BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9931
(237 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6DRC5|USPL1_DANRE SUMO-specific isopeptidase USPL1 OS=Danio rerio GN=uspl1 PE=1 SV=1
Length = 1014
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/148 (18%), Positives = 57/148 (38%)
Query: 9 SFCCVKLSPTSFCCVKLRPTSFCCVKLHPTSFCCVKLRPTSFCCVKLRPTSFCCVKLRPT 68
S + P S +K +P S + P S + +P S + +P ++++P
Sbjct: 150 SLDKTEEQPVSIEDIKEQPISHDATEGQPISIDQTEEQPVSILHTEEQPIVLDLIEVKPM 209
Query: 69 SFCCVKLCPTSFCCVKLSPTSFCYVKLSPTSFCCVKLRPTSFCWVKLSPTSFCYVKLRPT 128
S + P K P S + + +++P S + PTSF +++ +P
Sbjct: 210 SVDHSEEQPICIDNTKERPVSIVHTEEQSIVLDLFEVKPMSIAHTEEKPTSFDHIEEKPM 269
Query: 129 SFCCVKLRPTSFCCVKLRIKCADYVVDK 156
S + +P S + + D ++
Sbjct: 270 SIAHTEEKPVSLVHTEDQHLSIDQTEEQ 297
>sp|P13730|SGS3_DROER Salivary glue protein Sgs-3 OS=Drosophila erecta GN=Sgs3 PE=2 SV=3
Length = 333
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 29/79 (36%), Gaps = 3/79 (3%)
Query: 67 PTSFCCVKLCPTSFCCVKLSPTSFCYVKLSPTSFCCVKLRPTSFCWVKLSPTSFCYVKLR 126
PT K PT K +PT K +PT K PT K +PT K
Sbjct: 207 PTKRATTKRAPTKRATTKRAPTKRATTKRAPTKRATTKRAPTKRATTKRAPTKRATTKRA 266
Query: 127 PTSFCCVK---LRPTSFCC 142
PT K RPTS C
Sbjct: 267 PTKRATTKRATARPTSKPC 285
Score = 38.9 bits (89), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 24/68 (35%)
Query: 77 PTSFCCVKLSPTSFCYVKLSPTSFCCVKLRPTSFCWVKLSPTSFCYVKLRPTSFCCVKLR 136
PT K +PT K +PT K PT K +PT K PT K
Sbjct: 207 PTKRATTKRAPTKRATTKRAPTKRATTKRAPTKRATTKRAPTKRATTKRAPTKRATTKRA 266
Query: 137 PTSFCCVK 144
PT K
Sbjct: 267 PTKRATTK 274
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 25/76 (32%), Gaps = 3/76 (3%)
Query: 17 PTSFCCVKLRPTSFCCVKLHPTSFCCVKLRPTSFCCVKLRPTSFCCVKLRPTSFCCVKLC 76
PT K PT K PT K PT K PT K PT K
Sbjct: 207 PTKRATTKRAPTKRATTKRAPTKRATTKRAPTKRATTKRAPTKRATTKRAPTKRATTKRA 266
Query: 77 PTSFCCVKLS---PTS 89
PT K + PTS
Sbjct: 267 PTKRATTKRATARPTS 282
>sp|Q6ZQT0|YD023_HUMAN Putative uncharacterized protein FLJ45035 OS=Homo sapiens PE=5 SV=1
Length = 140
Score = 34.7 bits (78), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 51/113 (45%)
Query: 27 PTSFCCVKLHPTSFCCVKLRPTSFCCVKLRPTSFCCVKLRPTSFCCVKLCPTSFCCVKLS 86
P S +L P S +L P S +L P S +L P S +LCP S +LS
Sbjct: 7 PVSETFGRLCPVSETFARLCPVSETFARLCPVSETFARLCPVSETFGRLCPVSEMFGRLS 66
Query: 87 PTSFCYVKLSPTSFCCVKLRPTSFCWVKLSPTSFCYVKLRPTSFCCVKLRPTS 139
P S + +L P S +L P S + +L P S + +L P S +L P S
Sbjct: 67 PVSETFGRLCPVSETFGRLCPVSEMFARLCPVSETFGRLSPVSEMFGRLCPVS 119
Score = 34.7 bits (78), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 52/116 (44%)
Query: 14 KLSPTSFCCVKLRPTSFCCVKLHPTSFCCVKLRPTSFCCVKLRPTSFCCVKLRPTSFCCV 73
+L P S +L P S +L P S +L P S +L P S +L P S
Sbjct: 14 RLCPVSETFARLCPVSETFARLCPVSETFARLCPVSETFGRLCPVSEMFGRLSPVSETFG 73
Query: 74 KLCPTSFCCVKLSPTSFCYVKLSPTSFCCVKLRPTSFCWVKLSPTSFCYVKLRPTS 129
+LCP S +L P S + +L P S +L P S + +L P S + +L P S
Sbjct: 74 RLCPVSETFGRLCPVSEMFARLCPVSETFGRLSPVSEMFGRLCPVSEMFGRLCPVS 129
Score = 30.8 bits (68), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 56/127 (44%)
Query: 13 VKLSPTSFCCVKLRPTSFCCVKLHPTSFCCVKLRPTSFCCVKLRPTSFCCVKLRPTSFCC 72
+L P S +L P S +L P S +L P S +L P S +L P S
Sbjct: 3 ARLCPVSETFGRLCPVSETFARLCPVSETFARLCPVSETFARLCPVSETFGRLCPVSEMF 62
Query: 73 VKLCPTSFCCVKLSPTSFCYVKLSPTSFCCVKLRPTSFCWVKLSPTSFCYVKLRPTSFCC 132
+L P S +L P S + +L P S +L P S + +LSP S + +L P S
Sbjct: 63 GRLSPVSETFGRLCPVSETFGRLCPVSEMFARLCPVSETFGRLSPVSEMFGRLCPVSEMF 122
Query: 133 VKLRPTS 139
+L P S
Sbjct: 123 GRLCPVS 129
>sp|P54643|SP87_DICDI Spore coat protein SP87 OS=Dictyostelium discoideum GN=pspD PE=2
SV=1
Length = 677
Score = 32.0 bits (71), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 42/120 (35%), Gaps = 3/120 (2%)
Query: 27 PTSFCCVKLHPTSFCCVKLRPTSFCCVKLRPTSFCCVKLRPTSFCCVKLCPTSFCCVKLS 86
P C V H C V RP C ++ P C V CCVK+ C ++
Sbjct: 520 PGHECKVDQHGKECCVVAHRPPPKCSLRCPPRHECRVNHF-GEECCVKV-HHDKCSLRCP 577
Query: 87 PTSFCYVKLSPTSFCCVKLRPTSFCWVKLSPTSFCYVKLRPTSFCCVKLRPTSFCCVKLR 146
P C V C V RP C ++ P C + CCVK R C L
Sbjct: 578 PGHECKVDQHGKECCVVAHRPPPKCSLRCPPKHECRINHF-GEECCVKSRNDCLTCEDLN 636
>sp|Q5UPU7|YL264_MIMIV Uncharacterized WD repeat-containing protein L264 OS=Acanthamoeba
polyphaga mimivirus GN=MIMI_L264 PE=1 SV=1
Length = 1389
Score = 31.6 bits (70), Expect = 4.4, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 47/120 (39%), Gaps = 15/120 (12%)
Query: 21 CCVKLRPTSFCCVKLHPTSFCCVKLRPTSFCCVKLRPTSFCCVKLRPTSFCCVKLCPTSF 80
C +K+ P C K P F +K CC + CC S C CP +
Sbjct: 388 CPIKIDPNEEC--KQVPNEFIQIKCCQEQICC-----QNSCCAN--KNSCCTDNCCPKTK 438
Query: 81 CCVKLSPTSFCYVKLSPTSFCCVKLRPTSFCWVKLS-PTSFCYVKLRPTSFCCVKLRPTS 139
CC K S+ ++ + CC + +C S T++C T +C + ++P S
Sbjct: 439 CCEKDDTNSYT-IEWQKSPDCC---KEIDYCEKPFSCETNYCGNSYE-TDYCPIYIKPDS 493
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.336 0.140 0.526
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,437,547
Number of Sequences: 539616
Number of extensions: 3303268
Number of successful extensions: 8840
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 6520
Number of HSP's gapped (non-prelim): 641
length of query: 237
length of database: 191,569,459
effective HSP length: 114
effective length of query: 123
effective length of database: 130,053,235
effective search space: 15996547905
effective search space used: 15996547905
T: 11
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.7 bits)
S2: 59 (27.3 bits)