMLKPGILTI-KGDGASRSY 61

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEA 136
           FV  G   VN  + + I+AEEA P+D LD  A +  +  A+ +++ A+++ ++  A
Sbjct: 62  FVRGGFAEVN-PAGLTILAEEAKPLDELDLGALQQQIQDAKEDVADATTDESRQRA 116


>gi|225562942|gb|EEH11221.1| ATP synthase subunit delta [Ajellomyces capsulatus G186AR]
          Length = 102

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 59/98 (60%)

Query: 50  FGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLD 109
            G+L NHVP++  L PG++ + E  G +++ F+S G   V  DS + I A EA+P++   
Sbjct: 1   MGVLANHVPSIEQLNPGLVEIIEESGGTKQFFLSGGFAVVQPDSQLSINAVEAYPLEDFS 60

Query: 110 ASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
           A A +  +++AQ   S   SE   AEA+I +EV E+L+
Sbjct: 61  AEAVKAQIAEAQKVASGGGSEQDIAEAKIELEVLESLQ 98



 Score = 44.7 bits (104), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 41/71 (57%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           + F+S G   V  DS + I A EA+P++   A A +  +++AQ   S   SE   AEA+I
Sbjct: 30  QFFLSGGFAVVQPDSQLSINAVEAYPLEDFSAEAVKAQIAEAQKVASGGGSEQDIAEAKI 89

Query: 207 AVEVAEALVAA 217
            +EV E+L AA
Sbjct: 90  ELEVLESLQAA 100


>gi|302511427|ref|XP_003017665.1| hypothetical protein ARB_04547 [Arthroderma benhamiae CBS 112371]
 gi|291181236|gb|EFE37020.1| hypothetical protein ARB_04547 [Arthroderma benhamiae CBS 112371]
          Length = 216

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 61/103 (59%)

Query: 40  QVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIA 99
           QV++ + SG  GIL +HVP++  LKPG+I + E  G ++K F++ G   +  DS++ I A
Sbjct: 72  QVNIAAESGDMGILSSHVPSIEQLKPGLIEIIEEGGQTKKFFLAGGFAVMQPDSNLNINA 131

Query: 100 EEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEV 142
            E   +D+    A +  L++AQ   S   SE   AEA+I VEV
Sbjct: 132 VEGFALDAFSVDAVKSQLAEAQRLASGTGSEKEIAEAKIQVEV 174



 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 38/74 (51%)

Query: 137 QIAVEVAEALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS 196
           +I  E  +  K F++ G   +  DS++ I A E   +D+    A +  L++AQ   S   
Sbjct: 101 EIIEEGGQTKKFFLAGGFAVMQPDSNLNINAVEGFALDAFSVDAVKSQLAEAQRLASGTG 160

Query: 197 SETAKAEAQIAVEV 210
           SE   AEA+I VEV
Sbjct: 161 SEKEIAEAKIQVEV 174


>gi|115379931|ref|ZP_01466988.1| ATP synthase F1, epsilon subunit [Stigmatella aurantiaca DW4/3-1]
 gi|310818218|ref|YP_003950576.1| ATP synthase f1 subunit epsilon [Stigmatella aurantiaca DW4/3-1]
 gi|115363056|gb|EAU62234.1| ATP synthase F1, epsilon subunit [Stigmatella aurantiaca DW4/3-1]
 gi|309391290|gb|ADO68749.1| ATP synthase F1, epsilon subunit [Stigmatella aurantiaca DW4/3-1]
          Length = 134

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 54/91 (59%), Gaps = 2/91 (2%)

Query: 43  VPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEA 102
           VP   G FG+ P H P L++++PG +T+ +  G  +  F++ G + V +D  V ++A+ A
Sbjct: 25  VPGSRGLFGVRPGHAPFLSLVEPGALTLIDA-GRRESFFIAGGFVEVGNDK-VLVLADGA 82

Query: 103 HPVDSLDASAARDVLSKAQSELSSASSETAK 133
            PV  +D  AAR  L++AQ  L   SSE A+
Sbjct: 83  EPVGGIDVEAARKRLAEAQERLKGLSSEDAR 113



 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%)

Query: 148 IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAK 201
            F++ G + V +D  V ++A+ A PV  +D  AAR  L++AQ  L   SSE A+
Sbjct: 61  FFIAGGFVEVGNDK-VLVLADGAEPVGGIDVEAARKRLAEAQERLKGLSSEDAR 113


>gi|449666409|ref|XP_002161905.2| PREDICTED: ATP synthase subunit delta, mitochondrial-like [Hydra
           magnipapillata]
          Length = 78

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/68 (55%), Positives = 49/68 (72%)

Query: 150 VSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVE 209
           VSSGTITVN DS+ QI+AEEA P+D  D ++ R     A+S LS A++ET KAEAQI V+
Sbjct: 7   VSSGTITVNKDSTAQILAEEASPLDRFDLNSVRKAAEDARSALSVANTETLKAEAQIQVD 66

Query: 210 VAEALVAA 217
             +AL+ A
Sbjct: 67  TYDALLFA 74



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 50/72 (69%), Gaps = 1/72 (1%)

Query: 82  VSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVE 141
           VSSGTITVN DS+ QI+AEEA P+D  D ++ R     A+S LS A++ET KAEAQI V+
Sbjct: 7   VSSGTITVNKDSTAQILAEEASPLDRFDLNSVRKAAEDARSALSVANTETLKAEAQIQVD 66

Query: 142 VAEALKIFVSSG 153
             +AL +F   G
Sbjct: 67  TYDAL-LFALDG 77


>gi|71030354|ref|XP_764819.1| ATP synthase F1 subunit delta [Theileria parva strain Muguga]
 gi|68351775|gb|EAN32536.1| ATP synthase F1, delta subunit, putative [Theileria parva]
          Length = 164

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 5/143 (3%)

Query: 6   VTSATRLARRGYADQ-MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILK 64
           +T   R A   Y+++ + F+L S ++  Y    VK + VP + G F + P H P L+ LK
Sbjct: 4   ITRFLRFASNTYSNKDLVFSLLSSHEALYNKVPVKSLTVPGYDGYFTVTPGHSPMLSTLK 63

Query: 65  PGVITV-YETEGVSQKIFVSSGTITVN---DDSSVQIIAEEAHPVDSLDASAARDVLSKA 120
           PGV++   +      K F+SSG        +  + +++  E  P+D LD   A  VL + 
Sbjct: 64  PGVVSFSLKDSNEVHKFFISSGFFVYRQSEESHTAEVMGVEVVPLDQLDKERATSVLQEV 123

Query: 121 QSELSSASSETAKAEAQIAVEVA 143
            +E    SS+ AK +  + + ++
Sbjct: 124 LTETQGDSSQWAKVKTFLTLVIS 146


>gi|213407018|ref|XP_002174280.1| ATP synthase delta chain [Schizosaccharomyces japonicus yFS275]
 gi|212002327|gb|EEB07987.1| ATP synthase delta chain [Schizosaccharomyces japonicus yFS275]
          Length = 179

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 2/130 (1%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           AD +  + A  +   Y    V QVD+P+  G  GIL NHVP +  L+PGVI + +  G +
Sbjct: 45  ADGLLLSFALPSSTLYERTPVTQVDIPTEHGDMGILKNHVPIIECLRPGVIKITDVNGAT 104

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSL-DASAARDVLSKAQSELSSASSETAKAEA 136
            K+F + G      ++ + I + EA  +D     S    +L +A+++ ++A SET K   
Sbjct: 105 DKLFSAGGFAVQQPNNHLCITSPEAFRLDDFASVSEVTSLLDQAKTQQATA-SETEKPAV 163

Query: 137 QIAVEVAEAL 146
            + + V EA+
Sbjct: 164 DVRISVLEAI 173


>gi|452965344|gb|EME70368.1| ATP synthase epsilon chain [Magnetospirillum sp. SO-1]
          Length = 133

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 65/120 (54%), Gaps = 2/120 (1%)

Query: 17  YADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGV 76
            AD++ F L S  K+  +++ V  V VP   G FG +  H P +  ++PGVI +++   V
Sbjct: 1   MADKIQFELVSPAKLLVSSK-VDMVVVPGSEGDFGAMALHAPMITTVRPGVIDIHDGGKV 59

Query: 77  SQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEA 136
           S  IFV+ G   VN++  + ++AEEA PV+ L A  A      A+  L  A +E  KA A
Sbjct: 60  SSSIFVAGGFAEVNEE-RITVLAEEAIPVNELTAEMAEARKKTAKEALDDAGNERDKAHA 118


>gi|342181705|emb|CCC91185.1| putative ATP synthase, epsilon chain [Trypanosoma congolense
           IL3000]
          Length = 182

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 63/126 (50%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           +  TL   ++     + VK + V   +G +GI P H   +  L P  +TV   +G  +K 
Sbjct: 50  LRLTLTRQDEFLMREEAVKCITVTGANGDYGIYPGHAYKIVQLTPAPLTVEYADGTIKKF 109

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           FVS G   +N++ S  +   E  P+D LD + A   LS  Q+ L SA  + AK+  +I V
Sbjct: 110 FVSGGFAHINNEGSCDVNTVECIPLDDLDPAMAERELSAQQAALGSAKDDKAKSVVEIRV 169

Query: 141 EVAEAL 146
            V EA+
Sbjct: 170 TVLEAV 175



 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 2/84 (2%)

Query: 136 AQIAVEVAEAL--KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELS 193
           A + VE A+    K FVS G   +N++ S  +   E  P+D LD + A   LS  Q+ L 
Sbjct: 95  APLTVEYADGTIKKFFVSGGFAHINNEGSCDVNTVECIPLDDLDPAMAERELSAQQAALG 154

Query: 194 SASSETAKAEAQIAVEVAEALVAA 217
           SA  + AK+  +I V V EA++AA
Sbjct: 155 SAKDDKAKSVVEIRVTVLEAVIAA 178


>gi|427427169|ref|ZP_18917214.1| ATP synthase epsilon chain [Caenispirillum salinarum AK4]
 gi|425883870|gb|EKV32545.1| ATP synthase epsilon chain [Caenispirillum salinarum AK4]
          Length = 133

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 2/131 (1%)

Query: 17  YADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGV 76
            A+ ++F L S  K+  + + V+ V VP   G FG +P H P L+ ++PGV+ +Y+   V
Sbjct: 1   MAETLEFELVSPEKLLVS-EPVEMVIVPGSEGNFGAMPRHAPMLSTVRPGVLDIYKDGKV 59

Query: 77  SQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEA 136
           + +IFV+ G   V ++    ++AEEA  +  L        L  A+     A ++  KA+A
Sbjct: 60  ANQIFVAGGFAEVTEERCT-VLAEEAVVLSDLTRDDVEKRLQAARDAEQEADTDVEKAQA 118

Query: 137 QIAVEVAEALK 147
              V VAEA++
Sbjct: 119 AKNVAVAEAMR 129


>gi|144898924|emb|CAM75788.1| ATP synthase F1, epsilon subunit [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 133

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 71/131 (54%), Gaps = 2/131 (1%)

Query: 17  YADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGV 76
            A+++ F L S  K+  + ++V  V VP   G FG L  H P +  ++PGVI V+    +
Sbjct: 1   MAEKIKFELVSPAKLLIS-ESVDMVVVPGSEGDFGALALHAPMITTVRPGVINVHNDGKI 59

Query: 77  SQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEA 136
             +IFV+ G   VN++  V ++AEEA PV  + A  A   L  A+  ++ A ++  KA A
Sbjct: 60  GNRIFVAGGFAEVNEE-RVTVLAEEAIPVADITADMASARLQDAREAIADAKTDAEKAAA 118

Query: 137 QIAVEVAEALK 147
              + +A AL+
Sbjct: 119 DQRMLIATALQ 129


>gi|23015480|ref|ZP_00055255.1| COG0355: F0F1-type ATP synthase, epsilon subunit (mitochondrial
           delta subunit) [Magnetospirillum magnetotacticum MS-1]
          Length = 133

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 9/120 (7%)

Query: 17  YADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGV 76
            A+++ F L S  K+  +++ V  V VP   G FG L  H P +  ++PGVI +++   V
Sbjct: 1   MAEKIQFELVSPAKLLVSSK-VDMVVVPGSEGDFGALALHAPMITTVRPGVIDIHDGGKV 59

Query: 77  SQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDA-------SAARDVLSKAQSELSSASS 129
           S  IFV+ G   VN++  + ++AEEA PV  L A        AA+D L  A+SE   AS+
Sbjct: 60  SSSIFVAGGFAEVNEE-RITVLAEEAIPVAELTAELAEARKKAAKDALDDAKSEREKASA 118


>gi|72390643|ref|XP_845616.1| ATP synthase, epsilon chain [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
 gi|62359855|gb|AAX80283.1| ATP synthase, epsilon chain, putative [Trypanosoma brucei]
 gi|70802151|gb|AAZ12057.1| ATP synthase, epsilon chain, putative [Trypanosoma brucei brucei
           strain 927/4 GUTat10.1]
 gi|261329023|emb|CBH12001.1| ATP synthase, epsilon chain, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 182

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 64/126 (50%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           +  TL   ++     + VK V V   +G +GI P H   +  L P  +TV  T+G ++K 
Sbjct: 50  LRLTLTRQDEFLLREEPVKCVTVTGTNGEYGIYPGHAYKIVQLNPSPLTVEYTDGTTKKY 109

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           FVS G   +N++ S  +   E   +D LD + A   L+  Q+ L SA  + AK+  +I +
Sbjct: 110 FVSGGFAHINNEGSCDVNTVECTLLDDLDLAIAEKELAAQQAALGSAKDDKAKSVVEIRI 169

Query: 141 EVAEAL 146
            V EA+
Sbjct: 170 SVIEAV 175


>gi|444509789|gb|ELV09421.1| ATP synthase subunit delta, mitochondrial [Tupaia chinensis]
          Length = 187

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 27/54 (50%), Positives = 38/54 (70%)

Query: 17 YADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITV 70
          +  QM FT A+  +VF+   N +QVDVP+ +G FGIL +HVPTL +L PG++ V
Sbjct: 34 WLAQMSFTFATRMQVFFNGTNGRQVDVPTLTGPFGILASHVPTLQVLWPGLVMV 87


>gi|323349498|gb|EGA83722.1| Atp16p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323355785|gb|EGA87599.1| Atp16p [Saccharomyces cerevisiae VL3]
          Length = 130

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           ++ F L   ++  Y+   V QV++P+ SG  G+L NHVPT+  L PGV+ V E    S+K
Sbjct: 33  KLQFALP--HETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGSN-SKK 89

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKA 120
            F+S G  TV  DS + + A EA P++S      +  + ++
Sbjct: 90  FFISGGFATVQPDSQLCVTAIEAFPLESFSQENIKKFVGRS 130


>gi|452751141|ref|ZP_21950887.1| ATP synthase epsilon chain [alpha proteobacterium JLT2015]
 gi|451961291|gb|EMD83701.1| ATP synthase epsilon chain [alpha proteobacterium JLT2015]
          Length = 133

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 65/118 (55%), Gaps = 3/118 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYE-TEGVSQK 79
           + F L S  K   +   V QV VP   G F +L  H P ++ ++ G I VYE   G +++
Sbjct: 3   LQFELVSPEKQLRSG-TVHQVVVPGAEGDFAVLEGHAPMMSTIRAGAIEVYEAAGGPAER 61

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           IF+  G   VN ++ + I+AE A PV ++DA      + +A+  L+ A +++ +A+A+
Sbjct: 62  IFIEGGFAEVN-ETGLTILAERAEPVANIDAEQLTAEIERAEQRLARADNDSERAQAE 118



 Score = 36.6 bits (83), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 6/72 (8%)

Query: 139 AVEVAEAL-----KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELS 193
           A+EV EA      +IF+  G   VN+ + + I+AE A PV ++DA      + +A+  L+
Sbjct: 48  AIEVYEAAGGPAERIFIEGGFAEVNE-TGLTILAERAEPVANIDAEQLTAEIERAEQRLA 106

Query: 194 SASSETAKAEAQ 205
            A +++ +A+A+
Sbjct: 107 RADNDSERAQAE 118


>gi|323334252|gb|EGA75634.1| Atp16p [Saccharomyces cerevisiae AWRI796]
          Length = 149

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 1/96 (1%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           +    A  ++  Y+   V QV++P+ SG  G+L NHVPT+  L PGV+ V E    S+K 
Sbjct: 32  LKLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGSN-SKKF 90

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDV 116
           F+S G  TV  DS + + A EA P++S      + +
Sbjct: 91  FISGGFATVQPDSQLCVTAIEAFPLESFSQENIKKI 126


>gi|323309489|gb|EGA62700.1| Atp16p [Saccharomyces cerevisiae FostersO]
          Length = 130

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           ++ F L   ++  Y+   V QV++P+ SG  G+L NHVPT+  L PGV+ V E    S+K
Sbjct: 33  KLQFALP--HETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGTN-SKK 89

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKA 120
            F+S G  TV  DS + + A EA P++S      +  + ++
Sbjct: 90  FFISGGFATVQPDSQLCVTAIEAFPLESFSQENIKKFVGRS 130


>gi|163792321|ref|ZP_02186298.1| H+-transporting two-sector ATPase, delta/epsilon subunit [alpha
           proteobacterium BAL199]
 gi|159182026|gb|EDP66535.1| H+-transporting two-sector ATPase, delta/epsilon subunit [alpha
           proteobacterium BAL199]
          Length = 137

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 2/129 (1%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           A+   F L S  ++  + ++V+ V VP   G FG+LP H P ++ L  GVI +YE   V 
Sbjct: 2   AETTKFELVSPERLVLS-RDVEMVVVPGTEGYFGVLPRHAPMISTLSAGVIDIYEGGAVV 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
            +IFV+ G   V  ++   ++AEEA P+  +D +A    ++  +  L   +   A+ + +
Sbjct: 61  DRIFVAGGFAEVT-ETRCTVLAEEAMPLGDVDVAATEKSIADDRDVLKDTTDAVARGKLE 119

Query: 138 IAVEVAEAL 146
             +   EA+
Sbjct: 120 DRIRNREAM 128


>gi|381167517|ref|ZP_09876724.1| ATP synthase epsilon chain [Phaeospirillum molischianum DSM 120]
 gi|380683271|emb|CCG41536.1| ATP synthase epsilon chain [Phaeospirillum molischianum DSM 120]
          Length = 133

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 74/132 (56%), Gaps = 2/132 (1%)

Query: 17  YADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGV 76
            A+++ F L S  K+  + + V+ V VP   G FG LP H P ++ ++PGVI ++    V
Sbjct: 1   MAEKIQFELVSPAKLLLS-EPVEMVVVPGEDGDFGALPLHAPLISTVRPGVIDIHNNGKV 59

Query: 77  SQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEA 136
           + +IF++ G   V  +  V ++AEEA P++ L +  A +  + A   +S A ++  ++ A
Sbjct: 60  TNRIFIAGGFAEVTGE-RVTVLAEEAFPLEELTSEMAAERRAAADLAVSDAQTDLDRSRA 118

Query: 137 QIAVEVAEALKI 148
              V +AEA+ I
Sbjct: 119 ARQVAIAEAMVI 130


>gi|347734820|ref|ZP_08867807.1| ATP synthase F1, epsilon subunit [Azospirillum amazonense Y2]
 gi|346922105|gb|EGY02599.1| ATP synthase F1, epsilon subunit [Azospirillum amazonense Y2]
          Length = 141

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 72/131 (54%), Gaps = 6/131 (4%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEG-- 75
           AD+++F L S  K+   +Q V  V VP   G  G LP H P +  LKPGVI +Y  +G  
Sbjct: 2   ADKVEFELVSPEKLL-VSQPVDMVVVPGTEGYLGALPGHAPLITTLKPGVIDIY-LDGIT 59

Query: 76  -VSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKA 134
            +S +IFV+ G   V  ++   ++AEEA  V +LD +A    +     +++ A+++  K 
Sbjct: 60  TISNRIFVAGGFAEVT-ETRCTVLAEEAVEVAALDRAAVEQQVKDLAEDVADAANDVDKR 118

Query: 135 EAQIAVEVAEA 145
            A+  + VA+A
Sbjct: 119 AAEAKLLVAQA 129


>gi|83592563|ref|YP_426315.1| H+-transporting two-sector ATPase subunit delta/epsilon
           [Rhodospirillum rubrum ATCC 11170]
 gi|386349289|ref|YP_006047537.1| H+-transporting two-sector ATPase subunit delta/epsilon
           [Rhodospirillum rubrum F11]
 gi|114605|sp|P05442.1|ATPE_RHORU RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|119367773|sp|Q2RV17.1|ATPE_RHORT RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|9367331|emb|CAB97256.1| unnamed protein product [Rhodospirillum rubrum]
 gi|83575477|gb|ABC22028.1| H+-transporting two-sector ATPase, delta/epsilon subunit
           [Rhodospirillum rubrum ATCC 11170]
 gi|346717725|gb|AEO47740.1| H+-transporting two-sector ATPase subunit delta/epsilon
           [Rhodospirillum rubrum F11]
          Length = 134

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 2/107 (1%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           A+  +F L S  ++ ++ + V+ V VP   G FG +P H P L+ ++PGVI+ Y    V 
Sbjct: 2   AETTEFELVSPERLLFS-EPVEMVVVPGTDGDFGAMPRHAPLLSTVRPGVISTYNGGKVQ 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSEL 124
           ++IFV+ G   V +D    ++A+EA  + SL   A R  L  A   L
Sbjct: 61  RRIFVAGGFAEVTEDRCT-VLADEAFDLASLSEEAVRARLQAADDRL 106


>gi|158425748|ref|YP_001527040.1| F0F1 ATP synthase subunit epsilon [Azorhizobium caulinodans ORS
           571]
 gi|158332637|dbj|BAF90122.1| H+-transporting two-sector ATPase delta/epsilon subunit
           [Azorhizobium caulinodans ORS 571]
          Length = 138

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 67/114 (58%), Gaps = 3/114 (2%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F L S  ++ ++ Q V +V VP   G FG++  H P ++ L  G++T+ + EG  +++FV
Sbjct: 6   FELVSPERLVFSGQ-VTEVVVPGSEGQFGVMAGHAPFISTLSAGILTI-KGEGADKRLFV 63

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEA 136
             G    N  + + ++AE+A PV+S D +  + ++  AQ +++ A S+ A+ +A
Sbjct: 64  RGGFAEANP-AGLTVLAEQATPVESFDRAELQQLIKNAQEDVADAKSDEARQKA 116


>gi|348667962|gb|EGZ07787.1| hypothetical protein PHYSODRAFT_288955 [Phytophthora sojae]
          Length = 169

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 73/149 (48%), Gaps = 8/149 (5%)

Query: 1   MAARLVTSATRLARRGYAD------QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILP 54
            AAR + +++RL+            ++   L +  + FY N  V  V +P   G +G+  
Sbjct: 8   FAARALHTSSRLSAAAADQAAATATKVTLNLTTPYQAFYKNAEVDLVQIPGVIGEYGVTA 67

Query: 55  NHVPTLAILKPGVITVY-ETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAA 113
            H P LA LKPGVI V+ E E   Q  F + G    + +S   I   E   V+ +D  AA
Sbjct: 68  GHTPVLAQLKPGVIKVHVEREKDVQSFFTAGGFALTHANSVTDIACVELVKVEDIDPEAA 127

Query: 114 RDVLSKAQSELSSASSET-AKAEAQIAVE 141
           +  L+K Q++L+SA   +  K  AQI V+
Sbjct: 128 QAGLTKYQAQLASAPEGSEEKLNAQIGVD 156


>gi|298710990|emb|CBJ32297.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 169

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 72/129 (55%), Gaps = 4/129 (3%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVI-TVYETEGVSQ 78
           +++F L   ++  Y +++V QV +P  +G +G+   H P +A LKPGV+  V+E     +
Sbjct: 33  KLNFCLP--HETIYKDKDVDQVIIPGSAGEYGVTAGHSPIVAELKPGVVQVVHEAGQEPE 90

Query: 79  KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAK-AEAQ 137
             FVS+G    +  S   I A EA  V+ +D  A +     A+ E+ +A+  + + AEAQ
Sbjct: 91  NFFVSAGFALTHPTSVTDITAIEAVRVEEIDEGAVKSSYDAAKREMDAATEGSREAAEAQ 150

Query: 138 IAVEVAEAL 146
           +AVE  +A+
Sbjct: 151 VAVETTKAM 159


>gi|442324455|ref|YP_007364476.1| F0F1 ATP synthase subunit epsilon [Myxococcus stipitatus DSM 14675]
 gi|441492097|gb|AGC48792.1| F0F1 ATP synthase subunit epsilon [Myxococcus stipitatus DSM 14675]
          Length = 135

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 2/97 (2%)

Query: 43  VPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEA 102
           VP   G FG+ P H P L++++PG +T+ E  G     FV+ G + V +D  V ++A+ A
Sbjct: 25  VPGGKGLFGVRPGHTPFLSLMEPGALTLVEA-GKRDAYFVAGGFVEVAND-KVLVLADAA 82

Query: 103 HPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 139
             V  +D   AR  +++AQ  L   SSE A+ E + A
Sbjct: 83  EHVSGIDVDGARKRMAEAQERLKGLSSEDARYELEQA 119


>gi|89628441|gb|ABD77506.1| putative mitochondrial ATP synthase [Theileria lestoquardi]
          Length = 148

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 5/143 (3%)

Query: 6   VTSATRLARRGYADQ-MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILK 64
           +T   R A   Y+++ + F+L S ++  +    VK + VP + G F + P H P L+ LK
Sbjct: 4   ITRFLRFASNTYSNKDLVFSLLSSHESLFNKVPVKNLTVPGYDGYFTVTPGHSPMLSTLK 63

Query: 65  PGVITV-YETEGVSQKIFVSSGTITV---NDDSSVQIIAEEAHPVDSLDASAARDVLSKA 120
           PGV++   +      K F+SSG       +D  +  ++  E  P+D LD   A  VL + 
Sbjct: 64  PGVVSFSLKDSNEVHKYFISSGFFVYRQSDDSHTADVMGVEIVPLDQLDKERATSVLQEV 123

Query: 121 QSELSSASSETAKAEAQIAVEVA 143
            +E    S + AK +  +  ++ 
Sbjct: 124 LAETQGDSGQWAKVKTFLTQDLC 146


>gi|301109876|ref|XP_002904018.1| ATP synthase subunit delta', putative [Phytophthora infestans
           T30-4]
 gi|262096144|gb|EEY54196.1| ATP synthase subunit delta', putative [Phytophthora infestans
           T30-4]
          Length = 169

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 77/160 (48%), Gaps = 8/160 (5%)

Query: 1   MAARLVTSATRLARRGYAD------QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILP 54
            AAR + +++RL+            ++   L +  + FY    V  V +P   G +G+  
Sbjct: 8   FAARALHTSSRLSAAATDQAAATATKVTLNLTTPYQAFYKGAEVDLVQIPGVIGEYGVTA 67

Query: 55  NHVPTLAILKPGVITVY-ETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAA 113
            H P LA LKPGVI V+ E E   Q  F + G    + +S   I   E   V+ +D  AA
Sbjct: 68  GHTPVLAQLKPGVIQVHVEREKDVQSFFTAGGFALTHANSVTDIACVELVKVEDIDPEAA 127

Query: 114 RDVLSKAQSELSSASSET-AKAEAQIAVEVAEALKIFVSS 152
           +  L+K QS+L+SA   +  K  AQI V+   A+   V+S
Sbjct: 128 QAGLTKYQSQLASAPEGSEEKLNAQIGVDTHAAMVAAVTS 167


>gi|83313237|ref|YP_423501.1| ATP synthase epsilon chain [Magnetospirillum magneticum AMB-1]
 gi|119367743|sp|Q2VZN3.1|ATPE_MAGMM RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|82948078|dbj|BAE52942.1| ATP synthase epsilon chain [Magnetospirillum magneticum AMB-1]
          Length = 133

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 64/120 (53%), Gaps = 2/120 (1%)

Query: 17  YADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGV 76
            A+++ F L S  K+  +++ V  V VP   G FG L  H P +  ++PGVI +++   V
Sbjct: 1   MAEKIQFELVSPAKLLVSSK-VDMVVVPGAEGDFGALALHAPMITTVRPGVIDIHDGGKV 59

Query: 77  SQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEA 136
           S  +FV+ G   VN++  + ++AEEA PV  L A  A      A+  L  A S+  KA A
Sbjct: 60  SSSVFVAGGFAEVNEE-RITVLAEEAIPVGELTAEMAEARKKAAKEALDDAKSDRDKAHA 118


>gi|114706548|ref|ZP_01439449.1| ATP synthase subunit epsilon [Fulvimarina pelagi HTCC2506]
 gi|114537940|gb|EAU41063.1| ATP synthase subunit epsilon [Fulvimarina pelagi HTCC2506]
          Length = 134

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           AD   F L S  K+  + ++   V VP   G F ++ NH P +  LKPG++T   + G  
Sbjct: 2   ADSFKFELVSPEKLLLS-EDANSVVVPGNEGEFTVMSNHAPFMTTLKPGMVTAKLSGGEE 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           +K+FV  G   VN++  + ++AE A P D++ AS   + +  A+  +  A  +  + +A+
Sbjct: 61  KKLFVRGGFADVNEN-GLTLLAEHAEPADNMTASQLDEHIEAARKRMDDAEHDDTRFKAE 119


>gi|85713720|ref|ZP_01044710.1| H+-transporting two-sector ATPase, delta/epsilon subunit
           [Nitrobacter sp. Nb-311A]
 gi|85699624|gb|EAQ37491.1| H+-transporting two-sector ATPase, delta/epsilon subunit
           [Nitrobacter sp. Nb-311A]
          Length = 136

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 64/113 (56%), Gaps = 3/113 (2%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F L S  K+ ++ + V QVD+P   G FG+L  H P +A ++PG++TV    G  QKI V
Sbjct: 6   FDLVSPEKLAFSGE-VDQVDIPGVEGDFGVLAGHAPVVATIRPGILTVTAAGGTRQKIIV 64

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSA-SSETAKA 134
             G   V+ +  + ++A+ A  ++ LD +   D+++  +++L+    SE  KA
Sbjct: 65  LGGLAEVS-EKGLTVLADVATSIEELDRAQFTDMIAGMEAQLTEKEGSELDKA 116


>gi|401426041|ref|XP_003877505.1| putative ATP synthase, epsilon chain [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322493750|emb|CBZ29040.1| putative ATP synthase, epsilon chain [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 181

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 62/126 (49%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           +  T+   ++  +    VK V +   +G  G+ P H   +  L P  +TV   +G  +K 
Sbjct: 49  LRLTVTRQDEFLFKEAPVKCVTIVGVNGECGVYPGHAYEITQLTPAPLTVEMPDGTVKKF 108

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           F S G   +N++ S  I   E  P+  LD  AA   L++ QS L+SA  + AKA  +I +
Sbjct: 109 FTSGGFAHINNEGSCDINCVECIPLTELDVDAAEKALAQQQSALTSAHDDKAKAVIEIRI 168

Query: 141 EVAEAL 146
            V E++
Sbjct: 169 GVLESV 174


>gi|115388395|ref|XP_001211703.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114195787|gb|EAU37487.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 107

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 4/77 (5%)

Query: 12 LARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGV 67
          L RRGYA    D++  +LA  ++  + +  V QV++P+ SG  G+L NHVP++  LKPG+
Sbjct: 22 LQRRGYAEAVNDKIKLSLALPHQTIFKSTGVVQVNIPAESGEMGVLANHVPSIEQLKPGL 81

Query: 68 ITVYETEGVSQKIFVSS 84
          + + E  G  QK F +S
Sbjct: 82 VEIVEEGGAIQKFFRTS 98


>gi|302662815|ref|XP_003023058.1| hypothetical protein TRV_02805 [Trichophyton verrucosum HKI 0517]
 gi|291187035|gb|EFE42440.1| hypothetical protein TRV_02805 [Trichophyton verrucosum HKI 0517]
          Length = 193

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 37/168 (22%)

Query: 12  LARRGYA----DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGV 67
           L++R YA    D++  +L    +  Y + +V QV++ + SG  GIL +HVP++  LKPG+
Sbjct: 22  LSQRTYATAVADKLKLSLVLPKETIYKSADVVQVNIAAESGDMGILSSHVPSIEQLKPGL 81

Query: 68  ITVYETEGVSQKIF---------------------------------VSSGTITVNDDSS 94
           I + E  G ++K F                                 V+ G   +  DS+
Sbjct: 82  IEIIEEGGQTKKFFRMLYPFHPTLAQFLQLNIKPAGVLASISSFFILVAGGFAVMQPDSN 141

Query: 95  VQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEV 142
           + I A E   +D+    A +  L++AQ   S   SE   AEA+I VEV
Sbjct: 142 LNINAVEGFSLDAFSVDAVKSQLAEAQRLASGTGSEKEIAEAKIQVEV 189


>gi|418721331|gb|AFX66253.1| mitochondrial ATP synthase subunit delta, partial [Meleagris
           gallopavo]
          Length = 81

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/76 (56%), Positives = 56/76 (73%)

Query: 71  YETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
           Y  +G + K FVSSG++TVN DS+VQ++AEEA  +D LD + A+  L KA SE+++AS E
Sbjct: 1   YGEDGTATKYFVSSGSVTVNADSTVQVLAEEAVTMDMLDLATAKSNLEKAVSEMAAASDE 60

Query: 131 TAKAEAQIAVEVAEAL 146
            AKAEAQI VE  EAL
Sbjct: 61  AAKAEAQIKVEANEAL 76



 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/73 (60%), Positives = 55/73 (75%)

Query: 145 ALKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEA 204
           A K FVSSG++TVN DS+VQ++AEEA  +D LD + A+  L KA SE+++AS E AKAEA
Sbjct: 7   ATKYFVSSGSVTVNADSTVQVLAEEAVTMDMLDLATAKSNLEKAVSEMAAASDEAAKAEA 66

Query: 205 QIAVEVAEALVAA 217
           QI VE  EALV A
Sbjct: 67  QIKVEANEALVKA 79


>gi|157872893|ref|XP_001684970.1| putative ATP synthase, epsilon chain [Leishmania major strain
           Friedlin]
 gi|68128040|emb|CAJ06882.1| putative ATP synthase, epsilon chain [Leishmania major strain
           Friedlin]
          Length = 181

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 62/126 (49%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           +  T+   ++  +    VK V +   +G  G+ P H   +  L P  +TV   +G  +K 
Sbjct: 49  LRLTVTRQDEFLFKETPVKCVTIVGVNGECGVYPGHAYEITQLTPAPLTVEMPDGTVKKF 108

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           F S G   +N++ S  I   E  P+  LD  AA   L++ QS L+SA  + A+A  +I +
Sbjct: 109 FTSGGFAHINNEGSCDINCVECIPLTELDVDAAEKALAQQQSALNSAHDDKARAVIEIRI 168

Query: 141 EVAEAL 146
            V E++
Sbjct: 169 GVLESV 174


>gi|218887917|ref|YP_002437238.1| F0F1 ATP synthase subunit epsilon [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|20137564|sp|Q9S5B5.1|ATPE_DESVM RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|5811569|dbj|BAA83614.1| F1F0-ATPase epsilon subunit [Desulfovibrio vulgaris]
 gi|218758871|gb|ACL09770.1| ATP synthase F1, epsilon subunit [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 134

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 2/95 (2%)

Query: 36  QNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSV 95
           + V  V  P + G FGILPNH+P L+ L  G +  Y+  G +  IFVS G   V+D+  V
Sbjct: 19  EKVDYVGAPGYEGEFGILPNHIPFLSALNIGSL-YYKAGGKTHWIFVSGGFAEVSDN-KV 76

Query: 96  QIIAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
            ++AE A   + +D   AR    +A+  L+ A  +
Sbjct: 77  TVLAESAERAEDIDLERARKAKERAEQRLAQAKEK 111


>gi|347733981|ref|ZP_08867034.1| ATP synthase F1, epsilon subunit [Desulfovibrio sp. A2]
 gi|347517218|gb|EGY24410.1| ATP synthase F1, epsilon subunit [Desulfovibrio sp. A2]
          Length = 134

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 2/95 (2%)

Query: 36  QNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSV 95
           + V  V  P + G FGILPNH+P L+ L  G +  Y+  G +  IFVS G   V+D+  V
Sbjct: 19  EKVDYVGAPGYEGEFGILPNHIPFLSALNIGSL-YYKAGGKTHWIFVSGGFAEVSDN-KV 76

Query: 96  QIIAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
            ++AE A   + +D   AR    +A+  L+ A  +
Sbjct: 77  TVLAESAERAEDIDLERARKARERAEQRLAQAKEK 111


>gi|115522307|ref|YP_779218.1| F0F1 ATP synthase subunit epsilon [Rhodopseudomonas palustris
           BisA53]
 gi|122298000|sp|Q07UZ6.1|ATPE_RHOP5 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|115516254|gb|ABJ04238.1| ATP synthase F1, epsilon subunit [Rhodopseudomonas palustris
           BisA53]
          Length = 135

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/104 (37%), Positives = 60/104 (57%), Gaps = 3/104 (2%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F L S  K+ ++ + V QVDVP   G FG+L NH P +A+++PG++TV  T G  QKI V
Sbjct: 6   FDLVSPEKLAFSGE-VDQVDVPGIEGDFGVLANHAPVVAVIRPGILTVI-TGGNQQKIVV 63

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSS 126
             G   V+ +  + ++A+ A  V  LDA+     +S  +S L+ 
Sbjct: 64  LGGIAEVS-EKGLTVLADVATSVADLDAAMFAQTVSSMESALAG 106


>gi|444910292|ref|ZP_21230477.1| ATP synthase epsilon chain [Cystobacter fuscus DSM 2262]
 gi|444719229|gb|ELW60026.1| ATP synthase epsilon chain [Cystobacter fuscus DSM 2262]
          Length = 134

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 1/110 (0%)

Query: 43  VPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEA 102
           VP   G FG+ P H P L+++  G +T+    G +   FV+ G + V +D  V ++A+ A
Sbjct: 25  VPGAKGLFGVRPGHTPFLSLMDAGTLTLKGEGGHTDNYFVAGGFVEVTND-KVLVLADVA 83

Query: 103 HPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEALKIFVSS 152
            P+  +D   AR  LS++   L   SS+ A+   + AV   E  +I  SS
Sbjct: 84  EPISGIDVEGARRRLSESMDRLRGLSSDDARFAVEQAVVRRETARIAASS 133


>gi|365898840|ref|ZP_09436772.1| ATP synthase subunit epsilon, membrane-bound, F1 sector
           [Bradyrhizobium sp. STM 3843]
 gi|365420330|emb|CCE09314.1| ATP synthase subunit epsilon, membrane-bound, F1 sector
           [Bradyrhizobium sp. STM 3843]
          Length = 135

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 3/108 (2%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F L S  K+ ++ Q V QVDVP   G FG+L  H P +A L+PG++TV  T    +KI V
Sbjct: 6   FDLVSPEKIAFSGQ-VDQVDVPGLEGDFGVLAGHAPFVAALRPGILTVT-TGNTREKIIV 63

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
           + G   V+ +  + ++A+ A  +  LD +A  D ++K +++L+    +
Sbjct: 64  AGGLAEVS-EKGLTVLADIATSLAELDRTALADEIAKMEAKLAEKEGD 110


>gi|146094218|ref|XP_001467220.1| putative ATP synthase, epsilon chain [Leishmania infantum JPCM5]
 gi|398019826|ref|XP_003863077.1| ATP synthase, epsilon chain, putative [Leishmania donovani]
 gi|134071584|emb|CAM70273.1| putative ATP synthase, epsilon chain [Leishmania infantum JPCM5]
 gi|322501308|emb|CBZ36387.1| ATP synthase, epsilon chain, putative [Leishmania donovani]
          Length = 181

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 62/126 (49%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           +  T+   ++  +    VK V +   +G  G+ P H   +  L P  +TV   +G  +K 
Sbjct: 49  LRLTVTRQDEFLFKEAPVKCVTIVGVNGECGVYPGHAYEITQLTPAPLTVEMPDGTVKKY 108

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           F S G   +N++ S  I   E  P+  LD  AA   L++ QS L+SA  + A+A  +I +
Sbjct: 109 FTSGGFAHINNEGSCDINCVECIPLTELDVDAAEKALAQQQSALNSAHDDKARAVIEIRI 168

Query: 141 EVAEAL 146
            V E++
Sbjct: 169 GVLESV 174


>gi|389690889|ref|ZP_10179782.1| ATP synthase, F1 epsilon subunit [Microvirga sp. WSM3557]
 gi|388589132|gb|EIM29421.1| ATP synthase, F1 epsilon subunit [Microvirga sp. WSM3557]
          Length = 133

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 66/125 (52%), Gaps = 2/125 (1%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F L S  +V ++  +V+ V +P+  G   ++P H PT+ +L PG++ + + +G   + FV
Sbjct: 6   FELISPERVLFSG-DVRAVMLPATEGDMTVMPGHEPTIVMLNPGIVALTDAQGHGHRAFV 64

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEV 142
            SG + +  +S V ++AE   P + L      + + + ++   +   E A+ EA+ A+  
Sbjct: 65  RSGFVEIT-NSGVSVLAERVLPPEELTRDRLDEEILRFETMRDALRDEKARREAEFAISR 123

Query: 143 AEALK 147
            E +K
Sbjct: 124 LEQVK 128


>gi|298293436|ref|YP_003695375.1| ATP synthase F1 subunit epsilon [Starkeya novella DSM 506]
 gi|296929947|gb|ADH90756.1| ATP synthase F1, epsilon subunit [Starkeya novella DSM 506]
          Length = 138

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 3/119 (2%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F L S  ++ Y+   V +V VP   G FGIL  H P ++ LKPG++T+ + +G ++K+FV
Sbjct: 6   FELVSPERLVYSG-TVSEVVVPGTEGEFGILAGHAPFVSTLKPGILTI-KGDGATRKLFV 63

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVE 141
             G    N    + ++AE A P+  L A     ++  A+ ++  A  ET +    + +E
Sbjct: 64  RGGFAEAN-PQGLTVLAETAIPLAELHAENLTQMIKDAEEDVEDAKDETTRNRRLVFLE 121


>gi|383459462|ref|YP_005373451.1| F0F1 ATP synthase subunit epsilon [Corallococcus coralloides DSM
           2259]
 gi|380732147|gb|AFE08149.1| F0F1 ATP synthase subunit epsilon [Corallococcus coralloides DSM
           2259]
          Length = 134

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 60/101 (59%), Gaps = 6/101 (5%)

Query: 43  VPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEA 102
           VP   G FG+ P H P L++++PG +T+ E  G   + FV+ G + V++D  V ++A+ A
Sbjct: 25  VPGGEGLFGVRPGHTPFLSLVEPGTLTLIEA-GKQDRYFVAGGFVEVSND-KVLVLADAA 82

Query: 103 HPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
             V+ +D + AR  + +AQ+ L   ++    A+A+ A+E A
Sbjct: 83  EHVNGIDVAGARRRMEEAQARLKDLNA----ADARYALEQA 119


>gi|217976538|ref|YP_002360685.1| F0F1 ATP synthase subunit epsilon [Methylocella silvestris BL2]
 gi|254809373|sp|B8EQQ2.1|ATPE_METSB RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|217501914|gb|ACK49323.1| ATP synthase F1, epsilon subunit [Methylocella silvestris BL2]
          Length = 133

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 6/130 (4%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F L S  ++ +    V+ V VP   G F +L +H P +  LKPGVI + E++ +  + FV
Sbjct: 6   FELVSPERLVFAGA-VESVVVPGTEGQFTVLKDHAPLMTTLKPGVIDIAESKALLHRFFV 64

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS-SETAKAEAQI--- 138
             G   V+  + + I+AE+A P++SLDA+     +  A+ +++ AS  ET +  A+    
Sbjct: 65  RGGFAEVS-PAGLTILAEQAIPLESLDAARIDADIKDAEEDIADASVDETRRLAAEKRDQ 123

Query: 139 AVEVAEALKI 148
            +E+  ALKI
Sbjct: 124 LLELKAALKI 133


>gi|443267233|ref|YP_007374805.1| ATP synthase epsilon chain (chloroplast) [Ophioglossum
           californicum]
 gi|441017934|gb|AGC26718.1| ATP synthase epsilon chain (chloroplast) [Ophioglossum
           californicum]
          Length = 132

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 3/125 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           ++  + + N++ + N  V++V + + SG  GILPNH P L  L  GV+ V   E  S  +
Sbjct: 3   LNLCVMAPNRIVW-NSEVQEVILSTNSGRIGILPNHAPLLTALDIGVMRVRVNEQWSN-M 60

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
            +  G  T+ D++ + ++  EA      D   ARD   KAQ++L+ A  +    EA +A 
Sbjct: 61  ALMGGFATI-DNNKITVLVNEAEGAIDTDLEEARDTFMKAQTDLARAEGKKETIEADLAF 119

Query: 141 EVAEA 145
           + A+A
Sbjct: 120 KRAKA 124


>gi|397569263|gb|EJK46633.1| hypothetical protein THAOC_34688, partial [Thalassiosira oceanica]
          Length = 222

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 11/152 (7%)

Query: 4   RLVTSATRLARRGYAD--------QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPN 55
           R+ T A + A R ++         +++F L    +  + +  V  V VP   G + +  +
Sbjct: 64  RIATPAAKSAVRRFSSPAPASGLMKLNFNLP--QQTLFDSTEVSSVVVPGAMGEYEVTAD 121

Query: 56  HVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARD 115
           HVP +A LK G++TV    G  +K FV  G    ++ S+  I+  EA  VD LD SA   
Sbjct: 122 HVPIVAELKAGMLTVKHGGGEEEKYFVPGGFSLTHEGSTTDIVCPEAVKVDDLDVSAVTA 181

Query: 116 VLSKAQSELSSASSETAK-AEAQIAVEVAEAL 146
               A+S  +SA + +A  AEA I VEV  A+
Sbjct: 182 NYEAAKSRAASAEAGSADAAEAMIEVEVNRAM 213


>gi|384261870|ref|YP_005417056.1| ATP synthase subunit epsilon [Rhodospirillum photometricum DSM 122]
 gi|378402970|emb|CCG08086.1| ATP synthase epsilon chain [Rhodospirillum photometricum DSM 122]
          Length = 134

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 70/130 (53%), Gaps = 2/130 (1%)

Query: 17  YADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGV 76
            A+  +F L S  ++  + + V+   VP   G FG +P H P L+ ++PGVI+++    V
Sbjct: 1   MAETTEFELVSPGRLLLS-EPVEMAVVPGTEGDFGAMPRHAPMLSTVRPGVISIHNGGKV 59

Query: 77  SQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEA 136
           ++++F++ G   V  +    I+A+EA  +  L  +A ++ L  A   +  A +E  K  A
Sbjct: 60  TRRLFIAGGFAEVTAERCT-ILADEAIDLADLTPAAVQERLQAADDLVKEARTEDEKRAA 118

Query: 137 QIAVEVAEAL 146
           + A  +A+AL
Sbjct: 119 ERARFLAQAL 128


>gi|78356031|ref|YP_387480.1| ATP synthase F0F1 subunit epsilon [Desulfovibrio alaskensis G20]
 gi|119361428|sp|Q313W1.1|ATPE_DESDG RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|78218436|gb|ABB37785.1| ATP synthase F1, epsilon subunit [Desulfovibrio alaskensis G20]
          Length = 134

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 3/123 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           +   + + +KV  + Q V  V  P + G FG+LPNH+P L+ L  G +  Y+  G ++  
Sbjct: 5   LQLEIVTPDKVVLSEQ-VDYVGAPGYEGEFGVLPNHIPFLSALSIGSL-YYKAGGKTRYA 62

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           FVS G   V+D+  V I+AE A   + +D   AR    +A+  L +   +     A+ A+
Sbjct: 63  FVSGGFAEVSDN-KVTILAESAERAEDIDIERARKAQQRAEERLKAEREKIDATRAEAAL 121

Query: 141 EVA 143
           + A
Sbjct: 122 KRA 124


>gi|402502387|gb|AFQ60644.1| Nano-lantern_ATP0 [synthetic construct]
          Length = 677

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/109 (33%), Positives = 61/109 (55%), Gaps = 2/109 (1%)

Query: 35  NQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSS 94
           + +++ V V + SG  GILP H+PT A LK G + + + +G ++ + VS GT+ V  D  
Sbjct: 475 DADIEMVSVRAESGDLGILPGHIPTKAPLKIGAVRL-KKDGQTEMVAVSGGTVEVRPD-H 532

Query: 95  VQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
           V I A+ A   + +D   A     +AQ  L+S S +T    A++A++ A
Sbjct: 533 VTINAQAAETAEGIDKERAEAARQRAQERLNSQSDDTDIRRAELALQRA 581


>gi|402502383|gb|AFQ60642.1| Nano-lantern_ATP1 [synthetic construct]
          Length = 680

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/109 (33%), Positives = 61/109 (55%), Gaps = 2/109 (1%)

Query: 35  NQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSS 94
           + +++ V V + SG  GILP H+PT A LK G + + + +G ++ + VS GT+ V  D  
Sbjct: 478 DADIEMVSVRAESGDLGILPGHIPTKAPLKIGAVRL-KKDGQTEMVAVSGGTVEVRPD-H 535

Query: 95  VQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
           V I A+ A   + +D   A     +AQ  L+S S +T    A++A++ A
Sbjct: 536 VTINAQAAETAEGIDKERAEAARQRAQERLNSQSDDTDIRRAELALQRA 584


>gi|358061683|ref|ZP_09148337.1| ATP synthase F1, epsilon subunit [Clostridium hathewayi WAL-18680]
 gi|356700442|gb|EHI61948.1| ATP synthase F1, epsilon subunit [Clostridium hathewayi WAL-18680]
          Length = 132

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 69/126 (54%), Gaps = 3/126 (2%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           AD     + + +K+FY    +  V++ +  G  G+  NH+P  AI+ PGV+ ++E EG  
Sbjct: 2   ADLFKLKIVTPDKIFYEGDAI-MVELTTTEGQIGVYANHIPLTAIISPGVLKIHE-EGQV 59

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           +K  + SG + +  +  V I+AE A   + +DA+ A +   +A+  L   S+ET    A+
Sbjct: 60  RKASLISGFMEILPEQVV-IMAEVAEWPEEIDANRAEEARVRAERRLKENSAETDTLRAE 118

Query: 138 IAVEVA 143
           +A++ A
Sbjct: 119 MALKRA 124


>gi|154251919|ref|YP_001412743.1| ATP synthase F1 subunit epsilon [Parvibaculum lavamentivorans DS-1]
 gi|171769591|sp|A7HT53.1|ATPE_PARL1 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|154155869|gb|ABS63086.1| ATP synthase F1, epsilon subunit [Parvibaculum lavamentivorans
           DS-1]
          Length = 132

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 72/132 (54%), Gaps = 7/132 (5%)

Query: 17  YADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGV 76
            A++++F L S  ++ ++ Q V  V +P   G  GI+  H P ++ L+PG+I V E EG 
Sbjct: 1   MAEKLNFDLVSPERLLFSGQ-VDMVVIPGSEGDMGIMAGHAPVMSTLRPGIIEV-ENEGA 58

Query: 77  -SQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAE 135
             Q+IFV  G   V   + + ++AE   P+  LDA+A    ++ A  +++ A ++  +  
Sbjct: 59  PRQRIFVRGGFAEVT-PAGLTVLAEFTVPLADLDATALDREIALADKDVADAKNDDKR-- 115

Query: 136 AQIAVEVAEALK 147
            Q A+E  + LK
Sbjct: 116 -QSALEKLDHLK 126


>gi|402773894|ref|YP_006593431.1| ATP synthase subunit epsilon [Methylocystis sp. SC2]
 gi|401775914|emb|CCJ08780.1| ATP synthase epsilon chain [Methylocystis sp. SC2]
          Length = 133

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 2/111 (1%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F L S  K  ++ + V+ V  P   G F +L +H P +  LK GV+TV   EG  +K+FV
Sbjct: 6   FELVSPEKHLFSGE-VESVVAPGADGQFTVLKDHAPVMTTLKAGVVTVAGGEGKVEKLFV 64

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAK 133
             G   VN  S   I+AE+A P+  +D +     +  A+ +++ A S+ A+
Sbjct: 65  RGGFADVN-ASGFTILAEQAIPLSEIDVAKVDADIRNAREDIADAKSDEAR 114


>gi|402502385|gb|AFQ60643.1| CT-Nano-lantern_ATP1 [synthetic construct]
          Length = 750

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/109 (33%), Positives = 61/109 (55%), Gaps = 2/109 (1%)

Query: 35  NQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSS 94
           + +++ V V + SG  GILP H+PT A LK G + + + +G ++ + VS GT+ V  D  
Sbjct: 548 DADIEMVSVRAESGDLGILPGHIPTKAPLKIGAVRL-KKDGQTEMVAVSGGTVEVRPD-H 605

Query: 95  VQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
           V I A+ A   + +D   A     +AQ  L+S S +T    A++A++ A
Sbjct: 606 VTINAQAAETAEGIDKERAEAARQRAQERLNSQSDDTDIRRAELALQRA 654


>gi|338741536|ref|YP_004678498.1| ATP synthase subunit epsilon [Hyphomicrobium sp. MC1]
 gi|337762099|emb|CCB67934.1| ATP synthase epsilon chain [Hyphomicrobium sp. MC1]
          Length = 131

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 67/119 (56%), Gaps = 5/119 (4%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEG-VSQKIF 81
           F L S  +V   + + +QV VP   G F +L  HVP ++ L PGV+ V  T G V +++F
Sbjct: 7   FELVSPERVLM-SVDAEQVVVPGTDGEFTVLAGHVPVISTLVPGVLDV--TAGSVHKRLF 63

Query: 82  VSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           V SG   V D + + ++AE+A+ VD + A+     L  A++EL++A  + AK  A   V
Sbjct: 64  VKSGFAEV-DPARLTVLAEKAYDVDEMSAATIAAELKTAEAELAAAKDDDAKRMADTLV 121


>gi|378827725|ref|YP_005190457.1| ATP synthase subunit epsilon [Sinorhizobium fredii HH103]
 gi|365180777|emb|CCE97632.1| ATP synthase epsilon chain [Sinorhizobium fredii HH103]
          Length = 134

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 2/114 (1%)

Query: 17  YADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGV 76
            AD  +F L S  ++  + Q V +V +P+  G   ++ NH PT+  +KPGV+TV   +G 
Sbjct: 1   MADSFNFELVSPERLLLSAQ-VTEVVIPATEGEMTVMANHAPTMTTIKPGVVTVKTADGK 59

Query: 77  SQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
           +++  V  G   +   +   ++AE A  VD LD +   + + +A++EL  A  E
Sbjct: 60  TERFAVFGGFADIL-PTGCTLLAESAVHVDELDRTVLENRIDEARAELEGAIDE 112


>gi|398355367|ref|YP_006400831.1| ATP synthase subunit epsilon [Sinorhizobium fredii USDA 257]
 gi|390130693|gb|AFL54074.1| ATP synthase epsilon chain [Sinorhizobium fredii USDA 257]
          Length = 134

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 2/114 (1%)

Query: 17  YADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGV 76
            AD  +F L S  ++  + Q V +V +P+  G   ++ NH PT+  +KPGV+TV   +G 
Sbjct: 1   MADSFNFELVSPERLLLSAQ-VTEVVIPATEGEMTVMANHAPTMTTIKPGVVTVKTADGK 59

Query: 77  SQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
           +++  V  G   +   +   ++AE A  VD LD +   + + +A++EL  A  E
Sbjct: 60  TERFAVFGGFADIL-PTGCTLLAESAVHVDELDRTVLENRIDEARAELEGAIDE 112


>gi|416908225|ref|ZP_11931123.1| ATP synthase F1, epsilon subunit [Burkholderia sp. TJI49]
 gi|325528837|gb|EGD05885.1| ATP synthase F1, epsilon subunit [Burkholderia sp. TJI49]
          Length = 157

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 3/115 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETE-GVSQK 79
           M   + S     Y  +    V VP  SG  GI P+H P L  LKPGV+T+ +   G  ++
Sbjct: 5   MKLDILSAEGALYAGE-AHFVAVPGESGELGIYPHHAPLLTRLKPGVVTLVDARSGERRR 63

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKA 134
           + V+ G + V+ +  V +IA+ A     LDA  ARD  S A       + E+ +A
Sbjct: 64  LLVAGGVLEVSRE-GVTLIADHALRTPELDALRARDARSAANDWRRRYAQESRRA 117


>gi|27375550|ref|NP_767079.1| ATP synthase F0F1 subunit epsilon [Bradyrhizobium japonicum USDA
           110]
 gi|60389778|sp|Q89X75.1|ATPE_BRAJA RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|27348687|dbj|BAC45704.1| ATP synthase epsilon chain [Bradyrhizobium japonicum USDA 110]
          Length = 135

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 7/125 (5%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F L S  K+ ++ + V QVD+P   G FG+L  H P +A ++PG++TV  T G  +KI V
Sbjct: 6   FDLVSPEKLAFSGE-VDQVDIPGVEGDFGVLAGHAPVVAAIRPGILTVT-TAGRHEKIIV 63

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEV 142
             G   V+ +  + ++A+ A  +D LD    R   ++  +E+     E    E  +A+E 
Sbjct: 64  LGGLAEVS-EKGLTVLADVATSLDELD----RAQFAETIAEMEEGLKEHEGGELDLAIER 118

Query: 143 AEALK 147
            +  K
Sbjct: 119 LDHYK 123


>gi|92116149|ref|YP_575878.1| F0F1 ATP synthase subunit epsilon [Nitrobacter hamburgensis X14]
 gi|119361397|sp|Q1QQS9.1|ATPE1_NITHX RecName: Full=ATP synthase epsilon chain 1; AltName: Full=ATP
           synthase F1 sector epsilon subunit 1; AltName:
           Full=F-ATPase epsilon subunit 1
 gi|91799043|gb|ABE61418.1| ATP synthase F1 subcomplex epsilon subunit [Nitrobacter
           hamburgensis X14]
          Length = 135

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 63/113 (55%), Gaps = 4/113 (3%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F L S  K+ ++  +V QVDVP   G FG+L  H P +A ++PG++T+  T G  QKI V
Sbjct: 6   FDLVSPEKLTFSG-DVDQVDVPGVEGDFGVLAGHAPVVAAIRPGILTIT-TGGTPQKIIV 63

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSA-SSETAKA 134
             G   V+ +  + ++A+ A  +  LD +   D ++  +++L+    SE  KA
Sbjct: 64  LGGLAEVS-EKGLTVLADVATSIQELDRAQFADTIASMEAKLAEKEGSELDKA 115


>gi|406990228|gb|EKE09907.1| hypothetical protein ACD_16C00100G0069 [uncultured bacterium]
          Length = 138

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 2/89 (2%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           FTL +  K+ +  ++V  V +P   G  G+L NH P L +L+PGV+ +YE   +  +IFV
Sbjct: 6   FTLVTPEKILF-KKDVSMVVIPGLEGDIGVLSNHAPLLTVLRPGVVRIYEGSDILLRIFV 64

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDAS 111
             G   +       ++  E   +++LD S
Sbjct: 65  DGGFSEITPQKCTALVT-EGTSLEALDKS 92


>gi|398308650|ref|ZP_10512124.1| F0F1 ATP synthase subunit epsilon [Bacillus mojavensis RO-H-1]
          Length = 132

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 2/107 (1%)

Query: 37  NVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQ 96
           N++ V V + SG  GILP H+PT+A LK G + + + +G ++ + VS G I V  D  V 
Sbjct: 19  NIEMVSVRAESGDLGILPGHIPTVAPLKIGAVRL-KKDGQTELVAVSGGFIEVRPD-QVT 76

Query: 97  IIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
           I+A+ A   + +D   A     +AQ  L+S S +T    A++A++ A
Sbjct: 77  ILAQTAETAEGIDKERAEAARQRAQERLNSQSDDTDIRRAELALQRA 123


>gi|405118259|gb|AFR93033.1| ATP synthase delta chain [Cryptococcus neoformans var. grubii H99]
          Length = 136

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 35/170 (20%)

Query: 50  FGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLD 109
            GIL NHVP++  L+PGVI V E  G   K +                           D
Sbjct: 1   MGILANHVPSVEALRPGVIEVIEENGQQGKKW--------------------------FD 34

Query: 110 ASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEALKIFVSSGTITVNDDSSVQIIAEE 169
           A+     +SK ++           A    A+   +  +I  S+G  TV+ ++++ I A E
Sbjct: 35  ATGGSTDISKLRAMF---------APVYYALSRIKGGEIEFSAGFATVHGNNALTINAVE 85

Query: 170 AHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEALVAAAS 219
           A+P+D     + +  L+ A   L S + E+ KAEA+I V+V E L AA S
Sbjct: 86  AYPLDKFSPESIKSGLADANRVLGSNAPESEKAEARIEVDVYEGLQAALS 135


>gi|297183579|gb|ADI19706.1| hypothetical protein [uncultured bacterium EB000_36F02]
          Length = 133

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 63/118 (53%), Gaps = 2/118 (1%)

Query: 30  KVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITV 89
           K F +   V +V VP+F G  GIL +HV  ++ L+PG++ + +++   +  +V  G I  
Sbjct: 14  KSFLSKDGVSEVVVPAFEGDMGILKDHVSIISFLRPGLLRIIDSKSSEETFYVEDGVIEF 73

Query: 90  NDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS-SETAKAEAQIAVEVAEAL 146
            ++  + ++      +  +D +  RD+L KA+ E  + + S+ AK      +EV ++L
Sbjct: 74  KNN-CLSVLTSNIFDIKKIDKNKIRDILVKAEKEGQNPNISDQAKYLVNHKIEVLKSL 130


>gi|298245832|ref|ZP_06969638.1| ATP synthase F1, epsilon subunit [Ktedonobacter racemifer DSM
           44963]
 gi|297553313|gb|EFH87178.1| ATP synthase F1, epsilon subunit [Ktedonobacter racemifer DSM
           44963]
          Length = 154

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 2/109 (1%)

Query: 35  NQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSS 94
           N     V  P   G  GILP+H   L  LKPG + + E     +  FVS G + V+ D  
Sbjct: 23  NGEATLVSAPGVEGRLGILPHHAALLTFLKPGELRI-ELGDAEEPFFVSGGFLEVSHD-R 80

Query: 95  VQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
           V I+A+ A   +++D + A++    A+  L  + S+  +AEAQ A+E A
Sbjct: 81  VTILADAAEEGETIDEARAQEARRLAEERLVESRSQNDRAEAQAALERA 129


>gi|146337565|ref|YP_001202613.1| ATP synthase F0F1 subunit epsilon [Bradyrhizobium sp. ORS 278]
 gi|365887316|ref|ZP_09426169.1| ATP synthase subunit epsilon, membrane-bound, F1 sector
           [Bradyrhizobium sp. STM 3809]
 gi|166222435|sp|A4YKE1.1|ATPE_BRASO RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|146190371|emb|CAL74367.1| ATP synthase subunit epsilon, membrane-bound, F1 sector
           [Bradyrhizobium sp. ORS 278]
 gi|365337095|emb|CCD98700.1| ATP synthase subunit epsilon, membrane-bound, F1 sector
           [Bradyrhizobium sp. STM 3809]
          Length = 135

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 3/108 (2%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F L S  K+ ++ + V QVDVP   G FG+L  H P +A L+PG++TV  T G  QKI V
Sbjct: 6   FDLVSPEKIAFSGE-VDQVDVPGQEGDFGVLAGHAPFVATLRPGILTVT-TGGTQQKIIV 63

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
             G   ++ +  + I+A+ A  +  LD +A    +S  +++L+    +
Sbjct: 64  LGGLAEIS-EKGLTILADVATSLKELDQTAFATEISGMEAKLNEKQGD 110


>gi|308051486|ref|YP_003915052.1| ATP synthase F1 subcomplex subunit epsilon [Ferrimonas balearica
           DSM 9799]
 gi|307633676|gb|ADN77978.1| ATP synthase F1 subcomplex epsilon subunit [Ferrimonas balearica
           DSM 9799]
          Length = 141

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 3/109 (2%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+ + V    G  GILP HVP L  +KPG++ + +  G  + I++S G + V  D  V +
Sbjct: 21  VETLQVTGTEGELGILPGHVPLLTAIKPGMVRIVKQHGEVEVIYLSGGILEVQPDC-VTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           +A+ A   + +D  AAR+    A+  +++A  +     AQI  E+A+AL
Sbjct: 80  LADVAVRAEDIDVEAAREAKRNAEERIANAGVDFDYDTAQI--ELAKAL 126


>gi|90421697|ref|YP_530067.1| F0F1 ATP synthase subunit epsilon [Rhodopseudomonas palustris
           BisB18]
 gi|119367771|sp|Q21CY8.1|ATPE_RHOPB RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|90103711|gb|ABD85748.1| ATP synthase F1, epsilon subunit [Rhodopseudomonas palustris
           BisB18]
          Length = 135

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 3/104 (2%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F L S  K+ ++ Q V QVD+P   G FG+L  H P +A+++PG++T+    G  QKI V
Sbjct: 6   FDLVSPEKLAFSGQ-VDQVDIPGVEGDFGVLAGHAPVVAVIRPGLLTI-TAGGNQQKIVV 63

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSS 126
             G   V+ D  + ++A+ A  V  LD +     +S  +S L+ 
Sbjct: 64  LGGLAEVS-DKGLTVLADVATSVAELDTAQFAQTISSMESSLAG 106


>gi|340054344|emb|CCC48640.1| putative ATP synthase, epsilon chain [Trypanosoma vivax Y486]
          Length = 181

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 66/128 (51%)

Query: 19  DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQ 78
           + + FTL   ++     + VK V V   +G +GI P H   +  L P  +TV   +G ++
Sbjct: 48  ESLRFTLTRQDEFILKEETVKCVTVKGTNGEYGIYPGHSYKIVQLVPSPLTVEYADGATR 107

Query: 79  KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 138
           K FVS G   +N++ S  +   E  P++ LD + A   L+  Q+ L+SA  E AK+   I
Sbjct: 108 KYFVSGGFAHINNEGSCDVNTVECAPLEDLDLATAEKELAAQQAALASAKDEKAKSVVDI 167

Query: 139 AVEVAEAL 146
            + V EA+
Sbjct: 168 RISVLEAV 175


>gi|2493048|sp|Q95312.1|ATPD_PIG RecName: Full=ATP synthase subunit delta, mitochondrial; AltName:
          Full=F-ATPase delta subunit; Flags: Precursor
          Length = 80

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 33/43 (76%)

Query: 21 MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAIL 63
          M FT AS  +VF+   NV+QVDVP+ +GAFGIL +HVPTL +L
Sbjct: 38 MSFTFASPTQVFFNGANVRQVDVPTQTGAFGILASHVPTLQVL 80


>gi|297618428|ref|YP_003703587.1| ATP synthase F1 subunit epsilon [Syntrophothermus lipocalidus DSM
           12680]
 gi|297146265|gb|ADI03022.1| ATP synthase F1, epsilon subunit [Syntrophothermus lipocalidus DSM
           12680]
          Length = 139

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 5/103 (4%)

Query: 43  VPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI--IAE 100
           VP+  G  G+L NH P +A LK GV+    T+G+++ + VS G + V D+ ++ +   AE
Sbjct: 27  VPAVEGELGVLRNHAPMVAGLKIGVLRYRGTDGITRHMAVSGGFMEVIDNEAIVLAETAE 86

Query: 101 EAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
               +D L A AA++   +A+  L   + E     AQ+A++ A
Sbjct: 87  RGSEIDILRAKAAKE---RAERRLQQRTEEINFVRAQMALQRA 126


>gi|188580720|ref|YP_001924165.1| F0F1 ATP synthase subunit epsilon [Methylobacterium populi BJ001]
 gi|179344218|gb|ACB79630.1| ATP synthase F1, epsilon subunit [Methylobacterium populi BJ001]
          Length = 133

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 2/86 (2%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F      +  Y+ + V+ V +P   G   +LP H P L  LK GVITV ET G  ++I+V
Sbjct: 6   FDFVGPERTLYSGE-VEAVQLPGAEGEMTVLPGHAPVLTTLKVGVITVTETAGNGKRIYV 64

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSL 108
             G   +   +SV ++AE A P++ L
Sbjct: 65  QGGFADIG-PTSVTVLAERAAPIEEL 89


>gi|325192615|emb|CCA27041.1| ATP synthase subunit delta' putative [Albugo laibachii Nc14]
          Length = 170

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 2/129 (1%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVY-ETEGVSQ 78
           ++   L++  + F+    V  + +P   G +G+   H P ++ +KPGVI V+ E E   Q
Sbjct: 34  KITLNLSTPYQCFFKETQVDLIQIPGAVGEYGVTAGHTPIISQMKPGVIKVHVEREKDVQ 93

Query: 79  KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETA-KAEAQ 137
             F + G    + DS   I   E   ++ +D  AA   L+  +S +++A+  +A K EAQ
Sbjct: 94  TFFTAGGFAFTHADSVTDIACVELIKLEDIDRDAAEAGLNNYKSIVATAADGSAEKIEAQ 153

Query: 138 IAVEVAEAL 146
           I +E  +AL
Sbjct: 154 IGLETHQAL 162


>gi|365880195|ref|ZP_09419575.1| ATP synthase subunit epsilon, membrane-bound, F1 sector
           [Bradyrhizobium sp. ORS 375]
 gi|365291762|emb|CCD92106.1| ATP synthase subunit epsilon, membrane-bound, F1 sector
           [Bradyrhizobium sp. ORS 375]
          Length = 135

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 59/103 (57%), Gaps = 3/103 (2%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F L S  K+ ++ + V QVDVP   G FG+L  H P +A L+PG++TV  T G  QKI V
Sbjct: 6   FDLVSPEKIAFSGE-VDQVDVPGEQGDFGVLAGHAPFVATLRPGILTVT-TGGTQQKIIV 63

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELS 125
             G   ++ +  + I+A+ A  +  LD +A    +S  +++L+
Sbjct: 64  LGGLAEIS-EKGLTILADVATSLKELDQTAFAAEISGMEAKLN 105


>gi|262277908|ref|ZP_06055701.1| ATP synthase F1, epsilon subunit [alpha proteobacterium HIMB114]
 gi|262225011|gb|EEY75470.1| ATP synthase F1, epsilon subunit [alpha proteobacterium HIMB114]
          Length = 127

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 3/109 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           M   + +  KV ++ +++  V +P   G  GIL NH+P +  LKPGVI + ++E    K 
Sbjct: 1   MQVDIVTPEKVLFSEKDISMVTIPGIEGQMGILDNHLPVVTFLKPGVINIEKSE---NKY 57

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASS 129
           F ++G +    ++S+ I+ +E   V         ++  +A  +L   +S
Sbjct: 58  FFTTGGVVDFKNNSLSILCQEVFDVKDFSDKQINNLKERANKKLEDTNS 106


>gi|18860317|ref|NP_569635.1| ATP synthase CF1 epsilon subunit [Psilotum nudum]
 gi|22653658|sp|Q8WI12.1|ATPE_PSINU RecName: Full=ATP synthase epsilon chain, chloroplastic; AltName:
           Full=ATP synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|18389470|dbj|BAB84222.1| ATP synthase epsilon subunit [Psilotum nudum]
 gi|441018023|gb|AGC26799.1| ATP synthase epsilon chain (chloroplast) [Psilotum nudum]
          Length = 133

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 66/125 (52%), Gaps = 3/125 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           ++  + + N++ + N  V+++ + + +G  GILPNH P L  L  GV+ +   E  S  +
Sbjct: 2   LNLRVIAPNRIVW-NSEVREIILSTNNGQMGILPNHAPLLTALDIGVMKIRIDERWSN-M 59

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
            +  G  T+ D++ + I+  EA     +D   A++   KAQ+ L+ A  +    EA +A 
Sbjct: 60  ALMGGFATI-DNNQITILVNEAEKSSEIDPEEAQETFQKAQANLTRAEGKRKTIEAHLAF 118

Query: 141 EVAEA 145
           + A+A
Sbjct: 119 KRAKA 123


>gi|254456387|ref|ZP_05069816.1| ATP synthase F1, epsilon subunit [Candidatus Pelagibacter sp.
           HTCC7211]
 gi|207083389|gb|EDZ60815.1| ATP synthase F1, epsilon subunit [Candidatus Pelagibacter sp.
           HTCC7211]
          Length = 130

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 64/118 (54%), Gaps = 3/118 (2%)

Query: 30  KVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITV 89
           K F   ++V +V VP+F G  GIL +H+  ++ LKPG+I +    G  +  +V  G +  
Sbjct: 14  KSFLVKEDVMEVVVPAFEGEMGILKDHISIISFLKPGIIKILSKSG-DENYYVEDGIVEF 72

Query: 90  NDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS-SETAKAEAQIAVEVAEAL 146
            ++ ++ I+      ++ LD S  +D+L +A+ E S +  ++ +K      +EV ++L
Sbjct: 73  KNN-NLSILTSSIFNLNDLDKSKQQDLLKQAEEEASKSEINDQSKYLVDQKIEVLKSL 129


>gi|83944755|ref|ZP_00957121.1| ATP synthase F1, epsilon subunit [Oceanicaulis sp. HTCC2633]
 gi|83851537|gb|EAP89392.1| ATP synthase F1, epsilon subunit [Oceanicaulis sp. HTCC2633]
          Length = 133

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 3/129 (2%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           AD++ F L S  +  +  + V  V VP   G FG+L NH P ++ ++ G I+V+    VS
Sbjct: 2   ADKLHFDLVSPERRVFAGE-VDMVVVPGSEGDFGVLANHAPFMSTIRTGAISVHSGNDVS 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
            + F+  G   V   + + I+AEEA  +  ++A      L++A+ +L  A  +  + EA+
Sbjct: 61  -RTFIRGGFAEVT-AAGLTILAEEAIDLADVNAEDVSKSLAEAREDLGQARDDEERHEAE 118

Query: 138 IAVEVAEAL 146
             +E  +AL
Sbjct: 119 ARIEKFQAL 127


>gi|75674632|ref|YP_317053.1| ATP synthase F0F1 subunit epsilon [Nitrobacter winogradskyi Nb-255]
 gi|119367752|sp|Q3SVJ0.1|ATPE_NITWN RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|74419502|gb|ABA03701.1| ATP synthase F1 subcomplex epsilon subunit [Nitrobacter
           winogradskyi Nb-255]
          Length = 135

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 4/113 (3%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F L S  K+ ++ + V QVD+P   G FG+L  H P +A ++PG++TV    G  QKI V
Sbjct: 6   FDLVSPEKLAFSGE-VDQVDIPGVEGDFGVLAGHAPVVAAIRPGMLTVT-AGGTQQKIIV 63

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSA-SSETAKA 134
             G   V+ +  + ++A+ A  ++ LD +   D ++  ++ L+    SE  KA
Sbjct: 64  LGGLAEVS-EKGLTVLADVATSIEELDRAQFADTIAGMEARLTDKEGSELDKA 115


>gi|383930588|ref|YP_005352958.1| atpE gene product (chloroplast) [Mankyua chejuensis]
 gi|325975854|gb|ADZ47990.1| ATP synthase CF1 epsilon subunit [Mankyua chejuensis]
          Length = 132

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 67/125 (53%), Gaps = 3/125 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           ++  + + N++ + N  V++V + + SG  GILPNH P L  L  GV+ +   E  S  +
Sbjct: 3   LNLRVMAPNRIVW-NSEVQEVILSTNSGQIGILPNHAPLLTALDIGVMRIRINEQWS-NM 60

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
            +  G  T+ D++ + I+  EA     ++   A+D   KAQ++++ A  +    EA +A 
Sbjct: 61  ALMGGFATI-DNNQITILVNEAERAIDINPEEAQDAFQKAQTDMARAKGKKETIEANLAF 119

Query: 141 EVAEA 145
           + A+A
Sbjct: 120 KRAKA 124


>gi|46579187|ref|YP_009995.1| F0F1 ATP synthase subunit epsilon [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120603239|ref|YP_967639.1| F0F1 ATP synthase subunit epsilon [Desulfovibrio vulgaris DP4]
 gi|387152581|ref|YP_005701517.1| ATP synthase F1 subunit epsilon [Desulfovibrio vulgaris RCH1]
 gi|60389679|sp|Q72E05.1|ATPE_DESVH RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|166222455|sp|A1VFJ6.1|ATPE_DESVV RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|46448600|gb|AAS95254.1| ATP synthase, F1 epsilon subunit [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120563468|gb|ABM29212.1| ATP synthase F1 subcomplex epsilon subunit [Desulfovibrio vulgaris
           DP4]
 gi|311233025|gb|ADP85879.1| ATP synthase F1, epsilon subunit [Desulfovibrio vulgaris RCH1]
          Length = 134

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 2/90 (2%)

Query: 36  QNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSV 95
           + V  V  P F G FG+LP+H+P L+ L  G +  Y+  G +  +FVS G   V+D+  V
Sbjct: 19  EQVDYVGAPGFEGEFGVLPSHIPFLSALAIGSL-YYKANGKTHHVFVSGGFAEVSDN-KV 76

Query: 96  QIIAEEAHPVDSLDASAARDVLSKAQSELS 125
            ++AE A   + +D   AR    +A+  L+
Sbjct: 77  TVLAESAERAEDIDIDRARKAKDRAEQRLA 106


>gi|429327356|gb|AFZ79116.1| ATP synthase delta/epsilon chain, putative [Babesia equi]
          Length = 153

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 75/146 (51%), Gaps = 6/146 (4%)

Query: 6   VTSATRLARRGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKP 65
           V+   + A     + +  +L S ++ F T   +K V +P   G F +   H P L+ LKP
Sbjct: 4   VSKFLKFATNTVGNGLQLSLLSSHESFLTKFPIKSVTLPGSEGYFTVTQGHSPLLSTLKP 63

Query: 66  GVITV--YETEGVSQKIFVSSGTITV---NDDSSVQIIAEEAHPVDSLDASAARDVLSKA 120
           G+I++   ++  V+ K F+SSG       ++ +S +++  E  P+D LD   A  VL + 
Sbjct: 64  GIISISAQDSNEVT-KYFISSGFFVYRQSDNTNSAEVVGVEIVPLDHLDKERATSVLQEV 122

Query: 121 QSELSSASSETAKAEAQIAVEVAEAL 146
            +E  ++S   AK ++ +A ++  ++
Sbjct: 123 LAESQNSSDPWAKVKSFLAQDLCSSI 148


>gi|323137977|ref|ZP_08073051.1| ATP synthase F1, epsilon subunit [Methylocystis sp. ATCC 49242]
 gi|322396696|gb|EFX99223.1| ATP synthase F1, epsilon subunit [Methylocystis sp. ATCC 49242]
          Length = 133

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 2/111 (1%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F L S  K+ ++  +V+ V  P   G F +L +H P +  LK GV+TV   +G  +K+FV
Sbjct: 6   FELVSPEKLLFSG-DVESVVAPGAEGQFTVLKDHAPVMTTLKSGVVTVAGGDGKVEKLFV 64

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAK 133
             G   V+  +   I+AE A P+  +D +     L  A+ +L+ A +E A+
Sbjct: 65  RGGFADVS-AAGFTILAELAIPLSEIDVAKVDADLKDAREDLADAKTEEAR 114


>gi|23006798|ref|ZP_00048955.1| COG0355: F0F1-type ATP synthase, epsilon subunit (mitochondrial
           delta subunit) [Magnetospirillum magnetotacticum MS-1]
          Length = 133

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 3/114 (2%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F      +  Y+ + V+ V +P   G   +LP H P L  LK GVITV E  G  ++I+V
Sbjct: 6   FDFVGPERTLYSGE-VEAVQLPGAEGEMTVLPGHAPVLTTLKVGVITVTERAGNGKRIYV 64

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEA 136
             G   +  + +V ++AE A P++ +  +   + +  AQ  L  A+ + A+ EA
Sbjct: 65  QGGFADIGPN-TVTVLAERATPIEEITPAMIDEEIRAAQM-LHDATQDLARREA 116


>gi|49574600|ref|NP_848066.2| ATP synthase CF1 epsilon subunit [Adiantum capillus-veneris]
 gi|68565052|sp|Q85FL4.2|ATPE_ADICA RecName: Full=ATP synthase epsilon chain, chloroplastic; AltName:
           Full=ATP synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|48476005|gb|AAP29398.2| ATP synthase CF1 epsilon chain (chloroplast) [Adiantum
           capillus-veneris]
          Length = 132

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 3/125 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           +   + + N++ + N  V+++ + + SG  GILPNH P LA L  GV+ +   +  S   
Sbjct: 3   LSLCVMAPNRIVW-NSEVREIILSTNSGQIGILPNHAPLLAALDMGVLKIRSDKQWSAMA 61

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
            +  G   + D++ V I+  EA     +D   AR     AQ+EL+ A       EA +  
Sbjct: 62  LM--GGFAMIDNNRVIILVNEAERASEIDPEEARKSFQTAQAELAEAEGRRKLIEANLTF 119

Query: 141 EVAEA 145
           + A+A
Sbjct: 120 KRAKA 124


>gi|218666362|ref|YP_002425246.1| ATP synthase F1 subunit epsilon [Acidithiobacillus ferrooxidans
           ATCC 23270]
 gi|218518575|gb|ACK79161.1| ATP synthase F1, epsilon subunit, putative [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 171

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 61/107 (57%), Gaps = 4/107 (3%)

Query: 41  VDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAE 100
           V VP+  G  GILP H P L+ L+PG + + + +G +Q +F+  G + +  D  V I+A+
Sbjct: 26  VAVPAELGEIGILPGHAPLLSGLRPGELRITQPDGQTQILFLEGGMLEIQPD-IVTILAD 84

Query: 101 EAHPVDSLDASAARDVLSKAQSELSS---ASSETAKAEAQIAVEVAE 144
            +  +  +D   +R+ +  AQS L+     + + A+AE ++  EVA+
Sbjct: 85  ASLRIADIDIHESRERIKDAQSTLAKRAVPAMDFARAELELQREVAK 131


>gi|452944275|ref|YP_007500440.1| ATP synthase F1, epsilon subunit [Hydrogenobaculum sp. HO]
 gi|452882693|gb|AGG15397.1| ATP synthase F1, epsilon subunit [Hydrogenobaculum sp. HO]
          Length = 136

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 4/116 (3%)

Query: 31  VFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVN 90
           V YT + V+ V++P++ G  GIL NH+  L  +KPG+  VY  +     I V  G   + 
Sbjct: 12  VVYTEE-VESVNIPAYDGEMGILENHMLLLTQIKPGL--VYFNKDDKNGIAVGYGFADIT 68

Query: 91  DDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
            D  + I+ EEA PV ++D    + V  +A  +LS A +    +E Q   E+AE  
Sbjct: 69  PDKVI-ILTEEAIPVGNIDLEEYKKVFEEATRKLSDAKTAEEISEWQKKREMAETF 123


>gi|198284154|ref|YP_002220475.1| ATP synthase F1 subunit epsilon [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218665866|ref|YP_002426809.1| ATP synthase F1 subunit epsilon [Acidithiobacillus ferrooxidans
           ATCC 23270]
 gi|198248675|gb|ACH84268.1| ATP synthase F1, epsilon subunit [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218518079|gb|ACK78665.1| ATP synthase F1, epsilon subunit, putative [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 163

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 61/107 (57%), Gaps = 4/107 (3%)

Query: 41  VDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAE 100
           V VP+  G  GILP H P L+ L+PG + + + +G +Q +F+  G + +  D  V I+A+
Sbjct: 18  VAVPAELGEIGILPGHAPLLSGLRPGELRITQPDGQTQILFLEGGMLEIQPD-IVTILAD 76

Query: 101 EAHPVDSLDASAARDVLSKAQSELSS---ASSETAKAEAQIAVEVAE 144
            +  +  +D   +R+ +  AQS L+     + + A+AE ++  EVA+
Sbjct: 77  ASLRIADIDIHESRERIKDAQSTLAKRAVPAMDFARAELELQREVAK 123


>gi|367471802|ref|ZP_09471403.1| ATP synthase subunit epsilon, membrane-bound, F1 sector
           [Bradyrhizobium sp. ORS 285]
 gi|365275895|emb|CCD83871.1| ATP synthase subunit epsilon, membrane-bound, F1 sector
           [Bradyrhizobium sp. ORS 285]
          Length = 135

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 59/103 (57%), Gaps = 3/103 (2%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F L S  K+ ++ + V QVDVP   G FG+L  H P +A L+PG++TV  T G  QKI V
Sbjct: 6   FDLVSPEKIAFSGE-VDQVDVPGEQGDFGVLAGHAPFVATLRPGILTVT-TGGSQQKIIV 63

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELS 125
             G   ++ +  + I+A+ A  +  LD +A    +S  +++L+
Sbjct: 64  LGGLAEIS-EKGLTILADVATSLKELDQTAFAAEISGMEAKLN 105


>gi|296532597|ref|ZP_06895302.1| ATP synthase F1 sector epsilon subunit [Roseomonas cervicalis ATCC
           49957]
 gi|296267088|gb|EFH13008.1| ATP synthase F1 sector epsilon subunit [Roseomonas cervicalis ATCC
           49957]
          Length = 137

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 2/110 (1%)

Query: 22  DFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIF 81
           D  L S  K+   ++ V+   +P+  G  G+LP   P +  LK GVI V E   V++++F
Sbjct: 6   DLELVSPEKLLL-SRPVEMAIIPAAEGEMGVLPGMAPMIVALKGGVIRVQEKGAVTERLF 64

Query: 82  VSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSET 131
           V  G   +   + V ++A+EA PV  L  + A   + +A++   SA+S T
Sbjct: 65  VMGGFAEIT-PTRVTVLADEATPVAELSRAEAAGRVREAEAAYDSAASAT 113


>gi|258406331|ref|YP_003199073.1| F0F1 ATP synthase subunit epsilon [Desulfohalobium retbaense DSM
           5692]
 gi|257798558|gb|ACV69495.1| ATP synthase F1, epsilon subunit [Desulfohalobium retbaense DSM
           5692]
          Length = 138

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 5/111 (4%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVY-ETEGV 76
           A+ + F L + ++    +++V+ V  P  +G FG+LPNH+P L+ L  GV ++Y +T G 
Sbjct: 2   ANTIKFELVTPDRSV-VSEDVEYVGAPGVNGEFGVLPNHIPFLSAL--GVGSLYFKTGGR 58

Query: 77  SQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSA 127
              +FV+ G   ++ D  V ++AE A   + +D   AR    +A+  L  A
Sbjct: 59  RSYVFVAGGFAEISPD-KVTVLAEVAEKAEEIDVERARKARERAEKRLQQA 108


>gi|238025754|ref|YP_002909985.1| F0F1 ATP synthase subunit epsilon [Burkholderia glumae BGR1]
 gi|237874948|gb|ACR27281.1| F0F1 ATP synthase subunit epsilon [Burkholderia glumae BGR1]
          Length = 141

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 60/108 (55%), Gaps = 3/108 (2%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  SG  GILP H P +  ++PG + +    G  + +FV+ G + V    +V ++
Sbjct: 21  KFVALPGESGELGILPGHTPLITRIRPGAVRIESEAGADEFVFVAGGILEVQ-PGAVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASSET--AKAEAQIAVEVAE 144
           A+ A     LDA+ A +   +A+  L +A S+   AKA++++A  +A+
Sbjct: 80  ADTAIRGRDLDAAKAEEAKRRAEETLQNAKSDIDLAKAQSELATAMAQ 127


>gi|223931069|ref|YP_002586930.1| ATP synthase CF1 epsilon subunit (chloroplast) [Syntrichia ruralis]
 gi|219562283|gb|ACL27614.1| ATP synthase CF1 epsilon subunit (chloroplast) [Syntrichia ruralis]
          Length = 133

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 65/125 (52%), Gaps = 3/125 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           ++  + + N++ + N +V+++ + + SG  GILPNH P L  L  G+I +   E  S   
Sbjct: 3   LNLRVMAPNRIVW-NSDVQEIILSTNSGRIGILPNHAPLLTALDIGIIKIRLNEKWSTMA 61

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
            +  G   + D++ + I+  EA   + ++   A++    AQ++LS A       EA + +
Sbjct: 62  LM--GGFAMIDNNQMTILVNEAEKSNEINLQEAQETFQMAQTKLSQAKGRKQVIEANLTL 119

Query: 141 EVAEA 145
           + A+A
Sbjct: 120 KRAKA 124


>gi|420355336|ref|ZP_14856407.1| ATP synthase F1, epsilon subunit [Shigella boydii 4444-74]
 gi|391272882|gb|EIQ31714.1| ATP synthase F1, epsilon subunit [Shigella boydii 4444-74]
          Length = 139

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L+ +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 21  VEKIQVTGSEGELGIYPGHAPLLSAIKPGMIRIVKQHGHEEFIYLSGGILEVQ-SGNVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  +SS         AS+E AKA AQ+ V
Sbjct: 80  LADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELAKAIAQLRV 131


>gi|195953461|ref|YP_002121751.1| ATP synthase F1 subunit epsilon [Hydrogenobaculum sp. Y04AAS1]
 gi|226740264|sp|B4U9G2.1|ATPE_HYDS0 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|195933073|gb|ACG57773.1| ATP synthase F1, epsilon subunit [Hydrogenobaculum sp. Y04AAS1]
          Length = 136

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 4/116 (3%)

Query: 31  VFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVN 90
           + YT + V+ V++P++ G  GIL NH+  L  +KPG+  VY  +     I V  G   + 
Sbjct: 12  IVYTEE-VESVNIPAYDGEMGILENHMLLLTQIKPGL--VYFNKDDKNGIAVGYGFADIT 68

Query: 91  DDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
            D  + I+ EEA PV ++D    + V  +A  +LS A +    +E Q   E+AE  
Sbjct: 69  PDKVI-ILTEEAVPVGNIDLEEYKKVFEEATRKLSDARTAEEISEWQKKREMAETF 123


>gi|321313230|ref|YP_004205517.1| F0F1 ATP synthase subunit epsilon [Bacillus subtilis BSn5]
 gi|384177326|ref|YP_005558711.1| ATP synthase F1, epsilon subunit [Bacillus subtilis subsp. subtilis
           str. RO-NN-1]
 gi|386760332|ref|YP_006233549.1| F0F1 ATP synthase subunit epsilon [Bacillus sp. JS]
 gi|428281306|ref|YP_005563041.1| F0F1 ATP synthase subunit epsilon [Bacillus subtilis subsp. natto
           BEST195]
 gi|430756523|ref|YP_007207802.1| ATP synthase subunit epsilon [Bacillus subtilis subsp. subtilis
           str. BSP1]
 gi|291486263|dbj|BAI87338.1| F0F1 ATP synthase subunit epsilon [Bacillus subtilis subsp. natto
           BEST195]
 gi|320019504|gb|ADV94490.1| F0F1 ATP synthase subunit epsilon [Bacillus subtilis BSn5]
 gi|349596550|gb|AEP92737.1| ATP synthase F1, epsilon subunit [Bacillus subtilis subsp. subtilis
           str. RO-NN-1]
 gi|384933615|gb|AFI30293.1| F0F1 ATP synthase subunit epsilon [Bacillus sp. JS]
 gi|430021043|gb|AGA21649.1| ATP synthase epsilon chain [Bacillus subtilis subsp. subtilis str.
           BSP1]
          Length = 132

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 61/107 (57%), Gaps = 2/107 (1%)

Query: 37  NVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQ 96
           +++ V V + SG  GILP H+PT+A LK G + + + +G ++ + VS G + V  D  V 
Sbjct: 19  DIEMVSVRAESGDLGILPGHIPTVAPLKIGAVRL-KKDGQTEMVAVSGGFVEVRPD-QVT 76

Query: 97  IIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
           I+A+ A   + +D   A     +AQ  L+S S +T    A++A++ A
Sbjct: 77  ILAQAAETAEGIDKERAEAARQRAQERLNSQSDDTDIRRAELALQRA 123


>gi|260432840|ref|ZP_05786811.1| ATP synthase F1, epsilon subunit [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260416668|gb|EEX09927.1| ATP synthase F1, epsilon subunit [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 136

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 70/133 (52%), Gaps = 9/133 (6%)

Query: 17  YADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGV 76
            A+ M F L S  +   + Q    V +P   G    +P+H PT+  L+PG++ V   EG 
Sbjct: 1   MANTMQFDLVSPERSLASLQ-ASAVQIPGADGDMTAMPDHAPTITTLRPGILKVEAPEGT 59

Query: 77  SQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEA 136
           S+ + V+ G   +N D ++ ++AE+A PVD +  S   +++++A+     AS E AK   
Sbjct: 60  SEYL-VTGGFAQINGD-ALSVLAEKAIPVDEVTRSHLDELIAEAR-----ASHEAAKENG 112

Query: 137 QIAVEVAEALKIF 149
           +  + V EA K+ 
Sbjct: 113 EQTI-VDEAAKLL 124


>gi|317050179|ref|YP_004117827.1| ATP synthase F1 subunit epsilon [Pantoea sp. At-9b]
 gi|316951796|gb|ADU71271.1| ATP synthase F1, epsilon subunit [Pantoea sp. At-9b]
          Length = 139

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V   S+  +
Sbjct: 21  VQKIQVSGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGEEEYIYLSGGVLEVQPGSTT-V 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A   + LD + A +   KA+  +SS         AS+E AKA A++ V
Sbjct: 80  LADTAIRGEDLDEARALEAKRKAEEHMSSSHGDVDYAQASAELAKAIAKLRV 131


>gi|325291353|ref|YP_004267534.1| ATP synthase F1 subcomplex subunit epsilon [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324966754|gb|ADY57533.1| ATP synthase F1 subcomplex epsilon subunit [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 136

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 5/120 (4%)

Query: 23  FTL--ASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           FTL   S N   + N  V+ + VP   G  GILPNH P +A L  GVI + +  G   ++
Sbjct: 5   FTLNVVSPNGAIF-NDEVEFLVVPGEDGELGILPNHSPLMATLNIGVIRITQN-GKVNRM 62

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
            +S G + V  +  V ++AE A   D++D   A+    +A+  L+S S+E     A++A+
Sbjct: 63  ALSGGFMEVGGN-KVTLLAESAELADTIDIVRAKAAKERAEQRLASKSAEIDMVRAELAL 121


>gi|374299941|ref|YP_005051580.1| ATP synthase subunit epsilon [Desulfovibrio africanus str. Walvis
           Bay]
 gi|332552877|gb|EGJ49921.1| ATP synthase epsilon chain [Desulfovibrio africanus str. Walvis
           Bay]
          Length = 142

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 2/106 (1%)

Query: 36  QNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSV 95
           + V  V  P   G FG+LPNH+P L+ L  G +  Y+  G +  +F++ G   V  D  V
Sbjct: 19  EKVDYVGAPGIVGEFGVLPNHIPFLSALGIGNL-YYKLGGKTHYVFIAGGFAEVGPD-RV 76

Query: 96  QIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVE 141
            ++AE A     +D   AR    +A+S L   + +   A AQ +++
Sbjct: 77  TVLAEIAERAAEIDVERARKARERAESRLQKRAEDVNFARAQASLQ 122


>gi|16080733|ref|NP_391561.1| ATP synthase F0F1 subunit epsilon [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221311640|ref|ZP_03593487.1| F0F1 ATP synthase subunit epsilon [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221315968|ref|ZP_03597773.1| F0F1 ATP synthase subunit epsilon [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221320879|ref|ZP_03602173.1| F0F1 ATP synthase subunit epsilon [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221325164|ref|ZP_03606458.1| F0F1 ATP synthase subunit epsilon [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|402777844|ref|YP_006631788.1| F0F1 ATP synthase subunit epsilon [Bacillus subtilis QB928]
 gi|418031091|ref|ZP_12669576.1| F0F1 ATP synthase subunit epsilon [Bacillus subtilis subsp.
           subtilis str. SC-8]
 gi|452913466|ref|ZP_21962094.1| ATP synthase F1, epsilon subunit [Bacillus subtilis MB73/2]
 gi|584813|sp|P37812.1|ATPE_BACSU RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|433992|emb|CAA82261.1| ATP synthase subunit epsilon [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|2636205|emb|CAB15697.1| ATP synthase (subunit epsilon, F1 subunit) [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|351472150|gb|EHA32263.1| F0F1 ATP synthase subunit epsilon [Bacillus subtilis subsp.
           subtilis str. SC-8]
 gi|402483023|gb|AFQ59532.1| ATP synthase (subunit epsilon, F1 subunit) [Bacillus subtilis
           QB928]
 gi|407962523|dbj|BAM55763.1| ATP synthase F0F1 subunit epsilon [Bacillus subtilis BEST7613]
 gi|407966536|dbj|BAM59775.1| ATP synthase F0F1 subunit epsilon [Bacillus subtilis BEST7003]
 gi|452118494|gb|EME08888.1| ATP synthase F1, epsilon subunit [Bacillus subtilis MB73/2]
          Length = 132

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 61/107 (57%), Gaps = 2/107 (1%)

Query: 37  NVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQ 96
           +++ V V + SG  GILP H+PT+A LK G + + + +G ++ + VS G + V  D  V 
Sbjct: 19  DIEMVSVRAESGDLGILPGHIPTVAPLKIGAVRL-KKDGQTEMVAVSGGFVEVRPD-HVT 76

Query: 97  IIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
           I+A+ A   + +D   A     +AQ  L+S S +T    A++A++ A
Sbjct: 77  ILAQAAETAEGIDKERAEAARQRAQERLNSQSDDTDIRRAELALQRA 123


>gi|317497733|ref|ZP_07956047.1| ATP synthase F1 [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316894983|gb|EFV17151.1| ATP synthase F1 [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 134

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 67/125 (53%), Gaps = 2/125 (1%)

Query: 19  DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQ 78
           + M   + +  + FYT  +V  V++ +  G  GI   H+P   I+ PGV+T+ E +G  +
Sbjct: 4   NTMKLEVITPERSFYTG-DVTFVELNTTEGEVGIYARHIPMTMIIAPGVLTITEEDGTKK 62

Query: 79  KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 138
           K  +  G + V  ++++ I+AE A   + +D   A+    +A+  L + S++   A A++
Sbjct: 63  KAALLKGFVEVT-ETTMSILAEVAEWPEDIDVERAKKAEERARKRLEAKSADIDIARAEL 121

Query: 139 AVEVA 143
           A++ A
Sbjct: 122 ALKRA 126


>gi|254503990|ref|ZP_05116141.1| ATP synthase F1, epsilon subunit [Labrenzia alexandrii DFL-11]
 gi|222440061|gb|EEE46740.1| ATP synthase F1, epsilon subunit [Labrenzia alexandrii DFL-11]
          Length = 127

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 5/117 (4%)

Query: 35  NQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSS 94
           ++ V +V VP   G FG+L NH P ++ +KPG++ V    G   + FV  G   +     
Sbjct: 10  SEQVAEVVVPGTEGEFGVLKNHSPFMSTIKPGILKVRTDAGSWDEYFVRGGFADIA-PGG 68

Query: 95  VQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV----EVAEALK 147
           + ++AE+A PV  +        +  A+ +++ A  +  K +A++ +    +VAEALK
Sbjct: 69  LTVLAEQAIPVSEISEDQLAQAIKNAEEDVADAKDDDTKQKAEMTLSQLKDVAEALK 125


>gi|82546108|ref|YP_410055.1| F0F1 ATP synthase subunit epsilon [Shigella boydii Sb227]
 gi|187732621|ref|YP_001882432.1| F0F1 ATP synthase subunit epsilon [Shigella boydii CDC 3083-94]
 gi|416295169|ref|ZP_11651090.1| ATP synthase epsilon chain [Shigella flexneri CDC 796-83]
 gi|417684472|ref|ZP_12333812.1| ATP synthase F1, epsilon subunit [Shigella boydii 3594-74]
 gi|420327923|ref|ZP_14829661.1| ATP synthase F1, epsilon subunit [Shigella flexneri CCH060]
 gi|420338489|ref|ZP_14840043.1| ATP synthase F1, epsilon subunit [Shigella flexneri K-315]
 gi|421684911|ref|ZP_16124691.1| ATP synthase F1, epsilon subunit [Shigella flexneri 1485-80]
 gi|119367784|sp|Q31UN1.1|ATPE_SHIBS RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|226740288|sp|B2TUP4.1|ATPE_SHIB3 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|81247519|gb|ABB68227.1| membrane-bound ATP synthase, F1 sector, epsilon-subunit [Shigella
           boydii Sb227]
 gi|187429613|gb|ACD08887.1| ATP synthase F1, epsilon subunit [Shigella boydii CDC 3083-94]
 gi|320186286|gb|EFW61022.1| ATP synthase epsilon chain [Shigella flexneri CDC 796-83]
 gi|332089494|gb|EGI94598.1| ATP synthase F1, epsilon subunit [Shigella boydii 3594-74]
 gi|391245588|gb|EIQ04855.1| ATP synthase F1, epsilon subunit [Shigella flexneri CCH060]
 gi|391257804|gb|EIQ16912.1| ATP synthase F1, epsilon subunit [Shigella flexneri K-315]
 gi|404335304|gb|EJZ61775.1| ATP synthase F1, epsilon subunit [Shigella flexneri 1485-80]
          Length = 139

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 21  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQ-SGNVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  +SS         AS+E AKA AQ+ V
Sbjct: 80  LADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELAKAIAQLRV 131


>gi|456351998|dbj|BAM86443.1| F0F1 ATP synthase epsilon subunit [Agromonas oligotrophica S58]
          Length = 135

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 3/90 (3%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F L S  K+ ++ + V QVDVP   G FG+L  H P +A L+PG++TV  + G  QKI V
Sbjct: 6   FDLVSPEKIAFSGE-VDQVDVPGQEGDFGVLAGHAPFVATLRPGILTVT-SGGSQQKIIV 63

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASA 112
             G   ++ D  + ++A+ A  +  LD +A
Sbjct: 64  LGGLAEIS-DKGLTVLADVATSLKDLDQTA 92


>gi|418055485|ref|ZP_12693540.1| ATP synthase epsilon chain [Hyphomicrobium denitrificans 1NES1]
 gi|353211067|gb|EHB76468.1| ATP synthase epsilon chain [Hyphomicrobium denitrificans 1NES1]
          Length = 132

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 3/96 (3%)

Query: 17  YADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGV 76
            A    F L S  +V  +  +  QV VP   G F +L  H P +A L+PGV+ V    G 
Sbjct: 1   MAGTFKFELVSPERVLLS-IDADQVVVPGSDGEFAVLAGHAPVIATLRPGVLDVT-AGGS 58

Query: 77  SQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASA 112
            +++FV SG   V D S + ++AE+AH V+ + +SA
Sbjct: 59  KRRLFVKSGFAEV-DPSRLTVLAEKAHDVEEMSSSA 93


>gi|114798087|ref|YP_760592.1| ATP synthase F1 subunit epsilon [Hyphomonas neptunium ATCC 15444]
 gi|119367737|sp|Q0C101.1|ATPE_HYPNA RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|114738261|gb|ABI76386.1| ATP synthase F1, epsilon subunit [Hyphomonas neptunium ATCC 15444]
          Length = 135

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 9/127 (7%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           AD++ F+L S  +  ++ Q V  V  P   G FG+L NH P +  LK GV+ V E + V 
Sbjct: 2   ADKLHFSLVSPARELFSGQ-VDHVIAPGTEGEFGVLVNHAPFMTTLKNGVVRVLEGDVVR 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAAR-DVLSKAQS----ELSSASSETA 132
            + +V  G   V   + + I+AEEA  +   DASA   DV  +A      EL +  ++ A
Sbjct: 61  HRFYVRGGFADVT-PAGLTILAEEARNLS--DASAQEIDVEVEAAKLKLLELDAGDTKRA 117

Query: 133 KAEAQIA 139
             E QI+
Sbjct: 118 VLEHQIS 124


>gi|416270111|ref|ZP_11642701.1| ATP synthase epsilon chain [Shigella dysenteriae CDC 74-1112]
 gi|420382855|ref|ZP_14882282.1| ATP synthase F1, epsilon subunit [Shigella dysenteriae 225-75]
 gi|320174621|gb|EFW49757.1| ATP synthase epsilon chain [Shigella dysenteriae CDC 74-1112]
 gi|391297891|gb|EIQ55924.1| ATP synthase F1, epsilon subunit [Shigella dysenteriae 225-75]
          Length = 137

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 19  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQ-SGNVTV 77

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  +SS         AS+E AKA AQ+ V
Sbjct: 78  LADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELAKAIAQLRV 129


>gi|226326988|ref|ZP_03802506.1| hypothetical protein PROPEN_00848 [Proteus penneri ATCC 35198]
 gi|225204825|gb|EEG87179.1| ATP synthase F1, epsilon subunit [Proteus penneri ATCC 35198]
          Length = 138

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 11/127 (8%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
             + S  K  Y  + VK++ V    G  GI P H P L  +KPG++ V +T G  + I++
Sbjct: 8   LKVVSAEKQLYDGE-VKRIQVTGSEGELGIYPQHTPLLTAIKPGMVRVVKTSGEEEVIYL 66

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAK 133
           S G + V   + V ++A+ A     LD + A +   KA+  + S         AS+E AK
Sbjct: 67  SGGILEVQ-PTGVIVLADTAIRGRDLDEAKALESKRKAEEHIQSSHGDVDYAQASAELAK 125

Query: 134 AEAQIAV 140
           A A++ V
Sbjct: 126 AIAKLRV 132


>gi|167768339|ref|ZP_02440392.1| hypothetical protein CLOSS21_02895 [Clostridium sp. SS2/1]
 gi|167709863|gb|EDS20442.1| ATP synthase F1, epsilon subunit [Clostridium sp. SS2/1]
 gi|291560312|emb|CBL39112.1| ATP synthase F1 subcomplex epsilon subunit [butyrate-producing
           bacterium SSC/2]
          Length = 134

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 67/125 (53%), Gaps = 2/125 (1%)

Query: 19  DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQ 78
           + M   + +  + FYT  +V  V++ +  G  GI   H+P   I+ PGV+T+ E +G  +
Sbjct: 4   NTMKLEVITPERSFYTG-DVTFVELNTTEGEVGIYARHIPMTMIIAPGVLTITEEDGTKK 62

Query: 79  KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 138
           K  +  G + V  ++++ I+AE A   + +D   A+    +A+  L + S++   A A++
Sbjct: 63  KAALLKGFLEVT-ETTMSILAEVAEWPEDIDVERAKKAEERARKRLEAKSADIDIARAEL 121

Query: 139 AVEVA 143
           A++ A
Sbjct: 122 ALKRA 126


>gi|119386526|ref|YP_917581.1| ATP synthase F1 subunit epsilon [Paracoccus denitrificans PD1222]
 gi|189081371|sp|A1B8P1.1|ATPE_PARDP RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|119377121|gb|ABL71885.1| ATP synthase F1 subcomplex epsilon subunit [Paracoccus
           denitrificans PD1222]
          Length = 148

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 2/126 (1%)

Query: 17  YADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGV 76
            AD M F L S  +   +   V++V +P   G    +P H P +  L+PG++TV   +G 
Sbjct: 1   MADTMQFDLVSPERNLVSVP-VREVRLPGADGDLTAMPGHAPAIVNLRPGLVTVVAGDGS 59

Query: 77  SQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEA 136
             +  V+ G   +N++ SV ++AE  HP   +      +++++A+  + +A    +  E 
Sbjct: 60  ETEFAVTGGFAEINNE-SVTLLAERGHPRAEMTQEVFNEMMAQARRRVEAAKERESAGEE 118

Query: 137 QIAVEV 142
            +A  V
Sbjct: 119 LVAAAV 124


>gi|198283039|ref|YP_002219360.1| ATP synthase F1 subunit epsilon [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|198247560|gb|ACH83153.1| ATP synthase F1, epsilon subunit [Acidithiobacillus ferrooxidans
           ATCC 53993]
          Length = 171

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 61/107 (57%), Gaps = 4/107 (3%)

Query: 41  VDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAE 100
           V VP+  G  GILP H P L+ L+PG + + + +G +Q +F+  G + +  D  V I+A+
Sbjct: 26  VAVPAELGEIGILPGHAPLLSGLRPGELRITQPDGQTQILFLEGGMLEIQPD-IVTILAD 84

Query: 101 EAHPVDSLDASAARDVLSKAQSELSS---ASSETAKAEAQIAVEVAE 144
            +  +  ++   +R+ +  AQS L+     + + A+AE ++  EVA+
Sbjct: 85  ASLRISDINIHESRERIKDAQSTLAKRAVPAMDFARAELELQREVAK 131


>gi|338972361|ref|ZP_08627736.1| ATP synthase epsilon chain [Bradyrhizobiaceae bacterium SG-6C]
 gi|414169208|ref|ZP_11425045.1| ATP synthase epsilon chain [Afipia clevelandensis ATCC 49720]
 gi|338234525|gb|EGP09640.1| ATP synthase epsilon chain [Bradyrhizobiaceae bacterium SG-6C]
 gi|410885967|gb|EKS33780.1| ATP synthase epsilon chain [Afipia clevelandensis ATCC 49720]
          Length = 136

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 58/103 (56%), Gaps = 3/103 (2%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F L S  K+ ++ + V+QVD+P   G  G++  H P +A ++PG++TV    G  +KI V
Sbjct: 6   FDLVSPEKIAFSGE-VEQVDIPGVDGDLGVMAGHAPLVATIRPGIMTVT-VGGKHEKIIV 63

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELS 125
             G   ++ D  + ++A+ A  +  LDA A  D +++ + +L 
Sbjct: 64  LGGLAEIS-DKGLTVLADTATSMAELDAVAFADKIAQMEEDLK 105


>gi|398801818|ref|ZP_10561055.1| ATP synthase, F1 epsilon subunit [Pantoea sp. GM01]
 gi|398091254|gb|EJL81703.1| ATP synthase, F1 epsilon subunit [Pantoea sp. GM01]
          Length = 139

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V   S+  +
Sbjct: 21  VQRIQVSGSEGELGIRPGHAPLLTAIKPGMIHIVKQHGEEEYIYLSGGVLEVQPGSTT-V 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A   + LD + A++   KA+  ++S         AS+E AKA A++ V
Sbjct: 80  LADTAIRGEDLDEARAQEAKRKAEEHMNSSHGDVDYAQASAELAKAIAKLRV 131


>gi|425285611|ref|ZP_18676624.1| ATP synthase F1, epsilon subunit [Escherichia coli TW00353]
 gi|408198016|gb|EKI23262.1| ATP synthase F1, epsilon subunit [Escherichia coli TW00353]
          Length = 137

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 19  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQ-PGNVTV 77

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  +SS         AS+E AKA AQ+ V
Sbjct: 78  LADTAIRGQDLDEARAMEAKRKAEEHISSSHADVDYAQASAELAKAIAQLRV 129


>gi|330815047|ref|YP_004358752.1| ATP synthase subunit epsilon [Burkholderia gladioli BSR3]
 gi|327367440|gb|AEA58796.1| ATP synthase subunit epsilon [Burkholderia gladioli BSR3]
          Length = 141

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 60/108 (55%), Gaps = 3/108 (2%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  SG  GILP H P +  ++PG + +    G  + +FV+ G + V    +V ++
Sbjct: 21  KFVALPGESGELGILPGHTPLITRIRPGAVRIESEGGQDEFVFVAGGILEVQ-PGAVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASSET--AKAEAQIAVEVAE 144
           A+ A     LDA+ A +   +A+  L +A S+   AKA++++A  +A+
Sbjct: 80  ADTAIRGRDLDAAKAEEAKRRAEETLQNAKSDIDLAKAQSELATAMAQ 127


>gi|95929970|ref|ZP_01312710.1| ATP synthase F1, epsilon subunit [Desulfuromonas acetoxidans DSM
           684]
 gi|95133939|gb|EAT15598.1| ATP synthase F1, epsilon subunit [Desulfuromonas acetoxidans DSM
           684]
          Length = 137

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 2/96 (2%)

Query: 35  NQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSS 94
           ++ V ++  P   G  GILP H P L  LK G +T Y   G +  + V+ G + V ++  
Sbjct: 18  SEEVDEIIAPGALGELGILPGHTPLLTTLKVGELT-YRKGGAAFHVAVNWGYVEV-EEGK 75

Query: 95  VQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
           V I+AE A P D +D + A+  L +A+  L     E
Sbjct: 76  VTILAETAEPADEIDLARAKAALGRAEDALKKLDPE 111


>gi|309784442|ref|ZP_07679081.1| ATP synthase F1, epsilon subunit [Shigella dysenteriae 1617]
 gi|419269746|ref|ZP_13812086.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC10C]
 gi|420393876|ref|ZP_14893120.1| ATP synthase F1, epsilon subunit [Escherichia coli EPEC C342-62]
 gi|424118337|ref|ZP_17852157.1| ATP synthase F1, epsilon subunit [Escherichia coli PA3]
 gi|424553239|ref|ZP_17995051.1| ATP synthase F1, epsilon subunit [Escherichia coli EC4439]
 gi|424578049|ref|ZP_18018068.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1845]
 gi|425152699|ref|ZP_18552300.1| ATP synthase F1, epsilon subunit [Escherichia coli 88.0221]
 gi|425195799|ref|ZP_18592555.1| ATP synthase F1, epsilon subunit [Escherichia coli NE1487]
 gi|425395024|ref|ZP_18778118.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1868]
 gi|308927949|gb|EFP73417.1| ATP synthase F1, epsilon subunit [Shigella dysenteriae 1617]
 gi|378106439|gb|EHW68068.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC10C]
 gi|390674143|gb|EIN50347.1| ATP synthase F1, epsilon subunit [Escherichia coli PA3]
 gi|390875158|gb|EIP36238.1| ATP synthase F1, epsilon subunit [Escherichia coli EC4439]
 gi|390915862|gb|EIP74360.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1845]
 gi|391309955|gb|EIQ67618.1| ATP synthase F1, epsilon subunit [Escherichia coli EPEC C342-62]
 gi|408105972|gb|EKH38104.1| ATP synthase F1, epsilon subunit [Escherichia coli NE1487]
 gi|408303840|gb|EKJ21288.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1868]
 gi|408593525|gb|EKK67835.1| ATP synthase F1, epsilon subunit [Escherichia coli 88.0221]
          Length = 124

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 6   VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQ-PGNVTV 64

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  +SS         AS+E AKA AQ+ V
Sbjct: 65  LADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELAKAIAQLRV 116


>gi|16131599|ref|NP_418187.1| F1 sector of membrane-bound ATP synthase, epsilon subunit
           [Escherichia coli str. K-12 substr. MG1655]
 gi|26250475|ref|NP_756515.1| F0F1 ATP synthase subunit epsilon [Escherichia coli CFT073]
 gi|74314243|ref|YP_312662.1| ATP synthase F0F1 subunit epsilon [Shigella sonnei Ss046]
 gi|82779077|ref|YP_405426.1| ATP synthase F0F1 subunit epsilon [Shigella dysenteriae Sd197]
 gi|91213256|ref|YP_543242.1| ATP synthase F0F1 subunit epsilon [Escherichia coli UTI89]
 gi|110644072|ref|YP_671802.1| ATP synthase F0F1 subunit epsilon [Escherichia coli 536]
 gi|110807555|ref|YP_691075.1| ATP synthase F0F1 subunit epsilon [Shigella flexneri 5 str. 8401]
 gi|157157156|ref|YP_001465222.1| ATP synthase F0F1 subunit epsilon [Escherichia coli E24377A]
 gi|157163213|ref|YP_001460531.1| F0F1 ATP synthase subunit epsilon [Escherichia coli HS]
 gi|170022232|ref|YP_001727186.1| F0F1 ATP synthase subunit epsilon [Escherichia coli ATCC 8739]
 gi|170083232|ref|YP_001732552.1| F0F1 ATP synthase subunit epsilon [Escherichia coli str. K-12
           substr. DH10B]
 gi|170682907|ref|YP_001746061.1| F0F1 ATP synthase subunit epsilon [Escherichia coli SMS-3-5]
 gi|187775713|ref|ZP_02797227.2| ATP synthase F1, epsilon subunit [Escherichia coli O157:H7 str.
           EC4196]
 gi|188024738|ref|ZP_02773561.2| ATP synthase F1, epsilon subunit [Escherichia coli O157:H7 str.
           EC4113]
 gi|188495845|ref|ZP_03003115.1| ATP synthase F1, epsilon subunit [Escherichia coli 53638]
 gi|189010127|ref|ZP_02804973.2| ATP synthase F1, epsilon subunit [Escherichia coli O157:H7 str.
           EC4076]
 gi|189401850|ref|ZP_02778640.2| ATP synthase F1, epsilon subunit [Escherichia coli O157:H7 str.
           EC4401]
 gi|189402777|ref|ZP_02791238.2| ATP synthase F1, epsilon subunit [Escherichia coli O157:H7 str.
           EC4486]
 gi|189404882|ref|ZP_02811581.2| ATP synthase F1, epsilon subunit [Escherichia coli O157:H7 str.
           EC869]
 gi|189405729|ref|ZP_02823786.2| ATP synthase F1, epsilon subunit [Escherichia coli O157:H7 str.
           EC508]
 gi|191165803|ref|ZP_03027641.1| ATP synthase F1, epsilon subunit [Escherichia coli B7A]
 gi|191170513|ref|ZP_03032066.1| ATP synthase F1, epsilon subunit [Escherichia coli F11]
 gi|193063855|ref|ZP_03044942.1| ATP synthase F1, epsilon subunit [Escherichia coli E22]
 gi|193069195|ref|ZP_03050152.1| ATP synthase F1, epsilon subunit [Escherichia coli E110019]
 gi|194428110|ref|ZP_03060654.1| ATP synthase F1, epsilon subunit [Escherichia coli B171]
 gi|194431351|ref|ZP_03063644.1| ATP synthase F1, epsilon subunit [Shigella dysenteriae 1012]
 gi|194435700|ref|ZP_03067803.1| ATP synthase F1, epsilon subunit [Escherichia coli 101-1]
 gi|208807440|ref|ZP_03249777.1| ATP synthase F1, epsilon subunit [Escherichia coli O157:H7 str.
           EC4206]
 gi|208812283|ref|ZP_03253612.1| ATP synthase F1, epsilon subunit [Escherichia coli O157:H7 str.
           EC4045]
 gi|208820751|ref|ZP_03261071.1| ATP synthase F1, epsilon subunit [Escherichia coli O157:H7 str.
           EC4042]
 gi|209399630|ref|YP_002273259.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O157:H7 str.
           EC4115]
 gi|209921212|ref|YP_002295296.1| F0F1 ATP synthase subunit epsilon [Escherichia coli SE11]
 gi|215489069|ref|YP_002331500.1| ATP synthase F0F1 subunit epsilon [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218551265|ref|YP_002385057.1| F0F1 ATP synthase subunit epsilon [Escherichia fergusonii ATCC
           35469]
 gi|218556302|ref|YP_002389216.1| F0F1 ATP synthase subunit epsilon [Escherichia coli IAI1]
 gi|218560806|ref|YP_002393719.1| F0F1 ATP synthase subunit epsilon [Escherichia coli S88]
 gi|218692019|ref|YP_002400231.1| F0F1 ATP synthase subunit epsilon [Escherichia coli ED1a]
 gi|218697457|ref|YP_002405124.1| ATP synthase F0F1 subunit epsilon [Escherichia coli 55989]
 gi|218702581|ref|YP_002410210.1| F0F1 ATP synthase subunit epsilon [Escherichia coli IAI39]
 gi|218707377|ref|YP_002414896.1| F0F1 ATP synthase subunit epsilon [Escherichia coli UMN026]
 gi|222158439|ref|YP_002558578.1| ATP synthase epsilon chain [Escherichia coli LF82]
 gi|227883953|ref|ZP_04001758.1| F1 sector of membrane-bound ATP synthase, epsilon subunit
           [Escherichia coli 83972]
 gi|237703532|ref|ZP_04534013.1| predicted protein [Escherichia sp. 3_2_53FAA]
 gi|238902822|ref|YP_002928618.1| F0F1 ATP synthase subunit epsilon [Escherichia coli BW2952]
 gi|251786996|ref|YP_003001300.1| ATP synthase, F1 complex, epsilon subunit, subunit of ATP synthase,
           F1 complex and ATP synthase [Escherichia coli BL21(DE3)]
 gi|253775634|ref|YP_003038465.1| F0F1 ATP synthase subunit epsilon [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254163683|ref|YP_003046791.1| F0F1 ATP synthase subunit epsilon [Escherichia coli B str. REL606]
 gi|254290433|ref|YP_003056181.1| F0F1 ATP synthase subunit epsilon [Escherichia coli BL21(DE3)]
 gi|254795737|ref|YP_003080574.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O157:H7 str.
           TW14359]
 gi|260846484|ref|YP_003224262.1| F1 sector of membrane-bound ATP synthase, epsilon subunit AtpC
           [Escherichia coli O103:H2 str. 12009]
 gi|260857854|ref|YP_003231745.1| ATP synthase F0F1 subunit epsilon [Escherichia coli O26:H11 str.
           11368]
 gi|260870465|ref|YP_003236867.1| F1 sector of membrane-bound ATP synthase subunit epsilon AtpC
           [Escherichia coli O111:H- str. 11128]
 gi|261225888|ref|ZP_05940169.1| F1 sector of membrane-bound ATP synthase, epsilon subunit
           [Escherichia coli O157:H7 str. FRIK2000]
 gi|261258933|ref|ZP_05951466.1| F1 sector of membrane-bound ATP synthase, epsilon subunit AtpC
           [Escherichia coli O157:H7 str. FRIK966]
 gi|291285155|ref|YP_003501973.1| ATP synthase subunit epsilon [Escherichia coli O55:H7 str. CB9615]
 gi|293407368|ref|ZP_06651290.1| atpC [Escherichia coli FVEC1412]
 gi|293413181|ref|ZP_06655847.1| ATP synthase F1 [Escherichia coli B354]
 gi|293417204|ref|ZP_06659831.1| ATP synthase F1 [Escherichia coli B185]
 gi|293464057|ref|ZP_06664471.1| ATP synthase F1 [Escherichia coli B088]
 gi|298383110|ref|ZP_06992705.1| ATP synthase subunit epsilon [Escherichia coli FVEC1302]
 gi|300815014|ref|ZP_07095239.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 107-1]
 gi|300824559|ref|ZP_07104669.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 119-7]
 gi|300896060|ref|ZP_07114619.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 198-1]
 gi|300902987|ref|ZP_07120930.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 84-1]
 gi|300916400|ref|ZP_07133140.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 115-1]
 gi|300925561|ref|ZP_07141434.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 182-1]
 gi|300940917|ref|ZP_07155443.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 21-1]
 gi|300950647|ref|ZP_07164542.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 116-1]
 gi|300958739|ref|ZP_07170856.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 175-1]
 gi|300983827|ref|ZP_07176769.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 200-1]
 gi|300984355|ref|ZP_07176961.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 45-1]
 gi|301019811|ref|ZP_07183954.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 196-1]
 gi|301020869|ref|ZP_07184928.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 69-1]
 gi|301047554|ref|ZP_07194626.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 185-1]
 gi|301305620|ref|ZP_07211710.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 124-1]
 gi|301324968|ref|ZP_07218523.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 78-1]
 gi|301644407|ref|ZP_07244406.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 146-1]
 gi|307313197|ref|ZP_07592822.1| ATP synthase F1, epsilon subunit [Escherichia coli W]
 gi|309795712|ref|ZP_07690127.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 145-7]
 gi|312967859|ref|ZP_07782071.1| ATP synthase F1, epsilon subunit [Escherichia coli 2362-75]
 gi|312971977|ref|ZP_07786151.1| ATP synthase F1, epsilon subunit [Escherichia coli 1827-70]
 gi|331644458|ref|ZP_08345587.1| ATP synthase F1, epsilon subunit [Escherichia coli H736]
 gi|331649557|ref|ZP_08350643.1| ATP synthase F1, epsilon subunit [Escherichia coli M605]
 gi|331655393|ref|ZP_08356392.1| ATP synthase F1, epsilon subunit [Escherichia coli M718]
 gi|331660075|ref|ZP_08361013.1| ATP synthase F1, epsilon subunit [Escherichia coli TA206]
 gi|331665385|ref|ZP_08366286.1| ATP synthase F1, epsilon subunit [Escherichia coli TA143]
 gi|331670581|ref|ZP_08371420.1| ATP synthase F1, epsilon subunit [Escherichia coli TA271]
 gi|331679835|ref|ZP_08380505.1| ATP synthase F1, epsilon subunit [Escherichia coli H591]
 gi|331685458|ref|ZP_08386044.1| ATP synthase F1, epsilon subunit [Escherichia coli H299]
 gi|332282474|ref|ZP_08394887.1| predicted protein [Shigella sp. D9]
 gi|366159321|ref|ZP_09459183.1| F0F1 ATP synthase subunit epsilon [Escherichia sp. TW09308]
 gi|378715336|ref|YP_005280229.1| ATP synthase F1 subunit epsilon [Escherichia coli KO11FL]
 gi|383180964|ref|YP_005458969.1| F0F1 ATP synthase subunit epsilon [Shigella sonnei 53G]
 gi|384545342|ref|YP_005729406.1| ATP synthase subunit epsilon [Shigella flexneri 2002017]
 gi|386282593|ref|ZP_10060240.1| ATP synthase epsilon chain [Escherichia sp. 4_1_40B]
 gi|386597723|ref|YP_006094123.1| ATP synthase F1 subunit epsilon [Escherichia coli DH1]
 gi|386601768|ref|YP_006103274.1| ATP synthase F1 subunit epsilon [Escherichia coli IHE3034]
 gi|386611124|ref|YP_006126610.1| F1 sector of membrane-bound ATP synthase, epsilon subunit
           [Escherichia coli W]
 gi|386626633|ref|YP_006146361.1| F1 sector of membrane-bound ATP synthase, epsilon subunit
           [Escherichia coli O7:K1 str. CE10]
 gi|386631676|ref|YP_006151396.1| F0F1 ATP synthase subunit epsilon [Escherichia coli str. 'clone D
           i2']
 gi|386636596|ref|YP_006156315.1| F0F1 ATP synthase subunit epsilon [Escherichia coli str. 'clone D
           i14']
 gi|386707009|ref|YP_006170856.1| ATP synthase subunit epsilon [Escherichia coli P12b]
 gi|387509190|ref|YP_006161446.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O55:H7 str.
           RM12579]
 gi|387609545|ref|YP_006098401.1| ATP synthase subunit epsilon [Escherichia coli 042]
 gi|387614443|ref|YP_006117559.1| ATP synthase subunit epsilon [Escherichia coli ETEC H10407]
 gi|387619036|ref|YP_006122058.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O83:H1 str. NRG
           857C]
 gi|387623392|ref|YP_006131020.1| ATP synthase subunit epsilon [Escherichia coli DH1]
 gi|387831632|ref|YP_003351569.1| ATP synthase epsilon subunit [Escherichia coli SE15]
 gi|388479506|ref|YP_491698.1| F1 sector of membrane-bound ATP synthase subunit epsilon
           [Escherichia coli str. K-12 substr. W3110]
 gi|404377135|ref|ZP_10982275.1| ATP synthase epsilon chain [Escherichia sp. 1_1_43]
 gi|407466746|ref|YP_006786812.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O104:H4 str.
           2009EL-2071]
 gi|407484529|ref|YP_006781679.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O104:H4 str.
           2011C-3493]
 gi|410485075|ref|YP_006772621.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O104:H4 str.
           2009EL-2050]
 gi|414578598|ref|ZP_11435761.1| ATP synthase F1, epsilon subunit [Shigella sonnei 3233-85]
 gi|415773901|ref|ZP_11486448.1| ATP synthase F1, epsilon subunit [Escherichia coli 3431]
 gi|415785898|ref|ZP_11493249.1| ATP synthase F1, epsilon subunit [Escherichia coli EPECa14]
 gi|415799829|ref|ZP_11499041.1| ATP synthase F1, epsilon subunit [Escherichia coli E128010]
 gi|415821790|ref|ZP_11510571.1| ATP synthase F1, epsilon subunit [Escherichia coli OK1180]
 gi|415838489|ref|ZP_11520460.1| ATP synthase F1, epsilon subunit [Escherichia coli RN587/1]
 gi|415847970|ref|ZP_11526084.1| ATP synthase F1, epsilon subunit [Shigella sonnei 53G]
 gi|415864775|ref|ZP_11537747.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 85-1]
 gi|415873421|ref|ZP_11540676.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 79-10]
 gi|416328570|ref|ZP_11668239.1| ATP synthase epsilon chain [Escherichia coli O157:H7 str. 1125]
 gi|416341986|ref|ZP_11676352.1| ATP synthase epsilon chain [Escherichia coli EC4100B]
 gi|416801769|ref|ZP_11885801.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O157:H- str. H
           2687]
 gi|416833396|ref|ZP_11900334.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O157:H7 str.
           LSU-61]
 gi|416900272|ref|ZP_11929583.1| ATP synthase F1, epsilon subunit [Escherichia coli STEC_7v]
 gi|417087631|ref|ZP_11954559.1| F1 sector of membrane-bound ATP synthase, epsilon subunit
           [Escherichia coli cloneA_i1]
 gi|417117535|ref|ZP_11968396.1| ATP synthase F1, epsilon subunit [Escherichia coli 1.2741]
 gi|417125601|ref|ZP_11973562.1| ATP synthase F1, epsilon subunit [Escherichia coli 97.0246]
 gi|417133133|ref|ZP_11977918.1| ATP synthase F1, epsilon subunit [Escherichia coli 5.0588]
 gi|417142276|ref|ZP_11984851.1| ATP synthase F1, epsilon subunit [Escherichia coli 97.0259]
 gi|417149344|ref|ZP_11989435.1| ATP synthase F1, epsilon subunit [Escherichia coli 1.2264]
 gi|417157944|ref|ZP_11995568.1| ATP synthase F1, epsilon subunit [Escherichia coli 96.0497]
 gi|417169104|ref|ZP_12001359.1| ATP synthase F1, epsilon subunit [Escherichia coli 99.0741]
 gi|417173495|ref|ZP_12003291.1| ATP synthase F1, epsilon subunit [Escherichia coli 3.2608]
 gi|417185552|ref|ZP_12010953.1| ATP synthase F1, epsilon subunit [Escherichia coli 93.0624]
 gi|417201730|ref|ZP_12017980.1| ATP synthase F1, epsilon subunit [Escherichia coli 4.0522]
 gi|417209873|ref|ZP_12020975.1| ATP synthase F1, epsilon subunit [Escherichia coli JB1-95]
 gi|417220895|ref|ZP_12024335.1| ATP synthase F1, epsilon subunit [Escherichia coli 96.154]
 gi|417229176|ref|ZP_12030934.1| ATP synthase F1, epsilon subunit [Escherichia coli 5.0959]
 gi|417245857|ref|ZP_12039353.1| ATP synthase F1, epsilon subunit [Escherichia coli 9.0111]
 gi|417249446|ref|ZP_12041230.1| ATP synthase F1, epsilon subunit [Escherichia coli 4.0967]
 gi|417265134|ref|ZP_12052513.1| ATP synthase F1, epsilon subunit [Escherichia coli 2.3916]
 gi|417269086|ref|ZP_12056446.1| ATP synthase F1, epsilon subunit [Escherichia coli 3.3884]
 gi|417273373|ref|ZP_12060720.1| ATP synthase F1, epsilon subunit [Escherichia coli 2.4168]
 gi|417279170|ref|ZP_12066480.1| ATP synthase F1, epsilon subunit [Escherichia coli 3.2303]
 gi|417281165|ref|ZP_12068465.1| ATP synthase F1, epsilon subunit [Escherichia coli 3003]
 gi|417285772|ref|ZP_12073063.1| ATP synthase F1, epsilon subunit [Escherichia coli TW07793]
 gi|417293860|ref|ZP_12081139.1| ATP synthase F1, epsilon subunit [Escherichia coli B41]
 gi|417297260|ref|ZP_12084507.1| ATP synthase F1, epsilon subunit [Escherichia coli 900105 (10e)]
 gi|417310320|ref|ZP_12097135.1| hypothetical protein PPECC33_37070 [Escherichia coli PCN033]
 gi|417583361|ref|ZP_12234160.1| ATP synthase F1, epsilon subunit [Escherichia coli STEC_B2F1]
 gi|417594208|ref|ZP_12244894.1| ATP synthase F1, epsilon subunit [Escherichia coli 2534-86]
 gi|417599176|ref|ZP_12249800.1| ATP synthase F1, epsilon subunit [Escherichia coli 3030-1]
 gi|417610494|ref|ZP_12260985.1| ATP synthase F1, epsilon subunit [Escherichia coli STEC_DG131-3]
 gi|417615399|ref|ZP_12265848.1| ATP synthase F1, epsilon subunit [Escherichia coli STEC_EH250]
 gi|417620412|ref|ZP_12270813.1| ATP synthase F1, epsilon subunit [Escherichia coli G58-1]
 gi|417625853|ref|ZP_12276143.1| ATP synthase F1, epsilon subunit [Escherichia coli STEC_H.1.8]
 gi|417636690|ref|ZP_12286897.1| ATP synthase F1, epsilon subunit [Escherichia coli STEC_S1191]
 gi|417641759|ref|ZP_12291883.1| ATP synthase F1, epsilon subunit [Escherichia coli TX1999]
 gi|417664370|ref|ZP_12313949.1| ATP synthase epsilon chain [Escherichia coli AA86]
 gi|417669325|ref|ZP_12318862.1| ATP synthase F1, epsilon subunit [Escherichia coli STEC_O31]
 gi|417675047|ref|ZP_12324475.1| ATP synthase F1, epsilon subunit [Shigella dysenteriae 155-74]
 gi|417704980|ref|ZP_12354073.1| ATP synthase F1, epsilon subunit [Shigella flexneri K-218]
 gi|417709752|ref|ZP_12358766.1| ATP synthase F1, epsilon subunit [Shigella flexneri VA-6]
 gi|417714711|ref|ZP_12363662.1| ATP synthase F1, epsilon subunit [Shigella flexneri K-272]
 gi|417719702|ref|ZP_12368582.1| ATP synthase F1, epsilon subunit [Shigella flexneri K-227]
 gi|417725433|ref|ZP_12374217.1| ATP synthase F1, epsilon subunit [Shigella flexneri K-304]
 gi|417730678|ref|ZP_12379361.1| ATP synthase F1, epsilon subunit [Shigella flexneri K-671]
 gi|417735877|ref|ZP_12384513.1| ATP synthase F1, epsilon subunit [Shigella flexneri 2747-71]
 gi|417740703|ref|ZP_12389269.1| ATP synthase F1, epsilon subunit [Shigella flexneri 4343-70]
 gi|417745613|ref|ZP_12394130.1| ATP synthase F1, epsilon subunit [Shigella flexneri 2930-71]
 gi|417758167|ref|ZP_12406228.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC2B]
 gi|417807422|ref|ZP_12454351.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O104:H4 str.
           LB226692]
 gi|417830171|ref|ZP_12476709.1| ATP synthase F1, epsilon subunit [Shigella flexneri J1713]
 gi|417835162|ref|ZP_12481601.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O104:H4 str.
           01-09591]
 gi|417866364|ref|ZP_12511406.1| hypothetical protein C22711_3294 [Escherichia coli O104:H4 str.
           C227-11]
 gi|417947236|ref|ZP_12590432.1| F0F1 ATP synthase subunit epsilon [Escherichia coli XH140A]
 gi|418040362|ref|ZP_12678606.1| ATP synthase F1, epsilon subunit [Escherichia coli W26]
 gi|418259493|ref|ZP_12882341.1| ATP synthase F1, epsilon subunit [Shigella flexneri 6603-63]
 gi|418269690|ref|ZP_12887959.1| ATP synthase F1, epsilon subunit [Shigella sonnei str. Moseley]
 gi|418942943|ref|ZP_13496180.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O157:H43 str.
           T22]
 gi|418955858|ref|ZP_13507791.1| ATP synthase F1, epsilon subunit [Escherichia coli J53]
 gi|418999234|ref|ZP_13546811.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC1A]
 gi|419004547|ref|ZP_13552055.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC1B]
 gi|419026308|ref|ZP_13573521.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC2A]
 gi|419031457|ref|ZP_13578597.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC2C]
 gi|419042156|ref|ZP_13589171.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC2E]
 gi|419083059|ref|ZP_13628501.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC4A]
 gi|419094822|ref|ZP_13640097.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC4C]
 gi|419117302|ref|ZP_13662310.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC5A]
 gi|419144849|ref|ZP_13689576.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC6A]
 gi|419150694|ref|ZP_13695341.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC6B]
 gi|419156255|ref|ZP_13700810.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC6C]
 gi|419166669|ref|ZP_13711118.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC6E]
 gi|419172700|ref|ZP_13716572.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC7A]
 gi|419177427|ref|ZP_13721234.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC7B]
 gi|419183262|ref|ZP_13726868.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC7C]
 gi|419188843|ref|ZP_13732347.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC7D]
 gi|419193810|ref|ZP_13737251.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC7E]
 gi|419199523|ref|ZP_13742811.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC8A]
 gi|419205916|ref|ZP_13749070.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC8B]
 gi|419212259|ref|ZP_13755322.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC8C]
 gi|419229351|ref|ZP_13772185.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC9A]
 gi|419234876|ref|ZP_13777640.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC9B]
 gi|419240215|ref|ZP_13782917.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC9C]
 gi|419245837|ref|ZP_13788467.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC9D]
 gi|419251577|ref|ZP_13794141.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC9E]
 gi|419257466|ref|ZP_13799962.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC10A]
 gi|419280512|ref|ZP_13822749.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC10E]
 gi|419286693|ref|ZP_13828851.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC10F]
 gi|419291955|ref|ZP_13834038.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC11A]
 gi|419297235|ref|ZP_13839270.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC11B]
 gi|419302828|ref|ZP_13844819.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC11C]
 gi|419308771|ref|ZP_13850660.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC11D]
 gi|419357454|ref|ZP_13898700.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC13C]
 gi|419362428|ref|ZP_13903634.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC13D]
 gi|419367490|ref|ZP_13908639.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC13E]
 gi|419372531|ref|ZP_13913635.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC14A]
 gi|419383257|ref|ZP_13924198.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC14C]
 gi|419388502|ref|ZP_13929367.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC14D]
 gi|419393932|ref|ZP_13934728.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC15A]
 gi|419399140|ref|ZP_13939900.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC15B]
 gi|419404385|ref|ZP_13945102.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC15C]
 gi|419409549|ref|ZP_13950231.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC15D]
 gi|419415107|ref|ZP_13955739.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC15E]
 gi|419702580|ref|ZP_14230172.1| F0F1 ATP synthase subunit epsilon [Escherichia coli SCI-07]
 gi|419804194|ref|ZP_14329356.1| ATP synthase F1, epsilon subunit [Escherichia coli AI27]
 gi|419810811|ref|ZP_14335690.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O32:H37 str.
           P4]
 gi|419865828|ref|ZP_14388204.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O103:H25 str.
           CVM9340]
 gi|419872433|ref|ZP_14394470.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O103:H2 str.
           CVM9450]
 gi|419874506|ref|ZP_14396431.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O111:H11 str.
           CVM9534]
 gi|419881800|ref|ZP_14403098.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O111:H11 str.
           CVM9545]
 gi|419891779|ref|ZP_14411821.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O111:H8 str.
           CVM9570]
 gi|419897489|ref|ZP_14417074.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O111:H8 str.
           CVM9574]
 gi|419899372|ref|ZP_14418886.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O26:H11 str.
           CVM9942]
 gi|419910994|ref|ZP_14429499.1| hypothetical protein ECO10026_26398 [Escherichia coli O26:H11 str.
           CVM10026]
 gi|419926383|ref|ZP_14444157.1| F0F1 ATP synthase subunit epsilon [Escherichia coli 541-15]
 gi|420091334|ref|ZP_14603084.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O111:H8 str.
           CVM9602]
 gi|420097888|ref|ZP_14609177.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O111:H8 str.
           CVM9634]
 gi|420106597|ref|ZP_14616996.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O111:H11 str.
           CVM9553]
 gi|420112557|ref|ZP_14622355.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O26:H11 str.
           CVM10021]
 gi|420124334|ref|ZP_14633193.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O26:H11 str.
           CVM10030]
 gi|420125207|ref|ZP_14634031.1| ATP synthase epsilon subunit [Escherichia coli O26:H11 str.
           CVM10224]
 gi|420135558|ref|ZP_14643641.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O26:H11 str.
           CVM9952]
 gi|420277871|ref|ZP_14780150.1| ATP synthase F1, epsilon subunit [Escherichia coli PA40]
 gi|420300842|ref|ZP_14802885.1| ATP synthase F1, epsilon subunit [Escherichia coli TW09109]
 gi|420306707|ref|ZP_14808693.1| ATP synthase F1, epsilon subunit [Escherichia coli TW10119]
 gi|420312022|ref|ZP_14813948.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1738]
 gi|420317827|ref|ZP_14819696.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1734]
 gi|420322732|ref|ZP_14824550.1| ATP synthase F1, epsilon subunit [Shigella flexneri 2850-71]
 gi|420333652|ref|ZP_14835287.1| ATP synthase F1, epsilon subunit [Shigella flexneri K-1770]
 gi|420344094|ref|ZP_14845554.1| ATP synthase F1, epsilon subunit [Shigella flexneri K-404]
 gi|420349762|ref|ZP_14851133.1| ATP synthase F1, epsilon subunit [Shigella boydii 965-58]
 gi|420361140|ref|ZP_14862085.1| ATP synthase F1, epsilon subunit [Shigella sonnei 3226-85]
 gi|420365685|ref|ZP_14866545.1| ATP synthase F1, epsilon subunit [Shigella sonnei 4822-66]
 gi|420376777|ref|ZP_14876486.1| ATP synthase F1, epsilon subunit [Shigella flexneri 1235-66]
 gi|420388098|ref|ZP_14887429.1| ATP synthase F1, epsilon subunit [Escherichia coli EPECa12]
 gi|421777099|ref|ZP_16213698.1| ATP synthase F1, epsilon subunit [Escherichia coli AD30]
 gi|421814793|ref|ZP_16250493.1| ATP synthase F1, epsilon subunit [Escherichia coli 8.0416]
 gi|422335074|ref|ZP_16416076.1| ATP synthase epsilon chain [Escherichia coli 4_1_47FAA]
 gi|422353549|ref|ZP_16434300.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 117-3]
 gi|422360660|ref|ZP_16441289.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 110-3]
 gi|422364449|ref|ZP_16444967.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 153-1]
 gi|422371368|ref|ZP_16451749.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 16-3]
 gi|422375926|ref|ZP_16456184.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 60-1]
 gi|422380765|ref|ZP_16460939.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 57-2]
 gi|422768482|ref|ZP_16822206.1| ATP synthase F1 [Escherichia coli E1520]
 gi|422773626|ref|ZP_16827309.1| ATP synthase F1 [Escherichia coli E482]
 gi|422778322|ref|ZP_16831972.1| ATP synthase F1 [Escherichia coli H120]
 gi|422788600|ref|ZP_16841336.1| ATP synthase F1 [Escherichia coli H489]
 gi|422792344|ref|ZP_16845045.1| ATP synthase F1 [Escherichia coli TA007]
 gi|422807785|ref|ZP_16856214.1| ATP synthase F1 [Escherichia fergusonii B253]
 gi|422818898|ref|ZP_16867110.1| ATP synthase epsilon chain [Escherichia coli M919]
 gi|422831131|ref|ZP_16879280.1| ATP synthase subunit epsilon [Escherichia coli B093]
 gi|422836060|ref|ZP_16884110.1| ATP synthase subunit epsilon [Escherichia coli E101]
 gi|422841778|ref|ZP_16889747.1| ATP synthase subunit epsilon [Escherichia coli H397]
 gi|422961829|ref|ZP_16972565.1| ATP synthase epsilon chain [Escherichia coli H494]
 gi|422976793|ref|ZP_16977171.1| ATP synthase epsilon chain [Escherichia coli TA124]
 gi|422990007|ref|ZP_16980779.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. C227-11]
 gi|422996905|ref|ZP_16987667.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. C236-11]
 gi|423001998|ref|ZP_16992751.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 09-7901]
 gi|423005655|ref|ZP_16996400.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 04-8351]
 gi|423012216|ref|ZP_17002948.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-3677]
 gi|423021442|ref|ZP_17012149.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-4404]
 gi|423026604|ref|ZP_17017299.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-4522]
 gi|423032432|ref|ZP_17023118.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-4623]
 gi|423035305|ref|ZP_17025983.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-4632
           C1]
 gi|423040427|ref|ZP_17031096.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-4632
           C2]
 gi|423047112|ref|ZP_17037771.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-4632
           C3]
 gi|423055651|ref|ZP_17044457.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-4632
           C4]
 gi|423057654|ref|ZP_17046453.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-4632
           C5]
 gi|423703264|ref|ZP_17677696.1| ATP synthase epsilon chain [Escherichia coli H730]
 gi|423708049|ref|ZP_17682429.1| ATP synthase epsilon chain [Escherichia coli B799]
 gi|424086465|ref|ZP_17822938.1| ATP synthase F1, epsilon subunit [Escherichia coli FDA517]
 gi|424092880|ref|ZP_17828788.1| ATP synthase F1, epsilon subunit [Escherichia coli FRIK1996]
 gi|424099570|ref|ZP_17834809.1| ATP synthase F1, epsilon subunit [Escherichia coli FRIK1985]
 gi|424105762|ref|ZP_17840478.1| ATP synthase F1, epsilon subunit [Escherichia coli FRIK1990]
 gi|424130699|ref|ZP_17863588.1| ATP synthase F1, epsilon subunit [Escherichia coli PA9]
 gi|424257061|ref|ZP_17892261.1| ATP synthase F1, epsilon subunit [Escherichia coli PA25]
 gi|424335985|ref|ZP_17898196.1| ATP synthase F1, epsilon subunit [Escherichia coli PA28]
 gi|424464965|ref|ZP_17915275.1| ATP synthase F1, epsilon subunit [Escherichia coli PA39]
 gi|424483472|ref|ZP_17932439.1| ATP synthase F1, epsilon subunit [Escherichia coli TW07945]
 gi|424489668|ref|ZP_17938191.1| ATP synthase F1, epsilon subunit [Escherichia coli TW09098]
 gi|424516657|ref|ZP_17961229.1| ATP synthase F1, epsilon subunit [Escherichia coli TW14313]
 gi|424522793|ref|ZP_17966883.1| ATP synthase F1, epsilon subunit [Escherichia coli TW14301]
 gi|424540862|ref|ZP_17983791.1| ATP synthase F1, epsilon subunit [Escherichia coli EC4013]
 gi|424547041|ref|ZP_17989359.1| ATP synthase F1, epsilon subunit [Escherichia coli EC4402]
 gi|424565764|ref|ZP_18006751.1| ATP synthase F1, epsilon subunit [Escherichia coli EC4437]
 gi|424571888|ref|ZP_18012409.1| ATP synthase F1, epsilon subunit [Escherichia coli EC4448]
 gi|424583872|ref|ZP_18023503.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1863]
 gi|424752841|ref|ZP_18180809.1| ATP synthase epsilon subunit [Escherichia coli O26:H11 str.
           CFSAN001629]
 gi|424758823|ref|ZP_18186499.1| ATP synthase epsilon subunit [Escherichia coli O111:H11 str.
           CFSAN001630]
 gi|424770752|ref|ZP_18197940.1| ATP synthase epsilon subunit [Escherichia coli O111:H8 str.
           CFSAN001632]
 gi|424818517|ref|ZP_18243668.1| F1 sector of membrane-bound ATP synthase, epsilon subunit
           [Escherichia fergusonii ECD227]
 gi|424839933|ref|ZP_18264570.1| F0F1 ATP synthase subunit epsilon [Shigella flexneri 5a str. M90T]
 gi|425106619|ref|ZP_18508921.1| ATP synthase F1, epsilon subunit [Escherichia coli 5.2239]
 gi|425117350|ref|ZP_18519127.1| ATP synthase F1, epsilon subunit [Escherichia coli 8.0566]
 gi|425122080|ref|ZP_18523755.1| ATP synthase F1, epsilon subunit [Escherichia coli 8.0569]
 gi|425134319|ref|ZP_18535156.1| ATP synthase F1, epsilon subunit [Escherichia coli 8.2524]
 gi|425146585|ref|ZP_18546563.1| ATP synthase F1, epsilon subunit [Escherichia coli 10.0869]
 gi|425158602|ref|ZP_18557850.1| ATP synthase F1, epsilon subunit [Escherichia coli PA34]
 gi|425182772|ref|ZP_18580454.1| ATP synthase F1, epsilon subunit [Escherichia coli FRIK1999]
 gi|425208652|ref|ZP_18604436.1| ATP synthase F1, epsilon subunit [Escherichia coli FRIK2001]
 gi|425245496|ref|ZP_18638790.1| ATP synthase F1, epsilon subunit [Escherichia coli MA6]
 gi|425257490|ref|ZP_18649973.1| ATP synthase F1, epsilon subunit [Escherichia coli CB7326]
 gi|425275033|ref|ZP_18666413.1| ATP synthase F1, epsilon subunit [Escherichia coli TW15901]
 gi|425290952|ref|ZP_18681761.1| ATP synthase F1, epsilon subunit [Escherichia coli 3006]
 gi|425307546|ref|ZP_18697210.1| ATP synthase F1, epsilon subunit [Escherichia coli N1]
 gi|425313910|ref|ZP_18703063.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1735]
 gi|425319891|ref|ZP_18708654.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1736]
 gi|425326029|ref|ZP_18714342.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1737]
 gi|425338519|ref|ZP_18725844.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1847]
 gi|425344811|ref|ZP_18731687.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1848]
 gi|425350652|ref|ZP_18737098.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1849]
 gi|425375444|ref|ZP_18760069.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1864]
 gi|425382076|ref|ZP_18766059.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1865]
 gi|425401115|ref|ZP_18783806.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1869]
 gi|425407211|ref|ZP_18789417.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1870]
 gi|425424751|ref|ZP_18805899.1| ATP synthase F1, epsilon subunit [Escherichia coli 0.1288]
 gi|427806936|ref|ZP_18974003.1| membrane-bound ATP synthase, F1 sector, epsilon-subunit
           [Escherichia coli chi7122]
 gi|427811525|ref|ZP_18978590.1| membrane-bound ATP synthase, F1 sector, epsilon-subunit
           [Escherichia coli]
 gi|428949587|ref|ZP_19021845.1| ATP synthase F1, epsilon subunit [Escherichia coli 88.1467]
 gi|428968285|ref|ZP_19038976.1| ATP synthase F1, epsilon subunit [Escherichia coli 90.0091]
 gi|428974024|ref|ZP_19044321.1| ATP synthase F1, epsilon subunit [Escherichia coli 90.0039]
 gi|429035225|ref|ZP_19100734.1| ATP synthase F1, epsilon subunit [Escherichia coli 96.0939]
 gi|429058075|ref|ZP_19122321.1| ATP synthase F1, epsilon subunit [Escherichia coli 97.1742]
 gi|429069789|ref|ZP_19133214.1| ATP synthase F1, epsilon subunit [Escherichia coli 99.0672]
 gi|429075568|ref|ZP_19138812.1| ATP synthase F1, epsilon subunit [Escherichia coli 99.0678]
 gi|429721487|ref|ZP_19256402.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str.
           Ec11-9450]
 gi|429773380|ref|ZP_19305395.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-02030]
 gi|429778745|ref|ZP_19310711.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str.
           11-02033-1]
 gi|429782580|ref|ZP_19314505.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-02092]
 gi|429787973|ref|ZP_19319860.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-02093]
 gi|429793792|ref|ZP_19325634.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-02281]
 gi|429800372|ref|ZP_19332161.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-02318]
 gi|429803984|ref|ZP_19335741.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-02913]
 gi|429808632|ref|ZP_19340348.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-03439]
 gi|429814331|ref|ZP_19346002.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-04080]
 gi|429819534|ref|ZP_19351164.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-03943]
 gi|429905854|ref|ZP_19371830.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str.
           Ec11-9990]
 gi|429909987|ref|ZP_19375949.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str.
           Ec11-9941]
 gi|429915887|ref|ZP_19381833.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str.
           Ec11-4984]
 gi|429920935|ref|ZP_19386862.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str.
           Ec11-5604]
 gi|429926743|ref|ZP_19392654.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str.
           Ec11-4986]
 gi|429930675|ref|ZP_19396574.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str.
           Ec11-4987]
 gi|429937217|ref|ZP_19403102.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str.
           Ec11-4988]
 gi|429942895|ref|ZP_19408767.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str.
           Ec11-5603]
 gi|429945574|ref|ZP_19411434.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str.
           Ec11-6006]
 gi|429953137|ref|ZP_19418982.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str.
           Ec12-0465]
 gi|429956484|ref|ZP_19422314.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str.
           Ec12-0466]
 gi|432355779|ref|ZP_19599040.1| ATP synthase epsilon chain [Escherichia coli KTE2]
 gi|432360196|ref|ZP_19603408.1| ATP synthase epsilon chain [Escherichia coli KTE4]
 gi|432364996|ref|ZP_19608150.1| ATP synthase epsilon chain [Escherichia coli KTE5]
 gi|432367217|ref|ZP_19610331.1| ATP synthase epsilon chain [Escherichia coli KTE10]
 gi|432374313|ref|ZP_19617344.1| ATP synthase epsilon chain [Escherichia coli KTE11]
 gi|432378974|ref|ZP_19621955.1| ATP synthase epsilon chain [Escherichia coli KTE12]
 gi|432383639|ref|ZP_19626564.1| ATP synthase epsilon chain [Escherichia coli KTE15]
 gi|432389547|ref|ZP_19632426.1| ATP synthase epsilon chain [Escherichia coli KTE16]
 gi|432394411|ref|ZP_19637229.1| ATP synthase epsilon chain [Escherichia coli KTE21]
 gi|432399689|ref|ZP_19642462.1| ATP synthase epsilon chain [Escherichia coli KTE25]
 gi|432404144|ref|ZP_19646887.1| ATP synthase epsilon chain [Escherichia coli KTE26]
 gi|432408812|ref|ZP_19651514.1| ATP synthase epsilon chain [Escherichia coli KTE28]
 gi|432414007|ref|ZP_19656660.1| ATP synthase epsilon chain [Escherichia coli KTE39]
 gi|432419265|ref|ZP_19661855.1| ATP synthase epsilon chain [Escherichia coli KTE44]
 gi|432424147|ref|ZP_19666684.1| ATP synthase epsilon chain [Escherichia coli KTE178]
 gi|432428412|ref|ZP_19670892.1| ATP synthase epsilon chain [Escherichia coli KTE181]
 gi|432433967|ref|ZP_19676390.1| ATP synthase epsilon chain [Escherichia coli KTE187]
 gi|432438699|ref|ZP_19681076.1| ATP synthase epsilon chain [Escherichia coli KTE188]
 gi|432443274|ref|ZP_19685607.1| ATP synthase epsilon chain [Escherichia coli KTE189]
 gi|432448419|ref|ZP_19690714.1| ATP synthase epsilon chain [Escherichia coli KTE191]
 gi|432452004|ref|ZP_19694258.1| ATP synthase epsilon chain [Escherichia coli KTE193]
 gi|432458885|ref|ZP_19701059.1| ATP synthase epsilon chain [Escherichia coli KTE201]
 gi|432463111|ref|ZP_19705242.1| ATP synthase epsilon chain [Escherichia coli KTE204]
 gi|432468076|ref|ZP_19710153.1| ATP synthase epsilon chain [Escherichia coli KTE205]
 gi|432473096|ref|ZP_19715132.1| ATP synthase epsilon chain [Escherichia coli KTE206]
 gi|432478108|ref|ZP_19720093.1| ATP synthase epsilon chain [Escherichia coli KTE208]
 gi|432483157|ref|ZP_19725104.1| ATP synthase epsilon chain [Escherichia coli KTE210]
 gi|432487499|ref|ZP_19729405.1| ATP synthase epsilon chain [Escherichia coli KTE212]
 gi|432491572|ref|ZP_19733431.1| ATP synthase epsilon chain [Escherichia coli KTE213]
 gi|432497879|ref|ZP_19739670.1| ATP synthase epsilon chain [Escherichia coli KTE214]
 gi|432502298|ref|ZP_19744048.1| ATP synthase epsilon chain [Escherichia coli KTE216]
 gi|432506635|ref|ZP_19748353.1| ATP synthase epsilon chain [Escherichia coli KTE220]
 gi|432516131|ref|ZP_19753346.1| ATP synthase epsilon chain [Escherichia coli KTE224]
 gi|432519960|ref|ZP_19757139.1| ATP synthase epsilon chain [Escherichia coli KTE228]
 gi|432526216|ref|ZP_19763328.1| ATP synthase epsilon chain [Escherichia coli KTE230]
 gi|432528602|ref|ZP_19765672.1| ATP synthase epsilon chain [Escherichia coli KTE233]
 gi|432540129|ref|ZP_19777019.1| ATP synthase epsilon chain [Escherichia coli KTE235]
 gi|432545577|ref|ZP_19782400.1| ATP synthase epsilon chain [Escherichia coli KTE236]
 gi|432551056|ref|ZP_19787805.1| ATP synthase epsilon chain [Escherichia coli KTE237]
 gi|432555824|ref|ZP_19792541.1| ATP synthase epsilon chain [Escherichia coli KTE47]
 gi|432561009|ref|ZP_19797662.1| ATP synthase epsilon chain [Escherichia coli KTE49]
 gi|432566122|ref|ZP_19802678.1| ATP synthase epsilon chain [Escherichia coli KTE51]
 gi|432571017|ref|ZP_19807522.1| ATP synthase epsilon chain [Escherichia coli KTE53]
 gi|432575985|ref|ZP_19812454.1| ATP synthase epsilon chain [Escherichia coli KTE55]
 gi|432578012|ref|ZP_19814458.1| ATP synthase epsilon chain [Escherichia coli KTE56]
 gi|432585270|ref|ZP_19821661.1| ATP synthase epsilon chain [Escherichia coli KTE57]
 gi|432590196|ref|ZP_19826547.1| ATP synthase epsilon chain [Escherichia coli KTE58]
 gi|432594956|ref|ZP_19831267.1| ATP synthase epsilon chain [Escherichia coli KTE60]
 gi|432599999|ref|ZP_19836268.1| ATP synthase epsilon chain [Escherichia coli KTE62]
 gi|432604578|ref|ZP_19840805.1| ATP synthase epsilon chain [Escherichia coli KTE66]
 gi|432605181|ref|ZP_19841390.1| ATP synthase epsilon chain [Escherichia coli KTE67]
 gi|432613745|ref|ZP_19849902.1| ATP synthase epsilon chain [Escherichia coli KTE72]
 gi|432619057|ref|ZP_19855154.1| ATP synthase epsilon chain [Escherichia coli KTE75]
 gi|432624113|ref|ZP_19860125.1| ATP synthase epsilon chain [Escherichia coli KTE76]
 gi|432629365|ref|ZP_19865330.1| ATP synthase epsilon chain [Escherichia coli KTE77]
 gi|432633692|ref|ZP_19869609.1| ATP synthase epsilon chain [Escherichia coli KTE80]
 gi|432638962|ref|ZP_19874825.1| ATP synthase epsilon chain [Escherichia coli KTE81]
 gi|432643344|ref|ZP_19879165.1| ATP synthase epsilon chain [Escherichia coli KTE83]
 gi|432648413|ref|ZP_19884198.1| ATP synthase epsilon chain [Escherichia coli KTE86]
 gi|432653398|ref|ZP_19889134.1| ATP synthase epsilon chain [Escherichia coli KTE87]
 gi|432657979|ref|ZP_19893675.1| ATP synthase epsilon chain [Escherichia coli KTE93]
 gi|432662991|ref|ZP_19898619.1| ATP synthase epsilon chain [Escherichia coli KTE111]
 gi|432668339|ref|ZP_19903908.1| ATP synthase epsilon chain [Escherichia coli KTE116]
 gi|432672836|ref|ZP_19908354.1| ATP synthase epsilon chain [Escherichia coli KTE119]
 gi|432676912|ref|ZP_19912353.1| ATP synthase epsilon chain [Escherichia coli KTE142]
 gi|432682521|ref|ZP_19917875.1| ATP synthase epsilon chain [Escherichia coli KTE143]
 gi|432687573|ref|ZP_19922861.1| ATP synthase epsilon chain [Escherichia coli KTE156]
 gi|432689070|ref|ZP_19924336.1| ATP synthase epsilon chain [Escherichia coli KTE161]
 gi|432696608|ref|ZP_19931799.1| ATP synthase epsilon chain [Escherichia coli KTE162]
 gi|432701257|ref|ZP_19936401.1| ATP synthase epsilon chain [Escherichia coli KTE169]
 gi|432706475|ref|ZP_19941569.1| ATP synthase epsilon chain [Escherichia coli KTE171]
 gi|432708138|ref|ZP_19943212.1| ATP synthase epsilon chain [Escherichia coli KTE6]
 gi|432715602|ref|ZP_19950626.1| ATP synthase epsilon chain [Escherichia coli KTE8]
 gi|432720896|ref|ZP_19955853.1| ATP synthase epsilon chain [Escherichia coli KTE9]
 gi|432725207|ref|ZP_19960120.1| ATP synthase epsilon chain [Escherichia coli KTE17]
 gi|432729815|ref|ZP_19964688.1| ATP synthase epsilon chain [Escherichia coli KTE18]
 gi|432734497|ref|ZP_19969319.1| ATP synthase epsilon chain [Escherichia coli KTE45]
 gi|432739241|ref|ZP_19973969.1| ATP synthase epsilon chain [Escherichia coli KTE42]
 gi|432743504|ref|ZP_19978218.1| ATP synthase epsilon chain [Escherichia coli KTE23]
 gi|432747717|ref|ZP_19982378.1| ATP synthase epsilon chain [Escherichia coli KTE43]
 gi|432752197|ref|ZP_19986773.1| ATP synthase epsilon chain [Escherichia coli KTE29]
 gi|432756700|ref|ZP_19991243.1| ATP synthase epsilon chain [Escherichia coli KTE22]
 gi|432761582|ref|ZP_19996070.1| ATP synthase epsilon chain [Escherichia coli KTE46]
 gi|432767170|ref|ZP_20001583.1| ATP synthase epsilon chain [Escherichia coli KTE48]
 gi|432768119|ref|ZP_20002508.1| ATP synthase epsilon chain [Escherichia coli KTE50]
 gi|432772519|ref|ZP_20006830.1| ATP synthase epsilon chain [Escherichia coli KTE54]
 gi|432780777|ref|ZP_20014996.1| ATP synthase epsilon chain [Escherichia coli KTE59]
 gi|432785729|ref|ZP_20019905.1| ATP synthase epsilon chain [Escherichia coli KTE63]
 gi|432789769|ref|ZP_20023895.1| ATP synthase epsilon chain [Escherichia coli KTE65]
 gi|432795002|ref|ZP_20029074.1| ATP synthase epsilon chain [Escherichia coli KTE78]
 gi|432796513|ref|ZP_20030547.1| ATP synthase epsilon chain [Escherichia coli KTE79]
 gi|432803977|ref|ZP_20037927.1| ATP synthase epsilon chain [Escherichia coli KTE84]
 gi|432807988|ref|ZP_20041901.1| ATP synthase epsilon chain [Escherichia coli KTE91]
 gi|432811489|ref|ZP_20045345.1| ATP synthase epsilon chain [Escherichia coli KTE101]
 gi|432817532|ref|ZP_20051283.1| ATP synthase epsilon chain [Escherichia coli KTE115]
 gi|432823205|ref|ZP_20056892.1| ATP synthase epsilon chain [Escherichia coli KTE118]
 gi|432824665|ref|ZP_20058328.1| ATP synthase epsilon chain [Escherichia coli KTE123]
 gi|432829359|ref|ZP_20062974.1| ATP synthase epsilon chain [Escherichia coli KTE135]
 gi|432836733|ref|ZP_20070262.1| ATP synthase epsilon chain [Escherichia coli KTE136]
 gi|432841597|ref|ZP_20075052.1| ATP synthase epsilon chain [Escherichia coli KTE140]
 gi|432846872|ref|ZP_20079475.1| ATP synthase epsilon chain [Escherichia coli KTE141]
 gi|432855749|ref|ZP_20083440.1| ATP synthase epsilon chain [Escherichia coli KTE144]
 gi|432866497|ref|ZP_20088958.1| ATP synthase epsilon chain [Escherichia coli KTE146]
 gi|432871496|ref|ZP_20091666.1| ATP synthase epsilon chain [Escherichia coli KTE147]
 gi|432878110|ref|ZP_20095559.1| ATP synthase epsilon chain [Escherichia coli KTE154]
 gi|432889479|ref|ZP_20102816.1| ATP synthase epsilon chain [Escherichia coli KTE158]
 gi|432891300|ref|ZP_20104058.1| ATP synthase epsilon chain [Escherichia coli KTE165]
 gi|432901301|ref|ZP_20111413.1| ATP synthase epsilon chain [Escherichia coli KTE192]
 gi|432907512|ref|ZP_20115949.1| ATP synthase epsilon chain [Escherichia coli KTE194]
 gi|432915414|ref|ZP_20120669.1| ATP synthase epsilon chain [Escherichia coli KTE190]
 gi|432922997|ref|ZP_20125720.1| ATP synthase epsilon chain [Escherichia coli KTE173]
 gi|432929606|ref|ZP_20130656.1| ATP synthase epsilon chain [Escherichia coli KTE175]
 gi|432931463|ref|ZP_20131520.1| ATP synthase epsilon chain [Escherichia coli KTE184]
 gi|432940549|ref|ZP_20138463.1| ATP synthase epsilon chain [Escherichia coli KTE183]
 gi|432950465|ref|ZP_20144737.1| ATP synthase epsilon chain [Escherichia coli KTE196]
 gi|432957697|ref|ZP_20149103.1| ATP synthase epsilon chain [Escherichia coli KTE197]
 gi|432964519|ref|ZP_20153620.1| ATP synthase epsilon chain [Escherichia coli KTE202]
 gi|432965500|ref|ZP_20154423.1| ATP synthase epsilon chain [Escherichia coli KTE203]
 gi|432974015|ref|ZP_20162858.1| ATP synthase epsilon chain [Escherichia coli KTE207]
 gi|432975967|ref|ZP_20164799.1| ATP synthase epsilon chain [Escherichia coli KTE209]
 gi|432983250|ref|ZP_20172017.1| ATP synthase epsilon chain [Escherichia coli KTE211]
 gi|432987588|ref|ZP_20176299.1| ATP synthase epsilon chain [Escherichia coli KTE215]
 gi|432992888|ref|ZP_20181526.1| ATP synthase epsilon chain [Escherichia coli KTE217]
 gi|432997526|ref|ZP_20186106.1| ATP synthase epsilon chain [Escherichia coli KTE218]
 gi|433002122|ref|ZP_20190639.1| ATP synthase epsilon chain [Escherichia coli KTE223]
 gi|433002642|ref|ZP_20191151.1| ATP synthase epsilon chain [Escherichia coli KTE227]
 gi|433009944|ref|ZP_20198355.1| ATP synthase epsilon chain [Escherichia coli KTE229]
 gi|433016062|ref|ZP_20204389.1| ATP synthase epsilon chain [Escherichia coli KTE104]
 gi|433021000|ref|ZP_20209077.1| ATP synthase epsilon chain [Escherichia coli KTE105]
 gi|433025652|ref|ZP_20213619.1| ATP synthase epsilon chain [Escherichia coli KTE106]
 gi|433030685|ref|ZP_20218531.1| ATP synthase epsilon chain [Escherichia coli KTE109]
 gi|433035665|ref|ZP_20223353.1| ATP synthase epsilon chain [Escherichia coli KTE112]
 gi|433040758|ref|ZP_20228344.1| ATP synthase epsilon chain [Escherichia coli KTE113]
 gi|433045276|ref|ZP_20232749.1| ATP synthase epsilon chain [Escherichia coli KTE117]
 gi|433050210|ref|ZP_20237531.1| ATP synthase epsilon chain [Escherichia coli KTE120]
 gi|433055374|ref|ZP_20242527.1| ATP synthase epsilon chain [Escherichia coli KTE122]
 gi|433060267|ref|ZP_20247298.1| ATP synthase epsilon chain [Escherichia coli KTE124]
 gi|433065212|ref|ZP_20252114.1| ATP synthase epsilon chain [Escherichia coli KTE125]
 gi|433070108|ref|ZP_20256871.1| ATP synthase epsilon chain [Escherichia coli KTE128]
 gi|433075022|ref|ZP_20261658.1| ATP synthase epsilon chain [Escherichia coli KTE129]
 gi|433079943|ref|ZP_20266459.1| ATP synthase epsilon chain [Escherichia coli KTE131]
 gi|433084669|ref|ZP_20271114.1| ATP synthase epsilon chain [Escherichia coli KTE133]
 gi|433089470|ref|ZP_20275828.1| ATP synthase epsilon chain [Escherichia coli KTE137]
 gi|433094136|ref|ZP_20280384.1| ATP synthase epsilon chain [Escherichia coli KTE138]
 gi|433098572|ref|ZP_20284738.1| ATP synthase epsilon chain [Escherichia coli KTE139]
 gi|433103340|ref|ZP_20289409.1| ATP synthase epsilon chain [Escherichia coli KTE145]
 gi|433108001|ref|ZP_20293960.1| ATP synthase epsilon chain [Escherichia coli KTE148]
 gi|433113016|ref|ZP_20298864.1| ATP synthase epsilon chain [Escherichia coli KTE150]
 gi|433117674|ref|ZP_20303453.1| ATP synthase epsilon chain [Escherichia coli KTE153]
 gi|433122359|ref|ZP_20308014.1| ATP synthase epsilon chain [Escherichia coli KTE157]
 gi|433127376|ref|ZP_20312917.1| ATP synthase epsilon chain [Escherichia coli KTE160]
 gi|433132322|ref|ZP_20317743.1| ATP synthase epsilon chain [Escherichia coli KTE163]
 gi|433136996|ref|ZP_20322319.1| ATP synthase epsilon chain [Escherichia coli KTE166]
 gi|433141450|ref|ZP_20326687.1| ATP synthase epsilon chain [Escherichia coli KTE167]
 gi|433146379|ref|ZP_20331509.1| ATP synthase epsilon chain [Escherichia coli KTE168]
 gi|433151402|ref|ZP_20336398.1| ATP synthase epsilon chain [Escherichia coli KTE174]
 gi|433155931|ref|ZP_20340857.1| ATP synthase epsilon chain [Escherichia coli KTE176]
 gi|433160901|ref|ZP_20345715.1| ATP synthase epsilon chain [Escherichia coli KTE177]
 gi|433165760|ref|ZP_20350485.1| ATP synthase epsilon chain [Escherichia coli KTE179]
 gi|433170756|ref|ZP_20355372.1| ATP synthase epsilon chain [Escherichia coli KTE180]
 gi|433175634|ref|ZP_20360137.1| ATP synthase epsilon chain [Escherichia coli KTE232]
 gi|433180618|ref|ZP_20364990.1| ATP synthase epsilon chain [Escherichia coli KTE82]
 gi|433185481|ref|ZP_20369715.1| ATP synthase epsilon chain [Escherichia coli KTE85]
 gi|433190548|ref|ZP_20374634.1| ATP synthase epsilon chain [Escherichia coli KTE88]
 gi|433195797|ref|ZP_20379765.1| ATP synthase epsilon chain [Escherichia coli KTE90]
 gi|433200508|ref|ZP_20384389.1| ATP synthase epsilon chain [Escherichia coli KTE94]
 gi|433205491|ref|ZP_20389234.1| ATP synthase epsilon chain [Escherichia coli KTE95]
 gi|433209892|ref|ZP_20393555.1| ATP synthase epsilon chain [Escherichia coli KTE97]
 gi|433214771|ref|ZP_20398345.1| ATP synthase epsilon chain [Escherichia coli KTE99]
 gi|433321649|ref|ZP_20399207.1| F0F1 ATP synthase subunit epsilon [Escherichia coli J96]
 gi|442595581|ref|ZP_21013427.1| ATP synthase epsilon chain [Escherichia coli O10:K5(L):H4 str. ATCC
           23506]
 gi|442596164|ref|ZP_21013984.1| ATP synthase epsilon chain [Escherichia coli O5:K4(L):H4 str. ATCC
           23502]
 gi|442605781|ref|ZP_21020597.1| ATP synthase epsilon chain [Escherichia coli Nissle 1917]
 gi|443619814|ref|YP_007383670.1| F0F1 ATP synthase subunit epsilon [Escherichia coli APEC O78]
 gi|444949607|ref|ZP_21267889.1| ATP synthase F1, epsilon subunit [Escherichia coli 99.0839]
 gi|444955299|ref|ZP_21273356.1| ATP synthase F1, epsilon subunit [Escherichia coli 99.0848]
 gi|444971921|ref|ZP_21289252.1| ATP synthase F1, epsilon subunit [Escherichia coli 99.1793]
 gi|444977212|ref|ZP_21294282.1| ATP synthase F1, epsilon subunit [Escherichia coli 99.1805]
 gi|444982557|ref|ZP_21299454.1| ATP synthase F1, epsilon subunit [Escherichia coli ATCC 700728]
 gi|444993279|ref|ZP_21309911.1| ATP synthase F1, epsilon subunit [Escherichia coli PA19]
 gi|445025848|ref|ZP_21341662.1| ATP synthase F1, epsilon subunit [Escherichia coli 7.1982]
 gi|445036727|ref|ZP_21352245.1| ATP synthase F1, epsilon subunit [Escherichia coli 99.1762]
 gi|445042400|ref|ZP_21357763.1| ATP synthase F1, epsilon subunit [Escherichia coli PA35]
 gi|450195457|ref|ZP_21892526.1| ATP synthase epsilon subunit [Escherichia coli SEPT362]
 gi|450225721|ref|ZP_21897456.1| ATP synthase epsilon subunit [Escherichia coli O08]
 gi|450252723|ref|ZP_21902214.1| ATP synthase epsilon subunit [Escherichia coli S17]
 gi|452967300|ref|ZP_21965527.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O157:H7 str.
           EC4009]
 gi|67462174|sp|P0A6E6.2|ATPE_ECOLI RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|67462175|sp|P0A6E7.2|ATPE_ECOL6 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|67462176|sp|P0A6E8.2|ATPE_SHIFL RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|119361430|sp|Q0TAX8.1|ATPE_ECOL5 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|119361431|sp|Q1R4K3.1|ATPE_ECOUT RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|119367785|sp|Q329S0.1|ATPE_SHIDS RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|119367786|sp|Q3YVN5.1|ATPE_SHISS RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|123342309|sp|Q0SYU5.1|ATPE_SHIF8 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|166990381|sp|A7ZTU3.1|ATPE_ECO24 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|166990382|sp|A8A6J4.1|ATPE_ECOHS RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|189081363|sp|B1IX07.1|ATPE_ECOLC RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|226740247|sp|B7MGF1.1|ATPE_ECO45 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|226740248|sp|B5YXD5.1|ATPE_ECO5E RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|226740249|sp|B7NR33.1|ATPE_ECO7I RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|226740250|sp|B7M587.1|ATPE_ECO8A RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|226740251|sp|B1X9V9.1|ATPE_ECODH RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|226740252|sp|B7NF47.1|ATPE_ECOLU RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|226740253|sp|B6I3W8.1|ATPE_ECOSE RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|226740254|sp|B1LL58.1|ATPE_ECOSM RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|226740256|sp|B7LK76.1|ATPE_ESCF3 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|254809363|sp|B7UMJ6.1|ATPE_ECO27 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|254809364|sp|B7L881.1|ATPE_ECO55 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|254809365|sp|B7N2H0.1|ATPE_ECO81 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|259585482|sp|C4ZZ09.1|ATPE_ECOBW RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|26110905|gb|AAN83089.1|AE016769_204 ATP synthase epsilon chain [Escherichia coli CFT073]
 gi|42278|emb|CAA23595.1| unnamed protein product [Escherichia coli]
 gi|43266|emb|CAA25783.1| unnamed protein product [Escherichia coli]
 gi|146326|gb|AAA83876.1| H+ ATPase F1 epsilon subunit [Escherichia coli]
 gi|148140|gb|AAA24738.1| ATP synthase epsilon subunit [Escherichia coli]
 gi|290580|gb|AAA62083.1| ATP synthase F1 epsilon subunit [Escherichia coli]
 gi|1790169|gb|AAC76754.1| F1 sector of membrane-bound ATP synthase, epsilon subunit
           [Escherichia coli str. K-12 substr. MG1655]
 gi|73857720|gb|AAZ90427.1| membrane-bound ATP synthase, F1 sector, epsilon-subunit [Shigella
           sonnei Ss046]
 gi|81243225|gb|ABB63935.1| membrane-bound ATP synthase, F1 sector, epsilon-subunit [Shigella
           dysenteriae Sd197]
 gi|85676307|dbj|BAE77557.1| F1 sector of membrane-bound ATP synthase, epsilon subunit
           [Escherichia coli str. K12 substr. W3110]
 gi|91074830|gb|ABE09711.1| membrane-bound ATP synthase F1 sector epsilon-subunit [Escherichia
           coli UTI89]
 gi|110345664|gb|ABG71901.1| ATP synthase epsilon chain [Escherichia coli 536]
 gi|110617103|gb|ABF05770.1| membrane-bound ATP synthase, F1 sector, epsilon-subunit [Shigella
           flexneri 5 str. 8401]
 gi|157068893|gb|ABV08148.1| ATP synthase F1, epsilon subunit [Escherichia coli HS]
 gi|157079186|gb|ABV18894.1| ATP synthase F1, epsilon subunit [Escherichia coli E24377A]
 gi|169757160|gb|ACA79859.1| ATP synthase F1, epsilon subunit [Escherichia coli ATCC 8739]
 gi|169891067|gb|ACB04774.1| F1 sector of membrane-bound ATP synthase, epsilon subunit
           [Escherichia coli str. K-12 substr. DH10B]
 gi|170520625|gb|ACB18803.1| ATP synthase F1, epsilon subunit [Escherichia coli SMS-3-5]
 gi|187771798|gb|EDU35642.1| ATP synthase F1, epsilon subunit [Escherichia coli O157:H7 str.
           EC4196]
 gi|188016885|gb|EDU55007.1| ATP synthase F1, epsilon subunit [Escherichia coli O157:H7 str.
           EC4113]
 gi|188491044|gb|EDU66147.1| ATP synthase F1, epsilon subunit [Escherichia coli 53638]
 gi|189002606|gb|EDU71592.1| ATP synthase F1, epsilon subunit [Escherichia coli O157:H7 str.
           EC4076]
 gi|189359102|gb|EDU77521.1| ATP synthase F1, epsilon subunit [Escherichia coli O157:H7 str.
           EC4401]
 gi|189364771|gb|EDU83190.1| ATP synthase F1, epsilon subunit [Escherichia coli O157:H7 str.
           EC4486]
 gi|189373387|gb|EDU91803.1| ATP synthase F1, epsilon subunit [Escherichia coli O157:H7 str.
           EC869]
 gi|189378847|gb|EDU97263.1| ATP synthase F1, epsilon subunit [Escherichia coli O157:H7 str.
           EC508]
 gi|190904127|gb|EDV63838.1| ATP synthase F1, epsilon subunit [Escherichia coli B7A]
 gi|190909321|gb|EDV68907.1| ATP synthase F1, epsilon subunit [Escherichia coli F11]
 gi|192930570|gb|EDV83177.1| ATP synthase F1, epsilon subunit [Escherichia coli E22]
 gi|192957519|gb|EDV87965.1| ATP synthase F1, epsilon subunit [Escherichia coli E110019]
 gi|194413868|gb|EDX30146.1| ATP synthase F1, epsilon subunit [Escherichia coli B171]
 gi|194420806|gb|EDX36882.1| ATP synthase F1, epsilon subunit [Shigella dysenteriae 1012]
 gi|194425243|gb|EDX41227.1| ATP synthase F1, epsilon subunit [Escherichia coli 101-1]
 gi|208727241|gb|EDZ76842.1| ATP synthase F1, epsilon subunit [Escherichia coli O157:H7 str.
           EC4206]
 gi|208733560|gb|EDZ82247.1| ATP synthase F1, epsilon subunit [Escherichia coli O157:H7 str.
           EC4045]
 gi|208740874|gb|EDZ88556.1| ATP synthase F1, epsilon subunit [Escherichia coli O157:H7 str.
           EC4042]
 gi|209161030|gb|ACI38463.1| ATP synthase F1, epsilon subunit [Escherichia coli O157:H7 str.
           EC4115]
 gi|209753898|gb|ACI75256.1| membrane-bound ATP synthase beta-subunit AtpD [Escherichia coli]
 gi|209753902|gb|ACI75258.1| membrane-bound ATP synthase beta-subunit AtpD [Escherichia coli]
 gi|209753904|gb|ACI75259.1| membrane-bound ATP synthase beta-subunit AtpD [Escherichia coli]
 gi|209753906|gb|ACI75260.1| membrane-bound ATP synthase beta-subunit AtpD [Escherichia coli]
 gi|209914471|dbj|BAG79545.1| ATP synthase epsilon subunit [Escherichia coli SE11]
 gi|215267141|emb|CAS11589.1| F1 sector of membrane-bound ATP synthase, epsilon subunit
           [Escherichia coli O127:H6 str. E2348/69]
 gi|218354189|emb|CAV00816.1| F1 sector of membrane-bound ATP synthase, epsilon subunit
           [Escherichia coli 55989]
 gi|218358807|emb|CAQ91464.1| F1 sector of membrane-bound ATP synthase, epsilon subunit
           [Escherichia fergusonii ATCC 35469]
 gi|218363071|emb|CAR00709.1| F1 sector of membrane-bound ATP synthase, epsilon subunit
           [Escherichia coli IAI1]
 gi|218367575|emb|CAR05359.1| F1 sector of membrane-bound ATP synthase, epsilon subunit
           [Escherichia coli S88]
 gi|218372567|emb|CAR20441.1| F1 sector of membrane-bound ATP synthase, epsilon subunit
           [Escherichia coli IAI39]
 gi|218429583|emb|CAR10541.2| F1 sector of membrane-bound ATP synthase, epsilon subunit
           [Escherichia coli ED1a]
 gi|218434474|emb|CAR15401.1| F1 sector of membrane-bound ATP synthase, epsilon subunit
           [Escherichia coli UMN026]
 gi|222035444|emb|CAP78189.1| ATP synthase epsilon chain [Escherichia coli LF82]
 gi|226838915|gb|EEH70942.1| ATP synthase epsilon chain [Escherichia sp. 1_1_43]
 gi|226902796|gb|EEH89055.1| predicted protein [Escherichia sp. 3_2_53FAA]
 gi|227839231|gb|EEJ49697.1| F1 sector of membrane-bound ATP synthase, epsilon subunit
           [Escherichia coli 83972]
 gi|238861070|gb|ACR63068.1| F1 sector of membrane-bound ATP synthase, epsilon subunit
           [Escherichia coli BW2952]
 gi|242379269|emb|CAQ34076.1| ATP synthase, F1 complex, epsilon subunit, subunit of ATP synthase,
           F1 complex and ATP synthase [Escherichia coli BL21(DE3)]
 gi|253326678|gb|ACT31280.1| ATP synthase F1, epsilon subunit [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253975584|gb|ACT41255.1| F0F1 ATP synthase subunit epsilon [Escherichia coli B str. REL606]
 gi|253979740|gb|ACT45410.1| F0F1 ATP synthase subunit epsilon [Escherichia coli BL21(DE3)]
 gi|254595137|gb|ACT74498.1| F1 sector of membrane-bound ATP synthase, epsilon subunit
           [Escherichia coli O157:H7 str. TW14359]
 gi|257756503|dbj|BAI28005.1| F1 sector of membrane-bound ATP synthase, epsilon subunit AtpC
           [Escherichia coli O26:H11 str. 11368]
 gi|257761631|dbj|BAI33128.1| F1 sector of membrane-bound ATP synthase, epsilon subunit AtpC
           [Escherichia coli O103:H2 str. 12009]
 gi|257766821|dbj|BAI38316.1| F1 sector of membrane-bound ATP synthase, epsilon subunit AtpC
           [Escherichia coli O111:H- str. 11128]
 gi|260451412|gb|ACX41834.1| ATP synthase F1, epsilon subunit [Escherichia coli DH1]
 gi|281180789|dbj|BAI57119.1| ATP synthase epsilon subunit [Escherichia coli SE15]
 gi|281603129|gb|ADA76113.1| ATP synthase epsilon chain [Shigella flexneri 2002017]
 gi|284923845|emb|CBG36944.1| ATP synthase epsilon subunit [Escherichia coli 042]
 gi|290765028|gb|ADD58989.1| ATP synthase epsilon chain [Escherichia coli O55:H7 str. CB9615]
 gi|291321689|gb|EFE61125.1| ATP synthase F1 [Escherichia coli B088]
 gi|291425659|gb|EFE98695.1| atpC [Escherichia coli FVEC1412]
 gi|291431235|gb|EFF04228.1| ATP synthase F1 [Escherichia coli B185]
 gi|291468314|gb|EFF10809.1| ATP synthase F1 [Escherichia coli B354]
 gi|294492355|gb|ADE91111.1| ATP synthase F1, epsilon subunit [Escherichia coli IHE3034]
 gi|298276946|gb|EFI18464.1| ATP synthase subunit epsilon [Escherichia coli FVEC1302]
 gi|299882070|gb|EFI90281.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 196-1]
 gi|300300540|gb|EFJ56925.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 185-1]
 gi|300306856|gb|EFJ61376.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 200-1]
 gi|300314620|gb|EFJ64404.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 175-1]
 gi|300360046|gb|EFJ75916.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 198-1]
 gi|300398394|gb|EFJ81932.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 69-1]
 gi|300404982|gb|EFJ88520.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 84-1]
 gi|300408391|gb|EFJ91929.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 45-1]
 gi|300416304|gb|EFJ99614.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 115-1]
 gi|300418335|gb|EFK01646.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 182-1]
 gi|300450048|gb|EFK13668.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 116-1]
 gi|300454347|gb|EFK17840.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 21-1]
 gi|300522960|gb|EFK44029.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 119-7]
 gi|300531906|gb|EFK52968.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 107-1]
 gi|300839128|gb|EFK66888.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 124-1]
 gi|300848139|gb|EFK75899.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 78-1]
 gi|301077246|gb|EFK92052.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 146-1]
 gi|306906880|gb|EFN37389.1| ATP synthase F1, epsilon subunit [Escherichia coli W]
 gi|308120591|gb|EFO57853.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 145-7]
 gi|309704179|emb|CBJ03526.1| ATP synthase epsilon subunit [Escherichia coli ETEC H10407]
 gi|310334354|gb|EFQ00559.1| ATP synthase F1, epsilon subunit [Escherichia coli 1827-70]
 gi|312287420|gb|EFR15328.1| ATP synthase F1, epsilon subunit [Escherichia coli 2362-75]
 gi|312948297|gb|ADR29124.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O83:H1 str. NRG
           857C]
 gi|315063041|gb|ADT77368.1| F1 sector of membrane-bound ATP synthase, epsilon subunit
           [Escherichia coli W]
 gi|315138316|dbj|BAJ45475.1| ATP synthase subunit epsilon [Escherichia coli DH1]
 gi|315254576|gb|EFU34544.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 85-1]
 gi|315285515|gb|EFU44957.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 110-3]
 gi|315292847|gb|EFU52199.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 153-1]
 gi|315296875|gb|EFU56164.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 16-3]
 gi|315618561|gb|EFU99147.1| ATP synthase F1, epsilon subunit [Escherichia coli 3431]
 gi|320201237|gb|EFW75818.1| ATP synthase epsilon chain [Escherichia coli EC4100B]
 gi|320650165|gb|EFX18661.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O157:H- str. H
           2687]
 gi|320666266|gb|EFX33272.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323155412|gb|EFZ41595.1| ATP synthase F1, epsilon subunit [Escherichia coli EPECa14]
 gi|323161017|gb|EFZ46936.1| ATP synthase F1, epsilon subunit [Escherichia coli E128010]
 gi|323167005|gb|EFZ52744.1| ATP synthase F1, epsilon subunit [Shigella sonnei 53G]
 gi|323177751|gb|EFZ63335.1| ATP synthase F1, epsilon subunit [Escherichia coli OK1180]
 gi|323189536|gb|EFZ74816.1| ATP synthase F1, epsilon subunit [Escherichia coli RN587/1]
 gi|323380897|gb|ADX53165.1| ATP synthase F1, epsilon subunit [Escherichia coli KO11FL]
 gi|323934918|gb|EGB31296.1| ATP synthase F1 [Escherichia coli E1520]
 gi|323939206|gb|EGB35419.1| ATP synthase F1 [Escherichia coli E482]
 gi|323944207|gb|EGB40287.1| ATP synthase F1 [Escherichia coli H120]
 gi|323959797|gb|EGB55447.1| ATP synthase F1 [Escherichia coli H489]
 gi|323971210|gb|EGB66456.1| ATP synthase F1 [Escherichia coli TA007]
 gi|324008031|gb|EGB77250.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 57-2]
 gi|324012763|gb|EGB81982.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 60-1]
 gi|324018471|gb|EGB87690.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 117-3]
 gi|324111630|gb|EGC05611.1| ATP synthase F1 [Escherichia fergusonii B253]
 gi|325499537|gb|EGC97396.1| F1 sector of membrane-bound ATP synthase, epsilon subunit
           [Escherichia fergusonii ECD227]
 gi|326341587|gb|EGD65376.1| ATP synthase epsilon chain [Escherichia coli O157:H7 str. 1125]
 gi|327250883|gb|EGE62585.1| ATP synthase F1, epsilon subunit [Escherichia coli STEC_7v]
 gi|330908044|gb|EGH36563.1| ATP synthase epsilon chain [Escherichia coli AA86]
 gi|331036752|gb|EGI08978.1| ATP synthase F1, epsilon subunit [Escherichia coli H736]
 gi|331042055|gb|EGI14199.1| ATP synthase F1, epsilon subunit [Escherichia coli M605]
 gi|331047408|gb|EGI19486.1| ATP synthase F1, epsilon subunit [Escherichia coli M718]
 gi|331053290|gb|EGI25323.1| ATP synthase F1, epsilon subunit [Escherichia coli TA206]
 gi|331057895|gb|EGI29881.1| ATP synthase F1, epsilon subunit [Escherichia coli TA143]
 gi|331062643|gb|EGI34563.1| ATP synthase F1, epsilon subunit [Escherichia coli TA271]
 gi|331073007|gb|EGI44332.1| ATP synthase F1, epsilon subunit [Escherichia coli H591]
 gi|331077829|gb|EGI49041.1| ATP synthase F1, epsilon subunit [Escherichia coli H299]
 gi|332084731|gb|EGI89917.1| ATP synthase F1, epsilon subunit [Shigella dysenteriae 155-74]
 gi|332104826|gb|EGJ08172.1| predicted protein [Shigella sp. D9]
 gi|332750740|gb|EGJ81148.1| ATP synthase F1, epsilon subunit [Shigella flexneri 4343-70]
 gi|332750906|gb|EGJ81312.1| ATP synthase F1, epsilon subunit [Shigella flexneri K-671]
 gi|332751778|gb|EGJ82176.1| ATP synthase F1, epsilon subunit [Shigella flexneri 2747-71]
 gi|332764012|gb|EGJ94249.1| ATP synthase F1, epsilon subunit [Shigella flexneri 2930-71]
 gi|332995978|gb|EGK15605.1| ATP synthase F1, epsilon subunit [Shigella flexneri VA-6]
 gi|332997504|gb|EGK17120.1| ATP synthase F1, epsilon subunit [Shigella flexneri K-218]
 gi|332998045|gb|EGK17650.1| ATP synthase F1, epsilon subunit [Shigella flexneri K-272]
 gi|333013472|gb|EGK32843.1| ATP synthase F1, epsilon subunit [Shigella flexneri K-304]
 gi|333013705|gb|EGK33070.1| ATP synthase F1, epsilon subunit [Shigella flexneri K-227]
 gi|335573402|gb|EGM59759.1| ATP synthase F1, epsilon subunit [Shigella flexneri J1713]
 gi|338768087|gb|EGP22892.1| hypothetical protein PPECC33_37070 [Escherichia coli PCN033]
 gi|340731742|gb|EGR60881.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O104:H4 str.
           01-09591]
 gi|340737977|gb|EGR72229.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O104:H4 str.
           LB226692]
 gi|341919653|gb|EGT69264.1| hypothetical protein C22711_3294 [Escherichia coli O104:H4 str.
           C227-11]
 gi|342361056|gb|EGU25207.1| F0F1 ATP synthase subunit epsilon [Escherichia coli XH140A]
 gi|342931032|gb|EGU99754.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 79-10]
 gi|345331315|gb|EGW63775.1| ATP synthase F1, epsilon subunit [Escherichia coli 2534-86]
 gi|345334423|gb|EGW66867.1| ATP synthase F1, epsilon subunit [Escherichia coli STEC_B2F1]
 gi|345348672|gb|EGW80965.1| ATP synthase F1, epsilon subunit [Escherichia coli 3030-1]
 gi|345353670|gb|EGW85901.1| ATP synthase F1, epsilon subunit [Escherichia coli STEC_DG131-3]
 gi|345357924|gb|EGW90113.1| ATP synthase F1, epsilon subunit [Escherichia coli STEC_EH250]
 gi|345369629|gb|EGX01611.1| ATP synthase F1, epsilon subunit [Escherichia coli G58-1]
 gi|345373101|gb|EGX05063.1| ATP synthase F1, epsilon subunit [Escherichia coli STEC_H.1.8]
 gi|345384956|gb|EGX14808.1| ATP synthase F1, epsilon subunit [Escherichia coli STEC_S1191]
 gi|345389714|gb|EGX19515.1| ATP synthase F1, epsilon subunit [Escherichia coli TX1999]
 gi|349740369|gb|AEQ15075.1| F1 sector of membrane-bound ATP synthase, epsilon subunit
           [Escherichia coli O7:K1 str. CE10]
 gi|354857522|gb|EHF17976.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. C236-11]
 gi|354861074|gb|EHF21514.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. C227-11]
 gi|354863541|gb|EHF23974.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 04-8351]
 gi|354871577|gb|EHF31975.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 09-7901]
 gi|354876331|gb|EHF36692.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-3677]
 gi|354885458|gb|EHF45756.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-4404]
 gi|354889276|gb|EHF49528.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-4522]
 gi|354892619|gb|EHF52827.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-4623]
 gi|354904696|gb|EHF64786.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-4632
           C1]
 gi|354908484|gb|EHF68539.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-4632
           C2]
 gi|354910385|gb|EHF70412.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-4632
           C3]
 gi|354912474|gb|EHF72474.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-4632
           C4]
 gi|354920645|gb|EHF80578.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-4632
           C5]
 gi|355349731|gb|EHF98934.1| F1 sector of membrane-bound ATP synthase, epsilon subunit
           [Escherichia coli cloneA_i1]
 gi|355422575|gb|AER86772.1| F0F1 ATP synthase subunit epsilon [Escherichia coli str. 'clone D
           i2']
 gi|355427495|gb|AER91691.1| F0F1 ATP synthase subunit epsilon [Escherichia coli str. 'clone D
           i14']
 gi|359333876|dbj|BAL40323.1| F1 sector of membrane-bound ATP synthase, epsilon subunit
           [Escherichia coli str. K-12 substr. MDS42]
 gi|371592571|gb|EHN81468.1| ATP synthase epsilon chain [Escherichia coli H494]
 gi|371593843|gb|EHN82718.1| ATP synthase epsilon chain [Escherichia coli TA124]
 gi|371602871|gb|EHN91557.1| ATP synthase subunit epsilon [Escherichia coli B093]
 gi|371604096|gb|EHN92730.1| ATP synthase subunit epsilon [Escherichia coli H397]
 gi|371610200|gb|EHN98731.1| ATP synthase subunit epsilon [Escherichia coli E101]
 gi|373243862|gb|EHP63358.1| ATP synthase epsilon chain [Escherichia coli 4_1_47FAA]
 gi|374361184|gb|AEZ42891.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O55:H7 str.
           RM12579]
 gi|375320006|gb|EHS66032.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O157:H43 str.
           T22]
 gi|377839282|gb|EHU04380.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC1A]
 gi|377841955|gb|EHU07011.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC1B]
 gi|377858374|gb|EHU23214.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC2A]
 gi|377870475|gb|EHU35159.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC2B]
 gi|377872308|gb|EHU36955.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC2C]
 gi|377886168|gb|EHU50653.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC2E]
 gi|377923218|gb|EHU87186.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC4A]
 gi|377938087|gb|EHV01856.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC4C]
 gi|377957624|gb|EHV21155.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC5A]
 gi|377988975|gb|EHV52145.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC6B]
 gi|377989279|gb|EHV52447.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC6A]
 gi|377993324|gb|EHV56462.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC6C]
 gi|378006893|gb|EHV69866.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC6E]
 gi|378011410|gb|EHV74354.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC7A]
 gi|378021157|gb|EHV83879.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC7C]
 gi|378024863|gb|EHV87516.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC7D]
 gi|378029281|gb|EHV91896.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC7B]
 gi|378035179|gb|EHV97739.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC7E]
 gi|378042989|gb|EHW05429.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC8A]
 gi|378043624|gb|EHW06058.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC8B]
 gi|378049051|gb|EHW11402.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC8C]
 gi|378068232|gb|EHW30335.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC9A]
 gi|378073566|gb|EHW35612.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC9B]
 gi|378079290|gb|EHW41267.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC9C]
 gi|378086974|gb|EHW48844.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC9D]
 gi|378089260|gb|EHW51103.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC9E]
 gi|378096247|gb|EHW58018.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC10A]
 gi|378123614|gb|EHW85031.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC10E]
 gi|378124706|gb|EHW86110.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC10F]
 gi|378125398|gb|EHW86799.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC11A]
 gi|378138562|gb|EHW99816.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC11B]
 gi|378144542|gb|EHX05714.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC11D]
 gi|378146669|gb|EHX07820.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC11C]
 gi|378196162|gb|EHX56652.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC13C]
 gi|378199000|gb|EHX59469.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC13D]
 gi|378210147|gb|EHX70514.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC13E]
 gi|378211996|gb|EHX72323.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC14A]
 gi|378224161|gb|EHX84366.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC14C]
 gi|378228143|gb|EHX88309.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC14D]
 gi|378233589|gb|EHX93675.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC15A]
 gi|378240221|gb|EHY00196.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC15B]
 gi|378243202|gb|EHY03149.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC15C]
 gi|378251518|gb|EHY11416.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC15D]
 gi|378256140|gb|EHY15993.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC15E]
 gi|380346246|gb|EIA34542.1| F0F1 ATP synthase subunit epsilon [Escherichia coli SCI-07]
 gi|383105177|gb|AFG42686.1| ATP synthase epsilon chain [Escherichia coli P12b]
 gi|383468985|gb|EID64006.1| F0F1 ATP synthase subunit epsilon [Shigella flexneri 5a str. M90T]
 gi|383476687|gb|EID68622.1| ATP synthase F1, epsilon subunit [Escherichia coli W26]
 gi|384381249|gb|EIE39108.1| ATP synthase F1, epsilon subunit [Escherichia coli J53]
 gi|384472866|gb|EIE56915.1| ATP synthase F1, epsilon subunit [Escherichia coli AI27]
 gi|385156446|gb|EIF18443.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O32:H37 str.
           P4]
 gi|385537701|gb|EIF84571.1| ATP synthase epsilon chain [Escherichia coli M919]
 gi|385708403|gb|EIG45415.1| ATP synthase epsilon chain [Escherichia coli H730]
 gi|385708962|gb|EIG45964.1| ATP synthase epsilon chain [Escherichia coli B799]
 gi|386120216|gb|EIG68846.1| ATP synthase epsilon chain [Escherichia sp. 4_1_40B]
 gi|386140079|gb|EIG81234.1| ATP synthase F1, epsilon subunit [Escherichia coli 1.2741]
 gi|386145600|gb|EIG92057.1| ATP synthase F1, epsilon subunit [Escherichia coli 97.0246]
 gi|386150987|gb|EIH02276.1| ATP synthase F1, epsilon subunit [Escherichia coli 5.0588]
 gi|386155300|gb|EIH11655.1| ATP synthase F1, epsilon subunit [Escherichia coli 97.0259]
 gi|386161565|gb|EIH23368.1| ATP synthase F1, epsilon subunit [Escherichia coli 1.2264]
 gi|386166694|gb|EIH33214.1| ATP synthase F1, epsilon subunit [Escherichia coli 96.0497]
 gi|386170244|gb|EIH42304.1| ATP synthase F1, epsilon subunit [Escherichia coli 99.0741]
 gi|386176187|gb|EIH53666.1| ATP synthase F1, epsilon subunit [Escherichia coli 3.2608]
 gi|386182852|gb|EIH65608.1| ATP synthase F1, epsilon subunit [Escherichia coli 93.0624]
 gi|386186617|gb|EIH75440.1| ATP synthase F1, epsilon subunit [Escherichia coli 4.0522]
 gi|386195926|gb|EIH90154.1| ATP synthase F1, epsilon subunit [Escherichia coli JB1-95]
 gi|386200697|gb|EIH99687.1| ATP synthase F1, epsilon subunit [Escherichia coli 96.154]
 gi|386208511|gb|EII13016.1| ATP synthase F1, epsilon subunit [Escherichia coli 5.0959]
 gi|386210042|gb|EII20523.1| ATP synthase F1, epsilon subunit [Escherichia coli 9.0111]
 gi|386219767|gb|EII36231.1| ATP synthase F1, epsilon subunit [Escherichia coli 4.0967]
 gi|386221316|gb|EII43760.1| ATP synthase F1, epsilon subunit [Escherichia coli 2.3916]
 gi|386227891|gb|EII55247.1| ATP synthase F1, epsilon subunit [Escherichia coli 3.3884]
 gi|386234550|gb|EII66528.1| ATP synthase F1, epsilon subunit [Escherichia coli 2.4168]
 gi|386237947|gb|EII74887.1| ATP synthase F1, epsilon subunit [Escherichia coli 3.2303]
 gi|386245494|gb|EII87224.1| ATP synthase F1, epsilon subunit [Escherichia coli 3003]
 gi|386251013|gb|EII97180.1| ATP synthase F1, epsilon subunit [Escherichia coli TW07793]
 gi|386252048|gb|EIJ01740.1| ATP synthase F1, epsilon subunit [Escherichia coli B41]
 gi|386260704|gb|EIJ16178.1| ATP synthase F1, epsilon subunit [Escherichia coli 900105 (10e)]
 gi|388334827|gb|EIL01409.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O103:H2 str.
           CVM9450]
 gi|388336759|gb|EIL03287.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O103:H25 str.
           CVM9340]
 gi|388348924|gb|EIL14487.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O111:H8 str.
           CVM9570]
 gi|388350828|gb|EIL16144.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O111:H11 str.
           CVM9534]
 gi|388355246|gb|EIL20103.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O111:H8 str.
           CVM9574]
 gi|388364092|gb|EIL27968.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O111:H11 str.
           CVM9545]
 gi|388370518|gb|EIL34044.1| hypothetical protein ECO10026_26398 [Escherichia coli O26:H11 str.
           CVM10026]
 gi|388380096|gb|EIL42721.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O26:H11 str.
           CVM9942]
 gi|388382847|gb|EIL44666.1| F0F1 ATP synthase subunit epsilon [Escherichia coli 541-15]
 gi|390637379|gb|EIN16929.1| ATP synthase F1, epsilon subunit [Escherichia coli FRIK1996]
 gi|390638724|gb|EIN18224.1| ATP synthase F1, epsilon subunit [Escherichia coli FDA517]
 gi|390655898|gb|EIN33806.1| ATP synthase F1, epsilon subunit [Escherichia coli FRIK1985]
 gi|390659588|gb|EIN37344.1| ATP synthase F1, epsilon subunit [Escherichia coli FRIK1990]
 gi|390680848|gb|EIN56664.1| ATP synthase F1, epsilon subunit [Escherichia coli PA9]
 gi|390718302|gb|EIN91058.1| ATP synthase F1, epsilon subunit [Escherichia coli PA25]
 gi|390724427|gb|EIN96983.1| ATP synthase F1, epsilon subunit [Escherichia coli PA28]
 gi|390756068|gb|EIO25589.1| ATP synthase F1, epsilon subunit [Escherichia coli PA40]
 gi|390758730|gb|EIO28163.1| ATP synthase F1, epsilon subunit [Escherichia coli PA39]
 gi|390786216|gb|EIO53739.1| ATP synthase F1, epsilon subunit [Escherichia coli TW07945]
 gi|390800155|gb|EIO67262.1| ATP synthase F1, epsilon subunit [Escherichia coli TW09098]
 gi|390805213|gb|EIO72161.1| ATP synthase F1, epsilon subunit [Escherichia coli TW09109]
 gi|390813741|gb|EIO80343.1| ATP synthase F1, epsilon subunit [Escherichia coli TW10119]
 gi|390840840|gb|EIP04836.1| ATP synthase F1, epsilon subunit [Escherichia coli TW14313]
 gi|390842914|gb|EIP06745.1| ATP synthase F1, epsilon subunit [Escherichia coli TW14301]
 gi|390862831|gb|EIP25002.1| ATP synthase F1, epsilon subunit [Escherichia coli EC4013]
 gi|390866723|gb|EIP28658.1| ATP synthase F1, epsilon subunit [Escherichia coli EC4402]
 gi|390890292|gb|EIP49969.1| ATP synthase F1, epsilon subunit [Escherichia coli EC4437]
 gi|390891782|gb|EIP51402.1| ATP synthase F1, epsilon subunit [Escherichia coli EC4448]
 gi|390897987|gb|EIP57279.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1738]
 gi|390906141|gb|EIP65055.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1734]
 gi|390915943|gb|EIP74437.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1863]
 gi|391244711|gb|EIQ03990.1| ATP synthase F1, epsilon subunit [Shigella flexneri 2850-71]
 gi|391244808|gb|EIQ04085.1| ATP synthase F1, epsilon subunit [Shigella flexneri K-1770]
 gi|391262152|gb|EIQ21191.1| ATP synthase F1, epsilon subunit [Shigella flexneri K-404]
 gi|391265405|gb|EIQ24377.1| ATP synthase F1, epsilon subunit [Shigella boydii 965-58]
 gi|391277668|gb|EIQ36402.1| ATP synthase F1, epsilon subunit [Shigella sonnei 3226-85]
 gi|391280858|gb|EIQ39520.1| ATP synthase F1, epsilon subunit [Shigella sonnei 3233-85]
 gi|391291720|gb|EIQ50092.1| ATP synthase F1, epsilon subunit [Shigella sonnei 4822-66]
 gi|391300777|gb|EIQ58684.1| ATP synthase F1, epsilon subunit [Shigella flexneri 1235-66]
 gi|391301495|gb|EIQ59381.1| ATP synthase F1, epsilon subunit [Escherichia coli EPECa12]
 gi|394382973|gb|EJE60583.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O111:H8 str.
           CVM9634]
 gi|394383624|gb|EJE61218.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O111:H8 str.
           CVM9602]
 gi|394395525|gb|EJE71953.1| ATP synthase epsilon subunit [Escherichia coli O26:H11 str.
           CVM10224]
 gi|394414421|gb|EJE88366.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O26:H11 str.
           CVM10021]
 gi|394415127|gb|EJE89017.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O26:H11 str.
           CVM10030]
 gi|394415586|gb|EJE89440.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O111:H11 str.
           CVM9553]
 gi|394419933|gb|EJE93502.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O26:H11 str.
           CVM9952]
 gi|397783155|gb|EJK94016.1| ATP synthase F1, epsilon subunit [Escherichia coli STEC_O31]
 gi|397894360|gb|EJL10806.1| ATP synthase F1, epsilon subunit [Shigella flexneri 6603-63]
 gi|397895191|gb|EJL11624.1| ATP synthase F1, epsilon subunit [Shigella sonnei str. Moseley]
 gi|406780237|gb|AFS59661.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O104:H4 str.
           2009EL-2050]
 gi|407056826|gb|AFS76877.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O104:H4 str.
           2011C-3493]
 gi|407062781|gb|AFS83828.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O104:H4 str.
           2009EL-2071]
 gi|408065490|gb|EKG99961.1| ATP synthase F1, epsilon subunit [Escherichia coli PA34]
 gi|408094759|gb|EKH27769.1| ATP synthase F1, epsilon subunit [Escherichia coli FRIK1999]
 gi|408118989|gb|EKH50094.1| ATP synthase F1, epsilon subunit [Escherichia coli FRIK2001]
 gi|408157381|gb|EKH85535.1| ATP synthase F1, epsilon subunit [Escherichia coli MA6]
 gi|408170427|gb|EKH97626.1| ATP synthase F1, epsilon subunit [Escherichia coli CB7326]
 gi|408189776|gb|EKI15475.1| ATP synthase F1, epsilon subunit [Escherichia coli TW15901]
 gi|408208973|gb|EKI33586.1| ATP synthase F1, epsilon subunit [Escherichia coli 3006]
 gi|408223587|gb|EKI47352.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1735]
 gi|408225053|gb|EKI48746.1| ATP synthase F1, epsilon subunit [Escherichia coli N1]
 gi|408235078|gb|EKI58061.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1736]
 gi|408237882|gb|EKI60720.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1737]
 gi|408252013|gb|EKI73719.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1847]
 gi|408256372|gb|EKI77755.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1848]
 gi|408262873|gb|EKI83779.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1849]
 gi|408288736|gb|EKJ07551.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1864]
 gi|408293254|gb|EKJ11708.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1865]
 gi|408316228|gb|EKJ32521.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1869]
 gi|408321491|gb|EKJ37522.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1870]
 gi|408340876|gb|EKJ55356.1| ATP synthase F1, epsilon subunit [Escherichia coli 0.1288]
 gi|408457785|gb|EKJ81577.1| ATP synthase F1, epsilon subunit [Escherichia coli AD30]
 gi|408545225|gb|EKK22664.1| ATP synthase F1, epsilon subunit [Escherichia coli 5.2239]
 gi|408563730|gb|EKK39861.1| ATP synthase F1, epsilon subunit [Escherichia coli 8.0566]
 gi|408564825|gb|EKK40926.1| ATP synthase F1, epsilon subunit [Escherichia coli 8.0569]
 gi|408578661|gb|EKK54171.1| ATP synthase F1, epsilon subunit [Escherichia coli 8.2524]
 gi|408588512|gb|EKK63085.1| ATP synthase F1, epsilon subunit [Escherichia coli 10.0869]
 gi|408599152|gb|EKK73076.1| ATP synthase F1, epsilon subunit [Escherichia coli 8.0416]
 gi|412965118|emb|CCK49048.1| membrane-bound ATP synthase, F1 sector, epsilon-subunit
           [Escherichia coli chi7122]
 gi|412971704|emb|CCJ46367.1| membrane-bound ATP synthase, F1 sector, epsilon-subunit
           [Escherichia coli]
 gi|421936435|gb|EKT94098.1| ATP synthase epsilon subunit [Escherichia coli O26:H11 str.
           CFSAN001629]
 gi|421941918|gb|EKT99290.1| ATP synthase epsilon subunit [Escherichia coli O111:H8 str.
           CFSAN001632]
 gi|421948045|gb|EKU05096.1| ATP synthase epsilon subunit [Escherichia coli O111:H11 str.
           CFSAN001630]
 gi|427204954|gb|EKV75216.1| ATP synthase F1, epsilon subunit [Escherichia coli 88.1467]
 gi|427217855|gb|EKV86905.1| ATP synthase F1, epsilon subunit [Escherichia coli 90.0091]
 gi|427224501|gb|EKV93209.1| ATP synthase F1, epsilon subunit [Escherichia coli 90.0039]
 gi|427280726|gb|EKW45078.1| ATP synthase F1, epsilon subunit [Escherichia coli 96.0939]
 gi|427308026|gb|EKW70443.1| ATP synthase F1, epsilon subunit [Escherichia coli 97.1742]
 gi|427315699|gb|EKW77686.1| ATP synthase F1, epsilon subunit [Escherichia coli 99.0672]
 gi|427325309|gb|EKW86755.1| ATP synthase F1, epsilon subunit [Escherichia coli 99.0678]
 gi|429355905|gb|EKY92589.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-02030]
 gi|429356259|gb|EKY92939.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str.
           11-02033-1]
 gi|429357951|gb|EKY94622.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-02092]
 gi|429371319|gb|EKZ07877.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-02093]
 gi|429373322|gb|EKZ09869.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-02281]
 gi|429376074|gb|EKZ12605.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-02318]
 gi|429387649|gb|EKZ24088.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-02913]
 gi|429390412|gb|EKZ26826.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-03439]
 gi|429390863|gb|EKZ27271.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-03943]
 gi|429401269|gb|EKZ37577.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str. 11-04080]
 gi|429402500|gb|EKZ38791.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str.
           Ec11-9990]
 gi|429404832|gb|EKZ41102.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str.
           Ec11-9450]
 gi|429413728|gb|EKZ49913.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str.
           Ec11-4984]
 gi|429415767|gb|EKZ51926.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str.
           Ec11-4986]
 gi|429424093|gb|EKZ60199.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str.
           Ec11-4987]
 gi|429427624|gb|EKZ63705.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str.
           Ec11-4988]
 gi|429432578|gb|EKZ68617.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str.
           Ec11-5603]
 gi|429439875|gb|EKZ75856.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str.
           Ec11-5604]
 gi|429444042|gb|EKZ79989.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str.
           Ec12-0465]
 gi|429448530|gb|EKZ84443.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str.
           Ec11-6006]
 gi|429454279|gb|EKZ90142.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str.
           Ec12-0466]
 gi|429458658|gb|EKZ94481.1| ATP synthase epsilon chain [Escherichia coli O104:H4 str.
           Ec11-9941]
 gi|430872195|gb|ELB95810.1| ATP synthase epsilon chain [Escherichia coli KTE2]
 gi|430873330|gb|ELB96905.1| ATP synthase epsilon chain [Escherichia coli KTE4]
 gi|430883286|gb|ELC06290.1| ATP synthase epsilon chain [Escherichia coli KTE5]
 gi|430891032|gb|ELC13580.1| ATP synthase epsilon chain [Escherichia coli KTE10]
 gi|430893735|gb|ELC16059.1| ATP synthase epsilon chain [Escherichia coli KTE11]
 gi|430895924|gb|ELC18177.1| ATP synthase epsilon chain [Escherichia coli KTE12]
 gi|430903538|gb|ELC25275.1| ATP synthase epsilon chain [Escherichia coli KTE16]
 gi|430904024|gb|ELC25760.1| ATP synthase epsilon chain [Escherichia coli KTE15]
 gi|430912851|gb|ELC34023.1| ATP synthase epsilon chain [Escherichia coli KTE25]
 gi|430914124|gb|ELC35232.1| ATP synthase epsilon chain [Escherichia coli KTE21]
 gi|430922649|gb|ELC43397.1| ATP synthase epsilon chain [Escherichia coli KTE26]
 gi|430926186|gb|ELC46774.1| ATP synthase epsilon chain [Escherichia coli KTE28]
 gi|430933033|gb|ELC53451.1| ATP synthase epsilon chain [Escherichia coli KTE39]
 gi|430936124|gb|ELC56416.1| ATP synthase epsilon chain [Escherichia coli KTE44]
 gi|430941775|gb|ELC61917.1| ATP synthase epsilon chain [Escherichia coli KTE178]
 gi|430950237|gb|ELC69625.1| ATP synthase epsilon chain [Escherichia coli KTE187]
 gi|430950641|gb|ELC69870.1| ATP synthase epsilon chain [Escherichia coli KTE181]
 gi|430959786|gb|ELC78092.1| ATP synthase epsilon chain [Escherichia coli KTE188]
 gi|430962902|gb|ELC80748.1| ATP synthase epsilon chain [Escherichia coli KTE189]
 gi|430970804|gb|ELC87849.1| ATP synthase epsilon chain [Escherichia coli KTE191]
 gi|430977154|gb|ELC94005.1| ATP synthase epsilon chain [Escherichia coli KTE193]
 gi|430979410|gb|ELC96195.1| ATP synthase epsilon chain [Escherichia coli KTE201]
 gi|430985496|gb|ELD02096.1| ATP synthase epsilon chain [Escherichia coli KTE204]
 gi|430991018|gb|ELD07438.1| ATP synthase epsilon chain [Escherichia coli KTE205]
 gi|430995543|gb|ELD11836.1| ATP synthase epsilon chain [Escherichia coli KTE206]
 gi|431001965|gb|ELD17535.1| ATP synthase epsilon chain [Escherichia coli KTE208]
 gi|431003462|gb|ELD18945.1| ATP synthase epsilon chain [Escherichia coli KTE210]
 gi|431013331|gb|ELD27064.1| ATP synthase epsilon chain [Escherichia coli KTE212]
 gi|431017282|gb|ELD30794.1| ATP synthase epsilon chain [Escherichia coli KTE213]
 gi|431020887|gb|ELD34222.1| ATP synthase epsilon chain [Escherichia coli KTE214]
 gi|431025966|gb|ELD39052.1| ATP synthase epsilon chain [Escherichia coli KTE216]
 gi|431035455|gb|ELD46845.1| ATP synthase epsilon chain [Escherichia coli KTE220]
 gi|431038826|gb|ELD49722.1| ATP synthase epsilon chain [Escherichia coli KTE224]
 gi|431047561|gb|ELD57559.1| ATP synthase epsilon chain [Escherichia coli KTE230]
 gi|431048212|gb|ELD58197.1| ATP synthase epsilon chain [Escherichia coli KTE228]
 gi|431059717|gb|ELD69064.1| ATP synthase epsilon chain [Escherichia coli KTE233]
 gi|431066620|gb|ELD75244.1| ATP synthase epsilon chain [Escherichia coli KTE235]
 gi|431070714|gb|ELD79013.1| ATP synthase epsilon chain [Escherichia coli KTE236]
 gi|431076168|gb|ELD83678.1| ATP synthase epsilon chain [Escherichia coli KTE237]
 gi|431080947|gb|ELD87733.1| ATP synthase epsilon chain [Escherichia coli KTE47]
 gi|431088504|gb|ELD94382.1| ATP synthase epsilon chain [Escherichia coli KTE49]
 gi|431089690|gb|ELD95496.1| ATP synthase epsilon chain [Escherichia coli KTE51]
 gi|431097183|gb|ELE02632.1| ATP synthase epsilon chain [Escherichia coli KTE53]
 gi|431104758|gb|ELE09131.1| ATP synthase epsilon chain [Escherichia coli KTE55]
 gi|431111979|gb|ELE15869.1| ATP synthase epsilon chain [Escherichia coli KTE56]
 gi|431115170|gb|ELE18697.1| ATP synthase epsilon chain [Escherichia coli KTE57]
 gi|431117708|gb|ELE20936.1| ATP synthase epsilon chain [Escherichia coli KTE58]
 gi|431125857|gb|ELE28254.1| ATP synthase epsilon chain [Escherichia coli KTE60]
 gi|431127874|gb|ELE30168.1| ATP synthase epsilon chain [Escherichia coli KTE62]
 gi|431137045|gb|ELE38899.1| ATP synthase epsilon chain [Escherichia coli KTE66]
 gi|431144203|gb|ELE45910.1| ATP synthase epsilon chain [Escherichia coli KTE67]
 gi|431146767|gb|ELE48203.1| ATP synthase epsilon chain [Escherichia coli KTE72]
 gi|431150572|gb|ELE51622.1| ATP synthase epsilon chain [Escherichia coli KTE75]
 gi|431155644|gb|ELE56390.1| ATP synthase epsilon chain [Escherichia coli KTE76]
 gi|431160301|gb|ELE60816.1| ATP synthase epsilon chain [Escherichia coli KTE77]
 gi|431167076|gb|ELE67376.1| ATP synthase epsilon chain [Escherichia coli KTE80]
 gi|431168438|gb|ELE68684.1| ATP synthase epsilon chain [Escherichia coli KTE81]
 gi|431177193|gb|ELE77129.1| ATP synthase epsilon chain [Escherichia coli KTE83]
 gi|431178386|gb|ELE78299.1| ATP synthase epsilon chain [Escherichia coli KTE86]
 gi|431186515|gb|ELE86055.1| ATP synthase epsilon chain [Escherichia coli KTE87]
 gi|431188090|gb|ELE87589.1| ATP synthase epsilon chain [Escherichia coli KTE93]
 gi|431196688|gb|ELE95601.1| ATP synthase epsilon chain [Escherichia coli KTE111]
 gi|431197384|gb|ELE96236.1| ATP synthase epsilon chain [Escherichia coli KTE116]
 gi|431207537|gb|ELF05793.1| ATP synthase epsilon chain [Escherichia coli KTE119]
 gi|431210056|gb|ELF08121.1| ATP synthase epsilon chain [Escherichia coli KTE142]
 gi|431217107|gb|ELF14693.1| ATP synthase epsilon chain [Escherichia coli KTE143]
 gi|431219224|gb|ELF16642.1| ATP synthase epsilon chain [Escherichia coli KTE156]
 gi|431231252|gb|ELF27020.1| ATP synthase epsilon chain [Escherichia coli KTE162]
 gi|431234540|gb|ELF29939.1| ATP synthase epsilon chain [Escherichia coli KTE161]
 gi|431240368|gb|ELF34830.1| ATP synthase epsilon chain [Escherichia coli KTE169]
 gi|431240665|gb|ELF35116.1| ATP synthase epsilon chain [Escherichia coli KTE171]
 gi|431251858|gb|ELF45864.1| ATP synthase epsilon chain [Escherichia coli KTE8]
 gi|431254582|gb|ELF47850.1| ATP synthase epsilon chain [Escherichia coli KTE6]
 gi|431258516|gb|ELF51280.1| ATP synthase epsilon chain [Escherichia coli KTE9]
 gi|431262426|gb|ELF54416.1| ATP synthase epsilon chain [Escherichia coli KTE17]
 gi|431270956|gb|ELF62099.1| ATP synthase epsilon chain [Escherichia coli KTE18]
 gi|431271110|gb|ELF62252.1| ATP synthase epsilon chain [Escherichia coli KTE45]
 gi|431279341|gb|ELF70309.1| ATP synthase epsilon chain [Escherichia coli KTE42]
 gi|431281661|gb|ELF72564.1| ATP synthase epsilon chain [Escherichia coli KTE23]
 gi|431289617|gb|ELF80358.1| ATP synthase epsilon chain [Escherichia coli KTE43]
 gi|431293127|gb|ELF83507.1| ATP synthase epsilon chain [Escherichia coli KTE29]
 gi|431299588|gb|ELF89159.1| ATP synthase epsilon chain [Escherichia coli KTE22]
 gi|431305518|gb|ELF93841.1| ATP synthase epsilon chain [Escherichia coli KTE46]
 gi|431307170|gb|ELF95471.1| ATP synthase epsilon chain [Escherichia coli KTE48]
 gi|431321383|gb|ELG08984.1| ATP synthase epsilon chain [Escherichia coli KTE50]
 gi|431323406|gb|ELG10904.1| ATP synthase epsilon chain [Escherichia coli KTE54]
 gi|431324618|gb|ELG12070.1| ATP synthase epsilon chain [Escherichia coli KTE59]
 gi|431326051|gb|ELG13414.1| ATP synthase epsilon chain [Escherichia coli KTE63]
 gi|431334938|gb|ELG22082.1| ATP synthase epsilon chain [Escherichia coli KTE65]
 gi|431335592|gb|ELG22723.1| ATP synthase epsilon chain [Escherichia coli KTE78]
 gi|431345457|gb|ELG32378.1| ATP synthase epsilon chain [Escherichia coli KTE84]
 gi|431348051|gb|ELG34924.1| ATP synthase epsilon chain [Escherichia coli KTE79]
 gi|431352845|gb|ELG39610.1| ATP synthase epsilon chain [Escherichia coli KTE91]
 gi|431359945|gb|ELG46570.1| ATP synthase epsilon chain [Escherichia coli KTE101]
 gi|431360136|gb|ELG46749.1| ATP synthase epsilon chain [Escherichia coli KTE115]
 gi|431365414|gb|ELG51928.1| ATP synthase epsilon chain [Escherichia coli KTE118]
 gi|431377607|gb|ELG62733.1| ATP synthase epsilon chain [Escherichia coli KTE123]
 gi|431381755|gb|ELG66107.1| ATP synthase epsilon chain [Escherichia coli KTE136]
 gi|431382302|gb|ELG66642.1| ATP synthase epsilon chain [Escherichia coli KTE135]
 gi|431385830|gb|ELG69816.1| ATP synthase epsilon chain [Escherichia coli KTE140]
 gi|431392405|gb|ELG76004.1| ATP synthase epsilon chain [Escherichia coli KTE141]
 gi|431397034|gb|ELG80495.1| ATP synthase epsilon chain [Escherichia coli KTE144]
 gi|431401040|gb|ELG84394.1| ATP synthase epsilon chain [Escherichia coli KTE146]
 gi|431407831|gb|ELG91036.1| ATP synthase epsilon chain [Escherichia coli KTE147]
 gi|431413361|gb|ELG96151.1| ATP synthase epsilon chain [Escherichia coli KTE158]
 gi|431417350|gb|ELG99813.1| ATP synthase epsilon chain [Escherichia coli KTE154]
 gi|431422342|gb|ELH04535.1| ATP synthase epsilon chain [Escherichia coli KTE192]
 gi|431427345|gb|ELH09386.1| ATP synthase epsilon chain [Escherichia coli KTE194]
 gi|431430415|gb|ELH12247.1| ATP synthase epsilon chain [Escherichia coli KTE165]
 gi|431434917|gb|ELH16531.1| ATP synthase epsilon chain [Escherichia coli KTE173]
 gi|431435016|gb|ELH16629.1| ATP synthase epsilon chain [Escherichia coli KTE190]
 gi|431441014|gb|ELH22342.1| ATP synthase epsilon chain [Escherichia coli KTE175]
 gi|431452530|gb|ELH32974.1| ATP synthase epsilon chain [Escherichia coli KTE196]
 gi|431459611|gb|ELH39904.1| ATP synthase epsilon chain [Escherichia coli KTE184]
 gi|431460443|gb|ELH40732.1| ATP synthase epsilon chain [Escherichia coli KTE183]
 gi|431463575|gb|ELH43765.1| ATP synthase epsilon chain [Escherichia coli KTE197]
 gi|431467554|gb|ELH47562.1| ATP synthase epsilon chain [Escherichia coli KTE202]
 gi|431476992|gb|ELH56779.1| ATP synthase epsilon chain [Escherichia coli KTE203]
 gi|431479362|gb|ELH59105.1| ATP synthase epsilon chain [Escherichia coli KTE207]
 gi|431485633|gb|ELH65292.1| ATP synthase epsilon chain [Escherichia coli KTE209]
 gi|431488108|gb|ELH67745.1| ATP synthase epsilon chain [Escherichia coli KTE211]
 gi|431490643|gb|ELH70253.1| ATP synthase epsilon chain [Escherichia coli KTE217]
 gi|431494346|gb|ELH73935.1| ATP synthase epsilon chain [Escherichia coli KTE215]
 gi|431502218|gb|ELH81110.1| ATP synthase epsilon chain [Escherichia coli KTE218]
 gi|431504394|gb|ELH83020.1| ATP synthase epsilon chain [Escherichia coli KTE223]
 gi|431521326|gb|ELH98574.1| ATP synthase epsilon chain [Escherichia coli KTE229]
 gi|431521938|gb|ELH99174.1| ATP synthase epsilon chain [Escherichia coli KTE227]
 gi|431526364|gb|ELI03120.1| ATP synthase epsilon chain [Escherichia coli KTE104]
 gi|431526699|gb|ELI03442.1| ATP synthase epsilon chain [Escherichia coli KTE105]
 gi|431530744|gb|ELI07422.1| ATP synthase epsilon chain [Escherichia coli KTE106]
 gi|431540317|gb|ELI15944.1| ATP synthase epsilon chain [Escherichia coli KTE109]
 gi|431546141|gb|ELI20783.1| ATP synthase epsilon chain [Escherichia coli KTE112]
 gi|431548085|gb|ELI22373.1| ATP synthase epsilon chain [Escherichia coli KTE113]
 gi|431552478|gb|ELI26438.1| ATP synthase epsilon chain [Escherichia coli KTE117]
 gi|431561835|gb|ELI35192.1| ATP synthase epsilon chain [Escherichia coli KTE120]
 gi|431565401|gb|ELI38533.1| ATP synthase epsilon chain [Escherichia coli KTE122]
 gi|431565872|gb|ELI38947.1| ATP synthase epsilon chain [Escherichia coli KTE124]
 gi|431577931|gb|ELI50549.1| ATP synthase epsilon chain [Escherichia coli KTE125]
 gi|431578465|gb|ELI51068.1| ATP synthase epsilon chain [Escherichia coli KTE128]
 gi|431583308|gb|ELI55316.1| ATP synthase epsilon chain [Escherichia coli KTE129]
 gi|431593990|gb|ELI64281.1| ATP synthase epsilon chain [Escherichia coli KTE131]
 gi|431598073|gb|ELI67974.1| ATP synthase epsilon chain [Escherichia coli KTE133]
 gi|431600758|gb|ELI70425.1| ATP synthase epsilon chain [Escherichia coli KTE137]
 gi|431606860|gb|ELI76232.1| ATP synthase epsilon chain [Escherichia coli KTE138]
 gi|431612178|gb|ELI81429.1| ATP synthase epsilon chain [Escherichia coli KTE139]
 gi|431616103|gb|ELI85171.1| ATP synthase epsilon chain [Escherichia coli KTE145]
 gi|431623899|gb|ELI92525.1| ATP synthase epsilon chain [Escherichia coli KTE148]
 gi|431624777|gb|ELI93374.1| ATP synthase epsilon chain [Escherichia coli KTE150]
 gi|431630634|gb|ELI98963.1| ATP synthase epsilon chain [Escherichia coli KTE153]
 gi|431638877|gb|ELJ06755.1| ATP synthase epsilon chain [Escherichia coli KTE157]
 gi|431640252|gb|ELJ08013.1| ATP synthase epsilon chain [Escherichia coli KTE160]
 gi|431642677|gb|ELJ10399.1| ATP synthase epsilon chain [Escherichia coli KTE163]
 gi|431653193|gb|ELJ20305.1| ATP synthase epsilon chain [Escherichia coli KTE166]
 gi|431655873|gb|ELJ22903.1| ATP synthase epsilon chain [Escherichia coli KTE167]
 gi|431657564|gb|ELJ24528.1| ATP synthase epsilon chain [Escherichia coli KTE168]
 gi|431667193|gb|ELJ33785.1| ATP synthase epsilon chain [Escherichia coli KTE174]
 gi|431670082|gb|ELJ36441.1| ATP synthase epsilon chain [Escherichia coli KTE176]
 gi|431673296|gb|ELJ39523.1| ATP synthase epsilon chain [Escherichia coli KTE177]
 gi|431683656|gb|ELJ49285.1| ATP synthase epsilon chain [Escherichia coli KTE179]
 gi|431684081|gb|ELJ49702.1| ATP synthase epsilon chain [Escherichia coli KTE180]
 gi|431687774|gb|ELJ53316.1| ATP synthase epsilon chain [Escherichia coli KTE232]
 gi|431697717|gb|ELJ62815.1| ATP synthase epsilon chain [Escherichia coli KTE82]
 gi|431702188|gb|ELJ66989.1| ATP synthase epsilon chain [Escherichia coli KTE88]
 gi|431702451|gb|ELJ67251.1| ATP synthase epsilon chain [Escherichia coli KTE85]
 gi|431713069|gb|ELJ77328.1| ATP synthase epsilon chain [Escherichia coli KTE90]
 gi|431715952|gb|ELJ80095.1| ATP synthase epsilon chain [Escherichia coli KTE95]
 gi|431717040|gb|ELJ81143.1| ATP synthase epsilon chain [Escherichia coli KTE94]
 gi|431728172|gb|ELJ91893.1| ATP synthase epsilon chain [Escherichia coli KTE97]
 gi|431731446|gb|ELJ94947.1| ATP synthase epsilon chain [Escherichia coli KTE99]
 gi|432349452|gb|ELL43879.1| F0F1 ATP synthase subunit epsilon [Escherichia coli J96]
 gi|441604430|emb|CCP98561.1| ATP synthase epsilon chain [Escherichia coli O10:K5(L):H4 str. ATCC
           23506]
 gi|441655416|emb|CCP99897.1| ATP synthase epsilon chain [Escherichia coli O5:K4(L):H4 str. ATCC
           23502]
 gi|441713463|emb|CCQ06574.1| ATP synthase epsilon chain [Escherichia coli Nissle 1917]
 gi|443424322|gb|AGC89226.1| F0F1 ATP synthase subunit epsilon [Escherichia coli APEC O78]
 gi|444554647|gb|ELV32198.1| ATP synthase F1, epsilon subunit [Escherichia coli 99.0839]
 gi|444559349|gb|ELV36578.1| ATP synthase F1, epsilon subunit [Escherichia coli 99.0848]
 gi|444576122|gb|ELV52334.1| ATP synthase F1, epsilon subunit [Escherichia coli 99.1793]
 gi|444588153|gb|ELV63541.1| ATP synthase F1, epsilon subunit [Escherichia coli 99.1805]
 gi|444589380|gb|ELV64716.1| ATP synthase F1, epsilon subunit [Escherichia coli ATCC 700728]
 gi|444603825|gb|ELV78520.1| ATP synthase F1, epsilon subunit [Escherichia coli PA19]
 gi|444635518|gb|ELW08945.1| ATP synthase F1, epsilon subunit [Escherichia coli 7.1982]
 gi|444642357|gb|ELW15553.1| ATP synthase F1, epsilon subunit [Escherichia coli 99.1762]
 gi|444651941|gb|ELW24726.1| ATP synthase F1, epsilon subunit [Escherichia coli PA35]
 gi|449313720|gb|EMD03914.1| ATP synthase epsilon subunit [Escherichia coli O08]
 gi|449314391|gb|EMD04559.1| ATP synthase epsilon subunit [Escherichia coli S17]
 gi|449316450|gb|EMD06566.1| ATP synthase epsilon subunit [Escherichia coli SEPT362]
          Length = 139

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 21  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQ-PGNVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  +SS         AS+E AKA AQ+ V
Sbjct: 80  LADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELAKAIAQLRV 131


>gi|419911460|ref|ZP_14429942.1| F0F1 ATP synthase subunit epsilon [Escherichia coli KD1]
 gi|388393656|gb|EIL55012.1| F0F1 ATP synthase subunit epsilon [Escherichia coli KD1]
          Length = 137

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 19  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQ-PGNVTV 77

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  +SS         AS+E AKA AQ+ V
Sbjct: 78  LADTAIRGQELDEARAMEAKRKAEEHISSSHGDVDYAQASAELAKAIAQLRV 129


>gi|148252016|ref|YP_001236601.1| F0F1 ATP synthase subunit epsilon [Bradyrhizobium sp. BTAi1]
 gi|166222434|sp|A5E951.1|ATPE_BRASB RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|146404189|gb|ABQ32695.1| ATP synthase F1 subcomplex epsilon subunit [Bradyrhizobium sp.
           BTAi1]
          Length = 135

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 3/103 (2%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F L S  K+ ++ + V QVDVP   G FG+L  H P +A L+PG++TV    G  QKI V
Sbjct: 6   FDLVSPEKIAFSGE-VDQVDVPGQEGDFGVLAGHAPFVATLRPGILTVT-AGGTQQKIIV 63

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELS 125
             G   ++ +  + I+A+ A  +  LD +A    +S  +++L+
Sbjct: 64  LGGLAEIS-EKGLTILADVATSLKELDQTAFAAEISGMEAKLN 105


>gi|124302912|ref|YP_001023707.1| ATP synthase CF1 epsilon subunit [Angiopteris evecta]
 gi|110628310|gb|ABG79606.1| ATP synthase CF1 epsilon subunit [Angiopteris evecta]
          Length = 136

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 67/125 (53%), Gaps = 3/125 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           ++  + + N++ + N  V+++ + + SG  GILPNH P L  L  GVI +   +G    +
Sbjct: 3   LNLRVMAPNRIVW-NSEVQEIILSTNSGQIGILPNHAPLLTALDIGVIRIRR-DGQWSTM 60

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
            +  G  T+ +++ + I+  EA     +D   A++   KA++ L+ A S+    EA +A 
Sbjct: 61  ALMGGFATI-ENNQMTILVNEAETATEIDFEEAQENFQKARTNLAQAESKKRTIEANLAF 119

Query: 141 EVAEA 145
           + A+A
Sbjct: 120 KRAKA 124


>gi|30064964|ref|NP_839135.1| F0F1 ATP synthase subunit epsilon [Shigella flexneri 2a str. 2457T]
 gi|56480423|ref|NP_709544.2| ATP synthase F0F1 subunit epsilon [Shigella flexneri 2a str. 301]
 gi|195936358|ref|ZP_03081740.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O157:H7 str.
           EC4024]
 gi|306815917|ref|ZP_07450055.1| F0F1 ATP synthase subunit epsilon [Escherichia coli NC101]
 gi|386606321|ref|YP_006112621.1| F0F1 ATP synthase subunit epsilon [Escherichia coli UM146]
 gi|386616552|ref|YP_006136218.1| ATP synthase F1, epsilon subunit AtpC [Escherichia coli UMNK88]
 gi|386621415|ref|YP_006140995.1| ATP synthase subunit epsilon [Escherichia coli NA114]
 gi|386641378|ref|YP_006108176.1| membrane-bound ATP synthase, F1 sector, epsilon-subunit
           [Escherichia coli ABU 83972]
 gi|386699246|ref|YP_006163083.1| F0F1 ATP synthase subunit epsilon [Escherichia coli KO11FL]
 gi|386711652|ref|YP_006175373.1| F0F1 ATP synthase subunit epsilon [Escherichia coli W]
 gi|415810981|ref|ZP_11503331.1| ATP synthase F1, epsilon subunit [Escherichia coli LT-68]
 gi|415858240|ref|ZP_11532810.1| ATP synthase F1, epsilon subunit [Shigella flexneri 2a str. 2457T]
 gi|416284450|ref|ZP_11647296.1| ATP synthase epsilon chain [Shigella boydii ATCC 9905]
 gi|416319809|ref|ZP_11662361.1| ATP synthase epsilon chain [Escherichia coli O157:H7 str. EC1212]
 gi|416338054|ref|ZP_11674288.1| ATP synthase epsilon chain [Escherichia coli WV_060327]
 gi|416778623|ref|ZP_11876020.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O157:H7 str.
           G5101]
 gi|416789883|ref|ZP_11880860.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O157:H- str.
           493-89]
 gi|416812623|ref|ZP_11890722.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O55:H7 str.
           3256-97]
 gi|416823044|ref|ZP_11895341.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|417588881|ref|ZP_12239643.1| ATP synthase F1, epsilon subunit [Escherichia coli STEC_C165-02]
 gi|417604647|ref|ZP_12255209.1| ATP synthase F1, epsilon subunit [Escherichia coli STEC_94C]
 gi|417631184|ref|ZP_12281418.1| ATP synthase F1, epsilon subunit [Escherichia coli STEC_MHI813]
 gi|417692229|ref|ZP_12341431.1| ATP synthase F1, epsilon subunit [Shigella boydii 5216-82]
 gi|418305371|ref|ZP_12917165.1| ATP synthase F1, epsilon subunit [Escherichia coli UMNF18]
 gi|419010229|ref|ZP_13557637.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC1C]
 gi|419015929|ref|ZP_13563263.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC1D]
 gi|419020855|ref|ZP_13568152.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC1E]
 gi|419037072|ref|ZP_13584143.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC2D]
 gi|419072082|ref|ZP_13617681.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC3E]
 gi|419077948|ref|ZP_13623445.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC3F]
 gi|419088926|ref|ZP_13634277.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC4B]
 gi|419100649|ref|ZP_13645835.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC4D]
 gi|419106462|ref|ZP_13651583.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC4E]
 gi|419123117|ref|ZP_13668056.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC5B]
 gi|419128535|ref|ZP_13673404.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC5C]
 gi|419133960|ref|ZP_13678784.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC5D]
 gi|419139103|ref|ZP_13683893.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC5E]
 gi|419161610|ref|ZP_13706100.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC6D]
 gi|419216757|ref|ZP_13759756.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC8D]
 gi|419223928|ref|ZP_13766837.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC8E]
 gi|419263593|ref|ZP_13805996.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC10B]
 gi|419274981|ref|ZP_13817266.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC10D]
 gi|419313794|ref|ZP_13855652.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC11E]
 gi|419319236|ref|ZP_13861031.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC12A]
 gi|419325427|ref|ZP_13867109.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC12B]
 gi|419331454|ref|ZP_13873046.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC12C]
 gi|419336870|ref|ZP_13878381.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC12D]
 gi|419342324|ref|ZP_13883777.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC12E]
 gi|419347519|ref|ZP_13888886.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC13A]
 gi|419377866|ref|ZP_13918881.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC14B]
 gi|419917735|ref|ZP_14435962.1| F0F1 ATP synthase subunit epsilon [Escherichia coli KD2]
 gi|419929262|ref|ZP_14446945.1| F0F1 ATP synthase subunit epsilon [Escherichia coli 541-1]
 gi|419934296|ref|ZP_14451435.1| F0F1 ATP synthase subunit epsilon [Escherichia coli 576-1]
 gi|419937719|ref|ZP_14454577.1| F0F1 ATP synthase subunit epsilon [Escherichia coli 75]
 gi|419943728|ref|ZP_14460241.1| F0F1 ATP synthase subunit epsilon [Escherichia coli HM605]
 gi|419949537|ref|ZP_14465778.1| F0F1 ATP synthase subunit epsilon [Escherichia coli CUMT8]
 gi|420272118|ref|ZP_14774466.1| ATP synthase F1, epsilon subunit [Escherichia coli PA22]
 gi|420282886|ref|ZP_14785118.1| ATP synthase F1, epsilon subunit [Escherichia coli TW06591]
 gi|420289130|ref|ZP_14791311.1| ATP synthase F1, epsilon subunit [Escherichia coli TW10246]
 gi|421827343|ref|ZP_16262689.1| ATP synthase F1, epsilon subunit [Escherichia coli FRIK920]
 gi|422751589|ref|ZP_16805498.1| ATP synthase F1 [Escherichia coli H252]
 gi|422756569|ref|ZP_16810391.1| ATP synthase F1 [Escherichia coli H263]
 gi|422764079|ref|ZP_16817831.1| ATP synthase F1 [Escherichia coli E1167]
 gi|422783663|ref|ZP_16836446.1| ATP synthase F1 [Escherichia coli TW10509]
 gi|422801705|ref|ZP_16850201.1| ATP synthase F1 [Escherichia coli M863]
 gi|424137014|ref|ZP_17869435.1| ATP synthase F1, epsilon subunit [Escherichia coli PA10]
 gi|424163666|ref|ZP_17886719.1| ATP synthase F1, epsilon subunit [Escherichia coli PA24]
 gi|424471199|ref|ZP_17920982.1| ATP synthase F1, epsilon subunit [Escherichia coli PA41]
 gi|424496363|ref|ZP_17943884.1| ATP synthase F1, epsilon subunit [Escherichia coli TW09195]
 gi|424502986|ref|ZP_17949856.1| ATP synthase F1, epsilon subunit [Escherichia coli EC4203]
 gi|424509261|ref|ZP_17955614.1| ATP synthase F1, epsilon subunit [Escherichia coli EC4196]
 gi|424559442|ref|ZP_18000821.1| ATP synthase F1, epsilon subunit [Escherichia coli EC4436]
 gi|425140912|ref|ZP_18541279.1| ATP synthase F1, epsilon subunit [Escherichia coli 10.0833]
 gi|425202273|ref|ZP_18598469.1| ATP synthase F1, epsilon subunit [Escherichia coli NE037]
 gi|425251689|ref|ZP_18644619.1| ATP synthase F1, epsilon subunit [Escherichia coli 5905]
 gi|425263749|ref|ZP_18655726.1| ATP synthase F1, epsilon subunit [Escherichia coli EC96038]
 gi|425269739|ref|ZP_18661351.1| ATP synthase F1, epsilon subunit [Escherichia coli 5412]
 gi|425280191|ref|ZP_18671404.1| ATP synthase F1, epsilon subunit [Escherichia coli ARS4.2123]
 gi|425297212|ref|ZP_18687327.1| ATP synthase F1, epsilon subunit [Escherichia coli PA38]
 gi|425302638|ref|ZP_18692517.1| ATP synthase F1, epsilon subunit [Escherichia coli 07798]
 gi|425332343|ref|ZP_18720142.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1846]
 gi|425356926|ref|ZP_18742973.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1850]
 gi|425362875|ref|ZP_18748508.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1856]
 gi|425369140|ref|ZP_18754204.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1862]
 gi|425388331|ref|ZP_18771875.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1866]
 gi|429004658|ref|ZP_19072704.1| ATP synthase F1, epsilon subunit [Escherichia coli 95.0183]
 gi|429041333|ref|ZP_19106408.1| ATP synthase F1, epsilon subunit [Escherichia coli 96.0932]
 gi|444927479|ref|ZP_21246736.1| ATP synthase F1, epsilon subunit [Escherichia coli 09BKT078844]
 gi|444933091|ref|ZP_21252090.1| ATP synthase F1, epsilon subunit [Escherichia coli 99.0814]
 gi|444938558|ref|ZP_21257282.1| ATP synthase F1, epsilon subunit [Escherichia coli 99.0815]
 gi|444944161|ref|ZP_21262637.1| ATP synthase F1, epsilon subunit [Escherichia coli 99.0816]
 gi|444998524|ref|ZP_21315014.1| ATP synthase F1, epsilon subunit [Escherichia coli PA13]
 gi|445004069|ref|ZP_21320449.1| ATP synthase F1, epsilon subunit [Escherichia coli PA2]
 gi|445009439|ref|ZP_21325661.1| ATP synthase F1, epsilon subunit [Escherichia coli PA47]
 gi|445014566|ref|ZP_21330662.1| ATP synthase F1, epsilon subunit [Escherichia coli PA48]
 gi|445020488|ref|ZP_21336444.1| ATP synthase F1, epsilon subunit [Escherichia coli PA8]
 gi|445047613|ref|ZP_21362851.1| ATP synthase F1, epsilon subunit [Escherichia coli 3.4880]
 gi|6625704|gb|AAF19363.1|AF188265_9 ATP synthase subunit epsilon [Salmonella enterica subsp. enterica
           serovar Typhimurium]
 gi|30043225|gb|AAP18946.1| membrane-bound ATP synthase, F1 sector, epsilon-subunit [Shigella
           flexneri 2a str. 2457T]
 gi|56383974|gb|AAN45251.2| membrane-bound ATP synthase, F1 sector, epsilon-subunit [Shigella
           flexneri 2a str. 301]
 gi|305850313|gb|EFM50770.1| F0F1 ATP synthase subunit epsilon [Escherichia coli NC101]
 gi|307555870|gb|ADN48645.1| membrane-bound ATP synthase, F1 sector, epsilon-subunit
           [Escherichia coli ABU 83972]
 gi|307628805|gb|ADN73109.1| F0F1 ATP synthase subunit epsilon [Escherichia coli UM146]
 gi|313647653|gb|EFS12101.1| ATP synthase F1, epsilon subunit [Shigella flexneri 2a str. 2457T]
 gi|320180087|gb|EFW55029.1| ATP synthase epsilon chain [Shigella boydii ATCC 9905]
 gi|320191165|gb|EFW65815.1| ATP synthase epsilon chain [Escherichia coli O157:H7 str. EC1212]
 gi|320193724|gb|EFW68357.1| ATP synthase epsilon chain [Escherichia coli WV_060327]
 gi|320639459|gb|EFX09074.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O157:H7 str.
           G5101]
 gi|320644899|gb|EFX13935.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O157:H- str.
           493-89]
 gi|320655514|gb|EFX23449.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320661137|gb|EFX28573.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|323173356|gb|EFZ58985.1| ATP synthase F1, epsilon subunit [Escherichia coli LT-68]
 gi|323949974|gb|EGB45858.1| ATP synthase F1 [Escherichia coli H252]
 gi|323954974|gb|EGB50752.1| ATP synthase F1 [Escherichia coli H263]
 gi|323965799|gb|EGB61250.1| ATP synthase F1 [Escherichia coli M863]
 gi|323975201|gb|EGB70305.1| ATP synthase F1 [Escherichia coli TW10509]
 gi|324115913|gb|EGC09839.1| ATP synthase F1 [Escherichia coli E1167]
 gi|332084603|gb|EGI89797.1| ATP synthase F1, epsilon subunit [Shigella boydii 5216-82]
 gi|332345721|gb|AEE59055.1| ATP synthase F1, epsilon subunit AtpC [Escherichia coli UMNK88]
 gi|333971916|gb|AEG38721.1| ATP synthase epsilon chain [Escherichia coli NA114]
 gi|339417469|gb|AEJ59141.1| ATP synthase F1, epsilon subunit [Escherichia coli UMNF18]
 gi|345331880|gb|EGW64339.1| ATP synthase F1, epsilon subunit [Escherichia coli STEC_C165-02]
 gi|345347167|gb|EGW79481.1| ATP synthase F1, epsilon subunit [Escherichia coli STEC_94C]
 gi|345370463|gb|EGX02441.1| ATP synthase F1, epsilon subunit [Escherichia coli STEC_MHI813]
 gi|377839167|gb|EHU04266.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC1C]
 gi|377853048|gb|EHU17955.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC1D]
 gi|377856816|gb|EHU21675.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC1E]
 gi|377874743|gb|EHU39369.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC2D]
 gi|377906901|gb|EHU71141.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC3E]
 gi|377917142|gb|EHU81208.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC3F]
 gi|377927988|gb|EHU91903.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC4B]
 gi|377937459|gb|EHV01236.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC4D]
 gi|377944337|gb|EHV08042.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC4E]
 gi|377961865|gb|EHV25330.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC5B]
 gi|377969810|gb|EHV33185.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC5C]
 gi|377970664|gb|EHV34023.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC5D]
 gi|377981227|gb|EHV44487.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC5E]
 gi|378003976|gb|EHV67012.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC6D]
 gi|378060948|gb|EHW23136.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC8D]
 gi|378061046|gb|EHW23233.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC8E]
 gi|378101528|gb|EHW63213.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC10B]
 gi|378112593|gb|EHW74167.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC10D]
 gi|378155713|gb|EHX16772.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC11E]
 gi|378161351|gb|EHX22333.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC12B]
 gi|378165372|gb|EHX26308.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC12A]
 gi|378165725|gb|EHX26656.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC12C]
 gi|378179193|gb|EHX39928.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC12D]
 gi|378182663|gb|EHX43313.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC13A]
 gi|378183237|gb|EHX43883.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC12E]
 gi|378214963|gb|EHX75264.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC14B]
 gi|383390773|gb|AFH15731.1| F0F1 ATP synthase subunit epsilon [Escherichia coli KO11FL]
 gi|383407344|gb|AFH13587.1| F0F1 ATP synthase subunit epsilon [Escherichia coli W]
 gi|388393318|gb|EIL54702.1| F0F1 ATP synthase subunit epsilon [Escherichia coli KD2]
 gi|388403788|gb|EIL64291.1| F0F1 ATP synthase subunit epsilon [Escherichia coli 541-1]
 gi|388409466|gb|EIL69757.1| F0F1 ATP synthase subunit epsilon [Escherichia coli 576-1]
 gi|388411789|gb|EIL71927.1| F0F1 ATP synthase subunit epsilon [Escherichia coli 75]
 gi|388418867|gb|EIL78640.1| F0F1 ATP synthase subunit epsilon [Escherichia coli CUMT8]
 gi|388419925|gb|EIL79630.1| F0F1 ATP synthase subunit epsilon [Escherichia coli HM605]
 gi|390692044|gb|EIN66756.1| ATP synthase F1, epsilon subunit [Escherichia coli PA10]
 gi|390711381|gb|EIN84354.1| ATP synthase F1, epsilon subunit [Escherichia coli PA22]
 gi|390717823|gb|EIN90598.1| ATP synthase F1, epsilon subunit [Escherichia coli PA24]
 gi|390762126|gb|EIO31391.1| ATP synthase F1, epsilon subunit [Escherichia coli PA41]
 gi|390779677|gb|EIO47391.1| ATP synthase F1, epsilon subunit [Escherichia coli TW06591]
 gi|390787104|gb|EIO54596.1| ATP synthase F1, epsilon subunit [Escherichia coli TW10246]
 gi|390822104|gb|EIO88244.1| ATP synthase F1, epsilon subunit [Escherichia coli TW09195]
 gi|390822556|gb|EIO88667.1| ATP synthase F1, epsilon subunit [Escherichia coli EC4203]
 gi|390827663|gb|EIO93413.1| ATP synthase F1, epsilon subunit [Escherichia coli EC4196]
 gi|390880378|gb|EIP41064.1| ATP synthase F1, epsilon subunit [Escherichia coli EC4436]
 gi|408062092|gb|EKG96600.1| ATP synthase F1, epsilon subunit [Escherichia coli FRIK920]
 gi|408112557|gb|EKH44192.1| ATP synthase F1, epsilon subunit [Escherichia coli NE037]
 gi|408161475|gb|EKH89431.1| ATP synthase F1, epsilon subunit [Escherichia coli 5905]
 gi|408177347|gb|EKI04154.1| ATP synthase F1, epsilon subunit [Escherichia coli EC96038]
 gi|408180351|gb|EKI06970.1| ATP synthase F1, epsilon subunit [Escherichia coli 5412]
 gi|408197539|gb|EKI22798.1| ATP synthase F1, epsilon subunit [Escherichia coli ARS4.2123]
 gi|408210636|gb|EKI35198.1| ATP synthase F1, epsilon subunit [Escherichia coli 07798]
 gi|408211712|gb|EKI36255.1| ATP synthase F1, epsilon subunit [Escherichia coli PA38]
 gi|408243031|gb|EKI65576.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1846]
 gi|408271112|gb|EKI91257.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1850]
 gi|408274398|gb|EKI94412.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1856]
 gi|408282207|gb|EKJ01540.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1862]
 gi|408304760|gb|EKJ22182.1| ATP synthase F1, epsilon subunit [Escherichia coli EC1866]
 gi|408575886|gb|EKK51529.1| ATP synthase F1, epsilon subunit [Escherichia coli 10.0833]
 gi|427255889|gb|EKW22125.1| ATP synthase F1, epsilon subunit [Escherichia coli 95.0183]
 gi|427289144|gb|EKW52729.1| ATP synthase F1, epsilon subunit [Escherichia coli 96.0932]
 gi|444534994|gb|ELV15154.1| ATP synthase F1, epsilon subunit [Escherichia coli 99.0814]
 gi|444536709|gb|ELV16712.1| ATP synthase F1, epsilon subunit [Escherichia coli 09BKT078844]
 gi|444545303|gb|ELV24224.1| ATP synthase F1, epsilon subunit [Escherichia coli 99.0815]
 gi|444554515|gb|ELV32074.1| ATP synthase F1, epsilon subunit [Escherichia coli 99.0816]
 gi|444603641|gb|ELV78342.1| ATP synthase F1, epsilon subunit [Escherichia coli PA13]
 gi|444612696|gb|ELV86981.1| ATP synthase F1, epsilon subunit [Escherichia coli PA2]
 gi|444619301|gb|ELV93348.1| ATP synthase F1, epsilon subunit [Escherichia coli PA47]
 gi|444620746|gb|ELV94743.1| ATP synthase F1, epsilon subunit [Escherichia coli PA48]
 gi|444627213|gb|ELW00991.1| ATP synthase F1, epsilon subunit [Escherichia coli PA8]
 gi|444657203|gb|ELW29696.1| ATP synthase F1, epsilon subunit [Escherichia coli 3.4880]
          Length = 137

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 19  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQ-PGNVTV 77

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  +SS         AS+E AKA AQ+ V
Sbjct: 78  LADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELAKAIAQLRV 129


>gi|6729899|pdb|1BSH|A Chain A, Solution Structure Of The Epsilon Subunit Of The F1-
           Atpsynthase From Escherichia Coli And Orientation Of The
           Subunit Relative To The Beta Subunits Of The Complex
 gi|6729900|pdb|1BSN|A Chain A, Solution Structure Of The Epsilon Subunit Of The F1-
           Atpsynthase From Escherichia Coli And Orientation Of The
           Subunit Relative To The Beta Subunits Of The Complex
 gi|14278248|pdb|1FS0|E Chain E, Complex Of GammaEPSILON ATP SYNTHASE FROM E.COLI
 gi|333944309|pdb|3OAA|H Chain H, Structure Of The E.Coli F1-Atp Synthase Inhibited By
           Subunit Epsilon
 gi|333944317|pdb|3OAA|P Chain P, Structure Of The E.Coli F1-Atp Synthase Inhibited By
           Subunit Epsilon
 gi|333944325|pdb|3OAA|X Chain X, Structure Of The E.Coli F1-Atp Synthase Inhibited By
           Subunit Epsilon
 gi|333944333|pdb|3OAA|FF Chain f, Structure Of The E.Coli F1-Atp Synthase Inhibited By
           Subunit Epsilon
          Length = 138

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 20  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQ-PGNVTV 78

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  +SS         AS+E AKA AQ+ V
Sbjct: 79  LADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELAKAIAQLRV 130


>gi|419351981|ref|ZP_13893308.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC13B]
 gi|378195881|gb|EHX56372.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC13B]
          Length = 162

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 21  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQ-PGNVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  +SS         AS+E AKA AQ+ V
Sbjct: 80  LADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELAKAIAQLRV 131


>gi|146329853|ref|YP_001210025.1| ATP synthase F1 subunit epsilon [Dichelobacter nodosus VCS1703A]
 gi|166222456|sp|A5EXL3.1|ATPE_DICNV RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|146233323|gb|ABQ14301.1| ATP synthase F1, epsilon subunit [Dichelobacter nodosus VCS1703A]
          Length = 143

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 59/106 (55%), Gaps = 2/106 (1%)

Query: 25  LASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSS 84
           + S ++  ++ + V Q+  P+  G  GIL NH+P +A LKPG + + +++G  + ++VS 
Sbjct: 9   IVSPDRALFSGEVV-QIVAPAEYGELGILSNHIPLIATLKPGQVRLTKSDGEEEVLYVSG 67

Query: 85  GTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
           G I V    ++ I+A+EA     LD    ++  ++A+  + S   E
Sbjct: 68  GFIEVQSKQTI-ILADEAARAAELDEEKIKEAKARAEKLIKSPDGE 112


>gi|6573687|pdb|1QO1|J Chain J, Molecular Architecture Of The Rotary Motor In Atp Synthase
           From Yeast Mitochondria
 gi|157830030|pdb|1AQT|A Chain A, Epsilon Subunit Of F1f0-Atp Synthase From Escherichia Coli
          Length = 138

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 20  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQ-PGNVTV 78

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  +SS         AS+E AKA AQ+ V
Sbjct: 79  LADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELAKAIAQLRV 130


>gi|398305166|ref|ZP_10508752.1| F0F1 ATP synthase subunit epsilon [Bacillus vallismortis DV1-F-3]
          Length = 132

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 61/107 (57%), Gaps = 2/107 (1%)

Query: 37  NVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQ 96
           +++ V V + SG  GILP H+PT+A LK G + + + +G ++ + VS G + V  D  V 
Sbjct: 19  DIEMVSVRAESGDLGILPGHIPTVAPLKIGAVRL-KKDGQTELVAVSGGFVEVRPD-HVT 76

Query: 97  IIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
           I+A+ A   + +D   A     +AQ  L+S S +T    A++A++ A
Sbjct: 77  ILAQTAEQAEGIDKERAEAARQRAQERLNSQSYDTDIRRAELALQRA 123


>gi|330850636|ref|YP_004376517.1| ATP synthase CF1 epsilon subunit [Ptilidium pulcherrimum]
 gi|302024765|gb|ADK89611.1| ATP synthase CF1 epsilon subunit [Ptilidium pulcherrimum]
          Length = 135

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 64/125 (51%), Gaps = 3/125 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           ++  + + N++ + N  ++++ + + SG  GILPNH P L  L  G++ +   E  S   
Sbjct: 3   LNLRVMAPNRIVW-NSEIQEIILSTNSGQIGILPNHAPLLTALDIGIVKIRLKEQWSTMA 61

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
            +  G   + +++ + I+  EA     +D   A++   KA++ L+ A  +    EA +A 
Sbjct: 62  LM--GGFAMIENNQMTILVNEAEKATEIDFQEAQETFRKAKTSLTQAEGKKQSIEANLAF 119

Query: 141 EVAEA 145
           E A+A
Sbjct: 120 ERAKA 124


>gi|126728279|ref|ZP_01744095.1| ATP synthase F1, epsilon subunit [Sagittula stellata E-37]
 gi|126711244|gb|EBA10294.1| ATP synthase F1, epsilon subunit [Sagittula stellata E-37]
          Length = 144

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 67/136 (49%), Gaps = 5/136 (3%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           AD M F L S  +   + + V  V +P   G    +PNH PT+  L+PG++TV ET G +
Sbjct: 2   ADTMQFDLVSPERKLLSAE-VTSVQIPGADGDMTAMPNHAPTITTLRPGLLTV-ETTGGT 59

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           +   V+ G   + ++ SV  +AE+A P   +D  A  + L K   E    + E  + E  
Sbjct: 60  EVFVVTGGFAEIGENVSV--LAEKALPKGDMD-QATYEALVKEAHEAYQQTKEAYQNEPG 116

Query: 138 IAVEVAEALKIFVSSG 153
              E A+ L+  V+ G
Sbjct: 117 PVDEAAKLLQDMVAVG 132


>gi|311070199|ref|YP_003975122.1| F0F1 ATP synthase subunit epsilon [Bacillus atrophaeus 1942]
 gi|419821428|ref|ZP_14345022.1| F0F1 ATP synthase subunit epsilon [Bacillus atrophaeus C89]
 gi|310870716|gb|ADP34191.1| F0F1 ATP synthase subunit epsilon [Bacillus atrophaeus 1942]
 gi|388474401|gb|EIM11130.1| F0F1 ATP synthase subunit epsilon [Bacillus atrophaeus C89]
          Length = 132

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 62/107 (57%), Gaps = 2/107 (1%)

Query: 37  NVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQ 96
           +++ V V + SG  GILP H+PT+A LK G + + + +G ++ + VS G + V  D  V 
Sbjct: 19  DIEMVSVRAESGELGILPGHIPTVAPLKIGAVRL-KKDGQTELVAVSGGFVEVRPD-HVT 76

Query: 97  IIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
           I+A+ A   + +D   A+    +AQ  L++ S +T    A++A++ A
Sbjct: 77  ILAQSAETAEGIDTERAQAAKQRAQDRLNTRSDDTDIRRAELALQRA 123


>gi|336450462|ref|ZP_08620913.1| ATP synthase, F1 epsilon subunit [Idiomarina sp. A28L]
 gi|336282857|gb|EGN76078.1| ATP synthase, F1 epsilon subunit [Idiomarina sp. A28L]
          Length = 142

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 64/118 (54%), Gaps = 5/118 (4%)

Query: 29  NKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTIT 88
           +++F  + N++ + V    G  GILP H P L  LKPG++ V   EG  +  +++ G + 
Sbjct: 15  DRLF--SGNIRSIQVTGSEGELGILPGHTPLLTALKPGMVRVVTEEGEEELFYIAGGVME 72

Query: 89  VNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           V  + ++ ++++ A     LD +A    +  A+  L+ +S + + AEA  A E++ A+
Sbjct: 73  VQPE-TITVLSDTAVRGGDLDEAATEKAIKDAREALAHSSPDLSYAEA--AAELSRAI 127


>gi|134294239|ref|YP_001117974.1| F0F1 ATP synthase subunit epsilon [Burkholderia vietnamiensis G4]
 gi|387900865|ref|YP_006331204.1| ATP synthase subunit epsilon [Burkholderia sp. KJ006]
 gi|134137396|gb|ABO53139.1| ATP synthase F1 subcomplex epsilon subunit [Burkholderia
           vietnamiensis G4]
 gi|387575757|gb|AFJ84473.1| ATP synthase epsilon chain [Burkholderia sp. KJ006]
          Length = 141

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 63/109 (57%), Gaps = 5/109 (4%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK-IFVSSGTITVNDDSSVQI 97
           K V +P  +G  GILP H P +  ++PG + + E EG + + +FV+ G + V    +V +
Sbjct: 21  KFVALPGETGELGILPGHTPLITRIRPGAVRI-EVEGSNDEFVFVAGGILEVQ-PGAVTV 78

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSSASS--ETAKAEAQIAVEVAE 144
           +A+ A     LDA+ A D   +A+  L +A S  + AKA++++A  +A+
Sbjct: 79  LADTAIRGKDLDAAKAEDARKRAEETLQNAKSDLDLAKAQSELATAMAQ 127


>gi|406928619|gb|EKD64390.1| F0F1 ATP synthase subunit epsilon [uncultured bacterium]
          Length = 151

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 22/141 (15%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPG--VITVYETEGVSQ 78
           +D  + + +KV +  + VKQ+  P+  G   +LPNH+P +A L+ G   + V + EG+  
Sbjct: 6   IDLDIVTLDKVLFKGK-VKQITAPTKMGEITVLPNHIPLVATLEAGELKMKVNDGEGIYS 64

Query: 79  K----IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQ------------- 121
                I VS G + V   + + IIA+ A  VD +D   A +   KA+             
Sbjct: 65  PDMIYIAVSGGFMEVKPGNIINIIADSAMRVDEIDEKKAMEAKEKAEEMLKAFQEGKRHV 124

Query: 122 --SELSSASSETAKAEAQIAV 140
              E   ASS+ AKA A++ V
Sbjct: 125 SDQEFVGASSQLAKALAELKV 145


>gi|429106877|ref|ZP_19168746.1| ATP synthase epsilon chain [Cronobacter malonaticus 681]
 gi|426293600|emb|CCJ94859.1| ATP synthase epsilon chain [Cronobacter malonaticus 681]
          Length = 137

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V  D +V +
Sbjct: 19  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEYIYLSGGVLEVQPD-NVTV 77

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  + S         AS+E AKA A++ V
Sbjct: 78  LADTAIRGQDLDEARALEAKRKAEDHIRSSHGDVDYAQASAELAKAIAKLRV 129


>gi|15804331|ref|NP_290370.1| ATP synthase F0F1 subunit epsilon [Escherichia coli O157:H7 str.
           EDL933]
 gi|15833927|ref|NP_312700.1| ATP synthase F0F1 subunit epsilon [Escherichia coli O157:H7 str.
           Sakai]
 gi|189403743|ref|ZP_02784938.2| ATP synthase F1, epsilon subunit [Escherichia coli O157:H7 str.
           EC4501]
 gi|387884969|ref|YP_006315271.1| F0F1 ATP synthase subunit epsilon [Escherichia coli Xuzhou21]
 gi|419053617|ref|ZP_13600483.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC3B]
 gi|419059575|ref|ZP_13606375.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC3C]
 gi|419111844|ref|ZP_13656895.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC4F]
 gi|420295011|ref|ZP_14797118.1| ATP synthase F1, epsilon subunit [Escherichia coli TW11039]
 gi|421820534|ref|ZP_16256018.1| ATP synthase F1, epsilon subunit [Escherichia coli 10.0821]
 gi|423727961|ref|ZP_17701746.1| ATP synthase F1, epsilon subunit [Escherichia coli PA31]
 gi|424112402|ref|ZP_17846614.1| ATP synthase F1, epsilon subunit [Escherichia coli 93-001]
 gi|424124536|ref|ZP_17857819.1| ATP synthase F1, epsilon subunit [Escherichia coli PA5]
 gi|424143569|ref|ZP_17875407.1| ATP synthase F1, epsilon subunit [Escherichia coli PA14]
 gi|424452271|ref|ZP_17903900.1| ATP synthase F1, epsilon subunit [Escherichia coli PA32]
 gi|424458436|ref|ZP_17909519.1| ATP synthase F1, epsilon subunit [Escherichia coli PA33]
 gi|424528667|ref|ZP_17972363.1| ATP synthase F1, epsilon subunit [Escherichia coli EC4421]
 gi|425100513|ref|ZP_18503234.1| ATP synthase F1, epsilon subunit [Escherichia coli 3.4870]
 gi|425112621|ref|ZP_18514528.1| ATP synthase F1, epsilon subunit [Escherichia coli 6.0172]
 gi|425170666|ref|ZP_18569126.1| ATP synthase F1, epsilon subunit [Escherichia coli FDA507]
 gi|425176711|ref|ZP_18574817.1| ATP synthase F1, epsilon subunit [Escherichia coli FDA504]
 gi|425189068|ref|ZP_18586325.1| ATP synthase F1, epsilon subunit [Escherichia coli FRIK1997]
 gi|425214411|ref|ZP_18609800.1| ATP synthase F1, epsilon subunit [Escherichia coli PA4]
 gi|425227181|ref|ZP_18621635.1| ATP synthase F1, epsilon subunit [Escherichia coli PA49]
 gi|425233342|ref|ZP_18627368.1| ATP synthase F1, epsilon subunit [Escherichia coli PA45]
 gi|425419883|ref|ZP_18801140.1| ATP synthase F1, epsilon subunit [Escherichia coli FRIK523]
 gi|428955659|ref|ZP_19027436.1| ATP synthase F1, epsilon subunit [Escherichia coli 88.1042]
 gi|428992374|ref|ZP_19061348.1| ATP synthase F1, epsilon subunit [Escherichia coli 93.0056]
 gi|428998269|ref|ZP_19066848.1| ATP synthase F1, epsilon subunit [Escherichia coli 94.0618]
 gi|429010680|ref|ZP_19078067.1| ATP synthase F1, epsilon subunit [Escherichia coli 95.1288]
 gi|429017160|ref|ZP_19084023.1| ATP synthase F1, epsilon subunit [Escherichia coli 95.0943]
 gi|429022925|ref|ZP_19089428.1| ATP synthase F1, epsilon subunit [Escherichia coli 96.0428]
 gi|429029080|ref|ZP_19095041.1| ATP synthase F1, epsilon subunit [Escherichia coli 96.0427]
 gi|429047088|ref|ZP_19111786.1| ATP synthase F1, epsilon subunit [Escherichia coli 96.0107]
 gi|429063581|ref|ZP_19127544.1| ATP synthase F1, epsilon subunit [Escherichia coli 97.0007]
 gi|429828995|ref|ZP_19359976.1| ATP synthase F1, epsilon subunit [Escherichia coli 96.0109]
 gi|429835455|ref|ZP_19365688.1| ATP synthase F1, epsilon subunit [Escherichia coli 97.0010]
 gi|444965902|ref|ZP_21283454.1| ATP synthase F1, epsilon subunit [Escherichia coli 99.1775]
 gi|444987967|ref|ZP_21304735.1| ATP synthase F1, epsilon subunit [Escherichia coli PA11]
 gi|445053175|ref|ZP_21368186.1| ATP synthase F1, epsilon subunit [Escherichia coli 95.0083]
 gi|445061217|ref|ZP_21373725.1| ATP synthase F1, epsilon subunit [Escherichia coli 99.0670]
 gi|20137293|sp|P58646.2|ATPE_ECO57 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|12518588|gb|AAG58934.1|AE005605_2 membrane-bound ATP synthase, F1 sector, epsilon-subunit
           [Escherichia coli O157:H7 str. EDL933]
 gi|13364148|dbj|BAB38096.1| membrane-bound ATP synthase epsilon-subunit AtpC [Escherichia coli
           O157:H7 str. Sakai]
 gi|189369862|gb|EDU88278.1| ATP synthase F1, epsilon subunit [Escherichia coli O157:H7 str.
           EC4501]
 gi|209753900|gb|ACI75257.1| membrane-bound ATP synthase beta-subunit AtpD [Escherichia coli]
 gi|377890007|gb|EHU54466.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC3B]
 gi|377902797|gb|EHU67100.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC3C]
 gi|377954867|gb|EHV18426.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC4F]
 gi|386798427|gb|AFJ31461.1| F0F1 ATP synthase subunit epsilon [Escherichia coli Xuzhou21]
 gi|390656727|gb|EIN34580.1| ATP synthase F1, epsilon subunit [Escherichia coli 93-001]
 gi|390677392|gb|EIN53439.1| ATP synthase F1, epsilon subunit [Escherichia coli PA5]
 gi|390696286|gb|EIN70768.1| ATP synthase F1, epsilon subunit [Escherichia coli PA14]
 gi|390737089|gb|EIO08400.1| ATP synthase F1, epsilon subunit [Escherichia coli PA31]
 gi|390737610|gb|EIO08894.1| ATP synthase F1, epsilon subunit [Escherichia coli PA32]
 gi|390741203|gb|EIO12287.1| ATP synthase F1, epsilon subunit [Escherichia coli PA33]
 gi|390793220|gb|EIO60564.1| ATP synthase F1, epsilon subunit [Escherichia coli TW11039]
 gi|390847824|gb|EIP11345.1| ATP synthase F1, epsilon subunit [Escherichia coli EC4421]
 gi|408080447|gb|EKH14522.1| ATP synthase F1, epsilon subunit [Escherichia coli FDA507]
 gi|408088584|gb|EKH21945.1| ATP synthase F1, epsilon subunit [Escherichia coli FDA504]
 gi|408100989|gb|EKH33463.1| ATP synthase F1, epsilon subunit [Escherichia coli FRIK1997]
 gi|408125195|gb|EKH55824.1| ATP synthase F1, epsilon subunit [Escherichia coli PA4]
 gi|408137083|gb|EKH66798.1| ATP synthase F1, epsilon subunit [Escherichia coli PA49]
 gi|408143943|gb|EKH73203.1| ATP synthase F1, epsilon subunit [Escherichia coli PA45]
 gi|408334212|gb|EKJ49111.1| ATP synthase F1, epsilon subunit [Escherichia coli FRIK523]
 gi|408545609|gb|EKK23036.1| ATP synthase F1, epsilon subunit [Escherichia coli 3.4870]
 gi|408546432|gb|EKK23847.1| ATP synthase F1, epsilon subunit [Escherichia coli 6.0172]
 gi|408609468|gb|EKK82849.1| ATP synthase F1, epsilon subunit [Escherichia coli 10.0821]
 gi|427201559|gb|EKV71940.1| ATP synthase F1, epsilon subunit [Escherichia coli 88.1042]
 gi|427238505|gb|EKW06022.1| ATP synthase F1, epsilon subunit [Escherichia coli 93.0056]
 gi|427242997|gb|EKW10392.1| ATP synthase F1, epsilon subunit [Escherichia coli 94.0618]
 gi|427257682|gb|EKW23800.1| ATP synthase F1, epsilon subunit [Escherichia coli 95.0943]
 gi|427258238|gb|EKW24332.1| ATP synthase F1, epsilon subunit [Escherichia coli 95.1288]
 gi|427273286|gb|EKW37975.1| ATP synthase F1, epsilon subunit [Escherichia coli 96.0428]
 gi|427275117|gb|EKW39741.1| ATP synthase F1, epsilon subunit [Escherichia coli 96.0427]
 gi|427295924|gb|EKW58996.1| ATP synthase F1, epsilon subunit [Escherichia coli 96.0107]
 gi|427311103|gb|EKW73321.1| ATP synthase F1, epsilon subunit [Escherichia coli 97.0007]
 gi|429250837|gb|EKY35479.1| ATP synthase F1, epsilon subunit [Escherichia coli 96.0109]
 gi|429251325|gb|EKY35932.1| ATP synthase F1, epsilon subunit [Escherichia coli 97.0010]
 gi|444572363|gb|ELV48796.1| ATP synthase F1, epsilon subunit [Escherichia coli 99.1775]
 gi|444589753|gb|ELV65081.1| ATP synthase F1, epsilon subunit [Escherichia coli PA11]
 gi|444659993|gb|ELW32378.1| ATP synthase F1, epsilon subunit [Escherichia coli 95.0083]
 gi|444667078|gb|ELW39127.1| ATP synthase F1, epsilon subunit [Escherichia coli 99.0670]
          Length = 139

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 21  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQ-LGNVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  +SS         AS+E AKA AQ+ V
Sbjct: 80  LADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELAKAIAQLRV 131


>gi|187777252|ref|ZP_02993725.1| hypothetical protein CLOSPO_00804 [Clostridium sporogenes ATCC
           15579]
 gi|187774180|gb|EDU37982.1| ATP synthase F1, epsilon subunit [Clostridium sporogenes ATCC
           15579]
          Length = 133

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 2/106 (1%)

Query: 19  DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQ 78
           D ++ T+ +  K     + +K+V      G   ILPNHV  +  LKP + T  +  G  +
Sbjct: 3   DNIELTIFTPEKNIKIGE-IKEVITEGLDGKLAILPNHVNMITYLKPTITTYIDLNGNKK 61

Query: 79  KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSEL 124
            IF SSG + V DD  + II + +   + +D + A +   +A+  L
Sbjct: 62  NIFTSSGVLKV-DDKKIYIICDASEKPEDIDINRAENAKKRAEERL 106


>gi|428697694|ref|YP_007026145.1| ATP synthase CF1 epsilon subunit (chloroplast) [Pellia
           endiviifolia]
 gi|408773108|gb|AFU88855.1| ATP synthase CF1 epsilon subunit (chloroplast) [Pellia
           endiviifolia]
          Length = 139

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 3/125 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           ++  + + N++ + N  V+++ + + SG  GILPNH P L  L  G+I +   E  S   
Sbjct: 3   LNLRVMAPNRIVW-NSEVQEIILSTNSGRIGILPNHAPLLTALDIGIIKIRLKEQWSTMA 61

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
            +  G   + +++ + I+  EA     +D   A++   KA++ L+ A  +    EA +A 
Sbjct: 62  LM--GGFAMIENNRMTILVNEAEKAIEIDFYEAQETFKKARANLAQAEGKKQSIEANLAF 119

Query: 141 EVAEA 145
           E A A
Sbjct: 120 ERARA 124


>gi|299065198|emb|CBJ36364.1| ATP synthase, F1 sector, epsilon subunit [Ralstonia solanacearum
           CMR15]
          Length = 138

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 3/110 (2%)

Query: 37  NVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQ 96
           N K V +P  +G  GILP H P +  +KPG + + + +G  + +FV+ G + V     V 
Sbjct: 19  NAKFVALPGEAGELGILPGHTPLITRIKPGAVRIEKEDGGEEFVFVAGGILEVQ-PKKVT 77

Query: 97  IIAEEAHPVDSLDASAARDVLSKAQSELSSASS--ETAKAEAQIAVEVAE 144
           ++A+ A     LD + A +    A+  L + SS  + A+A+ ++AV  A+
Sbjct: 78  VLADTAIRGHDLDEAKASEAKRAAEEALQNQSSDLDLARAQGELAVATAQ 127


>gi|378821595|ref|ZP_09844475.1| ATP synthase F1, epsilon subunit [Sutterella parvirubra YIT 11816]
 gi|378599540|gb|EHY32548.1| ATP synthase F1, epsilon subunit [Sutterella parvirubra YIT 11816]
          Length = 139

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 54/95 (56%), Gaps = 1/95 (1%)

Query: 41  VDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAE 100
           V +P  SG  GILP H+P + +++PG + ++      +++FV+ G + V  D  V ++A+
Sbjct: 23  VSLPGKSGELGILPGHLPLITLIRPGFVRIHLPNKEVEQVFVAGGVLEVQPD-VVTVLAD 81

Query: 101 EAHPVDSLDASAARDVLSKAQSELSSASSETAKAE 135
            A     LD + A+  L +A++   +A+ E A A+
Sbjct: 82  TAIRSQDLDEAKAQKALEEARAARQNATGELAIAK 116


>gi|429769423|ref|ZP_19301533.1| ATP synthase, delta/epsilon subunit, beta-sandwich domain protein
           [Brevundimonas diminuta 470-4]
 gi|429187087|gb|EKY28007.1| ATP synthase, delta/epsilon subunit, beta-sandwich domain protein
           [Brevundimonas diminuta 470-4]
          Length = 89

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 5/86 (5%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           A +++F+L +  +  +   +V QVD P   G FG+LP H P +  L+ GV+TVY  +G  
Sbjct: 2   AGKLNFSLVAPEREVFAG-SVDQVDAPGVEGDFGVLPGHAPFMTTLREGVVTVY--DGAQ 58

Query: 78  QKIF-VSSGTITVNDDSSVQIIAEEA 102
           ++ F V  G   VN +  + I+AEEA
Sbjct: 59  RRRFEVKGGFADVNGE-GLTILAEEA 83


>gi|424534807|ref|ZP_17978141.1| ATP synthase F1, epsilon subunit [Escherichia coli EC4422]
 gi|390858316|gb|EIP20714.1| ATP synthase F1, epsilon subunit [Escherichia coli EC4422]
          Length = 124

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 6   VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQ-LGNVTV 64

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  +SS         AS+E AKA AQ+ V
Sbjct: 65  LADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELAKAIAQLRV 116


>gi|217326483|ref|ZP_03442567.1| ATP synthase F1, epsilon subunit [Escherichia coli O157:H7 str.
           TW14588]
 gi|416313630|ref|ZP_11658347.1| ATP synthase epsilon chain [Escherichia coli O157:H7 str. 1044]
 gi|419047852|ref|ZP_13594781.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC3A]
 gi|419065129|ref|ZP_13611836.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC3D]
 gi|421833374|ref|ZP_16268652.1| ATP synthase F1, epsilon subunit [Escherichia coli PA7]
 gi|424080070|ref|ZP_17817011.1| ATP synthase F1, epsilon subunit [Escherichia coli FDA505]
 gi|424149940|ref|ZP_17881301.1| ATP synthase F1, epsilon subunit [Escherichia coli PA15]
 gi|424477690|ref|ZP_17926991.1| ATP synthase F1, epsilon subunit [Escherichia coli PA42]
 gi|425128552|ref|ZP_18529707.1| ATP synthase F1, epsilon subunit [Escherichia coli 8.0586]
 gi|425164918|ref|ZP_18563792.1| ATP synthase F1, epsilon subunit [Escherichia coli FDA506]
 gi|425220539|ref|ZP_18615488.1| ATP synthase F1, epsilon subunit [Escherichia coli PA23]
 gi|425239263|ref|ZP_18632970.1| ATP synthase F1, epsilon subunit [Escherichia coli TT12B]
 gi|425413569|ref|ZP_18795316.1| ATP synthase F1, epsilon subunit [Escherichia coli NE098]
 gi|425431181|ref|ZP_18811775.1| ATP synthase F1, epsilon subunit [Escherichia coli 0.1304]
 gi|428961679|ref|ZP_19032945.1| ATP synthase F1, epsilon subunit [Escherichia coli 89.0511]
 gi|428980474|ref|ZP_19050270.1| ATP synthase F1, epsilon subunit [Escherichia coli 90.2281]
 gi|428986231|ref|ZP_19055606.1| ATP synthase F1, epsilon subunit [Escherichia coli 93.0055]
 gi|429052513|ref|ZP_19117071.1| ATP synthase F1, epsilon subunit [Escherichia coli 97.0003]
 gi|429080767|ref|ZP_19143894.1| ATP synthase F1, epsilon subunit [Escherichia coli 99.0713]
 gi|444960667|ref|ZP_21278480.1| ATP synthase F1, epsilon subunit [Escherichia coli 99.1753]
 gi|445031306|ref|ZP_21346962.1| ATP synthase F1, epsilon subunit [Escherichia coli 99.1781]
 gi|217322704|gb|EEC31128.1| ATP synthase F1, epsilon subunit [Escherichia coli O157:H7 str.
           TW14588]
 gi|326340521|gb|EGD64320.1| ATP synthase epsilon chain [Escherichia coli O157:H7 str. 1044]
 gi|377889246|gb|EHU53712.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC3A]
 gi|377905496|gb|EHU69764.1| ATP synthase F1, epsilon subunit [Escherichia coli DEC3D]
 gi|390637797|gb|EIN17335.1| ATP synthase F1, epsilon subunit [Escherichia coli FDA505]
 gi|390697562|gb|EIN71974.1| ATP synthase F1, epsilon subunit [Escherichia coli PA15]
 gi|390765188|gb|EIO34370.1| ATP synthase F1, epsilon subunit [Escherichia coli PA42]
 gi|408061610|gb|EKG96123.1| ATP synthase F1, epsilon subunit [Escherichia coli PA7]
 gi|408075972|gb|EKH10202.1| ATP synthase F1, epsilon subunit [Escherichia coli FDA506]
 gi|408134952|gb|EKH64764.1| ATP synthase F1, epsilon subunit [Escherichia coli PA23]
 gi|408152373|gb|EKH80813.1| ATP synthase F1, epsilon subunit [Escherichia coli TT12B]
 gi|408323286|gb|EKJ39249.1| ATP synthase F1, epsilon subunit [Escherichia coli NE098]
 gi|408342351|gb|EKJ56780.1| ATP synthase F1, epsilon subunit [Escherichia coli 0.1304]
 gi|408563824|gb|EKK39950.1| ATP synthase F1, epsilon subunit [Escherichia coli 8.0586]
 gi|427201776|gb|EKV72145.1| ATP synthase F1, epsilon subunit [Escherichia coli 89.0511]
 gi|427221385|gb|EKV90235.1| ATP synthase F1, epsilon subunit [Escherichia coli 90.2281]
 gi|427238634|gb|EKW06149.1| ATP synthase F1, epsilon subunit [Escherichia coli 93.0055]
 gi|427298144|gb|EKW61166.1| ATP synthase F1, epsilon subunit [Escherichia coli 97.0003]
 gi|427326620|gb|EKW88029.1| ATP synthase F1, epsilon subunit [Escherichia coli 99.0713]
 gi|444568997|gb|ELV45635.1| ATP synthase F1, epsilon subunit [Escherichia coli 99.1753]
 gi|444637551|gb|ELW10923.1| ATP synthase F1, epsilon subunit [Escherichia coli 99.1781]
          Length = 137

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 19  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQ-LGNVTV 77

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  +SS         AS+E AKA AQ+ V
Sbjct: 78  LADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELAKAIAQLRV 129


>gi|197286890|ref|YP_002152762.1| ATP synthase subunit epsilon [Proteus mirabilis HI4320]
 gi|227354877|ref|ZP_03839292.1| H (+)-transporting two-sector ATPase, subunit epsilon [Proteus
           mirabilis ATCC 29906]
 gi|425070603|ref|ZP_18473715.1| ATP synthase epsilon chain [Proteus mirabilis WGLW6]
 gi|425070837|ref|ZP_18473943.1| ATP synthase epsilon chain [Proteus mirabilis WGLW4]
 gi|226740274|sp|B4F0E8.1|ATPE_PROMH RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|194684377|emb|CAR46026.1| ATP synthase epsilon chain [Proteus mirabilis HI4320]
 gi|227165030|gb|EEI49866.1| H (+)-transporting two-sector ATPase, subunit epsilon [Proteus
           mirabilis ATCC 29906]
 gi|404594506|gb|EKA95083.1| ATP synthase epsilon chain [Proteus mirabilis WGLW6]
 gi|404599662|gb|EKB00115.1| ATP synthase epsilon chain [Proteus mirabilis WGLW4]
          Length = 138

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 11/129 (8%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
               + S  K  Y  + VK + V    G  GI P H P L  +KPG++ V +T G  + I
Sbjct: 6   FHLKVVSAEKHLYDGE-VKHIQVTGSEGELGIYPQHTPLLTAIKPGMVRVVKTSGEEEFI 64

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSET 131
           ++S G + V   + V ++A+ A     LD + A +   KA+  + S         AS+E 
Sbjct: 65  YLSGGILEVQ-PTGVIVLADTAIRGRDLDEAKALESKRKAEEHIQSSHGDVDYAQASAEL 123

Query: 132 AKAEAQIAV 140
           AKA A++ V
Sbjct: 124 AKAIAKLRV 132


>gi|406985858|gb|EKE06568.1| F0F1 ATP synthase subunit epsilon [uncultured bacterium]
          Length = 137

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 57/109 (52%), Gaps = 1/109 (0%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           +DF +A    + Y  + V+++ +P+ SG   +L NH P +++L  G + V+ +   +  I
Sbjct: 2   IDFKIAKPEGIVYEGE-VERITIPTLSGEITVLENHAPLVSVLDTGEMIVHVSNKETVSI 60

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASS 129
            +S G + +  DS V I+A+ A   + +D   A +  ++AQ  L    +
Sbjct: 61  SISGGILEIRPDSKVYIMADSAEKSEEIDIERAEEAKNRAQEMLEKEKN 109


>gi|308746035|ref|YP_003934564.1| ATP synthase CF1 epsilon subunit [Cheilanthes lindheimeri]
 gi|302375468|gb|ADL29842.1| ATP synthase CF1 epsilon subunit [Cheilanthes lindheimeri]
          Length = 132

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 3/117 (2%)

Query: 29  NKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTIT 88
           N++ + N  V ++ + + SG  GILPNH P L  L  GV  +   E  S     S G   
Sbjct: 11  NRIVW-NSKVWEIILSTSSGQIGILPNHAPLLTALDMGVSKIRSDEQWSA--MASMGGFA 67

Query: 89  VNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEA 145
           + D++ V I+  EA     +D   A+     AQ+EL+ A  +    EA +A + A+A
Sbjct: 68  MIDNNRVTILVNEAERASEIDLEEAQKSFQTAQAELAKAEGKKRIIEANLAFKRAKA 124


>gi|340029097|ref|ZP_08665160.1| ATP synthase F1, epsilon subunit [Paracoccus sp. TRP]
          Length = 148

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 60/126 (47%), Gaps = 2/126 (1%)

Query: 17  YADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGV 76
            AD M F L S  +   +    ++V +P   G    +P H P +  L+PG++TV   +G 
Sbjct: 1   MADTMQFDLVSPERNLLSVA-AREVRLPGAEGDLTAMPGHAPAIVNLRPGLVTVVAADGT 59

Query: 77  SQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEA 136
             +  V+ G   +N + SV ++AE  HP   +      +++++A+  + +A    +  E 
Sbjct: 60  ETEFAVTGGFAEINGE-SVSLLAERGHPRAEMTQEVFNEMMAQARRRVETAKERESAGEE 118

Query: 137 QIAVEV 142
            +A  V
Sbjct: 119 LVAAAV 124


>gi|403221834|dbj|BAM39966.1| ATP synthase delta chain, mitochondrial [Theileria orientalis
           strain Shintoku]
          Length = 164

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 18/152 (11%)

Query: 10  TRLAR----RGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKP 65
           TRL R         ++ F+L S ++  YT   VK V +P + G F +   H P L+ LKP
Sbjct: 5   TRLLRFASSTSSGKELLFSLLSSHESLYTKVPVKNVTLPGYDGYFTVTAGHSPMLSTLKP 64

Query: 66  GVITV-YETEGVSQKIFVSSGTITV-------------NDDSSVQIIAEEAHPVDSLDAS 111
           GVI+   +      K F+SSG                 ++  +  ++  E  P+D LD  
Sbjct: 65  GVISFSLKDSNEVVKYFISSGFFVYKQLVFYLNNFYRSDESHTADVMGVEVVPLDQLDKD 124

Query: 112 AARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
            A  VL +  +E    +S+ AK +  +  ++ 
Sbjct: 125 RATSVLQEVLAETQGDTSQWAKVKTFLTQDLC 156


>gi|304398018|ref|ZP_07379893.1| ATP synthase F1, epsilon subunit [Pantoea sp. aB]
 gi|308188720|ref|YP_003932851.1| membrane-bound ATP synthase, F1 sector subunit epsilon [Pantoea
           vagans C9-1]
 gi|381403405|ref|ZP_09928089.1| F0F1 ATP synthase subunit epsilon [Pantoea sp. Sc1]
 gi|304354304|gb|EFM18676.1| ATP synthase F1, epsilon subunit [Pantoea sp. aB]
 gi|308059230|gb|ADO11402.1| membrane-bound ATP synthase, F1 sector, epsilon- subunit [Pantoea
           vagans C9-1]
 gi|380736604|gb|EIB97667.1| F0F1 ATP synthase subunit epsilon [Pantoea sp. Sc1]
          Length = 139

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V   SS  +
Sbjct: 21  VQKIQVSGSEGELGIFPGHAPLLTAIKPGMIRIVKQHGEEEYIYLSGGVLEVQPGSST-V 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  ++S         AS+E AKA A++ V
Sbjct: 80  LADTAIRGTDLDEARALEAKRKAEEHMNSSHGDVDYAQASAELAKAIAKLRV 131


>gi|227823625|ref|YP_002827598.1| F0F1 ATP synthase subunit epsilon [Sinorhizobium fredii NGR234]
 gi|254809378|sp|C3M9S0.1|ATPE_RHISN RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|227342627|gb|ACP26845.1| ATP synthase F1, epsilon subunit [Sinorhizobium fredii NGR234]
          Length = 134

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 2/114 (1%)

Query: 17  YADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGV 76
            AD  +F L S  ++   + +  +V +P+  G   ++ NH PT+  +KPGV+TV   +G 
Sbjct: 1   MADSFNFELVSPERLLL-SASATEVVIPATEGEMTVMANHAPTMTTVKPGVVTVKTADGK 59

Query: 77  SQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
           +++  V  G   +   +   ++AE A  VD LD +   + + +A++EL  A  E
Sbjct: 60  TERFAVFGGFADIL-PTGCTLLAESAVHVDELDRTVLENRIDEARAELEGAIDE 112


>gi|163761384|ref|ZP_02168458.1| ATP synthase subunit epsilon [Hoeflea phototrophica DFL-43]
 gi|162281379|gb|EDQ31676.1| ATP synthase subunit epsilon [Hoeflea phototrophica DFL-43]
          Length = 135

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           AD  +F L S  ++  +  +  +V +P   G   ++ +H PT+  +KPGV++V   EG +
Sbjct: 2   ADNFNFELVSPERLLLS-ASATEVVLPGTDGEMTVMAHHAPTMTTIKPGVVSVVTAEGAT 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           ++  V  G   +  D    ++AE A  V  +D       L  A+ +++ ASS+ AK +AQ
Sbjct: 61  ERYVVFGGFADILPDGCT-LLAESAVAVGDIDRDDLAQRLQDAREDVADASSDAAKQKAQ 119


>gi|149911799|ref|ZP_01900403.1| ATP synthase subunit epsilon [Moritella sp. PE36]
 gi|149805145|gb|EDM65167.1| ATP synthase subunit epsilon [Moritella sp. PE36]
          Length = 141

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 66/126 (52%), Gaps = 2/126 (1%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
            D  + S   V ++ +  + V +    G FGIL  H P L  + PG++ + +  G  + I
Sbjct: 5   FDLNVVSAEGVLFSGR-AESVQITGSGGEFGILAGHTPLLTGIVPGMVRLVKQHGEEEII 63

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           FVS GT  V     V ++A+ A   + LD + A++   +A+  L+++++       Q+AV
Sbjct: 64  FVSGGTCEVQ-PGEVTVLADTAIRAEDLDLAKAQEAKRQAEELLNNSATNQDVDYVQVAV 122

Query: 141 EVAEAL 146
           ++A+A+
Sbjct: 123 QLADAI 128


>gi|300024909|ref|YP_003757520.1| ATP synthase F1 subunit epsilon [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299526730|gb|ADJ25199.1| ATP synthase F1, epsilon subunit [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 132

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           A    F L S  +V  +  +  QV VP   G F +L  H P +A L+PGV+ V    G  
Sbjct: 2   AGTFKFELVSPERVLLS-IDADQVVVPGSDGEFAVLAGHAPVIATLRPGVLDV-TAGGSK 59

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASA 112
           +++FV SG   V D S + ++AE+A+ V+ L ASA
Sbjct: 60  RRLFVKSGFAEV-DPSRLTVLAEKAYDVEELSASA 93


>gi|329890938|ref|ZP_08269281.1| ATP synthase epsilon chain [Brevundimonas diminuta ATCC 11568]
 gi|328846239|gb|EGF95803.1| ATP synthase epsilon chain [Brevundimonas diminuta ATCC 11568]
          Length = 89

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 5/86 (5%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           A +++F+L +  +  +   +V QVD P   G FG+LP H P +  L+ GV+TVY  +G  
Sbjct: 2   AGKLNFSLVAPEREVFAG-SVDQVDAPGVEGDFGVLPGHAPFMTTLREGVVTVY--DGAQ 58

Query: 78  QKIF-VSSGTITVNDDSSVQIIAEEA 102
           ++ F V  G   VN +  + I+AEEA
Sbjct: 59  RRRFEVKGGFADVNGE-GLTILAEEA 83


>gi|440757726|ref|ZP_20936907.1| ATP synthase epsilon chain [Pantoea agglomerans 299R]
 gi|436428490|gb|ELP26146.1| ATP synthase epsilon chain [Pantoea agglomerans 299R]
          Length = 137

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V   SS  +
Sbjct: 19  VQKIQVSGSEGELGIFPGHAPLLTAIKPGMIRIVKQHGEEEYIYLSGGVLEVQPGSST-V 77

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  ++S         AS+E AKA A++ V
Sbjct: 78  LADTAIRGTDLDEARALEAKRKAEEHMNSSHGDVDYAQASAELAKAIAKLRV 129


>gi|323702637|ref|ZP_08114299.1| ATP synthase F1, epsilon subunit [Desulfotomaculum nigrificans DSM
           574]
 gi|323532456|gb|EGB22333.1| ATP synthase F1, epsilon subunit [Desulfotomaculum nigrificans DSM
           574]
          Length = 132

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 2/100 (2%)

Query: 44  PSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAH 103
           P   G  GILP H P +  LK GV+ V + +G   K+ VS G + V  +S V ++A+ A 
Sbjct: 27  PGADGELGILPEHAPLVTALKIGVMRV-QQDGKFFKVAVSGGFMEVK-NSRVVVLADTAE 84

Query: 104 PVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
             D +D   AR    +A+  L+S S E   A A+IA+  A
Sbjct: 85  RADEIDVERARAAKQRAEQRLASKSPEIDVARAEIALHKA 124


>gi|85712586|ref|ZP_01043633.1| F0F1-type ATP synthase, epsilon subunit [Idiomarina baltica OS145]
 gi|85693577|gb|EAQ31528.1| F0F1-type ATP synthase, epsilon subunit [Idiomarina baltica OS145]
          Length = 138

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 9/128 (7%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           ++  + S  +  +T   V+ V V    G  GI P H P L  +KPG++     EG  + +
Sbjct: 6   LNLEIVSAERRLFTG-VVQTVQVSGSEGELGIYPGHAPLLTKIKPGMVRFLSEEGQEELL 64

Query: 81  FVSSGTITVNDDSSVQI--IAEEAHPVDSLDASAAR----DVLSKAQSELSSAS--SETA 132
           +V+ G + V     + +  +A   H +D  +A AAR    + ++ + S+LS A   +E +
Sbjct: 65  YVAGGVLEVQPGQVIVLADVAVRGHELDEQEAEAARKRAEEAIADSGSDLSYAEAIAELS 124

Query: 133 KAEAQIAV 140
           +A AQ+ V
Sbjct: 125 RAMAQLEV 132


>gi|118590579|ref|ZP_01547981.1| F0F1 ATP synthase subunit epsilon [Stappia aggregata IAM 12614]
 gi|118437042|gb|EAV43681.1| F0F1 ATP synthase subunit epsilon [Stappia aggregata IAM 12614]
          Length = 135

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 6/134 (4%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           A+   F L S  +   + Q V +V VP   G FG+L NH P ++ + PG++ V    G  
Sbjct: 2   AELFQFELVSPERQLLSEQ-VAEVVVPGAEGEFGVLKNHAPFISTILPGILKVRGEAGGW 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
            + FV  G   V     + ++AE+A PV  +        +  AQ +++ A  + ++ +A+
Sbjct: 61  DEYFVRGGFADVA-AGGLTVLAEQAVPVGEISREQLDKAIQDAQEDVADAKDDASRQKAE 119

Query: 138 IAV----EVAEALK 147
           + +    +V EALK
Sbjct: 120 MTLAQLKDVVEALK 133


>gi|53721002|ref|YP_109988.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei
           K96243]
 gi|53724017|ref|YP_104463.1| ATP synthase F0F1 subunit epsilon [Burkholderia mallei ATCC 23344]
 gi|67643092|ref|ZP_00441841.1| ATP synthase F1, epsilon subunit [Burkholderia mallei GB8 horse 4]
 gi|76810572|ref|YP_331593.1| ATP synthase F0F1 subunit epsilon [Burkholderia pseudomallei 1710b]
 gi|121598820|ref|YP_994633.1| F0F1 ATP synthase subunit epsilon [Burkholderia mallei SAVP1]
 gi|124386193|ref|YP_001027566.1| ATP synthase F0F1 subunit epsilon [Burkholderia mallei NCTC 10229]
 gi|126438987|ref|YP_001060960.1| ATP synthase F0F1 subunit epsilon [Burkholderia pseudomallei 668]
 gi|126449201|ref|YP_001082536.1| ATP synthase F0F1 subunit epsilon [Burkholderia mallei NCTC 10247]
 gi|126453887|ref|YP_001068260.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 1106a]
 gi|134281647|ref|ZP_01768355.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei 305]
 gi|167000140|ref|ZP_02265963.1| ATP synthase F1, epsilon subunit [Burkholderia mallei PRL-20]
 gi|167721820|ref|ZP_02405056.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei DM98]
 gi|167740792|ref|ZP_02413566.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 14]
 gi|167818007|ref|ZP_02449687.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 91]
 gi|167826370|ref|ZP_02457841.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 9]
 gi|167847889|ref|ZP_02473397.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei B7210]
 gi|167896447|ref|ZP_02483849.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 7894]
 gi|167904848|ref|ZP_02492053.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei NCTC
           13177]
 gi|167913126|ref|ZP_02500217.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 112]
 gi|167921064|ref|ZP_02508155.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei
           BCC215]
 gi|217424043|ref|ZP_03455543.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei 576]
 gi|226193128|ref|ZP_03788738.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei
           Pakistan 9]
 gi|237814344|ref|YP_002898795.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei
           MSHR346]
 gi|242314852|ref|ZP_04813868.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei 1106b]
 gi|254175070|ref|ZP_04881731.1| ATP synthase F1, epsilon subunit [Burkholderia mallei ATCC 10399]
 gi|254184021|ref|ZP_04890612.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei 1655]
 gi|254186487|ref|ZP_04893004.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei Pasteur
           52237]
 gi|254194733|ref|ZP_04901164.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei S13]
 gi|254201538|ref|ZP_04907902.1| ATP synthase F1, epsilon subunit [Burkholderia mallei FMH]
 gi|254206874|ref|ZP_04913225.1| ATP synthase F1, epsilon subunit [Burkholderia mallei JHU]
 gi|254258142|ref|ZP_04949196.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei 1710a]
 gi|254298705|ref|ZP_04966156.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei 406e]
 gi|254357428|ref|ZP_04973702.1| ATP synthase F1, epsilon subunit [Burkholderia mallei 2002721280]
 gi|386863695|ref|YP_006276644.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 1026b]
 gi|403520676|ref|YP_006654810.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei
           BPC006]
 gi|418394743|ref|ZP_12968838.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 354a]
 gi|418537314|ref|ZP_13102954.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 1026a]
 gi|418542358|ref|ZP_13107797.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 1258a]
 gi|418548841|ref|ZP_13113939.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 1258b]
 gi|418554849|ref|ZP_13119610.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 354e]
 gi|60389510|sp|Q62FR4.1|ATPE_BURMA RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|60389520|sp|Q63PI1.1|ATPE_BURPS RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|119361416|sp|Q3JXW0.1|ATPE_BURP1 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|166222436|sp|A3MQK0.1|ATPE_BURM7 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|166222437|sp|A2S6J7.1|ATPE_BURM9 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|166222438|sp|A1V8T0.1|ATPE_BURMS RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|166222439|sp|A3P0Y9.1|ATPE_BURP0 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|166222440|sp|A3NF39.1|ATPE_BURP6 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|52211416|emb|CAH37407.1| ATP synthase epsilon chain [Burkholderia pseudomallei K96243]
 gi|52427440|gb|AAU48033.1| ATP synthase F1, epsilon subunit [Burkholderia mallei ATCC 23344]
 gi|76580025|gb|ABA49500.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei 1710b]
 gi|121227630|gb|ABM50148.1| ATP synthase F1, epsilon subunit [Burkholderia mallei SAVP1]
 gi|124294213|gb|ABN03482.1| ATP synthase F1, epsilon subunit [Burkholderia mallei NCTC 10229]
 gi|126218480|gb|ABN81986.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei 668]
 gi|126227529|gb|ABN91069.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei 1106a]
 gi|126242071|gb|ABO05164.1| ATP synthase F1, epsilon subunit [Burkholderia mallei NCTC 10247]
 gi|134247314|gb|EBA47400.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei 305]
 gi|147747432|gb|EDK54508.1| ATP synthase F1, epsilon subunit [Burkholderia mallei FMH]
 gi|147752416|gb|EDK59482.1| ATP synthase F1, epsilon subunit [Burkholderia mallei JHU]
 gi|148026492|gb|EDK84577.1| ATP synthase F1, epsilon subunit [Burkholderia mallei 2002721280]
 gi|157808570|gb|EDO85740.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei 406e]
 gi|157934172|gb|EDO89842.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei Pasteur
           52237]
 gi|160696115|gb|EDP86085.1| ATP synthase F1, epsilon subunit [Burkholderia mallei ATCC 10399]
 gi|169651483|gb|EDS84176.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei S13]
 gi|184214553|gb|EDU11596.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei 1655]
 gi|217393106|gb|EEC33128.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei 576]
 gi|225934728|gb|EEH30705.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei
           Pakistan 9]
 gi|237504520|gb|ACQ96838.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei
           MSHR346]
 gi|238524341|gb|EEP87774.1| ATP synthase F1, epsilon subunit [Burkholderia mallei GB8 horse 4]
 gi|242138091|gb|EES24493.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei 1106b]
 gi|243063943|gb|EES46129.1| ATP synthase F1, epsilon subunit [Burkholderia mallei PRL-20]
 gi|254216831|gb|EET06215.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei 1710a]
 gi|385350023|gb|EIF56575.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 1026a]
 gi|385355750|gb|EIF61911.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 1258a]
 gi|385357059|gb|EIF63138.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 1258b]
 gi|385369593|gb|EIF74906.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 354e]
 gi|385374664|gb|EIF79503.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 354a]
 gi|385660823|gb|AFI68246.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 1026b]
 gi|403076318|gb|AFR17898.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei
           BPC006]
          Length = 141

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 60/108 (55%), Gaps = 3/108 (2%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  +G  GILP H P +  ++PG + +    G  + +FV+ G + V    +V ++
Sbjct: 21  KFVALPGEAGELGILPGHTPLITRIRPGAVRIESESGDEEFVFVAGGILEVQ-PGAVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASSET--AKAEAQIAVEVAE 144
           A+ A     LDA+ A +   +A+  L +A S+   AKA++++A  +A+
Sbjct: 80  ADTAIRGKDLDAAKAEEARKRAEETLQNAKSDIDLAKAQSELATAMAQ 127


>gi|83718437|ref|YP_443799.1| F0F1 ATP synthase subunit epsilon [Burkholderia thailandensis E264]
 gi|167582833|ref|ZP_02375707.1| F0F1 ATP synthase subunit epsilon [Burkholderia thailandensis
           TXDOH]
 gi|167620973|ref|ZP_02389604.1| F0F1 ATP synthase subunit epsilon [Burkholderia thailandensis Bt4]
 gi|119361418|sp|Q2STF0.1|ATPE_BURTA RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|83652262|gb|ABC36325.1| ATP synthase F1, epsilon subunit [Burkholderia thailandensis E264]
          Length = 141

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 60/108 (55%), Gaps = 3/108 (2%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  +G  GILP H P +  ++PG + +    G  + +FV+ G + V    +V ++
Sbjct: 21  KFVALPGEAGELGILPGHTPLITRIRPGAVRIEAESGDEEFVFVAGGILEVQ-PGAVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASSET--AKAEAQIAVEVAE 144
           A+ A     LDA+ A +   +A+  L +A S+   AKA++++A  +A+
Sbjct: 80  ADTAIRGKDLDAAKAEEARKRAEETLQNAKSDIDLAKAQSELATAMAQ 127


>gi|120600834|ref|YP_965408.1| F0F1 ATP synthase subunit epsilon [Shewanella sp. W3-18-1]
 gi|146295035|ref|YP_001185459.1| F0F1 ATP synthase subunit epsilon [Shewanella putrefaciens CN-32]
 gi|386315928|ref|YP_006012093.1| ATP synthase F1 subunit epsilon [Shewanella putrefaciens 200]
 gi|166222495|sp|A4YCH7.1|ATPE_SHEPC RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|166222497|sp|A1RQA9.1|ATPE_SHESW RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|120560927|gb|ABM26854.1| ATP synthase F1, epsilon subunit [Shewanella sp. W3-18-1]
 gi|145566725|gb|ABP77660.1| ATP synthase F1, epsilon subunit [Shewanella putrefaciens CN-32]
 gi|319428553|gb|ADV56627.1| ATP synthase F1, epsilon subunit [Shewanella putrefaciens 200]
          Length = 142

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 12/121 (9%)

Query: 29  NKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTIT 88
           N +F     V  + V    G  GILP H P L  +KPG+  + + +G  + I++S G + 
Sbjct: 15  NSIF--KGRVACLQVTGVEGELGILPGHAPLLTTIKPGMARIIKQDGSEEVIYLSGGFLE 72

Query: 89  VNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASS---------ETAKAEAQIA 139
           V  + S+ ++A+     D +D  AA +   +A++ ++ A +         E AKA AQ+ 
Sbjct: 73  VQPN-SIAVLADVVMRADEIDEQAALEAKRRAEAHMADAGADFDYDAAMVELAKAMAQLR 131

Query: 140 V 140
           V
Sbjct: 132 V 132


>gi|300719161|ref|YP_003743964.1| ATP synthase F1 complex subunit epsilon [Erwinia billingiae Eb661]
 gi|299064997|emb|CAX62117.1| ATP synthase, F1 complex, epsilon subunit [Erwinia billingiae
           Eb661]
          Length = 139

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+ + V    G  GI PNH P L  +KPG++ + + +G  + I++S G + V    +V +
Sbjct: 21  VQSIQVSGTEGELGIRPNHAPLLTAIKPGMVHIVKQQGEEEYIYLSGGVLEVQ-PGAVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  ++S         AS+E AKA A++ V
Sbjct: 80  LADTAIRGTDLDEARAMEAKRKAEEHMNSSHGDVDFATASAELAKAIAKLRV 131


>gi|170766875|ref|ZP_02901328.1| ATP synthase F1, epsilon subunit [Escherichia albertii TW07627]
 gi|170124313|gb|EDS93244.1| ATP synthase F1, epsilon subunit [Escherichia albertii TW07627]
          Length = 139

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 21  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQ-PGNVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  ++S         AS+E AKA AQ+ V
Sbjct: 80  LADTAIRGQDLDEARAMEAKRKAEEHINSSHGDVDYAQASAELAKAIAQLRV 131


>gi|167838423|ref|ZP_02465282.1| F0F1 ATP synthase subunit epsilon [Burkholderia thailandensis
           MSMB43]
 gi|424901543|ref|ZP_18325059.1| F0F1 ATP synthase subunit epsilon [Burkholderia thailandensis
           MSMB43]
 gi|390931918|gb|EIP89318.1| F0F1 ATP synthase subunit epsilon [Burkholderia thailandensis
           MSMB43]
          Length = 141

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 60/108 (55%), Gaps = 3/108 (2%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  +G  GILP H P +  ++PG + +    G  + +FV+ G + V    +V ++
Sbjct: 21  KFVALPGEAGELGILPGHTPLITRIRPGAVRIEAESGDEEFVFVAGGILEVQ-PGAVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASSET--AKAEAQIAVEVAE 144
           A+ A     LDA+ A +   +A+  L +A S+   AKA++++A  +A+
Sbjct: 80  ADTAIRGKDLDAAKAEEARKRAEETLQNAKSDIDLAKAQSELATAMAQ 127


>gi|150398118|ref|YP_001328585.1| F0F1 ATP synthase subunit epsilon [Sinorhizobium medicae WSM419]
 gi|166222498|sp|A6UDM0.1|ATPE_SINMW RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|150029633|gb|ABR61750.1| ATP synthase F1, epsilon subunit [Sinorhizobium medicae WSM419]
          Length = 134

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 69/136 (50%), Gaps = 2/136 (1%)

Query: 17  YADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGV 76
            A+  +F L S  ++  + + V +V +P+  G   ++ NH PT+  ++PGV+ V    G 
Sbjct: 1   MAETFNFELVSPERLLVS-ETVTEVVIPATEGEMTVMANHAPTMTTVRPGVVAVKTAAGN 59

Query: 77  SQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEA 136
           +++  V  G   +   +   ++AE A  VD LD++   + +  A++EL  AS E      
Sbjct: 60  TERYAVFGGFADIL-PTGCTLLAESAVHVDELDSTVLENRIEAARAELEGASDEKKTRLE 118

Query: 137 QIAVEVAEALKIFVSS 152
           Q+  E+ +  +I + +
Sbjct: 119 QLVAELTKLGEIVIPA 134


>gi|167588246|ref|ZP_02380634.1| ATP synthase F1, epsilon subunit [Burkholderia ubonensis Bu]
          Length = 149

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 2/94 (2%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETE-GVSQKIFVSSGTITVNDDSSVQI 97
           + V VP  SG  GI P H P    L+PGV+TV + + G  ++I V+ G + V+ D  V +
Sbjct: 19  RAVTVPGESGELGIHPRHAPLFTRLRPGVVTVTDAKTGEHRRILVAGGVLEVSRD-GVTL 77

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSSASSET 131
           IA+ A     LDA  AR+  + A       + E+
Sbjct: 78  IADHALRTPELDALRAREARNAANDWRRRYAQES 111


>gi|41039|emb|CAA23528.1| unnamed protein product [Escherichia coli]
          Length = 133

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 10/110 (9%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 21  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQ-PGNVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQI 138
           +A+ A     LD + A +   KA+  +SS         AS+E AKA AQ+
Sbjct: 80  LADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELAKAIAQL 129


>gi|197120310|ref|YP_002140737.1| F0F1 ATP synthase subunit epsilon [Geobacter bemidjiensis Bem]
 gi|226740258|sp|B5EFI6.1|ATPE_GEOBB RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|197089670|gb|ACH40941.1| ATP synthase F1, epsilon subunit [Geobacter bemidjiensis Bem]
          Length = 138

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 2/83 (2%)

Query: 48  GAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDS 107
           G FG+LP H P L  LK G +  Y  +GVS  + ++ G   V +D +V ++ E A   D 
Sbjct: 31  GEFGVLPGHAPFLTSLKIGELA-YRKDGVSHHMALNWGYFEVEND-TVTVLVETAEKADE 88

Query: 108 LDASAARDVLSKAQSELSSASSE 130
           +D   A+  L +A++EL   + E
Sbjct: 89  IDLERAKAALGRAETELKGLTPE 111


>gi|163850894|ref|YP_001638937.1| F0F1 ATP synthase subunit epsilon [Methylobacterium extorquens PA1]
 gi|218529717|ref|YP_002420533.1| F0F1 ATP synthase subunit epsilon [Methylobacterium extorquens CM4]
 gi|240138024|ref|YP_002962496.1| ATP synthase F1 sector epsilon subunit [Methylobacterium extorquens
           AM1]
 gi|254560585|ref|YP_003067680.1| ATP synthase F1 sector subunit epsilon [Methylobacterium extorquens
           DM4]
 gi|418058335|ref|ZP_12696310.1| ATP synthase epsilon chain [Methylobacterium extorquens DSM 13060]
 gi|163662499|gb|ABY29866.1| ATP synthase F1, epsilon subunit [Methylobacterium extorquens PA1]
 gi|218522020|gb|ACK82605.1| ATP synthase F1, epsilon subunit [Methylobacterium extorquens CM4]
 gi|240007993|gb|ACS39219.1| ATP synthase F1 sector epsilon subunit [Methylobacterium extorquens
           AM1]
 gi|254267863|emb|CAX23729.1| ATP synthase F1 sector epsilon subunit [Methylobacterium extorquens
           DM4]
 gi|373568067|gb|EHP94021.1| ATP synthase epsilon chain [Methylobacterium extorquens DSM 13060]
          Length = 133

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 5/115 (4%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F      +  Y+ + V+ V +P   G   +LP H P L  LK GVITV ET G   +I+V
Sbjct: 6   FDFVGPERTLYSGE-VEAVQLPGSEGEMTVLPGHAPVLTTLKVGVITVTETTGNGMRIYV 64

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAA-RDVLSKAQSELSSASSETAKAEA 136
             G   +    SV ++AE A P++ +      R++  +A   +  A+ + AK EA
Sbjct: 65  QGGFADIG-PKSVTVLAERAAPIEEVTPGMIDREI--EAVELVRDATQDLAKREA 116


>gi|384214127|ref|YP_005605290.1| ATP synthase subunit epsilon [Bradyrhizobium japonicum USDA 6]
 gi|354953023|dbj|BAL05702.1| ATP synthase epsilon chain [Bradyrhizobium japonicum USDA 6]
          Length = 135

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 7/127 (5%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           + F L S  K+ ++ + V QVD+P   G FG+L  H P +A ++PG++TV  T G   KI
Sbjct: 4   IHFDLVSPEKLAFSGE-VDQVDIPGVEGDFGVLAGHAPVVAAIRPGILTVT-TGGRPVKI 61

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
            V  G   V+ +  + ++A+ A  +D LD    R   +   SE+     E    E   A+
Sbjct: 62  IVLGGLAEVS-EKGLTVLADVATSLDELD----RAQFAATISEMEEGLKEHEGDELDQAI 116

Query: 141 EVAEALK 147
           E  +  K
Sbjct: 117 ERLDHFK 123


>gi|336425978|ref|ZP_08605992.1| ATP synthase F1, epsilon subunit [Lachnospiraceae bacterium
           3_1_57FAA_CT1]
 gi|336011443|gb|EGN41403.1| ATP synthase F1, epsilon subunit [Lachnospiraceae bacterium
           3_1_57FAA_CT1]
          Length = 134

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 5/130 (3%)

Query: 18  ADQMDFTLA--SGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEG 75
           A+  +FTL   +  ++FY    V  V+  +  GA GI   H+P   ++KPG++T+   EG
Sbjct: 2   AEDRNFTLKIITPERIFYEGP-VSMVEFNTTEGAIGIYKGHIPMTVMIKPGILTITTEEG 60

Query: 76  VSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAE 135
             ++  + +G + +  D  V ++AE     + +D + A+  L +A+  +    S T  A 
Sbjct: 61  -RREAALHAGFVEILQD-KVTVLAEVVEWPEEIDENRAKAALERAEERIKRHESNTDLAR 118

Query: 136 AQIAVEVAEA 145
           A+ A+E A A
Sbjct: 119 AETALERAMA 128


>gi|322835103|ref|YP_004215130.1| ATP synthase F1 subunit epsilon [Rahnella sp. Y9602]
 gi|384260326|ref|YP_005404260.1| F0F1 ATP synthase subunit epsilon [Rahnella aquatilis HX2]
 gi|321170304|gb|ADW76003.1| ATP synthase F1, epsilon subunit [Rahnella sp. Y9602]
 gi|380756302|gb|AFE60693.1| F0F1 ATP synthase subunit epsilon [Rahnella aquatilis HX2]
          Length = 140

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 11/123 (8%)

Query: 27  SGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGT 86
           S  K  +T   V+++ V    G  GI P H P L  +KPG++ + +  G  + I++S G 
Sbjct: 12  SAEKRMFTGM-VQKIQVTGSEGELGIFPGHAPLLTAIKPGMVRIVKEHGEEEYIYLSGGI 70

Query: 87  ITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQ 137
           + V  +++  ++A+ A     LD + A +   KA+  +S          AS+E AKA A+
Sbjct: 71  LEVQPNATT-VLADTAIRGQDLDEARALEAKRKAEEHISGSHGDVDYAQASAELAKAIAK 129

Query: 138 IAV 140
           + V
Sbjct: 130 LRV 132


>gi|373466427|ref|ZP_09557743.1| ATP synthase F1, epsilon subunit [Haemophilus sp. oral taxon 851
           str. F0397]
 gi|371760535|gb|EHO49217.1| ATP synthase F1, epsilon subunit [Haemophilus sp. oral taxon 851
           str. F0397]
          Length = 142

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 2/110 (1%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
            + T+ S  +  +  + VKQ+      G  GILP H P L  +KPG++     +G  + I
Sbjct: 4   FNLTIVSAERKIFEGE-VKQIQATGVEGELGILPGHTPLLTAIKPGIVKFTLQDGNEEVI 62

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
           +VS G + V  +  V ++A+ A     LDA   R+   KA+  + S +S+
Sbjct: 63  YVSGGFLEVQPN-VVTVLADVAIRGSELDADRIREAKRKAEENIVSHASD 111


>gi|408789832|ref|ZP_11201473.1| ATP synthase epsilon chain [Lactobacillus florum 2F]
 gi|408520854|gb|EKK20876.1| ATP synthase epsilon chain [Lactobacillus florum 2F]
          Length = 141

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 5/99 (5%)

Query: 33  YTNQNVKQVDVPSFSGAFGILPNHVPTLAILK--PGVITVYETEGVSQKIFVSSGTITVN 90
           YTNQNV+   V + SG  GI+PNH+P +A LK  P +    + +  S  + V+ G I  +
Sbjct: 19  YTNQNVELAVVQTKSGDLGIMPNHIPVIAALKIAPAIFKFGDQQ--SDILAVNGGFIEFS 76

Query: 91  DDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASS 129
           ++  + I+A+ A P + +D + A +   +A+ EL  A +
Sbjct: 77  NN-ELTIVADSAEPKNKIDVNRAANAKERAEHELEKARN 114


>gi|300932366|ref|ZP_07147631.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 187-1]
 gi|300459871|gb|EFK23364.1| ATP synthase F1, epsilon subunit [Escherichia coli MS 187-1]
          Length = 139

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 21  VEKIQVTGSEGELGISPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQ-PGNVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  +SS         AS+E AKA AQ+ V
Sbjct: 80  LADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELAKAIAQLRV 131


>gi|78064766|ref|YP_367535.1| ATP synthase F0F1 subunit epsilon [Burkholderia sp. 383]
 gi|107024490|ref|YP_622817.1| F0F1 ATP synthase subunit epsilon [Burkholderia cenocepacia AU
           1054]
 gi|115350154|ref|YP_771993.1| F0F1 ATP synthase subunit epsilon [Burkholderia ambifaria AMMD]
 gi|116688131|ref|YP_833754.1| F0F1 ATP synthase subunit epsilon [Burkholderia cenocepacia HI2424]
 gi|170699475|ref|ZP_02890518.1| ATP synthase F1, epsilon subunit [Burkholderia ambifaria IOP40-10]
 gi|170731478|ref|YP_001763425.1| F0F1 ATP synthase subunit epsilon [Burkholderia cenocepacia MC0-3]
 gi|171315825|ref|ZP_02905056.1| ATP synthase F1, epsilon subunit [Burkholderia ambifaria MEX-5]
 gi|172059173|ref|YP_001806825.1| F0F1 ATP synthase subunit epsilon [Burkholderia ambifaria MC40-6]
 gi|254246699|ref|ZP_04940020.1| H+-transporting two-sector ATPase, delta/epsilon subunit
           [Burkholderia cenocepacia PC184]
 gi|402564912|ref|YP_006614257.1| AtpC protein [Burkholderia cepacia GG4]
 gi|421866791|ref|ZP_16298454.1| ATP synthase epsilon chain [Burkholderia cenocepacia H111]
 gi|119361395|sp|Q1BRB1.1|ATPE1_BURCA RecName: Full=ATP synthase epsilon chain 1; AltName: Full=ATP
           synthase F1 sector epsilon subunit 1; AltName:
           Full=F-ATPase epsilon subunit 1
 gi|119361417|sp|Q39KX5.1|ATPE_BURS3 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|122324406|sp|Q0BJL4.1|ATPE_BURCM RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|226740228|sp|B1YQL5.1|ATPE_BURA4 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|77965511|gb|ABB06891.1| ATP synthase F1 subcomplex epsilon subunit [Burkholderia sp. 383]
 gi|105894679|gb|ABF77844.1| ATP synthase F1 subcomplex epsilon subunit [Burkholderia
           cenocepacia AU 1054]
 gi|115280142|gb|ABI85659.1| ATP synthase F1 subcomplex epsilon subunit [Burkholderia ambifaria
           AMMD]
 gi|116646220|gb|ABK06861.1| ATP synthase F1 subcomplex epsilon subunit [Burkholderia
           cenocepacia HI2424]
 gi|124871475|gb|EAY63191.1| H+-transporting two-sector ATPase, delta/epsilon subunit
           [Burkholderia cenocepacia PC184]
 gi|169814720|gb|ACA89303.1| ATP synthase F1, epsilon subunit [Burkholderia cenocepacia MC0-3]
 gi|170135624|gb|EDT03909.1| ATP synthase F1, epsilon subunit [Burkholderia ambifaria IOP40-10]
 gi|171099014|gb|EDT43799.1| ATP synthase F1, epsilon subunit [Burkholderia ambifaria MEX-5]
 gi|171991690|gb|ACB62609.1| ATP synthase F1, epsilon subunit [Burkholderia ambifaria MC40-6]
 gi|358073276|emb|CCE49332.1| ATP synthase epsilon chain [Burkholderia cenocepacia H111]
 gi|402246109|gb|AFQ46563.1| AtpC protein [Burkholderia cepacia GG4]
          Length = 141

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 60/108 (55%), Gaps = 3/108 (2%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  +G  GILP H P +  ++PG + +    G  + +FV+ G + V    +V ++
Sbjct: 21  KFVALPGETGELGILPGHTPLITRIRPGAVRIEVEGGNDEFVFVAGGILEVQ-PGAVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASS--ETAKAEAQIAVEVAE 144
           A+ A     LDA+ A +   +A+  L +A S  + AKA++++A  +A+
Sbjct: 80  ADTAIRGKDLDAAKAEEARKRAEETLQNAKSDLDLAKAQSELATAMAQ 127


>gi|161523287|ref|YP_001578299.1| F0F1 ATP synthase subunit epsilon [Burkholderia multivorans ATCC
           17616]
 gi|189351940|ref|YP_001947568.1| F0F1 ATP synthase subunit epsilon [Burkholderia multivorans ATCC
           17616]
 gi|221214287|ref|ZP_03587259.1| ATP synthase F1, epsilon subunit [Burkholderia multivorans CGD1]
 gi|421470095|ref|ZP_15918502.1| ATP synthase F1, epsilon subunit [Burkholderia multivorans ATCC
           BAA-247]
 gi|421477535|ref|ZP_15925355.1| ATP synthase F1, epsilon subunit [Burkholderia multivorans CF2]
 gi|226740230|sp|A9AJG5.1|ATPE_BURM1 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|160340716|gb|ABX13802.1| ATP synthase F1, epsilon subunit [Burkholderia multivorans ATCC
           17616]
 gi|189335962|dbj|BAG45032.1| F-type H+-transporting ATPase epsilon chain [Burkholderia
           multivorans ATCC 17616]
 gi|221165942|gb|EED98416.1| ATP synthase F1, epsilon subunit [Burkholderia multivorans CGD1]
 gi|400226390|gb|EJO56468.1| ATP synthase F1, epsilon subunit [Burkholderia multivorans CF2]
 gi|400228513|gb|EJO58442.1| ATP synthase F1, epsilon subunit [Burkholderia multivorans ATCC
           BAA-247]
          Length = 141

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 60/108 (55%), Gaps = 3/108 (2%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  +G  GILP H P +  ++PG + +    G  + +FV+ G + V    +V ++
Sbjct: 21  KFVALPGETGELGILPGHTPLITRIRPGAVRIEVEGGSDEFVFVAGGILEVQ-PGAVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASS--ETAKAEAQIAVEVAE 144
           A+ A     LDA+ A +   +A+  L +A S  + AKA++++A  +A+
Sbjct: 80  ADTAIRGKDLDAAKAEEARKRAEETLQNAKSDLDLAKAQSELATAMAQ 127


>gi|420101066|ref|ZP_14612201.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O111:H11 str.
           CVM9455]
 gi|394418349|gb|EJE92028.1| F0F1 ATP synthase subunit epsilon [Escherichia coli O111:H11 str.
           CVM9455]
          Length = 139

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 21  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQ-PGNVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSSA---------SSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  +SS+         S+E AKA AQ+ V
Sbjct: 80  LADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQTSAELAKAIAQLRV 131


>gi|254470761|ref|ZP_05084164.1| ATP synthase F1, epsilon subunit [Pseudovibrio sp. JE062]
 gi|374328984|ref|YP_005079168.1| ATP synthase subunit epsilon [Pseudovibrio sp. FO-BEG1]
 gi|211959903|gb|EEA95100.1| ATP synthase F1, epsilon subunit [Pseudovibrio sp. JE062]
 gi|359341772|gb|AEV35146.1| ATP synthase epsilon chain [Pseudovibrio sp. FO-BEG1]
          Length = 135

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 6/134 (4%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           A+   F L S  ++  + + V  V VP   G FG+   H P L+ ++PGV+     +G  
Sbjct: 2   AEAFQFELVSPERLLLSAK-VTDVTVPGSEGEFGVGAGHSPFLSTMRPGVVKALSEDGSK 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
              FV  G   V+  S + ++AE+A P+  LDA      +  A  +++ A  E A+  A+
Sbjct: 61  HDYFVRGGFADVS-ASGMTVLAEQAIPMADLDAGYIAQQIQDASEDVADAKDEDARQAAR 119

Query: 138 IAV----EVAEALK 147
           + +    E+  ALK
Sbjct: 120 LVLSQLQELQAALK 133


>gi|299135453|ref|ZP_07028643.1| ATP synthase F1, epsilon subunit [Afipia sp. 1NLS2]
 gi|298589861|gb|EFI50066.1| ATP synthase F1, epsilon subunit [Afipia sp. 1NLS2]
          Length = 137

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 3/96 (3%)

Query: 17  YADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGV 76
            A+   F L S  K+ ++ + V+QVDVP   G FG+L  H P +A ++PG++TV    G 
Sbjct: 1   MANTFHFDLVSPEKIAFSGE-VEQVDVPGVEGDFGVLAGHSPLVASIRPGILTVT-VGGK 58

Query: 77  SQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASA 112
           ++KI V  G   V+ D  + ++A+ A  +  LD  A
Sbjct: 59  NEKIIVLGGLAEVS-DKGLTVLADTATSLAELDRVA 93


>gi|56697993|ref|YP_168364.1| ATP synthase F0F1 subunit epsilon [Ruegeria pomeroyi DSS-3]
 gi|81676123|sp|Q5LNP2.1|ATPE_SILPO RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|56679730|gb|AAV96396.1| ATP synthase F1, epsilon subunit [Ruegeria pomeroyi DSS-3]
          Length = 136

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 71/133 (53%), Gaps = 9/133 (6%)

Query: 17  YADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGV 76
            A+ M F L S  ++  + Q V  V +P   G    +P+H PT+  L+PGV+ V   EG 
Sbjct: 1   MANTMQFDLVSPERLLASLQ-VSAVQIPGADGDMTAMPDHAPTITTLRPGVLKVEGPEGT 59

Query: 77  SQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEA 136
           S+ + V+ G   +  D S+ ++AE+A PV  +  +   +++++A+S     S E AK + 
Sbjct: 60  SEYL-VTGGFAQIGAD-SLSVLAEKAIPVTEVTRAHLDELIAEARS-----SHEAAKGQE 112

Query: 137 QIAVEVAEALKIF 149
             +V V +A K+ 
Sbjct: 113 HTSV-VDDAAKLL 124


>gi|372277356|ref|ZP_09513392.1| F0F1 ATP synthase subunit epsilon [Pantoea sp. SL1_M5]
 gi|390437505|ref|ZP_10226043.1| F0F1 ATP synthase subunit epsilon [Pantoea agglomerans IG1]
          Length = 139

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V   SS  +
Sbjct: 21  VQKIQVSGSEGELGIFPGHAPLLTAIKPGMIRIVKQHGEEEFIYLSGGVLEVQPGSST-V 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  ++S         AS+E AKA A++ V
Sbjct: 80  LADTAIRGTDLDEARALEAKRKAEDHMNSSHGDVDYAQASAELAKAIAKLRV 131


>gi|296446168|ref|ZP_06888116.1| ATP synthase F1, epsilon subunit [Methylosinus trichosporium OB3b]
 gi|296256362|gb|EFH03441.1| ATP synthase F1, epsilon subunit [Methylosinus trichosporium OB3b]
          Length = 132

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 6/125 (4%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F L S  K+ +  + V+ V  P   G F +L +H P + +LKPGV+ + +  G   ++FV
Sbjct: 6   FELVSPEKLLFAGE-VEAVVAPGADGQFTVLKDHAPLMTVLKPGVVEI-DDAGKKDRLFV 63

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEV 142
             G   V   S   I+AE A PV  LDA+     +  A  +++ A ++ A+   ++A E 
Sbjct: 64  RGGFADVGL-SGFTILAEYAIPVAELDAAKIDADIKNAGEDVADAKTDEAR---RLAAEK 119

Query: 143 AEALK 147
            + LK
Sbjct: 120 LDQLK 124


>gi|334317788|ref|YP_004550407.1| ATP synthase subunit epsilon [Sinorhizobium meliloti AK83]
 gi|384530912|ref|YP_005715000.1| ATP synthase subunit epsilon [Sinorhizobium meliloti BL225C]
 gi|384537625|ref|YP_005721710.1| probabable ATP synthase subunit epsilon [Sinorhizobium meliloti
           SM11]
 gi|407722098|ref|YP_006841760.1| F0F1 ATP synthase subunit epsilon [Sinorhizobium meliloti Rm41]
 gi|418401821|ref|ZP_12975344.1| F0F1 ATP synthase subunit epsilon [Sinorhizobium meliloti
           CCNWSX0020]
 gi|433614860|ref|YP_007191658.1| ATP synthase, F1 epsilon subunit (delta in mitochondria)
           [Sinorhizobium meliloti GR4]
 gi|20137399|sp|Q92LK9.2|ATPE_RHIME RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|333813088|gb|AEG05757.1| ATP synthase epsilon chain [Sinorhizobium meliloti BL225C]
 gi|334096782|gb|AEG54793.1| ATP synthase epsilon chain [Sinorhizobium meliloti AK83]
 gi|336034517|gb|AEH80449.1| probabable ATP synthase subunit epsilon [Sinorhizobium meliloti
           SM11]
 gi|359504233|gb|EHK76772.1| F0F1 ATP synthase subunit epsilon [Sinorhizobium meliloti
           CCNWSX0020]
 gi|407320330|emb|CCM68934.1| F0F1 ATP synthase subunit epsilon [Sinorhizobium meliloti Rm41]
 gi|429553050|gb|AGA08059.1| ATP synthase, F1 epsilon subunit (delta in mitochondria)
           [Sinorhizobium meliloti GR4]
          Length = 134

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 2/135 (1%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           A+  +F L S  ++   ++ V +V +P+  G   ++ NH PT+  +KPGV+ V    G +
Sbjct: 2   AESFNFELVSPERLL-VSEKVTEVVIPATEGEMTVMANHAPTMTTIKPGVVAVKTAAGKT 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           ++  V  G   +   S   ++AE A  VD LD +   + +  A++EL  A  E      Q
Sbjct: 61  ERYAVFGGFADIL-PSGCTLLAESAVHVDELDPTVLENRIEAARAELEGAGDEKKTRLEQ 119

Query: 138 IAVEVAEALKIFVSS 152
              E+ +  +I + +
Sbjct: 120 FIAELTKLGEIVIPA 134


>gi|15896118|ref|NP_349467.1| ATP synthase F0F1 subunit epsilon [Clostridium acetobutylicum ATCC
           824]
 gi|337738072|ref|YP_004637519.1| ATP synthase F0F1 subunit epsilon [Clostridium acetobutylicum DSM
           1731]
 gi|384459583|ref|YP_005672003.1| FoF1-type ATP synthase epsilon subunit [Clostridium acetobutylicum
           EA 2018]
 gi|17372693|sp|Q9Z686.1|ATPE_CLOAB RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|15025910|gb|AAK80807.1|AE007784_4 FoF1-type ATP synthase epsilon subunit [Clostridium acetobutylicum
           ATCC 824]
 gi|4323569|gb|AAD16427.1| ATP synthase subunit epsilon [Clostridium acetobutylicum ATCC 824]
 gi|325510272|gb|ADZ21908.1| FoF1-type ATP synthase epsilon subunit [Clostridium acetobutylicum
           EA 2018]
 gi|336292262|gb|AEI33396.1| F0F1 ATP synthase subunit epsilon [Clostridium acetobutylicum DSM
           1731]
          Length = 133

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 57/112 (50%), Gaps = 2/112 (1%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           A+ +  ++ +  K FY   +VK++   +  G  GILPNH   +A L P    + E +G  
Sbjct: 2   ANNIKLSILTPQKTFYVG-DVKEIITRTVEGEIGILPNHTDLVAFLTPTETILVEEDGSR 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASS 129
           +K+F S+G + V  +S V  + + +   D +D   A     +A+  L ++++
Sbjct: 61  KKVFTSTGILNVG-ESEVSFMCDASEWPDEIDIQRAETAKERAEKRLKTSNN 111


>gi|417840359|ref|ZP_12486497.1| ATP synthase epsilon chain [Haemophilus haemolyticus M19107]
 gi|417841917|ref|ZP_12488014.1| ATP synthase epsilon chain [Haemophilus haemolyticus M19501]
 gi|417845904|ref|ZP_12491922.1| ATP synthase epsilon chain [Haemophilus haemolyticus M21639]
 gi|419838590|ref|ZP_14362013.1| ATP synthase F1, epsilon subunit [Haemophilus haemolyticus HK386]
 gi|341948153|gb|EGT74787.1| ATP synthase epsilon chain [Haemophilus haemolyticus M19501]
 gi|341948627|gb|EGT75248.1| ATP synthase epsilon chain [Haemophilus haemolyticus M19107]
 gi|341953873|gb|EGT80368.1| ATP synthase epsilon chain [Haemophilus haemolyticus M21639]
 gi|386910180|gb|EIJ74839.1| ATP synthase F1, epsilon subunit [Haemophilus haemolyticus HK386]
          Length = 142

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 2/110 (1%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
            + T+ S  +  +  + VKQ+      G  GILP H P L  +KPG++     +G  + I
Sbjct: 4   FNLTIVSAERKIFEGE-VKQIQATGVEGELGILPGHTPLLTAIKPGIVKFTLQDGNEEVI 62

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
           +VS G + V  +  V ++A+ A     LDA   R+   KA+  + S +S+
Sbjct: 63  YVSGGFLEVQPN-IVTVLADVAIRGSELDADRIREAKRKAEENIVSHASD 111


>gi|259910315|ref|YP_002650671.1| F0F1 ATP synthase subunit epsilon [Erwinia pyrifoliae Ep1/96]
 gi|385786623|ref|YP_005817732.1| F0F1 ATP synthase subunit epsilon [Erwinia sp. Ejp617]
 gi|387873336|ref|YP_005804725.1| membrane-bound ATP synthase, F1 sector,epsilon-subunit [Erwinia
           pyrifoliae DSM 12163]
 gi|224965937|emb|CAX57470.1| ATP synthase, F1 complex, epsilon subunit [Erwinia pyrifoliae
           Ep1/96]
 gi|283480438|emb|CAY76354.1| membrane-bound ATP synthase, F1 sector,epsilon-subunit [Erwinia
           pyrifoliae DSM 12163]
 gi|310765895|gb|ADP10845.1| F0F1 ATP synthase subunit epsilon [Erwinia sp. Ejp617]
          Length = 139

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+ + V    G  GI PNH P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 21  VQSIQVSGSEGELGIRPNHAPLLTAIKPGMIRIVKQHGEEEVIYLSGGVLEVQ-PGAVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA++ ++S         AS+E AKA A++ V
Sbjct: 80  LADTAIRGSDLDEARALEAKRKAEAHMNSSHGDVDFAVASAELAKAIAKLRV 131


>gi|188535582|ref|YP_001909379.1| F0F1 ATP synthase subunit epsilon [Erwinia tasmaniensis Et1/99]
 gi|226740255|sp|B2VCA3.1|ATPE_ERWT9 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|188030624|emb|CAO98520.1| ATP synthase, F1 complex, epsilon subunit [Erwinia tasmaniensis
           Et1/99]
          Length = 139

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+ + V    G  GI PNH P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 21  VQSIQVSGSEGELGIRPNHAPLLTAIKPGMIRIVKQHGEEEVIYLSGGVLEVQ-PGAVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA++ ++S         AS+E AKA A++ V
Sbjct: 80  LADTAIRGSDLDEARALEAKRKAEAHMNSSHGDVDFAVASAELAKAIAKLRV 131


>gi|88860638|ref|ZP_01135275.1| ATP synthase subunit epsilon [Pseudoalteromonas tunicata D2]
 gi|88817233|gb|EAR27051.1| ATP synthase subunit epsilon [Pseudoalteromonas tunicata D2]
          Length = 138

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 2/103 (1%)

Query: 27  SGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGT 86
           S  K  ++ + V+ + V    G  GI P H P L  LKPG++ V +  G  + I+V+ GT
Sbjct: 11  SAEKTIFSGR-VETLQVSGSEGELGIYPGHAPLLTALKPGMVRVVKQNGDEEMIYVAGGT 69

Query: 87  ITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASS 129
           + V    +V ++A+ A   + LD   A D   +A+  ++ A +
Sbjct: 70  LEVQ-PGNVTVLADIATRAEDLDEQTALDAKRRAEEHMAKADA 111


>gi|431930556|ref|YP_007243602.1| ATP synthase F1 subunit epsilon [Thioflavicoccus mobilis 8321]
 gi|431828859|gb|AGA89972.1| ATP synthase, F1 epsilon subunit [Thioflavicoccus mobilis 8321]
          Length = 141

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 3/103 (2%)

Query: 44  PSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAH 103
           P   G  GI P H P +  LKPG + V    G  +  +VS G + V  D  + ++A+ A 
Sbjct: 27  PGEMGELGIAPRHTPLITRLKPGDVRVEHDGGQMEHFYVSGGMLEVQPD-VITVLADTAL 85

Query: 104 PVDSLDASAARDVLSKAQSELS--SASSETAKAEAQIAVEVAE 144
               LD +AA +   +A+  L+  SA  E AKA+A++A  VA+
Sbjct: 86  RAHDLDEAAALEAKRRAEDALAGQSAELEYAKAQAELAEAVAQ 128


>gi|386399629|ref|ZP_10084407.1| ATP synthase, F1 epsilon subunit [Bradyrhizobium sp. WSM1253]
 gi|385740255|gb|EIG60451.1| ATP synthase, F1 epsilon subunit [Bradyrhizobium sp. WSM1253]
          Length = 135

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 3/87 (3%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F L S  K+ ++ + V QVD+P   G FG+L  H P +A ++PG++TV  T G  +KI V
Sbjct: 6   FDLVSPEKLAFSGE-VDQVDIPGVEGDFGVLAGHAPVVAAIRPGILTVT-TGGKHEKIIV 63

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLD 109
             G   V+ D  + ++A+ A  +  LD
Sbjct: 64  LGGIAEVS-DKGLTVLADVATSLAELD 89


>gi|429761858|ref|ZP_19294269.1| ATP synthase F1, epsilon subunit [Anaerostipes hadrus DSM 3319]
 gi|429182760|gb|EKY23844.1| ATP synthase F1, epsilon subunit [Anaerostipes hadrus DSM 3319]
          Length = 134

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 66/125 (52%), Gaps = 2/125 (1%)

Query: 19  DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQ 78
           + M   + +  + FYT  +V  V++ +  G  GI   H+P   I+ PGV+ + E +G  +
Sbjct: 4   NTMKLEVITPERSFYTG-DVTFVELNTTEGEVGIYARHIPMTMIIAPGVLRITEEDGTKK 62

Query: 79  KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 138
           K  +  G + V  ++++ I+AE A   + +D   A+    +A+  L + S++   A A++
Sbjct: 63  KAALLKGFVEVT-ETTMSILAEVAEWPEDIDVERAKKAEERARKRLEAKSADIDIARAEL 121

Query: 139 AVEVA 143
           A++ A
Sbjct: 122 ALKRA 126


>gi|221202176|ref|ZP_03575211.1| ATP synthase F1, epsilon subunit [Burkholderia multivorans CGD2M]
 gi|221208763|ref|ZP_03581762.1| ATP synthase F1, epsilon subunit [Burkholderia multivorans CGD2]
 gi|221171395|gb|EEE03843.1| ATP synthase F1, epsilon subunit [Burkholderia multivorans CGD2]
 gi|221177970|gb|EEE10382.1| ATP synthase F1, epsilon subunit [Burkholderia multivorans CGD2M]
          Length = 180

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 60/108 (55%), Gaps = 3/108 (2%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  +G  GILP H P +  ++PG + +    G  + +FV+ G + V    +V ++
Sbjct: 60  KFVALPGETGELGILPGHTPLITRIRPGAVRIEVEGGSDEFVFVAGGILEVQ-PGAVTVL 118

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASS--ETAKAEAQIAVEVAE 144
           A+ A     LDA+ A +   +A+  L +A S  + AKA++++A  +A+
Sbjct: 119 ADTAIRGKDLDAAKAEEARKRAEETLQNAKSDLDLAKAQSELATAMAQ 166


>gi|290993003|ref|XP_002679123.1| ATP synthase epsilon subunit [Naegleria gruberi]
 gi|284092738|gb|EFC46379.1| ATP synthase epsilon subunit [Naegleria gruberi]
          Length = 208

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 2/128 (1%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFS-GAFGILPNHVPTLAILKPGVITVYETEGVSQ 78
           ++  TL + N     +  V  + + +   G +GI PNH   +  + PG+I +   +  + 
Sbjct: 71  KLTLTLCTNNSYIIRSDKVDDISLSTVEFGDYGIFPNHRTQVMRINPGLIKIKYNDEKTV 130

Query: 79  KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 138
           K F + G   V     VQ+   EA+ +D LD +  R  + +AQ EL  +     + +A+I
Sbjct: 131 KWFSAGGFAFVYYHGFVQLNLSEAYKLDELDVNLVRREV-EAQKELLKSRDNAVRGQAEI 189

Query: 139 AVEVAEAL 146
            +E+ E L
Sbjct: 190 GLELLEPL 197


>gi|440289805|ref|YP_007342570.1| ATP synthase, F1 epsilon subunit [Enterobacteriaceae bacterium
           strain FGI 57]
 gi|440049327|gb|AGB80385.1| ATP synthase, F1 epsilon subunit [Enterobacteriaceae bacterium
           strain FGI 57]
          Length = 139

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V   S+  +
Sbjct: 21  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQPGSTT-V 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  + S         AS+E AKA AQ+ V
Sbjct: 80  LADTAIRGQDLDEARALEAKRKAEEHIKSSHGDVDYAQASAELAKAIAQLRV 131


>gi|432536262|ref|ZP_19773199.1| ATP synthase epsilon chain [Escherichia coli KTE234]
 gi|431056831|gb|ELD66323.1| ATP synthase epsilon chain [Escherichia coli KTE234]
          Length = 139

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 21  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQ-PGNVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD +   +   KA+  +SS         AS+E AKA AQ+ V
Sbjct: 80  LADTAIRGQDLDEARVMEAKRKAEEHISSSHGDVDYAQASAELAKAIAQLRV 131


>gi|417976519|ref|ZP_12617312.1| F0F1 ATP synthase subunit epsilon [Escherichia coli XH001]
 gi|344193942|gb|EGV48019.1| F0F1 ATP synthase subunit epsilon [Escherichia coli XH001]
          Length = 139

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 21  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQ-PGNVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  +SS         AS+E  KA AQ+ V
Sbjct: 80  LADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELVKAIAQLRV 131


>gi|167587927|ref|ZP_02380315.1| F0F1 ATP synthase subunit epsilon [Burkholderia ubonensis Bu]
          Length = 141

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 60/108 (55%), Gaps = 3/108 (2%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  +G  GILP H P +  ++PG + +    G  + +FV+ G + V    +V ++
Sbjct: 21  KFVALPGEAGELGILPGHTPLITRIRPGAVRIETESGNDEFVFVAGGILEVQ-PGAVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASSET--AKAEAQIAVEVAE 144
           A+ A     LD++ A +   +A+  L +A S+   AKA++++A  +A+
Sbjct: 80  ADTAIRGKDLDSAKAEEARKRAEETLQNAKSDIDLAKAQSELATAMAQ 127


>gi|237751982|ref|ZP_04582462.1| H+transporting two-sector ATPase [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229376549|gb|EEO26640.1| H+transporting two-sector ATPase [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 130

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 4/83 (4%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           ++D     G K+F  + +VK V +P   G FG+LP HV  +  L+PGVI V + +G  + 
Sbjct: 5   KLDIVTPEG-KIF--SNSVKSVTLPGSEGEFGVLPGHVGIVTTLRPGVIEVEKVDGKKEI 61

Query: 80  IFVSSGTITVNDDSSVQIIAEEA 102
           + ++ G + V D++SV ++AE A
Sbjct: 62  VAINWGHVKV-DETSVDVLAEGA 83


>gi|15966786|ref|NP_387139.1| F0F1 ATP synthase subunit epsilon [Sinorhizobium meliloti 1021]
 gi|15076058|emb|CAC47612.1| Probable ATP synthase epsilon chain [Sinorhizobium meliloti 1021]
          Length = 136

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 2/113 (1%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           A+  +F L S  ++   ++ V +V +P+  G   ++ NH PT+  +KPGV+ V    G +
Sbjct: 4   AESFNFELVSPERLL-VSEKVTEVVIPATEGEMTVMANHAPTMTTIKPGVVAVKTAAGKT 62

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
           ++  V  G   +   S   ++AE A  VD LD +   + +  A++EL  A  E
Sbjct: 63  ERYAVFGGFADIL-PSGCTLLAESAVHVDELDPTVLENRIEAARAELEGAGDE 114


>gi|334337760|ref|YP_004542912.1| ATP synthase subunit epsilon [Isoptericola variabilis 225]
 gi|334108128|gb|AEG45018.1| ATP synthase epsilon chain [Isoptericola variabilis 225]
          Length = 93

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 49/82 (59%), Gaps = 2/82 (2%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           +++  L + ++  ++    ++V  PS  G  GIL  H P LA+L+PG + V + +GV+ +
Sbjct: 3   ELNVDLVAADRKVWSGA-AREVSAPSVEGQIGILAGHTPLLAVLRPGTVKVSDAQGVAVE 61

Query: 80  IFVSSGTITVNDDSSVQIIAEE 101
             V+ G ++V+DD  V I+ +E
Sbjct: 62  AHVTGGFVSVDDD-LVTIVVDE 82


>gi|409203986|ref|ZP_11232186.1| ATP synthase, F1 sector subunit epsilon [Pseudoalteromonas
           flavipulchra JG1]
          Length = 138

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 2/109 (1%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V  + V    G  GI P H P L  LKPG++ + + +   + I+V+ GT+ V    +V +
Sbjct: 21  VTTIQVTGSEGELGIHPGHAPLLTGLKPGMVRLVKADSSEEVIYVAGGTLEVQ-PQTVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           +A+ A   + LD  AA +   +AQ++++S +S     + Q AV++ EAL
Sbjct: 80  LADVAIRAEELDEQAAEEAKREAQAQMASGTSGELDYQ-QAAVQLEEAL 127


>gi|393763488|ref|ZP_10352108.1| F0F1 ATP synthase subunit epsilon [Alishewanella agri BL06]
 gi|392605556|gb|EIW88447.1| F0F1 ATP synthase subunit epsilon [Alishewanella agri BL06]
          Length = 138

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+ V V    G  GILP H P L  LKPG++ + +  G    I+V+ G + V  D ++ +
Sbjct: 21  VESVQVTGSEGELGILPFHAPLLTTLKPGMVRIVKQFGEEHLIYVAGGVLEVQPD-TITV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
           +A+ A   + LD  AA D   +A+  +  AS++
Sbjct: 80  LADVAVRGEDLDEQAALDAQKRAEEAMQHASAD 112


>gi|169142797|ref|YP_001687222.1| ATP synthase CF1 epsilon subunit [Aneura mirabilis]
 gi|153973823|gb|ABS54483.1| ATP synthase CF1 epsilon subunit [Aneura mirabilis]
          Length = 139

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 67/126 (53%), Gaps = 4/126 (3%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           ++  + + N++ +TN+ V+++ + + SG  GILPNH P L  L  G+I +   E  S   
Sbjct: 3   LNLRIMAPNRIVWTNE-VQEIILSTNSGRIGILPNHAPLLTALDIGIIKIRLREQWSTMA 61

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSA-SSETAKAEAQIA 139
            +  G   + +++ + ++  EA     +D+  A++    A++ L+ A SS     EA +A
Sbjct: 62  LM--GGFAMIENNQMIVLVNEAEKAIEIDSREAQETFETARTNLTQAGSSRKQSIEANLA 119

Query: 140 VEVAEA 145
            + A+A
Sbjct: 120 FKRAKA 125


>gi|449096134|ref|YP_007428625.1| ATP synthase subunit epsilon [Bacillus subtilis XF-1]
 gi|449030049|gb|AGE65288.1| ATP synthase subunit epsilon [Bacillus subtilis XF-1]
          Length = 108

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 2/97 (2%)

Query: 47  SGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVD 106
           SG  GILP H+PT+A LK G + + + +G ++ + VS G + V  D  V I+A+ A   +
Sbjct: 5   SGDLGILPGHIPTVAPLKIGAVRL-KKDGQTEMVAVSGGFVEVRPD-HVTILAQAAETAE 62

Query: 107 SLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
            +D   A     +AQ  L++ S +T    A++A++ A
Sbjct: 63  GIDKERAEAARQRAQERLNTQSDDTDIRRAELALQRA 99


>gi|114328719|ref|YP_745876.1| ATP synthase subunit epsilon [Granulibacter bethesdensis CGDNIH1]
 gi|119367733|sp|Q0BQE9.1|ATPE_GRABC RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|114316893|gb|ABI62953.1| ATP synthase epsilon chain [Granulibacter bethesdensis CGDNIH1]
          Length = 135

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 51/88 (57%), Gaps = 1/88 (1%)

Query: 35  NQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSS 94
           +++V  V +P+  G  G+LP H P + +L+ G I +Y+   V+ +++V+ G   +  +  
Sbjct: 17  SRSVDMVVIPAAEGELGVLPGHAPMIVLLQGGTIRLYQNGQVTDRLYVAGGFAEITPERC 76

Query: 95  VQIIAEEAHPVDSLDASAARDVLSKAQS 122
             ++A++A PV  + A+ A   L+ A++
Sbjct: 77  T-VLADQARPVAEISATEAEKRLADAEA 103


>gi|402848376|ref|ZP_10896639.1| ATP synthase epsilon chain [Rhodovulum sp. PH10]
 gi|402501381|gb|EJW13030.1| ATP synthase epsilon chain [Rhodovulum sp. PH10]
          Length = 133

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 2/114 (1%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F L S  K+ ++ + V QVDVP   G FG+   H P +  L+PGV+TVY  E       V
Sbjct: 6   FELVSPEKLMFSGE-VTQVDVPGEEGDFGVFAGHAPFVTTLRPGVLTVYGGEHAPTLAVV 64

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEA 136
             G   +  +  + ++A+E   VD + A      +   + +++ A     K +A
Sbjct: 65  RGGFAEIGPN-GLTVLAQEVVSVDEIQAETIEQAMQDVREDIADAKDFRTKDKA 117


>gi|395785126|ref|ZP_10464859.1| ATP synthase F1, epsilon subunit [Bartonella tamiae Th239]
 gi|423717974|ref|ZP_17692164.1| ATP synthase F1, epsilon subunit [Bartonella tamiae Th307]
 gi|395425313|gb|EJF91482.1| ATP synthase F1, epsilon subunit [Bartonella tamiae Th239]
 gi|395426407|gb|EJF92534.1| ATP synthase F1, epsilon subunit [Bartonella tamiae Th307]
          Length = 135

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           AD   F L S  ++  T Q V +V +P+  G   ++ NH PT+  + PG+I V  T+G  
Sbjct: 2   ADTFLFELVSPEELLLTEQ-VTEVVLPASEGYLTVMVNHAPTMTSIVPGIIKVKPTDG-D 59

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           +K FV  G       +   ++AE A  V+  D +   D + +A+  L +A+ + A+ +A+
Sbjct: 60  EKSFVVFGGFADITPTGCSLLAESAISVEQFDHADLEDRIERARHSLENANGDEARNKAE 119


>gi|224372374|ref|YP_002606746.1| F0F1 ATP synthase subunit epsilon [Nautilia profundicola AmH]
 gi|223589146|gb|ACM92882.1| ATP synthase F1, epsilon subunit [Nautilia profundicola AmH]
          Length = 126

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 1/92 (1%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           VK+   P   G FG+L  H P +  L+PG+IT+ + +G  + I ++SG + V  D  V +
Sbjct: 17  VKEAYFPGIEGEFGVLEGHAPLMTTLQPGIITIKKEDGSEEIIAINSGYVEVTPD-HVNV 75

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSSASS 129
           + + A PV    A    + + KA+  +  A++
Sbjct: 76  LVDGAQPVSGEKAGDIAEAIEKAKKLIRDAAN 107


>gi|268679157|ref|YP_003303588.1| ATP synthase F1 subunit epsilon [Sulfurospirillum deleyianum DSM
           6946]
 gi|268617188|gb|ACZ11553.1| ATP synthase F1, epsilon subunit [Sulfurospirillum deleyianum DSM
           6946]
          Length = 131

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 3/119 (2%)

Query: 32  FYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVND 91
            +TN +VK V +P   G FG+LPNH   +A+L+ G+I +   +G    + ++ G + V D
Sbjct: 15  IFTN-DVKGVTLPGKEGEFGVLPNHASIVALLQAGIIDIELKDGNHDVVAINWGHVKV-D 72

Query: 92  DSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS-SETAKAEAQIAVEVAEALKIF 149
           ++SV I+A+ A  +     S     L  A+  L S S S+ A A A   +E A  LK F
Sbjct: 73  ENSVTILADGAVSIGGTSESEVAKSLEAAKELLKSISDSDVAIAMATAKIESAAKLKKF 131


>gi|160881853|ref|YP_001560821.1| ATP synthase F1 subunit epsilon [Clostridium phytofermentans ISDg]
 gi|160430519|gb|ABX44082.1| ATP synthase F1, epsilon subunit [Clostridium phytofermentans ISDg]
          Length = 139

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 7/122 (5%)

Query: 22  DFTLA--SGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           DF L   S +++F+  +    ++V +  G  GIL +H+P  AIL PG++ +    G  ++
Sbjct: 7   DFKLQIISPDRIFFDGE-TDMIEVKTTEGEMGILKHHIPLTAILTPGILRI--KNGSEER 63

Query: 80  I-FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 138
           I  +  G I +  D  V I+AE     D +D + A++   +A+  L  A     +A A++
Sbjct: 64  IAALHDGFIEILGD-RVTILAESCEWPDEIDLNRAKEAKLRAERRLKGAEGNINEARAEM 122

Query: 139 AV 140
           A+
Sbjct: 123 AL 124


>gi|291280258|ref|YP_003497093.1| F0F1-type ATP synthase subunit epsilon [Deferribacter desulfuricans
           SSM1]
 gi|290754960|dbj|BAI81337.1| F0F1-type ATP synthase, epsilon subunit [Deferribacter
           desulfuricans SSM1]
          Length = 138

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 7/129 (5%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           A+++ F L S  +    N  V +V  P   G FGILP H P L  L+ G + +Y+ +G  
Sbjct: 2   AEKLRFILVSPEREL-LNDEVDEVIAPGVEGDFGILPGHTPFLTALRVGEL-IYKKDGNE 59

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSET----AK 133
           + + +  G + V+DD  V ++AE A     +D   A     +A+  L +A  E      K
Sbjct: 60  EYVALDRGFLEVSDD-VVTVLAESAELGREIDLEEAIRRKLEAEKALEAARKEDEIKFRK 118

Query: 134 AEAQIAVEV 142
            EAQ+  E+
Sbjct: 119 VEAQLQREL 127


>gi|114567887|ref|YP_755041.1| ATP synthase F1 subunit epsilon [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|119367804|sp|Q0AUD4.1|ATPE_SYNWW RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|114338822|gb|ABI69670.1| ATP synthase F1, epsilon subunit [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
          Length = 137

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 64/117 (54%), Gaps = 8/117 (6%)

Query: 30  KVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITV 89
           ++ Y ++ ++ +  P   G  GI+ NH P +A L  GV+    + GV +++ +S G + V
Sbjct: 15  RILYRDE-IQFMVAPGIEGELGIMKNHAPLVAALNIGVLRYQTSTGVDKRMAISGGFMEV 73

Query: 90  NDDSSVQIIAEEAH---PVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
            D+ + +++AE A     +D L A AA++   +A+  L   S E   A A++A++ A
Sbjct: 74  IDNGT-RVLAETAEHGSEIDVLRAKAAKE---RAEKRLEVRSEEINHARAKMALQRA 126


>gi|374572044|ref|ZP_09645140.1| ATP synthase, F1 epsilon subunit [Bradyrhizobium sp. WSM471]
 gi|374420365|gb|EHQ99897.1| ATP synthase, F1 epsilon subunit [Bradyrhizobium sp. WSM471]
          Length = 135

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 3/87 (3%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F L S  K+ ++ + V QVD+P   G FG+L  H P +A ++PG++TV  T G  +KI V
Sbjct: 6   FDLVSPEKLAFSGE-VDQVDIPGVEGDFGVLAGHAPVVAAIRPGILTVT-TGGKHEKIIV 63

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLD 109
             G   V+ D  + ++A+ A  +  LD
Sbjct: 64  LGGIAEVS-DKGLTVLADVATSLAELD 89


>gi|258517233|ref|YP_003193455.1| F0F1 ATP synthase subunit epsilon [Desulfotomaculum acetoxidans DSM
           771]
 gi|257780938|gb|ACV64832.1| ATP synthase F1, epsilon subunit [Desulfotomaculum acetoxidans DSM
           771]
          Length = 133

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 64/109 (58%), Gaps = 2/109 (1%)

Query: 35  NQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSS 94
           ++++  V VP  +G  G LP H P ++ LK G++ V + +G   KI +SSG + V  +S 
Sbjct: 19  SEDIGFVVVPGVAGELGFLPEHTPLVSALKTGIVRV-QQDGKEFKIAISSGFVEVK-NSR 76

Query: 95  VQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
           V I+A+ A   D +D S A    ++A+  LSS+SS+   A A+ A++ A
Sbjct: 77  VVILADAAERADQIDKSRAEAAKARAEQRLSSSSSDIDVARAEAALKRA 125


>gi|83746947|ref|ZP_00943993.1| ATP synthase epsilon chain [Ralstonia solanacearum UW551]
 gi|207744811|ref|YP_002261203.1| atp synthase epsilon chain 1 (atp synthase f1 sectorepsilon subunit
           1) protein [Ralstonia solanacearum IPO1609]
 gi|300689833|ref|YP_003750828.1| ATP synthase F1 sector subunit epsilon [Ralstonia solanacearum
           PSI07]
 gi|300702514|ref|YP_003744114.1| ATP synthase, f1 sector subunit epsilon [Ralstonia solanacearum
           CFBP2957]
 gi|386331799|ref|YP_006027968.1| atp synthase epsilon chain 1 (atp synthase f1 sectorepsilon subunit
           1) protein [Ralstonia solanacearum Po82]
 gi|421889970|ref|ZP_16320955.1| ATP synthase, F1 sector, epsilon subunit [Ralstonia solanacearum
           K60-1]
 gi|421896143|ref|ZP_16326542.1| atp synthase epsilon chain 1 (atp synthase f1 sectorepsilon subunit
           1) protein [Ralstonia solanacearum MolK2]
 gi|83726367|gb|EAP73499.1| ATP synthase epsilon chain [Ralstonia solanacearum UW551]
 gi|206587308|emb|CAQ17892.1| atp synthase epsilon chain 1 (atp synthase f1 sectorepsilon subunit
           1) protein [Ralstonia solanacearum MolK2]
 gi|206596221|emb|CAQ63148.1| atp synthase epsilon chain 1 (atp synthase f1 sectorepsilon subunit
           1) protein [Ralstonia solanacearum IPO1609]
 gi|299070175|emb|CBJ41466.1| ATP synthase, F1 sector, epsilon subunit [Ralstonia solanacearum
           CFBP2957]
 gi|299076893|emb|CBJ49506.1| ATP synthase, F1 sector, epsilon subunit [Ralstonia solanacearum
           PSI07]
 gi|334194247|gb|AEG67432.1| atp synthase epsilon chain 1 (atp synthase f1 sectorepsilon subunit
           1) protein [Ralstonia solanacearum Po82]
 gi|344168459|emb|CCA80744.1| ATP synthase, F1 sector, epsilon subunit [blood disease bacterium
           R229]
 gi|344173029|emb|CCA85698.1| ATP synthase, F1 sector, epsilon subunit [Ralstonia syzygii R24]
 gi|378964679|emb|CCF97703.1| ATP synthase, F1 sector, epsilon subunit [Ralstonia solanacearum
           K60-1]
          Length = 138

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 1/101 (0%)

Query: 37  NVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQ 96
           N K V +P  +G  GILP H P +  +KPG + + + +G  + +FV+ G + V     V 
Sbjct: 19  NAKFVALPGEAGELGILPGHTPLITRIKPGAVRIEKEDGGEEFVFVAGGILEVQ-PKKVT 77

Query: 97  IIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           ++A+ A     LD + A +    A+  L + SS+   A AQ
Sbjct: 78  VLADTAIRGHDLDEAKANEAKRAAEEALQNQSSDLDLARAQ 118


>gi|260437516|ref|ZP_05791332.1| ATP synthase F1, epsilon subunit [Butyrivibrio crossotus DSM 2876]
 gi|292810149|gb|EFF69354.1| ATP synthase F1, epsilon subunit [Butyrivibrio crossotus DSM 2876]
          Length = 133

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 3/121 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           M   +   ++ FYT + V   +  +  G  G+ P H+P   IL PGV+ ++E  G  +K 
Sbjct: 6   MKLEIMCPDRNFYTGE-VTMAEFNTTEGYIGVYPEHIPLAVILSPGVLVIHEPGG-EKKA 63

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
            + SG   +  D  + I AE A   D +D + AR+   +A+  +S   S      A+IA+
Sbjct: 64  ALHSGFAKIMKD-KISIFAEIAEWPDEIDENRAREAKIRAERRISGDKSGIDLQRAEIAL 122

Query: 141 E 141
           +
Sbjct: 123 K 123


>gi|313183925|ref|YP_004021779.1| ATP synthase CF1 epsilon subunit [Equisetum arvense]
 gi|281371645|gb|ADA63578.1| ATP synthase CF1 epsilon subunit (chloroplast) [Equisetum arvense]
 gi|359751551|gb|AEV58345.1| ATP synthase CF1 epsilon subunit [Equisetum arvense]
          Length = 131

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 3/126 (2%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           +++  + + N++ + N  V+++ + + SG  GILPNH P L  L  GV  +      S  
Sbjct: 2   KLNLRVMAPNRIVW-NSEVEEIILSTNSGKIGILPNHAPLLTALDIGVTQIRRNGQWSNM 60

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 139
             +  G   + D + V I+  EA     +D   A+    +A+ +L  A S   + EA +A
Sbjct: 61  ALM--GGFGMIDRNQVIILVNEAEKGSDIDTEEAKRKFLRAKYDLEQAESRKNRIEANLA 118

Query: 140 VEVAEA 145
           ++ A+A
Sbjct: 119 LKRAKA 124


>gi|241664765|ref|YP_002983125.1| F0F1 ATP synthase subunit epsilon [Ralstonia pickettii 12D]
 gi|309780426|ref|ZP_07675176.1| ATP synthase F1, epsilon subunit [Ralstonia sp. 5_7_47FAA]
 gi|404395029|ref|ZP_10986832.1| ATP synthase epsilon chain 1 [Ralstonia sp. 5_2_56FAA]
 gi|240866792|gb|ACS64453.1| ATP synthase F1, epsilon subunit [Ralstonia pickettii 12D]
 gi|308920819|gb|EFP66466.1| ATP synthase F1, epsilon subunit [Ralstonia sp. 5_7_47FAA]
 gi|348615059|gb|EGY64590.1| ATP synthase epsilon chain 1 [Ralstonia sp. 5_2_56FAA]
          Length = 138

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 1/101 (0%)

Query: 37  NVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQ 96
           N K V +P  +G  GILP H P +  +KPG + + + +G  + +FV+ G + V     V 
Sbjct: 19  NAKFVALPGEAGELGILPGHTPLITRIKPGAVRIEKEDGGEEFVFVAGGILEVQ-PKKVT 77

Query: 97  IIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           ++A+ A     LD + A +    A+  L + SS+   A AQ
Sbjct: 78  VLADTAIRGHDLDEAKANEAKRAAEEALQNQSSDLDLARAQ 118


>gi|336122819|ref|YP_004564867.1| ATP synthase epsilon chain [Vibrio anguillarum 775]
 gi|335340542|gb|AEH31825.1| ATP synthase epsilon chain [Vibrio anguillarum 775]
          Length = 140

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 11/123 (8%)

Query: 27  SGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGT 86
           S  K  ++ Q V+   V    G  GI   H P L  +KPG++ + +  G  + I+VS G 
Sbjct: 12  SAEKKIFSGQ-VETFQVTGSEGELGIFHGHTPLLTAIKPGMVRIVKLHGHEEIIYVSGGI 70

Query: 87  ITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQ 137
           + V   ++  ++A+ A   + LDA+ A +   KA+  +S+         A+SE AKA AQ
Sbjct: 71  VEVQPGTAT-VLADTAIRGEELDAAKAEEAKRKAEENISNQHGDMNFAQAASELAKAMAQ 129

Query: 138 IAV 140
           + V
Sbjct: 130 LRV 132


>gi|342904727|ref|ZP_08726525.1| ATP synthase epsilon chain [Haemophilus haemolyticus M21621]
 gi|341952604|gb|EGT79127.1| ATP synthase epsilon chain [Haemophilus haemolyticus M21621]
          Length = 142

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 2/110 (1%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
            + T+ S  +  +  + VKQ+      G  GILP H P L  +KPG++     +G    I
Sbjct: 4   FNLTIVSAERKIFEGE-VKQIQATGVEGELGILPGHTPLLTAIKPGIVKFILQDGNEDVI 62

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
           +VS G + V  +  V ++A+ A     LDA   R+   KA+  + S +S+
Sbjct: 63  YVSGGFLEVQPN-IVTVLADVAIRGSELDADRIREAKRKAEENIVSHASD 111


>gi|291521331|emb|CBK79624.1| ATP synthase, F1 epsilon subunit (delta in mitochondria)
           [Coprococcus catus GD/7]
          Length = 136

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 54/100 (54%), Gaps = 1/100 (1%)

Query: 32  FYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVND 91
              +++VK V++ +  G  G+LP H+P   ++ PGV  + + +G  + I +  G + +  
Sbjct: 15  LMCDESVKMVEMRTAEGEIGVLPGHIPVTVMMAPGVTHITKADGSIRHIAIHDGFVEIQP 74

Query: 92  DSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSET 131
           D  V I+AE A   + +D   A+  LS+A+  +++   +T
Sbjct: 75  D-KVSIMAEIAEWPEEVDLDRAKAALSRARERITNPGPDT 113


>gi|266624714|ref|ZP_06117649.1| ATP synthase F1, epsilon subunit [Clostridium hathewayi DSM 13479]
 gi|288863413|gb|EFC95711.1| ATP synthase F1, epsilon subunit [Clostridium hathewayi DSM 13479]
          Length = 132

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 3/126 (2%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           AD     + +  + FY  +    V++ +  G  G+  NH+P  AI+ PGV+ ++E  GV 
Sbjct: 2   ADLFKLHVITPERRFYDGE-ASMVELSTTEGDIGVYRNHIPLTAIVAPGVLKIHEEGGVK 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           +   + SG I +  +  + I+AE A   D +D + A +   +A+  L   S E     A+
Sbjct: 61  EAALM-SGFIEILPE-RITIMAEVAEWPDEIDGNRAEEARIRAERRLKEESGEIDTMRAE 118

Query: 138 IAVEVA 143
           +A+  A
Sbjct: 119 LALRRA 124


>gi|333924778|ref|YP_004498358.1| ATP synthase subunit epsilon [Desulfotomaculum carboxydivorans
           CO-1-SRB]
 gi|333750339|gb|AEF95446.1| ATP synthase epsilon chain [Desulfotomaculum carboxydivorans
           CO-1-SRB]
          Length = 132

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 2/100 (2%)

Query: 44  PSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAH 103
           P   G  GILP H P +  LK GV+ V + +G   K+ VS G + V  +S V ++A+ A 
Sbjct: 27  PGADGELGILPEHAPLVTALKIGVMRV-QQDGKFFKVAVSGGFMEVK-NSRVVVLADTAE 84

Query: 104 PVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
             D +D   AR    +A+  L+S S +   A A+IA+  A
Sbjct: 85  RADEIDVERARAAKQRAEQRLASKSPDIDVARAEIALHKA 124


>gi|206577989|ref|YP_002241288.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae 342]
 gi|288937927|ref|YP_003441986.1| ATP synthase F1 subunit epsilon [Klebsiella variicola At-22]
 gi|290511667|ref|ZP_06551035.1| ATP synthase F1, epsilon subunit [Klebsiella sp. 1_1_55]
 gi|226740265|sp|B5XZM5.1|ATPE_KLEP3 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|206567047|gb|ACI08823.1| ATP synthase F1, epsilon subunit [Klebsiella pneumoniae 342]
 gi|288892636|gb|ADC60954.1| ATP synthase F1, epsilon subunit [Klebsiella variicola At-22]
 gi|289775457|gb|EFD83457.1| ATP synthase F1, epsilon subunit [Klebsiella sp. 1_1_55]
          Length = 139

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    SV +
Sbjct: 21  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQ-PGSVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  + S         AS+E AKA A++ V
Sbjct: 80  LADTAIRGQDLDEARALEAKRKAEEHIKSSHGDVDYAQASAELAKAIAKLRV 131


>gi|398793964|ref|ZP_10554190.1| ATP synthase, F1 epsilon subunit [Pantoea sp. YR343]
 gi|398209556|gb|EJM96227.1| ATP synthase, F1 epsilon subunit [Pantoea sp. YR343]
          Length = 139

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V   S+  +
Sbjct: 21  VERIQVSGSEGELGIRPGHAPLLTAIKPGMIHIVKQHGEEEFIYLSGGVLEVQPGSTT-V 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A   + LD + A +   KA+  ++S         AS+E AKA A++ V
Sbjct: 80  LADTAIRGEDLDEARALEAKRKAEEHMNSSHGDVDYAQASAELAKAIAKLRV 131


>gi|291615581|ref|YP_003518323.1| AtpC [Pantoea ananatis LMG 20103]
 gi|378765034|ref|YP_005193493.1| ATP synthase F1 subunit epsilon [Pantoea ananatis LMG 5342]
 gi|386017769|ref|YP_005936069.1| ATP synthase subunit epsilon [Pantoea ananatis AJ13355]
 gi|386077298|ref|YP_005990823.1| ATP synthase subunit epsilon [Pantoea ananatis PA13]
 gi|291150611|gb|ADD75195.1| AtpC [Pantoea ananatis LMG 20103]
 gi|327395851|dbj|BAK13273.1| ATP synthase epsilon chain AtpC [Pantoea ananatis AJ13355]
 gi|354986479|gb|AER30603.1| ATP synthase epsilon chain AtpC [Pantoea ananatis PA13]
 gi|365184506|emb|CCF07456.1| ATP synthase F1 subunit epsilon [Pantoea ananatis LMG 5342]
          Length = 139

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V   S+  +
Sbjct: 21  VQKIQVSGSEGELGIFPGHAPLLTAIKPGMIRIVKQHGEEEFIYLSGGVLEVQPGSTT-V 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  ++S         AS+E AKA A++ V
Sbjct: 80  LADTAIRGTDLDEARALEAKRKAEEHMNSSHGDVDYAQASAELAKAIAKLRV 131


>gi|16762462|ref|NP_458079.1| ATP synthase F0F1 subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|16767148|ref|NP_462763.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|29143950|ref|NP_807292.1| ATP synthase F0F1 subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56415732|ref|YP_152807.1| ATP synthase F0F1 subunit epsilon [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|62182346|ref|YP_218763.1| ATP synthase F0F1 subunit epsilon [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|152972640|ref|YP_001337786.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|194444185|ref|YP_002043110.1| ATP synthase F0F1 subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|197249617|ref|YP_002148799.1| ATP synthase F0F1 subunit epsilon [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197364660|ref|YP_002144297.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|205354553|ref|YP_002228354.1| ATP synthase F0F1 subunit epsilon [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205357463|ref|ZP_02347905.2| ATP synthase F1, epsilon subunit [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|207859087|ref|YP_002245738.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|213052671|ref|ZP_03345549.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213427471|ref|ZP_03360221.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213613218|ref|ZP_03371044.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|224585659|ref|YP_002639458.1| ATP synthase F0F1 subunit epsilon [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238897238|ref|YP_002921986.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|262040364|ref|ZP_06013610.1| ATP synthase F1 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|283787580|ref|YP_003367445.1| ATP synthase subunit epsilon [Citrobacter rodentium ICC168]
 gi|330005182|ref|ZP_08305144.1| ATP synthase F1, epsilon subunit [Klebsiella sp. MS 92-3]
 gi|365141202|ref|ZP_09347057.1| ATP synthase epsilon chain [Klebsiella sp. 4_1_44FAA]
 gi|375003731|ref|ZP_09728070.1| ATP synthase F1, epsilon subunit [Salmonella enterica subsp.
           enterica serovar Infantis str. SARB27]
 gi|375116692|ref|ZP_09761862.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SCSA50]
 gi|375121329|ref|ZP_09766496.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Dublin str. SD3246]
 gi|375125438|ref|ZP_09770602.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Gallinarum str. SG9]
 gi|378447225|ref|YP_005234857.1| ATP synthase subunit epsilon [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|378452772|ref|YP_005240132.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|378701747|ref|YP_005183705.1| ATP synthase subunit epsilon [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|378961813|ref|YP_005219299.1| hypothetical protein STBHUCCB_38450 [Salmonella enterica subsp.
           enterica serovar Typhi str. P-stx-12]
 gi|378991166|ref|YP_005254330.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
 gi|379703127|ref|YP_005244855.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhimurium str. ST4/74]
 gi|383498491|ref|YP_005399180.1| ATP synthase subunit epsilon [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 798]
 gi|386037271|ref|YP_005957184.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae KCTC 2242]
 gi|409247555|ref|YP_006888252.1| membrane-bound ATP synthase, F1 sector, epsilon-subunit [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           2007-60-3289-1]
 gi|416421105|ref|ZP_11689290.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|416540570|ref|ZP_11750426.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|416649734|ref|ZP_11810061.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|416658346|ref|ZP_11814243.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|416664781|ref|ZP_11816325.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|416682247|ref|ZP_11823966.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|416730500|ref|ZP_11848655.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|416739904|ref|ZP_11854071.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|416769832|ref|ZP_11871270.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|417329839|ref|ZP_12114586.1| ATP synthase epsilon chain [Salmonella enterica subsp. enterica
           serovar Adelaide str. A4-669]
 gi|417337537|ref|ZP_12119652.1| ATP synthase epsilon chain [Salmonella enterica subsp. enterica
           serovar Alachua str. R6-377]
 gi|417344886|ref|ZP_12125132.1| ATP synthase epsilon chain [Salmonella enterica subsp. enterica
           serovar Baildon str. R6-199]
 gi|417353561|ref|ZP_12130296.1| ATP synthase epsilon chain [Salmonella enterica subsp. enterica
           serovar Gaminara str. A4-567]
 gi|417361657|ref|ZP_12135495.1| ATP synthase epsilon chain [Salmonella enterica subsp. enterica
           serovar Give str. S5-487]
 gi|417369272|ref|ZP_12140516.1| ATP synthase epsilon chain [Salmonella enterica subsp. enterica
           serovar Hvittingfoss str. A4-620]
 gi|417376872|ref|ZP_12145937.1| ATP synthase epsilon chain [Salmonella enterica subsp. enterica
           serovar Inverness str. R8-3668]
 gi|417386881|ref|ZP_12151460.1| ATP synthase epsilon chain [Salmonella enterica subsp. enterica
           serovar Johannesburg str. S5-703]
 gi|417394512|ref|ZP_12156668.1| ATP synthase epsilon chain [Salmonella enterica subsp. enterica
           serovar Minnesota str. A4-603]
 gi|417436276|ref|ZP_12161626.1| ATP synthase epsilon chain [Salmonella enterica subsp. enterica
           serovar Mississippi str. A4-633]
 gi|417470936|ref|ZP_12167015.1| ATP synthase epsilon chain [Salmonella enterica subsp. enterica
           serovar Montevideo str. S5-403]
 gi|417489538|ref|ZP_12172852.1| ATP synthase epsilon chain [Salmonella enterica subsp. enterica
           serovar Rubislaw str. A4-653]
 gi|417514587|ref|ZP_12178352.1| ATP synthase epsilon chain [Salmonella enterica subsp. enterica
           serovar Senftenberg str. A4-543]
 gi|417521580|ref|ZP_12183248.1| ATP synthase epsilon chain [Salmonella enterica subsp. enterica
           serovar Uganda str. R8-3404]
 gi|417535008|ref|ZP_12188616.1| ATP synthase epsilon chain [Salmonella enterica subsp. enterica
           serovar Urbana str. R8-2977]
 gi|417542750|ref|ZP_12194107.1| ATP synthase epsilon chain [Salmonella enterica subsp. enterica
           serovar Wandsworth str. A4-580]
 gi|418489278|ref|ZP_13056403.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. CT_02035278]
 gi|418495990|ref|ZP_13062427.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. CT_02035318]
 gi|418501511|ref|ZP_13067895.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. CT_02035320]
 gi|418503477|ref|ZP_13069840.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. CT_02035321]
 gi|418506269|ref|ZP_13072603.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. CT_02035327]
 gi|418526560|ref|ZP_13092535.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008286]
 gi|418777105|ref|ZP_13333040.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 33953]
 gi|418782739|ref|ZP_13338598.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 21559]
 gi|418787221|ref|ZP_13343025.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 19447]
 gi|418814378|ref|ZP_13369894.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 21538]
 gi|418819352|ref|ZP_13374804.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 22425]
 gi|418854143|ref|ZP_13408823.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 19593]
 gi|419729960|ref|ZP_14256914.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Heidelberg str. 41579]
 gi|419734381|ref|ZP_14261273.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Heidelberg str. 41563]
 gi|419737923|ref|ZP_14264692.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Heidelberg str. 41573]
 gi|419744025|ref|ZP_14270685.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Heidelberg str. 41566]
 gi|419749685|ref|ZP_14276163.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Heidelberg str. 41565]
 gi|419974174|ref|ZP_14489595.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH1]
 gi|419979425|ref|ZP_14494716.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH2]
 gi|419986279|ref|ZP_14501413.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH4]
 gi|419991957|ref|ZP_14506918.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH5]
 gi|419996946|ref|ZP_14511745.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH6]
 gi|420004168|ref|ZP_14518808.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH7]
 gi|420009867|ref|ZP_14524346.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH8]
 gi|420015099|ref|ZP_14529402.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH9]
 gi|420021389|ref|ZP_14535569.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH10]
 gi|420026958|ref|ZP_14540956.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH11]
 gi|420032720|ref|ZP_14546532.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH12]
 gi|420039458|ref|ZP_14553092.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH14]
 gi|420044463|ref|ZP_14557943.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH16]
 gi|420050389|ref|ZP_14563689.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH17]
 gi|420055777|ref|ZP_14568941.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH18]
 gi|420062027|ref|ZP_14575007.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH19]
 gi|420066365|ref|ZP_14579166.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH20]
 gi|420071377|ref|ZP_14584023.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH21]
 gi|420076715|ref|ZP_14589185.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH22]
 gi|420084121|ref|ZP_14596388.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH23]
 gi|421356484|ref|ZP_15806806.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 622731-39]
 gi|421361000|ref|ZP_15811270.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 639016-6]
 gi|421366002|ref|ZP_15816208.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 640631]
 gi|421373138|ref|ZP_15823282.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 77-0424]
 gi|421377354|ref|ZP_15827451.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 607307-6]
 gi|421379315|ref|ZP_15829385.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 485549-17]
 gi|421386639|ref|ZP_15836649.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 596866-22]
 gi|421390882|ref|ZP_15840856.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 596866-70]
 gi|421392706|ref|ZP_15842657.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 629164-26]
 gi|421397328|ref|ZP_15847245.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 629164-37]
 gi|421404322|ref|ZP_15854165.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 639672-46]
 gi|421406317|ref|ZP_15856132.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 639672-50]
 gi|421410655|ref|ZP_15860432.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 77-1427]
 gi|421417824|ref|ZP_15867533.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 77-2659]
 gi|421422852|ref|ZP_15872518.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 78-1757]
 gi|421426936|ref|ZP_15876563.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 22510-1]
 gi|421428898|ref|ZP_15878500.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 8b-1]
 gi|421435987|ref|ZP_15885522.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648905 5-18]
 gi|421437957|ref|ZP_15887462.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648901 6-18]
 gi|421445082|ref|ZP_15894511.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 50-3079]
 gi|421450032|ref|ZP_15899411.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 58-6482]
 gi|421569820|ref|ZP_16015520.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Heidelberg str. CFSAN00322]
 gi|421576301|ref|ZP_16021903.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Heidelberg str. CFSAN00325]
 gi|421581720|ref|ZP_16027262.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Heidelberg str. CFSAN00326]
 gi|421582351|ref|ZP_16027889.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Heidelberg str. CFSAN00328]
 gi|421886796|ref|ZP_16317966.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Senftenberg str. SS209]
 gi|422028111|ref|ZP_16374430.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm1]
 gi|422033158|ref|ZP_16379246.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm2]
 gi|424833100|ref|ZP_18257828.1| ATP synthase F1, epsilon subunit [Klebsiella pneumoniae subsp.
           pneumoniae Ecl8]
 gi|424931062|ref|ZP_18349434.1| ATP synthase epsilon chain [Klebsiella pneumoniae subsp. pneumoniae
           KpQ3]
 gi|425074153|ref|ZP_18477256.1| ATP synthase epsilon chain [Klebsiella pneumoniae subsp. pneumoniae
           WGLW1]
 gi|425083901|ref|ZP_18486998.1| ATP synthase epsilon chain [Klebsiella pneumoniae subsp. pneumoniae
           WGLW2]
 gi|425084789|ref|ZP_18487882.1| ATP synthase epsilon chain [Klebsiella pneumoniae subsp. pneumoniae
           WGLW3]
 gi|425094016|ref|ZP_18497100.1| ATP synthase epsilon chain [Klebsiella pneumoniae subsp. pneumoniae
           WGLW5]
 gi|427556221|ref|ZP_18929752.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm8]
 gi|427573610|ref|ZP_18934343.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm9]
 gi|427595108|ref|ZP_18939258.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm3]
 gi|427619845|ref|ZP_18944173.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm4]
 gi|427643201|ref|ZP_18949028.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm6]
 gi|427658130|ref|ZP_18953752.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm10]
 gi|427679883|ref|ZP_18963546.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm12]
 gi|427801400|ref|ZP_18968978.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm5]
 gi|428931921|ref|ZP_19005509.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae JHCK1]
 gi|428938982|ref|ZP_19012100.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae VA360]
 gi|436592308|ref|ZP_20512161.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 22704]
 gi|436783452|ref|ZP_20521241.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. SE30663]
 gi|436800005|ref|ZP_20524209.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CHS44]
 gi|436809643|ref|ZP_20528990.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1882]
 gi|436817709|ref|ZP_20534598.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1884]
 gi|436831603|ref|ZP_20536264.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1594]
 gi|436847745|ref|ZP_20539807.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1566]
 gi|436855359|ref|ZP_20544614.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1580]
 gi|436862383|ref|ZP_20549114.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1543]
 gi|436868314|ref|ZP_20553160.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1441]
 gi|436880648|ref|ZP_20560336.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1810]
 gi|436886057|ref|ZP_20562621.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1558]
 gi|436893089|ref|ZP_20567136.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1018]
 gi|436905838|ref|ZP_20574814.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1010]
 gi|436913631|ref|ZP_20578922.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1729]
 gi|436916034|ref|ZP_20580180.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_0895]
 gi|436927626|ref|ZP_20587377.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_0899]
 gi|436936840|ref|ZP_20592193.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1457]
 gi|436943819|ref|ZP_20596642.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1747]
 gi|436952347|ref|ZP_20601128.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_0968]
 gi|436962329|ref|ZP_20605507.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1444]
 gi|436971773|ref|ZP_20609999.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1445]
 gi|436977013|ref|ZP_20612186.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1559]
 gi|436999162|ref|ZP_20620072.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1565]
 gi|437002051|ref|ZP_20621204.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1808]
 gi|437013280|ref|ZP_20625148.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1811]
 gi|437028813|ref|ZP_20630811.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_0956]
 gi|437040229|ref|ZP_20634616.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1455]
 gi|437047441|ref|ZP_20638886.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1575]
 gi|437061096|ref|ZP_20646812.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1725]
 gi|437067221|ref|ZP_20650239.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1745]
 gi|437076661|ref|ZP_20655004.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1791]
 gi|437079912|ref|ZP_20656787.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1795]
 gi|437087291|ref|ZP_20661101.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 576709]
 gi|437100916|ref|ZP_20666171.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 635290-58]
 gi|437121723|ref|ZP_20671900.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 607308-16]
 gi|437127371|ref|ZP_20674718.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 607308-19]
 gi|437135004|ref|ZP_20679149.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 607307-2]
 gi|437147281|ref|ZP_20686810.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 607308-9]
 gi|437153990|ref|ZP_20690850.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 629163]
 gi|437163529|ref|ZP_20696711.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. SE15-1]
 gi|437164546|ref|ZP_20697184.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CVM_N202]
 gi|437178271|ref|ZP_20704580.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CVM_56-3991]
 gi|437181615|ref|ZP_20706640.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CVM_76-3618]
 gi|437200110|ref|ZP_20711614.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 13183-1]
 gi|437261457|ref|ZP_20718505.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CVM_81-2490]
 gi|437279478|ref|ZP_20727726.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. SL913]
 gi|437283707|ref|ZP_20729240.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CVM_69-4941]
 gi|437304730|ref|ZP_20734071.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 638970-15]
 gi|437329324|ref|ZP_20741281.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 17927]
 gi|437336226|ref|ZP_20742947.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CHS4]
 gi|437362677|ref|ZP_20748420.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 22558]
 gi|437418613|ref|ZP_20754280.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 543463 22-17]
 gi|437446525|ref|ZP_20758787.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 543463 40-18]
 gi|437458939|ref|ZP_20760908.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 561362 1-1]
 gi|437471493|ref|ZP_20765260.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 642044 4-1]
 gi|437493524|ref|ZP_20772175.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 642046 4-7]
 gi|437503067|ref|ZP_20774778.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648898 4-5]
 gi|437522093|ref|ZP_20778977.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648899 3-17]
 gi|437561176|ref|ZP_20786344.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648900 1-16]
 gi|437569770|ref|ZP_20788058.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648901 1-17]
 gi|437592776|ref|ZP_20795237.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648901 39-2]
 gi|437598805|ref|ZP_20796779.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648902 6-8]
 gi|437624222|ref|ZP_20805205.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648903 1-6]
 gi|437637831|ref|ZP_20807420.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648904 3-6]
 gi|437655398|ref|ZP_20810453.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 653049 13-19]
 gi|437680097|ref|ZP_20818306.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 642044 8-1]
 gi|437699218|ref|ZP_20823409.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 561362 9-7]
 gi|437714677|ref|ZP_20827715.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 543463 42-20]
 gi|437734103|ref|ZP_20832158.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648901 16-16]
 gi|437768141|ref|ZP_20835280.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 76-2651]
 gi|437801878|ref|ZP_20838243.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 33944]
 gi|437835339|ref|ZP_20845259.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. SARB17]
 gi|437927981|ref|ZP_20851007.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 6.0562-1]
 gi|437980390|ref|ZP_20853265.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 50-5646]
 gi|438090353|ref|ZP_20860559.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 81-2625]
 gi|438097456|ref|ZP_20862378.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 62-1976]
 gi|438107585|ref|ZP_20866797.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 53-407]
 gi|438136169|ref|ZP_20874356.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Pullorum str. ATCC 9120]
 gi|440762619|ref|ZP_20941673.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Agona str. SH11G1113]
 gi|440770684|ref|ZP_20949632.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Agona str. SH08SF124]
 gi|440775215|ref|ZP_20954099.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Agona str. SH10GFN094]
 gi|445131311|ref|ZP_21381710.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9184]
 gi|445142711|ref|ZP_21386202.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Dublin str. SL1438]
 gi|445153253|ref|ZP_21391325.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Dublin str. HWS51]
 gi|445167425|ref|ZP_21394412.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. SE8a]
 gi|445181315|ref|ZP_21398294.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 20037]
 gi|445223217|ref|ZP_21403423.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. SE10]
 gi|445246928|ref|ZP_21408366.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 436]
 gi|445329774|ref|ZP_21413631.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 18569]
 gi|445346068|ref|ZP_21418592.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 13-1]
 gi|445359820|ref|ZP_21423208.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. PT23]
 gi|449049112|ref|ZP_21731361.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae hvKP1]
 gi|452122345|ref|YP_007472593.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Javiana str. CFSAN001992]
 gi|60391813|sp|P0A1B7.2|ATPE_SALTY RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|60391814|sp|P0A1B8.2|ATPE_SALTI RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|75505464|sp|Q57HY0.1|ATPE_SALCH RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|81678060|sp|Q5PKX3.1|ATPE_SALPA RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|166222467|sp|A6TG35.1|ATPE_KLEP7 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|226740281|sp|B5EYZ5.1|ATPE_SALA4 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|226740282|sp|B5QUS3.1|ATPE_SALEP RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|226740283|sp|B5RFW4.1|ATPE_SALG2 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|226740284|sp|B4SYD0.1|ATPE_SALNS RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|226740285|sp|B5BIN5.1|ATPE_SALPK RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|254809381|sp|C0Q2N1.1|ATPE_SALPC RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|25290501|pir||AG0954 ATP synthase epsilon chain [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16422438|gb|AAL22722.1| membrane-bound ATP synthase, F1 sector, epsilon-subunit [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|16504767|emb|CAD03131.1| ATP synthase epsilon subunit [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29139586|gb|AAO71152.1| ATP synthase epsilon subunit [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56129989|gb|AAV79495.1| ATP synthase epsilon subunit [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|62129979|gb|AAX67682.1| membrane-bound ATP synthase, F1 sector, epsilon-subunit [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|150957489|gb|ABR79519.1| ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|194402848|gb|ACF63070.1| ATP synthase F1, epsilon subunit [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|197096137|emb|CAR61733.1| ATP synthase epsilon subunit [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197213320|gb|ACH50717.1| ATP synthase F1, epsilon subunit [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|205274334|emb|CAR39358.1| ATP synthase epsilon subunit [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205321579|gb|EDZ09418.1| ATP synthase F1, epsilon subunit [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|206710890|emb|CAR35254.1| ATP synthase epsilon subunit [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224470187|gb|ACN48017.1| ATP synthase subunit epsilon [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|238549568|dbj|BAH65919.1| ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|259042305|gb|EEW43330.1| ATP synthase F1 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|261249004|emb|CBG26862.1| ATP synthase epsilon subunit [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267996151|gb|ACY91036.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|282951034|emb|CBG90712.1| ATP synthase epsilon subunit [Citrobacter rodentium ICC168]
 gi|301160396|emb|CBW19922.1| ATP synthase epsilon subunit [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|320088289|emb|CBY98050.1| membrane-bound ATP synthase, F1 sector, epsilon-subunit [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           2007-60-3289-1]
 gi|322617223|gb|EFY14128.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322661556|gb|EFY57779.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322716838|gb|EFZ08409.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SCSA50]
 gi|323132226|gb|ADX19656.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhimurium str. ST4/74]
 gi|323211745|gb|EFZ96578.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323218607|gb|EGA03314.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323220008|gb|EGA04478.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323248605|gb|EGA32535.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323252096|gb|EGA35956.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323270619|gb|EGA54064.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|326625596|gb|EGE31941.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Dublin str. SD3246]
 gi|326629688|gb|EGE36031.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Gallinarum str. SG9]
 gi|328536388|gb|EGF62747.1| ATP synthase F1, epsilon subunit [Klebsiella sp. MS 92-3]
 gi|332990713|gb|AEF09696.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
 gi|339764399|gb|AEK00620.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae KCTC 2242]
 gi|353074646|gb|EHB40407.1| ATP synthase F1, epsilon subunit [Salmonella enterica subsp.
           enterica serovar Infantis str. SARB27]
 gi|353563803|gb|EHC30048.1| ATP synthase epsilon chain [Salmonella enterica subsp. enterica
           serovar Adelaide str. A4-669]
 gi|353564035|gb|EHC30221.1| ATP synthase epsilon chain [Salmonella enterica subsp. enterica
           serovar Gaminara str. A4-567]
 gi|353564271|gb|EHC30384.1| ATP synthase epsilon chain [Salmonella enterica subsp. enterica
           serovar Alachua str. R6-377]
 gi|353583363|gb|EHC43739.1| ATP synthase epsilon chain [Salmonella enterica subsp. enterica
           serovar Give str. S5-487]
 gi|353584603|gb|EHC44670.1| ATP synthase epsilon chain [Salmonella enterica subsp. enterica
           serovar Hvittingfoss str. A4-620]
 gi|353591681|gb|EHC49891.1| ATP synthase epsilon chain [Salmonella enterica subsp. enterica
           serovar Inverness str. R8-3668]
 gi|353602022|gb|EHC57497.1| ATP synthase epsilon chain [Salmonella enterica subsp. enterica
           serovar Johannesburg str. S5-703]
 gi|353605281|gb|EHC59832.1| ATP synthase epsilon chain [Salmonella enterica subsp. enterica
           serovar Minnesota str. A4-603]
 gi|353613456|gb|EHC65556.1| ATP synthase epsilon chain [Salmonella enterica subsp. enterica
           serovar Mississippi str. A4-633]
 gi|353624030|gb|EHC73163.1| ATP synthase epsilon chain [Salmonella enterica subsp. enterica
           serovar Montevideo str. S5-403]
 gi|353631463|gb|EHC78760.1| ATP synthase epsilon chain [Salmonella enterica subsp. enterica
           serovar Rubislaw str. A4-653]
 gi|353633399|gb|EHC80215.1| ATP synthase epsilon chain [Salmonella enterica subsp. enterica
           serovar Senftenberg str. A4-543]
 gi|353641112|gb|EHC85927.1| ATP synthase epsilon chain [Salmonella enterica subsp. enterica
           serovar Uganda str. R8-3404]
 gi|353657574|gb|EHC97979.1| ATP synthase epsilon chain [Salmonella enterica subsp. enterica
           serovar Urbana str. R8-2977]
 gi|353658053|gb|EHC98345.1| ATP synthase epsilon chain [Salmonella enterica subsp. enterica
           serovar Wandsworth str. A4-580]
 gi|357953624|gb|EHJ80106.1| ATP synthase epsilon chain [Salmonella enterica subsp. enterica
           serovar Baildon str. R6-199]
 gi|363653047|gb|EHL92040.1| ATP synthase epsilon chain [Klebsiella sp. 4_1_44FAA]
 gi|366058019|gb|EHN22312.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. CT_02035318]
 gi|366066348|gb|EHN30519.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. CT_02035320]
 gi|366068829|gb|EHN32962.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. CT_02035278]
 gi|366072877|gb|EHN36959.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. CT_02035321]
 gi|366083406|gb|EHN47328.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. CT_02035327]
 gi|366828618|gb|EHN55500.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|372205522|gb|EHP19031.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008286]
 gi|374355685|gb|AEZ47446.1| hypothetical protein STBHUCCB_38450 [Salmonella enterica subsp.
           enterica serovar Typhi str. P-stx-12]
 gi|379983602|emb|CCF90239.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Senftenberg str. SS209]
 gi|380465312|gb|AFD60715.1| ATP synthase epsilon subunit [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 798]
 gi|381295431|gb|EIC36544.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Heidelberg str. 41579]
 gi|381297853|gb|EIC38938.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Heidelberg str. 41563]
 gi|381303798|gb|EIC44816.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Heidelberg str. 41573]
 gi|381310400|gb|EIC51230.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Heidelberg str. 41565]
 gi|381310514|gb|EIC51342.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Heidelberg str. 41566]
 gi|392744666|gb|EJA01711.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 33953]
 gi|392759194|gb|EJA16049.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 21559]
 gi|392766549|gb|EJA23323.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 19447]
 gi|392794432|gb|EJA50847.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 21538]
 gi|392794983|gb|EJA51368.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 22425]
 gi|392825211|gb|EJA80965.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 19593]
 gi|395991624|gb|EJI00747.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 640631]
 gi|395993957|gb|EJI03046.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 622731-39]
 gi|395994141|gb|EJI03221.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 639016-6]
 gi|395998196|gb|EJI07229.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 77-0424]
 gi|395999032|gb|EJI08055.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 607307-6]
 gi|396006943|gb|EJI15903.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 485549-17]
 gi|396011959|gb|EJI20859.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 596866-22]
 gi|396013053|gb|EJI21942.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 596866-70]
 gi|396020223|gb|EJI29069.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 629164-26]
 gi|396026322|gb|EJI35091.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 639672-46]
 gi|396034073|gb|EJI42776.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 639672-50]
 gi|396034246|gb|EJI42947.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 629164-37]
 gi|396038949|gb|EJI47580.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 78-1757]
 gi|396039516|gb|EJI48141.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 77-2659]
 gi|396048128|gb|EJI56688.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 77-1427]
 gi|396053387|gb|EJI61883.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 22510-1]
 gi|396055666|gb|EJI64149.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648905 5-18]
 gi|396060493|gb|EJI68937.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 8b-1]
 gi|396066398|gb|EJI74762.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 50-3079]
 gi|396067995|gb|EJI76344.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 58-6482]
 gi|396074710|gb|EJI82995.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648901 6-18]
 gi|397346756|gb|EJJ39869.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH1]
 gi|397348605|gb|EJJ41704.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH4]
 gi|397348927|gb|EJJ42024.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH2]
 gi|397362343|gb|EJJ54994.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH5]
 gi|397363810|gb|EJJ56446.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH6]
 gi|397366984|gb|EJJ59598.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH7]
 gi|397377147|gb|EJJ69388.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH9]
 gi|397380009|gb|EJJ72195.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH8]
 gi|397386772|gb|EJJ78835.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH10]
 gi|397394344|gb|EJJ86075.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH11]
 gi|397396760|gb|EJJ88446.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH12]
 gi|397403148|gb|EJJ94733.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH14]
 gi|397411358|gb|EJK02617.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH17]
 gi|397411897|gb|EJK03142.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH16]
 gi|397421397|gb|EJK12417.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH18]
 gi|397429137|gb|EJK19857.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH19]
 gi|397430127|gb|EJK20828.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH20]
 gi|397440349|gb|EJK30758.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH21]
 gi|397447045|gb|EJK37249.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH22]
 gi|397450529|gb|EJK40632.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH23]
 gi|402516330|gb|EJW23742.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Heidelberg str. CFSAN00326]
 gi|402518956|gb|EJW26322.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Heidelberg str. CFSAN00325]
 gi|402526544|gb|EJW33818.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Heidelberg str. CFSAN00322]
 gi|402533169|gb|EJW40352.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Heidelberg str. CFSAN00328]
 gi|405595618|gb|EKB68988.1| ATP synthase epsilon chain [Klebsiella pneumoniae subsp. pneumoniae
           WGLW1]
 gi|405598393|gb|EKB71622.1| ATP synthase epsilon chain [Klebsiella pneumoniae subsp. pneumoniae
           WGLW2]
 gi|405608204|gb|EKB81155.1| ATP synthase epsilon chain [Klebsiella pneumoniae subsp. pneumoniae
           WGLW3]
 gi|405610512|gb|EKB83316.1| ATP synthase epsilon chain [Klebsiella pneumoniae subsp. pneumoniae
           WGLW5]
 gi|407805249|gb|EKF76500.1| ATP synthase epsilon chain [Klebsiella pneumoniae subsp. pneumoniae
           KpQ3]
 gi|414012652|gb|EKS96565.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm1]
 gi|414013797|gb|EKS97670.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm8]
 gi|414014186|gb|EKS98038.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm2]
 gi|414027657|gb|EKT10874.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm9]
 gi|414028594|gb|EKT11773.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm3]
 gi|414031014|gb|EKT14093.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm4]
 gi|414042038|gb|EKT24589.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm6]
 gi|414042819|gb|EKT25349.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm10]
 gi|414055833|gb|EKT37700.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm12]
 gi|414062264|gb|EKT43595.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm5]
 gi|414710549|emb|CCN32253.1| ATP synthase F1, epsilon subunit [Klebsiella pneumoniae subsp.
           pneumoniae Ecl8]
 gi|426304739|gb|EKV66876.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae VA360]
 gi|426307618|gb|EKV69696.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae JHCK1]
 gi|434940579|gb|ELL47184.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Pullorum str. ATCC 9120]
 gi|434959018|gb|ELL52529.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. SE30663]
 gi|434959371|gb|ELL52845.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CHS44]
 gi|434966157|gb|ELL59044.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1882]
 gi|434971250|gb|ELL63784.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1884]
 gi|434978670|gb|ELL70670.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 22704]
 gi|434982007|gb|ELL73847.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1594]
 gi|434991222|gb|ELL82736.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1566]
 gi|434992506|gb|ELL83955.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1580]
 gi|434999039|gb|ELL90247.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1543]
 gi|435004343|gb|ELL95317.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1441]
 gi|435004864|gb|ELL95806.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1810]
 gi|435012241|gb|ELM02926.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1558]
 gi|435015374|gb|ELM05913.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1010]
 gi|435019793|gb|ELM10228.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1018]
 gi|435023983|gb|ELM14216.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1729]
 gi|435033311|gb|ELM23214.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_0895]
 gi|435035884|gb|ELM25723.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_0899]
 gi|435037432|gb|ELM27243.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1457]
 gi|435041666|gb|ELM31406.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1747]
 gi|435049526|gb|ELM39052.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1444]
 gi|435049734|gb|ELM39249.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_0968]
 gi|435056220|gb|ELM45612.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1445]
 gi|435060723|gb|ELM49969.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1565]
 gi|435071048|gb|ELM60006.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1559]
 gi|435074344|gb|ELM63177.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1808]
 gi|435084038|gb|ELM72632.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_0956]
 gi|435087058|gb|ELM75577.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1811]
 gi|435087566|gb|ELM76062.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1455]
 gi|435089779|gb|ELM78197.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1725]
 gi|435096612|gb|ELM84879.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1745]
 gi|435100368|gb|ELM88545.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1575]
 gi|435104421|gb|ELM92475.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1791]
 gi|435114155|gb|ELN01968.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1795]
 gi|435118281|gb|ELN05948.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 576709]
 gi|435124289|gb|ELN11755.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 635290-58]
 gi|435125333|gb|ELN12777.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 607308-16]
 gi|435129643|gb|ELN16932.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 607308-19]
 gi|435134121|gb|ELN21255.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 607308-9]
 gi|435139032|gb|ELN26038.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 607307-2]
 gi|435140686|gb|ELN27646.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 629163]
 gi|435140837|gb|ELN27781.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. SE15-1]
 gi|435153573|gb|ELN40180.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CVM_56-3991]
 gi|435154825|gb|ELN41384.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CVM_N202]
 gi|435162811|gb|ELN48969.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CVM_81-2490]
 gi|435166129|gb|ELN52130.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CVM_76-3618]
 gi|435170899|gb|ELN56624.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. SL913]
 gi|435186678|gb|ELN71496.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CVM_69-4941]
 gi|435187647|gb|ELN72391.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 638970-15]
 gi|435190426|gb|ELN75013.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 17927]
 gi|435197656|gb|ELN81933.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CHS4]
 gi|435201845|gb|ELN85718.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 543463 22-17]
 gi|435209792|gb|ELN93079.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 22558]
 gi|435209896|gb|ELN93176.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 543463 40-18]
 gi|435216931|gb|ELN99393.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 13183-1]
 gi|435222599|gb|ELO04696.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 561362 1-1]
 gi|435227071|gb|ELO08604.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 642044 4-1]
 gi|435227842|gb|ELO09294.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 642046 4-7]
 gi|435237241|gb|ELO17937.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648898 4-5]
 gi|435237840|gb|ELO18497.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648900 1-16]
 gi|435250025|gb|ELO29780.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648901 1-17]
 gi|435250751|gb|ELO30469.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648899 3-17]
 gi|435252847|gb|ELO32340.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648901 39-2]
 gi|435254350|gb|ELO33752.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648903 1-6]
 gi|435263772|gb|ELO42806.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648902 6-8]
 gi|435271792|gb|ELO50231.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 642044 8-1]
 gi|435272888|gb|ELO51263.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 653049 13-19]
 gi|435274663|gb|ELO52762.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 561362 9-7]
 gi|435278993|gb|ELO56814.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648904 3-6]
 gi|435285898|gb|ELO63258.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 543463 42-20]
 gi|435286845|gb|ELO64085.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648901 16-16]
 gi|435300550|gb|ELO76633.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. SARB17]
 gi|435303817|gb|ELO79649.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 33944]
 gi|435307277|gb|ELO82455.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 76-2651]
 gi|435312646|gb|ELO86514.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 6.0562-1]
 gi|435316447|gb|ELO89585.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 81-2625]
 gi|435326981|gb|ELO98760.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 62-1976]
 gi|435333412|gb|ELP04231.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 53-407]
 gi|435338214|gb|ELP07559.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 50-5646]
 gi|436410967|gb|ELP08924.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Agona str. SH08SF124]
 gi|436411382|gb|ELP09334.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Agona str. SH10GFN094]
 gi|436422732|gb|ELP20560.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Agona str. SH11G1113]
 gi|444849197|gb|ELX74312.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Dublin str. SL1438]
 gi|444850515|gb|ELX75614.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9184]
 gi|444852908|gb|ELX77982.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Dublin str. HWS51]
 gi|444865305|gb|ELX90079.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. SE8a]
 gi|444869304|gb|ELX93897.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. SE10]
 gi|444871673|gb|ELX96075.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 20037]
 gi|444878356|gb|ELY02475.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 13-1]
 gi|444878519|gb|ELY02634.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 18569]
 gi|444885405|gb|ELY09196.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. PT23]
 gi|444890217|gb|ELY13572.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 436]
 gi|448876862|gb|EMB11839.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae hvKP1]
 gi|451911349|gb|AGF83155.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Javiana str. CFSAN001992]
          Length = 139

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    SV +
Sbjct: 21  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQ-PGSVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  + S         AS+E AKA A++ V
Sbjct: 80  LADTAIRGQDLDEARALEAKRKAEEHIKSSHGDVDYAQASAELAKAIAKLRV 131


>gi|378581555|ref|ZP_09830200.1| F1 sector of membrane-bound ATP synthase, epsilon subunit [Pantoea
           stewartii subsp. stewartii DC283]
 gi|377815725|gb|EHT98835.1| F1 sector of membrane-bound ATP synthase, epsilon subunit [Pantoea
           stewartii subsp. stewartii DC283]
          Length = 139

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V   S+  +
Sbjct: 21  VQKIQVSGSEGELGIFPGHAPLLTAIKPGMIRIVKQHGEEEFIYLSGGVLEVQPGSTT-V 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  ++S         AS+E AKA A++ V
Sbjct: 80  LADTAIRGTDLDEARALEAKRKAEEHMNSSHGDVDYAQASAELAKAIAKLRV 131


>gi|253702619|ref|YP_003023808.1| F0F1 ATP synthase subunit epsilon [Geobacter sp. M21]
 gi|259585484|sp|C6E9F0.1|ATPE_GEOSM RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|251777469|gb|ACT20050.1| ATP synthase F1, epsilon subunit [Geobacter sp. M21]
          Length = 138

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 2/83 (2%)

Query: 48  GAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDS 107
           G FG+LP H P L  LK G +  Y  +GVS  + ++ G   V +D +V ++ E A   D 
Sbjct: 31  GEFGVLPGHAPFLTSLKIGELA-YRKDGVSHHMALNWGYFEVEND-TVTVLVETAEKADE 88

Query: 108 LDASAARDVLSKAQSELSSASSE 130
           +D   A+  L +A+ EL + + E
Sbjct: 89  IDLERAKAALGRAEVELKALTPE 111


>gi|91975040|ref|YP_567699.1| F0F1 ATP synthase subunit epsilon [Rhodopseudomonas palustris
           BisB5]
 gi|91681496|gb|ABE37798.1| ATP synthase F1, epsilon subunit [Rhodopseudomonas palustris BisB5]
          Length = 151

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 3/87 (3%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F L S  +V ++ + V QVD+P   G FG+L  H P +A+++PG++TV    G  QKI V
Sbjct: 22  FDLVSPEQVAFSGE-VDQVDIPGAEGDFGVLAGHAPVVAVIRPGILTV-TAGGAQQKIVV 79

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLD 109
             G   V+ +  + ++A+ A  V  LD
Sbjct: 80  LGGIAEVS-EKGLTVLADVATAVADLD 105


>gi|91785732|ref|YP_560938.1| F0F1 ATP synthase subunit epsilon [Burkholderia xenovorans LB400]
 gi|119361396|sp|Q13SQ3.1|ATPE1_BURXL RecName: Full=ATP synthase epsilon chain 1; AltName: Full=ATP
           synthase F1 sector epsilon subunit 1; AltName:
           Full=F-ATPase epsilon subunit 1
 gi|91689686|gb|ABE32886.1| ATP synthase F1 subcomplex epsilon subunit [Burkholderia xenovorans
           LB400]
          Length = 141

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 3/108 (2%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  +G  GILP H P +  ++PG + +    G  + +FV+ G + V    +V ++
Sbjct: 21  KFVALPGEAGELGILPGHTPLITRIRPGAVRIEAENGEEEFVFVAGGILEVQ-PGAVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASS--ETAKAEAQIAVEVAE 144
           A+ A     LD + A D   +A+  L +  S  E A A+A++A   A+
Sbjct: 80  ADTAIRGKDLDEAKAEDARKRAEEALQNTGSNLEYATAQAELAYATAQ 127


>gi|157368258|ref|YP_001476247.1| F0F1 ATP synthase subunit epsilon [Serratia proteamaculans 568]
 gi|270264095|ref|ZP_06192362.1| ATP synthase F1, epsilon subunit [Serratia odorifera 4Rx13]
 gi|333929826|ref|YP_004503405.1| ATP synthase F1 subunit epsilon [Serratia sp. AS12]
 gi|333934779|ref|YP_004508357.1| ATP synthase F1 subunit epsilon [Serratia plymuthica AS9]
 gi|386331649|ref|YP_006027819.1| ATP synthase F1 subunit epsilon [Serratia sp. AS13]
 gi|386825693|ref|ZP_10112813.1| F0F1 ATP synthase subunit epsilon [Serratia plymuthica PRI-2C]
 gi|421786310|ref|ZP_16222718.1| ATP synthase F1, epsilon subunit [Serratia plymuthica A30]
 gi|259585491|sp|A8G7M9.1|ATPE_SERP5 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|157320022|gb|ABV39119.1| ATP synthase F1, epsilon subunit [Serratia proteamaculans 568]
 gi|270041744|gb|EFA14841.1| ATP synthase F1, epsilon subunit [Serratia odorifera 4Rx13]
 gi|333476386|gb|AEF48096.1| ATP synthase F1, epsilon subunit [Serratia plymuthica AS9]
 gi|333493886|gb|AEF53048.1| ATP synthase F1, epsilon subunit [Serratia sp. AS12]
 gi|333963982|gb|AEG30755.1| ATP synthase F1, epsilon subunit [Serratia sp. AS13]
 gi|386377435|gb|EIJ18252.1| F0F1 ATP synthase subunit epsilon [Serratia plymuthica PRI-2C]
 gi|407751555|gb|EKF61730.1| ATP synthase F1, epsilon subunit [Serratia plymuthica A30]
          Length = 139

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG++ + +  G  + I++S G + V   S V +
Sbjct: 21  VQKIQVTGSEGELGIFPGHAPLLTAIKPGMVRIVKQHGEEEFIYLSGGILEVQ-PSVVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  +SS         AS+E AKA A++ V
Sbjct: 80  LADTAIRGTDLDEARALEAKRKAEEHISSSHGDVDYAQASAELAKAIAKLRV 131


>gi|429119345|ref|ZP_19180067.1| ATP synthase epsilon chain [Cronobacter sakazakii 680]
 gi|426326126|emb|CCK10804.1| ATP synthase epsilon chain [Cronobacter sakazakii 680]
          Length = 139

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 21  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEYIYLSGGVLEVQ-PGNVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  + S         AS+E AKA A++ V
Sbjct: 80  LADTAIRGQDLDEARALEAKRKAEDHIRSSHGDVDYAQASTELAKAIAKLRV 131


>gi|398821695|ref|ZP_10580129.1| ATP synthase, F1 epsilon subunit [Bradyrhizobium sp. YR681]
 gi|398227649|gb|EJN13837.1| ATP synthase, F1 epsilon subunit [Bradyrhizobium sp. YR681]
          Length = 135

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 2/69 (2%)

Query: 23 FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
          F L S  K+ ++ + V QVD+P   G FG+L  H P +A ++PG++T+  T G  +K+ V
Sbjct: 6  FDLVSPEKLAFSGE-VDQVDIPGVEGDFGVLAGHAPVVAAIRPGILTIT-TGGKHEKVIV 63

Query: 83 SSGTITVND 91
            G   V+D
Sbjct: 64 LGGLAEVSD 72


>gi|260595803|ref|YP_003208374.1| F0F1 ATP synthase subunit epsilon [Cronobacter turicensis z3032]
 gi|429088822|ref|ZP_19151554.1| ATP synthase epsilon chain [Cronobacter universalis NCTC 9529]
 gi|260214980|emb|CBA26616.1| ATP synthase epsilon chain [Cronobacter turicensis z3032]
 gi|426508625|emb|CCK16666.1| ATP synthase epsilon chain [Cronobacter universalis NCTC 9529]
          Length = 139

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 21  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEYIYLSGGVLEVQ-PGTVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  + S         AS+E AKA A++ V
Sbjct: 80  LADTAIRGQDLDEARALEAKRKAEDHIRSSHGDVDYAQASAELAKAIAKLRV 131


>gi|424801795|ref|ZP_18227337.1| ATP synthase epsilon chain [Cronobacter sakazakii 696]
 gi|423237516|emb|CCK09207.1| ATP synthase epsilon chain [Cronobacter sakazakii 696]
          Length = 141

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 62/114 (54%), Gaps = 4/114 (3%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 19  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEYIYLSGGVLEVQ-PGNVTV 77

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSSASSET--AKAEAQIAVEVAEALKIF 149
           +A+ A     LD + A +   KA+  + S+  +   A+A A++A  +A+ L+++
Sbjct: 78  LADTAIRGQDLDEARALEAKRKAEDHIRSSHGDVDYAQASAELAKAIAK-LRVY 130


>gi|319898004|ref|YP_004136201.1| f1 sector of membrane-bound ATP synthase, epsilon subunit
           [Haemophilus influenzae F3031]
 gi|317433510|emb|CBY81893.1| F1 sector of membrane-bound ATP synthase, epsilon subunit
           [Haemophilus influenzae F3031]
          Length = 142

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 2/110 (1%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
            + T+ S  +  +  + VKQ+ V    G  GILP H P L  +KPG++     +G  + I
Sbjct: 4   FNLTIVSAEQKIFEGE-VKQIQVTGVEGELGILPGHTPLLTAIKPGIVKFTLKDGNEEVI 62

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
           +VS G + V  +  V ++A+ A     LDA   ++   KA+  + S  S+
Sbjct: 63  YVSGGFLEVQPN-IVTVLADIAIRGSELDADRIQEAKRKAEENIVSRGSD 111


>gi|167995200|ref|ZP_02576290.1| ATP synthase F1, epsilon subunit [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|194449632|ref|YP_002047893.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194469127|ref|ZP_03075111.1| ATP synthase F1, epsilon subunit [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194734799|ref|YP_002116805.1| ATP synthase F0F1 subunit epsilon [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195873813|ref|ZP_02698693.2| ATP synthase F1, epsilon subunit [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197263984|ref|ZP_03164058.1| ATP synthase F1, epsilon subunit [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197301260|ref|ZP_02664829.2| ATP synthase F1, epsilon subunit [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|198242576|ref|YP_002217810.1| ATP synthase F0F1 subunit epsilon [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|200386580|ref|ZP_03213192.1| ATP synthase F1, epsilon subunit [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204928544|ref|ZP_03219743.1| ATP synthase F1, epsilon subunit [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205358835|ref|ZP_02659511.2| ATP synthase F1, epsilon subunit [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205359460|ref|ZP_02670176.2| ATP synthase F1, epsilon subunit [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205360195|ref|ZP_02835201.2| ATP synthase F1, epsilon subunit [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205360625|ref|ZP_02685213.2| ATP synthase F1, epsilon subunit [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|213021437|ref|ZP_03335884.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
 gi|213420921|ref|ZP_03353987.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
 gi|213586048|ref|ZP_03367874.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213646873|ref|ZP_03376926.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|238913117|ref|ZP_04656954.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|289826258|ref|ZP_06545370.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|374982729|ref|ZP_09724049.1| ATP synthase epsilon chain [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|378957294|ref|YP_005214781.1| ATP synthase subunit epsilon [Salmonella enterica subsp. enterica
           serovar Gallinarum/pullorum str. RKS5078]
 gi|378981465|ref|YP_005229606.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae HS11286]
 gi|378986566|ref|YP_005249722.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|386593534|ref|YP_006089934.1| ATP synthase subunit epsilon [Salmonella enterica subsp. enterica
           serovar Heidelberg str. B182]
 gi|402783235|ref|YP_006638781.1| ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae 1084]
 gi|416432517|ref|ZP_11696242.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|416437709|ref|ZP_11698995.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|416443042|ref|ZP_11702752.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|416450197|ref|ZP_11707330.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|416461158|ref|ZP_11715206.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|416464005|ref|ZP_11716169.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|416479691|ref|ZP_11722474.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|416489177|ref|ZP_11726052.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|416501075|ref|ZP_11731880.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|416508453|ref|ZP_11736089.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. SARB31]
 gi|416517505|ref|ZP_11739515.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. ATCC BAA710]
 gi|416531268|ref|ZP_11745553.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. LQC 10]
 gi|416540224|ref|ZP_11750346.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. SARB30]
 gi|416548689|ref|ZP_11754979.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 29N]
 gi|416556842|ref|ZP_11759166.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 42N]
 gi|416567551|ref|ZP_11764323.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 4441 H]
 gi|416581058|ref|ZP_11772319.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|416582857|ref|ZP_11773021.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|416593057|ref|ZP_11779610.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|416602751|ref|ZP_11785416.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|416603627|ref|ZP_11785562.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|416613026|ref|ZP_11791929.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|416625013|ref|ZP_11798411.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|416626830|ref|ZP_11798837.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|416641384|ref|ZP_11805471.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|416698016|ref|ZP_11828300.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|416703480|ref|ZP_11829607.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|416711845|ref|ZP_11835590.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|416716074|ref|ZP_11838585.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|416726973|ref|ZP_11847002.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|416744295|ref|ZP_11856562.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|416755085|ref|ZP_11861818.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|416760553|ref|ZP_11864878.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|418483060|ref|ZP_13052071.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 80959-06]
 gi|418514340|ref|ZP_13080547.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Pomona str. ATCC 10729]
 gi|418760190|ref|ZP_13316349.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 35185]
 gi|418766316|ref|ZP_13322394.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 35199]
 gi|418771122|ref|ZP_13327136.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 21539]
 gi|418782046|ref|ZP_13337914.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 35188]
 gi|418791556|ref|ZP_13347314.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 19449]
 gi|418797144|ref|ZP_13352834.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 19567]
 gi|418804122|ref|ZP_13359732.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 35202]
 gi|418807050|ref|ZP_13362618.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 21550]
 gi|418811211|ref|ZP_13366747.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 22513]
 gi|418825408|ref|ZP_13380702.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 22462]
 gi|418829291|ref|ZP_13384275.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM N18486]
 gi|418834907|ref|ZP_13389808.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM N1543]
 gi|418839191|ref|ZP_13394030.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 21554]
 gi|418845822|ref|ZP_13400600.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 19443]
 gi|418849518|ref|ZP_13404249.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 37978]
 gi|418860052|ref|ZP_13414638.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 19470]
 gi|418864830|ref|ZP_13419351.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 19536]
 gi|418868068|ref|ZP_13422512.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 4176]
 gi|419788115|ref|ZP_14313813.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. Levine 1]
 gi|419791033|ref|ZP_14316689.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. Levine 15]
 gi|421918905|ref|ZP_16348417.1| ATP synthase epsilon chain [Klebsiella pneumoniae subsp. pneumoniae
           ST258-K28BO]
 gi|428148874|ref|ZP_18996720.1| ATP synthase epsilon chain [Klebsiella pneumoniae subsp. pneumoniae
           ST512-K30BO]
 gi|194407936|gb|ACF68155.1| ATP synthase F1, epsilon subunit [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194455491|gb|EDX44330.1| ATP synthase F1, epsilon subunit [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194710301|gb|ACF89522.1| ATP synthase F1, epsilon subunit [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195632458|gb|EDX50942.1| ATP synthase F1, epsilon subunit [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197242239|gb|EDY24859.1| ATP synthase F1, epsilon subunit [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197287571|gb|EDY26963.1| ATP synthase F1, epsilon subunit [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|197937092|gb|ACH74425.1| ATP synthase F1, epsilon subunit [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|199603678|gb|EDZ02223.1| ATP synthase F1, epsilon subunit [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204321977|gb|EDZ07175.1| ATP synthase F1, epsilon subunit [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205327080|gb|EDZ13844.1| ATP synthase F1, epsilon subunit [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205331631|gb|EDZ18395.1| ATP synthase F1, epsilon subunit [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205336001|gb|EDZ22765.1| ATP synthase F1, epsilon subunit [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205340518|gb|EDZ27282.1| ATP synthase F1, epsilon subunit [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205348143|gb|EDZ34774.1| ATP synthase F1, epsilon subunit [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|312914995|dbj|BAJ38969.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321222160|gb|EFX47233.1| ATP synthase epsilon chain [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322619089|gb|EFY15975.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322625156|gb|EFY21984.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322630207|gb|EFY26978.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322634368|gb|EFY31102.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322635252|gb|EFY31967.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322642871|gb|EFY39456.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322645075|gb|EFY41605.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322650424|gb|EFY46836.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322653616|gb|EFY49943.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322661638|gb|EFY57857.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322669800|gb|EFY65942.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322671993|gb|EFY68112.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322674996|gb|EFY71082.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322683686|gb|EFY79699.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686073|gb|EFY82058.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323192010|gb|EFZ77247.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323200504|gb|EFZ85582.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323202733|gb|EFZ87770.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323224779|gb|EGA09044.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323232513|gb|EGA16615.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323235288|gb|EGA19373.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323241076|gb|EGA25113.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323241375|gb|EGA25407.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323258600|gb|EGA42263.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323262368|gb|EGA45926.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323268205|gb|EGA51681.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|357207905|gb|AET55951.1| ATP synthase epsilon subunit [Salmonella enterica subsp. enterica
           serovar Gallinarum/pullorum str. RKS5078]
 gi|363549512|gb|EHL33852.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. LQC 10]
 gi|363552276|gb|EHL36569.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. SARB31]
 gi|363559266|gb|EHL43434.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. SARB30]
 gi|363560454|gb|EHL44599.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. ATCC BAA710]
 gi|363570811|gb|EHL54733.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 29N]
 gi|363578693|gb|EHL62496.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 4441 H]
 gi|363579206|gb|EHL62998.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 42N]
 gi|364520876|gb|AEW64004.1| F0F1 ATP synthase subunit epsilon [Klebsiella pneumoniae subsp.
           pneumoniae HS11286]
 gi|366062043|gb|EHN26282.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Montevideo str. 80959-06]
 gi|366079361|gb|EHN43347.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Pomona str. ATCC 10729]
 gi|383800575|gb|AFH47657.1| ATP synthase epsilon chain [Salmonella enterica subsp. enterica
           serovar Heidelberg str. B182]
 gi|392618334|gb|EIX00736.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. Levine 1]
 gi|392621388|gb|EIX03746.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. Levine 15]
 gi|392735138|gb|EIZ92318.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 21539]
 gi|392738368|gb|EIZ95513.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 35199]
 gi|392743353|gb|EJA00426.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 35185]
 gi|392744945|gb|EJA01986.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 35188]
 gi|392769498|gb|EJA26230.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 19567]
 gi|392771660|gb|EJA28377.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 19449]
 gi|392771769|gb|EJA28482.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 35202]
 gi|392780123|gb|EJA36780.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 22513]
 gi|392781149|gb|EJA37794.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 21550]
 gi|392804513|gb|EJA60671.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM N1543]
 gi|392804668|gb|EJA60817.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM N18486]
 gi|392812086|gb|EJA68082.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 19443]
 gi|392813275|gb|EJA69244.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 21554]
 gi|392814916|gb|EJA70861.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 22462]
 gi|392821120|gb|EJA76951.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 37978]
 gi|392827962|gb|EJA83660.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 19470]
 gi|392829709|gb|EJA85373.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 19536]
 gi|392838525|gb|EJA94087.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 4176]
 gi|402544069|gb|AFQ68218.1| ATP synthase epsilon chain [Klebsiella pneumoniae subsp. pneumoniae
           1084]
 gi|410118858|emb|CCM91042.1| ATP synthase epsilon chain [Klebsiella pneumoniae subsp. pneumoniae
           ST258-K28BO]
 gi|427541169|emb|CCM92858.1| ATP synthase epsilon chain [Klebsiella pneumoniae subsp. pneumoniae
           ST512-K30BO]
          Length = 137

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    SV +
Sbjct: 19  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQ-PGSVTV 77

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  + S         AS+E AKA A++ V
Sbjct: 78  LADTAIRGQDLDEARALEAKRKAEEHIKSSHGDVDYAQASAELAKAIAKLRV 129


>gi|161616984|ref|YP_001590949.1| hypothetical protein SPAB_04805 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|161366348|gb|ABX70116.1| hypothetical protein SPAB_04805 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 124

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    SV +
Sbjct: 6   VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQ-PGSVTV 64

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  + S         AS+E AKA A++ V
Sbjct: 65  LADTAIRGQDLDEARALEAKRKAEEHIKSSHGDVDYAQASAELAKAIAKLRV 116


>gi|160895870|ref|YP_001561452.1| F0F1 ATP synthase subunit epsilon [Delftia acidovorans SPH-1]
 gi|333912097|ref|YP_004485829.1| ATP synthase F1 subunit epsilon [Delftia sp. Cs1-4]
 gi|226740244|sp|A9BPU8.1|ATPE_DELAS RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|160361454|gb|ABX33067.1| ATP synthase F1, epsilon subunit [Delftia acidovorans SPH-1]
 gi|333742297|gb|AEF87474.1| ATP synthase F1, epsilon subunit [Delftia sp. Cs1-4]
          Length = 138

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 5/113 (4%)

Query: 41  VDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAE 100
           V +P  SG  GI P H P +  +KPG + +   +G  + +FV+ G + V  +  V ++++
Sbjct: 23  VALPGESGELGIFPRHTPLITRIKPGSVRIEMADGSEEFVFVAGGILEVQPN-CVTVLSD 81

Query: 101 EAHPVDSLDASAARDVLSKAQSELSSASSET--AKAEAQIAVEVAE--ALKIF 149
            A     LDA  A     +A+  L +A SE   A+A++++AV  A+  AL+ F
Sbjct: 82  TAIRGADLDAEKAEKAKLEAEEALKNAKSEVDLARAQSELAVMAAQIAALRKF 134


>gi|134294037|ref|YP_001117773.1| ATP synthase F1 subunit epsilon [Burkholderia vietnamiensis G4]
 gi|387905722|ref|YP_006336060.1| ATP synthase subunit epsilon [Burkholderia sp. KJ006]
 gi|134137194|gb|ABO58308.1| ATP synthase F1 subcomplex epsilon subunit [Burkholderia
           vietnamiensis G4]
 gi|387580614|gb|AFJ89329.1| ATP synthase epsilon chain [Burkholderia sp. KJ006]
          Length = 151

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 13/144 (9%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETE-GVSQK 79
           M   + S   V Y+  +   V VP  SG  GI P H P L  ++PGV+T+ +   G  ++
Sbjct: 5   MKLDILSVENVLYSG-DAHFVVVPGESGELGIYPRHAPLLTRIRPGVVTLVDAPSGERRR 63

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAAR------DVLSKAQSELSSASSETAK 133
           I V+ G + V+ +  V +IA+ A     LDA  AR      D   +  ++ +  + + A 
Sbjct: 64  ILVAGGVLEVSRE-GVTLIADHALRTPELDALRAREARHAADEWRRVHAQENRRAFDFAS 122

Query: 134 AEAQIAVEV----AEALKIFVSSG 153
           A A++  E+    A A++   S G
Sbjct: 123 ARAELMDEIRRFFAMAMRDHASHG 146


>gi|294638350|ref|ZP_06716603.1| ATP synthase F1, epsilon subunit [Edwardsiella tarda ATCC 23685]
 gi|451966307|ref|ZP_21919561.1| ATP synthase subunit epsilon [Edwardsiella tarda NBRC 105688]
 gi|291088603|gb|EFE21164.1| ATP synthase F1, epsilon subunit [Edwardsiella tarda ATCC 23685]
 gi|451315086|dbj|GAC64923.1| ATP synthase subunit epsilon [Edwardsiella tarda NBRC 105688]
          Length = 139

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG++ + +  G  + I++S G + V   S+V +
Sbjct: 21  VQKIQVTGSEGELGIYPGHAPLLTAIKPGMVRIVKQHGEEEFIYLSGGILEVQ-SSAVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  + S         AS+E AKA A++ V
Sbjct: 80  LADTAIRGQDLDEARAMESKRKAEEHIRSSHGDVDYAQASAELAKAIAKLRV 131


>gi|313199632|ref|YP_004021248.1| ATP synthase CF1 epsilon subunit [Isoetes flaccida]
 gi|291575361|gb|ADE18074.1| ATP synthase CF1 epsilon subunit [Isoetes flaccida]
          Length = 138

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 2/111 (1%)

Query: 35  NQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSS 94
           N  V+++ + + SG  G+LPNH P L  L  G++ V      S    +  G   + D++ 
Sbjct: 16  NSEVQEIILSTNSGQIGVLPNHAPLLTALDIGIMKVRLNGQWSTMALM--GGFAMMDNNQ 73

Query: 95  VQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEA 145
           + I+  EA     +D   AR+   KAQ++L+         EA +A + A+A
Sbjct: 74  ITILVNEAEEATEIDPEEAREAFQKAQTDLAQVEGRKQTIEANLASKRAKA 124


>gi|218781463|ref|YP_002432781.1| ATP synthase F1 subunit epsilon [Desulfatibacillum alkenivorans
           AK-01]
 gi|226740245|sp|B8FGT3.1|ATPE_DESAA RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|218762847|gb|ACL05313.1| ATP synthase F1, epsilon subunit [Desulfatibacillum alkenivorans
           AK-01]
          Length = 141

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 8/120 (6%)

Query: 36  QNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSV 95
           + V+ V  P   G FG+L  H P LA LK G +   +  G  + +F++ G       + V
Sbjct: 19  ETVQTVTAPGSEGEFGVLVGHTPFLATLKLGTLNFKDETGKVRAVFINGG-FAETLPNKV 77

Query: 96  QIIAEEAHPVDSLDASAARDVLSKAQSELSSASS----ETAK---AEAQIAVEVAEALKI 148
            ++AE A     +DA   R  L +AQ  L S  +    E AK   A AQ  + +AE+ K+
Sbjct: 78  TVLAESAERRCDIDADRCRLALERAQQRLESKENAVDFERAKRALARAQTRMSLAESRKM 137


>gi|383192287|ref|YP_005202415.1| ATP synthase F1 subunit epsilon [Rahnella aquatilis CIP 78.65 =
           ATCC 33071]
 gi|371590545|gb|AEX54275.1| ATP synthase, F1 epsilon subunit [Rahnella aquatilis CIP 78.65 =
           ATCC 33071]
          Length = 140

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG++ + +  G  + I++S G + V  +++  +
Sbjct: 22  VQKIQVTGSEGELGIFPGHAPLLTAIKPGMVRIVKEHGEEEYIYLSGGILEVQPNATT-V 80

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  +S          AS+E AKA A++ V
Sbjct: 81  LADTAIRGQDLDEARALEAKRKAEEHISGSHGDVDYAQASAELAKAIAKLRV 132


>gi|156936111|ref|YP_001440027.1| F0F1 ATP synthase subunit epsilon [Cronobacter sakazakii ATCC
           BAA-894]
 gi|389842906|ref|YP_006344990.1| F0F1 ATP synthase subunit epsilon [Cronobacter sakazakii ES15]
 gi|417790383|ref|ZP_12437939.1| F0F1 ATP synthase subunit epsilon [Cronobacter sakazakii E899]
 gi|429117466|ref|ZP_19178384.1| ATP synthase epsilon chain [Cronobacter sakazakii 701]
 gi|449310208|ref|YP_007442564.1| F0F1 ATP synthase subunit epsilon [Cronobacter sakazakii SP291]
 gi|166222457|sp|A7MMW8.1|ATPE_ENTS8 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|156534365|gb|ABU79191.1| hypothetical protein ESA_04005 [Cronobacter sakazakii ATCC BAA-894]
 gi|333955509|gb|EGL73256.1| F0F1 ATP synthase subunit epsilon [Cronobacter sakazakii E899]
 gi|387853382|gb|AFK01480.1| F0F1 ATP synthase subunit epsilon [Cronobacter sakazakii ES15]
 gi|426320595|emb|CCK04497.1| ATP synthase epsilon chain [Cronobacter sakazakii 701]
 gi|449100241|gb|AGE88275.1| F0F1 ATP synthase subunit epsilon [Cronobacter sakazakii SP291]
          Length = 139

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 21  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEYIYLSGGVLEVQ-PGNVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  + S         AS+E AKA A++ V
Sbjct: 80  LADTAIRGQDLDEARALEAKRKAEDHIRSSHGDVDYAQASAELAKAIAKLRV 131


>gi|269140875|ref|YP_003297576.1| F0F1-type ATP synthase subunit epsilon [Edwardsiella tarda EIB202]
 gi|387869320|ref|YP_005700789.1| ATP synthase subunit epsilon [Edwardsiella tarda FL6-60]
 gi|267986536|gb|ACY86365.1| F0F1-type ATP synthase, epsilon subunit [Edwardsiella tarda EIB202]
 gi|304560633|gb|ADM43297.1| ATP synthase epsilon chain [Edwardsiella tarda FL6-60]
          Length = 139

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG++ + +  G  + I++S G + V   S+V +
Sbjct: 21  VQKIQVTGSEGELGIYPGHAPLLTAIKPGMVRIVKQHGEEEFIYLSGGILEVQ-SSAVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  + S         AS+E AKA A++ V
Sbjct: 80  LADTAIRGQDLDEARAMESKRKAEEHIRSSHGDVDYAQASAELAKAIAKLRV 131


>gi|429084768|ref|ZP_19147760.1| ATP synthase epsilon chain [Cronobacter condimenti 1330]
 gi|426546155|emb|CCJ73801.1| ATP synthase epsilon chain [Cronobacter condimenti 1330]
          Length = 137

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 19  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEYIYLSGGVMEVQ-PGNVTV 77

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  + S         AS+E AKA A++ V
Sbjct: 78  LADTAIRGQDLDEARALEAKRKAEEHIRSSHGDVDYAQASAELAKAIAKLRV 129


>gi|393777127|ref|ZP_10365420.1| ATP synthase, F1 sector, epsilon subunit [Ralstonia sp. PBA]
 gi|392715828|gb|EIZ03409.1| ATP synthase, F1 sector, epsilon subunit [Ralstonia sp. PBA]
          Length = 138

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 1/99 (1%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  +G  GILP H P +  +KPG + +   EG  + +FV+ G + V  +  V ++
Sbjct: 21  KFVALPGEAGELGILPGHTPLITRIKPGAVRIESAEGSEEFVFVAGGILEVQPN-LVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           A+ A     LD + A +    A+  L + SSE   A AQ
Sbjct: 80  ADTAIRGKDLDEAKASEAKRAAEEALQNQSSELDLARAQ 118


>gi|292490159|ref|YP_003533054.1| membrane-bound ATP synthase, F1 sector subunit epsilon [Erwinia
           amylovora CFBP1430]
 gi|292901161|ref|YP_003540530.1| ATP synthase subunit epsilon [Erwinia amylovora ATCC 49946]
 gi|428787149|ref|ZP_19004625.1| membrane-bound ATP synthase, F1 sector, epsilon-subunit [Erwinia
           amylovora ACW56400]
 gi|291201009|emb|CBJ48148.1| ATP synthase epsilon subunit [Erwinia amylovora ATCC 49946]
 gi|291555601|emb|CBA24218.1| membrane-bound ATP synthase, F1 sector, epsilon-subunit [Erwinia
           amylovora CFBP1430]
 gi|312174352|emb|CBX82605.1| membrane-bound ATP synthase, F1 sector, epsilon-subunit [Erwinia
           amylovora ATCC BAA-2158]
 gi|426274616|gb|EKV52358.1| membrane-bound ATP synthase, F1 sector, epsilon-subunit [Erwinia
           amylovora ACW56400]
          Length = 139

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+ + V    G  GI PNH P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 21  VQSIQVSGSEGELGIRPNHAPLLTAIKPGMIRIVKQYGEEEVIYLSGGVLEVQ-PGAVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  ++S         AS+E AKA A++ V
Sbjct: 80  LADTAIRGSDLDEARALEAKRKAEEHMNSSHGDVDFAVASAELAKAIAKLRV 131


>gi|421595390|ref|ZP_16039440.1| F0F1 ATP synthase subunit epsilon [Bradyrhizobium sp. CCGE-LA001]
 gi|404272502|gb|EJZ36132.1| F0F1 ATP synthase subunit epsilon [Bradyrhizobium sp. CCGE-LA001]
          Length = 135

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 58/102 (56%), Gaps = 3/102 (2%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F L S  K+ ++ + V QVD+P   G FG+L  H P +A ++PG++T+  T G  +KI V
Sbjct: 6   FDLVSPEKLAFSGE-VDQVDIPGVEGDFGVLAGHAPFVAAIRPGILTIT-TGGRHEKIIV 63

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSEL 124
             G   V+ +S + ++A+ A  +  LD +   + +++ +  L
Sbjct: 64  LGGLAEVS-ESGLTVLADVATSLAELDRAQFAETIAEMEENL 104


>gi|317154798|ref|YP_004122846.1| ATP synthase F1 subunit epsilon [Desulfovibrio aespoeensis Aspo-2]
 gi|316945049|gb|ADU64100.1| ATP synthase F1, epsilon subunit [Desulfovibrio aespoeensis Aspo-2]
          Length = 140

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 2/108 (1%)

Query: 36  QNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSV 95
           ++V+ V  P   G FG+LP+HVP L+ L  G +  Y+ EG +  +FVS G   V+++  V
Sbjct: 19  EDVEYVGAPGILGEFGVLPSHVPFLSALGIGNLH-YKQEGKAHYVFVSGGFAEVSNN-KV 76

Query: 96  QIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
            I+AE A     +D   A+    +A+   + A  +   A  Q A+  A
Sbjct: 77  TILAEVAEKATEIDIDRAQKARERAEERNAQAKEKIDAARNQAALRRA 124


>gi|429112294|ref|ZP_19174064.1| ATP synthase epsilon chain [Cronobacter malonaticus 507]
 gi|426313451|emb|CCK00177.1| ATP synthase epsilon chain [Cronobacter malonaticus 507]
          Length = 137

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 19  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEYIYLSGGVLEVQ-PGNVTV 77

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  + S         AS+E AKA A++ V
Sbjct: 78  LADTAIRGQDLDEARALEAKRKAEDHIRSSHGDVDYAQASAELAKAIAKLRV 129


>gi|399155131|ref|ZP_10755198.1| F0F1 ATP synthase subunit epsilon [gamma proteobacterium SCGC
           AAA007-O20]
          Length = 138

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 9/116 (7%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V  P+  G  GI P HV  ++ LKPG + V ETE   + IFVS G I V  D +V I 
Sbjct: 21  KCVFAPASLGEIGIYPMHVALISTLKPGEVRV-ETENGMESIFVSGGIIEVQPD-TVTIF 78

Query: 99  AEEAHPVDSLDASA-------ARDVLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
           ++ A   + LD S        A + +S AQ E   +S++ A AE+ + +++   ++
Sbjct: 79  SDTAIRANDLDESKALEAKQRAEEAMSNAQGEQDVSSTQAALAESLVQLQMISKMR 134


>gi|416932071|ref|ZP_11933603.1| F0F1 ATP synthase subunit epsilon [Burkholderia sp. TJI49]
 gi|325525632|gb|EGD03406.1| F0F1 ATP synthase subunit epsilon [Burkholderia sp. TJI49]
          Length = 141

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 60/108 (55%), Gaps = 3/108 (2%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  +G  GILP H P +  ++PG + +    G  + +FV+ G + V    +V ++
Sbjct: 21  KFVALPGETGELGILPGHTPLITRIRPGAVRIEVEGGNDEFVFVAGGILEVQ-PGAVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASSET--AKAEAQIAVEVAE 144
           A+ A     LD++ A +   +A+  L +A S+   AKA++++A  +A+
Sbjct: 80  ADTAIRGKDLDSAKAEEARKRAEETLQNAKSDIDLAKAQSELATAMAQ 127


>gi|238921744|ref|YP_002935259.1| ATP synthase F1, epsilon subunit, putative [Edwardsiella ictaluri
           93-146]
 gi|238871313|gb|ACR71024.1| ATP synthase F1, epsilon subunit, putative [Edwardsiella ictaluri
           93-146]
          Length = 137

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG++ + +  G  + I++S G + V   S+V +
Sbjct: 19  VQKIQVTGSEGELGIYPGHAPLLTAIKPGMVRIVKQHGEEEFIYLSGGILEVQ-SSAVTV 77

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  + S         AS+E AKA A++ V
Sbjct: 78  LADTAIRGQDLDEARAMESKRKAEEHIRSSHGDVDYAQASAELAKAIAKLRV 129


>gi|429102513|ref|ZP_19164487.1| ATP synthase epsilon chain [Cronobacter turicensis 564]
 gi|426289162|emb|CCJ90600.1| ATP synthase epsilon chain [Cronobacter turicensis 564]
          Length = 137

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 19  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEYIYLSGGVLEVQ-PGTVTV 77

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  + S         AS+E AKA A++ V
Sbjct: 78  LADTAIRGQDLDEARALEAKRKAEDHIRSSHGDVDYAQASAELAKAIAKLRV 129


>gi|85060393|ref|YP_456095.1| F0F1 ATP synthase subunit epsilon [Sodalis glossinidius str.
           'morsitans']
 gi|119367788|sp|Q2NQ85.1|ATPE_SODGM RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|84780913|dbj|BAE75690.1| ATP synthase epsilon subunit [Sodalis glossinidius str.
           'morsitans']
          Length = 140

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 60/112 (53%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG++ + +  G  + I++S G + V   S+V +
Sbjct: 22  VEKIQVTGSEGELGIFPGHAPLLTAIKPGMVRIVKEHGNEEYIYLSGGVLEVQ-PSTVTV 80

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A   + LD + A +   KA+  +++         AS+E +KA A++ V
Sbjct: 81  LADTAIRGEDLDEARAMESKRKAEEHINNSHGDIDYAQASAELSKALAKLRV 132


>gi|307731458|ref|YP_003908682.1| ATP synthase F1 subunit epsilon [Burkholderia sp. CCGE1003]
 gi|323527840|ref|YP_004229993.1| ATP synthase F1 subunit epsilon [Burkholderia sp. CCGE1001]
 gi|407715184|ref|YP_006835749.1| F-type H+-transporting ATPase subunit epsilon [Burkholderia
           phenoliruptrix BR3459a]
 gi|307585993|gb|ADN59391.1| ATP synthase F1, epsilon subunit [Burkholderia sp. CCGE1003]
 gi|323384842|gb|ADX56933.1| ATP synthase F1, epsilon subunit [Burkholderia sp. CCGE1001]
 gi|407237368|gb|AFT87567.1| F-type H+-transporting ATPase subunit epsilon [Burkholderia
           phenoliruptrix BR3459a]
          Length = 141

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 3/108 (2%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  +G  GILP H P +  ++PG + +    G  + +FV+ G + +    +V ++
Sbjct: 21  KFVALPGEAGELGILPGHTPLITRIRPGAVRIEAENGEEEFVFVAGGILEIQ-PGAVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASS--ETAKAEAQIAVEVAE 144
           A+ A     LD + A D   +A+  L +  S  E A A+A++A   A+
Sbjct: 80  ADTAIRGKDLDEAKAEDARKRAEEALQNTGSNLEYATAQAELAYATAQ 127


>gi|261341612|ref|ZP_05969470.1| hypothetical protein ENTCAN_08075 [Enterobacter cancerogenus ATCC
           35316]
 gi|296105475|ref|YP_003615621.1| F0F1 ATP synthase subunit epsilon [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|334121924|ref|ZP_08495967.1| ATP synthase F1 sector epsilon subunit [Enterobacter hormaechei
           ATCC 49162]
 gi|345301572|ref|YP_004830930.1| ATP synthase F1 subunit epsilon [Enterobacter asburiae LF7a]
 gi|354721471|ref|ZP_09035686.1| F0F1 ATP synthase subunit epsilon [Enterobacter mori LMG 25706]
 gi|365972816|ref|YP_004954377.1| ATP synthase subunit epsilon [Enterobacter cloacae EcWSU1]
 gi|392981391|ref|YP_006479979.1| F0F1 ATP synthase subunit epsilon [Enterobacter cloacae subsp.
           dissolvens SDM]
 gi|401675646|ref|ZP_10807636.1| ATP synthase F1, epsilon subunit [Enterobacter sp. SST3]
 gi|401761539|ref|YP_006576546.1| F0F1 ATP synthase subunit epsilon [Enterobacter cloacae subsp.
           cloacae ENHKU01]
 gi|288315964|gb|EFC54902.1| ATP synthase F1, epsilon subunit [Enterobacter cancerogenus ATCC
           35316]
 gi|295059934|gb|ADF64672.1| F0F1 ATP synthase subunit epsilon [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295095358|emb|CBK84448.1| ATP synthase F1 subcomplex epsilon subunit [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
 gi|333392506|gb|EGK63608.1| ATP synthase F1 sector epsilon subunit [Enterobacter hormaechei
           ATCC 49162]
 gi|345095509|gb|AEN67145.1| ATP synthase F1, epsilon subunit [Enterobacter asburiae LF7a]
 gi|365751729|gb|AEW75956.1| ATP synthase epsilon chain [Enterobacter cloacae EcWSU1]
 gi|392327324|gb|AFM62277.1| F0F1 ATP synthase subunit epsilon [Enterobacter cloacae subsp.
           dissolvens SDM]
 gi|400173073|gb|AFP67922.1| F0F1 ATP synthase subunit epsilon [Enterobacter cloacae subsp.
           cloacae ENHKU01]
 gi|400217177|gb|EJO48073.1| ATP synthase F1, epsilon subunit [Enterobacter sp. SST3]
          Length = 139

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    SV +
Sbjct: 21  VEKIQVTGSEGELGIFPGHAPLLTAIKPGMIRIVKQFGHEEFIYLSGGILEVQ-PGSVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  +SS         AS+E AKA A++ V
Sbjct: 80  LADTAIRGQDLDEARALESKRKAEEHISSSHGDVDYAQASAELAKAIAKLRV 131


>gi|167564617|ref|ZP_02357533.1| F0F1 ATP synthase subunit epsilon [Burkholderia oklahomensis EO147]
 gi|167571759|ref|ZP_02364633.1| F0F1 ATP synthase subunit epsilon [Burkholderia oklahomensis C6786]
          Length = 141

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 60/108 (55%), Gaps = 3/108 (2%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  +G  GILP H P +  ++PG + +    G  + +FV+ G + V    +V ++
Sbjct: 21  KFVALPGEAGELGILPGHTPLITRIRPGAVRIEAESGDEEFVFVAGGILEVQ-PGAVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASS--ETAKAEAQIAVEVAE 144
           A+ A     LD++ A +   +A+  L +A S  + AKA++++A  +A+
Sbjct: 80  ADTAIRGKDLDSAKAEEAKKRAEETLQNAKSDLDLAKAQSELATAMAQ 127


>gi|395234192|ref|ZP_10412421.1| ATP synthase epsilon subunit [Enterobacter sp. Ag1]
 gi|394731332|gb|EJF31129.1| ATP synthase epsilon subunit [Enterobacter sp. Ag1]
          Length = 139

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 21  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGVLEVQ-PGNVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  + S         AS+E AKA A++ V
Sbjct: 80  LADTAIRGQDLDEARALEAKRKAEEHMHSSHGDVDYAQASAELAKAIAKLRV 131


>gi|170694321|ref|ZP_02885475.1| ATP synthase F1, epsilon subunit [Burkholderia graminis C4D1M]
 gi|170140744|gb|EDT08918.1| ATP synthase F1, epsilon subunit [Burkholderia graminis C4D1M]
          Length = 141

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 3/108 (2%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  +G  GILP H P +  ++PG + +    G  + +FV+ G + +    +V ++
Sbjct: 21  KFVALPGEAGELGILPGHTPLITRIRPGAVRIEAENGEEEFVFVAGGILEIQ-PGAVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASS--ETAKAEAQIAVEVAE 144
           A+ A     LD + A D   +A+  L +  S  E A A+A++A   A+
Sbjct: 80  ADTAIRGKDLDEAKAEDARKRAEEALQNTGSNLEYATAQAELAYATAQ 127


>gi|119367772|sp|Q13DP1.2|ATPE_RHOPS RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
          Length = 135

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 3/87 (3%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F L S  +V ++ + V QVD+P   G FG+L  H P +A+++PG++TV    G  QKI V
Sbjct: 6   FDLVSPEQVAFSGE-VDQVDIPGAEGDFGVLAGHAPVVAVIRPGILTV-TAGGAQQKIVV 63

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLD 109
             G   V+ +  + ++A+ A  V  LD
Sbjct: 64  LGGIAEVS-EKGLTVLADVATAVADLD 89


>gi|187925862|ref|YP_001897504.1| F0F1 ATP synthase subunit epsilon [Burkholderia phytofirmans PsJN]
 gi|226740232|sp|B2T7J9.1|ATPE_BURPP RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|187717056|gb|ACD18280.1| ATP synthase F1, epsilon subunit [Burkholderia phytofirmans PsJN]
          Length = 141

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 3/108 (2%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  +G  GILP H P +  ++PG + +    G  + +FV+ G + +    +V ++
Sbjct: 21  KFVALPGEAGELGILPGHTPLITRIRPGAVRIEAENGEEEFVFVAGGILEIQ-PGAVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASS--ETAKAEAQIAVEVAE 144
           A+ A     LD + A D   +A+  L +  S  E A A+A++A   A+
Sbjct: 80  ADTAIRGKDLDEAKAEDARKRAEEALQNTGSNLEYATAQAELAYATAQ 127


>gi|429463144|ref|YP_007184607.1| F-type H+-transporting ATPase subunit epsilon [Candidatus
           Kinetoplastibacterium crithidii (ex Angomonas deanei
           ATCC 30255)]
 gi|451811202|ref|YP_007447657.1| F-type H+-transporting ATPase subunit epsilon [Candidatus
           Kinetoplastibacterium crithidii TCC036E]
 gi|429338658|gb|AFZ83081.1| F-type H+-transporting ATPase subunit epsilon [Candidatus
           Kinetoplastibacterium crithidii (ex Angomonas deanei
           ATCC 30255)]
 gi|451776360|gb|AGF47359.1| F-type H+-transporting ATPase subunit epsilon [Candidatus
           Kinetoplastibacterium crithidii TCC036E]
          Length = 143

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 67/118 (56%), Gaps = 5/118 (4%)

Query: 41  VDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAE 100
           V +P+ SG+ GILP H P +++++PGVI V +  G    IFV+ G + V     V ++ +
Sbjct: 24  VLLPADSGSIGILPGHTPLISLVRPGVIKVVDEHGKDHNIFVAGGILEV-QPHEVTVLTD 82

Query: 101 EAHPVDSLDASAARDVLSKAQSELSSA--SSETAKAEAQIAVEVAE--ALKIFVSSGT 154
            A    +LD + A +   +A+  L +A   S+ A  EA++ V VA+  A +I+ S+ +
Sbjct: 83  TAIRASNLDEARATEARRRAEETLRNAKNKSDIAVVEAELNVLVAQTRAARIYGSNNS 140


>gi|392543464|ref|ZP_10290601.1| ATP synthase, F1 sector subunit epsilon [Pseudoalteromonas
           piscicida JCM 20779]
          Length = 138

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 2/109 (1%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V  + V    G  GI P H P L  LKPG++ + + +   + I+V+ GT+ V    +V +
Sbjct: 21  VTTIQVTGSEGELGIHPGHAPLLTGLKPGMVRLVKADSSEEVIYVAGGTLEVQ-PQTVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           +A+ A   + LD  AA +   +AQ++++S ++     + Q AV++ EAL
Sbjct: 80  LADVAIRAEELDEQAAEEAKREAQAQMASGTTGELDYQ-QAAVQLEEAL 127


>gi|421496326|ref|ZP_15943558.1| F0F1 ATP synthase subunit epsilon [Aeromonas media WS]
 gi|407184590|gb|EKE58415.1| F0F1 ATP synthase subunit epsilon [Aeromonas media WS]
          Length = 139

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 13/130 (10%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
            +D   A G K+F  +  V+   V    G  G+   H P L  +KPG++ + +  G  + 
Sbjct: 5   HLDVVSAEG-KLF--SGRVQSAQVTGSEGELGLRHGHAPLLTAIKPGLVRLIKQNGSEEV 61

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSE 130
           +++S G + V  + +V ++A+ A   D LD + A++   +A+  +SS         AS+E
Sbjct: 62  LYISGGMLEVQPE-AVTVLADTAIRADDLDEAKAQEAKRRAEERISSSHGDIDYAQASAE 120

Query: 131 TAKAEAQIAV 140
            AKA AQ+ V
Sbjct: 121 LAKAMAQLRV 130


>gi|423122854|ref|ZP_17110538.1| ATP synthase epsilon chain [Klebsiella oxytoca 10-5246]
 gi|376392135|gb|EHT04802.1| ATP synthase epsilon chain [Klebsiella oxytoca 10-5246]
          Length = 139

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    SV +
Sbjct: 21  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQ-PGSVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  ++S         AS+E AKA A++ V
Sbjct: 80  LADTAIRGQDLDEARALESKRKAEEHINSSHGDVDYAQASAELAKAIAKLRV 131


>gi|375110074|ref|ZP_09756310.1| F0F1 ATP synthase subunit epsilon [Alishewanella jeotgali KCTC
           22429]
 gi|397168867|ref|ZP_10492303.1| F0F1 ATP synthase subunit epsilon [Alishewanella aestuarii B11]
 gi|374569823|gb|EHR40970.1| F0F1 ATP synthase subunit epsilon [Alishewanella jeotgali KCTC
           22429]
 gi|396089454|gb|EJI87028.1| F0F1 ATP synthase subunit epsilon [Alishewanella aestuarii B11]
          Length = 138

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+ V V    G  G+LP H P L  LKPG++ + +  G    I+V+ G + V  D ++ +
Sbjct: 21  VESVQVTGSEGELGVLPFHAPLLTTLKPGMVRIVKQFGEEHLIYVAGGVLEVQPD-NITV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
           +A+ A   + LD  AA D   +A+  +  AS++
Sbjct: 80  LADVAVRGEDLDEQAALDAQKRAEEAMQHASAD 112


>gi|385207669|ref|ZP_10034537.1| ATP synthase, F1 epsilon subunit [Burkholderia sp. Ch1-1]
 gi|385180007|gb|EIF29283.1| ATP synthase, F1 epsilon subunit [Burkholderia sp. Ch1-1]
          Length = 141

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 3/108 (2%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  +G  GILP H P +  ++PG + +    G  + +FV+ G + +    +V ++
Sbjct: 21  KFVALPGEAGELGILPGHTPLITRIRPGAVRIEAENGEEEFVFVAGGILEIQ-PGAVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASS--ETAKAEAQIAVEVAE 144
           A+ A     LD + A D   +A+  L +  S  E A A+A++A   A+
Sbjct: 80  ADTAIRGKDLDEAKAEDARKRAEEALQNTGSNLEYATAQAELAYATAQ 127


>gi|11467385|ref|NP_043242.1| ATP synthase CF1 epsilon subunit [Cyanophora paradoxa]
 gi|1352037|sp|P48083.1|ATPE_CYAPA RecName: Full=ATP synthase epsilon chain, cyanelle; AltName:
           Full=ATP synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|1016186|gb|AAA81273.1| epsilon subunit of the F1 portion of ATP synthase [Cyanophora
           paradoxa]
          Length = 132

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 3/125 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           +D  + + NKV +  +N ++V +PS SG  GIL +H P    L  GV+ +    G +  I
Sbjct: 3   LDVRVIAPNKVIWA-KNAEEVILPSQSGMLGILTSHAPLYTALNTGVMKIRNETGWTS-I 60

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
            V  G + V + + V ++      VD +D SAA+  + KA    +SA +   K EA   +
Sbjct: 61  VVMGGFVEV-EKNEVLVLVNAGEYVDEIDLSAAKKDVEKALETFNSAEAPKEKEEAAEFL 119

Query: 141 EVAEA 145
           + A+A
Sbjct: 120 KYAQA 124


>gi|357386191|ref|YP_004900915.1| ATP synthase subunit epsilon [Pelagibacterium halotolerans B2]
 gi|351594828|gb|AEQ53165.1| ATP synthase epsilon chain [Pelagibacterium halotolerans B2]
          Length = 140

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%)

Query: 30  KVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITV 89
           +V   +   + V VP   G   ++ +H P +A+LKPG +TV +T G     FV  G   +
Sbjct: 13  EVLVLSAQARSVIVPGSEGYLTVMGDHAPLMAVLKPGFVTVTDTSGAVSSFFVGGGFADI 72

Query: 90  NDDSSVQIIAEEAHP 104
           + D+ V I+AEEA P
Sbjct: 73  S-DAGVTILAEEAKP 86


>gi|429094895|ref|ZP_19157407.1| ATP synthase epsilon chain [Cronobacter dublinensis 1210]
 gi|429098747|ref|ZP_19160853.1| ATP synthase epsilon chain [Cronobacter dublinensis 582]
 gi|426285087|emb|CCJ86966.1| ATP synthase epsilon chain [Cronobacter dublinensis 582]
 gi|426739991|emb|CCJ83520.1| ATP synthase epsilon chain [Cronobacter dublinensis 1210]
          Length = 137

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 19  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEYIYLSGGVMEVQ-PGNVTV 77

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  + S         AS+E AKA A++ V
Sbjct: 78  LADTAIRGQDLDEARALEAKRKAEDHIRSSHGDVDYAQASAELAKAIAKLRV 129


>gi|430762969|ref|YP_007218826.1| ATP synthase epsilon chain [Thioalkalivibrio nitratireducens DSM
           14787]
 gi|430012593|gb|AGA35345.1| ATP synthase epsilon chain [Thioalkalivibrio nitratireducens DSM
           14787]
          Length = 140

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 5/109 (4%)

Query: 44  PSFSGAFGILPNHVPTLAILKPGVITVYETE-GVSQKIFVSSGTITVNDDSSVQIIAEEA 102
           P+  G  G+ P H   LA LKPG + + ETE G  Q +FVS G I V     V ++A+ A
Sbjct: 27  PTELGEIGVYPRHTQLLARLKPGELRIRETEQGEPQHVFVSGGIIEVQ-PYVVTVLADTA 85

Query: 103 HPVDSLDASAARDVLSKAQSELSSASSE--TAKAEAQIAVEVAEALKIF 149
                LD + A +   +A+  L+ + +E   AKA+A++ VE A  L++ 
Sbjct: 86  IRAKDLDEAEALEAKRRAEDALAHSKAEFDYAKAQAEL-VEAAARLQMI 133


>gi|340789367|ref|YP_004754832.1| ATP synthase subunit epsilon [Collimonas fungivorans Ter331]
 gi|340554634|gb|AEK64009.1| ATP synthase epsilon chain [Collimonas fungivorans Ter331]
          Length = 138

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 3/105 (2%)

Query: 41  VDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAE 100
           V +P  +G+ GILP H P L  LKPG + +    G    I+V+ G   +    SV I+A+
Sbjct: 23  VTLPGIAGSLGILPGHTPLLTRLKPGAVHIKRVSGEDDYIYVAGGYAEIQ-PHSVTILAD 81

Query: 101 EAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEA 145
            A     LD + A     +A+  L + +S    A AQ   E+AEA
Sbjct: 82  TAIRGKDLDEAKATAARQQAEERLQNLASNIDYAMAQ--AELAEA 124


>gi|224087881|ref|XP_002195262.1| PREDICTED: ATP synthase subunit delta, mitochondrial [Taeniopygia
           guttata]
          Length = 75

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 54/72 (75%)

Query: 146 LKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 205
           L + VSSG+++V+ DS+VQ++AEEA  +D LD + A+  L KA SE+++AS E AKAEAQ
Sbjct: 2   LCLAVSSGSVSVHADSTVQVLAEEAVTMDMLDLATAKSNLEKAVSEMAAASDEAAKAEAQ 61

Query: 206 IAVEVAEALVAA 217
           I VE  EALV A
Sbjct: 62  IKVEANEALVKA 73



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/65 (56%), Positives = 50/65 (76%)

Query: 82  VSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVE 141
           VSSG+++V+ DS+VQ++AEEA  +D LD + A+  L KA SE+++AS E AKAEAQI VE
Sbjct: 6   VSSGSVSVHADSTVQVLAEEAVTMDMLDLATAKSNLEKAVSEMAAASDEAAKAEAQIKVE 65

Query: 142 VAEAL 146
             EAL
Sbjct: 66  ANEAL 70


>gi|152990963|ref|YP_001356685.1| F0F1 ATP synthase subunit epsilon [Nitratiruptor sp. SB155-2]
 gi|166222479|sp|A6Q4B9.1|ATPE_NITSB RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|151422824|dbj|BAF70328.1| F0F1-type ATP synthase, epsilon subunit [Nitratiruptor sp. SB155-2]
          Length = 129

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 2/112 (1%)

Query: 37  NVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQ 96
           +VK V  P   G FG+LP H   L++LKPGVI +   +G  + I ++ G + V+++ +  
Sbjct: 19  DVKSVTFPGEEGEFGVLPKHASLLSLLKPGVIEIELPDGKKESIVINWGHVNVSENQATA 78

Query: 97  IIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEALKI 148
           ++ E A P++    S     + +A+  + SAS   A A A +   + +A KI
Sbjct: 79  LV-EGAVPLEGTTESEIAKKIEEAKKLIESASENKA-ALATVEARIEKAAKI 128


>gi|414164327|ref|ZP_11420574.1| ATP synthase epsilon chain [Afipia felis ATCC 53690]
 gi|410882107|gb|EKS29947.1| ATP synthase epsilon chain [Afipia felis ATCC 53690]
          Length = 137

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 3/96 (3%)

Query: 17  YADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGV 76
            A+   F L S  K+ ++ + V+QVDVP   G FG+L  H P +A ++PG++ V    G 
Sbjct: 1   MANNFHFDLVSPEKIAFSGE-VEQVDVPGVEGDFGVLAGHSPLVASVRPGILVVT-VGGK 58

Query: 77  SQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASA 112
            +KI V  G   V+ D  + ++A+ A  +  LD +A
Sbjct: 59  QEKIIVLGGLAEVS-DKGLTVLADTATSLAELDRAA 93


>gi|419844534|ref|ZP_14367822.1| ATP synthase F1, epsilon subunit [Haemophilus parainfluenzae
           HK2019]
 gi|386417194|gb|EIJ31681.1| ATP synthase F1, epsilon subunit [Haemophilus parainfluenzae
           HK2019]
          Length = 142

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 1/87 (1%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           VKQ+      G  GILPNH P +  +KPG+I     +G  + I+VS G + V     V +
Sbjct: 20  VKQIQATGVEGELGILPNHTPLMTAIKPGIIKFTLEDGNEEVIYVSGGFLEVQ-PKVVTV 78

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSEL 124
           +A+ A     LDA   R+   KA+  +
Sbjct: 79  LADVAIRGSELDADRIREAKRKAEENI 105


>gi|16272425|ref|NP_438638.1| F0F1 ATP synthase subunit epsilon [Haemophilus influenzae Rd KW20]
 gi|68249080|ref|YP_248192.1| ATP synthase F0F1 subunit epsilon [Haemophilus influenzae 86-028NP]
 gi|145628858|ref|ZP_01784658.1| F0F1 ATP synthase subunit epsilon [Haemophilus influenzae 22.1-21]
 gi|145636254|ref|ZP_01791923.1| ATP synthase subunit epsilon [Haemophilus influenzae PittHH]
 gi|145638606|ref|ZP_01794215.1| ATP synthase subunit epsilon [Haemophilus influenzae PittII]
 gi|148825243|ref|YP_001289996.1| F0F1 ATP synthase subunit epsilon [Haemophilus influenzae PittEE]
 gi|148827674|ref|YP_001292427.1| F0F1 ATP synthase subunit epsilon [Haemophilus influenzae PittGG]
 gi|229844361|ref|ZP_04464501.1| F0F1 ATP synthase subunit epsilon [Haemophilus influenzae 6P18H1]
 gi|229846565|ref|ZP_04466673.1| F0F1 ATP synthase subunit epsilon [Haemophilus influenzae 7P49H1]
 gi|260580458|ref|ZP_05848286.1| ATP synthase F1, epsilon subunit [Haemophilus influenzae RdAW]
 gi|386265130|ref|YP_005828622.1| Membrane-bound ATP synthase, F1 sector, epsilon-subunit
           [Haemophilus influenzae R2846]
 gi|1168590|sp|P43718.1|ATPE_HAEIN RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|81336514|sp|Q4QN65.1|ATPE_HAEI8 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|166222462|sp|A5UA12.1|ATPE_HAEIE RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|166222463|sp|A5UGY8.1|ATPE_HAEIG RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|1573456|gb|AAC22136.1| ATP synthase F1, subunit epsilon (atpC) [Haemophilus influenzae Rd
           KW20]
 gi|68057279|gb|AAX87532.1| ATP synthase epsilon chain [Haemophilus influenzae 86-028NP]
 gi|144979328|gb|EDJ89014.1| F0F1 ATP synthase subunit epsilon [Haemophilus influenzae 22.1-21]
 gi|145270419|gb|EDK10353.1| ATP synthase subunit epsilon [Haemophilus influenzae PittHH]
 gi|145272201|gb|EDK12109.1| ATP synthase subunit epsilon [Haemophilus influenzae PittII]
 gi|148715403|gb|ABQ97613.1| ATP synthase subunit epsilon [Haemophilus influenzae PittEE]
 gi|148718916|gb|ABR00044.1| F0F1 ATP synthase subunit epsilon [Haemophilus influenzae PittGG]
 gi|229810658|gb|EEP46376.1| F0F1 ATP synthase subunit epsilon [Haemophilus influenzae 7P49H1]
 gi|229812610|gb|EEP48299.1| F0F1 ATP synthase subunit epsilon [Haemophilus influenzae 6P18H1]
 gi|260092800|gb|EEW76735.1| ATP synthase F1, epsilon subunit [Haemophilus influenzae RdAW]
 gi|309750107|gb|ADO80091.1| Membrane-bound ATP synthase, F1 sector, epsilon-subunit
           [Haemophilus influenzae R2866]
 gi|309972366|gb|ADO95567.1| Membrane-bound ATP synthase, F1 sector, epsilon-subunit
           [Haemophilus influenzae R2846]
          Length = 142

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 2/110 (1%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
            + T+ S  +  +  + VKQ+ V    G  GILP H P L  +KPG++     +G  + I
Sbjct: 4   FNLTIVSAEQKIFEGE-VKQIQVTGVEGELGILPGHTPLLTAIKPGIVKFTLKDGNEEVI 62

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
           +VS G + V  +  V ++A+ A     LDA    +   KA+  + S  S+
Sbjct: 63  YVSGGFLEVQPN-IVTVLADIAIRGSELDADRIHEAKRKAEENIVSRGSD 111


>gi|254250971|ref|ZP_04944289.1| ATP synthase subunit epsilon [Burkholderia dolosa AUO158]
 gi|124893580|gb|EAY67460.1| ATP synthase subunit epsilon [Burkholderia dolosa AUO158]
          Length = 141

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 60/108 (55%), Gaps = 3/108 (2%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  +G  GILP H P +  ++PG + +    G  + +FV+ G + V    +V ++
Sbjct: 21  KFVALPGEAGELGILPGHTPLITRIRPGAVRIEVEGGNDEFVFVAGGILEVQ-PGAVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASSET--AKAEAQIAVEVAE 144
           A+ A     LD++ A +   +A+  L +A S+   AKA++++A  +A+
Sbjct: 80  ADTAIRGKDLDSAKAEEARKRAEETLQNAKSDIDLAKAQSELATAMAQ 127


>gi|209515775|ref|ZP_03264638.1| ATP synthase F1, epsilon subunit [Burkholderia sp. H160]
 gi|295678132|ref|YP_003606656.1| ATP synthase F1 subunit epsilon [Burkholderia sp. CCGE1002]
 gi|209503802|gb|EEA03795.1| ATP synthase F1, epsilon subunit [Burkholderia sp. H160]
 gi|295437975|gb|ADG17145.1| ATP synthase F1, epsilon subunit [Burkholderia sp. CCGE1002]
          Length = 141

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 3/108 (2%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  +G  GILP H P +  ++PG + +    G  + +FV+ G + V    +V ++
Sbjct: 21  KFVALPGEAGELGILPGHTPLITRIRPGAVRIEVENGEEEFVFVAGGILEVQ-PGAVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASS--ETAKAEAQIAVEVAE 144
           A+ A     LD + A D   +A+  L +  S  E A A+A++A   A+
Sbjct: 80  ADTAIRGKDLDEAKAEDARKRAEEALQNTGSNLEYATAQAELAYATAQ 127


>gi|307942825|ref|ZP_07658170.1| ATP synthase F1, epsilon subunit [Roseibium sp. TrichSKD4]
 gi|307773621|gb|EFO32837.1| ATP synthase F1, epsilon subunit [Roseibium sp. TrichSKD4]
          Length = 135

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 6/134 (4%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           AD   F L S   +  + + V +V VP   G FG+L +H P ++ +KPG++ V +     
Sbjct: 2   ADTFQFELVSPEHLLLSEE-VLEVVVPGTDGEFGVLKHHSPFMSTIKPGILKVRKDGNAW 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
            + FV  G       + + ++AE A PV  + A      +  A+ +++ A  +  + +A 
Sbjct: 61  VEYFVRGGFADAG-PNGLTVLAERATPVSEISADDLNQQIKNAEEDVADAKDDETRQKAS 119

Query: 138 IAV----EVAEALK 147
           + +    +VAEA K
Sbjct: 120 MHLSQLKDVAEAFK 133


>gi|308175408|ref|YP_003922113.1| ATP synthase subunit epsilon, F1 subunit [Bacillus
           amyloliquefaciens DSM 7]
 gi|384161298|ref|YP_005543371.1| F0F1 ATP synthase subunit epsilon [Bacillus amyloliquefaciens
           TA208]
 gi|384166202|ref|YP_005547581.1| ATP synthase subunit epsilon, F1 subunit [Bacillus
           amyloliquefaciens LL3]
 gi|384170395|ref|YP_005551773.1| F0F1 ATP synthase subunit epsilon [Bacillus amyloliquefaciens XH7]
 gi|307608272|emb|CBI44643.1| ATP synthase (subunit epsilon, F1 subunit) [Bacillus
           amyloliquefaciens DSM 7]
 gi|328555386|gb|AEB25878.1| F0F1 ATP synthase subunit epsilon [Bacillus amyloliquefaciens
           TA208]
 gi|328913757|gb|AEB65353.1| ATP synthase (subunit epsilon, F1 subunit) [Bacillus
           amyloliquefaciens LL3]
 gi|341829674|gb|AEK90925.1| F0F1 ATP synthase subunit epsilon [Bacillus amyloliquefaciens XH7]
          Length = 132

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 2/107 (1%)

Query: 37  NVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQ 96
           +++ V V + SG  GILP H+PT+A LK G + + + +G +    VS G + V  D  V 
Sbjct: 19  DIEMVSVRAESGDLGILPGHIPTVAPLKIGAVRL-KKDGQTDLAAVSGGFLEVRPD-QVT 76

Query: 97  IIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
           I+A+ A   DS+D   A     +A+  L+  S +T    A++A++ A
Sbjct: 77  ILAQAAETADSIDKERALAAKKRAEDRLNKRSDDTDIRRAELALQRA 123


>gi|206558441|ref|YP_002229201.1| F0F1 ATP synthase subunit epsilon [Burkholderia cenocepacia J2315]
 gi|444357085|ref|ZP_21158667.1| ATP synthase F1, epsilon subunit [Burkholderia cenocepacia BC7]
 gi|444365684|ref|ZP_21165806.1| ATP synthase F1, epsilon subunit [Burkholderia cenocepacia
           K56-2Valvano]
 gi|226740229|sp|B4EEZ0.1|ATPE_BURCJ RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|198034478|emb|CAR50343.1| ATP synthase epsilon chain [Burkholderia cenocepacia J2315]
 gi|443605796|gb|ELT73620.1| ATP synthase F1, epsilon subunit [Burkholderia cenocepacia
           K56-2Valvano]
 gi|443606643|gb|ELT74408.1| ATP synthase F1, epsilon subunit [Burkholderia cenocepacia BC7]
          Length = 141

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 59/108 (54%), Gaps = 3/108 (2%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  +G  GILP H P +  ++PG + +    G  + +FV+ G + V    +V ++
Sbjct: 21  KFVALPGETGELGILPGHTPLITRIRPGAVRIEVEGGNDEFVFVAGGILEVQ-PGAVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASS--ETAKAEAQIAVEVAE 144
           A+ A     LDA+ A +   +A+  L +  S  + AKA++++A  +A+
Sbjct: 80  ADTAIRGKDLDAAKAEEARKRAEETLQNVKSDLDLAKAQSELATAMAQ 127


>gi|39933252|ref|NP_945528.1| ATP synthase F0F1 subunit epsilon [Rhodopseudomonas palustris
           CGA009]
 gi|192288603|ref|YP_001989208.1| F0F1 ATP synthase subunit epsilon [Rhodopseudomonas palustris
           TIE-1]
 gi|60389659|sp|Q6NDD3.1|ATPE_RHOPA RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|226740280|sp|B3Q744.1|ATPE_RHOPT RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|39652877|emb|CAE25619.1| putative H+-transporting ATP synthase epsilon chain
           [Rhodopseudomonas palustris CGA009]
 gi|192282352|gb|ACE98732.1| ATP synthase F1, epsilon subunit [Rhodopseudomonas palustris TIE-1]
          Length = 135

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 3/87 (3%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F L S   V ++  +V QVD+P   G FG+L  H P +A+++PG++TV  T G +++  V
Sbjct: 6   FDLVSPEMVAFSG-DVDQVDIPGAEGDFGVLAGHAPVVAVIRPGILTV--TAGANKQKIV 62

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLD 109
             G I    D  + ++A+ A P   +D
Sbjct: 63  VLGGIAEVSDKGLTVLADVATPAPDVD 89


>gi|322421874|ref|YP_004201097.1| ATP synthase F1, subunit epsilon [Geobacter sp. M18]
 gi|320128261|gb|ADW15821.1| ATP synthase F1, epsilon subunit [Geobacter sp. M18]
          Length = 138

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 2/83 (2%)

Query: 48  GAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDS 107
           G FG+LP H P L  LK G +  Y+ +GV   + ++ G   V +D  V ++ E A   D 
Sbjct: 31  GEFGVLPGHAPFLTSLKIGELA-YKKDGVLHHLALNWGYFEVEND-QVTVLVETAERADE 88

Query: 108 LDASAARDVLSKAQSELSSASSE 130
           +D   A+  + +A++EL S + E
Sbjct: 89  IDLERAKAAMGRAETELKSVTPE 111


>gi|417778470|ref|ZP_12426276.1| ATP synthase F1, epsilon subunit [Leptospira weilii str.
           2006001853]
 gi|410781541|gb|EKR66114.1| ATP synthase F1, epsilon subunit [Leptospira weilii str.
           2006001853]
          Length = 127

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 64/114 (56%), Gaps = 4/114 (3%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           A +++ ++ S  K+ Y  + V  + VP   G FGILPNH P +A+L  GV+ + + E + 
Sbjct: 3   AHKLNVSVISPEKILYKGE-VDSLVVPGNEGFFGILPNHAPLVAVLGIGVLEIRKGEKL- 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSET 131
           + + V  G I V ++ SV I+ +     D +D  A +  L++A+ +LS + S+ 
Sbjct: 61  KVLSVEGGFIEVKEN-SVSILTDHGALKDDIDLEAEKKALAEAE-KLSPSDSKN 112


>gi|118603004|ref|YP_904219.1| F0F1 ATP synthase subunit epsilon [Candidatus Ruthia magnifica str.
           Cm (Calyptogena magnifica)]
 gi|166222491|sp|A1AXU1.1|ATPE_RUTMC RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|118567943|gb|ABL02748.1| ATP synthase F1 subcomplex epsilon subunit [Candidatus Ruthia
           magnifica str. Cm (Calyptogena magnifica)]
          Length = 138

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 3/104 (2%)

Query: 25  LASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSS 84
           + S  +  Y+ + V  V  P+ +G  GI P H   L+ILKPG + V   +GV + I++S 
Sbjct: 8   VVSATESLYSGE-VSCVFAPASTGELGIYPKHTALLSILKPGEVRVETDKGV-ESIYISG 65

Query: 85  GTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS 128
           G I V  D  V I ++ A   D+LD S A +   +AQ  + +A+
Sbjct: 66  GIIEVQPD-VVTIFSDTAIRADNLDESKALEAKQRAQEAIENAT 108


>gi|145640452|ref|ZP_01796036.1| F0F1 ATP synthase subunit epsilon [Haemophilus influenzae R3021]
 gi|319775595|ref|YP_004138083.1| F1 sector of membrane-bound ATP synthase subunit epsilon
           [Haemophilus influenzae F3047]
 gi|329122359|ref|ZP_08250946.1| ATP synthase F1 sector epsilon subunit [Haemophilus aegyptius ATCC
           11116]
 gi|145275038|gb|EDK14900.1| F0F1 ATP synthase subunit epsilon [Haemophilus influenzae 22.4-21]
 gi|317450186|emb|CBY86402.1| F1 sector of membrane-bound ATP synthase, epsilon subunit
           [Haemophilus influenzae F3047]
 gi|327473641|gb|EGF19060.1| ATP synthase F1 sector epsilon subunit [Haemophilus aegyptius ATCC
           11116]
          Length = 142

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 2/110 (1%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
            + T+ S  +  +  + VKQ+ V    G  GILP H P L  +KPG++     +G  + I
Sbjct: 4   FNLTIVSAEQKIFEGE-VKQIQVTGVEGELGILPGHTPLLTAIKPGIVKFTLKDGNEEVI 62

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
           +VS G + V  +  V ++A+ A     LDA    +   KA+  + S  S+
Sbjct: 63  YVSGGFLEVQPN-IVTVLADIAIRGSELDADRIHEAKRKAEENIVSHGSD 111


>gi|86136464|ref|ZP_01055043.1| ATP synthase F1, epsilon subunit [Roseobacter sp. MED193]
 gi|85827338|gb|EAQ47534.1| ATP synthase F1, epsilon subunit [Roseobacter sp. MED193]
          Length = 137

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 3/111 (2%)

Query: 17  YADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGV 76
            AD M F L S  +   + Q V  V +P   G    +P H PT+  L+PGV+ V  ++G 
Sbjct: 1   MADTMQFDLVSPERSLASLQ-VNAVQIPGAEGDMTAMPMHAPTITTLRPGVLRVESSQGT 59

Query: 77  SQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSA 127
           S+  FV +G        ++ ++AE A P+D +  +   +++ +A++   +A
Sbjct: 60  SE--FVVTGGFAEISAEALSVLAERAIPMDEMTRAHLDELIEEARTMYKTA 108


>gi|334139372|ref|ZP_08512764.1| ATP synthase F1, epsilon subunit [Paenibacillus sp. HGF7]
 gi|333602185|gb|EGL13616.1| ATP synthase F1, epsilon subunit [Paenibacillus sp. HGF7]
          Length = 134

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 2/114 (1%)

Query: 30  KVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITV 89
           ++ YT QNV  V V    G  GILPNH+P +  LK    T+    G  + + ++ G + V
Sbjct: 13  RIVYT-QNVHMVSVDGIEGQLGILPNHIPFVTPLKIAPATIKFENGKQETVALNGGFMEV 71

Query: 90  NDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
             D  V I+AE A     +D   A+    +A+  L+    E     A++A++ A
Sbjct: 72  RKDKVV-ILAESAELPGDIDIERAKSAKERAEKRLTGKKDEADFQRAELALKRA 124


>gi|376297342|ref|YP_005168572.1| ATP synthase F1 subunit epsilon [Desulfovibrio desulfuricans ND132]
 gi|323459904|gb|EGB15769.1| ATP synthase F1, epsilon subunit [Desulfovibrio desulfuricans
           ND132]
          Length = 139

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 2/108 (1%)

Query: 36  QNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSV 95
           ++V+ V  P   G FG+LPNHVP L+ L  G +  Y+  G +  +FVS G   V+++  V
Sbjct: 18  EDVEYVGAPGIMGEFGVLPNHVPFLSALGIGNLH-YKQNGKAFYVFVSGGFAEVSNN-QV 75

Query: 96  QIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
            I+AE A     +D   A     +A+    +A  +   A  Q A++ A
Sbjct: 76  TILAEVAEKATEIDVERAMKAKERAEQRNQAAKEKVEAARNQAALKRA 123


>gi|378696679|ref|YP_005178637.1| F1 sector of membrane-bound ATP synthase, epsilon subunit
           [Haemophilus influenzae 10810]
 gi|301169198|emb|CBW28795.1| F1 sector of membrane-bound ATP synthase, epsilon subunit
           [Haemophilus influenzae 10810]
          Length = 142

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 2/110 (1%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
            + T+ S  +  +  + VKQ+ V    G  GILP H P L  +KPG++     +G  + I
Sbjct: 4   FNLTIVSAEQKIFEGE-VKQIQVTGVEGELGILPGHTPLLTAIKPGIVKFTLKDGNEEVI 62

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
           +VS G + V  +  V ++A+ A     LDA    +   KA+  + S  S+
Sbjct: 63  YVSGGFLEVQPN-IVTVLADIAIRGSELDADRIHEAKRKAEENIVSHGSD 111


>gi|325576870|ref|ZP_08147485.1| ATP synthase F1 sector epsilon subunit [Haemophilus parainfluenzae
           ATCC 33392]
 gi|325161076|gb|EGC73194.1| ATP synthase F1 sector epsilon subunit [Haemophilus parainfluenzae
           ATCC 33392]
          Length = 142

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           VKQ+      G  GILPNH P +  +KPG++ +   +G  + I+VS G + V     V +
Sbjct: 20  VKQIQATGVEGELGILPNHTPLMTAIKPGIVKLTLEDGNEEVIYVSGGFLEVQ-PKVVTV 78

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSEL 124
           +A+ A     LDA   R+   KA+  +
Sbjct: 79  LADVAIRGSELDADRIREAKRKAEENI 105


>gi|302832159|ref|XP_002947644.1| hypothetical protein VOLCADRAFT_109632 [Volvox carteri f.
           nagariensis]
 gi|300266992|gb|EFJ51177.1| hypothetical protein VOLCADRAFT_109632 [Volvox carteri f.
           nagariensis]
          Length = 202

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 9/122 (7%)

Query: 32  FYTNQNV-------KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSS 84
           FYT  +V         V +P   G FGI  NHVP +A L+PG++ +  +   ++K F+S 
Sbjct: 75  FYTPHSVLSDGAKKDGVTLPGIDGYFGIKANHVPIIAQLRPGIVEL-SSGPDTEKFFISG 133

Query: 85  GTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAE 144
           G   V+ +    I A EA  +D  D +  +  L+ A S       E  +A  + A+E+  
Sbjct: 134 GFAFVHPNGVADICALEAGTLDQFDPAQVKSALAAATSA-QGQGDEYDQAANRAALELYG 192

Query: 145 AL 146
           AL
Sbjct: 193 AL 194


>gi|399890308|ref|ZP_10776185.1| F0F1 ATP synthase subunit epsilon [Clostridium arbusti SL206]
          Length = 134

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 2/124 (1%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           ++  ++ +  + FY   ++ +V+  + +G  GILP H   + +LKP V      +G  + 
Sbjct: 4   KIKLSILTPTEKFYAG-DISEVNTSTMTGDIGILPEHSSFIGLLKPTVTKFKIEDGSEKS 62

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 139
           +F S+G + V  +  +QII ++A   + +D   A     +A+  L     +T    A+IA
Sbjct: 63  LFTSTGIVKVTKE-EIQIIVDDAEWPEEIDVDRAAKAKERAEERLHKHDPKTDSKRAEIA 121

Query: 140 VEVA 143
           ++ A
Sbjct: 122 LQRA 125


>gi|187930576|ref|YP_001901063.1| F0F1 ATP synthase subunit epsilon [Ralstonia pickettii 12J]
 gi|187727466|gb|ACD28631.1| cyclic nucleotide-binding protein [Ralstonia pickettii 12J]
          Length = 138

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 1/101 (0%)

Query: 37  NVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQ 96
           N K V +P  +G  GILP H P +  +KPG + + + +G  + +FV+ G + V     V 
Sbjct: 19  NAKFVALPGEAGELGILPGHTPLITRIKPGAVRIEKEDGGEEFVFVAGGILEVQ-PKRVT 77

Query: 97  IIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           ++A+ A     LD + A +    A+  L +  S+   A AQ
Sbjct: 78  VLADTAIRGHDLDEAKANEAKRAAEEALQNQGSDLDLARAQ 118


>gi|28202178|ref|NP_777419.1| ATP synthase CF1 epsilon subunit [Anthoceros formosae]
 gi|29337037|sp|Q31793.2|ATPE_ANTFO RecName: Full=ATP synthase epsilon chain, chloroplastic; AltName:
           Full=ATP synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|27807880|dbj|BAC55355.1| ATPase epsilon subunit (chloroplast) [Anthoceros formosae]
 gi|27808007|dbj|BAC55450.1| ATPase epsilon subunit (chloroplast) [Anthoceros formosae]
          Length = 138

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 63/125 (50%), Gaps = 3/125 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           ++  + + N++ + N  V+++ + + SG  G+LPNH P L  L  G+I +    G    +
Sbjct: 3   LNLRVMAPNRIVW-NSEVEEIVLSTNSGQIGVLPNHAPLLTALDIGIIKI-RLNGEWSTM 60

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
            +  G   + D++ + I+  EA     ++   AR+    AQ +L+ A     K EA +A 
Sbjct: 61  ALMGGFAMI-DNNGMTILVNEAEKATEINPQEARENYKMAQKDLAKAEGGKQKIEANLAF 119

Query: 141 EVAEA 145
           + A+A
Sbjct: 120 KRAKA 124


>gi|340001332|ref|YP_004732216.1| ATP synthase subunit epsilon [Salmonella bongori NCTC 12419]
 gi|339514694|emb|CCC32464.1| ATP synthase epsilon subunit [Salmonella bongori NCTC 12419]
          Length = 139

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V   S+  +
Sbjct: 21  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQPGSTT-V 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  + S         AS+E AKA A++ V
Sbjct: 80  LADTAIRGQDLDEARALEAKRKAEEHIKSSHGDVDYAQASAELAKAIAKLRV 131


>gi|375258140|ref|YP_005017310.1| F0F1 ATP synthase subunit epsilon [Klebsiella oxytoca KCTC 1686]
 gi|421727907|ref|ZP_16167065.1| F0F1 ATP synthase subunit epsilon [Klebsiella oxytoca M5al]
 gi|423105621|ref|ZP_17093323.1| ATP synthase epsilon chain [Klebsiella oxytoca 10-5242]
 gi|423111093|ref|ZP_17098788.1| ATP synthase epsilon chain [Klebsiella oxytoca 10-5243]
 gi|423117106|ref|ZP_17104797.1| ATP synthase epsilon chain [Klebsiella oxytoca 10-5245]
 gi|423126543|ref|ZP_17114222.1| ATP synthase epsilon chain [Klebsiella oxytoca 10-5250]
 gi|365907618|gb|AEX03071.1| F0F1 ATP synthase subunit epsilon [Klebsiella oxytoca KCTC 1686]
 gi|376376975|gb|EHS89750.1| ATP synthase epsilon chain [Klebsiella oxytoca 10-5245]
 gi|376377573|gb|EHS90342.1| ATP synthase epsilon chain [Klebsiella oxytoca 10-5243]
 gi|376380499|gb|EHS93245.1| ATP synthase epsilon chain [Klebsiella oxytoca 10-5242]
 gi|376397177|gb|EHT09812.1| ATP synthase epsilon chain [Klebsiella oxytoca 10-5250]
 gi|410371390|gb|EKP26113.1| F0F1 ATP synthase subunit epsilon [Klebsiella oxytoca M5al]
          Length = 139

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V   S+  +
Sbjct: 21  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQPGSTT-V 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  + S         AS+E AKA A++ V
Sbjct: 80  LADTAIRGQDLDEARALEAKRKAEEHIKSSHGDVDYAQASAELAKAIAKLRV 131


>gi|146313763|ref|YP_001178837.1| F0F1 ATP synthase subunit epsilon [Enterobacter sp. 638]
 gi|237729042|ref|ZP_04559523.1| predicted protein [Citrobacter sp. 30_2]
 gi|291086474|ref|ZP_06355896.2| hypothetical protein CIT292_10580 [Citrobacter youngae ATCC 29220]
 gi|365102331|ref|ZP_09332632.1| ATP synthase epsilon chain [Citrobacter freundii 4_7_47CFAA]
 gi|395230759|ref|ZP_10409059.1| ATP synthase F0F1 subunit epsilon [Citrobacter sp. A1]
 gi|421846881|ref|ZP_16280025.1| F0F1 ATP synthase subunit epsilon [Citrobacter freundii ATCC 8090 =
           MTCC 1658]
 gi|424729071|ref|ZP_18157674.1| f0f1 atp synthase subunit epsilon [Citrobacter sp. L17]
 gi|166990383|sp|A4WGF6.1|ATPE_ENT38 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|145320639|gb|ABP62786.1| ATP synthase F1 subcomplex epsilon subunit [Enterobacter sp. 638]
 gi|226909664|gb|EEH95582.1| predicted protein [Citrobacter sp. 30_2]
 gi|291068348|gb|EFE06457.1| ATP synthase F1, epsilon subunit [Citrobacter youngae ATCC 29220]
 gi|363646059|gb|EHL85307.1| ATP synthase epsilon chain [Citrobacter freundii 4_7_47CFAA]
 gi|394715520|gb|EJF21334.1| ATP synthase F0F1 subunit epsilon [Citrobacter sp. A1]
 gi|411771756|gb|EKS55416.1| F0F1 ATP synthase subunit epsilon [Citrobacter freundii ATCC 8090 =
           MTCC 1658]
 gi|422896179|gb|EKU35962.1| f0f1 atp synthase subunit epsilon [Citrobacter sp. L17]
 gi|455645327|gb|EMF24387.1| F0F1 ATP synthase subunit epsilon [Citrobacter freundii GTC 09479]
          Length = 139

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    SV +
Sbjct: 21  VEKIQVTGSEGELGIFPGHAPLLTAIKPGMIRIVKQFGHEEFIYLSGGILEVQ-PGSVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  + S         AS+E AKA A++ V
Sbjct: 80  LADTAIRGQDLDEARALEAKRKAEEHIKSSHGDVDYAQASAELAKAIAKLRV 131


>gi|437270694|ref|ZP_20723364.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. SL909]
 gi|435170831|gb|ELN56558.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Enteritidis str. SL909]
          Length = 139

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 21  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQ-PGNVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  + S         AS+E AKA A++ V
Sbjct: 80  LADTAIRGQDLDEARALEAKRKAEEHIKSSHGDVDYAQASAELAKAIAKLRV 131


>gi|161505611|ref|YP_001572724.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:- str. RSK2980]
 gi|423142352|ref|ZP_17129990.1| ATP synthase F1, epsilon subunit [Salmonella enterica subsp.
           houtenae str. ATCC BAA-1581]
 gi|189081375|sp|A9MJS1.1|ATPE_SALAR RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|160866958|gb|ABX23581.1| hypothetical protein SARI_03787 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-]
 gi|379050281|gb|EHY68174.1| ATP synthase F1, epsilon subunit [Salmonella enterica subsp.
           houtenae str. ATCC BAA-1581]
          Length = 139

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 21  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQ-PGTVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  + S         AS+E AKA A++ V
Sbjct: 80  LADTAIRGQDLDEARALEAKRKAEEHIKSSHGDVDYAQASAELAKAIAKLRV 131


>gi|359686244|ref|ZP_09256245.1| F0F1 ATP synthase subunit epsilon [Leptospira santarosai str.
           2000030832]
 gi|418744379|ref|ZP_13300735.1| ATP synthase F1, epsilon subunit [Leptospira santarosai str.
           CBC379]
 gi|418752013|ref|ZP_13308285.1| ATP synthase F1, epsilon subunit [Leptospira santarosai str.
           MOR084]
 gi|421111037|ref|ZP_15571518.1| ATP synthase F1, epsilon subunit [Leptospira santarosai str. JET]
 gi|422005746|ref|ZP_16352915.1| F0F1 ATP synthase subunit epsilon [Leptospira santarosai serovar
           Shermani str. LT 821]
 gi|409967742|gb|EKO35567.1| ATP synthase F1, epsilon subunit [Leptospira santarosai str.
           MOR084]
 gi|410794830|gb|EKR92730.1| ATP synthase F1, epsilon subunit [Leptospira santarosai str.
           CBC379]
 gi|410803470|gb|EKS09607.1| ATP synthase F1, epsilon subunit [Leptospira santarosai str. JET]
 gi|417255586|gb|EKT85054.1| F0F1 ATP synthase subunit epsilon [Leptospira santarosai serovar
           Shermani str. LT 821]
 gi|456874122|gb|EMF89442.1| ATP synthase F1, epsilon subunit [Leptospira santarosai str. ST188]
          Length = 127

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 64/114 (56%), Gaps = 4/114 (3%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           A+++  ++ S  K+ Y  + V  + VP   G FGILPNH P +A+L  G++ + + E + 
Sbjct: 3   ANKLKVSVISPEKILYKGE-VDSLVVPGSEGFFGILPNHAPLVAVLGIGILEIRKGEKL- 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSET 131
           + + +  G I V ++ S+ I+ +     + +D  A R VL +A+ +LS + S+ 
Sbjct: 61  KVLSIEGGFIEVKEN-SISILTDHGALKEDIDIEAERKVLVEAE-KLSPSDSKN 112


>gi|333895841|ref|YP_004469716.1| F0F1 ATP synthase subunit epsilon [Alteromonas sp. SN2]
 gi|332995859|gb|AEF05914.1| F0F1 ATP synthase subunit epsilon [Alteromonas sp. SN2]
          Length = 138

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 61/109 (55%), Gaps = 3/109 (2%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+ + V    G  GI P H P ++ +KPG++ + +  G  + I+V+ G + V    +V +
Sbjct: 22  VETIQVTGSEGELGIHPGHAPLISAIKPGMVRLVKQFGEEEVIYVAGGVLEVQ-PGNVTV 80

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           +A+ A  V+ LD  AA +   +AQ  +++  ++   AEA  A E++EA+
Sbjct: 81  LADTAVRVEDLDEQAAEEAKRRAQEHIANPGADFDYAEA--AQELSEAI 127


>gi|157783457|gb|ABV72536.1| ATP synthase CF1 epsilon subunit [Heterocapsa triquetra]
          Length = 130

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 2/110 (1%)

Query: 36  QNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSV 95
           + V +V +PS SG  G+L NH P +  L  GV+  Y+ +G   K  V+ G     D + +
Sbjct: 13  ETVSEVVLPSASGQLGVLANHAPMITALDIGVLR-YK-QGGEWKPLVTYGGFAQVDSNML 70

Query: 96  QIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEA 145
            I+  +   V+ +D  AA+  L  A ++L SA S+  K +A  AV+ A A
Sbjct: 71  SILVNDFDTVEDIDGEAAKKDLEAATAKLESAGSKKEKLDATAAVKKASA 120


>gi|374365868|ref|ZP_09623954.1| F0F1 ATP synthase subunit epsilon [Cupriavidus basilensis OR16]
 gi|373102522|gb|EHP43557.1| F0F1 ATP synthase subunit epsilon [Cupriavidus basilensis OR16]
          Length = 138

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 59/108 (54%), Gaps = 3/108 (2%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  SG  GILP H P +  ++PG + + + +G  + +FV+ G + V     V ++
Sbjct: 21  KFVALPGESGELGILPGHTPLITRIQPGAVRIEKADGSEEFVFVAGGILEVQ-PKHVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASS--ETAKAEAQIAVEVAE 144
           A+ A     LD + A++    A+  + + SS  + A+A+ ++AV  A+
Sbjct: 80  ADTAIRGGDLDEAKAQEAKRAAEELMQNQSSDLDLARAQGELAVATAQ 127


>gi|443329643|ref|YP_007374721.1| ATP synthase epsilon chain (chloroplast) [Equisetum hyemale]
 gi|441017834|gb|AGC26634.1| ATP synthase epsilon chain (chloroplast) [Equisetum hyemale]
          Length = 131

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 3/126 (2%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           +++  + + N++ + N  V+++ + + SG  GILPNH P L  L  GV  +      S  
Sbjct: 2   KLNLRVMAPNRIVW-NSEVEEIILSTNSGKIGILPNHAPLLTALDIGVTQIRLNGQWSNM 60

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 139
             +  G   + D + V I+  EA     +D   A+  L +A+ +L  A S   + EA +A
Sbjct: 61  ALM--GGFGMIDRNEVIILVNEAEKGSDIDIEEAKRKLLQAKYDLEKAESRKNRIEATLA 118

Query: 140 VEVAEA 145
           ++ A+A
Sbjct: 119 LKRAKA 124


>gi|381160562|ref|ZP_09869794.1| ATP synthase, F1 epsilon subunit [Thiorhodovibrio sp. 970]
 gi|380878626|gb|EIC20718.1| ATP synthase, F1 epsilon subunit [Thiorhodovibrio sp. 970]
          Length = 141

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 3/103 (2%)

Query: 44  PSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAH 103
           P   G  GI P H P +  LKPG + V + +G  +  +VS G + V  D  V ++A+ A 
Sbjct: 27  PGEMGELGIAPRHTPLITRLKPGDVRVEDDKGDMEHFYVSGGMLEVQPD-VVTVLADTAI 85

Query: 104 PVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
              ++D + A +   +A+  L+  ++E   A+AQ   E+AEA+
Sbjct: 86  RAQNIDEAKALEAKRRAEDALAGKAAEFEYAKAQ--AELAEAI 126


>gi|397660772|ref|YP_006501474.1| ATP synthase subunit epsilon [Klebsiella oxytoca E718]
 gi|402842635|ref|ZP_10891046.1| ATP synthase F1, epsilon subunit [Klebsiella sp. OBRC7]
 gi|394348753|gb|AFN34874.1| ATP synthase epsilon chain [Klebsiella oxytoca E718]
 gi|402278989|gb|EJU28033.1| ATP synthase F1, epsilon subunit [Klebsiella sp. OBRC7]
          Length = 137

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V   S+  +
Sbjct: 19  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQPGSTT-V 77

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  + S         AS+E AKA A++ V
Sbjct: 78  LADTAIRGQDLDEARALEAKRKAEEHIKSSHGDVDYAQASAELAKAIAKLRV 129


>gi|383768677|ref|YP_005447740.1| ATP synthase subunit epsilon [Bradyrhizobium sp. S23321]
 gi|381356798|dbj|BAL73628.1| ATP synthase epsilon chain [Bradyrhizobium sp. S23321]
          Length = 135

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 3/87 (3%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F L S  K+ ++ + V QVD+P   G FG+L  H P +A ++PG++TV  T G  +KI V
Sbjct: 6   FDLVSPEKLAFSGE-VDQVDIPGVEGDFGVLAGHAPVVAAIRPGILTVT-TGGKHEKIIV 63

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLD 109
             G   V+ +  + ++A+ A  +  LD
Sbjct: 64  LGGIAEVS-EKGLTVLADVATSLAELD 89


>gi|444921829|ref|ZP_21241659.1| ATP synthase epsilon chain [Wohlfahrtiimonas chitiniclastica SH04]
 gi|444507102|gb|ELV07284.1| ATP synthase epsilon chain [Wohlfahrtiimonas chitiniclastica SH04]
          Length = 140

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 9/113 (7%)

Query: 25  LASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSS 84
           L SG+  F+           S SG  G+ P H+P L  L PG + +   EG     ++S 
Sbjct: 15  LFSGDVTFFAGT--------SISGELGVFPGHLPLLTQLVPGQVRLKTAEGNEDVFWISG 66

Query: 85  GTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           G + +  +  + ++AE A   D LD + A+    + QS L+   S+   A+AQ
Sbjct: 67  GILEIQPNQII-VLAESAERADDLDEAEAKAAKERVQSMLNKHESDFNFAKAQ 118


>gi|421672971|ref|ZP_16112922.1| ATP synthase F1, epsilon subunit [Acinetobacter baumannii OIFC065]
 gi|421690140|ref|ZP_16129812.1| ATP synthase F1, epsilon subunit [Acinetobacter baumannii IS-116]
 gi|404565103|gb|EKA70277.1| ATP synthase F1, epsilon subunit [Acinetobacter baumannii IS-116]
 gi|410387896|gb|EKP40337.1| ATP synthase F1, epsilon subunit [Acinetobacter baumannii OIFC065]
          Length = 139

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 8/108 (7%)

Query: 47  SGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVD 106
            G  GILP H P + +L+PG I V    G  + ++VS G + V     V ++A+ A   D
Sbjct: 29  GGELGILPGHAPLVTLLQPGPIRVLLENGTEEIVYVSGGVLEVQ-PHVVTVLADTAIRAD 87

Query: 107 SLDASA-------ARDVLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
           +LD +A       A  +L+  +S+L SA+   A AE    +E    +K
Sbjct: 88  NLDEAAILEARKNAEQLLANQKSDLDSAAGLAALAETAAQLETIRKIK 135


>gi|293393690|ref|ZP_06637999.1| ATP synthase F1 sector epsilon subunit [Serratia odorifera DSM
           4582]
 gi|440233136|ref|YP_007346929.1| ATP synthase, F1 epsilon subunit [Serratia marcescens FGI94]
 gi|448239783|ref|YP_007403836.1| F0F1 ATP synthase subunit epsilon [Serratia marcescens WW4]
 gi|291423812|gb|EFE97032.1| ATP synthase F1 sector epsilon subunit [Serratia odorifera DSM
           4582]
 gi|440054841|gb|AGB84744.1| ATP synthase, F1 epsilon subunit [Serratia marcescens FGI94]
 gi|445210147|gb|AGE15817.1| F0F1 ATP synthase subunit epsilon [Serratia marcescens WW4]
 gi|453064423|gb|EMF05388.1| F0F1 ATP synthase subunit epsilon [Serratia marcescens VGH107]
          Length = 139

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG++ + +  G  + I++S G + V   S V +
Sbjct: 21  VQKIQVTGSEGELGIFPGHAPLLTAIKPGMVRIVKQHGEEEFIYLSGGILEVQ-PSVVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  + S         AS+E AKA A++ V
Sbjct: 80  LADTAIRGTDLDEARALEAKRKAEEHIRSSHGDVDYAQASAELAKAIAKLRV 131


>gi|163782705|ref|ZP_02177701.1| ATP synthase F1 epsilon subunit [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881826|gb|EDP75334.1| ATP synthase F1 epsilon subunit [Hydrogenivirga sp. 128-5-R1-1]
          Length = 131

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 14/121 (11%)

Query: 36  QNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITV--YETEGVSQKIFVSSGTITVNDDS 93
           + V  V++P+  G  G+L  H+  + +LKPG++     E EG++    V+ G + V  + 
Sbjct: 16  REVNSVNIPTAEGEIGVLQEHMYLMTLLKPGLVYFDGNEKEGMA----VTYGVVDVTPE- 70

Query: 94  SVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASS-------ETAKAEAQIAVEVAEAL 146
            V I+AEEA+ V  +D   A+    +A  +L++A +       E  K +AQ  +EV E +
Sbjct: 71  KVLILAEEAYEVGDIDVGKAKQEFEEAVKKLATAQTMEDIKEWEKIKEKAQALLEVVERV 130

Query: 147 K 147
           +
Sbjct: 131 R 131


>gi|242280911|ref|YP_002993040.1| F0F1 ATP synthase subunit epsilon [Desulfovibrio salexigens DSM
           2638]
 gi|259585480|sp|C6BSP5.1|ATPE_DESAD RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|242123805|gb|ACS81501.1| ATP synthase F1, epsilon subunit [Desulfovibrio salexigens DSM
           2638]
          Length = 142

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 4/93 (4%)

Query: 36  QNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEG-VSQKIFVSSGTITVNDDSS 94
           Q V  V  P   G FGI+ NH+P L+ L  GV  +Y  EG  +  IFVS G   V ++  
Sbjct: 19  QEVDYVGAPGIEGEFGIMANHIPFLSAL--GVGNLYFKEGNRTHYIFVSGGFAEVGNN-K 75

Query: 95  VQIIAEEAHPVDSLDASAARDVLSKAQSELSSA 127
           V I+AE A     +D + A+    KA++ L+ A
Sbjct: 76  VTILAEVAEKAVEIDIARAQKAQEKAKARLAKA 108


>gi|427663384|ref|ZP_18958652.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm11]
 gi|414047171|gb|EKT29466.1| F0F1 ATP synthase subunit epsilon [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm11]
          Length = 139

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    SV +
Sbjct: 21  VEKIQVTGSEGELGISPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQ-PGSVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  + S         AS+E AKA A++ V
Sbjct: 80  LADTAIRGQDLDEARALEAKRKAEEHIKSSHGDVDYAQASAELAKAIAKLRV 131


>gi|170737769|ref|YP_001779029.1| ATP synthase F1 subunit epsilon [Burkholderia cenocepacia MC0-3]
 gi|169819957|gb|ACA94539.1| ATP synthase F1, epsilon subunit [Burkholderia cenocepacia MC0-3]
          Length = 152

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 3/115 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETE-GVSQK 79
           M   + S   V Y   +   V VP  SG  GI P+H P L  ++PGV+T+ +   G  ++
Sbjct: 5   MKLDIVSVEAVLYAG-DAHFVVVPGESGELGIYPHHAPLLTRIRPGVVTLVDAPTGEHRR 63

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKA 134
           + V+ G + V+ D  V +IA+ A     LD   AR+    A       + E  +A
Sbjct: 64  LLVAGGVLEVSRD-GVTLIADHALRTPELDELRAREARHAADDWRQRYAHENRRA 117


>gi|410464024|ref|ZP_11317496.1| ATP synthase, F1 epsilon subunit [Desulfovibrio magneticus str.
           Maddingley MBC34]
 gi|409982856|gb|EKO39273.1| ATP synthase, F1 epsilon subunit [Desulfovibrio magneticus str.
           Maddingley MBC34]
          Length = 134

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 2/108 (1%)

Query: 36  QNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSV 95
           Q+V  V  P   G FG++ NH+P L+ L  G + +Y+  G +  +FV+ G   V+ +  V
Sbjct: 18  QDVDYVGAPGLLGEFGVMANHIPFLSALGIGSL-MYKVGGKANYVFVAGGFAEVSGN-KV 75

Query: 96  QIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
            I+AE A   + +D   AR    +A+  +     +   A AQ A++ A
Sbjct: 76  TILAEVAERPEDIDIDRARRAQERAKQRMDREKDKVDFARAQSAMQRA 123


>gi|239905120|ref|YP_002951859.1| F0F1 ATP synthase subunit epsilon [Desulfovibrio magneticus RS-1]
 gi|239794984|dbj|BAH73973.1| ATP synthase epsilon chain [Desulfovibrio magneticus RS-1]
          Length = 134

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 2/108 (1%)

Query: 36  QNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSV 95
           Q+V  V  P   G FG++ NH+P L+ L  G + +Y+  G +  +FV+ G   V+ +  V
Sbjct: 18  QDVDYVGAPGLLGEFGVMANHIPFLSALGIGSL-MYKVGGKANYVFVAGGFAEVSGN-KV 75

Query: 96  QIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
            I+AE A   + +D   AR    +A+  +     +   A AQ A++ A
Sbjct: 76  TILAEVAERPEDIDIERARRAQDRAKQRMDREKDKVDFARAQSAMQRA 123


>gi|156088329|ref|XP_001611571.1| ATP synthase, Delta/Epsilon chain, beta-sandwich domain containing
           protein [Babesia bovis]
 gi|154798825|gb|EDO08003.1| ATP synthase, Delta/Epsilon chain, beta-sandwich domain containing
           protein [Babesia bovis]
          Length = 154

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 7/143 (4%)

Query: 1   MAARLVTSATRLARRGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTL 60
           + ++++  AT     G   ++ F+L + +     N   KQ  VP   G F +   H   L
Sbjct: 4   LFSKILRHATATTGHG---KLLFSLLTPHTTLVNNIVAKQATVPGSEGYFTVTKGHAAML 60

Query: 61  AILKPGVITVY-ETEGVSQKIFVSSGTIT---VNDDSSVQIIAEEAHPVDSLDASAARDV 116
            +LKPGV++V  E  G   K F+SSG      V+ +S  ++   EA P+D LD      V
Sbjct: 61  TVLKPGVVSVVAEETGEVSKYFLSSGFFKIAHVDGNSVAEVSGVEAVPLDHLDKERTTQV 120

Query: 117 LSKAQSELSSASSETAKAEAQIA 139
           L +  +E   ++    KA+  + 
Sbjct: 121 LQELLAEGHGSNDPWIKAKTMLG 143


>gi|423349471|ref|ZP_17327127.1| hypothetical protein HMPREF9156_00665 [Scardovia wiggsiae F0424]
 gi|393703019|gb|EJD65221.1| hypothetical protein HMPREF9156_00665 [Scardovia wiggsiae F0424]
          Length = 96

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 34/52 (65%)

Query: 41 VDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDD 92
          V +P+ SG  GILPNH P L+IL  G ITV +T+G S +  V  G ++ +D+
Sbjct: 28 VSLPATSGGMGILPNHEPILSILSDGPITVTDTDGKSHRFTVRDGFVSFDDN 79


>gi|359800239|ref|ZP_09302787.1| F0F1 ATP synthase subunit epsilon [Achromobacter arsenitoxydans
           SY8]
 gi|359361798|gb|EHK63547.1| F0F1 ATP synthase subunit epsilon [Achromobacter arsenitoxydans
           SY8]
          Length = 141

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 65/118 (55%), Gaps = 7/118 (5%)

Query: 27  SGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGT 86
           S  +  +T +  K V +P  SG  GILP H P ++ ++PG + +   +   + IFV+ G 
Sbjct: 10  SAEEAIFTGE-AKFVVLPGESGELGILPGHTPLISRIRPGTVKIVRADQGEENIFVAGGI 68

Query: 87  ITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAE 144
           + V    SV ++A+ A  + + D   AR + ++ ++EL+ A+   AK +A IAV  AE
Sbjct: 69  LEVQ-PGSVTVLADTA--IRASDLDEARALEARQKAELALAN---AKDKADIAVVEAE 120


>gi|157144365|ref|YP_001451684.1| F0F1 ATP synthase subunit epsilon [Citrobacter koseri ATCC BAA-895]
 gi|166222448|sp|A8ACN5.1|ATPE_CITK8 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|157081570|gb|ABV11248.1| hypothetical protein CKO_00069 [Citrobacter koseri ATCC BAA-895]
          Length = 139

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    SV +
Sbjct: 21  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQFGHEEFIYLSGGILEVQ-PGSVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  + S         AS+E AKA A++ V
Sbjct: 80  LADTAIRGQDLDEARALEAKRKAEERIKSSHGDVDYAQASAELAKAIAKLRV 131


>gi|17548033|ref|NP_521435.1| ATP synthase F0F1 subunit epsilon [Ralstonia solanacearum GMI1000]
 gi|20137359|sp|Q8XU77.1|ATPE1_RALSO RecName: Full=ATP synthase epsilon chain 1; AltName: Full=ATP
           synthase F1 sector epsilon subunit 1; AltName:
           Full=F-ATPase epsilon subunit 1
 gi|17430339|emb|CAD17104.1| probable atp synthase epsilon chain 1 (atp synthase f1
           sectorepsilon subunit 1) protein [Ralstonia solanacearum
           GMI1000]
          Length = 137

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 4/110 (3%)

Query: 37  NVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQ 96
           + K V +P  +G  GILP H P +  +KPG + + ETE   + +FV+ G + V     V 
Sbjct: 19  DAKFVALPGEAGELGILPGHTPLITRIKPGAVRI-ETEAGEEFVFVAGGILEVQ-PKHVT 76

Query: 97  IIAEEAHPVDSLDASAARDVLSKAQSELSSASS--ETAKAEAQIAVEVAE 144
           ++A+ A     LD + A +    A+  L + SS  + A+A+ ++AV  A+
Sbjct: 77  VLADTAIRGHDLDEAKANEAKRAAEEALQNQSSDLDLARAQGELAVATAQ 126


>gi|114322015|ref|YP_743698.1| F0F1 ATP synthase subunit epsilon [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|119361409|sp|Q0A4M9.1|ATPE_ALHEH RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|114228409|gb|ABI58208.1| ATP synthase F1 subcomplex epsilon subunit [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 140

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 3/108 (2%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K +  P+  G  GI P H P L  L+PG + V +  G  +  +VS G I V     V ++
Sbjct: 21  KMLVAPAREGDIGITPRHAPLLTKLRPGEVRVQDENGEERFFYVSGGIIEVQ-PHKVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           A+ A     LD +AA++   +A+  L  A+ +  +  + +  E+AEA+
Sbjct: 80  ADTAARARDLDEAAAQEAKRRAEEAL--ANRKAGEDYSHVQAELAEAM 125


>gi|222150024|ref|YP_002550981.1| F0F1 ATP synthase subunit epsilon [Agrobacterium vitis S4]
 gi|254809341|sp|B9JTR1.1|ATPE_AGRVS RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|221737006|gb|ACM37969.1| ATP synthase C chain [Agrobacterium vitis S4]
          Length = 135

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 7/110 (6%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           AD  +F   S  ++  + + V +V +P+  G   ++ +H PT+ ++KPGV+TV    G +
Sbjct: 2   ADNFNFEFVSPERLLIS-EKVSEVVIPATEGEMTVMAHHAPTMTVIKPGVVTVKFASGKT 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSA 127
            K  +  G   +  +  + ++AE A PVD L    +RD L K + EL+ A
Sbjct: 61  GKYVIFGGFADITPE-RLTLLAESAVPVDEL----SRDTLMK-RIELAKA 104


>gi|341902518|gb|EGT58453.1| hypothetical protein CAEBREN_02454 [Caenorhabditis brenneri]
          Length = 172

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 59/138 (42%), Gaps = 33/138 (23%)

Query: 13  ARRGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYE 72
           A+    D++ FT AS +   ++N  VKQVDVP+ +G   +L NHVPT+ IL         
Sbjct: 31  AKNDNPDELRFTFASPDTAVFSNAVVKQVDVPTLAGMVHVLANHVPTIGILS-------- 82

Query: 73  TEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETA 132
                           + D +   +I+    PV SL+             E     SE A
Sbjct: 83  ---------------CLGDHNGRLMISMSPLPVLSLNLP----------EEPPDEGSEVA 117

Query: 133 KAEAQIAVEVAEALKIFV 150
           +AEAQ   +  E L+ F+
Sbjct: 118 RAEAQEPEKTTEYLESFL 135


>gi|419959807|ref|ZP_14475856.1| F0F1 ATP synthase subunit epsilon [Enterobacter cloacae subsp.
           cloacae GS1]
 gi|388605268|gb|EIM34489.1| F0F1 ATP synthase subunit epsilon [Enterobacter cloacae subsp.
           cloacae GS1]
          Length = 139

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    SV +
Sbjct: 21  VEKIQVTGSEGELGIFPGHAPLLTAIKPGMIRIVKQFGHEEFIYLSGGILEVQ-PGSVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  ++S         AS+E AKA A++ V
Sbjct: 80  LADTAIRGQDLDEARALESKRKAEEHINSSHGDVDYAQASAELAKAIAKLRV 131


>gi|209883748|ref|YP_002287605.1| F0F1 ATP synthase subunit epsilon [Oligotropha carboxidovorans OM5]
 gi|337742535|ref|YP_004634263.1| ATP synthase epsilon chain AtpC [Oligotropha carboxidovorans OM5]
 gi|386031500|ref|YP_005952275.1| ATP synthase subunit epsilon [Oligotropha carboxidovorans OM4]
 gi|226740271|sp|B6JD10.1|ATPE_OLICO RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|209871944|gb|ACI91740.1| ATP synthase F1, epsilon subunit [Oligotropha carboxidovorans OM5]
 gi|336096566|gb|AEI04392.1| ATP synthase epsilon chain AtpC [Oligotropha carboxidovorans OM4]
 gi|336100199|gb|AEI08022.1| ATP synthase epsilon chain AtpC [Oligotropha carboxidovorans OM5]
          Length = 136

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 65/118 (55%), Gaps = 5/118 (4%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F L S  K+ ++ + V+QVDVP   G FG+L  H P +A ++PG++TV    G  +KI V
Sbjct: 6   FDLVSPEKIAFSGE-VEQVDVPGVEGDFGVLAGHSPLVASVRPGILTVT-IGGKHEKIIV 63

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSS--ASSETAKAEAQI 138
             G   V+ +  + ++A+ A  +  LD +A    + + +S L +    +E  KA A++
Sbjct: 64  LGGLAEVS-EKGLTVLADTATSLADLDRAAFARQIEEMESNLKNEEPGNELDKAIARL 120


>gi|440228162|ref|YP_007335253.1| ATP synthase F1, epsilon subunit [Rhizobium tropici CIAT 899]
 gi|440039673|gb|AGB72707.1| ATP synthase F1, epsilon subunit [Rhizobium tropici CIAT 899]
          Length = 135

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 2/120 (1%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           AD  +F L S  ++  + Q V  V +P+  G   ++ NH PT+  +KPGV+ V+   G  
Sbjct: 2   ADNFNFELVSPERLLLSEQ-VIDVVIPASEGEMTVMANHAPTMTTIKPGVVKVHSASGKK 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           Q   V  G   +   +   ++AE A PV+ +        ++ A++EL  A     K+  +
Sbjct: 61  QDYVVFGGFADIL-PTGCTLLAESAVPVEDMSRDELDRRINAAKAELEDAEHHEHKSRLE 119


>gi|8272402|dbj|BAA96453.1| F1-ATPase [Pyrus pyrifolia]
          Length = 76

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 45/69 (65%)

Query: 79  KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 138
           K FVSSG   ++ +S   IIA EA P+D +DAS  +  L++   +L+SAS++  KAEAQI
Sbjct: 3   KYFVSSGFAFIHANSIADIIAVEAVPLDRVDASLVQKGLAEFTQKLNSASTDLEKAEAQI 62

Query: 139 AVEVAEALK 147
            V+V  AL 
Sbjct: 63  GVDVHSALN 71



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 45/68 (66%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           K FVSSG   ++ +S   IIA EA P+D +DAS  +  L++   +L+SAS++  KAEAQI
Sbjct: 3   KYFVSSGFAFIHANSIADIIAVEAVPLDRVDASLVQKGLAEFTQKLNSASTDLEKAEAQI 62

Query: 207 AVEVAEAL 214
            V+V  AL
Sbjct: 63  GVDVHSAL 70


>gi|354558889|ref|ZP_08978142.1| ATP synthase epsilon chain [Desulfitobacterium metallireducens DSM
           15288]
 gi|353545213|gb|EHC14665.1| ATP synthase epsilon chain [Desulfitobacterium metallireducens DSM
           15288]
          Length = 136

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 58/108 (53%), Gaps = 2/108 (1%)

Query: 36  QNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSV 95
           + ++ V +P   G  GILPNH P +A L  GV+  Y   G  +K+ +S G + V+++ + 
Sbjct: 19  EEIEFVVLPGVDGDLGILPNHAPMIAALDTGVVH-YTVNGNKKKLAISGGFVEVSENKAT 77

Query: 96  QIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
            ++A+ A   +S+D   A +  ++A+  L   + +T    A+ A+  A
Sbjct: 78  -VLADTAEFAESIDVQRALEAKARAEKRLLQKAHDTDMKRAEYALRRA 124


>gi|334702420|ref|ZP_08518286.1| F0F1 ATP synthase subunit epsilon [Aeromonas caviae Ae398]
          Length = 142

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 13/130 (10%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
            +D   A G K+F  +  V+   V    G  G+   H P L  +KPG++ + +  G  + 
Sbjct: 8   HLDVVSAEG-KLF--SGRVQSAQVSGSEGELGLRHGHAPLLTAIKPGLVRLIKQNGSEEV 64

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSE 130
           +++S G + V  + +V ++A+ A   D LD + A++   +A+  ++S         AS+E
Sbjct: 65  LYISGGMLEVQPE-AVTVLADTAIRADDLDEAKAQEAKRRAEERINSSHGDIDYAQASAE 123

Query: 131 TAKAEAQIAV 140
            AKA AQ+ V
Sbjct: 124 LAKAMAQLRV 133


>gi|159900586|ref|YP_001546833.1| ATP synthase F0F1 subunit epsilon [Herpetosiphon aurantiacus DSM
           785]
 gi|254809369|sp|A9AVV5.1|ATPE_HERA2 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|159893625|gb|ABX06705.1| ATP synthase F1, epsilon subunit [Herpetosiphon aurantiacus DSM
           785]
          Length = 136

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 2/109 (1%)

Query: 35  NQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSS 94
           ++ V  V  PS  G  GILP H P L +L+PG +  Y   GVS    +S G + V  +  
Sbjct: 16  SEEVDMVSAPSVEGRVGILPRHEPLLTVLQPGELH-YVKNGVSMPYAISGGFMEVLPN-R 73

Query: 95  VQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
           V I+A+ A   D +D + A     +A+  +    S    A A+IA+  A
Sbjct: 74  VTILADTAERADEIDETRAEQARLQAEQAMRDRQSTEDLARAEIALRRA 122


>gi|343493296|ref|ZP_08731624.1| F0F1 ATP synthase subunit epsilon [Vibrio nigripulchritudo ATCC
           27043]
 gi|342826383|gb|EGU60816.1| F0F1 ATP synthase subunit epsilon [Vibrio nigripulchritudo ATCC
           27043]
          Length = 140

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 13/131 (9%)

Query: 21  MDFTL--ASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQ 78
           M F L   S  K  ++   V+   V    G  GI P H P L  + PG++ V +  G  +
Sbjct: 4   MTFHLDVVSAEKKLFSGL-VETFQVTGSEGELGIYPGHTPLLTAITPGMVRVVKQHGHEE 62

Query: 79  KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQS---------ELSSASS 129
            I+VS G I V   ++  ++A+ A   + LDA+ A +   KA+          + + A+S
Sbjct: 63  VIYVSGGLIEVQPGTAT-VLADTAIRGEDLDAAKAEEAKRKAEESIHNQHGDMDFAQAAS 121

Query: 130 ETAKAEAQIAV 140
           E AKA AQ+ V
Sbjct: 122 ELAKAIAQLRV 132


>gi|303245590|ref|ZP_07331873.1| ATP synthase F1, epsilon subunit [Desulfovibrio fructosovorans JJ]
 gi|302492853|gb|EFL52718.1| ATP synthase F1, epsilon subunit [Desulfovibrio fructosovorans JJ]
          Length = 141

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 2/90 (2%)

Query: 35  NQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSS 94
           +Q+V+ V  P   G FG++ NH+P L+ L  G + +Y+  G +  IFVS G   V+ +  
Sbjct: 17  SQDVEYVGAPGLLGEFGVMANHIPFLSALGIGSL-MYKAGGKAHYIFVSGGFAEVSGN-K 74

Query: 95  VQIIAEEAHPVDSLDASAARDVLSKAQSEL 124
           V ++AE A   + +D   AR    +A+  L
Sbjct: 75  VTVLAEVAERPEDIDVERARRAQERAKQRL 104


>gi|289548935|ref|YP_003473923.1| ATP synthase F1 subunit epsilon [Thermocrinis albus DSM 14484]
 gi|289182552|gb|ADC89796.1| ATP synthase F1, epsilon subunit [Thermocrinis albus DSM 14484]
          Length = 133

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 56/95 (58%), Gaps = 5/95 (5%)

Query: 36  QNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIF-VSSGTITVNDDSS 94
            +V  V++P+  G  G+L  H+  + +LKPG++     +G  +  F V+ G + V   + 
Sbjct: 16  NDVTSVNIPTVEGEIGVLEKHMYLMTLLKPGLLYF---DGKQENGFAVTYGFVDVT-PTK 71

Query: 95  VQIIAEEAHPVDSLDASAARDVLSKAQSELSSASS 129
           V ++AEEA+P+ S+D    +++  +A  +L++A++
Sbjct: 72  VIVLAEEAYPIGSIDPGREKELFDEAVKKLATATT 106


>gi|224004096|ref|XP_002295699.1| F-type H-ATPase delta subunit [Thalassiosira pseudonana CCMP1335]
 gi|209585731|gb|ACI64416.1| F-type H-ATPase delta subunit [Thalassiosira pseudonana CCMP1335]
          Length = 137

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 2/95 (2%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           +++F L    +  Y    VK V VP   G + +  +HVP +A LK G++T+    G S+K
Sbjct: 16  KLNFNLP--QETLYDAAPVKSVVVPGAMGEYEVTADHVPIVAELKAGMLTINHEGGESEK 73

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAAR 114
            FV+ G    ++ S+  I+  EA  +D +D++A +
Sbjct: 74  YFVAGGFSLTHEGSTTDIVCPEAVKLDDIDSAAVQ 108


>gi|254485856|ref|ZP_05099061.1| ATP synthase F1, epsilon subunit [Roseobacter sp. GAI101]
 gi|214042725|gb|EEB83363.1| ATP synthase F1, epsilon subunit [Roseobacter sp. GAI101]
          Length = 145

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 3/112 (2%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           AD M F L S  +   + Q V  V +P   G    +P+H PTL  L+PGV+ V   EG +
Sbjct: 2   ADTMQFDLVSPERRLASMQ-VTAVQIPGADGDMTAMPDHAPTLTTLRPGVLRVEGPEGAT 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASS 129
           +  +V +G       + V ++AE A P   +      +++ +A++  S+A S
Sbjct: 61  E--YVVTGGFAEISAAGVSVLAERAVPKGEMTQEHLDEMMEEAKTMYSTAKS 110


>gi|414176629|ref|ZP_11430858.1| ATP synthase epsilon chain [Afipia broomeae ATCC 49717]
 gi|410886782|gb|EKS34594.1| ATP synthase epsilon chain [Afipia broomeae ATCC 49717]
          Length = 136

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 57/102 (55%), Gaps = 3/102 (2%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F L S  ++ ++ + V+QVD+P   G  G++  H P +  ++PGV+T+    G  +K+ V
Sbjct: 6   FNLVSPERIAFSGE-VEQVDIPGVEGDIGVMAGHSPLVTTIRPGVMTIT-AGGKHEKVIV 63

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSEL 124
             G   ++ D  + ++A+ A  V  LD +A  D +++ + +L
Sbjct: 64  LGGLAEIS-DKGLTVLADTATAVAELDLAAFADSIAQMEEDL 104


>gi|393769065|ref|ZP_10357593.1| F0F1 ATP synthase subunit epsilon [Methylobacterium sp. GXF4]
 gi|392725306|gb|EIZ82643.1| F0F1 ATP synthase subunit epsilon [Methylobacterium sp. GXF4]
          Length = 133

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 3/95 (3%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F      +  Y+ + V  V +P   G   ++P H P L  L+ GVI + E++G  ++I+V
Sbjct: 6   FDFVGPERTLYSGE-VTAVQLPGTEGEMTVMPGHAPVLTSLRVGVIVITESQGSGKRIYV 64

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSL-DASAARDV 116
             G   +   ++V ++AE A P++ L   S  RD+
Sbjct: 65  RGGFADIG-PTAVTVLAERAAPIEELTHESLDRDI 98


>gi|170049463|ref|XP_001856212.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167871285|gb|EDS34668.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 147

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 36/45 (80%)

Query: 97  IIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVE 141
           ++AEEAHPV+ LD  A R++LS AQ +LSSAS++  +AEA++ ++
Sbjct: 10  VLAEEAHPVEDLDVGACRELLSGAQGKLSSASTDVERAEAELPLK 54



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 36/45 (80%)

Query: 165 IIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVE 209
           ++AEEAHPV+ LD  A R++LS AQ +LSSAS++  +AEA++ ++
Sbjct: 10  VLAEEAHPVEDLDVGACRELLSGAQGKLSSASTDVERAEAELPLK 54


>gi|148266274|ref|YP_001232980.1| F0F1 ATP synthase subunit epsilon [Geobacter uraniireducens Rf4]
 gi|189081365|sp|A5G9D9.1|ATPE_GEOUR RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|146399774|gb|ABQ28407.1| ATP synthase F1 subcomplex epsilon subunit [Geobacter
           uraniireducens Rf4]
          Length = 138

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 2/83 (2%)

Query: 48  GAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDS 107
           G FG+LP H P L  LK G +  Y+ +GV Q + ++ G   V  D  V ++ E A   D 
Sbjct: 31  GEFGVLPGHAPFLTSLKIGELA-YKKDGVQQHMALNWGYFEVEGD-KVTVLVETAERADE 88

Query: 108 LDASAARDVLSKAQSELSSASSE 130
           +D   A+  L +A+  L   S E
Sbjct: 89  IDLERAKAALGRAEEALKKLSPE 111


>gi|345429155|ref|YP_004822272.1| F1 sector of membrane-bound ATP synthase subunit epsilon
           [Haemophilus parainfluenzae T3T1]
 gi|419803098|ref|ZP_14328272.1| ATP synthase F1, epsilon subunit [Haemophilus parainfluenzae HK262]
 gi|301155215|emb|CBW14680.1| F1 sector of membrane-bound ATP synthase, epsilon subunit
           [Haemophilus parainfluenzae T3T1]
 gi|385188268|gb|EIF35755.1| ATP synthase F1, epsilon subunit [Haemophilus parainfluenzae HK262]
          Length = 142

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 1/87 (1%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           VKQ+      G  GILPNH P +  +KPG++     +G  + I+VS G + V     V +
Sbjct: 20  VKQIQATGVEGELGILPNHTPLMTAIKPGIVKFTLEDGNEEVIYVSGGFLEVQ-PKVVTV 78

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSEL 124
           +A+ A     LDA   R+   KA+  +
Sbjct: 79  LADVAIRGSELDADRIREAKRKAEENI 105


>gi|90409080|ref|ZP_01217204.1| ATP synthase subunit epsilon [Psychromonas sp. CNPT3]
 gi|90309807|gb|EAS37968.1| ATP synthase subunit epsilon [Psychromonas sp. CNPT3]
          Length = 139

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 1/94 (1%)

Query: 37  NVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQ 96
            V  + V    G  GI+P H P L  +KPGVI + +  G  + I++S G + V   SSV 
Sbjct: 22  RVSHLSVSGQEGELGIMPGHTPLLTAIKPGVIKLVKQGGAEEVIYISGGFLEVQ-PSSVT 80

Query: 97  IIAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
           I+A+ A   + LD + A +    A+ +L + + +
Sbjct: 81  ILADTAIRAEDLDQAKAEEAARIAKEQLDNPTKD 114


>gi|22128002|ref|NP_671425.1| ATP synthase F0F1 subunit epsilon [Yersinia pestis KIM10+]
 gi|45443750|ref|NP_995289.1| ATP synthase F0F1 subunit epsilon [Yersinia pestis biovar Microtus
           str. 91001]
 gi|150260946|ref|ZP_01917674.1| ATP synthase epsilon subunit protein [Yersinia pestis CA88-4125]
 gi|153948726|ref|YP_001403117.1| F0F1 ATP synthase subunit epsilon [Yersinia pseudotuberculosis IP
           31758]
 gi|162420709|ref|YP_001608471.1| F0F1 ATP synthase subunit epsilon [Yersinia pestis Angola]
 gi|165926212|ref|ZP_02222044.1| ATP synthase F1, epsilon subunit [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165939962|ref|ZP_02228499.1| ATP synthase F1, epsilon subunit [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166009508|ref|ZP_02230406.1| ATP synthase F1, epsilon subunit [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166213343|ref|ZP_02239378.1| ATP synthase F1, epsilon subunit [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|167401657|ref|ZP_02307151.1| ATP synthase F1, epsilon subunit [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167422829|ref|ZP_02314582.1| ATP synthase F1, epsilon subunit [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167425463|ref|ZP_02317216.1| ATP synthase F1, epsilon subunit [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167468116|ref|ZP_02332820.1| ATP synthase F1, epsilon subunit [Yersinia pestis FV-1]
 gi|170026431|ref|YP_001722936.1| F0F1 ATP synthase subunit epsilon [Yersinia pseudotuberculosis
           YPIII]
 gi|186897469|ref|YP_001874581.1| F0F1 ATP synthase subunit epsilon [Yersinia pseudotuberculosis
           PB1/+]
 gi|218931096|ref|YP_002348971.1| ATP synthase F0F1 subunit epsilon [Yersinia pestis CO92]
 gi|229839829|ref|ZP_04459988.1| F1 sector of membrane-bound ATP synthase, epsilon subunit [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229841914|ref|ZP_04462070.1| F1 sector of membrane-bound ATP synthase, epsilon subunit [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229896791|ref|ZP_04511954.1| F1 sector of membrane-bound ATP synthase, epsilon subunit [Yersinia
           pestis Pestoides A]
 gi|229904680|ref|ZP_04519791.1| F1 sector of membrane-bound ATP synthase, epsilon subunit [Yersinia
           pestis Nepal516]
 gi|270488390|ref|ZP_06205464.1| ATP synthase F1, epsilon subunit [Yersinia pestis KIM D27]
 gi|284987828|ref|YP_072441.2| ATP synthase F0F1 subunit epsilon [Yersinia pseudotuberculosis IP
           32953]
 gi|284988146|ref|YP_001165229.2| F0F1 ATP synthase subunit epsilon [Yersinia pestis Pestoides F]
 gi|284988375|ref|YP_649904.2| F0F1 ATP synthase subunit epsilon [Yersinia pestis Nepal516]
 gi|284988610|ref|YP_654071.2| F0F1 ATP synthase subunit epsilon [Yersinia pestis Antiqua]
 gi|294505643|ref|YP_003569705.1| ATP synthase subunit epsilon [Yersinia pestis Z176003]
 gi|384124212|ref|YP_005506832.1| ATP synthase subunit epsilon [Yersinia pestis D106004]
 gi|384128080|ref|YP_005510694.1| ATP synthase subunit epsilon [Yersinia pestis D182038]
 gi|384138029|ref|YP_005520731.1| F0F1 ATP synthase subunit epsilon [Yersinia pestis A1122]
 gi|384416950|ref|YP_005626312.1| F1 sector of membrane-bound ATP synthase, epsilon subunit [Yersinia
           pestis biovar Medievalis str. Harbin 35]
 gi|420549377|ref|ZP_15047097.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-01]
 gi|420554721|ref|ZP_15051862.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-02]
 gi|420560355|ref|ZP_15056744.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-03]
 gi|420565720|ref|ZP_15061581.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-04]
 gi|420570742|ref|ZP_15066150.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-05]
 gi|420576445|ref|ZP_15071300.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-06]
 gi|420581696|ref|ZP_15076080.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-07]
 gi|420587124|ref|ZP_15080991.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-08]
 gi|420592209|ref|ZP_15085561.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-09]
 gi|420597565|ref|ZP_15090376.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-10]
 gi|420603275|ref|ZP_15095441.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-11]
 gi|420608670|ref|ZP_15100344.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-12]
 gi|420614061|ref|ZP_15105170.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-13]
 gi|420619432|ref|ZP_15109838.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-14]
 gi|420624726|ref|ZP_15114628.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-15]
 gi|420629710|ref|ZP_15119153.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-16]
 gi|420634871|ref|ZP_15123774.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-19]
 gi|420640149|ref|ZP_15128527.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-25]
 gi|420645575|ref|ZP_15133496.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-29]
 gi|420650921|ref|ZP_15138304.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-32]
 gi|420656525|ref|ZP_15143354.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-34]
 gi|420661983|ref|ZP_15148220.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-36]
 gi|420667309|ref|ZP_15153022.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-42]
 gi|420672178|ref|ZP_15157460.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-45]
 gi|420677520|ref|ZP_15162328.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-46]
 gi|420683109|ref|ZP_15167356.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-47]
 gi|420688483|ref|ZP_15172143.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-48]
 gi|420693790|ref|ZP_15176778.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-52]
 gi|420699501|ref|ZP_15181811.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-53]
 gi|420705449|ref|ZP_15186465.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-54]
 gi|420710643|ref|ZP_15191180.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-55]
 gi|420716170|ref|ZP_15196076.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-56]
 gi|420721719|ref|ZP_15200806.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-58]
 gi|420727145|ref|ZP_15205616.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-59]
 gi|420732635|ref|ZP_15210555.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-60]
 gi|420737628|ref|ZP_15215064.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-61]
 gi|420743117|ref|ZP_15220002.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-63]
 gi|420749038|ref|ZP_15224948.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-64]
 gi|420754261|ref|ZP_15229671.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-65]
 gi|420760333|ref|ZP_15234471.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-66]
 gi|420765401|ref|ZP_15239036.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-71]
 gi|420770653|ref|ZP_15243737.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-72]
 gi|420775621|ref|ZP_15248247.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-76]
 gi|420781253|ref|ZP_15253179.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-88]
 gi|420786882|ref|ZP_15258104.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-89]
 gi|420791890|ref|ZP_15262622.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-90]
 gi|420797466|ref|ZP_15267630.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-91]
 gi|420802565|ref|ZP_15272215.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-92]
 gi|420807895|ref|ZP_15277052.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-93]
 gi|420813319|ref|ZP_15281893.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-94]
 gi|420818748|ref|ZP_15286834.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-95]
 gi|420824128|ref|ZP_15291633.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-96]
 gi|420829181|ref|ZP_15296196.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-98]
 gi|420834771|ref|ZP_15301235.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-99]
 gi|420839704|ref|ZP_15305701.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-100]
 gi|420844921|ref|ZP_15310430.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-101]
 gi|420850569|ref|ZP_15315502.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-102]
 gi|420856330|ref|ZP_15320331.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-103]
 gi|420861391|ref|ZP_15324821.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-113]
 gi|421765642|ref|ZP_16202425.1| F0F1 ATP synthase subunit epsilon [Yersinia pestis INS]
 gi|20137294|sp|P58647.1|ATPE_YERPE RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|166990388|sp|A7FPD9.1|ATPE_YERP3 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|226740306|sp|B2K848.1|ATPE_YERPB RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|226740307|sp|A9R5T8.1|ATPE_YERPG RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|226740308|sp|B1JRN3.1|ATPE_YERPY RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|21961150|gb|AAM87676.1|AE014015_1 membrane-bound ATP synthase, F1 sector, epsilon-subunit [Yersinia
           pestis KIM10+]
 gi|45438620|gb|AAS64166.1| ATP synthase epsilon subunit protein [Yersinia pestis biovar
           Microtus str. 91001]
 gi|115349707|emb|CAL22688.1| ATP synthase epsilon subunit protein [Yersinia pestis CO92]
 gi|149290354|gb|EDM40431.1| ATP synthase epsilon subunit protein [Yersinia pestis CA88-4125]
 gi|152960221|gb|ABS47682.1| ATP synthase F1, epsilon subunit [Yersinia pseudotuberculosis IP
           31758]
 gi|162353524|gb|ABX87472.1| ATP synthase F1, epsilon subunit [Yersinia pestis Angola]
 gi|165912088|gb|EDR30728.1| ATP synthase F1, epsilon subunit [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165922072|gb|EDR39249.1| ATP synthase F1, epsilon subunit [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165991430|gb|EDR43731.1| ATP synthase F1, epsilon subunit [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166205641|gb|EDR50121.1| ATP synthase F1, epsilon subunit [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|166958221|gb|EDR55242.1| ATP synthase F1, epsilon subunit [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167049039|gb|EDR60447.1| ATP synthase F1, epsilon subunit [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167055477|gb|EDR65270.1| ATP synthase F1, epsilon subunit [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169752965|gb|ACA70483.1| ATP synthase F1, epsilon subunit [Yersinia pseudotuberculosis
           YPIII]
 gi|186700495|gb|ACC91124.1| ATP synthase F1, epsilon subunit [Yersinia pseudotuberculosis
           PB1/+]
 gi|229678798|gb|EEO74903.1| F1 sector of membrane-bound ATP synthase, epsilon subunit [Yersinia
           pestis Nepal516]
 gi|229691253|gb|EEO83306.1| F1 sector of membrane-bound ATP synthase, epsilon subunit [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229696195|gb|EEO86242.1| F1 sector of membrane-bound ATP synthase, epsilon subunit [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229700229|gb|EEO88265.1| F1 sector of membrane-bound ATP synthase, epsilon subunit [Yersinia
           pestis Pestoides A]
 gi|262363808|gb|ACY60529.1| ATP synthase subunit epsilon [Yersinia pestis D106004]
 gi|262367744|gb|ACY64301.1| ATP synthase subunit epsilon [Yersinia pestis D182038]
 gi|270336894|gb|EFA47671.1| ATP synthase F1, epsilon subunit [Yersinia pestis KIM D27]
 gi|294356102|gb|ADE66443.1| ATP synthase subunit epsilon [Yersinia pestis Z176003]
 gi|320017454|gb|ADW01026.1| F1 sector of membrane-bound ATP synthase, epsilon subunit [Yersinia
           pestis biovar Medievalis str. Harbin 35]
 gi|342853158|gb|AEL71711.1| F0F1 ATP synthase subunit epsilon [Yersinia pestis A1122]
 gi|391420224|gb|EIQ83032.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-01]
 gi|391420250|gb|EIQ83057.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-02]
 gi|391420301|gb|EIQ83107.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-03]
 gi|391435317|gb|EIQ96386.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-04]
 gi|391436706|gb|EIQ97636.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-05]
 gi|391440068|gb|EIR00672.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-06]
 gi|391452417|gb|EIR11821.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-08]
 gi|391452453|gb|EIR11856.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-07]
 gi|391454132|gb|EIR13372.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-09]
 gi|391468023|gb|EIR25934.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-10]
 gi|391468832|gb|EIR26671.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-11]
 gi|391470327|gb|EIR28006.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-12]
 gi|391484255|gb|EIR40540.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-13]
 gi|391485380|gb|EIR41527.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-14]
 gi|391485664|gb|EIR41781.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-15]
 gi|391500211|gb|EIR54736.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-16]
 gi|391500450|gb|EIR54951.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-19]
 gi|391505156|gb|EIR59189.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-25]
 gi|391516630|gb|EIR69501.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-29]
 gi|391517281|gb|EIR70101.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-34]
 gi|391517789|gb|EIR70558.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-32]
 gi|391530441|gb|EIR82019.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-36]
 gi|391533521|gb|EIR84785.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-42]
 gi|391535673|gb|EIR86729.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-45]
 gi|391549013|gb|EIR98753.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-47]
 gi|391549119|gb|EIR98852.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-46]
 gi|391549535|gb|EIR99233.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-48]
 gi|391563550|gb|EIS11855.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-52]
 gi|391565037|gb|EIS13189.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-53]
 gi|391567735|gb|EIS15566.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-54]
 gi|391578999|gb|EIS25181.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-55]
 gi|391580273|gb|EIS26292.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-56]
 gi|391590726|gb|EIS35404.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-58]
 gi|391594287|gb|EIS38453.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-60]
 gi|391594933|gb|EIS39031.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-59]
 gi|391608940|gb|EIS51386.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-61]
 gi|391609318|gb|EIS51727.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-63]
 gi|391609948|gb|EIS52294.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-64]
 gi|391622303|gb|EIS63241.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-65]
 gi|391624166|gb|EIS64840.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-66]
 gi|391632667|gb|EIS72165.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-71]
 gi|391634194|gb|EIS73497.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-72]
 gi|391644630|gb|EIS82605.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-76]
 gi|391647468|gb|EIS85093.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-88]
 gi|391651723|gb|EIS88861.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-89]
 gi|391657678|gb|EIS94167.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-90]
 gi|391665071|gb|EIT00692.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-91]
 gi|391674371|gb|EIT08981.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-93]
 gi|391674577|gb|EIT09168.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-94]
 gi|391674723|gb|EIT09308.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-92]
 gi|391688579|gb|EIT21780.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-95]
 gi|391690486|gb|EIT23511.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-96]
 gi|391692261|gb|EIT25120.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-98]
 gi|391705758|gb|EIT37265.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-99]
 gi|391706505|gb|EIT37934.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-100]
 gi|391707044|gb|EIT38433.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-101]
 gi|391721620|gb|EIT51524.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-102]
 gi|391721645|gb|EIT51548.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-103]
 gi|391722526|gb|EIT52320.1| ATP synthase F1, epsilon subunit [Yersinia pestis PY-113]
 gi|411172962|gb|EKS43011.1| F0F1 ATP synthase subunit epsilon [Yersinia pestis INS]
          Length = 140

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 59/114 (51%), Gaps = 14/114 (12%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V   S V +
Sbjct: 22  VQKIQVTGSEGELGIFPGHAPLLTAIKPGMIRIVKQFGEEEFIYLSGGILEVQ-PSVVIV 80

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSE-----------LSSASSETAKAEAQIAV 140
           +A+ A  +  LD   AR + SK ++E            + AS+E AKA A++ V
Sbjct: 81  LADTA--IRGLDLDEARALESKRKAEAHINNSHGDVDYAQASAELAKAIAKLRV 132


>gi|410085837|ref|ZP_11282552.1| ATP synthase epsilon chain [Morganella morganii SC01]
 gi|421493147|ref|ZP_15940505.1| ATPC [Morganella morganii subsp. morganii KT]
 gi|455737628|ref|YP_007503894.1| ATP synthase epsilon chain [Morganella morganii subsp. morganii KT]
 gi|400192775|gb|EJO25913.1| ATPC [Morganella morganii subsp. morganii KT]
 gi|409767782|gb|EKN51856.1| ATP synthase epsilon chain [Morganella morganii SC01]
 gi|455419191|gb|AGG29521.1| ATP synthase epsilon chain [Morganella morganii subsp. morganii KT]
          Length = 141

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 64/127 (50%), Gaps = 11/127 (8%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
            T+ S  K  +    V+++ V    G  GI P H P L  +KPG++ + +  G  + I++
Sbjct: 8   LTVVSAEKQLFKGL-VQKIQVTGSEGELGIYPMHTPLLTAIKPGMVRIVKQFGEEELIYL 66

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSEL---------SSASSETAK 133
           S G + V  +  + ++A+ A   + LDA+ A +   +A+  +         + AS+E AK
Sbjct: 67  SGGMLEVQPNGVI-VLADTAIRANDLDAALAMESKRRAEENIRKAHGDVDYAQASAELAK 125

Query: 134 AEAQIAV 140
           A A++ V
Sbjct: 126 AIAKLRV 132


>gi|383815575|ref|ZP_09970986.1| F0F1 ATP synthase subunit epsilon [Serratia sp. M24T3]
 gi|383295607|gb|EIC83930.1| F0F1 ATP synthase subunit epsilon [Serratia sp. M24T3]
          Length = 141

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 15/125 (12%)

Query: 27  SGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGT 86
           S  K  Y+   V+++ V    G  GI P H P L  +KPG++ + +  G  + I++S G 
Sbjct: 12  SAEKRMYSGL-VQKIQVTGSEGELGIFPGHAPLLTAIKPGMVRIVKEHGEEEYIYLSGGI 70

Query: 87  ITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSE-----------LSSASSETAKAE 135
           + V  +++  ++A+ A  +  +D   AR + +K ++E            + AS+E AKA 
Sbjct: 71  LEVQPNATT-VLADTA--IRGVDLDEARALEAKRKAEEHINGSNGDVDYARASAELAKAL 127

Query: 136 AQIAV 140
           A++ V
Sbjct: 128 AKLRV 132


>gi|350560207|ref|ZP_08929047.1| ATP synthase F1, epsilon subunit [Thioalkalivibrio thiocyanoxidans
           ARh 4]
 gi|349782475|gb|EGZ36758.1| ATP synthase F1, epsilon subunit [Thioalkalivibrio thiocyanoxidans
           ARh 4]
          Length = 140

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 5/109 (4%)

Query: 44  PSFSGAFGILPNHVPTLAILKPGVITVYETE-GVSQKIFVSSGTITVNDDSSVQIIAEEA 102
           P+  G  G+ P H   LA LKPG + + E+E G  Q +FVS G I V     V ++A+ A
Sbjct: 27  PTELGEIGVYPRHTQLLARLKPGELRIRESEQGEPQHVFVSGGIIEVQ-PHVVTVLADTA 85

Query: 103 HPVDSLDASAARDVLSKAQSELSSASSE--TAKAEAQIAVEVAEALKIF 149
                LD + A +   +A+  L+ + +E   AKA+A++ VE A  L++ 
Sbjct: 86  IRAKDLDEAEALEAKRRAEDALAHSKAEFDYAKAQAEL-VEAAARLQMI 133


>gi|400405597|ref|YP_006588456.1| ATP synthase F1 subunit epsilon [secondary endosymbiont of
           Ctenarytaina eucalypti]
 gi|400363960|gb|AFP85028.1| ATP synthase, F1 epsilon subunit [secondary endosymbiont of
           Ctenarytaina eucalypti]
          Length = 140

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 59/113 (52%), Gaps = 5/113 (4%)

Query: 29  NKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTIT 88
            K+F+    V+++ V    G  GI P H P L  ++PG++ + +     + I++S G + 
Sbjct: 15  KKIFFGV--VEKIQVTGSEGELGIFPGHAPLLTAIQPGMVRIVKEHCTEEYIYLSGGMLE 72

Query: 89  VNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSET--AKAEAQIA 139
           V   SSV I+A+ A     LD S   D   +A+  +++  S+   A+A A+++
Sbjct: 73  VQ-PSSVTILADTAIRGKDLDESRVLDSKRRAEDHMNNCHSDLDYARASAELS 124


>gi|148378163|ref|YP_001252704.1| ATP synthase F0F1 subunit epsilon [Clostridium botulinum A str.
           ATCC 3502]
 gi|153931834|ref|YP_001382564.1| F0F1 ATP synthase subunit epsilon [Clostridium botulinum A str.
           ATCC 19397]
 gi|153934961|ref|YP_001386116.1| ATP synthase F0F1 subunit epsilon [Clostridium botulinum A str.
           Hall]
 gi|421835870|ref|ZP_16270508.1| F0F1 ATP synthase subunit epsilon [Clostridium botulinum
           CFSAN001627]
 gi|166222449|sp|A7FQI0.1|ATPE_CLOB1 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|166222450|sp|A5HY53.1|ATPE_CLOBH RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|148287647|emb|CAL81712.1| ATP synthase epsilon chain [Clostridium botulinum A str. ATCC 3502]
 gi|152927878|gb|ABS33378.1| ATP synthase F1, epsilon subunit [Clostridium botulinum A str. ATCC
           19397]
 gi|152930875|gb|ABS36374.1| ATP synthase F1, epsilon subunit [Clostridium botulinum A str.
           Hall]
 gi|409742386|gb|EKN41812.1| F0F1 ATP synthase subunit epsilon [Clostridium botulinum
           CFSAN001627]
          Length = 133

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 2/110 (1%)

Query: 19  DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQ 78
           D ++ T+ +  K     + +K+V      G   ILPNHV  +  LKP +    +  G   
Sbjct: 3   DNIELTIFTPEKNIKIGE-IKEVITEGLDGDLAILPNHVNMITYLKPTITKYIDLNGNKN 61

Query: 79  KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS 128
            IF SSG + V +D+ V II + +   + +D   A +   +A+  L +  
Sbjct: 62  NIFTSSGVLKV-EDNKVYIICDASEKPEDIDIKRAENARKRAEERLRNKK 110


>gi|222087436|ref|YP_002545973.1| F0F1 ATP synthase subunit epsilon [Agrobacterium radiobacter K84]
 gi|254809340|sp|B9JBZ4.1|ATPE_AGRRK RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|221724884|gb|ACM28040.1| ATP synthase F1, epsilon subunit [Agrobacterium radiobacter K84]
          Length = 135

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 2/120 (1%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           AD  +F L S  ++  + Q V  V +P+  G   ++ +H PT+  +KPGV+ V+   G  
Sbjct: 2   ADNFNFELVSPERLLLSEQ-VIDVVIPASEGEMTVMAHHAPTMTTIKPGVVKVHSASGKK 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           Q   V  G   +   +   ++AE A PV+ L+       ++ A++EL  A     K+  +
Sbjct: 61  QDYVVFGGFADIL-PTGCTLLAESAIPVEDLNQDELTRRINAAKAELEDAEHHEHKSRLE 119


>gi|254250179|ref|ZP_04943499.1| F0F1-type ATP synthase, epsilon subunit [Burkholderia cenocepacia
           PC184]
 gi|124876680|gb|EAY66670.1| F0F1-type ATP synthase, epsilon subunit [Burkholderia cenocepacia
           PC184]
          Length = 143

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 4/112 (3%)

Query: 43  VPSFSGAFGILPNHVPTLAILKPGVITVYETE-GVSQKIFVSSGTITVNDDSSVQIIAEE 101
           VP  SG  GI P+H P L  ++PGV+T+ +   G  +++ V+ G + V+ D  V +IA+ 
Sbjct: 17  VPGESGELGIYPHHAPLLTRIRPGVVTLVDAPTGEHRRLLVAGGVLEVSRD-GVTLIADH 75

Query: 102 AHPVDSLDASAARDVLSKAQSELSSASSETAKA--EAQIAVEVAEALKIFVS 151
           A     LD   AR+    A       + E  +A   A    E+ E ++ F +
Sbjct: 76  ALRTPELDELRAREARHAADDWRQRYAHENRRAFDFASARAELMEEIRRFFA 127


>gi|386772576|ref|ZP_10094954.1| F0F1-type ATP synthase, epsilon subunit [Brachybacterium
          paraconglomeratum LC44]
          Length = 93

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 1/72 (1%)

Query: 21 MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
          ++ T  + ++  +T Q   QV VP+  G+ GILP   PTLAIL  GV+ +++ +G   + 
Sbjct: 4  LEVTFVTADRTVWTGQ-ASQVVVPAIDGSMGILPQMQPTLAILGDGVVRIHDLDGHVDER 62

Query: 81 FVSSGTITVNDD 92
           VS G ++V+ D
Sbjct: 63 SVSGGFVSVDSD 74


>gi|298530315|ref|ZP_07017717.1| ATP synthase F1, epsilon subunit [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298509689|gb|EFI33593.1| ATP synthase F1, epsilon subunit [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 142

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 2/89 (2%)

Query: 36  QNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSV 95
           ++V+ V  P  SG FG+L NH P L  L  G +  Y+ EG    +FVS G   V   + V
Sbjct: 19  EDVEYVGAPGVSGEFGVLHNHTPFLTALSIGSL-FYKKEGRKYFVFVSGGFTEVT-PTKV 76

Query: 96  QIIAEEAHPVDSLDASAARDVLSKAQSEL 124
            I+AE A   D +    AR    +A+  L
Sbjct: 77  SILAEVAEKADEISIERARKAKERAEQRL 105


>gi|170747036|ref|YP_001753296.1| F0F1 ATP synthase subunit epsilon [Methylobacterium radiotolerans
           JCM 2831]
 gi|170653558|gb|ACB22613.1| ATP synthase F1, epsilon subunit [Methylobacterium radiotolerans
           JCM 2831]
          Length = 133

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 3/95 (3%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F      +  Y+ + V  V +P   G   ++P H P L  L+ GVI + E++G  ++I+V
Sbjct: 6   FDFVGPERTLYSGE-VTAVQLPGTEGEMTVMPGHAPVLTSLRVGVIVITESQGSGKRIYV 64

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSL-DASAARDV 116
             G   +   ++V ++AE A P++ L   S  RD+
Sbjct: 65  RGGFADIG-PTAVTVLAERAAPIEELTHESLDRDI 98


>gi|373456444|ref|ZP_09548211.1| ATP synthase epsilon chain [Caldithrix abyssi DSM 13497]
 gi|371718108|gb|EHO39879.1| ATP synthase epsilon chain [Caldithrix abyssi DSM 13497]
          Length = 135

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 54/103 (52%), Gaps = 1/103 (0%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+   +P + G F +LPNH   +++L+ G + V   +G  + I ++ G   V D+ +++I
Sbjct: 21  VRSCTLPGYEGLFQVLPNHANLISVLEIGPLKVLLKDGKERYIALNGGYCEVKDN-ALKI 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           +AE A   + +D   A     +A+  L S  ++     AQ+A+
Sbjct: 80  MAESAEFAEDIDVERANAARQRAEQRLHSKHADIDIPRAQLAL 122


>gi|60389534|sp|Q663Q9.1|ATPE_YERPS RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|119367811|sp|Q1C096.1|ATPE_YERPA RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|119367812|sp|Q1CCH6.1|ATPE_YERPN RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|166990389|sp|A4TSJ4.1|ATPE_YERPP RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|51591532|emb|CAH23204.1| ATP synthase epsilon subunit protein [Yersinia pseudotuberculosis
           IP 32953]
 gi|108777785|gb|ABG20304.1| ATP synthase epsilon subunit protein [Yersinia pestis Nepal516]
 gi|108782068|gb|ABG16126.1| ATP synthase epsilon subunit protein [Yersinia pestis Antiqua]
 gi|145212849|gb|ABP42256.1| ATP synthase epsilon subunit protein [Yersinia pestis Pestoides F]
          Length = 137

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 59/114 (51%), Gaps = 14/114 (12%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V   S V +
Sbjct: 19  VQKIQVTGSEGELGIFPGHAPLLTAIKPGMIRIVKQFGEEEFIYLSGGILEVQ-PSVVIV 77

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSE-----------LSSASSETAKAEAQIAV 140
           +A+ A  +  LD   AR + SK ++E            + AS+E AKA A++ V
Sbjct: 78  LADTA--IRGLDLDEARALESKRKAEAHINNSHGDVDYAQASAELAKAIAKLRV 129


>gi|116328612|ref|YP_798332.1| F0F1 ATP synthase subunit epsilon [Leptospira borgpetersenii
           serovar Hardjo-bovis str. L550]
 gi|116331341|ref|YP_801059.1| F0F1 ATP synthase subunit epsilon [Leptospira borgpetersenii
           serovar Hardjo-bovis str. JB197]
 gi|122280913|sp|Q04S19.1|ATPE_LEPBJ RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|122283601|sp|Q04ZU6.1|ATPE_LEPBL RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|116121356|gb|ABJ79399.1| epsilon subunit of the H(+)-transporting two- sector ATPase, F1
           sector [Leptospira borgpetersenii serovar Hardjo-bovis
           str. L550]
 gi|116125030|gb|ABJ76301.1| epsilon subunit of the H(+)-transporting two- sector ATPase, F1
           sector [Leptospira borgpetersenii serovar Hardjo-bovis
           str. JB197]
          Length = 127

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 17  YADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGV 76
           +A +++ ++ S  K+ Y  + V  + VP   G FGILPNH P +A L  GV+ + + E +
Sbjct: 2   FAHKLNVSVISPEKILYKGE-VDSLVVPGSEGFFGILPNHAPLVATLGIGVLEIRKGEKL 60

Query: 77  SQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSET 131
            + I V  G I V D+ +V I+ +     + +D  A +  L++ + +LS + S+ 
Sbjct: 61  -KNISVEGGFIEVKDN-TVSILTDHGALKEDIDIEAEKKALAEVE-KLSPSDSKN 112


>gi|68076939|ref|XP_680389.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56501315|emb|CAH98128.1| conserved hypothetical protein [Plasmodium berghei]
          Length = 154

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 6/133 (4%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
            +  T++S ++  + NQ +K+  VP   G F I  NH P + +L+ GVITV   E   ++
Sbjct: 17  NLYLTISSSSESIFRNQAIKRASVPGIEGYFTITNNHSPLITLLRNGVITVEFDEKEKKQ 76

Query: 80  IFVSSGTITVNDDSSV------QIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAK 133
            F+S G       +        +I+  E  P++ LD +    VL +  +   +   +  K
Sbjct: 77  FFISDGIFIYKKSNDNNNNNNAEIVGIEIVPLEYLDKNKTVKVLQQMCAINDTTDDKWRK 136

Query: 134 AEAQIAVEVAEAL 146
            +  +  E+  ++
Sbjct: 137 IKTMMGKELCSSI 149


>gi|436841068|ref|YP_007325446.1| ATP synthase (subunit epsilon, F1 subunit) [Desulfovibrio
           hydrothermalis AM13 = DSM 14728]
 gi|432169974|emb|CCO23345.1| ATP synthase (subunit epsilon, F1 subunit) [Desulfovibrio
           hydrothermalis AM13 = DSM 14728]
          Length = 142

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 4/93 (4%)

Query: 36  QNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEG-VSQKIFVSSGTITVNDDSS 94
           Q V  V  P   G FGI+ NH+P L+ L  GV  +Y  EG  +  IF+S G   V ++  
Sbjct: 19  QEVDYVGAPGIEGEFGIMANHIPFLSAL--GVGNLYFKEGNRTHYIFISGGFAEVGNN-K 75

Query: 95  VQIIAEEAHPVDSLDASAARDVLSKAQSELSSA 127
           V I+AE A     +D + A+    KA++ L+ A
Sbjct: 76  VTILAEVAEKAVEIDIARAQKAQEKAKARLAKA 108


>gi|154687795|ref|YP_001422956.1| F0F1 ATP synthase subunit epsilon [Bacillus amyloliquefaciens
           FZB42]
 gi|375364120|ref|YP_005132159.1| F0F1 ATP synthase subunit epsilon [Bacillus amyloliquefaciens
           subsp. plantarum CAU B946]
 gi|384267215|ref|YP_005422922.1| F0F1 ATP synthase subunit epsilon [Bacillus amyloliquefaciens
           subsp. plantarum YAU B9601-Y2]
 gi|385266588|ref|ZP_10044675.1| F0F1 ATP synthase subunit epsilon [Bacillus sp. 5B6]
 gi|394991226|ref|ZP_10384033.1| F0F1 ATP synthase subunit epsilon [Bacillus sp. 916]
 gi|421729915|ref|ZP_16169044.1| F0F1 ATP synthase subunit epsilon [Bacillus amyloliquefaciens
           subsp. plantarum M27]
 gi|429506974|ref|YP_007188158.1| F0F1 ATP synthase subunit epsilon [Bacillus amyloliquefaciens
           subsp. plantarum AS43.3]
 gi|451345162|ref|YP_007443793.1| F0F1 ATP synthase subunit epsilon [Bacillus amyloliquefaciens
           IT-45]
 gi|452857305|ref|YP_007498988.1| ATP synthase (subunit epsilon, F1 subunit) [Bacillus
           amyloliquefaciens subsp. plantarum UCMB5036]
 gi|166222432|sp|A7Z9P9.1|ATPE_BACA2 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|154353646|gb|ABS75725.1| AtpC [Bacillus amyloliquefaciens FZB42]
 gi|371570114|emb|CCF06964.1| F0F1 ATP synthase subunit epsilon [Bacillus amyloliquefaciens
           subsp. plantarum CAU B946]
 gi|380500568|emb|CCG51606.1| F0F1 ATP synthase subunit epsilon [Bacillus amyloliquefaciens
           subsp. plantarum YAU B9601-Y2]
 gi|385151084|gb|EIF15021.1| F0F1 ATP synthase subunit epsilon [Bacillus sp. 5B6]
 gi|393807998|gb|EJD69310.1| F0F1 ATP synthase subunit epsilon [Bacillus sp. 916]
 gi|407075881|gb|EKE48865.1| F0F1 ATP synthase subunit epsilon [Bacillus amyloliquefaciens
           subsp. plantarum M27]
 gi|429488564|gb|AFZ92488.1| F0F1 ATP synthase subunit epsilon [Bacillus amyloliquefaciens
           subsp. plantarum AS43.3]
 gi|449848920|gb|AGF25912.1| F0F1 ATP synthase subunit epsilon [Bacillus amyloliquefaciens
           IT-45]
 gi|452081565|emb|CCP23335.1| ATP synthase (subunit epsilon, F1 subunit) [Bacillus
           amyloliquefaciens subsp. plantarum UCMB5036]
          Length = 132

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 2/107 (1%)

Query: 37  NVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQ 96
           +++ V V + SG  GILP H+PT+A LK G + + + +G ++   VS G + V  D  V 
Sbjct: 19  DIEMVSVRAESGDLGILPGHIPTVAPLKIGAVRL-KKDGQTELAAVSGGFLEVRPD-QVT 76

Query: 97  IIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
           I+A+ A   +S+D   A     +A+  L+  S +T    A++A++ A
Sbjct: 77  ILAQAAETAESIDKERALAAKKRAEDRLNKRSDDTDIRRAELALQRA 123


>gi|317494644|ref|ZP_07953056.1| ATP synthase F1 [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|365836850|ref|ZP_09378234.1| ATP synthase F1, epsilon subunit [Hafnia alvei ATCC 51873]
 gi|316917246|gb|EFV38593.1| ATP synthase F1 [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|364563047|gb|EHM40867.1| ATP synthase F1, epsilon subunit [Hafnia alvei ATCC 51873]
          Length = 139

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  G+ P H P L  +KPG++ + +  G  + I++S G + V   SSV +
Sbjct: 21  VQKIQVTGSEGELGVFPGHAPLLTAIKPGMVRIVKQHGEEEFIYLSGGILEVQ-PSSVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  +++         AS+E +KA A++ V
Sbjct: 80  LADTAIRGQDLDEARAMESKRKAEEHINNSHGDVDYAQASAELSKAIAKLRV 131


>gi|420367703|ref|ZP_14868480.1| ATP synthase F1, epsilon subunit [Shigella flexneri 1235-66]
 gi|391322925|gb|EIQ79596.1| ATP synthase F1, epsilon subunit [Shigella flexneri 1235-66]
          Length = 139

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 21  VEKIQVTGSEGELGIFPGHAPLLTAIKPGMIRIVKQFGHEEFIYLSGGILEVQ-PGNVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  + S         AS+E AKA A++ V
Sbjct: 80  LADTAIRGQDLDEARALEAKRKAEEHIKSSHGDVDYAQASAELAKAIAKLRV 131


>gi|86359450|ref|YP_471342.1| F0F1 ATP synthase subunit epsilon [Rhizobium etli CFN 42]
 gi|119367767|sp|Q2K3H1.1|ATPE_RHIEC RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|86283552|gb|ABC92615.1| ATP synthase protein, epsilon subunit [Rhizobium etli CFN 42]
          Length = 135

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 2/120 (1%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           AD  +F L S  ++  + + V +V VP+  G   ++ NH PT+  +KPGV++V    G  
Sbjct: 2   ADNFNFELVSPERLLLS-EMVTEVVVPATEGEMTVMANHAPTMTTIKPGVVSVRSASGKK 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           Q   V  G   +   +   ++AE A PV+ L        +  A+ EL  A     K+  +
Sbjct: 61  QDYVVFGGFADIL-PTGCTLLAESAVPVEELHKDELTRRIEAARKELEHAELHEHKSRLE 119


>gi|193237706|dbj|BAG50116.1| ATP synthase epsilon subunit [Takakia lepidozioides]
 gi|193237727|dbj|BAG50132.1| ATP synthase epsilon subunit [Takakia lepidozioides]
          Length = 138

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 64/127 (50%), Gaps = 7/127 (5%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           ++  + + N++ + N  V+++ + + SG  G+LPNH P L  L  G+I +     ++ + 
Sbjct: 3   LNLRVMAPNRIVW-NSEVQEIILSTNSGQIGVLPNHAPLLTALDIGIIKIR----LNGQW 57

Query: 81  FVSS--GTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 138
           F  +  G   + D++ + I+  EA     +D   A+D    A+ +L+ A       EA +
Sbjct: 58  FTMALMGGFAMIDNNRMTILVNEAEKAIEIDPREAQDTFQMARDKLAQAGGRKQVIEANL 117

Query: 139 AVEVAEA 145
           A + A+A
Sbjct: 118 AFKRAKA 124


>gi|163854648|ref|YP_001628946.1| ATP synthase F0F1 subunit epsilon [Bordetella petrii DSM 12804]
 gi|226740226|sp|A9HY45.1|ATPE_BORPD RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|163258376|emb|CAP40675.1| ATP synthase epsilon chain [Bordetella petrii]
          Length = 141

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 6/106 (5%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  +G  GILP H P ++ ++PG + +   +G  + IFV+ G + V     V ++
Sbjct: 21  KFVTLPGEAGELGILPGHTPLISRIRPGTVKIVRADGGEENIFVAGGILEVQ-PGMVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAE 144
           A+ A     LD + A     KA+  L +     AK +A IAV  AE
Sbjct: 80  ADTAIRAADLDEARAVAAREKAEEALRN-----AKDKADIAVVEAE 120


>gi|94676815|ref|YP_588609.1| ATP synthase F1, epsilon subunit [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|119361412|sp|Q1LTV5.1|ATPE_BAUCH RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|94219965|gb|ABF14124.1| ATP synthase F1, epsilon subunit [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 140

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 60/109 (55%), Gaps = 3/109 (2%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I +   +G ++ I++S G + V  +  V +
Sbjct: 22  VEKIQVTGIEGDLGIFPRHTPLLTQIKPGLIYLVTEDGKTEYIYISGGILEVQLN-IVTV 80

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           +A+ A   + LD   A +   +AQ  + + + + +  +A  +VE+A+AL
Sbjct: 81  LADTAIRGEDLDEKRAINSKLQAQENIKNLNYDMSYTQA--SVELAKAL 127


>gi|390939719|ref|YP_006403456.1| ATP synthase F1 subunit epsilon [Sulfurospirillum barnesii SES-3]
 gi|390192826|gb|AFL67881.1| ATP synthase, F1 epsilon subunit [Sulfurospirillum barnesii SES-3]
          Length = 131

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 2/116 (1%)

Query: 35  NQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSS 94
           + NVK V +P   G FG+LPNH   +A+L  GVI +   +G    + ++ G + V D++S
Sbjct: 17  DNNVKSVTLPGKEGEFGVLPNHASLVALLSAGVIDIELADGSHDVVAINWGHVKV-DENS 75

Query: 95  VQIIAEEAHPVDSLDASAARDVLSKAQSELSS-ASSETAKAEAQIAVEVAEALKIF 149
           V I+A+ A  +     S     L  A   L S   S+ A A A   +E    LK F
Sbjct: 76  VTILADGAVSIGGTTESEVAKSLEAATELLKSICDSDAAIAMATAKIESIRKLKKF 131


>gi|372000157|gb|AEX65155.1| F0F1 ATP synthase epsilon chain [Blossfeldia liliputana]
          Length = 133

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 3/124 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           ++  + + N++ Y N  VK++ +P+ SG  G+LPNH P    +  G++ +   +      
Sbjct: 3   LNLCVLAPNRIVY-NSEVKEIILPTSSGQIGVLPNHAPIATGVDIGIMRIRLND--QWLT 59

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
            V +G   +  ++ + +   EA     +D   A+  L KA++ L  A  +    EA +A+
Sbjct: 60  IVVTGLFAIICNNEITVFVTEAERGSDIDPQEAQQTLEKAEANLRKAEGKIPIIEANLAL 119

Query: 141 EVAE 144
            +A+
Sbjct: 120 RLAK 123


>gi|392552780|ref|ZP_10299917.1| ATP synthase, F1 sector subunit epsilon [Pseudoalteromonas spongiae
           UST010723-006]
          Length = 139

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 11/114 (9%)

Query: 37  NVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQ 96
            V+ + V    G  GIL  H P L  LKPG++   +  G  + I+++ GT+ V    +V 
Sbjct: 20  RVESLQVTGSEGELGILHGHAPLLTPLKPGMVNFVKQHGEEEMIYIAGGTLEVQ-PGTVT 78

Query: 97  IIAEEAHPVDSLDASAARDVLSKAQSELSSASS----------ETAKAEAQIAV 140
           ++A+ A   + LD + A +   +A+  +++AS+          E +KA AQI V
Sbjct: 79  VLADVATRAEDLDEATALEAKRQAEEHMANASAADFNYAEAAIELSKAIAQIKV 132


>gi|388568893|ref|ZP_10155302.1| F-ATPase subunit epsilon [Hydrogenophaga sp. PBC]
 gi|388263849|gb|EIK89430.1| F-ATPase subunit epsilon [Hydrogenophaga sp. PBC]
          Length = 138

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 18/114 (15%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGT-------ITVND 91
           K V +P  +G  GILP H+P +  +KPG + + + +G  + +FV+ G        ITV  
Sbjct: 21  KFVALPGEAGELGILPGHIPLITRIKPGAVRIEKADGGEEFVFVAGGILEVQPNAITVLS 80

Query: 92  DSSVQIIAEEAHPVDSLDASAAR----DVLSKAQS--ELSSASSETAKAEAQIA 139
           D++++        +D   AS+AR    + +  A++  +L+ A+SE A   AQIA
Sbjct: 81  DTAIR-----GKDLDEAKASSARQQAEEAVKNAKTDIDLAKATSELAVMAAQIA 129


>gi|348589508|ref|YP_004873970.1| ATP synthase subunit epsilon [Taylorella asinigenitalis MCE3]
 gi|347973412|gb|AEP35947.1| ATP synthase epsilon chain [Taylorella asinigenitalis MCE3]
 gi|399116711|emb|CCG19519.1| ATP synthase epsilon chain [Taylorella asinigenitalis 14/45]
          Length = 142

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 1/91 (1%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  +G  G+LP H P ++ +KPG + +   +G  + +FV+ G + V    +V ++
Sbjct: 23  KMVVLPGVTGELGVLPGHTPLISRVKPGRVKITREDGSEETLFVAGGLLEVQ-PFAVTVL 81

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASS 129
           A+    ++ LD   A +   KA+     A+S
Sbjct: 82  ADTVVRMEDLDEQKALEARKKAEESRKKATS 112


>gi|212703957|ref|ZP_03312085.1| hypothetical protein DESPIG_02010 [Desulfovibrio piger ATCC 29098]
 gi|212672660|gb|EEB33143.1| ATP synthase F1, epsilon subunit [Desulfovibrio piger ATCC 29098]
          Length = 133

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 2/101 (1%)

Query: 43  VPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEA 102
            P   G FG+LP+HV  L+ LK G +  Y   G    +F+S G   VN+   + ++AE A
Sbjct: 25  CPGVMGEFGVLPHHVSLLSALKIGNLR-YTEGGKQHNVFISGGFADVNN-KVLTVLAESA 82

Query: 103 HPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
              + +D + A+    +A+  L+S + +   A A+ A++ A
Sbjct: 83  ELAEDIDTARAQAAKERAEKRLASQADDVDHARAEAALQRA 123


>gi|167747403|ref|ZP_02419530.1| hypothetical protein ANACAC_02123 [Anaerostipes caccae DSM 14662]
 gi|317471134|ref|ZP_07930505.1| ATP synthase F1 [Anaerostipes sp. 3_2_56FAA]
 gi|167652765|gb|EDR96894.1| ATP synthase F1, epsilon subunit [Anaerostipes caccae DSM 14662]
 gi|316901349|gb|EFV23292.1| ATP synthase F1 [Anaerostipes sp. 3_2_56FAA]
          Length = 135

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 2/108 (1%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           M   + + ++ FY  + V+  +  +  G  GI P H+P   I+ PG++T+ E++G  ++ 
Sbjct: 6   MKLEVTTPDRSFYAGE-VRMAEFTTTEGNVGIYPKHIPMTMIIAPGILTITESDGTKKQA 64

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS 128
            +  G + +  + +V I+AE A     +D         +AQ  L   S
Sbjct: 65  ALMKGFVEITKE-AVNILAEVAEWPGEIDLERVERAKRRAQERLKHKS 111


>gi|422348902|ref|ZP_16429794.1| ATP synthase F1, epsilon subunit [Sutterella wadsworthensis
           2_1_59BFAA]
 gi|404658954|gb|EKB31816.1| ATP synthase F1, epsilon subunit [Sutterella wadsworthensis
           2_1_59BFAA]
          Length = 139

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 52/91 (57%), Gaps = 2/91 (2%)

Query: 41  VDVPSFSGAFGILPNHVPTLAILKPGVITVY-ETEGVSQKIFVSSGTITVNDDSSVQIIA 99
           V +P  SG  GILP HVP + +++PG + ++   +   +++FV+ G + V  D  V ++A
Sbjct: 23  VSLPGKSGELGILPGHVPLITLIRPGFVRIHLPGKKEVEQVFVAGGVLEVQPD-LVTVLA 81

Query: 100 EEAHPVDSLDASAARDVLSKAQSELSSASSE 130
           + A   + LD + A   L  A+++  +A+ E
Sbjct: 82  DTAVRSNDLDEAKAAKALEDARAQRQNATGE 112


>gi|398377033|ref|ZP_10535212.1| ATP synthase, F1 epsilon subunit [Rhizobium sp. AP16]
 gi|397727234|gb|EJK87661.1| ATP synthase, F1 epsilon subunit [Rhizobium sp. AP16]
          Length = 135

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 2/120 (1%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           AD  +F L S  ++  + Q V  V +P+  G   ++ +H PT+  +KPGV+ V+   G  
Sbjct: 2   ADNFNFELVSPERLLLSEQ-VIDVVIPASEGEMTVMAHHAPTMTTIKPGVVKVHSASGKK 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           Q   V  G   +   +   ++AE A PV+ L+       ++ A++EL  A     K+  +
Sbjct: 61  QDYVVFGGFADIL-PTGCTLLAESAIPVEDLNQDELTRRINVAKAELEDAEHHEHKSRLE 119


>gi|153941350|ref|YP_001389520.1| F0F1 ATP synthase subunit epsilon [Clostridium botulinum F str.
           Langeland]
 gi|384460603|ref|YP_005673198.1| ATP synthase F1 subunit epsilon [Clostridium botulinum F str.
           230613]
 gi|166222451|sp|A7G9R0.1|ATPE_CLOBL RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|152937246|gb|ABS42744.1| ATP synthase F1, epsilon subunit [Clostridium botulinum F str.
           Langeland]
 gi|295317620|gb|ADF97997.1| ATP synthase F1, epsilon subunit [Clostridium botulinum F str.
           230613]
          Length = 133

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 1/91 (1%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           +K+V      G   ILPNHV  +  LKP +    +  G    IF SSG + V +D+ V I
Sbjct: 21  IKEVITEGLDGDLAILPNHVNMITYLKPTITKYIDLNGNKNNIFTSSGVLKV-EDNKVYI 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSSAS 128
           I + +   + +D   A +   +A+  L +  
Sbjct: 80  ICDASEKPEDIDIKRAENAKKRAEERLRNKK 110


>gi|15925092|ref|NP_372626.1| ATP synthase F0F1 subunit epsilon [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|15927676|ref|NP_375209.1| ATP synthase F0F1 subunit epsilon [Staphylococcus aureus subsp.
           aureus N315]
 gi|21283755|ref|NP_646843.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus MW2]
 gi|49484326|ref|YP_041550.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|49486895|ref|YP_044116.1| ATP synthase F0F1 subunit epsilon [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|57652124|ref|YP_186909.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus COL]
 gi|82751703|ref|YP_417444.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus RF122]
 gi|87160314|ref|YP_494703.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88196006|ref|YP_500819.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|148268553|ref|YP_001247496.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150394617|ref|YP_001317292.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus JH1]
 gi|151222218|ref|YP_001333040.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus str. Newman]
 gi|156980417|ref|YP_001442676.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus Mu3]
 gi|161510309|ref|YP_001575968.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|221141621|ref|ZP_03566114.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus str. JKD6009]
 gi|253315770|ref|ZP_04838983.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|253731060|ref|ZP_04865225.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253733064|ref|ZP_04867229.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|255006890|ref|ZP_05145491.2| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257426241|ref|ZP_05602656.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257428899|ref|ZP_05605293.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257431508|ref|ZP_05607881.1| predicted protein [Staphylococcus aureus subsp. aureus 68-397]
 gi|257434217|ref|ZP_05610567.1| predicted protein [Staphylococcus aureus subsp. aureus E1410]
 gi|257437130|ref|ZP_05613170.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus M876]
 gi|257793860|ref|ZP_05642839.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A9781]
 gi|258407028|ref|ZP_05680178.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A9763]
 gi|258422050|ref|ZP_05684967.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A9719]
 gi|258422898|ref|ZP_05685798.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A9635]
 gi|258433581|ref|ZP_05688654.1| predicted protein [Staphylococcus aureus A9299]
 gi|258440476|ref|ZP_05690646.1| predicted protein [Staphylococcus aureus A8115]
 gi|258445684|ref|ZP_05693862.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A6300]
 gi|258450138|ref|ZP_05698233.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A6224]
 gi|258453188|ref|ZP_05701179.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A5948]
 gi|258453407|ref|ZP_05701389.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A5937]
 gi|262049269|ref|ZP_06022144.1| FoF1-ATP synthase epsilon subunit [Staphylococcus aureus D30]
 gi|262052605|ref|ZP_06024799.1| FoF1-ATP synthase epsilon subunit [Staphylococcus aureus 930918-3]
 gi|269203738|ref|YP_003283007.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus ED98]
 gi|282894746|ref|ZP_06302972.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A8117]
 gi|282904771|ref|ZP_06312645.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus C160]
 gi|282906446|ref|ZP_06314297.1| ATP synthase F1 epsilon subunit [Staphylococcus aureus subsp.
           aureus Btn1260]
 gi|282909415|ref|ZP_06317230.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus WW2703/97]
 gi|282911667|ref|ZP_06319466.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282914951|ref|ZP_06322731.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus M899]
 gi|282917451|ref|ZP_06325204.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus D139]
 gi|282920280|ref|ZP_06328004.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus C427]
 gi|282923090|ref|ZP_06330775.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A9765]
 gi|282925491|ref|ZP_06333145.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus C101]
 gi|282929026|ref|ZP_06336611.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A10102]
 gi|283771270|ref|ZP_06344159.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           H19]
 gi|283958882|ref|ZP_06376327.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus A017934/97]
 gi|284025136|ref|ZP_06379534.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus 132]
 gi|293509019|ref|ZP_06667806.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|293510934|ref|ZP_06669633.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus M809]
 gi|293547536|ref|ZP_06672211.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus M1015]
 gi|294850072|ref|ZP_06790809.1| ATP synthase F1 [Staphylococcus aureus A9754]
 gi|295407032|ref|ZP_06816834.1| ATP synthase F1 [Staphylococcus aureus A8819]
 gi|295428689|ref|ZP_06821315.1| ATP synthase F1 [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|296275419|ref|ZP_06857926.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297210077|ref|ZP_06926470.1| ATP synthase F1 sector epsilon subunit [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|297246031|ref|ZP_06929888.1| ATP synthase F1 [Staphylococcus aureus A8796]
 gi|297589831|ref|ZP_06948471.1| ATP synthase F1 sector epsilon subunit [Staphylococcus aureus
           subsp. aureus MN8]
 gi|300910440|ref|ZP_07127892.1| ATP synthase F1 sector epsilon subunit [Staphylococcus aureus
           subsp. aureus TCH70]
 gi|304379283|ref|ZP_07362022.1| ATP synthase F1 sector epsilon subunit [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|379015228|ref|YP_005291464.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus VC40]
 gi|379021778|ref|YP_005298440.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           M013]
 gi|384548327|ref|YP_005737580.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           ED133]
 gi|384550899|ref|YP_005740151.1| ATP synthase epsilon chain, AtpE [Staphylococcus aureus subsp.
           aureus JKD6159]
 gi|384862754|ref|YP_005745474.1| ATP synthase epsilon chain, AtpE [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|384865287|ref|YP_005750646.1| ATP synthase F1 subunit epsilon [Staphylococcus aureus subsp.
           aureus ECT-R 2]
 gi|384866975|ref|YP_005747171.1| ATP synthase F1 sector epsilon subunit [Staphylococcus aureus
           subsp. aureus TCH60]
 gi|385782342|ref|YP_005758513.1| ATP synthase F1 subunit epsilon [Staphylococcus aureus subsp.
           aureus 11819-97]
 gi|386729792|ref|YP_006196175.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           71193]
 gi|386831684|ref|YP_006238338.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           HO 5096 0412]
 gi|387143817|ref|YP_005732211.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           TW20]
 gi|387151227|ref|YP_005742791.1| ATP synthase epsilon chain [Staphylococcus aureus 04-02981]
 gi|387603381|ref|YP_005734902.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus ST398]
 gi|387781080|ref|YP_005755878.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           LGA251]
 gi|404479383|ref|YP_006710813.1| ATP synthase subunit epsilon [Staphylococcus aureus 08BA02176]
 gi|415684928|ref|ZP_11449957.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus CGS00]
 gi|415688378|ref|ZP_11452093.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus CGS01]
 gi|415694085|ref|ZP_11455665.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|416841485|ref|ZP_11904440.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus O11]
 gi|416847162|ref|ZP_11906971.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus O46]
 gi|417650353|ref|ZP_12300125.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21189]
 gi|417651637|ref|ZP_12301397.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21172]
 gi|417655308|ref|ZP_12305021.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21193]
 gi|417795523|ref|ZP_12442743.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21305]
 gi|417799461|ref|ZP_12446601.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21310]
 gi|417802279|ref|ZP_12449344.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21318]
 gi|417887790|ref|ZP_12531910.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21195]
 gi|417891556|ref|ZP_12535618.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21200]
 gi|417893616|ref|ZP_12537641.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21201]
 gi|417897455|ref|ZP_12541386.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21235]
 gi|417898326|ref|ZP_12542247.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21259]
 gi|417900307|ref|ZP_12544197.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21266]
 gi|417905625|ref|ZP_12549433.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21269]
 gi|418277215|ref|ZP_12891829.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21178]
 gi|418283312|ref|ZP_12896063.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21202]
 gi|418286717|ref|ZP_12899358.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21209]
 gi|418308992|ref|ZP_12920572.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21194]
 gi|418311386|ref|ZP_12922911.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21331]
 gi|418314020|ref|ZP_12925502.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21334]
 gi|418315840|ref|ZP_12927292.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21340]
 gi|418319277|ref|ZP_12930661.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21232]
 gi|418320103|ref|ZP_12931467.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus VCU006]
 gi|418425271|ref|ZP_12998365.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           VRS1]
 gi|418428163|ref|ZP_13001152.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           VRS2]
 gi|418431049|ref|ZP_13003950.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           VRS3a]
 gi|418434955|ref|ZP_13006806.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           VRS4]
 gi|418437722|ref|ZP_13009499.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           VRS5]
 gi|418440650|ref|ZP_13012337.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           VRS6]
 gi|418443626|ref|ZP_13015212.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           VRS7]
 gi|418446622|ref|ZP_13018084.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           VRS8]
 gi|418449708|ref|ZP_13021080.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           VRS9]
 gi|418452548|ref|ZP_13023870.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           VRS10]
 gi|418455503|ref|ZP_13026754.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           VRS11a]
 gi|418458379|ref|ZP_13029570.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           VRS11b]
 gi|418560771|ref|ZP_13125280.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21252]
 gi|418562023|ref|ZP_13126492.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21262]
 gi|418565040|ref|ZP_13129460.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21264]
 gi|418568181|ref|ZP_13132532.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21272]
 gi|418569973|ref|ZP_13134275.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21283]
 gi|418572711|ref|ZP_13136917.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21333]
 gi|418580025|ref|ZP_13144115.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1114]
 gi|418582921|ref|ZP_13146994.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1605]
 gi|418597009|ref|ZP_13160546.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21342]
 gi|418599097|ref|ZP_13162593.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21343]
 gi|418602190|ref|ZP_13165602.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21345]
 gi|418638742|ref|ZP_13201025.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-3]
 gi|418641095|ref|ZP_13203309.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-24]
 gi|418645481|ref|ZP_13207603.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-55]
 gi|418646561|ref|ZP_13208663.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-88]
 gi|418649171|ref|ZP_13211201.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-91]
 gi|418651992|ref|ZP_13213972.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-99]
 gi|418655893|ref|ZP_13217725.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-105]
 gi|418658689|ref|ZP_13220402.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-111]
 gi|418663235|ref|ZP_13224757.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-122]
 gi|418871159|ref|ZP_13425546.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-125]
 gi|418875966|ref|ZP_13430215.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIGC93]
 gi|418878959|ref|ZP_13433190.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1165]
 gi|418881797|ref|ZP_13436009.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1213]
 gi|418884428|ref|ZP_13438618.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1769]
 gi|418887132|ref|ZP_13441275.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1150]
 gi|418889908|ref|ZP_13444036.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1524]
 gi|418892617|ref|ZP_13446727.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1176]
 gi|418895697|ref|ZP_13449788.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1057]
 gi|418898689|ref|ZP_13452756.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIGC341D]
 gi|418901490|ref|ZP_13455541.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1214]
 gi|418904441|ref|ZP_13458478.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1770]
 gi|418907034|ref|ZP_13461055.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIGC345D]
 gi|418909928|ref|ZP_13463918.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG149]
 gi|418912652|ref|ZP_13466629.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG547]
 gi|418915233|ref|ZP_13469200.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIGC340D]
 gi|418918149|ref|ZP_13472102.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1267]
 gi|418920931|ref|ZP_13474859.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIGC348]
 gi|418923817|ref|ZP_13477728.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1233]
 gi|418926515|ref|ZP_13480411.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG2018]
 gi|418929445|ref|ZP_13483329.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1612]
 gi|418932420|ref|ZP_13486248.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1750]
 gi|418935083|ref|ZP_13488899.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIGC128]
 gi|418947899|ref|ZP_13500238.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-157]
 gi|418952191|ref|ZP_13504230.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-160]
 gi|418955747|ref|ZP_13507683.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-189]
 gi|418979381|ref|ZP_13527177.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           DR10]
 gi|418983049|ref|ZP_13530753.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1242]
 gi|418986672|ref|ZP_13534352.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1500]
 gi|418989169|ref|ZP_13536837.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1835]
 gi|418992019|ref|ZP_13539677.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1096]
 gi|418994800|ref|ZP_13542433.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG290]
 gi|419774743|ref|ZP_14300700.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CO-23]
 gi|419783625|ref|ZP_14309409.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-M]
 gi|421150930|ref|ZP_15610581.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus str. Newbould 305]
 gi|422742990|ref|ZP_16796986.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus MRSA177]
 gi|422745951|ref|ZP_16799886.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus MRSA131]
 gi|424771961|ref|ZP_18199077.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CM05]
 gi|440707626|ref|ZP_20888317.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21282]
 gi|440735464|ref|ZP_20915069.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus DSM 20231]
 gi|443636427|ref|ZP_21120537.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21236]
 gi|443638716|ref|ZP_21122750.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21196]
 gi|448742199|ref|ZP_21724151.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus KT/314250]
 gi|448745231|ref|ZP_21727094.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus KT/Y21]
 gi|54036778|sp|P63665.1|ATPE_STAAN RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|54036779|sp|P63666.1|ATPE_STAAW RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|54040848|sp|P63664.1|ATPE_STAAM RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|60389599|sp|Q6G7K8.1|ATPE_STAAS RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|60389624|sp|Q6GEX3.1|ATPE_STAAR RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|81694062|sp|Q5HE98.1|ATPE_STAAC RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|119367789|sp|Q2FF25.1|ATPE_STAA3 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|119367790|sp|Q2FWF1.1|ATPE_STAA8 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|119367791|sp|Q2YUK2.1|ATPE_STAAB RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|166222499|sp|A7X4U2.1|ATPE_STAA1 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|172048984|sp|A6QIU6.1|ATPE_STAAE RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|189081381|sp|A6U3I7.1|ATPE_STAA2 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|189081382|sp|A5IUP7.1|ATPE_STAA9 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|189081383|sp|A8Z500.1|ATPE_STAAT RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|13701896|dbj|BAB43188.1| FoF1-ATP synthase epsilon subunit [Staphylococcus aureus subsp.
           aureus N315]
 gi|14247875|dbj|BAB58264.1| FoF1-ATP synthase epsilon subunit [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|21205197|dbj|BAB95891.1| FoF1-ATP synthase epsilon subunit [Staphylococcus aureus subsp.
           aureus MW2]
 gi|49242455|emb|CAG41171.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49245338|emb|CAG43813.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57286310|gb|AAW38404.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus COL]
 gi|82657234|emb|CAI81675.1| ATP synthase epsilon chain [Staphylococcus aureus RF122]
 gi|87126288|gb|ABD20802.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|87203564|gb|ABD31374.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|147741622|gb|ABQ49920.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus JH9]
 gi|149947069|gb|ABR53005.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus JH1]
 gi|150375018|dbj|BAF68278.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus str. Newman]
 gi|156722552|dbj|BAF78969.1| FoF1-ATP synthase epsilon subunit [Staphylococcus aureus subsp.
           aureus Mu3]
 gi|160369118|gb|ABX30089.1| F-ATPase superfamily proton( H+)- or sodium (Na+)-translocating
           F-type ATPase epsilon subunit [Staphylococcus aureus
           subsp. aureus USA300_TCH1516]
 gi|253725187|gb|EES93916.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253728972|gb|EES97701.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|257270946|gb|EEV03119.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257274241|gb|EEV05758.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257277749|gb|EEV08419.1| predicted protein [Staphylococcus aureus subsp. aureus 68-397]
 gi|257280856|gb|EEV11001.1| predicted protein [Staphylococcus aureus subsp. aureus E1410]
 gi|257283523|gb|EEV13650.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus M876]
 gi|257787832|gb|EEV26172.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A9781]
 gi|257841361|gb|EEV65805.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A9763]
 gi|257841950|gb|EEV66382.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A9719]
 gi|257846922|gb|EEV70936.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A9635]
 gi|257849312|gb|EEV73291.1| predicted protein [Staphylococcus aureus A9299]
 gi|257852545|gb|EEV76463.1| predicted protein [Staphylococcus aureus A8115]
 gi|257855523|gb|EEV78460.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A6300]
 gi|257856612|gb|EEV79518.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A6224]
 gi|257859134|gb|EEV81991.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A5948]
 gi|257864388|gb|EEV87134.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A5937]
 gi|259159475|gb|EEW44525.1| FoF1-ATP synthase epsilon subunit [Staphylococcus aureus 930918-3]
 gi|259162634|gb|EEW47201.1| FoF1-ATP synthase epsilon subunit [Staphylococcus aureus D30]
 gi|262076028|gb|ACY12001.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus ED98]
 gi|269941701|emb|CBI50108.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           TW20]
 gi|282312892|gb|EFB43293.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus C101]
 gi|282316140|gb|EFB46521.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus C427]
 gi|282318653|gb|EFB49010.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus D139]
 gi|282321154|gb|EFB51485.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus M899]
 gi|282324432|gb|EFB54745.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282326685|gb|EFB56983.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus WW2703/97]
 gi|282330396|gb|EFB59914.1| ATP synthase F1 epsilon subunit [Staphylococcus aureus subsp.
           aureus Btn1260]
 gi|282589332|gb|EFB94424.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A10102]
 gi|282593281|gb|EFB98278.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A9765]
 gi|282594804|gb|EFB99781.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus C160]
 gi|282762834|gb|EFC02968.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A8117]
 gi|283459475|gb|EFC06568.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           H19]
 gi|283471319|emb|CAQ50530.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus ST398]
 gi|283789600|gb|EFC28423.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus A017934/97]
 gi|285817766|gb|ADC38253.1| ATP synthase epsilon chain [Staphylococcus aureus 04-02981]
 gi|290919656|gb|EFD96729.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus M1015]
 gi|291094723|gb|EFE24995.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|291466219|gb|EFF08746.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus M809]
 gi|294823020|gb|EFG39452.1| ATP synthase F1 [Staphylococcus aureus A9754]
 gi|294968057|gb|EFG44084.1| ATP synthase F1 [Staphylococcus aureus A8819]
 gi|295127359|gb|EFG56999.1| ATP synthase F1 [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|296885277|gb|EFH24217.1| ATP synthase F1 sector epsilon subunit [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|297177030|gb|EFH36285.1| ATP synthase F1 [Staphylococcus aureus A8796]
 gi|297576959|gb|EFH95673.1| ATP synthase F1 sector epsilon subunit [Staphylococcus aureus
           subsp. aureus MN8]
 gi|298695376|gb|ADI98598.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           ED133]
 gi|300888282|gb|EFK83473.1| ATP synthase F1 sector epsilon subunit [Staphylococcus aureus
           subsp. aureus TCH70]
 gi|302333748|gb|ADL23941.1| ATP synthase epsilon chain, AtpE [Staphylococcus aureus subsp.
           aureus JKD6159]
 gi|302751983|gb|ADL66160.1| ATP synthase epsilon chain, AtpE [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|304342142|gb|EFM08042.1| ATP synthase F1 sector epsilon subunit [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|312437480|gb|ADQ76551.1| ATP synthase F1 sector epsilon subunit [Staphylococcus aureus
           subsp. aureus TCH60]
 gi|312830454|emb|CBX35296.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus ECT-R 2]
 gi|315128773|gb|EFT84773.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|315193267|gb|EFU23665.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus CGS00]
 gi|315196964|gb|EFU27306.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus CGS01]
 gi|320140726|gb|EFW32578.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus MRSA131]
 gi|320143702|gb|EFW35479.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus MRSA177]
 gi|323439349|gb|EGA97073.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus O11]
 gi|323442442|gb|EGB00071.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus O46]
 gi|329724006|gb|EGG60530.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21189]
 gi|329726379|gb|EGG62847.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21172]
 gi|329729260|gb|EGG65668.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21193]
 gi|334270883|gb|EGL89279.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21305]
 gi|334273792|gb|EGL92131.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21310]
 gi|334275024|gb|EGL93326.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21318]
 gi|341839553|gb|EGS81133.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21235]
 gi|341843088|gb|EGS84320.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21269]
 gi|341848686|gb|EGS89846.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21259]
 gi|341848987|gb|EGS90142.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21266]
 gi|341851973|gb|EGS92875.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21200]
 gi|341854012|gb|EGS94886.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21201]
 gi|341857138|gb|EGS97961.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21195]
 gi|344178182|emb|CCC88668.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           LGA251]
 gi|359831087|gb|AEV79065.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           M013]
 gi|364523331|gb|AEW66081.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 11819-97]
 gi|365165930|gb|EHM57678.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21209]
 gi|365167960|gb|EHM59327.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21202]
 gi|365173693|gb|EHM64179.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21178]
 gi|365228419|gb|EHM69603.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus VCU006]
 gi|365234517|gb|EHM75449.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21331]
 gi|365234634|gb|EHM75564.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21334]
 gi|365235994|gb|EHM76899.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21194]
 gi|365241014|gb|EHM81771.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21232]
 gi|365242428|gb|EHM83135.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21340]
 gi|371971193|gb|EHO88600.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21252]
 gi|371974861|gb|EHO92176.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21262]
 gi|371975194|gb|EHO92493.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21264]
 gi|371980449|gb|EHO97657.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21272]
 gi|371984055|gb|EHP01182.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21333]
 gi|371985178|gb|EHP02263.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21283]
 gi|374363925|gb|AEZ38030.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus VC40]
 gi|374395794|gb|EHQ67050.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21342]
 gi|374396744|gb|EHQ67970.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21345]
 gi|374398147|gb|EHQ69337.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21343]
 gi|375019858|gb|EHS13408.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-24]
 gi|375020743|gb|EHS14259.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-3]
 gi|375023000|gb|EHS16466.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-55]
 gi|375023074|gb|EHS16538.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-99]
 gi|375030430|gb|EHS23747.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-91]
 gi|375032718|gb|EHS25944.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-88]
 gi|375034497|gb|EHS27658.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-122]
 gi|375035279|gb|EHS28409.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-105]
 gi|375037820|gb|EHS30828.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-111]
 gi|375369093|gb|EHS72984.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-125]
 gi|375369555|gb|EHS73429.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-160]
 gi|375370472|gb|EHS74277.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-189]
 gi|375374081|gb|EHS77725.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-157]
 gi|377692872|gb|EHT17251.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1165]
 gi|377692995|gb|EHT17372.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1057]
 gi|377693364|gb|EHT17736.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1114]
 gi|377700726|gb|EHT25060.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1214]
 gi|377702569|gb|EHT26890.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1500]
 gi|377702676|gb|EHT26996.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1242]
 gi|377709155|gb|EHT33426.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1605]
 gi|377711502|gb|EHT35733.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1750]
 gi|377713261|gb|EHT37470.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1769]
 gi|377715697|gb|EHT39884.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1835]
 gi|377721159|gb|EHT45300.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG547]
 gi|377721427|gb|EHT45559.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1096]
 gi|377723861|gb|EHT47982.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1150]
 gi|377729620|gb|EHT53710.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1176]
 gi|377729793|gb|EHT53876.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1213]
 gi|377732006|gb|EHT56058.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1233]
 gi|377736637|gb|EHT60652.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1612]
 gi|377739877|gb|EHT63877.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1770]
 gi|377741366|gb|EHT65355.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG2018]
 gi|377741733|gb|EHT65719.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG290]
 gi|377748417|gb|EHT72374.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1267]
 gi|377749891|gb|EHT73830.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG149]
 gi|377751225|gb|EHT75158.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1524]
 gi|377754676|gb|EHT78583.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIGC340D]
 gi|377758248|gb|EHT82134.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIGC341D]
 gi|377761490|gb|EHT85361.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIGC345D]
 gi|377762476|gb|EHT86339.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIGC348]
 gi|377768392|gb|EHT92175.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIGC93]
 gi|377769185|gb|EHT92961.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIGC128]
 gi|379992812|gb|EIA14262.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           DR10]
 gi|383364922|gb|EID42227.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-M]
 gi|383971411|gb|EID87486.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CO-23]
 gi|384231085|gb|AFH70332.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           71193]
 gi|385197076|emb|CCG16721.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus HO
           5096 0412]
 gi|387716312|gb|EIK04371.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           VRS2]
 gi|387716722|gb|EIK04771.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           VRS3a]
 gi|387717067|gb|EIK05093.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           VRS1]
 gi|387723778|gb|EIK11494.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           VRS4]
 gi|387725349|gb|EIK12967.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           VRS5]
 gi|387728609|gb|EIK16093.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           VRS6]
 gi|387733408|gb|EIK20592.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           VRS8]
 gi|387734798|gb|EIK21950.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           VRS7]
 gi|387735089|gb|EIK22228.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           VRS9]
 gi|387742394|gb|EIK29212.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           VRS10]
 gi|387743030|gb|EIK29829.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           VRS11a]
 gi|387744174|gb|EIK30945.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           VRS11b]
 gi|394329014|gb|EJE55141.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus str. Newbould 305]
 gi|402347548|gb|EJU82575.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CM05]
 gi|404440872|gb|AFR74065.1| ATP synthase epsilon chain [Staphylococcus aureus 08BA02176]
 gi|436430572|gb|ELP27932.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus DSM 20231]
 gi|436505802|gb|ELP41672.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21282]
 gi|443407806|gb|ELS66344.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21236]
 gi|443408752|gb|ELS67267.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21196]
 gi|445547070|gb|ELY15344.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus KT/314250]
 gi|445561502|gb|ELY17704.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus KT/Y21]
          Length = 134

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           ++  + + N   Y   NV+ V + + +G  G++  H+PT+A LK G + V   +G ++ I
Sbjct: 4   LNLDIVTPNGSVYNRDNVELVVMQTTAGEIGVMSGHIPTVAALKTGFVKVKFHDG-TEYI 62

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
            VS G + V  D  V II + A     +D   A+   ++A+S L +    T    A+ A+
Sbjct: 63  AVSDGFVEVRKD-KVSIIVQTAETAREIDVERAKLAKARAESHLENDDDNTDIHRAERAL 121

Query: 141 EVA 143
           E A
Sbjct: 122 ERA 124


>gi|365847392|ref|ZP_09387881.1| ATP synthase F1, epsilon subunit [Yokenella regensburgei ATCC
           43003]
 gi|364572646|gb|EHM50186.1| ATP synthase F1, epsilon subunit [Yokenella regensburgei ATCC
           43003]
          Length = 139

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    SV +
Sbjct: 21  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQFGHEEFIYLSGGILEVQ-PGSVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  + S         AS+E AKA A++ V
Sbjct: 80  LADTAIRGQDLDEARALESKRKAEEHIKSSHGDVDYAQASAELAKAIAKLRV 131


>gi|46447301|ref|YP_008666.1| H+-transporting two-sector ATPase (epsilon chain, atpC) [Candidatus
           Protochlamydia amoebophila UWE25]
 gi|81697607|sp|Q6MAK8.1|ATPE_PARUW RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|46400942|emb|CAF24391.1| putative H+-transporting two-sector ATPase (epsilon chain, atpC)
           [Candidatus Protochlamydia amoebophila UWE25]
          Length = 147

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 69/129 (53%), Gaps = 8/129 (6%)

Query: 25  LASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIF--V 82
           L S   VF  N++V  V+VP   G F +L +H   +A+L+PG +T+   +   QK++  +
Sbjct: 8   LTSEKNVF--NEDVYSVNVPGADGYFEVLAHHATVIALLQPGKLTIINKD--HQKLYFGI 63

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEV 142
           ++G I V+ +S+  IIA+    V  +D   A+    +A+  L S      K  A+ ++  
Sbjct: 64  TTGFIEVSHNSAT-IIADAIESVQEIDVERAKQSYERAKMRLESPDKHVDKERAKRSLNR 122

Query: 143 AE-ALKIFV 150
           A+  +K+F+
Sbjct: 123 AKNRIKLFL 131


>gi|168177490|ref|ZP_02612154.1| ATP synthase F1, epsilon subunit [Clostridium botulinum NCTC 2916]
 gi|168182233|ref|ZP_02616897.1| ATP synthase F1, epsilon subunit [Clostridium botulinum Bf]
 gi|170757042|ref|YP_001779785.1| ATP synthase F0F1 subunit epsilon [Clostridium botulinum B1 str.
           Okra]
 gi|170758312|ref|YP_001785486.1| ATP synthase F0F1 subunit epsilon [Clostridium botulinum A3 str.
           Loch Maree]
 gi|226947381|ref|YP_002802472.1| F0F1 ATP synthase subunit epsilon [Clostridium botulinum A2 str.
           Kyoto]
 gi|237793476|ref|YP_002861028.1| F0F1 ATP synthase subunit epsilon [Clostridium botulinum Ba4 str.
           657]
 gi|387816386|ref|YP_005676730.1| ATP synthase subunit epsilon [Clostridium botulinum H04402 065]
 gi|429247111|ref|ZP_19210387.1| F0F1 ATP synthase subunit epsilon [Clostridium botulinum
           CFSAN001628]
 gi|226740237|sp|B1IE35.1|ATPE_CLOBK RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|226740238|sp|B1KSS9.1|ATPE_CLOBM RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|254809355|sp|C1FQP6.1|ATPE_CLOBJ RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|259585477|sp|C3KYJ4.1|ATPE_CLOB6 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|169122254|gb|ACA46090.1| ATP synthase F1, epsilon subunit [Clostridium botulinum B1 str.
           Okra]
 gi|169405301|gb|ACA53712.1| ATP synthase F1, epsilon subunit [Clostridium botulinum A3 str.
           Loch Maree]
 gi|182670640|gb|EDT82614.1| ATP synthase F1, epsilon subunit [Clostridium botulinum NCTC 2916]
 gi|182674588|gb|EDT86549.1| ATP synthase F1, epsilon subunit [Clostridium botulinum Bf]
 gi|226841268|gb|ACO83934.1| ATP synthase F1, epsilon subunit [Clostridium botulinum A2 str.
           Kyoto]
 gi|229261739|gb|ACQ52772.1| ATP synthase F1, epsilon subunit [Clostridium botulinum Ba4 str.
           657]
 gi|322804427|emb|CBZ01977.1| ATP synthase epsilon chain [Clostridium botulinum H04402 065]
 gi|428755964|gb|EKX78559.1| F0F1 ATP synthase subunit epsilon [Clostridium botulinum
           CFSAN001628]
          Length = 133

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 2/110 (1%)

Query: 19  DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQ 78
           D ++ T+ +  K     + +K+V      G   ILPNHV  +  LKP +    +  G   
Sbjct: 3   DNIELTIFTPEKNIKIGE-IKEVITEGLDGDLAILPNHVNMITYLKPTITKYIDLNGNKN 61

Query: 79  KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS 128
            IF SSG + V +D+ V II + +   + +D   A +   +A+  L +  
Sbjct: 62  NIFTSSGVLKV-EDNKVYIICDASEKPEDIDIKRAENAKKRAEERLRNKK 110


>gi|440509595|ref|YP_007347031.1| ATP synthase epsilon chain [Candidatus Blochmannia chromaiodes str.
           640]
 gi|440453808|gb|AGC03300.1| ATP synthase epsilon chain [Candidatus Blochmannia chromaiodes str.
           640]
          Length = 144

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 1/89 (1%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  G+ P H P L  +KPGV+ + ++    + I++S G + V  +  V I
Sbjct: 22  VRKIQVTGIEGEMGVFPGHTPLLTSIKPGVLRIVKSHDNEEYIYISGGILEVQRN-IVTI 80

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS 126
           +A+ A   + LD   AR+   +A+  + +
Sbjct: 81  LADTAIRAEELDEKKAREAKHEAEKHIKN 109


>gi|414154212|ref|ZP_11410532.1| ATP synthase epsilon chain [Desulfotomaculum hydrothermale Lam5 =
           DSM 18033]
 gi|411454397|emb|CCO08436.1| ATP synthase epsilon chain [Desulfotomaculum hydrothermale Lam5 =
           DSM 18033]
          Length = 132

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 2/100 (2%)

Query: 44  PSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAH 103
           P   G  GILP H P +  LK GV+ + +  G   K+ VS G + V  +S V ++A+ A 
Sbjct: 27  PGADGELGILPEHAPLVTALKIGVLRIQQG-GKFFKVAVSGGFMEVK-NSRVVVLADTAE 84

Query: 104 PVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
             D +D   AR    +A+  L++ S +   A A++A++ A
Sbjct: 85  RADQIDVERARAAKQRAEQRLTAKSPDIDVARAEVALQKA 124


>gi|377577823|ref|ZP_09806804.1| ATP synthase subunit epsilon [Escherichia hermannii NBRC 105704]
 gi|377541061|dbj|GAB51969.1| ATP synthase subunit epsilon [Escherichia hermannii NBRC 105704]
          Length = 139

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 21  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQ-PGNVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  + +         AS+E AKA A++ V
Sbjct: 80  LADTAIRGQDLDEARALEAKRKAEDHIRNSHGDVDYAQASAELAKAIAKLRV 131


>gi|329296426|ref|ZP_08253762.1| F0F1 ATP synthase subunit epsilon [Plautia stali symbiont]
          Length = 139

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +K G+I + +  G  + I++S G + V   S+  +
Sbjct: 21  VQRIQVSGSEGELGIYPGHAPLLTAIKLGMIRIVKQHGEEEYIYLSGGVLEVQPGSTT-V 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A   + LD + A +   KA+  ++S         AS+E AKA A++ V
Sbjct: 80  LADTAIRGEDLDEARALEAKRKAEEHMNSSHGDVDYAQASAELAKAIAKLRV 131


>gi|145630341|ref|ZP_01786122.1| ATP synthase subunit epsilon [Haemophilus influenzae R3021]
 gi|260582256|ref|ZP_05850049.1| ATP synthase F1, epsilon subunit [Haemophilus influenzae NT127]
 gi|144984076|gb|EDJ91513.1| ATP synthase subunit epsilon [Haemophilus influenzae R3021]
 gi|260094624|gb|EEW78519.1| ATP synthase F1, epsilon subunit [Haemophilus influenzae NT127]
          Length = 142

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 2/110 (1%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
            + T+ S  +  +  + VKQ+      G  GILP H P L  +KPG++     +G  + I
Sbjct: 4   FNLTIVSAEQKIFEGE-VKQIQATGVEGELGILPGHTPLLTAIKPGIVKFTLKDGNEEVI 62

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
           +VS G + V  +  V ++A+ A     LDA    +   KA+  + S  S+
Sbjct: 63  YVSGGFLEVQPN-IVTVLADVAIRGSELDADRIHEAKRKAEENIVSHGSD 111


>gi|116254138|ref|YP_769976.1| F0F1 ATP synthase subunit epsilon [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|424872650|ref|ZP_18296312.1| ATP synthase, F1 epsilon subunit [Rhizobium leguminosarum bv.
           viciae WSM1455]
 gi|119367768|sp|Q1MAZ3.1|ATPE_RHIL3 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|115258786|emb|CAK09892.1| putative ATP synthase epsilon chain [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|393168351|gb|EJC68398.1| ATP synthase, F1 epsilon subunit [Rhizobium leguminosarum bv.
           viciae WSM1455]
          Length = 135

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 2/120 (1%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           AD  +F L S  ++  + + V +V +P+  G   ++ NH PT+  +KPGV++V    G  
Sbjct: 2   ADNFNFELVSPERLLLS-EMVTEVVIPATEGEMTVMANHAPTMTTIKPGVVSVRSASGKK 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           Q   V  G   +   +   ++AE A PV+ L        +  A+ EL  A     K++ +
Sbjct: 61  QDYVVFGGFADIL-PTGCTLLAESAVPVEELQKDELTRRIEAARQELEHAELHEHKSKLE 119


>gi|241206623|ref|YP_002977719.1| F0F1 ATP synthase subunit epsilon [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240860513|gb|ACS58180.1| ATP synthase F1, epsilon subunit [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 135

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 2/120 (1%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           AD  +F L S  ++  + + V +V +P+  G   ++ NH PT+  +KPGV++V    G  
Sbjct: 2   ADNFNFELVSPERLLLS-EMVTEVVIPATEGEMTVMANHAPTMTTIKPGVVSVRSASGKK 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           Q   V  G   +   +   ++AE A PV+ L        +  A+ EL  A     K++ +
Sbjct: 61  QDYVVFGGFADIL-PTGCTLLAESAVPVEELHKDELTRRIEAARKELEHAELHEHKSKLE 119


>gi|412990861|emb|CCO18233.1| predicted protein [Bathycoccus prasinos]
          Length = 84

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 45/71 (63%)

Query: 147 KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 206
           + FVSSG    + DSSV I+A EA PV+ LD +  R +LS+  ++  +A  +  KA  QI
Sbjct: 8   QYFVSSGFAFAHADSSVDILAVEAVPVEHLDETVVRKMLSEHTAKFQAAKDDYEKATHQI 67

Query: 207 AVEVAEALVAA 217
            ++V+ A+V+A
Sbjct: 68  GIDVSTAMVSA 78



 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 44/70 (62%)

Query: 77  SQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEA 136
           +++ FVSSG    + DSSV I+A EA PV+ LD +  R +LS+  ++  +A  +  KA  
Sbjct: 6   NKQYFVSSGFAFAHADSSVDILAVEAVPVEHLDETVVRKMLSEHTAKFQAAKDDYEKATH 65

Query: 137 QIAVEVAEAL 146
           QI ++V+ A+
Sbjct: 66  QIGIDVSTAM 75


>gi|316931856|ref|YP_004106838.1| ATP synthase F1 subunit epsilon [Rhodopseudomonas palustris DX-1]
 gi|315599570|gb|ADU42105.1| ATP synthase F1, epsilon subunit [Rhodopseudomonas palustris DX-1]
          Length = 139

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 5/88 (5%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEG-VSQKIF 81
           F L S   V ++ + V QVD+P   G FG+L  H P +A+++PG++TV  T G  +QKI 
Sbjct: 10  FDLVSPEMVAFSGE-VDQVDIPGAEGDFGVLAGHAPVVALIRPGILTV--TAGAATQKIV 66

Query: 82  VSSGTITVNDDSSVQIIAEEAHPVDSLD 109
           V  G   V+ +  + ++A+ A P   +D
Sbjct: 67  VLGGIAEVS-EKGLTVLADVATPAPDVD 93


>gi|409052481|ref|YP_006666439.1| ATP synthase CF1 epsilon subunit (chloroplast) [Trebouxiophyceae
           sp. MX-AZ01]
 gi|402746099|gb|AFQ93794.1| ATP synthase CF1 epsilon subunit (chloroplast) [Trebouxiophyceae
           sp. MX-AZ01]
          Length = 133

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 4/115 (3%)

Query: 32  FYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGV-ITVYETEGVSQKIFVSSGTITVN 90
            + NQ V+++ +P+ +G  G+L NH P +  L  GV ++  +TE  S  +    G   + 
Sbjct: 13  IFLNQEVEEIILPTNTGQMGVLTNHAPLMTALDVGVMLSRTKTEWTSVALM---GGFALV 69

Query: 91  DDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEA 145
             + V ++  EA   +S+D   A     +AQ+    AS +  K EA  A++ A A
Sbjct: 70  KQNQVTVLVNEAESAESIDPDQAERSYEEAQARWLEASGQKQKVEANFALKRARA 124


>gi|390569477|ref|ZP_10249762.1| F0F1 ATP synthase subunit epsilon [Burkholderia terrae BS001]
 gi|389938337|gb|EIN00181.1| F0F1 ATP synthase subunit epsilon [Burkholderia terrae BS001]
          Length = 141

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 3/108 (2%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  +G  GILP H P +  ++PG + +    G  + +FV+ G + V    +V ++
Sbjct: 21  KFVALPGEAGELGILPGHTPLITRIRPGAVRIESENGEEEFVFVAGGILEVQ-PGAVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASS--ETAKAEAQIAVEVAE 144
           A+ A     LD + A     +A+  L +  S  E A A+A++A   A+
Sbjct: 80  ADTAIRGKDLDEAKAEQARKRAEEALQNTGSNLEYATAQAELAYATAQ 127


>gi|372000167|gb|AEX65160.1| F0F1 ATP synthase epsilon chain [Pereskiopsis diguetii]
          Length = 133

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 3/124 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           ++  + + N++ Y N  VK++ +P+ SG  G+LPNH P    +  G++ +   E      
Sbjct: 3   LNLCVLTPNRIVY-NSEVKEIILPTNSGQIGVLPNHAPIATAVDIGILRIRLNE--QWLT 59

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
               G      ++ + ++  EA     +D   A+  L KA++ LS A  +    EA +A+
Sbjct: 60  MALMGGFARIGNNEITVLVNEAERGSDIDPQEAQQTLEKAEANLSKAEGKRQIIEANLAL 119

Query: 141 EVAE 144
             A+
Sbjct: 120 RRAK 123


>gi|294790388|ref|ZP_06755546.1| ATP synthase, Delta/Epsilon chain, beta-sandwich domain protein
          [Scardovia inopinata F0304]
 gi|294458285|gb|EFG26638.1| ATP synthase, Delta/Epsilon chain, beta-sandwich domain protein
          [Scardovia inopinata F0304]
          Length = 102

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 33/50 (66%)

Query: 43 VPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDD 92
          VPS +GA GILPNH P L++L  G +TV + EGV     VS G ++ +D+
Sbjct: 32 VPSTNGAMGILPNHEPILSLLDDGPLTVTDLEGVKHTFQVSDGFVSFDDN 81


>gi|226947192|ref|YP_002802265.1| F0F1 ATP synthase subunit epsilon [Azotobacter vinelandii DJ]
 gi|226722119|gb|ACO81290.1| F1 sector of membrane-bound ATP synthase, epsilon subunit
           [Azotobacter vinelandii DJ]
          Length = 140

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 1/83 (1%)

Query: 48  GAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDS 107
           G  GILP H+P L  LKPG + V +  G  +  ++S G + V   S V+++A+ A     
Sbjct: 29  GDVGILPGHMPLLTDLKPGPVRVIKQGGDEEIFYISGGFLEVQ-PSMVKVLADTATRAKD 87

Query: 108 LDASAARDVLSKAQSELSSASSE 130
           LD  AA++ +  AQ  LS   +E
Sbjct: 88  LDEVAAQEAVKAAQKALSEKGAE 110


>gi|340749563|ref|ZP_08686416.1| ATP synthase F1, epsilon subunit [Fusobacterium mortiferum ATCC
           9817]
 gi|229421393|gb|EEO36440.1| ATP synthase F1, epsilon subunit [Fusobacterium mortiferum ATCC
           9817]
          Length = 134

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 9/113 (7%)

Query: 41  VDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAE 100
           V V +  G  GILPNH P +A L  G + +    G  +K FVS G + ++++  V IIA 
Sbjct: 23  VLVRTTEGDMGILPNHSPFIAGLSTGEMKI-RLNGKEEKYFVSEGLLEISNN-VVTIIAT 80

Query: 101 EAHPVDSLDASAARD-------VLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           EA P D LD   A+         L+K Q +     ++    +A + V+VAE L
Sbjct: 81  EAIPADQLDVERAKKEVEELKAKLAKMQEDKDILLTQKNLHKALMKVQVAEKL 133


>gi|91226239|ref|ZP_01261079.1| F0F1 ATP synthase subunit epsilon [Vibrio alginolyticus 12G01]
 gi|262392805|ref|YP_003284659.1| ATP synthase subunit epsilon [Vibrio sp. Ex25]
 gi|269965298|ref|ZP_06179419.1| ATP synthase subunit epsilon [Vibrio alginolyticus 40B]
 gi|451972197|ref|ZP_21925408.1| F0F1 ATP synthase subunit epsilon [Vibrio alginolyticus E0666]
 gi|114611|sp|P12988.1|ATPE_VIBAL RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|48340|emb|CAA34182.1| unnamed protein product [Vibrio alginolyticus]
 gi|91189250|gb|EAS75529.1| F0F1 ATP synthase subunit epsilon [Vibrio alginolyticus 12G01]
 gi|262336399|gb|ACY50194.1| ATP synthase epsilon chain [Vibrio sp. Ex25]
 gi|269830099|gb|EEZ84327.1| ATP synthase subunit epsilon [Vibrio alginolyticus 40B]
 gi|451931862|gb|EMD79545.1| F0F1 ATP synthase subunit epsilon [Vibrio alginolyticus E0666]
          Length = 140

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 12/121 (9%)

Query: 29  NKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTIT 88
            K+F  +  V+   V    G  GI   H P L  +KPG++ + +  G  + I+VS G + 
Sbjct: 15  KKIF--SGRVETFQVTGSEGELGIFHGHTPLLTAIKPGMVRIVKQHGHEEIIYVSGGMVE 72

Query: 89  VNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIA 139
           +   ++  ++A+ A   + LDA+ A +   +A+ ++ +         A+SE AKA AQ+ 
Sbjct: 73  IQPGTAT-VLADTAIRGEELDAAKAEEAKRRAEEQIQNQHGDMDFAQAASELAKAIAQLR 131

Query: 140 V 140
           V
Sbjct: 132 V 132


>gi|311281704|ref|YP_003943935.1| ATP synthase F1 subunit epsilon [Enterobacter cloacae SCF1]
 gi|308750899|gb|ADO50651.1| ATP synthase F1, epsilon subunit [Enterobacter cloacae SCF1]
          Length = 139

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G I V    +V +
Sbjct: 21  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQFGHEEFIYLSGGIIEVQ-PGTVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  + S         AS+E AKA A++ V
Sbjct: 80  LADTAIRGQDLDEARALESKRKAEEHIKSSHGDVDYAQASAELAKAIAKLRV 131


>gi|423076075|ref|ZP_17064789.1| ATP synthase F1, epsilon subunit [Desulfitobacterium hafniense DP7]
 gi|361852892|gb|EHL05090.1| ATP synthase F1, epsilon subunit [Desulfitobacterium hafniense DP7]
          Length = 132

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 2/85 (2%)

Query: 41  VDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAE 100
           V +P  +G  GILPNH P ++ ++ GVI  Y   G  QKI  S G + V+D+  V I+A+
Sbjct: 24  VVLPGGNGEIGILPNHAPLISSIEIGVIR-YTVNGKVQKIATSGGFVEVSDN-KVTILAD 81

Query: 101 EAHPVDSLDASAARDVLSKAQSELS 125
            A P + +D   A     +A+  L+
Sbjct: 82  TAEPGEKVDLDRALAAKERAEKRLT 106


>gi|325922229|ref|ZP_08184015.1| ATP synthase, F1 epsilon subunit [Xanthomonas gardneri ATCC 19865]
 gi|325547299|gb|EGD18367.1| ATP synthase, F1 epsilon subunit [Xanthomonas gardneri ATCC 19865]
          Length = 148

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 4/119 (3%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           Q+D    SG    ++ + V++V +P   G FG++  H P L IL  G++ ++   G   +
Sbjct: 18  QLDIVSLSG--ALWSGE-VREVSLPGSEGRFGVMARHTPLLTILAEGMLHIHPVSGEPLQ 74

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 138
           I+V  G + V  D  V ++A+ A   + LD + A    +   S L+++ ++TA A+  +
Sbjct: 75  IYVCGGYVEVQPD-KVFVLADLAARSEDLDQARAEAARAAVTSPLATSLTDTAYAQVHM 132


>gi|86747390|ref|YP_483886.1| F0F1 ATP synthase subunit epsilon [Rhodopseudomonas palustris
          HaA2]
 gi|86570418|gb|ABD04975.1| ATP synthase F1, epsilon subunit [Rhodopseudomonas palustris
          HaA2]
          Length = 139

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 2/63 (3%)

Query: 23 FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
          F L S   V ++ + V QVD+P   G FG+L  H P +A+++PG++TV    G  QKI V
Sbjct: 10 FDLVSPEMVAFSGE-VDQVDIPGAEGDFGVLAGHAPVVAVIRPGILTV-TAGGAQQKIVV 67

Query: 83 SSG 85
            G
Sbjct: 68 LGG 70


>gi|1396040|dbj|BAA07794.1| atpE [Anthoceros formosae]
          Length = 138

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 5/126 (3%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSF-SGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           ++  + + N++ + N  V+++ VPS  SG  G+LPNH P L  L  G+I +      S  
Sbjct: 3   LNLRVMAPNRIVW-NSEVEEI-VPSTNSGXIGVLPNHAPLLTALDIGIIKICLNGEWSTM 60

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 139
             +  G   + D++ + I+  EA     ++   AR+    AQ +L+ A     K EA +A
Sbjct: 61  ALM--GGFAMIDNNGMTILVNEAEKATEINPQEARENYKMAQKDLAKAEGGKQKIEANLA 118

Query: 140 VEVAEA 145
            + A+A
Sbjct: 119 FKRAKA 124


>gi|186477772|ref|YP_001859242.1| F0F1 ATP synthase subunit epsilon [Burkholderia phymatum STM815]
 gi|226740231|sp|B2JJ94.1|ATPE_BURP8 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|184194231|gb|ACC72196.1| ATP synthase F1, epsilon subunit [Burkholderia phymatum STM815]
          Length = 141

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 3/108 (2%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  +G  GILP H P +  ++PG + +    G  + +FV+ G + V    +V ++
Sbjct: 21  KFVALPGEAGELGILPGHTPLITRIRPGAVRIESENGEEEFVFVAGGILEVQ-PGAVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASS--ETAKAEAQIAVEVAE 144
           A+ A     LD + A     +A+  L +  S  E A A+A++A   A+
Sbjct: 80  ADTAIRGKDLDEAKAEQARKRAEEALQNTGSNLEYATAQAELAYATAQ 127


>gi|119776775|ref|YP_929515.1| F0F1 ATP synthase subunit epsilon [Shewanella amazonensis SB2B]
 gi|119769275|gb|ABM01846.1| ATP synthase F1, epsilon subunit [Shewanella amazonensis SB2B]
          Length = 141

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+ + V    G  GI+P H P L  +KPG++ + +  G  +  ++S G + V  + SV +
Sbjct: 21  VEHLQVTGGEGELGIMPGHAPLLTFIKPGMVRIVKQHGKEEVFYLSGGLLEVQAN-SVSV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
           +A+ A     +D  AA +   +A++ ++ A ++
Sbjct: 80  LADVALRAKDIDEQAALEAKRRAEAHMAEAGAD 112


>gi|359726200|ref|ZP_09264896.1| F0F1 ATP synthase subunit epsilon [Leptospira weilii str.
           2006001855]
          Length = 127

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 64/114 (56%), Gaps = 4/114 (3%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           A +++ ++ S  K+ Y  + V  + VP   G FGILPNH P +A+L  GV+ + + E + 
Sbjct: 3   AHKLNVSVISPEKILYKGE-VDSLVVPGNEGFFGILPNHAPLVAVLGIGVLEIRKGEKL- 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSET 131
           + + V  G I V ++ SV I+ +     D ++  A +  L++A+ +LS + S+ 
Sbjct: 61  KVLSVEGGFIEVKEN-SVSILTDHGALKDDINLEAEKKALAEAE-KLSPSDSKN 112


>gi|345859327|ref|ZP_08811677.1| ATP synthase F1, epsilon subunit [Desulfosporosinus sp. OT]
 gi|344327474|gb|EGW38902.1| ATP synthase F1, epsilon subunit [Desulfosporosinus sp. OT]
          Length = 135

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 58/103 (56%), Gaps = 2/103 (1%)

Query: 43  VPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEA 102
           +P   G  GILPNH P +A +  GV+  Y   G  +++ V+ G + V ++S++ ++A+ A
Sbjct: 26  IPGELGELGILPNHAPLIAGMDIGVLR-YNLNGAVKRVAVAGGFVEVIENSAI-VLADTA 83

Query: 103 HPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEA 145
              + +D + A++   +A+  LS+ ++E     A+ A+  A A
Sbjct: 84  ELSEDIDVARAQEARERAKKRLSTRTNEIDVRRAEYALRRAAA 126


>gi|152993353|ref|YP_001359074.1| F0F1 ATP synthase subunit epsilon [Sulfurovum sp. NBC37-1]
 gi|189081385|sp|A6QB58.1|ATPE_SULNB RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|151425214|dbj|BAF72717.1| F0F1-type ATP synthase, epsilon subunit [Sulfurovum sp. NBC37-1]
          Length = 128

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 10/122 (8%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           M   + + N V + + +VKQV +P   G FG+LP H   +++L  GVI + + +G    +
Sbjct: 4   MKLEIVTPNGVIF-DDDVKQVTLPGSEGEFGVLPKHATLVSLLDTGVIVIEKADGSEVAV 62

Query: 81  FVSSGTITVND-------DSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAK 133
            ++SG + V++       D +V +  E++    +L+   A++++ KA+S   + +S  +K
Sbjct: 63  AINSGYVKVDEEKTTCIVDGAVALSGEDSDLAKALE--EAKELIKKAESSSVAIASAVSK 120

Query: 134 AE 135
            E
Sbjct: 121 VE 122


>gi|392427797|ref|YP_006468791.1| ATP synthase, F1 epsilon subunit [Desulfosporosinus acidiphilus
           SJ4]
 gi|391357760|gb|AFM43459.1| ATP synthase, F1 epsilon subunit [Desulfosporosinus acidiphilus
           SJ4]
          Length = 135

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 2/110 (1%)

Query: 36  QNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSV 95
           ++V+ V +P  +G  GILPNH P +A L  GV+  Y   G  +++ ++ G + V D+S+ 
Sbjct: 19  EDVEFVVLPGGAGELGILPNHAPLIAGLDIGVVR-YTINGTVKRLALAGGFVEVADNSAT 77

Query: 96  QIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEA 145
            I+A+ A   +++D   A     +A   L+S +SE     A+ A+  A A
Sbjct: 78  -ILADTAELSENIDLQRALAAKERAAKRLTSPTSEVDVKRAEYALRKAVA 126


>gi|149190473|ref|ZP_01868744.1| F0F1 ATP synthase subunit epsilon [Vibrio shilonii AK1]
 gi|148835727|gb|EDL52693.1| F0F1 ATP synthase subunit epsilon [Vibrio shilonii AK1]
          Length = 140

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 11/123 (8%)

Query: 27  SGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGT 86
           S  K  ++ + V+   V    G  GI   H P L  +KPG++ + +  G  + I+VS G 
Sbjct: 12  SAEKKLFSGR-VETFQVSGSEGELGIFHGHTPLLTAIKPGMVRIVKQHGHEEFIYVSGGI 70

Query: 87  ITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQ 137
           + V   ++  ++A+ A   + LDA+ A +   KA+  + +         A+SE AKA AQ
Sbjct: 71  VEVQPGTAT-VLADTAIRGEELDAAKAEEAKRKAEEHIQNQHGDMDFAQAASELAKAIAQ 129

Query: 138 IAV 140
           + V
Sbjct: 130 LRV 132


>gi|293603081|ref|ZP_06685515.1| ATP synthase subunit epsilon [Achromobacter piechaudii ATCC 43553]
 gi|292818475|gb|EFF77522.1| ATP synthase subunit epsilon [Achromobacter piechaudii ATCC 43553]
          Length = 141

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 6/106 (5%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  +G  GILP H P ++ ++PG + +   +   + IFV+ G + V    SV ++
Sbjct: 21  KFVVLPGEAGELGILPGHTPLISRIRPGTVKIVRADQGEENIFVAGGILEVQ-PGSVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAE 144
           A+ A     LD + A +   KA+  L++     AK +A IAV  AE
Sbjct: 80  ADTAIRASDLDEARAVEARKKAEEALAN-----AKDKADIAVVEAE 120


>gi|119367770|sp|Q2J3I5.2|ATPE_RHOP2 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
          synthase F1 sector epsilon subunit; AltName:
          Full=F-ATPase epsilon subunit
          Length = 135

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 2/63 (3%)

Query: 23 FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
          F L S   V ++ + V QVD+P   G FG+L  H P +A+++PG++TV    G  QKI V
Sbjct: 6  FDLVSPEMVAFSGE-VDQVDIPGAEGDFGVLAGHAPVVAVIRPGILTV-TAGGAQQKIVV 63

Query: 83 SSG 85
            G
Sbjct: 64 LGG 66


>gi|424828109|ref|ZP_18252850.1| F0F1 ATP synthase subunit epsilon [Clostridium sporogenes PA 3679]
 gi|365979592|gb|EHN15645.1| F0F1 ATP synthase subunit epsilon [Clostridium sporogenes PA 3679]
          Length = 133

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 2/106 (1%)

Query: 19  DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQ 78
           D ++FT+ +  K     + +K+V      G   ILPNHV  +  LKP +    +  G  +
Sbjct: 3   DNIEFTIFTPEKNIKIGE-IKEVITEGLDGELAILPNHVNMITYLKPTITKYIDLSGNKK 61

Query: 79  KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSEL 124
            IF SSG + V +++ + II + +   + +D   A     +A+  L
Sbjct: 62  NIFTSSGVLNV-ENNKIYIICDASEKPEDIDIKRAEKAKKRAEERL 106


>gi|304392605|ref|ZP_07374545.1| ATP synthase F1, epsilon subunit [Ahrensia sp. R2A130]
 gi|303295235|gb|EFL89595.1| ATP synthase F1, epsilon subunit [Ahrensia sp. R2A130]
          Length = 133

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 2/120 (1%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           AD   F L S  K+  +    + V VP+  G  G+L NH P +  L+PG+++V   +G  
Sbjct: 2   ADTFTFELVSPEKLMLSGA-AEIVTVPAVEGDMGVLSNHAPVMTSLRPGLVSVKMADGDE 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
            + FV  G   +  D +V ++AE A P   L +         A+  +++   E  KA+ Q
Sbjct: 61  TEYFVKGGFADITPD-AVTVLAEFAIPRGELTSEMMAGQRKAAEEAMNAEKDENRKADHQ 119


>gi|403383655|ref|ZP_10925712.1| F0F1 ATP synthase subunit epsilon [Kurthia sp. JC30]
          Length = 135

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 6/117 (5%)

Query: 41  VDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAE 100
           V V + SG  GILP H+PT+A L  GV+ V      ++ + VS G + +  +  V I++ 
Sbjct: 23  VSVRATSGEMGILPGHIPTVAPLAVGVVRVQTANNKTELVAVSGGFVEIRAE-QVTILSP 81

Query: 101 EAHPVDSLDASAARDVLSKAQSELSSASS--ETAKAEAQIAVEVAEALKIFVSSGTI 155
            A   DS+D + A++ L +A++ L +     +  +AEA ++  +    +I V  G I
Sbjct: 82  SAEMADSIDLARAKEALKRAETRLQAKKDGVDVKRAEAALSRAIN---RINVKEGNI 135


>gi|421486349|ref|ZP_15933895.1| F0F1 ATP synthase subunit epsilon [Achromobacter piechaudii HLE]
 gi|400195406|gb|EJO28396.1| F0F1 ATP synthase subunit epsilon [Achromobacter piechaudii HLE]
          Length = 141

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 6/106 (5%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  +G  GILP H P ++ ++PG + +   +   + IFV+ G + V    SV ++
Sbjct: 21  KFVVLPGEAGELGILPGHTPLISRIRPGTVKIVRADQGEENIFVAGGILEVQ-PGSVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAE 144
           A+ A     LD + A +   KA+  L++     AK +A IAV  AE
Sbjct: 80  ADTAIRAADLDEARALEARKKAEEALAN-----AKDKADIAVVEAE 120


>gi|353441302|gb|AEQ94260.1| ATPase subunit (chloroplast) [Eutreptia viridis]
          Length = 129

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/117 (23%), Positives = 58/117 (49%), Gaps = 1/117 (0%)

Query: 29  NKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTIT 88
           ++VF+ N+   ++ +P+ +G  G+L NH+P L  L  G I +  ++ V   +    G   
Sbjct: 5   DRVFWKNK-ATEIILPTLNGQIGVLSNHIPVLTGLDIGTILIRTSDSVDWLVICIMGGFA 63

Query: 89  VNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEA 145
           +  ++ + ++  EA     +D + A  +  +A++ L   S    K +A +  + A+A
Sbjct: 64  LVKNNQITVLVNEAEFSSDIDIATAESLFLEAKTNLEKVSEGKQKLDANLQFKKAKA 120


>gi|374583742|ref|ZP_09656836.1| ATP synthase, F1 epsilon subunit [Desulfosporosinus youngiae DSM
           17734]
 gi|374419824|gb|EHQ92259.1| ATP synthase, F1 epsilon subunit [Desulfosporosinus youngiae DSM
           17734]
          Length = 137

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 2/111 (1%)

Query: 35  NQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSS 94
           N++V+ V  P   G  G+LPNH P +A L  GVI  Y  +G  +   ++ G + V D+S+
Sbjct: 18  NEDVEFVVFPGAMGELGVLPNHAPLIAGLDIGVIR-YTLKGTVKHAAIAGGFVEVVDNSA 76

Query: 95  VQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEA 145
           + ++A+ A   + +D   A +   +A   LS+ ++E     A+ A+  A A
Sbjct: 77  I-VLADTAELGEGIDLKRAMEAKERALKRLSARTNEIDVRRAEYALRRAVA 126


>gi|319956204|ref|YP_004167467.1| ATP synthase F1 subunit epsilon [Nitratifractor salsuginis DSM
           16511]
 gi|319418608|gb|ADV45718.1| ATP synthase F1 subcomplex epsilon subunit [Nitratifractor
           salsuginis DSM 16511]
          Length = 129

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 10/111 (9%)

Query: 19  DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQ 78
           + M   + + N + Y   +VK V +P   G FG+LP H   +++L  GVIT+   +G   
Sbjct: 2   NTMKLEIVTPNGLIYEG-DVKMVTLPGKEGEFGVLPGHASLVSLLDTGVITIETADGKEI 60

Query: 79  KIFVSSGTITVND-------DSSVQIIAEEAHPVDSLDASAARDVLSKAQS 122
            + ++ G + V++       D +V I  EE    + L  S A+++L KAQ+
Sbjct: 61  MVAINQGYVKVDENKVSCVVDGAVLISDEEGSLSERL--SEAKELLQKAQT 109


>gi|255280302|ref|ZP_05344857.1| ATP synthase F1, epsilon subunit [Bryantella formatexigens DSM
           14469]
 gi|255269393|gb|EET62598.1| ATP synthase F1, epsilon subunit [Marvinbryantia formatexigens DSM
           14469]
          Length = 141

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 66/132 (50%), Gaps = 9/132 (6%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
             + S  ++FY  + V  V++ +  G  GI  NH+P   ++ PG++T+ E +G  +   +
Sbjct: 9   LNIISPERIFYEGKAV-MVELTTSEGEVGIYKNHIPMTLLIVPGIVTITEEDGSKRLAAI 67

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSA-------SSETAKAE 135
            SG + V  D  V I+AE A   + +D + A++   +A+  L           +E A  +
Sbjct: 68  HSGFMEVLPD-KVTIMAEVAEWPEEIDVNRAKEAQVRAERRLQRKDPMLNLNRAEMALRK 126

Query: 136 AQIAVEVAEALK 147
           A +  E+A+ +K
Sbjct: 127 ALVRQELADTVK 138


>gi|336247925|ref|YP_004591635.1| F0F1 ATP synthase subunit epsilon [Enterobacter aerogenes KCTC
           2190]
 gi|334733981|gb|AEG96356.1| F0F1 ATP synthase subunit epsilon [Enterobacter aerogenes KCTC
           2190]
          Length = 139

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 21  VEKIQVTGSEGELGIFPGHAPLLTAIKPGMIRIVKQFGHEEFIYLSGGILEVQ-PGNVIV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  + S         AS+E AKA A++ V
Sbjct: 80  LADTAIRGQDLDEARALEAKRKAEEHIKSSHGDVDYAQASAELAKAIAKLRV 131


>gi|114565194|ref|YP_752708.1| ATP synthase F1 subunit epsilon [Shewanella frigidimarina NCIMB
           400]
 gi|119367781|sp|Q07VU5.1|ATPE_SHEFN RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|114336487|gb|ABI73869.1| ATP synthase F1, epsilon subunit [Shewanella frigidimarina NCIMB
           400]
          Length = 142

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 15/137 (10%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           Q+D   A  N +F+    V  ++V    G  GI+PNHV  L  +KPG+    + +G  + 
Sbjct: 7   QLDIVSAE-NSIFHGQ--VSFLEVNGAEGELGIMPNHVALLTKIKPGMARFIKQDGSEEV 63

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASS---------E 130
           +++S G + V   +++ ++A+ A   D +D  AA +   +A+  +++A +         E
Sbjct: 64  LYLSGGLLEVQ-PTAISVLADVALRADDIDEKAALEAKERAEQAIANAGTDFNYEAATIE 122

Query: 131 TAKAEAQIAVEVAEALK 147
            AK+ AQ+   V E +K
Sbjct: 123 LAKSLAQL--RVVECIK 137


>gi|420256452|ref|ZP_14759296.1| ATP synthase, F1 epsilon subunit [Burkholderia sp. BT03]
 gi|398043173|gb|EJL36102.1| ATP synthase, F1 epsilon subunit [Burkholderia sp. BT03]
          Length = 141

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 3/108 (2%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  +G  GILP H P +  ++PG + +    G  + +FV+ G + V    +V ++
Sbjct: 21  KFVALPGEAGELGILPGHTPLITRIRPGAVRIESESGEEEFVFVAGGILEVQ-PGAVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASS--ETAKAEAQIAVEVAE 144
           A+ A     LD + A     +A+  L +  S  E A A+A++A   A+
Sbjct: 80  ADTAIRGKDLDEAKAEQARKRAEEALQNTGSNLEYATAQAELAYATAQ 127


>gi|153834295|ref|ZP_01986962.1| ATP synthase F1, epsilon subunit [Vibrio harveyi HY01]
 gi|156972755|ref|YP_001443662.1| F0F1 ATP synthase subunit epsilon [Vibrio harveyi ATCC BAA-1116]
 gi|269962671|ref|ZP_06177016.1| ATP synthase subunit epsilon [Vibrio harveyi 1DA3]
 gi|350529793|ref|ZP_08908734.1| F0F1 ATP synthase subunit epsilon [Vibrio rotiferianus DAT722]
 gi|388601685|ref|ZP_10160081.1| F0F1 ATP synthase subunit epsilon [Vibrio campbellii DS40M4]
 gi|424034636|ref|ZP_17774039.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HENC-01]
 gi|424043009|ref|ZP_17780659.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HENC-02]
 gi|424048376|ref|ZP_17785929.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HENC-03]
 gi|444426973|ref|ZP_21222372.1| F0F1 ATP synthase subunit epsilon [Vibrio campbellii CAIM 519 =
           NBRC 15631]
 gi|148869303|gb|EDL68317.1| ATP synthase F1, epsilon subunit [Vibrio harveyi HY01]
 gi|156524349|gb|ABU69435.1| hypothetical protein VIBHAR_00420 [Vibrio harveyi ATCC BAA-1116]
 gi|269832594|gb|EEZ86708.1| ATP synthase subunit epsilon [Vibrio harveyi 1DA3]
 gi|408872297|gb|EKM11518.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HENC-01]
 gi|408882303|gb|EKM21139.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HENC-02]
 gi|408882615|gb|EKM21421.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HENC-03]
 gi|444239740|gb|ELU51297.1| F0F1 ATP synthase subunit epsilon [Vibrio campbellii CAIM 519 =
           NBRC 15631]
          Length = 140

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 10/113 (8%)

Query: 37  NVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQ 96
            V+   V    G  GI   H P L+ +KPG++ + +  G  + I+VS G + V   ++  
Sbjct: 21  RVETFQVTGSEGELGIFHGHTPLLSAIKPGMVRIVKQHGHEEFIYVSGGMVEVQPGTAT- 79

Query: 97  IIAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           ++A+ A   + LDA+ A +   +A+ ++ +         A+SE AKA AQ+ V
Sbjct: 80  VLADTAIRGEDLDAAKAEEAKRRAEEQIQNQHGDMDFAQAASELAKAIAQLRV 132


>gi|255021564|ref|ZP_05293607.1| ATP synthase epsilon chain [Acidithiobacillus caldus ATCC 51756]
 gi|340782438|ref|YP_004749045.1| ATP synthase subunit epsilon [Acidithiobacillus caldus SM-1]
 gi|254968952|gb|EET26471.1| ATP synthase epsilon chain [Acidithiobacillus caldus ATCC 51756]
 gi|340556590|gb|AEK58344.1| ATP synthase epsilon chain [Acidithiobacillus caldus SM-1]
          Length = 165

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 5/111 (4%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+ V VP   G  GILP H P ++IL+ G + +   EG  Q +F+  G + V   + V +
Sbjct: 17  VEFVVVPGMLGELGILPGHAPLISILRAGELRITPVEGHPQILFLEGGMVEVQ-PAVVTV 75

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSSASSET----AKAEAQIAVEVAE 144
           +A+ +  V  +D   +   ++ AQ  L      +    AKAE ++  E+A+
Sbjct: 76  LADNSLRVTDIDPKLSESRIAAAQRALKDHRGHSEMDFAKAELELQRELAK 126


>gi|344923835|ref|ZP_08777296.1| ATP synthase epsilon chain [Candidatus Odyssella thessalonicensis
           L13]
          Length = 91

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 2/89 (2%)

Query: 12  LARRGYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVY 71
           +AR+   DQ+  ++ +  +  YT  +V  V +P   G FG+LP H P ++ L+ G I VY
Sbjct: 1   MARQLLDDQLSLSIITPEQTLYTG-DVSMVVIPGAEGDFGVLPKHAPFISTLRAGEIKVY 59

Query: 72  ETEGVSQKIFVSSGTITVNDDSSVQIIAE 100
             + VS    ++ G   V +D   QI+A+
Sbjct: 60  RNDTVSDVFRITGGFAEVVNDKC-QIVAD 87


>gi|410451833|ref|ZP_11305833.1| ATP synthase F1, epsilon subunit [Leptospira sp. Fiocruz LV3954]
 gi|410014338|gb|EKO76470.1| ATP synthase F1, epsilon subunit [Leptospira sp. Fiocruz LV3954]
          Length = 127

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 3/100 (3%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           A+++  ++ S  K+ Y  + V  + VP   G FGILPNH P +A+L  G++ + + E + 
Sbjct: 3   ANKLKVSVISPEKILYKGE-VDSLVVPGSEGFFGILPNHAPLVAVLGIGILEIRKGEKL- 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVL 117
           + + +  G I V ++ S+ I+ +     + +D  A R VL
Sbjct: 61  KVLSIEGGFIEVKEN-SISILTDHGALKEDIDIEAERKVL 99


>gi|311103599|ref|YP_003976452.1| ATP synthase F1 subunit epsilon [Achromobacter xylosoxidans A8]
 gi|310758288|gb|ADP13737.1| ATP synthase F1, epsilon subunit [Achromobacter xylosoxidans A8]
          Length = 141

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 6/106 (5%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  +G  GILP H P ++ ++PG + +   +   + IFV+ G + V    SV ++
Sbjct: 21  KFVVLPGEAGELGILPGHTPLISRIRPGTVKIVRADQGEENIFVAGGILEVQ-PGSVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAE 144
           A+ A     LD + A +   KA+  L++     AK +A IAV  AE
Sbjct: 80  ADTAIRAADLDEARALEARQKAEQALAN-----AKDKADIAVVEAE 120


>gi|334342193|ref|YP_004547173.1| ATP synthase F1 subunit epsilon [Desulfotomaculum ruminis DSM 2154]
 gi|334093547|gb|AEG61887.1| ATP synthase F1, epsilon subunit [Desulfotomaculum ruminis DSM
           2154]
          Length = 132

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 2/97 (2%)

Query: 44  PSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAH 103
           P  +G  G+LP H P +  LK GV+ V +  G   K+ VS G + V  +S V ++A+ A 
Sbjct: 27  PGAAGELGVLPEHAPLVTALKVGVMRVQQG-GKFFKVAVSGGFMEVK-NSRVVVLADTAE 84

Query: 104 PVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
             D ++   A++   +A+  L++ ++E   A A+IA+
Sbjct: 85  RADQINVERAKEAKQRAEQRLAAKNAEIDVARAEIAL 121


>gi|323496905|ref|ZP_08101933.1| F0F1 ATP synthase subunit epsilon [Vibrio sinaloensis DSM 21326]
 gi|323317979|gb|EGA70962.1| F0F1 ATP synthase subunit epsilon [Vibrio sinaloensis DSM 21326]
          Length = 140

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 12/121 (9%)

Query: 29  NKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTIT 88
            K+F  +  V+   V    G  GI   H P L  +KPG++ + +  G  + I+VS G + 
Sbjct: 15  KKIF--SGRVETFQVTGSEGELGIFHGHTPLLTAIKPGMVRIVKQHGHEEIIYVSGGMVE 72

Query: 89  VNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQS---------ELSSASSETAKAEAQIA 139
           V   ++  ++A+ A   + LDA+ A +   +A+          + + A+SE AKA AQ+ 
Sbjct: 73  VQPGTAT-VLADTAIRGEELDAAKAEEAKRRAEENIQNQHGDMDFAQAASELAKAIAQLR 131

Query: 140 V 140
           V
Sbjct: 132 V 132


>gi|116692968|ref|YP_838501.1| ATP synthase F1 subunit epsilon [Burkholderia cenocepacia HI2424]
 gi|116650968|gb|ABK11608.1| ATP synthase F1 subcomplex epsilon subunit [Burkholderia
           cenocepacia HI2424]
          Length = 152

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 5/134 (3%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETE-GVSQK 79
           M   + S   V Y   +   V VP  SG  GI P+H P L  ++PGV+T+ +   G  ++
Sbjct: 5   MKLDIVSVEAVLYAG-DAHFVVVPGESGELGIYPHHAPLLTRIRPGVVTLVDAPTGEHRR 63

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKA--EAQ 137
           + V+ G + V+ D  V +IA+ A     LD    R+    A       + E  +A   A 
Sbjct: 64  LLVAGGVLEVSRD-GVTLIADHALRTPELDELRTREARHAADDWRQRYAHENRRAFDFAS 122

Query: 138 IAVEVAEALKIFVS 151
              E+ E ++ F +
Sbjct: 123 ARAELMEEIRRFFA 136


>gi|444353971|ref|YP_007390115.1| ATP synthase epsilon chain (EC 3.6.3.14) [Enterobacter aerogenes
           EA1509E]
 gi|443904801|emb|CCG32575.1| ATP synthase epsilon chain (EC 3.6.3.14) [Enterobacter aerogenes
           EA1509E]
          Length = 137

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 19  VEKIQVTGSEGELGIFPGHAPLLTAIKPGMIRIVKQFGHEEFIYLSGGILEVQ-PGNVIV 77

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  + S         AS+E AKA A++ V
Sbjct: 78  LADTAIRGQDLDEARALEAKRKAEEHIKSSHGDVDYAQASAELAKAIAKLRV 129


>gi|319997196|gb|ADV91192.1| mitochondrial ATP synthase F1 delta subunit [Karlodinium micrum]
          Length = 154

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 61/130 (46%), Gaps = 17/130 (13%)

Query: 1   MAARLVTSATRLARR----GYADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNH 56
           MA R    A RL R     G  +++  TLAS  +  Y  + V  V VP   G F +  NH
Sbjct: 1   MALR----AGRLLRFAEAAGVTNRLLLTLASPGECVYLKKPVDSVTVPGTEGTFTVTNNH 56

Query: 57  VPTLAILKPGVITVYETEGVSQK-IFVSSGTITVND--DSSVQIIAE----EAHPVDSLD 109
              ++ LK GVITV  T+G  +K  FVS G +  N   D S    AE    E  P  +LD
Sbjct: 57  SLIVSQLKAGVITV--TDGPEKKDYFVSDGFLFFNHPTDGSGCCTAEVSAVECVPTSALD 114

Query: 110 ASAARDVLSK 119
              A  VLS+
Sbjct: 115 KDRAAQVLSE 124


>gi|312882262|ref|ZP_07742008.1| F0F1 ATP synthase subunit epsilon [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309370106|gb|EFP97612.1| F0F1 ATP synthase subunit epsilon [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 140

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+   V    G  GI   H P L  +KPG++ + +  G  + +++S G + V   S+  +
Sbjct: 22  VETFQVTGSEGELGIFHGHTPLLTAIKPGMVRIVKQHGHEEIVYISGGMVEVQPGSAT-V 80

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A   + LDA+ A +   +A+ ++ +         A+SE AKA AQ+ V
Sbjct: 81  LADTAIRAEELDAAKAEEAKRRAEEKIQNQHGDMDFAQAASELAKAIAQLRV 132


>gi|386391340|ref|ZP_10076121.1| ATP synthase, F1 epsilon subunit [Desulfovibrio sp. U5L]
 gi|385732218|gb|EIG52416.1| ATP synthase, F1 epsilon subunit [Desulfovibrio sp. U5L]
          Length = 139

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 2/89 (2%)

Query: 36  QNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSV 95
           Q+V  V  P   G FG++ NH+P L+ L  G + +Y+  G +  +FVS G   V+ +  V
Sbjct: 18  QDVDYVGAPGLLGEFGVMANHIPFLSALGIGSL-MYKVGGKANYVFVSGGFAEVSGN-KV 75

Query: 96  QIIAEEAHPVDSLDASAARDVLSKAQSEL 124
            I+AE A   + +D   AR    +A+  L
Sbjct: 76  TILAEVAERPEDIDVERARKAQDRAKQRL 104


>gi|238750323|ref|ZP_04611825.1| ATP synthase epsilon chain [Yersinia rohdei ATCC 43380]
 gi|238711556|gb|EEQ03772.1| ATP synthase epsilon chain [Yersinia rohdei ATCC 43380]
          Length = 140

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V   S V +
Sbjct: 22  VQKIQVTGSEGELGIYPGHAPLLTTIKPGMIRIVKQFGEEEFIYLSGGILEVQ-PSVVIV 80

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA++ +S+         AS+E AKA A++ V
Sbjct: 81  LADTAIRGTDLDEAKALESKRKAEAHISNSHGDVDYAQASAELAKAIAKLRV 132


>gi|421749903|ref|ZP_16187249.1| F0F1 ATP synthase subunit epsilon [Cupriavidus necator HPC(L)]
 gi|409771149|gb|EKN53546.1| F0F1 ATP synthase subunit epsilon [Cupriavidus necator HPC(L)]
          Length = 138

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 1/99 (1%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  SG  GILP H P +  + PG + + + +G  + +FV+ G + V     V ++
Sbjct: 21  KFVALPGESGELGILPGHTPLITRIHPGAVRIEKEDGSEEFVFVAGGILEVQ-PKHVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           A+ A     LD + A++    A+  L + SSE   A AQ
Sbjct: 80  ADTAIRGADLDEAKAQEAKRAAEELLQNQSSEFDLARAQ 118


>gi|330831704|ref|YP_004394656.1| ATP synthase subunit epsilon [Aeromonas veronii B565]
 gi|406675074|ref|ZP_11082265.1| ATP synthase epsilon chain 1 [Aeromonas veronii AMC35]
 gi|423202997|ref|ZP_17189575.1| ATP synthase epsilon chain 1 [Aeromonas veronii AER39]
 gi|423211653|ref|ZP_17198186.1| ATP synthase epsilon chain 1 [Aeromonas veronii AER397]
 gi|328806840|gb|AEB52039.1| ATP synthase epsilon chain [Aeromonas veronii B565]
 gi|404613312|gb|EKB10345.1| ATP synthase epsilon chain 1 [Aeromonas veronii AER397]
 gi|404614253|gb|EKB11256.1| ATP synthase epsilon chain 1 [Aeromonas veronii AER39]
 gi|404628212|gb|EKB24998.1| ATP synthase epsilon chain 1 [Aeromonas veronii AMC35]
          Length = 142

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 13/130 (10%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
            +D   A G K+F  +  V+   V    G  G+   H P L  +KPG++ + +  G  + 
Sbjct: 8   HLDVVSAEG-KLF--SGRVQSAQVSGSEGELGLRHGHAPLLTAIKPGLVRLVKQNGTEEV 64

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSE 130
           +++S G + V  + SV ++A+ A   D LD + A++    A+  + S         A++E
Sbjct: 65  LYISGGMLEVQPE-SVTVLADTAIRADDLDEAKAQEAKRAAEERIHSSHGDIDYAQAATE 123

Query: 131 TAKAEAQIAV 140
            AKA AQ+ V
Sbjct: 124 LAKAMAQLRV 133


>gi|384870652|ref|YP_005753366.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           T0131]
 gi|424786091|ref|ZP_18212884.1| ATP synthase epsilon chain [Staphylococcus aureus CN79]
 gi|329314787|gb|AEB89200.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           T0131]
 gi|421955617|gb|EKU07953.1| ATP synthase epsilon chain [Staphylococcus aureus CN79]
          Length = 134

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           ++  + + N   Y   NV+ V + + +G  G++  H+PT+A LK G + V   +G ++ I
Sbjct: 4   LNLDIVTPNGSAYNRDNVELVVMQTTAGEIGVMSGHIPTVAALKTGFVKVKFHDG-TEYI 62

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
            VS G + V  D  V II + A     +D   A+   ++A+S L +    T    A+ A+
Sbjct: 63  AVSDGFVEVRKD-KVSIIVQTAETAREIDVERAKLAKARAESHLENDDDNTDIHRAERAL 121

Query: 141 EVA 143
           E A
Sbjct: 122 ERA 124


>gi|224477090|ref|YP_002634696.1| F0F1 ATP synthase subunit epsilon [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|254809383|sp|B9DME2.1|ATPE_STACT RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|222421697|emb|CAL28511.1| ATP synthase epsilon chain [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 135

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 64/129 (49%), Gaps = 3/129 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           M+  + + N   Y   NV+   + +  G  G++  H+PT+  +  G + V+ T+G+   I
Sbjct: 4   MNVNIVTPNGSVYNQDNVEITVLQTVGGDMGVMYGHIPTVTAIHTGYVKVHYTDGIDY-I 62

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
            VS G + +  + +  II + A   + +D   A     +A+S L++   +T    A+ A+
Sbjct: 63  AVSDGFVEIRQEKT-SIIVQTAEKAEDIDVRRAESAKERAESHLNNNDEDTDINRAKRAL 121

Query: 141 EVAE-ALKI 148
           E AE  LK+
Sbjct: 122 ERAENRLKV 130


>gi|397163103|ref|ZP_10486568.1| ATP synthase F1, epsilon subunit [Enterobacter radicincitans DSM
           16656]
 gi|396095250|gb|EJI92795.1| ATP synthase F1, epsilon subunit [Enterobacter radicincitans DSM
           16656]
          Length = 137

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 19  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQ-PGTVTV 77

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  + +         AS+E AKA A++ V
Sbjct: 78  LADTAIRGQDLDEARALESKRKAEEHIKASHGDVDYAQASAELAKAIAKLRV 129


>gi|28899842|ref|NP_799447.1| F0F1 ATP synthase subunit epsilon [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153839886|ref|ZP_01992553.1| ATP synthase F1, epsilon subunit [Vibrio parahaemolyticus AQ3810]
 gi|260361992|ref|ZP_05774997.1| ATP synthase F1, epsilon subunit [Vibrio parahaemolyticus K5030]
 gi|260876521|ref|ZP_05888876.1| ATP synthase F1, epsilon subunit [Vibrio parahaemolyticus AN-5034]
 gi|260897422|ref|ZP_05905918.1| ATP synthase F1, epsilon subunit [Vibrio parahaemolyticus Peru-466]
 gi|260901307|ref|ZP_05909702.1| ATP synthase F1, epsilon subunit [Vibrio parahaemolyticus AQ4037]
 gi|417321594|ref|ZP_12108130.1| F0F1 ATP synthase subunit epsilon [Vibrio parahaemolyticus 10329]
 gi|433659157|ref|YP_007276536.1| ATP synthase epsilon chain [Vibrio parahaemolyticus BB22OP]
 gi|31339962|sp|Q87KA9.1|ATPE_VIBPA RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|28808094|dbj|BAC61331.1| ATP synthase F1, epsilon subunit [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149746594|gb|EDM57582.1| ATP synthase F1, epsilon subunit [Vibrio parahaemolyticus AQ3810]
 gi|308087906|gb|EFO37601.1| ATP synthase F1, epsilon subunit [Vibrio parahaemolyticus Peru-466]
 gi|308090371|gb|EFO40066.1| ATP synthase F1, epsilon subunit [Vibrio parahaemolyticus AN-5034]
 gi|308109902|gb|EFO47442.1| ATP synthase F1, epsilon subunit [Vibrio parahaemolyticus AQ4037]
 gi|308114169|gb|EFO51709.1| ATP synthase F1, epsilon subunit [Vibrio parahaemolyticus K5030]
 gi|328471194|gb|EGF42096.1| F0F1 ATP synthase subunit epsilon [Vibrio parahaemolyticus 10329]
 gi|432509845|gb|AGB11362.1| ATP synthase epsilon chain [Vibrio parahaemolyticus BB22OP]
          Length = 140

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 10/113 (8%)

Query: 37  NVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQ 96
            V+   V    G  GI   H P L+ +KPG++ + +  G  + I+VS G + V   ++  
Sbjct: 21  RVETFQVTGSEGELGIFHGHTPLLSAIKPGMVRIVKQHGHEEFIYVSGGMVEVQPGTAT- 79

Query: 97  IIAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           ++A+ A   + LDA+ A +   +A+ ++ +         A+SE AKA AQ+ V
Sbjct: 80  VLADTAIRGEDLDAAKAEEAKRRAEEKIQNQHGDMDFAQAASELAKAIAQLRV 132


>gi|282600456|ref|ZP_05974352.2| ATP synthase F1, epsilon subunit [Providencia rustigianii DSM 4541]
 gi|282565108|gb|EFB70643.1| ATP synthase F1, epsilon subunit [Providencia rustigianii DSM 4541]
          Length = 141

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 11/127 (8%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
            T+ S  K  + +  V++V V    G  GI P H P L  +KPG++ + +  G  + I++
Sbjct: 9   LTVVSAEKQMF-DGRVQKVQVTGSEGELGIYPQHTPLLTAIKPGMVRITKQFGEEELIYL 67

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSEL---------SSASSETAK 133
           S G + V   + V ++A+ A     LD + A +   KA+  +         + AS+E AK
Sbjct: 68  SGGILEVQ-PTGVIVLADTAIRGKDLDEARAVEAKRKAEEHIRKAHGDVDYAQASAELAK 126

Query: 134 AEAQIAV 140
           A A++ V
Sbjct: 127 AIAKLRV 133


>gi|351733121|ref|ZP_08950812.1| F0F1 ATP synthase subunit epsilon [Acidovorax radicis N35]
          Length = 138

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 5/113 (4%)

Query: 41  VDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAE 100
           V +P  +G  GI P H P +  +KPG + +   +G  + +FV+ G + V  +  V ++++
Sbjct: 23  VALPGEAGELGIYPRHTPLITRIKPGSVRIEMADGSEEFVFVAGGILEVQPN-CVTVLSD 81

Query: 101 EAHPVDSLDASAARDVLSKAQSELSSASSET--AKAEAQIAVEVAE--ALKIF 149
            A     LD   A    + A+  L +A SE   AKA++++AV  A+  AL+ F
Sbjct: 82  TAIRGKDLDDEKANAAKASAEEALKNAKSEIDLAKAQSELAVMAAQIAALRKF 134


>gi|357634836|ref|ZP_09132714.1| ATP synthase F1, epsilon subunit [Desulfovibrio sp. FW1012B]
 gi|357583390|gb|EHJ48723.1| ATP synthase F1, epsilon subunit [Desulfovibrio sp. FW1012B]
          Length = 139

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 2/89 (2%)

Query: 36  QNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSV 95
           Q+V  V  P   G FG++ NH+P L+ L  G + +Y+  G +  +FVS G   V+ +  V
Sbjct: 18  QDVDYVGAPGLLGEFGVMANHIPFLSALGIGSL-MYKVGGKANYVFVSGGFAEVSGN-KV 75

Query: 96  QIIAEEAHPVDSLDASAARDVLSKAQSEL 124
            I+AE A   + +D   AR    +A+  L
Sbjct: 76  TILAEVAERPEDIDVERARKAQDRAKQRL 104


>gi|260774961|ref|ZP_05883861.1| ATP synthase epsilon chain [Vibrio coralliilyticus ATCC BAA-450]
 gi|260609051|gb|EEX35210.1| ATP synthase epsilon chain [Vibrio coralliilyticus ATCC BAA-450]
          Length = 140

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 12/121 (9%)

Query: 29  NKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTIT 88
            K+F  +  V+   V    G  GI   H P L  +KPG++ + +  G  + I+VS G + 
Sbjct: 15  KKIF--SGRVETFQVTGSEGELGIFHGHTPLLTAIKPGMVRIVKQHGHEEIIYVSGGMVE 72

Query: 89  VNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQS---------ELSSASSETAKAEAQIA 139
           V   ++  ++A+ A   + LDA+ A +   +A+          + + A+SE AKA AQ+ 
Sbjct: 73  VQPGTAT-VLADTAIRGEELDAAKAEEAKRRAEESIQNQHGDMDFAQAASELAKAIAQLR 131

Query: 140 V 140
           V
Sbjct: 132 V 132


>gi|51891230|ref|YP_073921.1| ATP synthase subunit epsilon [Symbiobacterium thermophilum IAM
           14863]
 gi|60389545|sp|Q67TB6.1|ATPE_SYMTH RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|51854919|dbj|BAD39077.1| ATP synthase epsilon subunit [Symbiobacterium thermophilum IAM
           14863]
          Length = 139

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 55/96 (57%), Gaps = 2/96 (2%)

Query: 48  GAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDS 107
           G+ GIL NH P +A L+ GV+  Y+ +GV +++ V+ G + V+++  + ++A+ A   +S
Sbjct: 31  GSMGILKNHAPMVANLRIGVLR-YKQDGVYKRVAVTGGFVEVSEN-RITVLADAAELAES 88

Query: 108 LDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
           +D   A +   +A++ L    +   +  A+ A+  A
Sbjct: 89  IDVMRAMEAKRRAEARLRDRKANIDRTRAEAALRRA 124


>gi|346993678|ref|ZP_08861750.1| F0F1 ATP synthase subunit epsilon [Ruegeria sp. TW15]
          Length = 136

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 8/118 (6%)

Query: 17  YADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGV 76
            A+ M F L S  +   + +    V +P   G    +P+H PT+  L+PG++ V    G 
Sbjct: 1   MANTMQFDLVSPERSLASLE-ATAVQIPGADGDMTAMPDHAPTITTLRPGILKVEAPAGA 59

Query: 77  SQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKA 134
           S+ + V+ G   +N D  + ++AE+A PV  +  S   D++++A+     AS E AKA
Sbjct: 60  SEYL-VTGGFAQINGD-GLSVLAEKAIPVAEVTRSHMDDLIAEAR-----ASHEAAKA 110


>gi|21672303|ref|NP_660370.1| F0F1 ATP synthase subunit epsilon [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|4033369|sp|O51871.1|ATPE_BUCAP RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|2827017|gb|AAC38109.1| ATP synthase subunit epsilon [Buchnera aphidicola]
 gi|21622901|gb|AAM67581.1| ATP synthase epsilon chain [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 138

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 6/128 (4%)

Query: 21  MDFTL--ASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQ 78
           MDF L   S  K  ++   V ++ V    G  GI P H   L+I+KPGVI ++      +
Sbjct: 1   MDFYLDIVSVEKRIFSGL-VDRIQVSGSEGEMGIYPGHTQLLSIIKPGVIYIFHKNKTEE 59

Query: 79  KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQI 138
            +++S G + V   S V I+A+ A  +  +D    R V +K Q+E       T   +  +
Sbjct: 60  CLYISGGILEVQ-PSVVSILADVA--IRGIDLDRKRVVKAKKQAEEYFKKETTNVKKDDV 116

Query: 139 AVEVAEAL 146
            +E+++A+
Sbjct: 117 LLEISKAI 124


>gi|387891218|ref|YP_006321516.1| membrane-bound ATP synthase [Escherichia blattae DSM 4481]
 gi|414595046|ref|ZP_11444677.1| ATP synthase epsilon chain [Escherichia blattae NBRC 105725]
 gi|386926051|gb|AFJ49005.1| membrane-bound ATP synthase [Escherichia blattae DSM 4481]
 gi|403193966|dbj|GAB82329.1| ATP synthase epsilon chain [Escherichia blattae NBRC 105725]
          Length = 139

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V    +V +
Sbjct: 21  VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQFGHEEFIYLSGGVLEVQ-PGNVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  + S         AS+E AKA A++ V
Sbjct: 80  LADTAIRGQDLDEARALESKRKAEEHIRSSHGDVDYAQASAELAKAIAKLRV 131


>gi|254459593|ref|ZP_05073009.1| ATP synthase F1, epsilon subunit [Rhodobacterales bacterium
           HTCC2083]
 gi|206676182|gb|EDZ40669.1| ATP synthase F1, epsilon subunit [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 138

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 11/142 (7%)

Query: 17  YADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGV 76
            AD + F L S  +   + Q V +V +P   G    + +H PT+  L+PGV+ V    G 
Sbjct: 1   MADTLQFDLVSPERSLASMQ-VSEVQIPGSDGDMTAMADHAPTITTLRPGVLKVSGPAGD 59

Query: 77  SQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDAS-------AARDVLSKAQSELSSASS 129
           ++  +V +G      D  + ++AE A     +D +       AA D   KAQ   S    
Sbjct: 60  AE--YVVTGGFAEIGDGGISVLAERAIAKADMDQATLKSMIDAATDAFEKAQDAKSEGVD 117

Query: 130 ETAKAEAQIAVEVAEALKIFVS 151
           + AKA A + V + +AL I V+
Sbjct: 118 DAAKALADV-VAIGDALGISVN 138


>gi|220927117|ref|YP_002502419.1| F0F1 ATP synthase subunit epsilon [Methylobacterium nodulans ORS
           2060]
 gi|219951724|gb|ACL62116.1| ATP synthase F1, epsilon subunit [Methylobacterium nodulans ORS
           2060]
          Length = 133

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 2/86 (2%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
           F L    +V Y+   V  V +P   G   +LP H P L  LK GV+ + E     +++ V
Sbjct: 6   FDLVGPERVLYSGP-VDAVQLPGSEGEMTVLPGHAPVLTTLKTGVLVITEGPQHGKRVLV 64

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSL 108
             G   +N  + + +IAE A PV+ L
Sbjct: 65  RGGFAEIN-ATGLTVIAERATPVEEL 89


>gi|423204683|ref|ZP_17191239.1| ATP synthase epsilon chain [Aeromonas veronii AMC34]
 gi|404626007|gb|EKB22818.1| ATP synthase epsilon chain [Aeromonas veronii AMC34]
          Length = 142

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 13/130 (10%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
            +D   A G K+F  +  V+   V    G  G+   H P L  +KPG++ + +  G  + 
Sbjct: 8   HLDVVSAEG-KLF--SGRVQTAQVSGSEGELGLRHGHAPLLTAIKPGLVRLVKQNGTEEV 64

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSE 130
           +++S G + V  + SV ++A+ A   D LD + A++    A+  + S         A++E
Sbjct: 65  LYISGGMLEVQPE-SVTVLADTAIRADDLDEAKAQEAKRAAEERIHSSHGDIDYAQAATE 123

Query: 131 TAKAEAQIAV 140
            AKA AQ+ V
Sbjct: 124 LAKAMAQLRV 133


>gi|332285685|ref|YP_004417596.1| hypothetical protein PT7_2432 [Pusillimonas sp. T7-7]
 gi|330429638|gb|AEC20972.1| hypothetical protein PT7_2432 [Pusillimonas sp. T7-7]
          Length = 141

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  SG  GILP H P ++ ++PG + + + +G    IFV+ G + +    +V ++
Sbjct: 21  KFVALPGESGELGILPGHTPLISRIRPGTVKIVQEDGSEVSIFVAGGILEIQ-PGTVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           ++ A   + LD + A +   +A+  L +      K +A IAV
Sbjct: 80  SDTAIRAEDLDEAKALEARKRAEETLRN-----TKDKADIAV 116


>gi|343499258|ref|ZP_08737241.1| F0F1 ATP synthase subunit epsilon [Vibrio tubiashii ATCC 19109]
 gi|418479463|ref|ZP_13048545.1| F0F1 ATP synthase subunit epsilon [Vibrio tubiashii NCIMB 1337 =
           ATCC 19106]
 gi|342823133|gb|EGU57789.1| F0F1 ATP synthase subunit epsilon [Vibrio tubiashii ATCC 19109]
 gi|384572974|gb|EIF03478.1| F0F1 ATP synthase subunit epsilon [Vibrio tubiashii NCIMB 1337 =
           ATCC 19106]
          Length = 140

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+   V    G  GI   H P L  +KPG++ + +  G  + I+VS G I V   ++  +
Sbjct: 22  VETFQVTGSEGELGIFHGHTPLLTAIKPGMVRIVKQHGHEEIIYVSGGMIEVQPGTAT-V 80

Query: 98  IAEEAHPVDSLDASAARDVLSKAQS---------ELSSASSETAKAEAQIAV 140
           +A+ A   + LDA+ A +   +A+          + + A+SE AKA AQ+ V
Sbjct: 81  LADTAIRGEELDAAKAEEAKRRAEESIHNQHGDMDFAQAASELAKAIAQLRV 132


>gi|220932615|ref|YP_002509523.1| ATP synthase F1 subunit epsilon [Halothermothrix orenii H 168]
 gi|254809368|sp|B8CZ09.1|ATPE_HALOH RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|219993925|gb|ACL70528.1| ATP synthase F1, epsilon subunit [Halothermothrix orenii H 168]
          Length = 134

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 2/85 (2%)

Query: 44  PSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAH 103
           P+  G  GILP H P +  LK GV+ V + +G   KI +S G + V  D  + +I   A 
Sbjct: 27  PAIDGEIGILPKHTPLVTGLKTGVMRV-KKDGEEVKISISEGFMEVKPD-EINVIVRTAE 84

Query: 104 PVDSLDASAARDVLSKAQSELSSAS 128
               +D   ARD L +A+  L+S +
Sbjct: 85  LPHEIDVERARDALKRAEKRLNSRN 109


>gi|98971623|gb|ABF59714.1| ATP synthase protein epsilon subunit [Rhizobium leguminosarum bv.
           trifolii TA1]
          Length = 135

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 2/120 (1%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           AD  +F L S  ++  + + V +V +P+  G   ++ NH PT+  +KPGV++V    G  
Sbjct: 2   ADNFNFELVSPERLLLS-EMVTEVVIPATEGEMTVMANHAPTMTTIKPGVVSVRSASGKK 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           Q   V  G   +   +   ++AE A PV+ L        +  A+ EL  A     K++ +
Sbjct: 61  QDYVVFGGFADIL-PTGCTLLAESAVPVEELQKDELTRRIEAARLELEHAELHEHKSKLE 119


>gi|403050522|ref|ZP_10905006.1| F0F1 ATP synthase subunit epsilon [Acinetobacter bereziniae LMG
           1003]
 gi|445418160|ref|ZP_21434791.1| ATP synthase F1, epsilon subunit [Acinetobacter sp. WC-743]
 gi|444760849|gb|ELW85278.1| ATP synthase F1, epsilon subunit [Acinetobacter sp. WC-743]
          Length = 139

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 1/84 (1%)

Query: 47  SGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVD 106
            G  GI+P H P + +LKPG I V    G  + I+VS G + V     V ++A+ A   D
Sbjct: 29  GGELGIMPGHAPLVTLLKPGAIRVLLENGTEELIYVSGGVLEVQ-PHVVTVLADTAVRAD 87

Query: 107 SLDASAARDVLSKAQSELSSASSE 130
           +LD +A  +    A+  L++  S+
Sbjct: 88  NLDEAAILEARKNAEQLLANQKSD 111


>gi|312794896|ref|YP_004027818.1| ATP synthase subunit epsilon [Burkholderia rhizoxinica HKI 454]
 gi|312166671|emb|CBW73674.1| ATP synthase epsilon chain (EC 3.6.3.14) [Burkholderia rhizoxinica
           HKI 454]
          Length = 164

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 3/110 (2%)

Query: 37  NVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQ 96
           + + V +P  +G  GILP H P +  ++PG + + +  G  Q +FV+ G + V    +V 
Sbjct: 42  HARFVALPGEAGELGILPGHTPLITRIRPGSVRIEDENGDEQFVFVAGGILEVQ-PGAVT 100

Query: 97  IIAEEAHPVDSLDASAARDVLSKAQSELSSASS--ETAKAEAQIAVEVAE 144
           ++A+ A     LD + A     +A+  L +  S  E A A+A++A   A+
Sbjct: 101 VLADTAIRGAELDEAKAEQARKRAEEALQNTDSNLEYATAQAELAYATAQ 150


>gi|291327303|ref|ZP_06127734.2| ATP synthase F1, epsilon subunit [Providencia rettgeri DSM 1131]
 gi|291310936|gb|EFE51389.1| ATP synthase F1, epsilon subunit [Providencia rettgeri DSM 1131]
          Length = 141

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 15/129 (11%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
            T+ S  K  +    V+++ V    G  GI P H P L  +KPG++ + +  G  + I++
Sbjct: 9   LTVVSAEKQMFEGM-VQKIQVTGSEGELGIYPQHTPLLTAIKPGMVRITKQFGEEELIYL 67

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSE-----------LSSASSET 131
           S G + V  +  + ++A+ A  +   D   AR V SK ++E            + AS+E 
Sbjct: 68  SGGILEVQPNGVI-VLADTA--IRGKDLDEARAVESKRKAEEHVRKAHGDVDYAQASAEL 124

Query: 132 AKAEAQIAV 140
           AKA A++ V
Sbjct: 125 AKAIAKLRV 133


>gi|163803595|ref|ZP_02197461.1| F0F1 ATP synthase subunit epsilon [Vibrio sp. AND4]
 gi|159172589|gb|EDP57447.1| F0F1 ATP synthase subunit epsilon [Vibrio sp. AND4]
          Length = 140

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 10/113 (8%)

Query: 37  NVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQ 96
            V+   V    G  GI   H P L+ +KPG++ + +  G  + I+VS G + V   ++  
Sbjct: 21  RVETFQVTGSEGELGIFHGHTPLLSAIKPGMVRIVKQHGHEEFIYVSGGMVEVQPGTAT- 79

Query: 97  IIAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           ++A+ A   + LDA+ A +   +A+ ++ +         A+SE AKA AQ+ V
Sbjct: 80  VLADTAIRGEDLDAAKAEEAKRRAEEKIQNQHGDMDFAQAASELAKAIAQLRV 132


>gi|145632745|ref|ZP_01788479.1| F0F1 ATP synthase subunit epsilon [Haemophilus influenzae 3655]
 gi|145634524|ref|ZP_01790233.1| ATP synthase subunit epsilon [Haemophilus influenzae PittAA]
 gi|144986940|gb|EDJ93492.1| F0F1 ATP synthase subunit epsilon [Haemophilus influenzae 3655]
 gi|145268069|gb|EDK08064.1| ATP synthase subunit epsilon [Haemophilus influenzae PittAA]
          Length = 142

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 2/110 (1%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
            + T+ S  +  +  + VKQ+      G  GILP H P L  +KPG++     +G  + I
Sbjct: 4   FNLTIVSAEQKIFEGE-VKQIQATGVEGELGILPGHTPLLTAIKPGIVKFTLKDGNEEVI 62

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
           +VS G + V  +  V ++A+ A     LDA    +   KA+  + S  S+
Sbjct: 63  YVSGGFLEVQPN-IVTVLADIAIRGSELDADRIYEAKRKAEENIVSHGSD 111


>gi|418738127|ref|ZP_13294523.1| ATP synthase F1, epsilon subunit [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
 gi|410746301|gb|EKQ99208.1| ATP synthase F1, epsilon subunit [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
          Length = 127

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 62/114 (54%), Gaps = 4/114 (3%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           A +++ ++ S  K+ Y  + V  + VP   G FGILPNH P +A L  GV+ + + E + 
Sbjct: 3   AHKLNVSVISPEKILYKGE-VDSLVVPGSEGFFGILPNHAPLVATLGIGVLEIRKGEKL- 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSET 131
           + I V  G I V D+ +V I+ +     + +D  A +  L++ + +LS + S+ 
Sbjct: 61  KNISVEGGFIEVKDN-TVSILTDHGALKEDIDIEAEKKALAEVE-KLSPSDSKN 112


>gi|27364455|ref|NP_759983.1| ATP synthase F0F1 subunit epsilon [Vibrio vulnificus CMCP6]
 gi|37681434|ref|NP_936043.1| F0F1 ATP synthase subunit epsilon [Vibrio vulnificus YJ016]
 gi|320154859|ref|YP_004187238.1| ATP synthase subunit epsilon [Vibrio vulnificus MO6-24/O]
 gi|31339983|sp|Q8DDG7.1|ATPE_VIBVU RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|60389703|sp|Q7MGI1.1|ATPE_VIBVY RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|27360574|gb|AAO09510.1| ATP synthase F1, epsilon subunit [Vibrio vulnificus CMCP6]
 gi|37200186|dbj|BAC96014.1| F0F1-type ATP synthase epsilon subunit [Vibrio vulnificus YJ016]
 gi|319930171|gb|ADV85035.1| ATP synthase epsilon chain [Vibrio vulnificus MO6-24/O]
          Length = 140

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 12/121 (9%)

Query: 29  NKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTIT 88
            K+F  +  V+   V    G  GI   H P L  +KPG++ + +  G  + I+VS G + 
Sbjct: 15  KKIF--SGRVETFQVTGSEGELGIFHGHTPLLTAIKPGMVRIVKLHGEEEFIYVSGGIVE 72

Query: 89  VNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQS---------ELSSASSETAKAEAQIA 139
           V   ++  ++A+ A   + LDA+ A +   +A+          + + A+SE AKA AQ+ 
Sbjct: 73  VQPGTAT-VLADTAIRGEELDAAKAEEAKRRAKENILNQHGDMDFAQAASELAKAIAQLR 131

Query: 140 V 140
           V
Sbjct: 132 V 132


>gi|418356625|ref|ZP_12959341.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-61A1]
 gi|419831192|ref|ZP_14354673.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-1A2]
 gi|419834876|ref|ZP_14358328.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-61A2]
 gi|421318792|ref|ZP_15769356.1| ATP synthase F1, epsilon subunit [Vibrio cholerae CP1038(11)]
 gi|423158690|ref|ZP_17145676.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-33A2]
 gi|423844961|ref|ZP_17718507.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-59A1]
 gi|424620389|ref|ZP_18058936.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-47A1]
 gi|424655094|ref|ZP_18092411.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-81A2]
 gi|443528952|ref|ZP_21094975.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-7A1]
 gi|356450797|gb|EHI03507.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-61A1]
 gi|356451417|gb|EHI04102.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-33A2]
 gi|395926545|gb|EJH37323.1| ATP synthase F1, epsilon subunit [Vibrio cholerae CP1038(11)]
 gi|395977661|gb|EJH87065.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-47A1]
 gi|408058343|gb|EKG93146.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-81A2]
 gi|408619086|gb|EKK92128.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-1A2]
 gi|408646415|gb|EKL18020.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-59A1]
 gi|408648355|gb|EKL19705.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-61A2]
 gi|443460215|gb|ELT27603.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-7A1]
          Length = 130

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+   V    G  GI   H P L  +KPG++ + +  G  + I+VS G + V   ++  +
Sbjct: 12  VETFQVTGSEGELGIFHGHTPLLTAIKPGMVRIVKLHGHEEYIYVSGGIVEVQPGTAT-V 70

Query: 98  IAEEAHPVDSLDASAARDVLSKAQS---------ELSSASSETAKAEAQIAV 140
           +A+ A   + LDA+ A +   +A+          + + A+SE AKA AQ+ V
Sbjct: 71  LADTAIRGEDLDAAKAEEAKRRAEERILNQHGDMDFAQAASELAKAIAQLRV 122


>gi|422006843|ref|ZP_16353831.1| membrane-bound ATP synthase, F1 sector subunit epsilon [Providencia
           rettgeri Dmel1]
 gi|414098034|gb|EKT59684.1| membrane-bound ATP synthase, F1 sector subunit epsilon [Providencia
           rettgeri Dmel1]
          Length = 137

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 15/129 (11%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
            T+ S  K  +    V+++ V    G  GI P H P L  +KPG++ + +  G  + I++
Sbjct: 5   LTVVSAEKQMFEGM-VQKIQVTGSEGELGIYPQHTPLLTAIKPGMVRITKQFGEEELIYL 63

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSE-----------LSSASSET 131
           S G + V  +  + ++A+ A  +   D   AR V SK ++E            + AS+E 
Sbjct: 64  SGGILEVQPNGVI-VLADTA--IRGKDLDEARAVESKRKAEEHVRKAHGDVDYAQASAEL 120

Query: 132 AKAEAQIAV 140
           AKA A++ V
Sbjct: 121 AKAIAKLRV 129


>gi|107025848|ref|YP_623359.1| ATP synthase F1 subunit epsilon [Burkholderia cenocepacia AU 1054]
 gi|119361401|sp|Q1BPR9.1|ATPE2_BURCA RecName: Full=ATP synthase epsilon chain 2; AltName: Full=ATP
           synthase F1 sector epsilon subunit 2; AltName:
           Full=F-ATPase epsilon subunit 2
 gi|105895222|gb|ABF78386.1| ATP synthase F1 subcomplex epsilon subunit [Burkholderia
           cenocepacia AU 1054]
          Length = 152

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 4/112 (3%)

Query: 43  VPSFSGAFGILPNHVPTLAILKPGVITVYETE-GVSQKIFVSSGTITVNDDSSVQIIAEE 101
           VP  SG  GI P+H P L  ++PGV+T+ +   G  +++ V+ G + V+ D  V +IA+ 
Sbjct: 26  VPGESGELGIYPHHAPLLTRIRPGVVTLVDAPTGEHRRLLVAGGVLEVSRD-GVTLIADH 84

Query: 102 AHPVDSLDASAARDVLSKAQSELSSASSETAKA--EAQIAVEVAEALKIFVS 151
           A     LD    R+    A       + E  +A   A    E+ E ++ F +
Sbjct: 85  ALRTPELDELRTREARHAADDWRQRYAHENRRAFDFASARAELMEEIRRFFA 136


>gi|337277981|ref|YP_004617452.1| F-ATPase subunit epsilon [Ramlibacter tataouinensis TTB310]
 gi|334729057|gb|AEG91433.1| Candidate F-ATPase, epsilon chain [Ramlibacter tataouinensis
           TTB310]
          Length = 142

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 3/106 (2%)

Query: 41  VDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAE 100
           V +P  +G  GI P H P +  ++PG + + + +G  + +FV+ G + V  +  V ++++
Sbjct: 27  VALPGEAGELGIYPRHTPLITRVRPGSVRIEKADGGEEFVFVAGGILEVQPN-RVTVLSD 85

Query: 101 EAHPVDSLDASAARDVLSKAQSELSSASSE--TAKAEAQIAVEVAE 144
            A     LD   A +    A+  L +A SE   AKA++++AV  A+
Sbjct: 86  TAIRGKDLDEQKATEARQAAEEALKNAKSEIDIAKAQSELAVMAAQ 131


>gi|398827801|ref|ZP_10586004.1| ATP synthase, F1 epsilon subunit [Phyllobacterium sp. YR531]
 gi|398219099|gb|EJN05596.1| ATP synthase, F1 epsilon subunit [Phyllobacterium sp. YR531]
          Length = 135

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 2/120 (1%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           A+   F L S  ++  + Q V +V VP   G   +L +H P +A +KPGV+TV   +G  
Sbjct: 2   AEAFQFELVSPERLLLSEQ-VIEVVVPGTEGYMTVLAHHAPLMATIKPGVVTVKTPDGKP 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
               V  G + V  +  + ++AE A  V  + A   ++ +  A+ +   A++   K+ A+
Sbjct: 61  DSYVVFGGFVDVTPEGCI-LLAESAVHVTDIKADELQNRIKDAKEDFEDATTREEKSRAE 119


>gi|238783023|ref|ZP_04627050.1| ATP synthase epsilon chain [Yersinia bercovieri ATCC 43970]
 gi|238797872|ref|ZP_04641364.1| ATP synthase epsilon chain [Yersinia mollaretii ATCC 43969]
 gi|238716024|gb|EEQ08009.1| ATP synthase epsilon chain [Yersinia bercovieri ATCC 43970]
 gi|238718288|gb|EEQ10112.1| ATP synthase epsilon chain [Yersinia mollaretii ATCC 43969]
          Length = 140

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V   S V +
Sbjct: 22  VQKIQVTGSEGELGIFPGHAPLLTAIKPGMIRIVKQFGEEEFIYLSGGILEVQ-PSVVIV 80

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA++ +++         AS+E AKA A++ V
Sbjct: 81  LADTAIRGQDLDEAKALESKRKAEAHINNSHGDVDYAQASAELAKAIAKLRV 132


>gi|19703699|ref|NP_603261.1| ATP synthase subunit epsilon [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|22095472|sp|Q8RGE3.1|ATPE_FUSNN RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|19713823|gb|AAL94560.1| ATP synthase epsilon chain, sodium ion specific [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
          Length = 134

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 48/96 (50%)

Query: 48  GAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDS 107
           G  GILPNH P +A L  G + +       + I+  SG      D+   +IA+E  P++ 
Sbjct: 30  GDIGILPNHAPFVAELSMGKMEIESPNKDRRDIYFLSGGFLEISDNQATVIADEVFPIEK 89

Query: 108 LDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
           +D  + + ++   + EL   S+E  K + Q  ++++
Sbjct: 90  IDVESEQALVENLKKELEKVSTEEEKRKLQKKIKIS 125



 Score = 36.2 bits (82), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 17/71 (23%), Positives = 41/71 (57%), Gaps = 1/71 (1%)

Query: 149 FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 208
           F+S G + ++D+ +  +IA+E  P++ +D  + + ++   + EL   S+E  K + Q  +
Sbjct: 64  FLSGGFLEISDNQAT-VIADEVFPIEKIDVESEQALVENLKKELEKVSTEEEKRKLQKKI 122

Query: 209 EVAEALVAAAS 219
           +++ A + A +
Sbjct: 123 KISLAKIDAKN 133


>gi|113869572|ref|YP_728061.1| F0F1 ATP synthase subunit epsilon [Ralstonia eutropha H16]
 gi|123032573|sp|Q0K5M8.1|ATPE_RALEH RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|113528348|emb|CAJ94693.1| Membrane-bound ATP synthase, F1 sector,epsilon-subunit [Ralstonia
           eutropha H16]
          Length = 138

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 1/99 (1%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  SG  GILP H P +  ++PG + + + +G  + +FV+ G + V     V ++
Sbjct: 21  KFVALPGESGELGILPGHTPLITRIQPGAVRIEKEDGSEEFVFVAGGILEVQ-PKHVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           A+ A     LD + A++    A+  + + SS+   A AQ
Sbjct: 80  ADTAIRGGDLDEAKAQEAKRAAEELMQNQSSDLDLARAQ 118


>gi|205375346|ref|ZP_03228136.1| F0F1 ATP synthase subunit epsilon [Bacillus coahuilensis m4-4]
          Length = 134

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 5/117 (4%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIF-VSSGTITVNDDSSVQ 96
           V+ V   + SG  GILP H+P +A L+ G + +    G  Q++  V+ G I V  D  V 
Sbjct: 20  VEMVSTKAQSGELGILPGHIPMVAPLQIGAVRL--KNGAKQELVAVTGGFIEVRPDQ-VT 76

Query: 97  IIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEALKIFVSSG 153
           I+A+ A   +S+D + A + L +AQ  L +       + A++A++ A   +I V SG
Sbjct: 77  ILAQAAETAESIDVARANEALRRAQERLQAKQDNVDFSRAELALKRAMN-RIDVGSG 132


>gi|15642756|ref|NP_232389.1| ATP synthase F0F1 subunit epsilon [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121591161|ref|ZP_01678466.1| ATP synthase F1, epsilon subunit [Vibrio cholerae 2740-80]
 gi|121729385|ref|ZP_01682052.1| ATP synthase F1, epsilon subunit [Vibrio cholerae V52]
 gi|147675059|ref|YP_001218422.1| F0F1 ATP synthase subunit epsilon [Vibrio cholerae O395]
 gi|153212936|ref|ZP_01948530.1| ATP synthase F1, epsilon subunit [Vibrio cholerae 1587]
 gi|153803375|ref|ZP_01957961.1| ATP synthase F1, epsilon subunit [Vibrio cholerae MZO-3]
 gi|153820053|ref|ZP_01972720.1| ATP synthase F1, epsilon subunit [Vibrio cholerae NCTC 8457]
 gi|153823460|ref|ZP_01976127.1| ATP synthase F1, epsilon subunit [Vibrio cholerae B33]
 gi|153827200|ref|ZP_01979867.1| ATP synthase F1, epsilon subunit [Vibrio cholerae MZO-2]
 gi|227082875|ref|YP_002811426.1| F0F1 ATP synthase subunit epsilon [Vibrio cholerae M66-2]
 gi|227116559|ref|YP_002818455.1| ATP synthase F1, epsilon subunit [Vibrio cholerae O395]
 gi|229508276|ref|ZP_04397780.1| ATP synthase epsilon chain [Vibrio cholerae BX 330286]
 gi|229508628|ref|ZP_04398123.1| ATP synthase epsilon chain [Vibrio cholerae B33]
 gi|229515970|ref|ZP_04405427.1| ATP synthase epsilon chain [Vibrio cholerae TMA 21]
 gi|229517156|ref|ZP_04406602.1| ATP synthase epsilon chain [Vibrio cholerae RC9]
 gi|229520152|ref|ZP_04409579.1| ATP synthase epsilon chain [Vibrio cholerae TM 11079-80]
 gi|229524892|ref|ZP_04414297.1| ATP synthase epsilon chain [Vibrio cholerae bv. albensis VL426]
 gi|229530224|ref|ZP_04419613.1| ATP synthase epsilon chain [Vibrio cholerae 12129(1)]
 gi|229606550|ref|YP_002877198.1| F0F1 ATP synthase subunit epsilon [Vibrio cholerae MJ-1236]
 gi|254291149|ref|ZP_04961946.1| ATP synthase F1, epsilon subunit [Vibrio cholerae AM-19226]
 gi|254851554|ref|ZP_05240904.1| H+-transporting two-sector ATPase [Vibrio cholerae MO10]
 gi|255746827|ref|ZP_05420773.1| ATP synthase epsilon chain [Vibrio cholera CIRS 101]
 gi|258623012|ref|ZP_05718026.1| ATP synthase subunit epsilon [Vibrio mimicus VM573]
 gi|258625010|ref|ZP_05719933.1| ATP synthase subunit epsilon [Vibrio mimicus VM603]
 gi|261213284|ref|ZP_05927566.1| ATP synthase epsilon chain [Vibrio sp. RC341]
 gi|262155907|ref|ZP_06029029.1| ATP synthase epsilon chain [Vibrio cholerae INDRE 91/1]
 gi|262166761|ref|ZP_06034498.1| ATP synthase epsilon chain [Vibrio mimicus VM223]
 gi|262167079|ref|ZP_06034794.1| ATP synthase epsilon chain [Vibrio cholerae RC27]
 gi|262172740|ref|ZP_06040418.1| ATP synthase epsilon chain [Vibrio mimicus MB-451]
 gi|262190642|ref|ZP_06048877.1| ATP synthase epsilon chain [Vibrio cholerae CT 5369-93]
 gi|262402103|ref|ZP_06078667.1| ATP synthase epsilon chain [Vibrio sp. RC586]
 gi|297581992|ref|ZP_06943912.1| predicted protein [Vibrio cholerae RC385]
 gi|298501173|ref|ZP_07010972.1| ATP synthase F1, epsilon subunit [Vibrio cholerae MAK 757]
 gi|360036786|ref|YP_004938549.1| F0F1 ATP synthase subunit epsilon [Vibrio cholerae O1 str.
           2010EL-1786]
 gi|379742531|ref|YP_005334500.1| F0F1 ATP synthase subunit epsilon [Vibrio cholerae IEC224]
 gi|384425678|ref|YP_005635036.1| ATP synthase subunit epsilon [Vibrio cholerae LMA3984-4]
 gi|417811072|ref|ZP_12457740.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-49A2]
 gi|417814824|ref|ZP_12461468.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HCUF01]
 gi|417818591|ref|ZP_12465213.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HE39]
 gi|417822154|ref|ZP_12468756.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HE48]
 gi|418330700|ref|ZP_12941667.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-06A1]
 gi|418339164|ref|ZP_12948056.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-23A1]
 gi|418342234|ref|ZP_12949055.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-28A1]
 gi|418347415|ref|ZP_12952157.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-43A1]
 gi|419824448|ref|ZP_14347961.1| ATP synthase F1, epsilon subunit [Vibrio cholerae CP1033(6)]
 gi|419834914|ref|ZP_14358364.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-46B1]
 gi|421315270|ref|ZP_15765846.1| ATP synthase F1, epsilon subunit [Vibrio cholerae CP1032(5)]
 gi|421322845|ref|ZP_15773380.1| ATP synthase F1, epsilon subunit [Vibrio cholerae CP1041(14)]
 gi|421326297|ref|ZP_15776818.1| ATP synthase F1, epsilon subunit [Vibrio cholerae CP1042(15)]
 gi|421330221|ref|ZP_15780709.1| ATP synthase F1, epsilon subunit [Vibrio cholerae CP1046(19)]
 gi|421333914|ref|ZP_15784388.1| ATP synthase F1, epsilon subunit [Vibrio cholerae CP1048(21)]
 gi|421337730|ref|ZP_15788174.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-20A2]
 gi|421341545|ref|ZP_15791956.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-43B1]
 gi|421345304|ref|ZP_15795694.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-46A1]
 gi|421348871|ref|ZP_15799242.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HE-25]
 gi|421352743|ref|ZP_15803083.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HE-45]
 gi|422308696|ref|ZP_16395839.1| ATP synthase F1, epsilon subunit [Vibrio cholerae CP1035(8)]
 gi|422897844|ref|ZP_16935276.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-40A1]
 gi|422904049|ref|ZP_16939004.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-48A1]
 gi|422907927|ref|ZP_16942715.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-70A1]
 gi|422911576|ref|ZP_16946194.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HE-09]
 gi|422911734|ref|ZP_16946283.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HFU-02]
 gi|422918600|ref|ZP_16952905.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-02A1]
 gi|422924053|ref|ZP_16957183.1| ATP synthase F1, epsilon subunit [Vibrio cholerae BJG-01]
 gi|422924200|ref|ZP_16957269.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-38A1]
 gi|423143266|ref|ZP_17130900.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-19A1]
 gi|423148246|ref|ZP_17135623.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-21A1]
 gi|423152035|ref|ZP_17139265.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-22A1]
 gi|423154826|ref|ZP_17141977.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-32A1]
 gi|423166276|ref|ZP_17152986.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-48B2]
 gi|423729356|ref|ZP_17702706.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-17A1]
 gi|423733252|ref|ZP_17706491.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-41B1]
 gi|423775166|ref|ZP_17713862.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-50A2]
 gi|423823493|ref|ZP_17717496.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-55C2]
 gi|423886463|ref|ZP_17724888.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-60A1]
 gi|423887661|ref|ZP_17724923.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-62A1]
 gi|423920131|ref|ZP_17729536.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-77A1]
 gi|423961681|ref|ZP_17735787.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HE-40]
 gi|423986038|ref|ZP_17739343.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HE-46]
 gi|423999014|ref|ZP_17742258.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-02C1]
 gi|424000536|ref|ZP_17743645.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-17A2]
 gi|424007512|ref|ZP_17750476.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-37A1]
 gi|424007553|ref|ZP_17750515.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-44C1]
 gi|424017917|ref|ZP_17757737.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-55B2]
 gi|424021005|ref|ZP_17760779.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-59B1]
 gi|424022499|ref|ZP_17762181.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-62B1]
 gi|424025518|ref|ZP_17765154.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-69A1]
 gi|424584890|ref|ZP_18024501.1| ATP synthase F1, epsilon subunit [Vibrio cholerae CP1030(3)]
 gi|424589264|ref|ZP_18028728.1| ATP synthase F1, epsilon subunit [Vibrio cholerae CP1037(10)]
 gi|424593516|ref|ZP_18032874.1| ATP synthase F1, epsilon subunit [Vibrio cholerae CP1040(13)]
 gi|424597445|ref|ZP_18036661.1| ATP synthase F1, epsilon subunit [Vibrio Cholerae CP1044(17)]
 gi|424600222|ref|ZP_18039395.1| ATP synthase F1, epsilon subunit [Vibrio cholerae CP1047(20)]
 gi|424605121|ref|ZP_18044107.1| ATP synthase F1, epsilon subunit [Vibrio cholerae CP1050(23)]
 gi|424608847|ref|ZP_18047724.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-39A1]
 gi|424611752|ref|ZP_18050579.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-41A1]
 gi|424615643|ref|ZP_18054353.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-42A1]
 gi|424626222|ref|ZP_18064674.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-50A1]
 gi|424630700|ref|ZP_18068976.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-51A1]
 gi|424634749|ref|ZP_18072841.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-52A1]
 gi|424637828|ref|ZP_18075827.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-55A1]
 gi|424641729|ref|ZP_18079603.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-56A1]
 gi|424643210|ref|ZP_18080985.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-56A2]
 gi|424649824|ref|ZP_18087478.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-57A1]
 gi|424651141|ref|ZP_18088682.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-57A2]
 gi|424657879|ref|ZP_18095153.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HE-16]
 gi|424810914|ref|ZP_18236248.1| F0F1 ATP synthase subunit epsilon [Vibrio mimicus SX-4]
 gi|429885473|ref|ZP_19367059.1| ATP synthase epsilon chain [Vibrio cholerae PS15]
 gi|440712085|ref|ZP_20892711.1| ATP synthase epsilon chain [Vibrio cholerae 4260B]
 gi|443502047|ref|ZP_21069056.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-64A1]
 gi|443505946|ref|ZP_21072762.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-65A1]
 gi|443509784|ref|ZP_21076475.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-67A1]
 gi|443513624|ref|ZP_21080186.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-68A1]
 gi|443517432|ref|ZP_21083875.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-71A1]
 gi|443522018|ref|ZP_21088285.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-72A2]
 gi|443528892|ref|ZP_21094918.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-78A1]
 gi|443536477|ref|ZP_21102339.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-80A1]
 gi|443536515|ref|ZP_21102375.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-81A1]
 gi|449054648|ref|ZP_21733316.1| ATP synthase epsilon chain [Vibrio cholerae O1 str. Inaba G4222]
 gi|449144937|ref|ZP_21775748.1| ATP synthase subunit epsilon [Vibrio mimicus CAIM 602]
 gi|20137514|sp|Q9KNH6.1|ATPE_VIBCH RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|9657364|gb|AAF95902.1| ATP synthase F1, epsilon subunit [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121546978|gb|EAX57123.1| ATP synthase F1, epsilon subunit [Vibrio cholerae 2740-80]
 gi|121628666|gb|EAX61138.1| ATP synthase F1, epsilon subunit [Vibrio cholerae V52]
 gi|124116162|gb|EAY34982.1| ATP synthase F1, epsilon subunit [Vibrio cholerae 1587]
 gi|124121099|gb|EAY39842.1| ATP synthase F1, epsilon subunit [Vibrio cholerae MZO-3]
 gi|126509410|gb|EAZ72004.1| ATP synthase F1, epsilon subunit [Vibrio cholerae NCTC 8457]
 gi|126519029|gb|EAZ76252.1| ATP synthase F1, epsilon subunit [Vibrio cholerae B33]
 gi|146316942|gb|ABQ21481.1| ATP synthase F1, epsilon subunit [Vibrio cholerae O395]
 gi|149738923|gb|EDM53247.1| ATP synthase F1, epsilon subunit [Vibrio cholerae MZO-2]
 gi|150422994|gb|EDN14944.1| ATP synthase F1, epsilon subunit [Vibrio cholerae AM-19226]
 gi|227010763|gb|ACP06975.1| ATP synthase F1, epsilon subunit [Vibrio cholerae M66-2]
 gi|227012009|gb|ACP08219.1| ATP synthase F1, epsilon subunit [Vibrio cholerae O395]
 gi|229332357|gb|EEN97844.1| ATP synthase epsilon chain [Vibrio cholerae 12129(1)]
 gi|229338473|gb|EEO03490.1| ATP synthase epsilon chain [Vibrio cholerae bv. albensis VL426]
 gi|229342746|gb|EEO07737.1| ATP synthase epsilon chain [Vibrio cholerae TM 11079-80]
 gi|229346219|gb|EEO11191.1| ATP synthase epsilon chain [Vibrio cholerae RC9]
 gi|229347070|gb|EEO12032.1| ATP synthase epsilon chain [Vibrio cholerae TMA 21]
 gi|229354342|gb|EEO19270.1| ATP synthase epsilon chain [Vibrio cholerae B33]
 gi|229354549|gb|EEO19471.1| ATP synthase epsilon chain [Vibrio cholerae BX 330286]
 gi|229369205|gb|ACQ59628.1| ATP synthase epsilon chain [Vibrio cholerae MJ-1236]
 gi|254847259|gb|EET25673.1| H+-transporting two-sector ATPase [Vibrio cholerae MO10]
 gi|255735584|gb|EET90983.1| ATP synthase epsilon chain [Vibrio cholera CIRS 101]
 gi|258582708|gb|EEW07534.1| ATP synthase subunit epsilon [Vibrio mimicus VM603]
 gi|258584715|gb|EEW09450.1| ATP synthase subunit epsilon [Vibrio mimicus VM573]
 gi|260837558|gb|EEX64261.1| ATP synthase epsilon chain [Vibrio sp. RC341]
 gi|261893816|gb|EEY39802.1| ATP synthase epsilon chain [Vibrio mimicus MB-451]
 gi|262024465|gb|EEY43151.1| ATP synthase epsilon chain [Vibrio cholerae RC27]
 gi|262026477|gb|EEY45145.1| ATP synthase epsilon chain [Vibrio mimicus VM223]
 gi|262030359|gb|EEY49001.1| ATP synthase epsilon chain [Vibrio cholerae INDRE 91/1]
 gi|262033480|gb|EEY51983.1| ATP synthase epsilon chain [Vibrio cholerae CT 5369-93]
 gi|262351749|gb|EEZ00881.1| ATP synthase epsilon chain [Vibrio sp. RC586]
 gi|297533859|gb|EFH72700.1| predicted protein [Vibrio cholerae RC385]
 gi|297540045|gb|EFH76107.1| ATP synthase F1, epsilon subunit [Vibrio cholerae MAK 757]
 gi|327485231|gb|AEA79638.1| ATP synthase epsilon chain [Vibrio cholerae LMA3984-4]
 gi|340044199|gb|EGR05152.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HE39]
 gi|340045996|gb|EGR06931.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HCUF01]
 gi|340046182|gb|EGR07113.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-49A2]
 gi|340049767|gb|EGR10679.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HE48]
 gi|341619053|gb|EGS44985.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-48A1]
 gi|341619176|gb|EGS45032.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-70A1]
 gi|341619508|gb|EGS45314.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-40A1]
 gi|341631268|gb|EGS56174.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HE-09]
 gi|341634654|gb|EGS59405.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-02A1]
 gi|341642157|gb|EGS66642.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HFU-02]
 gi|341642728|gb|EGS67041.1| ATP synthase F1, epsilon subunit [Vibrio cholerae BJG-01]
 gi|341649389|gb|EGS73366.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-38A1]
 gi|342321925|gb|EGU17721.1| F0F1 ATP synthase subunit epsilon [Vibrio mimicus SX-4]
 gi|356423334|gb|EHH76786.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-06A1]
 gi|356423991|gb|EHH77413.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-21A1]
 gi|356428032|gb|EHH81262.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-19A1]
 gi|356428717|gb|EHH81938.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-23A1]
 gi|356436184|gb|EHH89304.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-22A1]
 gi|356439133|gb|EHH92122.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-28A1]
 gi|356446855|gb|EHH99646.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-32A1]
 gi|356448277|gb|EHI01051.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-48B2]
 gi|356448847|gb|EHI01608.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-43A1]
 gi|356647940|gb|AET27995.1| F0F1 ATP synthase subunit epsilon [Vibrio cholerae O1 str.
           2010EL-1786]
 gi|378796041|gb|AFC59512.1| F0F1 ATP synthase subunit epsilon [Vibrio cholerae IEC224]
 gi|395924234|gb|EJH35040.1| ATP synthase F1, epsilon subunit [Vibrio cholerae CP1032(5)]
 gi|395925429|gb|EJH36227.1| ATP synthase F1, epsilon subunit [Vibrio cholerae CP1041(14)]
 gi|395936021|gb|EJH46751.1| ATP synthase F1, epsilon subunit [Vibrio cholerae CP1042(15)]
 gi|395936396|gb|EJH47120.1| ATP synthase F1, epsilon subunit [Vibrio cholerae CP1046(19)]
 gi|395938277|gb|EJH48971.1| ATP synthase F1, epsilon subunit [Vibrio cholerae CP1048(21)]
 gi|395948173|gb|EJH58826.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-43B1]
 gi|395948268|gb|EJH58919.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-20A2]
 gi|395948914|gb|EJH59549.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-46A1]
 gi|395956891|gb|EJH67480.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HE-45]
 gi|395957064|gb|EJH67649.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HE-25]
 gi|395965458|gb|EJH75627.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-56A2]
 gi|395965607|gb|EJH75770.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-57A2]
 gi|395967914|gb|EJH77938.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-42A1]
 gi|395979772|gb|EJH89097.1| ATP synthase F1, epsilon subunit [Vibrio cholerae CP1030(3)]
 gi|395980176|gb|EJH89465.1| ATP synthase F1, epsilon subunit [Vibrio cholerae CP1047(20)]
 gi|408010233|gb|EKG48104.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-50A1]
 gi|408011473|gb|EKG49283.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-39A1]
 gi|408016391|gb|EKG53939.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-52A1]
 gi|408018653|gb|EKG56086.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-41A1]
 gi|408021415|gb|EKG58670.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-56A1]
 gi|408021559|gb|EKG58803.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-55A1]
 gi|408030364|gb|EKG67030.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-57A1]
 gi|408038001|gb|EKG74361.1| ATP synthase F1, epsilon subunit [Vibrio cholerae CP1037(10)]
 gi|408038975|gb|EKG75284.1| ATP synthase F1, epsilon subunit [Vibrio cholerae CP1040(13)]
 gi|408046089|gb|EKG81805.1| ATP synthase F1, epsilon subunit [Vibrio Cholerae CP1044(17)]
 gi|408047860|gb|EKG83357.1| ATP synthase F1, epsilon subunit [Vibrio cholerae CP1050(23)]
 gi|408052533|gb|EKG87571.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-51A1]
 gi|408057307|gb|EKG92159.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HE-16]
 gi|408612978|gb|EKK86309.1| ATP synthase F1, epsilon subunit [Vibrio cholerae CP1033(6)]
 gi|408616823|gb|EKK89963.1| ATP synthase F1, epsilon subunit [Vibrio cholerae CP1035(8)]
 gi|408629166|gb|EKL01875.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-17A1]
 gi|408632228|gb|EKL04697.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-50A2]
 gi|408632718|gb|EKL05153.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-41B1]
 gi|408633908|gb|EKL06194.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-55C2]
 gi|408639221|gb|EKL11042.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-60A1]
 gi|408654864|gb|EKL25991.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HE-40]
 gi|408661037|gb|EKL32031.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-77A1]
 gi|408661793|gb|EKL32772.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-62A1]
 gi|408662826|gb|EKL33731.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HE-46]
 gi|408843776|gb|EKL83926.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-37A1]
 gi|408850903|gb|EKL90844.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-17A2]
 gi|408851772|gb|EKL91637.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-02C1]
 gi|408856828|gb|EKL96518.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-55B2]
 gi|408859642|gb|EKL99297.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-46B1]
 gi|408865511|gb|EKM04912.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-59B1]
 gi|408868303|gb|EKM07639.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-44C1]
 gi|408876583|gb|EKM15696.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-62B1]
 gi|408882506|gb|EKM21321.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-69A1]
 gi|429227695|gb|EKY33683.1| ATP synthase epsilon chain [Vibrio cholerae PS15]
 gi|439972330|gb|ELP48625.1| ATP synthase epsilon chain [Vibrio cholerae 4260B]
 gi|443433530|gb|ELS76031.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-64A1]
 gi|443437359|gb|ELS83450.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-65A1]
 gi|443441199|gb|ELS90861.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-67A1]
 gi|443445015|gb|ELS98266.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-68A1]
 gi|443448849|gb|ELT05458.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-71A1]
 gi|443451911|gb|ELT12148.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-72A2]
 gi|443452745|gb|ELT16586.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-78A1]
 gi|443460332|gb|ELT31421.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-80A1]
 gi|443467762|gb|ELT42416.1| ATP synthase F1, epsilon subunit [Vibrio cholerae HC-81A1]
 gi|448265794|gb|EMB03027.1| ATP synthase epsilon chain [Vibrio cholerae O1 str. Inaba G4222]
 gi|449079457|gb|EMB50380.1| ATP synthase subunit epsilon [Vibrio mimicus CAIM 602]
          Length = 140

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+   V    G  GI   H P L  +KPG++ + +  G  + I+VS G + V   ++  +
Sbjct: 22  VETFQVTGSEGELGIFHGHTPLLTAIKPGMVRIVKLHGHEEYIYVSGGIVEVQPGTAT-V 80

Query: 98  IAEEAHPVDSLDASAARDVLSKAQS---------ELSSASSETAKAEAQIAV 140
           +A+ A   + LDA+ A +   +A+          + + A+SE AKA AQ+ V
Sbjct: 81  LADTAIRGEDLDAAKAEEAKRRAEERILNQHGDMDFAQAASELAKAIAQLRV 132


>gi|262371346|ref|ZP_06064664.1| H+-transporting two-sector ATPase [Acinetobacter johnsonii SH046]
 gi|262313683|gb|EEY94732.1| H+-transporting two-sector ATPase [Acinetobacter johnsonii SH046]
          Length = 139

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 4/126 (3%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           M   + S N+  Y+   V  +      G  GI+P H P + +L+PG I V    G  + I
Sbjct: 4   MQCDVVSVNESLYSG-TVTMLIAKGAGGELGIMPGHAPLVTLLQPGAIRVLLENGTEELI 62

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASS--ETAKAEAQI 138
           +VS G + V     + I+A+ A   ++LD +A  +    A++ L++  S  +TA A A +
Sbjct: 63  YVSGGVLEV-QPHVITILADTAVRAENLDEAAILEARKNAEALLANQKSDLDTAAALAVL 121

Query: 139 AVEVAE 144
           A  VA+
Sbjct: 122 AETVAQ 127


>gi|194291165|ref|YP_002007072.1| F0F1 ATP synthase subunit epsilon [Cupriavidus taiwanensis LMG
           19424]
 gi|193225000|emb|CAQ71011.1| membrane-bound ATP synthase, F1 sector, epsilon-subunit
           [Cupriavidus taiwanensis LMG 19424]
          Length = 147

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 1/99 (1%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  SG  GILP H P +  ++PG + + + +G  + +FV+ G + V     V ++
Sbjct: 30  KFVALPGESGELGILPGHTPLITRIQPGAVRIEKEDGSEEFVFVAGGILEVQ-PKHVTVL 88

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           A+ A     LD + A++    A+  + + SS+   A AQ
Sbjct: 89  ADTAIRGGDLDEAKAQEAKRAAEELMQNQSSDLDLARAQ 127


>gi|423015279|ref|ZP_17006000.1| F0F1 ATP synthase subunit epsilon [Achromobacter xylosoxidans
           AXX-A]
 gi|338781737|gb|EGP46118.1| F0F1 ATP synthase subunit epsilon [Achromobacter xylosoxidans
           AXX-A]
          Length = 141

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 6/106 (5%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  +G  GILP H P ++ ++PG + +   +   + IFV+ G + V    SV ++
Sbjct: 21  KFVVLPGEAGELGILPGHTPLISRIRPGTVKIVRADQGEENIFVAGGILEVQ-PGSVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAE 144
           A+ A     LD + A +   +A+  L++     AK +A IAV  AE
Sbjct: 80  ADTAIRAADLDEARALEARKRAEEALAN-----AKDKADIAVVEAE 120


>gi|331004506|ref|ZP_08327976.1| ATP synthase F1 [Lachnospiraceae oral taxon 107 str. F0167]
 gi|330410684|gb|EGG90107.1| ATP synthase F1 [Lachnospiraceae oral taxon 107 str. F0167]
          Length = 133

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 8/131 (6%)

Query: 19  DQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQ 78
           D+    +   + +FY   +   V+  +  G  GI   H+P ++++ PG +T++  +G  +
Sbjct: 2   DKFALKIICPDHIFYEG-DATMVEFTTTEGNVGIFAKHIPMVSVVAPGKLTIHCEDGSEK 60

Query: 79  KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSS------ASSETA 132
              + SG   V  D SV I+A+     D +D + A++   +AQ  LS       A +E A
Sbjct: 61  TCALHSGFAEVLQD-SVTIMADSCEYSDRIDITRAKEAKERAQKRLSEREGVDIARAEMA 119

Query: 133 KAEAQIAVEVA 143
              A + ++VA
Sbjct: 120 LRRALVRLDVA 130


>gi|345892762|ref|ZP_08843576.1| ATP synthase F1, epsilon subunit [Desulfovibrio sp. 6_1_46AFAA]
 gi|345046889|gb|EGW50764.1| ATP synthase F1, epsilon subunit [Desulfovibrio sp. 6_1_46AFAA]
          Length = 133

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 2/101 (1%)

Query: 43  VPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEA 102
            P   G FG+LP HV  L+ LK G +  Y   G  + +F+S G   VN++  + ++AE A
Sbjct: 25  CPGVEGEFGVLPQHVSMLSALKIGDLR-YRVNGKDENVFISGGFADVNNN-VLSVLAESA 82

Query: 103 HPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
                +D + A+    +A+  LS+      +  A+ A++ A
Sbjct: 83  ELATDIDTARAQAAKERAEKRLSAHDDSLDETRAEAALQRA 123


>gi|91795096|ref|YP_564747.1| F0F1 ATP synthase subunit epsilon [Shewanella denitrificans OS217]
 gi|119367780|sp|Q12HQ2.1|ATPE_SHEDO RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|91717098|gb|ABE57024.1| ATP synthase F1, epsilon subunit [Shewanella denitrificans OS217]
          Length = 142

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 13/130 (10%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           Q+D   A G    Y+ + V  + V    G  GI+  H P ++ +KPG+  V + +G S++
Sbjct: 7   QLDIVSAEGG--IYSGR-VSHLQVTGSEGELGIMHGHAPLISKIKPGMARVTKQDG-SEE 62

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASS---------E 130
           +F  SG I     +S  I+A+     D +D  AA +  ++A++ +  A S         E
Sbjct: 63  VFYLSGGILEVQPASTSILADVVLRADDIDEKAAIEAKNRAEAHMVDAGSDFDYQAALIE 122

Query: 131 TAKAEAQIAV 140
            AKA AQ+ V
Sbjct: 123 IAKATAQLRV 132


>gi|303325906|ref|ZP_07356349.1| ATP synthase F1, epsilon subunit [Desulfovibrio sp. 3_1_syn3]
 gi|302863822|gb|EFL86753.1| ATP synthase F1, epsilon subunit [Desulfovibrio sp. 3_1_syn3]
          Length = 135

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 2/101 (1%)

Query: 43  VPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEA 102
            P   G FG+LP HV  L+ LK G +  Y   G  + +F+S G   VN++  + ++AE A
Sbjct: 27  CPGVEGEFGVLPQHVSMLSALKIGDLR-YRVNGKDENVFISGGFADVNNN-VLSVLAESA 84

Query: 103 HPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
                +D + A+    +A+  LS+      +  A+ A++ A
Sbjct: 85  ELATDIDTARAQAAKERAEKRLSAHDDSLDETRAEAALQRA 125


>gi|440783080|ref|ZP_20960891.1| F0F1 ATP synthase subunit epsilon [Clostridium pasteurianum DSM
           525]
 gi|440219655|gb|ELP58866.1| F0F1 ATP synthase subunit epsilon [Clostridium pasteurianum DSM
           525]
          Length = 134

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 2/112 (1%)

Query: 32  FYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVND 91
           FY   +V +V+  + SG  GILP H P + +L P V  +   +G  + +F S+G + V  
Sbjct: 16  FYEG-DVSEVNTSTTSGGIGILPQHSPFIGLLIPTVTKLKFDDGSEKSLFTSTGILQVTK 74

Query: 92  DSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
           +  ++II ++A   + +D   A     +A+  L           A+IA++ A
Sbjct: 75  E-EIKIIVDDAEWPEDIDIDRAEKAKERAEERLHKNDPNIDARRAEIALQRA 125


>gi|60117189|ref|YP_209523.1| ATP synthase CF1 epsilon subunit [Huperzia lucidula]
 gi|68052071|sp|Q5SD05.1|ATPE_HUPLU RecName: Full=ATP synthase epsilon chain, chloroplastic; AltName:
           Full=ATP synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|50659997|gb|AAT80719.1| ATP synthase CF1 epsilon subunit (chloroplast) [Huperzia lucidula]
          Length = 138

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 3/125 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           ++  + + N+  + N  V+++ + + SG  G+LPNH P L  L  G IT     G    +
Sbjct: 3   LNLRVMTPNRTVW-NSEVQEMILSTNSGQIGVLPNHAPLLTALDIG-ITKIRLNGQWSTM 60

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
            +  G   V D++ V I+  EA     +D   A++    AQ+ L+ A  +    EA +A 
Sbjct: 61  ALMGGFAMV-DNNQVTILVNEAEEAAGIDPQEAKETFRIAQTNLARAEGKKQVIEANLAF 119

Query: 141 EVAEA 145
           + A+A
Sbjct: 120 KRAKA 124


>gi|296327997|ref|ZP_06870532.1| ATP synthase F1 sector epsilon subunit [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
 gi|296154953|gb|EFG95735.1| ATP synthase F1 sector epsilon subunit [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
          Length = 134

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 48/96 (50%)

Query: 48  GAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDS 107
           G  GILPNH P +A L  G + +       + I+  SG      D+   +IA+E  P++ 
Sbjct: 30  GDIGILPNHAPFVAELSMGKMEIESPNKDRRDIYFLSGGFLEISDNQATVIADEVFPIEK 89

Query: 108 LDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
           +D  + + ++   + EL   S+E  K + Q  ++++
Sbjct: 90  IDVESEQALVENFKKELEKVSTEEEKRKLQKKIKIS 125


>gi|254512354|ref|ZP_05124421.1| ATP synthase F1, epsilon subunit [Rhodobacteraceae bacterium KLH11]
 gi|221536065|gb|EEE39053.1| ATP synthase F1, epsilon subunit [Rhodobacteraceae bacterium KLH11]
          Length = 136

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 8/118 (6%)

Query: 17  YADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGV 76
            A+ M F L S  +   + +    V +P   G    +P+H PT+  L+PG++ V   EG 
Sbjct: 1   MANTMQFDLVSPERSLASLE-ATAVQLPGADGDMTAMPDHAPTITTLRPGLLKVQAPEG- 58

Query: 77  SQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKA 134
           S +  V+ G   +N D  + ++AE+A PV  +  S   D++++A+     AS + AKA
Sbjct: 59  SSEYLVTGGFAQINGD-GLSVLAEKAIPVAEVTRSHLDDLIAEAR-----ASHDAAKA 110


>gi|82597115|ref|XP_726545.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
 gi|23481992|gb|EAA18110.1| hypothetical protein [Plasmodium yoelii yoelii]
          Length = 159

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 6/106 (5%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
            +  T++S ++  + NQ +K+  VP   G F I  NH P + +L+ GVITV   E   ++
Sbjct: 17  NLYLTISSSSESIFRNQVIKRASVPGIEGYFTITNNHSPLVTLLRNGVITVEFDEKEKKQ 76

Query: 80  IFVSSGTITVNDDSSV------QIIAEEAHPVDSLDASAARDVLSK 119
            F+S G       +        +I+  E  P++ LD +    VL +
Sbjct: 77  FFISDGIFIYKKSNDNNNNNNAEIVGIEIVPLEYLDKNKTVKVLQQ 122


>gi|407937126|ref|YP_006852767.1| F0F1 ATP synthase subunit epsilon [Acidovorax sp. KKS102]
 gi|407894920|gb|AFU44129.1| F0F1 ATP synthase subunit epsilon [Acidovorax sp. KKS102]
          Length = 138

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 5/113 (4%)

Query: 41  VDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAE 100
           V +P  +G  GI P H P +  +KPG + +   +G  + +FV+ G + V  +  V ++++
Sbjct: 23  VALPGEAGELGIYPRHTPLITRIKPGSVRIEMADGGEEFVFVAGGILEVQPN-CVTVLSD 81

Query: 101 EAHPVDSLDASAARDVLSKAQSELSSASSET--AKAEAQIAVEVAE--ALKIF 149
            A     LD   A    S A+  L +A S+   AKA++++AV  A+  AL+ F
Sbjct: 82  TAIRGKDLDDEKANAAKSAAEEALKNAKSDIDLAKAQSELAVMAAQIAALRKF 134


>gi|375091807|ref|ZP_09738095.1| ATP synthase F1, epsilon subunit [Helcococcus kunzii ATCC 51366]
 gi|374562694|gb|EHR34021.1| ATP synthase F1, epsilon subunit [Helcococcus kunzii ATCC 51366]
          Length = 136

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/118 (22%), Positives = 63/118 (53%), Gaps = 6/118 (5%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
            +  + + + +FY  +  + + +P+  G +GIL +H  T++ ++PG++   + +GV  + 
Sbjct: 4   FNLKIYASDHIFYDGE-CEHISIPTKDGYYGILADHRNTISAIEPGMLRFRDADGVEHEA 62

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAAR----DVLSKAQSELSSASSETAKA 134
            V+ G I + +++ + ++    +P D +D +A +    + L K + + S     TA+A
Sbjct: 63  VVTRGMIKIEENTVLVLVLRCEYP-DEVDLNAIKREEEEALRKIREKNSKMEFHTAEA 119


>gi|170729215|ref|YP_001763241.1| F0F1 ATP synthase subunit epsilon [Shewanella woodyi ATCC 51908]
 gi|226740287|sp|B1KQ33.1|ATPE_SHEWM RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|169814562|gb|ACA89146.1| ATP synthase F1, epsilon subunit [Shewanella woodyi ATCC 51908]
          Length = 142

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 4/111 (3%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           Q+D   A  N +F  +  V  + V    G  G++P H P L  +KPG+  + + +G  + 
Sbjct: 7   QLDIVSAE-NSIF--SGLVAHLQVTGSEGDLGVMPGHAPLLTNIKPGMARIVKQDGKEEV 63

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
            ++S G + V   SSV ++A+     D +D  AA +   +A+S ++ A ++
Sbjct: 64  FYLSGGILEVQ-PSSVSVLADVVKRADEIDEKAAEEAKRRAESAMADAGAD 113


>gi|304407759|ref|ZP_07389410.1| ATP synthase F1, epsilon subunit [Paenibacillus curdlanolyticus
           YK9]
 gi|304343242|gb|EFM09085.1| ATP synthase F1, epsilon subunit [Paenibacillus curdlanolyticus
           YK9]
          Length = 131

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 2/108 (1%)

Query: 36  QNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSV 95
           Q V  V V    G  GILPNH+P +  L+   + V + +G ++ + VS G I +  D  V
Sbjct: 18  QEVNMVSVKGADGELGILPNHIPLVTPLRIAPV-VIKKDGATETLAVSGGFIEIRKDKVV 76

Query: 96  QIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
            I+AE A     +D + A     +A+  LS+   E     A++A++ A
Sbjct: 77  -ILAESAELAGDIDLARAEASKERAEQRLSAKRDEVDYRRAELALQRA 123


>gi|258544336|ref|ZP_05704570.1| ATP synthase F1, epsilon subunit [Cardiobacterium hominis ATCC
           15826]
 gi|258520416|gb|EEV89275.1| ATP synthase F1, epsilon subunit [Cardiobacterium hominis ATCC
           15826]
          Length = 138

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 14/127 (11%)

Query: 24  TLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVS 83
            + S ++  Y  +  +++   +  G  GIL  H P LA+LK G + + +  G  + I++S
Sbjct: 8   NMVSADRQLYCGE-AERIVATADHGELGILAGHAPLLAVLKAGQVRLTQEGGKEEVIYIS 66

Query: 84  SGTITVNDDSSVQIIAEEAHPVDSLDASAA-----------RDVLSKAQSELSSASSETA 132
            G I V  + ++ I+A++A   + LD               RD  S  + EL+ A +E A
Sbjct: 67  GGFIEVQHEQTI-ILADDAERAEHLDEERVREARRRAEDKMRDKAS-TKLELARAQAELA 124

Query: 133 KAEAQIA 139
           +  AQ+A
Sbjct: 125 QTMAQLA 131


>gi|359394595|ref|ZP_09187648.1| ATP synthase epsilon chain [Halomonas boliviensis LC1]
 gi|357971842|gb|EHJ94287.1| ATP synthase epsilon chain [Halomonas boliviensis LC1]
          Length = 142

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 1/93 (1%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+QV      G  GILP H P L  L+PG + V   +G     FVS G + V  D  V I
Sbjct: 21  VEQVIASGMMGDLGILPGHAPLLTELQPGPVRVIHDDGKEDNFFVSGGFMEVQPD-VVTI 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
           +A+ A     L+ +AA +   +A    +  S+E
Sbjct: 80  LADSASRASDLNEAAAEEARLQALKAFNEKSTE 112


>gi|323493010|ref|ZP_08098146.1| F0F1 ATP synthase subunit epsilon [Vibrio brasiliensis LMG 20546]
 gi|323312746|gb|EGA65874.1| F0F1 ATP synthase subunit epsilon [Vibrio brasiliensis LMG 20546]
          Length = 140

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+   V    G  GI   H P L  +KPG++ + +  G  + I+VS G + V   ++  +
Sbjct: 22  VETFQVTGSEGELGIFHGHTPLLTAIKPGMVRIVKQHGHEEIIYVSGGMVEVQPGTAT-V 80

Query: 98  IAEEAHPVDSLDASAARDVLSKAQS---------ELSSASSETAKAEAQIAV 140
           +A+ A   + LDA+ A +   +A+          + + A+SE AKA AQ+ V
Sbjct: 81  LADTAIRGEELDAAKAEEAKRRAEENIQNQHGDMDFAQAASELAKAIAQLRV 132


>gi|242241388|ref|YP_002989569.1| ATP synthase F1 subunit epsilon [Dickeya dadantii Ech703]
 gi|242133445|gb|ACS87747.1| ATP synthase F1, epsilon subunit [Dickeya dadantii Ech703]
          Length = 140

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG++ + +  G  + I++S G + V  +  V +
Sbjct: 22  VQKIQVTGVEGELGIYPGHAPLLTAIKPGMVRIVKQYGEEEYIYLSGGVLEVQPN-MVTV 80

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +++ A     LD + A +   KA++ + +         AS+E AKA A++ V
Sbjct: 81  LSDTAIRGQDLDEARALESKRKAEAHIHNTHGDVDYAQASAELAKAIAKLRV 132


>gi|328545828|ref|YP_004305937.1| ATP synthase subunit epsilon [Polymorphum gilvum SL003B-26A1]
 gi|326415568|gb|ADZ72631.1| ATP synthase epsilon chain [Polymorphum gilvum SL003B-26A1]
          Length = 135

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 68/134 (50%), Gaps = 6/134 (4%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           A+   F L S  ++  +++ V +V VP   G FG+L +H P ++ ++PG++ V +     
Sbjct: 2   AEPFQFELVSPERLLLSDK-VLEVVVPGTEGEFGVLKDHSPFMSTMRPGLLKVRKDGDKV 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
            + FV  G   V+  + + ++AE A PV+ +        +  A+ +L+ A  + A+  A+
Sbjct: 61  TEYFVRGGFADVS-SAGLTVLAELAIPVEEIKPDDIAAQIRNAEEDLADARDDEARRAAE 119

Query: 138 IAV----EVAEALK 147
             +    EV  ALK
Sbjct: 120 TVLAQLREVQAALK 133


>gi|262273111|ref|ZP_06050928.1| ATP synthase epsilon chain [Grimontia hollisae CIP 101886]
 gi|262222867|gb|EEY74175.1| ATP synthase epsilon chain [Grimontia hollisae CIP 101886]
          Length = 140

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 13/131 (9%)

Query: 21  MDFTL--ASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQ 78
           M F L   S  K  ++ +  + + V    G  GI P H P L  + PG+I + +  G  +
Sbjct: 4   MTFHLDVVSAEKQLFSGR-AESIQVTGSEGELGIFPGHTPLLTAVTPGMIRITKQHGHEE 62

Query: 79  KIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQS---------ELSSASS 129
            I++S GT+ V   S+V ++A+ A     LD + A +   +A+          + + A+S
Sbjct: 63  VIYLSGGTLEVQ-PSTVTVLADTAIRGVDLDQAKAEEAKRRAEERILNKNGDMDFAQAAS 121

Query: 130 ETAKAEAQIAV 140
           + AKA AQ+ V
Sbjct: 122 DLAKAIAQLRV 132


>gi|421093236|ref|ZP_15553963.1| ATP synthase F1, epsilon subunit [Leptospira borgpetersenii str.
           200801926]
 gi|410364199|gb|EKP15225.1| ATP synthase F1, epsilon subunit [Leptospira borgpetersenii str.
           200801926]
 gi|456891218|gb|EMG01960.1| ATP synthase F1, epsilon subunit [Leptospira borgpetersenii str.
           200701203]
          Length = 127

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 3/104 (2%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           A +++ ++ S  K+ Y  + V  + VP   G FGILPNH P +A L  GV+ + + E + 
Sbjct: 3   AHKLNVSVISPEKILYKGE-VDSLVVPGSEGFFGILPNHAPLVATLGIGVLEIRKGEKL- 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQ 121
           + I V  G I V D+ +V I+ +     + +D  A +  L++ +
Sbjct: 61  KNISVEGGFIEVKDN-TVSILTDHGALKEDIDIEAEKKALAEVE 103


>gi|406999060|gb|EKE16834.1| F0F1 ATP synthase subunit epsilon [uncultured bacterium]
          Length = 141

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 4/104 (3%)

Query: 44  PSFSGAFGILPNHVPTLAILKPGVITV-YETEGVSQKIFVSSGTITVNDDSSVQIIAEEA 102
           P  +G  GILP H P L  +KPG I +    +   + ++VS G + V  D  + ++A+ A
Sbjct: 27  PGEAGELGILPRHTPLLTRIKPGTIRLKVPNQADYELVYVSGGMLEVQPD-MITVLADTA 85

Query: 103 HPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
                LD + A D   +A+  L++  +E   A A+I  E+A+A+
Sbjct: 86  IRAHDLDEAKALDAKKRAEEALANRQAEVDYAYAEI--ELAQAI 127


>gi|94312424|ref|YP_585634.1| F0F1 ATP synthase subunit epsilon [Cupriavidus metallidurans CH34]
 gi|119367766|sp|Q1LHL1.1|ATPE_RALME RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|93356276|gb|ABF10365.1| F1 sector of membrane-bound ATP synthase, epsilon subunit
           [Cupriavidus metallidurans CH34]
          Length = 138

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 1/99 (1%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  SG  GILP H P +  ++PG + + + +G  + +FV+ G + V     V ++
Sbjct: 21  KFVALPGESGELGILPGHTPLITRIQPGAVRIEKEDGGEEFVFVAGGILEVQ-PQHVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           A+ A     LD + A +    A+  L + SS+   A AQ
Sbjct: 80  ADTAIRGTDLDEAKASEAKRAAEEMLQNQSSDLDLARAQ 118


>gi|241765095|ref|ZP_04763086.1| ATP synthase F1, epsilon subunit [Acidovorax delafieldii 2AN]
 gi|241365287|gb|EER60115.1| ATP synthase F1, epsilon subunit [Acidovorax delafieldii 2AN]
          Length = 138

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 3/104 (2%)

Query: 43  VPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEA 102
           +P  +G  G+ P H P +  +KPG + +   +G  + +FV+ G + V  D  V ++++ A
Sbjct: 25  LPGEAGELGVYPRHTPLITRIKPGSVRIEMADGSEEFVFVAGGILEVQPD-CVTVLSDTA 83

Query: 103 HPVDSLDASAARDVLSKAQSELSSASSET--AKAEAQIAVEVAE 144
                LD   A    + A+  L +A SE   AKA++++A+  A+
Sbjct: 84  IRGKDLDDEKANAAKASAEEALKNAKSEIDLAKAQSELAIMAAQ 127


>gi|330813465|ref|YP_004357704.1| ATP synthase subunit epsilon [Candidatus Pelagibacter sp. IMCC9063]
 gi|327486560|gb|AEA80965.1| ATP synthase epsilon chain [Candidatus Pelagibacter sp. IMCC9063]
          Length = 133

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 4/116 (3%)

Query: 30  KVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITV 89
           K  ++  NV   +VP   G   IL NH+P +  LKPG I + E +G  +  F+S G +  
Sbjct: 14  KKIFSKDNVLSANVPGIEGDLEILSNHIPIITFLKPGRINI-EVDGSKKSFFISDGVLEF 72

Query: 90  NDDSSVQIIAE--EAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
           N +    +++E  +   +DS      R+  SK +S+  + +   A    +   EV+
Sbjct: 73  NSNVLTILVSEIFDTMAIDSTTLDYLRNK-SKEKSQRRNQTDNEAYLSGRFEEEVS 127


>gi|261250660|ref|ZP_05943235.1| ATP synthase epsilon chain [Vibrio orientalis CIP 102891 = ATCC
           33934]
 gi|417954346|ref|ZP_12597383.1| F0F1 ATP synthase subunit epsilon [Vibrio orientalis CIP 102891 =
           ATCC 33934]
 gi|260939229|gb|EEX95216.1| ATP synthase epsilon chain [Vibrio orientalis CIP 102891 = ATCC
           33934]
 gi|342815614|gb|EGU50529.1| F0F1 ATP synthase subunit epsilon [Vibrio orientalis CIP 102891 =
           ATCC 33934]
          Length = 140

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+   V    G  GI   H P L  + PG++ + +  G  + I+VS G + V   ++  +
Sbjct: 22  VETFQVTGSEGELGIYHGHTPLLTAITPGMVRLVKQHGHEEFIYVSGGMVEVQPGTAT-V 80

Query: 98  IAEEAHPVDSLDASAARDVLSKAQS---------ELSSASSETAKAEAQIAV 140
           +A+ A   D LDA+ A +   +AQ          + + A+SE AKA AQ+ V
Sbjct: 81  LADTAIRGDELDAAKAEEAKRRAQEAIQNQHGDMDFAQAASELAKAIAQLRV 132


>gi|89897657|ref|YP_521144.1| F0F1 ATP synthase subunit epsilon [Desulfitobacterium hafniense
           Y51]
 gi|119361429|sp|Q24MP2.1|ATPE_DESHY RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|89337105|dbj|BAE86700.1| ATP synthase F1 epsilon subunit [Desulfitobacterium hafniense Y51]
          Length = 132

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 2/85 (2%)

Query: 41  VDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAE 100
           V +P  +G  GILPNH P ++ ++ GVI  Y   G  +KI  S G + V+D+  V I+A+
Sbjct: 24  VVLPGGNGEIGILPNHAPLISSIEIGVIR-YTVNGKVEKIATSGGFVEVSDN-KVTILAD 81

Query: 101 EAHPVDSLDASAARDVLSKAQSELS 125
            A P + +D   A     +A+  L+
Sbjct: 82  TAEPGEKVDLDRALAAKERAEKRLT 106


>gi|297569850|ref|YP_003691194.1| ATP synthase F1, epsilon subunit [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925765|gb|ADH86575.1| ATP synthase F1, epsilon subunit [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 138

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 2/99 (2%)

Query: 35  NQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSS 94
           ++ V  V  P ++G FG+L NH P L+ +K G + VY+ +G    + VS G   V+++  
Sbjct: 18  SEQVDMVTAPGYAGVFGVLANHAPLLSTIKIGTL-VYKKDGQDATLMVSGGFCEVSNN-K 75

Query: 95  VQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAK 133
           V  + E A     +D   A     +A+  L+ A ++  K
Sbjct: 76  VTFLVESAERGAEIDTERALRAKERAEKRLAEAIAQQEK 114


>gi|422320652|ref|ZP_16401708.1| ATP synthase subunit epsilon [Achromobacter xylosoxidans C54]
 gi|317404546|gb|EFV84953.1| ATP synthase subunit epsilon [Achromobacter xylosoxidans C54]
          Length = 141

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 6/106 (5%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  +G  GILP H P ++ ++PG + +   +   + IFV+ G + V    SV ++
Sbjct: 21  KFVVLPGEAGELGILPGHTPLISRVRPGTVKIVRADQGEENIFVAGGILEVQ-PGSVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAE 144
           A+ A     LD + A +   +A+  L++     AK +A IAV  AE
Sbjct: 80  ADTAIRAADLDEARALEARKRAEEALAN-----AKDKADIAVVEAE 120


>gi|428211874|ref|YP_007085018.1| ATP synthase F1 subunit epsilon [Oscillatoria acuminata PCC 6304]
 gi|428000255|gb|AFY81098.1| ATP synthase, F1 epsilon subunit [Oscillatoria acuminata PCC 6304]
          Length = 160

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 4/107 (3%)

Query: 40  QVDVPSFSGAFGILPNHVPTLAILKPGVITV-YETEGVSQKIFVSSGTITVNDDSSVQII 98
           +V +P+ +G  GIL  HV  +  +K GV+ + Y+   +   IFV  G   +  D  V ++
Sbjct: 21  EVILPTSTGQIGILSGHVALVTFIKVGVMRIRYQNTWIP--IFVKGGFAEIEGDI-VTVL 77

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEA 145
             +A   D +D   A   L KAQ++LS AS+   K  AQ+ ++ A A
Sbjct: 78  VNDAERGDRIDPEIAHSELEKAQAQLSQASNSLEKIRAQLFLKQARA 124


>gi|399908086|ref|ZP_10776638.1| F0F1 ATP synthase subunit epsilon [Halomonas sp. KM-1]
          Length = 142

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 1/93 (1%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           ++Q+      G  GILP H P L  L+PG + V    G  +  +VS G + V  D  V +
Sbjct: 21  IEQLVASGIMGDLGILPGHAPLLTELQPGPVRVIREGGTEENFYVSGGFLEVQPD-VVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
           +A+ A     LD +AA +    A    +  SSE
Sbjct: 80  LADAASRAGDLDEAAAEEARQHALKAFNDKSSE 112


>gi|219670786|ref|YP_002461221.1| ATP synthase F0F1 subunit epsilon [Desulfitobacterium hafniense
           DCB-2]
 gi|254809361|sp|B8FZ33.1|ATPE_DESHD RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|219541046|gb|ACL22785.1| ATP synthase F1, epsilon subunit [Desulfitobacterium hafniense
           DCB-2]
          Length = 132

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 2/85 (2%)

Query: 41  VDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAE 100
           V +P  +G  GILPNH P ++ ++ GVI  Y   G  +KI  S G + V+D+  V I+A+
Sbjct: 24  VVLPGGNGEIGILPNHAPLISSIEIGVIR-YTVNGKVEKIATSGGFVEVSDN-KVTILAD 81

Query: 101 EAHPVDSLDASAARDVLSKAQSELS 125
            A P + +D   A     +A+  L+
Sbjct: 82  TAEPGERVDLDRALAAKERAEKRLT 106


>gi|428297773|ref|YP_007136079.1| ATP synthase F1 subcomplex subunit epsilon [Calothrix sp. PCC 6303]
 gi|428234317|gb|AFZ00107.1| ATP synthase F1 subcomplex epsilon subunit [Calothrix sp. PCC 6303]
          Length = 137

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 56/115 (48%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           ++V +PS +G  G+L  H P L+ L  GV+ V   +G S       G     +++ V I+
Sbjct: 20  EEVILPSTTGQLGVLTGHAPMLSALDTGVMRVRADKGQSWTAIALMGGFAEVEENEVTIL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEALKIFVSSG 153
              A   D+++   AR   S+AQS L   +++  +A+ Q    +  A   F ++G
Sbjct: 80  VNGAERGDNINLDEARSAYSEAQSRLDKVATDDKQAQIQATQALKRARARFQAAG 134


>gi|288818389|ref|YP_003432737.1| ATP synthase F1 epsilon subunit [Hydrogenobacter thermophilus TK-6]
 gi|384129145|ref|YP_005511758.1| ATP synthase F1 subunit epsilon [Hydrogenobacter thermophilus TK-6]
 gi|288787789|dbj|BAI69536.1| ATP synthase F1 epsilon subunit [Hydrogenobacter thermophilus TK-6]
 gi|308751982|gb|ADO45465.1| ATP synthase F1, epsilon subunit [Hydrogenobacter thermophilus
           TK-6]
          Length = 132

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 60/118 (50%), Gaps = 10/118 (8%)

Query: 36  QNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSV 95
           + V  V++P+  G  G+L  H+  + +LKPG+I  Y        I V+ G + +  +  +
Sbjct: 16  RQVNSVNIPTQEGEIGVLERHMYLMTLLKPGLI--YFDGNQKDGIAVTYGFVDITPERVI 73

Query: 96  QIIAEEAHPVDSLDASAARDVLSKAQSELSSASS-------ETAKAEAQIAVEVAEAL 146
            I+AEEA+ V  +DA   +++  +A  +L++A +       E  +  A+  +E+ E  
Sbjct: 74  -ILAEEAYTVGEIDAGKEKELFDQAVKKLATAQTMEEMQEWERVRDRARTLLEILERF 130


>gi|220936459|ref|YP_002515358.1| F0F1 ATP synthase subunit epsilon [Thioalkalivibrio sulfidophilus
           HL-EbGr7]
 gi|254809439|sp|B8GRB7.1|ATPE_THISH RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|219997769|gb|ACL74371.1| F0F1 ATP synthase subunit epsilon [Thioalkalivibrio sulfidophilus
           HL-EbGr7]
          Length = 141

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 5/109 (4%)

Query: 44  PSFSGAFGILPNHVPTLAILKPGVITVYETE-GVSQKIFVSSGTITVNDDSSVQIIAEEA 102
           P+  G  GILP H   +A LKPG + V  ++ G    IF+S G + V     V ++A+ A
Sbjct: 27  PAEGGEVGILPRHSQYIAQLKPGEVRVKVSDSGEEHSIFISGGLLEVQ-PHVVTVLADTA 85

Query: 103 HPVDSLDASAARDVLSKAQSELS--SASSETAKAEAQIAVEVAEALKIF 149
                LD + A++ + +A+  LS   A  + AKA+A++ +E A  L++ 
Sbjct: 86  VRAKDLDEAEAKEAMRRAEEALSDRKADFDYAKAQAEL-IEAAARLRMI 133


>gi|71891802|ref|YP_277531.1| ATP synthase F1 subunit epsilon [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|119361413|sp|Q494C2.1|ATPE_BLOPB RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|71795908|gb|AAZ40659.1| ATP synthase, F1 sector, epsilon-subunit [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 144

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 1/89 (1%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  G+ P H P L  +KPGV+ + ++    + I++S G + V  +  V I
Sbjct: 22  VRKIQVTGIEGEMGVFPGHTPLLTSIKPGVLRIVKSHDNEEYIYISGGILEVQRN-IVTI 80

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS 126
           +A+ A   + LD   A++   +A+  + +
Sbjct: 81  LADTAIRAEELDEKKAKEAKHEAEKHIKN 109


>gi|71066577|ref|YP_265304.1| ATP synthase F0F1 subunit epsilon [Psychrobacter arcticus 273-4]
 gi|119367763|sp|Q4FQ38.1|ATPE_PSYA2 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|71039562|gb|AAZ19870.1| ATP synthase F1 subcomplex epsilon subunit [Psychrobacter arcticus
           273-4]
          Length = 138

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 1/81 (1%)

Query: 48  GAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDS 107
           G  GILP H P + +LKPG + V  + G  + I+VS G + V     V ++A+ A    +
Sbjct: 30  GEIGILPGHTPLITLLKPGAMRVQTSNGEEEVIYVSGGVLEV-QPKMVTVLADTAMRAHN 88

Query: 108 LDASAARDVLSKAQSELSSAS 128
           LD S   +   KA+  L + S
Sbjct: 89  LDESKIVEARKKAEQMLVNQS 109


>gi|253690618|ref|YP_003019808.1| ATP synthase F1 subunit epsilon [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259585486|sp|C6DJH3.1|ATPE_PECCP RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|251757196|gb|ACT15272.1| ATP synthase F1, epsilon subunit [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 139

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG++ + +  G  + I++S G + V  + +V +
Sbjct: 21  VQKIQVTGSEGELGIYPGHAPLLTAIKPGMVRIVKQHGEEEYIYLSGGILEVQPN-TVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +++ A     LD + A +   KA+  + +         AS+E +KA A++ V
Sbjct: 80  LSDTAIRGQDLDEARALEAKRKAEDHIRNSHGDVDYAQASAELSKAIAKLRV 131


>gi|410584286|ref|ZP_11321391.1| ATP synthase, F1 epsilon subunit [Thermaerobacter subterraneus DSM
           13965]
 gi|410505148|gb|EKP94658.1| ATP synthase, F1 epsilon subunit [Thermaerobacter subterraneus DSM
           13965]
          Length = 140

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 23/120 (19%)

Query: 35  NQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSS 94
            + V  + VP   G  G+LP H P +A LK G++T Y  +G  +++ V+ G   V D+ +
Sbjct: 19  REEVDSLIVPGAEGLLGVLPGHAPMVAALKIGILT-YRKDGERRRVAVAGGFFEVADNHA 77

Query: 95  VQI--IAEEAHPVD--------------------SLDASAARDVLSKAQSELSSASSETA 132
           V +   AE A  +D                    + D   AR  L++A + L +A ++T 
Sbjct: 78  VVLSDAAERAEEIDVLRARQAAERARRRLAEREANWDFERARAALNRALNRLRAAGADTG 137


>gi|149918542|ref|ZP_01907031.1| ATP synthase, F1 epsilon subunit [Plesiocystis pacifica SIR-1]
 gi|149820618|gb|EDM80030.1| ATP synthase, F1 epsilon subunit [Plesiocystis pacifica SIR-1]
          Length = 151

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 4/100 (4%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+ V++P+  G  G+ P H+P L  + PGV+  +   G  +++ V  G + V+ D +V I
Sbjct: 34  VEGVELPAALGEMGVRPRHLPFLTPVVPGVVR-FRFGGQDRRMAVGRGFLEVSKDGTVTI 92

Query: 98  IAEEA---HPVDSLDASAARDVLSKAQSELSSASSETAKA 134
           + E A     VD+   S+ RD + +A  E  +A  + A++
Sbjct: 93  LTERAVRSWEVDTDAISSERDEVEEALQEFRTAPIDDARS 132


>gi|392310410|ref|ZP_10272944.1| ATP synthase, F1 sector subunit epsilon [Pseudoalteromonas citrea
           NCIMB 1889]
          Length = 138

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 1/93 (1%)

Query: 37  NVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQ 96
           +V  + V    G  GI P H P L  LKPG++ + + +   + I+V+ GT+ V    +V 
Sbjct: 20  SVATIQVTGSEGELGIHPGHAPLLTGLKPGMVRLVKADSSEEIIYVAGGTLEVQ-PQTVT 78

Query: 97  IIAEEAHPVDSLDASAARDVLSKAQSELSSASS 129
           ++A+ A   + LD  AA +   +AQ++++S ++
Sbjct: 79  VLADVAIRGEDLDEQAAEEAKREAQTQMASGAA 111


>gi|238753981|ref|ZP_04615340.1| ATP synthase epsilon chain [Yersinia ruckeri ATCC 29473]
 gi|238707733|gb|EEQ00092.1| ATP synthase epsilon chain [Yersinia ruckeri ATCC 29473]
          Length = 124

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V   S V +
Sbjct: 6   VQKIQVTGSEGELGIFPGHAPLLTAIKPGMIRIVKQFGEEEFIYLSGGILEVQ-PSVVIV 64

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA++ +++         AS+E AKA A++ V
Sbjct: 65  LADTAIRGTDLDEAKALESKRKAEAHINNSHGDVDYAQASAELAKAIAKLRV 116


>gi|221056676|ref|XP_002259476.1| hypothetical protein, conserved in Apicomplexan species [Plasmodium
           knowlesi strain H]
 gi|193809547|emb|CAQ40249.1| hypothetical protein, conserved in Apicomplexan species [Plasmodium
           knowlesi strain H]
          Length = 154

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 6/133 (4%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
            +  T++S ++  + NQ +K+   P   G F I  NH P + +L+ GVITV   E   ++
Sbjct: 17  NLYLTISSSSESIFRNQVIKRASFPGIEGYFTITNNHSPLVTLLRNGVITVEFDEKEKKQ 76

Query: 80  IFVSSGTITVNDDSSV------QIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAK 133
            F+S G       +        +I+  E  P++ LD +    VL +  +   +   +  K
Sbjct: 77  FFISDGIFIYKKSNDNSNSNNAEIVGVEIVPLEYLDKNKTVKVLQQMCAVNDATDDKWRK 136

Query: 134 AEAQIAVEVAEAL 146
            +  +  E+  ++
Sbjct: 137 IKTMLGKELCSSI 149


>gi|414161665|ref|ZP_11417919.1| ATP synthase epsilon chain [Staphylococcus simulans ACS-120-V-Sch1]
 gi|410875377|gb|EKS23297.1| ATP synthase epsilon chain [Staphylococcus simulans ACS-120-V-Sch1]
          Length = 134

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 2/124 (1%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           M+  + + N   Y   +V+   + +  G  G++  H+PT+  +K G + V  T+G+   I
Sbjct: 4   MNVNIVTPNGSVYNQDDVEIAILQTVGGDIGVMAGHLPTVTAIKTGYVKVNYTDGIDF-I 62

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
            VS G + +  +S+  II + A   + +D   A+    +A+S L++   +T    A+ A+
Sbjct: 63  AVSDGFVEIRHEST-SIIVQTAEKAEDIDIRRAKSAKERAESHLNNNDEDTDINRAERAL 121

Query: 141 EVAE 144
           E AE
Sbjct: 122 ERAE 125


>gi|411011420|ref|ZP_11387749.1| F0F1 ATP synthase subunit epsilon [Aeromonas aquariorum AAK1]
 gi|423198951|ref|ZP_17185534.1| ATP synthase epsilon chain 1 [Aeromonas hydrophila SSU]
 gi|404629799|gb|EKB26527.1| ATP synthase epsilon chain 1 [Aeromonas hydrophila SSU]
          Length = 142

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 13/130 (10%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
            +D   A G K+F  +  V+   V    G  G+   H P L  +KPG++ + +  G  + 
Sbjct: 8   HLDVVSAEG-KLF--SGRVQSAQVSGSEGELGLRHGHAPLLTAIKPGLVRLVKQNGTEEV 64

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSE 130
           +++S G + V  + +V ++A+ A   D LD + A++    A+  + S         A++E
Sbjct: 65  LYISGGMLEVQPE-AVTVLADTAIRADDLDEAKAQEAKRAAEERIHSSHGDIDYAQAATE 123

Query: 131 TAKAEAQIAV 140
            AKA AQ+ V
Sbjct: 124 LAKAMAQLRV 133


>gi|418020454|ref|ZP_12659720.1| ATP synthase, F1 epsilon subunit, partial [Candidatus Regiella
           insecticola R5.15]
 gi|347604193|gb|EGY28893.1| ATP synthase, F1 epsilon subunit [Candidatus Regiella insecticola
           R5.15]
          Length = 125

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 59/109 (54%), Gaps = 3/109 (2%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG++ + +  G    I++S G + V  +  + +
Sbjct: 5   VQKIQVTGSEGELGIFPGHAPLLTAIKPGMVRIVKQCGDEDFIYLSGGLLEVQPNVVI-V 63

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           +A+ A   + LD + A +   KA++ +  + S+     AQ++ E+A+A+
Sbjct: 64  LADTAIRGEDLDETKALEAKQKAETHIGHSHSDVDY--AQVSAELAKAI 110


>gi|284007072|emb|CBA72347.1| F0F1 ATP synthase subunit epsilon [Arsenophonus nasoniae]
          Length = 138

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V  +  + +
Sbjct: 22  VQKIQVTGSEGELGIYPQHTPLLTAIKPGMIRITKQFGEEELIYLSGGILEVQPNGVI-V 80

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSEL---------SSASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  +         + AS+E AKA A++ V
Sbjct: 81  LADTAIRGKDLDEAKALESKRKAEEHIRKAHADVDYAQASAELAKAIAKLRV 132


>gi|37522137|ref|NP_925514.1| ATP synthase subunit epsilon [Gloeobacter violaceus PCC 7421]
 gi|60389715|sp|Q7NHG9.1|ATPE_GLOVI RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|35213137|dbj|BAC90509.1| ATP synthase epsilon subunit [Gloeobacter violaceus PCC 7421]
          Length = 132

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 3/125 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           +   + + NKV + +Q V +V +PS SG  GIL NH P +  L  GV+ V + +G    I
Sbjct: 3   LQIKIVAPNKVVFDDQ-VDEVVLPSVSGQLGILTNHAPLITGLSNGVMRVRK-QGTFIPI 60

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
            V +G   V D++ V ++A  A     +D   AR  L++A+  L+++ ++T   +AQ A+
Sbjct: 61  AVLTGVAEV-DNNEVSVVAMAAELGSGIDVDRARAALARAEQTLATSQNKTELLQAQTAL 119

Query: 141 EVAEA 145
           E A A
Sbjct: 120 ERANA 124


>gi|398336237|ref|ZP_10520942.1| F0F1 ATP synthase subunit epsilon [Leptospira kmetyi serovar
           Malaysia str. Bejo-Iso9]
          Length = 127

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 60/111 (54%), Gaps = 3/111 (2%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           A +++ ++ S  K+ Y  + V  + VP   G FGILPNH P +A+L  GV+ + + + + 
Sbjct: 3   AHKLNVSVISPEKILYKGE-VDSLVVPGNEGFFGILPNHAPLVAVLGIGVLEIRKGDKI- 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS 128
           + + V  G I V ++ S+ I+ +     + +D    +  L++A+    SAS
Sbjct: 61  KALSVEGGFIEVKEN-SISILTDHGALKEDIDLETEKKALAEAEKLPPSAS 110


>gi|123444372|ref|YP_001008337.1| F0F1 ATP synthase subunit epsilon [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|332163549|ref|YP_004300126.1| F0F1 ATP synthase subunit epsilon [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|386310419|ref|YP_006006475.1| ATP synthase subunit epsilon [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|420260645|ref|ZP_14763321.1| F0F1 ATP synthase subunit epsilon [Yersinia enterocolitica subsp.
           enterocolitica WA-314]
 gi|433548862|ref|ZP_20504908.1| ATP synthase epsilon chain [Yersinia enterocolitica IP 10393]
 gi|166222509|sp|A1JTC5.1|ATPE_YERE8 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|122091333|emb|CAL14219.1| ATP synthase epsilon subunit protein [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|318608056|emb|CBY29554.1| ATP synthase epsilon chain [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325667779|gb|ADZ44423.1| F0F1 ATP synthase subunit epsilon [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330861779|emb|CBX71952.1| ATP synthase epsilon chain [Yersinia enterocolitica W22703]
 gi|404511905|gb|EKA25764.1| F0F1 ATP synthase subunit epsilon [Yersinia enterocolitica subsp.
           enterocolitica WA-314]
 gi|431789903|emb|CCO67948.1| ATP synthase epsilon chain [Yersinia enterocolitica IP 10393]
          Length = 140

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V   S V +
Sbjct: 22  VQKIQVTGSEGELGIFPGHAPLLTAIKPGMIRIVKQFGEEEFIYLSGGILEVQ-PSVVIV 80

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  +++         AS+E AKA A++ V
Sbjct: 81  LADTAIRGTDLDEAKALESKRKAEEHINNSHGDVDYAQASAELAKAIAKLRV 132


>gi|50123427|ref|YP_052594.1| ATP synthase F0F1 subunit epsilon [Pectobacterium atrosepticum
           SCRI1043]
 gi|261823739|ref|YP_003261845.1| F0F1 ATP synthase subunit epsilon [Pectobacterium wasabiae WPP163]
 gi|421083278|ref|ZP_15544154.1| ATP synthase F1 sector epsilon subunit [Pectobacterium wasabiae
           CFBP 3304]
 gi|60389563|sp|Q6CYJ6.1|ATPE_ERWCT RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|49613953|emb|CAG77406.1| ATP synthase epsilon chain [Pectobacterium atrosepticum SCRI1043]
 gi|261607752|gb|ACX90238.1| ATP synthase F1, epsilon subunit [Pectobacterium wasabiae WPP163]
 gi|385874255|gb|AFI92775.1| ATP synthase epsilon chain [Pectobacterium sp. SCC3193]
 gi|401701842|gb|EJS92089.1| ATP synthase F1 sector epsilon subunit [Pectobacterium wasabiae
           CFBP 3304]
          Length = 139

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 1/99 (1%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V  +  V +
Sbjct: 21  VQKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGEEEYIYLSGGVLEVQPN-MVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEA 136
           +++ A     LD + A +   KA+  + ++  +   A+A
Sbjct: 80  LSDTAIRGQDLDEARALEAKRKAEDHIRNSHGDVDYAQA 118


>gi|259415771|ref|ZP_05739691.1| ATP synthase F1, epsilon subunit [Silicibacter sp. TrichCH4B]
 gi|259347210|gb|EEW58987.1| ATP synthase F1, epsilon subunit [Silicibacter sp. TrichCH4B]
          Length = 137

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 56/113 (49%), Gaps = 3/113 (2%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           AD M F L S  +   + Q  + V +P   G    +P H PTL  L+PG++ V   EG +
Sbjct: 2   ADTMQFDLVSPERSLASLQ-ARAVQIPGSEGDMTAMPLHAPTLTTLRPGILKVEAPEGTT 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
           +  ++ +G         + ++AE A P+D +  +   +++ +A++   +A  +
Sbjct: 61  E--YLVTGGFAQITAEGLSVLAERAIPMDEMTRAHLDELIEEARAMYKTAKDD 111


>gi|148284423|ref|YP_001248513.1| ATP synthase subunit epsilon [Orientia tsutsugamushi str. Boryong]
 gi|146739862|emb|CAM79803.1| ATP synthase epsilon chain [Orientia tsutsugamushi str. Boryong]
          Length = 134

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 1/117 (0%)

Query: 30  KVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITV 89
           K+ Y N  V  + +P   G   +LP H+P L +LK G++ V+  +    +  +S G + V
Sbjct: 18  KIIYNNNTVDMLVLPGLEGVLAVLPQHLPMLVVLKFGIVEVHYNDRNIDRFTISGGIVKV 77

Query: 90  NDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
            D   V II+  A     +D    +  + +  +  SS  S   + E +  +   E L
Sbjct: 78  -DSQVVDIISMFAMNCTHIDGLKIKAKIEEINAVTSSKQSTLLQEEHKFLIANLELL 133


>gi|92116486|ref|YP_576215.1| F0F1 ATP synthase subunit epsilon [Nitrobacter hamburgensis X14]
 gi|119361403|sp|Q1QPU2.1|ATPE2_NITHX RecName: Full=ATP synthase epsilon chain 2; AltName: Full=ATP
           synthase F1 sector epsilon subunit 2; AltName:
           Full=F-ATPase epsilon subunit 2
 gi|91799380|gb|ABE61755.1| ATP synthase F1 subcomplex epsilon subunit [Nitrobacter
           hamburgensis X14]
          Length = 136

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 3/105 (2%)

Query: 24  TLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVS 83
           +L S   + ++ Q V QVD+P   G  G+L  H P + +L+PG++T     G  +  FV 
Sbjct: 7   SLVSPESLLFSGQ-VDQVDLPGIEGDLGVLAGHAPIVVMLRPGIVTT--VAGDIRDRFVI 63

Query: 84  SGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSAS 128
            G +       + I+A+ A  VD  D +  +  + + Q  L+  S
Sbjct: 64  LGGLAEFSQGELTILADSASSVDGFDLTRLKAQIDEMQESLAKQS 108


>gi|304413050|ref|ZP_07394523.1| membrane-bound ATP synthase, F1 complex, epsilon subunit
           [Candidatus Regiella insecticola LSR1]
 gi|304283893|gb|EFL92286.1| membrane-bound ATP synthase, F1 complex, epsilon subunit
           [Candidatus Regiella insecticola LSR1]
          Length = 142

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 59/109 (54%), Gaps = 3/109 (2%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG++ + +  G    I++S G + V  +  + +
Sbjct: 22  VQKIQVTGSEGELGIFPGHAPLLTAIKPGMVRIVKQCGDEAFIYLSGGLLEVQPNVVI-V 80

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAEAL 146
           +A+ A   + LD + A +   KA++ +  + S+     AQ++ E+A+A+
Sbjct: 81  LADTAIRGEDLDETKALEAKQKAETHIGHSHSDVDY--AQVSAELAKAI 127


>gi|271963210|ref|YP_003337406.1| ATP synthase subunit epsilon [Streptosporangium roseum DSM 43021]
 gi|270506385|gb|ACZ84663.1| ATP synthase epsilon subunit [Streptosporangium roseum DSM 43021]
          Length = 135

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 3/84 (3%)

Query: 45  SFSGAFGILPNHVPTLAIL-KPGVITVYETEGVSQKIF-VSSGTITVNDDSSVQIIAEEA 102
           +  G  GI+P H P L +L + GV+TV    G S  I  V  G ++V DD  V I+AE A
Sbjct: 27  TIDGEIGIMPKHAPVLGVLVEGGVLTVKRGGGESDLIAAVHGGFLSVADDE-VSILAEMA 85

Query: 103 HPVDSLDASAARDVLSKAQSELSS 126
                +D +AA+D L +AQ+ + +
Sbjct: 86  ELGSEVDVAAAKDALQRAQASIEA 109


>gi|117620223|ref|YP_858678.1| F0F1 ATP synthase subunit epsilon [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117561630|gb|ABK38578.1| ATP synthase F1, epsilon subunit [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 139

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 13/130 (10%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
            +D   A G K+F  +  V+   V    G  G+   H P L  +KPG++ + +  G  + 
Sbjct: 5   HLDVVSAEG-KLF--SGRVQSAQVSGSEGELGLRHGHAPLLTAIKPGLVRLVKQNGTEEV 61

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSE 130
           +++S G + V  + +V ++A+ A   D LD + A++    A+  + S         A++E
Sbjct: 62  LYISGGMLEVQPE-AVTVLADTAIRADDLDEAKAQEAKRAAEERIHSSHGDIDYAQAATE 120

Query: 131 TAKAEAQIAV 140
            AKA AQ+ V
Sbjct: 121 LAKAMAQLRV 130


>gi|430809335|ref|ZP_19436450.1| F0F1 ATP synthase subunit epsilon [Cupriavidus sp. HMR-1]
 gi|429498218|gb|EKZ96731.1| F0F1 ATP synthase subunit epsilon [Cupriavidus sp. HMR-1]
          Length = 138

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 1/99 (1%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  SG  GILP H P +  ++PG + + + +G  + +FV+ G + V     V ++
Sbjct: 21  KFVALPGESGELGILPGHTPLITRIQPGAVRIEKEDGGEEFVFVAGGILEVQ-PQHVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           A+ A     LD + A +    A+  L + SS+   A AQ
Sbjct: 80  ADTAIRGTDLDEAKASEAKRAAEELLQNQSSDLDLARAQ 118


>gi|406040378|ref|ZP_11047733.1| F0F1 ATP synthase subunit epsilon [Acinetobacter ursingii DSM 16037
           = CIP 107286]
          Length = 139

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 8/90 (8%)

Query: 47  SGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVD 106
            G  GILP H P + +L+PG I V    G  + ++VS G + V     V I+A+ A   D
Sbjct: 29  GGELGILPEHAPLVTLLQPGPIRVQLENGTEEIVYVSGGVLEVQ-PHVVTILADTAIRAD 87

Query: 107 SLDASA-------ARDVLSKAQSELSSASS 129
           +LD +A       A  +L+  +S+L SA++
Sbjct: 88  NLDEAAILEARKQAEQLLANQKSDLDSAAA 117


>gi|383315540|ref|YP_005376382.1| ATP synthase F1 subunit epsilon [Frateuria aurantia DSM 6220]
 gi|379042644|gb|AFC84700.1| ATP synthase, F1 epsilon subunit [Frateuria aurantia DSM 6220]
          Length = 141

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 3/99 (3%)

Query: 48  GAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDS 107
           G  GI P H P +  LKPG + V + +G  Q+ +VS G + V     V ++A+       
Sbjct: 31  GELGITPRHAPLITRLKPGYVEVEQADGKRQQFYVSGGILEVQ-PQVVSVLADTGLRAAD 89

Query: 108 LDASAARDVLSKAQSELSSASSE--TAKAEAQIAVEVAE 144
           LD +AA+     A++ L+ A  E   + A+ Q+A  +A+
Sbjct: 90  LDEAAAQKARKDAEAALAEAGPELDVSAAQQQLAESLAQ 128


>gi|323144390|ref|ZP_08078998.1| ATP synthase F1, epsilon subunit [Succinatimonas hippei YIT 12066]
 gi|322415843|gb|EFY06569.1| ATP synthase F1, epsilon subunit [Succinatimonas hippei YIT 12066]
          Length = 142

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 3/120 (2%)

Query: 37  NVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQ 96
            V+ + +    G  GI   H P L  +K G++ +   EG   + +++ G + V  D SV 
Sbjct: 21  RVRTMRITGSEGEMGIRHGHAPLLTTIKAGMVLLTTAEGKEDQFYLAGGLLEVQPD-SVT 79

Query: 97  IIAEEAHPVDSLDASAARDVLSKAQSELS--SASSETAKAEAQIAVEVAEALKIFVSSGT 154
           ++A+ A   D +D + A++ + +AQ  +   S   +  KA AQ+A  +A+   I +S  T
Sbjct: 80  VLADTALRADDIDEAKAKEAMREAQEAIKHQSGDKDYNKAFAQLAEAMAQLKVIELSRST 139


>gi|418721948|ref|ZP_13281119.1| ATP synthase F1, epsilon subunit [Leptospira borgpetersenii str. UI
           09149]
 gi|410741258|gb|EKQ90014.1| ATP synthase F1, epsilon subunit [Leptospira borgpetersenii str. UI
           09149]
          Length = 127

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 4/114 (3%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           A +++ ++ S  ++ Y  + V  + VP   G FGILPNH P +A L  GV+ + + E + 
Sbjct: 3   AHKLNVSVISPERILYKGE-VDSLVVPGSEGFFGILPNHAPLVATLGIGVLEIRKGEKL- 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSET 131
           + I V  G I V D+ +V I+ +     + +D  A +  L++ + +LS + S+ 
Sbjct: 61  KNISVEGGFIEVKDN-TVSILTDHGALKEDIDIEAEKKALAEVE-KLSPSDSKN 112


>gi|410623985|ref|ZP_11334793.1| F-type H+-transporting ATPase subunit epsilon [Glaciecola pallidula
           DSM 14239 = ACAM 615]
 gi|410156325|dbj|GAC30167.1| F-type H+-transporting ATPase subunit epsilon [Glaciecola pallidula
           DSM 14239 = ACAM 615]
          Length = 138

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 4/110 (3%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+ V V    G  GI P H P +  L+PG++ V +  G  + I+V+ G + V     V +
Sbjct: 21  VQTVQVTGIEGELGIYPGHAPLITSLQPGMVRVVKQFGAEELIYVAGGILEVQ-PGHVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELS-SASSETAKAEAQIAVEVAEAL 146
           +A+ A   + LD  AA D    A+  ++    ++   AEA  A+E++EA+
Sbjct: 80  LADTAIRAEDLDEKAAEDAKKHAEEIIAKGGGADFDYAEA--AIELSEAI 127


>gi|238765106|ref|ZP_04626040.1| ATP synthase epsilon chain [Yersinia kristensenii ATCC 33638]
 gi|238793103|ref|ZP_04636731.1| ATP synthase epsilon chain [Yersinia intermedia ATCC 29909]
 gi|238696658|gb|EEP89441.1| ATP synthase epsilon chain [Yersinia kristensenii ATCC 33638]
 gi|238727476|gb|EEQ19002.1| ATP synthase epsilon chain [Yersinia intermedia ATCC 29909]
          Length = 140

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V   S V +
Sbjct: 22  VQKIQVTGSEGELGIFPGHAPLLTAIKPGMIRIVKQFGEEEFIYLSGGILEVQ-PSVVIV 80

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  +++         AS+E AKA A++ V
Sbjct: 81  LADTAIRGTDLDEAKALESKRKAEDHINNSHGDVDYAQASAELAKAIAKLRV 132


>gi|320539770|ref|ZP_08039431.1| F1 sector of membrane-bound ATP synthase, epsilon subunit [Serratia
           symbiotica str. Tucson]
 gi|320030173|gb|EFW12191.1| F1 sector of membrane-bound ATP synthase, epsilon subunit [Serratia
           symbiotica str. Tucson]
          Length = 139

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 14/114 (12%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG++ +    G  + I++S G + V   S V +
Sbjct: 21  VQKIQVTGSEGELGIFPGHAPLLTAIKPGMVHIVNQHGEEEFIYLSGGILEVQ-PSVVTL 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSE-----------LSSASSETAKAEAQIAV 140
           +A+ A  +   D   AR + +K ++E            + AS+E AKA A++ V
Sbjct: 80  LADTA--IRGTDLDEARSLEAKYKAEEHIRNSHGDVDYAQASAELAKAIAKLRV 131


>gi|317486592|ref|ZP_07945413.1| ATP synthase [Bilophila wadsworthia 3_1_6]
 gi|345887242|ref|ZP_08838436.1| ATP synthase F1, epsilon subunit [Bilophila sp. 4_1_30]
 gi|316922192|gb|EFV43457.1| ATP synthase [Bilophila wadsworthia 3_1_6]
 gi|345042016|gb|EGW46130.1| ATP synthase F1, epsilon subunit [Bilophila sp. 4_1_30]
          Length = 134

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 65/115 (56%), Gaps = 3/115 (2%)

Query: 35  NQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSS 94
           +Q V  V VP   G FG+LP+H+  L+ L  G +  +  +G ++ +FVS G   V+D+  
Sbjct: 18  SQTVDYVGVPGIEGEFGVLPHHIALLSALAIGDL-YFRVDGKTEHVFVSGGFAEVSDN-K 75

Query: 95  VQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA-EALKI 148
           + I+AE A   + +D + A     +A++ L++ ++ET    A +A++ A E L I
Sbjct: 76  LSILAESAERGEDIDTARANAARERAEARLAAKTAETDMLRAHLALQRAVERLHI 130


>gi|300853452|ref|YP_003778436.1| F1Fo ATPase subunit epsilon [Clostridium ljungdahlii DSM 13528]
 gi|300433567|gb|ADK13334.1| F1Fo ATPase, subunit epsilon [Clostridium ljungdahlii DSM 13528]
          Length = 132

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 58/120 (48%), Gaps = 2/120 (1%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           +  T+ + ++ FY  + V +V   S  G   ILP+H+P +  LKP    + + +G   K 
Sbjct: 5   LKLTILTPDREFYEGEVV-EVITESIQGDIAILPDHMPLVTTLKPANTEIVQKDGKKLKA 63

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           F S+G + V  ++ ++I+ +     D +D   A+    +A+  L S         A++A+
Sbjct: 64  FTSTGVLEVI-NNELKILCDSCEWPDEIDIDRAKAAKERAEKRLVSQKDGVDVKRAEMAL 122


>gi|253827523|ref|ZP_04870408.1| ATP synthase subunit epsilon [Helicobacter canadensis MIT 98-5491]
 gi|313141731|ref|ZP_07803924.1| H/-transporting two-sector ATPase [Helicobacter canadensis MIT
           98-5491]
 gi|253510929|gb|EES89588.1| ATP synthase subunit epsilon [Helicobacter canadensis MIT 98-5491]
 gi|313130762|gb|EFR48379.1| H/-transporting two-sector ATPase [Helicobacter canadensis MIT
           98-5491]
          Length = 130

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 4/83 (4%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           ++D     G K+F  + NVK V +P   G FG+LP HV  +  L  GVI + + +G  + 
Sbjct: 5   KLDIVTPEG-KIF--SNNVKSVTLPGSEGEFGVLPGHVGIVTTLDSGVIEIEKQDGKKEI 61

Query: 80  IFVSSGTITVNDDSSVQIIAEEA 102
           + ++ G   VN + SV I+AE A
Sbjct: 62  VAINWGYAKVN-ERSVDILAEGA 83


>gi|392395554|ref|YP_006432156.1| ATP synthase F1 subunit epsilon [Desulfitobacterium dehalogenans
           ATCC 51507]
 gi|390526632|gb|AFM02363.1| ATP synthase, F1 epsilon subunit [Desulfitobacterium dehalogenans
           ATCC 51507]
          Length = 132

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 2/83 (2%)

Query: 43  VPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEA 102
           +P  +G  GILPNH P ++ +  GVI  Y   G  QKI  S G + V+D+  V ++A+ A
Sbjct: 26  LPGGNGEIGILPNHAPLISSIGIGVIR-YTVNGKVQKIATSGGFVEVSDN-KVTVLADTA 83

Query: 103 HPVDSLDASAARDVLSKAQSELS 125
            P + +D   A     +A+  L+
Sbjct: 84  EPGEKVDLDRALAAKERAEKRLA 106


>gi|99081925|ref|YP_614079.1| ATP synthase F0F1 subunit epsilon [Ruegeria sp. TM1040]
 gi|119367787|sp|Q1GEU9.1|ATPE_SILST RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|99038205|gb|ABF64817.1| ATP synthase F1 epsilon subunit [Ruegeria sp. TM1040]
          Length = 137

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 58/116 (50%), Gaps = 3/116 (2%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           AD M F L S  +   + Q  + V +P   G    +P H PTL  L+PG++ V   EG +
Sbjct: 2   ADTMQFDLVSPERSLASLQ-ARAVQIPGAEGDMTAMPLHAPTLTTLRPGILKVDAPEGTT 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAK 133
           +  ++ +G         + ++AE A P+D +  +   +++ +A++   +A  + ++
Sbjct: 61  E--YLVTGGFAQITAEGLSVLAERAIPMDEMTRAHLDELIEEARTMYKTAQEDNSE 114


>gi|218660807|ref|ZP_03516737.1| F0F1 ATP synthase subunit epsilon [Rhizobium etli IE4771]
          Length = 135

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 2/120 (1%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           AD  +F L S  ++  + + V +V +P+  G   ++ +H PT+  +KPGV++V    G  
Sbjct: 2   ADNFNFELVSPERLLLS-EMVTEVVIPATEGEMTVMAHHAPTMTTIKPGVVSVRSASGKK 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           Q   V  G   +   +   ++AE A PV+ L        +  A+ EL  A     K++ +
Sbjct: 61  QDYVVFGGFADIL-PTGCTLLAESAVPVEELHKDELTRRIEAARKELEHAELHEHKSKLE 119


>gi|134300980|ref|YP_001114476.1| F0F1 ATP synthase subunit epsilon [Desulfotomaculum reducens MI-1]
 gi|189081362|sp|A4J998.1|ATPE_DESRM RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|134053680|gb|ABO51651.1| ATP synthase F1 subcomplex epsilon subunit [Desulfotomaculum
           reducens MI-1]
          Length = 132

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 2/100 (2%)

Query: 44  PSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAH 103
           P   G  GILP H P +  LK G + V +  G   K+ VS G + V  +S + ++A+ A 
Sbjct: 27  PGADGELGILPEHAPLVTALKVGTLRVQQG-GKFFKVAVSGGFMEVK-NSRIVVLADTAE 84

Query: 104 PVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
             D +D   A+    +A+  L+S  SE     A+IA+  A
Sbjct: 85  RADQIDVERAKAAKQRAEQRLNSKGSEIDVHRAEIALHKA 124


>gi|149193990|ref|ZP_01871088.1| F0F1 ATP synthase subunit epsilon [Caminibacter mediatlanticus
           TB-2]
 gi|149135943|gb|EDM24421.1| F0F1 ATP synthase subunit epsilon [Caminibacter mediatlanticus
           TB-2]
          Length = 126

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 1/91 (1%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           +K+   P   G FG+L  H+P +  LKPGVIT+ +  G  + I ++ G + V  +  + +
Sbjct: 17  IKEATFPGIDGEFGVLDGHLPLVTNLKPGVITLKKDNGNEEVIAINWGYVEVTPE-HINV 75

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSSAS 128
           +AE A PV     S   + + +A+  +  A+
Sbjct: 76  LAEGAVPVTGSSESEIAEAIERAKKLIQEAA 106


>gi|218282095|ref|ZP_03488394.1| hypothetical protein EUBIFOR_00969 [Eubacterium biforme DSM 3989]
 gi|218216888|gb|EEC90426.1| hypothetical protein EUBIFOR_00969 [Eubacterium biforme DSM 3989]
          Length = 131

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 3/112 (2%)

Query: 33  YTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIF-VSSGTITVND 91
           Y  Q+VK + V +  G   ILPNH+P  A L P  + V + E   ++++ +S G +  N 
Sbjct: 13  YLKQDVKSIHVKTVIGETTILPNHMPIFASLVPCKL-VLKNENDEEEVYAISGGFLQFNK 71

Query: 92  DSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
           +  + I+A+       +D   A+  + +A+  L    S T    AQ+++E A
Sbjct: 72  NEGM-ILADAIEGKKDIDLERAKKSMERAKERLEKKDSNTNLKRAQLSLERA 122


>gi|238787861|ref|ZP_04631658.1| ATP synthase epsilon chain [Yersinia frederiksenii ATCC 33641]
 gi|238724204|gb|EEQ15847.1| ATP synthase epsilon chain [Yersinia frederiksenii ATCC 33641]
          Length = 140

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V   S V +
Sbjct: 22  VQKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQFGEEEFIYLSGGILEVQ-PSVVIV 80

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA++ +++         AS+E AKA A++ V
Sbjct: 81  LADTAIRGTDLDEAKALESKRKAEAHINNSHGDVDYAQASAELAKAIAKLRV 132


>gi|383936110|ref|ZP_09989540.1| F-type H+-transporting ATPase subunit epsilon [Rheinheimera
           nanhaiensis E407-8]
 gi|383702866|dbj|GAB59631.1| F-type H+-transporting ATPase subunit epsilon [Rheinheimera
           nanhaiensis E407-8]
          Length = 138

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 1/93 (1%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+ V V    G  GILP H P L  LKPG++ + +  G    I+V+ G + V  D ++ +
Sbjct: 21  VESVQVTGSEGELGILPFHAPLLTTLKPGMVRIVKQFGEEHVIYVAGGVLEVQPD-TITV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
           +A+ A   + LD  AA     +A+  +  A ++
Sbjct: 80  LADVAVRGEDLDEQAALAAQKRAEEAMQHAGAD 112


>gi|238759559|ref|ZP_04620721.1| ATP synthase epsilon chain [Yersinia aldovae ATCC 35236]
 gi|238702218|gb|EEP94773.1| ATP synthase epsilon chain [Yersinia aldovae ATCC 35236]
          Length = 124

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V   S V +
Sbjct: 6   VQKIQVTGSEGELGIFPGHAPLLTAIKPGMIRIVKQFGEEEFIYLSGGILEVQ-PSVVIV 64

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  +++         AS+E AKA A++ V
Sbjct: 65  LADTAIRGTDLDEAKALESKRKAEDHINNSHGDVDYAQASAELAKAIAKLRV 116


>gi|73543027|ref|YP_297547.1| F0F1 ATP synthase subunit epsilon [Ralstonia eutropha JMP134]
 gi|119367765|sp|Q46VY1.1|ATPE_RALEJ RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|72120440|gb|AAZ62703.1| ATP synthase F1 subcomplex epsilon subunit [Ralstonia eutropha
           JMP134]
          Length = 138

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 1/99 (1%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  SG  GILP H P +  ++PG + + + +G  + +FV+ G + V     V ++
Sbjct: 21  KFVALPGESGELGILPGHTPLITRIQPGAVRIEKEDGSEEFVFVAGGILEVQ-PQHVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           A+ A     LD + A++    A+  + + SS+   A AQ
Sbjct: 80  ADTAIRGTDLDEAKAQEAKRAAEELMQNQSSDLDIARAQ 118


>gi|296117270|ref|ZP_06835861.1| ATP synthase epsilon chain [Gluconacetobacter hansenii ATCC 23769]
 gi|295976163|gb|EFG82950.1| ATP synthase epsilon chain [Gluconacetobacter hansenii ATCC 23769]
          Length = 141

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 2/94 (2%)

Query: 25  LASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSS 84
           + S  K  +++     V +P   G    +P H P + +L+ GV+ +YE + ++ + FVS 
Sbjct: 7   IVSPEKTLFSH-TADMVVMPGSEGDIAAMPEHAPLMLMLRGGVVEIYEGDAIAHRFFVSG 65

Query: 85  GTITVNDDSSVQIIAEEAHPVDSLDASAARDVLS 118
           G   +  D    I+A+ A PV  L A+ A+  L+
Sbjct: 66  GFADMTPDHCT-ILADHATPVADLSATDAQSRLT 98


>gi|372000165|gb|AEX65159.1| F0F1 ATP synthase epsilon chain [Portulacaria afra]
          Length = 126

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 61/125 (48%), Gaps = 5/125 (4%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITV-YETEGVSQK 79
           ++  + + N++ Y N  VK++ +P+ SG  G+LPNH P    +  G++ +    + ++  
Sbjct: 3   LNLCVLTPNRIVY-NSEVKEIILPTNSGQIGVLPNHAPIATAVDIGILRIRLNDQWLTMA 61

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 139
           +      I  N+   + ++  EA     +D   A+  L KA++ L  A  +    EA +A
Sbjct: 62  LMGGFARIGKNE---ITVLVNEAERGSDIDPQEAQQTLEKAEANLRKAEGKRQIIEANLA 118

Query: 140 VEVAE 144
           +  A+
Sbjct: 119 LRRAK 123


>gi|260551345|ref|ZP_05825546.1| predicted protein [Acinetobacter sp. RUH2624]
 gi|260405659|gb|EEW99150.1| predicted protein [Acinetobacter sp. RUH2624]
          Length = 139

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 8/90 (8%)

Query: 47  SGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVD 106
            G  GILP H P + +L+PG I V    G  + ++VS G + V     V ++A+ A   D
Sbjct: 29  GGELGILPGHAPLVTLLQPGPIRVLLENGTEEIVYVSGGVLEVQ-PHVVTVLADTAIRAD 87

Query: 107 SLDASA-------ARDVLSKAQSELSSASS 129
           +LD +A       A  +L+  +S+L SA++
Sbjct: 88  NLDEAAILEARKNAEQLLANQKSDLDSAAA 117


>gi|424057329|ref|ZP_17794846.1| ATP synthase epsilon chain [Acinetobacter nosocomialis Ab22222]
 gi|425739158|ref|ZP_18857368.1| ATP synthase F1, epsilon subunit [Acinetobacter baumannii WC-487]
 gi|445439091|ref|ZP_21441508.1| ATP synthase F1, epsilon subunit [Acinetobacter baumannii OIFC021]
 gi|407440862|gb|EKF47379.1| ATP synthase epsilon chain [Acinetobacter nosocomialis Ab22222]
 gi|425497052|gb|EKU63165.1| ATP synthase F1, epsilon subunit [Acinetobacter baumannii WC-487]
 gi|444752400|gb|ELW77085.1| ATP synthase F1, epsilon subunit [Acinetobacter baumannii OIFC021]
          Length = 139

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 8/90 (8%)

Query: 47  SGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVD 106
            G  GILP H P + +L+PG I V    G  + ++VS G + V     V ++A+ A   D
Sbjct: 29  GGELGILPGHAPLVTLLQPGPIRVLLENGTEEIVYVSGGVLEVQ-PHVVTVLADTAIRAD 87

Query: 107 SLDASA-------ARDVLSKAQSELSSASS 129
           +LD +A       A  +L+  +S+L SA++
Sbjct: 88  NLDEAAILEARKNAEQLLANQKSDLDSAAA 117


>gi|377822093|ref|YP_004978464.1| ATP synthase F1 subunit epsilon [Burkholderia sp. YI23]
 gi|357936928|gb|AET90487.1| ATP synthase F1, epsilon subunit [Burkholderia sp. YI23]
          Length = 141

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 1/99 (1%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  +G  GILP H P +  ++PG + +   +G  + +FV+ G + +     V ++
Sbjct: 21  KFVALPGEAGELGILPGHTPLITRIRPGAVRIEAEDGTEEFVFVAGGILEIQ-PGVVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           A+ A     LD + A     +A+  + + +SE   A AQ
Sbjct: 80  ADTAIRGADLDEAKAEQAKKRAEEAIQNNTSELEYATAQ 118


>gi|190893715|ref|YP_001980257.1| F0F1 ATP synthase subunit epsilon [Rhizobium etli CIAT 652]
 gi|226740277|sp|B3PQ67.1|ATPE_RHIE6 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|190698994|gb|ACE93079.1| ATP synthase protein, epsilon subunit [Rhizobium etli CIAT 652]
          Length = 135

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 2/120 (1%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           AD  +F L S  ++  + + V +V +P+  G   ++ +H PT+  +KPG+++V    G  
Sbjct: 2   ADNFNFELVSPERLLLS-EMVTEVVIPATEGEMTVMAHHAPTMTTIKPGIVSVRSGSGKK 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           Q   V  G   +   +   ++AE A PV+ L+       +  A+ EL  A     K++ +
Sbjct: 61  QDYVVFGGFADIL-PTGCTLLAESAVPVEELNKDELTRRIEAAKKELEDAVHHEHKSKLE 119


>gi|222053554|ref|YP_002535916.1| F0F1 ATP synthase subunit epsilon [Geobacter daltonii FRC-32]
 gi|254809367|sp|B9LZ83.1|ATPE_GEOSF RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|221562843|gb|ACM18815.1| ATP synthase F1, epsilon subunit [Geobacter daltonii FRC-32]
          Length = 138

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 2/83 (2%)

Query: 48  GAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDS 107
           G FG+LP H P L  LK G ++ Y+ +GV   + ++ G   V +D  V ++ E A   D 
Sbjct: 31  GEFGVLPGHAPFLTSLKIGELS-YKKDGVISHLALNWGYFEVEND-KVTVLVETAEKADE 88

Query: 108 LDASAARDVLSKAQSELSSASSE 130
           +D   A+  L +A+  L   + E
Sbjct: 89  IDLERAKSALGRAEEALKKLNPE 111


>gi|262281305|ref|ZP_06059086.1| predicted protein [Acinetobacter calcoaceticus RUH2202]
 gi|262257131|gb|EEY75868.1| predicted protein [Acinetobacter calcoaceticus RUH2202]
          Length = 139

 Score = 49.7 bits (117), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 8/108 (7%)

Query: 47  SGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVD 106
            G  GILP H P + +L+PG I V    G  + ++VS G + V     V ++A+ A   D
Sbjct: 29  GGELGILPGHAPLVTLLQPGPIRVQLENGTEEIVYVSGGVLEVQ-PHVVTVLADTAIRAD 87

Query: 107 SLDASA-------ARDVLSKAQSELSSASSETAKAEAQIAVEVAEALK 147
           +LD +A       A  +L+  +S+L SA++  + +E    +E    +K
Sbjct: 88  NLDEAAILEARKNAEQLLANQKSDLDSAAALASLSEISGQLETIRKMK 135


>gi|257069063|ref|YP_003155318.1| F0F1-type ATP synthase, epsilon subunit [Brachybacterium faecium
           DSM 4810]
 gi|256559881|gb|ACU85728.1| F0F1-type ATP synthase, epsilon subunit [Brachybacterium faecium
           DSM 4810]
          Length = 93

 Score = 49.7 bits (117), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 2/87 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           ++ T  + ++  +T Q   QV VP+  G+ GILP   PTLAIL  G + + + +G  + +
Sbjct: 4   LEVTFVTADRTVWTGQ-AAQVVVPAIDGSMGILPQMQPTLAILGTGAVRIIDQDGHVEAL 62

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDS 107
            V  G ++V+ D  V I  ++A P +S
Sbjct: 63  DVEGGFVSVDAD-VVTIGVDDATPAES 88


>gi|402757044|ref|ZP_10859300.1| F0F1 ATP synthase subunit epsilon [Acinetobacter sp. NCTC 7422]
          Length = 139

 Score = 49.7 bits (117), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 2/110 (1%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           M   + S  +  Y+ Q V  +      G  GILP H P + +L+PG I V    G  + +
Sbjct: 4   MQCDVVSVKESIYSGQ-VTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVQLENGTEEIV 62

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
           +VS G + V     V ++A+ A   D+LD +A  +   +A++ L++  S+
Sbjct: 63  YVSGGVLEVQ-PHVVTVLADTAIRADNLDEAAIMEARKQAEALLANQKSD 111


>gi|374428668|dbj|BAL49712.1| F-type ATP synthase epsilon subunit [Hydrogenophilus
           thermoluteolus]
          Length = 145

 Score = 49.7 bits (117), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 61/110 (55%), Gaps = 7/110 (6%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           + V +P  +G  G+LP H P L  ++PG + V   +   + IFVS G + V  +  V ++
Sbjct: 22  EMVVLPGEAGELGVLPGHAPLLTRIRPGTVRVKTPDHGEEIIFVSGGILEVQPN-LVTVL 80

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELS----SASSETAKAEAQIAVEVAE 144
           A+ A  V   D   AR + +K ++E +    +A+ + AKA+A++A  VA+
Sbjct: 81  ADTA--VRGADLDEARAIEAKRRAEEALQNRNAAIDYAKAQAELAEAVAQ 128


>gi|377819384|ref|YP_005097880.1| ATP synthase CF1 epsilon subunit (chloroplast) [Colocasia
           esculenta]
 gi|340536645|gb|AEK48412.1| ATP synthase CF1 epsilon subunit (chloroplast) [Colocasia
           esculenta]
 gi|340536732|gb|AEK48498.1| ATP synthase CF1 epsilon subunit (chloroplast) [Colocasia
           esculenta]
          Length = 135

 Score = 49.7 bits (117), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/124 (22%), Positives = 62/124 (50%), Gaps = 2/124 (1%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           ++  + + N++ + ++ VK++ + + SG  G+LPNH P    +  G++ +   +G    +
Sbjct: 3   LNLCVLTPNRIIWDSE-VKEIILSTNSGQIGVLPNHAPIATAVDIGLLRIRLNDGRWLTV 61

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
            +  G   + ++  + I+  +A     +D   A+  L KA++ LS A  +    EA +A+
Sbjct: 62  ALMGGFARIGNN-EITILGNDAEISTDIDLQEAQQALEKAEANLSKAEGKRQAIEANLAL 120

Query: 141 EVAE 144
             A 
Sbjct: 121 RRAR 124


>gi|428772507|ref|YP_007164295.1| ATP synthase F1 subcomplex subunit epsilon [Cyanobacterium stanieri
           PCC 7202]
 gi|428686786|gb|AFZ46646.1| ATP synthase F1 subcomplex epsilon subunit [Cyanobacterium stanieri
           PCC 7202]
          Length = 134

 Score = 49.7 bits (117), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 2/95 (2%)

Query: 35  NQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSS 94
           +Q+ ++V +PS SG  GIL +H P L  L  GV+ V  TE   + I V  G   V +++ 
Sbjct: 16  DQDAQEVILPSGSGQLGILTDHAPLLTNLDIGVLRV-RTEKDWKSIAVMGGFAEV-ENNE 73

Query: 95  VQIIAEEAHPVDSLDASAARDVLSKAQSELSSASS 129
           V+++   A   +S+D   A+  L  AQ+EL SA++
Sbjct: 74  VKVLVNGAELGESIDKETAKADLETAQNELQSANA 108


>gi|71082934|ref|YP_265653.1| ATP synthase F1 subunit epsilon [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|91762642|ref|ZP_01264607.1| ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit)
           [Candidatus Pelagibacter ubique HTCC1002]
 gi|119367754|sp|Q4FP39.1|ATPE_PELUB RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|71062047|gb|AAZ21050.1| ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit)
           [Candidatus Pelagibacter ubique HTCC1062]
 gi|91718444|gb|EAS85094.1| ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit)
           [Candidatus Pelagibacter ubique HTCC1002]
          Length = 130

 Score = 49.7 bits (117), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 23/92 (25%), Positives = 50/92 (54%), Gaps = 2/92 (2%)

Query: 30  KVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITV 89
           K F + ++V +V VP+F G  GIL +H+  ++ LKPG+I ++   G     +V  G +  
Sbjct: 14  KSFLSKEDVTEVVVPAFEGEMGILKDHISIISFLKPGIIKIFSKSG-EDNYYVEDGIVEF 72

Query: 90  NDDSSVQIIAEEAHPVDSLDASAARDVLSKAQ 121
             ++++ ++      +  +D     ++L++A+
Sbjct: 73  K-NNNLSVLTSSIFNIKDIDKDKISELLTQAE 103


>gi|348617863|ref|ZP_08884397.1| ATP synthase epsilon chain [Candidatus Glomeribacter gigasporarum
           BEG34]
 gi|347816807|emb|CCD29047.1| ATP synthase epsilon chain [Candidatus Glomeribacter gigasporarum
           BEG34]
          Length = 144

 Score = 49.7 bits (117), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 1/90 (1%)

Query: 41  VDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAE 100
           V++P   GA GILP H P +  ++ G + +    G  + IFV+ G + V  D  V ++A+
Sbjct: 27  VELPGAMGALGILPGHAPLMTRIRAGAVQIKTVGGAEELIFVAGGILEVQPD-EVTVLAD 85

Query: 101 EAHPVDSLDASAARDVLSKAQSELSSASSE 130
            A   + L+ + A+     A++ L +  S+
Sbjct: 86  TAVRGEDLEEAKAQQARQTAEAALRNTRSK 115


>gi|307250940|ref|ZP_07532866.1| ATP synthase epsilon chain [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|306856968|gb|EFM89098.1| ATP synthase epsilon chain [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
          Length = 139

 Score = 49.7 bits (117), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 5/132 (3%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           A Q + ++ S  K  + N NV  V V    G  G+   H+P L  +KPG++     +G  
Sbjct: 2   ASQFELSVVSAEKEIF-NGNVVSVRVTGIDGELGVYAGHMPLLTSIKPGMVKYTLEDGKE 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           + I+VS G + V   + V ++A+ A   + LD    R + +K ++E + + S  A+  A+
Sbjct: 61  EFIYVSGGFLEVQ-PTIVTVLADVAIRGEELDQQ--RILAAKRKAEDTLSKSNNAELSAK 117

Query: 138 IAVEVAEALKIF 149
           ++ E+A+ L+++
Sbjct: 118 LSREIAK-LRVY 128


>gi|225572846|ref|ZP_03781601.1| hypothetical protein RUMHYD_01037 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039772|gb|EEG50018.1| ATP synthase F1, epsilon subunit [Blautia hydrogenotrophica DSM
           10507]
          Length = 141

 Score = 49.7 bits (117), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%)

Query: 29  NKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTIT 88
           +KVF+  Q  + +++P   G + ILP+H   +AIL PG++T+ + +G   +  VSSG + 
Sbjct: 18  DKVFFRGQ-AQAMNLPVIGGPWMILPHHEDLIAILVPGLMTIRQEDGTEMEAVVSSGMVE 76

Query: 89  VNDDSSVQIIAEEAHPVD 106
             ++S    +    +P D
Sbjct: 77  FVNNSGKIFVHSAENPAD 94


>gi|94263071|ref|ZP_01286890.1| H+-transporting two-sector ATPase, delta/epsilon subunit [delta
           proteobacterium MLMS-1]
 gi|94266420|ref|ZP_01290115.1| H+-transporting two-sector ATPase, delta/epsilon subunit [delta
           proteobacterium MLMS-1]
 gi|93452962|gb|EAT03461.1| H+-transporting two-sector ATPase, delta/epsilon subunit [delta
           proteobacterium MLMS-1]
 gi|93456614|gb|EAT06722.1| H+-transporting two-sector ATPase, delta/epsilon subunit [delta
           proteobacterium MLMS-1]
          Length = 137

 Score = 49.7 bits (117), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 2/98 (2%)

Query: 36  QNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSV 95
           + V+ V  P ++G FG+L NH P L+ +K G + VY+ +G    + +S G   V+++ + 
Sbjct: 19  EEVEIVTAPGYAGVFGVLANHAPLLSTIKVGNL-VYKKDGRDHMVTISGGFCEVSNNKAT 77

Query: 96  QIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAK 133
            ++ E A     +DA  A     +A+  L+ A ++  K
Sbjct: 78  FLV-ESAERGAEIDADRALRAKERAEKRLAEAVAQKEK 114


>gi|373498958|ref|ZP_09589454.1| ATP synthase F1, epsilon subunit [Fusobacterium sp. 12_1B]
 gi|404369396|ref|ZP_10974735.1| ATP synthase F1, epsilon subunit [Fusobacterium ulcerans ATCC
           49185]
 gi|313690593|gb|EFS27428.1| ATP synthase F1, epsilon subunit [Fusobacterium ulcerans ATCC
           49185]
 gi|371959849|gb|EHO77522.1| ATP synthase F1, epsilon subunit [Fusobacterium sp. 12_1B]
          Length = 134

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 9/111 (8%)

Query: 43  VPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEA 102
           V +  G  GILPNH P +A L  G + +    G  +  FVS G + ++++ +V ++A+EA
Sbjct: 25  VRTTEGEMGILPNHSPFVAGLAIGEMKI-RLNGEEKCYFVSGGFLEISNN-NVTVLADEA 82

Query: 103 HPVDSLDASAARDVLSKAQSELSSAS-------SETAKAEAQIAVEVAEAL 146
            P + +D   AR    +A+++L           +E    EA + V +AE L
Sbjct: 83  MPCEMIDLERARKEAEEAKAKLDKLKEDKDILLTEKNLNEALVKVRLAERL 133


>gi|317121019|ref|YP_004101022.1| ATP synthase F1 subcomplex subunit epsilon [Thermaerobacter
           marianensis DSM 12885]
 gi|315590999|gb|ADU50295.1| ATP synthase F1 subcomplex epsilon subunit [Thermaerobacter
           marianensis DSM 12885]
          Length = 140

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 23/120 (19%)

Query: 35  NQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSS 94
            + V  + VP   G  G+LP+H P +A LK G++T Y   G  +++ V+ G   V D+ +
Sbjct: 19  REEVDSLIVPGAEGLLGVLPDHAPMVAALKIGILT-YRKNGEKRRVAVAGGFFEVADNHA 77

Query: 95  VQI--IAEEAHPVD--------------------SLDASAARDVLSKAQSELSSASSETA 132
           V +   AE A  +D                    + D   AR  L++A + L +A ++T 
Sbjct: 78  VVLSDAAERAEEIDVVRARAAAERARRRLAERDANWDFERARAALNRALNRLRAAGADTG 137


>gi|452127072|ref|ZP_21939655.1| F0F1 ATP synthase subunit epsilon [Bordetella holmesii F627]
 gi|452130444|ref|ZP_21943016.1| F0F1 ATP synthase subunit epsilon [Bordetella holmesii H558]
 gi|451920369|gb|EMD70515.1| F0F1 ATP synthase subunit epsilon [Bordetella holmesii H558]
 gi|451922167|gb|EMD72312.1| F0F1 ATP synthase subunit epsilon [Bordetella holmesii F627]
          Length = 141

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  SG  GILP H P ++ ++PG + +   +   + IFV+ G + V    SV ++
Sbjct: 21  KFVVLPGESGELGILPGHTPLISRIRPGTVKIVRADEGEENIFVAGGILEVQ-PGSVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSAS 128
           A+ A     LD + A     KA+  L +A 
Sbjct: 80  ADTAIRAADLDEARALAAREKAEEALRNAK 109


>gi|33594187|ref|NP_881831.1| ATP synthase F0F1 subunit epsilon [Bordetella pertussis Tohama I]
 gi|33598625|ref|NP_886268.1| F0F1 ATP synthase subunit epsilon [Bordetella parapertussis 12822]
 gi|33603576|ref|NP_891136.1| F0F1 ATP synthase subunit epsilon [Bordetella bronchiseptica RB50]
 gi|384205487|ref|YP_005591226.1| F0F1 ATP synthase subunit epsilon [Bordetella pertussis CS]
 gi|408414415|ref|YP_006625122.1| ATP synthase subunit epsilon [Bordetella pertussis 18323]
 gi|410422053|ref|YP_006902502.1| ATP synthase subunit epsilon [Bordetella bronchiseptica MO149]
 gi|410474653|ref|YP_006897934.1| ATP synthase subunit epsilon [Bordetella parapertussis Bpp5]
 gi|412341100|ref|YP_006969855.1| ATP synthase subunit epsilon [Bordetella bronchiseptica 253]
 gi|427816587|ref|ZP_18983651.1| ATP synthase epsilon chain [Bordetella bronchiseptica 1289]
 gi|427820080|ref|ZP_18987143.1| ATP synthase epsilon chain [Bordetella bronchiseptica D445]
 gi|427822669|ref|ZP_18989731.1| ATP synthase epsilon chain [Bordetella bronchiseptica Bbr77]
 gi|60389742|sp|Q7VU43.1|ATPE_BORPE RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|60389744|sp|Q7W3B1.1|ATPE_BORPA RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|60389746|sp|Q7WEN0.1|ATPE_BORBR RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|33564262|emb|CAE43554.1| ATP synthase epsilon chain [Bordetella pertussis Tohama I]
 gi|33574754|emb|CAE39413.1| ATP synthase epsilon chain [Bordetella parapertussis]
 gi|33577701|emb|CAE34966.1| ATP synthase epsilon chain [Bordetella bronchiseptica RB50]
 gi|332383601|gb|AEE68448.1| F0F1 ATP synthase subunit epsilon [Bordetella pertussis CS]
 gi|401776585|emb|CCJ61789.1| ATP synthase epsilon chain [Bordetella pertussis 18323]
 gi|408444763|emb|CCJ51537.1| ATP synthase epsilon chain [Bordetella parapertussis Bpp5]
 gi|408449348|emb|CCJ61036.1| ATP synthase epsilon chain [Bordetella bronchiseptica MO149]
 gi|408770934|emb|CCJ55733.1| ATP synthase epsilon chain [Bordetella bronchiseptica 253]
 gi|410567587|emb|CCN25158.1| ATP synthase epsilon chain [Bordetella bronchiseptica 1289]
 gi|410571080|emb|CCN19289.1| ATP synthase epsilon chain [Bordetella bronchiseptica D445]
 gi|410587934|emb|CCN02984.1| ATP synthase epsilon chain [Bordetella bronchiseptica Bbr77]
          Length = 140

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 7/118 (5%)

Query: 27  SGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGT 86
           S  +  +T +  K V +P  +G  GILP H P ++ ++PG + +   +   + IFV+ G 
Sbjct: 10  SAEEAIFTGE-AKFVVLPGEAGELGILPGHTPLISRIRPGTVKIVRADEGEENIFVAGGI 68

Query: 87  ITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVAE 144
           + V    SV ++A+ A  + + D   AR V ++ ++E    +   AK +A IAV  AE
Sbjct: 69  LEVQ-PGSVTVLADTA--IRAADLDEARAVAAREKAE---EALRNAKDKADIAVVEAE 120


>gi|145301171|ref|YP_001144012.1| F0F1 ATP synthase subunit epsilon [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|418362563|ref|ZP_12963193.1| F0F1 ATP synthase subunit epsilon [Aeromonas salmonicida subsp.
           salmonicida 01-B526]
 gi|142853943|gb|ABO92264.1| F0F1 ATP synthase subunit epsilon [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|356686256|gb|EHI50863.1| F0F1 ATP synthase subunit epsilon [Aeromonas salmonicida subsp.
           salmonicida 01-B526]
          Length = 142

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 13/130 (10%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
            +D   A G K+F  +  V+   V    G  G+   H P L  +KPG++ + +  G  + 
Sbjct: 8   HLDVVSAEG-KLF--SGRVQSAQVSGLEGELGLRHGHAPLLTAIKPGLVRLVKQNGAEEV 64

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSE 130
           +++S G + V  + SV ++A+ A     LD + A +    A++ + S         A++E
Sbjct: 65  LYISGGMLEVQPE-SVTVLADTAIRAKDLDEAKALEAKRAAEARIHSSHGDIDYAQAATE 123

Query: 131 TAKAEAQIAV 140
            AKA AQ+ V
Sbjct: 124 LAKAMAQLRV 133


>gi|255525814|ref|ZP_05392743.1| ATP synthase F1, epsilon subunit [Clostridium carboxidivorans P7]
 gi|255510457|gb|EET86768.1| ATP synthase F1, epsilon subunit [Clostridium carboxidivorans P7]
          Length = 132

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 2/123 (1%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           A+    T+ +  K FY  + V+ +   +  G  GIL NH+P +  L+P V     ++G  
Sbjct: 2   ANAFKLTILTPEKEFYIGEVVELI-TDTTQGRIGILANHMPLVTPLRPTVTEFTTSDGKE 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
            K F SSG + V  D+ V+ + +     + +D   A+    +A++ L+          A+
Sbjct: 61  LKAFTSSGILDVK-DNLVEFLCDSCEWPEDIDLERAKSAKERAENRLAEPKDNVDIKRAE 119

Query: 138 IAV 140
           +A+
Sbjct: 120 LAL 122


>gi|413964112|ref|ZP_11403339.1| F0F1 ATP synthase subunit epsilon [Burkholderia sp. SJ98]
 gi|413929944|gb|EKS69232.1| F0F1 ATP synthase subunit epsilon [Burkholderia sp. SJ98]
          Length = 141

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 1/99 (1%)

Query: 39  KQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
           K V +P  +G  GILP H P +  ++PG + +   +G  + +FV+ G + +     V ++
Sbjct: 21  KFVALPGEAGELGILPGHTPLITRIRPGAVRIEAEDGTEEFVFVAGGILEIQ-PGIVTVL 79

Query: 99  AEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           A+ A     LD + A     +A+  + + +SE   A AQ
Sbjct: 80  ADTAIRGADLDEAKAEQAKKRAEEAIQNNTSELEYATAQ 118


>gi|372000159|gb|AEX65156.1| F0F1 ATP synthase epsilon chain [Didierea madagascariensis]
          Length = 133

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 61/125 (48%), Gaps = 5/125 (4%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITV-YETEGVSQK 79
           ++  + + N++ Y N  VK++ +P+ SG  G+LPNH P    +  G++ +    + ++  
Sbjct: 3   LNLCVLTPNRIVY-NSEVKEIILPTNSGQIGVLPNHAPIATAVDIGILRIRLNDQWLTMA 61

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 139
           +      I  N+   + ++  EA     +D   A+  L KA++ L  A  +    EA +A
Sbjct: 62  LMGGFARIGNNE---ITVLVNEAERGSDIDPQEAQQTLEKAEANLRKAEGKRQIIEANLA 118

Query: 140 VEVAE 144
           +  A+
Sbjct: 119 LRRAK 123


>gi|209696442|ref|YP_002264373.1| F0F1 ATP synthase subunit epsilon [Aliivibrio salmonicida LFI1238]
 gi|208010396|emb|CAQ80742.1| ATP synthase epsilon subunit [Aliivibrio salmonicida LFI1238]
          Length = 140

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+ + V    G  GI   H P L  + PG++ + +  G  + I+VS G + V   S+  +
Sbjct: 22  VETIQVTGSEGELGIFHGHTPLLTAITPGMVRIVKQHGHEEYIYVSGGIVEVQPGSAT-V 80

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A   + LDA+ A +   KA+  + +         A+S+ AKA AQ+ V
Sbjct: 81  LADTAIRGEDLDAAKAEEAKRKAEENIKNQHGDINFAQAASDLAKAIAQLRV 132


>gi|50083470|ref|YP_044980.1| F0F1 ATP synthase subunit epsilon [Acinetobacter sp. ADP1]
 gi|60389585|sp|Q6FFJ9.1|ATPE_ACIAD RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|49529446|emb|CAG67158.1| membrane-bound ATP synthase , F1 sector, epsilon-subunit
           [Acinetobacter sp. ADP1]
          Length = 139

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 9/116 (7%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           M   + S  +  Y+ Q V  +      G  GILP H P + +L+PG I V    G  + +
Sbjct: 4   MQCDVVSVKESIYSGQ-VTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVQLENGTEEIV 62

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASA-------ARDVLSKAQSELSSASS 129
           +VS G + V     V ++A+ A   D+LD +A       A  +L+  +S+L SA++
Sbjct: 63  YVSGGVLEVQ-PHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAA 117


>gi|51209971|ref|YP_063635.1| ATP synthase CF1 epsilon subunit [Gracilaria tenuistipitata var.
           liui]
 gi|60389561|sp|Q6B8S5.1|ATPE_GRATL RecName: Full=ATP synthase epsilon chain, chloroplastic; AltName:
           Full=ATP synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|50657725|gb|AAT79710.1| ATP synthase CF1 epsilon subunit [Gracilaria tenuistipitata var.
           liui]
          Length = 134

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 2/100 (2%)

Query: 37  NVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQ 96
           N ++V +PS +G  GIL  H+P L  +  GV+ V   E   Q I +  G   V DD  + 
Sbjct: 18  NAEEVILPSSTGQVGILKGHIPLLTAIDIGVMRV-RIEKEWQPIILLGGFAEVKDD-KIT 75

Query: 97  IIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEA 136
           I+   A  V  ++  AA++ L KA   L+ A ++  K EA
Sbjct: 76  ILVNGAEEVSKIEIKAAKENLEKATKILNEARNDKDKIEA 115


>gi|422021286|ref|ZP_16367799.1| F0F1 ATP synthase subunit epsilon [Providencia sneebia DSM 19967]
 gi|414099755|gb|EKT61394.1| F0F1 ATP synthase subunit epsilon [Providencia sneebia DSM 19967]
          Length = 137

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 15/129 (11%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
            T+ S  K  + +  V++V V    G  GI P H P L  +KPG++ + +  G  + I++
Sbjct: 5   LTVVSAEKQMF-DGLVQKVQVTGSEGELGIYPQHTPLLTAIKPGMVRITKQFGEEELIYL 63

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSE-----------LSSASSET 131
           S G + V  +  + ++A+ A  +   D   AR + SK ++E            + AS+E 
Sbjct: 64  SGGILEVQPNGVI-VLADTA--IRGKDLDEARALESKRRAEEHVRKAHGDVDYAQASAEL 120

Query: 132 AKAEAQIAV 140
           AKA A++ V
Sbjct: 121 AKAIAKLRV 129


>gi|262376923|ref|ZP_06070150.1| ATP synthase F1, epsilon subunit [Acinetobacter lwoffii SH145]
 gi|262308268|gb|EEY89404.1| ATP synthase F1, epsilon subunit [Acinetobacter lwoffii SH145]
          Length = 139

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)

Query: 47  SGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVD 106
            G  GI+P H P + +L+PG I V    G  + I+VS G + V     V ++A+ A   D
Sbjct: 29  GGELGIMPGHAPLVTLLQPGAIRVILENGTEELIYVSGGVLEVQ-PHVVTVLADTAIRAD 87

Query: 107 SLDASAARDVLSKAQSELSSASSE 130
           +LD +A  +    A++ L++  S+
Sbjct: 88  NLDEAAILEARKHAEALLANQKSD 111


>gi|227113922|ref|ZP_03827578.1| F0F1 ATP synthase subunit epsilon [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
 gi|227327855|ref|ZP_03831879.1| F0F1 ATP synthase subunit epsilon [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
 gi|403060677|ref|YP_006648894.1| F0F1 ATP synthase subunit epsilon [Pectobacterium carotovorum
           subsp. carotovorum PCC21]
 gi|402808003|gb|AFR05641.1| F0F1 ATP synthase subunit epsilon [Pectobacterium carotovorum
           subsp. carotovorum PCC21]
          Length = 139

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 1/99 (1%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G + V  +  V +
Sbjct: 21  VQKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGEEEYIYLSGGVLEVQPN-IVTV 79

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEA 136
           +++ A     LD + A +   KA+  + ++  +   A+A
Sbjct: 80  LSDTAIRGQDLDEARALEAKRKAEDHIRNSHGDVDYAQA 118


>gi|32490758|ref|NP_871012.1| hypothetical protein WGLp009 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|31339980|sp|Q8D3J2.1|ATPE_WIGBR RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|25165964|dbj|BAC24155.1| atpC [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 138

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 11/127 (8%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
            T+ S     ++N  VK+ ++    G  GILP H P +  +KPG+I +  ++ + + I++
Sbjct: 8   LTVISAENFIFSNL-VKKSNITGSEGNLGILPGHAPLITKIKPGLIHIISSKNIEEYIYL 66

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARD---------VLSKAQSELSSASSETAK 133
           S G + +N +  V ++A+ A     +D   A +         + SK + E   A  E +K
Sbjct: 67  SGGILEINSN-VVTVLADTAIRGKEIDEKKAIESKKNAEELILKSKERHEYIRAVIELSK 125

Query: 134 AEAQIAV 140
           A A++ V
Sbjct: 126 AIAKLRV 132


>gi|326797427|ref|YP_004315247.1| ATP synthase subunit epsilon [Marinomonas mediterranea MMB-1]
 gi|326548191|gb|ADZ93411.1| ATP synthase epsilon chain [Marinomonas mediterranea MMB-1]
          Length = 138

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 18/104 (17%)

Query: 48  GAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSG-------TITVNDDSSVQIIAE 100
           G  GI+P H P L  L+PG + V +  G  + IFVS G        ITV  D++V+    
Sbjct: 31  GDLGIMPGHAPLLTSLQPGPVRVVKENGEEELIFVSGGFLEVQPRKITVLADTAVR---- 86

Query: 101 EAHPVDSLDA----SAARDVLSKAQSEL--SSASSETAKAEAQI 138
            AH +D  +A      A+D+L + Q+++    A++E A+A A++
Sbjct: 87  -AHDLDEAEALEAKKHAQDLLEQQQADIDYGRATAELAEAVARL 129


>gi|254466359|ref|ZP_05079770.1| ATP synthase F1, epsilon subunit [Rhodobacterales bacterium Y4I]
 gi|206687267|gb|EDZ47749.1| ATP synthase F1, epsilon subunit [Rhodobacterales bacterium Y4I]
          Length = 137

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 3/113 (2%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           A  M F L S  +   + Q V  V +P   G    +P+H PT+  L+PGV+ V   EG +
Sbjct: 2   AQTMQFDLVSPERALASLQ-VSAVQIPGAEGDMTAMPSHAPTITTLRPGVLKVESPEG-N 59

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
            +  V+ G   +  D S+ ++AE A P+  +      +++ +A+    +A  E
Sbjct: 60  AEYLVTGGFAEIAGD-SLSVLAERAIPMTEMTRDQMNELIEEAREMYKTAKEE 111


>gi|354599794|ref|ZP_09017811.1| ATP synthase epsilon chain [Brenneria sp. EniD312]
 gi|353677729|gb|EHD23762.1| ATP synthase epsilon chain [Brenneria sp. EniD312]
          Length = 140

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG++ + +  G  + I++S G + V  +  V +
Sbjct: 22  VQKIQVTGSEGELGIYPGHAPLLTAIKPGMVRIVKQHGEEEYIYLSGGILEVQPN-MVTV 80

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +++ A     LD + A +   KA+  + +         AS+E +KA A++ V
Sbjct: 81  LSDTAIRGQDLDEARALEAKRKAEDHIRNSHGDVDYAQASAELSKAIAKLRV 132


>gi|301353386|ref|YP_003795586.1| ATP synthase CF1 epsilon subunit [Pteridium aquilinum subsp.
           aquilinum]
 gi|301016304|gb|ADK47591.1| ATP synthase CF1 epsilon subunit [Pteridium aquilinum subsp.
           aquilinum]
          Length = 132

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 3/125 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           ++  + + N++ + N  V ++   + SG  GILPNH P L  L  GV  +      S   
Sbjct: 3   LNLRVMAPNRIVW-NSEVWEIVSSTNSGQIGILPNHAPLLTALDMGVSRIRHDGQWSA-- 59

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
               G   + D + V I+  EA     +D   AR     AQ++L+ A  +    EA +A 
Sbjct: 60  MAPMGGFAMIDSNQVTILVNEAERATEIDPEEARKSFQAAQADLAKAEGKKKVIEANLAF 119

Query: 141 EVAEA 145
           + A+A
Sbjct: 120 KRAKA 124


>gi|157964050|ref|YP_001504084.1| F0F1 ATP synthase subunit epsilon [Shewanella pealeana ATCC 700345]
 gi|189081379|sp|A8HAG2.1|ATPE_SHEPA RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|157849050|gb|ABV89549.1| ATP synthase F1, epsilon subunit [Shewanella pealeana ATCC 700345]
          Length = 142

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 4/111 (3%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           Q+D   A  N +F  +  V Q+ V    G  GI+P H   L  +KPG+  + +  G S++
Sbjct: 7   QLDMVSAE-NHIF--SGRVAQLQVSGTEGELGIMPGHAALLTSIKPGMARIVKQNG-SEE 62

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
           +F  SG I     SS+ ++A+     D +D  AA +   +A++ ++ A ++
Sbjct: 63  VFYLSGGILEVQPSSISVLADVVLRADEIDEQAAAEAKLRAETAMAGAGAD 113


>gi|451947324|ref|YP_007467919.1| ATP synthase, F1 epsilon subunit [Desulfocapsa sulfexigens DSM
           10523]
 gi|451906672|gb|AGF78266.1| ATP synthase, F1 epsilon subunit [Desulfocapsa sulfexigens DSM
           10523]
          Length = 137

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 2/95 (2%)

Query: 36  QNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSV 95
           ++V  V+ P + G FG+L NH P L+ +K G++T    +G ++K  + SG  +   ++ +
Sbjct: 19  EDVDIVNAPGYGGDFGVLANHAPFLSTIKIGILTY--AQGNNRKSLMISGGFSEVSNNKI 76

Query: 96  QIIAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
             + E A    S+D   A     +A+  L+ A++ 
Sbjct: 77  TFLVESAESGSSIDVDRAMKAKERAEKRLAQAAAH 111


>gi|119896452|ref|YP_931665.1| F0F1 ATP synthase subunit epsilon [Azoarcus sp. BH72]
 gi|166222431|sp|A1K1S3.1|ATPE_AZOSB RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|119668865|emb|CAL92778.1| probable ATP synthase epsilon chain [Azoarcus sp. BH72]
          Length = 141

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 2/98 (2%)

Query: 41  VDVPSFSGAFGILPNHVPTLAILKPGVITV-YETEGVSQKIFVSSGTITVNDDSSVQIIA 99
           V +P  +G  GILP H+P +  +KPG + V  + +   + +FV+ G + V     V ++A
Sbjct: 24  VALPGEAGELGILPGHMPLMTRIKPGAVRVKVQNQAEEEVVFVAGGLLEVQ-PGLVTVLA 82

Query: 100 EEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           + A     LD + A +   KA+  L++ SS+   A+AQ
Sbjct: 83  DTAIRGKDLDEAKALEAKRKAEEALANQSSQLDYAKAQ 120


>gi|358013165|ref|ZP_09144975.1| F0F1 ATP synthase subunit epsilon [Acinetobacter sp. P8-3-8]
          Length = 139

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)

Query: 47  SGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVD 106
            G  GI+P H P + +LKPG I V    G  + I+VS G + V     V ++A+ A   +
Sbjct: 29  GGELGIMPGHAPLVTLLKPGAIRVLLENGTEELIYVSGGVLEVQ-PHVVTVLADTAVRAE 87

Query: 107 SLDASAARDVLSKAQSELSSASSETAKAEA 136
           +LD +A  +    A+  L++  S+   A A
Sbjct: 88  NLDEAAILEARKNAEQLLANQKSDVDTAAA 117


>gi|418241600|ref|ZP_12868126.1| F0F1 ATP synthase subunit epsilon [Yersinia enterocolitica subsp.
           palearctica PhRBD_Ye1]
 gi|351779014|gb|EHB21141.1| F0F1 ATP synthase subunit epsilon [Yersinia enterocolitica subsp.
           palearctica PhRBD_Ye1]
          Length = 140

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG+I + +  G  + I++S G   V   S V +
Sbjct: 22  VQKIQVTGSEGELGIFPGHAPLLTAIKPGMIRIVKQFGEEEFIYLSGGIFEVQ-PSVVIV 80

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS---------ASSETAKAEAQIAV 140
           +A+ A     LD + A +   KA+  +++         AS+E AKA A++ V
Sbjct: 81  LADTAIRGTDLDEAKALESKRKAEEHINNSHGDVDYAQASAELAKAIAKLRV 132


>gi|257459079|ref|ZP_05624198.1| ATP synthase F1, epsilon subunit [Campylobacter gracilis RM3268]
 gi|257443464|gb|EEV18588.1| ATP synthase F1, epsilon subunit [Campylobacter gracilis RM3268]
          Length = 134

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 5/106 (4%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILK----PGVITVYETEGVSQKIFVSSGTITVNDDS 93
           VK V +P  +G  GILP H   L  LK     GV+ + + +G  Q + V+ G + V ++ 
Sbjct: 21  VKSVQLPGITGEMGILPGHASLLTGLKDKSEGGVVEIVDKDGKKQLVLVNDGFLEVTEEK 80

Query: 94  SVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 139
           +  I+A +A  +     SA    L +A+  L+S SS+ A + A +A
Sbjct: 81  TT-ILATQAVAIGGDSESAVAKSLQRAKDMLTSISSDAANSAAIMA 125


>gi|299771941|ref|YP_003733967.1| F0F1 ATP synthase subunit epsilon [Acinetobacter oleivorans DR1]
 gi|298702029|gb|ADI92594.1| F0F1 ATP synthase subunit epsilon [Acinetobacter oleivorans DR1]
          Length = 139

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 8/90 (8%)

Query: 47  SGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVD 106
            G  GILP H P + +L+PG I V    G  + ++VS G + V     V ++A+ A   D
Sbjct: 29  GGELGILPGHAPLVTLLQPGPIRVQLENGTEEIVYVSGGVLEVQ-PHVVTVLADTAIRAD 87

Query: 107 SLDASA-------ARDVLSKAQSELSSASS 129
           +LD +A       A  +L+  +S+L SA++
Sbjct: 88  NLDEAAILEARKNAEQLLANQKSDLDSAAA 117


>gi|412990852|emb|CCO18224.1| predicted protein [Bathycoccus prasinos]
          Length = 181

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 39/61 (63%), Gaps = 2/61 (3%)

Query: 20  QMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQK 79
           +++F L   ++  + +  V  V VP+ +G FGILP HVP +A L+PGV++V   E V+ +
Sbjct: 116 KLNFRLP--HEAVFADAEVNMVLVPAETGDFGILPGHVPVVAKLRPGVVSVENKESVTSR 173

Query: 80  I 80
           +
Sbjct: 174 V 174


>gi|262374658|ref|ZP_06067931.1| ATP synthase F1, epsilon subunit [Acinetobacter junii SH205]
 gi|262310448|gb|EEY91539.1| ATP synthase F1, epsilon subunit [Acinetobacter junii SH205]
          Length = 139

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)

Query: 47  SGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVD 106
            G  GILP H P + +L+PG I V    G  + ++VS G + V     V ++A+ A   D
Sbjct: 29  GGELGILPGHAPLVTLLQPGPIRVQLENGTEEIVYVSGGVLEVQ-PHVVTVLADSAIRAD 87

Query: 107 SLDASAARDVLSKAQSELSSASSE 130
           +LD +A  +   +A+  L++  S+
Sbjct: 88  NLDEAAIMEARKQAEQLLANQKSD 111


>gi|319778926|ref|YP_004129839.1| ATP synthase subunit epsilon [Taylorella equigenitalis MCE9]
 gi|317108950|gb|ADU91696.1| ATP synthase epsilon chain [Taylorella equigenitalis MCE9]
 gi|399115639|emb|CCG18442.1| ATP synthase epsilon chain [Taylorella equigenitalis 14/56]
          Length = 142

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 48/89 (53%), Gaps = 1/89 (1%)

Query: 41  VDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAE 100
           V +P  +G  G+LP H P ++ +KPG + +   +G  + +FV+ G + V    +V ++A+
Sbjct: 25  VVLPGVTGEIGVLPGHTPLISRIKPGRVKITREDGSEETLFVAGGLLEVQ-PFAVTVLAD 83

Query: 101 EAHPVDSLDASAARDVLSKAQSELSSASS 129
               ++ LD   A +   +A+    +A+S
Sbjct: 84  TVVRMEDLDEQKALEARKRAEESRKNATS 112


>gi|254418464|ref|ZP_05032188.1| ATP synthase, Delta/Epsilon chain, beta-sandwich domain
           [Brevundimonas sp. BAL3]
 gi|196184641|gb|EDX79617.1| ATP synthase, Delta/Epsilon chain, beta-sandwich domain
           [Brevundimonas sp. BAL3]
          Length = 89

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 3/85 (3%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           A ++ F+L S  +  ++   V QVD P   G FG+LP+H P +  L+ G++TVY     +
Sbjct: 2   AGKLSFSLVSPEREVFSGL-VDQVDAPGVEGDFGVLPDHAPFMTALREGLVTVYVGAART 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEA 102
           Q   V  G   VN +  + I+AE+A
Sbjct: 61  QYD-VKGGFADVNGE-GLTILAEQA 83


>gi|156619213|gb|ABU88285.1| ATP synthase CF1 epsilon subunit [Chlamydomonas moewusii]
          Length = 135

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 3/125 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           ++ T+ +  + F+  Q  +++ +P+ +G  G+L NH P +  L  G + V   E  +   
Sbjct: 3   LEITILTPQRPFWNGQ-AEEIILPTETGEMGVLKNHAPIITGLDVGAMLVRTKENWTS-- 59

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           +   G   +   ++V I+A EA   +S+D   A+     A++ L  A     K EA  A 
Sbjct: 60  YAIMGGFALVKQNNVTILANEAQASESIDPEEAKTAFELAKTNLEKAEGVKEKVEANFAY 119

Query: 141 EVAEA 145
           + A+A
Sbjct: 120 KRAKA 124


>gi|408375330|ref|ZP_11173001.1| ATP synthase subunit epsilon [Alcanivorax hongdengensis A-11-3]
 gi|407764776|gb|EKF73242.1| ATP synthase subunit epsilon [Alcanivorax hongdengensis A-11-3]
          Length = 141

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 1/83 (1%)

Query: 48  GAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDS 107
           G  GI+P H P L  LKPG + V +  G  +  +VS G + V     V ++A+ A   ++
Sbjct: 31  GDLGIMPGHTPLLTRLKPGPVRVRKQNGEEEIFYVSGGFLEVQ-PKLVTVLADTAERAEN 89

Query: 108 LDASAARDVLSKAQSELSSASSE 130
           +D + A     +A+  L   +SE
Sbjct: 90  MDEAEAERAKERAREALEGKNSE 112


>gi|343511651|ref|ZP_08748806.1| F0F1 ATP synthase subunit epsilon [Vibrio scophthalmi LMG 19158]
 gi|343515723|ref|ZP_08752773.1| F0F1 ATP synthase subunit epsilon [Vibrio sp. N418]
 gi|342797386|gb|EGU33036.1| F0F1 ATP synthase subunit epsilon [Vibrio scophthalmi LMG 19158]
 gi|342797679|gb|EGU33320.1| F0F1 ATP synthase subunit epsilon [Vibrio sp. N418]
          Length = 140

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 10/102 (9%)

Query: 48  GAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDS 107
           G  GI   H P L  +KPG++ +    G  + I+VS G I V   S+  ++A+ A   + 
Sbjct: 32  GELGIFHGHTPLLTAIKPGMVRIVLQNGHEEIIYVSGGMIEVQ-PSTATVLADTAIRGEE 90

Query: 108 LDASAARDVLSKAQS---------ELSSASSETAKAEAQIAV 140
           LDA+ A +   +A+          + + A+SE AKA AQ+ V
Sbjct: 91  LDAAKAEEAKRRAEENIQNQHGDMDFAQAASELAKAIAQLRV 132


>gi|93007150|ref|YP_581587.1| F0F1 ATP synthase subunit epsilon [Psychrobacter cryohalolentis K5]
 gi|119367764|sp|Q1Q8A0.1|ATPE_PSYCK RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|92394828|gb|ABE76103.1| ATP synthase F1 subcomplex epsilon subunit [Psychrobacter
           cryohalolentis K5]
          Length = 138

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 2/92 (2%)

Query: 48  GAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVDS 107
           G  G+LP H P + +LKPG + V   +G  + I+VS G + V     V ++A+ A    +
Sbjct: 30  GEIGVLPGHTPLITLLKPGAMRVQTPDGEEEVIYVSGGVLEVQ-PKMVTVLADTAMRAHN 88

Query: 108 LDASAARDVLSKAQSELSSASSETAKAEAQIA 139
           LD S   +   KA+  L +  S+T +  A +A
Sbjct: 89  LDESKIVEARKKAEQMLVN-QSDTVQTNAALA 119


>gi|188025438|ref|ZP_02958631.2| hypothetical protein PROSTU_00377 [Providencia stuartii ATCC 25827]
 gi|188023448|gb|EDU61488.1| ATP synthase F1, epsilon subunit [Providencia stuartii ATCC 25827]
          Length = 141

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 15/129 (11%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
            T+ S  K  +    V+++ V    G  GI P H P L  +KPG++ + +  G  + I++
Sbjct: 9   LTVVSAEKQMFEGL-VQKIQVTGSEGELGIYPQHTPLLTAIKPGMVRITKQFGEEELIYL 67

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSE-----------LSSASSET 131
           S G + V  +  + ++A+ A  +   D   AR + SK ++E            + AS+E 
Sbjct: 68  SGGILEVQPNGVI-VLADTA--IRGKDLDEARALESKRRAEEHVRKAHGDVDYAQASAEL 124

Query: 132 AKAEAQIAV 140
           AKA A++ V
Sbjct: 125 AKAIAKLRV 133


>gi|108773049|ref|YP_635959.1| ATP synthase CF1 epsilon subunit [Acutodesmus obliquus]
 gi|122244023|sp|Q1KVW5.1|ATPE_SCEOB RecName: Full=ATP synthase epsilon chain, chloroplastic; AltName:
           Full=ATP synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|88696615|gb|ABD48241.1| CF1 epsilon subunit of ATP synthase [Acutodesmus obliquus]
          Length = 136

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 3/125 (2%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           +  ++ +  K F+  Q  +++ +P+ +G  G+L NH P +  L  G + V   E  +   
Sbjct: 3   LQISILTPEKPFWNGQ-AEEIILPTETGEMGVLKNHAPIITGLDVGAMLVRTKEEWNS-- 59

Query: 81  FVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
           +   G   V   + V I+A EA   +++DA  A++    A+  L  A     K EA  A 
Sbjct: 60  YALMGGFAVVKKNKVTILANEAESAETIDAEEAKNAFEIAKGNLEKAEGVKQKVEANFAY 119

Query: 141 EVAEA 145
           + A+A
Sbjct: 120 KRAKA 124


>gi|372000163|gb|AEX65158.1| F0F1 ATP synthase epsilon chain [Mollugo verticillata]
          Length = 133

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/125 (23%), Positives = 62/125 (49%), Gaps = 5/125 (4%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITV-YETEGVSQK 79
           ++  + + N++ Y N  VK++ +P+ SG  G+LPNH P    +  G++ +  + + ++  
Sbjct: 3   VNLCVLTPNRIVY-NSEVKEIILPTNSGQIGVLPNHAPIATAVDIGILRIRLDDQWLTMA 61

Query: 80  IFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIA 139
           +    G      ++ + ++  EA     +D   A+  L KA++ L +A  +    EA +A
Sbjct: 62  LM---GGFARVGNNEITVLVNEAEKGSDIDPQEAQQTLEKAEANLRNAEGKRQIIEANLA 118

Query: 140 VEVAE 144
           +  A 
Sbjct: 119 LRRAR 123


>gi|357039220|ref|ZP_09101015.1| ATP synthase epsilon chain [Desulfotomaculum gibsoniae DSM 7213]
 gi|355358684|gb|EHG06450.1| ATP synthase epsilon chain [Desulfotomaculum gibsoniae DSM 7213]
          Length = 135

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 2/95 (2%)

Query: 36  QNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSV 95
           Q+++ V +P   G  G+LP H P ++ LK G+  V+  EG   KI VS G   + ++  V
Sbjct: 21  QDIRFVVLPGTEGELGVLPEHAPLVSALKTGLARVHH-EGKVLKIAVSGGFAEIRNN-KV 78

Query: 96  QIIAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
            ++A  A   D +D   A+    +A+  LS+   +
Sbjct: 79  TVLANAAEREDQIDVERAQAAKERAEQRLSAGGQD 113


>gi|381198500|ref|ZP_09905838.1| F0F1 ATP synthase subunit epsilon [Acinetobacter lwoffii WJ10621]
          Length = 139

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 1/84 (1%)

Query: 47  SGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVD 106
            G  GI+P H P + +LKPG I V    G  + I+VS G + V     V ++A+ A   +
Sbjct: 29  GGELGIMPGHTPLVTLLKPGTIRVLLENGTEELIYVSGGVLEVQ-PHVVTVLADTAVRAE 87

Query: 107 SLDASAARDVLSKAQSELSSASSE 130
           +LD +A  +    A+  L++  S+
Sbjct: 88  NLDEAAILEARKHAEQLLANQKSD 111


>gi|284046065|ref|YP_003396405.1| ATP synthase F1 subunit epsilon [Conexibacter woesei DSM 14684]
 gi|283950286|gb|ADB53030.1| ATP synthase F1, epsilon subunit [Conexibacter woesei DSM 14684]
          Length = 138

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 41/77 (53%)

Query: 35  NQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSS 94
           N  V+ +   +  G+ GIL NH P LA+L P  + +Y +EG   ++    G + V  D  
Sbjct: 19  NDQVEMIATKTVEGSIGILANHQPLLAMLDPAELRLYRSEGDVVRLAQGEGYLQVAGDGG 78

Query: 95  VQIIAEEAHPVDSLDAS 111
           V I+ ++A   + LD+S
Sbjct: 79  VLILVQDAIAPEQLDSS 95


>gi|307133302|ref|YP_003885318.1| F1 sector of membrane-bound ATP synthase subunit epsilon [Dickeya
           dadantii 3937]
 gi|306530831|gb|ADN00762.1| F1 sector of membrane-bound ATP synthase, epsilon subunit [Dickeya
           dadantii 3937]
          Length = 140

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 51/99 (51%), Gaps = 1/99 (1%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V+++ V    G  GI P H P L  +KPG++ + +  G  + I++S G + V  +  V +
Sbjct: 22  VQKIQVTGSEGELGIYPGHAPLLTAIKPGMVRIVKQHGEEEYIYLSGGILEVQPN-MVTV 80

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEA 136
           +++ A     LD + A +   KA+  + ++  +   A+A
Sbjct: 81  LSDTAIRGQDLDEARALEAKRKAEEHIRNSHGDVDYAQA 119


>gi|398332410|ref|ZP_10517115.1| F0F1 ATP synthase subunit epsilon [Leptospira alexanderi serovar
           Manhao 3 str. L 60]
          Length = 137

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 62/115 (53%), Gaps = 3/115 (2%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           A++++ ++ S  K+ Y  + V  + VP   G FGILPNH P +A L  G++ + + E + 
Sbjct: 3   ANKLNVSVISPEKILYKGE-VDSLVVPGSEGFFGILPNHAPLVATLGIGILEIRKGEKL- 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETA 132
           + + V  G I V ++ SV I+ +     + +D  A +  L++A+    S S  T+
Sbjct: 61  KVLSVEGGFIEVKEN-SVSILTDHGALKEDIDIEAEKKALAEAEKLSPSDSKNTS 114


>gi|405381038|ref|ZP_11034871.1| ATP synthase, F1 epsilon subunit [Rhizobium sp. CF142]
 gi|397322506|gb|EJJ26911.1| ATP synthase, F1 epsilon subunit [Rhizobium sp. CF142]
          Length = 135

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 2/120 (1%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           AD  +F L S  ++  + + V +V +P+  G   ++ NH PT+  +KPG+++V  + G  
Sbjct: 2   ADNFNFELVSPERLLLS-EMVTEVVIPATEGEMTVMANHAPTMTTIKPGIVSVRSSAGSK 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           Q   V  G   +   +   ++AE A PV  L+       +  A+ EL        K++ +
Sbjct: 61  QDYVVFGGFADIL-PTGCTLLAESAVPVQELNKDELTRRIEAAKMELEDVVHHEHKSKLE 119


>gi|220905451|ref|YP_002480763.1| ATP synthase F1 subunit epsilon [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869750|gb|ACL50085.1| ATP synthase F1, epsilon subunit [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 134

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 1/101 (0%)

Query: 43  VPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEA 102
            P   G FG+LP HV  L+ LK G +      G  + +F+S G   VN+D  + ++AE A
Sbjct: 25  CPGIEGEFGVLPKHVSLLSALKTGGLRYKTPGGKEEYVFISGGFADVNND-VLTVLAESA 83

Query: 103 HPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
                +D + A     +A+  ++  + +T    A+ A+  A
Sbjct: 84  ELAQDIDTARAMAAKERAEKRIADHAEQTDVTRAEAALHRA 124


>gi|406036456|ref|ZP_11043820.1| F0F1 ATP synthase subunit epsilon [Acinetobacter parvus DSM 16617 =
           CIP 108168]
          Length = 139

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)

Query: 47  SGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEAHPVD 106
            G  GILP H P + +L+PG I V    G  + ++VS G + V     V ++A+ A   D
Sbjct: 29  GGELGILPGHAPLVTLLQPGPIRVQLENGTEEIVYVSGGVLEVQ-PHVVTVLADSAIRAD 87

Query: 107 SLDASAARDVLSKAQSELSSASSE 130
           +LD +A  +   +A+  L++  S+
Sbjct: 88  NLDEAAIMEARKQAEQLLANQKSD 111


>gi|365857090|ref|ZP_09397089.1| ATP synthase F1, epsilon subunit [Acetobacteraceae bacterium
           AT-5844]
 gi|363716828|gb|EHM00222.1| ATP synthase F1, epsilon subunit [Acetobacteraceae bacterium
           AT-5844]
          Length = 136

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 2/116 (1%)

Query: 22  DFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIF 81
           D  L S  K+  + + V+   +P+  G  GIL  H P +  LK GVI V      ++++F
Sbjct: 5   DLELVSPEKLLLS-RPVEMAIIPAAEGDMGILAGHSPMIIALKGGVIEVRGGGHATERLF 63

Query: 82  VSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           V+ G   +     V ++A+EA P+  L  S A   +  A++    A  +T +A  Q
Sbjct: 64  VAGGFAEIT-PGRVTVLADEATPLAQLSRSEAEARVKDAEAAYEKAVDDTPEAREQ 118


>gi|386743434|ref|YP_006216613.1| membrane-bound ATP synthase, F1 sector subunit epsilon [Providencia
           stuartii MRSN 2154]
 gi|384480127|gb|AFH93922.1| membrane-bound ATP synthase, F1 sector subunit epsilon [Providencia
           stuartii MRSN 2154]
          Length = 137

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 15/129 (11%)

Query: 23  FTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFV 82
            T+ S  K  +    V+++ V    G  GI P H P L  +KPG++ + +  G  + I++
Sbjct: 5   LTVVSAEKQMFEGL-VQKIQVTGSEGELGIYPQHTPLLTAIKPGMVRITKQFGEEELIYL 63

Query: 83  SSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSE-----------LSSASSET 131
           S G + V  +  + ++A+ A  +   D   AR + SK ++E            + AS+E 
Sbjct: 64  SGGILEVQPNGVI-VLADTA--IRGKDLDEARALESKRRAEEHVRKAHGDVDYAQASAEL 120

Query: 132 AKAEAQIAV 140
           AKA A++ V
Sbjct: 121 AKAIAKLRV 129


>gi|94986848|ref|YP_594781.1| F0F1 ATP synthase subunit epsilon [Lawsonia intracellularis
           PHE/MN1-00]
 gi|442555679|ref|YP_007365504.1| F0F1 ATP synthase subunit epsilon [Lawsonia intracellularis N343]
 gi|119367742|sp|Q1MRB7.1|ATPE_LAWIP RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|94731097|emb|CAJ54459.1| ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit)
           [Lawsonia intracellularis PHE/MN1-00]
 gi|441493126|gb|AGC49820.1| F0F1 ATP synthase subunit epsilon [Lawsonia intracellularis N343]
          Length = 133

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 2/106 (1%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           V  V++P  +G  GILP H+P +A L  G +  Y+ +  +  +F+S+G   V+++  V +
Sbjct: 21  VTYVNLPGVNGELGILPGHIPLMAALDIGKLH-YQQDSKNYYVFISAGFAEVSNN-KVTV 78

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAVEVA 143
           + E A     +D + A+    +A++ L  A  +   A A+ A+  A
Sbjct: 79  LTEAAEKASEIDVARAQAAKERAKARLLKAEEDIDMARAEAAMHRA 124


>gi|408529242|emb|CCK27416.1| ATP synthase epsilon chain [Streptomyces davawensis JCM 4913]
          Length = 124

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 3/114 (2%)

Query: 17  YADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGV 76
            A ++   L + ++  ++ Q    V   + SG  G++P H P L +L+ G +T+  +EG 
Sbjct: 1   MAAELHVALVAADREVWSGQATLVV-ARTTSGDIGVMPGHQPLLGVLESGPVTIRTSEGA 59

Query: 77  SQKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSE 130
           +    V  G I+  D+  + ++AE A   D +D   A   L +A+SE + AS+E
Sbjct: 60  TVVAAVHGGFISFADN-KLSLLAEIAELSDEIDVQRAERALERAKSE-ADASAE 111


>gi|408501691|ref|YP_006865610.1| ATP synthase, Delta/Epsilon chain, beta-sandwich domain protein
          [Bifidobacterium asteroides PRL2011]
 gi|408466515|gb|AFU72044.1| ATP synthase, Delta/Epsilon chain, beta-sandwich domain protein
          [Bifidobacterium asteroides PRL2011]
          Length = 98

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 21 MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
          M   + S ++  ++ Q  + V VP   G+ GI+P+H P LA+L+ G I V  T+G  Q  
Sbjct: 9  MQVNIVSADRPIWSGQ-ARSVTVPGTQGSMGIMPDHEPVLALLQEGNIRVQATDGGRQSF 67

Query: 81 FVSSG 85
           V SG
Sbjct: 68 HVDSG 72


>gi|269219865|ref|ZP_06163719.1| ATP synthase, Delta/Epsilon chain, beta-sandwich domain protein
          [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269210770|gb|EEZ77110.1| ATP synthase, Delta/Epsilon chain, beta-sandwich domain protein
          [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 86

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 34/56 (60%)

Query: 43 VPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQII 98
          VPS  GA GILP H P +A+L PG + V  +EG S    V  G +TV++D +  ++
Sbjct: 22 VPSQEGAMGILPGHTPLMALLVPGRVEVNLSEGRSLVFEVDGGFVTVDEDRAYVVV 77


>gi|108796902|ref|YP_636200.1| ATP synthase CF1 epsilon subunit [Pseudendoclonium akinetum]
 gi|122227093|sp|Q3ZJ67.1|ATPE_PSEAK RecName: Full=ATP synthase epsilon chain, chloroplastic; AltName:
           Full=ATP synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|56159600|gb|AAV80624.1| CF1 epsilon subunit of ATP synthase [Pseudendoclonium akinetum]
          Length = 130

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 66/134 (49%), Gaps = 9/134 (6%)

Query: 21  MDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKI 80
           +   + + ++VF+ NQ  +++ +P+ +G  G+L NH P +  L  G++++      +QK 
Sbjct: 3   LQICILTPDRVFW-NQEAEEIILPTNTGQMGVLTNHAPIITALDIGIMSIR-----TQKD 56

Query: 81  FVS---SGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           + S    G   +   + V ++   A   +++++S A     +A+ +L  A  +  K EA 
Sbjct: 57  WTSVALMGGFALVKQNQVTVLVNSAESKETINSSEAEQAFLEAKEQLEKALGQKEKVEAN 116

Query: 138 IAVEVAEALKIFVS 151
            A + A A    VS
Sbjct: 117 FAFKRARARYQLVS 130


>gi|397661171|ref|YP_006501871.1| ATP synthase subunit epsilon [Taylorella equigenitalis ATCC 35865]
 gi|394349350|gb|AFN35264.1| ATP synthase epsilon chain [Taylorella equigenitalis ATCC 35865]
          Length = 142

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 48/89 (53%), Gaps = 1/89 (1%)

Query: 41  VDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAE 100
           V +P  +G  G+LP H P ++ +KPG + +   +G  + +FV+ G + V    +V ++A+
Sbjct: 25  VVLPGVTGEIGVLPGHTPLISRIKPGRVKITREDGSEETLFVAGGLLEVQ-PFAVTVLAD 83

Query: 101 EAHPVDSLDASAARDVLSKAQSELSSASS 129
               ++ LD   A +   +A+    +A+S
Sbjct: 84  TVVRMEDLDEQKALEARKRAEESRKNATS 112


>gi|165977081|ref|YP_001652674.1| F0F1 ATP synthase subunit epsilon [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|190150976|ref|YP_001969501.1| ATP synthase subunit epsilion [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|303249888|ref|ZP_07336090.1| F0F1 ATP synthase subunit epsilon [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|303252036|ref|ZP_07338206.1| F0F1 ATP synthase subunit epsilon [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307248694|ref|ZP_07530707.1| ATP synthase epsilon chain [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
 gi|307253312|ref|ZP_07535184.1| ATP synthase epsilon chain [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|307264333|ref|ZP_07545921.1| ATP synthase epsilon chain [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|226740217|sp|B3H2P2.1|ATPE_ACTP7 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|226740218|sp|B0BRX1.1|ATPE_ACTPJ RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|165877182|gb|ABY70230.1| ATP synthase epsilon chain [Actinobacillus pleuropneumoniae serovar
           3 str. JL03]
 gi|189916107|gb|ACE62359.1| ATP synthase epsilon chain [Actinobacillus pleuropneumoniae serovar
           7 str. AP76]
 gi|302649100|gb|EFL79286.1| F0F1 ATP synthase subunit epsilon [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|302650951|gb|EFL81105.1| F0F1 ATP synthase subunit epsilon [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306854621|gb|EFM86811.1| ATP synthase epsilon chain [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
 gi|306859176|gb|EFM91217.1| ATP synthase epsilon chain [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|306870285|gb|EFN02041.1| ATP synthase epsilon chain [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
          Length = 139

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 5/132 (3%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           A Q + ++ S  K  + N NV  V V    G  G+   H P L  +KPG++     +G  
Sbjct: 2   ASQFELSVVSAEKEIF-NGNVVSVRVTGIDGELGVYAGHTPLLTSIKPGMVKYTLEDGKE 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           + I+VS G + V   + V ++A+ A   + LD    R + +K ++E + + S  A+  A+
Sbjct: 61  EFIYVSGGFLEV-QPTIVTVLADVAIRGEELDQQ--RILAAKRKAEDTLSKSNNAELSAK 117

Query: 138 IAVEVAEALKIF 149
           ++ E+A+ L+++
Sbjct: 118 LSREIAK-LRVY 128


>gi|319761167|ref|YP_004125104.1| ATP synthase F1 subunit epsilon [Alicycliphilus denitrificans BC]
 gi|330823025|ref|YP_004386328.1| ATP synthase F1 subunit epsilon [Alicycliphilus denitrificans K601]
 gi|317115728|gb|ADU98216.1| ATP synthase F1, epsilon subunit [Alicycliphilus denitrificans BC]
 gi|329308397|gb|AEB82812.1| ATP synthase F1, epsilon subunit [Alicycliphilus denitrificans
           K601]
          Length = 138

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 3/106 (2%)

Query: 41  VDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAE 100
           V +P  +G  GILP H P +  +KPG + +   +G  + +FV+ G + V  D  V ++++
Sbjct: 23  VALPGEAGELGILPKHTPLITRIKPGSVRIEMADGSEEFVFVAGGILEVQPD-CVTVLSD 81

Query: 101 EAHPVDSLDASAARDVLSKAQSELSSASSE--TAKAEAQIAVEVAE 144
            A     LD   A++  + A+  L +A SE   A+A++++A+  A+
Sbjct: 82  TAIRGKDLDDQKAQEARAAAEEALKNAKSEIDIARAQSELAIMAAQ 127


>gi|48474556|sp|Q8VV76.1|ATPE_COLMA RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|18146852|dbj|BAB82485.1| F0F1-ATPase subunit epsilon [Colwellia maris]
          Length = 140

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 1/89 (1%)

Query: 38  VKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQI 97
           +K + +    G  GI+P H P L  LKPG+  + + +G  + I++S G + V  + +V +
Sbjct: 22  IKSLQITGSEGELGIMPGHAPLLTSLKPGMALITKKDGSEEVIYLSGGMLEVQPN-NVTV 80

Query: 98  IAEEAHPVDSLDASAARDVLSKAQSELSS 126
           +A+ A     LD  AA +   +A+  +++
Sbjct: 81  LADIATRAADLDEQAALEAKQRAEENMNA 109


>gi|389584011|dbj|GAB66745.1| hypothetical protein PCYB_095290 [Plasmodium cynomolgi strain B]
          Length = 142

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 6/102 (5%)

Query: 24  TLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVS 83
           T++S ++  + NQ +K+   P   G F I  NH P + +L+ G+ITV   E   ++ F+S
Sbjct: 21  TISSSSESIFRNQVIKRASFPGIEGYFTITNNHSPLVTLLRNGIITVEFDEKEKKQFFIS 80

Query: 84  SGTITVNDDSSV------QIIAEEAHPVDSLDASAARDVLSK 119
            G       +        +I+  E  P++ LD +    VL +
Sbjct: 81  DGIFIYKKSNDNNNSNNAEIVGVEIVPLEYLDKNKTVKVLQQ 122


>gi|431795314|ref|YP_007222219.1| ATP synthase F1 subunit epsilon [Desulfitobacterium
           dichloroeliminans LMG P-21439]
 gi|430785540|gb|AGA70823.1| ATP synthase, F1 epsilon subunit [Desulfitobacterium
           dichloroeliminans LMG P-21439]
          Length = 133

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 2/98 (2%)

Query: 43  VPSFSGAFGILPNHVPTLAILKPGVITVYETEGVSQKIFVSSGTITVNDDSSVQIIAEEA 102
           +P  +G  GILPNH P +  L  GVI  Y      +KI  S G + V+D+  V ++A+ A
Sbjct: 26  LPGETGEVGILPNHAPLITALGIGVIR-YTVNSKVEKIATSGGFVEVSDN-KVTVLADTA 83

Query: 103 HPVDSLDASAARDVLSKAQSELSSASSETAKAEAQIAV 140
            P D +D   A     +A++ L+  +       A++A+
Sbjct: 84  EPGDKIDLERAIAAKERAETRLAHRTDGIDSRRAELAL 121


>gi|307246570|ref|ZP_07528641.1| ATP synthase epsilon chain [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|307255555|ref|ZP_07537360.1| ATP synthase epsilon chain [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|307257727|ref|ZP_07539484.1| ATP synthase epsilon chain [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|307260006|ref|ZP_07541718.1| ATP synthase epsilon chain [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|306852442|gb|EFM84676.1| ATP synthase epsilon chain [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|306861404|gb|EFM93393.1| ATP synthase epsilon chain [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|306863633|gb|EFM95559.1| ATP synthase epsilon chain [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|306865842|gb|EFM97718.1| ATP synthase epsilon chain [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
          Length = 139

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 5/132 (3%)

Query: 18  ADQMDFTLASGNKVFYTNQNVKQVDVPSFSGAFGILPNHVPTLAILKPGVITVYETEGVS 77
           A Q + ++ S  K  + N NV  V V    G  G+   H P L  +KPG++     +G  
Sbjct: 2   ASQFELSVVSAEKEIF-NGNVVSVRVSGIDGELGVYAGHTPLLTSIKPGMVKYTLEDGKE 60

Query: 78  QKIFVSSGTITVNDDSSVQIIAEEAHPVDSLDASAARDVLSKAQSELSSASSETAKAEAQ 137
           + I+VS G + V   + V ++A+ A   + LD    R + +K ++E + + S  A+  A+
Sbjct: 61  EFIYVSGGFLEV-QPTIVTVLADVAIRGEELDQQ--RILAAKRKAEDTLSKSNNAELSAK 117

Query: 138 IAVEVAEALKIF 149
           ++ E+A+ L+++
Sbjct: 118 LSREIAK-LRVY 128


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.308    0.120    0.301 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,493,074,470
Number of Sequences: 23463169
Number of extensions: 87371986
Number of successful extensions: 383499
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1724
Number of HSP's successfully gapped in prelim test: 3715
Number of HSP's that attempted gapping in prelim test: 372454
Number of HSP's gapped (non-prelim): 12242
length of query: 219
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 82
effective length of database: 9,144,741,214
effective search space: 749868779548
effective search space used: 749868779548
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 74 (33.1 bits)