Query psy9931
Match_columns 237
No_of_seqs 4 out of 6
Neff 1.6
Searched_HMMs 13730
Date Fri Aug 16 23:19:10 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9931.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/9931hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d4cpai_ g.3.2.1 (I:) Carboxype 4.3 1.1E+02 0.0082 18.6 0.6 10 161-170 6-15 (37)
2 d1vhta_ c.37.1.1 (A:) Dephosph 4.0 80 0.0058 22.0 -0.3 13 146-158 166-178 (208)
3 d1k4na_ d.32.1.5 (A:) Hypothet 3.7 1.5E+02 0.011 23.0 1.0 8 171-178 173-180 (190)
4 d1wila_ g.50.1.3 (A:) Hypothet 2.9 89 0.0064 22.1 -1.0 15 47-61 17-35 (89)
5 d1t2ya_ g.46.1.1 (A:) Metallot 2.9 2.2E+02 0.016 16.0 0.9 16 156-171 7-22 (26)
6 d1x62a2 g.39.1.3 (A:8-42) PDZ 2.8 1.6E+02 0.012 17.8 0.2 9 34-42 7-15 (35)
7 d1deka_ c.37.1.1 (A:) Deoxynuc 2.3 1.9E+02 0.014 19.7 0.2 14 145-158 212-225 (241)
8 d1uf9a_ c.37.1.1 (A:) Dephosph 2.0 1.7E+02 0.012 19.3 -0.6 12 146-157 161-172 (191)
9 d1jjva_ c.37.1.1 (A:) Dephosph 1.9 3.6E+02 0.026 18.2 1.2 13 146-158 165-177 (205)
10 d1x5wa1 g.37.1.1 (A:8-35) Zinc 1.9 68 0.0049 18.7 -2.4 9 143-151 20-28 (28)
No 1
>d4cpai_ g.3.2.1 (I:) Carboxypeptidase A inhibitor {Potato [TaxId: 4113]}
Probab=4.32 E-value=1.1e+02 Score=18.58 Aligned_cols=10 Identities=50% Similarity=1.069 Sum_probs=7.2
Q ss_pred ccCCCCCcce
Q psy9931 161 SCDKPCSTSF 170 (237)
Q Consensus 161 ~~~~~~~~~~ 170 (237)
-|.|||+|..
T Consensus 6 ic~kpc~t~d 15 (37)
T d4cpai_ 6 ICNKPCKTHD 15 (37)
T ss_dssp TTTCBCSSSS
T ss_pred ccCCCccccc
Confidence 3788888754
No 2
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=4.04 E-value=80 Score=22.00 Aligned_cols=13 Identities=38% Similarity=0.634 Sum_probs=9.7
Q ss_pred EeeeeceeeecCC
Q psy9931 146 RIKCADYVVDKSS 158 (237)
Q Consensus 146 ~~~~~~~~~~~~~ 158 (237)
+++-||||+|.++
T Consensus 166 k~~~aD~vI~N~~ 178 (208)
T d1vhta_ 166 RLAVADDVIDNNG 178 (208)
T ss_dssp HHHHCSEEEECSS
T ss_pred HHHhCCEEEECCC
Confidence 4667899888765
No 3
>d1k4na_ d.32.1.5 (A:) Hypothetical protein YecM (EC4020) {Escherichia coli [TaxId: 562]}
Probab=3.67 E-value=1.5e+02 Score=22.96 Aligned_cols=8 Identities=50% Similarity=0.754 Sum_probs=6.1
Q ss_pred eEeEeeee
Q psy9931 171 CCIKVHPI 178 (237)
Q Consensus 171 ~~~~~~~~ 178 (237)
-|||+||.
T Consensus 173 i~IK~HP~ 180 (190)
T d1k4na_ 173 TTIKFHPW 180 (190)
T ss_dssp CEEEEESS
T ss_pred EEEEEcCc
Confidence 37999985
No 4
>d1wila_ g.50.1.3 (A:) Hypothetical protein KIAA1045 {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.92 E-value=89 Score=22.14 Aligned_cols=15 Identities=33% Similarity=0.645 Sum_probs=7.3
Q ss_pred eceeeEE----eeeeccee
Q psy9931 47 PTSFCCV----KLRPTSFC 61 (237)
Q Consensus 47 ~cs~Csv----kl~~cs~C 61 (237)
+|.+|.| .+.||+.|
T Consensus 17 mC~vC~v~t~~~l~pCRvC 35 (89)
T d1wila_ 17 MCDVCEVWTAESLFPCRVC 35 (89)
T ss_dssp CCTTTCCCCSSCCSSCSSS
T ss_pred cccccCcccccceecceee
Confidence 4444544 44455554
No 5
>d1t2ya_ g.46.1.1 (A:) Metallothionein {Neurospora crassa [TaxId: 5141]}
Probab=2.86 E-value=2.2e+02 Score=16.05 Aligned_cols=16 Identities=44% Similarity=1.014 Sum_probs=12.1
Q ss_pred cCCccccCCCCCccee
Q psy9931 156 KSSECSCDKPCSTSFC 171 (237)
Q Consensus 156 ~~~~~~~~~~~~~~~~ 171 (237)
..|.|.|...||-|.|
T Consensus 7 gasscncgsgcscsnc 22 (26)
T d1t2ya_ 7 GASSCNCGSGCSCSNC 22 (26)
T ss_dssp STTTCCCSSSCCSSTT
T ss_pred ccccccCCCCcccccc
Confidence 4577888888887765
No 6
>d1x62a2 g.39.1.3 (A:8-42) PDZ and LIM domain protein 1 Elfin {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.79 E-value=1.6e+02 Score=17.76 Aligned_cols=9 Identities=33% Similarity=0.368 Sum_probs=6.9
Q ss_pred Eecccceee
Q psy9931 34 KLHPTSFCC 42 (237)
Q Consensus 34 kL~~cs~C~ 42 (237)
||+.|..|+
T Consensus 7 klp~CdkCg 15 (35)
T d1x62a2 7 KLPMCDKCG 15 (35)
T ss_dssp CCCCCSSSC
T ss_pred cCccccccC
Confidence 677777777
No 7
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=2.34 E-value=1.9e+02 Score=19.66 Aligned_cols=14 Identities=29% Similarity=0.477 Sum_probs=9.8
Q ss_pred eEeeeeceeeecCC
Q psy9931 145 LRIKCADYVVDKSS 158 (237)
Q Consensus 145 L~~~~~~~~~~~~~ 158 (237)
+.++-||||+|.++
T Consensus 212 ~~~~~aD~vI~N~g 225 (241)
T d1deka_ 212 LPIRDGDLVITNDG 225 (241)
T ss_dssp CCCCTTCEEEECCS
T ss_pred hccCCCCEEEECCC
Confidence 34566899998754
No 8
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=2.01 E-value=1.7e+02 Score=19.33 Aligned_cols=12 Identities=25% Similarity=0.501 Sum_probs=8.0
Q ss_pred EeeeeceeeecC
Q psy9931 146 RIKCADYVVDKS 157 (237)
Q Consensus 146 ~~~~~~~~~~~~ 157 (237)
+++-||||+|.+
T Consensus 161 ~~~~aD~vI~N~ 172 (191)
T d1uf9a_ 161 KRKRATWVLENT 172 (191)
T ss_dssp HHHHCSEEECCS
T ss_pred HHHhCCEEEECC
Confidence 456678887754
No 9
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=1.93 E-value=3.6e+02 Score=18.21 Aligned_cols=13 Identities=38% Similarity=0.644 Sum_probs=9.1
Q ss_pred EeeeeceeeecCC
Q psy9931 146 RIKCADYVVDKSS 158 (237)
Q Consensus 146 ~~~~~~~~~~~~~ 158 (237)
+++-||||+|.++
T Consensus 165 k~~~aD~vI~N~~ 177 (205)
T d1jjva_ 165 RLKWADDVINNDA 177 (205)
T ss_dssp HHHHCSEEEECCS
T ss_pred HHHhCCEEEECCC
Confidence 4566888888654
No 10
>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}
Probab=1.93 E-value=68 Score=18.70 Aligned_cols=9 Identities=44% Similarity=0.999 Sum_probs=0.0
Q ss_pred EEeEeeeec
Q psy9931 143 VKLRIKCAD 151 (237)
Q Consensus 143 VhL~~~~~~ 151 (237)
||.||.|.|
T Consensus 20 vh~rihc~d 28 (28)
T d1x5wa1 20 IHERIHCTD 28 (28)
T ss_dssp HHHGGGCCS
T ss_pred HhhccccCC
Done!