RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9933
(208 letters)
>d1mlda2 d.162.1.1 (A:145-313) Malate dehydrogenase {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 169
Score = 105 bits (262), Expect = 2e-29
Identities = 81/166 (48%), Positives = 94/166 (56%), Gaps = 22/166 (13%)
Query: 62 VTTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTG 121
VTTLDIVRAN FVAE KGL+P V+VPVIGGHAG TIIPLISQ TP V FP DQL LTG
Sbjct: 1 VTTLDIVRANAFVAELKGLDPARVSVPVIGGHAGKTIIPLISQCTPKVDFPQDQLSTLTG 60
Query: 122 RIQ----EAVSLKNGIEKNLGLGK-------LSDFEKERQQFSPFIKTFASFFSPQ---- 166
RIQ E V K G S + + +F
Sbjct: 61 RIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDAMNGKEGVVECSFVKSQETDCPYF 120
Query: 167 -------KNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKGEEFV 205
K GIEKNLG+GK+S FE++++ A+PELK +I KGEEFV
Sbjct: 121 STPLLLGKKGIEKNLGIGKISPFEEKMIAEAIPELKASIKKGEEFV 166
>d2cmda2 d.162.1.1 (A:146-312) Malate dehydrogenase {Escherichia
coli [TaxId: 562]}
Length = 167
Score = 103 bits (258), Expect = 1e-28
Identities = 63/168 (37%), Positives = 89/168 (52%), Gaps = 23/168 (13%)
Query: 62 VTTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTG 121
VTTLDI+R+NTFVAE KG P +V VPVIGGH+G+TI+PL+SQ VSF + ++ LT
Sbjct: 1 VTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQVPG-VSFTEQEVADLTK 59
Query: 122 RIQEAVSLKNGIEKNLGLGKLSDFEK----------------------ERQQFSPFIKTF 159
RIQ A + + G LS + + + + F
Sbjct: 60 RIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFF 119
Query: 160 ASFFSPQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKGEEFVAK 207
+ KNG+E+ +G LS FE+ ++ + LKK+IA G+EFV K
Sbjct: 120 SQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKKDIALGQEFVNK 167
>d1hyha2 d.162.1.1 (A:167-329) L-2-hydroxyisocapronate
dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId:
1583]}
Length = 163
Score = 77.6 bits (190), Expect = 9e-19
Identities = 24/164 (14%), Positives = 44/164 (26%), Gaps = 23/164 (14%)
Query: 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGR 122
T LD R V EA L+P V+ +G H G + S A
Sbjct: 2 TLLDTARMQRAVGEAFDLDPRSVSGYNLGEH-GNSQFVAWSTVRVMGQPIVTLADAGDID 60
Query: 123 IQEAVSLKNGIEKNLGLGKLS-----------------DFEKERQQFSPFIKTFASFFSP 165
+ + GK S + S
Sbjct: 61 LAAIEEEARKGGFTVLNGKGYTSYGVATSAIRIAKAVMADAHAELVVSNRRDDMGMYLSY 120
Query: 166 Q----KNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKGEEFV 205
++G+ L L+ E+E + + +++ + + +
Sbjct: 121 PAIIGRDGVLAETTL-DLTTDEQEKLLQSRDYIQQRFDEIVDTL 163
>d1guza2 d.162.1.1 (A:143-305) Malate dehydrogenase {Chlorobium
vibrioforme [TaxId: 1098]}
Length = 163
Score = 75.5 bits (185), Expect = 4e-18
Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 25/160 (15%)
Query: 65 LDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVS----FPDDQLKALT 120
LD R +F+A G++ D+N V+GGH + + + P + + L
Sbjct: 4 LDAARFRSFIAMELGVSMQDINACVLGGHGDAMVPVVKYTTVAGIPISDLLPAETIDKLV 63
Query: 121 GRIQEAV----------SLKNGIEKNLGLGKLSDFEKERQQFSPFIKTFAS-------FF 163
R + S ++ S ++ +
Sbjct: 64 ERTRNGGAEIVEHLKQGSAFYAPASSVVEMVESIVLDRKRVLPCAVGLEGQYGIDKTFVG 123
Query: 164 SP---QKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAK 200
P +NG+E+ + L + +L++ + + +N
Sbjct: 124 VPVKLGRNGVEQIYEI-NLDQADLDLLQKSAKIVDENCKM 162
>d5mdha2 d.162.1.1 (A:155-333) Malate dehydrogenase {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 179
Score = 75.9 bits (186), Expect = 5e-18
Identities = 28/180 (15%), Positives = 51/180 (28%), Gaps = 35/180 (19%)
Query: 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGR 122
T LD RA +A G+ DV +I G+ T P ++ A + + +
Sbjct: 1 TRLDHNRAKAQIALKLGVTSDDVKNVIIWGNHSSTQYPDVNHAKVKLQAKEVGVYEAVKD 60
Query: 123 --------IQEAVSLKNGIEKNLGLG----------------------KLSDFEKERQQF 152
I + K L
Sbjct: 61 DSWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDG 120
Query: 153 SPFIKTFASFFS-P---QKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKGEEFVAKS 208
+ + +S P + + GL ++DF +E + EL + EF++ +
Sbjct: 121 NSYGVPDDLLYSFPVTIKDKTWKIVEGL-PINDFSREKMDLTAKELAEEKETAFEFLSSA 179
>d1ldna2 d.162.1.1 (A:163-330) Lactate dehydrogenase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 168
Score = 75.3 bits (184), Expect = 6e-18
Identities = 22/167 (13%), Positives = 45/167 (26%), Gaps = 29/167 (17%)
Query: 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPD--------- 113
T LD R + E + P +V+ +IG H + +
Sbjct: 1 TILDTARFRFLLGEYFSVAPQNVHAYIIGEHGDTELPVWSQAYIGVMPIRKLVESKGEEA 60
Query: 114 ----DQLKALTGRIQEAVSLK---------------NGIEKNLGLGKLSDFEKERQQFSP 154
+++ + K + L+ +
Sbjct: 61 QKDLERIFVNVRDAAYQIIEKKGATYYGIAMGLARVTRAILHNENAILTVSAYLDGLYGE 120
Query: 155 FIKTFASFFSPQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKG 201
+NGI + + + +L+D EK + LK +A+
Sbjct: 121 RDVYIGVPAVINRNGIREVIEI-ELNDDEKNRFHHSAATLKSVLARA 166
>d1llda2 d.162.1.1 (A:150-319) Lactate dehydrogenase
{Bifidobacterium longum, strain am101-2 [TaxId: 216816]}
Length = 170
Score = 74.9 bits (183), Expect = 9e-18
Identities = 24/169 (14%), Positives = 44/169 (26%), Gaps = 33/169 (19%)
Query: 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGR 122
T LD R +A+ G+N +V+ + G H + S V D
Sbjct: 1 TNLDSARLRFLIAQQTGVNVKNVHAYIAGEHGDSEVPLWESATIGGVPMSDWTPLPGHDP 60
Query: 123 IQEAVSLKNGIEKNLGLGKLSDFEKERQQFSPFIKTFA---------------------- 160
+ + E K ++ +
Sbjct: 61 LDADKREEIHQEVKNA-AYKIINGKGATNYAIGMSGVDIIEAVLHDTNRILPVSSMLKDF 119
Query: 161 ------SFFSP---QKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAK 200
P + G+ + +SD E +K + LK+ A+
Sbjct: 120 HGISDICMSVPTLLNRQGVNNTINT-PVSDKELAALKRSAETLKETAAQ 167
>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli
[TaxId: 562]}
Length = 145
Score = 73.5 bits (180), Expect = 2e-17
Identities = 40/61 (65%), Positives = 50/61 (81%)
Query: 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLF 60
M R DLFN NA IV+++++ VA+ PKA IGII+NPVN+TV IAAEVLKKAGV+D +LF
Sbjct: 85 MDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLF 144
Query: 61 G 61
G
Sbjct: 145 G 145
>d1hyea2 d.162.1.1 (A:146-313) MJ0490, lactate/malate dehydrogenase
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 168
Score = 74.1 bits (181), Expect = 2e-17
Identities = 24/167 (14%), Positives = 54/167 (32%), Gaps = 28/167 (16%)
Query: 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGR 122
T LD +R +A+ G++ +V +IG H G +++PL+S + +
Sbjct: 3 THLDSLRFKVAIAKFFGVHIDEVRTRIIGEH-GDSMVPLLSATSIGGIPIQKFERFKELP 61
Query: 123 IQEAVSLKNGIEKNLGLGKLSDFEKERQQFSPFIKTFAS--------------------- 161
I E + + + K ++ +
Sbjct: 62 IDEIIEDVKTKGEQIIRLKGGSEFGPAAAILNVVRCIVNNEKRLLTLSAYVDGEFDGIRD 121
Query: 162 -FFSPQ----KNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKGEE 203
++GIE+ + + +L E + + +KK + +
Sbjct: 122 VCIGVPVKIGRDGIEEVVSI-ELDKDEIIAFRKSAEIIKKYCEEVKN 167
>d1o6za2 d.162.1.1 (A:163-330) Malate dehydrogenase {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 161
Score = 73.7 bits (180), Expect = 2e-17
Identities = 28/162 (17%), Positives = 52/162 (32%), Gaps = 24/162 (14%)
Query: 60 FGVTTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKAL 119
FG LD R ++E +V ++G H G +P+ S+ + + P+
Sbjct: 1 FG-GRLDSARFRYVLSEEFDAPVQNVEGTILGEH-GDAQVPVFSKVSVDGTDPEFSGDEK 58
Query: 120 TGRIQEAVSLKNGIEKNL---------------------GLGKLSDFEKERQQFSPFIKT 158
+ + + + L K +F
Sbjct: 59 EQLLGDLQESAMDVIERKGATEWGPARGVAHMVEAILHDTGEVLPASVKLEGEFGHEDTA 118
Query: 159 FASFFSPQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAK 200
F S NG+E+ + L D+E++L+ A +L K
Sbjct: 119 FGVPVSLGSNGVEEIVEW-DLDDYEQDLMADAAEKLSDQYDK 159
>d1llca2 d.162.1.1 (A:165-334) Lactate dehydrogenase {Lactobacillus
casei [TaxId: 1582]}
Length = 172
Score = 73.7 bits (180), Expect = 3e-17
Identities = 24/167 (14%), Positives = 50/167 (29%), Gaps = 29/167 (17%)
Query: 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIP--------------LISQATPS 108
T+LD R +AE ++ V+ ++G H + +
Sbjct: 1 TSLDTARFRQSIAEMVNVDARSVHAYIMGEHGDTEFPVWSHANIGGVTIAEWVKAHPEIK 60
Query: 109 VSFPDDQLKALTGRIQEAVSLKNGIEKNLGLG----KLSDFEKERQQFSPFIK------T 158
+ + E + LK + + E +
Sbjct: 61 EDKLVKMFEDVRDAAYEIIKLKGATFYGIATALARISKAILNDENAVLPLSVYMDGQYGI 120
Query: 159 FASFFSPQ----KNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKG 201
+ +NGI+ L + L+D E+E ++ + +LKK +
Sbjct: 121 NDLYIGTPAVINRNGIQNILEI-PLTDHEEESMQKSASQLKKVLTDA 166
>d1uxja2 d.162.1.1 (A:144-307) Malate dehydrogenase {Chloroflexus
aurantiacus [TaxId: 1108]}
Length = 164
Score = 71.7 bits (175), Expect = 1e-16
Identities = 28/158 (17%), Positives = 50/158 (31%), Gaps = 25/158 (15%)
Query: 65 LDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGRIQ 124
LD R TF+A G++ DV ++GGH + + + +I
Sbjct: 4 LDAARYRTFIAMEAGVSVKDVQAMLMGGHGDEMVPLPRFSTISGIPVSEFIAPDRLAQIV 63
Query: 125 EAV--------SLKNGIEKNLGLGK---------LSDFEKERQQFSPFIKTF----ASFF 163
E +L L D ++ + + F
Sbjct: 64 ERTRKGGGEIVNLLKTGSAYYAPAAATAQMVEAVLKDKKRVMPVAAYLTGQYGLNDIYFG 123
Query: 164 SP---QKNGIEKNLGLGKLSDFEKELVKAAVPELKKNI 198
P G+EK L L L++ E L+ A+ ++ +
Sbjct: 124 VPVILGAGGVEKILEL-PLNEEEMALLNASAKAVRATL 160
>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 144
Score = 70.0 bits (171), Expect = 4e-16
Identities = 39/61 (63%), Positives = 48/61 (78%)
Query: 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLF 60
MTRDDLFNTNA+IV + A A+ P A+I IISNPVNST+PI AEV KK GV++P ++F
Sbjct: 84 MTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVNSTIPITAEVFKKHGVYNPNKIF 143
Query: 61 G 61
G
Sbjct: 144 G 144
>d1ez4a2 d.162.1.1 (A:163-334) Lactate dehydrogenase {Lactobacillus
pentosus [TaxId: 1589]}
Length = 171
Score = 70.6 bits (172), Expect = 4e-16
Identities = 26/167 (15%), Positives = 50/167 (29%), Gaps = 30/167 (17%)
Query: 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGR 122
T+LD R + + ++P V+ ++G H G + S AT D K
Sbjct: 1 TSLDSSRLRVALGKQFNVDPRSVDAYIMGEH-GDSEFAAYSTATIGTRPVRDVAKEQGVS 59
Query: 123 IQEAVSLKNGIEKNLG----------------------------LGKLSDFEKERQQFSP 154
+ L++G+ L Q+
Sbjct: 60 DDDLAKLEDGVRNKAYDIINLKGATFYGIGTALMRISKAILRDENAVLPVGAYMDGQYGL 119
Query: 155 FIKTFASFFSPQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKG 201
+ G+++ + LS E + ++ + LKK + G
Sbjct: 120 NDIYIGTPAIIGGTGLKQIIES-PLSADELKKMQDSAATLKKVLNDG 165
>d1a5za2 d.162.1.1 (A:164-333) Lactate dehydrogenase {Thermotoga
maritima [TaxId: 2336]}
Length = 172
Score = 69.5 bits (169), Expect = 1e-15
Identities = 32/166 (19%), Positives = 58/166 (34%), Gaps = 29/166 (17%)
Query: 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPD--------- 113
T LD R T +A+ G +P V+V VIG H + + +
Sbjct: 2 TVLDTARLRTLIAQHCGFSPRSVHVYVIGEHGDSEVPVWSGAMIGGIPLQNMCQVCQKCD 61
Query: 114 --------DQLKALTGRIQE---------AVSLKNGIEKNLGLGKLSDFEKERQQFSPFI 156
++ K I E A+++ + +E K + +
Sbjct: 62 SKILENFAEKTKRAAYEIIERKGATHYAIALAVADIVESIFFDEKRVLTLSVYLEDYLGV 121
Query: 157 K--TFASFFSPQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAK 200
K + + K+G+E+ L L L++ E E + + LK I +
Sbjct: 122 KDLCISVPVTLGKHGVERILEL-NLNEEELEAFRKSASILKNAINE 166
>d1ldma2 d.162.1.1 (A:161-329) Lactate dehydrogenase {Dogfish
(Squalus acanthias) [TaxId: 7797]}
Length = 169
Score = 68.3 bits (166), Expect = 3e-15
Identities = 23/174 (13%), Positives = 46/174 (26%), Gaps = 39/174 (22%)
Query: 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGR 122
LD R + E G++ + VIG H S+ L G
Sbjct: 3 CNLDSARFRYLMGERLGVHSCSCHGWVIGEHGDSVPSVWSGMNVASIKLHP-----LDGT 57
Query: 123 IQEAVSLKNGIEKNLGLGKLSDFEKERQQFSPFIKT------------------------ 158
++ K + + K ++ +
Sbjct: 58 NKDKQDWKKLHKDVVDSAYEVIKLKGYTSWAIGLSVADLAETIMKNLCRVHPVSTMVKDF 117
Query: 159 --------FASFFSPQKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAKGEEF 204
+ +GI + + KL E++ ++ + L +I K +F
Sbjct: 118 YGIKDNVFLSLPCVLNDHGISNIVKM-KLKPNEEQQLQKSATTL-WDIQKDLKF 169
>d1y6ja2 d.162.1.1 (A:149-317) Lactate dehydrogenase {Clostridium
thermocellum [TaxId: 1515]}
Length = 169
Score = 65.2 bits (158), Expect = 4e-14
Identities = 21/167 (12%), Positives = 52/167 (31%), Gaps = 30/167 (17%)
Query: 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSF----PDDQLKA 118
T LD +R ++E G++ +V+ +IG H + + D +
Sbjct: 1 TVLDSIRFRYLLSEKLGVDVKNVHGYIIGEHGDSQLPLWSCTHIAGKNINEYIDDPKCNF 60
Query: 119 LTGRIQEAVSLKNGIEKNLGLGKLSDFEKERQQFSPFIKTF------------------- 159
++ + K + + + ++T
Sbjct: 61 TEEDKKKIAEDVKTAGATIIKNKGATYYGIAVSINTIVETLLKNQNTIRTVGTVINGMYG 120
Query: 160 --ASFFSPQ----KNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAK 200
S G+++ L L+ E+E ++ + ++KK + +
Sbjct: 121 IEDVAISLPSIVNSEGVQEVLQF-NLTPEEEEALRFSAEQVKKVLNE 166
>d1t2da2 d.162.1.1 (A:151-315) Lactate dehydrogenase {Malaria
parasite (Plasmodium falciparum) [TaxId: 5833]}
Length = 165
Score = 64.5 bits (156), Expect = 7e-14
Identities = 24/162 (14%), Positives = 54/162 (33%), Gaps = 28/162 (17%)
Query: 65 LDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPD---------DQ 115
LD R ++++ + P DVN ++G H ++ + + +
Sbjct: 3 LDTSRLKYYISQKLNVCPRDVNAHIVGAHGNKMVLLKRYITVGGIPLQEFINNKLISDAE 62
Query: 116 LKALTGRIQEAVSLKNGIEKNLGLGKLSDFEKERQQFSPFIKTFASFFSPQ--------- 166
L+A+ R + + + + + + + +K +
Sbjct: 63 LEAIFDRTVNTALEIVNLHASPYVAPAAAIIEMAESYLKDLKKVLICSTLLEGQYGHSDI 122
Query: 167 ---------KNGIEKNLGLGKLSDFEKELVKAAVPELKKNIA 199
NG+E+ + L +L+ EK A+ E K+ A
Sbjct: 123 FGGTPVVLGANGVEQVIEL-QLNSEEKAKFDEAIAETKRMKA 163
>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus
thermophilus [TaxId: 274]}
Length = 154
Score = 64.3 bits (156), Expect = 7e-14
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 1 MTRDDLFNTNASIVRDIIKAVAEVAPK-ALIGIISNPVNSTVPIAAEVLKKAGVFDPRR 58
M R DL N I + +A+AEVA K + ++ NP N+ IA K A +PR
Sbjct: 96 MERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIA---YKNAPGLNPRN 151
>d1pzga2 d.162.1.1 (A:164-334) Lactate dehydrogenase {Toxoplasma
gondii [TaxId: 5811]}
Length = 174
Score = 64.1 bits (155), Expect = 1e-13
Identities = 25/161 (15%), Positives = 46/161 (28%), Gaps = 30/161 (18%)
Query: 65 LDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGR-- 122
LD R +VA+A ++P DV VIG H + + +
Sbjct: 4 LDSGRFRRYVADALSVSPRDVQATVIGTHGDCMVPLVRYITVNGYPIQKFIKDGVVTEKQ 63
Query: 123 ----IQEAVSLKNGIEKNLGLGKLSDF-----------------------EKERQQFSPF 155
+ I + LG G ++
Sbjct: 64 LEEIAEHTKVSGGEIVRFLGQGSAYYAPAASAVAMATSFLNDEKRVIPCSVYCNGEYGLK 123
Query: 156 IKTFASFFSPQKNGIEKNLGLGKLSDFEKELVKAAVPELKK 196
GIE+ + L +L++ EK+ + +V ++
Sbjct: 124 DMFIGLPAVIGGAGIERVIEL-ELNEEEKKQFQKSVDDVMA 163
>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium
longum, strain am101-2 [TaxId: 216816]}
Length = 143
Score = 62.7 bits (152), Expect = 2e-13
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLF 60
+R +L +I++ I+ + +VAP A+ +I+NPV+ IA V +K ++F
Sbjct: 85 QSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVD----IATHVAQKLTGLPENQIF 140
Query: 61 G 61
G
Sbjct: 141 G 141
>d1i0za2 d.162.1.1 (A:161-332) Lactate dehydrogenase {Human (Homo
sapiens), heart isoform (H chain) [TaxId: 9606]}
Length = 172
Score = 63.3 bits (153), Expect = 2e-13
Identities = 22/166 (13%), Positives = 44/166 (26%), Gaps = 35/166 (21%)
Query: 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGR 122
LD R +AE G++P+ + ++G H ++ VS + + T
Sbjct: 3 CNLDSARFRYLMAEKLGIHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDN 62
Query: 123 IQEAVSLKNGIEKNLGLGKLSDFEKERQQFSPFIKT------------------------ 158
E + K + + K ++ +
Sbjct: 63 DSE--NWKEVHKMVVESAYEVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKGM 120
Query: 159 --------FASFFSPQKNGIEKNLGLGKLSDFEKELVKAAVPELKK 196
+ G+ + KL D E +K + L
Sbjct: 121 YGIENEVFLSLPCILNARGLTSVINQ-KLKDDEVAQLKKSADTLWD 165
>d1b8pa2 d.162.1.1 (A:159-329) Malate dehydrogenase {Aquaspirillum
arcticum [TaxId: 87645]}
Length = 171
Score = 63.3 bits (153), Expect = 2e-13
Identities = 20/163 (12%), Positives = 40/163 (24%), Gaps = 29/163 (17%)
Query: 65 LDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVS-----------FPD 113
LD RA + +A G + + + G+ T+ A + D
Sbjct: 3 LDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMYADYRYAQIDGASVKDMINDDAWNRD 62
Query: 114 DQLKALTGRIQEAVSLKNGIEKNLGLGKLSDFEKE-------------RQQFSPFIKTFA 160
L + R + + D + +
Sbjct: 63 TFLPTVGKRGAAIIDARGVSSAASAANAAIDHIHDWVLGTAGKWTTMGIPSDGSYGIPEG 122
Query: 161 SFFSP----QKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIA 199
F + + GL + F +E + + EL +
Sbjct: 123 VIFGFPVTTENGEYKIVQGL-SIDAFSQERINVTLNELLEEQN 164
>d2ldxa2 d.162.1.1 (A:160-331) Lactate dehydrogenase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 172
Score = 63.3 bits (153), Expect = 2e-13
Identities = 22/168 (13%), Positives = 43/168 (25%), Gaps = 31/168 (18%)
Query: 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPD--------- 113
LD R + E G+NPT + V+G H ++ V+
Sbjct: 3 CNLDSARFRYLIGEKLGVNPTSCHGWVLGEHGDSSVPIWSGVNVAGVTLKSLNPAIGTDK 62
Query: 114 -----DQLKALTGRIQEAVSLKNG------------IEKNLGLGKLSDFEKERQQFSPFI 156
+ V G + +++
Sbjct: 63 NKQHWKNVHKQVVEGGYEVLDMKGYTSWAIGLSVTDLARSILKNLKRVHPVTTLVKGFHG 122
Query: 157 KTFASFFSPQ----KNGIEKNLGLGKLSDFEKELVKAAVPELKKNIAK 200
F S ++GI + + ++ E+ L+K + L
Sbjct: 123 IKEEVFLSIPCVLGESGITDFVKV-NMTAEEEGLLKKSADTLWNMQKN 169
>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 142
Score = 62.4 bits (151), Expect = 3e-13
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLF 60
MTR DL + NA I++DI K + E AP++ I +++NP++ I K +F
Sbjct: 85 MTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPMDVMTYIM----WKESGKPRNEVF 140
Query: 61 GV 62
G+
Sbjct: 141 GM 142
>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium
vibrioforme [TaxId: 1098]}
Length = 142
Score = 60.9 bits (147), Expect = 1e-12
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLF 60
MTR+DL NA IV+++ + + + +I ++SNP++ +A R+
Sbjct: 85 MTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPLDIMTHVA----WVRSGLPKERVI 140
Query: 61 GV 62
G+
Sbjct: 141 GM 142
>d1y7ta2 d.162.1.1 (A:154-332) Malate dehydrogenase {Thermus
thermophilus [TaxId: 274]}
Length = 173
Score = 60.9 bits (147), Expect = 2e-12
Identities = 19/165 (11%), Positives = 45/165 (27%), Gaps = 29/165 (17%)
Query: 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGR 122
T LD RA +A+ G + + G+ T+ P + A + +
Sbjct: 2 TRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSSTMFPDLFHAEVDGRPALELVDMEWYE 61
Query: 123 IQEAVSLKNGIEKNLGLGKLS-------------------DFEKERQQFS-----PFIKT 158
++ + S E + + +
Sbjct: 62 KVFIPTVAQRGAAIIQARGASSAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIP 121
Query: 159 FASFFSP----QKNGIEKNLGLGKLSDFEKELVKAAVPELKKNIA 199
+S + GL ++++F ++ ++ EL +
Sbjct: 122 EGIVYSFPVTAKDGAYRVVEGL-EINEFARKRMEITAQELLDEME 165
>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 142
Score = 59.6 bits (144), Expect = 2e-12
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Query: 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLF 60
TR DL NA I+ DI ++ E + SNPV+ + L +AG ++
Sbjct: 86 QTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPVD----LLNRHLYEAGDRSREQVI 141
Query: 61 G 61
G
Sbjct: 142 G 142
>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite
(Plasmodium falciparum) [TaxId: 5833]}
Length = 150
Score = 57.8 bits (139), Expect = 1e-11
Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLF 60
RDDL N I+ +I + + P A I +++NPV+ V + + ++
Sbjct: 92 WNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDVMVQLL----HQHSGVPKNKII 147
Query: 61 GV 62
G+
Sbjct: 148 GL 149
>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii
[TaxId: 5811]}
Length = 154
Score = 57.8 bits (139), Expect = 2e-11
Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLF 60
+R+DL N+ I+R+I + + + PK I +++NP++ V + E +
Sbjct: 97 WSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLDCMVKVMCEASG----VPTNMIC 152
Query: 61 G 61
G
Sbjct: 153 G 153
>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 159
Score = 57.3 bits (138), Expect = 3e-11
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLF 60
TR DL N +I++ I+ V + +P I +++NPV+ + K F R+
Sbjct: 103 QTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVTNPVDILTYVVW----KISGFPVGRVI 158
Query: 61 G 61
G
Sbjct: 159 G 159
>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus
aurantiacus [TaxId: 1108]}
Length = 142
Score = 56.2 bits (135), Expect = 5e-11
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLF 60
M+R+DL NA I R I A ++P A+I +++NP+++ +AAEV F R+
Sbjct: 85 MSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPLDAMTYLAAEVSG----FPKERVI 140
Query: 61 G 61
G
Sbjct: 141 G 141
>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga
maritima [TaxId: 2336]}
Length = 140
Score = 55.9 bits (134), Expect = 6e-11
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLF 60
TR L NA ++++I + V++ AP +++ +++NPV+ + K DPR++F
Sbjct: 83 ETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVD----VLTYFFLKESGMDPRKVF 138
Query: 61 G 61
G
Sbjct: 139 G 139
>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum
vulgare), chloroplast [TaxId: 4558]}
Length = 175
Score = 56.5 bits (136), Expect = 6e-11
Identities = 17/62 (27%), Positives = 24/62 (38%), Gaps = 4/62 (6%)
Query: 1 MTRDDLFNTNASIVRDIIKAVAEVAPK-ALIGIISNPVNSTVPIAAEVLKKAGVFDPRRL 59
M R L + N I D KA+ VA K + ++ NP N+ I K A +
Sbjct: 116 MERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPCNTNALICL---KNAPDIPAKNF 172
Query: 60 FG 61
Sbjct: 173 HA 174
>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium
thermocellum [TaxId: 1515]}
Length = 142
Score = 55.8 bits (134), Expect = 7e-11
Identities = 13/61 (21%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Query: 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLF 60
TR DL N I +++ + + + +I ++SNPV+ + +K ++
Sbjct: 84 ETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVDIITYMI----QKWSGLPVGKVI 139
Query: 61 G 61
G
Sbjct: 140 G 140
>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase,
L-HICDH {Lactobacillus confusus [TaxId: 1583]}
Length = 146
Score = 54.7 bits (131), Expect = 2e-10
Identities = 11/61 (18%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Query: 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLF 60
R +S+V+ + + E ++ +ISNPV+ + + + F ++
Sbjct: 89 GDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISNPVD----VITALFQHVTGFPAHKVI 144
Query: 61 G 61
G
Sbjct: 145 G 145
>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus
pentosus [TaxId: 1589]}
Length = 146
Score = 54.3 bits (130), Expect = 3e-10
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Query: 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLF 60
+R DL N N +I+ I+K V + + + +NPV+ I K F R+
Sbjct: 88 ESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPVD----ILTYATWKFSGFPKERVI 143
Query: 61 G 61
G
Sbjct: 144 G 144
>d7mdha2 d.162.1.1 (A:198-385) Malate dehydrogenase {Sorghum
(Sorghum vulgare), chloroplast [TaxId: 4558]}
Length = 188
Score = 55.0 bits (132), Expect = 3e-10
Identities = 29/164 (17%), Positives = 47/164 (28%), Gaps = 30/164 (18%)
Query: 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGR 122
T LD RA +A G+ V+ I G+ T +P A + +K
Sbjct: 1 TRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKIDGRPVKEVIKRTKWL 60
Query: 123 IQEAV-SLKNGIEKNLGLGKLSDF-----------------EKERQQFSPFIK------- 157
+E +++ + S E FS +
Sbjct: 61 EEEFTITVQKRGGALIQKWGRSSAASTAVSIADAIKSLVTPTPEGDWFSTGVYTTGNPYG 120
Query: 158 -TFASFFS-P---QKNGIEKNLGLGKLSDFEKELVKAAVPELKK 196
FS P + +G + DF E +K + EL
Sbjct: 121 IAEDIVFSMPCRSKGDGDYELATDVSNDDFLWERIKKSEAELLA 164
>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 145
Score = 53.6 bits (128), Expect = 5e-10
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Query: 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLF 60
M+R DL TNA IV K +AE+ + +I+NPV+ A F+ ++F
Sbjct: 90 MSRMDLAKTNAKIVGKYAKKIAEICDTKIF-VITNPVDVMTYKAL----VDSKFERNQVF 144
Query: 61 G 61
G
Sbjct: 145 G 145
>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 148
Score = 52.8 bits (126), Expect = 9e-10
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Query: 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLF 60
TR DL + N +I R I+++V + L + +NPV+ I K R+
Sbjct: 90 ETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVD----ILTYATWKFSGLPHERVI 145
Query: 61 G 61
G
Sbjct: 146 G 146
>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo
sapiens), heart isoform (H chain) [TaxId: 9606]}
Length = 160
Score = 52.7 bits (126), Expect = 1e-09
Identities = 14/61 (22%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Query: 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLF 60
+R +L N ++ + II + + +P +I ++SNPV+ + K R+
Sbjct: 104 ESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVSNPVDILTYVT----WKLSGLPKHRVI 159
Query: 61 G 61
G
Sbjct: 160 G 160
>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 154
Score = 51.2 bits (122), Expect = 4e-09
Identities = 13/63 (20%), Positives = 24/63 (38%), Gaps = 4/63 (6%)
Query: 1 MTRDDLFNTNASIVRDIIKAVAEVAPKA-LIGIISNPVNSTVPIAAEVLKKAGVFDPRRL 59
M R DL N I + A+ + A K+ + ++ NP N+ A++
Sbjct: 95 MERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPANTNCLTASKSAPS---IPKENF 151
Query: 60 FGV 62
+
Sbjct: 152 SCL 154
>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga
maritima [TaxId: 2336]}
Length = 171
Score = 43.6 bits (102), Expect = 3e-06
Identities = 7/47 (14%), Positives = 16/47 (34%)
Query: 3 RDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLK 49
DI + + +++PKA +NP+ + +
Sbjct: 120 YTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEGTTLVTRTVP 166
>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 169
Score = 40.0 bits (93), Expect = 5e-05
Identities = 10/61 (16%), Positives = 22/61 (36%), Gaps = 6/61 (9%)
Query: 1 MTRDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKKAGVFDPRRLF 60
++ DII+ + E+ P A + +NP + E + + ++
Sbjct: 113 PGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAG----MVTEAVLR--YTKQEKVV 166
Query: 61 G 61
G
Sbjct: 167 G 167
>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga
maritima [TaxId: 2336]}
Length = 162
Score = 38.5 bits (89), Expect = 2e-04
Identities = 7/80 (8%), Positives = 15/80 (18%), Gaps = 25/80 (31%)
Query: 1 MTRDDLFNTNASIVRDI-------------------IKAVAEVAPKALIGIISNPVNSTV 41
D+ ++ A I +NP
Sbjct: 87 RENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTSNATIVNFTNPSG--- 143
Query: 42 PIAAEVLKKAGVFDPRRLFG 61
E ++ + + G
Sbjct: 144 -HITEFVRN--YLEYEKFIG 160
>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA
{Bacillus subtilis [TaxId: 1423]}
Length = 167
Score = 36.9 bits (85), Expect = 5e-04
Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
Query: 3 RDDLFNTNASIVRDIIKAVAEVAPKALIGIISNPVNSTVPIAAEVLKK 50
+ V +I+ + + +P A + SNP I AE ++
Sbjct: 115 GIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAA----IVAEATRR 158
>d1ojua2 d.162.1.1 (A:164-331) Lactate dehydrogenase {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 152
Score = 34.9 bits (80), Expect = 0.002
Identities = 27/155 (17%), Positives = 47/155 (30%), Gaps = 24/155 (15%)
Query: 63 TTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLISQATPSVSFPDDQLKALTGR 122
LD R + A N + IG H G ++ S A + ++
Sbjct: 2 NQLDSQRLKERLYNAGARNIRRAWI--IGEH-GDSMFVAKSLADFDGEVDWEAVENDVRF 58
Query: 123 IQEAVSLKNGIEKNLGLGKLSDF--------EKERQQFSPFIKT--------FASFFSPQ 166
+ V + G G E S ++
Sbjct: 59 VAAEVIKRKGAT-IFGPAVAIYRMVKAVVEDTGEIIPTSMILQGEYGIENVAVGVPAKLG 117
Query: 167 KNGIEK-NLGLGKLSDFEKELVKAAVPELKKNIAK 200
KNG E ++ KLSD E E ++ + L++ + +
Sbjct: 118 KNGAEVADI---KLSDEEIEKLRNSAKILRERLEE 149
>d1urva_ a.1.1.2 (A:) Cytoglobin {Human (Homo sapiens) [TaxId:
9606]}
Length = 154
Score = 28.5 bits (63), Expect = 0.33
Identities = 8/31 (25%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 178 KLSDFEKELVKAAVPELKKNIAK-GEEFVAK 207
+LS+ E++ V+A L N G + +
Sbjct: 1 ELSEAERKAVQAMWARLYANSEDVGVAILVR 31
>d1wmua_ a.1.1.2 (A:) Hemoglobin, alpha-chain {Aldabra giant
tortoise (Geochelone gigantea) [TaxId: 167804]}
Length = 141
Score = 27.8 bits (61), Expect = 0.57
Identities = 5/30 (16%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 179 LSDFEKELVKAAVPELKKNIAK-GEEFVAK 207
L++ +K+L++ ++ ++ G E + +
Sbjct: 2 LTEDDKQLIQHVWEKVLEHQEDFGAEALER 31
>d1cqxa1 a.1.1.2 (A:1-150) Flavohemoglobin, N-terminal domain
{Alcaligenes eutrophus [TaxId: 106590]}
Length = 150
Score = 26.9 bits (59), Expect = 1.1
Identities = 8/29 (27%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
Query: 179 LSDFEKELVKAAVPELKKNIAKGEEFVAK 207
L+ K++VKA P L ++ G + +
Sbjct: 2 LTQKTKDIVKATAPVLAEH---GYDIIKC 27
>d2gdma_ a.1.1.2 (A:) Leghemoglobin {Yellow lupin (Lupinus luteus)
[TaxId: 3873]}
Length = 153
Score = 26.7 bits (58), Expect = 1.4
Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 177 GKLSDFEKELVKAAVPELKKNIAK-GEEFVAK 207
G L++ + LVK++ E NI K F
Sbjct: 1 GALTESQAALVKSSWEEFNANIPKHTHRFFIL 32
>d3d1ka1 a.1.1.2 (A:1-142) Hemoglobin, alpha-chain {Antarctic fish
(Trematomus newnesi) [TaxId: 35730]}
Length = 142
Score = 26.6 bits (58), Expect = 1.4
Identities = 8/30 (26%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 179 LSDFEKELVKAAVPELKKNIAK-GEEFVAK 207
LSD +K V+A ++ K+ G + +++
Sbjct: 2 LSDKDKAAVRALWSKIGKSSDAIGNDALSR 31
>d1fsla_ a.1.1.2 (A:) Leghemoglobin {Soybean (Glycine max), isoform
A [TaxId: 3847]}
Length = 143
Score = 26.2 bits (57), Expect = 2.1
Identities = 6/30 (20%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 179 LSDFEKELVKAAVPELKKNIAK-GEEFVAK 207
++ + LV ++ K NI + F
Sbjct: 3 FTEKQDALVSSSFEAFKANIPQYSVVFYTS 32
>d1cb8a3 b.30.5.2 (A:336-599) Chondroitinase AC {Pedobacter
heparinus (Flavobacterium heparinum) [TaxId: 984]}
Length = 264
Score = 26.8 bits (59), Expect = 2.1
Identities = 15/75 (20%), Positives = 26/75 (34%), Gaps = 3/75 (4%)
Query: 53 VFDPRRLFGVTTLDIVRANTFVAEAKGLNPTDVNVPVIGGHAGITIIPLIS---QATPSV 109
V++ ++ G+T+ D + D V G G + L QA +
Sbjct: 68 VWEWDKIPGITSRDYLTDRPLTKLWGEQGSNDFAGGVSDGVYGASAYALDYDSLQAKKAW 127
Query: 110 SFPDDQLKALTGRIQ 124
F D ++ L I
Sbjct: 128 FFFDKEIVCLGAGIN 142
>d1xq5a_ a.1.1.2 (A:) Hemoglobin, alpha-chain {Yellow perch (Perca
flavescens) [TaxId: 8167]}
Length = 142
Score = 26.2 bits (57), Expect = 2.2
Identities = 7/30 (23%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 179 LSDFEKELVKAAVPELKKNIAK-GEEFVAK 207
LS +K+ VKA ++ + G + +++
Sbjct: 2 LSSKDKDTVKALWGKIADKAEEIGSDALSR 31
>d1lhta_ a.1.1.2 (A:) Myoglobin {Loggerhead sea turtle (Caretta
caretta) [TaxId: 8467]}
Length = 153
Score = 25.8 bits (56), Expect = 3.2
Identities = 7/30 (23%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 179 LSDFEKELVKAAVPELKKNIAK-GEEFVAK 207
LSD E V +++ +++ G+E + +
Sbjct: 2 LSDDEWNHVLGIWAKVEPDLSAHGQEVIIR 31
>d1hlba_ a.1.1.2 (A:) Hemoglobin, different isoforms {Caudina
arenicola, also known as Molpadia arenicola [TaxId:
7698]}
Length = 157
Score = 25.4 bits (55), Expect = 3.6
Identities = 6/32 (18%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 177 GKLSDFEKELVKAAVPELKKNIAK-GEEFVAK 207
G L+ +K++V+ +L +N + +
Sbjct: 10 GDLTLAQKKIVRKTWHQLMRNKTSFVTDVFIR 41
>d1d8ua_ a.1.1.2 (A:) Non-symbiotic plant hemoglobin {Rice (Oryza
sativa) [TaxId: 4530]}
Length = 165
Score = 25.5 bits (55), Expect = 4.0
Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 179 LSDFEKELVKAAVPELKKNIAK-GEEFVAK 207
S+ ++ LV + LKK+ A F K
Sbjct: 13 FSEEQEALVLKSWAILKKDSANIALRFFLK 42
>d1a6ma_ a.1.1.2 (A:) Myoglobin {Sperm whale (Physeter catodon)
[TaxId: 9755]}
Length = 151
Score = 25.4 bits (55), Expect = 4.4
Identities = 7/30 (23%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 179 LSDFEKELVKAAVPELKKNIAK-GEEFVAK 207
LS+ E +LV +++ ++A G++ + +
Sbjct: 2 LSEGEWQLVLHVWAKVEADVAGHGQDILIR 31
>d1cg5a_ a.1.1.2 (A:) Hemoglobin, alpha-chain {Cartilaginous fish
akaei (Dasyatis akajei) [TaxId: 31902]}
Length = 141
Score = 25.0 bits (54), Expect = 4.6
Identities = 7/30 (23%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 179 LSDFEKELVKAAVPELKKNIAK-GEEFVAK 207
LS K+ ++ +K N G + +A+
Sbjct: 2 LSSQNKKAIEELGNLIKANAEAWGADALAR 31
>d1hlma_ a.1.1.2 (A:) Hemoglobin, different isoforms {Caudina
arenicola, also known as Molpadia arenicola [TaxId:
7698]}
Length = 158
Score = 25.4 bits (55), Expect = 4.7
Identities = 6/33 (18%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 176 LGKLSDFEKELVKAAVPELKKNIAK-GEEFVAK 207
+G L+ EK+L+++ +L + + +
Sbjct: 9 VGDLTPAEKDLIRSTWDQLMTHRTGFVADVFIR 41
>d1scta_ a.1.1.2 (A:) Hemoglobin I {Ark clam (Scapharca
inaequivalvis) [TaxId: 6561]}
Length = 149
Score = 25.1 bits (54), Expect = 5.3
Identities = 5/30 (16%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 179 LSDFEKELVKAAVPELKKNIAK-GEEFVAK 207
S+ K ++ + L +I G ++
Sbjct: 10 GSEAIKANLRRSWGVLSADIEATGLMLMSN 39
>d2lhba_ a.1.1.2 (A:) Lamprey globin {Sea lamprey (Petromyzon
marinus) [TaxId: 7757]}
Length = 149
Score = 25.0 bits (54), Expect = 5.7
Identities = 7/30 (23%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 179 LSDFEKELVKAAVPELKKNIAK-GEEFVAK 207
LS EK +++A + G + + K
Sbjct: 11 LSAAEKTKIRSAWAPVYSTYETSGVDILVK 40
>d1gcva_ a.1.1.2 (A:) Hemoglobin, alpha-chain {Houndshark (Mustelus
griseus) [TaxId: 89020]}
Length = 140
Score = 24.6 bits (53), Expect = 6.4
Identities = 7/30 (23%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 179 LSDFEKELVKAAVPELKKNIAK-GEEFVAK 207
+ EK+ + L K+ G E +A+
Sbjct: 2 FTACEKQTIGKIAQVLAKSPEAYGAECLAR 31
>d1vhba_ a.1.1.2 (A:) Bacterial dimeric hemoglobin {Vitreoscilla
stercoraria [TaxId: 61]}
Length = 144
Score = 24.9 bits (54), Expect = 6.4
Identities = 8/29 (27%), Positives = 12/29 (41%), Gaps = 3/29 (10%)
Query: 179 LSDFEKELVKAAVPELKKNIAKGEEFVAK 207
L ++KA VP LK++ G
Sbjct: 1 LDQQTINIIKATVPVLKEH---GVTITTT 26
>d1b0ba_ a.1.1.2 (A:) Hemoglobin I {Clam (Lucina pectinata) [TaxId:
29163]}
Length = 142
Score = 24.7 bits (53), Expect = 6.5
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 179 LSDFEKELVKAAVPELKKNIAK-GEEFVAK 207
LS +K+ VK++ + G EF
Sbjct: 2 LSAAQKDNVKSSWAKASAAWGTAGPEFFMA 31
>d1spga_ a.1.1.2 (A:) Hemoglobin, alpha-chain {Fish (Leiostomus
xanthurus) [TaxId: 59837]}
Length = 143
Score = 24.7 bits (53), Expect = 6.9
Identities = 9/30 (30%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 179 LSDFEKELVKAAVPELKKNIAK-GEEFVAK 207
LS +K VKA +++ A+ G E + +
Sbjct: 2 LSATDKARVKALWDKIEGKSAELGAEALGR 31
>d2dn3a1 a.1.1.2 (A:2-141) Hemoglobin, alpha-chain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 140
Score = 24.6 bits (53), Expect = 7.0
Identities = 9/30 (30%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 179 LSDFEKELVKAAVPELKKNIAK-GEEFVAK 207
LS +K VKAA ++ + + G E + +
Sbjct: 1 LSPADKTNVKAAWGKVGAHAGEYGAEALER 30
>d1outa_ a.1.1.2 (A:) Hemoglobin, alpha-chain {Trout (Oncorhynchus
mykiss) [TaxId: 8022]}
Length = 142
Score = 24.6 bits (53), Expect = 7.7
Identities = 7/30 (23%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 179 LSDFEKELVKAAVPELKKNIAK-GEEFVAK 207
L+ +K +VKA ++ G E + +
Sbjct: 2 LTAKDKSVVKAFWGKISGKADVVGAEALGR 31
>d1gvha1 a.1.1.2 (A:1-146) Flavohemoglobin, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 146
Score = 24.6 bits (53), Expect = 7.9
Identities = 8/29 (27%), Positives = 11/29 (37%), Gaps = 3/29 (10%)
Query: 179 LSDFEKELVKAAVPELKKNIAKGEEFVAK 207
L VKA +P L + G + A
Sbjct: 2 LDAQTIATVKATIPLLVET---GPKLTAH 27
>d1lj9a_ a.4.5.28 (A:) Transcriptional regulator SlyA {Enterococcus
faecalis [TaxId: 1351]}
Length = 144
Score = 24.6 bits (53), Expect = 8.0
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 176 LGKLSDFEKELVKAAVPELKKNIAKGEEFVAK 207
L LS+ E + + ++KN+++ EFV K
Sbjct: 112 LQGLSEVEISQLADYLVRMRKNVSEDWEFVKK 143
>d3sdha_ a.1.1.2 (A:) Hemoglobin I {Ark clam (Scapharca
inaequivalvis) [TaxId: 6561]}
Length = 145
Score = 24.3 bits (52), Expect = 8.2
Identities = 3/31 (9%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 178 KLSDFEKELVKAAVPELKKNIAK-GEEFVAK 207
+L+ K+ ++ + + + G +
Sbjct: 8 QLTADVKKDLRDSWKVIGSDKKGNGVALMTT 38
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.135 0.369
Gapped
Lambda K H
0.267 0.0548 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 753,690
Number of extensions: 35051
Number of successful extensions: 203
Number of sequences better than 10.0: 1
Number of HSP's gapped: 182
Number of HSP's successfully gapped: 100
Length of query: 208
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 127
Effective length of database: 1,295,466
Effective search space: 164524182
Effective search space used: 164524182
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (23.8 bits)