Query psy9933
Match_columns 208
No_of_seqs 110 out of 1120
Neff 7.4
Searched_HMMs 29240
Date Fri Aug 16 23:21:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9933.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9933hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hhp_A Malate dehydrogenase; M 100.0 7.7E-50 2.6E-54 347.2 24.5 200 1-206 85-311 (312)
2 4aj2_A L-lactate dehydrogenase 100.0 2.3E-48 7.7E-53 340.3 16.2 191 1-202 103-329 (331)
3 3nep_X Malate dehydrogenase; h 100.0 9.1E-48 3.1E-52 334.4 17.7 196 1-206 85-309 (314)
4 1mld_A Malate dehydrogenase; o 100.0 1.1E-46 3.9E-51 327.4 24.4 203 1-207 84-312 (314)
5 2x0j_A Malate dehydrogenase; o 100.0 1E-47 3.5E-52 331.2 17.3 184 1-200 85-291 (294)
6 3tl2_A Malate dehydrogenase; c 100.0 2E-47 6.8E-52 332.5 18.4 190 1-200 94-313 (315)
7 1oju_A MDH, malate dehydrogena 100.0 4.4E-47 1.5E-51 327.4 19.7 184 1-200 85-291 (294)
8 3pqe_A L-LDH, L-lactate dehydr 100.0 2.2E-47 7.7E-52 333.5 16.7 191 1-201 89-313 (326)
9 3vku_A L-LDH, L-lactate dehydr 100.0 4.6E-48 1.6E-52 337.8 12.3 193 1-203 92-318 (326)
10 3p7m_A Malate dehydrogenase; p 100.0 6.2E-47 2.1E-51 330.1 19.0 195 1-206 89-320 (321)
11 3gvi_A Malate dehydrogenase; N 100.0 1.3E-46 4.4E-51 328.4 17.0 193 1-203 91-318 (324)
12 3fi9_A Malate dehydrogenase; s 100.0 2.1E-45 7E-50 323.0 17.2 193 1-203 92-319 (343)
13 1smk_A Malate dehydrogenase, g 100.0 2.5E-44 8.7E-49 314.0 23.8 201 1-206 92-319 (326)
14 1ez4_A Lactate dehydrogenase; 100.0 4E-44 1.4E-48 312.0 19.2 195 1-206 88-316 (318)
15 2zqz_A L-LDH, L-lactate dehydr 100.0 5E-44 1.7E-48 312.3 19.3 195 1-206 92-321 (326)
16 7mdh_A Protein (malate dehydro 100.0 4.7E-44 1.6E-48 316.8 18.9 195 1-206 124-357 (375)
17 2d4a_B Malate dehydrogenase; a 100.0 1.1E-43 3.7E-48 308.0 18.5 196 1-206 83-307 (308)
18 3ldh_A Lactate dehydrogenase; 100.0 1.8E-45 6E-50 321.5 7.2 180 1-200 105-327 (330)
19 2xxj_A L-LDH, L-lactate dehydr 100.0 2.7E-43 9.3E-48 305.7 18.6 191 1-201 83-308 (310)
20 1o6z_A MDH, malate dehydrogena 100.0 1.5E-42 5.3E-47 299.9 21.8 191 1-201 86-302 (303)
21 3d0o_A L-LDH 1, L-lactate dehy 100.0 7.9E-43 2.7E-47 303.5 18.3 191 1-202 90-314 (317)
22 1y6j_A L-lactate dehydrogenase 100.0 3.1E-42 1.1E-46 300.0 20.5 192 1-202 90-316 (318)
23 2i6t_A Ubiquitin-conjugating e 100.0 3.3E-42 1.1E-46 298.2 17.9 186 1-201 92-301 (303)
24 5mdh_A Malate dehydrogenase; o 100.0 6.3E-42 2.2E-46 299.8 18.7 197 1-207 95-332 (333)
25 1ur5_A Malate dehydrogenase; o 100.0 4.9E-42 1.7E-46 297.5 17.3 192 1-202 86-307 (309)
26 1ldn_A L-lactate dehydrogenase 100.0 1.2E-41 4E-46 296.0 17.6 191 1-201 90-314 (316)
27 4h7p_A Malate dehydrogenase; s 100.0 9.7E-42 3.3E-46 299.7 17.0 192 1-200 116-342 (345)
28 1hye_A L-lactate/malate dehydr 100.0 6.2E-41 2.1E-45 291.0 16.5 191 1-202 90-311 (313)
29 2hjr_A Malate dehydrogenase; m 100.0 3E-40 1E-44 288.5 19.1 192 1-202 98-324 (328)
30 1pzg_A LDH, lactate dehydrogen 100.0 4.7E-40 1.6E-44 287.6 20.0 191 2-202 100-325 (331)
31 1guz_A Malate dehydrogenase; o 100.0 4.3E-40 1.5E-44 285.2 18.7 193 1-203 85-307 (310)
32 1t2d_A LDH-P, L-lactate dehydr 100.0 4.3E-40 1.5E-44 286.9 18.2 189 3-201 95-316 (322)
33 2v6b_A L-LDH, L-lactate dehydr 100.0 2E-39 7E-44 280.4 16.9 189 1-201 83-302 (304)
34 1a5z_A L-lactate dehydrogenase 100.0 1.5E-38 5.2E-43 276.5 21.7 192 1-202 83-308 (319)
35 1b8p_A Protein (malate dehydro 100.0 1.6E-37 5.4E-42 271.2 19.0 194 1-205 99-328 (329)
36 1hyh_A L-hicdh, L-2-hydroxyiso 100.0 3.9E-37 1.3E-41 266.1 16.7 193 1-203 89-307 (309)
37 2ewd_A Lactate dehydrogenase,; 100.0 1E-34 3.5E-39 251.8 20.5 192 1-202 88-314 (317)
38 1y7t_A Malate dehydrogenase; N 100.0 1.3E-29 4.3E-34 220.4 19.6 193 1-204 96-324 (327)
39 1lld_A L-lactate dehydrogenase 100.0 2.7E-28 9.2E-33 210.4 20.5 191 1-201 91-317 (319)
40 1up7_A 6-phospho-beta-glucosid 100.0 2.1E-27 7E-32 213.4 18.5 181 6-202 114-376 (417)
41 1s6y_A 6-phospho-beta-glucosid 99.9 5.8E-27 2E-31 212.3 16.1 189 5-202 123-399 (450)
42 1u8x_X Maltose-6'-phosphate gl 99.9 5.8E-25 2E-29 200.1 15.2 184 4-201 141-422 (472)
43 3fef_A Putative glucosidase LP 99.6 1.6E-15 5.6E-20 137.1 13.9 78 9-93 121-206 (450)
44 1obb_A Maltase, alpha-glucosid 99.6 2.5E-15 8.4E-20 136.9 6.5 78 6-93 124-203 (480)
45 3u95_A Glycoside hydrolase, fa 98.8 6.7E-09 2.3E-13 94.5 6.5 76 9-93 134-209 (477)
46 1bb1_A Designed, thermostable 57.0 22 0.00077 19.5 4.3 27 181-207 8-34 (36)
47 4as2_A Phosphorylcholine phosp 53.9 7.3 0.00025 33.1 2.7 48 14-63 148-195 (327)
48 1to0_A Hypothetical UPF0247 pr 53.1 74 0.0025 24.3 8.2 118 12-132 18-154 (167)
49 2akf_A Coronin-1A; coiled coil 49.1 30 0.001 18.7 4.3 27 181-207 5-31 (32)
50 3ohe_A Histidine triad (HIT) p 47.5 68 0.0023 23.3 7.0 44 82-126 87-132 (137)
51 1ufz_A Hypothetical protein BA 44.7 10 0.00035 25.9 1.7 22 177-198 24-45 (83)
52 1bb1_B Designed, thermostable 44.4 39 0.0013 18.5 4.3 24 181-205 8-31 (36)
53 1l6x_B Minimized B-domain of p 43.7 11 0.00039 21.1 1.5 20 173-192 12-31 (34)
54 2e18_A NH(3)-dependent NAD(+) 38.3 53 0.0018 26.2 5.5 70 12-85 8-81 (257)
55 2ehh_A DHDPS, dihydrodipicolin 37.7 44 0.0015 27.5 5.0 50 63-126 16-65 (294)
56 3flu_A DHDPS, dihydrodipicolin 35.9 43 0.0015 27.6 4.7 50 63-126 23-72 (297)
57 2wkj_A N-acetylneuraminate lya 35.1 43 0.0015 27.8 4.6 50 63-126 27-76 (303)
58 2yxg_A DHDPS, dihydrodipicolin 34.5 41 0.0014 27.7 4.3 50 63-126 16-65 (289)
59 1o6d_A Hypothetical UPF0247 pr 33.8 1.4E+02 0.0049 22.5 7.0 119 11-132 18-148 (163)
60 3b4u_A Dihydrodipicolinate syn 33.5 50 0.0017 27.2 4.7 50 63-126 19-68 (294)
61 3cpr_A Dihydrodipicolinate syn 33.1 52 0.0018 27.3 4.7 50 63-126 32-81 (304)
62 3uan_A Heparan sulfate glucosa 32.9 24 0.00081 28.9 2.5 25 17-41 91-116 (269)
63 3fkr_A L-2-keto-3-deoxyarabona 32.7 39 0.0013 28.1 3.9 50 63-126 24-73 (309)
64 1xky_A Dihydrodipicolinate syn 32.6 53 0.0018 27.2 4.7 50 63-126 28-77 (301)
65 3si9_A DHDPS, dihydrodipicolin 32.0 53 0.0018 27.4 4.7 50 63-126 38-87 (315)
66 3l21_A DHDPS, dihydrodipicolin 31.4 54 0.0018 27.2 4.6 50 63-126 31-80 (304)
67 2v9d_A YAGE; dihydrodipicolini 30.9 58 0.002 27.6 4.8 50 63-126 47-96 (343)
68 4dpp_A DHDPS 2, dihydrodipicol 30.3 56 0.0019 28.1 4.6 50 63-126 75-124 (360)
69 3eb2_A Putative dihydrodipicol 30.2 36 0.0012 28.3 3.2 50 63-126 20-69 (300)
70 3qfe_A Putative dihydrodipicol 30.0 53 0.0018 27.5 4.3 50 63-126 27-76 (318)
71 2rfg_A Dihydrodipicolinate syn 29.9 42 0.0014 27.8 3.6 50 63-126 16-65 (297)
72 3na8_A Putative dihydrodipicol 29.6 47 0.0016 27.8 3.9 50 63-126 40-89 (315)
73 2ojp_A DHDPS, dihydrodipicolin 29.3 46 0.0016 27.4 3.7 50 63-126 17-66 (292)
74 3ueb_A Putative uncharacterize 28.6 84 0.0029 21.8 4.3 34 170-206 10-43 (110)
75 3tak_A DHDPS, dihydrodipicolin 28.5 55 0.0019 26.9 4.1 50 63-126 17-66 (291)
76 3s5o_A 4-hydroxy-2-oxoglutarat 28.3 53 0.0018 27.3 4.0 50 63-126 30-79 (307)
77 2r8w_A AGR_C_1641P; APC7498, d 27.8 52 0.0018 27.8 3.9 50 63-126 50-99 (332)
78 3fgh_A Transcription factor A, 27.7 95 0.0033 19.1 4.3 26 178-203 39-64 (67)
79 2vc6_A MOSA, dihydrodipicolina 27.6 46 0.0016 27.4 3.5 50 63-126 16-65 (292)
80 3a5f_A Dihydrodipicolinate syn 27.4 57 0.002 26.8 4.0 48 65-126 19-66 (291)
81 3h5d_A DHDPS, dihydrodipicolin 27.3 50 0.0017 27.6 3.6 50 63-126 23-72 (311)
82 1f6k_A N-acetylneuraminate lya 26.6 58 0.002 26.8 3.9 51 63-126 19-69 (293)
83 2r91_A 2-keto-3-deoxy-(6-phosp 26.1 91 0.0031 25.4 5.0 50 63-126 14-63 (286)
84 2lr2_A Immunoglobulin G-bindin 26.0 34 0.0012 23.0 1.8 21 172-192 28-48 (88)
85 3p52_A NH(3)-dependent NAD(+) 25.6 1.7E+02 0.0059 23.3 6.6 68 12-84 12-85 (249)
86 1o5k_A DHDPS, dihydrodipicolin 25.5 57 0.002 27.0 3.7 49 64-126 29-77 (306)
87 1zda_A Mini protein A domain, 25.0 14 0.00049 21.2 -0.1 20 172-191 16-35 (38)
88 3daq_A DHDPS, dihydrodipicolin 24.1 69 0.0024 26.3 3.9 49 64-126 19-67 (292)
89 3rnl_A Sulfotransferase; struc 23.5 43 0.0015 27.8 2.5 26 16-41 98-124 (311)
90 3qze_A DHDPS, dihydrodipicolin 22.7 61 0.0021 27.0 3.4 50 63-126 39-88 (314)
91 3e96_A Dihydrodipicolinate syn 22.6 75 0.0026 26.4 3.9 50 63-126 28-77 (316)
92 1obb_A Maltase, alpha-glucosid 22.6 2.5E+02 0.0085 24.9 7.5 54 146-200 355-432 (480)
93 3dz1_A Dihydrodipicolinate syn 22.4 72 0.0025 26.5 3.7 50 63-126 24-73 (313)
94 3d0c_A Dihydrodipicolinate syn 22.2 60 0.002 27.1 3.2 50 63-126 28-77 (314)
95 2yfv_C SCM3, KLLA0F05115P; cel 22.0 1.5E+02 0.005 18.9 4.2 12 176-187 15-26 (63)
96 2ba3_A NIKA; dimer, bacterial 21.4 46 0.0016 19.6 1.7 20 174-194 18-37 (51)
97 1g2c_B Fusion protein (F); mem 21.4 1.1E+02 0.0038 17.9 3.2 24 185-208 10-33 (43)
98 3m5v_A DHDPS, dihydrodipicolin 20.9 97 0.0033 25.5 4.2 50 63-126 23-72 (301)
99 3nrd_A Histidine triad (HIT) p 20.7 1.5E+02 0.0052 21.2 4.8 42 84-126 91-134 (135)
100 4h08_A Putative hydrolase; GDS 20.5 92 0.0031 23.0 3.7 26 14-39 98-124 (200)
101 3bzw_A Putative lipase; protei 20.3 86 0.0029 24.7 3.7 25 13-37 146-170 (274)
No 1
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=100.00 E-value=7.7e-50 Score=347.20 Aligned_cols=200 Identities=54% Similarity=0.812 Sum_probs=181.1
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCC-CCCCeEEeehhhHHHHHHHHHHHhC
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVF-DPRRLFGVTTLDIVRANTFVAEAKG 79 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~-~~~~ViG~~~LDs~R~~~~la~~l~ 79 (208)
|+|+||+..|++|++++++++.++||+++++++|||+|+|+|++++++ +.+|+ |++||+|+|.||++||++++|+++|
T Consensus 85 ~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNPvd~~t~~a~~~~-k~sg~~p~~rv~G~~~LD~~R~~~~la~~lg 163 (312)
T 3hhp_A 85 MDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPVNTTVAIAAEVL-KKAGVYDKNKLFGVTTLDIIRSNTFVAELKG 163 (312)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSSCHHHHHHHHHHHH-HHTTCCCTTSEEECCHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecCcchhHHHHHHHHH-HHcCCCCcceEEEEechhHHHHHHHHHHHhC
Confidence 799999999999999999999999999999999999999998766555 55566 9999999999999999999999999
Q ss_pred CCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH----HHHhhcccccCCccchHH-HHHHHHHhhh
Q psy9933 80 LNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA----VSLKNGIEKNLGLGKLSD-FEKERQQFSP 154 (208)
Q Consensus 80 v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~----~~~~~~k~~~~g~~~~~~-~a~~~~i~ai 154 (208)
++|++|++||||||||+|++|+||++ +...++++++++|.++|+++ ++.|.|+ |||+||+ +|+++++++|
T Consensus 164 v~~~~v~~~V~G~Hsg~t~vp~~S~~-~g~~~~~~~~~~i~~~v~~~g~eIi~~k~g~----gst~~s~a~a~~~~~~ai 238 (312)
T 3hhp_A 164 KQPGEVEVPVIGGHSGVTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGG----GSATLSMGQAAARFGLSL 238 (312)
T ss_dssp CCGGGCCCCEEECSSGGGEEECGGGC-TTCCCCHHHHHHHHHHHHTHHHHHHHHTTTS----CCCCHHHHHHHHHHHHHH
T ss_pred cChhHcceeEEeccCCCceeeecccC-CCCCCCHHHHHHHHHHHHhhhHHHHhhccCC----CCchhHHHHHHHHHHHHH
Confidence 99999999999999999999999998 43458889999999999998 4445566 8999999 9999999998
Q ss_pred ---c-C-------------CCCcEEEe----ecCCeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy9933 155 ---F-I-------------KTFASFFS----PQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKGEEFVA 206 (208)
Q Consensus 155 ---~-~-------------~~~~~~~s----ig~~Gv~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~~~~~~~ 206 (208)
+ | .++++||| +|++||++++++++||++|+++|++|++.|++.++++++|+.
T Consensus 239 ~~~l~~~~~v~~~s~~~g~g~~~v~~s~P~~~g~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~i~~g~~~~~ 311 (312)
T 3hhp_A 239 VRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKKDIALGEEFVN 311 (312)
T ss_dssp HHHHTTCSSCEEEEEEECCCSSCSEEEEEEEEETTEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHcCCCCceEEEEEecCCCCcceEEEeEEEEeCCEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3 2 13578999 999999999998679999999999999999999999999975
No 2
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=100.00 E-value=2.3e-48 Score=340.32 Aligned_cols=191 Identities=24% Similarity=0.269 Sum_probs=172.2
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEee-hhhHHHHHHHHHHHhC
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVT-TLDIVRANTFVAEAKG 79 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~-~LDs~R~~~~la~~l~ 79 (208)
|+|+||+..|++|+++++++++++||+++++++|||+|+++ +++++.+|||++||||+| .||++|+++++|+++|
T Consensus 103 ~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNPvdi~t----~~~~k~sg~p~~rviG~gt~LD~~R~~~~la~~lg 178 (331)
T 4aj2_A 103 ESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNPVDILT----YVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLG 178 (331)
T ss_dssp CCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHH----HHHHHHHCCCGGGEEECTTHHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChHHHHH----HHHHHHhCCCHHHEEeeccccHHHHHHHHHHHHhC
Confidence 79999999999999999999999999999999999999975 577888899999999995 6999999999999999
Q ss_pred CCCCccccceeccCCCCceeecccCCCCC------------CCCCHHHHHHHHHHHHHH-HHHhhcccccCCccchHH-H
Q psy9933 80 LNPTDVNVPVIGGHAGITIIPLISQATPS------------VSFPDDQLKALTGRIQEA-VSLKNGIEKNLGLGKLSD-F 145 (208)
Q Consensus 80 v~~~~v~~~ViGeH~g~~~vp~~S~~~~~------------~~~~~~~~~~l~~~v~~~-~~~~~~k~~~~g~~~~~~-~ 145 (208)
++|++|++|||||| |+++||+||++++. ..++++++++|.++++++ +++.++| |+|+||+ +
T Consensus 179 v~~~~V~~~ViGeH-G~s~vp~~S~~~v~G~p~~~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~k----g~t~~a~a~ 253 (331)
T 4aj2_A 179 VHPLSCHGWVLGEH-GDSSVPVWSGVNVAGVSLKSLNPQLGTDADKEQWKDVHKQVVDSAYEVIKLK----GYTSWAIGL 253 (331)
T ss_dssp SCGGGCBCCEEBCS-STTCEECGGGCEETTEEHHHHCTTTTSTTCTTCTHHHHHHHHHHHHHHHHHH----SSCCHHHHH
T ss_pred CCHHHCEEeEEecC-CCceeEeeecCeECCEEHHHHHhhccCCCCHHHHHHHHHHHHHhHHHHhhcC----CCCchhHHH
Confidence 99999999999999 89999999999732 124567789999999998 7777778 9999999 9
Q ss_pred HHHHHHhhhc-C----------------CCCcEEEe----ecCCeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy9933 146 EKERQQFSPF-I----------------KTFASFFS----PQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKGE 202 (208)
Q Consensus 146 a~~~~i~ai~-~----------------~~~~~~~s----ig~~Gv~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~~~ 202 (208)
|+++++++|+ | .++++||| +|++|+++++++ +||++|+++|++|++.|++ +.+++
T Consensus 254 a~a~~~~ail~d~~~~~~vs~~~~g~ygi~~~v~~s~P~~lg~~Gv~~iv~l-~L~~~E~~~l~~s~~~l~~-~~~~~ 329 (331)
T 4aj2_A 254 SVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGISDVVKV-TLTPDEEARLKKSADTLWG-IQKEL 329 (331)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEECTTGGGCCSCCEEEEEEEEETTEEEEEECC-CCCHHHHHHHHHHHHHHHH-HHTTC
T ss_pred HHHHHHHHHHhCCCCeEEEEEecCCccCCcCceEEEEEEEEcCCeeEEEccC-CCCHHHHHHHHHHHHHHHH-HHhhc
Confidence 9999999996 1 13579999 999999999998 8999999999999999998 44443
No 3
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=100.00 E-value=9.1e-48 Score=334.42 Aligned_cols=196 Identities=23% Similarity=0.349 Sum_probs=175.9
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEee-hhhHHHHHHHHHHHhC
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVT-TLDIVRANTFVAEAKG 79 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~-~LDs~R~~~~la~~l~ 79 (208)
|+|+||+..|++|++++++++.++||+++++++|||+|++|| ++++.+|||++||+|+| .||++||++++|+++|
T Consensus 85 ~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPvd~~t~----~~~k~~g~p~~rviG~~t~LD~~R~~~~la~~lg 160 (314)
T 3nep_X 85 MSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANPLDVMTY----VAYEASGFPTNRVMGMAGVLDTGRFRSFIAEELD 160 (314)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSSHHHHHH----HHHHHHTCCGGGEEECCHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCCchhHHHH----HHHHhcCCChHHEEeecCchHHHHHHHHHHHHhC
Confidence 689999999999999999999999999999999999999876 56778899999999997 6999999999999999
Q ss_pred CCCCccccceeccCCCCceeecccCCCCC----CC-CCHHHHHHHHHHHHHH-HHHhhcccccCC-ccchHH-HHHHHHH
Q psy9933 80 LNPTDVNVPVIGGHAGITIIPLISQATPS----VS-FPDDQLKALTGRIQEA-VSLKNGIEKNLG-LGKLSD-FEKERQQ 151 (208)
Q Consensus 80 v~~~~v~~~ViGeH~g~~~vp~~S~~~~~----~~-~~~~~~~~l~~~v~~~-~~~~~~k~~~~g-~~~~~~-~a~~~~i 151 (208)
++|++|++|||||| |+|+||+||++++. .+ +++++++++.++++++ +++.+.| | +|+||+ +|+++|+
T Consensus 161 v~~~~v~~~ViG~H-g~t~vp~~S~~~v~g~p~~~~~~~~~~~~i~~~v~~~g~eIi~~k----g~sa~~a~a~a~~~~~ 235 (314)
T 3nep_X 161 VSVRDVQALLMGGH-GDTMVPLPRYTTVGGIPVPQLIDDARIEEIVERTKGAGGEIVDLM----GTSAWYAPGAAAAEMT 235 (314)
T ss_dssp CCGGGEEEEEEESS-GGGEEEEEEEEEETTEEGGGTSCHHHHHHHHHHHHTHHHHHHHHH----SSCCCHHHHHHHHHHH
T ss_pred cCHHHeEEEEECCC-CCcEEeeeecCeECcEehhhccCHHHHHHHHHHHHHhHHHHHhcc----CCcHHHHHHHHHHHHH
Confidence 99999999999999 88999999999742 33 5778899999999998 6666566 6 899999 9999999
Q ss_pred hhhc-CC---------------CCcEEEe----ecCCeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy9933 152 FSPF-IK---------------TFASFFS----PQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKGEEFVA 206 (208)
Q Consensus 152 ~ai~-~~---------------~~~~~~s----ig~~Gv~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~~~~~~~ 206 (208)
++|+ +. .+++||| +|++||++++++ +||++|+++|++|++.|++.+++...++.
T Consensus 236 ~ail~~~~~v~~~s~~~~g~yg~~~~~~s~P~~lg~~Gv~~v~~l-~L~~~E~~~l~~s~~~l~~~~~~~~~~l~ 309 (314)
T 3nep_X 236 EAILKDNKRILPCAAYCDGEYGLDDLFIGVPVKLGAGGVEEVIEV-DLDADEKAQLKTSAGHVHSNLDDLQRLRD 309 (314)
T ss_dssp HHHHHTCCEEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCeEEEEEEEeccccCCCceEEEEEEEEeCCEEEEecCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9996 21 1368999 999999999999 89999999999999999999999887774
No 4
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=100.00 E-value=1.1e-46 Score=327.45 Aligned_cols=203 Identities=64% Similarity=0.956 Sum_probs=188.4
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEeehhhHHHHHHHHHHHhCC
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVTTLDIVRANTFVAEAKGL 80 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~~LDs~R~~~~la~~l~v 80 (208)
|+|+|++..|+++++++++.+.+++|+++++++|||+|++++++++++++.++||++||+|++.||++|+++++|+++|+
T Consensus 84 ~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~~~~~~~~~~~p~~rvig~t~Ld~~r~~~~la~~l~v 163 (314)
T 1mld_A 84 MTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVNSTIPITAEVFKKHGVYNPNKIFGVTTLDIVRANAFVAELKGL 163 (314)
T ss_dssp CCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCHHHHHHHHHHHHHHTTCCCTTSEEECCHHHHHHHHHHHHHHTTC
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCCcchhHHHHHHHHHHcCCCCcceEEEeecccHHHHHHHHHHHhCc
Confidence 68999999999999999999999999999999999999999999999999999999999999889999999999999999
Q ss_pred CCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH----HHHhhcccccCCccchHH-HHHHHHHhhhc
Q psy9933 81 NPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA----VSLKNGIEKNLGLGKLSD-FEKERQQFSPF 155 (208)
Q Consensus 81 ~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~----~~~~~~k~~~~g~~~~~~-~a~~~~i~ai~ 155 (208)
+|++|+++|+|||+|++++|+||+++|..++++++++++.++++++ ++.+.|+ |+|+||+ .|+++++++|+
T Consensus 164 ~~~~v~~~v~G~H~G~~~~p~~s~~~~~~~~~~~~~~~~~~~v~~~g~eii~~k~~~----g~t~~~~a~a~~~~~~ai~ 239 (314)
T 1mld_A 164 DPARVSVPVIGGHAGKTIIPLISQCTPKVDFPQDQLSTLTGRIQEAGTEVVKAKAGA----GSATLSMAYAGARFVFSLV 239 (314)
T ss_dssp CGGGCBCCEEECSSGGGEEECGGGCBSCCCCCHHHHHHHHHHHHHHHHHHHHHHTTS----CSCCHHHHHHHHHHHHHHH
T ss_pred ChHhEEEEEccCCCCCcEeeecccCCCcccCCHHHHHHHHHHHHHHHHHHHhhhcCC----CCcchhHHHHHHHHHHHHH
Confidence 9999999999999879999999999987678899999999999987 4444477 9999999 99999999986
Q ss_pred -C---C-------------CCcEEEe----ecCCeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy9933 156 -I---K-------------TFASFFS----PQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKGEEFVAK 207 (208)
Q Consensus 156 -~---~-------------~~~~~~s----ig~~Gv~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~~~~~~~~ 207 (208)
| . ++++||| +|++|+++++++++|+++|+++|++|++.|++.++++++|+..
T Consensus 240 ~~~~g~~~v~~~~~~~g~y~~~~~~~~P~~ig~~Gv~~i~~l~~l~~~e~~~l~~s~~~l~~~~~~~~~~~~~ 312 (314)
T 1mld_A 240 DAMNGKEGVVECSFVKSQETDCPYFSTPLLLGKKGIEKNLGIGKISPFEEKMIAEAIPELKASIKKGEEFVKN 312 (314)
T ss_dssp HHHHTCTTCEEEEEEECCSSSSSEEEEEEEEETTEEEEECCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cCcCCCcceEEEEEeCCccCCceEEEEEEEEeCCeeEEecCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2 1 4678999 9999999999986799999999999999999999999998754
No 5
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=100.00 E-value=1e-47 Score=331.22 Aligned_cols=184 Identities=24% Similarity=0.256 Sum_probs=164.4
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEee-hhhHHHHHHHHHHHhC
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVT-TLDIVRANTFVAEAKG 79 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~-~LDs~R~~~~la~~l~ 79 (208)
|||+|||..|++|+++++++++++||+++++|+|||+|+||| ++|+.+|||++||||++ +|||+||++++++.++
T Consensus 85 mtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsNPvd~~t~----i~~k~sg~p~~rvig~gT~LDs~R~~~~l~~~~~ 160 (294)
T 2x0j_A 85 MTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPMDVMTY----IMWKESGKPRNEVFGMGNQLDSQRLKERLYNAGA 160 (294)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSHHHHHH----HHHHHSSCCTTSEEECCHHHHHHHHHHHHHHTTC
T ss_pred CchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCcchhhHH----hhHHHcCCChhhEEEeeeEEeHHHHHHHHhhccc
Confidence 799999999999999999999999999999999999999865 67899999999999996 5999999999999988
Q ss_pred CCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH-HHHhhcccccCCccchHH-HHHHHHHhhhc-C
Q psy9933 80 LNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA-VSLKNGIEKNLGLGKLSD-FEKERQQFSPF-I 156 (208)
Q Consensus 80 v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~-~~~~~~k~~~~g~~~~~~-~a~~~~i~ai~-~ 156 (208)
+++. +++|+||| |+|++|+||++++.. ..+++++.++++++ +++..+| |+|+||+ +|+++++++|+ |
T Consensus 161 ~~~~--~~~V~G~H-Gdt~vp~~S~~~v~g---~~~~~~i~~~~~~~g~eIi~~k----Gst~~a~a~a~~~~~~ail~d 230 (294)
T 2x0j_A 161 RNIR--RAWIIGEH-GDSMFVAKSLADFDG---EVDWEAVENDVRFVAAEVIKRK----GATIFGPAVAIYRMVKAVVED 230 (294)
T ss_dssp EEEC--CCCEEBCS-STTCEECGGGCCEES---CCCHHHHHHHHHTHHHHHHHHH----SSCCHHHHHHHHHHHHHHHTT
T ss_pred CCcc--eeEEEecC-CCcEEEeeeccCCCC---chhHHHHHHHHhhhheEEEecC----cccchhHHHHHHHHHHHHHcC
Confidence 7654 79999999 999999999998532 23467888999988 7777788 9999999 99999999996 2
Q ss_pred C---------------CCcEEEe----ecCCeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9933 157 K---------------TFASFFS----PQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAK 200 (208)
Q Consensus 157 ~---------------~~~~~~s----ig~~Gv~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~ 200 (208)
. .+++||| ||++||+ ++++ +||++|+++|++|++.||+.+++
T Consensus 231 ~~~v~~~s~~l~g~yG~~~v~~s~P~~lg~~Gve-i~~l-~L~~~E~~~l~~s~~~lk~~i~~ 291 (294)
T 2x0j_A 231 TGEIIPTSMILQGEYGIENVAVGVPAKLGKNGAE-VADI-KLSDEEIEKLRNSAKILRERLEE 291 (294)
T ss_dssp CCCEEEEEEEEESGGGCEEEEEEEEEEEETTEEE-ECCC-CCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcEEEEEEEEecCCCCccEEEEEEEEEeCCEEE-EeCC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 1 1468999 9999995 8898 89999999999999999998875
No 6
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=100.00 E-value=2e-47 Score=332.46 Aligned_cols=190 Identities=27% Similarity=0.423 Sum_probs=172.8
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEee-hhhHHHHHHHHHHHhC
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVT-TLDIVRANTFVAEAKG 79 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~-~LDs~R~~~~la~~l~ 79 (208)
|+|+||+..|++|++++++++.++||+++++++|||+|+++| ++++.+|||++||+|+| .||++|+++++|+++|
T Consensus 94 ~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNPvd~~t~----~~~k~sg~p~~rviG~gt~LD~~R~~~~la~~lg 169 (315)
T 3tl2_A 94 MSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNPVDAMTY----SVFKEAGFPKERVIGQSGVLDTARFRTFIAQELN 169 (315)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHH----HHHHHHCCCGGGEEECCHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCChHHHHHH----HHHHhcCCChHHEEeeccCcHHHHHHHHHHHHhC
Confidence 789999999999999999999999999999999999999876 56778899999999995 6999999999999999
Q ss_pred CCCCccccceeccCCCCceeecccCCCC----CCC-CCHHHHHHHHHHHHHH-HHHhh--cccccCCccchHH-HHHHHH
Q psy9933 80 LNPTDVNVPVIGGHAGITIIPLISQATP----SVS-FPDDQLKALTGRIQEA-VSLKN--GIEKNLGLGKLSD-FEKERQ 150 (208)
Q Consensus 80 v~~~~v~~~ViGeH~g~~~vp~~S~~~~----~~~-~~~~~~~~l~~~v~~~-~~~~~--~k~~~~g~~~~~~-~a~~~~ 150 (208)
++|++|++|||||| |+++||+||++++ ..+ ++++++++|.++++++ +++.+ || |+|+||+ +|++++
T Consensus 170 v~~~~v~~~viG~H-g~t~vp~~S~~~v~g~p~~~~~~~~~~~~i~~~v~~~g~eii~~~~k----gst~~a~a~a~~~~ 244 (315)
T 3tl2_A 170 LSVKDITGFVLGGH-GDDMVPLVRYSYAGGIPLETLIPKERLEAIVERTRKGGGEIVGLLGN----GSAYYAPAASLVEM 244 (315)
T ss_dssp CCGGGEECCEEBCS-GGGCEECGGGCEETTEEGGGTSCHHHHHHHHHHHHTHHHHHHHHHSS----SCCCHHHHHHHHHH
T ss_pred cCHHHceeeEecCC-CCcceeecccCeECCEEHHHhCCHHHHHHHHHHHHHHHHHHHHhcCC----CcchHHHHHHHHHH
Confidence 99999999999999 8999999999974 233 6788899999999998 66655 88 9999999 999999
Q ss_pred Hhhhc-CC---------------CCcEEEe----ecCCeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9933 151 QFSPF-IK---------------TFASFFS----PQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAK 200 (208)
Q Consensus 151 i~ai~-~~---------------~~~~~~s----ig~~Gv~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~ 200 (208)
+++|+ +. .+++||| +|++||++++++ +|+++|+++|++|++.|++.++.
T Consensus 245 ~~ail~~~~~v~~~s~~~~g~yg~~~~~~s~P~~~g~~Gv~~v~~l-~L~~~E~~~l~~s~~~l~~~~~~ 313 (315)
T 3tl2_A 245 TEAILKDQRRVLPAIAYLEGEYGYSDLYLGVPVILGGNGIEKIIEL-ELLADEKEALDRSVESVRNVMKV 313 (315)
T ss_dssp HHHHHTTCCEEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCCcEEEEEEeccCccCCCceEEEEEEEEeCCEEEEEcCC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 99996 21 1368999 999999999999 79999999999999999998764
No 7
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=100.00 E-value=4.4e-47 Score=327.44 Aligned_cols=184 Identities=24% Similarity=0.253 Sum_probs=168.0
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEee-hhhHHHHHHHHHHHhC
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVT-TLDIVRANTFVAEAKG 79 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~-~LDs~R~~~~la~~l~ 79 (208)
|+|+||+..|++|+++++++++++||+++++++|||+|+|| +++|+.+|||++||+|+| .||++||++++| ++|
T Consensus 85 ~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNPvd~~t----~~~~k~~g~p~~rviG~gt~LD~~R~~~~la-~l~ 159 (294)
T 1oju_A 85 MTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPMDVMT----YIMWKESGKPRNEVFGMGNQLDSQRLKERLY-NAG 159 (294)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSHHHHH----HHHHHHSCCCTTSEEECSHHHHHHHHHHHHH-HTT
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcchHHH----HHHHHhcCCCHHHEeecccccHHHHHHHHHH-HhC
Confidence 68999999999999999999999999999999999999985 577889999999999996 599999999999 999
Q ss_pred CCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH-HHHhhcccccCCccchHH-HHHHHHHhhhc-C
Q psy9933 80 LNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA-VSLKNGIEKNLGLGKLSD-FEKERQQFSPF-I 156 (208)
Q Consensus 80 v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~-~~~~~~k~~~~g~~~~~~-~a~~~~i~ai~-~ 156 (208)
++|++ ++|||||| |+++||+||++++. ..+ +++++.++++++ +++.++| |+|+||+ +|+++++++|+ |
T Consensus 160 v~~~~-~~~V~G~H-g~t~vp~~s~~~v~-g~~--~~~~~~~~v~~~g~eii~~k----G~t~~~~a~a~~~~~~ail~~ 230 (294)
T 1oju_A 160 ARNIR-RAWIIGEH-GDSMFVAKSLADFD-GEV--DWEAVENDVRFVAAEVIKRK----GATIFGPAVAIYRMVKAVVED 230 (294)
T ss_dssp CBSCC-CCCEEBCS-STTCEECGGGCCCB-SCC--CHHHHHHHHHTTHHHHHHHH----SSCCHHHHHHHHHHHHHHHTT
T ss_pred CCccC-ceEEEecC-CCceeeecccceEC-CcC--hHHHHHHHHHHHHHHHHHhc----CCcchHHHHHHHHHHHHHHcC
Confidence 99999 99999999 99999999999863 233 688999999998 7776678 9999999 99999999996 1
Q ss_pred --------------C-CCcEEEe----ecCCeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9933 157 --------------K-TFASFFS----PQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAK 200 (208)
Q Consensus 157 --------------~-~~~~~~s----ig~~Gv~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~ 200 (208)
+ .+++||| +|++||+ ++++ +|+++|+++|++|++.|++.+++
T Consensus 231 ~~~v~~~s~~~~g~yg~~~~~~s~P~~~g~~Gv~-v~~l-~L~~~E~~~l~~s~~~l~~~~~~ 291 (294)
T 1oju_A 231 TGEIIPTSMILQGEYGIENVAVGVPAKLGKNGAE-VADI-KLSDEEIEKLRNSAKILRERLEE 291 (294)
T ss_dssp CCCEEEEEEEEESGGGCEEEEEEEEEEEETTEEE-ECCC-CCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCeEEEEEecccccCCCCceEEEEEEEEeCCEEE-EecC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence 1 1278999 8999999 9999 89999999999999999998875
No 8
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=100.00 E-value=2.2e-47 Score=333.49 Aligned_cols=191 Identities=22% Similarity=0.274 Sum_probs=173.3
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEee-hhhHHHHHHHHHHHhC
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVT-TLDIVRANTFVAEAKG 79 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~-~LDs~R~~~~la~~l~ 79 (208)
|+|+||+..|++|++++++++.++||+++++++|||+|+++ +++++.+|||++||+|+| .||++|+++++|+++|
T Consensus 89 ~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNPvd~~t----~~~~k~~g~p~~rviG~gt~LD~~R~~~~la~~lg 164 (326)
T 3pqe_A 89 ETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNPVDILT----YATWKFSGLPKERVIGSGTTLDSARFRFMLSEYFG 164 (326)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHH----HHHHHHHCCCGGGEEECTTHHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCChHHHHH----HHHHHhcCCCHHHEEeeccccHHHHHHHHHHHHhC
Confidence 68999999999999999999999999999999999999975 567888999999999995 6999999999999999
Q ss_pred CCCCccccceeccCCCCceeecccCCCCC----CC-------CCHHHHHHHHHHHHHH-HHHhhcccccCCccchHH-HH
Q psy9933 80 LNPTDVNVPVIGGHAGITIIPLISQATPS----VS-------FPDDQLKALTGRIQEA-VSLKNGIEKNLGLGKLSD-FE 146 (208)
Q Consensus 80 v~~~~v~~~ViGeH~g~~~vp~~S~~~~~----~~-------~~~~~~~~l~~~v~~~-~~~~~~k~~~~g~~~~~~-~a 146 (208)
++|++|++|||||| |+|+||+||++++. .+ ++++++++|.++++++ +++.++| |+|+||+ +|
T Consensus 165 v~~~~V~~~V~GeH-G~t~vp~~S~~~v~g~p~~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~k----G~t~~a~a~a 239 (326)
T 3pqe_A 165 AAPQNVCAHIIGEH-GDTELPVWSHANVGGVPVSELVEKNDAYKQEELDQIVDDVKNAAYHIIEKK----GATYYGVAMS 239 (326)
T ss_dssp CCGGGEECCEEBSS-STTCEECGGGCEETTEEHHHHHHTCTTSCHHHHHHHHHHHHHHHHHHHHHH----SCCCHHHHHH
T ss_pred CCHHHceeeeeecC-CCceeeeeeeeeECCEEHHHHhhcccCCCHHHHHHHHHHHHhhhheeeeCC----CCcHHHHHHH
Confidence 99999999999999 99999999999742 11 2677899999999998 7777788 9999999 99
Q ss_pred HHHHHhhhc-CC---------------CCcEEEe----ecCCeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9933 147 KERQQFSPF-IK---------------TFASFFS----PQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKG 201 (208)
Q Consensus 147 ~~~~i~ai~-~~---------------~~~~~~s----ig~~Gv~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~~ 201 (208)
+++++++|+ |. .+++||| +|++|+++++++ +||++|+++|++|++.|++.+++.
T Consensus 240 ~~~~~~ail~~~~~v~~~s~~~~g~yg~~~v~~s~P~~lg~~Gv~~iv~l-~L~~~E~~~l~~s~~~l~~~~~~~ 313 (326)
T 3pqe_A 240 LARITKAILHNENSILTVSTYLDGQYGADDVYIGVPAVVNRGGIAGITEL-NLNEKEKEQFLHSAGVLKNILKPH 313 (326)
T ss_dssp HHHHHHHHHTTCCEEECCEEEEESGGGCEEEEEECCEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHhcCCCcEEEEEEeeccccCCCceEEEEEEEEcCCceEEEecC-CCCHHHHHHHHHHHHHHHHHHHHh
Confidence 999999996 21 1369999 899999999998 799999999999999999988764
No 9
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=100.00 E-value=4.6e-48 Score=337.75 Aligned_cols=193 Identities=22% Similarity=0.287 Sum_probs=159.0
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEee-hhhHHHHHHHHHHHhC
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVT-TLDIVRANTFVAEAKG 79 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~-~LDs~R~~~~la~~l~ 79 (208)
|+|+||+..|++|++++++.+.++||+++++++|||+|+++ +++|+.+|||++||+|+| .||++|+++++|+++|
T Consensus 92 ~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNPvdi~t----~~~~k~~g~p~~rviG~gt~LD~~R~~~~la~~lg 167 (326)
T 3vku_A 92 ETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVDILT----YATWKLSGFPKNRVVGSGTSLDTARFRQSIAKMVN 167 (326)
T ss_dssp ------------CHHHHHHHHHTTTCCSEEEECSSSHHHHH----HHHHHHHCCCGGGEEECTTHHHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCchHHHH----HHHHHhcCCCHHHeeeecccCcHHHHHHHHHHHhC
Confidence 78999999999999999999999999999999999999975 577888999999999995 6999999999999999
Q ss_pred CCCCccccceeccCCCCceeecccCCCCCC----C-------CCHHHHHHHHHHHHHH-HHHhhcccccCCccchHH-HH
Q psy9933 80 LNPTDVNVPVIGGHAGITIIPLISQATPSV----S-------FPDDQLKALTGRIQEA-VSLKNGIEKNLGLGKLSD-FE 146 (208)
Q Consensus 80 v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~----~-------~~~~~~~~l~~~v~~~-~~~~~~k~~~~g~~~~~~-~a 146 (208)
++|++|++|||||| |+|+||+||++++.. + ++++++++|.++++++ +++.++| |+|+||+ +|
T Consensus 168 v~~~~V~~~ViGeH-Gdt~vp~~S~a~v~g~pl~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~k----G~t~~a~a~a 242 (326)
T 3vku_A 168 VDARSVHAYIMGEH-GDTEFPVWSHANIGGVTIAEWVKAHPEIKEDKLVKMFEDVRNKAYEIIKLK----GATFYGIATA 242 (326)
T ss_dssp SCGGGEECCEEBSS-STTCEECGGGCEETTEEHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHH----SCCCHHHHHH
T ss_pred CCHHHCeEEEEcCC-CCeeEEeeeccccCCEEHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhcC----CCchHHHHHH
Confidence 99999999999999 999999999997431 1 2567789999999998 7777788 9999999 99
Q ss_pred HHHHHhhhc-CC------------C---CcEEEe----ecCCeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q psy9933 147 KERQQFSPF-IK------------T---FASFFS----PQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKGEE 203 (208)
Q Consensus 147 ~~~~i~ai~-~~------------~---~~~~~s----ig~~Gv~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~~~~ 203 (208)
+++++++|+ |. . +++||| +|++|+++++++ +||++|+++|++|++.|++.+++...
T Consensus 243 ~~~~~~ail~~~~~v~~~s~~~~g~yg~~~v~~s~P~~lg~~Gv~~iv~l-~L~~~E~~~l~~sa~~L~~~~~~~~~ 318 (326)
T 3vku_A 243 LARISKAILNDENAVLPLSVYMDGQYGLNDIYIGTPAVINRNGIQNILEI-PLTDHEEESMQKSASQLKKVLTDAFA 318 (326)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEEEEGGGEEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHCC------
T ss_pred HHHHHHHHhcCCCceEEEEeeccCccCCCceEEEEEEEEcCCceEEEecC-CCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999996 21 1 368999 899999999998 89999999999999999998887643
No 10
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=100.00 E-value=6.2e-47 Score=330.12 Aligned_cols=195 Identities=23% Similarity=0.363 Sum_probs=176.2
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEee-hhhHHHHHHHHHHHhC
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVT-TLDIVRANTFVAEAKG 79 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~-~LDs~R~~~~la~~l~ 79 (208)
|+|+||+..|++|++++++++.++||+++++++|||+|+++ +++++.+|||++||+|+| .||++||++++|+++|
T Consensus 89 ~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPvd~~t----~~~~k~sg~p~~rviG~~~~LD~~R~~~~la~~l~ 164 (321)
T 3p7m_A 89 MSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITNPLDIMV----NMLQKFSGVPDNKIVGMAGVLDSARFRTFLADELN 164 (321)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHH----HHHHHHHCCCGGGEEEECHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecCchHHHH----HHHHHhcCCCHHHEEeeccchHHHHHHHHHHHHhC
Confidence 68999999999999999999999999999999999999986 467888999999999998 6999999999999999
Q ss_pred CCCCccccceeccCCCCceeecccCCCCC----CC------CCHHHHHHHHHHHHHH-HHHhh--cccccCCccchHH-H
Q psy9933 80 LNPTDVNVPVIGGHAGITIIPLISQATPS----VS------FPDDQLKALTGRIQEA-VSLKN--GIEKNLGLGKLSD-F 145 (208)
Q Consensus 80 v~~~~v~~~ViGeH~g~~~vp~~S~~~~~----~~------~~~~~~~~l~~~v~~~-~~~~~--~k~~~~g~~~~~~-~ 145 (208)
++|++|+++||||| |++++|+||++++. .+ +++++++++.++++++ +++.. || |||+||+ +
T Consensus 165 v~~~~v~~~v~G~H-G~t~~p~~s~~~v~g~p~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~~g~----gsa~~~~a~ 239 (321)
T 3p7m_A 165 VSVQQVQAYVMGGH-GDTMVPLTKMSNVAGVSLEQLVKEGKLKQERLDAIVSRTRSGGGEIVALLKT----GSAYYAPAA 239 (321)
T ss_dssp CCGGGEECCEEECS-GGGEEECTTTCEETTEEHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHHHHSS----SCCCHHHHH
T ss_pred cCHHHceEeeecCc-CCceeeeeeeceECCEehhhhccccCCCHHHHHHHHHHHHhhhHHHHHhcCC----CChHHHHHH
Confidence 99999999999999 99999999999742 12 4778899999999987 44433 77 9999999 9
Q ss_pred HHHHHHhhhc-------------C-----CCCcEEEe----ecCCeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q psy9933 146 EKERQQFSPF-------------I-----KTFASFFS----PQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKGEE 203 (208)
Q Consensus 146 a~~~~i~ai~-------------~-----~~~~~~~s----ig~~Gv~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~~~~ 203 (208)
|+++++++|+ + .++++||| +|++||+++ ++ +||++|+++|++|++.|++.++....
T Consensus 240 a~~~~~~ail~~~~~v~~~s~~~~~g~ygi~~~v~~s~P~~~g~~Gv~~v-~l-~L~~~E~~~l~~s~~~l~~~~~~~~~ 317 (321)
T 3p7m_A 240 AGIQMAESFLKDKKMILPCAAKVKAGMYGLDEDLFVGVPTEISANGVRPI-EV-EISDKEREQLQVSINAIKDLNKAAAE 317 (321)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEEECTTGGGCSSCEEEEEEEEEETTEEEEC-CC-CCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcEEEEEEEccCcccCCCCCeEEEEEEEEcCCEEEEe-CC-CCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999996 2 12378999 999999999 99 89999999999999999999999887
Q ss_pred HHh
Q psy9933 204 FVA 206 (208)
Q Consensus 204 ~~~ 206 (208)
+|+
T Consensus 318 ~l~ 320 (321)
T 3p7m_A 318 ILA 320 (321)
T ss_dssp HHC
T ss_pred Hhh
Confidence 765
No 11
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=100.00 E-value=1.3e-46 Score=328.44 Aligned_cols=193 Identities=23% Similarity=0.337 Sum_probs=171.3
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEee-hhhHHHHHHHHHHHhC
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVT-TLDIVRANTFVAEAKG 79 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~-~LDs~R~~~~la~~l~ 79 (208)
|+|+||+..|++|++++++++.++||+++++++|||+|++|+ ++++.+|||++||+|+| .||++|+++++|+++|
T Consensus 91 ~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNPvd~~t~----~~~k~sg~p~~rviG~~~~LD~~R~~~~la~~lg 166 (324)
T 3gvi_A 91 MSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNPLDAMVW----ALQKFSGLPAHKVVGMAGVLDSARFRYFLSEEFN 166 (324)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHH----HHHHHHCCCGGGEEECCHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCCcHHHHH----HHHHhcCCCHHHEEeecCccHHHHHHHHHHHHhC
Confidence 689999999999999999999999999999999999999865 57788999999999998 6999999999999999
Q ss_pred CCCCccccceeccCCCCceeecccCCCCC----CC------CCHHHHHHHHHHHHHH-HHHhh--cccccCCccchHH-H
Q psy9933 80 LNPTDVNVPVIGGHAGITIIPLISQATPS----VS------FPDDQLKALTGRIQEA-VSLKN--GIEKNLGLGKLSD-F 145 (208)
Q Consensus 80 v~~~~v~~~ViGeH~g~~~vp~~S~~~~~----~~------~~~~~~~~l~~~v~~~-~~~~~--~k~~~~g~~~~~~-~ 145 (208)
++|++|+++||||| |++++|+||++++. .+ +++++++++.++++++ +++.+ || |||+||+ +
T Consensus 167 v~~~~v~~~v~G~H-G~t~~p~~s~~~v~g~p~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~~gk----gsa~~~~a~ 241 (324)
T 3gvi_A 167 VSVEDVTVFVLGGH-GDSMVPLARYSTVAGIPLPDLVKMGWTSQDKLDKIIQRTRDGGAEIVGLLKT----GSAFYAPAA 241 (324)
T ss_dssp CCGGGEECCEEECS-GGGEEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHHHHSS----CCCCHHHHH
T ss_pred cCHHHCeEEEEcCC-CCceeeehhhCeECCEEHHHhhhccCCCHHHHHHHHHHHHHhHHHHHHhcCC----CcHHHHHHH
Confidence 99999999999999 89999999999732 12 4677899999999987 44433 77 9999999 9
Q ss_pred HHHHHHhhhc-CC---------------CCcEEEe----ecCCeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q psy9933 146 EKERQQFSPF-IK---------------TFASFFS----PQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKGEE 203 (208)
Q Consensus 146 a~~~~i~ai~-~~---------------~~~~~~s----ig~~Gv~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~~~~ 203 (208)
|+++++++|+ |. ..++||| +|++|+++++++ +||++|+++|++|++.|++.++....
T Consensus 242 a~~~~~~ail~~~~~v~~~s~~~~g~yg~~~v~~s~P~~~g~~Gv~~v~~l-~L~~~E~~~l~~s~~~l~~~~~~~~~ 318 (324)
T 3gvi_A 242 SAIQMAESYLKDKKRVLPVAAQLSGQYGVKDMYVGVPTVIGANGVERIIEI-DLDKDEKAQFDKSVASVAGLCEACIG 318 (324)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcEEEEEEEecCccCCCceEEEEEEEEeCCEEEEecCC-CCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999996 21 1268999 999999999999 89999999999999999999988764
No 12
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=100.00 E-value=2.1e-45 Score=322.97 Aligned_cols=193 Identities=21% Similarity=0.257 Sum_probs=168.7
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhCCCeE-EEEeCCCccccHHHHHHHHHHcCCCCCCCeEEeehhhHHHHHHHHHHHhC
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVAPKAL-IGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVTTLDIVRANTFVAEAKG 79 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~p~~i-iivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~~LDs~R~~~~la~~l~ 79 (208)
|+|+||+..|++|+++++++++++||+++ ++++|||+|+||| ++++.+|||++||+|.|.|||+||++++|+++|
T Consensus 92 ~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNPvd~~t~----i~~k~sg~p~~rv~g~t~LDs~R~~~~la~~l~ 167 (343)
T 3fi9_A 92 MTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPADITGL----VTLIYSGLKPSQVTTLAGLDSTRLQSELAKHFG 167 (343)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSSHHHHHH----HHHHHHTCCGGGEEEECCHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCchHHHHH----HHHHHcCCCcceEEEecCcHHHHHHHHHHHHhC
Confidence 68999999999999999999999999995 9999999999876 567778899999999888999999999999999
Q ss_pred CCCCccc-cceeccCCCCceeecccCCC----CCCC------CCHHHHHHHHHHHHHH-HHHhhcccccCCcc-chHH-H
Q psy9933 80 LNPTDVN-VPVIGGHAGITIIPLISQAT----PSVS------FPDDQLKALTGRIQEA-VSLKNGIEKNLGLG-KLSD-F 145 (208)
Q Consensus 80 v~~~~v~-~~ViGeH~g~~~vp~~S~~~----~~~~------~~~~~~~~l~~~v~~~-~~~~~~k~~~~g~~-~~~~-~ 145 (208)
++|++|+ +|||||| |++++|+||+++ |..+ ++++++++|.++|+++ +++.++| |++ ++|+ +
T Consensus 168 v~~~~v~~~~ViGeH-gds~vp~~S~a~v~G~pl~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~k----g~ss~~s~A~ 242 (343)
T 3fi9_A 168 IKQSLVTNTRTYGGH-GEQMAVFASTAKVNGTPLTDLIGTDKLTNEQWAELKQRVVKGGANIIKLR----GRSSFQSPSY 242 (343)
T ss_dssp SCGGGEECCCEEESS-GGGEEECGGGCEETTEEGGGTTTBTTBCHHHHHHHHHHHHTHHHHHHHHH----SSCCCHHHHH
T ss_pred cCHHHcccceEEEcC-CCceeeeeecceECCEEhhHhccccCCCHHHHHHHHHHHHhhhHHHHHcc----CCCcHHhHHH
Confidence 9999997 9999999 899999999996 3222 4778899999999998 7766666 644 5799 9
Q ss_pred HHHHHHhhhc-CC--------------CCcEEEe----ecCCeeEEeccCCC-CCHHHHHHHHHHHHHHHHHHHHHHH
Q psy9933 146 EKERQQFSPF-IK--------------TFASFFS----PQKNGIEKNLGLGK-LSDFEKELVKAAVPELKKNIAKGEE 203 (208)
Q Consensus 146 a~~~~i~ai~-~~--------------~~~~~~s----ig~~Gv~~i~~lp~-L~~~E~~~l~~sa~~l~~~i~~~~~ 203 (208)
|+++++++++ |. .+++||| +|++||+++ +++. |+++|+++|++|++.|++.++....
T Consensus 243 a~~~~~~ail~d~~~v~~~s~~~~g~~~~~v~~s~P~~lg~~Gv~~~-~~~~ll~~~E~~~l~~Sa~~l~~~~~~~~~ 319 (343)
T 3fi9_A 243 VSIEMIRAAMGGEAFRWPAGCYVNVPGFEHIMMAMETTITKDGVKHS-DINQLGNEAERAALKESYSHLAKLRDEVIA 319 (343)
T ss_dssp HHHHHHHHHTTSSCCCSCEEEEEEETTEEEEEEEESEEEETTEEEEC-CGGGSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCceEEEEEEEeCCCcCceEEEeEEEEeCCceEEE-ecCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999997 21 2468999 999999987 5523 8999999999999999999988765
No 13
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=100.00 E-value=2.5e-44 Score=314.05 Aligned_cols=201 Identities=50% Similarity=0.779 Sum_probs=186.2
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEeehhhHHHHHHHHHHHhCC
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVTTLDIVRANTFVAEAKGL 80 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~~LDs~R~~~~la~~l~v 80 (208)
|+|+|++..|+++++++++++.+++|+++++++|||+|++++++++.+|+.++||++||+|++.||++|+++++|+++|+
T Consensus 92 ~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SNPv~~~~~~~t~~~~~~~~~p~~rviG~~~Ld~~r~~~~la~~l~v 171 (326)
T 1smk_A 92 MTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTMLDVVRANTFVAEVLGL 171 (326)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHHHHHHTCCCTTSEEECCHHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCchHHHHHHHHHHHHHccCCCcccEEEEeehHHHHHHHHHHHHhCc
Confidence 57999999999999999999999999999999999999999999999999999999999999889999999999999999
Q ss_pred CCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH----HHHhhcccccCCccchHH-HHHHHHHhhh-
Q psy9933 81 NPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA----VSLKNGIEKNLGLGKLSD-FEKERQQFSP- 154 (208)
Q Consensus 81 ~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~----~~~~~~k~~~~g~~~~~~-~a~~~~i~ai- 154 (208)
+|++|+++|+|||+|++++|+||++.+..++++++++++.++++++ ++.+.|+ |+++||+ .|+++++++|
T Consensus 172 ~~~~v~~~v~G~H~G~~~~p~~s~~~v~~~~~~~~~~~~~~~v~~~g~eii~~k~~~----gs~~~~~a~a~~~~~~ai~ 247 (326)
T 1smk_A 172 DPRDVDVPVVGGHAGVTILPLLSQVKPPSSFTQEEISYLTDRIQNGGTEVVEAKAGA----GSATLSMAYAAVKFADACL 247 (326)
T ss_dssp CGGGCBCCEEECSSGGGEEECGGGCBSCCCCCHHHHHHHHHHHHHHHHHHHHHTTTS----CCCCHHHHHHHHHHHHHHH
T ss_pred ChhheEEEEecccCCceEEEecccCeecCcCCHHHHHHHHHHHHHHHHHHHhcccCC----CCcHHHHHHHHHHHHHHHH
Confidence 9999999999999989999999999876568888899999999987 3444467 8999999 9999999999
Q ss_pred --c-C-------------CCCcEEEe----ecCCeeEEecc-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy9933 155 --F-I-------------KTFASFFS----PQKNGIEKNLG-LGKLSDFEKELVKAAVPELKKNIAKGEEFVA 206 (208)
Q Consensus 155 --~-~-------------~~~~~~~s----ig~~Gv~~i~~-lp~L~~~E~~~l~~sa~~l~~~i~~~~~~~~ 206 (208)
+ | .++++||| +|++|++++++ + +|+++|+++|++|++.|++.++++.+|++
T Consensus 248 ~~~~~~~~v~~~~~~~g~~~~~~~~~vP~~ig~~Gv~~i~~~~-~L~~~e~~~l~~s~~~l~~~~~~~~~~~~ 319 (326)
T 1smk_A 248 RGLRGDAGVIECAFVSSQVTELPFFASKVRLGRNGIEEVYSLG-PLNEYERIGLEKAKKELAGSIEKGVSFIR 319 (326)
T ss_dssp HHHHTCSCEEEEEEEECCSSSSSEEEEEEEEETTEEEEECCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHhCCCCeEEEEEeeccccCCceEEEEEEEEeCCeeEEEcCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 2 24678999 99999999999 7 89999999999999999999999999875
No 14
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=100.00 E-value=4e-44 Score=312.00 Aligned_cols=195 Identities=22% Similarity=0.242 Sum_probs=173.6
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEee-hhhHHHHHHHHHHHhC
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVT-TLDIVRANTFVAEAKG 79 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~-~LDs~R~~~~la~~l~ 79 (208)
|+|+|++..|++|++++++.+.++||+|+++++|||+|++| +++++.+|||++||||+| .||++|+++++|+++|
T Consensus 88 ~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t----~~~~k~s~~p~~rviG~gt~LD~~R~~~~la~~lg 163 (318)
T 1ez4_A 88 ESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPVDILT----YATWKFSGFPKERVIGSGTSLDSSRLRVALGKQFN 163 (318)
T ss_dssp -----CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHH----HHHHHHHCCCGGGEEECTTHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcHHHHH----HHHHHHcCCCHHHEEeccccchHHHHHHHHHHHhC
Confidence 68999999999999999999999999999999999999975 578888999999999995 6999999999999999
Q ss_pred CCCCccccceeccCCCCceeecccCCCCC----C------CCCHHHHHHHHHHHHHH-HHHhhcccccCCccchHH-HHH
Q psy9933 80 LNPTDVNVPVIGGHAGITIIPLISQATPS----V------SFPDDQLKALTGRIQEA-VSLKNGIEKNLGLGKLSD-FEK 147 (208)
Q Consensus 80 v~~~~v~~~ViGeH~g~~~vp~~S~~~~~----~------~~~~~~~~~l~~~v~~~-~~~~~~k~~~~g~~~~~~-~a~ 147 (208)
++|++|+++|+||| |++++|+||++++. . .+++++++++.++++++ +++..+| |+++|++ .|+
T Consensus 164 v~~~~v~~~v~G~H-G~t~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~k----g~t~~~~a~a~ 238 (318)
T 1ez4_A 164 VDPRSVDAYIMGEH-GDSEFAAYSTATIGTRPVRDVAKEQGVSDDDLAKLEDGVRNKAYDIINLK----GATFYGIGTAL 238 (318)
T ss_dssp CCGGGEECCEESSS-SSSCEECGGGCEETTEEHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHH----SCCCHHHHHHH
T ss_pred cChhHEEEEEeccc-CCceEEEehhhcCCCeeHHHHhhccCCCHHHHHHHHHHHHHhhhhheeCC----CcchHHHHHHH
Confidence 99999999999999 99999999998742 1 26677789999999998 7777788 9999999 999
Q ss_pred HHHHhhhc-C----------------CCCcEEEe----ecCCeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy9933 148 ERQQFSPF-I----------------KTFASFFS----PQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKGEEFVA 206 (208)
Q Consensus 148 ~~~i~ai~-~----------------~~~~~~~s----ig~~Gv~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~~~~~~~ 206 (208)
++++++|+ | .+ ++||| +|++|+++++++ +|+++|+++|++|++.|++.++++.+++.
T Consensus 239 ~~~~~ai~~~~~~~~~vs~~~~G~yg~~-~~~~~vP~~ig~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~~~~~~~~~~~~ 316 (318)
T 1ez4_A 239 MRISKAILRDENAVLPVGAYMDGQYGLN-DIYIGTPAIIGGTGLKQIIES-PLSADELKKMQDSAATLKKVLNDGLAELE 316 (318)
T ss_dssp HHHHHHHHTTCCEEEEEEEEEESGGGCE-EEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCcEEEEEEeecCccCCC-ceEEEEEEEEeCCeeEEEcCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999996 1 13 78999 999999999998 89999999999999999999999988774
No 15
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=100.00 E-value=5e-44 Score=312.35 Aligned_cols=195 Identities=23% Similarity=0.290 Sum_probs=174.2
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEee-hhhHHHHHHHHHHHhC
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVT-TLDIVRANTFVAEAKG 79 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~-~LDs~R~~~~la~~l~ 79 (208)
|+|+|++..|++|++++++.+.++||+|+++++|||+|+++ +++++.+|||++||||+| .||++|+++++|+++|
T Consensus 92 ~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t----~~~~k~s~~p~~rviG~gt~LD~~R~~~~la~~lg 167 (326)
T 2zqz_A 92 ETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVDILT----YATWKLSGFPKNRVVGSGTSLDTARFRQSIAEMVN 167 (326)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSHHHHH----HHHHHHHCCCGGGEEECTTHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHH----HHHHHHcCCCHHHEEEccccchHHHHHHHHHHHhC
Confidence 68999999999999999999999999999999999999975 578888899999999995 6999999999999999
Q ss_pred CCCCccccceeccCCCCceeecccCCCCC-----------CCCCHHHHHHHHHHHHHH-HHHhhcccccCCccchHH-HH
Q psy9933 80 LNPTDVNVPVIGGHAGITIIPLISQATPS-----------VSFPDDQLKALTGRIQEA-VSLKNGIEKNLGLGKLSD-FE 146 (208)
Q Consensus 80 v~~~~v~~~ViGeH~g~~~vp~~S~~~~~-----------~~~~~~~~~~l~~~v~~~-~~~~~~k~~~~g~~~~~~-~a 146 (208)
++|++|+++|+||| |++++|+||++++. ..+++++++++.++++++ +++..+| |+++|++ .|
T Consensus 168 v~~~~v~~~v~G~H-G~t~~p~~s~~~v~g~~~~e~~~~~~~~~~~~~~~i~~~v~~~g~eii~~k----G~t~~~~a~a 242 (326)
T 2zqz_A 168 VDARSVHAYIMGEH-GDTEFPVWSHANIGGVTIAEWVKAHPEIKEDKLVKMFEDVRDAAYEIIKLK----GATFYGIATA 242 (326)
T ss_dssp CCGGGEECCEEBSS-STTCEECGGGCEETTEEHHHHHHHCTTSCHHHHHHHHHHHHTHHHHHHHHH----SCCCHHHHHH
T ss_pred CChhheEEEEeccc-CCceEeehhhceECCEEHHHhhcccccCCHHHHHHHHHHHHHhHHHHHHcC----CCcHHHHHHH
Confidence 99999999999999 99999999998732 125667788999999988 7777788 9999999 99
Q ss_pred HHHHHhhhc-C----------------CCCcEEEe----ecCCeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy9933 147 KERQQFSPF-I----------------KTFASFFS----PQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKGEEFV 205 (208)
Q Consensus 147 ~~~~i~ai~-~----------------~~~~~~~s----ig~~Gv~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~~~~~~ 205 (208)
+++++++|+ | .+ ++||| +|++|+++++++ +|+++|+++|++|++.|++.++++.+++
T Consensus 243 a~~~~~ai~~~~~~~~~vsv~~~G~yg~~-~~~~svP~~ig~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~~~~~~~~~~~ 320 (326)
T 2zqz_A 243 LARISKAILNDENAVLPLSVYMDGQYGLN-DIYIGTPAVINRNGIQNILEI-PLTDHEEESMQKSASQLKKVLTDAFAKN 320 (326)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEEESGGGCE-EEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHhCCCcEEEEEEeccCccCCC-ceEEEEEEEEcCCeeEEEecC-CCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999996 1 13 78999 999999999998 8999999999999999999999998877
Q ss_pred h
Q psy9933 206 A 206 (208)
Q Consensus 206 ~ 206 (208)
.
T Consensus 321 ~ 321 (326)
T 2zqz_A 321 D 321 (326)
T ss_dssp -
T ss_pred h
Confidence 4
No 16
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=100.00 E-value=4.7e-44 Score=316.82 Aligned_cols=195 Identities=21% Similarity=0.166 Sum_probs=165.2
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHh-CCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEee-hhhHHHHHHHHHHHh
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEV-APKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVT-TLDIVRANTFVAEAK 78 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~-~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~-~LDs~R~~~~la~~l 78 (208)
|+|+||+..|++||++++++|+++ +|+++++|+|||+|+||| ++|+.++++++|+||++ +|||+||+++||+++
T Consensus 124 ~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPvD~~t~----ia~k~sg~~~~rvig~gT~LDsaR~r~~lA~~l 199 (375)
T 7mdh_A 124 MERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPCNTNAL----ICLKNAPDIPAKNFHALTRLDENRAKCQLALKA 199 (375)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHH----HHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCchhHHHH----HHHHHcCCCCccEEEeeehHHHHHHHHHHHHHh
Confidence 799999999999999999999998 899999999999999865 56787777778999996 699999999999999
Q ss_pred CCCCCcccc-ceeccCCCCceeecccCCC----CCCCCC-HHH--HHHHHHHHHHH-HHHhhcccccCCccchHHHHHHH
Q psy9933 79 GLNPTDVNV-PVIGGHAGITIIPLISQAT----PSVSFP-DDQ--LKALTGRIQEA-VSLKNGIEKNLGLGKLSDFEKER 149 (208)
Q Consensus 79 ~v~~~~v~~-~ViGeH~g~~~vp~~S~~~----~~~~~~-~~~--~~~l~~~v~~~-~~~~~~k~~~~g~~~~~~~a~~~ 149 (208)
|++|++|++ |||||| |+|++|+||+++ |..++. +++ .+++.++++++ +++.++| |++.++ +++++
T Consensus 200 gv~~~~V~~v~V~GeH-gdt~vp~~S~a~V~G~pl~~~~~~~~~~~~~i~~~v~~~g~eII~~k----G~ts~a-~aa~~ 273 (375)
T 7mdh_A 200 GVFYDKVSNVTIWGNH-STTQVPDFLNAKIDGRPVKEVIKRTKWLEEEFTITVQKRGGALIQKW----GRSSAA-STAVS 273 (375)
T ss_dssp TSCGGGEECCEEEBCS-STTCEEECSSCEETTEEGGGTCCCHHHHHHHHHHHHHTHHHHHHHHT----SSCCHH-HHHHH
T ss_pred CcChhhcccceEEecC-CCceeeeeecccCCCEEhhHhccchhhHHHHHHHHHHHHHHHHHHhc----CCCchH-HHHHH
Confidence 999999995 899999 899999999998 433442 233 47899999988 7766667 777665 55556
Q ss_pred HHhhhc-------------------C--C--CCcEEEe----ecCCeeEEecc-CCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9933 150 QQFSPF-------------------I--K--TFASFFS----PQKNGIEKNLG-LGKLSDFEKELVKAAVPELKKNIAKG 201 (208)
Q Consensus 150 ~i~ai~-------------------~--~--~~~~~~s----ig~~Gv~~i~~-lp~L~~~E~~~l~~sa~~l~~~i~~~ 201 (208)
++++|+ + + ++++||| +|++|++++++ + +|+++|+++|++|++.|+++.+.+
T Consensus 274 i~~~i~~~l~g~d~~~v~~vs~~~~G~~YGi~~dv~~s~P~vlg~~Gv~~iv~~l-~L~~~E~~~l~~Sa~~L~~e~~~~ 352 (375)
T 7mdh_A 274 IADAIKSLVTPTPEGDWFSTGVYTTGNPYGIAEDIVFSMPCRSKGDGDYELATDV-SNDDFLWERIKKSEAELLAEKKCV 352 (375)
T ss_dssp HHHHHHHHHSCCCTTCCEEEEEECTTCSSCCCSSSEEEEEEECCSSSCCEECCCC-CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCCCeEEEEEEEeCCccCCCCCceEEEEEEEEcCCeeEEecCCC-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 665552 1 1 2578999 99999999995 8 899999999999999999999988
Q ss_pred HHHHh
Q psy9933 202 EEFVA 206 (208)
Q Consensus 202 ~~~~~ 206 (208)
..++.
T Consensus 353 ~~~~~ 357 (375)
T 7mdh_A 353 AHLTG 357 (375)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 77763
No 17
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=100.00 E-value=1.1e-43 Score=308.00 Aligned_cols=196 Identities=22% Similarity=0.286 Sum_probs=176.9
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEee-hhhHHHHHHHHHHHhC
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVT-TLDIVRANTFVAEAKG 79 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~-~LDs~R~~~~la~~l~ 79 (208)
|+|+|++..|++|++++++++.++||++++|++|||+|+++ +++++.+|||++||+|+| .||++|+++++|+++|
T Consensus 83 ~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t----~~~~k~~~~p~~rviG~gt~LD~~R~~~~la~~lg 158 (308)
T 2d4a_B 83 MTREQLLEANANTMADLAEKIKAYAKDAIVVITTNPVDAMT----YVMYKKTGFPRERVIGFSGILDSARMAYYISQKLG 158 (308)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHH----HHHHHHHCCCGGGEEECCHHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCchHHHH----HHHHHhcCCChhhEEEecccchHHHHHHHHHHHhC
Confidence 68999999999999999999999999999999999999985 467888999999999995 6999999999999999
Q ss_pred CCCCccccceeccCCCCceeecccCCCCC----CC-CCHHHHHHHHHHHHHH-HHHhhcccccCC-ccchHH-HHHHHHH
Q psy9933 80 LNPTDVNVPVIGGHAGITIIPLISQATPS----VS-FPDDQLKALTGRIQEA-VSLKNGIEKNLG-LGKLSD-FEKERQQ 151 (208)
Q Consensus 80 v~~~~v~~~ViGeH~g~~~vp~~S~~~~~----~~-~~~~~~~~l~~~v~~~-~~~~~~k~~~~g-~~~~~~-~a~~~~i 151 (208)
++|++|+++||||| |++++|+||++++. .+ +++++++++.++++++ +++..+| | +++|++ .|+++++
T Consensus 159 v~~~~v~~~v~G~H-g~t~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~v~~~g~eii~~k----g~s~~~~~a~a~~~~~ 233 (308)
T 2d4a_B 159 VSFKSVNAIVLGMH-GQKMFPVPRLSSVGGVPLEHLMSKEEIEEVVSETVNAGAKITELR----GYSSNYGPAAGLVLTV 233 (308)
T ss_dssp SCGGGEECCEEBCS-STTCEECGGGCEETTEEHHHHSCHHHHHHHHHHHHTHHHHHHHHH----SSCCCHHHHHHHHHHH
T ss_pred cChhHeEEEEEecc-CCceeeeehhccCCCEEHHHHcCHHHHHHHHHHHHHhhHhhhhCC----CCccHHHHHHHHHHHH
Confidence 99999999999999 89999999998742 22 5777899999999987 7777778 9 999999 9999999
Q ss_pred hhhc-CC---------------CCcEEEe----ecCCeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy9933 152 FSPF-IK---------------TFASFFS----PQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKGEEFVA 206 (208)
Q Consensus 152 ~ai~-~~---------------~~~~~~s----ig~~Gv~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~~~~~~~ 206 (208)
++|+ |. -+++||| +|++|+++++++ +|+++|+++|++|++.|++.++++.+.|.
T Consensus 234 ~ai~~~~~~v~~vs~~~~G~yg~~~~~~~vP~~ig~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~~~~~~~~~~l~ 307 (308)
T 2d4a_B 234 EAIKRDSKRIYPYSLYLQGEYGYNDIVAEVPAVIGKSGIERIIEL-PLTEDEKRKFDEAVQAVKKLVETLPPQLR 307 (308)
T ss_dssp HHHHTTCCEEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHTSCHHHH
T ss_pred HHHHhCCCcEEEEEEEEcCccCCCceEEEEEEEEcCCceEEecCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9996 11 1478999 999999999998 89999999999999999999998876653
No 18
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=100.00 E-value=1.8e-45 Score=321.54 Aligned_cols=180 Identities=19% Similarity=0.162 Sum_probs=164.0
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEee-hhhHHHHHHHHHHHhC
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVT-TLDIVRANTFVAEAKG 79 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~-~LDs~R~~~~la~~l~ 79 (208)
|+|+||+..|++|++++++++.+++|+++++++|||+|++++ ++++.+|||++||||++ .||++||++++|+++|
T Consensus 105 ~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNPvdi~t~----~~~k~sg~p~~rViG~gt~LDs~R~~~~lA~~lg 180 (330)
T 3ldh_A 105 ESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPELGTDKNK----QDWKLSGLPMHRIIGSGCNLDSARFRYLMGERLG 180 (330)
T ss_dssp CCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHH----HHHHHHCCCGGGEECCTTHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCccHHHHH----HHHHHhCCCHHHeecccCchhHHHHHHHHHHHhC
Confidence 799999999999999999999999999999999999999865 67788899999999995 6999999999999999
Q ss_pred CCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH-HHHhhcccccCCccchHH-H------------
Q psy9933 80 LNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA-VSLKNGIEKNLGLGKLSD-F------------ 145 (208)
Q Consensus 80 v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~-~~~~~~k~~~~g~~~~~~-~------------ 145 (208)
++|++|++|||||| |++++|+||+ ++ .+++.++++++ +++.++| |+|+||+ +
T Consensus 181 v~~~~V~~~V~G~H-g~t~vp~~S~-----~~----~~~~~~~v~~~g~eii~~k----g~t~~a~a~~~~~~~~~~~~~ 246 (330)
T 3ldh_A 181 VHSCLVIGWVIGQH-GDSVPSVWSG-----MW----DAKLHKDVVDSAYEVIKLK----GYTSWAIGLVVSNPVDVLTYV 246 (330)
T ss_dssp SCTTTCCEEECSSS-STTCCEEEEE-----EE----ETTEEHHHHHCCCTTSTTC----HHHHHHHHHTTHHHHTTSSSC
T ss_pred CCHHHeEEEEEcCC-CCceeeechh-----hH----HHHHHHHHHHHHHHHHHcc----CCcceeeeeeccCccchhhhh
Confidence 99999999999999 8999999999 12 26788999998 7777778 9999999 9
Q ss_pred -----HHHHHHhhhc-C----------------CCCcEEEe----ecCCeeEE--eccCCCCCHHHHHHHHHHHHHHHHH
Q psy9933 146 -----EKERQQFSPF-I----------------KTFASFFS----PQKNGIEK--NLGLGKLSDFEKELVKAAVPELKKN 197 (208)
Q Consensus 146 -----a~~~~i~ai~-~----------------~~~~~~~s----ig~~Gv~~--i~~lp~L~~~E~~~l~~sa~~l~~~ 197 (208)
|+++++++|+ | .++++||| +| +||++ ++++ +|+++|+++|++|++.|++.
T Consensus 247 ~~~~~a~~~~~~ail~~~~~v~~~s~~~~g~yg~~~~v~~s~P~~lg-~Gv~~~~iv~~-~L~~~E~~~l~~s~~~l~~~ 324 (330)
T 3ldh_A 247 AWKGCSVADLAQTIMKDLCRVHPVSTMVKDFYGIKDNVFLSLPCVLN-NGISHCNIVKM-KLKPDEEQQLQKSATTLWDI 324 (330)
T ss_dssp SCTHHHHHHHHHHHHHTCCEEECCBCCCSSSSSCCSCCCCBCCEEEB-TTBCTTCCCCC-CCCHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCCceEEEEeecCCccCCCCceEEEEEEEEC-CcEEEcceecC-CCCHHHHHHHHHHHHHHHHH
Confidence 9999999996 1 13478999 99 99999 9998 89999999999999999998
Q ss_pred HHH
Q psy9933 198 IAK 200 (208)
Q Consensus 198 i~~ 200 (208)
++.
T Consensus 325 ~~~ 327 (330)
T 3ldh_A 325 QKD 327 (330)
T ss_dssp HHT
T ss_pred HHH
Confidence 774
No 19
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=100.00 E-value=2.7e-43 Score=305.72 Aligned_cols=191 Identities=21% Similarity=0.262 Sum_probs=172.6
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEee-hhhHHHHHHHHHHHhC
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVT-TLDIVRANTFVAEAKG 79 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~-~LDs~R~~~~la~~l~ 79 (208)
|+|+|++..|++|++++++.++++||+++++++|||+|+++ +++++.+|||++||||+| .||++|+++++|+++|
T Consensus 83 ~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t----~~~~k~s~~p~~rviG~gt~LD~~R~~~~la~~lg 158 (310)
T 2xxj_A 83 ETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPVDVMT----QVAYALSGLPPGRVVGSGTILDTARFRALLAEYLR 158 (310)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHH----HHHHHHHTCCGGGEEECTTHHHHHHHHHHHHHHHT
T ss_pred cCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecCchHHHH----HHHHHHcCCCHHHEEecCcchhHHHHHHHHHHHhC
Confidence 68999999999999999999999999999999999999986 467888899999999995 6999999999999999
Q ss_pred CCCCccccceeccCCCCceeecccCCCCC----CC--------CCHHHHHHHHHHHHHH-HHHhhcccccCCccchHH-H
Q psy9933 80 LNPTDVNVPVIGGHAGITIIPLISQATPS----VS--------FPDDQLKALTGRIQEA-VSLKNGIEKNLGLGKLSD-F 145 (208)
Q Consensus 80 v~~~~v~~~ViGeH~g~~~vp~~S~~~~~----~~--------~~~~~~~~l~~~v~~~-~~~~~~k~~~~g~~~~~~-~ 145 (208)
++|++|++||+||| |++++|+||++++. .+ +++++++++.++++++ +++..+| |+++|++ .
T Consensus 159 v~~~~v~~~v~G~H-G~t~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~k----g~t~~~~a~ 233 (310)
T 2xxj_A 159 VAPQSVHAYVLGEH-GDSEVLVWSSAQVGGVPLLEFAEARGRALSPEDRARIDEGVRRAAYRIIEGK----GATYYGIGA 233 (310)
T ss_dssp SCGGGEEEEEEBCS-STTCEEEEEEEEETTEEHHHHHHHTTCCCCHHHHHHHHHHHHTHHHHHHHHH----SCCCHHHHH
T ss_pred cCHHHeEEEEeccc-CCccccchhhccCCCEEHHHHhhhcccCCCHHHHHHHHHHHHHhhHHHHhcc----CCcHHHHHH
Confidence 99999999999999 99999999998632 11 4677789999999988 7777788 9999999 9
Q ss_pred HHHHHHhhhc-CC--------------C-CcEEEe----ecCCeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9933 146 EKERQQFSPF-IK--------------T-FASFFS----PQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKG 201 (208)
Q Consensus 146 a~~~~i~ai~-~~--------------~-~~~~~s----ig~~Gv~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~~ 201 (208)
|+++++++|+ |. . +++||| +|++|+++++++ +|+++|+++|++|++.|++.+++.
T Consensus 234 a~~~~~~ai~~~~~~~~~vs~~~~G~yg~~~~~~~vP~~ig~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~~~~~~~ 308 (310)
T 2xxj_A 234 GLARLVRAILTDEKGVYTVSAFTPEVAGVLEVSLSLPRILGAGGVAGTVYP-SLSPEERAALRRSAEILKEAAFAL 308 (310)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEEEEEETTEEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCEEEEEEEEcCccCCccEEEEEEEEEeCCeeEEEcCC-CCCHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999996 21 1 458898 999999999998 899999999999999999998865
No 20
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=100.00 E-value=1.5e-42 Score=299.91 Aligned_cols=191 Identities=24% Similarity=0.276 Sum_probs=173.7
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEee-hhhHHHHHHHHHHHhC
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVT-TLDIVRANTFVAEAKG 79 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~-~LDs~R~~~~la~~l~ 79 (208)
|+|+|++..|+++++++++++.+++|+++++++|||+|+++ +++++.+|||++||+|+| .||++|+++++|+++|
T Consensus 86 ~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv~~~~----~~~~~~~~~p~~rviG~gt~Ld~~r~~~~la~~l~ 161 (303)
T 1o6z_A 86 QTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPVDLLN----RHLYEAGDRSREQVIGFGGRLDSARFRYVLSEEFD 161 (303)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSHHHHH----HHHHHHSSSCGGGEEECCHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChHHHHH----HHHHHHcCCCHHHeeecccchhHHHHHHHHHHHhC
Confidence 68999999999999999999999999999999999999975 578899999999999995 6999999999999999
Q ss_pred CCCCccccceeccCCCCceeecccCCCCC--CCC-CHHHHHHHHHHHHHH-HHHhhcccccCCccchHH-HHHHHHHhhh
Q psy9933 80 LNPTDVNVPVIGGHAGITIIPLISQATPS--VSF-PDDQLKALTGRIQEA-VSLKNGIEKNLGLGKLSD-FEKERQQFSP 154 (208)
Q Consensus 80 v~~~~v~~~ViGeH~g~~~vp~~S~~~~~--~~~-~~~~~~~l~~~v~~~-~~~~~~k~~~~g~~~~~~-~a~~~~i~ai 154 (208)
++|++|+++||||| |++++|+||++.+. .++ ++++++++.++++++ +++..+| |+++||+ .|+++++++|
T Consensus 162 v~~~~v~~~v~G~H-G~~~~p~~s~~~v~g~p~~~~~~~~~~~~~~v~~~g~eii~~k----g~~~~~~a~a~~~~~~ai 236 (303)
T 1o6z_A 162 APVQNVEGTILGEH-GDAQVPVFSKVSVDGTDPEFSGDEKEQLLGDLQESAMDVIERK----GATEWGPARGVAHMVEAI 236 (303)
T ss_dssp CCGGGEECCEEECS-STTEEECGGGCEETTBCCCCCHHHHHHHHHHHHHHHHHHHTTT----SSCCHHHHHHHHHHHHHH
T ss_pred cCHHHeEEEEEeCC-CCccccCCcccccCCcCccCCHHHHHHHHHHHHHHhHHHHhcC----CChHHHHHHHHHHHHHHH
Confidence 99999999999999 99999999998621 055 788899999999988 8877788 9999999 9999999999
Q ss_pred c-CC---------------CCcEEEe----ecCCeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9933 155 F-IK---------------TFASFFS----PQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKG 201 (208)
Q Consensus 155 ~-~~---------------~~~~~~s----ig~~Gv~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~~ 201 (208)
+ |. -+++||| +|++|+++++++ +|+++|+++|++|++.|++.+++.
T Consensus 237 ~~~~~~~~~~~~~~~g~~g~~~~~~~~P~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~~ 302 (303)
T 1o6z_A 237 LHDTGEVLPASVKLEGEFGHEDTAFGVPVSLGSNGVEEIVEW-DLDDYEQDLMADAAEKLSDQYDKI 302 (303)
T ss_dssp HTTCCCEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhCCCCEEEEEEecCCccCCcceEEEEEEEEeCCeeEEecCC-CCCHHHHHHHHHHHHHHHHHHHhh
Confidence 6 11 1468999 999999999998 899999999999999999998764
No 21
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=100.00 E-value=7.9e-43 Score=303.53 Aligned_cols=191 Identities=23% Similarity=0.286 Sum_probs=172.0
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEee-hhhHHHHHHHHHHHhC
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVT-TLDIVRANTFVAEAKG 79 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~-~LDs~R~~~~la~~l~ 79 (208)
|+|+|++..|++|++++++.+.++||+++++++|||+|++| +++++.+|||++||||+| .||++|+++++|+++|
T Consensus 90 ~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t----~~~~k~~~~p~~rviG~gt~lD~~r~~~~la~~l~ 165 (317)
T 3d0o_A 90 ETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPVDILA----YATWKFSGLPKERVIGSGTILDSARFRLLLSEAFD 165 (317)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHH----HHHHHHHCCCGGGEEECTTHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCcHHHHH----HHHHHHhCCCHHHEEecCccccHHHHHHHHHHHhC
Confidence 68999999999999999999999999999999999999975 578888999999999995 6999999999999999
Q ss_pred CCCCccccceeccCCCCceeecccCCCCCC----------CCCHHHHHHHHHHHHHH-HHHhhcccccCCccchHH-HHH
Q psy9933 80 LNPTDVNVPVIGGHAGITIIPLISQATPSV----------SFPDDQLKALTGRIQEA-VSLKNGIEKNLGLGKLSD-FEK 147 (208)
Q Consensus 80 v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~----------~~~~~~~~~l~~~v~~~-~~~~~~k~~~~g~~~~~~-~a~ 147 (208)
++|++|+++|+||| |++++|+||++++.. .+++++++++.++++++ +++..+| |+++|++ .|+
T Consensus 166 v~~~~v~~~v~G~H-G~t~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~k----g~~~~~~a~a~ 240 (317)
T 3d0o_A 166 VAPRSVDAQIIGEH-GDTELPVWSHANIAGQPLKTLLEQRPEGKAQIEQIFVQTRDAAYDIIQAK----GATYYGVAMGL 240 (317)
T ss_dssp SCGGGCBCCEEBCS-STTCEECTTTCEETTEEHHHHHHTSTTHHHHHHHHHHHHHTHHHHHHHHH----SCCCHHHHHHH
T ss_pred cChhhEEEEEEecC-CCCeeEeeeccccCCEEHHHHhhccCCCHHHHHHHHHHHHhhhhEEEeCC----CCchHhHHHHH
Confidence 99999999999999 999999999987421 24566788999999988 7777788 9999999 999
Q ss_pred HHHHhhhc-C----------------CCCcEEEe----ecCCeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy9933 148 ERQQFSPF-I----------------KTFASFFS----PQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKGE 202 (208)
Q Consensus 148 ~~~i~ai~-~----------------~~~~~~~s----ig~~Gv~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~~~ 202 (208)
++++++|+ | .+ ++||| +|++|+++++++ +|+++|+++|++|++.|++.+++..
T Consensus 241 ~~~~~ai~~~~~~~~~~~~~~~g~~g~~-~~~~~vP~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~~~ 314 (317)
T 3d0o_A 241 ARITEAIFRNEDAVLTVSALLEGEYEEE-DVYIGVPAVINRNGIRNVVEI-PLNDEEQSKFAHSAKTLKDIMAEAE 314 (317)
T ss_dssp HHHHHHHHTTCCEEEEEEEEEESGGGCE-EEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHcCCCcEEEEEEeecCccCCC-ceEEEEEEEEeCCeeEEEecC-CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999996 1 13 78999 999999999998 8999999999999999999998664
No 22
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=100.00 E-value=3.1e-42 Score=299.95 Aligned_cols=192 Identities=19% Similarity=0.266 Sum_probs=170.0
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEee-hhhHHHHHHHHHHHhC
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVT-TLDIVRANTFVAEAKG 79 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~-~LDs~R~~~~la~~l~ 79 (208)
|+|+|++..|++|++++++.+.+++|+++++++|||+|+++ +++++.+|||++||||+| .||++|+++++|+++|
T Consensus 90 ~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv~~~~----~~~~k~s~~p~~rviG~gt~Ld~~r~~~~la~~lg 165 (318)
T 1y6j_A 90 ETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVDIIT----YMIQKWSGLPVGKVIGSGTVLDSIRFRYLLSEKLG 165 (318)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSHHHHH----HHHHHHHTCCTTTEEECTTHHHHHHHHHHHHTTTT
T ss_pred cCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcHHHHH----HHHHHHcCCCHHHEeccCCchHHHHHHHHHHHHhC
Confidence 58999999999999999999999999999999999999985 467888899999999995 6999999999999999
Q ss_pred CCCCccccceeccCCCCceeecccCCCC----CCCC--------CHHHHHHHHHHHHHH-HHHhhcccccCCccchHH-H
Q psy9933 80 LNPTDVNVPVIGGHAGITIIPLISQATP----SVSF--------PDDQLKALTGRIQEA-VSLKNGIEKNLGLGKLSD-F 145 (208)
Q Consensus 80 v~~~~v~~~ViGeH~g~~~vp~~S~~~~----~~~~--------~~~~~~~l~~~v~~~-~~~~~~k~~~~g~~~~~~-~ 145 (208)
++|++|++||+||| |++++|+||++++ ..++ ++++++++.++++++ +++..+| |+++|++ .
T Consensus 166 v~~~~v~~~v~G~H-G~t~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~k----g~t~~~~a~ 240 (318)
T 1y6j_A 166 VDVKNVHGYIIGEH-GDSQLPLWSCTHIAGKNINEYIDDPKCNFTEEDKKKIAEDVKTAGATIIKNK----GATYYGIAV 240 (318)
T ss_dssp CCTTTEECCEEBCS-SSSCEECCTTCEETTBCSCCC-----------CCHHHHHHHHHHHHHHHHHT----SCCCHHHHH
T ss_pred CCHHHeEEEEeccc-CCcEeeeehhceECCEEHHHHhhhhcccCCHHHHHHHHHHHHHhhHhHhhCC----CccHHHHHH
Confidence 99999999999999 9999999999863 3233 344578999999988 7777788 9999999 9
Q ss_pred HHHHHHhhhc-C--------------C-CCcEEEe----ecCCeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy9933 146 EKERQQFSPF-I--------------K-TFASFFS----PQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKGE 202 (208)
Q Consensus 146 a~~~~i~ai~-~--------------~-~~~~~~s----ig~~Gv~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~~~ 202 (208)
|+++++++|+ | + -+++||| +|++|+++++++ +|+++|+++|++|++.|++.++++.
T Consensus 241 a~~~~~~ai~~~~~~~~~~~~~~~G~yg~~~~~~~vP~~ig~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~~~~~~~~ 316 (318)
T 1y6j_A 241 SINTIVETLLKNQNTIRTVGTVINGMYGIEDVAISLPSIVNSEGVQEVLQF-NLTPEEEEALRFSAEQVKKVLNEVK 316 (318)
T ss_dssp HHHHHHHHHHHTCCCEECCEEEECSBTTBCSEEEECCEEEETTEEEECCCC-CCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHcCCCcEEEEEEeecCccCCcceEEEEEEEEcCCeeEEEecC-CCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999996 1 0 1468999 999999999998 8999999999999999999988653
No 23
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=100.00 E-value=3.3e-42 Score=298.17 Aligned_cols=186 Identities=17% Similarity=0.163 Sum_probs=166.1
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEee-hhhHHHHHHHHHHHhC
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVT-TLDIVRANTFVAEAKG 79 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~-~LDs~R~~~~la~~l~ 79 (208)
|+|+||+..|++|++++++++.++||+++++++|||+|++ ++++++.+|||++||+|+| .||++|+++++|+++|
T Consensus 92 ~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sNP~~~~----t~~~~~~~~~p~~rviG~gt~Ld~~R~~~~la~~lg 167 (303)
T 2i6t_A 92 QSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVEIM----TYVTWKLSTFPANRVIGIGCNLDSQRLQYIITNVLK 167 (303)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSSHHHH----HHHHHHHHCCCGGGEEECTTHHHHHHHHHHHHHTSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCChHHHH----HHHHHHhcCCCHHHeeCCCCCchHHHHHHHHHHHcC
Confidence 7999999999999999999999999999999999999987 4678888999999999995 7999999999999999
Q ss_pred CCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH-HHHhhcccccCCccchHH-HHHHHHHhhhc-C
Q psy9933 80 LNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA-VSLKNGIEKNLGLGKLSD-FEKERQQFSPF-I 156 (208)
Q Consensus 80 v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~-~~~~~~k~~~~g~~~~~~-~a~~~~i~ai~-~ 156 (208)
++|++|+++|+||| |++++|+||+..+ +. .+++.++++++ +++..+| |+++||+ .|+++++++|+ |
T Consensus 168 v~~~~v~~~v~G~H-g~s~~p~~s~~~~---~~---~~~~~~~~~~~g~eii~~k----Gst~~~~a~a~~~i~~ai~~~ 236 (303)
T 2i6t_A 168 AQTSGKEVWVIGEQ-GEDKVLTWSGQEE---VV---SHTSQVQLSNRAMELLRVK----GQRSWSVGLSVADMVDSIVNN 236 (303)
T ss_dssp CTTGGGGEEEEBSC-SSSCEEEEBCSSC---CC---CHHHHHHHHHHHHTTSSSC----CCCHHHHHHHHHHHHHHHHTT
T ss_pred CChHHeEEEEecCC-CCCcccccccccc---cc---HHHHHHHHHHHHHHHHHcc----CchHHhHHHHHHHHHHHHHcC
Confidence 99999999999999 8999999999632 21 24577778877 7777788 9999999 99999999995 1
Q ss_pred ----------------CCCcEEEe----ecCCeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9933 157 ----------------KTFASFFS----PQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKG 201 (208)
Q Consensus 157 ----------------~~~~~~~s----ig~~Gv~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~~ 201 (208)
.++++||| +|++|+++++++++|+++|+++|++|++.|++.+++.
T Consensus 237 ~~~~~~vs~~~~g~yg~~~~~~~~vP~~ig~~Gv~~i~~~~~l~~~e~~~l~~s~~~l~~~~~~~ 301 (303)
T 2i6t_A 237 KKKVHSVSALAKGYYDINSEVFLSLPCILGTNGVSEVIKTTLKEDTVTEKLQSSASSIHSLQQQL 301 (303)
T ss_dssp CCEEEEEEEECTTSTTCCSCCEEEEEEEEETTEEEEECCBCC-CCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCcEEEEEEEeCCccCCCCCeEEEEEEEEECCccEEecCCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 24688999 9999999999886799999999999999999988753
No 24
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=100.00 E-value=6.3e-42 Score=299.85 Aligned_cols=197 Identities=22% Similarity=0.243 Sum_probs=164.3
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhCCCe-EEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEee-hhhHHHHHHHHHHHh
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVAPKA-LIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVT-TLDIVRANTFVAEAK 78 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~p~~-iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~-~LDs~R~~~~la~~l 78 (208)
|+|+||+..|++|++++++++++++|++ +++|+|||+|+||| ++++.++++|+++||++ +|||+||++++|+++
T Consensus 95 ~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPvd~~t~----~~~~~~~~~p~~~ig~~t~LDs~R~~~~la~~l 170 (333)
T 5mdh_A 95 MERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPANTNCL----TASKSAPSIPKENFSCLTRLDHNRAKAQIALKL 170 (333)
T ss_dssp CCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHH----HHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCchHHHHH----HHHHHcCCCCcCEEEEEEhHHHHHHHHHHHHHh
Confidence 7899999999999999999999999998 69999999999865 56777765555668875 699999999999999
Q ss_pred CCCCCccccce-eccCCCCceeecccCCCCC---CCC------CHH--HHHHHHHHHHHH-HHHhhcccccCCccchHH-
Q psy9933 79 GLNPTDVNVPV-IGGHAGITIIPLISQATPS---VSF------PDD--QLKALTGRIQEA-VSLKNGIEKNLGLGKLSD- 144 (208)
Q Consensus 79 ~v~~~~v~~~V-iGeH~g~~~vp~~S~~~~~---~~~------~~~--~~~~l~~~v~~~-~~~~~~k~~~~g~~~~~~- 144 (208)
|++|++|++++ |||| |++++|+||++++. ..+ +++ +.+++.++++++ +++...|. +++.|++
T Consensus 171 ~v~~~~v~~~vV~GeH-gds~vp~~S~a~v~i~g~~~~~~~~~~~~~~~~~~~~~~v~~~g~eIi~~k~---~ssa~~~a 246 (333)
T 5mdh_A 171 GVTSDDVKNVIIWGNH-SSTQYPDVNHAKVKLQAKEVGVYEAVKDDSWLKGEFITTVQQRGAAVIKARK---LSSAMSAA 246 (333)
T ss_dssp TCCGGGEECCEEEBCS-STTCEEECTTCEEECSSCEEEHHHHHCCHHHHHTHHHHHHHHHHHHHHHHHS---SCCCHHHH
T ss_pred CcCHHHeeecEEEEcC-CCCEEEeeeccEeccCCeeccHHHhhccccccHHHHHHHHHHHHHHHHHccC---chHHHHHH
Confidence 99999999984 9999 78999999999641 111 122 246899999998 55544320 5678899
Q ss_pred HHHHHHHhhhc----------------C-C---CCcEEEe----ecCCeeEEecc-CCCCCHHHHHHHHHHHHHHHHHHH
Q psy9933 145 FEKERQQFSPF----------------I-K---TFASFFS----PQKNGIEKNLG-LGKLSDFEKELVKAAVPELKKNIA 199 (208)
Q Consensus 145 ~a~~~~i~ai~----------------~-~---~~~~~~s----ig~~Gv~~i~~-lp~L~~~E~~~l~~sa~~l~~~i~ 199 (208)
.++.+++++++ + + ++++||| + ++|++++++ + +||++|+++|++|++.|++.++
T Consensus 247 ~~~~~~~~~il~~~~~~~v~~~s~~~~G~~YGi~~~v~~s~P~~~-~~Gv~~iv~~l-~L~~~E~~~l~~sa~~L~~~~~ 324 (333)
T 5mdh_A 247 KAICDHVRDIWFGTPEGEFVSMGIISDGNSYGVPDDLLYSFPVTI-KDKTWKIVEGL-PINDFSREKMDLTAKELAEEKE 324 (333)
T ss_dssp HHHHHHHHHHHHCCCTTCCEEEEEECTTCSSSCCSSCEEEEEEEE-ETTEEEECCCC-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCeEEEEEEecCCcccCCCCCeEEEEEEEE-cCCeEEEcCCC-CCCHHHHHHHHHHHHHHHHHHH
Confidence 88888888753 1 1 2478999 8 999999997 8 7999999999999999999999
Q ss_pred HHHHHHhh
Q psy9933 200 KGEEFVAK 207 (208)
Q Consensus 200 ~~~~~~~~ 207 (208)
++++|+..
T Consensus 325 ~~~~~l~~ 332 (333)
T 5mdh_A 325 TAFEFLSS 332 (333)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99999854
No 25
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=100.00 E-value=4.9e-42 Score=297.52 Aligned_cols=192 Identities=26% Similarity=0.395 Sum_probs=170.9
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEee-hhhHHHHHHHHHHHhC
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVT-TLDIVRANTFVAEAKG 79 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~-~LDs~R~~~~la~~l~ 79 (208)
|+|+|++..|+++++++++++.+++|+++++++|||+|+++ +++++.+|||++||+|+| .||++|+++++|+++|
T Consensus 86 ~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNPv~~~t----~~~~~~~~~~~~rviG~gt~LD~~r~~~~la~~lg 161 (309)
T 1ur5_A 86 MSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPLDAMT----YLAAEVSGFPKERVIGQAGVLDAARYRTFIAMEAG 161 (309)
T ss_dssp ---CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCSSHHHHH----HHHHHHHCCCGGGEEECCHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCCchHHHH----HHHHHHcCCCHHHEEECCcchHHHHHHHHHHHHhC
Confidence 57999999999999999999999999999999999999985 467888999999999995 6999999999999999
Q ss_pred CCCCccccceeccCCCCceeecccCCCC----CCC-CCHHHHHHHHHHHHHH-HHHhh--cccccCCccchHH-HHHHHH
Q psy9933 80 LNPTDVNVPVIGGHAGITIIPLISQATP----SVS-FPDDQLKALTGRIQEA-VSLKN--GIEKNLGLGKLSD-FEKERQ 150 (208)
Q Consensus 80 v~~~~v~~~ViGeH~g~~~vp~~S~~~~----~~~-~~~~~~~~l~~~v~~~-~~~~~--~k~~~~g~~~~~~-~a~~~~ 150 (208)
++|++|+++||||| |++++|+||++++ ..+ +++++++++.++++++ +++.. +| |+++||+ .|++++
T Consensus 162 v~~~~v~~~v~G~H-g~t~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~v~~~g~eii~~~~k----gs~~~~~a~a~~~~ 236 (309)
T 1ur5_A 162 VSVEDVQAMLMGGH-GDEMVPLPRFSCISGIPVSEFIAPDRLAQIVERTRKGGGEIVNLLKT----GSAYYAPAAATAQM 236 (309)
T ss_dssp CCGGGEEECCEECS-GGGEECCGGGEEETTEEGGGTSCHHHHHHHHHHHHTHHHHHHHHHSS----CCCCHHHHHHHHHH
T ss_pred CChhheeEEEecCc-CCceeeeeecceeCCEeHHHHcCHhHHHHHHHHHHhhhHHhhhhccC----CCcHHHHHHHHHHH
Confidence 99999999999999 8999999999873 233 4778899999999987 66655 78 9999999 999999
Q ss_pred Hhhhc-CC---------------CCcEEEe----ecCCeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy9933 151 QFSPF-IK---------------TFASFFS----PQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKGE 202 (208)
Q Consensus 151 i~ai~-~~---------------~~~~~~s----ig~~Gv~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~~~ 202 (208)
+++|+ |. -+++||| +|++|+++++++ +|+++|+++|++|++.|++.+++..
T Consensus 237 ~~ai~~~~~~~~~~~~~~~g~~g~~~~~~~vP~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~~~ 307 (309)
T 1ur5_A 237 VEAVLKDKKRVMPVAAYLTGQYGLNDIYFGVPVILGAGGVEKILEL-PLNEEEMALLNASAKAVRATLDTLK 307 (309)
T ss_dssp HHHHHTTCCEEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHcCCCcEEEEEEEecCccCCcceEEEEEEEEeCCceEEecCC-CCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 99996 11 1478999 999999999998 8999999999999999999998764
No 26
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=100.00 E-value=1.2e-41 Score=295.96 Aligned_cols=191 Identities=24% Similarity=0.282 Sum_probs=171.8
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEee-hhhHHHHHHHHHHHhC
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVT-TLDIVRANTFVAEAKG 79 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~-~LDs~R~~~~la~~l~ 79 (208)
|+|+|++..|+++++++++.+.+++|+++++++|||+|+++ +++++.+|||++||+|+| .||++|+++++|+++|
T Consensus 90 ~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tNPv~~~~----~~~~~~s~~p~~rviG~gt~lD~~r~~~~la~~l~ 165 (316)
T 1ldn_A 90 ETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVDILT----YATWKFSGLPHERVIGSGTILDTARFRFLLGEYFS 165 (316)
T ss_dssp TCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSSHHHHH----HHHHHHHTCCGGGEEECTTHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCCchHHHH----HHHHHHhCCCHHHEEecccchHHHHHHHHHHHHhC
Confidence 58999999999999999999999999999999999999985 467888899999999995 6999999999999999
Q ss_pred CCCCccccceeccCCCCceeecccCCCC----CCC-------CCHHHHHHHHHHHHHH-HHHhhcccccCCccchHH-HH
Q psy9933 80 LNPTDVNVPVIGGHAGITIIPLISQATP----SVS-------FPDDQLKALTGRIQEA-VSLKNGIEKNLGLGKLSD-FE 146 (208)
Q Consensus 80 v~~~~v~~~ViGeH~g~~~vp~~S~~~~----~~~-------~~~~~~~~l~~~v~~~-~~~~~~k~~~~g~~~~~~-~a 146 (208)
++|++|++|||||| |++++|+||++++ ..+ +++++++++.++++++ +++..+| |+++|++ .|
T Consensus 166 v~~~~v~~~v~G~H-G~~~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~k----g~~~~~~a~a 240 (316)
T 1ldn_A 166 VAPQNVHAYIIGEH-GDTELPVWSQAYIGVMPIRKLVESKGEEAQKDLERIFVNVRDAAYQIIEKK----GATYYGIAMG 240 (316)
T ss_dssp SCGGGEEEEEEBCS-STTCEEEEEEEEETTEESTTTSGGGTTTHHHHHHHHHHHHHHHHHHHHHHH----SCCCHHHHHH
T ss_pred CCHHHeEEEEeccc-CCceeeeehhccCCCEEHHHHhhccccCCHHHHHHHHHHHHHhHHHHHhcc----CCcHHHHHHH
Confidence 99999999999999 9999999999863 223 3455678999999988 7777788 9999999 99
Q ss_pred HHHHHhhhc-C--------------C-CCcEEEe----ecCCeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9933 147 KERQQFSPF-I--------------K-TFASFFS----PQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKG 201 (208)
Q Consensus 147 ~~~~i~ai~-~--------------~-~~~~~~s----ig~~Gv~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~~ 201 (208)
+++++++|+ | + -+++||| +|++|+++++++ +|+++|+++|++|++.|++.+++.
T Consensus 241 ~~~~~~ai~~~~~~~~~~~~~~~g~yg~~~~~~~vP~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~~ 314 (316)
T 1ldn_A 241 LARVTRAILHNENAILTVSAYLDGLYGERDVYIGVPAVINRNGIREVIEI-ELNDDEKNRFHHSAATLKSVLARA 314 (316)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEEESTTSCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhCCCcEEEEEEEecCccCCcceEEEEEEEEeCCeeEEEccC-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999996 1 1 1478999 999999999998 899999999999999999998865
No 27
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=100.00 E-value=9.7e-42 Score=299.66 Aligned_cols=192 Identities=23% Similarity=0.221 Sum_probs=150.1
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhC-CCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEe-ehhhHHHHHHHHHHHh
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVA-PKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGV-TTLDIVRANTFVAEAK 78 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~-p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~-~~LDs~R~~~~la~~l 78 (208)
|||+|||..|++||++++++|+++| |+++++|+|||+|+|+|+ ++++.+|+|++|+||. |+||++||+++||+++
T Consensus 116 mtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPvd~~~~i---~~~~~~g~~~~r~i~~~t~LDs~R~~~~la~~~ 192 (345)
T 4h7p_A 116 MERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPANTNALI---LLKSAQGKLNPRHVTAMTRLDHNRALSLLARKA 192 (345)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHH---HHHHTTTCSCGGGEEECCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCcchHHHH---HHHHccCCCCcceeeeccchhHHHHHHHHHHHH
Confidence 8999999999999999999999997 789999999999999875 3445778888888888 5799999999999999
Q ss_pred CCCCCcccc-ceeccCCCCceeecccCCCCC----CC-CCHHHH-HHHHHHHHHH-HHHhhcccccCCccchHH-HHHHH
Q psy9933 79 GLNPTDVNV-PVIGGHAGITIIPLISQATPS----VS-FPDDQL-KALTGRIQEA-VSLKNGIEKNLGLGKLSD-FEKER 149 (208)
Q Consensus 79 ~v~~~~v~~-~ViGeH~g~~~vp~~S~~~~~----~~-~~~~~~-~~l~~~v~~~-~~~~~~k~~~~g~~~~~~-~a~~~ 149 (208)
|++|++|++ +||||| |++++|+||++++. .+ ++++.+ +++.++++++ .++...|. ++++||+ +|+++
T Consensus 193 ~v~~~~V~~~~V~G~H-G~t~vp~~s~a~v~g~~~~~~~~~~~~~~~~~~~v~~~g~eIi~~kg---~ss~~s~a~a~~~ 268 (345)
T 4h7p_A 193 GVPVSQVRNVIIWGNH-SSTQVPDTDSAVIGTTPAREAIKDDALDDDFVQVVRGRGAEIIQLRG---LSSAMSAAKAAVD 268 (345)
T ss_dssp TSCGGGEECCEEEBCS-STTCEEECTTCEETTEEGGGGCCC------HHHHHHHHHHHHHHHHS---SCCCHHHHHHHHH
T ss_pred CcChhheecceeecCC-CCeEEeeeccceECCccHHHhcchhhHHHHHHHHHHhhhhhhhhcCC---CcchhhHHHHHHH
Confidence 999999985 578999 99999999999742 22 333333 4799999987 44333230 5788999 99999
Q ss_pred HHhhhc-C-------------------CCCcEEEe----ecCCeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9933 150 QQFSPF-I-------------------KTFASFFS----PQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAK 200 (208)
Q Consensus 150 ~i~ai~-~-------------------~~~~~~~s----ig~~Gv~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~ 200 (208)
++++++ + .++++||| ++ +|++++++...|+++|+++|++|++.|+++.+.
T Consensus 269 ~~~~~l~~~~~~~~vs~~v~s~~g~YGi~~~v~~s~Pv~~~-~G~~~iv~~l~l~~~e~~~l~~s~~~L~~E~~~ 342 (345)
T 4h7p_A 269 HVHDWIHGTPEGVYVSMGVYSDENPYGVPSGLIFSFPCTCH-AGEWTVVSGKLNGDLGKQRLASTIAELQEERAQ 342 (345)
T ss_dssp HHHHHHHCCCTTCCEEEEEECTTCTTCCCSSCEEEEEEEEE-TTEEEECCSCC-----CGGGHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCceEEEEEEEeCCCCcCCCCCEEEEEEEEEe-CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999985 1 24678999 66 577777653279999999999999999997654
No 28
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=100.00 E-value=6.2e-41 Score=290.95 Aligned_cols=191 Identities=23% Similarity=0.282 Sum_probs=166.4
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEe-ehhhHHHHHHHHHHHhC
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGV-TTLDIVRANTFVAEAKG 79 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~-~~LDs~R~~~~la~~l~ 79 (208)
|+|.|++..|+++++++++.+.++| +++++++|||+|++|+ ++++.+|||++||+|+ |.||++|+++++|+++|
T Consensus 90 ~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv~~~t~----~~~k~~~~p~~rviG~gt~LD~~r~~~~la~~lg 164 (313)
T 1hye_A 90 MSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPVDVMTY----KALVDSKFERNQVFGLGTHLDSLRFKVAIAKFFG 164 (313)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSHHHHHH----HHHHHHCCCTTSEEECTTHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcHHHHHH----HHHHhhCcChhcEEEeCccHHHHHHHHHHHHHhC
Confidence 6899999999999999999999999 9999999999999864 6678899999999999 56999999999999999
Q ss_pred CCCCccccceeccCCCCceeecccCCCC----CCCC---CHHHHHHHHHHHHHH-HHHhhcccccCCccchHH-HHHHHH
Q psy9933 80 LNPTDVNVPVIGGHAGITIIPLISQATP----SVSF---PDDQLKALTGRIQEA-VSLKNGIEKNLGLGKLSD-FEKERQ 150 (208)
Q Consensus 80 v~~~~v~~~ViGeH~g~~~vp~~S~~~~----~~~~---~~~~~~~l~~~v~~~-~~~~~~k~~~~g~~~~~~-~a~~~~ 150 (208)
++|++|+++||||| |++++|+||++++ ..++ ++++++++.++++++ +++..+| |+++||+ .|++++
T Consensus 165 v~~~~v~~~v~G~H-g~~~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~k----gs~~~~~a~a~~~~ 239 (313)
T 1hye_A 165 VHIDEVRTRIIGEH-GDSMVPLLSATSIGGIPIQKFERFKELPIDEIIEDVKTKGEQIIRLK----GGSEFGPAAAILNV 239 (313)
T ss_dssp CCGGGEECCEEECS-STTEEECGGGCEETTEEGGGCGGGGGCCHHHHHHHHHHHTTSCCC----------CCHHHHHHHH
T ss_pred cCHHHeEEEEeecc-CCcccceeeccccCCEEHHHHhcCCHHHHHHHHHHHHhccceeecCC----CCcHHHHHHHHHHH
Confidence 99999999999999 8999999999873 2333 566689999999988 7766678 9999999 999999
Q ss_pred Hhhhc-C--------------CC--CcEEEe----ecCCeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy9933 151 QFSPF-I--------------KT--FASFFS----PQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKGE 202 (208)
Q Consensus 151 i~ai~-~--------------~~--~~~~~s----ig~~Gv~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~~~ 202 (208)
+++|+ | ++ +++||| +|++|+++++++ +|+++|+++|++|++.|++.+++..
T Consensus 240 ~~ai~~~~~~~~~~~~~~~g~~~g~~~~~~~~P~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~~~ 311 (313)
T 1hye_A 240 VRCIVNNEKRLLTLSAYVDGEFDGIRDVCIGVPVKIGRDGIEEVVSI-ELDKDEIIAFRKSAEIIKKYCEEVK 311 (313)
T ss_dssp HHHHHTTCCEEEEEEEEEESSSSSCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHcCCCeEEEEEEeecceecCccceEEEEEEEEeCCeeEEecCC-CCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 99996 1 11 378899 999999999998 8999999999999999999998764
No 29
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=100.00 E-value=3e-40 Score=288.52 Aligned_cols=192 Identities=27% Similarity=0.369 Sum_probs=171.7
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEee-hhhHHHHHHHHHHHhC
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVT-TLDIVRANTFVAEAKG 79 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~-~LDs~R~~~~la~~l~ 79 (208)
|+|.|++..|++|++++++++.+++|+++++++|||+|+++ +++++.+||||+||+|++ .|||+||++++|+++|
T Consensus 98 ~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~~~~t----~~~~~~~~~~~~rviG~~t~Ld~~R~~~~la~~lg 173 (328)
T 2hjr_A 98 MTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNPLDAMV----YYFKEKSGIPANKVCGMSGVLDSARFRCNLSRALG 173 (328)
T ss_dssp CCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHH----HHHHHHHCCCGGGEEESCHHHHHHHHHHHHHHHHT
T ss_pred CchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecCchHHHH----HHHHHhcCCChhhEEEeCcHHHHHHHHHHHHHHhC
Confidence 57999999999999999999999999999999999999975 567788999999999996 6999999999999999
Q ss_pred CCCCccccceeccCCCCceeecccCCCCC----CC------CCHHHHHHHHHHHHHH-HHHhh--cccccCCccchHH-H
Q psy9933 80 LNPTDVNVPVIGGHAGITIIPLISQATPS----VS------FPDDQLKALTGRIQEA-VSLKN--GIEKNLGLGKLSD-F 145 (208)
Q Consensus 80 v~~~~v~~~ViGeH~g~~~vp~~S~~~~~----~~------~~~~~~~~l~~~v~~~-~~~~~--~k~~~~g~~~~~~-~ 145 (208)
++|++|+++|+|+| |++++|+||+++.. .+ +++++++++.++++++ +++.. +| |++.||+ .
T Consensus 174 v~~~~v~~~v~G~H-g~t~~p~~s~~~v~G~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~~~~----gs~~~~~a~ 248 (328)
T 2hjr_A 174 VKPSDVSAIVVGGH-GDEMIPLTSSVTIGGILLSDFVEQGKITHSQINEIIKKTAFGGGEIVELLKT----GSAFYAPAA 248 (328)
T ss_dssp SCGGGEECCEEBCS-STTCEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHHHHSS----CCCCHHHHH
T ss_pred CCHHHeeEEEecCC-CCceeeeeeeceECCEEHHHHhhccCCCHHHHHHHHHHHHhhHHHHHhhhCC----CchHHHHHH
Confidence 99999999999999 89999999998632 11 4667788999999887 66555 78 9999999 9
Q ss_pred HHHHHHhhhc-CC---------------CCcEEEe----ecCCeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy9933 146 EKERQQFSPF-IK---------------TFASFFS----PQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKGE 202 (208)
Q Consensus 146 a~~~~i~ai~-~~---------------~~~~~~s----ig~~Gv~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~~~ 202 (208)
|+++++++|+ |. .+++||| +|++|+++++++ +|+++|+++|++|++.|++.++++.
T Consensus 249 a~~~i~~ai~~~~~~v~~~~v~~~G~~g~~~~~~~vP~~ig~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~~~~~~~~ 324 (328)
T 2hjr_A 249 SAVAMAQAYLKDSKSVLVCSTYLTGQYNVNNLFVGVPVVIGKNGIEDVVIV-NLSDDEKSLFSKSVESIQNLVQDLK 324 (328)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcEEEEEEeecCccCCCceEEEEEEEEeCCeeEEecCC-CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999996 11 1478999 999999999998 8999999999999999999998875
No 30
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=100.00 E-value=4.7e-40 Score=287.65 Aligned_cols=191 Identities=25% Similarity=0.364 Sum_probs=171.1
Q ss_pred CHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEee-hhhHHHHHHHHHHHhCC
Q psy9933 2 TRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVT-TLDIVRANTFVAEAKGL 80 (208)
Q Consensus 2 sR~dl~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~-~LDs~R~~~~la~~l~v 80 (208)
+|+|++..|++|+++++++|.++||+++++++|||+|+++ +++++.+||||+||+|++ .||++||++++|+++|+
T Consensus 100 ~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP~~~~t----~~~~~~~~~~~~rviG~gt~LD~~R~~~~la~~lgv 175 (331)
T 1pzg_A 100 SRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLDCMV----KVMCEASGVPTNMICGMACMLDSGRFRRYVADALSV 175 (331)
T ss_dssp CGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHH----HHHHHHHCCCGGGEEECCHHHHHHHHHHHHHHHHTS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCchHHHH----HHHHHhcCCChhcEEeccchHHHHHHHHHHHHHhCC
Confidence 7999999999999999999999999999999999999975 567788899999999995 69999999999999999
Q ss_pred CCCccccceeccCCCCceeecccCCCCC----CC------CCHHHHHHHHHHHHHH-HHHhh--cccccCCccchHH-HH
Q psy9933 81 NPTDVNVPVIGGHAGITIIPLISQATPS----VS------FPDDQLKALTGRIQEA-VSLKN--GIEKNLGLGKLSD-FE 146 (208)
Q Consensus 81 ~~~~v~~~ViGeH~g~~~vp~~S~~~~~----~~------~~~~~~~~l~~~v~~~-~~~~~--~k~~~~g~~~~~~-~a 146 (208)
+|++|+++|+|+| |++++|+||+++.. .+ +++++++++.++++++ .++.. +| |++.||+ .+
T Consensus 176 ~~~~v~~~v~G~H-g~~~~p~~s~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~eii~~~~k----gst~~~~a~a 250 (331)
T 1pzg_A 176 SPRDVQATVIGTH-GDCMVPLVRYITVNGYPIQKFIKDGVVTEKQLEEIAEHTKVSGGEIVRFLGQ----GSAYYAPAAS 250 (331)
T ss_dssp CGGGEECCEEBCS-STTCEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHSS----SCCCHHHHHH
T ss_pred CHHHceEEEecCC-CCCEeeeeecceECCEEHHHHhhcccCCHHHHHHHHHHHHhccHHHHHhhcC----CCccchHHHH
Confidence 9999999999999 89999999998732 11 4667788999999887 66655 68 9999999 99
Q ss_pred HHHHHhhhc-CC---------------CCcEEEe----ecCCeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy9933 147 KERQQFSPF-IK---------------TFASFFS----PQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKGE 202 (208)
Q Consensus 147 ~~~~i~ai~-~~---------------~~~~~~s----ig~~Gv~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~~~ 202 (208)
+++++++|+ |. .+++||| +|++|+++++++ +|+++|+++|++|++.|++.+++..
T Consensus 251 ~~~ii~ai~~~~~~~~~~~v~~~G~~g~~~~~~~vP~~vg~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~~~~~~~~ 325 (331)
T 1pzg_A 251 AVAMATSFLNDEKRVIPCSVYCNGEYGLKDMFIGLPAVIGGAGIERVIEL-ELNEEEKKQFQKSVDDVMALNKAVA 325 (331)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcEEEEEEEecCccCCCceEEEEEEEEeCCeeEEecCC-CCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999996 11 1478899 999999999998 8999999999999999999998774
No 31
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=100.00 E-value=4.3e-40 Score=285.22 Aligned_cols=193 Identities=23% Similarity=0.374 Sum_probs=172.1
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEee-hhhHHHHHHHHHHHhC
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVT-TLDIVRANTFVAEAKG 79 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~-~LDs~R~~~~la~~l~ 79 (208)
|+|.||+..|+++++++++.+.+++|+++++++|||+|.++ +++++.+++|++||+|+| .||++|+++++|+++|
T Consensus 85 ~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~~~~~----~~~~~~~~~~~~rviG~gt~ld~~r~~~~la~~l~ 160 (310)
T 1guz_A 85 MTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPLDIMT----HVAWVRSGLPKERVIGMAGVLDAARFRSFIAMELG 160 (310)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSSHHHHH----HHHHHHHCSCGGGEEEECHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCchHHHH----HHHHHhcCCChHHEEECCCchHHHHHHHHHHHHhC
Confidence 47999999999999999999999999999999999999975 467788899999999995 6999999999999999
Q ss_pred CCCCccccceeccCCCCceeecccCCCCC----CC-CCHHHHHHHHHHHHHH-HHHhh--cccccCCccchHH-HHHHHH
Q psy9933 80 LNPTDVNVPVIGGHAGITIIPLISQATPS----VS-FPDDQLKALTGRIQEA-VSLKN--GIEKNLGLGKLSD-FEKERQ 150 (208)
Q Consensus 80 v~~~~v~~~ViGeH~g~~~vp~~S~~~~~----~~-~~~~~~~~l~~~v~~~-~~~~~--~k~~~~g~~~~~~-~a~~~~ 150 (208)
++|++|+++|||+| |++++|+||++++. .+ +++++++++.++++++ +++.. +| |+++||+ .|++++
T Consensus 161 v~~~~v~~~v~G~H-g~~~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~v~~~g~~ii~~~~k----gs~~~~~a~a~~~~ 235 (310)
T 1guz_A 161 VSMQDINACVLGGH-GDAMVPVVKYTTVAGIPISDLLPAETIDKLVERTRNGGAEIVEHLKQ----GSAFYAPASSVVEM 235 (310)
T ss_dssp CCGGGEECCEEECS-GGGEEECGGGCEETTEEHHHHSCHHHHHHHHHHHHTHHHHHHHHHSS----SCCCHHHHHHHHHH
T ss_pred CCHHHeEEEEEccc-CCcEeeeeecccCCCEEHHHHCCHHHHHHHHHHHHHhHHHHHhhcCC----CCcHHHHHHHHHHH
Confidence 99999999999999 79999999998742 22 5777899999999987 66655 78 9999999 999999
Q ss_pred Hhhhc-CC---------------CCcEEEe----ecCCeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q psy9933 151 QFSPF-IK---------------TFASFFS----PQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKGEE 203 (208)
Q Consensus 151 i~ai~-~~---------------~~~~~~s----ig~~Gv~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~~~~ 203 (208)
+++|+ |. -+++||| +|++|+++++++ +|+++|+++|++|++.|++.++++.+
T Consensus 236 ~~ai~~~~~~~~~~~~~~~g~~g~~~~~~~~P~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~~~~ 307 (310)
T 1guz_A 236 VESIVLDRKRVLPCAVGLEGQYGIDKTFVGVPVKLGRNGVEQIYEI-NLDQADLDLLQKSAKIVDENCKMLES 307 (310)
T ss_dssp HHHHHTTCCEEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHTC--
T ss_pred HHHHHcCCCcEEEEEEeecCccCCcceEEEEEEEEeCCeeEEEcCC-CCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99996 10 1478999 999999999998 89999999999999999999987654
No 32
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=100.00 E-value=4.3e-40 Score=286.93 Aligned_cols=189 Identities=24% Similarity=0.318 Sum_probs=170.0
Q ss_pred HHHHHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEee-hhhHHHHHHHHHHHhCCC
Q psy9933 3 RDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVT-TLDIVRANTFVAEAKGLN 81 (208)
Q Consensus 3 R~dl~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~-~LDs~R~~~~la~~l~v~ 81 (208)
|.|++..|++|++++++++.+++|+++++++|||+|+++ +++++.+||||+||+|++ .|||+||++++|+++|++
T Consensus 95 r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP~~~~t----~~~~~~~g~~~~rviG~gt~ld~~R~~~~la~~lgv~ 170 (322)
T 1t2d_A 95 RDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDVMV----QLLHQHSGVPKNKIIGLGGVLDTSRLKYYISQKLNVC 170 (322)
T ss_dssp GGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHHHHH----HHHHHHHCCCGGGEEECCHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCChHHHH----HHHHHhcCCChHHEEeccCcccHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999999999999985 467788899999999995 699999999999999999
Q ss_pred CCccccceeccCCCCceeecccCCCCC----C------CCCHHHHHHHHHHHHHH-HHHhhcccccCCccchHH-HHHHH
Q psy9933 82 PTDVNVPVIGGHAGITIIPLISQATPS----V------SFPDDQLKALTGRIQEA-VSLKNGIEKNLGLGKLSD-FEKER 149 (208)
Q Consensus 82 ~~~v~~~ViGeH~g~~~vp~~S~~~~~----~------~~~~~~~~~l~~~v~~~-~~~~~~k~~~~g~~~~~~-~a~~~ 149 (208)
|++|+++|+||| |++++|.||++.+. . .+++++++++.++++++ +++...| |+++||+ .|+++
T Consensus 171 ~~~v~~~v~G~H-G~~~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~k----gs~~~~~a~a~~~ 245 (322)
T 1t2d_A 171 PRDVNAHIVGAH-GNKMVLLKRYITVGGIPLQEFINNKLISDAELEAIFDRTVNTALEIVNLH----ASPYVAPAAAIIE 245 (322)
T ss_dssp GGGEECCEEBCS-STTCEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHHHT----SSCCHHHHHHHHH
T ss_pred HHHeEEEEEcCC-CCcEEeeHHHceECcEeHHHhccccCCCHHHHHHHHHHHHHHHHHHHhcc----CchHHHHHHHHHH
Confidence 999999999999 89999999998632 1 15677789999999987 7766667 9999999 99999
Q ss_pred HHhhhc-C--------------C-CCcEEEe----ecCCeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9933 150 QQFSPF-I--------------K-TFASFFS----PQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKG 201 (208)
Q Consensus 150 ~i~ai~-~--------------~-~~~~~~s----ig~~Gv~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~~ 201 (208)
++++|+ | + .+++||| +|++|+++++++ +|+++|+++|++|++.|++.++.+
T Consensus 246 ~~~ai~~~~~~v~~~s~~~~g~~g~~~~~~~vP~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~L~~~~~~~ 316 (322)
T 1t2d_A 246 MAESYLKDLKKVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIEL-QLNSEEKAKFDEAIAETKRMKALA 316 (322)
T ss_dssp HHHHHHTTCCEEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHhCCCCEEEEEEEecCccCCCceEEEEEEEEeCCeeEEeCCC-CCCHHHHHHHHHHHHHHHHHHHHh
Confidence 999996 1 1 1478999 999999999998 899999999999999999988765
No 33
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=100.00 E-value=2e-39 Score=280.38 Aligned_cols=189 Identities=20% Similarity=0.255 Sum_probs=152.7
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEee-hhhHHHHHHHHHHHhC
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVT-TLDIVRANTFVAEAKG 79 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~-~LDs~R~~~~la~~l~ 79 (208)
|+|+|++..|++|++++++++.+++|+++++++|||+|++++ ++++.+ |++||+|+| .||++|+++++|+++|
T Consensus 83 ~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~~~~~----~~~~~~--~~~rviG~gt~Ld~~r~~~~la~~l~ 156 (304)
T 2v6b_A 83 ESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVDLLTD----LATQLA--PGQPVIGSGTVLDSARFRHLMAQHAG 156 (304)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHHHHHH----HHHHHS--CSSCEEECTTHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchHHHHH----HHHHhC--ChhcEEeCCcCchHHHHHHHHHHHhC
Confidence 689999999999999999999999999999999999999754 566666 999999995 6999999999999999
Q ss_pred CCCCccccceeccCCCCceeecccCCCCC----CC--------CCHHHHHHHHHHHHHH-HHHhhcccccCCccchHH-H
Q psy9933 80 LNPTDVNVPVIGGHAGITIIPLISQATPS----VS--------FPDDQLKALTGRIQEA-VSLKNGIEKNLGLGKLSD-F 145 (208)
Q Consensus 80 v~~~~v~~~ViGeH~g~~~vp~~S~~~~~----~~--------~~~~~~~~l~~~v~~~-~~~~~~k~~~~g~~~~~~-~ 145 (208)
++|++|+++|+|+| |++++|+||++++. .+ +++++++++.++++++ +++..+| |+++|++ .
T Consensus 157 v~~~~v~~~v~G~H-g~~~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~eii~~k----g~t~~~~a~ 231 (304)
T 2v6b_A 157 VDGTHAHGYVLGEH-GDSEVLAWSSAMVAGMPVADFMQAQNLPWNEQVRAKIDEGTRNAAASIIEGK----RATYYGIGA 231 (304)
T ss_dssp SCGGGEECCEEESS-STTEEECGGGCEETTEEHHHHHHHHTCCCSHHHHHHHHHHHTC---------------CCHHHHH
T ss_pred cCHHHceEEEecCC-CCceeeehhHccCCCEEHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhcc----CCcHHHHHH
Confidence 99999999999999 99999999999742 11 4667789999999988 7777788 9999999 9
Q ss_pred HHHHHHhhhc-CC-----------CCcEEEe----ecCCeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9933 146 EKERQQFSPF-IK-----------TFASFFS----PQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKG 201 (208)
Q Consensus 146 a~~~~i~ai~-~~-----------~~~~~~s----ig~~Gv~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~~ 201 (208)
|+++++++|+ |. +.++||| +|++|+++++++ +|+++|+++|++|++.|++.+++.
T Consensus 232 a~~~~~~ai~~~~~~~~~~~~~~~gyg~~~~~P~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~~ 302 (304)
T 2v6b_A 232 ALARITEAVLRDRRAVLTVSAPTPEYGVSLSLPRVVGRQGVLSTLHP-KLTGDEQQKLEQSAGVLRGFKQQL 302 (304)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHhCCCcEEEEEEEECCcCcEEEEEEEEeCCeeEEEcCC-CCCHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999996 21 1238899 999999999998 899999999999999999988764
No 34
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=100.00 E-value=1.5e-38 Score=276.49 Aligned_cols=192 Identities=27% Similarity=0.378 Sum_probs=172.5
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEee-hhhHHHHHHHHHHHhC
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVT-TLDIVRANTFVAEAKG 79 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~-~LDs~R~~~~la~~l~ 79 (208)
|+|+||+..|++|++++++++.+++|+++++++|||+|+++ +++++.++||++||+|++ .||++|+++++|+++|
T Consensus 83 ~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~~~~----~~~~~~~~~~~~rviG~~t~ld~~r~~~~la~~lg 158 (319)
T 1a5z_A 83 ETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVDVLT----YFFLKESGMDPRKVFGSGTVLDTARLRTLIAQHCG 158 (319)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHH----HHHHHHHTCCTTTEEECTTHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcHHHHH----HHHHHHhCCChhhEEeeCccHHHHHHHHHHHHHhC
Confidence 57999999999999999999999999999999999999975 467777789999999995 6999999999999999
Q ss_pred CCCCccccceeccCCCCceeecccCCCCC----------CC-CCHHHHHHHHHHHHHH-HHHhhcccccCCccchHH-HH
Q psy9933 80 LNPTDVNVPVIGGHAGITIIPLISQATPS----------VS-FPDDQLKALTGRIQEA-VSLKNGIEKNLGLGKLSD-FE 146 (208)
Q Consensus 80 v~~~~v~~~ViGeH~g~~~vp~~S~~~~~----------~~-~~~~~~~~l~~~v~~~-~~~~~~k~~~~g~~~~~~-~a 146 (208)
++|++|+++|+||| |++++|+||++++. .. +++++++++.++++++ +++..+| |++++++ .|
T Consensus 159 v~~~~v~~~v~G~h-g~~~~p~~s~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~k----g~~~~~~a~a 233 (319)
T 1a5z_A 159 FSPRSVHVYVIGEH-GDSEVPVWSGAMIGGIPLQNMCQVCQKCDSKILENFAEKTKRAAYEIIERK----GATHYAIALA 233 (319)
T ss_dssp CCGGGEECCEEBCS-STTCEECGGGCEETTEEHHHHHTTSSSCCHHHHHHHHHHHHHHHHHHHHHH----SCCCHHHHHH
T ss_pred cCHHHceEEEEeCC-CCCcccchhhceECCEEHHHHhhcccccCHHHHHHHHHHHHHhhhhhhccC----CchHHHHHHH
Confidence 99999999999999 99999999998732 11 5677789999999998 7776678 9999999 99
Q ss_pred HHHHHhhhc-C--------------C-CCcEEEe----ecCCeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy9933 147 KERQQFSPF-I--------------K-TFASFFS----PQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKGE 202 (208)
Q Consensus 147 ~~~~i~ai~-~--------------~-~~~~~~s----ig~~Gv~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~~~ 202 (208)
+++++++|+ | + -+++||| +|++|+++++++ +|+++|+++|++|++.|++.++++.
T Consensus 234 ~~~~~~ai~~~~~~~~~~~~~~~g~~g~~~~~~~vP~~vg~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~~~~~~~~ 308 (319)
T 1a5z_A 234 VADIVESIFFDEKRVLTLSVYLEDYLGVKDLCISVPVTLGKHGVERILEL-NLNEEELEAFRKSASILKNAINEIT 308 (319)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEESSBTTBCSEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEEEEecCccCccceEEEEEEEEeCCceEEEecC-CCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999996 1 1 1468999 999999999998 8999999999999999999999874
No 35
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=100.00 E-value=1.6e-37 Score=271.20 Aligned_cols=194 Identities=20% Similarity=0.223 Sum_probs=166.7
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhC-CCeEEEEeCCCccccHHHHHHHHHHcC-CCCCCCeEEeehhhHHHHHHHHHHHh
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVA-PKALIGIISNPVNSTVPIAAEVLKKAG-VFDPRRLFGVTTLDIVRANTFVAEAK 78 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~-p~~iiivvtNPvD~~~~~~~~~~~~~~-~~~~~~ViG~~~LDs~R~~~~la~~l 78 (208)
|+|+|++..|+++++++++++.++| |+++++++|||+|++++ ++++.+ |||++||+|.+.||+.|+++++|+++
T Consensus 99 ~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~----~~~~~~~~~p~~~v~g~t~Ld~~r~~~~la~~l 174 (329)
T 1b8p_A 99 MERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAY----IAMKSAPSLPAKNFTAMLRLDHNRALSQIAAKT 174 (329)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHH----HHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHH----HHHHHcCCCCHHHEEEeecHHHHHHHHHHHHHh
Confidence 5899999999999999999999997 99999999999999865 566776 99999999888999999999999999
Q ss_pred CCCCCcccc-ceeccCCCCceeecccCCCCCC----C-CCHHH--HHHHHHHHHHH-HHHhhcccccCCccchH-H-HHH
Q psy9933 79 GLNPTDVNV-PVIGGHAGITIIPLISQATPSV----S-FPDDQ--LKALTGRIQEA-VSLKNGIEKNLGLGKLS-D-FEK 147 (208)
Q Consensus 79 ~v~~~~v~~-~ViGeH~g~~~vp~~S~~~~~~----~-~~~~~--~~~l~~~v~~~-~~~~~~k~~~~g~~~~~-~-~a~ 147 (208)
|++|++|++ +|+|+| |++++|+||++++.. + +++++ .+++.++++++ +++..+| |.+.++ + .|+
T Consensus 175 gv~~~~v~~~~v~G~H-g~s~~p~~s~~~v~g~~~~~~~~~~~~~~~~i~~~v~~~g~eii~~k----g~~~~~~~a~a~ 249 (329)
T 1b8p_A 175 GKPVSSIEKLFVWGNH-SPTMYADYRYAQIDGASVKDMINDDAWNRDTFLPTVGKRGAAIIDAR----GVSSAASAANAA 249 (329)
T ss_dssp TCCGGGEESCEEEBCS-STTCEEECSSCEETTEEHHHHHCCHHHHHHTHHHHHHTHHHHHHHHH----SSCCHHHHHHHH
T ss_pred CcCHHHceEEEEEecc-CCcEeeehHHCeECCeeHHHHhccchhhHHHHHHHHHHHHHhhhhcc----CCChHHHHHHHH
Confidence 999999996 589999 899999999997531 1 22223 57899999988 6666556 555555 4 788
Q ss_pred HHHHhhhc-C-----------------CCCcEEEe----ecCCeeEEecc-CCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy9933 148 ERQQFSPF-I-----------------KTFASFFS----PQKNGIEKNLG-LGKLSDFEKELVKAAVPELKKNIAKGEEF 204 (208)
Q Consensus 148 ~~~i~ai~-~-----------------~~~~~~~s----ig~~Gv~~i~~-lp~L~~~E~~~l~~sa~~l~~~i~~~~~~ 204 (208)
++++++++ + .|+++||| + ++|++++++ + +|+++|+++|++|++.|++.++.+.++
T Consensus 250 ~~~~~ai~~~~~~~~~~~s~~~~g~yg~~~~~~~s~P~~i-~~Gv~~i~~~~-~l~~~e~~~l~~s~~~l~~~~~~~~~~ 327 (329)
T 1b8p_A 250 IDHIHDWVLGTAGKWTTMGIPSDGSYGIPEGVIFGFPVTT-ENGEYKIVQGL-SIDAFSQERINVTLNELLEEQNGVQHL 327 (329)
T ss_dssp HHHHHHHHHCCTTCCEEEEEECCSGGGCCTTCEEEEEEEE-ETTEEEECCCC-CCCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHhcCCCCcEEEEEEEecCccCCCCCeEEEEEEEE-cCCEEEecCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999985 2 14678999 8 999999998 8 899999999999999999999998776
Q ss_pred H
Q psy9933 205 V 205 (208)
Q Consensus 205 ~ 205 (208)
+
T Consensus 328 ~ 328 (329)
T 1b8p_A 328 L 328 (329)
T ss_dssp G
T ss_pred h
Confidence 4
No 36
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=100.00 E-value=3.9e-37 Score=266.07 Aligned_cols=193 Identities=20% Similarity=0.244 Sum_probs=169.4
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEe-ehhhHHHHHHHHHHHhC
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGV-TTLDIVRANTFVAEAKG 79 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~-~~LDs~R~~~~la~~l~ 79 (208)
|+|+||+..|++|++++++.+.+++|+++++++|||+|+++ +++++.+++|++||+|+ +.||++|+++++++.++
T Consensus 89 ~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~~~~----~~~~~~~~~~~~rvig~gt~ld~~r~~~~~a~~l~ 164 (309)
T 1hyh_A 89 GDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISNPVDVIT----ALFQHVTGFPAHKVIGTGTLLDTARMQRAVGEAFD 164 (309)
T ss_dssp ---CTTHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHH----HHHHHHHCCCGGGEEECTTHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCcHHHHH----HHHHHhcCCCHHHEeecCccchHHHHHHHHHHHhC
Confidence 57999999999999999999999999999999999999964 57788889999999999 57999999999999999
Q ss_pred CCCCccccceeccCCCCceeecccCCCCC----CC---CCHHHHHHHHHHHHHH-HHHhhcccccCCccchHH-HHHHHH
Q psy9933 80 LNPTDVNVPVIGGHAGITIIPLISQATPS----VS---FPDDQLKALTGRIQEA-VSLKNGIEKNLGLGKLSD-FEKERQ 150 (208)
Q Consensus 80 v~~~~v~~~ViGeH~g~~~vp~~S~~~~~----~~---~~~~~~~~l~~~v~~~-~~~~~~k~~~~g~~~~~~-~a~~~~ 150 (208)
+++++|+++++|+| |++++|+||++.+. .+ +++++++++.++++++ +++..+| |++.|++ .+++++
T Consensus 165 ~~~~~v~~~v~G~h-g~~~~~~~s~~~v~g~~~~~~~~~~~~~~~~~~~~v~~~g~~ii~~k----g~~~~~~a~a~~~~ 239 (309)
T 1hyh_A 165 LDPRSVSGYNLGEH-GNSQFVAWSTVRVMGQPIVTLADAGDIDLAAIEEEARKGGFTVLNGK----GYTSYGVATSAIRI 239 (309)
T ss_dssp CCGGGCBCCEEBCT-TTTCEECTTTCEETTEEGGGC-----CCHHHHHHHHHHHHHHHHHHH----SSCCHHHHHHHHHH
T ss_pred CChhheEEEEEeCC-CCcEeeccccceECCEEHHHhccCCHHHHHHHHHHHHHhHHHHHhcc----CCchHHHHHHHHHH
Confidence 99999999999999 89999999998632 22 4566789999999988 6666677 8999999 999999
Q ss_pred Hhhhc-C-----------CCCcEEEe----ecCCeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q psy9933 151 QFSPF-I-----------KTFASFFS----PQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKGEE 203 (208)
Q Consensus 151 i~ai~-~-----------~~~~~~~s----ig~~Gv~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~~~~ 203 (208)
+++|+ | .++++|+| +|++|+++++++ +|+++|+++|++|++.|++.++++.+
T Consensus 240 ~~ai~~~~~~~~~~~~~~~g~~~~~~vP~~i~~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~~~~ 307 (309)
T 1hyh_A 240 AKAVMADAHAELVVSNRRDDMGMYLSYPAIIGRDGVLAETTL-DLTTDEQEKLLQSRDYIQQRFDEIVD 307 (309)
T ss_dssp HHHHHTTCCEEEEEEEECTTTCSEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHcCCCcEEEEEEEECCCCeEEEEEEEEeCCceEEEeCC-CCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99996 2 12578999 999999999998 89999999999999999999998765
No 37
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=100.00 E-value=1e-34 Score=251.81 Aligned_cols=192 Identities=23% Similarity=0.361 Sum_probs=170.1
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEee-hhhHHHHHHHHHHHhC
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVT-TLDIVRANTFVAEAKG 79 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~-~LDs~R~~~~la~~l~ 79 (208)
|+|+|++..|+++++++++++.+++|+++++++|||+++++ +.+++.+++||+||+|++ .+|++|+++++++++|
T Consensus 88 ~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~~~~----~~~~~~~~~~~~rviG~~t~ld~~r~~~~la~~lg 163 (317)
T 2ewd_A 88 DDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLDVMV----SHFQKVSGLPHNKVCGMAGVLDSSRFRTFIAQHFG 163 (317)
T ss_dssp SCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHH----HHHHHHHCCCGGGEEESCHHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHHHHH----HHHHHhhCCCHHHEEeccCcHHHHHHHHHHHHHhC
Confidence 68999999999999999999999999999999999999975 466778899999999996 6999999999999999
Q ss_pred CCCCccccceeccCCCCceeecccCCCCC----C------CCCHHHHHHHHHHHHHH-HHHhh--cccccCCccchHH-H
Q psy9933 80 LNPTDVNVPVIGGHAGITIIPLISQATPS----V------SFPDDQLKALTGRIQEA-VSLKN--GIEKNLGLGKLSD-F 145 (208)
Q Consensus 80 v~~~~v~~~ViGeH~g~~~vp~~S~~~~~----~------~~~~~~~~~l~~~v~~~-~~~~~--~k~~~~g~~~~~~-~ 145 (208)
+++++++++|+|+| |++++|+||.++.. . .++.++++++.++++.+ +++.. |+ |++.|++ .
T Consensus 164 ~~~~~v~~~v~g~H-g~~~~~~~~~a~v~g~~~~~~~~~g~~~~~~id~~~~~~~~~~~ei~~~~g~----g~~~~~~a~ 238 (317)
T 2ewd_A 164 VNASDVSANVIGGH-GDGMVPATSSVSVGGVPLSSFIKQGLITQEQIDEIVCHTRIAWKEVADNLKT----GTAYFAPAA 238 (317)
T ss_dssp SCGGGEECCEEBCS-STTCEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHSS----SCCCHHHHH
T ss_pred cChhhceEEEEecC-CCceeEEeeccccCCEEHHHHHhccCCCHHHHHHHHHHHHhhHHHHHHhhcC----CchHHHHHH
Confidence 99999999999999 89999999998521 0 15777888898888777 55544 77 9999999 9
Q ss_pred HHHHHHhhhc-C--------------C-CCcEEEe----ecCCeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy9933 146 EKERQQFSPF-I--------------K-TFASFFS----PQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKGE 202 (208)
Q Consensus 146 a~~~~i~ai~-~--------------~-~~~~~~s----ig~~Gv~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~~~ 202 (208)
++++++++|+ | + -+++||| +|++|+++++++ +|+++|+++|++|++.|++.+++..
T Consensus 239 a~~~~~~ai~~~~~~~~~~~~~~~G~~g~~~~~~~~P~~i~~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~~~ 314 (317)
T 2ewd_A 239 AAVKMAEAYLKDKKAVVPCSAFCSNHYGVKGIYMGVPTIIGKNGVEDILEL-DLTPLEQKLLGESINEVNTISKVLD 314 (317)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEEESSSTTCSSEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCeEEEEEEEecCccCCcceEEEeEEEEcCCeeEEecCC-CCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999986 1 1 1578999 999999999998 8999999999999999999998763
No 38
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=99.97 E-value=1.3e-29 Score=220.40 Aligned_cols=193 Identities=21% Similarity=0.290 Sum_probs=164.4
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhC-CCeEEEEeCCCccccHHHHHHHHHHcC-CCCCCCeEEeehhhHHHHHHHHHHHh
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVA-PKALIGIISNPVNSTVPIAAEVLKKAG-VFDPRRLFGVTTLDIVRANTFVAEAK 78 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~-p~~iiivvtNPvD~~~~~~~~~~~~~~-~~~~~~ViG~~~LDs~R~~~~la~~l 78 (208)
++|++++..|+.+++++++.+.+++ |+++++++|||+|++++ +.++.+ ++||+++.|.+.||+.|+++++++++
T Consensus 96 ~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~----~~~~~~~~~~p~~~yg~tkl~~er~~~~~a~~~ 171 (327)
T 1y7t_A 96 MERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNAL----IAYKNAPGLNPRNFTAMTRLDHNRAKAQLAKKT 171 (327)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHH----HHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHH----HHHHHcCCCChhheeccchHHHHHHHHHHHHHh
Confidence 5799999999999999999999998 99999999999998765 455666 79999999998999999999999999
Q ss_pred CCCCCccc-cceeccCCCCceeecccCCCC----CCCC-CHHH-HHHHHHHHHHH-HHHhhcccccCCccch-HH-HHHH
Q psy9933 79 GLNPTDVN-VPVIGGHAGITIIPLISQATP----SVSF-PDDQ-LKALTGRIQEA-VSLKNGIEKNLGLGKL-SD-FEKE 148 (208)
Q Consensus 79 ~v~~~~v~-~~ViGeH~g~~~vp~~S~~~~----~~~~-~~~~-~~~l~~~v~~~-~~~~~~k~~~~g~~~~-~~-~a~~ 148 (208)
|+++..++ .+|+|+| +++++|.|+++.. ...+ ++++ .+++.++++++ +++.++| |.+.+ ++ .|++
T Consensus 172 g~~~~~vr~~~V~G~h-~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~v~~~g~~ii~~k----g~~~~~~~a~a~~ 246 (327)
T 1y7t_A 172 GTGVDRIRRMTVWGNH-SSTMFPDLFHAEVDGRPALELVDMEWYEKVFIPTVAQRGAAIIQAR----GASSAASAANAAI 246 (327)
T ss_dssp TCCGGGEECCEEEBCS-STTCEEECSSCEETTEEGGGTSCHHHHHHTHHHHHHHHHHHHHHHH----SSCCHHHHHHHHH
T ss_pred CcChhheeeeEEEcCC-CCeEEEEeeeeeeCCeeHHHhccchhHHHHHHHHHHHHHHHHHHcc----CCCchHHHHHHHH
Confidence 99999999 5789999 7899999999863 2233 4333 57899999998 6665555 55544 56 8999
Q ss_pred HHHhhhc-C------------------CCCcEEEe----ecCCeeEEecc-CCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy9933 149 RQQFSPF-I------------------KTFASFFS----PQKNGIEKNLG-LGKLSDFEKELVKAAVPELKKNIAKGEEF 204 (208)
Q Consensus 149 ~~i~ai~-~------------------~~~~~~~s----ig~~Gv~~i~~-lp~L~~~E~~~l~~sa~~l~~~i~~~~~~ 204 (208)
+++++|+ | .++++||| + ++|++++++ + +|+++|+++|++|++.|++.++.+.++
T Consensus 247 ~~~~~i~~~~~~~~~~~~~~~~~g~yg~~~~~~~~~P~~i-~~G~~~i~~~~-~l~~~e~~~l~~s~~~l~~~~~~~~~~ 324 (327)
T 1y7t_A 247 EHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTA-KDGAYRVVEGL-EINEFARKRMEITAQELLDEMEQVKAL 324 (327)
T ss_dssp HHHHHHHTBCCTTCCEEEEEECSSGGGCCTTSEEEEEEEE-ETTEEEECCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCCCeEEEEEEEecCccCCCCCeEEEEEEEE-cCCeEEecCCC-CCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999986 2 13578999 8 999999988 8 899999999999999999999988653
No 39
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=99.96 E-value=2.7e-28 Score=210.41 Aligned_cols=191 Identities=23% Similarity=0.337 Sum_probs=164.9
Q ss_pred CCHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEee-hhhHHHHHHHHHHHhC
Q psy9933 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVT-TLDIVRANTFVAEAKG 79 (208)
Q Consensus 1 ~sR~dl~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~-~LDs~R~~~~la~~l~ 79 (208)
|+|+|++..|+++++++++.+.+++|++++++++||+|.+++ ++++.+++|++||+|.+ .+|+.|++..+++.++
T Consensus 91 ~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~~~~~~----~~~~~~~~~~~~vig~~~~l~~~r~~~~~a~~~~ 166 (319)
T 1lld_A 91 QSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVDIATH----VAQKLTGLPENQIFGSGTNLDSARLRFLIAQQTG 166 (319)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHH----HHHHHHTCCTTSEEECTTHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCchHHHHH----HHHHhcCCCHHHEeeccccHhHHHHHHHHHHHhC
Confidence 689999999999999999999999999999999999999754 56777789999999995 6999999999999999
Q ss_pred CCCCccccceeccCCCCceeecccCCCCC----CC---------CCHHHHHHHHHHHHHH-HHHhhcccccCCccchHH-
Q psy9933 80 LNPTDVNVPVIGGHAGITIIPLISQATPS----VS---------FPDDQLKALTGRIQEA-VSLKNGIEKNLGLGKLSD- 144 (208)
Q Consensus 80 v~~~~v~~~ViGeH~g~~~vp~~S~~~~~----~~---------~~~~~~~~l~~~v~~~-~~~~~~k~~~~g~~~~~~- 144 (208)
+++.+++++++|+| |++++|+||.+... .. .+++.++++.+++++. .++...+ |++.+++
T Consensus 167 v~~~~v~~~~~G~~-g~~~~~~w~k~~in~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~e~~~v~~~~----G~~~~~~a 241 (319)
T 1lld_A 167 VNVKNVHAYIAGEH-GDSEVPLWESATIGGVPMSDWTPLPGHDPLDADKREEIHQEVKNAAYKIINGK----GATNYAIG 241 (319)
T ss_dssp CCGGGEECCEEBSS-STTCEECTTSCEETTEEGGGCCCCTTCCCCCHHHHHHHHHHHHHHHHHHHTSC----CSCCHHHH
T ss_pred CCHHHeEEEEEeCC-CCceeeeeecceECCccHHHHHhccccccCCHHHHHHHHHHHHHhhHhhhhCC----CCchHHHH
Confidence 99999999999999 89999999997521 11 1334478888888887 6666677 8888999
Q ss_pred HHHHHHHhhhc-CC---------------CCcEEEe----ecCCeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9933 145 FEKERQQFSPF-IK---------------TFASFFS----PQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKG 201 (208)
Q Consensus 145 ~a~~~~i~ai~-~~---------------~~~~~~s----ig~~Gv~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~~ 201 (208)
.+..+|+++|+ +. ..+.+++ ++++|+++++++ +|+++|+++|++|++.|++.+++.
T Consensus 242 ~~~~sm~~di~~~~~~ei~~s~~~~G~~~~~~~~~gvp~~~~~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~~ 317 (319)
T 1lld_A 242 MSGVDIIEAVLHDTNRILPVSSMLKDFHGISDICMSVPTLLNRQGVNNTINT-PVSDKELAALKRSAETLKETAAQF 317 (319)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEECSSBTTBCSSEEEEEEEEETTEEECCSCC-CCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCcEEEEEEEecCcCCccceEEEEEEEEeCCeeEEEcCC-CCCHHHHHHHHHHHHHHHHHHHHh
Confidence 88999999985 11 1356777 999999999998 899999999999999999988753
No 40
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=99.95 E-value=2.1e-27 Score=213.40 Aligned_cols=181 Identities=14% Similarity=0.049 Sum_probs=148.2
Q ss_pred HHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEeeh-hhHHHHHHHHHHHhCCCCCc
Q psy9933 6 LFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVTT-LDIVRANTFVAEAKGLNPTD 84 (208)
Q Consensus 6 l~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~~-LDs~R~~~~la~~l~v~~~~ 84 (208)
++.+|++|++++++.|+++| +|++|++|||+|++| +++++.+ |++||||+++ ++ |+++++|+.+|++|++
T Consensus 114 ~~~rni~i~~~i~~~i~~~~-~A~lin~TNPvdi~t----~a~~k~~--p~~rviG~c~~~~--r~~~~la~~lgv~~~~ 184 (417)
T 1up7_A 114 AALRAFPIVEEYVDTVRKTS-NATIVNFTNPSGHIT----EFVRNYL--EYEKFIGLCNVPI--NFIREIAEMFSARLED 184 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-CCEEEECSSSHHHHH----HHHHHTT--CCSSEEECCSHHH--HHHHHHHHHTTCCGGG
T ss_pred HhhccHHHHHHHHHHHHHHC-CEEEEEeCChHHHHH----HHHHHhC--CCCCEEEeCCCHH--HHHHHHHHHhCCCHHH
Confidence 46899999999999999999 999999999999975 5778876 8889999974 75 9999999999999999
Q ss_pred cccceec-----------cCCCCceeecccCC---CCC----CCC---------------------CHHHHHHH------
Q psy9933 85 VNVPVIG-----------GHAGITIIPLISQA---TPS----VSF---------------------PDDQLKAL------ 119 (208)
Q Consensus 85 v~~~ViG-----------eH~g~~~vp~~S~~---~~~----~~~---------------------~~~~~~~l------ 119 (208)
|+++|+| +| |++++|.||.. .+. ..+ +++..+++
T Consensus 185 v~~~v~GlNH~~w~~~~~~h-G~d~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~y~~~y~~~~~~~~~~~~~~~r 263 (417)
T 1up7_A 185 VFLKYYGLNHLSFIEKVFVK-GEDVTEKVFENLKLKLSNIPDEDFPTWFYDSVRLIVNPYLRYYLMEKKMFKKISTHELR 263 (417)
T ss_dssp EEEEEEEETTEEEEEEEEET-TEECHHHHHHHHTTC---CCTTSCCHHHHHHHCSEECGGGHHHHTHHHHHHHHHTSCCH
T ss_pred CeEEEEeecceeeEEEeecC-CcEehhhHHHHHHHhhCCCcCCchHHHHHHhcCCCccchhhhccCCHHHHHhccccchH
Confidence 9999999 99 99999999985 210 012 22333444
Q ss_pred ---HHHHHHH-HHHh----------hcccccCCccchHHHHHHHHHhhhc------------------CCCCcEEEe---
Q psy9933 120 ---TGRIQEA-VSLK----------NGIEKNLGLGKLSDFEKERQQFSPF------------------IKTFASFFS--- 164 (208)
Q Consensus 120 ---~~~v~~~-~~~~----------~~k~~~~g~~~~~~~a~~~~i~ai~------------------~~~~~~~~s--- 164 (208)
.++++++ +++. .+| |+|.++ .++++|+++|+ +.|.++|++
T Consensus 264 ~~~~~~~~~~~~~i~~~~~~~~~~l~~k----g~t~~~-~~a~~ii~AI~~d~~~~~~vsv~n~G~i~~lp~d~~vevP~ 338 (417)
T 1up7_A 264 AREVMKIEKELFEKYRTAVEIPEELTKR----GGSMYS-TAAAHLIRDLETDEGKIHIVNTRNNGSIENLPDDYVLEIPC 338 (417)
T ss_dssp HHHHHHHHHHHHHHHTTCSSCCGGGGGS----TTTTHH-HHHHHHHHHHHSSSCEEEEEEEECTTSSTTSCTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHhhcccchhhhhc----CCcHHH-HHHHHHHHHHHcCCCeEEEEEEecCCccCCCCCCeEEEEeE
Confidence 4666665 5554 355 666444 88899999995 124788998
Q ss_pred -ecCCeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy9933 165 -PQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKGE 202 (208)
Q Consensus 165 -ig~~Gv~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~~~ 202 (208)
||++||+++... +|+++|+++|+.++...+..++.++
T Consensus 339 ~vg~~Gi~~i~~~-~L~~~e~~~l~~~~~~e~l~veA~~ 376 (417)
T 1up7_A 339 YVRSGRVHTLSQG-KGDHFALSFIHAVKMYERLTIEAYL 376 (417)
T ss_dssp EEETTEEEEBCCC-CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCceEEeecC-CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988 7999999999999999999888774
No 41
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=99.95 E-value=5.8e-27 Score=212.26 Aligned_cols=189 Identities=14% Similarity=0.116 Sum_probs=143.2
Q ss_pred HHHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEeehhhHHHHHHHHHHHhCCCCCc
Q psy9933 5 DLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVTTLDIVRANTFVAEAKGLNPTD 84 (208)
Q Consensus 5 dl~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~~LDs~R~~~~la~~l~v~~~~ 84 (208)
+++.+|++|++++++.|+++||+|++|++|||+|++| +++++.+ |++||||+++.. .|+++++|+.+|++|++
T Consensus 123 ~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPvdivT----~a~~k~~--p~~rViG~c~~~-~r~~~~la~~lgv~~~~ 195 (450)
T 1s6y_A 123 FKGLRTIPVILDIIRDMEELCPDAWLINFTNPAGMVT----EAVLRYT--KQEKVVGLCNVP-IGMRMGVAKLLGVDADR 195 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHH----HHHHHHC--CCCCEEECCSHH-HHHHHHHHHHHTSCGGG
T ss_pred HHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHH----HHHHHhC--CCCCEEEeCCcH-HHHHHHHHHHhCCCHHH
Confidence 4589999999999999999999999999999999974 5778876 888999997532 49999999999999999
Q ss_pred cccceec-----------cCCCCceeecccCCCCC-------------CCCC---------------------HHH----
Q psy9933 85 VNVPVIG-----------GHAGITIIPLISQATPS-------------VSFP---------------------DDQ---- 115 (208)
Q Consensus 85 v~~~ViG-----------eH~g~~~vp~~S~~~~~-------------~~~~---------------------~~~---- 115 (208)
|+++|+| +| |++++|.||..... ..+. ++.
T Consensus 196 v~~~v~GlNH~~w~~~v~~~-G~d~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~p~~y~~yy~~~~~~~~~~ 274 (450)
T 1s6y_A 196 VHIDFAGLNHMVFGLHVYLD-GVEVTEKVIDLVAHPDRSGVTMKNIVDLGWEPDFLKGLKVLPCPYHRYYFQTDKMLAEE 274 (450)
T ss_dssp EEEEEEEETTEEEEEEEEET-TEECHHHHHHHHSCC------------CCCCHHHHHHHCSBCCGGGHHHHSHHHHHHHH
T ss_pred cEEEEEeeecceeEEEeeeC-CcCchHhHHHHHhhhccccccccccccCccHHHHHHhcCCccchhhhhhcCCHHHHHhh
Confidence 9999999 99 99999999873210 0111 221
Q ss_pred ---------HHHHHHHHHHH-HHHh-----hcccccC-CccchHH-HHHHHHHhhhc-C-----------------CCCc
Q psy9933 116 ---------LKALTGRIQEA-VSLK-----NGIEKNL-GLGKLSD-FEKERQQFSPF-I-----------------KTFA 160 (208)
Q Consensus 116 ---------~~~l~~~v~~~-~~~~-----~~k~~~~-g~~~~~~-~a~~~~i~ai~-~-----------------~~~~ 160 (208)
+.++.++++++ +++. .+|...+ +.+.+++ .++++|+++|+ | .|.+
T Consensus 275 ~~~~~~~~~r~~~~~~~~~~~~ei~~~~~~~~k~~~~~~~~~~~~~~~a~~ii~AI~~d~~~~~~vsv~n~G~i~~lp~d 354 (450)
T 1s6y_A 275 LEAAKTKGTRAEVVQQLEKELFELYKDPNLAIKPPQLEKRGGAYYSDAACSLISSIYNDKRDIQPVNTRNNGAIASISAE 354 (450)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHTTTTCC-----------CCSCCHHHHHHHHHHHHHHTCCCEEEEEEECTTSBTTSCTT
T ss_pred hccccccchHHHHHHHHHHHHHHHHhhhccccccchhhcccchHHHHHHHHHHHHHHcCCCeEEEEEeecCceecCCCCC
Confidence 12445556665 4444 3331011 1223355 88899999995 1 2478
Q ss_pred EEEe----ecCCeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy9933 161 SFFS----PQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKGE 202 (208)
Q Consensus 161 ~~~s----ig~~Gv~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~~~ 202 (208)
+|++ ||++||+++... +|+++|+++++.++..=+-.++.++
T Consensus 355 ~~vevP~vvg~~Gi~~i~~~-~L~~~e~~l~~~~~~~e~l~veAa~ 399 (450)
T 1s6y_A 355 SAVEVNCVITKDGPKPIAVG-DLPVAVRGLVQQIKSFERVAAEAAV 399 (450)
T ss_dssp SEEEEEEEEETTEEEECCCB-CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEeEEEcCCCeEEeecC-CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 8998 999999999998 7999999999999887776666553
No 42
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=99.92 E-value=5.8e-25 Score=200.11 Aligned_cols=184 Identities=15% Similarity=0.135 Sum_probs=138.7
Q ss_pred HHHHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEeeh-hhHHHHHHHHHHHhCCCC
Q psy9933 4 DDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVTT-LDIVRANTFVAEAKGLNP 82 (208)
Q Consensus 4 ~dl~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~~-LDs~R~~~~la~~l~v~~ 82 (208)
++++.+|++|++++++.|+++||+|++|++|||+|++| +++++.+ |++||||+++ ++ |+++++|+.+|++|
T Consensus 141 l~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~T----~~~~k~~--p~~rViG~c~~~~--r~~~~la~~lgv~~ 212 (472)
T 1u8x_X 141 IAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVA----EATRRLR--PNSKILNICDMPV--GIEDRMAQILGLSS 212 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCHHHHH----HHHHHHS--TTCCEEECCSHHH--HHHHHHHHHHTCSC
T ss_pred HHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHH----HHHHHhC--CCCCEEEeCCcHH--HHHHHHHHHhCcCc
Confidence 55689999999999999999999999999999999974 5778876 8889999975 64 99999999999998
Q ss_pred -Cccccceec-----------c-CCCCceeecccCCC------C---C----CCCCHHH---------------------
Q psy9933 83 -TDVNVPVIG-----------G-HAGITIIPLISQAT------P---S----VSFPDDQ--------------------- 115 (208)
Q Consensus 83 -~~v~~~ViG-----------e-H~g~~~vp~~S~~~------~---~----~~~~~~~--------------------- 115 (208)
++|+++|+| + | |++++|.||... | . ..+..+-
T Consensus 213 ~~~v~~~v~GlNH~~W~~~~~~~h-G~d~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~Yl~y 291 (472)
T 1u8x_X 213 RKEMKVRYYGLNHFGWWTSIQDQE-GNDLMPKLKEHVSQYGYIPKTEAEAVEASWNDTFAKARDVQAADPDTLPNTYLQY 291 (472)
T ss_dssp GGGEEEEEEEETTEEEEEEEEETT-CCBCHHHHHHHHHHHSSCCCC-------CTTSHHHHHHHHHHTSTTSEECGGGHH
T ss_pred hhceeEEEeccchhhheeeeEeCC-CCEehHhHHHHHHhcCCCccccccccccchHHHHHhhcCccccccccCCccchhc
Confidence 999999999 8 9 999999998732 1 0 0011000
Q ss_pred ---HHHHHHH----------HHH-H----HHHhh-c--ccccCC---ccch---HH-HHHHHHHhhhc------------
Q psy9933 116 ---LKALTGR----------IQE-A----VSLKN-G--IEKNLG---LGKL---SD-FEKERQQFSPF------------ 155 (208)
Q Consensus 116 ---~~~l~~~----------v~~-~----~~~~~-~--k~~~~g---~~~~---~~-~a~~~~i~ai~------------ 155 (208)
.+++.++ +++ . +++.. + + | ++.+ ++ .++++|+++|+
T Consensus 292 y~~~~~~~e~~~~~~~r~~~v~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~a~~ii~AI~~d~~~v~~vsv~ 367 (472)
T 1u8x_X 292 YLFPDDMVKKSNPNHTRANEVMEGREAFIFSQCDMITRE----QSSENSEIKIDDHASYIVDLARAIAYNTGERMLLIVE 367 (472)
T ss_dssp HHSHHHHHTTSCSSSCHHHHHHHHTTTTTTTTHHHHHHH----TSCCSCSSCCCTTTHHHHHHHHHHHHTCCEEEEEEEE
T ss_pred ccCCHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhc----CCcccccccccHHHHHHHHHHHHHhcCCCeEEEEEee
Confidence 1222222 223 1 11110 2 3 3 3334 88 99999999995
Q ss_pred ------CCCCcEEEe----ecCCeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9933 156 ------IKTFASFFS----PQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKG 201 (208)
Q Consensus 156 ------~~~~~~~~s----ig~~Gv~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~~ 201 (208)
+.|.++|++ ||++||+.+... +|+++|+++++.-...=+-.++.+
T Consensus 368 n~G~i~glp~d~~veVP~vvg~~Gi~pi~~~-~Lp~~~~~l~~~~~~~e~l~veAa 422 (472)
T 1u8x_X 368 NNGAIANFDPTAMVEVPCIVGSNGPEPITVG-TIPQFQKGLMEQQVSVEKLTVEAW 422 (472)
T ss_dssp CTTSBTTSCTTSEEEEEEEEETTEEEECCCB-CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCceecCcCCCeEEEEeEEEcCCCceEeecC-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 124788998 999999999988 799999999887666555555544
No 43
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=99.64 E-value=1.6e-15 Score=137.09 Aligned_cols=78 Identities=26% Similarity=0.405 Sum_probs=70.4
Q ss_pred HhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEeehhhHHHHHHHHHHHh----C---CC
Q psy9933 9 TNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVTTLDIVRANTFVAEAK----G---LN 81 (208)
Q Consensus 9 ~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~~LDs~R~~~~la~~l----~---v~ 81 (208)
+|+++++++++.|+++||+|++|++|||+|++| +++++. +|++||||++..- .+++..+|+.| | ++
T Consensus 121 r~~~i~~~i~~~i~~~~p~a~~i~~tNPvdi~t----~~~~k~--~p~~rviG~C~~~-~~~~~~~a~~l~~~lg~~~~~ 193 (450)
T 3fef_A 121 RAVPIFAEIARAIRDYAPESWVINYTNPMSVCT----RVLYKV--FPGIKAIGCCHEV-FGTQKLLAEMVTERLGIEVPR 193 (450)
T ss_dssp HHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHH----HHHHHH--CTTCEEEECCSHH-HHHHHHHHHHHHHHHCCCCSC
T ss_pred ccHHHHHHHHHHHHHHCCCeEEEEecCchHHHH----HHHHHH--CCCCCEEEeCCcH-HHHHHHHHHHHHhhcCCCCCC
Confidence 899999999999999999999999999999975 466666 7899999997533 89999999999 5 77
Q ss_pred CCccccceec-cC
Q psy9933 82 PTDVNVPVIG-GH 93 (208)
Q Consensus 82 ~~~v~~~ViG-eH 93 (208)
+++|+..+.| +|
T Consensus 194 ~~~v~~~~~GlNH 206 (450)
T 3fef_A 194 REDIRVNVLGINH 206 (450)
T ss_dssp GGGEEEEEEEETT
T ss_pred hhHeEEEEeeecC
Confidence 9999999999 99
No 44
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=99.56 E-value=2.5e-15 Score=136.92 Aligned_cols=78 Identities=22% Similarity=0.268 Sum_probs=70.4
Q ss_pred HHHHhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEeeh-hhHHHHHHHHHHHhCCCCCc
Q psy9933 6 LFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVTT-LDIVRANTFVAEAKGLNPTD 84 (208)
Q Consensus 6 l~~~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~~-LDs~R~~~~la~~l~v~~~~ 84 (208)
++.+|++|++++++.|+++||+|++|++|||+|++| +++++ ||++||||+++ +|+ +++++ +.+|++|++
T Consensus 124 ~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~t----~~~~k---~p~~rviG~c~~~~~--~~~~l-~~lgv~~~~ 193 (480)
T 1obb_A 124 SNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEGT----TLVTR---TVPIKAVGFCHGHYG--VMEIV-EKLGLEEEK 193 (480)
T ss_dssp SCHHHHHHHHHHHHHHHHHCTTCEEEECSSCHHHHH----HHHHH---HSCSEEEEECSGGGH--HHHHH-HHTTCCGGG
T ss_pred HhhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHH----HHHHH---CCCCcEEecCCCHHH--HHHHH-HHhCCCHHH
Confidence 467999999999999999999999999999999975 56677 78999999975 775 78999 999999999
Q ss_pred cccceec-cC
Q psy9933 85 VNVPVIG-GH 93 (208)
Q Consensus 85 v~~~ViG-eH 93 (208)
|+++|+| +|
T Consensus 194 v~~~v~GlNH 203 (480)
T 1obb_A 194 VDWQVAGVNH 203 (480)
T ss_dssp EEEEEEEETT
T ss_pred ceEEEEeecc
Confidence 9999999 55
No 45
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=98.78 E-value=6.7e-09 Score=94.50 Aligned_cols=76 Identities=24% Similarity=0.321 Sum_probs=62.4
Q ss_pred HhHHHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEeehhhHHHHHHHHHHHhCCCCCccccc
Q psy9933 9 TNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVTTLDIVRANTFVAEAKGLNPTDVNVP 88 (208)
Q Consensus 9 ~Na~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~~LDs~R~~~~la~~l~v~~~~v~~~ 88 (208)
.|++++.++++.|+++||+|.+|+.|||++++|+ .+++.++ .|++|+-. +.+....+++.||+++++|+..
T Consensus 134 ~~i~v~~~i~~~i~~~~P~A~~in~tNP~~i~t~----a~~~~~~---~k~vGlC~--~~~~~~~~~~~Lg~~~~~v~~~ 204 (477)
T 3u95_A 134 PDVKLALEIAEKMKKMAPKAYLMQTANPVFEITQ----AVRRWTG---ANIIGFCH--GVAGVYEVFERLGLDPEEVDWQ 204 (477)
T ss_dssp HHHHHHHHHHHHHHHHCTTCEEEECSSCHHHHHH----HHHHHHC---CCEEEECC--GGGHHHHHHHHTTCCGGGEEEE
T ss_pred hhHHHHHHHHHHHHhhCCCeEEEEecChHHHHHH----HHHHhCC---CCeEEECC--CHHHHHHHHHHhCCCHHHcEEE
Confidence 5899999999999999999999999999999864 5667665 58999952 2223345777899999999999
Q ss_pred eeccC
Q psy9933 89 VIGGH 93 (208)
Q Consensus 89 ViGeH 93 (208)
+.|-+
T Consensus 205 ~~GlN 209 (477)
T 3u95_A 205 VAGVN 209 (477)
T ss_dssp EEEET
T ss_pred EeecC
Confidence 99955
No 46
>1bb1_A Designed, thermostable heterotrimeric coiled coil; de novo protein design; 1.80A {Synthetic construct} SCOP: k.7.1.1 PDB: 1bb1_C 1u0i_B
Probab=56.97 E-value=22 Score=19.50 Aligned_cols=27 Identities=26% Similarity=0.559 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy9933 181 DFEKELVKAAVPELKKNIAKGEEFVAK 207 (208)
Q Consensus 181 ~~E~~~l~~sa~~l~~~i~~~~~~~~~ 207 (208)
+.||..+++-...|++.+....+|++.
T Consensus 8 eyeqaaikeeiaaikdkiaaikeyiaa 34 (36)
T 1bb1_A 8 EYEQAAIKEEIAAIKDKIAAIKEYIAA 34 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 679999999999999999888887753
No 47
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=53.86 E-value=7.3 Score=33.08 Aligned_cols=48 Identities=17% Similarity=0.117 Sum_probs=32.6
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEee
Q psy9933 14 VRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVT 63 (208)
Q Consensus 14 v~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~ 63 (208)
++++...+.++|++..||-. -|.+++-++++ -....-|+||++|||+.
T Consensus 148 ~~~l~~~l~~~G~~v~ivSa-s~~~~v~~~a~-~~~~~ygIp~e~ViG~~ 195 (327)
T 4as2_A 148 QRELYNKLMENGIEVYVISA-AHEELVRMVAA-DPRYGYNAKPENVIGVT 195 (327)
T ss_dssp HHHHHHHHHHTTCEEEEEEE-EEHHHHHHHHT-CGGGSCCCCGGGEEEEC
T ss_pred HHHHHHHHHHCCCEEEEEeC-CcHHHHHHHHh-hcccccCCCHHHeEeee
Confidence 67888888889988555444 45788655321 11112589999999985
No 48
>1to0_A Hypothetical UPF0247 protein YYDA; structural genomics, unknown function, PSI, protein structure initiative; 2.50A {Bacillus subtilis} SCOP: c.116.1.3
Probab=53.10 E-value=74 Score=24.28 Aligned_cols=118 Identities=15% Similarity=0.207 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHHhCCCeEEEEeCCCc-------cccHHHHHHHHHHcCCCCCCC-eEEe---e-hhhHHHHHHHHHHHhC
Q psy9933 12 SIVRDIIKAVAEVAPKALIGIISNPV-------NSTVPIAAEVLKKAGVFDPRR-LFGV---T-TLDIVRANTFVAEAKG 79 (208)
Q Consensus 12 ~Iv~~i~~~i~~~~p~~iiivvtNPv-------D~~~~~~~~~~~~~~~~~~~~-ViG~---~-~LDs~R~~~~la~~l~ 79 (208)
+.+.++.+.+..|++=.++-|--.+. +.-...-.+--.-...+|++. ||.+ | .++|.-|...|.+...
T Consensus 18 ~~i~eY~kRl~~~~~lei~ev~~~k~~~~~~~~~~~~~~~~E~~~il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~ 97 (167)
T 1to0_A 18 QGIEEYTKRLSAYAKIDIIELPDEKAPENLSDQDMKIIKDKEGDRILSKISPDAHVIALAIEGKMKTSEELADTIDKLAT 97 (167)
T ss_dssp HHHHHHHHHHTTTSEEEEEEECCCCC---------CHHHHHHHHHHHTTSCTTSEEEEEEEEEEECCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCccCCceEEEecCccCccccccccHHHHHHHHHHHHHhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHh
Confidence 56889999999988755555543111 211100112222234466666 8877 5 5999999999998764
Q ss_pred CCCCccccceeccCCCCce-e-----ecccCCCCCCCCCHHH-HHHHHHHHHHHHHHhhc
Q psy9933 80 LNPTDVNVPVIGGHAGITI-I-----PLISQATPSVSFPDDQ-LKALTGRIQEAVSLKNG 132 (208)
Q Consensus 80 v~~~~v~~~ViGeH~g~~~-v-----p~~S~~~~~~~~~~~~-~~~l~~~v~~~~~~~~~ 132 (208)
-..+++ ++||||.-|=+. | -.||-.. ..|+..- +--+.+++-.++.+.+|
T Consensus 98 ~G~~~i-~FvIGGa~Gl~~~v~~rA~~~lSlS~--mTfpHqL~RliL~EQiYRA~tIl~g 154 (167)
T 1to0_A 98 YGKSKV-TFVIGGSLGLSDTVMKRADEKLSFSK--MTFPHQLMRLILVEQIYRAFRINRG 154 (167)
T ss_dssp TTCCEE-EEEECCSSCCCHHHHHHCSEEEESCS--SCCCHHHHHHHHHHHHHHHHHHHTS
T ss_pred cCCceE-EEEEECCCCCCHHHHHhhCcEEEccC--CCCcHHHHHHHHHHHHHHHHHHHCC
Confidence 443444 599998744321 1 1233321 2366554 23466666666555444
No 49
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=49.12 E-value=30 Score=18.70 Aligned_cols=27 Identities=22% Similarity=0.266 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy9933 181 DFEKELVKAAVPELKKNIAKGEEFVAK 207 (208)
Q Consensus 181 ~~E~~~l~~sa~~l~~~i~~~~~~~~~ 207 (208)
++|...|+..++.+++.++..++-+|+
T Consensus 5 ee~~r~l~~ivq~lq~r~drle~tvqa 31 (32)
T 2akf_A 5 EEDVRNLNAIVQKLQERLDRLEETVQA 31 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 577889999999999999988876654
No 50
>3ohe_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.20A {Marinobacter aquaeolei}
Probab=47.52 E-value=68 Score=23.25 Aligned_cols=44 Identities=14% Similarity=0.255 Sum_probs=29.4
Q ss_pred CCccccceeccCCCCcee--ecccCCCCCCCCCHHHHHHHHHHHHHH
Q psy9933 82 PTDVNVPVIGGHAGITII--PLISQATPSVSFPDDQLKALTGRIQEA 126 (208)
Q Consensus 82 ~~~v~~~ViGeH~g~~~v--p~~S~~~~~~~~~~~~~~~l~~~v~~~ 126 (208)
...++.-||+...||... |.|.... ...+++++++++.+++|.+
T Consensus 87 V~HlH~HviPR~~~D~~~p~~vw~~~~-~~~~~~eel~~~~~~ir~~ 132 (137)
T 3ohe_A 87 VPQLHLHHIVRYQGDPAWPGPVWGKQP-PVPYTEEQQASVKAKLQPL 132 (137)
T ss_dssp CCSCCEEEEEECTTSTTTTSCCTTSSC-CCCCCHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCCCCCCCcccccCCC-CCCCCHHHHHHHHHHHHHH
Confidence 345566667766666655 5675422 2347889999999998865
No 51
>1ufz_A Hypothetical protein BAB28515; HBS1-like domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, translatio; NMR {Mus musculus} SCOP: a.5.9.1
Probab=44.69 E-value=10 Score=25.86 Aligned_cols=22 Identities=9% Similarity=0.336 Sum_probs=19.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHHH
Q psy9933 177 GKLSDFEKELVKAAVPELKKNI 198 (208)
Q Consensus 177 p~L~~~E~~~l~~sa~~l~~~i 198 (208)
|.|++.++++|..+..+||+.+
T Consensus 24 ~~Ls~~d~arL~SCLd~iR~Vl 45 (83)
T 1ufz_A 24 HQLSEIDQARLYSCLDHMREVL 45 (83)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHT
T ss_pred ccCCHHHHHHHHHHHHHHHHHH
Confidence 4699999999999999999854
No 52
>1bb1_B Designed, thermostable heterotrimeric coiled coil; de novo protein design; 1.80A {Synthetic construct} SCOP: k.7.1.1
Probab=44.45 E-value=39 Score=18.54 Aligned_cols=24 Identities=17% Similarity=0.354 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy9933 181 DFEKELVKAAVPELKKNIAKGEEFV 205 (208)
Q Consensus 181 ~~E~~~l~~sa~~l~~~i~~~~~~~ 205 (208)
.+|++.+++-.+.|++.+... +|+
T Consensus 8 keeqaaieeeiqaikeeiaai-kyl 31 (36)
T 1bb1_B 8 KEEQAAIEEEIQAIKEEIAAI-KYL 31 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 578999999999999987654 444
No 53
>1l6x_B Minimized B-domain of protein A Z34C; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: k.13.1.1 PDB: 1oqo_C* 1oqx_C* 1zdc_A 1zdd_A
Probab=43.74 E-value=11 Score=21.11 Aligned_cols=20 Identities=10% Similarity=0.076 Sum_probs=15.2
Q ss_pred eccCCCCCHHHHHHHHHHHH
Q psy9933 173 NLGLGKLSDFEKELVKAAVP 192 (208)
Q Consensus 173 i~~lp~L~~~E~~~l~~sa~ 192 (208)
++.+|.|||+++..+-+|.+
T Consensus 12 vLh~~nLtEeQrn~yI~slk 31 (34)
T 1l6x_B 12 ALHDPNLNEEQRNAKIKSIR 31 (34)
T ss_dssp HHHCTTCCHHHHHHHHHHHH
T ss_pred HHcCCCCCHHHHHhHHHHHh
Confidence 45678999999988766643
No 54
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on Pro structural and functional analyses; 2.10A {Pyrococcus horikoshii}
Probab=38.34 E-value=53 Score=26.22 Aligned_cols=70 Identities=21% Similarity=0.252 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEeeh-h---hHHHHHHHHHHHhCCCCCcc
Q psy9933 12 SIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVTT-L---DIVRANTFVAEAKGLNPTDV 85 (208)
Q Consensus 12 ~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~~-L---Ds~R~~~~la~~l~v~~~~v 85 (208)
++.+.+...|.+++.+.+++-+|==+|..+. ++++++..| +.+|++++. . ++...-..+++.+|++-..+
T Consensus 8 ~~~~~l~~~i~~~~~~~vvv~lSGGiDSs~~--~~l~~~~~g--~~~v~av~~~~~~~~~~~~a~~~a~~lgi~~~~i 81 (257)
T 2e18_A 8 KVIERILEFIREKGNNGVVIGISGGVDSATV--AYLATKALG--KEKVLGLIMPYFENKDVEDAKLVAEKLGIGYKVI 81 (257)
T ss_dssp HHHHHHHHHHHHHCTTCEEEECCSSHHHHHH--HHHHHHHHC--GGGEEEEECCSSCSTHHHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHHHHhCCCcEEEEecCCHHHHHH--HHHHHHhcC--CCcEEEEEeCCCCchHHHHHHHHHHHhCCCEEEE
Confidence 4566777777777778899999999999763 456666643 457887742 1 56666778889998754433
No 55
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=37.69 E-value=44 Score=27.55 Aligned_cols=50 Identities=6% Similarity=0.078 Sum_probs=36.6
Q ss_pred ehhhHHHHHHHHHHHhCCCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH
Q psy9933 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA 126 (208)
Q Consensus 63 ~~LDs~R~~~~la~~l~v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~ 126 (208)
+.+|-..++.++...+. ..|++.++.++.|+.. .++.+|+.++.+.+.+.
T Consensus 16 g~iD~~~l~~lv~~li~---~Gv~gl~~~GttGE~~-----------~Ls~~Er~~v~~~~~~~ 65 (294)
T 2ehh_A 16 GEVDYEALGNLIEFHVD---NGTDAILVCGTTGESP-----------TLTFEEHEKVIEFAVKR 65 (294)
T ss_dssp TEECHHHHHHHHHHHHT---TTCCEEEESSTTTTGG-----------GSCHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHH---CCCCEEEECccccChh-----------hCCHHHHHHHHHHHHHH
Confidence 45888888888877653 4678887777767653 37788888888877764
No 56
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=35.88 E-value=43 Score=27.65 Aligned_cols=50 Identities=8% Similarity=0.095 Sum_probs=35.9
Q ss_pred ehhhHHHHHHHHHHHhCCCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH
Q psy9933 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA 126 (208)
Q Consensus 63 ~~LDs~R~~~~la~~l~v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~ 126 (208)
+.+|-..++.++...+. ..|++.++.++.|+.. .++.+|+.++.+.+.+.
T Consensus 23 g~iD~~~l~~lv~~li~---~Gv~gl~~~GttGE~~-----------~Ls~~Er~~v~~~~~~~ 72 (297)
T 3flu_A 23 GSIHYEQLRDLIDWHIE---NGTDGIVAVGTTGESA-----------TLSVEEHTAVIEAVVKH 72 (297)
T ss_dssp SCBCHHHHHHHHHHHHH---TTCCEEEESSTTTTGG-----------GSCHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHH---cCCCEEEeCccccCcc-----------cCCHHHHHHHHHHHHHH
Confidence 46888888888776653 5678777776757653 37788888888877664
No 57
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=35.10 E-value=43 Score=27.77 Aligned_cols=50 Identities=14% Similarity=0.151 Sum_probs=35.5
Q ss_pred ehhhHHHHHHHHHHHhCCCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH
Q psy9933 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA 126 (208)
Q Consensus 63 ~~LDs~R~~~~la~~l~v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~ 126 (208)
+.+|...++.++...+. ..|++.++.++.|+.. .++.+|+.++.+.+.+.
T Consensus 27 g~iD~~~l~~lv~~li~---~Gv~Gl~v~GtTGE~~-----------~Ls~eEr~~v~~~~~~~ 76 (303)
T 2wkj_A 27 QALDKASLRRLVQFNIQ---QGIDGLYVGGSTGEAF-----------VQSLSEREQVLEIVAEE 76 (303)
T ss_dssp SSBCHHHHHHHHHHHHH---TTCSEEEESSTTTTGG-----------GSCHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHH---cCCCEEEECeeccChh-----------hCCHHHHHHHHHHHHHH
Confidence 45888888888776653 4578777776657653 37788888888877764
No 58
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=34.47 E-value=41 Score=27.66 Aligned_cols=50 Identities=12% Similarity=0.136 Sum_probs=36.0
Q ss_pred ehhhHHHHHHHHHHHhCCCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH
Q psy9933 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA 126 (208)
Q Consensus 63 ~~LDs~R~~~~la~~l~v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~ 126 (208)
+.+|-..++.++..... ..|++.++.++.|+.. .++.+|+.++.+.+.+.
T Consensus 16 g~iD~~~l~~lv~~li~---~Gv~gl~~~GttGE~~-----------~Ls~~Er~~v~~~~~~~ 65 (289)
T 2yxg_A 16 KEVDFDGLEENINFLIE---NGVSGIVAVGTTGESP-----------TLSHEEHKKVIEKVVDV 65 (289)
T ss_dssp TEECHHHHHHHHHHHHH---TTCSEEEESSTTTTGG-----------GSCHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHH---CCCCEEEECccccChh-----------hCCHHHHHHHHHHHHHH
Confidence 45888888887776653 4678877777767653 37788888888877764
No 59
>1o6d_A Hypothetical UPF0247 protein TM0844; structural genomics, unknown function; 1.66A {Thermotoga maritima} SCOP: c.116.1.3
Probab=33.77 E-value=1.4e+02 Score=22.54 Aligned_cols=119 Identities=13% Similarity=0.172 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEeCCCc-cccHHHHHHHHHHcCCCCCCC-eEEe---e-hhhHHHHHHHHHHHhCCCCCc
Q psy9933 11 ASIVRDIIKAVAEVAPKALIGIISNPV-NSTVPIAAEVLKKAGVFDPRR-LFGV---T-TLDIVRANTFVAEAKGLNPTD 84 (208)
Q Consensus 11 a~Iv~~i~~~i~~~~p~~iiivvtNPv-D~~~~~~~~~~~~~~~~~~~~-ViG~---~-~LDs~R~~~~la~~l~v~~~~ 84 (208)
.+.+.++.+.+.+|++=-++-+--.|. +.-.-.-.+--.-...+|++. ||.+ | .++|.-|...|.+...-. ++
T Consensus 18 ~~~i~eY~kRl~~~~~lei~ev~~~k~~~~~~~~~~E~~~il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~G-~~ 96 (163)
T 1o6d_A 18 KEGIKHYEKFLRRFCKPEVLEIKRVHRGSIEEIVRKETEDLTNRILPGSFVMVMDKRGEEVSSEEFADFLKDLEMKG-KD 96 (163)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEECCCCCSCHHHHHHHHHHHHHTTCCTTCEEEEEEEEEEECCHHHHHHHHHHHHHHT-CC
T ss_pred HHHHHHHHHHcCccCCceEEEecCcccccHHHHHHHHHHHHHHhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcC-Ce
Confidence 357889999999988755555544332 110000111122234466665 7877 5 599999999999875444 44
Q ss_pred cccceeccCCCCceeecccCCC-----CCCCCCHHH-HHHHHHHHHHHHHHhhc
Q psy9933 85 VNVPVIGGHAGITIIPLISQAT-----PSVSFPDDQ-LKALTGRIQEAVSLKNG 132 (208)
Q Consensus 85 v~~~ViGeH~g~~~vp~~S~~~-----~~~~~~~~~-~~~l~~~v~~~~~~~~~ 132 (208)
+ ++||||.-|=+. -+..++. ....|+..- +--+.+++-.++.+.+|
T Consensus 97 i-~FvIGGa~Gl~~-~v~~rAd~~lSlS~mTfpHqL~RliL~EQiYRA~tIl~g 148 (163)
T 1o6d_A 97 I-TILIGGPYGLNE-EIFAKAHRVFSLSKMTFTHGMTVLIVLEQIFRAFKIIHG 148 (163)
T ss_dssp E-EEEECCTTCCCG-GGGGGCSEEEECCSSCCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred E-EEEEECCCCCCH-HHHHhhCceEEccCCCCcHHHHHHHHHHHHHHHHHHHCC
Confidence 4 599998743221 1112221 002366554 23466666666454443
No 60
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=33.47 E-value=50 Score=27.20 Aligned_cols=50 Identities=16% Similarity=0.121 Sum_probs=36.7
Q ss_pred ehhhHHHHHHHHHHHhCCCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH
Q psy9933 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA 126 (208)
Q Consensus 63 ~~LDs~R~~~~la~~l~v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~ 126 (208)
+.+|-..++.++...+. ..|++.++.++.|+.. .++.+|+.++.+.+.+.
T Consensus 19 g~iD~~~l~~lv~~li~---~Gv~gl~~~GttGE~~-----------~Ls~~Er~~v~~~~~~~ 68 (294)
T 3b4u_A 19 GTVDIDAMIAHARRCLS---NGCDSVTLFGTTGEGC-----------SVGSRERQAILSSFIAA 68 (294)
T ss_dssp SSBCHHHHHHHHHHHHH---TTCSEEEESSTTTTGG-----------GSCHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHH---cCCCEEEECccccChh-----------hCCHHHHHHHHHHHHHH
Confidence 46888888888776653 3578777777767653 37889999998888764
No 61
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=33.12 E-value=52 Score=27.30 Aligned_cols=50 Identities=16% Similarity=0.205 Sum_probs=36.2
Q ss_pred ehhhHHHHHHHHHHHhCCCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH
Q psy9933 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA 126 (208)
Q Consensus 63 ~~LDs~R~~~~la~~l~v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~ 126 (208)
+.+|-..++.++...+. ..|++.++.++.|+.. .++.+|+.++.+.+.+.
T Consensus 32 g~iD~~~l~~lv~~li~---~Gv~gl~v~GttGE~~-----------~Ls~~Er~~v~~~~~~~ 81 (304)
T 3cpr_A 32 GDIDIAAGREVAAYLVD---KGLDSLVLAGTTGESP-----------TTTAAEKLELLKAVREE 81 (304)
T ss_dssp SCBCHHHHHHHHHHHHH---TTCCEEEESSTTTTTT-----------TSCHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHH---cCCCEEEECccccChh-----------hCCHHHHHHHHHHHHHH
Confidence 45888888888876653 3578777776657642 47888888888887764
No 62
>3uan_A Heparan sulfate glucosamine 3-O-sulfotransferase; alpha/beta motif, CO-FACT PAPS/PAP, heparan sulfate oligosaccharides, golgi-localized transferase; HET: A3P NGY BDP SGN IDS; 1.84A {Mus musculus} PDB: 1vkj_A* 1zrh_A*
Probab=32.87 E-value=24 Score=28.86 Aligned_cols=25 Identities=12% Similarity=0.321 Sum_probs=19.2
Q ss_pred HHHHHHHhCCCeEEEEeC-CCccccH
Q psy9933 17 IIKAVAEVAPKALIGIIS-NPVNSTV 41 (208)
Q Consensus 17 i~~~i~~~~p~~iiivvt-NPvD~~~ 41 (208)
....|.+..|++++|++. ||+|...
T Consensus 91 ~~~~i~~~~P~aKiI~vlRnPvDra~ 116 (269)
T 3uan_A 91 VPERIHSMNPTIRLLLILRDPSERVL 116 (269)
T ss_dssp HHHHHHHHCTTCEEEEEECCHHHHHH
T ss_pred HHHHHHHhCCCCcEEEEEcCHHHHHH
Confidence 456788889999555555 9999974
No 63
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=32.74 E-value=39 Score=28.15 Aligned_cols=50 Identities=20% Similarity=0.143 Sum_probs=36.7
Q ss_pred ehhhHHHHHHHHHHHhCCCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH
Q psy9933 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA 126 (208)
Q Consensus 63 ~~LDs~R~~~~la~~l~v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~ 126 (208)
+.+|-..++.++...+. ..|++.+++|+.|+.. .++.+|+.++.+.+.+.
T Consensus 24 g~iD~~~l~~lv~~li~---~Gv~gl~v~GtTGE~~-----------~Ls~~Er~~v~~~~~~~ 73 (309)
T 3fkr_A 24 GDLDLASQKRAVDFMID---AGSDGLCILANFSEQF-----------AITDDERDVLTRTILEH 73 (309)
T ss_dssp SSBCHHHHHHHHHHHHH---TTCSCEEESSGGGTGG-----------GSCHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHH---cCCCEEEECccccCcc-----------cCCHHHHHHHHHHHHHH
Confidence 46889999888877653 5678777766657643 37788888888887764
No 64
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=32.62 E-value=53 Score=27.17 Aligned_cols=50 Identities=16% Similarity=0.290 Sum_probs=35.7
Q ss_pred ehhhHHHHHHHHHHHhCCCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH
Q psy9933 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA 126 (208)
Q Consensus 63 ~~LDs~R~~~~la~~l~v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~ 126 (208)
+.+|...++.++..... ..|++.++.++.|+.. .++.+|+.++.+.+.+.
T Consensus 28 g~iD~~~l~~lv~~li~---~Gv~gl~v~GtTGE~~-----------~Ls~eEr~~v~~~~~~~ 77 (301)
T 1xky_A 28 GNIDFAKTTKLVNYLID---NGTTAIVVGGTTGESP-----------TLTSEEKVALYRHVVSV 77 (301)
T ss_dssp SSBCHHHHHHHHHHHHH---TTCCEEEESSTTTTGG-----------GSCHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHH---cCCCEEEECccccChh-----------hCCHHHHHHHHHHHHHH
Confidence 45888888888776653 3578777776657653 37788888888877764
No 65
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=32.03 E-value=53 Score=27.45 Aligned_cols=50 Identities=16% Similarity=0.102 Sum_probs=36.0
Q ss_pred ehhhHHHHHHHHHHHhCCCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH
Q psy9933 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA 126 (208)
Q Consensus 63 ~~LDs~R~~~~la~~l~v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~ 126 (208)
+.+|-..++.++...+. ..|++.++.++.|+.. .++.+|+.++.+.+.+.
T Consensus 38 g~iD~~~l~~li~~li~---~Gv~Gl~v~GtTGE~~-----------~Ls~~Er~~v~~~~v~~ 87 (315)
T 3si9_A 38 GAIDEKAFCNFVEWQIT---QGINGVSPVGTTGESP-----------TLTHEEHKRIIELCVEQ 87 (315)
T ss_dssp SCBCHHHHHHHHHHHHH---TTCSEEECSSTTTTGG-----------GSCHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHH---cCCCEEEeCccccCcc-----------ccCHHHHHHHHHHHHHH
Confidence 46888888888877653 5678777666657653 37788888888877764
No 66
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=31.35 E-value=54 Score=27.22 Aligned_cols=50 Identities=20% Similarity=0.224 Sum_probs=36.4
Q ss_pred ehhhHHHHHHHHHHHhCCCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH
Q psy9933 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA 126 (208)
Q Consensus 63 ~~LDs~R~~~~la~~l~v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~ 126 (208)
+.+|-..++.++...+. ..|++.++.++.|+.. .++.+|+.++.+.+.+.
T Consensus 31 g~iD~~~l~~lv~~li~---~Gv~gi~v~GttGE~~-----------~Lt~~Er~~v~~~~~~~ 80 (304)
T 3l21_A 31 GSLDTATAARLANHLVD---QGCDGLVVSGTTGESP-----------TTTDGEKIELLRAVLEA 80 (304)
T ss_dssp SCBCHHHHHHHHHHHHH---TTCSEEEESSTTTTGG-----------GSCHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHH---cCCCEEEeCccccchh-----------hCCHHHHHHHHHHHHHH
Confidence 36888888888877653 4678777766657643 37788888888887765
No 67
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=30.90 E-value=58 Score=27.59 Aligned_cols=50 Identities=14% Similarity=0.118 Sum_probs=36.4
Q ss_pred ehhhHHHHHHHHHHHhCCCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH
Q psy9933 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA 126 (208)
Q Consensus 63 ~~LDs~R~~~~la~~l~v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~ 126 (208)
+.+|-..++.++...+. ..|++.++.++.|+.. .++.+|+.++.+.+.+.
T Consensus 47 g~ID~~~l~~lv~~li~---~Gv~Gl~v~GtTGE~~-----------~Ls~eEr~~vi~~~ve~ 96 (343)
T 2v9d_A 47 GQLDKPGTAALIDDLIK---AGVDGLFFLGSGGEFS-----------QLGAEERKAIARFAIDH 96 (343)
T ss_dssp SSBCHHHHHHHHHHHHH---TTCSCEEESSTTTTGG-----------GSCHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHH---cCCCEEEeCccccChh-----------hCCHHHHHHHHHHHHHH
Confidence 45888888888776653 4578777776657653 37888998888888765
No 68
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=30.32 E-value=56 Score=28.08 Aligned_cols=50 Identities=16% Similarity=0.190 Sum_probs=36.9
Q ss_pred ehhhHHHHHHHHHHHhCCCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH
Q psy9933 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA 126 (208)
Q Consensus 63 ~~LDs~R~~~~la~~l~v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~ 126 (208)
+.+|-..++.++...+. ..|++.+++++.|+.. .++.+|+.++.+.+.+.
T Consensus 75 g~ID~~al~~lv~~li~---~Gv~Gl~v~GTTGE~~-----------~Ls~eEr~~vi~~~ve~ 124 (360)
T 4dpp_A 75 GRFDLEAYDDLVNIQIQ---NGAEGVIVGGTTGEGQ-----------LMSWDEHIMLIGHTVNC 124 (360)
T ss_dssp SSBCHHHHHHHHHHHHH---TTCCEEEESSTTTTGG-----------GSCHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHH---cCCCEEEecccccChh-----------hCCHHHHHHHHHHHHHH
Confidence 35888999888877653 5678877776657653 37888998888877764
No 69
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=30.23 E-value=36 Score=28.25 Aligned_cols=50 Identities=14% Similarity=0.007 Sum_probs=35.9
Q ss_pred ehhhHHHHHHHHHHHhCCCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH
Q psy9933 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA 126 (208)
Q Consensus 63 ~~LDs~R~~~~la~~l~v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~ 126 (208)
+.+|-..++.++...+. ..|++.++.++.|+.. .++.+|+.++.+.+.+.
T Consensus 20 g~iD~~~l~~lv~~li~---~Gv~gl~v~GttGE~~-----------~Ls~~Er~~v~~~~~~~ 69 (300)
T 3eb2_A 20 GRVRADVMGRLCDDLIQ---AGVHGLTPLGSTGEFA-----------YLGTAQREAVVRATIEA 69 (300)
T ss_dssp SCBCHHHHHHHHHHHHH---TTCSCBBTTSGGGTGG-----------GCCHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHH---cCCCEEEECccccCcc-----------ccCHHHHHHHHHHHHHH
Confidence 46888888888877653 4577776666656643 37788888888877765
No 70
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=30.04 E-value=53 Score=27.46 Aligned_cols=50 Identities=18% Similarity=0.212 Sum_probs=35.7
Q ss_pred ehhhHHHHHHHHHHHhCCCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH
Q psy9933 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA 126 (208)
Q Consensus 63 ~~LDs~R~~~~la~~l~v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~ 126 (208)
+.+|-..++.++...+. ..|++.++.++.|+.. .++.+|+.++.+.+.+.
T Consensus 27 g~iD~~~l~~lv~~li~---~Gv~gl~v~GtTGE~~-----------~Ls~~Er~~v~~~~~~~ 76 (318)
T 3qfe_A 27 DTLDLASQERYYAYLAR---SGLTGLVILGTNAEAF-----------LLTREERAQLIATARKA 76 (318)
T ss_dssp TEECHHHHHHHHHHHHT---TTCSEEEESSGGGTGG-----------GSCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH---cCCCEEEeCccccChh-----------hCCHHHHHHHHHHHHHH
Confidence 35888888888877653 4678777666657643 37788888888877764
No 71
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=29.88 E-value=42 Score=27.78 Aligned_cols=50 Identities=14% Similarity=0.107 Sum_probs=33.9
Q ss_pred ehhhHHHHHHHHHHHhCCCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH
Q psy9933 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA 126 (208)
Q Consensus 63 ~~LDs~R~~~~la~~l~v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~ 126 (208)
+.+|-..++.++..... ..|++.++.++.|+.. .++.+|+.++.+.+.+.
T Consensus 16 g~iD~~~l~~lv~~li~---~Gv~gi~v~GttGE~~-----------~Ls~~Er~~v~~~~~~~ 65 (297)
T 2rfg_A 16 GQVDEKALAGLVDWQIK---HGAHGLVPVGTTGESP-----------TLTEEEHKRVVALVAEQ 65 (297)
T ss_dssp TEECHHHHHHHHHHHHH---TTCSEEECSSGGGTGG-----------GSCHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHH---cCCCEEEECccccchh-----------hCCHHHHHHHHHHHHHH
Confidence 46888888877766643 4577777666656643 36777877777777654
No 72
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=29.63 E-value=47 Score=27.79 Aligned_cols=50 Identities=12% Similarity=0.075 Sum_probs=35.5
Q ss_pred ehhhHHHHHHHHHHHhCCCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH
Q psy9933 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA 126 (208)
Q Consensus 63 ~~LDs~R~~~~la~~l~v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~ 126 (208)
+.+|-..++.++...+. ..|++.++.++.|+.. .++.+|+.++.+.+.+.
T Consensus 40 g~iD~~~l~~lv~~li~---~Gv~Gi~v~GtTGE~~-----------~Ls~~Er~~v~~~~v~~ 89 (315)
T 3na8_A 40 GGLDLPALGRSIERLID---GGVHAIAPLGSTGEGA-----------YLSDPEWDEVVDFTLKT 89 (315)
T ss_dssp SSBCHHHHHHHHHHHHH---TTCSEEECSSGGGTGG-----------GSCHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHH---cCCCEEEECccccChh-----------hCCHHHHHHHHHHHHHH
Confidence 36888888888877653 5677777666656643 37788888888877764
No 73
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=29.31 E-value=46 Score=27.40 Aligned_cols=50 Identities=8% Similarity=0.054 Sum_probs=35.6
Q ss_pred ehhhHHHHHHHHHHHhCCCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH
Q psy9933 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA 126 (208)
Q Consensus 63 ~~LDs~R~~~~la~~l~v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~ 126 (208)
+.+|-..++.++..... ..|++.++.++.|+.. .++.+|+.++.+.+.+.
T Consensus 17 g~iD~~~l~~lv~~li~---~Gv~gl~~~GttGE~~-----------~Ls~~Er~~v~~~~~~~ 66 (292)
T 2ojp_A 17 GNVCRASLKKLIDYHVA---SGTSAIVSVGTTGESA-----------TLNHDEHADVVMMTLDL 66 (292)
T ss_dssp SCBCHHHHHHHHHHHHH---HTCCEEEESSTTTTGG-----------GSCHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHH---cCCCEEEECccccchh-----------hCCHHHHHHHHHHHHHH
Confidence 45888888877766542 3578777777767653 37788888888887764
No 74
>3ueb_A Putative uncharacterized protein; alpha and beta protein (A+B), unknown function; 1.98A {Thermococcus onnurineus}
Probab=28.63 E-value=84 Score=21.79 Aligned_cols=34 Identities=18% Similarity=0.079 Sum_probs=21.7
Q ss_pred eEEeccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy9933 170 IEKNLGLGKLSDFEKELVKAAVPELKKNIAKGEEFVA 206 (208)
Q Consensus 170 v~~i~~lp~L~~~E~~~l~~sa~~l~~~i~~~~~~~~ 206 (208)
|.++ +||.||++|.-.+-+-++.+- |+-..++|.
T Consensus 10 VihI-GLPeLsEe~lieiGelaQ~~i--I~~iF~~L~ 43 (110)
T 3ueb_A 10 VIHI-GLPELSEEQLIEIGELAQETI--IDYVFDHLT 43 (110)
T ss_dssp EEEE-ECTTSCHHHHHHHHHHHHHHH--HHHHHHHSC
T ss_pred EEEe-cCCccCHHHHHHHHHHHHHHH--HHHHHHHhh
Confidence 4443 789999999887777666543 344444443
No 75
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=28.46 E-value=55 Score=26.86 Aligned_cols=50 Identities=14% Similarity=0.092 Sum_probs=34.6
Q ss_pred ehhhHHHHHHHHHHHhCCCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH
Q psy9933 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA 126 (208)
Q Consensus 63 ~~LDs~R~~~~la~~l~v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~ 126 (208)
+.+|-..++.++...+. ..|++.++.++.|+.. .++.+|+.++.+.+.+.
T Consensus 17 g~iD~~~l~~lv~~li~---~Gv~gl~~~GttGE~~-----------~Ls~~Er~~v~~~~~~~ 66 (291)
T 3tak_A 17 GGVDWKSLEKLVEWHIE---QGTNSIVAVGTTGEAS-----------TLSMEEHTQVIKEIIRV 66 (291)
T ss_dssp SCBCHHHHHHHHHHHHH---HTCCEEEESSTTTTGG-----------GSCHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHH---CCCCEEEECccccccc-----------cCCHHHHHHHHHHHHHH
Confidence 46888888887766542 4567767666657643 37778888888877664
No 76
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=28.27 E-value=53 Score=27.29 Aligned_cols=50 Identities=12% Similarity=0.113 Sum_probs=33.4
Q ss_pred ehhhHHHHHHHHHHHhCCCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH
Q psy9933 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA 126 (208)
Q Consensus 63 ~~LDs~R~~~~la~~l~v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~ 126 (208)
+.+|...++.++.... ...|++.++.++.|+.. .++.+|+.++.+.+.+.
T Consensus 30 g~iD~~~l~~lv~~li---~~Gv~Gl~v~GtTGE~~-----------~Ls~~Er~~v~~~~~~~ 79 (307)
T 3s5o_A 30 AEVDYGKLEENLHKLG---TFPFRGFVVQGSNGEFP-----------FLTSSERLEVVSRVRQA 79 (307)
T ss_dssp SCBCHHHHHHHHHHHT---TSCCSEEEESSGGGTGG-----------GSCHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHH---HcCCCEEEECccccchh-----------hCCHHHHHHHHHHHHHH
Confidence 3688888888887664 34578777777656643 25667777776666553
No 77
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=27.79 E-value=52 Score=27.75 Aligned_cols=50 Identities=16% Similarity=0.224 Sum_probs=35.3
Q ss_pred ehhhHHHHHHHHHHHhCCCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH
Q psy9933 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA 126 (208)
Q Consensus 63 ~~LDs~R~~~~la~~l~v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~ 126 (208)
+.+|-..++.++...+. ..|++.++.++.|+.. .++.+|+.++.+.+.+.
T Consensus 50 g~iD~~~l~~lv~~li~---~Gv~Gl~v~GtTGE~~-----------~Ls~eEr~~vi~~~ve~ 99 (332)
T 2r8w_A 50 GRVDIEAFSALIARLDA---AEVDSVGILGSTGIYM-----------YLTREERRRAIEAAATI 99 (332)
T ss_dssp CCBCHHHHHHHHHHHHH---HTCSEEEESSTTTTGG-----------GSCHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHH---cCCCEEEECccccChh-----------hCCHHHHHHHHHHHHHH
Confidence 45888888887766643 3578777776657653 37788888888877764
No 78
>3fgh_A Transcription factor A, mitochondrial; HMG domain, mitochondrial transcription, activator, DNA- binding, mitochondrion, phosphoprotein; 1.35A {Homo sapiens}
Probab=27.66 E-value=95 Score=19.12 Aligned_cols=26 Identities=31% Similarity=0.226 Sum_probs=22.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHH
Q psy9933 178 KLSDFEKELVKAAVPELKKNIAKGEE 203 (208)
Q Consensus 178 ~L~~~E~~~l~~sa~~l~~~i~~~~~ 203 (208)
.|+++|++.+.+-++..++..+..++
T Consensus 39 ~ls~~eK~~y~~~A~~~k~~Y~~e~~ 64 (67)
T 3fgh_A 39 NLSDSEKELYIQHAKEDETRYHNEMK 64 (67)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 69999999999999999988877654
No 79
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=27.58 E-value=46 Score=27.38 Aligned_cols=50 Identities=12% Similarity=0.055 Sum_probs=35.5
Q ss_pred ehhhHHHHHHHHHHHhCCCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH
Q psy9933 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA 126 (208)
Q Consensus 63 ~~LDs~R~~~~la~~l~v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~ 126 (208)
+.+|...++.++...+. ..|++.++.++.|+.. .++.+|+.++.+.+.+.
T Consensus 16 g~iD~~~l~~lv~~li~---~Gv~gl~~~GttGE~~-----------~Ls~~Er~~v~~~~~~~ 65 (292)
T 2vc6_A 16 DRIDEVALHDLVEWQIE---EGSFGLVPCGTTGESP-----------TLSKSEHEQVVEITIKT 65 (292)
T ss_dssp TEECHHHHHHHHHHHHH---TTCSEEETTSGGGTGG-----------GSCHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHH---cCCCEEEECccccChh-----------hCCHHHHHHHHHHHHHH
Confidence 46888888888776653 3578777766657643 37788888888877764
No 80
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=27.41 E-value=57 Score=26.77 Aligned_cols=48 Identities=8% Similarity=0.185 Sum_probs=34.1
Q ss_pred hhHHHHHHHHHHHhCCCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH
Q psy9933 65 LDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA 126 (208)
Q Consensus 65 LDs~R~~~~la~~l~v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~ 126 (208)
+|-..++.++..... ..|++.++.++.|+.. .++.+|+.++.+.+.+.
T Consensus 19 iD~~~l~~lv~~li~---~Gv~gl~~~GttGE~~-----------~Ls~~Er~~v~~~~~~~ 66 (291)
T 3a5f_A 19 VDFDKLSELIEWHIK---SKTDAIIVCGTTGEAT-----------TMTETERKETIKFVIDK 66 (291)
T ss_dssp BCHHHHHHHHHHHHH---TTCCEEEESSGGGTGG-----------GSCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHH---cCCCEEEECccccChh-----------hCCHHHHHHHHHHHHHH
Confidence 788888877766643 4578777766657643 37788888888877764
No 81
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=27.25 E-value=50 Score=27.56 Aligned_cols=50 Identities=8% Similarity=0.160 Sum_probs=35.1
Q ss_pred ehhhHHHHHHHHHHHhCCCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH
Q psy9933 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA 126 (208)
Q Consensus 63 ~~LDs~R~~~~la~~l~v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~ 126 (208)
+.+|-..++.++...+ ...|++.++.++.|+.. .++.+|+.++.+.+.+.
T Consensus 23 g~iD~~~l~~lv~~li---~~Gv~Gl~v~GtTGE~~-----------~Ls~~Er~~v~~~~~~~ 72 (311)
T 3h5d_A 23 GSINFDAIPALIEHLL---AHHTDGILLAGTTAESP-----------TLTHDEELELFAAVQKV 72 (311)
T ss_dssp SSBCTTHHHHHHHHHH---HTTCCCEEESSTTTTGG-----------GSCHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHH---HcCCCEEEECccccChh-----------hCCHHHHHHHHHHHHHH
Confidence 4577777777776654 24678777777767653 37788888888887765
No 82
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=26.64 E-value=58 Score=26.78 Aligned_cols=51 Identities=12% Similarity=0.192 Sum_probs=35.2
Q ss_pred ehhhHHHHHHHHHHHhCCCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH
Q psy9933 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA 126 (208)
Q Consensus 63 ~~LDs~R~~~~la~~l~v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~ 126 (208)
+.+|-..++.++..... ...|++.++.++.|+.. .++.+|+.++.+.+.+.
T Consensus 19 g~iD~~~l~~lv~~li~--~~Gv~gl~~~GttGE~~-----------~Ls~~Er~~v~~~~~~~ 69 (293)
T 1f6k_A 19 GTINEKGLRQIIRHNID--KMKVDGLYVGGSTGENF-----------MLSTEEKKEIFRIAKDE 69 (293)
T ss_dssp SCBCHHHHHHHHHHHHH--TSCCSEEEESSGGGTGG-----------GSCHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHh--hCCCcEEEeCccccchh-----------hCCHHHHHHHHHHHHHH
Confidence 35888888887776643 24578777766657643 37788888888877754
No 83
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=26.09 E-value=91 Score=25.44 Aligned_cols=50 Identities=20% Similarity=0.217 Sum_probs=35.8
Q ss_pred ehhhHHHHHHHHHHHhCCCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH
Q psy9933 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA 126 (208)
Q Consensus 63 ~~LDs~R~~~~la~~l~v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~ 126 (208)
+.+|...++.++...+. ..|++.++.++.|+.. .++.+|+.++.+.+.+.
T Consensus 14 g~iD~~~l~~lv~~li~---~Gv~gl~v~GttGE~~-----------~Ls~~Er~~v~~~~~~~ 63 (286)
T 2r91_A 14 GRLDPELFANHVKNITS---KGVDVVFVAGTTGLGP-----------ALSLQEKMELTDAATSA 63 (286)
T ss_dssp TEECHHHHHHHHHHHHH---TTCCEEEETSTTTTGG-----------GSCHHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHH---CCCCEEEECccccChh-----------hCCHHHHHHHHHHHHHH
Confidence 45888888888776653 4578777777767653 37788888888877654
No 84
>2lr2_A Immunoglobulin G-binding protein A; Z domain, lanthanide binding TAG, de novo protein; NMR {Artificial gene}
Probab=26.01 E-value=34 Score=22.97 Aligned_cols=21 Identities=14% Similarity=0.194 Sum_probs=16.8
Q ss_pred EeccCCCCCHHHHHHHHHHHH
Q psy9933 172 KNLGLGKLSDFEKELVKAAVP 192 (208)
Q Consensus 172 ~i~~lp~L~~~E~~~l~~sa~ 192 (208)
+|+.||+|+++.+..+-+|.+
T Consensus 28 EIl~lPNLneeQrnafiqSLk 48 (88)
T 2lr2_A 28 EILHLPNLNEEQRNAFIQSLK 48 (88)
T ss_dssp HHHTCSSCCHHHHHHHHHHHH
T ss_pred HHHhCCCCCHHHHHHHHHHhc
Confidence 467789999999988877654
No 85
>3p52_A NH(3)-dependent NAD(+) synthetase; structural genomics, center for structural genomics of infec diseases, NADE, CSGI; 2.74A {Campylobacter jejuni} SCOP: c.26.2.0
Probab=25.63 E-value=1.7e+02 Score=23.29 Aligned_cols=68 Identities=13% Similarity=0.103 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHhCCCeEEEEeCCCccccHHHHHHHHHHcCCCCCCCeEEeeh------hhHHHHHHHHHHHhCCCCCc
Q psy9933 12 SIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLFGVTT------LDIVRANTFVAEAKGLNPTD 84 (208)
Q Consensus 12 ~Iv~~i~~~i~~~~p~~iiivvtNPvD~~~~~~~~~~~~~~~~~~~~ViG~~~------LDs~R~~~~la~~l~v~~~~ 84 (208)
.++.-+-+.+.+++++.+++-+|==+|..+ +++++++..| .+|++++. -++...-..+++.+|++-..
T Consensus 12 ~l~~~l~d~v~~~g~~~vvv~lSGGiDSsv--~a~l~~~~~g---~~v~av~~~~~~~~~~~~~~a~~~a~~lgi~~~~ 85 (249)
T 3p52_A 12 KMCDFIQEKVKNSQSQGVVLGLSGGIDSAL--VATLCKRALK---ENVFALLMPTQISNKANLEDALRLCADLNLEYKI 85 (249)
T ss_dssp HHHHHHHHHHHTSSCSEEEEECCSSHHHHH--HHHHHHHHHT---TSEEEEECCSCCSSCHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCHHHHH--HHHHHHHHcC---CcEEEEEecCCCCCHHHHHHHHHHHHHhCCCEEE
Confidence 345555566677788999999999999976 4566776644 46887741 24455556788899875433
No 86
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=25.50 E-value=57 Score=27.04 Aligned_cols=49 Identities=22% Similarity=0.287 Sum_probs=33.8
Q ss_pred hhhHHHHHHHHHHHhCCCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH
Q psy9933 64 TLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA 126 (208)
Q Consensus 64 ~LDs~R~~~~la~~l~v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~ 126 (208)
.+|-..++.++..... ..|++.++.++.|+.. .++.+|+.++.+.+.+.
T Consensus 29 ~iD~~~l~~lv~~li~---~Gv~gl~v~GtTGE~~-----------~Ls~eEr~~vi~~~~~~ 77 (306)
T 1o5k_A 29 ELDLESYERLVRYQLE---NGVNALIVLGTTGESP-----------TVNEDEREKLVSRTLEI 77 (306)
T ss_dssp EECHHHHHHHHHHHHH---TTCCEEEESSGGGTGG-----------GCCHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHH---cCCCEEEeCccccchh-----------hCCHHHHHHHHHHHHHH
Confidence 4777777777766543 3577777766656643 37788888888887764
No 87
>1zda_A Mini protein A domain, Z38; IGG binding domain, protein A mimic; NMR {Synthetic construct} SCOP: k.13.1.1 PDB: 1zdb_A
Probab=24.97 E-value=14 Score=21.21 Aligned_cols=20 Identities=10% Similarity=0.110 Sum_probs=15.1
Q ss_pred EeccCCCCCHHHHHHHHHHH
Q psy9933 172 KNLGLGKLSDFEKELVKAAV 191 (208)
Q Consensus 172 ~i~~lp~L~~~E~~~l~~sa 191 (208)
+++.+|.|||+++..+-+|.
T Consensus 16 evLh~~nLtEeQrn~yI~sl 35 (38)
T 1zda_A 16 EALHDPNLNEEQRNAKIKSI 35 (38)
T ss_dssp HHHSCSSSCTTHHHHHHHHH
T ss_pred HHHcCCCCCHHHHHhHHHHh
Confidence 35667899999988876654
No 88
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=24.14 E-value=69 Score=26.29 Aligned_cols=49 Identities=6% Similarity=0.149 Sum_probs=33.5
Q ss_pred hhhHHHHHHHHHHHhCCCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH
Q psy9933 64 TLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA 126 (208)
Q Consensus 64 ~LDs~R~~~~la~~l~v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~ 126 (208)
.+|-..++.++...+. ..|++.+++++.|+.. .++.+|+.++.+.+.+.
T Consensus 19 ~iD~~~l~~lv~~li~---~Gv~gl~v~GttGE~~-----------~Lt~~Er~~v~~~~~~~ 67 (292)
T 3daq_A 19 KVNLEALKAHVNFLLE---NNAQAIIVNGTTAESP-----------TLTTDEKELILKTVIDL 67 (292)
T ss_dssp EECHHHHHHHHHHHHH---TTCCEEEESSGGGTGG-----------GSCHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHH---cCCCEEEECccccccc-----------cCCHHHHHHHHHHHHHH
Confidence 3677777777766542 4678777776757643 37788888888877664
No 89
>3rnl_A Sulfotransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.75A {Alicyclobacillus acidocaldarius subsp}
Probab=23.47 E-value=43 Score=27.82 Aligned_cols=26 Identities=23% Similarity=0.388 Sum_probs=19.9
Q ss_pred HHHHHHHHhCCCeEEE-EeCCCccccH
Q psy9933 16 DIIKAVAEVAPKALIG-IISNPVNSTV 41 (208)
Q Consensus 16 ~i~~~i~~~~p~~iii-vvtNPvD~~~ 41 (208)
+....|.+..|++++| |+=||+|...
T Consensus 98 ~~~~rI~~~~P~aKiI~ilRnP~dra~ 124 (311)
T 3rnl_A 98 GTAQRMYDAYPDAKILIMLRNPVDRAF 124 (311)
T ss_dssp THHHHHHHHCTTCEEEEEECCHHHHHH
T ss_pred HHHHHHHHhCCCCeEEEEecCHHHHHH
Confidence 3567888999999555 5559999974
No 90
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=22.71 E-value=61 Score=27.02 Aligned_cols=50 Identities=16% Similarity=0.133 Sum_probs=33.9
Q ss_pred ehhhHHHHHHHHHHHhCCCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH
Q psy9933 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA 126 (208)
Q Consensus 63 ~~LDs~R~~~~la~~l~v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~ 126 (208)
+.+|-..++.++...+. ..|++.++.++.|+.. .++.+|+.++.+.+.+.
T Consensus 39 g~iD~~~l~~lv~~li~---~Gv~Gl~v~GtTGE~~-----------~Ls~~Er~~v~~~~v~~ 88 (314)
T 3qze_A 39 GRLDWDSLAKLVDFHLQ---EGTNAIVAVGTTGESA-----------TLDVEEHIQVIRRVVDQ 88 (314)
T ss_dssp SCBCHHHHHHHHHHHHH---HTCCEEEESSGGGTGG-----------GCCHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHH---cCCCEEEECccccChh-----------hCCHHHHHHHHHHHHHH
Confidence 35788888877766542 4577766665546643 37788888888777654
No 91
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=22.61 E-value=75 Score=26.44 Aligned_cols=50 Identities=16% Similarity=0.115 Sum_probs=36.7
Q ss_pred ehhhHHHHHHHHHHHhCCCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH
Q psy9933 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA 126 (208)
Q Consensus 63 ~~LDs~R~~~~la~~l~v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~ 126 (208)
+.+|-..++.++...+. ..|++.+++++.|+.. .++.+|+.++.+.+.+.
T Consensus 28 g~iD~~~l~~lv~~li~---~Gv~Gl~v~GtTGE~~-----------~Ls~eEr~~v~~~~v~~ 77 (316)
T 3e96_A 28 GSIDWHHYKETVDRIVD---NGIDVIVPCGNTSEFY-----------ALSLEEAKEEVRRTVEY 77 (316)
T ss_dssp CCBCHHHHHHHHHHHHT---TTCCEECTTSGGGTGG-----------GSCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH---cCCCEEEeCccccCcc-----------cCCHHHHHHHHHHHHHH
Confidence 46888899888877764 5678777776656643 37788888888877664
No 92
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=22.60 E-value=2.5e+02 Score=24.92 Aligned_cols=54 Identities=11% Similarity=0.011 Sum_probs=36.1
Q ss_pred HHHHHHhhhc------------------CCCCcEEEe----ecCCeeEEeccCCC-CCHHHHHH-HHHHHHHHHHHHHH
Q psy9933 146 EKERQQFSPF------------------IKTFASFFS----PQKNGIEKNLGLGK-LSDFEKEL-VKAAVPELKKNIAK 200 (208)
Q Consensus 146 a~~~~i~ai~------------------~~~~~~~~s----ig~~Gv~~i~~lp~-L~~~E~~~-l~~sa~~l~~~i~~ 200 (208)
.++.++++|+ +.|+++++- ++++|+..+.- .+ |.+.-..+ ++.-...-+-.++.
T Consensus 355 ~a~~ii~ai~~~~~~~~~vnv~N~G~I~~lp~d~vVEvp~~v~~~G~~p~~~-g~~lP~~~~~l~~~~~~~~e~l~veA 432 (480)
T 1obb_A 355 QHIPFIDALLNDNKARFVVNIPNKGIIHGIDDDVVVEVPALVDKNGIHPEKI-EPPLPDRVVKYYLRPRIMRMEMALEA 432 (480)
T ss_dssp SHHHHHHHHHHCCCEEEEEEEECTTSSTTSCTTSEEEEEEEEETTEEEECCC-SSCCCHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCeEEEEEeeCCceeCCCCCCeEEEEEEEEcCCCCEeecc-CCCCCHHHHhHHHHHHHHHHHHHHHH
Confidence 3577888875 125666665 99999999864 36 88887777 66554444444443
No 93
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=22.35 E-value=72 Score=26.51 Aligned_cols=50 Identities=12% Similarity=0.081 Sum_probs=35.5
Q ss_pred ehhhHHHHHHHHHHHhCCCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH
Q psy9933 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA 126 (208)
Q Consensus 63 ~~LDs~R~~~~la~~l~v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~ 126 (208)
+.+|-..++.++...+. ..|++.++.++.|+.. .++.+|+.++.+.+.+.
T Consensus 24 g~iD~~~l~~lv~~li~---~Gv~Gl~v~GtTGE~~-----------~Lt~~Er~~v~~~~v~~ 73 (313)
T 3dz1_A 24 GKIDDVSIDRLTDFYAE---VGCEGVTVLGILGEAP-----------KLDAAEAEAVATRFIKR 73 (313)
T ss_dssp SCBCHHHHHHHHHHHHH---TTCSEEEESTGGGTGG-----------GSCHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHH---CCCCEEEeCccCcChh-----------hCCHHHHHHHHHHHHHH
Confidence 46888888888876653 4677777766656643 37788888888877664
No 94
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=22.18 E-value=60 Score=27.07 Aligned_cols=50 Identities=18% Similarity=0.195 Sum_probs=36.2
Q ss_pred ehhhHHHHHHHHHHHhCCCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH
Q psy9933 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA 126 (208)
Q Consensus 63 ~~LDs~R~~~~la~~l~v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~ 126 (208)
+.+|-..++.++...+. ..|++.+++++.|+.. .++.+|+.++.+.+.+.
T Consensus 28 g~iD~~~l~~lv~~li~---~Gv~gl~v~GtTGE~~-----------~Ls~eEr~~vi~~~~~~ 77 (314)
T 3d0c_A 28 REIDWKGLDDNVEFLLQ---NGIEVIVPNGNTGEFY-----------ALTIEEAKQVATRVTEL 77 (314)
T ss_dssp CCBCHHHHHHHHHHHHH---TTCSEECTTSGGGTGG-----------GSCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH---cCCCEEEECcccCChh-----------hCCHHHHHHHHHHHHHH
Confidence 46888888887776653 4577777766657643 37889999998888765
No 95
>2yfv_C SCM3, KLLA0F05115P; cell cycle, kinetochore, centromere, histone chaperone, BUDD; 2.32A {Kluyveromyces lactis nrrl y-1140}
Probab=22.02 E-value=1.5e+02 Score=18.88 Aligned_cols=12 Identities=42% Similarity=0.183 Sum_probs=9.2
Q ss_pred CCCCCHHHHHHH
Q psy9933 176 LGKLSDFEKELV 187 (208)
Q Consensus 176 lp~L~~~E~~~l 187 (208)
+|+||++|.-..
T Consensus 15 iP~lsdeevme~ 26 (63)
T 2yfv_C 15 IPKLSDEEVMER 26 (63)
T ss_dssp EECCCHHHHHHH
T ss_pred CCccCHHHHHHH
Confidence 689999996544
No 96
>2ba3_A NIKA; dimer, bacterial conjugation, relaxase, DNA binding, ribbon- helix-helix, DNA binding protein; NMR {Plasmid R64}
Probab=21.39 E-value=46 Score=19.65 Aligned_cols=20 Identities=20% Similarity=0.311 Sum_probs=16.3
Q ss_pred ccCCCCCHHHHHHHHHHHHHH
Q psy9933 174 LGLGKLSDFEKELVKAAVPEL 194 (208)
Q Consensus 174 ~~lp~L~~~E~~~l~~sa~~l 194 (208)
+.+ .||++|.+.|++-|+.-
T Consensus 18 i~v-Rlt~eE~~~l~~~A~~~ 37 (51)
T 2ba3_A 18 RTL-RFSPVEDETIRKKAEDS 37 (51)
T ss_dssp EEE-EECHHHHHHHHHHHHHH
T ss_pred EEE-EECHHHHHHHHHHHHHh
Confidence 456 69999999999888754
No 97
>1g2c_B Fusion protein (F); membrane fusion, pneumovirus, HRSV, viral protein; 2.30A {Human respiratory syncytial virus} SCOP: h.3.2.1
Probab=21.35 E-value=1.1e+02 Score=17.93 Aligned_cols=24 Identities=21% Similarity=0.439 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhC
Q psy9933 185 ELVKAAVPELKKNIAKGEEFVAKS 208 (208)
Q Consensus 185 ~~l~~sa~~l~~~i~~~~~~~~~~ 208 (208)
.++..|..++.+.|++-..|+.+|
T Consensus 10 DqFdvai~qV~esI~qS~~~i~~S 33 (43)
T 1g2c_B 10 DEFDASISQVNEKINQSLAFIRKS 33 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457778888888888887777553
No 98
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=20.93 E-value=97 Score=25.51 Aligned_cols=50 Identities=10% Similarity=0.135 Sum_probs=36.3
Q ss_pred ehhhHHHHHHHHHHHhCCCCCccccceeccCCCCceeecccCCCCCCCCCHHHHHHHHHHHHHH
Q psy9933 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQEA 126 (208)
Q Consensus 63 ~~LDs~R~~~~la~~l~v~~~~v~~~ViGeH~g~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~ 126 (208)
+.+|-..++.++...+. ..|++.++.++.|+.. .++.+|+.++.+.+.+.
T Consensus 23 g~iD~~~l~~lv~~li~---~Gv~gl~v~GttGE~~-----------~Ls~~Er~~v~~~~~~~ 72 (301)
T 3m5v_A 23 GKVDEQSYARLIKRQIE---NGIDAVVPVGTTGESA-----------TLTHEEHRTCIEIAVET 72 (301)
T ss_dssp TEECHHHHHHHHHHHHH---TTCCEEECSSTTTTGG-----------GSCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH---cCCCEEEECccccChh-----------hCCHHHHHHHHHHHHHH
Confidence 46888888888877653 5678877776757653 37788888888877654
No 99
>3nrd_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.06A {Sinorhizobium meliloti}
Probab=20.75 E-value=1.5e+02 Score=21.23 Aligned_cols=42 Identities=21% Similarity=0.403 Sum_probs=25.1
Q ss_pred ccccceeccCCCCcee--ecccCCCCCCCCCHHHHHHHHHHHHHH
Q psy9933 84 DVNVPVIGGHAGITII--PLISQATPSVSFPDDQLKALTGRIQEA 126 (208)
Q Consensus 84 ~v~~~ViGeH~g~~~v--p~~S~~~~~~~~~~~~~~~l~~~v~~~ 126 (208)
.++.-||+...||... |.|..... ..+++++++++.++++.+
T Consensus 91 HlH~HviPR~~~D~~~~~~~~~~~~~-~~~~~~el~~~a~~i~~~ 134 (135)
T 3nrd_A 91 QLHVHVIARREGDPNWPGPVWGFGKA-EPWPEEEHRTFAARIMEN 134 (135)
T ss_dssp SCCEEEEEECTTSTTTTSCSTTCSCC-CCCCHHHHHHHHHHHHHH
T ss_pred EEEEEEecCCCCCCCCCCcccCCCCC-CCCCHHHHHHHHHHHHhh
Confidence 4455566655555433 34543221 247889999999988753
No 100
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=20.52 E-value=92 Score=22.96 Aligned_cols=26 Identities=31% Similarity=0.448 Sum_probs=20.1
Q ss_pred HHHHHHHHHHhCCCeEEEEeC-CCccc
Q psy9933 14 VRDIIKAVAEVAPKALIGIIS-NPVNS 39 (208)
Q Consensus 14 v~~i~~~i~~~~p~~iiivvt-NPvD~ 39 (208)
+++++..+.+.+|++.+++++ .|+..
T Consensus 98 l~~ii~~l~~~~p~~~ii~~~~~P~~~ 124 (200)
T 4h08_A 98 FPKLIKIIRKYAPKAKLIWANTTPVRT 124 (200)
T ss_dssp HHHHHHHHHHHCTTCEEEEECCCCCEE
T ss_pred HHHHHHHHhhhCCCccEEEeccCCCcc
Confidence 577888899999999887776 55533
No 101
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9
Probab=20.33 E-value=86 Score=24.73 Aligned_cols=25 Identities=12% Similarity=0.101 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHhCCCeEEEEeCCCc
Q psy9933 13 IVRDIIKAVAEVAPKALIGIISNPV 37 (208)
Q Consensus 13 Iv~~i~~~i~~~~p~~iiivvtNPv 37 (208)
-++.++..+.+.+|++.|++++.|.
T Consensus 146 ~l~~li~~lr~~~p~a~Iilitp~~ 170 (274)
T 3bzw_A 146 RINIGITQLKKLFPDKQIVLLTPLH 170 (274)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECCCC
T ss_pred HHHHHHHHHHHHCCCCeEEEEeccc
Confidence 3778888899999999999998754
Done!