Query psy9936
Match_columns 315
No_of_seqs 511 out of 3306
Neff 10.9
Searched_HMMs 29240
Date Fri Aug 16 23:25:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9936.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9936hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1got_B GT-beta; complex (GTP-b 100.0 6E-44 2E-48 304.0 35.8 262 4-267 48-339 (340)
2 1vyh_C Platelet-activating fac 100.0 2.1E-44 7E-49 314.4 33.2 262 6-268 103-408 (410)
3 2ynn_A Coatomer subunit beta'; 100.0 8.3E-43 2.8E-47 292.4 37.4 258 4-262 6-294 (304)
4 2pbi_B Guanine nucleotide-bind 100.0 4.6E-43 1.6E-47 300.1 35.6 263 4-267 57-353 (354)
5 3ow8_A WD repeat-containing pr 100.0 2.8E-43 9.4E-48 297.4 32.3 257 10-267 32-317 (321)
6 3frx_A Guanine nucleotide-bind 100.0 2.1E-42 7.3E-47 291.8 33.8 262 5-268 11-314 (319)
7 4g56_B MGC81050 protein; prote 100.0 6.6E-43 2.3E-47 299.4 29.4 263 10-273 42-345 (357)
8 3ow8_A WD repeat-containing pr 100.0 8.4E-42 2.9E-46 288.3 35.1 237 6-243 75-319 (321)
9 3iz6_a 40S ribosomal protein R 100.0 1.1E-42 3.8E-47 300.5 26.1 262 6-268 61-372 (380)
10 4gqb_B Methylosome protein 50; 100.0 3.5E-42 1.2E-46 293.0 28.8 258 10-269 30-329 (344)
11 3fm0_A Protein CIAO1; WDR39,SG 100.0 8.4E-42 2.9E-46 291.3 30.0 266 5-270 9-334 (345)
12 1vyh_C Platelet-activating fac 100.0 1.4E-40 4.7E-45 290.3 35.1 237 6-243 145-409 (410)
13 2xzm_R RACK1; ribosome, transl 100.0 3E-40 1E-44 281.5 36.1 263 4-268 14-337 (343)
14 4ery_A WD repeat-containing pr 100.0 9.8E-40 3.4E-44 274.5 35.7 263 4-267 16-308 (312)
15 4gqb_B Methylosome protein 50; 100.0 2.2E-40 7.6E-45 282.0 31.9 231 10-243 82-329 (344)
16 2hes_X YDR267CP; beta-propelle 100.0 5.4E-40 1.8E-44 278.4 32.2 264 3-268 6-325 (330)
17 3zwl_B Eukaryotic translation 100.0 1.6E-39 5.5E-44 278.4 34.7 270 3-273 24-348 (369)
18 1got_B GT-beta; complex (GTP-b 100.0 4.2E-39 1.4E-43 274.1 36.8 237 5-242 91-340 (340)
19 4aow_A Guanine nucleotide-bind 100.0 5.1E-39 1.7E-43 272.7 34.2 263 6-269 33-335 (340)
20 2ymu_A WD-40 repeat protein; u 100.0 7.7E-39 2.6E-43 290.7 36.7 254 10-267 303-576 (577)
21 1nr0_A Actin interacting prote 100.0 2.4E-39 8.3E-44 296.1 32.8 259 10-269 147-565 (611)
22 1nr0_A Actin interacting prote 100.0 1.6E-39 5.6E-44 297.3 31.5 264 6-270 54-354 (611)
23 3dm0_A Maltose-binding peripla 100.0 4.4E-39 1.5E-43 298.6 34.3 262 6-268 377-690 (694)
24 2ynn_A Coatomer subunit beta'; 100.0 1.8E-38 6E-43 266.1 34.3 237 5-242 49-299 (304)
25 1erj_A Transcriptional repress 100.0 9.2E-39 3.1E-43 277.2 33.7 258 9-268 63-386 (393)
26 1erj_A Transcriptional repress 100.0 2E-38 7E-43 275.1 35.5 231 12-243 125-387 (393)
27 3ei3_B DNA damage-binding prot 100.0 6E-39 2E-43 277.3 30.7 258 6-267 68-378 (383)
28 2pm7_B Protein transport prote 100.0 2E-38 6.9E-43 264.8 30.7 238 6-243 4-283 (297)
29 3frx_A Guanine nucleotide-bind 100.0 1.1E-37 3.9E-42 262.9 35.0 235 6-243 60-315 (319)
30 1gxr_A ESG1, transducin-like e 100.0 6.5E-38 2.2E-42 265.3 32.7 255 10-267 51-333 (337)
31 2pbi_B Guanine nucleotide-bind 100.0 2.5E-37 8.4E-42 264.5 35.9 236 6-242 101-354 (354)
32 1k8k_C P40, ARP2/3 complex 41 100.0 4.2E-38 1.4E-42 270.3 31.1 233 10-243 8-272 (372)
33 4e54_B DNA damage-binding prot 100.0 5.8E-39 2E-43 282.2 26.2 257 10-269 119-428 (435)
34 2ymu_A WD-40 repeat protein; u 100.0 4.1E-37 1.4E-41 279.4 36.2 258 6-268 257-536 (577)
35 2xzm_R RACK1; ribosome, transl 100.0 1.2E-36 4.2E-41 259.2 36.6 233 7-243 72-338 (343)
36 3dw8_B Serine/threonine-protei 100.0 8.4E-38 2.9E-42 275.1 29.8 231 10-243 28-371 (447)
37 2pm9_A Protein WEB1, protein t 100.0 2.5E-38 8.4E-43 275.9 26.1 259 10-269 67-412 (416)
38 4g56_B MGC81050 protein; prote 100.0 5.5E-38 1.9E-42 268.9 27.4 232 10-243 94-341 (357)
39 3bg1_A Protein SEC13 homolog; 100.0 4.2E-38 1.4E-42 265.2 24.4 234 10-243 13-291 (316)
40 3fm0_A Protein CIAO1; WDR39,SG 100.0 7.8E-37 2.7E-41 260.6 31.8 234 10-243 61-333 (345)
41 3dwl_C Actin-related protein 2 100.0 8.3E-39 2.8E-43 275.6 19.5 237 5-243 5-279 (377)
42 4ery_A WD repeat-containing pr 100.0 5.6E-36 1.9E-40 251.6 35.2 236 7-243 61-310 (312)
43 1r5m_A SIR4-interacting protei 100.0 5E-37 1.7E-41 267.8 29.2 260 10-271 45-361 (425)
44 2hes_X YDR267CP; beta-propelle 100.0 1.4E-36 4.9E-41 257.4 30.9 232 10-243 58-326 (330)
45 3mkq_A Coatomer beta'-subunit; 100.0 2.9E-36 1E-40 284.2 34.9 258 4-262 6-294 (814)
46 2pm9_A Protein WEB1, protein t 100.0 5.5E-38 1.9E-42 273.7 21.0 261 10-270 12-336 (416)
47 1gxr_A ESG1, transducin-like e 100.0 2.8E-37 9.6E-42 261.4 24.7 259 10-269 9-294 (337)
48 3k26_A Polycomb protein EED; W 100.0 9.7E-37 3.3E-41 261.0 27.8 256 10-268 18-363 (366)
49 3vl1_A 26S proteasome regulato 100.0 2.1E-36 7.3E-41 264.2 30.0 249 11-260 98-409 (420)
50 1sq9_A Antiviral protein SKI8; 100.0 7.6E-37 2.6E-41 265.0 26.7 255 10-268 16-392 (397)
51 3iz6_a 40S ribosomal protein R 100.0 3.9E-37 1.3E-41 265.9 24.7 238 5-243 102-373 (380)
52 4aez_A CDC20, WD repeat-contai 100.0 2.3E-36 7.7E-41 262.9 28.2 254 13-271 96-380 (401)
53 3odt_A Protein DOA1; ubiquitin 100.0 1E-35 3.6E-40 249.3 31.3 257 4-270 11-295 (313)
54 3gre_A Serine/threonine-protei 100.0 1.3E-36 4.3E-41 267.2 26.7 237 5-243 56-357 (437)
55 3dm0_A Maltose-binding peripla 100.0 1.2E-35 4E-40 275.7 34.3 234 7-243 426-691 (694)
56 3vl1_A 26S proteasome regulato 100.0 1.5E-37 5.1E-42 271.5 20.3 256 13-270 59-364 (420)
57 3jrp_A Fusion protein of prote 100.0 2.5E-35 8.5E-40 253.4 32.3 237 7-243 7-285 (379)
58 4h5i_A Guanine nucleotide-exch 100.0 1.2E-35 4.1E-40 255.0 29.9 188 54-243 136-341 (365)
59 1yfq_A Cell cycle arrest prote 100.0 1.2E-35 4.1E-40 252.2 28.2 248 10-263 11-315 (342)
60 4h5i_A Guanine nucleotide-exch 100.0 1.5E-35 5.3E-40 254.4 27.9 196 11-206 134-344 (365)
61 1sq9_A Antiviral protein SKI8; 100.0 2E-35 6.7E-40 256.1 28.5 238 4-243 55-393 (397)
62 3f3f_A Nucleoporin SEH1; struc 100.0 5.3E-35 1.8E-39 248.0 30.6 234 10-243 11-335 (351)
63 3k26_A Polycomb protein EED; W 100.0 4.4E-36 1.5E-40 256.9 23.4 231 10-243 69-364 (366)
64 3i2n_A WD repeat-containing pr 100.0 1.4E-35 4.6E-40 253.2 26.2 257 10-268 18-350 (357)
65 3sfz_A APAF-1, apoptotic pepti 100.0 5.2E-35 1.8E-39 287.3 33.7 261 7-268 611-989 (1249)
66 3v7d_B Cell division control p 100.0 9.6E-35 3.3E-39 257.1 32.1 258 5-268 115-418 (464)
67 4a11_B DNA excision repair pro 100.0 8.1E-35 2.8E-39 252.6 30.8 261 10-271 43-365 (408)
68 3zwl_B Eukaryotic translation 100.0 4.7E-34 1.6E-38 244.4 35.1 237 5-243 68-344 (369)
69 2j04_B YDR362CP, TAU91; beta p 100.0 2.9E-36 9.8E-41 269.2 21.3 256 10-268 207-514 (524)
70 3sfz_A APAF-1, apoptotic pepti 100.0 3.3E-36 1.1E-40 295.8 23.0 257 10-268 961-1246(1249)
71 2j04_B YDR362CP, TAU91; beta p 100.0 9.8E-36 3.3E-40 265.8 23.8 237 5-243 128-426 (524)
72 3ei3_B DNA damage-binding prot 100.0 2E-34 7E-39 248.8 31.2 230 10-243 118-380 (383)
73 2j04_A TAU60, YPL007P, hypothe 100.0 2.8E-36 9.7E-41 264.6 19.5 237 10-263 15-290 (588)
74 2aq5_A Coronin-1A; WD40 repeat 100.0 1.1E-34 3.8E-39 252.2 29.5 233 10-243 81-340 (402)
75 1r5m_A SIR4-interacting protei 100.0 9.3E-35 3.2E-39 253.5 29.0 237 5-243 143-423 (425)
76 3mkq_A Coatomer beta'-subunit; 100.0 3E-34 1E-38 270.6 34.0 257 5-262 49-323 (814)
77 4aez_A CDC20, WD repeat-contai 100.0 7.9E-34 2.7E-38 246.8 33.7 230 10-243 134-378 (401)
78 3mmy_A MRNA export factor; mRN 100.0 2.2E-34 7.7E-39 246.3 29.0 232 10-242 39-343 (368)
79 3v7d_B Cell division control p 100.0 1.2E-33 4E-38 250.2 34.5 233 5-243 156-419 (464)
80 2aq5_A Coronin-1A; WD40 repeat 100.0 1.6E-34 5.5E-39 251.2 28.3 249 12-260 36-333 (402)
81 2xyi_A Probable histone-bindin 100.0 2.9E-34 9.8E-39 251.9 29.4 235 10-244 128-409 (430)
82 1k8k_C P40, ARP2/3 complex 41 100.0 5.7E-34 2E-38 244.6 30.4 239 4-243 45-359 (372)
83 4gga_A P55CDC, cell division c 100.0 2.6E-34 8.8E-39 251.4 28.4 256 10-270 105-394 (420)
84 3dwl_C Actin-related protein 2 100.0 4.5E-35 1.6E-39 252.3 22.0 193 10-204 55-280 (377)
85 3lrv_A PRE-mRNA-splicing facto 100.0 5.4E-35 1.8E-39 249.0 21.3 242 17-263 43-325 (343)
86 2pm7_B Protein transport prote 100.0 5.6E-34 1.9E-38 237.9 26.5 219 50-269 8-283 (297)
87 4gga_A P55CDC, cell division c 100.0 8E-33 2.7E-37 242.0 34.8 237 5-245 141-395 (420)
88 3odt_A Protein DOA1; ubiquitin 100.0 5.1E-33 1.7E-37 232.9 32.1 227 10-244 59-295 (313)
89 3jro_A Fusion protein of prote 100.0 3.7E-34 1.3E-38 267.5 27.5 235 10-244 9-284 (753)
90 3dw8_B Serine/threonine-protei 100.0 7.5E-34 2.6E-38 249.9 28.0 198 11-210 94-377 (447)
91 3i2n_A WD repeat-containing pr 100.0 9.6E-34 3.3E-38 241.7 27.7 235 9-244 64-352 (357)
92 2vdu_B TRNA (guanine-N(7)-)-me 100.0 8E-34 2.7E-38 250.5 27.9 247 10-259 4-373 (450)
93 1pgu_A Actin interacting prote 100.0 3.4E-33 1.2E-37 255.1 32.0 238 3-243 55-326 (615)
94 2oaj_A Protein SNI1; WD40 repe 100.0 2.1E-33 7.2E-38 266.3 31.3 201 8-211 15-247 (902)
95 1pgu_A Actin interacting prote 100.0 1.8E-33 6.2E-38 256.9 28.6 253 10-268 18-325 (615)
96 4e54_B DNA damage-binding prot 100.0 8.2E-34 2.8E-38 249.3 24.9 233 10-243 164-428 (435)
97 4aow_A Guanine nucleotide-bind 100.0 5.1E-32 1.7E-36 229.6 35.1 234 7-243 82-335 (340)
98 4ggc_A P55CDC, cell division c 100.0 1.6E-32 5.5E-37 230.5 30.9 252 13-269 28-313 (318)
99 3vu4_A KMHSV2; beta-propeller 100.0 1.1E-32 3.7E-37 235.8 29.3 247 10-267 19-332 (355)
100 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1E-31 3.5E-36 236.6 35.3 248 5-263 153-430 (445)
101 3gre_A Serine/threonine-protei 100.0 8.5E-33 2.9E-37 242.8 28.0 208 7-216 108-369 (437)
102 1p22_A F-BOX/WD-repeat protein 100.0 3.2E-32 1.1E-36 239.2 31.5 249 10-271 133-414 (435)
103 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.2E-32 7.5E-37 241.3 29.9 223 11-234 103-372 (450)
104 2j04_A TAU60, YPL007P, hypothe 100.0 6E-34 2E-38 249.9 19.4 228 10-261 85-351 (588)
105 3bg1_A Protein SEC13 homolog; 100.0 1.5E-33 5.1E-38 237.4 18.7 220 50-269 12-291 (316)
106 2xyi_A Probable histone-bindin 100.0 4.5E-32 1.5E-36 237.9 28.1 268 5-272 40-411 (430)
107 2oaj_A Protein SNI1; WD40 repe 100.0 4.1E-32 1.4E-36 257.5 29.0 184 10-195 58-297 (902)
108 3jrp_A Fusion protein of prote 100.0 8E-32 2.7E-36 231.5 26.6 223 45-268 4-284 (379)
109 1l0q_A Surface layer protein; 100.0 2.1E-30 7.2E-35 224.2 35.6 235 6-243 27-273 (391)
110 4ggc_A P55CDC, cell division c 100.0 2.7E-30 9.1E-35 216.9 35.2 235 6-244 62-314 (318)
111 1p22_A F-BOX/WD-repeat protein 100.0 4.4E-31 1.5E-35 231.9 30.6 228 5-243 167-412 (435)
112 1yfq_A Cell cycle arrest prote 100.0 7.5E-32 2.6E-36 228.8 24.9 227 10-242 56-321 (342)
113 2ovr_B FBW7, F-BOX/WD repeat p 100.0 6.4E-31 2.2E-35 231.5 31.7 251 6-269 113-389 (445)
114 4gq1_A NUP37; propeller, trans 100.0 1.1E-31 3.9E-36 232.6 23.8 224 18-242 97-386 (393)
115 3bws_A Protein LP49; two-domai 100.0 1.2E-30 4.1E-35 228.7 28.4 257 7-266 119-427 (433)
116 3vu4_A KMHSV2; beta-propeller 100.0 1.3E-30 4.4E-35 223.0 27.7 227 11-243 59-334 (355)
117 3f3f_A Nucleoporin SEH1; struc 100.0 1.1E-30 3.8E-35 221.3 26.4 206 7-213 53-344 (351)
118 1l0q_A Surface layer protein; 100.0 8.8E-30 3E-34 220.3 32.2 242 23-267 3-271 (391)
119 4a11_B DNA excision repair pro 100.0 2.3E-30 7.9E-35 224.5 28.4 231 10-243 99-403 (408)
120 3lrv_A PRE-mRNA-splicing facto 100.0 1.1E-30 3.7E-35 222.4 24.5 223 11-241 77-329 (343)
121 4gq1_A NUP37; propeller, trans 100.0 1.4E-30 4.8E-35 225.7 25.1 259 4-263 9-382 (393)
122 3bws_A Protein LP49; two-domai 100.0 4.1E-29 1.4E-33 218.9 31.5 231 10-243 169-430 (433)
123 2w18_A PALB2, fancn, partner a 100.0 1E-29 3.6E-34 210.3 24.2 191 11-203 112-355 (356)
124 3mmy_A MRNA export factor; mRN 100.0 2.2E-29 7.5E-34 215.3 26.9 229 37-266 24-341 (368)
125 3jro_A Fusion protein of prote 100.0 7.3E-30 2.5E-34 238.5 25.5 219 50-268 8-282 (753)
126 2w18_A PALB2, fancn, partner a 100.0 2.1E-28 7.1E-33 202.6 28.6 225 14-242 43-354 (356)
127 3vgz_A Uncharacterized protein 100.0 2.4E-26 8.1E-31 195.7 31.4 251 9-261 39-334 (353)
128 2hqs_A Protein TOLB; TOLB, PAL 100.0 4.6E-26 1.6E-30 198.7 31.0 218 22-243 143-385 (415)
129 2hqs_A Protein TOLB; TOLB, PAL 100.0 3.5E-26 1.2E-30 199.4 29.8 214 10-228 178-409 (415)
130 2ojh_A Uncharacterized protein 100.0 4.7E-26 1.6E-30 188.6 26.5 219 10-230 41-285 (297)
131 2ecf_A Dipeptidyl peptidase IV 100.0 1.3E-26 4.5E-31 216.4 23.3 246 10-258 36-397 (741)
132 1nir_A Nitrite reductase; hemo 99.9 9.6E-25 3.3E-29 196.2 30.9 249 7-258 175-496 (543)
133 2ojh_A Uncharacterized protein 99.9 2.2E-25 7.6E-30 184.5 24.3 233 28-262 18-293 (297)
134 1ri6_A Putative isomerase YBHE 99.9 7.9E-25 2.7E-29 185.4 28.1 233 10-242 37-305 (343)
135 1nir_A Nitrite reductase; hemo 99.9 1.5E-24 5.2E-29 194.9 29.9 241 17-259 144-439 (543)
136 1xfd_A DIP, dipeptidyl aminope 99.9 3.1E-26 1.1E-30 213.3 19.5 248 10-260 16-379 (723)
137 2ecf_A Dipeptidyl peptidase IV 99.9 6.6E-26 2.3E-30 211.7 20.2 246 12-260 110-444 (741)
138 3u4y_A Uncharacterized protein 99.9 3.5E-24 1.2E-28 180.9 28.6 242 16-260 3-292 (331)
139 2z3z_A Dipeptidyl aminopeptida 99.9 3.6E-25 1.2E-29 205.7 24.4 246 11-259 82-419 (706)
140 3u4y_A Uncharacterized protein 99.9 1.3E-23 4.4E-28 177.4 30.4 231 10-243 40-302 (331)
141 3vgz_A Uncharacterized protein 99.9 2E-23 6.7E-28 177.7 30.3 217 10-229 88-326 (353)
142 3o4h_A Acylamino-acid-releasin 99.9 1E-24 3.5E-29 198.3 23.1 244 10-262 21-303 (582)
143 1pby_B Quinohemoprotein amine 99.9 1.1E-23 3.8E-28 177.9 27.2 215 23-243 2-308 (337)
144 1jmx_B Amine dehydrogenase; ox 99.9 1.1E-23 3.8E-28 178.8 25.6 223 15-244 4-324 (349)
145 1k32_A Tricorn protease; prote 99.9 6.9E-24 2.4E-28 204.9 25.1 247 10-262 203-493 (1045)
146 1xfd_A DIP, dipeptidyl aminope 99.9 3.6E-24 1.2E-28 199.4 21.8 246 12-258 62-427 (723)
147 1ri6_A Putative isomerase YBHE 99.9 4.3E-23 1.5E-27 174.6 25.5 241 24-266 7-303 (343)
148 2oit_A Nucleoporin 214KDA; NH2 99.9 4.5E-24 1.5E-28 186.9 17.9 194 11-206 37-279 (434)
149 2oit_A Nucleoporin 214KDA; NH2 99.9 1.3E-23 4.5E-28 183.9 19.1 192 32-231 23-255 (434)
150 3hfq_A Uncharacterized protein 99.9 7.2E-22 2.4E-26 168.0 29.2 232 10-242 39-314 (347)
151 1k32_A Tricorn protease; prote 99.9 4.7E-23 1.6E-27 199.1 24.3 226 12-243 246-500 (1045)
152 1pby_B Quinohemoprotein amine 99.9 4.8E-22 1.6E-26 167.8 26.6 200 12-217 35-321 (337)
153 2z3z_A Dipeptidyl aminopeptida 99.9 1.8E-22 6.3E-27 187.5 24.0 231 10-243 120-433 (706)
154 1z68_A Fibroblast activation p 99.9 4.7E-23 1.6E-27 191.9 15.7 225 14-243 19-344 (719)
155 3scy_A Hypothetical bacterial 99.9 1.1E-20 3.6E-25 161.7 29.1 230 10-242 49-334 (361)
156 1jof_A Carboxy-CIS,CIS-muconat 99.9 5.1E-21 1.8E-25 164.0 25.8 231 11-243 40-339 (365)
157 1jmx_B Amine dehydrogenase; ox 99.9 4.5E-21 1.5E-25 162.7 24.2 199 12-217 44-336 (349)
158 1q7f_A NHL, brain tumor CG1071 99.9 1.8E-19 6.2E-24 148.9 32.0 228 11-243 30-278 (286)
159 1z68_A Fibroblast activation p 99.9 2.3E-22 7.8E-27 187.2 13.6 214 12-228 61-367 (719)
160 3fvz_A Peptidyl-glycine alpha- 99.9 5.7E-20 2E-24 155.2 27.1 231 10-243 23-320 (329)
161 3hfq_A Uncharacterized protein 99.9 1E-19 3.4E-24 154.7 27.7 195 10-204 85-316 (347)
162 3pe7_A Oligogalacturonate lyas 99.9 1.4E-20 4.9E-25 162.2 22.7 242 16-260 41-370 (388)
163 3o4h_A Acylamino-acid-releasin 99.9 3.2E-21 1.1E-25 175.3 18.9 211 11-232 65-297 (582)
164 4a5s_A Dipeptidyl peptidase 4 99.9 2.8E-20 9.7E-25 173.6 21.3 215 11-229 17-331 (740)
165 3scy_A Hypothetical bacterial 99.9 7.8E-19 2.7E-23 150.0 26.8 212 10-225 99-360 (361)
166 4a5s_A Dipeptidyl peptidase 4 99.9 6.4E-20 2.2E-24 171.3 21.3 208 14-223 65-370 (740)
167 3c5m_A Oligogalacturonate lyas 99.8 2.1E-19 7.1E-24 155.1 19.8 243 13-260 38-370 (396)
168 1jof_A Carboxy-CIS,CIS-muconat 99.8 1.8E-18 6.2E-23 148.1 25.1 237 24-261 4-330 (365)
169 2gop_A Trilobed protease; beta 99.8 2.9E-18 1E-22 145.5 24.0 211 12-236 60-321 (347)
170 3e5z_A Putative gluconolactona 99.8 1.8E-17 6.2E-22 137.6 27.1 225 10-242 27-283 (296)
171 3pe7_A Oligogalacturonate lyas 99.8 1.5E-18 5.3E-23 149.4 20.3 213 14-229 84-363 (388)
172 1rwi_B Serine/threonine-protei 99.8 3.6E-17 1.2E-21 133.8 26.4 231 12-243 25-262 (270)
173 2oiz_A Aromatic amine dehydrog 99.8 1.4E-17 4.7E-22 142.3 24.5 211 15-229 54-360 (361)
174 3azo_A Aminopeptidase; POP fam 99.8 3.6E-18 1.2E-22 157.5 22.3 230 10-241 23-319 (662)
175 2dg1_A DRP35, lactonase; beta 99.8 2.2E-16 7.5E-21 133.2 30.9 222 10-235 44-300 (333)
176 3no2_A Uncharacterized protein 99.8 3.7E-17 1.3E-21 134.3 25.4 209 21-234 4-231 (276)
177 1q7f_A NHL, brain tumor CG1071 99.8 1.5E-16 5E-21 131.4 28.2 192 11-206 77-281 (286)
178 3azo_A Aminopeptidase; POP fam 99.8 7.9E-18 2.7E-22 155.2 22.2 215 15-232 81-352 (662)
179 2dg1_A DRP35, lactonase; beta 99.8 8.4E-17 2.9E-21 135.8 24.3 230 10-243 5-261 (333)
180 3dsm_A Uncharacterized protein 99.8 3.8E-16 1.3E-20 131.7 27.9 227 11-243 44-300 (328)
181 2xdw_A Prolyl endopeptidase; a 99.8 1.6E-16 5.6E-21 147.6 27.6 230 12-243 126-412 (710)
182 2oiz_A Aromatic amine dehydrog 99.8 9.2E-17 3.2E-21 137.2 23.9 220 20-244 13-333 (361)
183 3fvz_A Peptidyl-glycine alpha- 99.8 1.4E-16 4.6E-21 134.5 24.3 195 11-206 91-323 (329)
184 3c5m_A Oligogalacturonate lyas 99.8 7.7E-17 2.6E-21 139.0 23.3 208 16-229 86-363 (396)
185 2gop_A Trilobed protease; beta 99.8 6.2E-17 2.1E-21 137.3 22.3 211 11-241 15-288 (347)
186 1pjx_A Dfpase, DIISOPROPYLFLUO 99.8 4.6E-16 1.6E-20 130.0 26.3 230 10-243 17-297 (314)
187 3dsm_A Uncharacterized protein 99.8 1.4E-15 4.7E-20 128.2 27.5 213 7-224 80-319 (328)
188 1qks_A Cytochrome CD1 nitrite 99.8 8E-15 2.7E-19 131.8 32.9 236 7-243 193-536 (567)
189 2z2n_A Virginiamycin B lyase; 99.7 4.5E-14 1.5E-18 116.8 34.7 227 10-243 14-253 (299)
190 1qks_A Cytochrome CD1 nitrite 99.7 8.7E-15 3E-19 131.5 32.1 220 20-241 165-417 (567)
191 3g4e_A Regucalcin; six bladed 99.7 7.9E-15 2.7E-19 121.8 28.7 219 12-235 14-262 (297)
192 3e5z_A Putative gluconolactona 99.7 8.2E-15 2.8E-19 121.5 27.1 192 10-206 68-287 (296)
193 3hrp_A Uncharacterized protein 99.7 3.2E-14 1.1E-18 123.4 29.6 226 11-241 131-406 (409)
194 2qc5_A Streptogramin B lactona 99.7 7.6E-13 2.6E-17 109.4 36.0 227 10-243 19-258 (300)
195 2bkl_A Prolyl endopeptidase; m 99.7 1.6E-15 5.4E-20 140.6 21.3 227 12-243 122-395 (695)
196 2z2n_A Virginiamycin B lyase; 99.7 3.8E-13 1.3E-17 111.1 32.9 226 10-242 56-292 (299)
197 2ghs_A AGR_C_1268P; regucalcin 99.7 1.7E-13 5.9E-18 115.2 30.1 216 13-235 51-292 (326)
198 2xdw_A Prolyl endopeptidase; a 99.7 2.3E-14 7.8E-19 133.2 26.3 221 20-242 81-365 (710)
199 3dr2_A Exported gluconolactona 99.7 7.6E-14 2.6E-18 116.3 26.6 221 10-238 44-299 (305)
200 1rwi_B Serine/threonine-protei 99.7 1.9E-14 6.4E-19 117.5 22.1 195 11-206 67-265 (270)
201 2bkl_A Prolyl endopeptidase; m 99.7 6.5E-15 2.2E-19 136.5 21.5 219 19-241 76-345 (695)
202 3no2_A Uncharacterized protein 99.7 1.2E-13 3.9E-18 113.4 26.6 207 5-217 29-263 (276)
203 1xip_A Nucleoporin NUP159; bet 99.7 6.2E-15 2.1E-19 125.5 18.7 168 12-191 39-230 (388)
204 1yr2_A Prolyl oligopeptidase; 99.7 2.3E-14 7.8E-19 133.8 24.3 228 12-243 164-439 (741)
205 1xip_A Nucleoporin NUP159; bet 99.7 5.8E-15 2E-19 125.7 18.3 168 53-233 39-230 (388)
206 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 4.7E-13 1.6E-17 111.6 27.3 194 11-206 71-300 (314)
207 2qc5_A Streptogramin B lactona 99.6 4.4E-12 1.5E-16 104.8 32.7 226 11-242 62-297 (300)
208 2mad_H Methylamine dehydrogena 99.6 1.1E-12 3.7E-17 112.2 29.6 220 17-243 27-348 (373)
209 3g4e_A Regucalcin; six bladed 99.6 9E-13 3.1E-17 109.4 27.2 183 10-194 53-261 (297)
210 2mad_H Methylamine dehydrogena 99.6 3.1E-12 1.1E-16 109.4 29.5 192 15-213 70-357 (373)
211 3sjl_D Methylamine dehydrogena 99.6 1.6E-12 5.5E-17 110.3 24.6 225 15-243 82-361 (386)
212 2qe8_A Uncharacterized protein 99.6 1.5E-12 5.1E-17 110.3 24.3 221 11-233 17-307 (343)
213 3iuj_A Prolyl endopeptidase; h 99.6 6.3E-13 2.1E-17 123.1 22.2 226 12-243 130-403 (693)
214 2ghs_A AGR_C_1268P; regucalcin 99.6 1.3E-11 4.4E-16 103.8 28.2 182 10-195 89-292 (326)
215 1yr2_A Prolyl oligopeptidase; 99.5 1.4E-12 4.8E-17 121.7 24.2 221 19-241 115-389 (741)
216 3dr2_A Exported gluconolactona 99.5 1.3E-11 4.6E-16 102.6 26.4 206 50-260 43-296 (305)
217 3c75_H MADH, methylamine dehyd 99.5 7.5E-12 2.6E-16 108.0 24.7 210 15-227 122-423 (426)
218 3c75_H MADH, methylamine dehyd 99.5 3.5E-12 1.2E-16 110.0 22.1 222 20-243 82-400 (426)
219 1mda_H Methylamine dehydrogena 99.5 9.8E-13 3.3E-17 111.6 17.9 207 15-226 69-366 (368)
220 3sjl_D Methylamine dehydrogena 99.5 1E-11 3.5E-16 105.3 23.1 211 12-227 138-384 (386)
221 2iwa_A Glutamine cyclotransfer 99.5 6.6E-11 2.3E-15 95.3 25.2 193 12-206 22-238 (266)
222 3hrp_A Uncharacterized protein 99.5 3.6E-11 1.2E-15 104.2 24.0 185 16-203 176-408 (409)
223 2hz6_A Endoplasmic reticulum t 99.4 4.7E-14 1.6E-18 120.7 4.8 200 21-229 8-216 (369)
224 2ece_A 462AA long hypothetical 99.4 1.7E-10 5.6E-15 98.8 22.9 215 20-235 93-399 (462)
225 1fwx_A Nitrous oxide reductase 99.4 1.6E-10 5.5E-15 102.2 23.4 217 25-243 18-359 (595)
226 1fwx_A Nitrous oxide reductase 99.4 3.2E-11 1.1E-15 106.6 18.6 210 21-233 100-404 (595)
227 2iwa_A Glutamine cyclotransfer 99.4 3E-10 1E-14 91.4 22.8 194 42-242 9-234 (266)
228 2ece_A 462AA long hypothetical 99.4 7.3E-10 2.5E-14 94.9 25.5 226 33-259 44-399 (462)
229 1npe_A Nidogen, entactin; glyc 99.4 3.2E-09 1.1E-13 86.3 28.7 213 12-228 37-262 (267)
230 1mda_H Methylamine dehydrogena 99.4 5.9E-11 2E-15 100.7 18.5 207 33-245 47-346 (368)
231 2qe8_A Uncharacterized protein 99.3 1.7E-10 5.7E-15 97.7 20.0 191 11-201 67-317 (343)
232 1kb0_A Quinohemoprotein alcoho 99.3 4.3E-10 1.5E-14 103.6 23.7 222 21-243 127-505 (677)
233 2fp8_A Strictosidine synthase; 99.3 9.1E-09 3.1E-13 86.1 29.7 228 11-243 19-311 (322)
234 3nol_A Glutamine cyclotransfer 99.3 1.5E-09 5.1E-14 86.4 23.2 181 11-195 43-245 (262)
235 3iuj_A Prolyl endopeptidase; h 99.3 2.8E-10 9.7E-15 105.4 21.2 187 52-243 129-357 (693)
236 3nol_A Glutamine cyclotransfer 99.3 2.2E-09 7.4E-14 85.5 22.2 187 43-235 32-244 (262)
237 1yiq_A Quinohemoprotein alcoho 99.3 2.2E-09 7.4E-14 99.1 25.2 234 22-256 121-533 (689)
238 1kb0_A Quinohemoprotein alcoho 99.3 1.2E-09 4.2E-14 100.5 23.5 200 31-232 189-536 (677)
239 1npe_A Nidogen, entactin; glyc 99.3 2.5E-08 8.6E-13 81.0 28.6 219 22-243 1-236 (267)
240 3hxj_A Pyrrolo-quinoline quino 99.2 1.4E-09 4.8E-14 91.0 20.4 211 22-242 107-321 (330)
241 3mbr_X Glutamine cyclotransfer 99.2 2.4E-08 8E-13 78.9 25.9 182 10-195 20-224 (243)
242 2p4o_A Hypothetical protein; p 99.2 8.2E-08 2.8E-12 79.7 29.4 220 10-235 31-278 (306)
243 3nok_A Glutaminyl cyclase; bet 99.2 8.6E-09 2.9E-13 82.1 21.9 179 10-193 54-253 (268)
244 3hxj_A Pyrrolo-quinoline quino 99.2 9.3E-10 3.2E-14 92.1 16.6 217 13-243 62-282 (330)
245 1yiq_A Quinohemoprotein alcoho 99.2 6.1E-09 2.1E-13 96.1 23.1 200 31-232 182-534 (689)
246 2hz6_A Endoplasmic reticulum t 99.2 6.1E-12 2.1E-16 107.6 2.6 173 63-243 10-190 (369)
247 3q7m_A Lipoprotein YFGL, BAMB; 99.2 2.7E-08 9.1E-13 85.1 24.4 217 21-243 52-294 (376)
248 3q7m_A Lipoprotein YFGL, BAMB; 99.1 3.4E-08 1.2E-12 84.4 24.9 216 21-243 102-335 (376)
249 3nok_A Glutaminyl cyclase; bet 99.1 1.2E-08 4.1E-13 81.2 19.5 185 43-234 44-253 (268)
250 3mbr_X Glutamine cyclotransfer 99.1 5.2E-08 1.8E-12 76.9 22.8 186 43-234 10-222 (243)
251 3tc9_A Hypothetical hydrolase; 99.1 1.6E-07 5.3E-12 81.8 25.8 151 12-162 138-300 (430)
252 2ad6_A Methanol dehydrogenase 99.0 1.6E-07 5.5E-12 84.7 25.1 221 22-243 115-492 (571)
253 2p4o_A Hypothetical protein; p 99.0 6.1E-07 2.1E-11 74.4 26.3 199 42-243 22-240 (306)
254 3v64_C Agrin; beta propeller, 99.0 2.6E-06 8.8E-11 72.0 29.4 228 11-242 34-272 (349)
255 2ad6_A Methanol dehydrogenase 99.0 1.8E-07 6E-12 84.4 23.5 212 23-236 161-527 (571)
256 4hw6_A Hypothetical protein, I 99.0 6.1E-07 2.1E-11 78.1 26.1 192 12-203 140-372 (433)
257 2fp8_A Strictosidine synthase; 99.0 3.8E-07 1.3E-11 76.2 23.7 191 12-206 81-314 (322)
258 1ijq_A LDL receptor, low-densi 99.0 8.6E-06 2.9E-10 67.8 31.4 217 24-243 3-236 (316)
259 3qqz_A Putative uncharacterize 99.0 2.7E-06 9.3E-11 68.0 26.7 191 10-203 26-251 (255)
260 1w6s_A Methanol dehydrogenase 98.9 8E-07 2.7E-11 80.3 25.6 156 16-171 111-350 (599)
261 4a2l_A BT_4663, two-component 98.9 3.2E-06 1.1E-10 79.5 30.6 223 10-243 356-612 (795)
262 4a2l_A BT_4663, two-component 98.9 2.6E-06 8.8E-11 80.2 29.7 224 10-243 309-569 (795)
263 2xe4_A Oligopeptidase B; hydro 98.9 7.7E-07 2.6E-11 83.1 25.8 190 12-203 175-398 (751)
264 3v65_B Low-density lipoprotein 98.9 4.6E-06 1.6E-10 71.5 28.3 227 13-242 79-315 (386)
265 3v64_C Agrin; beta propeller, 98.9 6E-06 2E-10 69.8 28.5 201 11-214 73-283 (349)
266 1kv9_A Type II quinohemoprotei 98.9 4.1E-07 1.4E-11 83.7 22.5 202 31-234 177-519 (668)
267 3qqz_A Putative uncharacterize 98.9 1.9E-06 6.4E-11 68.9 23.5 189 51-241 26-249 (255)
268 1flg_A Protein (quinoprotein e 98.9 1.1E-06 3.7E-11 79.4 24.6 160 72-233 291-546 (582)
269 3v65_B Low-density lipoprotein 98.9 7.2E-06 2.5E-10 70.3 28.4 213 10-224 115-337 (386)
270 1kv9_A Type II quinohemoprotei 98.8 6.7E-07 2.3E-11 82.3 22.3 221 22-243 117-486 (668)
271 3p5b_L Low density lipoprotein 98.8 1.5E-05 5.2E-10 68.6 29.5 217 24-242 85-317 (400)
272 1ijq_A LDL receptor, low-densi 98.8 2.7E-05 9.4E-10 64.7 30.8 200 11-214 30-246 (316)
273 3amr_A 3-phytase; beta-propell 98.8 5.2E-06 1.8E-10 68.9 24.9 189 22-214 40-272 (355)
274 1k3i_A Galactose oxidase precu 98.8 2.9E-07 9.8E-12 84.7 18.1 243 15-260 190-530 (656)
275 3v9f_A Two-component system se 98.8 8.9E-06 3.1E-10 76.3 28.3 226 10-243 362-609 (781)
276 3sov_A LRP-6, low-density lipo 98.8 2.3E-05 7.8E-10 65.2 27.6 217 24-243 6-236 (318)
277 1w6s_A Methanol dehydrogenase 98.8 3.4E-06 1.2E-10 76.3 24.0 202 30-233 180-533 (599)
278 3kya_A Putative phosphatase; s 98.8 1.1E-05 3.8E-10 70.6 25.5 192 12-203 140-408 (496)
279 3sov_A LRP-6, low-density lipo 98.7 4E-05 1.4E-09 63.8 27.8 202 12-215 36-247 (318)
280 3p5b_L Low density lipoprotein 98.7 8.4E-05 2.9E-09 63.9 31.0 204 10-215 111-329 (400)
281 3v9f_A Two-component system se 98.7 4E-05 1.4E-09 71.9 30.6 227 10-243 312-566 (781)
282 1k3i_A Galactose oxidase precu 98.7 1.4E-06 4.9E-11 80.0 19.2 219 15-235 247-529 (656)
283 2xe4_A Oligopeptidase B; hydro 98.7 1.3E-06 4.3E-11 81.6 18.2 153 53-205 175-354 (751)
284 1flg_A Protein (quinoprotein e 98.7 2.9E-05 9.8E-10 70.2 26.3 221 22-243 117-514 (582)
285 2xbg_A YCF48-like protein; pho 98.7 0.00012 4E-09 61.2 29.1 221 10-239 35-273 (327)
286 2xbg_A YCF48-like protein; pho 98.6 0.00014 4.8E-09 60.7 29.8 222 11-242 80-319 (327)
287 2ism_A Putative oxidoreductase 98.6 4.3E-05 1.5E-09 64.6 24.5 217 11-233 31-332 (352)
288 2p9w_A MAL S 1 allergenic prot 98.6 3.9E-05 1.3E-09 63.2 22.4 201 4-206 5-266 (334)
289 3m0c_C LDL receptor, low-densi 98.6 0.00016 5.6E-09 67.4 29.1 207 24-232 397-618 (791)
290 3m0c_C LDL receptor, low-densi 98.5 0.00053 1.8E-08 64.0 31.6 202 10-213 423-639 (791)
291 2xzh_A Clathrin heavy chain 1; 98.4 0.00042 1.5E-08 56.7 27.9 222 15-240 71-327 (365)
292 4a0p_A LRP6, LRP-6, low-densit 98.4 0.00073 2.5E-08 61.5 29.1 192 12-206 38-238 (628)
293 3a9g_A Putative uncharacterize 98.4 0.0006 2E-08 57.5 26.2 218 11-233 29-329 (354)
294 3tc9_A Hypothetical hydrolase; 98.4 3.3E-05 1.1E-09 67.1 18.8 151 53-205 138-301 (430)
295 1n7d_A LDL receptor, low-densi 98.4 3.1E-06 1.1E-10 78.1 13.0 211 30-242 384-611 (699)
296 4hw6_A Hypothetical protein, I 98.4 0.00012 4E-09 63.7 21.5 150 54-204 141-303 (433)
297 2p9w_A MAL S 1 allergenic prot 98.4 6.3E-05 2.2E-09 61.9 18.5 152 54-206 15-216 (334)
298 4a0p_A LRP6, LRP-6, low-densit 98.3 0.0018 6.2E-08 59.0 29.2 215 23-241 7-233 (628)
299 3s94_A LRP-6, low-density lipo 98.3 0.00059 2E-08 62.0 25.7 195 11-206 40-244 (619)
300 1n7d_A LDL receptor, low-densi 98.3 3.4E-06 1.2E-10 77.9 10.6 212 11-225 406-634 (699)
301 3s94_A LRP-6, low-density lipo 98.3 0.00053 1.8E-08 62.4 24.1 207 24-232 11-229 (619)
302 3amr_A 3-phytase; beta-propell 98.3 0.00033 1.1E-08 58.2 20.4 171 70-243 48-261 (355)
303 1bpo_A Protein (clathrin); cla 98.2 0.0021 7.1E-08 54.8 29.7 222 15-240 70-326 (494)
304 2g8s_A Glucose/sorbosone dehyd 98.2 0.0014 4.8E-08 55.2 23.8 219 11-234 18-341 (353)
305 3kya_A Putative phosphatase; s 98.1 0.00093 3.2E-08 58.6 22.2 193 12-206 187-476 (496)
306 3sre_A PON1, serum paraoxonase 98.1 0.0021 7.3E-08 53.9 22.8 188 11-203 50-296 (355)
307 3sre_A PON1, serum paraoxonase 98.1 0.0024 8.2E-08 53.6 23.0 178 53-233 51-284 (355)
308 2ism_A Putative oxidoreductase 97.9 0.0051 1.7E-07 51.8 22.2 139 52-193 31-221 (352)
309 3sbq_A Nitrous-oxide reductase 97.9 0.0039 1.3E-07 54.8 20.6 219 24-243 72-406 (638)
310 2vpj_A Kelch-like protein 12; 97.9 0.0016 5.5E-08 53.3 17.7 181 21-206 62-279 (301)
311 3pbp_A Nucleoporin NUP82; beta 97.8 0.0044 1.5E-07 52.7 19.2 140 60-201 29-208 (452)
312 3s25_A Hypothetical 7-bladed b 97.8 0.0099 3.4E-07 48.8 21.1 175 16-206 58-256 (302)
313 2vpj_A Kelch-like protein 12; 97.8 0.0052 1.8E-07 50.2 19.7 181 21-206 14-232 (301)
314 3das_A Putative oxidoreductase 97.8 0.012 4.1E-07 49.2 27.3 220 10-233 31-324 (347)
315 3ii7_A Kelch-like protein 7; p 97.8 0.0075 2.6E-07 49.4 20.1 220 23-249 13-276 (306)
316 2xn4_A Kelch-like protein 2; s 97.7 0.0035 1.2E-07 51.4 17.6 181 21-206 61-277 (302)
317 1zgk_A Kelch-like ECH-associat 97.7 0.0043 1.5E-07 51.0 18.2 182 19-206 22-241 (308)
318 3pbp_A Nucleoporin NUP82; beta 97.7 0.0035 1.2E-07 53.4 16.9 139 19-159 29-208 (452)
319 3s25_A Hypothetical 7-bladed b 97.7 0.0038 1.3E-07 51.3 17.0 173 18-206 21-217 (302)
320 3a9g_A Putative uncharacterize 97.6 0.023 8E-07 47.7 24.6 140 52-192 29-215 (354)
321 3ott_A Two-component system se 97.6 0.046 1.6E-06 51.0 30.4 216 10-236 62-299 (758)
322 3ii7_A Kelch-like protein 7; p 97.6 0.006 2E-07 50.0 17.3 181 21-206 55-273 (306)
323 1tl2_A L10, protein (tachylect 97.6 0.016 5.4E-07 44.8 18.6 139 52-197 41-202 (236)
324 2be1_A Serine/threonine-protei 97.6 0.00044 1.5E-08 57.6 9.6 185 23-211 11-236 (339)
325 2xn4_A Kelch-like protein 2; s 97.6 0.018 6.3E-07 46.9 19.6 181 21-206 15-230 (302)
326 4asc_A Kelch repeat and BTB do 97.5 0.014 4.7E-07 48.1 18.8 176 24-206 7-222 (315)
327 3ott_A Two-component system se 97.5 0.066 2.3E-06 49.9 26.9 221 10-243 21-258 (758)
328 4asc_A Kelch repeat and BTB do 97.5 0.016 5.4E-07 47.7 18.0 185 18-206 42-278 (315)
329 1zgk_A Kelch-like ECH-associat 97.4 0.0075 2.6E-07 49.6 15.8 180 21-206 70-288 (308)
330 3ei3_A DNA damage-binding prot 97.4 0.1 3.5E-06 50.9 26.2 205 33-243 808-1060(1158)
331 1tl2_A L10, protein (tachylect 97.4 0.0028 9.5E-08 48.9 11.8 140 11-157 41-204 (236)
332 1xi4_A Clathrin heavy chain; a 97.4 0.0074 2.5E-07 59.0 16.8 220 16-239 71-325 (1630)
333 2woz_A Kelch repeat and BTB do 97.4 0.031 1.1E-06 46.0 18.9 183 18-206 53-288 (318)
334 1cru_A Protein (soluble quinop 97.4 0.035 1.2E-06 48.4 19.8 100 52-151 27-162 (454)
335 3das_A Putative oxidoreductase 97.2 0.048 1.6E-06 45.5 18.2 145 90-234 31-219 (347)
336 3ei3_A DNA damage-binding prot 97.2 0.19 6.5E-06 49.1 27.6 127 33-161 493-634 (1158)
337 2woz_A Kelch repeat and BTB do 97.2 0.07 2.4E-06 43.9 18.9 177 24-206 18-232 (318)
338 2g8s_A Glucose/sorbosone dehyd 97.2 0.015 5.1E-07 48.9 14.9 139 52-191 18-214 (353)
339 2zwa_A Leucine carboxyl methyl 97.2 0.12 4.1E-06 47.7 22.1 186 20-206 396-636 (695)
340 1cru_A Protein (soluble quinop 97.1 0.039 1.3E-06 48.1 17.5 104 90-193 26-162 (454)
341 2uvk_A YJHT; unknown function, 97.0 0.04 1.4E-06 46.2 16.2 188 21-212 65-348 (357)
342 2uvk_A YJHT; unknown function, 96.8 0.08 2.7E-06 44.2 16.5 140 21-161 19-224 (357)
343 2xzh_A Clathrin heavy chain 1; 96.8 0.17 5.7E-06 41.7 23.6 207 32-243 49-288 (365)
344 3sbq_A Nitrous-oxide reductase 96.8 0.27 9.2E-06 43.5 19.7 213 21-234 141-452 (638)
345 1bpo_A Protein (clathrin); cla 96.7 0.23 7.9E-06 42.5 23.7 216 23-243 36-287 (494)
346 1xi4_A Clathrin heavy chain; a 96.4 0.24 8.2E-06 48.9 17.7 207 32-243 48-287 (1630)
347 2zwa_A Leucine carboxyl methyl 96.1 0.27 9.3E-06 45.3 16.4 145 21-166 451-638 (695)
348 3qhy_B Beta-lactamase inhibito 95.2 0.95 3.2E-05 36.5 18.7 217 12-243 25-244 (282)
349 2be1_A Serine/threonine-protei 94.5 0.28 9.7E-06 40.7 9.9 113 103-216 11-140 (339)
350 3qhy_B Beta-lactamase inhibito 93.4 2.5 8.7E-05 33.9 16.3 191 31-236 80-273 (282)
351 2wg3_C Hedgehog-interacting pr 93.4 1.8 6.2E-05 37.6 13.2 104 133-236 14-159 (463)
352 2wg3_C Hedgehog-interacting pr 92.2 5.4 0.00019 34.6 26.6 101 11-111 14-159 (463)
353 3b7f_A Glycosyl hydrolase, BNR 90.5 7.1 0.00024 32.8 21.5 170 24-196 24-254 (394)
354 3b7f_A Glycosyl hydrolase, BNR 90.4 7.3 0.00025 32.7 24.3 171 10-185 54-288 (394)
355 4hvt_A Ritya.17583.B, post-pro 89.8 12 0.00042 34.5 21.5 210 14-228 132-407 (711)
356 3uc1_A DNA gyrase subunit A; D 88.5 9.3 0.00032 31.4 14.8 152 10-161 94-277 (327)
357 4a9v_A PHOX; hydrolase, beta-p 83.2 9.1 0.00031 34.1 9.9 60 134-193 477-549 (592)
358 1suu_A DNA gyrase subunit A; t 83.0 17 0.0006 29.5 20.1 185 19-205 5-231 (312)
359 4gq2_M Nucleoporin NUP120; bet 82.7 7.8 0.00027 37.1 10.2 40 10-49 235-274 (950)
360 3zwu_A Alkaline phosphatase PH 82.7 6.5 0.00022 35.3 9.0 58 135-192 478-548 (592)
361 4gq2_M Nucleoporin NUP120; bet 81.5 38 0.0013 32.4 15.1 38 134-171 237-274 (950)
362 3zwu_A Alkaline phosphatase PH 77.6 11 0.00039 33.7 8.9 58 93-150 478-548 (592)
363 3q6k_A 43.2 kDa salivary prote 76.1 34 0.0012 28.7 27.1 181 12-192 88-341 (381)
364 4a9v_A PHOX; hydrolase, beta-p 73.2 18 0.00063 32.2 8.8 59 11-69 476-548 (592)
365 4fhn_B Nucleoporin NUP120; pro 70.4 10 0.00035 37.1 7.4 37 135-171 240-276 (1139)
366 3no0_A DNA gyrase subunit A; D 67.4 45 0.0015 26.5 17.3 151 10-161 67-244 (276)
367 1zi0_A DNA gyrase subunit A; b 65.7 52 0.0018 26.6 19.7 184 20-205 1-226 (307)
368 3no0_A DNA gyrase subunit A; D 64.8 51 0.0017 26.2 20.4 192 11-205 24-246 (276)
369 1wp5_A Topoisomerase IV; broke 64.2 58 0.002 26.6 18.9 185 20-205 3-225 (323)
370 4fhn_B Nucleoporin NUP120; pro 63.5 6.6 0.00022 38.5 4.5 38 12-49 239-276 (1139)
371 3mez_B Mannose-specific lectin 62.4 32 0.0011 23.0 10.0 18 22-39 24-41 (113)
372 3f7f_A Nucleoporin NUP120; nuc 58.9 19 0.00065 33.1 6.2 36 12-49 223-258 (729)
373 3f7f_A Nucleoporin NUP120; nuc 54.2 20 0.00068 33.0 5.6 35 135-171 224-258 (729)
374 3q6k_A 43.2 kDa salivary prote 50.4 1.1E+02 0.0038 25.6 21.7 217 12-229 27-336 (381)
375 1zvt_A Topoisomerase IV subuni 42.7 1.2E+02 0.0041 23.7 11.3 138 24-162 4-162 (256)
376 3l6v_A GYRA, DNA gyrase subuni 41.2 1.6E+02 0.0053 24.6 19.5 187 16-204 1-264 (370)
377 3mez_A Mannose-specific lectin 40.5 77 0.0026 20.9 6.6 17 22-38 20-36 (111)
378 1suu_A DNA gyrase subunit A; t 38.1 1.6E+02 0.0054 23.8 22.0 152 10-162 46-230 (312)
379 1zvt_A Topoisomerase IV subuni 35.3 1.4E+02 0.0048 23.3 7.3 31 10-40 83-113 (256)
380 3mvd_K Regulator of chromosome 32.3 2.2E+02 0.0076 23.8 21.6 182 14-201 138-370 (423)
381 3uc1_A DNA gyrase subunit A; D 32.3 2E+02 0.007 23.3 20.9 193 12-205 43-279 (327)
382 4gz8_A Semaphorin-3A; multi-do 29.2 2.8E+02 0.0096 25.3 8.9 79 122-200 401-495 (667)
383 1zi0_A DNA gyrase subunit A; b 26.1 2.5E+02 0.0087 22.4 21.4 194 11-205 42-277 (307)
384 1q47_A Semaphorin 3A; beta pro 25.3 2.1E+02 0.0072 25.0 7.2 56 103-158 422-487 (495)
385 1q47_A Semaphorin 3A; beta pro 24.6 2E+02 0.0069 25.1 7.0 55 146-200 423-487 (495)
386 3dzw_A Agglutinin; lectin, man 24.3 1.5E+02 0.0052 19.3 10.5 10 29-38 26-35 (109)
387 3al9_A Plexin-A2; beta-propell 24.1 1.4E+02 0.0047 26.4 5.9 66 135-200 402-476 (539)
388 3mez_B Mannose-specific lectin 22.7 1.7E+02 0.0058 19.2 10.4 26 136-163 59-84 (113)
389 1sqj_A OXG-RCBH, oligoxylogluc 22.3 4.7E+02 0.016 24.3 22.9 142 10-153 14-190 (789)
390 3al9_A Plexin-A2; beta-propell 21.4 2.1E+02 0.0072 25.3 6.6 66 93-158 402-476 (539)
No 1
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=6e-44 Score=303.98 Aligned_cols=262 Identities=16% Similarity=0.198 Sum_probs=231.2
Q ss_pred EEEeeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCC
Q psy9936 4 QFDLDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQ 80 (315)
Q Consensus 4 ~~~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~ 80 (315)
...+.. ..+|.+++|+|++++|++++.||.|++||+.+++....+. |...|.+++|+|++++|++++ |+.|++|++.
T Consensus 48 ~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~ 127 (340)
T 1got_B 48 RRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLK 127 (340)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETT
T ss_pred heeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECc
Confidence 345666 7899999999999999999999999999999998888777 788899999999999999887 8999999985
Q ss_pred CC-----EEEE-eecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCC
Q psy9936 81 GI-----ELHC-LKVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNG 154 (315)
Q Consensus 81 ~~-----~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~ 154 (315)
.. .... ..|...|.++.|++++. +++++.|+.|++||+.+++.+..+.+|.+.|.+++|+|++++|++|+.|+
T Consensus 128 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~ 206 (340)
T 1got_B 128 TREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDA 206 (340)
T ss_dssp TCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred cCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCC
Confidence 42 2222 34668999999998875 88999999999999999999999999999999999999999999999999
Q ss_pred eEEEEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC---CceeEEEccCCeEE
Q psy9936 155 TVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT---PINNLAFSQRGLLA 231 (315)
Q Consensus 155 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~---~v~~~~~s~~g~~~ 231 (315)
.|++||++++.++..+.+|...|++++|+|++++|++|+.|++|++||+++. ..+..+..+. +|.+++|+|+|.++
T Consensus 207 ~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~-~~~~~~~~~~~~~~v~~~~~s~~g~~l 285 (340)
T 1got_B 207 SAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD-QELMTYSHDNIICGITSVSFSKSGRLL 285 (340)
T ss_dssp CEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-EEEEEECCTTCCSCEEEEEECTTSSEE
T ss_pred cEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCC-cEEEEEccCCcccceEEEEECCCCCEE
Confidence 9999999999999999999999999999999999999999999999999987 6666665433 68999999999543
Q ss_pred --EEcCCEEEecCC----------------CceeecccccccccCCcchhhhhh
Q psy9936 232 --TSRGNIVEFLKP----------------PEINFEPRRKANKAGGSVQRAKVK 267 (315)
Q Consensus 232 --~~~~~~i~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~ 267 (315)
++.|+.|++|+. .+++|+|++.++++|+.++.++.+
T Consensus 286 ~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iW 339 (340)
T 1got_B 286 LAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339 (340)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred EEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEec
Confidence 445899999986 578999999999999999877643
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.1e-44 Score=314.41 Aligned_cols=262 Identities=16% Similarity=0.246 Sum_probs=237.1
Q ss_pred EeeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCCCC
Q psy9936 6 DLDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGI 82 (315)
Q Consensus 6 ~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~ 82 (315)
.+.. ..+|++++|+|++.+|++|+.||.|+|||+.+++....+. |...|.+++|+|++++|++++ |+.|++||+.+.
T Consensus 103 ~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~ 182 (410)
T 1vyh_C 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182 (410)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSS
T ss_pred eecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Confidence 4455 7899999999999999999999999999999999888887 889999999999999998887 899999999654
Q ss_pred -EEEEe-ecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCeEEEEc
Q psy9936 83 -ELHCL-KVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNGTVTMWS 160 (315)
Q Consensus 83 -~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d 160 (315)
.+..+ .|...|.+++|+|++.+|++++.|++|++||+.++..+..+.+|...+.++.++|++.+|++|+.|+.|++||
T Consensus 183 ~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd 262 (410)
T 1vyh_C 183 ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262 (410)
T ss_dssp CEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 44444 4568999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcceeEeecccccEEEEEECCC--------------------CCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-Cc
Q psy9936 161 PTVQKPLASLLCHKAGIQSVAVNHT--------------------GTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-PI 219 (315)
Q Consensus 161 ~~~~~~~~~~~~~~~~i~~~~~sp~--------------------g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v 219 (315)
++++++...+.+|...|.+++|+|+ |.+|++|+.|+.|++||++++ .++..+..|. .|
T Consensus 263 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~-~~~~~~~~h~~~v 341 (410)
T 1vyh_C 263 VATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDNWV 341 (410)
T ss_dssp TTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTT-EEEEEEECCSSCE
T ss_pred CCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCC-ceEEEEECCCCcE
Confidence 9999999999999999999999996 679999999999999999998 8888888776 59
Q ss_pred eeEEEccCCe--EEEEcCCEEEecCC----------------CceeecccccccccCCcchhhhhhh
Q psy9936 220 NNLAFSQRGL--LATSRGNIVEFLKP----------------PEINFEPRRKANKAGGSVQRAKVKK 268 (315)
Q Consensus 220 ~~~~~s~~g~--~~~~~~~~i~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (315)
++++|+|+|. +.++.|+.|++|+. ++++|+|++.++++|+.++.++.+.
T Consensus 342 ~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~ 408 (410)
T 1vyh_C 342 RGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408 (410)
T ss_dssp EEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEe
Confidence 9999999994 34456899999987 6789999999999999998877653
No 3
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=8.3e-43 Score=292.37 Aligned_cols=258 Identities=13% Similarity=0.178 Sum_probs=222.4
Q ss_pred EEEeeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCC
Q psy9936 4 QFDLDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQ 80 (315)
Q Consensus 4 ~~~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~ 80 (315)
...+.. .+.|.+++|+|++++|++++.||.|++||+.++..+..+. |..+|.+++|+|++++|++++ |+.|++||+.
T Consensus 6 ~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~ 85 (304)
T 2ynn_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN 85 (304)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT
T ss_pred EEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECC
Confidence 344555 7899999999999999999999999999999999888887 788999999999999999887 8999999995
Q ss_pred -CCEEEEee-cCCceEEEEEcCCCceEEEEcCCCeEEEEEccCC-eEEEEeccCCCCeEEEEEcC-CCCEEEEEcCCCeE
Q psy9936 81 -GIELHCLK-VLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIG-KIVSDFSAKKGKLSVMTQNP-YNACICLGHRNGTV 156 (315)
Q Consensus 81 -~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~-~~~~~~~~~~~~v~~~~~~p-~~~~l~~~~~d~~i 156 (315)
+..+..+. |...|.+++|+|++.+|++++.|++|++||++++ .....+.+|...|.+++|+| ++.+|++|+.|+.|
T Consensus 86 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v 165 (304)
T 2ynn_A 86 TGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTV 165 (304)
T ss_dssp TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEE
T ss_pred CCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeE
Confidence 55555554 6689999999999999999999999999999887 55667889999999999999 67899999999999
Q ss_pred EEEcCCCCcceeEee-cccccEEEEEECC--CCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-CceeEEEccCCe--E
Q psy9936 157 TMWSPTVQKPLASLL-CHKAGIQSVAVNH--TGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-PINNLAFSQRGL--L 230 (315)
Q Consensus 157 ~i~d~~~~~~~~~~~-~~~~~i~~~~~sp--~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~g~--~ 230 (315)
++||++++.+...+. +|...+..+.|+| ++.+|++|+.|++|++||++++ .++..+..|. .|..++|+|++. +
T Consensus 166 ~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~-~~~~~~~~h~~~v~~~~~~p~~~~l~ 244 (304)
T 2ynn_A 166 KVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK-SCVATLEGHMSNVSFAVFHPTLPIII 244 (304)
T ss_dssp EEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTT-EEEEEEECCSSCEEEEEECSSSSEEE
T ss_pred EEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCC-ccceeeCCCCCCEEEEEECCCCCEEE
Confidence 999999887766665 4668899999987 6789999999999999999998 8899998886 699999999995 3
Q ss_pred EEEcCCEEEecCC----------------Cceeeccccc--ccccCCcch
Q psy9936 231 ATSRGNIVEFLKP----------------PEINFEPRRK--ANKAGGSVQ 262 (315)
Q Consensus 231 ~~~~~~~i~~~~~----------------~~~~~~~~~~--~~~~~~~~~ 262 (315)
.++.|++|++|+. .+++|+|++. ++++|..++
T Consensus 245 s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g 294 (304)
T 2ynn_A 245 SGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG 294 (304)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTE
T ss_pred EEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCc
Confidence 4456999999987 4677788765 466665554
No 4
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4.6e-43 Score=300.10 Aligned_cols=263 Identities=15% Similarity=0.205 Sum_probs=231.4
Q ss_pred EEEeeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCC
Q psy9936 4 QFDLDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQ 80 (315)
Q Consensus 4 ~~~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~ 80 (315)
...+.. ...|++++|+|++++|++|+.||+|++||..+++....+. +...|.+++|+|++.++++++ |+.+++|++.
T Consensus 57 ~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~ 136 (354)
T 2pbi_B 57 RRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLT 136 (354)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECC
T ss_pred EEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEe
Confidence 445666 7899999999999999999999999999999888777766 778899999999999999987 8999999974
Q ss_pred CC--------EEEEeecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcC--CCCEEEEE
Q psy9936 81 GI--------ELHCLKVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNP--YNACICLG 150 (315)
Q Consensus 81 ~~--------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p--~~~~l~~~ 150 (315)
.. ......|...|.+++|+|++..|++++.|++|++||+.+++.+..+.+|...|.+++|+| +|++|++|
T Consensus 137 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sg 216 (354)
T 2pbi_B 137 FDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSG 216 (354)
T ss_dssp CCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEE
T ss_pred ccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEE
Confidence 21 223345778999999999999999999999999999999999999999999999999988 56899999
Q ss_pred cCCCeEEEEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC---CceeEEEccC
Q psy9936 151 HRNGTVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT---PINNLAFSQR 227 (315)
Q Consensus 151 ~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~---~v~~~~~s~~ 227 (315)
+.|+.|++||+++++++..+.+|...|++++|+|++.+|++|+.|++|++||++.. ..+..+..+. ++.+++|+|+
T Consensus 217 s~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~-~~~~~~~~~~~~~~~~~~~~s~~ 295 (354)
T 2pbi_B 217 GCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRAD-REVAIYSKESIIFGASSVDFSLS 295 (354)
T ss_dssp ETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-EEEEEECCTTCCSCEEEEEECTT
T ss_pred eCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCC-cEEEEEcCCCcccceeEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999987 6666665433 5889999999
Q ss_pred CeEE--EEcCCEEEecCC----------------CceeecccccccccCCcchhhhhh
Q psy9936 228 GLLA--TSRGNIVEFLKP----------------PEINFEPRRKANKAGGSVQRAKVK 267 (315)
Q Consensus 228 g~~~--~~~~~~i~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~ 267 (315)
|.++ ++.|+.|++|+. .+++|+|+++++++++.++.++.+
T Consensus 296 g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW 353 (354)
T 2pbi_B 296 GRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 353 (354)
T ss_dssp SSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred CCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEec
Confidence 9544 345899999976 578999999999999999876543
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.8e-43 Score=297.43 Aligned_cols=257 Identities=16% Similarity=0.239 Sum_probs=227.3
Q ss_pred CCcEEEEEEcCC----CCEEEEEcCCCeEEEEEccCceEE--EEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCCC
Q psy9936 10 QFGIYRMNYTKN----GRHLLLGGKRGHVAAFDWVRKTLA--CEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQG 81 (315)
Q Consensus 10 ~~~v~~~~~s~~----~~~l~~~~~dg~i~v~~~~~~~~~--~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~ 81 (315)
.++|.+++|+|+ +.+|++|+.|++|+||++.+++.. ..+. |...|.+++|+|++.++++++ |+.|++||+..
T Consensus 32 ~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~ 111 (321)
T 3ow8_A 32 DDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLEN 111 (321)
T ss_dssp SSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred CCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 789999999985 569999999999999999877643 3444 888999999999999998887 89999999954
Q ss_pred -CEEEEee-cCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCeEEEE
Q psy9936 82 -IELHCLK-VLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNGTVTMW 159 (315)
Q Consensus 82 -~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~ 159 (315)
..+..+. +...+.+++|+|++++|++++.++.|++||+.+++....+..|...+.+++|+|+|++|++|+.|+.|++|
T Consensus 112 ~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iw 191 (321)
T 3ow8_A 112 GKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 191 (321)
T ss_dssp TEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred CCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEE
Confidence 4444444 44778999999999999999999999999999999998898899999999999999999999999999999
Q ss_pred cCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-CceeEEEccCCe--EEEEcCC
Q psy9936 160 SPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-PINNLAFSQRGL--LATSRGN 236 (315)
Q Consensus 160 d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~g~--~~~~~~~ 236 (315)
|+++++.+..+.+|..+|.+++|+|++++|++|+.|+.|++||++++ .++..+..|. .|.+++|+|++. +.++.|+
T Consensus 192 d~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~-~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~ 270 (321)
T 3ow8_A 192 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA-NLAGTLSGHASWVLNVAFCPDDTHFVSSSSDK 270 (321)
T ss_dssp ETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC-CEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred ECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCc-ceeEEEcCCCCceEEEEECCCCCEEEEEeCCC
Confidence 99999999999999999999999999999999999999999999998 8888888776 599999999995 3445699
Q ss_pred EEEecCC----------------CceeecccccccccCCcchhhhhh
Q psy9936 237 IVEFLKP----------------PEINFEPRRKANKAGGSVQRAKVK 267 (315)
Q Consensus 237 ~i~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~ 267 (315)
+|++|++ ..++|+|++..+++++.++.++.+
T Consensus 271 ~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vw 317 (321)
T 3ow8_A 271 SVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 317 (321)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEE
T ss_pred cEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 9999987 578999999999999998877654
No 6
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.1e-42 Score=291.81 Aligned_cols=262 Identities=13% Similarity=0.154 Sum_probs=227.6
Q ss_pred EEeeC-CCcEEEEEEcCCC-CEEEEEcCCCeEEEEEccC-----ceEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEE
Q psy9936 5 FDLDL-QFGIYRMNYTKNG-RHLLLGGKRGHVAAFDWVR-----KTLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVY 75 (315)
Q Consensus 5 ~~~~~-~~~v~~~~~s~~~-~~l~~~~~dg~i~v~~~~~-----~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~ 75 (315)
..+.. .++|.+++|+|++ ++|++++.|++|++|++.+ +..+..+. |...|.+++|+|++.+|++++ |++|+
T Consensus 11 ~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~ 90 (319)
T 3frx_A 11 GTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLR 90 (319)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEE
Confidence 34556 7899999999965 7999999999999999864 23445555 889999999999999998887 89999
Q ss_pred EEeCCC-CEEEEe-ecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCC------CCEE
Q psy9936 76 IYDNQG-IELHCL-KVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPY------NACI 147 (315)
Q Consensus 76 i~~~~~-~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~------~~~l 147 (315)
+||+.. ..+..+ .|...|.+++|+|++.+|++++.|++|++||++ +..+..+.+|...+.++.|+|. +..|
T Consensus 91 ~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l 169 (319)
T 3frx_A 91 LWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTI 169 (319)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCEE
T ss_pred EEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEE
Confidence 999954 444444 466899999999999999999999999999997 5677788899999999999995 4489
Q ss_pred EEEcCCCeEEEEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCCCceeEEEccC
Q psy9936 148 CLGHRNGTVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRTPINNLAFSQR 227 (315)
Q Consensus 148 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~ 227 (315)
++++.|+.|++||+++.+....+.+|...|++++|+|+|++|++|+.|+.|++||+.++ +++..+..+.++.+++|+|+
T Consensus 170 ~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~v~~~~~sp~ 248 (319)
T 3frx_A 170 ISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAK-KAMYTLSAQDEVFSLAFSPN 248 (319)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTT-EEEEEEECCSCEEEEEECSS
T ss_pred EEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-cEEEEecCCCcEEEEEEcCC
Confidence 99999999999999999888899999999999999999999999999999999999998 88888888889999999999
Q ss_pred Ce-EEEEcCCEEEecCC------------------------CceeecccccccccCCcchhhhhhh
Q psy9936 228 GL-LATSRGNIVEFLKP------------------------PEINFEPRRKANKAGGSVQRAKVKK 268 (315)
Q Consensus 228 g~-~~~~~~~~i~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (315)
+. ++++.++.+++|+. .+++|+|+|+++++|+.++.++.+.
T Consensus 249 ~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd 314 (319)
T 3frx_A 249 RYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQ 314 (319)
T ss_dssp SSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEE
Confidence 96 44556777877643 3689999999999999999877654
No 7
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=6.6e-43 Score=299.39 Aligned_cols=263 Identities=14% Similarity=0.197 Sum_probs=220.2
Q ss_pred CCcEEEEEEcCCCCEEEEEcC------CCeEEEEEccCceEE-----EEecCCCceeEEEEeecCcEEEEEeCCeEEEEe
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGK------RGHVAAFDWVRKTLA-----CEMNVMEEVYDIKWLHLETMFAVAQKDWVYIYD 78 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~------dg~i~v~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~~ 78 (315)
+..|++++|||||++||+++. |+.|++|+..++... ....|...|.+++|+|++.+++++.|+.|++||
T Consensus 42 ~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd 121 (357)
T 4g56_B 42 EVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVASDSGAVELWE 121 (357)
T ss_dssp CSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEETTSCEEEC-
T ss_pred cCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEECCCEEEEee
Confidence 567999999999999999987 788999998776532 334578889999999999999888899999999
Q ss_pred CCCCE------EEEeecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCC-EEEEEc
Q psy9936 79 NQGIE------LHCLKVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNA-CICLGH 151 (315)
Q Consensus 79 ~~~~~------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~-~l~~~~ 151 (315)
+.... .....|...|.+++|+|++++|++++.|+.|++||+.+++.+..+.+|...|++++|+|++. ++++++
T Consensus 122 ~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~ 201 (357)
T 4g56_B 122 ILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCG 201 (357)
T ss_dssp -------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEE
T ss_pred ccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeec
Confidence 85432 12234678999999999999999999999999999999999999999999999999999885 789999
Q ss_pred CCCeEEEEcCCCCcceeEee--cccccEEEEEECCC-CCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-CceeEEEccC
Q psy9936 152 RNGTVTMWSPTVQKPLASLL--CHKAGIQSVAVNHT-GTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-PINNLAFSQR 227 (315)
Q Consensus 152 ~d~~i~i~d~~~~~~~~~~~--~~~~~i~~~~~sp~-g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~ 227 (315)
.|+.|++||+++++++..+. .|...+.+++|+|+ +.+|++|+.|+.|++||++++ +++..+..+. +|++++|+|+
T Consensus 202 ~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~-~~~~~~~~~~~~v~~l~~sp~ 280 (357)
T 4g56_B 202 EDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNP-DSAQTSAVHSQNITGLAYSYH 280 (357)
T ss_dssp TTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCG-GGCEEECCCSSCEEEEEECSS
T ss_pred cCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCC-cEeEEEeccceeEEEEEEcCC
Confidence 99999999999988776554 46778999999998 568999999999999999998 8888888776 6999999999
Q ss_pred C-eEE--EEcCCEEEecCC---------------Cceeecc-cccccccCCcchhhhhhhhhHHH
Q psy9936 228 G-LLA--TSRGNIVEFLKP---------------PEINFEP-RRKANKAGGSVQRAKVKKIVRET 273 (315)
Q Consensus 228 g-~~~--~~~~~~i~~~~~---------------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 273 (315)
+ .++ ++.|++|++|+. ++++|+| ++.++++++.|+.++.+....+.
T Consensus 281 ~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 281 SSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp SSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC---
T ss_pred CCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence 7 333 446899999987 5789998 78999999999998888755443
No 8
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.4e-42 Score=288.34 Aligned_cols=237 Identities=14% Similarity=0.227 Sum_probs=215.0
Q ss_pred EeeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCC-C
Q psy9936 6 DLDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQ-G 81 (315)
Q Consensus 6 ~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~-~ 81 (315)
.+.. ..+|.+++|+|++.++++++.|+.|++||+.+++.+..+. +...+.+++|+|++++|++++ ++.|++|++. +
T Consensus 75 ~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~ 154 (321)
T 3ow8_A 75 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG 154 (321)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTC
T ss_pred eeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCC
Confidence 4555 7889999999999999999999999999999999888876 677899999999999999987 8999999995 4
Q ss_pred CEEEEee-cCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCeEEEEc
Q psy9936 82 IELHCLK-VLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNGTVTMWS 160 (315)
Q Consensus 82 ~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d 160 (315)
.....+. +...+.+++|+|++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++|+.|+.|++||
T Consensus 155 ~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd 234 (321)
T 3ow8_A 155 KKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYD 234 (321)
T ss_dssp SEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEE
T ss_pred ceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEE
Confidence 4444443 457899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-CceeEEEccCCe--EEEEcCCE
Q psy9936 161 PTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-PINNLAFSQRGL--LATSRGNI 237 (315)
Q Consensus 161 ~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~g~--~~~~~~~~ 237 (315)
+++++.+..+.+|...|.+++|+|++.+|++++.|++|++||+.++ .++..+..|. .|.+++|+|+|. +.++.|+.
T Consensus 235 ~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~-~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~ 313 (321)
T 3ow8_A 235 VQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR-TCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQE 313 (321)
T ss_dssp TTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-EEEEEECCCSSCEEEEEECTTSSEEEEEETTCC
T ss_pred CCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC-EEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCe
Confidence 9999999999999999999999999999999999999999999998 8888887776 699999999994 34456899
Q ss_pred EEecCC
Q psy9936 238 VEFLKP 243 (315)
Q Consensus 238 i~~~~~ 243 (315)
|++|+.
T Consensus 314 i~vwd~ 319 (321)
T 3ow8_A 314 IHIYDC 319 (321)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 999984
No 9
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.1e-42 Score=300.52 Aligned_cols=262 Identities=15% Similarity=0.194 Sum_probs=227.1
Q ss_pred EeeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCCCC
Q psy9936 6 DLDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGI 82 (315)
Q Consensus 6 ~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~ 82 (315)
.+.. .+.|++++|+|++++|++|+.||+|+|||+.+++....+. |...|.+++|+|++++|++++ |+.+++|++...
T Consensus 61 ~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~ 140 (380)
T 3iz6_a 61 TLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQ 140 (380)
T ss_dssp EECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCC
T ss_pred cccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCC
Confidence 4555 7899999999999999999999999999999999888877 888999999999999999887 899999998431
Q ss_pred E--------E-EEeecCCceEEEEEcCC-CceEEEEcCCCeEEEEEccCCeEEEEe-----ccCCCCeEEEEEcC-CCCE
Q psy9936 83 E--------L-HCLKVLNKVTRMEFLPY-HFLLATASEEGYLSWLDTSIGKIVSDF-----SAKKGKLSVMTQNP-YNAC 146 (315)
Q Consensus 83 ~--------~-~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~-----~~~~~~v~~~~~~p-~~~~ 146 (315)
. . ....|...+.++.|+|+ +..|++++.|++|++||+.+++.+..+ .+|...|.+++|+| ++++
T Consensus 141 ~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 220 (380)
T 3iz6_a 141 ADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANM 220 (380)
T ss_dssp SSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCE
T ss_pred ccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCE
Confidence 1 1 12346678999999997 457999999999999999999988777 57888999999987 8899
Q ss_pred EEEEcCCCeEEEEcCC-CCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC--------
Q psy9936 147 ICLGHRNGTVTMWSPT-VQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-------- 217 (315)
Q Consensus 147 l~~~~~d~~i~i~d~~-~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-------- 217 (315)
|++|+.|+.|++||++ ..+.+..+.+|...|++++|+|+|.+|++|+.|++|++||++++ .++..+..+.
T Consensus 221 l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~-~~~~~~~~~~~~~~~~~~ 299 (380)
T 3iz6_a 221 FISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTG-HQLQVYNREPDRNDNELP 299 (380)
T ss_dssp EEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTT-EEEEEECCCCSSSCCSSC
T ss_pred EEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCC-cEEEEecccccccccccC
Confidence 9999999999999998 45788889999999999999999999999999999999999998 7777665432
Q ss_pred CceeEEEccCCeEEE--EcCCEEEecCC--------------------CceeecccccccccCCcchhhhhhh
Q psy9936 218 PINNLAFSQRGLLAT--SRGNIVEFLKP--------------------PEINFEPRRKANKAGGSVQRAKVKK 268 (315)
Q Consensus 218 ~v~~~~~s~~g~~~~--~~~~~i~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (315)
.+++++|+|+|.+++ +.|+.|++|+. .+++|+|++.++++|+.++.++.+.
T Consensus 300 ~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~ 372 (380)
T 3iz6_a 300 IVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWA 372 (380)
T ss_dssp SCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred ceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEe
Confidence 378999999996443 35899999974 5789999999999999999887764
No 10
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.5e-42 Score=293.04 Aligned_cols=258 Identities=11% Similarity=0.144 Sum_probs=213.1
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccC------------ceEEEEecCCCceeEEEEeecCcEEEEEeCCeEEEE
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVR------------KTLACEMNVMEEVYDIKWLHLETMFAVAQKDWVYIY 77 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~ 77 (315)
+..|.+++|+|||++|++++ |+++++||... +.....+.+...|.+++|+|++.+++++.||.|++|
T Consensus 30 ~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~l~~~s~dg~v~lW 108 (344)
T 4gqb_B 30 ERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGERGILVASDSGAVELW 108 (344)
T ss_dssp CSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTTEEEEEETTSEEEEE
T ss_pred cCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCCeEEEEECCCEEEEE
Confidence 45689999999999999877 66777776321 112333446678999999999887777779999999
Q ss_pred eCCC-CEEEE-----eecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCC-EEEEE
Q psy9936 78 DNQG-IELHC-----LKVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNA-CICLG 150 (315)
Q Consensus 78 ~~~~-~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~-~l~~~ 150 (315)
|+.. +.+.. ..|...|.+++|+|++++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++. +|+++
T Consensus 109 d~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~ 188 (344)
T 4gqb_B 109 ELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSC 188 (344)
T ss_dssp EECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEE
T ss_pred eccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeee
Confidence 9853 32221 24678999999999999999999999999999999999999999999999999999985 78999
Q ss_pred cCCCeEEEEcCCCCcceeEee--cccccEEEEEECCC-CCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-CceeEEEcc
Q psy9936 151 HRNGTVTMWSPTVQKPLASLL--CHKAGIQSVAVNHT-GTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-PINNLAFSQ 226 (315)
Q Consensus 151 ~~d~~i~i~d~~~~~~~~~~~--~~~~~i~~~~~sp~-g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~s~ 226 (315)
+.|++|++||+++++++..+. .|...+.+++|+|+ +++|++|+.|+.|++||++++ +++..+..|. .|++++|+|
T Consensus 189 s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~-~~~~~~~~h~~~v~~v~fsp 267 (344)
T 4gqb_B 189 SEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKST-SCVLSSAVHSQCVTGLVFSP 267 (344)
T ss_dssp ETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC---CCEEEECCSSCEEEEEECS
T ss_pred ccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCC-cEEEEEcCCCCCEEEEEEcc
Confidence 999999999999999888774 45567999999995 678999999999999999998 8999998876 699999999
Q ss_pred CC-eEE--EEcCCEEEecCC---------------Cceeecccccc-cccCCcchhhhhhhh
Q psy9936 227 RG-LLA--TSRGNIVEFLKP---------------PEINFEPRRKA-NKAGGSVQRAKVKKI 269 (315)
Q Consensus 227 ~g-~~~--~~~~~~i~~~~~---------------~~~~~~~~~~~-~~~~~~~~~~~~~~~ 269 (315)
+| .++ ++.|++|++|+. .+++|+|++.. +++++.|+.++.+..
T Consensus 268 ~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v 329 (344)
T 4gqb_B 268 HSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVV 329 (344)
T ss_dssp SSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred CCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEEC
Confidence 98 333 456999999987 67899999875 668888988877654
No 11
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=8.4e-42 Score=291.29 Aligned_cols=266 Identities=15% Similarity=0.195 Sum_probs=220.0
Q ss_pred EEeeC-CC-cEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEE--Ee--cCCCceeEEEEeecCcEEEEEe-CCeEEEE
Q psy9936 5 FDLDL-QF-GIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLAC--EM--NVMEEVYDIKWLHLETMFAVAQ-KDWVYIY 77 (315)
Q Consensus 5 ~~~~~-~~-~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~--~~--~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~ 77 (315)
..+.. .. .|.+++|+|+|++||+|+.|+.|+|||+.++.... .+ .|...|.+++|+|++++|++++ |+.+++|
T Consensus 9 ~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw 88 (345)
T 3fm0_A 9 GRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIW 88 (345)
T ss_dssp EEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEE
Confidence 34444 34 89999999999999999999999999998876432 22 3888999999999999999887 8999999
Q ss_pred eCCCCE---EEEe-ecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCC---eEEEEeccCCCCeEEEEEcCCCCEEEEE
Q psy9936 78 DNQGIE---LHCL-KVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIG---KIVSDFSAKKGKLSVMTQNPYNACICLG 150 (315)
Q Consensus 78 ~~~~~~---~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~---~~~~~~~~~~~~v~~~~~~p~~~~l~~~ 150 (315)
+..... +..+ .|...|.+++|+|++++|++++.|++|++||+.++ ..+..+..|...|.+++|+|++++|+++
T Consensus 89 ~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~ 168 (345)
T 3fm0_A 89 KKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASA 168 (345)
T ss_dssp EECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEE
T ss_pred EccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEE
Confidence 986543 2333 46689999999999999999999999999999876 3456778899999999999999999999
Q ss_pred cCCCeEEEEcCCCCc--ceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCC--------------CeeEec
Q psy9936 151 HRNGTVTMWSPTVQK--PLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEG--------------PLNTFR 214 (315)
Q Consensus 151 ~~d~~i~i~d~~~~~--~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~--------------~~~~~~ 214 (315)
+.|+.|++||+++++ +...+.+|...|++++|+|+|++|++++.|++|++||...... ++..+.
T Consensus 169 s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (345)
T 3fm0_A 169 SYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLS 248 (345)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEEC
T ss_pred eCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEec
Confidence 999999999998774 4567889999999999999999999999999999999754311 122233
Q ss_pred c-CC-CceeEEEccCCe--EEEEcCCEEEecCC-------------------------Cceeecccc-cccccCCcchhh
Q psy9936 215 T-RT-PINNLAFSQRGL--LATSRGNIVEFLKP-------------------------PEINFEPRR-KANKAGGSVQRA 264 (315)
Q Consensus 215 ~-~~-~v~~~~~s~~g~--~~~~~~~~i~~~~~-------------------------~~~~~~~~~-~~~~~~~~~~~~ 264 (315)
. |. .|.+++|+|++. +.++.|+.|++|+. .+++|+|++ .++++++.|+.+
T Consensus 249 ~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v 328 (345)
T 3fm0_A 249 GFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEV 328 (345)
T ss_dssp SSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCE
T ss_pred CCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcE
Confidence 2 33 699999999984 45567999998842 468899998 489999999988
Q ss_pred hhhhhh
Q psy9936 265 KVKKIV 270 (315)
Q Consensus 265 ~~~~~~ 270 (315)
+.++..
T Consensus 329 ~~W~~~ 334 (345)
T 3fm0_A 329 AFWKYQ 334 (345)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 887654
No 12
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.4e-40 Score=290.25 Aligned_cols=237 Identities=15% Similarity=0.227 Sum_probs=214.8
Q ss_pred EeeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCC-C
Q psy9936 6 DLDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQ-G 81 (315)
Q Consensus 6 ~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~-~ 81 (315)
.+.. ...|.+++|+|++++|++|+.|++|++||+.+++.+..+. |...|.+++|+|++.+|++++ |+.|++||+. +
T Consensus 145 ~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~ 224 (410)
T 1vyh_C 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTG 224 (410)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC
T ss_pred EEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence 3455 6789999999999999999999999999999999888877 888999999999999888876 8999999994 5
Q ss_pred CEEEEee-cCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCC-----------------
Q psy9936 82 IELHCLK-VLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPY----------------- 143 (315)
Q Consensus 82 ~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~----------------- 143 (315)
..+..+. |...|.++.|+|++.+|++++.|+.|++||+.+++....+..|...|.+++|+|+
T Consensus 225 ~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (410)
T 1vyh_C 225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKS 304 (410)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC----
T ss_pred cEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhcccccccc
Confidence 5555554 5688999999999999999999999999999999999999999999999999996
Q ss_pred ---CCEEEEEcCCCeEEEEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-Cc
Q psy9936 144 ---NACICLGHRNGTVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-PI 219 (315)
Q Consensus 144 ---~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v 219 (315)
|.+|++|+.|+.|++||+++++++..+.+|...|++++|+|+|++|++|+.|+.|++||+.++ +++..+..|. .|
T Consensus 305 ~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~-~~~~~~~~h~~~v 383 (410)
T 1vyh_C 305 GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK-RCMKTLNAHEHFV 383 (410)
T ss_dssp ---CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTS-CCCEEEECCSSCE
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-ceEEEEcCCCCcE
Confidence 678999999999999999999999999999999999999999999999999999999999998 8888888876 69
Q ss_pred eeEEEccCCe--EEEEcCCEEEecCC
Q psy9936 220 NNLAFSQRGL--LATSRGNIVEFLKP 243 (315)
Q Consensus 220 ~~~~~s~~g~--~~~~~~~~i~~~~~ 243 (315)
++++|+|++. +.++.|++|++|+.
T Consensus 384 ~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 384 TSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp EEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred EEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 9999999994 44556999999974
No 13
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3e-40 Score=281.48 Aligned_cols=263 Identities=15% Similarity=0.181 Sum_probs=219.8
Q ss_pred EEEeeC-CCcEEEEEE-----cC-CCCEEEEEcCCCeEEEEEccCc-------eEEEEec-CCCceeEEEEeecCcEEEE
Q psy9936 4 QFDLDL-QFGIYRMNY-----TK-NGRHLLLGGKRGHVAAFDWVRK-------TLACEMN-VMEEVYDIKWLHLETMFAV 68 (315)
Q Consensus 4 ~~~~~~-~~~v~~~~~-----s~-~~~~l~~~~~dg~i~v~~~~~~-------~~~~~~~-~~~~v~~~~~~~~~~~l~~ 68 (315)
...+.. ...|++++| ++ ++++|++|+.|++|++||+.+. .....+. |...|.+++|+|++.++++
T Consensus 14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s 93 (343)
T 2xzm_R 14 RGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAIS 93 (343)
T ss_dssp EEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEE
T ss_pred eeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEE
Confidence 344566 789999999 77 9999999999999999998643 3445555 8899999999999999988
Q ss_pred Ee-CCeEEEEeCC-CCEEEEe-ecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEec---cCCCCeEEEEEcC
Q psy9936 69 AQ-KDWVYIYDNQ-GIELHCL-KVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFS---AKKGKLSVMTQNP 142 (315)
Q Consensus 69 ~~-~~~i~i~~~~-~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~---~~~~~v~~~~~~p 142 (315)
++ |+.|++||+. +..+..+ .|...|.+++|+|++.+|++++.|+.|++||+... ...... .|...+.+++|+|
T Consensus 94 ~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~~~~~~~ 172 (343)
T 2xzm_R 94 SSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE-CKFSSAEKENHSDWVSCVRYSP 172 (343)
T ss_dssp EETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC-EEEECCTTTSCSSCEEEEEECC
T ss_pred EcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC-ceeeeecccCCCceeeeeeecc
Confidence 87 8999999995 4555554 46689999999999999999999999999999843 333333 6888999999999
Q ss_pred CC----------CEEEEEcCCCeEEEEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeE
Q psy9936 143 YN----------ACICLGHRNGTVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNT 212 (315)
Q Consensus 143 ~~----------~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~ 212 (315)
++ .+|++++.|+.|++||. ..+....+.+|...|.+++|+|+|++|++|+.|+.|++||+.....+...
T Consensus 173 ~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~ 251 (343)
T 2xzm_R 173 IMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQRE 251 (343)
T ss_dssp CCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEE
T ss_pred ccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCccccee
Confidence 87 78999999999999994 45667788899999999999999999999999999999999554256666
Q ss_pred eccCCCceeEEEccCCeE-EEEcCCEEEecCC-----------------------------CceeecccccccccCCcch
Q psy9936 213 FRTRTPINNLAFSQRGLL-ATSRGNIVEFLKP-----------------------------PEINFEPRRKANKAGGSVQ 262 (315)
Q Consensus 213 ~~~~~~v~~~~~s~~g~~-~~~~~~~i~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~ 262 (315)
+.....|.+++|+|++.+ +++.|+.+++|+. .+++|+|+++++++|+.++
T Consensus 252 ~~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg 331 (343)
T 2xzm_R 252 FDAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDG 331 (343)
T ss_dssp EECSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTS
T ss_pred ecCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCc
Confidence 655667999999999964 4556888998864 2478999999999999998
Q ss_pred hhhhhh
Q psy9936 263 RAKVKK 268 (315)
Q Consensus 263 ~~~~~~ 268 (315)
.++.+.
T Consensus 332 ~v~~w~ 337 (343)
T 2xzm_R 332 VIRTFS 337 (343)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 776654
No 14
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=9.8e-40 Score=274.51 Aligned_cols=263 Identities=18% Similarity=0.246 Sum_probs=224.9
Q ss_pred EEEeeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCC
Q psy9936 4 QFDLDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQ 80 (315)
Q Consensus 4 ~~~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~ 80 (315)
.+.+.. ..+|.+++|+|++++|++++.||.|++|++.+++....+. |...|.+++|+|++++|++++ |+.|++||+.
T Consensus 16 ~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~ 95 (312)
T 4ery_A 16 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVS 95 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECC
Confidence 345555 7899999999999999999999999999999998888777 888999999999999998886 8999999995
Q ss_pred -CCEEEEee-cCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCeEEE
Q psy9936 81 -GIELHCLK-VLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNGTVTM 158 (315)
Q Consensus 81 -~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i 158 (315)
+..+..+. |...|.+++|+|++++|++++.|+.|++||+++++.+..+..|...+.+++|+|++++|++++.|+.|++
T Consensus 96 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 175 (312)
T 4ery_A 96 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 175 (312)
T ss_dssp TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Confidence 44555554 5688999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCcceeEee-cccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCCC---ceeEEEc-cCCeEEE-
Q psy9936 159 WSPTVQKPLASLL-CHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRTP---INNLAFS-QRGLLAT- 232 (315)
Q Consensus 159 ~d~~~~~~~~~~~-~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~---v~~~~~s-~~g~~~~- 232 (315)
||+++++.+..+. .+..++..++|+|++++|++++.|+.|++||++++ +++..+..|.. .....++ +++.+++
T Consensus 176 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 254 (312)
T 4ery_A 176 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG-KCLKTYTGHKNEKYCIFANFSVTGGKWIVS 254 (312)
T ss_dssp EETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTT-EEEEEECSSCCSSSCCCEEEECSSSCEEEE
T ss_pred EECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC-cEEEEEEecCCceEEEEEEEEeCCCcEEEE
Confidence 9999998877764 45678999999999999999999999999999998 88888876652 2333444 4564433
Q ss_pred -EcCCEEEecCC----------------CceeecccccccccCC--cchhhhhh
Q psy9936 233 -SRGNIVEFLKP----------------PEINFEPRRKANKAGG--SVQRAKVK 267 (315)
Q Consensus 233 -~~~~~i~~~~~----------------~~~~~~~~~~~~~~~~--~~~~~~~~ 267 (315)
+.|+.|++|+. ..++|+|++..+++++ .++.++.+
T Consensus 255 g~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W 308 (312)
T 4ery_A 255 GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 308 (312)
T ss_dssp CCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEE
T ss_pred ECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEe
Confidence 45899999987 5688999999998876 45555544
No 15
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.2e-40 Score=281.97 Aligned_cols=231 Identities=15% Similarity=0.161 Sum_probs=194.9
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEe-----cCCCceeEEEEeecCcEEEEEe-CCeEEEEeCCC-C
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEM-----NVMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQG-I 82 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~-~ 82 (315)
+.+|.+++|+|++ .|++++.||.|+|||+.+++....+ .|...|++++|+|++++|++++ |+.|++||+.. .
T Consensus 82 ~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~ 160 (344)
T 4gqb_B 82 EAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQV 160 (344)
T ss_dssp SSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred CCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc
Confidence 5689999999985 7889999999999999988654322 3889999999999999999887 89999999954 4
Q ss_pred EEEEee-cCCceEEEEEcCCCc-eEEEEcCCCeEEEEEccCCeEEEEec--cCCCCeEEEEEcCC-CCEEEEEcCCCeEE
Q psy9936 83 ELHCLK-VLNKVTRMEFLPYHF-LLATASEEGYLSWLDTSIGKIVSDFS--AKKGKLSVMTQNPY-NACICLGHRNGTVT 157 (315)
Q Consensus 83 ~~~~~~-~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~--~~~~~v~~~~~~p~-~~~l~~~~~d~~i~ 157 (315)
.+..+. |...|.+++|+|++. +|++++.|++|++||+++++....+. .+...+.+++|+|+ +++|++|+.|+.|+
T Consensus 161 ~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~ 240 (344)
T 4gqb_B 161 VLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVS 240 (344)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred EEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEE
Confidence 444544 668999999999974 78999999999999999998887764 35567899999995 56889999999999
Q ss_pred EEcCCCCcceeEeecccccEEEEEECCCC-CEEEEeeCCCcEEEEEccCCCCCeeEeccCC-CceeEEEccCCe-EE--E
Q psy9936 158 MWSPTVQKPLASLLCHKAGIQSVAVNHTG-TYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-PINNLAFSQRGL-LA--T 232 (315)
Q Consensus 158 i~d~~~~~~~~~~~~~~~~i~~~~~sp~g-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~g~-~~--~ 232 (315)
+||+++++++..+.+|...|++++|+|++ ++|++|+.|++|+|||+.++ +++ .+..|. .|++++|+|++. ++ +
T Consensus 241 ~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~-~~~-~~~~H~~~V~~v~~sp~~~~llas~ 318 (344)
T 4gqb_B 241 LVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS-ELF-RSQAHRDFVRDATWSPLNHSLLTTV 318 (344)
T ss_dssp EEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC-EEE-EECCCSSCEEEEEECSSSTTEEEEE
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC-cEE-EEcCCCCCEEEEEEeCCCCeEEEEE
Confidence 99999999999999999999999999998 58999999999999999987 554 455565 699999999983 44 3
Q ss_pred EcCCEEEecCC
Q psy9936 233 SRGNIVEFLKP 243 (315)
Q Consensus 233 ~~~~~i~~~~~ 243 (315)
+.|++|++|+.
T Consensus 319 s~D~~v~~w~v 329 (344)
T 4gqb_B 319 GWDHQVVHHVV 329 (344)
T ss_dssp ETTSCEEEEEC
T ss_pred cCCCeEEEEEC
Confidence 46999999986
No 16
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.4e-40 Score=278.41 Aligned_cols=264 Identities=15% Similarity=0.208 Sum_probs=212.3
Q ss_pred cEEEeeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCc--eEEEEe--c-CCCceeEEEEeecCcEEEEEe-CCeEE
Q psy9936 3 KQFDLDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRK--TLACEM--N-VMEEVYDIKWLHLETMFAVAQ-KDWVY 75 (315)
Q Consensus 3 ~~~~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~--~~~~~~--~-~~~~v~~~~~~~~~~~l~~~~-~~~i~ 75 (315)
.+..+.. ..+|.+++|+|+ +|++++.|+.|++|++.++ .....+ . |...|.+++|+|++.+|++++ |+.|+
T Consensus 6 ~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~ 83 (330)
T 2hes_X 6 LIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVS 83 (330)
T ss_dssp EEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred cceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEE
Confidence 3455666 789999999997 9999999999999999875 444444 3 788999999999999999887 89999
Q ss_pred EEeCCC--------CEEEEe-ecCCceEEEEEcCCCceEEEEcCCCeEEEEEccC----CeEEEEeccCCCCeEEEEEcC
Q psy9936 76 IYDNQG--------IELHCL-KVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSI----GKIVSDFSAKKGKLSVMTQNP 142 (315)
Q Consensus 76 i~~~~~--------~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~----~~~~~~~~~~~~~v~~~~~~p 142 (315)
+|++.. ..+..+ .|...|.+++|+|++++|++++.|++|++||+.. .+.+..+.+|...|.+++|+|
T Consensus 84 iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p 163 (330)
T 2hes_X 84 IWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHP 163 (330)
T ss_dssp EEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECS
T ss_pred EEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECC
Confidence 999842 122333 4668999999999999999999999999999943 256777889999999999999
Q ss_pred CCCEEEEEcCCCeEEEEcCCCC--cceeEeecccccEEEEEECCC--CCEEEEeeCCCcEEEEEccCCC-------CCee
Q psy9936 143 YNACICLGHRNGTVTMWSPTVQ--KPLASLLCHKAGIQSVAVNHT--GTYMATSAGDSQLRIWDVRNLE-------GPLN 211 (315)
Q Consensus 143 ~~~~l~~~~~d~~i~i~d~~~~--~~~~~~~~~~~~i~~~~~sp~--g~~l~~~~~d~~i~iwd~~~~~-------~~~~ 211 (315)
++.+|++++.|++|++||.+++ +++..+.+|...|.+++|+|+ +.+|++|+.|++|++||+.... .+..
T Consensus 164 ~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~ 243 (330)
T 2hes_X 164 SEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEA 243 (330)
T ss_dssp SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEee
Confidence 9999999999999999998766 678888999999999999999 7799999999999999997641 1222
Q ss_pred Eecc-CC-CceeEEEccCCeE-EEEcCCEEEecCC--------------------Cceeecc--cccccccCCcchhhhh
Q psy9936 212 TFRT-RT-PINNLAFSQRGLL-ATSRGNIVEFLKP--------------------PEINFEP--RRKANKAGGSVQRAKV 266 (315)
Q Consensus 212 ~~~~-~~-~v~~~~~s~~g~~-~~~~~~~i~~~~~--------------------~~~~~~~--~~~~~~~~~~~~~~~~ 266 (315)
.+.. |. .|.+++|++++.+ .++.|+.|++|+. ..++|+| ++.++++++.++.++.
T Consensus 244 ~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~ 323 (330)
T 2hes_X 244 ILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNF 323 (330)
T ss_dssp ECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEE
T ss_pred ecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEE
Confidence 3332 43 6999999988854 4556999998853 3467888 6889999999988776
Q ss_pred hh
Q psy9936 267 KK 268 (315)
Q Consensus 267 ~~ 268 (315)
+.
T Consensus 324 W~ 325 (330)
T 2hes_X 324 WS 325 (330)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 17
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-39 Score=278.42 Aligned_cols=270 Identities=16% Similarity=0.228 Sum_probs=235.5
Q ss_pred cEEEeeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeC
Q psy9936 3 KQFDLDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDN 79 (315)
Q Consensus 3 ~~~~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~ 79 (315)
+.+.+.. ...|++++|+|++++|++++.||.|++||+.+++....+. |...|.+++|+|++++|++++ |+.|++||+
T Consensus 24 ~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 103 (369)
T 3zwl_B 24 KAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDV 103 (369)
T ss_dssp EEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEET
T ss_pred ccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 4556777 8899999999999999999999999999999999988887 889999999999999988876 899999999
Q ss_pred C-CCEEEEeecCCceEEEEEcCCCceEEEEcCC-----CeEEEEEccCCe-----------EEEEeccCCC--CeEEEEE
Q psy9936 80 Q-GIELHCLKVLNKVTRMEFLPYHFLLATASEE-----GYLSWLDTSIGK-----------IVSDFSAKKG--KLSVMTQ 140 (315)
Q Consensus 80 ~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~-----------~~~~~~~~~~--~v~~~~~ 140 (315)
. +..+..+.+...+.+++|+|++.++++++.+ +.|.+||+..+. ....+..|.. .+.+++|
T Consensus 104 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (369)
T 3zwl_B 104 SNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGW 183 (369)
T ss_dssp TTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEE
T ss_pred CCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEE
Confidence 4 5666667788999999999999999999998 999999997653 3344455655 8999999
Q ss_pred cCCCCEEEEEcCCCeEEEEcCCC-CcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCCCc
Q psy9936 141 NPYNACICLGHRNGTVTMWSPTV-QKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRTPI 219 (315)
Q Consensus 141 ~p~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v 219 (315)
+|++++|++++.||.|++||+++ .+.+..+..|...|.+++|+|++.+|++++.|+.|++||++++ .++..+....++
T Consensus 184 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~-~~~~~~~~~~~~ 262 (369)
T 3zwl_B 184 STKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTL-QVLKKYETDCPL 262 (369)
T ss_dssp CGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-CEEEEEECSSCE
T ss_pred cCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCC-ceeeeecCCCCc
Confidence 99999999999999999999998 7888888899999999999999999999999999999999998 888888877789
Q ss_pred eeEEEccCCeEE--EEcCC--------------EEEecCC----------------CceeecccccccccCCcchhhhhh
Q psy9936 220 NNLAFSQRGLLA--TSRGN--------------IVEFLKP----------------PEINFEPRRKANKAGGSVQRAKVK 267 (315)
Q Consensus 220 ~~~~~s~~g~~~--~~~~~--------------~i~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~ 267 (315)
..++|+|++.++ ++.++ .+++|+. .+++|+|+++++++++.++.++.+
T Consensus 263 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw 342 (369)
T 3zwl_B 263 NTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLH 342 (369)
T ss_dssp EEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred eeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEE
Confidence 999999999543 33455 6777765 568999999999999999988877
Q ss_pred hhhHHH
Q psy9936 268 KIVRET 273 (315)
Q Consensus 268 ~~~~~~ 273 (315)
......
T Consensus 343 ~~~~~~ 348 (369)
T 3zwl_B 343 HFEKSY 348 (369)
T ss_dssp EECHHH
T ss_pred ECcccc
Confidence 655443
No 18
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=4.2e-39 Score=274.08 Aligned_cols=237 Identities=12% Similarity=0.224 Sum_probs=206.3
Q ss_pred EEeeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCce----EEEEec-CCCceeEEEEeecCcEEEEEeCCeEEEEe
Q psy9936 5 FDLDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKT----LACEMN-VMEEVYDIKWLHLETMFAVAQKDWVYIYD 78 (315)
Q Consensus 5 ~~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~----~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~i~i~~ 78 (315)
..+.. ...|.+++|+|++++|++++.|+.|++|++.++. ....+. |...|.++.|++++.+++++.|+.|++||
T Consensus 91 ~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd 170 (340)
T 1got_B 91 HAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWD 170 (340)
T ss_dssp EEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEE
T ss_pred eEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEE
Confidence 34455 6789999999999999999999999999997653 344444 88899999999999877777799999999
Q ss_pred CCC-CEEEEee-cCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCeE
Q psy9936 79 NQG-IELHCLK-VLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNGTV 156 (315)
Q Consensus 79 ~~~-~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i 156 (315)
+.. ..+..+. |...|.+++|+|++.++++++.|+.|++||++++..+..+.+|...|.+++|+|++++|++|+.|+.|
T Consensus 171 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v 250 (340)
T 1got_B 171 IETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATC 250 (340)
T ss_dssp TTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcE
Confidence 954 4444443 66899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCcceeEeec--ccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-CceeEEEccCCe--EE
Q psy9936 157 TMWSPTVQKPLASLLC--HKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-PINNLAFSQRGL--LA 231 (315)
Q Consensus 157 ~i~d~~~~~~~~~~~~--~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~g~--~~ 231 (315)
++||+++++.+..+.. +...|++++|+|+|++|++|+.|+.|++||+.++ ..+..+..|. +|.+++|+|+|. +.
T Consensus 251 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~-~~~~~~~~h~~~v~~~~~s~dg~~l~s 329 (340)
T 1got_B 251 RLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA-DRAGVLAGHDNRVSCLGVTDDGMAVAT 329 (340)
T ss_dssp EEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-CEEEEEECCSSCEEEEEECTTSSCEEE
T ss_pred EEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccC-cEeeEeecCCCcEEEEEEcCCCCEEEE
Confidence 9999999887776652 3357999999999999999999999999999998 8888888876 699999999995 34
Q ss_pred EEcCCEEEecC
Q psy9936 232 TSRGNIVEFLK 242 (315)
Q Consensus 232 ~~~~~~i~~~~ 242 (315)
++.|++|++|+
T Consensus 330 ~s~D~~i~iWd 340 (340)
T 1got_B 330 GSWDSFLKIWN 340 (340)
T ss_dssp EETTSCEEEEC
T ss_pred EcCCccEEecC
Confidence 45699999996
No 19
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=5.1e-39 Score=272.72 Aligned_cols=263 Identities=14% Similarity=0.130 Sum_probs=227.0
Q ss_pred EeeC-CCcEEEEEEcCC-CCEEEEEcCCCeEEEEEccCce-----EEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEE
Q psy9936 6 DLDL-QFGIYRMNYTKN-GRHLLLGGKRGHVAAFDWVRKT-----LACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYI 76 (315)
Q Consensus 6 ~~~~-~~~v~~~~~s~~-~~~l~~~~~dg~i~v~~~~~~~-----~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i 76 (315)
.|++ .+.|++++|+|+ +++|++|+.||+|+|||+.+.+ +...+. |...|.+++|+|++++|++++ |+.|++
T Consensus 33 tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~ 112 (340)
T 4aow_A 33 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRL 112 (340)
T ss_dssp EECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceE
Confidence 4556 789999999997 6899999999999999987543 344555 889999999999999999887 899999
Q ss_pred EeCCCCEEEE--eecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEE-EEeccCCCCeEEEEEcCCC--CEEEEEc
Q psy9936 77 YDNQGIELHC--LKVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIV-SDFSAKKGKLSVMTQNPYN--ACICLGH 151 (315)
Q Consensus 77 ~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~-~~~~~~~~~v~~~~~~p~~--~~l~~~~ 151 (315)
|+........ ..+...+..+.+++++.+|++++.|+.+++||+...... .....|...+..++|++++ .++++++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~ 192 (340)
T 4aow_A 113 WDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCG 192 (340)
T ss_dssp EETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEE
T ss_pred EeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEc
Confidence 9996554433 234477889999999999999999999999999766443 3456788999999999875 4788999
Q ss_pred CCCeEEEEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCCCceeEEEccCCe-E
Q psy9936 152 RNGTVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRTPINNLAFSQRGL-L 230 (315)
Q Consensus 152 ~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~-~ 230 (315)
.|+.|++||+++++.+..+.+|..+|++++|+|++++|++|+.|+.|++||+++. .++..+..+..+..++|+|++. +
T Consensus 193 ~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~-~~~~~~~~~~~v~~~~~~~~~~~~ 271 (340)
T 4aow_A 193 WDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG-KHLYTLDGGDIINALCFSPNRYWL 271 (340)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTT-EEEEEEECSSCEEEEEECSSSSEE
T ss_pred CCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccC-ceeeeecCCceEEeeecCCCCcee
Confidence 9999999999999999999999999999999999999999999999999999998 8888888888999999999996 4
Q ss_pred EEEcCCEEEecCC-------------------------CceeecccccccccCCcchhhhhhhh
Q psy9936 231 ATSRGNIVEFLKP-------------------------PEINFEPRRKANKAGGSVQRAKVKKI 269 (315)
Q Consensus 231 ~~~~~~~i~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (315)
+++.|+.|++|+. ++++|+|+++++++|+.++.++.+..
T Consensus 272 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~ 335 (340)
T 4aow_A 272 CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 335 (340)
T ss_dssp EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeC
Confidence 5567999998865 46889999999999999998877653
No 20
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=7.7e-39 Score=290.73 Aligned_cols=254 Identities=17% Similarity=0.297 Sum_probs=226.1
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEe-CCeEEEEeCCCCEEEEee
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGIELHCLK 88 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~~~~~~~ 88 (315)
...|.+++|+|++++|++++.|+.|++||..+........|...+.+++|+|++++|+++. ++.|++|+.++..+..+.
T Consensus 303 ~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~ 382 (577)
T 2ymu_A 303 SSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLT 382 (577)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEE
T ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEec
Confidence 6789999999999999999999999999987766555455888999999999999999887 789999999887776655
Q ss_pred -cCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCeEEEEcCCCCcce
Q psy9936 89 -VLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNGTVTMWSPTVQKPL 167 (315)
Q Consensus 89 -~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~~ 167 (315)
|...|.+++|+|++++|++++.|+.|++||. +++.+..+..|...|++++|+|++++|++++.|+.|++||. +++.+
T Consensus 383 ~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~ 460 (577)
T 2ymu_A 383 GHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLL 460 (577)
T ss_dssp CCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEE
T ss_pred CCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEE
Confidence 5688999999999999999999999999995 57888889999999999999999999999999999999996 46778
Q ss_pred eEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-CceeEEEccCCeEE--EEcCCEEEecCC-
Q psy9936 168 ASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-PINNLAFSQRGLLA--TSRGNIVEFLKP- 243 (315)
Q Consensus 168 ~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~g~~~--~~~~~~i~~~~~- 243 (315)
..+.+|...|++++|+|++++|++++.|+.|++||. ++ +++..+..|. +|++++|+|+|.++ ++.|+.|++|+.
T Consensus 461 ~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~-~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 461 QTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NG-QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN 538 (577)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TS-CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT
T ss_pred EEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CC-CEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC
Confidence 889999999999999999999999999999999996 44 7888888876 69999999999533 456899999986
Q ss_pred --------------CceeecccccccccCCcchhhhhh
Q psy9936 244 --------------PEINFEPRRKANKAGGSVQRAKVK 267 (315)
Q Consensus 244 --------------~~~~~~~~~~~~~~~~~~~~~~~~ 267 (315)
++++|+||++++++++.|+.++.+
T Consensus 539 ~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~W 576 (577)
T 2ymu_A 539 GQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLW 576 (577)
T ss_dssp SCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEe
Confidence 578999999999999988876543
No 21
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.4e-39 Score=296.11 Aligned_cols=259 Identities=12% Similarity=0.192 Sum_probs=216.1
Q ss_pred CCcEEEEEEcCCCC-EEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeC-CCCEEE
Q psy9936 10 QFGIYRMNYTKNGR-HLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDN-QGIELH 85 (315)
Q Consensus 10 ~~~v~~~~~s~~~~-~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~-~~~~~~ 85 (315)
...|.+++|+|++. .|++++.|++|++||..+++....+. |...|.+++|+|++++|++++ |+.|++||+ ++..+.
T Consensus 147 ~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~ 226 (611)
T 1nr0_A 147 ARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTG 226 (611)
T ss_dssp SSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred CCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEee
Confidence 67899999999987 59999999999999999998888887 889999999999999999887 899999998 455555
Q ss_pred Ee--------ecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEE------------------------------
Q psy9936 86 CL--------KVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSD------------------------------ 127 (315)
Q Consensus 86 ~~--------~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~------------------------------ 127 (315)
.+ .|...|.+++|+|++.+|++++.|++|++||+.+++.+..
T Consensus 227 ~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i 306 (611)
T 1nr0_A 227 VFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFI 306 (611)
T ss_dssp ECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCE
T ss_pred eeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcE
Confidence 55 4678999999999999999999999999999988765433
Q ss_pred -------------eccCCCCeEEEEEcCCCCEEEEEcCCCeEEEEcCCCCcceeEe-e----------------------
Q psy9936 128 -------------FSAKKGKLSVMTQNPYNACICLGHRNGTVTMWSPTVQKPLASL-L---------------------- 171 (315)
Q Consensus 128 -------------~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~---------------------- 171 (315)
+.+|...|.+++|+|+|++|++++.|+.|++||+.+++....+ .
T Consensus 307 ~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~ 386 (611)
T 1nr0_A 307 NFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSW 386 (611)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEET
T ss_pred EEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEc
Confidence 3468889999999999999999999999999998865432211 0
Q ss_pred -----------------------------------------------------------cccccEEEEEECCCCCEEEEe
Q psy9936 172 -----------------------------------------------------------CHKAGIQSVAVNHTGTYMATS 192 (315)
Q Consensus 172 -----------------------------------------------------------~~~~~i~~~~~sp~g~~l~~~ 192 (315)
.|...+.+++|+|+|++||+|
T Consensus 387 d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasg 466 (611)
T 1nr0_A 387 DDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVG 466 (611)
T ss_dssp TTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEE
T ss_pred CCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEe
Confidence 123457789999999999999
Q ss_pred eCCCcEEEEEccCCCCC--eeEeccCCCceeEEEccCCeEEE--EcCCEEEecCC-------------------Cceeec
Q psy9936 193 AGDSQLRIWDVRNLEGP--LNTFRTRTPINNLAFSQRGLLAT--SRGNIVEFLKP-------------------PEINFE 249 (315)
Q Consensus 193 ~~d~~i~iwd~~~~~~~--~~~~~~~~~v~~~~~s~~g~~~~--~~~~~i~~~~~-------------------~~~~~~ 249 (315)
+.|++|++||+.+. .. +........|++++|+|||.+++ +.|++|++|+. .+++|+
T Consensus 467 s~D~~v~lwd~~~~-~~~~~~~~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fs 545 (611)
T 1nr0_A 467 GQDSKVHVYKLSGA-SVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWS 545 (611)
T ss_dssp ETTSEEEEEEEETT-EEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEEC
T ss_pred CCCCeEEEEEccCC-ceeeeeccCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEEC
Confidence 99999999999875 32 23322334799999999996544 45889998854 358899
Q ss_pred ccccccccCCcchhhhhhhh
Q psy9936 250 PRRKANKAGGSVQRAKVKKI 269 (315)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~ 269 (315)
|+++++++++.++.++.+..
T Consensus 546 pdg~~lasgs~D~~v~lW~~ 565 (611)
T 1nr0_A 546 PDNVRLATGSLDNSVIVWNM 565 (611)
T ss_dssp TTSSEEEEEETTSCEEEEET
T ss_pred CCCCEEEEEECCCcEEEEEC
Confidence 99999999999998888764
No 22
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.6e-39 Score=297.25 Aligned_cols=264 Identities=16% Similarity=0.230 Sum_probs=224.6
Q ss_pred EeeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCce--EEEEec-CCCceeEEEEeecCcEEEEEeC-----CeEEE
Q psy9936 6 DLDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKT--LACEMN-VMEEVYDIKWLHLETMFAVAQK-----DWVYI 76 (315)
Q Consensus 6 ~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~--~~~~~~-~~~~v~~~~~~~~~~~l~~~~~-----~~i~i 76 (315)
.+.. ...|++++|+|+|++||+|+.||+|+|||+.+++ ....+. |.++|.+++|+|+++.|+++++ +.|++
T Consensus 54 ~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~ 133 (611)
T 1nr0_A 54 IYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFL 133 (611)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEE
T ss_pred EecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEE
Confidence 3445 6789999999999999999999999999987543 334444 8889999999999999988763 37899
Q ss_pred EeCCCCEEEEeecCCceEEEEEcCCCc-eEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCe
Q psy9936 77 YDNQGIELHCLKVLNKVTRMEFLPYHF-LLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNGT 155 (315)
Q Consensus 77 ~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~ 155 (315)
||..........|...|.+++|+|++. .|++++.|++|++||..+++....+.+|...|.+++|+|+|++|++++.|++
T Consensus 134 wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~ 213 (611)
T 1nr0_A 134 FDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGT 213 (611)
T ss_dssp TTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred eeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCc
Confidence 986332222235668999999999986 5999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCcceeEee-------cccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC----CceeEEE
Q psy9936 156 VTMWSPTVQKPLASLL-------CHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT----PINNLAF 224 (315)
Q Consensus 156 i~i~d~~~~~~~~~~~-------~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~----~v~~~~~ 224 (315)
|++||+.+++.+..+. +|.+.|.+++|+|+|++|++++.|++|++||+.++ +++..+..+. .+..+.|
T Consensus 214 i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~-~~~~~~~~~~~~~~~~~~~~~ 292 (611)
T 1nr0_A 214 IVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATL-KVEKTIPVGTRIEDQQLGIIW 292 (611)
T ss_dssp EEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT-EEEEEEECCSSGGGCEEEEEE
T ss_pred EEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCC-ceeeeecCCCCccceeEEEEE
Confidence 9999999998888774 79999999999999999999999999999999988 7777776543 3566777
Q ss_pred ccCCeEEEEcCCEEEecCC----------------CceeecccccccccCCcchhhhhhhhh
Q psy9936 225 SQRGLLATSRGNIVEFLKP----------------PEINFEPRRKANKAGGSVQRAKVKKIV 270 (315)
Q Consensus 225 s~~g~~~~~~~~~i~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (315)
.....+.++.++.++.|++ .+++|+|+++++++++.++.++.+...
T Consensus 293 ~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~ 354 (611)
T 1nr0_A 293 TKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDIS 354 (611)
T ss_dssp CSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred cCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECC
Confidence 5555677788999999975 468899999999999999988776543
No 23
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=4.4e-39 Score=298.63 Aligned_cols=262 Identities=13% Similarity=0.141 Sum_probs=225.4
Q ss_pred EeeC-CCcEEEEEEcCCC-CEEEEEcCCCeEEEEEccCc-----eEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEE
Q psy9936 6 DLDL-QFGIYRMNYTKNG-RHLLLGGKRGHVAAFDWVRK-----TLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYI 76 (315)
Q Consensus 6 ~~~~-~~~v~~~~~s~~~-~~l~~~~~dg~i~v~~~~~~-----~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i 76 (315)
.+.. .+.|++++|+|++ ++|++|+.|++|++|++.+. .....+. |...|.+++|+|++++|++++ |+.|++
T Consensus 377 ~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~v 456 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRL 456 (694)
T ss_dssp EEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred hcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEE
Confidence 4556 7899999999875 69999999999999998753 3344444 889999999999999999887 899999
Q ss_pred EeCCC-CEEEEe-ecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEe---ccCCCCeEEEEEcCCC--CEEEE
Q psy9936 77 YDNQG-IELHCL-KVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDF---SAKKGKLSVMTQNPYN--ACICL 149 (315)
Q Consensus 77 ~~~~~-~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~---~~~~~~v~~~~~~p~~--~~l~~ 149 (315)
||+.. .....+ .|...|.+++|+|++.+|++++.|++|++||+......... .+|...|.+++|+|++ ..|++
T Consensus 457 wd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s 536 (694)
T 3dm0_A 457 WDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVS 536 (694)
T ss_dssp EETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEE
T ss_pred EECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEE
Confidence 99954 444444 46789999999999999999999999999998755433332 4688889999999987 58999
Q ss_pred EcCCCeEEEEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCCCceeEEEccCCe
Q psy9936 150 GHRNGTVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRTPINNLAFSQRGL 229 (315)
Q Consensus 150 ~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~ 229 (315)
++.|+.|++||+++++....+.+|.+.|++++|+|+|++|++|+.|+.|++||++++ +++..+..+..+.+++|+|++.
T Consensus 537 ~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~-~~~~~~~~~~~v~~~~~sp~~~ 615 (694)
T 3dm0_A 537 ASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEG-KKLYSLEANSVIHALCFSPNRY 615 (694)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTT-EEEECCBCSSCEEEEEECSSSS
T ss_pred EeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC-ceEEEecCCCcEEEEEEcCCCc
Confidence 999999999999999999999999999999999999999999999999999999998 8888887777899999999996
Q ss_pred -EEEEcCCEEEecCC-----------------------------------CceeecccccccccCCcchhhhhhh
Q psy9936 230 -LATSRGNIVEFLKP-----------------------------------PEINFEPRRKANKAGGSVQRAKVKK 268 (315)
Q Consensus 230 -~~~~~~~~i~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (315)
++++.++.|++|+. ++++|+|+++++++|+.++.++.+.
T Consensus 616 ~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~ 690 (694)
T 3dm0_A 616 WLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWG 690 (694)
T ss_dssp EEEEEETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred EEEEEcCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEe
Confidence 45566888999876 2468999999999999999887764
No 24
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.8e-38 Score=266.07 Aligned_cols=237 Identities=11% Similarity=0.135 Sum_probs=206.0
Q ss_pred EEeeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCCC
Q psy9936 5 FDLDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQG 81 (315)
Q Consensus 5 ~~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~ 81 (315)
..+.. ..+|.+++|+|++++|++|+.|+.|++||+.+++.+..+. |...|.+++|+|++.+|++++ |++|++||+..
T Consensus 49 ~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~ 128 (304)
T 2ynn_A 49 RSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWEN 128 (304)
T ss_dssp EEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGG
T ss_pred EEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCC
Confidence 34555 6789999999999999999999999999999999888877 889999999999999998887 89999999854
Q ss_pred C-EE-EEe-ecCCceEEEEEcC-CCceEEEEcCCCeEEEEEccCCeEEEEec-cCCCCeEEEEEcC--CCCEEEEEcCCC
Q psy9936 82 I-EL-HCL-KVLNKVTRMEFLP-YHFLLATASEEGYLSWLDTSIGKIVSDFS-AKKGKLSVMTQNP--YNACICLGHRNG 154 (315)
Q Consensus 82 ~-~~-~~~-~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~~v~~~~~~p--~~~~l~~~~~d~ 154 (315)
. .. ..+ .|...|.+++|+| ++..|++++.|++|++||+.++.....+. .|...+..+.|+| ++.+|++|+.|+
T Consensus 129 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~ 208 (304)
T 2ynn_A 129 NWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDL 208 (304)
T ss_dssp TTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTS
T ss_pred CcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCC
Confidence 3 33 333 4668899999999 57899999999999999998776655544 4667899999987 678999999999
Q ss_pred eEEEEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-CceeEEEccCC---eE
Q psy9936 155 TVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-PINNLAFSQRG---LL 230 (315)
Q Consensus 155 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~g---~~ 230 (315)
.|++||+++++++..+.+|...|.+++|+|++.+|++|+.||+|++||+.++ +++..+..+. .+.+++|+|++ .+
T Consensus 209 ~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (304)
T 2ynn_A 209 TIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY-KVEKTLNVGLERSWCIATHPTGRKNYI 287 (304)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC-CEEEEECCSSSSEEEEEECTTCGGGCE
T ss_pred eEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCC-ceeeeccCCCccEEEEEECCCCCceEE
Confidence 9999999999999999999999999999999999999999999999999998 8888888765 68999999987 25
Q ss_pred EEEcCCEEEecC
Q psy9936 231 ATSRGNIVEFLK 242 (315)
Q Consensus 231 ~~~~~~~i~~~~ 242 (315)
+++.++.+.+|.
T Consensus 288 asg~~~g~~~~~ 299 (304)
T 2ynn_A 288 ASGFDNGFTVLS 299 (304)
T ss_dssp EEEETTEEEEEE
T ss_pred EEecCCceEEEE
Confidence 556677766665
No 25
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=9.2e-39 Score=277.24 Aligned_cols=258 Identities=15% Similarity=0.215 Sum_probs=214.5
Q ss_pred CCCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEecCC-------------------CceeEEEEeecCcEEEEE
Q psy9936 9 LQFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMNVM-------------------EEVYDIKWLHLETMFAVA 69 (315)
Q Consensus 9 ~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~-------------------~~v~~~~~~~~~~~l~~~ 69 (315)
....|.+++|+|||++||+|+ ++.+++|++.+++.+..+... ..|.+++|+|++++|+++
T Consensus 63 h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~ 141 (393)
T 1erj_A 63 HTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATG 141 (393)
T ss_dssp CSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEE
T ss_pred CCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEE
Confidence 478899999999999999986 678999999999887766421 138999999999999988
Q ss_pred e-CCeEEEEeCCCCE-EEEe-ecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcC-CCC
Q psy9936 70 Q-KDWVYIYDNQGIE-LHCL-KVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNP-YNA 145 (315)
Q Consensus 70 ~-~~~i~i~~~~~~~-~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p-~~~ 145 (315)
+ |+.|++||+.... +..+ .|...|.+++|+|++.+|++++.|++|++||+++++....+. +...+.+++|+| +++
T Consensus 142 ~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~ 220 (393)
T 1erj_A 142 AEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPGDGK 220 (393)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSTTCC
T ss_pred cCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECCCCC
Confidence 7 8999999996544 3344 466889999999999999999999999999999998887776 556799999999 899
Q ss_pred EEEEEcCCCeEEEEcCCCCcceeEe-------ecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCC-----------
Q psy9936 146 CICLGHRNGTVTMWSPTVQKPLASL-------LCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLE----------- 207 (315)
Q Consensus 146 ~l~~~~~d~~i~i~d~~~~~~~~~~-------~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~----------- 207 (315)
+|++|+.|+.|++||+++++.+..+ .+|...|.+++|+|+|++|++|+.|+.|++||+++..
T Consensus 221 ~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~ 300 (393)
T 1erj_A 221 YIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSG 300 (393)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------
T ss_pred EEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCC
Confidence 9999999999999999998877766 5789999999999999999999999999999997641
Q ss_pred CCeeEeccCC-CceeEEEccCCeEE--EEcCCEEEecCC----------------Cceeec------ccccccccCCcch
Q psy9936 208 GPLNTFRTRT-PINNLAFSQRGLLA--TSRGNIVEFLKP----------------PEINFE------PRRKANKAGGSVQ 262 (315)
Q Consensus 208 ~~~~~~~~~~-~v~~~~~s~~g~~~--~~~~~~i~~~~~----------------~~~~~~------~~~~~~~~~~~~~ 262 (315)
.+...+..|. .|.+++|+|++.++ ++.|+.|++|++ .+++|+ |++..+++|+.++
T Consensus 301 ~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg 380 (393)
T 1erj_A 301 TCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDC 380 (393)
T ss_dssp CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTS
T ss_pred cceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCC
Confidence 2334455565 58999999999543 446899999987 345554 4788999999999
Q ss_pred hhhhhh
Q psy9936 263 RAKVKK 268 (315)
Q Consensus 263 ~~~~~~ 268 (315)
.++.+.
T Consensus 381 ~i~iW~ 386 (393)
T 1erj_A 381 KARIWK 386 (393)
T ss_dssp EEEEEE
T ss_pred cEEECc
Confidence 887764
No 26
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2e-38 Score=275.05 Aligned_cols=231 Identities=16% Similarity=0.233 Sum_probs=203.4
Q ss_pred cEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCCC-CEEEEee
Q psy9936 12 GIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQG-IELHCLK 88 (315)
Q Consensus 12 ~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~-~~~~~~~ 88 (315)
.|.+++|+|+|++|++|+.|+.|++||+.+++....+. |...|.+++|+|++.+|++++ |+.|++||+.. .....+.
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 204 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS 204 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE
Confidence 48999999999999999999999999999999888877 889999999999999888876 89999999954 4455567
Q ss_pred cCCceEEEEEcC-CCceEEEEcCCCeEEEEEccCCeEEEEe-------ccCCCCeEEEEEcCCCCEEEEEcCCCeEEEEc
Q psy9936 89 VLNKVTRMEFLP-YHFLLATASEEGYLSWLDTSIGKIVSDF-------SAKKGKLSVMTQNPYNACICLGHRNGTVTMWS 160 (315)
Q Consensus 89 ~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~-------~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d 160 (315)
+...+.+++|+| ++.+|++++.|+.|++||+.++..+..+ .+|...|.+++|+|+|++|++|+.|+.|++||
T Consensus 205 ~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd 284 (393)
T 1erj_A 205 IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWN 284 (393)
T ss_dssp CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 778899999999 8999999999999999999998877766 57889999999999999999999999999999
Q ss_pred CCCC------------cceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-CceeEEEcc-
Q psy9936 161 PTVQ------------KPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-PINNLAFSQ- 226 (315)
Q Consensus 161 ~~~~------------~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~s~- 226 (315)
+++. .+...+.+|...|.+++|+|++.+|++|+.|+.|++||+.++ .++..+..|. .|.+++|+|
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~-~~~~~l~~h~~~v~~v~~~~~ 363 (393)
T 1erj_A 285 LQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG-NPLLMLQGHRNSVISVAVANG 363 (393)
T ss_dssp C---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTC-CEEEEEECCSSCEEEEEECSS
T ss_pred CCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCC-eEEEEECCCCCCEEEEEecCC
Confidence 9753 345567789999999999999999999999999999999998 8888888876 699999986
Q ss_pred -----CCe--EEEEcCCEEEecCC
Q psy9936 227 -----RGL--LATSRGNIVEFLKP 243 (315)
Q Consensus 227 -----~g~--~~~~~~~~i~~~~~ 243 (315)
++. +.++.|++|++|+.
T Consensus 364 ~~~~p~~~~l~sgs~Dg~i~iW~~ 387 (393)
T 1erj_A 364 SSLGPEYNVFATGSGDCKARIWKY 387 (393)
T ss_dssp CTTCTTCEEEEEEETTSEEEEEEE
T ss_pred cCcCCCCCEEEEECCCCcEEECcc
Confidence 454 34456999999984
No 27
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=6e-39 Score=277.26 Aligned_cols=258 Identities=12% Similarity=0.146 Sum_probs=215.6
Q ss_pred EeeC-CCcEEEEEEcCCC-CEEEEEcCCCeEEEEEccCceEEEEec---CCCceeEEEEee-cCcEEEEEe-CCeEEEEe
Q psy9936 6 DLDL-QFGIYRMNYTKNG-RHLLLGGKRGHVAAFDWVRKTLACEMN---VMEEVYDIKWLH-LETMFAVAQ-KDWVYIYD 78 (315)
Q Consensus 6 ~~~~-~~~v~~~~~s~~~-~~l~~~~~dg~i~v~~~~~~~~~~~~~---~~~~v~~~~~~~-~~~~l~~~~-~~~i~i~~ 78 (315)
.+.. ...|.+++|+|++ ++|++|+.||.|++||+.+++....+. |...|.+++|+| ++.+|++++ |+.|++||
T Consensus 68 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd 147 (383)
T 3ei3_B 68 TASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRD 147 (383)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEE
T ss_pred eccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEE
Confidence 3444 7899999999999 899999999999999999887776654 888999999999 678888776 89999999
Q ss_pred CCCCEEEEeecC----CceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCC-EEEEEcCC
Q psy9936 79 NQGIELHCLKVL----NKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNA-CICLGHRN 153 (315)
Q Consensus 79 ~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~-~l~~~~~d 153 (315)
+.+..+..+... ..|.+++|+|++.+|++++.|+.|++||+ +++.+..+..|...|.+++|+|+++ +|++++.|
T Consensus 148 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d 226 (383)
T 3ei3_B 148 FSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVD 226 (383)
T ss_dssp TTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETT
T ss_pred CCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCC
Confidence 987776665432 67999999999999999999999999999 5788888999999999999999999 99999999
Q ss_pred CeEEEEcCCC----CcceeEeecccccEEEEEECC-CCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-----------
Q psy9936 154 GTVTMWSPTV----QKPLASLLCHKAGIQSVAVNH-TGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT----------- 217 (315)
Q Consensus 154 ~~i~i~d~~~----~~~~~~~~~~~~~i~~~~~sp-~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~----------- 217 (315)
+.|++||+++ +..+..+ +|...|.+++|+| ++.+|++++.|+.|++||++++ .....+..+.
T Consensus 227 ~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~ 304 (383)
T 3ei3_B 227 ATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDW-SKPDQIIIHPHRQFQHLTPIK 304 (383)
T ss_dssp SEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBT-TSCSEEEECCBCCCTTSCCCC
T ss_pred CEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCC-ccccccccccccccccccceE
Confidence 9999999997 5555555 6999999999999 9999999999999999999988 6655554331
Q ss_pred -------CceeEEEccCCeEEEEcCCEEEecCC------------------CceeecccccccccCCcchhhhhh
Q psy9936 218 -------PINNLAFSQRGLLATSRGNIVEFLKP------------------PEINFEPRRKANKAGGSVQRAKVK 267 (315)
Q Consensus 218 -------~v~~~~~s~~g~~~~~~~~~i~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~ 267 (315)
.+..++|+|+|.+.++.|+.|++|+. ..++|+|++.++++++ ++.++.+
T Consensus 305 ~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw 378 (383)
T 3ei3_B 305 ATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIW 378 (383)
T ss_dssp CEECSSSSEEEEECBCCTTTCTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEE
T ss_pred EeccCCCCceEEEecCCcccccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEE
Confidence 22335555555443346899999986 3458999999999996 6665554
No 28
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2e-38 Score=264.82 Aligned_cols=238 Identities=18% Similarity=0.206 Sum_probs=195.7
Q ss_pred EeeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccC--ceEEEEec-CCCceeEEEEeec--CcEEEEEe-CCeEEEEe
Q psy9936 6 DLDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVR--KTLACEMN-VMEEVYDIKWLHL--ETMFAVAQ-KDWVYIYD 78 (315)
Q Consensus 6 ~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~--~~~~~~~~-~~~~v~~~~~~~~--~~~l~~~~-~~~i~i~~ 78 (315)
.+.. ...|++++|+|+|++||+|+.|++|+||++.+ .+.+..+. |.++|.+++|+|+ +.+|++++ |++|++||
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd 83 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWK 83 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEE
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEE
Confidence 3444 78999999999999999999999999999874 35566666 8999999999864 78888876 89999999
Q ss_pred CCCC---EEEEe-ecCCceEEEEEcCC--CceEEEEcCCCeEEEEEccCCe--EEEEeccCCCCeEEEEEcCC-------
Q psy9936 79 NQGI---ELHCL-KVLNKVTRMEFLPY--HFLLATASEEGYLSWLDTSIGK--IVSDFSAKKGKLSVMTQNPY------- 143 (315)
Q Consensus 79 ~~~~---~~~~~-~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~~--~~~~~~~~~~~v~~~~~~p~------- 143 (315)
+... .+..+ .|...|.+++|+|+ +.+|++++.|+.|++||++++. ....+.+|...|.+++|+|+
T Consensus 84 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~ 163 (297)
T 2pm7_B 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 163 (297)
T ss_dssp BSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------
T ss_pred cCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccccccc
Confidence 9643 22333 46689999999998 8899999999999999998753 23567789999999999997
Q ss_pred ------CCEEEEEcCCCeEEEEcCCCCc----ceeEeecccccEEEEEECCCC---CEEEEeeCCCcEEEEEccCCCCC-
Q psy9936 144 ------NACICLGHRNGTVTMWSPTVQK----PLASLLCHKAGIQSVAVNHTG---TYMATSAGDSQLRIWDVRNLEGP- 209 (315)
Q Consensus 144 ------~~~l~~~~~d~~i~i~d~~~~~----~~~~~~~~~~~i~~~~~sp~g---~~l~~~~~d~~i~iwd~~~~~~~- 209 (315)
+++|++|+.|+.|++||+++++ ....+.+|...|.+++|+|++ .+|++++.|++|+|||+++....
T Consensus 164 ~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~ 243 (297)
T 2pm7_B 164 HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPW 243 (297)
T ss_dssp ------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCC
T ss_pred CCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCcc
Confidence 5799999999999999998765 556788999999999999995 89999999999999999875111
Q ss_pred e-eEe--ccC-CCceeEEEccCCeE--EEEcCCEEEecCC
Q psy9936 210 L-NTF--RTR-TPINNLAFSQRGLL--ATSRGNIVEFLKP 243 (315)
Q Consensus 210 ~-~~~--~~~-~~v~~~~~s~~g~~--~~~~~~~i~~~~~ 243 (315)
. ..+ ..+ ..|.+++|+|+|.+ .++.|+.|++|++
T Consensus 244 ~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~ 283 (297)
T 2pm7_B 244 KKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 283 (297)
T ss_dssp EEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEE
T ss_pred ceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEE
Confidence 1 222 222 36899999999953 3456899999984
No 29
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.1e-37 Score=262.89 Aligned_cols=235 Identities=13% Similarity=0.211 Sum_probs=205.0
Q ss_pred EeeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCCCC
Q psy9936 6 DLDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGI 82 (315)
Q Consensus 6 ~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~ 82 (315)
.+.. ...|.+++|+|++++|++++.|++|++||+.+++....+. |...|.+++|+|++.+|++++ |+.|++||+.+.
T Consensus 60 ~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~ 139 (319)
T 3frx_A 60 SFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ 139 (319)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC
T ss_pred EEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 3455 7889999999999999999999999999999999888877 889999999999999998887 899999999877
Q ss_pred EEEEe-ecCCceEEEEEcCC------CceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCe
Q psy9936 83 ELHCL-KVLNKVTRMEFLPY------HFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNGT 155 (315)
Q Consensus 83 ~~~~~-~~~~~v~~~~~~~~------~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~ 155 (315)
.+..+ .|...|.++.|+|. +..+++++.|+.|++||+.+++....+.+|...|.+++|+|+|++|++|+.|+.
T Consensus 140 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~ 219 (319)
T 3frx_A 140 CLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGE 219 (319)
T ss_dssp EEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCE
T ss_pred eEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 76654 46688999999985 448999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEecc---------CCCceeEEEcc
Q psy9936 156 VTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRT---------RTPINNLAFSQ 226 (315)
Q Consensus 156 i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~---------~~~v~~~~~s~ 226 (315)
|++||+++++++..+.. ...|.+++|+|++.+|++++.+ .+++|++... ..+..+.. ...+.+++|+|
T Consensus 220 i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~sp 296 (319)
T 3frx_A 220 IMLWNLAAKKAMYTLSA-QDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQ-YLVDDLRPEFAGYSKAAEPHAVSLAWSA 296 (319)
T ss_dssp EEEEETTTTEEEEEEEC-CSCEEEEEECSSSSEEEEEETT-EEEEEEETTE-EEEEEECCCCTTCCGGGCCCEEEEEECT
T ss_pred EEEEECCCCcEEEEecC-CCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcC-eeeeccCccccccccCcCcceeEEEECC
Confidence 99999999998888874 5789999999999999988765 4999999876 55554432 22478999999
Q ss_pred CCeEE--EEcCCEEEecCC
Q psy9936 227 RGLLA--TSRGNIVEFLKP 243 (315)
Q Consensus 227 ~g~~~--~~~~~~i~~~~~ 243 (315)
||.++ ++.|+.|++|+.
T Consensus 297 dg~~l~sg~~Dg~i~vWd~ 315 (319)
T 3frx_A 297 DGQTLFAGYTDNVIRVWQV 315 (319)
T ss_dssp TSSEEEEEETTSCEEEEEE
T ss_pred CCCEEEEeecCceEEEEEE
Confidence 99644 446999999984
No 30
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=6.5e-38 Score=265.33 Aligned_cols=255 Identities=16% Similarity=0.183 Sum_probs=218.6
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceE---EEEe---cCCCceeEEEEeecCcEEEEEe-CCeEEEEeCCCC
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTL---ACEM---NVMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGI 82 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~---~~~~---~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~ 82 (315)
..+|.+++|+|++++|++++ ||.|++|++.++.. ...+ .|...+.+++|+|++++|++++ ++.|++||+...
T Consensus 51 ~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 129 (337)
T 1gxr_A 51 GEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAP 129 (337)
T ss_dssp SSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC
T ss_pred CCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCC
Confidence 78899999999999999998 99999999987642 2222 4778999999999999888876 899999999654
Q ss_pred E---EEEe-ecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCeEEE
Q psy9936 83 E---LHCL-KVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNGTVTM 158 (315)
Q Consensus 83 ~---~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i 158 (315)
. ...+ .+...+.+++|+|+++++++++.||.|++||+.+++.+..+..|...+.+++|+|++++|++++.|+.|++
T Consensus 130 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~ 209 (337)
T 1gxr_A 130 TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRS 209 (337)
T ss_dssp --EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred CcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEE
Confidence 3 2223 35578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCCCceeEEEccCCeE--EEEcCC
Q psy9936 159 WSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRTPINNLAFSQRGLL--ATSRGN 236 (315)
Q Consensus 159 ~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~--~~~~~~ 236 (315)
||+++++.+..+. +...+.+++|+|++++|++++.++.|++||+.+. ..........++.+++|+|++.+ .++.++
T Consensus 210 ~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 287 (337)
T 1gxr_A 210 WDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKP-DKYQLHLHESCVLSLKFAYCGKWFVSTGKDN 287 (337)
T ss_dssp EETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSS-CEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC-CeEEEcCCccceeEEEECCCCCEEEEecCCC
Confidence 9999998887775 7889999999999999999999999999999987 54433333447999999999953 344589
Q ss_pred EEEecCC---------------CceeecccccccccCCcchhhhhh
Q psy9936 237 IVEFLKP---------------PEINFEPRRKANKAGGSVQRAKVK 267 (315)
Q Consensus 237 ~i~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~ 267 (315)
.|++|+. ..+.|+|+++++++++.++.++.+
T Consensus 288 ~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw 333 (337)
T 1gxr_A 288 LLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVY 333 (337)
T ss_dssp EEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSCEEEE
T ss_pred cEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEEecCCCeEEEE
Confidence 9999986 568899999999999888766544
No 31
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.5e-37 Score=264.53 Aligned_cols=236 Identities=13% Similarity=0.182 Sum_probs=202.2
Q ss_pred EeeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCc------eEEEEe-cCCCceeEEEEeecCcEEEEEe-CCeEEE
Q psy9936 6 DLDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRK------TLACEM-NVMEEVYDIKWLHLETMFAVAQ-KDWVYI 76 (315)
Q Consensus 6 ~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~------~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~i 76 (315)
.+.. ...|.+++|+|+|.+|++++.|+.+++|++... .....+ .|...|.+++|+|++..|++++ |++|++
T Consensus 101 ~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~l 180 (354)
T 2pbi_B 101 AVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCAL 180 (354)
T ss_dssp EEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEE
T ss_pred EEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEE
Confidence 3444 567899999999999999999999999998643 122333 3888999999999998877776 899999
Q ss_pred EeCC-CCEEEEee-cCCceEEEEEcCC--CceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcC
Q psy9936 77 YDNQ-GIELHCLK-VLNKVTRMEFLPY--HFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHR 152 (315)
Q Consensus 77 ~~~~-~~~~~~~~-~~~~v~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~ 152 (315)
||+. +..+..+. |...|.+++|+|+ +++|++++.||.|++||+++++.+..+..|...|++++|+|++++|++|+.
T Consensus 181 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~ 260 (354)
T 2pbi_B 181 WDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSD 260 (354)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeC
Confidence 9995 45555554 6688999999884 689999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEcCCCCcceeEeecc--cccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-CceeEEEccCCe
Q psy9936 153 NGTVTMWSPTVQKPLASLLCH--KAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-PINNLAFSQRGL 229 (315)
Q Consensus 153 d~~i~i~d~~~~~~~~~~~~~--~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~g~ 229 (315)
|++|++||+++++.+..+..+ ...+.+++|+|+|.+|++|+.|+.|++||+.++ .++..+..|. .|++++|+|+|.
T Consensus 261 D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~-~~~~~l~~h~~~v~~l~~spdg~ 339 (354)
T 2pbi_B 261 DATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKG-SRVSILFGHENRVSTLRVSPDGT 339 (354)
T ss_dssp TSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-SEEEEECCCSSCEEEEEECTTSS
T ss_pred CCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCC-ceEEEEECCCCcEEEEEECCCCC
Confidence 999999999988777666533 357899999999999999999999999999988 8888887776 699999999995
Q ss_pred --EEEEcCCEEEecC
Q psy9936 230 --LATSRGNIVEFLK 242 (315)
Q Consensus 230 --~~~~~~~~i~~~~ 242 (315)
+.++.|++|++|+
T Consensus 340 ~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 340 AFCSGSWDHTLRVWA 354 (354)
T ss_dssp CEEEEETTSEEEEEC
T ss_pred EEEEEcCCCCEEecC
Confidence 3445699999985
No 32
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4.2e-38 Score=270.33 Aligned_cols=233 Identities=12% Similarity=0.120 Sum_probs=203.4
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCce--EEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCCCCEEE
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKT--LACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGIELH 85 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~--~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~~~~ 85 (315)
..+|++++|+|++++|++++.++.|++||+.+++ ....+. |...|.+++|+|++++|++++ |+.|++||+......
T Consensus 8 ~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 87 (372)
T 1k8k_C 8 VEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWK 87 (372)
T ss_dssp SSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEE
T ss_pred CCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeee
Confidence 6889999999999999999999999999999987 666665 889999999999999998876 899999999655422
Q ss_pred -E---eecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeE----EEEeccCCCCeEEEEEcCCCCEEEEEcCCCeEE
Q psy9936 86 -C---LKVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKI----VSDFSAKKGKLSVMTQNPYNACICLGHRNGTVT 157 (315)
Q Consensus 86 -~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~----~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~ 157 (315)
. ..+...|.+++|+|++++|++++.|+.|++||+..+.. ......|...|.+++|+|++++|++++.|+.|+
T Consensus 88 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 167 (372)
T 1k8k_C 88 PTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCR 167 (372)
T ss_dssp EEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEE
Confidence 2 34668899999999999999999999999999988752 233456889999999999999999999999999
Q ss_pred EEcCC------------------CCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-C
Q psy9936 158 MWSPT------------------VQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-P 218 (315)
Q Consensus 158 i~d~~------------------~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~ 218 (315)
+||++ .++.+..+.+|...|.+++|+|++.+|++++.|+.|++||++++ +++..+..+. +
T Consensus 168 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~ 246 (372)
T 1k8k_C 168 IFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKK-MAVATLASETLP 246 (372)
T ss_dssp EEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGT-TEEEEEECSSCC
T ss_pred EEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCC-ceeEEEccCCCC
Confidence 99954 56788888889999999999999999999999999999999998 8888888776 7
Q ss_pred ceeEEEccCCe-EEEEcCCEEEecCC
Q psy9936 219 INNLAFSQRGL-LATSRGNIVEFLKP 243 (315)
Q Consensus 219 v~~~~~s~~g~-~~~~~~~~i~~~~~ 243 (315)
+.+++|+|++. ++++.|+.|++|+.
T Consensus 247 v~~~~~~~~~~~l~~~~d~~i~i~~~ 272 (372)
T 1k8k_C 247 LLAVTFITESSLVAAGHDCFPVLFTY 272 (372)
T ss_dssp EEEEEEEETTEEEEEETTSSCEEEEE
T ss_pred eEEEEEecCCCEEEEEeCCeEEEEEc
Confidence 99999999996 44556888877653
No 33
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=5.8e-39 Score=282.16 Aligned_cols=257 Identities=13% Similarity=0.166 Sum_probs=206.8
Q ss_pred CCcEEEEEEcC-CCCEEEEEcCCCeEEEEEccCceEEEEe---cCCCceeEEEEee-cCcEEEEEe-CCeEEEEeCCCCE
Q psy9936 10 QFGIYRMNYTK-NGRHLLLGGKRGHVAAFDWVRKTLACEM---NVMEEVYDIKWLH-LETMFAVAQ-KDWVYIYDNQGIE 83 (315)
Q Consensus 10 ~~~v~~~~~s~-~~~~l~~~~~dg~i~v~~~~~~~~~~~~---~~~~~v~~~~~~~-~~~~l~~~~-~~~i~i~~~~~~~ 83 (315)
+..|+|++|+| ++.+||+|+.||.|+|||+.+++....+ .|.+.|++++|+| ++.+|++++ |++|++||+++..
T Consensus 119 ~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~ 198 (435)
T 4e54_B 119 DRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNI 198 (435)
T ss_dssp SSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCE
T ss_pred CCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCc
Confidence 67799999999 5679999999999999999877644333 3889999999998 678888776 8999999998776
Q ss_pred EEEeecC----CceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCC-EEEEEcCCCeEEE
Q psy9936 84 LHCLKVL----NKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNA-CICLGHRNGTVTM 158 (315)
Q Consensus 84 ~~~~~~~----~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~-~l~~~~~d~~i~i 158 (315)
...+... ..+.+++|+|++.+|++|+.||.|++||++ ++.+..+.+|...|.+++|+|++. +|++|+.|+.|++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~i 277 (435)
T 4e54_B 199 LRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKI 277 (435)
T ss_dssp EEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCE
T ss_pred eeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCcceeeE
Confidence 6655432 457889999999999999999999999986 566777889999999999999886 7889999999999
Q ss_pred EcCCCCcceeE---eecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-------CceeEEEccCC
Q psy9936 159 WSPTVQKPLAS---LLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-------PINNLAFSQRG 228 (315)
Q Consensus 159 ~d~~~~~~~~~---~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-------~v~~~~~s~~g 228 (315)
||+++.+.... ..+|..+|++++|+|+|.+|++++.|+.|+|||+.++ .....+..|. .+....|+|++
T Consensus 278 wd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (435)
T 4e54_B 278 WDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQW-DCPLGLIPHPHRHFQHLTPIKAAWHPRY 356 (435)
T ss_dssp EETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSS-SSEEEECCCCCCCCSSSCCCBCEECSSS
T ss_pred EecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCC-ccceEEecccccccccceeEEEEEcCCC
Confidence 99998765433 3579999999999999999999999999999999988 6665554432 23456777776
Q ss_pred e-EEEE-------------cCCEEEecCC-----------------Cce-eecccccccccCCcchhhhhhhh
Q psy9936 229 L-LATS-------------RGNIVEFLKP-----------------PEI-NFEPRRKANKAGGSVQRAKVKKI 269 (315)
Q Consensus 229 ~-~~~~-------------~~~~i~~~~~-----------------~~~-~~~~~~~~~~~~~~~~~~~~~~~ 269 (315)
. ++++ .++.|++|+. .++ +|+|++.++++|+ ++.++.+..
T Consensus 357 ~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~ 428 (435)
T 4e54_B 357 NLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQ 428 (435)
T ss_dssp SCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCC
T ss_pred CEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEEC
Confidence 3 2222 1246888865 333 6999999999876 556666653
No 34
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=4.1e-37 Score=279.36 Aligned_cols=258 Identities=16% Similarity=0.279 Sum_probs=226.8
Q ss_pred EeeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCCCC
Q psy9936 6 DLDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGI 82 (315)
Q Consensus 6 ~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~ 82 (315)
.+.. ...|.+++|+|+++.|++++.|+.|++|+.. ++....+. |...|.+++|+|++.+|++++ |+.|++||.++.
T Consensus 257 ~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~ 335 (577)
T 2ymu_A 257 TLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ 335 (577)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSC
T ss_pred EEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCC-CcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC
Confidence 3444 7889999999999999999999999999965 45555555 889999999999999998876 899999999887
Q ss_pred EEEEee-cCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCeEEEEcC
Q psy9936 83 ELHCLK-VLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNGTVTMWSP 161 (315)
Q Consensus 83 ~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~ 161 (315)
.+..+. +...+.+++|+|++.+|++++.|+.|++||. +++.+..+..|...|.+++|+|+|++|++++.|+.|++||.
T Consensus 336 ~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~ 414 (577)
T 2ymu_A 336 HLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR 414 (577)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred eeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC
Confidence 766654 5588999999999999999999999999995 57888889999999999999999999999999999999996
Q ss_pred CCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-CceeEEEccCCeEEE--EcCCEE
Q psy9936 162 TVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-PINNLAFSQRGLLAT--SRGNIV 238 (315)
Q Consensus 162 ~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~g~~~~--~~~~~i 238 (315)
+++.+..+.+|...|++++|+|++++|++++.|+.|++||... +.+..+..|. +|++++|+|++.+++ +.|+.|
T Consensus 415 -~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~--~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i 491 (577)
T 2ymu_A 415 -NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNG--QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTV 491 (577)
T ss_dssp -TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTS--CEEEEEECCSSCEEEEEECTTSCEEEEEETTSEE
T ss_pred -CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCC--CEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEE
Confidence 4677888999999999999999999999999999999999754 6777777765 699999999996444 468999
Q ss_pred EecCC---------------CceeecccccccccCCcchhhhhhh
Q psy9936 239 EFLKP---------------PEINFEPRRKANKAGGSVQRAKVKK 268 (315)
Q Consensus 239 ~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (315)
++|+. ++++|+|+++++++++.++.++.+.
T Consensus 492 ~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd 536 (577)
T 2ymu_A 492 KLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWN 536 (577)
T ss_dssp EEEETTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEe
Confidence 99976 6789999999999999999887764
No 35
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.2e-36 Score=259.15 Aligned_cols=233 Identities=14% Similarity=0.173 Sum_probs=195.0
Q ss_pred eeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCCCCE
Q psy9936 7 LDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGIE 83 (315)
Q Consensus 7 ~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~~ 83 (315)
+.. ...|.+++|+|++.+|++++.|++|++||+.+++....+. |...|.+++|+|++++|++++ |+.|++||+.+..
T Consensus 72 l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~ 151 (343)
T 2xzm_R 72 LTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC 151 (343)
T ss_dssp ECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCE
T ss_pred hccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc
Confidence 444 6789999999999999999999999999999999888876 889999999999999888876 8999999997655
Q ss_pred EEEe----ecCCceEEEEEcCCC----------ceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEE
Q psy9936 84 LHCL----KVLNKVTRMEFLPYH----------FLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICL 149 (315)
Q Consensus 84 ~~~~----~~~~~v~~~~~~~~~----------~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~ 149 (315)
.... .|...|.+++|+|++ .+|++++.|+.|++||. .+.....+..|...|.+++|+|+|++|++
T Consensus 152 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~s 230 (343)
T 2xzm_R 152 KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIAT 230 (343)
T ss_dssp EEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred eeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEE
Confidence 4443 355789999999986 68999999999999994 56777788899999999999999999999
Q ss_pred EcCCCeEEEEcCCC-CcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCee--Eec-----------c
Q psy9936 150 GHRNGTVTMWSPTV-QKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLN--TFR-----------T 215 (315)
Q Consensus 150 ~~~d~~i~i~d~~~-~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~--~~~-----------~ 215 (315)
|+.|+.|++||+++ ..+...+. +...|.+++|+|++.+++++ .|+.|++||+.+. .... .+. .
T Consensus 231 gs~dg~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~-~~~~~~~~~~~~~~~~~~~~~ 307 (343)
T 2xzm_R 231 GGKDKKLLIWDILNLTYPQREFD-AGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQ-SKAPVCTIEAEPITKAEGQKG 307 (343)
T ss_dssp EETTCEEEEEESSCCSSCSEEEE-CSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSC-CSCSEEECCCCSGGGBTTBCC
T ss_pred EcCCCeEEEEECCCCcccceeec-CCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCC-CCCceEEeecCcchhhhhhcC
Confidence 99999999999954 44444443 56779999999999988755 5778999999876 4433 332 2
Q ss_pred CC-CceeEEEccCCe--EEEEcCCEEEecCC
Q psy9936 216 RT-PINNLAFSQRGL--LATSRGNIVEFLKP 243 (315)
Q Consensus 216 ~~-~v~~~~~s~~g~--~~~~~~~~i~~~~~ 243 (315)
|. .+.+++|+|+|. +.++.|+.|++|+.
T Consensus 308 ~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~ 338 (343)
T 2xzm_R 308 KNPQCTSLAWNALGKKLFAGFTDGVIRTFSF 338 (343)
T ss_dssp SCCCEEEEEECSSSCCEEEEETTSEEEEEEE
T ss_pred CCCceEEEEECCCCCeEEEecCCceEEEEEE
Confidence 33 589999999994 34456999999974
No 36
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=8.4e-38 Score=275.14 Aligned_cols=231 Identities=13% Similarity=0.237 Sum_probs=190.9
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCce-----------EEEEec-CC------------CceeEEEEeecC--
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKT-----------LACEMN-VM------------EEVYDIKWLHLE-- 63 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~-----------~~~~~~-~~------------~~v~~~~~~~~~-- 63 (315)
.+.|.+++|+|+|++||+|+.||.|+||++.+++ ....+. |. ..|.+++|+|++
T Consensus 28 ~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~ 107 (447)
T 3dw8_B 28 ADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNA 107 (447)
T ss_dssp GGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSS
T ss_pred cCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCc
Confidence 5799999999999999999999999999998776 355555 76 789999999987
Q ss_pred cEEEEE-eCCeEEEEeCCCCEEE----------------------------------------E--eecCCceEEEEEcC
Q psy9936 64 TMFAVA-QKDWVYIYDNQGIELH----------------------------------------C--LKVLNKVTRMEFLP 100 (315)
Q Consensus 64 ~~l~~~-~~~~i~i~~~~~~~~~----------------------------------------~--~~~~~~v~~~~~~~ 100 (315)
.+|+++ .|+.|++|++...... . ..|...|.+++|+|
T Consensus 108 ~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 187 (447)
T 3dw8_B 108 AQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINS 187 (447)
T ss_dssp SEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECT
T ss_pred ceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcC
Confidence 566655 4899999998542211 1 23668899999999
Q ss_pred CCceEEEEcCCCeEEEEEccC-CeEEE-------EeccCCCCeEEEEEcCCC-CEEEEEcCCCeEEEEcCCCCcc----e
Q psy9936 101 YHFLLATASEEGYLSWLDTSI-GKIVS-------DFSAKKGKLSVMTQNPYN-ACICLGHRNGTVTMWSPTVQKP----L 167 (315)
Q Consensus 101 ~~~~l~~~~~d~~i~~~d~~~-~~~~~-------~~~~~~~~v~~~~~~p~~-~~l~~~~~d~~i~i~d~~~~~~----~ 167 (315)
++.+|+++ .|+.|++||+.+ ++.+. .+..|...|.+++|+|++ ++|++|+.|+.|++||+++++. +
T Consensus 188 ~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 266 (447)
T 3dw8_B 188 DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHS 266 (447)
T ss_dssp TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTC
T ss_pred CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccccee
Confidence 99999998 799999999984 34444 256799999999999998 8999999999999999999876 7
Q ss_pred eEeecccc------------cEEEEEECCCCCEEEEeeCCCcEEEEEccC-CCCCeeEeccCCCce--------------
Q psy9936 168 ASLLCHKA------------GIQSVAVNHTGTYMATSAGDSQLRIWDVRN-LEGPLNTFRTRTPIN-------------- 220 (315)
Q Consensus 168 ~~~~~~~~------------~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~v~-------------- 220 (315)
..+..|.. .|.+++|+|+|++|++++. +.|++||+++ + .++..+..|..+.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~i~~ 344 (447)
T 3dw8_B 267 KLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMEN-RPVETYQVHEYLRSKLCSLYENDCIFD 344 (447)
T ss_dssp EEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCS-SCSCCEESCGGGTTTHHHHHHTSGGGC
T ss_pred eEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCc-cccceeecccccccccccccccccccc
Confidence 78887776 8999999999999999999 9999999997 5 8888888776433
Q ss_pred --eEEEccCCeEEE--EcCCEEEecCC
Q psy9936 221 --NLAFSQRGLLAT--SRGNIVEFLKP 243 (315)
Q Consensus 221 --~~~~s~~g~~~~--~~~~~i~~~~~ 243 (315)
.++|+|+|.+++ +.|+.|++|+.
T Consensus 345 ~~~~~~s~~~~~l~s~s~dg~v~iwd~ 371 (447)
T 3dw8_B 345 KFECCWNGSDSVVMTGSYNNFFRMFDR 371 (447)
T ss_dssp CCCEEECTTSSEEEEECSTTEEEEEET
T ss_pred ceEEEECCCCCEEEEeccCCEEEEEEc
Confidence 399999995433 45899999975
No 37
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-38 Score=275.90 Aligned_cols=259 Identities=17% Similarity=0.233 Sum_probs=224.2
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccC----ceEEEEec-CCCceeEEEEeec-CcEEEEEe-CCeEEEEeCCCC
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVR----KTLACEMN-VMEEVYDIKWLHL-ETMFAVAQ-KDWVYIYDNQGI 82 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~----~~~~~~~~-~~~~v~~~~~~~~-~~~l~~~~-~~~i~i~~~~~~ 82 (315)
...|.+++|+|++++|++++.||.|++|++.+ .+....+. |...|.+++|+|+ +.+|++++ |+.|++||+...
T Consensus 67 ~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 146 (416)
T 2pm9_A 67 DSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKC 146 (416)
T ss_dssp SSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTT
T ss_pred CCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCC
Confidence 67899999999999999999999999999987 34566665 8899999999998 88888876 899999999543
Q ss_pred E-------EEE----eecCCceEEEEEcCC-CceEEEEcCCCeEEEEEccCCeEEEEeccC------CCCeEEEEEcCCC
Q psy9936 83 E-------LHC----LKVLNKVTRMEFLPY-HFLLATASEEGYLSWLDTSIGKIVSDFSAK------KGKLSVMTQNPYN 144 (315)
Q Consensus 83 ~-------~~~----~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~------~~~v~~~~~~p~~ 144 (315)
. ... ..|...|.+++|+|+ +.+|++++.|+.|++||+++++.+..+..+ ...+.+++|+|++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 226 (416)
T 2pm9_A 147 TESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKN 226 (416)
T ss_dssp SSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSC
T ss_pred ccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCC
Confidence 2 222 235688999999999 789999999999999999999998888776 7889999999997
Q ss_pred -CEEEEEcCCC---eEEEEcCCCC-cceeEee-cccccEEEEEECC-CCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC
Q psy9936 145 -ACICLGHRNG---TVTMWSPTVQ-KPLASLL-CHKAGIQSVAVNH-TGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT 217 (315)
Q Consensus 145 -~~l~~~~~d~---~i~i~d~~~~-~~~~~~~-~~~~~i~~~~~sp-~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 217 (315)
.++++++.|+ .|++||++++ .++..+. +|...|.+++|+| ++.+|++++.|+.|++||++++ +++..+..|.
T Consensus 227 ~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~-~~~~~~~~~~ 305 (416)
T 2pm9_A 227 STRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESA-EQLSQFPARG 305 (416)
T ss_dssp TTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSC-CEEEEEECSS
T ss_pred CCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCC-ccceeecCCC
Confidence 5899999998 9999999986 6777887 8999999999999 8999999999999999999998 8888888776
Q ss_pred -CceeEEEccCC-eEEE--EcCCEEEecCC--------------------------------------------------
Q psy9936 218 -PINNLAFSQRG-LLAT--SRGNIVEFLKP-------------------------------------------------- 243 (315)
Q Consensus 218 -~v~~~~~s~~g-~~~~--~~~~~i~~~~~-------------------------------------------------- 243 (315)
.|.+++|+|++ .+++ +.|+.|++|+.
T Consensus 306 ~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (416)
T 2pm9_A 306 NWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEP 385 (416)
T ss_dssp SCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCC
T ss_pred CceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCC
Confidence 69999999998 4444 34899998864
Q ss_pred -CceeecccccccccCCcchhhhhhhh
Q psy9936 244 -PEINFEPRRKANKAGGSVQRAKVKKI 269 (315)
Q Consensus 244 -~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (315)
..++|+|+|+++++++.++.++.+..
T Consensus 386 ~~~~~~s~dg~~la~~~~d~~v~~w~~ 412 (416)
T 2pm9_A 386 SPAAHWAFGGKLVQITPDGKGVSITNP 412 (416)
T ss_dssp SCCCEEETTTEEECBCTTSSCBCCBCC
T ss_pred ccceEEeeCCeEEEEeCCCCeEEEEEe
Confidence 25679999999999999888776654
No 38
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=5.5e-38 Score=268.86 Aligned_cols=232 Identities=14% Similarity=0.148 Sum_probs=190.0
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEE-----EecCCCceeEEEEeecCcEEEEEe-CCeEEEEeCCCC-
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLAC-----EMNVMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGI- 82 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~- 82 (315)
..+|.+++|+|++.++ +++.||+|+|||+.+++... ...|...|.+++|+|++++|++++ |+.|++||+...
T Consensus 94 ~~~V~~~~~s~d~~~l-~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~ 172 (357)
T 4g56_B 94 EAGVTDVAWVSEKGIL-VASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKA 172 (357)
T ss_dssp SSCEEEEEEETTTEEE-EEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTE
T ss_pred CCCEEEEEEcCCCCEE-EEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc
Confidence 6789999999998654 56789999999998876432 224788999999999999999886 899999999654
Q ss_pred EEEEee-cCCceEEEEEcCCCc-eEEEEcCCCeEEEEEccCCeEEEEec--cCCCCeEEEEEcCCC-CEEEEEcCCCeEE
Q psy9936 83 ELHCLK-VLNKVTRMEFLPYHF-LLATASEEGYLSWLDTSIGKIVSDFS--AKKGKLSVMTQNPYN-ACICLGHRNGTVT 157 (315)
Q Consensus 83 ~~~~~~-~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~--~~~~~v~~~~~~p~~-~~l~~~~~d~~i~ 157 (315)
.+..+. |...|.+++|+|++. ++++++.|+.|++||+++++....+. .+...+.+++|+|++ .+|++|+.|+.|+
T Consensus 173 ~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~ 252 (357)
T 4g56_B 173 VLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVS 252 (357)
T ss_dssp EEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEE
T ss_pred EEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeeccccee
Confidence 444443 568999999999874 78999999999999999887766543 466779999999975 5889999999999
Q ss_pred EEcCCCCcceeEeecccccEEEEEECCCC-CEEEEeeCCCcEEEEEccCCCCCeeEeccCCCceeEEEcc-CCeE--EEE
Q psy9936 158 MWSPTVQKPLASLLCHKAGIQSVAVNHTG-TYMATSAGDSQLRIWDVRNLEGPLNTFRTRTPINNLAFSQ-RGLL--ATS 233 (315)
Q Consensus 158 i~d~~~~~~~~~~~~~~~~i~~~~~sp~g-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~-~g~~--~~~ 233 (315)
+||+++++++..+.+|...|++++|+|++ ++||+|+.|++|+|||++++ +++..+.....|++++|+| ++.+ .++
T Consensus 253 ~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~-~~~~~~~H~~~V~~vafsP~d~~~l~s~s 331 (357)
T 4g56_B 253 LVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS-EVFRDLSHRDFVTGVAWSPLDHSKFTTVG 331 (357)
T ss_dssp EEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC-EEEEECCCSSCEEEEEECSSSTTEEEEEE
T ss_pred EEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC-cEeEECCCCCCEEEEEEeCCCCCEEEEEc
Confidence 99999999999999999999999999997 58999999999999999998 7776665445799999999 6743 345
Q ss_pred cCCEEEecCC
Q psy9936 234 RGNIVEFLKP 243 (315)
Q Consensus 234 ~~~~i~~~~~ 243 (315)
.|++|++|++
T Consensus 332 ~Dg~v~iW~~ 341 (357)
T 4g56_B 332 WDHKVLHHHL 341 (357)
T ss_dssp TTSCEEEEEC
T ss_pred CCCeEEEEEC
Confidence 6999999985
No 39
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4.2e-38 Score=265.17 Aligned_cols=234 Identities=17% Similarity=0.195 Sum_probs=192.5
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCce--EEEEec-CCCceeEEEEee--cCcEEEEEe-CCeEEEEeCCCC-
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKT--LACEMN-VMEEVYDIKWLH--LETMFAVAQ-KDWVYIYDNQGI- 82 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~--~~~~~~-~~~~v~~~~~~~--~~~~l~~~~-~~~i~i~~~~~~- 82 (315)
...|++++|+|+|++||+|+.|++|+|||+.++. .+..+. |...|.+++|+| ++.+|++++ |++|++||+...
T Consensus 13 ~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~ 92 (316)
T 3bg1_A 13 EDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGT 92 (316)
T ss_dssp -CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSC
T ss_pred cCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCc
Confidence 7899999999999999999999999999998775 345555 899999999986 377888776 899999999643
Q ss_pred --EEEEe-ecCCceEEEEEcCC--CceEEEEcCCCeEEEEEccCCeE---EEEeccCCCCeEEEEEcCC-----------
Q psy9936 83 --ELHCL-KVLNKVTRMEFLPY--HFLLATASEEGYLSWLDTSIGKI---VSDFSAKKGKLSVMTQNPY----------- 143 (315)
Q Consensus 83 --~~~~~-~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~~~---~~~~~~~~~~v~~~~~~p~----------- 143 (315)
....+ .|...|.+++|+|+ +.+|++++.|+.|++||+..+.. ...+.+|...+.+++|+|+
T Consensus 93 ~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~ 172 (316)
T 3bg1_A 93 WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPS 172 (316)
T ss_dssp CCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CC
T ss_pred ceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcccccccc
Confidence 33333 46689999999998 78999999999999999987532 3456678889999999997
Q ss_pred ------CCEEEEEcCCCeEEEEcCCCC---cceeEeecccccEEEEEECCCC----CEEEEeeCCCcEEEEEccCCC--C
Q psy9936 144 ------NACICLGHRNGTVTMWSPTVQ---KPLASLLCHKAGIQSVAVNHTG----TYMATSAGDSQLRIWDVRNLE--G 208 (315)
Q Consensus 144 ------~~~l~~~~~d~~i~i~d~~~~---~~~~~~~~~~~~i~~~~~sp~g----~~l~~~~~d~~i~iwd~~~~~--~ 208 (315)
+++|++|+.|+.|++||++.. +++..+.+|..+|.+++|+|++ .+|++++.|++|++|++.+.. .
T Consensus 173 ~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~ 252 (316)
T 3bg1_A 173 GQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNT 252 (316)
T ss_dssp SCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCC
T ss_pred ccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccc
Confidence 468999999999999999755 4567788999999999999986 799999999999999998631 1
Q ss_pred -CeeEeccC-CCceeEEEccCCeE--EEEcCCEEEecCC
Q psy9936 209 -PLNTFRTR-TPINNLAFSQRGLL--ATSRGNIVEFLKP 243 (315)
Q Consensus 209 -~~~~~~~~-~~v~~~~~s~~g~~--~~~~~~~i~~~~~ 243 (315)
....+..+ ..|.+++|+|+|.+ .++.|++|++|+.
T Consensus 253 ~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~ 291 (316)
T 3bg1_A 253 WSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKE 291 (316)
T ss_dssp CBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEE
T ss_pred hhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEE
Confidence 12233333 46999999999953 4456999999985
No 40
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.8e-37 Score=260.57 Aligned_cols=234 Identities=17% Similarity=0.248 Sum_probs=192.6
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCce--EEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCCCC-E-
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKT--LACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGI-E- 83 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~--~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~-~- 83 (315)
...|.+++|+|+|++|++++.|+.|++|++.++. ....+. |...|.+++|+|++++|++++ |+.|++||+... .
T Consensus 61 ~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~ 140 (345)
T 3fm0_A 61 QRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEY 140 (345)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCE
T ss_pred CCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCe
Confidence 6789999999999999999999999999987764 455565 889999999999999999887 899999998532 2
Q ss_pred --EEEe-ecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCe--EEEEeccCCCCeEEEEEcCCCCEEEEEcCCCeEEE
Q psy9936 84 --LHCL-KVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGK--IVSDFSAKKGKLSVMTQNPYNACICLGHRNGTVTM 158 (315)
Q Consensus 84 --~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~--~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i 158 (315)
+..+ .|...|.+++|+|++.+|++++.|+.|++||+.++. ....+.+|...|.+++|+|+|++|++|+.|++|++
T Consensus 141 ~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~i 220 (345)
T 3fm0_A 141 ECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRI 220 (345)
T ss_dssp EEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred EEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEE
Confidence 2223 356889999999999999999999999999998875 44678899999999999999999999999999999
Q ss_pred EcCCCC---------------cceeEeec-ccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCC---CCeeE-----ec
Q psy9936 159 WSPTVQ---------------KPLASLLC-HKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLE---GPLNT-----FR 214 (315)
Q Consensus 159 ~d~~~~---------------~~~~~~~~-~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~---~~~~~-----~~ 214 (315)
||.... +++..+.+ |...|.+++|+|++.+|++++.|+.|++|+..... .+... ..
T Consensus 221 W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~ 300 (345)
T 3fm0_A 221 WRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQ 300 (345)
T ss_dssp EEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETT
T ss_pred eccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecc
Confidence 996422 12334444 88899999999999999999999999999987641 11111 23
Q ss_pred cCC-CceeEEEccCC-eEE--EEcCCEEEecCC
Q psy9936 215 TRT-PINNLAFSQRG-LLA--TSRGNIVEFLKP 243 (315)
Q Consensus 215 ~~~-~v~~~~~s~~g-~~~--~~~~~~i~~~~~ 243 (315)
.|. .|++++|+|++ .++ ++.|++|++|+.
T Consensus 301 ~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~ 333 (345)
T 3fm0_A 301 AHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKY 333 (345)
T ss_dssp SSSSCEEEEEECSSSTTEEEEEETTSCEEEEEE
T ss_pred cccCcEeEeEEeCCCceEEEEcCCCCcEEEEEe
Confidence 444 69999999987 233 446999999985
No 41
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=8.3e-39 Score=275.64 Aligned_cols=237 Identities=13% Similarity=0.138 Sum_probs=194.5
Q ss_pred EEeeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCc--eEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeC
Q psy9936 5 FDLDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRK--TLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDN 79 (315)
Q Consensus 5 ~~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~--~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~ 79 (315)
..... ..+|++++|+|++++|++++.|+.|++|++.++ +....+. |...|.+++|+|++++|++++ |+.|++||+
T Consensus 5 ~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~ 84 (377)
T 3dwl_C 5 QVLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEK 84 (377)
T ss_dssp EEEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC--
T ss_pred eeEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEc
Confidence 33444 689999999999999999999999999999988 5666665 888999999999999888887 899999999
Q ss_pred CCCE----EEE-eecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCe---EEEEecc-CCCCeEEEEEcCCCCEEEEE
Q psy9936 80 QGIE----LHC-LKVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGK---IVSDFSA-KKGKLSVMTQNPYNACICLG 150 (315)
Q Consensus 80 ~~~~----~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~---~~~~~~~-~~~~v~~~~~~p~~~~l~~~ 150 (315)
.... ... ..|...|.+++|+|++++|++++.|+.|++||+++++ ....+.. |...|.+++|+|++++|+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~ 164 (377)
T 3dwl_C 85 RPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAG 164 (377)
T ss_dssp ----CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEE
T ss_pred CCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEE
Confidence 5433 333 4567899999999999999999999999999999876 3667777 99999999999999999999
Q ss_pred cCCCeEEEEcCC------------------CCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCC---
Q psy9936 151 HRNGTVTMWSPT------------------VQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGP--- 209 (315)
Q Consensus 151 ~~d~~i~i~d~~------------------~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~--- 209 (315)
+.|+.|++||++ .++++..+ +|...|.+++|+|+|++|++++.|+.|++||+.++ ..
T Consensus 165 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~-~~~~~ 242 (377)
T 3dwl_C 165 CADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAP-EQPPR 242 (377)
T ss_dssp ESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECST-TSCEE
T ss_pred eCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCC-CCcce
Confidence 999999999985 24455566 89999999999999999999999999999999998 65
Q ss_pred -eeEeccCC-CceeEEEccCCeEEE-EcCCEEEecCC
Q psy9936 210 -LNTFRTRT-PINNLAFSQRGLLAT-SRGNIVEFLKP 243 (315)
Q Consensus 210 -~~~~~~~~-~v~~~~~s~~g~~~~-~~~~~i~~~~~ 243 (315)
+..+..|. +|.+++|+|+|.+++ +.++.+..|..
T Consensus 243 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~ 279 (377)
T 3dwl_C 243 ALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQG 279 (377)
T ss_dssp ECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECC
T ss_pred eeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEe
Confidence 66677666 699999999996444 45666667765
No 42
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=5.6e-36 Score=251.60 Aligned_cols=236 Identities=15% Similarity=0.229 Sum_probs=204.1
Q ss_pred eeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCC-CC
Q psy9936 7 LDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQ-GI 82 (315)
Q Consensus 7 ~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~-~~ 82 (315)
+.. ..+|.+++|+|++++|++++.||.|++||+.+++.+..+. |...|.+++|+|++.+|++++ |+.|++||+. +.
T Consensus 61 ~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 140 (312)
T 4ery_A 61 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK 140 (312)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC
T ss_pred hccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCE
Confidence 344 6789999999999999999999999999999999888877 888999999999999998886 8999999995 45
Q ss_pred EEEEee-cCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEec-cCCCCeEEEEEcCCCCEEEEEcCCCeEEEEc
Q psy9936 83 ELHCLK-VLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFS-AKKGKLSVMTQNPYNACICLGHRNGTVTMWS 160 (315)
Q Consensus 83 ~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d 160 (315)
.+..+. |..+|.+++|+|++.+|++++.|+.|++||+.+++.+..+. .+...+..++|+|++++|++++.|+.|++||
T Consensus 141 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd 220 (312)
T 4ery_A 141 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 220 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEE
T ss_pred EEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 555554 55889999999999999999999999999999998877654 4566799999999999999999999999999
Q ss_pred CCCCcceeEeecccccEE---EEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-CceeEEEccCCeEEEE---
Q psy9936 161 PTVQKPLASLLCHKAGIQ---SVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-PINNLAFSQRGLLATS--- 233 (315)
Q Consensus 161 ~~~~~~~~~~~~~~~~i~---~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~g~~~~~--- 233 (315)
+++++.+..+.+|...+. .....+++.+|++|+.||.|++||+.++ ..+..+..|. .|.+++|+|++.++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~-~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~ 299 (312)
T 4ery_A 221 YSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTK-EIVQKLQGHTDVVISTACHPTENIIASAAL 299 (312)
T ss_dssp TTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTC-CEEEEECCCSSCEEEEEECSSSSEEEEEEC
T ss_pred CCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCc-hhhhhhhccCCcEEEEeecCcCCceEEEEc
Confidence 999999988888775432 2233467899999999999999999998 8888888776 6899999999964443
Q ss_pred -cCCEEEecCC
Q psy9936 234 -RGNIVEFLKP 243 (315)
Q Consensus 234 -~~~~i~~~~~ 243 (315)
.|++|++|+.
T Consensus 300 ~~d~~i~~W~~ 310 (312)
T 4ery_A 300 ENDKTIKLWKS 310 (312)
T ss_dssp TTTCCEEEEEC
T ss_pred cCCccEEEecC
Confidence 3899999974
No 43
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5e-37 Score=267.84 Aligned_cols=260 Identities=13% Similarity=0.152 Sum_probs=223.4
Q ss_pred CCcEEEEEEcCCCC-EEEEEcCCCeEEEEEc----cCce------EEEEecC-----------CCceeEEEEeecCcEEE
Q psy9936 10 QFGIYRMNYTKNGR-HLLLGGKRGHVAAFDW----VRKT------LACEMNV-----------MEEVYDIKWLHLETMFA 67 (315)
Q Consensus 10 ~~~v~~~~~s~~~~-~l~~~~~dg~i~v~~~----~~~~------~~~~~~~-----------~~~v~~~~~~~~~~~l~ 67 (315)
..+|.+++|+|+++ +||+++.||.|++|++ .+++ ....+.+ ...|.+++|+|++++|+
T Consensus 45 ~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 124 (425)
T 1r5m_A 45 LDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIV 124 (425)
T ss_dssp CSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEE
T ss_pred cCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEE
Confidence 58999999999999 9999999999999999 8877 3444433 55899999999999998
Q ss_pred EEe-CCeEEEEeCCCCEEEEee-cCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCC-----------
Q psy9936 68 VAQ-KDWVYIYDNQGIELHCLK-VLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGK----------- 134 (315)
Q Consensus 68 ~~~-~~~i~i~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~----------- 134 (315)
+++ ++.|++|+.++..+..+. |...|.+++|+|++.+|++++.|+.|++||+.+++.+..+..+...
T Consensus 125 ~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (425)
T 1r5m_A 125 TGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSG 204 (425)
T ss_dssp EEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC--------------
T ss_pred EEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccC
Confidence 886 889999998777777665 5689999999999999999999999999999999999888877766
Q ss_pred ----eEEEEEcCCCCEEEEEcCCCeEEEEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCe
Q psy9936 135 ----LSVMTQNPYNACICLGHRNGTVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPL 210 (315)
Q Consensus 135 ----v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~ 210 (315)
+.+++|+|++ .+++++.++.|++||+++++.+..+..|...|.+++|+|++++|++++.|+.|++||++++ .++
T Consensus 205 ~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~~ 282 (425)
T 1r5m_A 205 DGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNG-NSQ 282 (425)
T ss_dssp -CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSB-SCS
T ss_pred CcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC-ccc
Confidence 8899999985 5888999999999999999999999999999999999999999999999999999999998 888
Q ss_pred eEeccCC-CceeEEEccCCe-EEEEcCCEEEecCC----------------CceeecccccccccCCcchhhhhhhhhH
Q psy9936 211 NTFRTRT-PINNLAFSQRGL-LATSRGNIVEFLKP----------------PEINFEPRRKANKAGGSVQRAKVKKIVR 271 (315)
Q Consensus 211 ~~~~~~~-~v~~~~~s~~g~-~~~~~~~~i~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (315)
..+..|. .+.+++|+|++. ++++.++.|++|+. ..++|+|++.++++++.++.++.+....
T Consensus 283 ~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~ 361 (425)
T 1r5m_A 283 NCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKK 361 (425)
T ss_dssp EEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHH
T ss_pred eEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCC
Confidence 8887665 699999999995 34456999999986 5788999999999999888777665443
No 44
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-36 Score=257.37 Aligned_cols=232 Identities=17% Similarity=0.202 Sum_probs=186.3
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccC-------ceEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCC
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVR-------KTLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQ 80 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~-------~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~ 80 (315)
..+|.+++|+|++++|++++.|+.|++|++.. .+....+. |...|.+++|+|++++|++++ |+.|++||+.
T Consensus 58 ~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~ 137 (330)
T 2hes_X 58 KKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETD 137 (330)
T ss_dssp CSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECC
T ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEecc
Confidence 56899999999999999999999999999853 34455565 889999999999999999887 8999999983
Q ss_pred -C----CEEEEe-ecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCC--eEEEEeccCCCCeEEEEEcCC--CCEEEEE
Q psy9936 81 -G----IELHCL-KVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIG--KIVSDFSAKKGKLSVMTQNPY--NACICLG 150 (315)
Q Consensus 81 -~----~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~--~~~~~~~~~~~~v~~~~~~p~--~~~l~~~ 150 (315)
. ..+..+ .|...|.+++|+|++.+|++++.|++|++||+.++ +++..+.+|...|.+++|+|+ +.+|++|
T Consensus 138 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~ 217 (330)
T 2hes_X 138 ESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSG 217 (330)
T ss_dssp TTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEE
T ss_pred CCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEE
Confidence 2 123333 46688999999999999999999999999999876 577888999999999999998 6789999
Q ss_pred cCCCeEEEEcCCCC--------cceeEeec-ccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCC--CeeE-eccCC-
Q psy9936 151 HRNGTVTMWSPTVQ--------KPLASLLC-HKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEG--PLNT-FRTRT- 217 (315)
Q Consensus 151 ~~d~~i~i~d~~~~--------~~~~~~~~-~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~--~~~~-~~~~~- 217 (315)
+.|++|++||++++ .+...+.. |...|.+++|+|++ +|++++.||.|++||..++ . ++.. ...|.
T Consensus 218 s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~-~~~~~~~~~~~h~~ 295 (330)
T 2hes_X 218 SDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDG-EWKVFAKRALCHGV 295 (330)
T ss_dssp ETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETT-EEEEEEEESCTTTT
T ss_pred eCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCC-ceEEEecccccccc
Confidence 99999999998754 23444444 88999999999766 7999999999999999875 3 1222 23444
Q ss_pred -CceeEEEcc--CCe--EEEEcCCEEEecCC
Q psy9936 218 -PINNLAFSQ--RGL--LATSRGNIVEFLKP 243 (315)
Q Consensus 218 -~v~~~~~s~--~g~--~~~~~~~~i~~~~~ 243 (315)
.|.+++|+| ++. +.++.|++|++|++
T Consensus 296 ~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~ 326 (330)
T 2hes_X 296 YEINVVKWLELNGKTILATGGDDGIVNFWSL 326 (330)
T ss_dssp SCEEEEEEC-----CCEEEEETTSEEEEEEC
T ss_pred ceEEEEEEecCCCceEEEEecCCCcEEEEEe
Confidence 689999999 564 34456999999985
No 45
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.9e-36 Score=284.21 Aligned_cols=258 Identities=13% Similarity=0.180 Sum_probs=224.4
Q ss_pred EEEeeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCC
Q psy9936 4 QFDLDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQ 80 (315)
Q Consensus 4 ~~~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~ 80 (315)
...+.. .+.|.+++|+|++++|++++.+|.|+|||+.+++....+. |..+|.+++|+|++++|++++ |+.|++||+.
T Consensus 6 ~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~ 85 (814)
T 3mkq_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN 85 (814)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT
T ss_pred ceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 344555 8899999999999999999999999999999999888887 889999999999999998887 7999999984
Q ss_pred -CCEEEEee-cCCceEEEEEcCCCceEEEEcCCCeEEEEEccCC-eEEEEeccCCCCeEEEEEcC-CCCEEEEEcCCCeE
Q psy9936 81 -GIELHCLK-VLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIG-KIVSDFSAKKGKLSVMTQNP-YNACICLGHRNGTV 156 (315)
Q Consensus 81 -~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~-~~~~~~~~~~~~v~~~~~~p-~~~~l~~~~~d~~i 156 (315)
+..+..+. |...|.+++|+|++.+|++++.||.|++||+.++ .....+..|...+.+++|+| +++.|++++.||.|
T Consensus 86 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v 165 (814)
T 3mkq_A 86 TGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTV 165 (814)
T ss_dssp TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEE
T ss_pred CCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeE
Confidence 55555555 6689999999999999999999999999999987 67778889999999999999 88999999999999
Q ss_pred EEEcCCCCcceeEeeccc-ccEEEEEECC--CCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-CceeEEEccCCe--E
Q psy9936 157 TMWSPTVQKPLASLLCHK-AGIQSVAVNH--TGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-PINNLAFSQRGL--L 230 (315)
Q Consensus 157 ~i~d~~~~~~~~~~~~~~-~~i~~~~~sp--~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~g~--~ 230 (315)
++||++++.....+..+. ..+.+++|+| ++.+|++++.||.|++||+.++ .++..+..|. +|.+++|+|+|. +
T Consensus 166 ~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~ 244 (814)
T 3mkq_A 166 KVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK-SCVATLEGHMSNVSFAVFHPTLPIII 244 (814)
T ss_dssp EEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTT-EEEEEEECCSSCEEEEEECSSSSEEE
T ss_pred EEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCC-cEEEEEcCCCCCEEEEEEcCCCCEEE
Confidence 999999988887777555 8899999999 9999999999999999999998 8888888765 699999999994 3
Q ss_pred EEEcCCEEEecCC----------------Cceeecccccc--cccCCcch
Q psy9936 231 ATSRGNIVEFLKP----------------PEINFEPRRKA--NKAGGSVQ 262 (315)
Q Consensus 231 ~~~~~~~i~~~~~----------------~~~~~~~~~~~--~~~~~~~~ 262 (315)
+++.|+.|++|++ ..++|+|++.. ++.+..++
T Consensus 245 ~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 294 (814)
T 3mkq_A 245 SGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG 294 (814)
T ss_dssp EEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTE
T ss_pred EEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCC
Confidence 3445899999987 46788999874 55544433
No 46
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.5e-38 Score=273.67 Aligned_cols=261 Identities=16% Similarity=0.248 Sum_probs=221.3
Q ss_pred CCcEEEEEEcCCCC-EEEEE----------cCCCeEEEEEccCce---EEEEecCCCceeEEEEeecCcEEEEEe-CCeE
Q psy9936 10 QFGIYRMNYTKNGR-HLLLG----------GKRGHVAAFDWVRKT---LACEMNVMEEVYDIKWLHLETMFAVAQ-KDWV 74 (315)
Q Consensus 10 ~~~v~~~~~s~~~~-~l~~~----------~~dg~i~v~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i 74 (315)
...|.+++|+|+++ +|+++ +.|+.|++|++.++. ....+.|...|.+++|+|++.+|++++ |+.|
T Consensus 12 ~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v 91 (416)
T 2pm9_A 12 FSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSL 91 (416)
T ss_dssp EEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCE
T ss_pred hhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeE
Confidence 45788999999997 99999 889999999998875 455566888999999999999998886 8999
Q ss_pred EEEeCCC-----CEEEEee-cCCceEEEEEcCC-CceEEEEcCCCeEEEEEccCCe------EEEE---eccCCCCeEEE
Q psy9936 75 YIYDNQG-----IELHCLK-VLNKVTRMEFLPY-HFLLATASEEGYLSWLDTSIGK------IVSD---FSAKKGKLSVM 138 (315)
Q Consensus 75 ~i~~~~~-----~~~~~~~-~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~------~~~~---~~~~~~~v~~~ 138 (315)
++|++.. ..+..+. |...|.+++|+|+ +.+|++++.|+.|++||+.+++ .... +..|...+.++
T Consensus 92 ~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 171 (416)
T 2pm9_A 92 ELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISL 171 (416)
T ss_dssp EEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEE
T ss_pred EEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEE
Confidence 9999965 3444443 6689999999998 8999999999999999998876 3322 35688899999
Q ss_pred EEcCC-CCEEEEEcCCCeEEEEcCCCCcceeEeecc------cccEEEEEECCCC-CEEEEeeCCC---cEEEEEccCCC
Q psy9936 139 TQNPY-NACICLGHRNGTVTMWSPTVQKPLASLLCH------KAGIQSVAVNHTG-TYMATSAGDS---QLRIWDVRNLE 207 (315)
Q Consensus 139 ~~~p~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~------~~~i~~~~~sp~g-~~l~~~~~d~---~i~iwd~~~~~ 207 (315)
+|+|+ +.+|++++.|+.|++||+++++.+..+..| ...|.+++|+|++ .+|++++.|+ .|++||++++.
T Consensus 172 ~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~ 251 (416)
T 2pm9_A 172 AWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN 251 (416)
T ss_dssp EECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT
T ss_pred EeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC
Confidence 99999 789999999999999999999988888766 7899999999997 6999999998 99999999864
Q ss_pred CCeeEec-cCC-CceeEEEcc-CCe--EEEEcCCEEEecCC----------------Cceeecccc-cccccCCcchhhh
Q psy9936 208 GPLNTFR-TRT-PINNLAFSQ-RGL--LATSRGNIVEFLKP----------------PEINFEPRR-KANKAGGSVQRAK 265 (315)
Q Consensus 208 ~~~~~~~-~~~-~v~~~~~s~-~g~--~~~~~~~~i~~~~~----------------~~~~~~~~~-~~~~~~~~~~~~~ 265 (315)
.++..+. .|. .|.+++|+| ++. +.++.|+.|++|++ .+++|+|++ .++++++.++.++
T Consensus 252 ~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~ 331 (416)
T 2pm9_A 252 TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIE 331 (416)
T ss_dssp SCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEE
T ss_pred CCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEE
Confidence 6677776 554 799999999 774 34456899999986 689999998 8999999998777
Q ss_pred hhhhh
Q psy9936 266 VKKIV 270 (315)
Q Consensus 266 ~~~~~ 270 (315)
.+...
T Consensus 332 iw~~~ 336 (416)
T 2pm9_A 332 VQTLQ 336 (416)
T ss_dssp EEESC
T ss_pred EEEcc
Confidence 66543
No 47
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.8e-37 Score=261.41 Aligned_cols=259 Identities=17% Similarity=0.175 Sum_probs=223.2
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccC-ceEEEEecCCCceeEEEEeecCcEEEEEeCCeEEEEeCCCC----EE
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVR-KTLACEMNVMEEVYDIKWLHLETMFAVAQKDWVYIYDNQGI----EL 84 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~~~~----~~ 84 (315)
..+|.+++|+|||++++++..++.+.+|.... ......+.|...|.+++|+|++++|++++++.|++|++... .+
T Consensus 9 ~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~ 88 (337)
T 1gxr_A 9 SKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPV 88 (337)
T ss_dssp EEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCS
T ss_pred CCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcCCCeEEEEECCCCCceeee
Confidence 56889999999999999888777776665444 34455566999999999999999999999999999998532 12
Q ss_pred EEe---ecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCe--EEEEeccCCCCeEEEEEcCCCCEEEEEcCCCeEEEE
Q psy9936 85 HCL---KVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGK--IVSDFSAKKGKLSVMTQNPYNACICLGHRNGTVTMW 159 (315)
Q Consensus 85 ~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~--~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~ 159 (315)
..+ .+...|.+++|+|++++|++++.|+.|++||+.+++ ....+..|...+.+++|+|++++|++++.|+.|++|
T Consensus 89 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~ 168 (337)
T 1gxr_A 89 SQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 168 (337)
T ss_dssp EEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred ecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEE
Confidence 222 466899999999999999999999999999999876 566778899999999999999999999999999999
Q ss_pred cCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCCCceeEEEccCCe--EEEEcCCE
Q psy9936 160 SPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRTPINNLAFSQRGL--LATSRGNI 237 (315)
Q Consensus 160 d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~--~~~~~~~~ 237 (315)
|+++++.+..+..|...+.+++|+|++++|++++.|+.|++||++++ +++..+....++.+++|+|++. ++++.++.
T Consensus 169 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~ 247 (337)
T 1gxr_A 169 DLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG-RQLQQHDFTSQIFSLGYCPTGEWLAVGMESSN 247 (337)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT-EEEEEEECSSCEEEEEECTTSSEEEEEETTSC
T ss_pred eCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCC-ceEeeecCCCceEEEEECCCCCEEEEEcCCCc
Confidence 99999999999999999999999999999999999999999999998 8888887777899999999995 33445899
Q ss_pred EEecCC---------------CceeecccccccccCCcchhhhhhhh
Q psy9936 238 VEFLKP---------------PEINFEPRRKANKAGGSVQRAKVKKI 269 (315)
Q Consensus 238 i~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (315)
|++|+. ..++|+|+++++++++.++.++.+..
T Consensus 248 i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~ 294 (337)
T 1gxr_A 248 VEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRT 294 (337)
T ss_dssp EEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred EEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEEC
Confidence 998876 57899999999999998887666643
No 48
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=9.7e-37 Score=260.99 Aligned_cols=256 Identities=12% Similarity=0.146 Sum_probs=213.8
Q ss_pred CCcEEEEEEcCC----CCEEEEEcCCCeEEEEEccCceEEEEec------CCCceeEEEEeec----CcEEEEEe-CCeE
Q psy9936 10 QFGIYRMNYTKN----GRHLLLGGKRGHVAAFDWVRKTLACEMN------VMEEVYDIKWLHL----ETMFAVAQ-KDWV 74 (315)
Q Consensus 10 ~~~v~~~~~s~~----~~~l~~~~~dg~i~v~~~~~~~~~~~~~------~~~~v~~~~~~~~----~~~l~~~~-~~~i 74 (315)
..+|++++|+|+ ...+++++.++.|++|++.+++.+..+. +...|.+++|+|+ +.+|++++ |+.|
T Consensus 18 ~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i 97 (366)
T 3k26_A 18 NQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGII 97 (366)
T ss_dssp CSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEE
T ss_pred CCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEE
Confidence 789999999984 4456666667799999999777655544 4578999999998 66888776 8999
Q ss_pred EEEeCC-CCEEEEee-cCCceEEEEEcC-CCceEEEEcCCCeEEEEEccCCeEEEEe---ccCCCCeEEEEEcCCCCEEE
Q psy9936 75 YIYDNQ-GIELHCLK-VLNKVTRMEFLP-YHFLLATASEEGYLSWLDTSIGKIVSDF---SAKKGKLSVMTQNPYNACIC 148 (315)
Q Consensus 75 ~i~~~~-~~~~~~~~-~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~---~~~~~~v~~~~~~p~~~~l~ 148 (315)
++||+. +..+..+. |...|.+++|+| ++.+|++++.||.|++||+.+++.+..+ ..|...|.+++|+|++++|+
T Consensus 98 ~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 177 (366)
T 3k26_A 98 RIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIM 177 (366)
T ss_dssp EEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEE
T ss_pred EEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEE
Confidence 999985 55555555 678999999999 8999999999999999999999988888 68999999999999999999
Q ss_pred EEcCCCeEEEEcCCCCcceeEeec----------------------------ccccEEEEEECCCCCEEEEeeCCCcEEE
Q psy9936 149 LGHRNGTVTMWSPTVQKPLASLLC----------------------------HKAGIQSVAVNHTGTYMATSAGDSQLRI 200 (315)
Q Consensus 149 ~~~~d~~i~i~d~~~~~~~~~~~~----------------------------~~~~i~~~~~sp~g~~l~~~~~d~~i~i 200 (315)
+++.|+.|++||+++++.+..+.. |...|.+++|+ +.+|++++.|+.|++
T Consensus 178 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~ 255 (366)
T 3k26_A 178 SCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVC 255 (366)
T ss_dssp EEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEE
T ss_pred EecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEE
Confidence 999999999999998765544433 89999999998 779999999999999
Q ss_pred EEccCCCCC--------------eeEeccCC-CceeEEEccC--CeEEE--EcCCEEEecCC------------------
Q psy9936 201 WDVRNLEGP--------------LNTFRTRT-PINNLAFSQR--GLLAT--SRGNIVEFLKP------------------ 243 (315)
Q Consensus 201 wd~~~~~~~--------------~~~~~~~~-~v~~~~~s~~--g~~~~--~~~~~i~~~~~------------------ 243 (315)
||+.+. .. +..+..|. .|++++|+|+ +.+++ +.|+.|++|+.
T Consensus 256 wd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 334 (366)
T 3k26_A 256 WKPGKM-EDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKC 334 (366)
T ss_dssp EEESST-TCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTC
T ss_pred EeCCCc-cccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEccccc
Confidence 999886 33 45555555 6999999999 85443 45899998876
Q ss_pred ----CceeecccccccccCCcchhhhhhh
Q psy9936 244 ----PEINFEPRRKANKAGGSVQRAKVKK 268 (315)
Q Consensus 244 ----~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (315)
..++|+|+++++++++.++.++.+.
T Consensus 335 ~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 363 (366)
T 3k26_A 335 GAAIRQTSFSRDSSILIAVCDDASIWRWD 363 (366)
T ss_dssp CSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CCceEEEEeCCCCCeEEEEeCCCEEEEEE
Confidence 3578999999999999988776553
No 49
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.1e-36 Score=264.18 Aligned_cols=249 Identities=16% Similarity=0.229 Sum_probs=205.3
Q ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCC-CCEEEEe
Q psy9936 11 FGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQ-GIELHCL 87 (315)
Q Consensus 11 ~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~-~~~~~~~ 87 (315)
..+....|+|++++|++++.||.|++||+.+++....+. |...|.+++|+|++++|++++ |+.|++||+. +..+..+
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 177 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTL 177 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEE
T ss_pred CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEE
Confidence 344555789999999999999999999999999888875 899999999999999998887 8999999994 4444444
Q ss_pred e-cCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEecc---CCCCeEE---------------------EEEcC
Q psy9936 88 K-VLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSA---KKGKLSV---------------------MTQNP 142 (315)
Q Consensus 88 ~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~---~~~~v~~---------------------~~~~p 142 (315)
. |...|.+++|+|++.+|++++.|+.|++||+++++.+..+.. +...+.+ ++|+|
T Consensus 178 ~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 257 (420)
T 3vl1_A 178 IGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT 257 (420)
T ss_dssp ECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC
Confidence 4 668999999999999999999999999999999998888864 3334444 45578
Q ss_pred CCCEEEEEcCCCeEEEEcCCCCcceeEee-cccccEEEEEECCCCC-EEEEeeCCCcEEEEEccCCCCCeeEeccC-C-C
Q psy9936 143 YNACICLGHRNGTVTMWSPTVQKPLASLL-CHKAGIQSVAVNHTGT-YMATSAGDSQLRIWDVRNLEGPLNTFRTR-T-P 218 (315)
Q Consensus 143 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~i~~~~~sp~g~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~-~ 218 (315)
++++|++|+.||.|++||+++++.+..+. .|...|.+++|+|++. +|++|+.||.|++||++++..++..+..+ . +
T Consensus 258 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 337 (420)
T 3vl1_A 258 YGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTP 337 (420)
T ss_dssp TTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSC
T ss_pred CCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCC
Confidence 99999999999999999999988777765 5788999999999999 99999999999999999874557777653 3 5
Q ss_pred ceeEEEccCCe-EEE-EcCCEEEecCC-------------------------Cceeeccccc----ccccCCc
Q psy9936 219 INNLAFSQRGL-LAT-SRGNIVEFLKP-------------------------PEINFEPRRK----ANKAGGS 260 (315)
Q Consensus 219 v~~~~~s~~g~-~~~-~~~~~i~~~~~-------------------------~~~~~~~~~~----~~~~~~~ 260 (315)
+..+.| |++. +++ +.|+.|++|++ ..++|+|++. .++.|+.
T Consensus 338 v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~ 409 (420)
T 3vl1_A 338 INNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKN 409 (420)
T ss_dssp EEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETT
T ss_pred ceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCC
Confidence 777755 4563 333 35899999974 4578999988 4554443
No 50
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=7.6e-37 Score=264.97 Aligned_cols=255 Identities=11% Similarity=0.114 Sum_probs=214.7
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCce------EEEEec-CCCceeEEEEeec----C---cEEEEEe-CCeE
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKT------LACEMN-VMEEVYDIKWLHL----E---TMFAVAQ-KDWV 74 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~------~~~~~~-~~~~v~~~~~~~~----~---~~l~~~~-~~~i 74 (315)
..+|++++|+| ++|++++.||.|++|++.+++ ....+. |...|.+++|+|+ + .+|++++ |+.|
T Consensus 16 ~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i 93 (397)
T 1sq9_A 16 DADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDL 93 (397)
T ss_dssp SSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCE
T ss_pred hcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCE
Confidence 78999999999 799999999999999999887 444444 8899999999999 8 8888876 8999
Q ss_pred EEEeCCCCE------EEEee-c-----CCceEEEEEc----CCCce-EEEEcCCCeEEEEEccC------CeEEE-----
Q psy9936 75 YIYDNQGIE------LHCLK-V-----LNKVTRMEFL----PYHFL-LATASEEGYLSWLDTSI------GKIVS----- 126 (315)
Q Consensus 75 ~i~~~~~~~------~~~~~-~-----~~~v~~~~~~----~~~~~-l~~~~~d~~i~~~d~~~------~~~~~----- 126 (315)
++|++.... +..+. + ...|.+++|+ |++.+ |++++.||.|++||+.+ ++.+.
T Consensus 94 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 173 (397)
T 1sq9_A 94 LFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTL 173 (397)
T ss_dssp EEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEE
T ss_pred EEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcc
Confidence 999984332 45554 3 3889999999 99999 99999999999999998 65555
Q ss_pred Ee-------ccCCCCeEEEEEcCCCCEEEEEcCCCeEEEEcCCCCcceeEeec---c---cccEEEEEECCCCCEEEEee
Q psy9936 127 DF-------SAKKGKLSVMTQNPYNACICLGHRNGTVTMWSPTVQKPLASLLC---H---KAGIQSVAVNHTGTYMATSA 193 (315)
Q Consensus 127 ~~-------~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~---~~~i~~~~~sp~g~~l~~~~ 193 (315)
.+ ..|...+.+++|+|++ +|++++.|+.|++||+++++++..+.. | ...|.+++|+|++.+|++++
T Consensus 174 ~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~ 252 (397)
T 1sq9_A 174 ELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAH 252 (397)
T ss_dssp EEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEE
T ss_pred eeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEe
Confidence 66 4478889999999999 999999999999999999999999998 8 99999999999999999999
Q ss_pred CC---CcEEEEEccCCCCCeeEecc-------------CC-CceeEEEccCCeE--EEEcCCEEEecCC-----------
Q psy9936 194 GD---SQLRIWDVRNLEGPLNTFRT-------------RT-PINNLAFSQRGLL--ATSRGNIVEFLKP----------- 243 (315)
Q Consensus 194 ~d---~~i~iwd~~~~~~~~~~~~~-------------~~-~v~~~~~s~~g~~--~~~~~~~i~~~~~----------- 243 (315)
.| +.|++||++++ +++..+.. |. .|.+++|+|++.+ +++.|+.|++|+.
T Consensus 253 ~d~~~g~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 331 (397)
T 1sq9_A 253 DSNSFGCITLYETEFG-ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNM 331 (397)
T ss_dssp EETTEEEEEEEETTTC-CEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred cCCCCceEEEEECCCC-cccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEec
Confidence 99 99999999998 88888876 55 6999999999953 3445899998865
Q ss_pred --------------------------Cceeecccc----------cccccCCcchhhhhhh
Q psy9936 244 --------------------------PEINFEPRR----------KANKAGGSVQRAKVKK 268 (315)
Q Consensus 244 --------------------------~~~~~~~~~----------~~~~~~~~~~~~~~~~ 268 (315)
..++|+|++ .++++++.++.++.+.
T Consensus 332 ~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~ 392 (397)
T 1sq9_A 332 HCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFR 392 (397)
T ss_dssp CGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEE
T ss_pred ccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEE
Confidence 246788988 6888888887766543
No 51
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.9e-37 Score=265.86 Aligned_cols=238 Identities=13% Similarity=0.183 Sum_probs=197.1
Q ss_pred EEeeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCce-------EEEEec-CCCceeEEEEeec-CcEEEEEe-CCe
Q psy9936 5 FDLDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKT-------LACEMN-VMEEVYDIKWLHL-ETMFAVAQ-KDW 73 (315)
Q Consensus 5 ~~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~-------~~~~~~-~~~~v~~~~~~~~-~~~l~~~~-~~~ 73 (315)
..+.. ...|.+++|+|+|++|++|+.|+.+++|++.+.. ....+. |.+.+.++.|+|+ +..|++++ |++
T Consensus 102 ~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~ 181 (380)
T 3iz6_a 102 HAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQT 181 (380)
T ss_dssp EEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSC
T ss_pred eEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCc
Confidence 34555 6779999999999999999999999999986532 122333 7888999999996 44566655 899
Q ss_pred EEEEeCC-CCEEEEe------ecCCceEEEEEcC-CCceEEEEcCCCeEEEEEcc-CCeEEEEeccCCCCeEEEEEcCCC
Q psy9936 74 VYIYDNQ-GIELHCL------KVLNKVTRMEFLP-YHFLLATASEEGYLSWLDTS-IGKIVSDFSAKKGKLSVMTQNPYN 144 (315)
Q Consensus 74 i~i~~~~-~~~~~~~------~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~-~~~~~~~~~~~~~~v~~~~~~p~~ 144 (315)
|++||+. +..+..+ .|...|.+++|+| ++.+|++|+.|++|++||++ .+..+..+.+|.+.|.+++|+|++
T Consensus 182 i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~ 261 (380)
T 3iz6_a 182 CVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDG 261 (380)
T ss_dssp EEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTS
T ss_pred EEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCC
Confidence 9999995 4444443 2557899999987 78999999999999999998 457788889999999999999999
Q ss_pred CEEEEEcCCCeEEEEcCCCCcceeEeeccc-------ccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEe----
Q psy9936 145 ACICLGHRNGTVTMWSPTVQKPLASLLCHK-------AGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTF---- 213 (315)
Q Consensus 145 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~---- 213 (315)
++|++|+.|++|++||+++++++..+..+. ..|++++|+|+|++|++|+.||.|++||+..+ +.+..+
T Consensus 262 ~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~-~~~~~~~~~~ 340 (380)
T 3iz6_a 262 QRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLA-EMVLNLGTLQ 340 (380)
T ss_dssp SEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTC-CEEEEECCSC
T ss_pred CeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCC-ceEEEEeccc
Confidence 999999999999999999998887776443 24889999999999999999999999999887 666665
Q ss_pred ccCC-CceeEEEccCCeEEE--EcCCEEEecCC
Q psy9936 214 RTRT-PINNLAFSQRGLLAT--SRGNIVEFLKP 243 (315)
Q Consensus 214 ~~~~-~v~~~~~s~~g~~~~--~~~~~i~~~~~ 243 (315)
..|. .|++++|+|+|.+++ +.|++|++|+.
T Consensus 341 ~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~ 373 (380)
T 3iz6_a 341 NSHEGRISCLGLSSDGSALCTGSWDKNLKIWAF 373 (380)
T ss_dssp SSCCCCCCEEEECSSSSEEEEECTTSCEEEEEC
T ss_pred CCCCCceEEEEECCCCCEEEEeeCCCCEEEEec
Confidence 3454 699999999996444 45899999984
No 52
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.3e-36 Score=262.89 Aligned_cols=254 Identities=15% Similarity=0.228 Sum_probs=218.1
Q ss_pred EEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec--CCCceeEEEEeecCcEEEEEe-CCeEEEEeCC-CCEEEEe-
Q psy9936 13 IYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN--VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQ-GIELHCL- 87 (315)
Q Consensus 13 v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~-~~~~~~~- 87 (315)
+.+++|++ ..+++++.||.|++|++.+++....+. |...|.+++|+|++.+|++++ ||.|++||+. +..+..+
T Consensus 96 ~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 173 (401)
T 4aez_A 96 LNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMA 173 (401)
T ss_dssp CBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred EEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEec
Confidence 44566765 457778899999999999998877665 678899999999999999887 8999999995 4455554
Q ss_pred ecCCceEEEEEcCCCceEEEEcCCCeEEEEEcc-CCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCeEEEEcCCCCcc
Q psy9936 88 KVLNKVTRMEFLPYHFLLATASEEGYLSWLDTS-IGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNGTVTMWSPTVQKP 166 (315)
Q Consensus 88 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~-~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~ 166 (315)
.|...|.+++|+ +.+|++++.||.|++||++ .+..+..+..|.+.|.+++|+|++++|++|+.|+.|++||++++++
T Consensus 174 ~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 251 (401)
T 4aez_A 174 GHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIP 251 (401)
T ss_dssp CCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSE
T ss_pred CCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCc
Confidence 466899999994 5799999999999999998 4667788889999999999999999999999999999999999999
Q ss_pred eeEeecccccEEEEEECCCCC-EEEEee--CCCcEEEEEccCCCCCeeEeccCCCceeEEEccCCeEEEE----cCCEEE
Q psy9936 167 LASLLCHKAGIQSVAVNHTGT-YMATSA--GDSQLRIWDVRNLEGPLNTFRTRTPINNLAFSQRGLLATS----RGNIVE 239 (315)
Q Consensus 167 ~~~~~~~~~~i~~~~~sp~g~-~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~~~~----~~~~i~ 239 (315)
+..+..|...|.+++|+|++. ++++++ .|+.|++||+.++ .++..+..+..+.+++|+|++.++++ .++.|+
T Consensus 252 ~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~ 330 (401)
T 4aez_A 252 KFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATG-ARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLS 330 (401)
T ss_dssp EEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTC-CEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEE
T ss_pred cEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCC-CEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEE
Confidence 999999999999999999765 666654 7999999999998 88888888888999999999954433 489999
Q ss_pred ecCC------------------CceeecccccccccCCcchhhhhhhhhH
Q psy9936 240 FLKP------------------PEINFEPRRKANKAGGSVQRAKVKKIVR 271 (315)
Q Consensus 240 ~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (315)
+|+. .+++|+|++.++++++.++.++.+....
T Consensus 331 v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~ 380 (401)
T 4aez_A 331 IWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYD 380 (401)
T ss_dssp EEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC
T ss_pred EEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 8865 6789999999999999999887776543
No 53
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-35 Score=249.32 Aligned_cols=257 Identities=10% Similarity=0.085 Sum_probs=219.7
Q ss_pred EEEeeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCC
Q psy9936 4 QFDLDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQ 80 (315)
Q Consensus 4 ~~~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~ 80 (315)
...+.. ...|.+++| |++++|++++.||.|++||+.+++....+. |...|.+++|+|++.+|++++ |+.|++|++.
T Consensus 11 ~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~ 89 (313)
T 3odt_A 11 SATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLF 89 (313)
T ss_dssp EEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred HHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEee
Confidence 345566 789999999 999999999999999999999988777766 889999999999999998886 8999999983
Q ss_pred C----CEEEE-eecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcC-CCCEEEEEcCCC
Q psy9936 81 G----IELHC-LKVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNP-YNACICLGHRNG 154 (315)
Q Consensus 81 ~----~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p-~~~~l~~~~~d~ 154 (315)
. ..+.. ..|...|.+++| ++.++++++.|+.|++|| .++....+..|...+.+++|+| +++++++++.|+
T Consensus 90 ~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 165 (313)
T 3odt_A 90 ATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADK 165 (313)
T ss_dssp CCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTS
T ss_pred ecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCC
Confidence 2 22333 346689999999 577999999999999999 6788888889999999999988 899999999999
Q ss_pred eEEEEcCCCCcceeEeec-ccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-CceeEEEccCCe-EE
Q psy9936 155 TVTMWSPTVQKPLASLLC-HKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-PINNLAFSQRGL-LA 231 (315)
Q Consensus 155 ~i~i~d~~~~~~~~~~~~-~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~g~-~~ 231 (315)
.|++|| ..+.+..+.. |...+.+++|+|++. +++++.|+.|++||++++ +++..+..|. +|++++|+|++. ++
T Consensus 166 ~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~l~~ 241 (313)
T 3odt_A 166 TIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTG-DVLRTYEGHESFVYCIKLLPNGDIVS 241 (313)
T ss_dssp CEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTC-CEEEEEECCSSCEEEEEECTTSCEEE
T ss_pred CEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCch-hhhhhhhcCCceEEEEEEecCCCEEE
Confidence 999999 4456667776 889999999999998 999999999999999998 8888888765 699999999996 44
Q ss_pred EEcCCEEEecCC----------------CceeecccccccccCCcchhhhhhhhh
Q psy9936 232 TSRGNIVEFLKP----------------PEINFEPRRKANKAGGSVQRAKVKKIV 270 (315)
Q Consensus 232 ~~~~~~i~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (315)
++.|+.|++|+. ..++|+|+++++ +++.++.++.+...
T Consensus 242 ~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~dg~i~iw~~~ 295 (313)
T 3odt_A 242 CGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDII-VGSSDNLVRIFSQE 295 (313)
T ss_dssp EETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEE-EEETTSCEEEEESC
T ss_pred EecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCEE-EEeCCCcEEEEeCC
Confidence 556999999987 578899999855 67777777766543
No 54
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-36 Score=267.17 Aligned_cols=237 Identities=15% Similarity=0.186 Sum_probs=196.5
Q ss_pred EEe-eC-CCcEEEEEEcC-CCCEEEEEcCCCeEEEEEccC---ce---EEEEecCCCceeEEEEeecCcEEEEEe-CCeE
Q psy9936 5 FDL-DL-QFGIYRMNYTK-NGRHLLLGGKRGHVAAFDWVR---KT---LACEMNVMEEVYDIKWLHLETMFAVAQ-KDWV 74 (315)
Q Consensus 5 ~~~-~~-~~~v~~~~~s~-~~~~l~~~~~dg~i~v~~~~~---~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i 74 (315)
..+ .. .+.|++++|+| ++++|++|+.||.|+|||+.+ +. ....+.|...|.+++|+|++.+|++++ |+.|
T Consensus 56 ~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i 135 (437)
T 3gre_A 56 ATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQI 135 (437)
T ss_dssp EEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred eeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEE
Confidence 445 44 68999999999 999999999999999999876 33 344556899999999999999888877 8999
Q ss_pred EEEeCC----CCEEEEee-------------cCCceEEEE--EcCCCceEEEEcCCCeEEEEEccCCeEEEEecc--CCC
Q psy9936 75 YIYDNQ----GIELHCLK-------------VLNKVTRME--FLPYHFLLATASEEGYLSWLDTSIGKIVSDFSA--KKG 133 (315)
Q Consensus 75 ~i~~~~----~~~~~~~~-------------~~~~v~~~~--~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~--~~~ 133 (315)
++||+. +....... +...+.++. +++++.+|++++.|+.|++||+++++.+..+.. |..
T Consensus 136 ~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~ 215 (437)
T 3gre_A 136 IVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHG 215 (437)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGC
T ss_pred EEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCC
Confidence 999983 33332221 335566666 567899999999999999999999999999987 889
Q ss_pred CeEEEEEcCCCCEEEEEcCCCeEEEEcCCCCcceeEee-cccccEEEEEECC----CCCEEEEeeCCCcEEEEEccCCCC
Q psy9936 134 KLSVMTQNPYNACICLGHRNGTVTMWSPTVQKPLASLL-CHKAGIQSVAVNH----TGTYMATSAGDSQLRIWDVRNLEG 208 (315)
Q Consensus 134 ~v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~i~~~~~sp----~g~~l~~~~~d~~i~iwd~~~~~~ 208 (315)
.|++++|+|++++|++|+.||.|++||+++++++..+. .|..+|.+++|+| ++.+|++|+.|+.|++||++++ .
T Consensus 216 ~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~-~ 294 (437)
T 3gre_A 216 AVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKG-H 294 (437)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTT-E
T ss_pred ceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCC-c
Confidence 99999999999999999999999999999999988886 7888999996664 5779999999999999999987 6
Q ss_pred CeeEeccC---------------------------CCceeEEEccCC-eEEE-EcCCEEEecCC
Q psy9936 209 PLNTFRTR---------------------------TPINNLAFSQRG-LLAT-SRGNIVEFLKP 243 (315)
Q Consensus 209 ~~~~~~~~---------------------------~~v~~~~~s~~g-~~~~-~~~~~i~~~~~ 243 (315)
++..+..+ ..|++++|+ ++ .+++ +.|+.|++|+.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~ 357 (437)
T 3gre_A 295 CQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSL 357 (437)
T ss_dssp EEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEET
T ss_pred EEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEEC
Confidence 66665532 147889999 55 3443 34999999986
No 55
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.2e-35 Score=275.67 Aligned_cols=234 Identities=15% Similarity=0.219 Sum_probs=202.3
Q ss_pred eeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCCCCE
Q psy9936 7 LDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGIE 83 (315)
Q Consensus 7 ~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~~ 83 (315)
+.. ...|.+++|+|++++|++|+.||.|+|||+.+++....+. |...|.+++|+|++++|++++ |++|++||..+..
T Consensus 426 ~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~ 505 (694)
T 3dm0_A 426 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGEC 505 (694)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCE
T ss_pred ecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCc
Confidence 444 6789999999999999999999999999999999888776 899999999999999888876 8999999997665
Q ss_pred EEEe-----ecCCceEEEEEcCCC--ceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCeE
Q psy9936 84 LHCL-----KVLNKVTRMEFLPYH--FLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNGTV 156 (315)
Q Consensus 84 ~~~~-----~~~~~v~~~~~~~~~--~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i 156 (315)
...+ .|...|.+++|+|++ ..+++++.|++|++||+.+++....+.+|.+.|++++|+|++++|++|+.|+.|
T Consensus 506 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i 585 (694)
T 3dm0_A 506 KYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVV 585 (694)
T ss_dssp EEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBC
T ss_pred ceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeE
Confidence 4443 255779999999986 589999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-------------------
Q psy9936 157 TMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT------------------- 217 (315)
Q Consensus 157 ~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~------------------- 217 (315)
++||+++++.+..+. +...|.+++|+|++.+|++++ ++.|++||++++ ..+..+..+.
T Consensus 586 ~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (694)
T 3dm0_A 586 LLWDLAEGKKLYSLE-ANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESK-SIVEDLKVDLKAEAEKADNSGPAATKRKV 662 (694)
T ss_dssp EEEETTTTEEEECCB-CSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTT-EEEEEECCCCC----------------CC
T ss_pred EEEECCCCceEEEec-CCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCC-CChhhhccccccccccccccccccCCcee
Confidence 999999998888776 457899999999999887776 456999999987 6666554221
Q ss_pred -CceeEEEccCCeEE--EEcCCEEEecCC
Q psy9936 218 -PINNLAFSQRGLLA--TSRGNIVEFLKP 243 (315)
Q Consensus 218 -~v~~~~~s~~g~~~--~~~~~~i~~~~~ 243 (315)
.+++++|+|+|.++ ++.|+.|++|++
T Consensus 663 ~~~~~l~~spdg~~l~sgs~Dg~i~iW~i 691 (694)
T 3dm0_A 663 IYCTSLNWSADGSTLFSGYTDGVIRVWGI 691 (694)
T ss_dssp CCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred EEeeeEEEcCCCCEEEEEcCCCeEEEEec
Confidence 25789999999544 446999999985
No 56
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.5e-37 Score=271.51 Aligned_cols=256 Identities=12% Similarity=0.113 Sum_probs=213.1
Q ss_pred EEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEe-CCeEEEEeCCCCEEEEe--ec
Q psy9936 13 IYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGIELHCL--KV 89 (315)
Q Consensus 13 v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~~~~~~--~~ 89 (315)
+++++|+|++++|++++.||.|++||+.+++....+.....+....|+|++++|++++ |+.|++||+........ .|
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h 138 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAH 138 (420)
T ss_dssp CTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSS
T ss_pred ccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccc
Confidence 4478999999999999999999999998887665555444455567899999998886 89999999976554443 56
Q ss_pred CCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCeEEEEcCCCCcceeE
Q psy9936 90 LNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNGTVTMWSPTVQKPLAS 169 (315)
Q Consensus 90 ~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~~~~ 169 (315)
...|.+++|+|++.+|++++.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+++++.+..
T Consensus 139 ~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~ 218 (420)
T 3vl1_A 139 VSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHT 218 (420)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred cCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEE
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred eec---ccccEEE---------------------EEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEecc-C-CCceeEE
Q psy9936 170 LLC---HKAGIQS---------------------VAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRT-R-TPINNLA 223 (315)
Q Consensus 170 ~~~---~~~~i~~---------------------~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~-~~v~~~~ 223 (315)
+.. |...+.+ ++|+|++++|++++.||.|++||++++ ..+..+.. | ..+.+++
T Consensus 219 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~~v~~~~ 297 (420)
T 3vl1_A 219 FNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSK-EQTIQLPSKFTCSCNSLT 297 (420)
T ss_dssp ECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTC-CEEEEECCTTSSCEEEEE
T ss_pred eecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCC-ceeEEcccccCCCceeEE
Confidence 874 3344444 455789999999999999999999998 66666543 3 3699999
Q ss_pred EccCCe-E--EEEcCCEEEecCC------------------CceeecccccccccCCcchhhhhhhhh
Q psy9936 224 FSQRGL-L--ATSRGNIVEFLKP------------------PEINFEPRRKANKAGGSVQRAKVKKIV 270 (315)
Q Consensus 224 ~s~~g~-~--~~~~~~~i~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (315)
|+|++. + +++.|+.|++|+. ..+ +.|++.++++++.++.++.+...
T Consensus 298 ~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~s~~~d~~v~iw~~~ 364 (420)
T 3vl1_A 298 VDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNV-YFAAGALFVSSGFDTSIKLDIIS 364 (420)
T ss_dssp ECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEE-EEETTEEEEEETTTEEEEEEEEC
T ss_pred EeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEE-EeCCCCEEEEecCCccEEEEecc
Confidence 999984 3 3345899999977 223 45678899999999887777543
No 57
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-35 Score=253.41 Aligned_cols=237 Identities=18% Similarity=0.217 Sum_probs=198.3
Q ss_pred eeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEcc--CceEEEEec-CCCceeEEEEeec--CcEEEEEe-CCeEEEEeC
Q psy9936 7 LDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWV--RKTLACEMN-VMEEVYDIKWLHL--ETMFAVAQ-KDWVYIYDN 79 (315)
Q Consensus 7 ~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~--~~~~~~~~~-~~~~v~~~~~~~~--~~~l~~~~-~~~i~i~~~ 79 (315)
+.. ..+|++++|+|++++|++++.||.|++|++. +++....+. |...|.+++|+|+ +.+|++++ |+.|++||+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~ 86 (379)
T 3jrp_A 7 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKE 86 (379)
T ss_dssp EEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEE
T ss_pred ecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEc
Confidence 444 7899999999999999999999999999998 556666666 8899999999987 88888876 899999999
Q ss_pred CCCE---EEEe-ecCCceEEEEEcCC--CceEEEEcCCCeEEEEEccCC--eEEEEeccCCCCeEEEEEcC---------
Q psy9936 80 QGIE---LHCL-KVLNKVTRMEFLPY--HFLLATASEEGYLSWLDTSIG--KIVSDFSAKKGKLSVMTQNP--------- 142 (315)
Q Consensus 80 ~~~~---~~~~-~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~--~~~~~~~~~~~~v~~~~~~p--------- 142 (315)
.... +..+ .|...|.+++|+|+ +.+|++++.|+.|++||+.++ .....+..|...|.+++|+|
T Consensus 87 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 166 (379)
T 3jrp_A 87 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEH 166 (379)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-------
T ss_pred CCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccc
Confidence 6543 3333 35689999999999 999999999999999999877 34445678999999999999
Q ss_pred ----CCCEEEEEcCCCeEEEEcCCCCc----ceeEeecccccEEEEEECCC---CCEEEEeeCCCcEEEEEccCCCCCe-
Q psy9936 143 ----YNACICLGHRNGTVTMWSPTVQK----PLASLLCHKAGIQSVAVNHT---GTYMATSAGDSQLRIWDVRNLEGPL- 210 (315)
Q Consensus 143 ----~~~~l~~~~~d~~i~i~d~~~~~----~~~~~~~~~~~i~~~~~sp~---g~~l~~~~~d~~i~iwd~~~~~~~~- 210 (315)
++.+|++++.|+.|++||++++. .+..+.+|...|.+++|+|+ +.+|++++.||.|++||++++..+.
T Consensus 167 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 246 (379)
T 3jrp_A 167 NGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWK 246 (379)
T ss_dssp ---CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCE
T ss_pred cCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccce
Confidence 69999999999999999998765 34567789999999999999 8999999999999999999862221
Q ss_pred -eEec---cCCCceeEEEccCCe--EEEEcCCEEEecCC
Q psy9936 211 -NTFR---TRTPINNLAFSQRGL--LATSRGNIVEFLKP 243 (315)
Q Consensus 211 -~~~~---~~~~v~~~~~s~~g~--~~~~~~~~i~~~~~ 243 (315)
.... ....|++++|+|+|. ++++.|+.|++|+.
T Consensus 247 ~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~ 285 (379)
T 3jrp_A 247 KTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 285 (379)
T ss_dssp EEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEE
T ss_pred eeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeC
Confidence 2222 223699999999995 34457999999986
No 58
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.2e-35 Score=255.01 Aligned_cols=188 Identities=16% Similarity=0.150 Sum_probs=157.3
Q ss_pred eeEEEEeecCcEEEEEe---CCeEEEEeCC-CCEEEEeecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEE--
Q psy9936 54 VYDIKWLHLETMFAVAQ---KDWVYIYDNQ-GIELHCLKVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSD-- 127 (315)
Q Consensus 54 v~~~~~~~~~~~l~~~~---~~~i~i~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~-- 127 (315)
+.+++|+|||+++++++ |++|++||+. +..+..+.+...|.+++|+|+|+++++++.+ .+.+|+..++..+..
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~ 214 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKT 214 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEEC
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeee
Confidence 66799999999987654 7899999995 4556667788899999999999999999855 577777777765543
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEcCCC----eEEEEcCCCCcc----eeEeecccccEEEEEECCCCCEEEEeeCCCcEE
Q psy9936 128 FSAKKGKLSVMTQNPYNACICLGHRNG----TVTMWSPTVQKP----LASLLCHKAGIQSVAVNHTGTYMATSAGDSQLR 199 (315)
Q Consensus 128 ~~~~~~~v~~~~~~p~~~~l~~~~~d~----~i~i~d~~~~~~----~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~ 199 (315)
...|...+.+++|+|+++++++++.|+ .+++||+..... ...+.+|..+|++++|+|+|++||+|+.|++|+
T Consensus 215 ~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~ 294 (365)
T 4h5i_A 215 DFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIA 294 (365)
T ss_dssp CCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEE
T ss_pred cCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEE
Confidence 446788899999999999999998877 688999876543 345678999999999999999999999999999
Q ss_pred EEEccCCCCCeeEe-ccCC-CceeEEEccCCeEEE--EcCCEEEecCC
Q psy9936 200 IWDVRNLEGPLNTF-RTRT-PINNLAFSQRGLLAT--SRGNIVEFLKP 243 (315)
Q Consensus 200 iwd~~~~~~~~~~~-~~~~-~v~~~~~s~~g~~~~--~~~~~i~~~~~ 243 (315)
|||++++ +++..+ ..|. +|++++|+|||.+++ +.|++|++|++
T Consensus 295 iwd~~~~-~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 295 LVKLKDL-SMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKL 341 (365)
T ss_dssp EEETTTT-EEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEEC
T ss_pred EEECCCC-cEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 9999998 888775 5666 699999999996544 46999999985
No 59
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.2e-35 Score=252.25 Aligned_cols=248 Identities=15% Similarity=0.121 Sum_probs=210.9
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCce----EEEEecCCCceeEEEEeecCc-EEEEEe-CCeEEEEeC-CCC
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKT----LACEMNVMEEVYDIKWLHLET-MFAVAQ-KDWVYIYDN-QGI 82 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~----~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~~~i~i~~~-~~~ 82 (315)
.+.|.+++|+|++++|++++.||.|++|++.++. ......|...|.+++|+|++. +|++++ ++.|++||+ .+.
T Consensus 11 ~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~ 90 (342)
T 1yfq_A 11 KDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSP 90 (342)
T ss_dssp SSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSS
T ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCC
Confidence 6899999999999999999999999999998877 555566889999999999999 888776 899999999 876
Q ss_pred EEEEee---cCCceEEEEEcCCCceEEEEcCCCeEEEEEccC---------CeEEEEeccCCCCeEEEEEcCCCCEEEEE
Q psy9936 83 ELHCLK---VLNKVTRMEFLPYHFLLATASEEGYLSWLDTSI---------GKIVSDFSAKKGKLSVMTQNPYNACICLG 150 (315)
Q Consensus 83 ~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~---------~~~~~~~~~~~~~v~~~~~~p~~~~l~~~ 150 (315)
....+. |...|.+++|+| +.+|++++.|+.|++||+++ ++++..+. |...+.+++|+|++ ++++
T Consensus 91 ~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~ 166 (342)
T 1yfq_A 91 SFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVG 166 (342)
T ss_dssp SEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEE
T ss_pred ceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEE
Confidence 666654 668999999999 99999999999999999987 66666666 88899999999987 8999
Q ss_pred cCCCeEEEEcCCC-Ccc--eeEeecccccEEEEEECC-CCCEEEEeeCCCcEEEEEccCC-----CCCeeEeccCC----
Q psy9936 151 HRNGTVTMWSPTV-QKP--LASLLCHKAGIQSVAVNH-TGTYMATSAGDSQLRIWDVRNL-----EGPLNTFRTRT---- 217 (315)
Q Consensus 151 ~~d~~i~i~d~~~-~~~--~~~~~~~~~~i~~~~~sp-~g~~l~~~~~d~~i~iwd~~~~-----~~~~~~~~~~~---- 217 (315)
+.|+.|++||+++ +.. ......|...+.+++|+| +++++++++.||.|++|++... ..+...+..|.
T Consensus 167 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (342)
T 1yfq_A 167 MNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLK 246 (342)
T ss_dssp ESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTT
T ss_pred eCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeeccccccc
Confidence 9999999999998 543 233446888999999999 9999999999999999999875 36666776653
Q ss_pred ------CceeEEEccCCe--EEEEcCCEEEecCC-----------------CceeecccccccccCCcchh
Q psy9936 218 ------PINNLAFSQRGL--LATSRGNIVEFLKP-----------------PEINFEPRRKANKAGGSVQR 263 (315)
Q Consensus 218 ------~v~~~~~s~~g~--~~~~~~~~i~~~~~-----------------~~~~~~~~~~~~~~~~~~~~ 263 (315)
+|.+++|+|++. ++++.|+.|++|+. .+++ |++.++++++.++.
T Consensus 247 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 247 DTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp CCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred ccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCc
Confidence 699999999994 34456899999987 1233 88899999988875
No 60
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.5e-35 Score=254.37 Aligned_cols=196 Identities=12% Similarity=0.103 Sum_probs=170.9
Q ss_pred CcEEEEEEcCCCCEEEEE--cCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEeCCeEEEEeC-CCCEEEEe
Q psy9936 11 FGIYRMNYTKNGRHLLLG--GKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQKDWVYIYDN-QGIELHCL 87 (315)
Q Consensus 11 ~~v~~~~~s~~~~~l~~~--~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~-~~~~~~~~ 87 (315)
..+.+++|||||++++++ +.|++|+|||+.+++.+..+.|...|.+++|+|||+++++++++.+.+|+. .+..+...
T Consensus 134 ~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~ 213 (365)
T 4h5i_A 134 DYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARK 213 (365)
T ss_dssp CCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEE
T ss_pred cCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccceeEEEEEeccCcceeee
Confidence 457899999999987654 468999999999999999999999999999999999999999887777776 45444332
Q ss_pred ---ecCCceEEEEEcCCCceEEEEcCCC----eEEEEEccCCeE----EEEeccCCCCeEEEEEcCCCCEEEEEcCCCeE
Q psy9936 88 ---KVLNKVTRMEFLPYHFLLATASEEG----YLSWLDTSIGKI----VSDFSAKKGKLSVMTQNPYNACICLGHRNGTV 156 (315)
Q Consensus 88 ---~~~~~v~~~~~~~~~~~l~~~~~d~----~i~~~d~~~~~~----~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i 156 (315)
.|...|.+++|+|++.++++++.++ .+.+|++..... ...+..|...|++++|+|+|++||+|+.|++|
T Consensus 214 ~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V 293 (365)
T 4h5i_A 214 TDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSI 293 (365)
T ss_dssp CCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCE
T ss_pred ecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEE
Confidence 2456799999999999999998877 588899876643 34567889999999999999999999999999
Q ss_pred EEEcCCCCcceeEe-ecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCC
Q psy9936 157 TMWSPTVQKPLASL-LCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNL 206 (315)
Q Consensus 157 ~i~d~~~~~~~~~~-~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~ 206 (315)
+|||+++++++..+ .+|..+|++++|+|||++||+||.|++|+|||+...
T Consensus 294 ~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 294 ALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred EEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 99999999999875 689999999999999999999999999999999653
No 61
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2e-35 Score=256.10 Aligned_cols=238 Identities=16% Similarity=0.313 Sum_probs=205.4
Q ss_pred EEEeeC-CCcEEEEEEcCC----C---CEEEEEcCCCeEEEEEccCceE-----EEEec-C-----CCceeEEEEe----
Q psy9936 4 QFDLDL-QFGIYRMNYTKN----G---RHLLLGGKRGHVAAFDWVRKTL-----ACEMN-V-----MEEVYDIKWL---- 60 (315)
Q Consensus 4 ~~~~~~-~~~v~~~~~s~~----~---~~l~~~~~dg~i~v~~~~~~~~-----~~~~~-~-----~~~v~~~~~~---- 60 (315)
...+.. ..+|.+++|+|+ + ++|++++.||.|++|++.+++. ...+. | ...|.+++|+
T Consensus 55 ~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 134 (397)
T 1sq9_A 55 SYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASND 134 (397)
T ss_dssp EEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-
T ss_pred ceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccC
Confidence 455555 789999999999 9 9999999999999999988875 55655 5 4899999999
Q ss_pred ecCcE-EEEEe-CCeEEEEeCCC-------CEEE-----Eee--------cCCceEEEEEcCCCceEEEEcCCCeEEEEE
Q psy9936 61 HLETM-FAVAQ-KDWVYIYDNQG-------IELH-----CLK--------VLNKVTRMEFLPYHFLLATASEEGYLSWLD 118 (315)
Q Consensus 61 ~~~~~-l~~~~-~~~i~i~~~~~-------~~~~-----~~~--------~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 118 (315)
|++.+ |++++ |+.|++||+.. ..+. .+. +...+.+++|+|++ +|++++.|+.|++||
T Consensus 135 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d 213 (397)
T 1sq9_A 135 RLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISE 213 (397)
T ss_dssp ---CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEE
T ss_pred CCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEE
Confidence 99988 88775 89999999854 3222 332 46889999999999 999999999999999
Q ss_pred ccCCeEEEEecc---C---CCCeEEEEEcCCCCEEEEEcCC---CeEEEEcCCCCcceeEeec-------------cccc
Q psy9936 119 TSIGKIVSDFSA---K---KGKLSVMTQNPYNACICLGHRN---GTVTMWSPTVQKPLASLLC-------------HKAG 176 (315)
Q Consensus 119 ~~~~~~~~~~~~---~---~~~v~~~~~~p~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~-------------~~~~ 176 (315)
+++++.+..+.. | ...+.+++|+|++++|++++.| +.|++||+++++++..+.+ |...
T Consensus 214 ~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (397)
T 1sq9_A 214 LSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSW 293 (397)
T ss_dssp TTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSC
T ss_pred CCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCc
Confidence 999999999988 8 9999999999999999999999 9999999999999999988 9999
Q ss_pred EEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEec------cC----------------CCceeEEEccCC------
Q psy9936 177 IQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFR------TR----------------TPINNLAFSQRG------ 228 (315)
Q Consensus 177 i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~------~~----------------~~v~~~~~s~~g------ 228 (315)
|.+++|+|++++|++++.|+.|++||++++ +++..+. .| .+|++++|+|+|
T Consensus 294 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~ 372 (397)
T 1sq9_A 294 VMSLSFNDSGETLCSAGWDGKLRFWDVKTK-ERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMG 372 (397)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTT-EEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTT
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEEcCCC-ceeEEEecccCcccchhhhhccccccccccCCceeEEEecccccccccc
Confidence 999999999999999999999999999998 8888888 55 479999999997
Q ss_pred -----eE-EEEcCCEEEecCC
Q psy9936 229 -----LL-ATSRGNIVEFLKP 243 (315)
Q Consensus 229 -----~~-~~~~~~~i~~~~~ 243 (315)
.+ .++.|+.|++|+.
T Consensus 373 ~~~~~~l~s~~~dg~i~iw~~ 393 (397)
T 1sq9_A 373 ADLNESLCCVCLDRSIRWFRE 393 (397)
T ss_dssp CTTSCEEEEEETTTEEEEEEE
T ss_pred ccccceEEEecCCCcEEEEEc
Confidence 33 3445999999974
No 62
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=5.3e-35 Score=247.97 Aligned_cols=234 Identities=16% Similarity=0.201 Sum_probs=194.7
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCc----eEEEEec-CCCceeEEEEee--cCcEEEEEe-CCeEEEEeCCC
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRK----TLACEMN-VMEEVYDIKWLH--LETMFAVAQ-KDWVYIYDNQG 81 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~----~~~~~~~-~~~~v~~~~~~~--~~~~l~~~~-~~~i~i~~~~~ 81 (315)
...|++++|+|++++|++++.||.|++||+.++ +....+. |...|.+++|+| ++.+|++++ |+.|++||+..
T Consensus 11 ~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~ 90 (351)
T 3f3f_A 11 DDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDP 90 (351)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECT
T ss_pred ccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCC
Confidence 789999999999999999999999999999876 3455555 889999999999 588888876 89999999854
Q ss_pred C----------EEEEe-ecCCceEEEEEcCC--CceEEEEcCCCeEEEEEccCCeEEEEec-------------cCCCCe
Q psy9936 82 I----------ELHCL-KVLNKVTRMEFLPY--HFLLATASEEGYLSWLDTSIGKIVSDFS-------------AKKGKL 135 (315)
Q Consensus 82 ~----------~~~~~-~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~~~~~~~~-------------~~~~~v 135 (315)
. .+..+ .|...|.+++|+|+ +.+|++++.||.|++||+++++.+..+. .|...+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (351)
T 3f3f_A 91 DQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSD 170 (351)
T ss_dssp TSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCC
T ss_pred CcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccce
Confidence 2 23333 46689999999999 9999999999999999998875443322 577789
Q ss_pred EEEEEcCC---CCEEEEEcCCCeEEEEcCCCCcc--eeEeecccccEEEEEECCCC----CEEEEeeCCCcEEEEEccCC
Q psy9936 136 SVMTQNPY---NACICLGHRNGTVTMWSPTVQKP--LASLLCHKAGIQSVAVNHTG----TYMATSAGDSQLRIWDVRNL 206 (315)
Q Consensus 136 ~~~~~~p~---~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~i~~~~~sp~g----~~l~~~~~d~~i~iwd~~~~ 206 (315)
.+++|+|+ +.++++++.++.+.+|+...++. +..+.+|...|++++|+|++ .+|++++.||.|++||++..
T Consensus 171 ~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 171 FCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEK 250 (351)
T ss_dssp EEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEEC
T ss_pred eEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCC
Confidence 99999997 88999999999998888887764 66777899999999999998 89999999999999999874
Q ss_pred C---------------------------------------------CCeeEeccCC-CceeEEEccCCe--EEEEcCCEE
Q psy9936 207 E---------------------------------------------GPLNTFRTRT-PINNLAFSQRGL--LATSRGNIV 238 (315)
Q Consensus 207 ~---------------------------------------------~~~~~~~~~~-~v~~~~~s~~g~--~~~~~~~~i 238 (315)
. .++..+..|. .|++++|+|++. +.++.|+.|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v 330 (351)
T 3f3f_A 251 LSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKV 330 (351)
T ss_dssp C---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCE
T ss_pred cCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcE
Confidence 1 2344455554 699999999984 344458999
Q ss_pred EecCC
Q psy9936 239 EFLKP 243 (315)
Q Consensus 239 ~~~~~ 243 (315)
++|+.
T Consensus 331 ~iw~~ 335 (351)
T 3f3f_A 331 RLWKA 335 (351)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 99985
No 63
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=4.4e-36 Score=256.90 Aligned_cols=231 Identities=11% Similarity=0.148 Sum_probs=198.9
Q ss_pred CCcEEEEEEcCC----CCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEee-cCcEEEEEe-CCeEEEEeCCC-
Q psy9936 10 QFGIYRMNYTKN----GRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLH-LETMFAVAQ-KDWVYIYDNQG- 81 (315)
Q Consensus 10 ~~~v~~~~~s~~----~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~-~~~~l~~~~-~~~i~i~~~~~- 81 (315)
...|++++|+|+ +.+|++++.||.|++||+.+++.+..+. |...|.+++|+| ++.+|++++ |+.|++||+..
T Consensus 69 ~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 148 (366)
T 3k26_A 69 DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTD 148 (366)
T ss_dssp TCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTT
T ss_pred CCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecC
Confidence 477999999999 6799999999999999999999888887 889999999999 889888887 89999999964
Q ss_pred CEEEEe----ecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEec----------------------------
Q psy9936 82 IELHCL----KVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFS---------------------------- 129 (315)
Q Consensus 82 ~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~---------------------------- 129 (315)
..+..+ .|...|.+++|+|++.+|++++.||.|++||+++++....+.
T Consensus 149 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (366)
T 3k26_A 149 TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRD 228 (366)
T ss_dssp EEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECS
T ss_pred eEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcccccc
Confidence 444444 366899999999999999999999999999998765443333
Q ss_pred cCCCCeEEEEEcCCCCEEEEEcCCCeEEEEcCCCCcc--------------eeEeecccccEEEEEECCC--CCEEEEee
Q psy9936 130 AKKGKLSVMTQNPYNACICLGHRNGTVTMWSPTVQKP--------------LASLLCHKAGIQSVAVNHT--GTYMATSA 193 (315)
Q Consensus 130 ~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~--------------~~~~~~~~~~i~~~~~sp~--g~~l~~~~ 193 (315)
.|...|.+++|+ +++|++++.|+.|++||++++.. +..+..|...|++++|+|+ +++|++|+
T Consensus 229 ~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~ 306 (366)
T 3k26_A 229 IHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGN 306 (366)
T ss_dssp SCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEEC
T ss_pred CCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEe
Confidence 388999999998 77999999999999999987654 6777889999999999999 99999999
Q ss_pred CCCcEEEEEccCCCCCee----EeccC---CCceeEEEccCCeE--EEEcCCEEEecCC
Q psy9936 194 GDSQLRIWDVRNLEGPLN----TFRTR---TPINNLAFSQRGLL--ATSRGNIVEFLKP 243 (315)
Q Consensus 194 ~d~~i~iwd~~~~~~~~~----~~~~~---~~v~~~~~s~~g~~--~~~~~~~i~~~~~ 243 (315)
.||.|++||+.++ .+.. .+..| .+|++++|+|++.+ .++.|+.|++|++
T Consensus 307 ~dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 307 QVGKLYVWDLEVE-DPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDR 364 (366)
T ss_dssp TTSCEEEEECCSS-SGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred cCCcEEEEECCCC-CCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEe
Confidence 9999999999987 5433 56665 47999999999953 4456899999985
No 64
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.4e-35 Score=253.15 Aligned_cols=257 Identities=11% Similarity=0.168 Sum_probs=209.5
Q ss_pred CCcEEEEEEcCCCCEE-EEEcC---CCeEEEEEccCceEEEE--ecCCCceeEEEEeec---CcEEEEEe-CCeEEEEeC
Q psy9936 10 QFGIYRMNYTKNGRHL-LLGGK---RGHVAAFDWVRKTLACE--MNVMEEVYDIKWLHL---ETMFAVAQ-KDWVYIYDN 79 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l-~~~~~---dg~i~v~~~~~~~~~~~--~~~~~~v~~~~~~~~---~~~l~~~~-~~~i~i~~~ 79 (315)
...|.+++|+|++..+ ++++. ||.|++|++.+++.... +.|...|.+++|+|+ +.+|++++ |+.|++||+
T Consensus 18 ~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~ 97 (357)
T 3i2n_A 18 NYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNL 97 (357)
T ss_dssp SSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECT
T ss_pred CCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeC
Confidence 7899999999999755 56655 89999999998876443 458899999999998 68888776 899999999
Q ss_pred CCC--EEEEe-ecCCceEEEEE------cCCCceEEEEcCCCeEEEEEccCCe-EEEEeccCCC----CeEEEE----Ec
Q psy9936 80 QGI--ELHCL-KVLNKVTRMEF------LPYHFLLATASEEGYLSWLDTSIGK-IVSDFSAKKG----KLSVMT----QN 141 (315)
Q Consensus 80 ~~~--~~~~~-~~~~~v~~~~~------~~~~~~l~~~~~d~~i~~~d~~~~~-~~~~~~~~~~----~v~~~~----~~ 141 (315)
... .+..+ .|...|.++.| +|++.+|++++.|+.|++||+.++. .+..+..|.+ .+.+++ |+
T Consensus 98 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 177 (357)
T 3i2n_A 98 EAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYN 177 (357)
T ss_dssp TSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC
T ss_pred CCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccC
Confidence 533 34444 46688999955 6789999999999999999999886 6777766554 788888 78
Q ss_pred CCCCEEEEEcCCCeEEEEcCCCCcceeEeecccccEEEEEECC---CCCEEEEeeCCCcEEEEEccCCCCCeeEec----
Q psy9936 142 PYNACICLGHRNGTVTMWSPTVQKPLASLLCHKAGIQSVAVNH---TGTYMATSAGDSQLRIWDVRNLEGPLNTFR---- 214 (315)
Q Consensus 142 p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp---~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~---- 214 (315)
|++++|++++.|+.|++||+++++.... ..|...|.+++|+| ++.+|++++.||.|++||++++ .++..+.
T Consensus 178 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~ 255 (357)
T 3i2n_A 178 QEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQ-HPTKGFASVSE 255 (357)
T ss_dssp -CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEE-ETTTEEEEEEE
T ss_pred CCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCC-Ccccceeeecc
Confidence 9999999999999999999999876544 56889999999999 9999999999999999999987 6655543
Q ss_pred -cCC-CceeEEEccCCe-EE--EEcCCEEEecCC-----------------------------------Cceeecccccc
Q psy9936 215 -TRT-PINNLAFSQRGL-LA--TSRGNIVEFLKP-----------------------------------PEINFEPRRKA 254 (315)
Q Consensus 215 -~~~-~v~~~~~s~~g~-~~--~~~~~~i~~~~~-----------------------------------~~~~~~~~~~~ 254 (315)
.|. .|++++|+|++. ++ ++.|+.|++|+. .+++|+|++++
T Consensus 256 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 335 (357)
T 3i2n_A 256 KAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRG 335 (357)
T ss_dssp ECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTT
T ss_pred CCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCe
Confidence 454 699999999985 33 345899999974 46889999999
Q ss_pred cc-cCCcchhhhhhh
Q psy9936 255 NK-AGGSVQRAKVKK 268 (315)
Q Consensus 255 ~~-~~~~~~~~~~~~ 268 (315)
++ +++.++.++.+.
T Consensus 336 l~~s~~~d~~i~iw~ 350 (357)
T 3i2n_A 336 LCVCSSFDQTVRVLI 350 (357)
T ss_dssp EEEEEETTSEEEEEE
T ss_pred EEEEecCCCcEEEEE
Confidence 98 788887766553
No 65
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=5.2e-35 Score=287.27 Aligned_cols=261 Identities=15% Similarity=0.224 Sum_probs=227.1
Q ss_pred eeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCC-CC
Q psy9936 7 LDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQ-GI 82 (315)
Q Consensus 7 ~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~-~~ 82 (315)
+.. ...|++++|+|+|++|++|+.||.|++||+.+++.+..+. |...|.+++|+|++++|++++ |+.|++||+. +.
T Consensus 611 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~ 690 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGK 690 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred EecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCc
Confidence 344 7889999999999999999999999999999999888887 889999999999999999887 8999999994 55
Q ss_pred EEEEe-ecCCceEEEEEcCC--CceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCeEEEE
Q psy9936 83 ELHCL-KVLNKVTRMEFLPY--HFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNGTVTMW 159 (315)
Q Consensus 83 ~~~~~-~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~ 159 (315)
.+..+ .|...|.+++|+|+ +.++++++.|+.|++||+.+++.+..+.+|.+.|.+++|+|++++|++++.||.|++|
T Consensus 691 ~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vw 770 (1249)
T 3sfz_A 691 LVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLW 770 (1249)
T ss_dssp EEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEE
T ss_pred eEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEE
Confidence 55555 45689999999994 5689999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcceeEe-------------------------------------------------------ecccccEEEEEECC
Q psy9936 160 SPTVQKPLASL-------------------------------------------------------LCHKAGIQSVAVNH 184 (315)
Q Consensus 160 d~~~~~~~~~~-------------------------------------------------------~~~~~~i~~~~~sp 184 (315)
|+++++....+ .+|...|.+++|+|
T Consensus 771 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp 850 (1249)
T 3sfz_A 771 DVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSP 850 (1249)
T ss_dssp EGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECS
T ss_pred eCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcC
Confidence 98765433222 15778899999999
Q ss_pred CCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-CceeEEEccCCe--EEEEcCCEEEecCC------------------
Q psy9936 185 TGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-PINNLAFSQRGL--LATSRGNIVEFLKP------------------ 243 (315)
Q Consensus 185 ~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~g~--~~~~~~~~i~~~~~------------------ 243 (315)
++.++++++.|+.|++||+.++ .++..+..|. .|.+++|+|+|. +.++.|+.+++|+.
T Consensus 851 ~~~~l~~~~~dg~v~vwd~~~~-~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~ 929 (1249)
T 3sfz_A 851 YDHLAVIALSQYCVELWNIDSR-LKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVV 929 (1249)
T ss_dssp STTEEEEECSSSCEEEEETTTT-EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEE
T ss_pred CCCEEEEEeCCCeEEEEEcCCC-ceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEE
Confidence 9999999999999999999998 8888888776 699999999994 44556899999972
Q ss_pred -----------------------------------CceeecccccccccCCcchhhhhhh
Q psy9936 244 -----------------------------------PEINFEPRRKANKAGGSVQRAKVKK 268 (315)
Q Consensus 244 -----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (315)
.+++|+|++.+++.|+.++.+....
T Consensus 930 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d 989 (1249)
T 3sfz_A 930 FQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIE 989 (1249)
T ss_dssp EETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEE
T ss_pred EcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEE
Confidence 4578999999999998887665544
No 66
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=9.6e-35 Score=257.13 Aligned_cols=258 Identities=15% Similarity=0.198 Sum_probs=217.5
Q ss_pred EEeeC-CCc-EEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEeCCeEEEEeCCC
Q psy9936 5 FDLDL-QFG-IYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQKDWVYIYDNQG 81 (315)
Q Consensus 5 ~~~~~-~~~-v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~~~ 81 (315)
..+.. ... +.++.+ ++++|++|+.||.|++||+.+++.+..+. |...|.+++|+|++.+++++.|+.|++||+..
T Consensus 115 ~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~ 192 (464)
T 3v7d_B 115 TTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKK 192 (464)
T ss_dssp EEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTT
T ss_pred EEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCC
Confidence 34555 444 566666 56799999999999999999999998887 89999999999998444444599999999954
Q ss_pred -CEEEEee-cCCceEEEEEc--CCCceEEEEcCCCeEEEEEccCCeE-----------------------EEEeccCCCC
Q psy9936 82 -IELHCLK-VLNKVTRMEFL--PYHFLLATASEEGYLSWLDTSIGKI-----------------------VSDFSAKKGK 134 (315)
Q Consensus 82 -~~~~~~~-~~~~v~~~~~~--~~~~~l~~~~~d~~i~~~d~~~~~~-----------------------~~~~~~~~~~ 134 (315)
..+..+. |...|.+++|+ +++.++++++.|+.|++||+.++.. +..+.+|...
T Consensus 193 ~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (464)
T 3v7d_B 193 GCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMAS 272 (464)
T ss_dssp TEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSC
T ss_pred CcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccce
Confidence 4444554 66899999998 5778999999999999999987642 4566778888
Q ss_pred eEEEEEcCCCCEEEEEcCCCeEEEEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEec
Q psy9936 135 LSVMTQNPYNACICLGHRNGTVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFR 214 (315)
Q Consensus 135 v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 214 (315)
+.++ +|+++++++++.|+.|++||+++++++..+.+|...|.+++|+|++++|++|+.|+.|++||++++ +++..+.
T Consensus 273 v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~-~~~~~~~ 349 (464)
T 3v7d_B 273 VRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENG-ELMYTLQ 349 (464)
T ss_dssp EEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT-EEEEEEC
T ss_pred EEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC-cEEEEEe
Confidence 8776 678899999999999999999999999999999999999999999999999999999999999998 8888888
Q ss_pred cCC-CceeEEEccCCeEEEEcCCEEEecCC---------------CceeecccccccccCCcchhhhhhh
Q psy9936 215 TRT-PINNLAFSQRGLLATSRGNIVEFLKP---------------PEINFEPRRKANKAGGSVQRAKVKK 268 (315)
Q Consensus 215 ~~~-~v~~~~~s~~g~~~~~~~~~i~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (315)
.|. .|.+++|+++-.+.++.|+.|++|++ ..+.|+|++.++++++ ++.++.+.
T Consensus 350 ~h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd 418 (464)
T 3v7d_B 350 GHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYN 418 (464)
T ss_dssp CCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-TTEEEEEE
T ss_pred CCCCcEEEEEEcCCEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-CCeEEEEE
Confidence 776 69999998654566778999999988 4578999999999888 56555554
No 67
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=8.1e-35 Score=252.62 Aligned_cols=261 Identities=13% Similarity=0.195 Sum_probs=214.7
Q ss_pred CCcEEEEEEcC-CCCEEEEEcCCCeEEEEEccCceEEEEec--------------CCCceeEEEEee-cCcEEEEEe-CC
Q psy9936 10 QFGIYRMNYTK-NGRHLLLGGKRGHVAAFDWVRKTLACEMN--------------VMEEVYDIKWLH-LETMFAVAQ-KD 72 (315)
Q Consensus 10 ~~~v~~~~~s~-~~~~l~~~~~dg~i~v~~~~~~~~~~~~~--------------~~~~v~~~~~~~-~~~~l~~~~-~~ 72 (315)
..+|++++|+| ++++|++++.||.|++||+.++.....+. |...|.+++|+| ++.+|++++ |+
T Consensus 43 ~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~ 122 (408)
T 4a11_B 43 GGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDK 122 (408)
T ss_dssp SSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTS
T ss_pred CCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCC
Confidence 78999999999 99999999999999999998876543332 788999999999 677777776 89
Q ss_pred eEEEEeCCC-CEEEEeecCCceEEEEEcCCC---ceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCC-EE
Q psy9936 73 WVYIYDNQG-IELHCLKVLNKVTRMEFLPYH---FLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNA-CI 147 (315)
Q Consensus 73 ~i~i~~~~~-~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~-~l 147 (315)
.|++||+.. .....+.+...+.++.|+|.+ .++++++.++.|++||+.+++.+..+..|...|.+++|+|+++ +|
T Consensus 123 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll 202 (408)
T 4a11_B 123 TLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYIL 202 (408)
T ss_dssp EEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEE
T ss_pred eEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEE
Confidence 999999954 445556777899999999954 4999999999999999999999999999999999999999998 58
Q ss_pred EEEcCCCeEEEEcCCCCc-ceeEe---------------ecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCee
Q psy9936 148 CLGHRNGTVTMWSPTVQK-PLASL---------------LCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLN 211 (315)
Q Consensus 148 ~~~~~d~~i~i~d~~~~~-~~~~~---------------~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~ 211 (315)
++++.||.|++||++++. ++..+ ..|...|.+++|+|++++|++++.|+.|++||+.++ ....
T Consensus 203 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~-~~~~ 281 (408)
T 4a11_B 203 ATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNG-ENTL 281 (408)
T ss_dssp EEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-CBCC
T ss_pred EEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCC-ccce
Confidence 899999999999998765 33333 568899999999999999999999999999999987 5444
Q ss_pred EeccCC------C-ceeEEEccCC-eEEEEcCCEEEecCC----------------CceeecccccccccCCcchhhhhh
Q psy9936 212 TFRTRT------P-INNLAFSQRG-LLATSRGNIVEFLKP----------------PEINFEPRRKANKAGGSVQRAKVK 267 (315)
Q Consensus 212 ~~~~~~------~-v~~~~~s~~g-~~~~~~~~~i~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~ 267 (315)
....+. . ...+...+.+ .++++.++.|++|+. .+++|+|++.++++++.++.++.+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw 361 (408)
T 4a11_B 282 VNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAW 361 (408)
T ss_dssp CCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred eccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEE
Confidence 333221 1 1222222233 466677999999875 678999999999999999987777
Q ss_pred hhhH
Q psy9936 268 KIVR 271 (315)
Q Consensus 268 ~~~~ 271 (315)
....
T Consensus 362 ~~~~ 365 (408)
T 4a11_B 362 VPSL 365 (408)
T ss_dssp EECC
T ss_pred eCCC
Confidence 5443
No 68
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.7e-34 Score=244.40 Aligned_cols=237 Identities=12% Similarity=0.118 Sum_probs=208.8
Q ss_pred EEeeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEe-C-----CeEEEE
Q psy9936 5 FDLDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQ-K-----DWVYIY 77 (315)
Q Consensus 5 ~~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~-----~~i~i~ 77 (315)
..+.. ...|.+++|+|++++|++++.||.|++||+.+++....+.+...+.+++|+|++.+++++. + +.|++|
T Consensus 68 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~ 147 (369)
T 3zwl_B 68 GTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIY 147 (369)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEE
T ss_pred hhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEE
Confidence 34554 7889999999999999999999999999999999999888999999999999999998876 5 899999
Q ss_pred eCCCC------------EEEE-eecCC--ceEEEEEcCCCceEEEEcCCCeEEEEEccC-CeEEEEeccCCCCeEEEEEc
Q psy9936 78 DNQGI------------ELHC-LKVLN--KVTRMEFLPYHFLLATASEEGYLSWLDTSI-GKIVSDFSAKKGKLSVMTQN 141 (315)
Q Consensus 78 ~~~~~------------~~~~-~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~-~~~~~~~~~~~~~v~~~~~~ 141 (315)
|+... .... ..+.. .+.+++|+|++++|++++.||.|++||+.+ +..+..+..|...|.+++|+
T Consensus 148 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~ 227 (369)
T 3zwl_B 148 EIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFS 227 (369)
T ss_dssp EEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEEC
T ss_pred EecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEEC
Confidence 97321 1111 12223 899999999999999999999999999998 78888899999999999999
Q ss_pred CCCCEEEEEcCCCeEEEEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCC--------------cEEEEEccCCC
Q psy9936 142 PYNACICLGHRNGTVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDS--------------QLRIWDVRNLE 207 (315)
Q Consensus 142 p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~--------------~i~iwd~~~~~ 207 (315)
|++++|++++.|+.|++||+++++.+..+. +...+.+++|+|++.++++++.++ .+++||+.++
T Consensus 228 ~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~- 305 (369)
T 3zwl_B 228 PDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFE- 305 (369)
T ss_dssp TTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTC-
T ss_pred CCCCEEEEecCCceEEEEECCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCC-
Confidence 999999999999999999999999888887 788999999999999999999988 8999999998
Q ss_pred CCeeEeccCC-CceeEEEccCCeEE--EEcCCEEEecCC
Q psy9936 208 GPLNTFRTRT-PINNLAFSQRGLLA--TSRGNIVEFLKP 243 (315)
Q Consensus 208 ~~~~~~~~~~-~v~~~~~s~~g~~~--~~~~~~i~~~~~ 243 (315)
.++..+..|. .|++++|+|++.++ ++.|+.|++|+.
T Consensus 306 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~ 344 (369)
T 3zwl_B 306 EEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHF 344 (369)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEE
T ss_pred cchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 8888888776 69999999999543 345999999984
No 69
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-36 Score=269.23 Aligned_cols=256 Identities=8% Similarity=0.072 Sum_probs=201.9
Q ss_pred CCcEEEEEEcCC------CCEEEEEcCCCeEEEEEccCceE-----------EEEec-CCCceeEEEEeecCcEEEEEe-
Q psy9936 10 QFGIYRMNYTKN------GRHLLLGGKRGHVAAFDWVRKTL-----------ACEMN-VMEEVYDIKWLHLETMFAVAQ- 70 (315)
Q Consensus 10 ~~~v~~~~~s~~------~~~l~~~~~dg~i~v~~~~~~~~-----------~~~~~-~~~~v~~~~~~~~~~~l~~~~- 70 (315)
.+.|.+++|+|+ +.+||+++.||+|++||+.++.. ...+. |...|.+++|++++ .|++|+
T Consensus 207 ~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~ 285 (524)
T 2j04_B 207 FGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFK 285 (524)
T ss_dssp CCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEET
T ss_pred CCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeC
Confidence 578999999997 57999999999999999976532 12344 77899999999876 455554
Q ss_pred CCeEEEEeCCCC--EEE-EeecCCceEEE--EEcCCC-ceEEEEcCCCeEEEEEccCCeEEEEeccCCC--CeEEEEEcC
Q psy9936 71 KDWVYIYDNQGI--ELH-CLKVLNKVTRM--EFLPYH-FLLATASEEGYLSWLDTSIGKIVSDFSAKKG--KLSVMTQNP 142 (315)
Q Consensus 71 ~~~i~i~~~~~~--~~~-~~~~~~~v~~~--~~~~~~-~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~--~v~~~~~~p 142 (315)
||+|++||+... ... ...|...|.++ .|+|++ .+|++++.|++|++||+++++....+.+|.. .+.+++|+|
T Consensus 286 DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp 365 (524)
T 2j04_B 286 NGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCP 365 (524)
T ss_dssp TSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEET
T ss_pred CCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCC
Confidence 899999999632 223 33567899999 578887 8999999999999999998876666665543 478899999
Q ss_pred CCCEEEEEcCCCeEEEEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEecc----CC-
Q psy9936 143 YNACICLGHRNGTVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRT----RT- 217 (315)
Q Consensus 143 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~----~~- 217 (315)
+++.+++++.|++|++||++++.++..+.+|.+.|++++|+|+|++|++|+.|++|++||+... .+..... +.
T Consensus 366 ~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~--~~~~~~~~~~~~~~ 443 (524)
T 2j04_B 366 QIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR--LLHGIKNSSATQKS 443 (524)
T ss_dssp TTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS--TTTCC------CCC
T ss_pred CcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh--hccccccCccceee
Confidence 9999999999999999999999988889999999999999999999999999999999998653 3332221 11
Q ss_pred -CceeEEEccCCeEEEEcC-CEEEecC---------------CCceeeccccc---ccccCCcchhhhhhh
Q psy9936 218 -PINNLAFSQRGLLATSRG-NIVEFLK---------------PPEINFEPRRK---ANKAGGSVQRAKVKK 268 (315)
Q Consensus 218 -~v~~~~~s~~g~~~~~~~-~~i~~~~---------------~~~~~~~~~~~---~~~~~~~~~~~~~~~ 268 (315)
.+.+++|+|+|..+...+ -.+..|. +.+++|+|++. .+++|+.++.++.+.
T Consensus 444 ~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~ 514 (524)
T 2j04_B 444 LRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEY 514 (524)
T ss_dssp CEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEE
T ss_pred eEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEE
Confidence 367999999996443333 1121121 17899999964 899999888777665
No 70
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=3.3e-36 Score=295.75 Aligned_cols=257 Identities=15% Similarity=0.207 Sum_probs=228.8
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCCCCEEEE-
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGIELHC- 86 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~~~~~- 86 (315)
...+.+++|+|+++++++|+.+|.|++|++.+++....+. |...|.+++|+|++++|++++ |+.|++||+.+.....
T Consensus 961 ~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~ 1040 (1249)
T 3sfz_A 961 EAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFL 1040 (1249)
T ss_dssp CSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECC
T ss_pred cCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEE
Confidence 5679999999999999999999999999999998887776 888999999999999998886 8999999996554433
Q ss_pred eecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCeEEEEcCCCCcc
Q psy9936 87 LKVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNGTVTMWSPTVQKP 166 (315)
Q Consensus 87 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~ 166 (315)
..+...+.++.|+|++ .+++++.|+.|++||+.+++....+.+|.+.|.+++|+|+++++++++.|+.|++||+.++++
T Consensus 1041 ~~~~~~v~~~~~~~~~-~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~ 1119 (1249)
T 3sfz_A 1041 QAHQETVKDFRLLQDS-RLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSP 1119 (1249)
T ss_dssp BCCSSCEEEEEECSSS-EEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSC
T ss_pred ecCCCcEEEEEEcCCC-cEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcce
Confidence 4566899999999976 577889999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEe---------ccC-CCceeEEEccCCeEEEEcCC
Q psy9936 167 LASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTF---------RTR-TPINNLAFSQRGLLATSRGN 236 (315)
Q Consensus 167 ~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~---------~~~-~~v~~~~~s~~g~~~~~~~~ 236 (315)
+..+.+|...|++++|+|+|++|++++.||.|++||+.++ .++..+ ..| ..|++++|+|||.+++++++
T Consensus 1120 ~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~g 1198 (1249)
T 3sfz_A 1120 LHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDG-QLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAGG 1198 (1249)
T ss_dssp SBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSS-CCCCCCCCCC-------CCSCCCEEEECTTSSCEEEESS
T ss_pred eeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCC-ceEEEeccccccccccccCceEEEEEECCCCCEEEECCC
Confidence 9999999999999999999999999999999999999988 666554 233 36999999999987777789
Q ss_pred EEEecCC----------------CceeecccccccccCCcchhhhhhh
Q psy9936 237 IVEFLKP----------------PEINFEPRRKANKAGGSVQRAKVKK 268 (315)
Q Consensus 237 ~i~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (315)
.|++|++ .+++|+|+++.+++++.++.+..++
T Consensus 1199 ~v~vwd~~~g~~~~~~~~~~~~i~~~~~s~dg~~l~~~~~dg~v~vw~ 1246 (1249)
T 3sfz_A 1199 YLKWWNVATGDSSQTFYTNGTNLKKIHVSPDFRTYVTVDNLGILYILQ 1246 (1249)
T ss_dssp SEEEBCSSSCBCCCCCCCSSCCCCCCEECSSSCCEEEECTTCCEEEEC
T ss_pred eEEEEECCCCceeeeeeccCCcccEEEECCCCCEEEEecCCcEEEEEe
Confidence 9999986 6789999999999999887665543
No 71
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.8e-36 Score=265.81 Aligned_cols=237 Identities=13% Similarity=0.116 Sum_probs=190.3
Q ss_pred EEeeCCCcEEEEEEcCCC---------CEEEE-------------------EcCCCeEEEEEccCceEE----EEec-CC
Q psy9936 5 FDLDLQFGIYRMNYTKNG---------RHLLL-------------------GGKRGHVAAFDWVRKTLA----CEMN-VM 51 (315)
Q Consensus 5 ~~~~~~~~v~~~~~s~~~---------~~l~~-------------------~~~dg~i~v~~~~~~~~~----~~~~-~~ 51 (315)
+.+...+.|.+|+|+|++ ++||+ ++.|++|+||++.+++.. ..+. |.
T Consensus 128 ~~~~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~ 207 (524)
T 2j04_B 128 FIYNVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSF 207 (524)
T ss_dssp EEEECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECC
T ss_pred EEEECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecC
Confidence 344457788889998876 56666 457789999999877642 2344 56
Q ss_pred CceeEEEEeec------CcEEEEEe-CCeEEEEeCCCCE-------------EEEeecCCceEEEEEcCCCceEEEEcCC
Q psy9936 52 EEVYDIKWLHL------ETMFAVAQ-KDWVYIYDNQGIE-------------LHCLKVLNKVTRMEFLPYHFLLATASEE 111 (315)
Q Consensus 52 ~~v~~~~~~~~------~~~l~~~~-~~~i~i~~~~~~~-------------~~~~~~~~~v~~~~~~~~~~~l~~~~~d 111 (315)
+.|.+++|+|+ +.+||+++ |++|++||+.... .....|...|.+++|+|++ .|++|+.|
T Consensus 208 ~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~D 286 (524)
T 2j04_B 208 GEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKN 286 (524)
T ss_dssp CSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETT
T ss_pred CcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCC
Confidence 88999999996 56888776 8999999995321 1122356889999999865 89999999
Q ss_pred CeEEEEEccCC-eEEEEeccCCCCeEEE--EEcCCC-CEEEEEcCCCeEEEEcCCCCcceeEeecccc--cEEEEEECCC
Q psy9936 112 GYLSWLDTSIG-KIVSDFSAKKGKLSVM--TQNPYN-ACICLGHRNGTVTMWSPTVQKPLASLLCHKA--GIQSVAVNHT 185 (315)
Q Consensus 112 ~~i~~~d~~~~-~~~~~~~~~~~~v~~~--~~~p~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--~i~~~~~sp~ 185 (315)
|+|++||++++ .+...+.+|...|.++ +|+|+| .+|++|+.|++|+|||+++++++..+.+|.. .|.+++|+|+
T Consensus 287 gtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~ 366 (524)
T 2j04_B 287 GFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQ 366 (524)
T ss_dssp SEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETT
T ss_pred CEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCC
Confidence 99999999876 3455688899999999 578888 8999999999999999999888877777753 5789999999
Q ss_pred CCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-CceeEEEccCCe--EEEEcCCEEEecCC
Q psy9936 186 GTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-PINNLAFSQRGL--LATSRGNIVEFLKP 243 (315)
Q Consensus 186 g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~g~--~~~~~~~~i~~~~~ 243 (315)
+..+++++.|++|++||++++ .++..+..|. +|++++|+|+|. +.++.|++|++|++
T Consensus 367 ~~~l~s~~~d~tv~lwd~~~~-~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~ 426 (524)
T 2j04_B 367 IYSYIYSDGASSLRAVPSRAA-FAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNA 426 (524)
T ss_dssp TTEEEEECSSSEEEEEETTCT-TCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBS
T ss_pred cCeEEEeCCCCcEEEEECccc-ccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEec
Confidence 999999999999999999998 7777777776 699999999994 45567999999976
No 72
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2e-34 Score=248.84 Aligned_cols=230 Identities=17% Similarity=0.168 Sum_probs=193.1
Q ss_pred CCcEEEEEEcC-CCCEEEEEcCCCeEEEEEccCceEEEEec---CCCceeEEEEeecCcEEEEEe-CCeEEEEeCCCCEE
Q psy9936 10 QFGIYRMNYTK-NGRHLLLGGKRGHVAAFDWVRKTLACEMN---VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGIEL 84 (315)
Q Consensus 10 ~~~v~~~~~s~-~~~~l~~~~~dg~i~v~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~~~ 84 (315)
...|.+++|+| ++.+|++++.|+.|++||+.+........ +...|.+++|+|++.+|++++ |+.|++||+++..+
T Consensus 118 ~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 197 (383)
T 3ei3_B 118 GDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEI 197 (383)
T ss_dssp TCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEE
T ss_pred CCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEE
Confidence 78999999999 78999999999999999998755443333 337799999999999999887 89999999987777
Q ss_pred EEee-cCCceEEEEEcCCCc-eEEEEcCCCeEEEEEccC----CeEEEEeccCCCCeEEEEEcC-CCCEEEEEcCCCeEE
Q psy9936 85 HCLK-VLNKVTRMEFLPYHF-LLATASEEGYLSWLDTSI----GKIVSDFSAKKGKLSVMTQNP-YNACICLGHRNGTVT 157 (315)
Q Consensus 85 ~~~~-~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~----~~~~~~~~~~~~~v~~~~~~p-~~~~l~~~~~d~~i~ 157 (315)
..+. |...|.+++|+|++. +|++++.|+.|++||+++ +..+..+ .|...|.+++|+| ++++|++++.|+.|+
T Consensus 198 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~ 276 (383)
T 3ei3_B 198 FKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIR 276 (383)
T ss_dssp EEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEE
T ss_pred EEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEE
Confidence 6665 568999999999998 999999999999999997 5666666 6899999999999 999999999999999
Q ss_pred EEcCCCCcceeEeeccc-----------------ccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccC--CC
Q psy9936 158 MWSPTVQKPLASLLCHK-----------------AGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTR--TP 218 (315)
Q Consensus 158 i~d~~~~~~~~~~~~~~-----------------~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--~~ 218 (315)
+||+++++.+..+.+|. ..+..++|+|+|++ +++.|+.|++||+.++ +++..+..+ ..
T Consensus 277 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~-~~~~~l~~~~~~~ 353 (383)
T 3ei3_B 277 VYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSG-GLVHQLRDPNAAG 353 (383)
T ss_dssp EEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTC-CEEEEECBTTBCS
T ss_pred EEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCC-ceeeeecCCCCCc
Confidence 99999988877776553 23444666666666 7779999999999998 888888763 34
Q ss_pred -ceeEEEccCCe-EEEEcCCEEEecCC
Q psy9936 219 -INNLAFSQRGL-LATSRGNIVEFLKP 243 (315)
Q Consensus 219 -v~~~~~s~~g~-~~~~~~~~i~~~~~ 243 (315)
+..++|+|+|. +++++|+.|++|++
T Consensus 354 ~~~~~~~s~~g~~l~s~sd~~i~iw~~ 380 (383)
T 3ei3_B 354 IISLNKFSPTGDVLASGMGFNILIWNR 380 (383)
T ss_dssp CCCEEEECTTSSEEEEEETTEEEEEEC
T ss_pred eEEEEEEecCccEEEEecCCcEEEEec
Confidence 56679999995 44556999999985
No 73
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-36 Score=264.59 Aligned_cols=237 Identities=12% Similarity=0.080 Sum_probs=198.2
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEeCCeEEEEeCCCCEEEEeec
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQKDWVYIYDNQGIELHCLKV 89 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~~~~~~~~~~~ 89 (315)
..+|.+++|||||+++|+++.|++|+ |...++.+ -.|...|++++|+|+| .++.+.+|+.++.....+.+
T Consensus 15 ~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l--~gh~~~v~~V~FsPdg------~~~~~~~~~~~~~~~~~~~~ 84 (588)
T 2j04_A 15 EDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDI--NCNSKNLFHVKEFPLE------FENKLDFELAQQNGLLNSQP 84 (588)
T ss_dssp SSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCC--SSBGGGTEEEEEECCC------CCCTTTTSCCCSSCSSTTSC
T ss_pred hccEEEEEECCCCCEEEEEcCCceee--ccccccee--cCCCccEEEEEECCCC------CcceEEEEeCCCceEeecCC
Confidence 78899999999999999999999999 76555443 2488899999999999 56777777766555444456
Q ss_pred CCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCC-----CeEEEEEcCCCCEEEEEcCCCeEEEEcCCCC
Q psy9936 90 LNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKG-----KLSVMTQNPYNACICLGHRNGTVTMWSPTVQ 164 (315)
Q Consensus 90 ~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~-----~v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~ 164 (315)
...|.+++|+|+|.+||+++.||.|++||... .+..+. |.. .+.+++|||||++|++|+.||+|++||+.++
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~ 161 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKN 161 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCC
T ss_pred CCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCC
Confidence 78899999999999999999999999999543 666677 665 4999999999999999999999999999987
Q ss_pred cc-------eeEe----ecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCC---eeEec-cCC-CceeEEEccCC
Q psy9936 165 KP-------LASL----LCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGP---LNTFR-TRT-PINNLAFSQRG 228 (315)
Q Consensus 165 ~~-------~~~~----~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~---~~~~~-~~~-~v~~~~~s~~g 228 (315)
.. +.++ .+|..+|.+++|+|+| +++++.|++|++||+.+. .. ...+. .|. .|.+++|+ +.
T Consensus 162 ~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~-~~~~~~~tL~~~h~~~V~svaFs-g~ 237 (588)
T 2j04_A 162 SENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSAS-SHQPVSRMIQNASRRKITDLKIV-DY 237 (588)
T ss_dssp TTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSS-SSCCCEEEEECCCSSCCCCEEEE-TT
T ss_pred ccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCC-ccccceeeecccccCcEEEEEEE-CC
Confidence 53 5666 5677899999999999 888999999999999887 43 34553 553 69999999 55
Q ss_pred eEEEEcCCEEEecCC----------------Cceee--cccccccccCCcchh
Q psy9936 229 LLATSRGNIVEFLKP----------------PEINF--EPRRKANKAGGSVQR 263 (315)
Q Consensus 229 ~~~~~~~~~i~~~~~----------------~~~~~--~~~~~~~~~~~~~~~ 263 (315)
.++++++++|++|++ ..++| +|++..++.++.++.
T Consensus 238 ~LASa~~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~ 290 (588)
T 2j04_A 238 KVVLTCPGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY 290 (588)
T ss_dssp EEEEECSSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE
T ss_pred EEEEEeCCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC
Confidence 677778999999987 56788 999999999987766
No 74
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.1e-34 Score=252.25 Aligned_cols=233 Identities=12% Similarity=0.207 Sum_probs=198.7
Q ss_pred CCcEEEEEEcC-CCCEEEEEcCCCeEEEEEccCc-------eEEEEec-CCCceeEEEEeecC-cEEEEEe-CCeEEEEe
Q psy9936 10 QFGIYRMNYTK-NGRHLLLGGKRGHVAAFDWVRK-------TLACEMN-VMEEVYDIKWLHLE-TMFAVAQ-KDWVYIYD 78 (315)
Q Consensus 10 ~~~v~~~~~s~-~~~~l~~~~~dg~i~v~~~~~~-------~~~~~~~-~~~~v~~~~~~~~~-~~l~~~~-~~~i~i~~ 78 (315)
..+|++++|+| ++.+|++++.||.|++|++.++ +....+. |...|.+++|+|++ .+|++++ |+.|++||
T Consensus 81 ~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd 160 (402)
T 2aq5_A 81 TAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWD 160 (402)
T ss_dssp SSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEE
T ss_pred CCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEE
Confidence 67899999999 9999999999999999999887 4455555 88999999999997 5777766 89999999
Q ss_pred CCC-CEEEEe---ecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEe-ccCCCC-eEEEEEcCCCCEEEEE--
Q psy9936 79 NQG-IELHCL---KVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDF-SAKKGK-LSVMTQNPYNACICLG-- 150 (315)
Q Consensus 79 ~~~-~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~-~~~~~~-v~~~~~~p~~~~l~~~-- 150 (315)
+.. ..+..+ .|...|.+++|+|++.+|++++.|+.|++||+++++.+..+ ..|.+. +..+.|+|++.+|++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ 240 (402)
T 2aq5_A 161 VGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFS 240 (402)
T ss_dssp TTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEEC
T ss_pred CCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEecc
Confidence 954 444445 26689999999999999999999999999999999999888 678765 8999999999999999
Q ss_pred -cCCCeEEEEcCCCCcc-eeEee-cccccEEEEEECCCCCEEEE-eeCCCcEEEEEccCCCCC-eeEecc---CCCceeE
Q psy9936 151 -HRNGTVTMWSPTVQKP-LASLL-CHKAGIQSVAVNHTGTYMAT-SAGDSQLRIWDVRNLEGP-LNTFRT---RTPINNL 222 (315)
Q Consensus 151 -~~d~~i~i~d~~~~~~-~~~~~-~~~~~i~~~~~sp~g~~l~~-~~~d~~i~iwd~~~~~~~-~~~~~~---~~~v~~~ 222 (315)
+.|+.|++||+++++. +.... .|...+.+++|+|++.+|++ |+.|+.|++||+.++ .+ +..+.. ..++.++
T Consensus 241 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~-~~~~~~l~~~~~~~~v~~~ 319 (402)
T 2aq5_A 241 RMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSE-APFLHYLSMFSSKESQRGM 319 (402)
T ss_dssp TTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSS-TTCEEEEEEECCSSCCSEE
T ss_pred CCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCC-CcceEeecccccCCcccce
Confidence 7999999999998754 33333 47788999999999999875 557999999999987 53 444433 3579999
Q ss_pred EEccCCeEEEEcCCEEEecCC
Q psy9936 223 AFSQRGLLATSRGNIVEFLKP 243 (315)
Q Consensus 223 ~~s~~g~~~~~~~~~i~~~~~ 243 (315)
+|+|++.++++.++.+++|+.
T Consensus 320 ~~sp~~~~~~s~~~~~~~~~l 340 (402)
T 2aq5_A 320 GYMPKRGLEVNKCEIARFYKL 340 (402)
T ss_dssp EECCGGGSCGGGTEEEEEEEE
T ss_pred EEecccccceecceeEEEEEc
Confidence 999999988889999999986
No 75
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.3e-35 Score=253.46 Aligned_cols=237 Identities=16% Similarity=0.213 Sum_probs=208.3
Q ss_pred EEeeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCc---------------eeEEEEeecCcEEE
Q psy9936 5 FDLDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEE---------------VYDIKWLHLETMFA 67 (315)
Q Consensus 5 ~~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~---------------v~~~~~~~~~~~l~ 67 (315)
..+.. ...|.+++|+|++++|++++.||.|++||+.+++....+. +... +.++.|+|++.+++
T Consensus 143 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (425)
T 1r5m_A 143 NVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVI 222 (425)
T ss_dssp EEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEE
T ss_pred eeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEE
Confidence 34444 7889999999999999999999999999999999888877 4444 89999999988777
Q ss_pred EEeCCeEEEEeCCC-CEEEEe-ecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCC
Q psy9936 68 VAQKDWVYIYDNQG-IELHCL-KVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNA 145 (315)
Q Consensus 68 ~~~~~~i~i~~~~~-~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~ 145 (315)
++.++.|++||+.. ..+..+ .|...|.+++|+|++.+|++++.|+.|++||+.+++.+..+..|...+.+++|+|++
T Consensus 223 ~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~- 301 (425)
T 1r5m_A 223 PGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD- 301 (425)
T ss_dssp ECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-
T ss_pred EcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-
Confidence 77799999999954 333333 466899999999999999999999999999999999888898899999999999999
Q ss_pred EEEEEcCCCeEEEEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCC-----------------
Q psy9936 146 CICLGHRNGTVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEG----------------- 208 (315)
Q Consensus 146 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~----------------- 208 (315)
++++++.|+.|++||+++++.+..+..|...|.+++|+|++++|++++.||.|++||+.+. .
T Consensus 302 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~-~~~~~~~~~~~~~~~~~~ 380 (425)
T 1r5m_A 302 KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKL-NSKSRSLYGNRDGILNPL 380 (425)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHH-HC--------------CE
T ss_pred EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCC-ccceeeeecccccccCcc
Confidence 9999999999999999999999999999999999999999999999999999999999987 5
Q ss_pred ---CeeEeccC--C-CceeEEEccCCeE--EEEcCCEEEecCC
Q psy9936 209 ---PLNTFRTR--T-PINNLAFSQRGLL--ATSRGNIVEFLKP 243 (315)
Q Consensus 209 ---~~~~~~~~--~-~v~~~~~s~~g~~--~~~~~~~i~~~~~ 243 (315)
++..+..| . +|++++|+|++.+ +++.|+.|++|+.
T Consensus 381 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 423 (425)
T 1r5m_A 381 PIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAI 423 (425)
T ss_dssp ECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEEC
T ss_pred cchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEee
Confidence 67778777 5 7999999999953 4556899999974
No 76
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3e-34 Score=270.56 Aligned_cols=257 Identities=12% Similarity=0.144 Sum_probs=225.9
Q ss_pred EEeeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCCC
Q psy9936 5 FDLDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQG 81 (315)
Q Consensus 5 ~~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~ 81 (315)
..+.. ..+|.+++|+|++++|++++.||.|++||+.+++....+. |...|.+++|+|++.+|++++ |+.|++|++.+
T Consensus 49 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~ 128 (814)
T 3mkq_A 49 RSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWEN 128 (814)
T ss_dssp EEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGG
T ss_pred EEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCC
Confidence 34555 7889999999999999999999999999999999888887 889999999999999888876 79999999954
Q ss_pred C-E-EEEe-ecCCceEEEEEcC-CCceEEEEcCCCeEEEEEccCCeEEEEeccCC-CCeEEEEEcC--CCCEEEEEcCCC
Q psy9936 82 I-E-LHCL-KVLNKVTRMEFLP-YHFLLATASEEGYLSWLDTSIGKIVSDFSAKK-GKLSVMTQNP--YNACICLGHRNG 154 (315)
Q Consensus 82 ~-~-~~~~-~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-~~v~~~~~~p--~~~~l~~~~~d~ 154 (315)
. . ...+ .|...|.+++|+| ++..|++++.||.|++||+.++.....+..+. ..+..++|+| ++.+|++++.||
T Consensus 129 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg 208 (814)
T 3mkq_A 129 NWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDL 208 (814)
T ss_dssp TSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTS
T ss_pred CceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCC
Confidence 3 3 3333 3668899999999 78999999999999999998887777766554 7899999999 999999999999
Q ss_pred eEEEEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-CceeEEEccCCe---E
Q psy9936 155 TVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-PINNLAFSQRGL---L 230 (315)
Q Consensus 155 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~g~---~ 230 (315)
.|++||+++++++..+.+|...|.+++|+|++.+|++++.||.|++||+.++ ..+..+..+. .+.+++|+|+|. +
T Consensus 209 ~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~ 287 (814)
T 3mkq_A 209 TIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY-KVEKTLNVGLERSWCIATHPTGRKNYI 287 (814)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC-SEEEEECCSSSSEEEEEECTTCGGGEE
T ss_pred EEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-cEEEEeecCCCcEEEEEEccCCCceEE
Confidence 9999999999999999999999999999999999999999999999999998 8888887765 699999999983 6
Q ss_pred EEEcCCEEEecCC----CceeecccccccccCCcch
Q psy9936 231 ATSRGNIVEFLKP----PEINFEPRRKANKAGGSVQ 262 (315)
Q Consensus 231 ~~~~~~~i~~~~~----~~~~~~~~~~~~~~~~~~~ 262 (315)
+++.++.+..|+. ..+.++|+++.++.++...
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 323 (814)
T 3mkq_A 288 ASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNA 323 (814)
T ss_dssp EEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTS
T ss_pred EEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccc
Confidence 6677888888876 6788999999998776543
No 77
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.9e-34 Score=246.82 Aligned_cols=230 Identities=13% Similarity=0.202 Sum_probs=197.9
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCC--CCEEE
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQ--GIELH 85 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~--~~~~~ 85 (315)
...|.+++|+|++++|++++.||.|++||+.+++....+. |...|.+++| ++.+|++++ |+.|++||+. .....
T Consensus 134 ~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~ 211 (401)
T 4aez_A 134 STYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIG 211 (401)
T ss_dssp TCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEE
T ss_pred CCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceee
Confidence 6789999999999999999999999999999999888886 8889999999 456777665 8999999995 33344
Q ss_pred Ee-ecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCC-EEEEEc--CCCeEEEEcC
Q psy9936 86 CL-KVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNA-CICLGH--RNGTVTMWSP 161 (315)
Q Consensus 86 ~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~-~l~~~~--~d~~i~i~d~ 161 (315)
.+ .|...|.+++|+|++.+|++++.|+.|++||+.+++.+..+..|...|.+++|+|++. ++++++ .|+.|++||+
T Consensus 212 ~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~ 291 (401)
T 4aez_A 212 TLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNA 291 (401)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEET
T ss_pred EEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEEC
Confidence 44 4668999999999999999999999999999999999999999999999999999775 666654 7999999999
Q ss_pred CCCcceeEeecccccEEEEEECCCCCEEEEe--eCCCcEEEEEccCCCCCeeE--eccCC-CceeEEEccCCeE--EEEc
Q psy9936 162 TVQKPLASLLCHKAGIQSVAVNHTGTYMATS--AGDSQLRIWDVRNLEGPLNT--FRTRT-PINNLAFSQRGLL--ATSR 234 (315)
Q Consensus 162 ~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~--~~d~~i~iwd~~~~~~~~~~--~~~~~-~v~~~~~s~~g~~--~~~~ 234 (315)
++++++..+. +...|.+++|+|++.+|+++ +.||.|++||+.++ ..... +..|. .|.+++|+|+|.+ .++.
T Consensus 292 ~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~-~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~ 369 (401)
T 4aez_A 292 ATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSS-GLTKQVDIPAHDTRVLYSALSPDGRILSTAAS 369 (401)
T ss_dssp TTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETT-EEEEEEEEECCSSCCCEEEECTTSSEEEEECT
T ss_pred CCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCc-cceeEEEecCCCCCEEEEEECCCCCEEEEEeC
Confidence 9999888886 67889999999999999994 48999999999986 44443 44554 6999999999953 3446
Q ss_pred CCEEEecCC
Q psy9936 235 GNIVEFLKP 243 (315)
Q Consensus 235 ~~~i~~~~~ 243 (315)
|+.|++|+.
T Consensus 370 dg~i~iw~~ 378 (401)
T 4aez_A 370 DENLKFWRV 378 (401)
T ss_dssp TSEEEEEEC
T ss_pred CCcEEEEEC
Confidence 899999986
No 78
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.2e-34 Score=246.33 Aligned_cols=232 Identities=16% Similarity=0.194 Sum_probs=189.8
Q ss_pred CCcEEEEEEcCC---CCEEEEEcCCCeEEEEEccC-ceEE-EEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCCCC
Q psy9936 10 QFGIYRMNYTKN---GRHLLLGGKRGHVAAFDWVR-KTLA-CEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGI 82 (315)
Q Consensus 10 ~~~v~~~~~s~~---~~~l~~~~~dg~i~v~~~~~-~~~~-~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~ 82 (315)
...|++++|+|+ |++|++++.||.|++||+.+ +... ..+. |...|.+++|+|++++|++++ |+.|++||+...
T Consensus 39 ~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 118 (368)
T 3mmy_A 39 DDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSN 118 (368)
T ss_dssp SSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred CCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCC
Confidence 789999999999 69999999999999999986 5444 4444 889999999999999988886 899999999654
Q ss_pred E-EEEeecCCceEEEEE--cCCCceEEEEcCCCeEEEEEccCCeEEEEeccCC---------------------------
Q psy9936 83 E-LHCLKVLNKVTRMEF--LPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKK--------------------------- 132 (315)
Q Consensus 83 ~-~~~~~~~~~v~~~~~--~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~--------------------------- 132 (315)
. +....|...|.+++| +|++.+|++++.||.|++||+++++.+..+..+.
T Consensus 119 ~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 198 (368)
T 3mmy_A 119 QAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLE 198 (368)
T ss_dssp EEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECS
T ss_pred CceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEec
Confidence 4 444567799999999 8999999999999999999999887666554332
Q ss_pred --------------CCeEEEEEcCCCCE----EEEEcCCCeEEEEcCCCC---cceeEeecccc------------cEEE
Q psy9936 133 --------------GKLSVMTQNPYNAC----ICLGHRNGTVTMWSPTVQ---KPLASLLCHKA------------GIQS 179 (315)
Q Consensus 133 --------------~~v~~~~~~p~~~~----l~~~~~d~~i~i~d~~~~---~~~~~~~~~~~------------~i~~ 179 (315)
..+.++++.+++.. +++++.|+.|++||++.. ..+..+.+|.. +|++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 278 (368)
T 3mmy_A 199 NQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNG 278 (368)
T ss_dssp SSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEE
T ss_pred cccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEE
Confidence 22344444444433 999999999999999987 56777777776 7999
Q ss_pred EEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-CceeEEEccCCeE--EEEcCCEEEecC
Q psy9936 180 VAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-PINNLAFSQRGLL--ATSRGNIVEFLK 242 (315)
Q Consensus 180 ~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~g~~--~~~~~~~i~~~~ 242 (315)
++|+|++++|++++.||.|++||+.++ .++..+..|. +|++++|+|+|.+ +++.|+..+.|.
T Consensus 279 ~~~sp~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~ 343 (368)
T 3mmy_A 279 IAFHPVHGTLATVGSDGRFSFWDKDAR-TKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHE 343 (368)
T ss_dssp EEECTTTCCEEEEETTSCEEEEETTTT-EEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGG
T ss_pred EEEecCCCEEEEEccCCeEEEEECCCC-cEEEEecCCCCCceEEEECCCCCeEEEEeccccccccc
Confidence 999999999999999999999999998 8888888765 6999999999953 334455444443
No 79
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.2e-33 Score=250.17 Aligned_cols=233 Identities=12% Similarity=0.151 Sum_probs=201.8
Q ss_pred EEeeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEee--cCcEEEEEe-CCeEEEEeC
Q psy9936 5 FDLDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLH--LETMFAVAQ-KDWVYIYDN 79 (315)
Q Consensus 5 ~~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~--~~~~l~~~~-~~~i~i~~~ 79 (315)
..+.. ..+|.+++|+|++ +|++|+.||.|++||+.+++....+. |...|.+++|++ ++.++++++ |+.|++||+
T Consensus 156 ~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~ 234 (464)
T 3v7d_B 156 LQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKL 234 (464)
T ss_dssp EEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEEC
T ss_pred EEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeC
Confidence 34555 7899999999988 99999999999999999999988887 889999999995 677888776 899999998
Q ss_pred CCCE------------------------EEE-eecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCC
Q psy9936 80 QGIE------------------------LHC-LKVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGK 134 (315)
Q Consensus 80 ~~~~------------------------~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~ 134 (315)
.... ... ..|...+.++ ++++.++++++.|+.|++||+.+++.+..+.+|...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~ 312 (464)
T 3v7d_B 235 PKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDR 312 (464)
T ss_dssp CCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred CCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCC
Confidence 5432 112 2344566665 677899999999999999999999999999999999
Q ss_pred eEEEEEcCCCCEEEEEcCCCeEEEEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEec
Q psy9936 135 LSVMTQNPYNACICLGHRNGTVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFR 214 (315)
Q Consensus 135 v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 214 (315)
|.+++|+|+++++++|+.|+.|++||+++++++..+.+|...|.+++|+ +.+|++++.||.|++||+.++ .......
T Consensus 313 v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~-~~~~~~~ 389 (464)
T 3v7d_B 313 IYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDY-SRKFSYH 389 (464)
T ss_dssp EEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTC-CEEEEEE
T ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCC-ceeeeec
Confidence 9999999999999999999999999999999999999999999999997 579999999999999999987 6666555
Q ss_pred cCCCceeEEEccCCe-EEEEcCCEEEecCC
Q psy9936 215 TRTPINNLAFSQRGL-LATSRGNIVEFLKP 243 (315)
Q Consensus 215 ~~~~v~~~~~s~~g~-~~~~~~~~i~~~~~ 243 (315)
....+..++|+|++. +++++++.|++|+.
T Consensus 390 ~~~~~~~~~~~~~~~~l~~~~dg~i~iwd~ 419 (464)
T 3v7d_B 390 HTNLSAITTFYVSDNILVSGSENQFNIYNL 419 (464)
T ss_dssp CTTCCCEEEEEECSSEEEEEETTEEEEEET
T ss_pred CCCCccEEEEEeCCCEEEEecCCeEEEEEC
Confidence 555688899999995 55556999999987
No 80
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.6e-34 Score=251.24 Aligned_cols=249 Identities=15% Similarity=0.174 Sum_probs=205.5
Q ss_pred cEEEEEEcCCCCEEE-EEcCCCeEEEEEccCceE----EEEec-CCCceeEEEEee-cCcEEEEEe-CCeEEEEeCCCC-
Q psy9936 12 GIYRMNYTKNGRHLL-LGGKRGHVAAFDWVRKTL----ACEMN-VMEEVYDIKWLH-LETMFAVAQ-KDWVYIYDNQGI- 82 (315)
Q Consensus 12 ~v~~~~~s~~~~~l~-~~~~dg~i~v~~~~~~~~----~~~~~-~~~~v~~~~~~~-~~~~l~~~~-~~~i~i~~~~~~- 82 (315)
....++++|+...++ +++.+|.|+||++..... ...+. |...|.+++|+| ++.+|++++ |+.|++|++...
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~ 115 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG 115 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTC
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCC
Confidence 345678888776444 578899999999865432 22333 888999999999 899998887 899999998542
Q ss_pred -------EEEEe-ecCCceEEEEEcCCC-ceEEEEcCCCeEEEEEccCCeEEEEe--ccCCCCeEEEEEcCCCCEEEEEc
Q psy9936 83 -------ELHCL-KVLNKVTRMEFLPYH-FLLATASEEGYLSWLDTSIGKIVSDF--SAKKGKLSVMTQNPYNACICLGH 151 (315)
Q Consensus 83 -------~~~~~-~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~~~~~--~~~~~~v~~~~~~p~~~~l~~~~ 151 (315)
.+..+ .|...|.+++|+|++ .+|++++.|+.|++||+.+++.+..+ ..|...|.+++|+|++++|++++
T Consensus 116 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 195 (402)
T 2aq5_A 116 LVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSC 195 (402)
T ss_dssp CSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEE
T ss_pred CccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEe
Confidence 33333 467899999999998 69999999999999999999999998 78999999999999999999999
Q ss_pred CCCeEEEEcCCCCcceeEe-eccccc-EEEEEECCCCCEEEEe---eCCCcEEEEEccCCCCCeeEec--cCCCceeEEE
Q psy9936 152 RNGTVTMWSPTVQKPLASL-LCHKAG-IQSVAVNHTGTYMATS---AGDSQLRIWDVRNLEGPLNTFR--TRTPINNLAF 224 (315)
Q Consensus 152 ~d~~i~i~d~~~~~~~~~~-~~~~~~-i~~~~~sp~g~~l~~~---~~d~~i~iwd~~~~~~~~~~~~--~~~~v~~~~~ 224 (315)
.|+.|++||+++++.+..+ .+|.+. +.++.|+|++.+|++| +.|+.|++||+++...++.... .+..+.+++|
T Consensus 196 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 275 (402)
T 2aq5_A 196 RDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFF 275 (402)
T ss_dssp TTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEE
T ss_pred cCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEE
Confidence 9999999999999998888 678775 8999999999999999 7999999999998734344443 3457999999
Q ss_pred ccCCe-E-EEE-cCCEEEecCC-------------------CceeecccccccccCCc
Q psy9936 225 SQRGL-L-ATS-RGNIVEFLKP-------------------PEINFEPRRKANKAGGS 260 (315)
Q Consensus 225 s~~g~-~-~~~-~~~~i~~~~~-------------------~~~~~~~~~~~~~~~~~ 260 (315)
+|++. + +++ .|+.|++|+. .+++|+|++..+++++.
T Consensus 276 s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s~~~ 333 (402)
T 2aq5_A 276 DPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNKCE 333 (402)
T ss_dssp ETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGGGTE
T ss_pred cCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecccccceecce
Confidence 99994 3 344 4899998865 57889999999887544
No 81
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2.9e-34 Score=251.85 Aligned_cols=235 Identities=18% Similarity=0.264 Sum_probs=198.0
Q ss_pred CCcEEEEEEcCC-CCEEEEEcCCCeEEEEEccC----------ceEEEEec-CCCceeEEEEeecCc-EEEEEe-CCeEE
Q psy9936 10 QFGIYRMNYTKN-GRHLLLGGKRGHVAAFDWVR----------KTLACEMN-VMEEVYDIKWLHLET-MFAVAQ-KDWVY 75 (315)
Q Consensus 10 ~~~v~~~~~s~~-~~~l~~~~~dg~i~v~~~~~----------~~~~~~~~-~~~~v~~~~~~~~~~-~l~~~~-~~~i~ 75 (315)
.+.|++++|+|+ +.+|++++.+|.|++|++.+ ......+. |...+.+++|+|++. +|++++ ||.|+
T Consensus 128 ~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~ 207 (430)
T 2xyi_A 128 EGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTIC 207 (430)
T ss_dssp SSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEE
T ss_pred CCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEE
Confidence 789999999997 67999999999999999986 45555555 888999999999987 777776 89999
Q ss_pred EEeCCCC-----E----EEEeecCCceEEEEEcC-CCceEEEEcCCCeEEEEEccCC---eEEEEeccCCCCeEEEEEcC
Q psy9936 76 IYDNQGI-----E----LHCLKVLNKVTRMEFLP-YHFLLATASEEGYLSWLDTSIG---KIVSDFSAKKGKLSVMTQNP 142 (315)
Q Consensus 76 i~~~~~~-----~----~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~---~~~~~~~~~~~~v~~~~~~p 142 (315)
+|++... . .....|...|.+++|+| ++.+|++++.||.|++||++++ +.+..+..|...|++++|+|
T Consensus 208 vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p 287 (430)
T 2xyi_A 208 LWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNP 287 (430)
T ss_dssp EEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECS
T ss_pred EEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCC
Confidence 9999541 1 12234668899999999 6789999999999999999977 56777888999999999999
Q ss_pred CCC-EEEEEcCCCeEEEEcCCC-CcceeEeecccccEEEEEECCCCC-EEEEeeCCCcEEEEEccCCC------------
Q psy9936 143 YNA-CICLGHRNGTVTMWSPTV-QKPLASLLCHKAGIQSVAVNHTGT-YMATSAGDSQLRIWDVRNLE------------ 207 (315)
Q Consensus 143 ~~~-~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~i~~~~~sp~g~-~l~~~~~d~~i~iwd~~~~~------------ 207 (315)
++. +|++|+.||.|++||+++ ..++..+..|...|++++|+|++. +|++++.|+.|++||+....
T Consensus 288 ~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 367 (430)
T 2xyi_A 288 YSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 367 (430)
T ss_dssp SCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCC
T ss_pred CCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCC
Confidence 987 688999999999999998 567888999999999999999985 79999999999999998731
Q ss_pred -CCeeEeccCC-CceeEEEccCCe-EE--EEcCCEEEecCCC
Q psy9936 208 -GPLNTFRTRT-PINNLAFSQRGL-LA--TSRGNIVEFLKPP 244 (315)
Q Consensus 208 -~~~~~~~~~~-~v~~~~~s~~g~-~~--~~~~~~i~~~~~~ 244 (315)
.++..+..|. .|++++|+|++. ++ ++.|+.|++|++.
T Consensus 368 ~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 368 PELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp TTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred cceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 3445555555 599999999984 43 4458999999863
No 82
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=5.7e-34 Score=244.55 Aligned_cols=239 Identities=11% Similarity=0.132 Sum_probs=199.2
Q ss_pred EEEeeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEE---ecCCCceeEEEEeecCcEEEEEe-CCeEEEEe
Q psy9936 4 QFDLDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACE---MNVMEEVYDIKWLHLETMFAVAQ-KDWVYIYD 78 (315)
Q Consensus 4 ~~~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~ 78 (315)
...+.. ...|.+++|+|++++|++++.||.|++||+.+++.... ..|...|.+++|+|++++|++++ ++.|++||
T Consensus 45 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d 124 (372)
T 1k8k_C 45 VHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICY 124 (372)
T ss_dssp EEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEE
T ss_pred eeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEE
Confidence 445555 78999999999999999999999999999998875444 33788999999999999998887 89999999
Q ss_pred CCCCE----EEEe--ecCCceEEEEEcCCCceEEEEcCCCeEEEEEc------------------cCCeEEEEeccCCCC
Q psy9936 79 NQGIE----LHCL--KVLNKVTRMEFLPYHFLLATASEEGYLSWLDT------------------SIGKIVSDFSAKKGK 134 (315)
Q Consensus 79 ~~~~~----~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~------------------~~~~~~~~~~~~~~~ 134 (315)
+.... ...+ .|...|.+++|+|++.+|++++.||.|++||+ ..++.+..+..|...
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (372)
T 1k8k_C 125 FEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGW 204 (372)
T ss_dssp EETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSC
T ss_pred ecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCe
Confidence 84332 2222 34688999999999999999999999999995 467888889899999
Q ss_pred eEEEEEcCCCCEEEEEcCCCeEEEEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccC--CC-----
Q psy9936 135 LSVMTQNPYNACICLGHRNGTVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRN--LE----- 207 (315)
Q Consensus 135 v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~--~~----- 207 (315)
+.+++|+|++++|++++.|+.|++||+++++++..+..|..+|.+++|+|++.+|++| .|+.|++|++.+ +.
T Consensus 205 v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~ 283 (372)
T 1k8k_C 205 VHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGG 283 (372)
T ss_dssp EEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECC
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEee
Confidence 9999999999999999999999999999999999999999999999999999988887 999999999987 20
Q ss_pred --------------------------CCe------eEe-ccCC-CceeEEEc-cCC---eE--EEEcCCEEEecCC
Q psy9936 208 --------------------------GPL------NTF-RTRT-PINNLAFS-QRG---LL--ATSRGNIVEFLKP 243 (315)
Q Consensus 208 --------------------------~~~------~~~-~~~~-~v~~~~~s-~~g---~~--~~~~~~~i~~~~~ 243 (315)
... ..+ ..|. +|++++|. ++| .+ .++.|+.|++|+.
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~ 359 (372)
T 1k8k_C 284 RLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDV 359 (372)
T ss_dssp CCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEH
T ss_pred ccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEe
Confidence 000 222 2444 69999976 564 33 3445999999984
No 83
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.6e-34 Score=251.41 Aligned_cols=256 Identities=15% Similarity=0.261 Sum_probs=214.8
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec---CCCceeEEEEeecCcEEEEEe-CCeEEEEeCCC-CEE
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN---VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQG-IEL 84 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~-~~~ 84 (315)
+..+..|+||++ +.||+|. |++|+|||..+++....+. |...|++++|+|+|++|++|+ |+.|++||+.. ..+
T Consensus 105 d~y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~ 182 (420)
T 4gga_A 105 DYYLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL 182 (420)
T ss_dssp CTTCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred cccceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEE
Confidence 345677999986 4788775 8999999999999877664 567899999999999999887 89999999954 444
Q ss_pred EEe-ecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCC-eEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCeEEEEcCC
Q psy9936 85 HCL-KVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIG-KIVSDFSAKKGKLSVMTQNPYNACICLGHRNGTVTMWSPT 162 (315)
Q Consensus 85 ~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~-~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~~ 162 (315)
..+ .|...+.+++++ +.+|++|+.|+.+.+||.... ..+..+.+|...+..+.|+|+++++++++.|+.+++||..
T Consensus 183 ~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~ 260 (420)
T 4gga_A 183 RNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSA 260 (420)
T ss_dssp EEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred EEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeec
Confidence 444 355778887765 678999999999999998764 5667788999999999999999999999999999999998
Q ss_pred CCc----ceeEeecccccEEEEEECCCCC-EEEE--eeCCCcEEEEEccCCCCCeeEeccCCCceeEEEccCCe--EEEE
Q psy9936 163 VQK----PLASLLCHKAGIQSVAVNHTGT-YMAT--SAGDSQLRIWDVRNLEGPLNTFRTRTPINNLAFSQRGL--LATS 233 (315)
Q Consensus 163 ~~~----~~~~~~~~~~~i~~~~~sp~g~-~l~~--~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~--~~~~ 233 (315)
+++ .+.....|...|.+++|+|++. ++++ |+.|++|++||+.++ .++..+..+..+.++.|+|++. ++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~-~~~~~~~~~~~v~~~~~~~~~~~lv~~s 339 (420)
T 4gga_A 261 PGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG-ACLSAVDAHSQVCSILWSPHYKELISGH 339 (420)
T ss_dssp CCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTT-EEEEEEECSSCEEEEEEETTTTEEEEEE
T ss_pred cccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcc-ccceeeccccceeeeeecCCCCeEEEEE
Confidence 764 3556678999999999999755 5554 457999999999999 8888888888999999999984 3333
Q ss_pred --cCCEEEecCC----------------CceeecccccccccCCcchhhhhhhhh
Q psy9936 234 --RGNIVEFLKP----------------PEINFEPRRKANKAGGSVQRAKVKKIV 270 (315)
Q Consensus 234 --~~~~i~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (315)
.|+.|++|+. ++++|+|+++++++++.|+.++.+...
T Consensus 340 g~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 340 GFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 394 (420)
T ss_dssp CTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred ecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 4789999976 678999999999999999999988754
No 84
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.5e-35 Score=252.25 Aligned_cols=193 Identities=11% Similarity=0.182 Sum_probs=160.8
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCce---EEEEe-cCCCceeEEEEeecCcEEEEEe-CCeEEEEeCCCCE-
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKT---LACEM-NVMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGIE- 83 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~---~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~~- 83 (315)
...|.+++|+|++++|++++.||.|++||+.+++ ....+ .|...|.+++|+|++++|++++ |+.|++||+....
T Consensus 55 ~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 134 (377)
T 3dwl_C 55 DKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQEND 134 (377)
T ss_dssp SSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----
T ss_pred CceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCccc
Confidence 6789999999999999999999999999999877 34444 4889999999999999888876 8999999996543
Q ss_pred ---EEEee--cCCceEEEEEcCCCceEEEEcCCCeEEEEEcc------------------CCeEEEEeccCCCCeEEEEE
Q psy9936 84 ---LHCLK--VLNKVTRMEFLPYHFLLATASEEGYLSWLDTS------------------IGKIVSDFSAKKGKLSVMTQ 140 (315)
Q Consensus 84 ---~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~------------------~~~~~~~~~~~~~~v~~~~~ 140 (315)
...+. |...|.+++|+|++.+|++++.|+.|++||+. .++.+..+ .|...|.+++|
T Consensus 135 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~ 213 (377)
T 3dwl_C 135 WWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGF 213 (377)
T ss_dssp CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEE
T ss_pred ceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEE
Confidence 34443 67899999999999999999999999999985 34566666 89999999999
Q ss_pred cCCCCEEEEEcCCCeEEEEcCCCCcc----eeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEcc
Q psy9936 141 NPYNACICLGHRNGTVTMWSPTVQKP----LASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVR 204 (315)
Q Consensus 141 ~p~~~~l~~~~~d~~i~i~d~~~~~~----~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~ 204 (315)
+|++++|++++.|+.|++||+++++. +..+.+|..+|.+++|+|+|++|++++.++.+ +|+..
T Consensus 214 sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 214 SPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp CTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 99999999999999999999999987 78888999999999999999999998877655 67664
No 85
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.4e-35 Score=248.98 Aligned_cols=242 Identities=9% Similarity=0.025 Sum_probs=191.4
Q ss_pred EEcCCCCEEEEEcCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEeCCeEEEEeCCCC---------E-EEE
Q psy9936 17 NYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQKDWVYIYDNQGI---------E-LHC 86 (315)
Q Consensus 17 ~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~~~~---------~-~~~ 86 (315)
.+.+++.+|++|+.||.|++||+.+++.+..+. ...|.++.|+|+ ++.++.|+.|++|+..+. . +..
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~-~~~v~~~~~~~~--~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~ 119 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT-TPNPRTGGEHPA--IISRGPCNRLLLLYPGNQITILDSKTNKVLRE 119 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE-EECCCTTCCCCS--EEEECSTTEEEEEETTTEEEEEETTTCCEEEE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe-cCCceeeeeCCc--eEEecCCCeEEEEEccCceEEeecCCcceeEE
Confidence 345678899999999999999999998877776 456788888888 444445899999976532 2 222
Q ss_pred e--ecCCceEEEEEcC--CCceEEEEcCCCeEEEEEccCCeEEEEec-cCCCCeEEEEEcCCCCEEEEEcCCCeEEEEcC
Q psy9936 87 L--KVLNKVTRMEFLP--YHFLLATASEEGYLSWLDTSIGKIVSDFS-AKKGKLSVMTQNPYNACICLGHRNGTVTMWSP 161 (315)
Q Consensus 87 ~--~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~ 161 (315)
. .|...|.+++|+| ++.++++++.||.|++||+++++...... .+...+.+++|+|+|.+|++|+.|+.|++||+
T Consensus 120 ~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~ 199 (343)
T 3lrv_A 120 IEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNL 199 (343)
T ss_dssp EECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEES
T ss_pred eecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 2 3447899999999 99999999999999999999998876654 34557999999999999999999999999999
Q ss_pred CCCcce-eEeec-ccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEecc---CC-Cce--eEEEccCCeEEEE
Q psy9936 162 TVQKPL-ASLLC-HKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRT---RT-PIN--NLAFSQRGLLATS 233 (315)
Q Consensus 162 ~~~~~~-~~~~~-~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~---~~-~v~--~~~~s~~g~~~~~ 233 (315)
++++.+ ..+.. |..+|++++|+|+|.+|++++ |+.|++||+++. .++..+.. +. ++. +++|+|+|.++++
T Consensus 200 ~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 277 (343)
T 3lrv_A 200 SSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKD-VGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIA 277 (343)
T ss_dssp SCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSS-TTCBSSCCCBC-----CCEEEEECTTSSEEEE
T ss_pred CCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCC-CcceeecccccccccccceEEEECCCCCEEEE
Confidence 999887 78887 999999999999999999999 459999999988 66555443 22 343 5999999976555
Q ss_pred --c-CCEEEecCC------------Cceeecc---cccccccCCcchh
Q psy9936 234 --R-GNIVEFLKP------------PEINFEP---RRKANKAGGSVQR 263 (315)
Q Consensus 234 --~-~~~i~~~~~------------~~~~~~~---~~~~~~~~~~~~~ 263 (315)
+ ++.+++|+. ..+.|.| +...++.++.++.
T Consensus 278 ~s~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~ 325 (343)
T 3lrv_A 278 YSNESNSLTIYKFDKKTKNWTKDEESALCLQSDTADFTDMDVVCGDGG 325 (343)
T ss_dssp EETTTTEEEEEEECTTTCSEEEEEEEECCC----CCCCEEEEEEETTE
T ss_pred ecCCCCcEEEEEEcccccceEecCceeEecCccccccceeEEEecCCc
Confidence 6 999999955 1466777 6677776666654
No 86
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=5.6e-34 Score=237.88 Aligned_cols=219 Identities=13% Similarity=0.147 Sum_probs=184.4
Q ss_pred CCCceeEEEEeecCcEEEEEe-CCeEEEEeCCC---CEEEEe-ecCCceEEEEEcCC--CceEEEEcCCCeEEEEEccCC
Q psy9936 50 VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQG---IELHCL-KVLNKVTRMEFLPY--HFLLATASEEGYLSWLDTSIG 122 (315)
Q Consensus 50 ~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~---~~~~~~-~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~ 122 (315)
|.+.|.+++|+|+|++|++++ |+.|++|++.+ ..+..+ .|..+|.+++|+|+ +.+|++++.|++|++||+.++
T Consensus 8 h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~ 87 (297)
T 2pm7_B 8 HNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENG 87 (297)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSS
T ss_pred CcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCC
Confidence 888999999999999999887 89999999853 233344 46789999999864 889999999999999999877
Q ss_pred e--EEEEeccCCCCeEEEEEcCC--CCEEEEEcCCCeEEEEcCCCCc--ceeEeecccccEEEEEECCC-----------
Q psy9936 123 K--IVSDFSAKKGKLSVMTQNPY--NACICLGHRNGTVTMWSPTVQK--PLASLLCHKAGIQSVAVNHT----------- 185 (315)
Q Consensus 123 ~--~~~~~~~~~~~v~~~~~~p~--~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~i~~~~~sp~----------- 185 (315)
+ .+..+..|...|.+++|+|+ |.+|++++.|+.|++||++++. ....+.+|...|.+++|+|+
T Consensus 88 ~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~ 167 (297)
T 2pm7_B 88 RWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGT 167 (297)
T ss_dssp CBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC----------
T ss_pred ceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCC
Confidence 4 55667789999999999998 8899999999999999998763 24567789999999999997
Q ss_pred --CCEEEEeeCCCcEEEEEccCCCC----CeeEeccCC-CceeEEEccCC---eEE--EEcCCEEEecCC----------
Q psy9936 186 --GTYMATSAGDSQLRIWDVRNLEG----PLNTFRTRT-PINNLAFSQRG---LLA--TSRGNIVEFLKP---------- 243 (315)
Q Consensus 186 --g~~l~~~~~d~~i~iwd~~~~~~----~~~~~~~~~-~v~~~~~s~~g---~~~--~~~~~~i~~~~~---------- 243 (315)
+++|++|+.|++|++||++++ . +...+..|. .|.+++|+|++ .++ ++.|++|++|++
T Consensus 168 ~~~~~l~sgs~D~~v~lwd~~~~-~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~ 246 (297)
T 2pm7_B 168 KESRKFVTGGADNLVKIWKYNSD-AQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKT 246 (297)
T ss_dssp --CCEEEEEETTSCEEEEEEETT-TTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEE
T ss_pred CCcceEEEEcCCCcEEEEEEcCC-CceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCcccee
Confidence 579999999999999999886 4 445666776 69999999984 433 446999999964
Q ss_pred -----------CceeecccccccccCCcchhhhhhhh
Q psy9936 244 -----------PEINFEPRRKANKAGGSVQRAKVKKI 269 (315)
Q Consensus 244 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (315)
.+++|+|+++++++++.++.++.+..
T Consensus 247 ~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~ 283 (297)
T 2pm7_B 247 LLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 283 (297)
T ss_dssp ESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEE
T ss_pred eeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEE
Confidence 24689999999999999998877653
No 87
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=8e-33 Score=241.96 Aligned_cols=237 Identities=14% Similarity=0.250 Sum_probs=199.2
Q ss_pred EEeeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCCC
Q psy9936 5 FDLDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQG 81 (315)
Q Consensus 5 ~~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~ 81 (315)
+.+.. ...|++++|+|+|++||+|+.||.|+|||+.+++.+..+. |...+.++.| ++.+|++++ |+.+++||...
T Consensus 141 ~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~ 218 (420)
T 4gga_A 141 LQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRV 218 (420)
T ss_dssp EECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTS
T ss_pred EEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEee--CCCEEEEEeCCCceeEeeecc
Confidence 34444 5679999999999999999999999999999999988887 7888887766 567888776 89999999843
Q ss_pred --CEEEEe-ecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCe----EEEEeccCCCCeEEEEEcCCCC-EEEE--Ec
Q psy9936 82 --IELHCL-KVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGK----IVSDFSAKKGKLSVMTQNPYNA-CICL--GH 151 (315)
Q Consensus 82 --~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~----~~~~~~~~~~~v~~~~~~p~~~-~l~~--~~ 151 (315)
..+..+ .|...+..+.|+|++.++++++.|+.+++|+..+++ .+.....|...|.+++|+|++. ++++ |+
T Consensus 219 ~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs 298 (420)
T 4gga_A 219 AEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGT 298 (420)
T ss_dssp SSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECT
T ss_pred cceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeec
Confidence 333333 466889999999999999999999999999998764 3456677899999999999765 5554 45
Q ss_pred CCCeEEEEcCCCCcceeEeecccccEEEEEECCCCCEEEEee--CCCcEEEEEccCCCCCeeEeccCC-CceeEEEccCC
Q psy9936 152 RNGTVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSA--GDSQLRIWDVRNLEGPLNTFRTRT-PINNLAFSQRG 228 (315)
Q Consensus 152 ~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~g 228 (315)
.|+.|++||+++++++..+.. ...+.++.|+|++..+++++ .|+.|+|||+.++ +++..+.+|. .|++++|+|||
T Consensus 299 ~D~~I~iwd~~t~~~~~~~~~-~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~-~~v~~l~gH~~~V~~l~~spdg 376 (420)
T 4gga_A 299 SDRHIRIWNVCSGACLSAVDA-HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM-AKVAELKGHTSRVLSLTMSPDG 376 (420)
T ss_dssp TTCEEEEEETTTTEEEEEEEC-SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC-CEEEEECCCSSCEEEEEECTTS
T ss_pred CCCEEEEEeCCccccceeecc-ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCC-cEEEEEcCCCCCEEEEEEcCCC
Confidence 799999999999998888874 56788999999999888765 7899999999999 9999999887 69999999999
Q ss_pred e--EEEEcCCEEEecCCCc
Q psy9936 229 L--LATSRGNIVEFLKPPE 245 (315)
Q Consensus 229 ~--~~~~~~~~i~~~~~~~ 245 (315)
. +.++.|++|++|++..
T Consensus 377 ~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 377 ATVASAAADETLRLWRCFE 395 (420)
T ss_dssp SCEEEEETTTEEEEECCSC
T ss_pred CEEEEEecCCeEEEEECCC
Confidence 5 3445699999999643
No 88
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.1e-33 Score=232.93 Aligned_cols=227 Identities=14% Similarity=0.162 Sum_probs=196.1
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCc---eEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCCCCEE
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRK---TLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGIEL 84 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~---~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~~~ 84 (315)
...|.+++|+|++++|++++.||.|++|++... +....+. |...|.++.| ++.++++++ |+.|++|| .+...
T Consensus 59 ~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d-~~~~~ 135 (313)
T 3odt_A 59 QGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK-EGSLV 135 (313)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE-TTEEE
T ss_pred CccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc-CCcEE
Confidence 788999999999999999999999999998654 3444444 8889999999 455666665 89999999 44444
Q ss_pred EEe-ecCCceEEEEEcC-CCceEEEEcCCCeEEEEEccCCeEEEEecc-CCCCeEEEEEcCCCCEEEEEcCCCeEEEEcC
Q psy9936 85 HCL-KVLNKVTRMEFLP-YHFLLATASEEGYLSWLDTSIGKIVSDFSA-KKGKLSVMTQNPYNACICLGHRNGTVTMWSP 161 (315)
Q Consensus 85 ~~~-~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~-~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~ 161 (315)
..+ .+...+.++.|+| ++.++++++.|+.|++|| .++....+.. |...+.+++|+|++. +++++.|+.|++||+
T Consensus 136 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~ 212 (313)
T 3odt_A 136 YNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDM 212 (313)
T ss_dssp EEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEET
T ss_pred EecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEEC
Confidence 443 4668999999998 899999999999999999 4566777776 889999999999998 899999999999999
Q ss_pred CCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-CceeEEEccCCe-EEEEcCCEEE
Q psy9936 162 TVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-PINNLAFSQRGL-LATSRGNIVE 239 (315)
Q Consensus 162 ~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~g~-~~~~~~~~i~ 239 (315)
++++++..+.+|...|++++|+|++ .|++++.||.|++||+.++ +++..+..+. ++.+++|+|++. ++++.|+.|+
T Consensus 213 ~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~ 290 (313)
T 3odt_A 213 HTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENG-SLKQVITLPAISIWSVDCMSNGDIIVGSSDNLVR 290 (313)
T ss_dssp TTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTC-CEEEEEECSSSCEEEEEECTTSCEEEEETTSCEE
T ss_pred CchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCC-ceeEEEeccCceEEEEEEccCCCEEEEeCCCcEE
Confidence 9999999999999999999999999 5889999999999999998 8888888776 799999999995 5556799999
Q ss_pred ecCCC
Q psy9936 240 FLKPP 244 (315)
Q Consensus 240 ~~~~~ 244 (315)
+|+..
T Consensus 291 iw~~~ 295 (313)
T 3odt_A 291 IFSQE 295 (313)
T ss_dssp EEESC
T ss_pred EEeCC
Confidence 99963
No 89
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-34 Score=267.54 Aligned_cols=235 Identities=18% Similarity=0.197 Sum_probs=197.6
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEcc--CceEEEEec-CCCceeEEEEeec--CcEEEEEe-CCeEEEEeCCCCE
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWV--RKTLACEMN-VMEEVYDIKWLHL--ETMFAVAQ-KDWVYIYDNQGIE 83 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~--~~~~~~~~~-~~~~v~~~~~~~~--~~~l~~~~-~~~i~i~~~~~~~ 83 (315)
.++|++++|+|++++|++|+.||.|+|||+. +++....+. |..+|.+++|+|+ +.+|++++ ||.|++||+.+..
T Consensus 9 ~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~ 88 (753)
T 3jro_A 9 NELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGR 88 (753)
T ss_dssp CCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTE
T ss_pred cceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 7899999999999999999999999999998 455666666 8899999999987 88888876 8999999996553
Q ss_pred ---EEEe-ecCCceEEEEEcCC--CceEEEEcCCCeEEEEEccCC--eEEEEeccCCCCeEEEEEcC-------------
Q psy9936 84 ---LHCL-KVLNKVTRMEFLPY--HFLLATASEEGYLSWLDTSIG--KIVSDFSAKKGKLSVMTQNP------------- 142 (315)
Q Consensus 84 ---~~~~-~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~--~~~~~~~~~~~~v~~~~~~p------------- 142 (315)
+..+ .|...|.+++|+|+ +..+++++.||.|++||+.++ .....+..|...|.+++|+|
T Consensus 89 ~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~ 168 (753)
T 3jro_A 89 WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTK 168 (753)
T ss_dssp EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CG
T ss_pred ccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCC
Confidence 2333 36689999999999 999999999999999999876 34455678999999999999
Q ss_pred CCCEEEEEcCCCeEEEEcCCCC----cceeEeecccccEEEEEECCC---CCEEEEeeCCCcEEEEEccCCCC----Cee
Q psy9936 143 YNACICLGHRNGTVTMWSPTVQ----KPLASLLCHKAGIQSVAVNHT---GTYMATSAGDSQLRIWDVRNLEG----PLN 211 (315)
Q Consensus 143 ~~~~l~~~~~d~~i~i~d~~~~----~~~~~~~~~~~~i~~~~~sp~---g~~l~~~~~d~~i~iwd~~~~~~----~~~ 211 (315)
++.+|++|+.||.|++||++++ ..+..+.+|..+|++++|+|+ +.+|++|+.||.|++||+.++.. .+.
T Consensus 169 d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~ 248 (753)
T 3jro_A 169 ESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLL 248 (753)
T ss_dssp GGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBS
T ss_pred CCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEe
Confidence 5899999999999999999877 455677789999999999999 89999999999999999998621 222
Q ss_pred EeccC-CCceeEEEccCCe--EEEEcCCEEEecCCC
Q psy9936 212 TFRTR-TPINNLAFSQRGL--LATSRGNIVEFLKPP 244 (315)
Q Consensus 212 ~~~~~-~~v~~~~~s~~g~--~~~~~~~~i~~~~~~ 244 (315)
....+ ..|++++|+|+|. ++++.||.|++|+..
T Consensus 249 ~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 249 KEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp SSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred ccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence 22223 3689999999995 334568999999973
No 90
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=7.5e-34 Score=249.89 Aligned_cols=198 Identities=11% Similarity=0.140 Sum_probs=168.7
Q ss_pred CcEEEEEEcCCC--CEEEEEcCCCeEEEEEccCceEE---------------------------------------EE--
Q psy9936 11 FGIYRMNYTKNG--RHLLLGGKRGHVAAFDWVRKTLA---------------------------------------CE-- 47 (315)
Q Consensus 11 ~~v~~~~~s~~~--~~l~~~~~dg~i~v~~~~~~~~~---------------------------------------~~-- 47 (315)
..|.+++|+|++ .+|++++.||.|++|++.++... ..
T Consensus 94 ~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
T 3dw8_B 94 EKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFA 173 (447)
T ss_dssp CCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEEC
T ss_pred CceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEec
Confidence 789999999998 79999999999999998765432 12
Q ss_pred ecCCCceeEEEEeecCcEEEEEeCCeEEEEeCC-CC-EEEEe--------ecCCceEEEEEcCCC-ceEEEEcCCCeEEE
Q psy9936 48 MNVMEEVYDIKWLHLETMFAVAQKDWVYIYDNQ-GI-ELHCL--------KVLNKVTRMEFLPYH-FLLATASEEGYLSW 116 (315)
Q Consensus 48 ~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~~-~~-~~~~~--------~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~ 116 (315)
..|...|.+++|+|++++|+++.|+.|++||+. +. .+..+ .|...|.+++|+|++ .+|++++.||.|++
T Consensus 174 ~~h~~~v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~i 253 (447)
T 3dw8_B 174 NAHTYHINSISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRL 253 (447)
T ss_dssp SCCSSCCCEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred cCCCcceEEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEE
Confidence 238889999999999999999989999999997 33 23322 355789999999998 99999999999999
Q ss_pred EEccCCeE----EEEeccCCC------------CeEEEEEcCCCCEEEEEcCCCeEEEEcCCC-CcceeEeeccccc---
Q psy9936 117 LDTSIGKI----VSDFSAKKG------------KLSVMTQNPYNACICLGHRNGTVTMWSPTV-QKPLASLLCHKAG--- 176 (315)
Q Consensus 117 ~d~~~~~~----~~~~~~~~~------------~v~~~~~~p~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~--- 176 (315)
||+++++. +..+..|.. .|.+++|+|+|++|++++. +.|++||+++ ++++..+.+|...
T Consensus 254 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~ 332 (447)
T 3dw8_B 254 CDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSK 332 (447)
T ss_dssp EETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTT
T ss_pred EECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccc
Confidence 99998876 677887775 8999999999999999998 9999999997 8888888888642
Q ss_pred ------------EEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCe
Q psy9936 177 ------------IQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPL 210 (315)
Q Consensus 177 ------------i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~ 210 (315)
+..++|+|++.+|++|+.||.|++||+.++ +.+
T Consensus 333 l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~-~~~ 377 (447)
T 3dw8_B 333 LCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTK-RDI 377 (447)
T ss_dssp HHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTC-CEE
T ss_pred ccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCC-cce
Confidence 334899999999999999999999999987 544
No 91
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=9.6e-34 Score=241.69 Aligned_cols=235 Identities=14% Similarity=0.134 Sum_probs=195.2
Q ss_pred CCCcEEEEEEcCC---CCEEEEEcCCCeEEEEEccCce-EEEEec-CCCceeEEEE------eecCcEEEEEe-CCeEEE
Q psy9936 9 LQFGIYRMNYTKN---GRHLLLGGKRGHVAAFDWVRKT-LACEMN-VMEEVYDIKW------LHLETMFAVAQ-KDWVYI 76 (315)
Q Consensus 9 ~~~~v~~~~~s~~---~~~l~~~~~dg~i~v~~~~~~~-~~~~~~-~~~~v~~~~~------~~~~~~l~~~~-~~~i~i 76 (315)
...+|.+++|+|+ +.+|++++.||.|++||+.+++ ....+. |...|.++.| +|++.+|++++ |+.|++
T Consensus 64 ~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~v 143 (357)
T 3i2n_A 64 KAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKV 143 (357)
T ss_dssp ESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEE
T ss_pred ccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEE
Confidence 3789999999998 6999999999999999999887 666666 8889999965 67888888876 899999
Q ss_pred EeCCCC--EEEEeec-C----CceEEEE----EcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcC---
Q psy9936 77 YDNQGI--ELHCLKV-L----NKVTRME----FLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNP--- 142 (315)
Q Consensus 77 ~~~~~~--~~~~~~~-~----~~v~~~~----~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p--- 142 (315)
||+... .+..+.. . ..+.+++ |+|++.++++++.|+.|++||+++++.... ..|...+.+++|+|
T Consensus 144 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~ 222 (357)
T 3i2n_A 144 WDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDI 222 (357)
T ss_dssp ECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSS
T ss_pred EeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCC
Confidence 999543 3444432 2 3788888 788999999999999999999998887544 56888999999999
Q ss_pred CCCEEEEEcCCCeEEEEcCCCCcceeEee-----cccccEEEEEECCCCC-EEEEeeCCCcEEEEEccCCCC--------
Q psy9936 143 YNACICLGHRNGTVTMWSPTVQKPLASLL-----CHKAGIQSVAVNHTGT-YMATSAGDSQLRIWDVRNLEG-------- 208 (315)
Q Consensus 143 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-----~~~~~i~~~~~sp~g~-~l~~~~~d~~i~iwd~~~~~~-------- 208 (315)
++.+|++++.|+.|++||+++++++..+. +|...|++++|+|++. +|++++.||.|++||++....
T Consensus 223 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g 302 (357)
T 3i2n_A 223 SMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEG 302 (357)
T ss_dssp SCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTS
T ss_pred CCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCC
Confidence 99999999999999999999887766655 8999999999999998 899999999999999986521
Q ss_pred ----------CeeEeccCC-CceeEEEccCCe-EE--EEcCCEEEecCCC
Q psy9936 209 ----------PLNTFRTRT-PINNLAFSQRGL-LA--TSRGNIVEFLKPP 244 (315)
Q Consensus 209 ----------~~~~~~~~~-~v~~~~~s~~g~-~~--~~~~~~i~~~~~~ 244 (315)
++..+..|. +|++++|+|+|. ++ ++.|+.|++|+..
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~ 352 (357)
T 3i2n_A 303 IEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVT 352 (357)
T ss_dssp CCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred CccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECC
Confidence 344555555 699999999994 33 4569999999864
No 92
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8e-34 Score=250.47 Aligned_cols=247 Identities=11% Similarity=0.087 Sum_probs=203.1
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCce---EEEEecC------------------------------------
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKT---LACEMNV------------------------------------ 50 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~---~~~~~~~------------------------------------ 50 (315)
..++.+++|+|+|++|+++ .++.|++||+.+++ .+..+..
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 3578899999999977665 57789999999888 5444431
Q ss_pred -------------------CCceeEEEEeecCcEE-EEEe-CCeEEEEeCC--C-CEEEEe---ecCCceEEEEEcCCCc
Q psy9936 51 -------------------MEEVYDIKWLHLETMF-AVAQ-KDWVYIYDNQ--G-IELHCL---KVLNKVTRMEFLPYHF 103 (315)
Q Consensus 51 -------------------~~~v~~~~~~~~~~~l-~~~~-~~~i~i~~~~--~-~~~~~~---~~~~~v~~~~~~~~~~ 103 (315)
...|.+++|+|++++| ++++ |+.|++|++. + ..+..+ .+...|.+++|+|++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 1259999999999986 6664 8999999986 3 444444 4558899999999999
Q ss_pred eEEEEcCCCeEEEEEccCCeEEE----EeccCCCCeEEEEEcCC---CCEEEEEcCCCeEEEEcCCCCcceeE-eecccc
Q psy9936 104 LLATASEEGYLSWLDTSIGKIVS----DFSAKKGKLSVMTQNPY---NACICLGHRNGTVTMWSPTVQKPLAS-LLCHKA 175 (315)
Q Consensus 104 ~l~~~~~d~~i~~~d~~~~~~~~----~~~~~~~~v~~~~~~p~---~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~ 175 (315)
+|++++.+|.+++|++.++.... .+.+|...|++++|+|+ +++|++|+.|+.|++||+++++.+.. +.+|..
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~ 242 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKH 242 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSS
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCC
Confidence 99999999999999998876543 67789999999999999 99999999999999999999988877 558999
Q ss_pred cEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccC--------------------------CCceeEEEccCCe
Q psy9936 176 GIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTR--------------------------TPINNLAFSQRGL 229 (315)
Q Consensus 176 ~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--------------------------~~v~~~~~s~~g~ 229 (315)
.|.+++|+ ++.+|++++.|+.|++||+.++ +++..+..+ ..+.+++|+|++.
T Consensus 243 ~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~ 320 (450)
T 2vdu_B 243 FVSSICCG-KDYLLLSAGGDDKIFAWDWKTG-KNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLP 320 (450)
T ss_dssp CEEEEEEC-STTEEEEEESSSEEEEEETTTC-CEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSS
T ss_pred ceEEEEEC-CCCEEEEEeCCCeEEEEECCCC-cEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCC
Confidence 99999999 9999999999999999999998 777776532 2578999999994
Q ss_pred --EEEE-cCCEEEecCC--------------------CceeecccccccccCC
Q psy9936 230 --LATS-RGNIVEFLKP--------------------PEINFEPRRKANKAGG 259 (315)
Q Consensus 230 --~~~~-~~~~i~~~~~--------------------~~~~~~~~~~~~~~~~ 259 (315)
++++ .++.|++|+. .+++|+|++.+++.++
T Consensus 321 ~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~~~~ 373 (450)
T 2vdu_B 321 FVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDEFQVTLDN 373 (450)
T ss_dssp EEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTEEEEEECC
T ss_pred EEEEEECCCCeEEEEEeccCCCCceeeccEeccCCceEEEEecCCcEEEEEec
Confidence 3334 5888998865 4577888665555444
No 93
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=3.4e-33 Score=255.12 Aligned_cols=238 Identities=13% Similarity=0.187 Sum_probs=203.4
Q ss_pred cEEEeeC-CCc-EEEEEEcC--CCCEEEEEcCCCeEEEEEccCc--------eEEEEec-CCCceeEEEEeecCcEEEEE
Q psy9936 3 KQFDLDL-QFG-IYRMNYTK--NGRHLLLGGKRGHVAAFDWVRK--------TLACEMN-VMEEVYDIKWLHLETMFAVA 69 (315)
Q Consensus 3 ~~~~~~~-~~~-v~~~~~s~--~~~~l~~~~~dg~i~v~~~~~~--------~~~~~~~-~~~~v~~~~~~~~~~~l~~~ 69 (315)
....+.. ... |.+++|+| ++++|++++.||.|++||+.++ +....+. |...|.+++|+|++++|+++
T Consensus 55 ~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 134 (615)
T 1pgu_A 55 PVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVV 134 (615)
T ss_dssp SEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred cceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEe
Confidence 3445555 677 99999999 9999999999999999999755 5555565 88899999999999999988
Q ss_pred eC-----CeEEEEeCCCCEEEEe-ecCCceEEEEEcCCCc-eEEEEcCCCeEEEEEccCCeEEEEeccCCC---CeEEEE
Q psy9936 70 QK-----DWVYIYDNQGIELHCL-KVLNKVTRMEFLPYHF-LLATASEEGYLSWLDTSIGKIVSDFSAKKG---KLSVMT 139 (315)
Q Consensus 70 ~~-----~~i~i~~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~---~v~~~~ 139 (315)
++ +.|++||. +..+..+ .|...|.+++|+|++. .+++++.|+.|++||+.+++.+..+..|.. .|.+++
T Consensus 135 ~~~~~~~~~v~~~d~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~ 213 (615)
T 1pgu_A 135 GEGRDNFGVFISWDS-GNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVE 213 (615)
T ss_dssp ECCSSCSEEEEETTT-CCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEE
T ss_pred ccCCCCccEEEEEEC-CCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEE
Confidence 73 58999994 4444444 4668999999999997 899999999999999999999999999998 999999
Q ss_pred EcCC-CCEEEEEcCCCeEEEEcCCCCcceeEe-e---cccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEec
Q psy9936 140 QNPY-NACICLGHRNGTVTMWSPTVQKPLASL-L---CHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFR 214 (315)
Q Consensus 140 ~~p~-~~~l~~~~~d~~i~i~d~~~~~~~~~~-~---~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 214 (315)
|+|+ +++|++++.|+.|++||+++++.+..+ . .|...|.+++|+ ++.+|++++.|+.|++||++++ +++..+.
T Consensus 214 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~-~~~~~~~ 291 (615)
T 1pgu_A 214 FSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTS-KCVQKWT 291 (615)
T ss_dssp ECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTT-EEEEEEE
T ss_pred ECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCC-cEEEEEc
Confidence 9999 999999999999999999999999988 5 799999999999 9999999999999999999988 7777777
Q ss_pred cC-----CCceeEEEccCCe-EEEEcCCEEEecCC
Q psy9936 215 TR-----TPINNLAFSQRGL-LATSRGNIVEFLKP 243 (315)
Q Consensus 215 ~~-----~~v~~~~~s~~g~-~~~~~~~~i~~~~~ 243 (315)
.+ ..+.++.|+.... ++++.++.|++|++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~ 326 (615)
T 1pgu_A 292 LDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 326 (615)
T ss_dssp CCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred CCCCcccCceeEEEeCCCCeEEEEECCCCEEEEEC
Confidence 65 3467777763333 44456888888876
No 94
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-33 Score=266.33 Aligned_cols=201 Identities=12% Similarity=0.125 Sum_probs=178.1
Q ss_pred eCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEe-CCeEEEEeCC-CCEEE
Q psy9936 8 DLQFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQ-GIELH 85 (315)
Q Consensus 8 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~-~~~~~ 85 (315)
.....|++++|+|++++||+|+.||.|+||+..+.+....+.|...|.+++|+| +++|++++ |+.|++||+. +..+.
T Consensus 15 gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~ 93 (902)
T 2oaj_A 15 GMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLT 93 (902)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEE
T ss_pred CCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEE
Confidence 347899999999999999999999999999999888877777888999999999 77777765 8999999994 56666
Q ss_pred EeecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEE-----------EEeccCCCCeEEEEEcCC-CCEEEEEcCC
Q psy9936 86 CLKVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIV-----------SDFSAKKGKLSVMTQNPY-NACICLGHRN 153 (315)
Q Consensus 86 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~-----------~~~~~~~~~v~~~~~~p~-~~~l~~~~~d 153 (315)
.+.+...|.+++|+|++++|++|+.||.|++||+.+++.. ..+.+|.+.|.+++|+|+ +..|++|+.|
T Consensus 94 ~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~d 173 (902)
T 2oaj_A 94 TVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEY 173 (902)
T ss_dssp EEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSS
T ss_pred EEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCC
Confidence 7777889999999999999999999999999999988753 234568899999999996 4789999999
Q ss_pred CeEEEEcCCCCcceeEeecc------------------cccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCee
Q psy9936 154 GTVTMWSPTVQKPLASLLCH------------------KAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLN 211 (315)
Q Consensus 154 ~~i~i~d~~~~~~~~~~~~~------------------~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~ 211 (315)
+.| +||+++++++..+..| ...|++++|+|+|.+|++++.|+.|++||++++ +++.
T Consensus 174 g~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g-~~~~ 247 (902)
T 2oaj_A 174 VTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSG-HMIM 247 (902)
T ss_dssp CEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTC-CEEE
T ss_pred CcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC-cEEE
Confidence 999 9999999888887755 477999999999999999999999999999987 6654
No 95
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.8e-33 Score=256.88 Aligned_cols=253 Identities=9% Similarity=0.028 Sum_probs=215.6
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCc----eEEEEec-CCCc-eeEEEEee--cCcEEEEEe-CCeEEEEeCC
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRK----TLACEMN-VMEE-VYDIKWLH--LETMFAVAQ-KDWVYIYDNQ 80 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~----~~~~~~~-~~~~-v~~~~~~~--~~~~l~~~~-~~~i~i~~~~ 80 (315)
.+.|.+++|+|+|++|++++ ++.|++|++.++ +....+. |... |.+++|+| ++++|++++ |+.|++||+.
T Consensus 18 ~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~ 96 (615)
T 1pgu_A 18 RNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWT 96 (615)
T ss_dssp TTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEE
T ss_pred cCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCC
Confidence 67899999999999999988 789999999988 7777776 8889 99999999 999999887 8999999994
Q ss_pred -C--------CEEEEee-cCCceEEEEEcCCCceEEEEcCC----CeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCC-
Q psy9936 81 -G--------IELHCLK-VLNKVTRMEFLPYHFLLATASEE----GYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNA- 145 (315)
Q Consensus 81 -~--------~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d----~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~- 145 (315)
+ .....+. +...|.+++|+|++++|++++.+ +.|.+|| .++.+..+..|...|.+++|+|+++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~ 174 (615)
T 1pgu_A 97 FDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPM 174 (615)
T ss_dssp EEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSC
T ss_pred CCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCc
Confidence 2 2333333 56899999999999999999987 6888888 5778888999999999999999998
Q ss_pred EEEEEcCCCeEEEEcCCCCcceeEeecccc---cEEEEEECCC-CCEEEEeeCCCcEEEEEccCCCCCeeEe-c---cC-
Q psy9936 146 CICLGHRNGTVTMWSPTVQKPLASLLCHKA---GIQSVAVNHT-GTYMATSAGDSQLRIWDVRNLEGPLNTF-R---TR- 216 (315)
Q Consensus 146 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~---~i~~~~~sp~-g~~l~~~~~d~~i~iwd~~~~~~~~~~~-~---~~- 216 (315)
++++++.|+.|++||+.+++.+..+.+|.. .|.+++|+|+ +++|++++.|+.|++||+.++ +++..+ . .|
T Consensus 175 ~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~~~~~~ 253 (615)
T 1pgu_A 175 RSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSG-EFLKYIEDDQEPVQ 253 (615)
T ss_dssp EEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTC-CEEEECCBTTBCCC
T ss_pred EEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCC-CEeEEecccccccC
Confidence 899999999999999999999999999999 9999999999 999999999999999999998 888888 3 44
Q ss_pred CCceeEEEccCCe--EEEEcCCEEEecCCC--------------------ceeecccccccccCCcchhhhhhh
Q psy9936 217 TPINNLAFSQRGL--LATSRGNIVEFLKPP--------------------EINFEPRRKANKAGGSVQRAKVKK 268 (315)
Q Consensus 217 ~~v~~~~~s~~g~--~~~~~~~~i~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~ 268 (315)
.+|.+++|+ ++. +.++.|+.|++|+.. .+.| +++..+++++.++.++...
T Consensus 254 ~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~g~i~~~d 325 (615)
T 1pgu_A 254 GGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVA-TGNGRIISLSLDGTLNFYE 325 (615)
T ss_dssp SCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEE-EETTEEEEEETTSCEEEEE
T ss_pred CceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEe-CCCCeEEEEECCCCEEEEE
Confidence 479999999 874 344458999999871 2233 3677788887777655543
No 96
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=8.2e-34 Score=249.32 Aligned_cols=233 Identities=15% Similarity=0.122 Sum_probs=189.0
Q ss_pred CCcEEEEEEcC-CCCEEEEEcCCCeEEEEEccCceEEEEec---CCCceeEEEEeecCcEEEEEe-CCeEEEEeCCCCEE
Q psy9936 10 QFGIYRMNYTK-NGRHLLLGGKRGHVAAFDWVRKTLACEMN---VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGIEL 84 (315)
Q Consensus 10 ~~~v~~~~~s~-~~~~l~~~~~dg~i~v~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~~~ 84 (315)
.+.|++++|+| ++.+|++++.||+|++||+.++....... +...+.+++|+|++.+|++++ ||.|++||+++..+
T Consensus 164 ~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~ 243 (435)
T 4e54_B 164 GGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKEL 243 (435)
T ss_dssp SCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBC
T ss_pred CCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCccee
Confidence 68899999998 68899999999999999998776544443 234578899999999999887 89999999987766
Q ss_pred EEee-cCCceEEEEEcCCCc-eEEEEcCCCeEEEEEccCCeEEEE---eccCCCCeEEEEEcCCCCEEEEEcCCCeEEEE
Q psy9936 85 HCLK-VLNKVTRMEFLPYHF-LLATASEEGYLSWLDTSIGKIVSD---FSAKKGKLSVMTQNPYNACICLGHRNGTVTMW 159 (315)
Q Consensus 85 ~~~~-~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~---~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~ 159 (315)
..+. |...|.+++|+|++. +|++++.|+.|++||+++++.... ..+|...|++++|+|+|++|++++.|+.|++|
T Consensus 244 ~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iw 323 (435)
T 4e54_B 244 WNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVY 323 (435)
T ss_dssp CCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEE
T ss_pred EEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEE
Confidence 5544 568999999999875 788999999999999987654333 35688999999999999999999999999999
Q ss_pred cCCCCcceeEeecccc------cEEEEEECCCCCEEEEee------------CCCcEEEEEccCCCCCeeEec-cCC-Cc
Q psy9936 160 SPTVQKPLASLLCHKA------GIQSVAVNHTGTYMATSA------------GDSQLRIWDVRNLEGPLNTFR-TRT-PI 219 (315)
Q Consensus 160 d~~~~~~~~~~~~~~~------~i~~~~~sp~g~~l~~~~------------~d~~i~iwd~~~~~~~~~~~~-~~~-~v 219 (315)
|++++.....+..|.. .+....|+|++.++++++ .++.|++||..++ .++..+. .|. .|
T Consensus 324 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g-~~~~~l~~~~~~~v 402 (435)
T 4e54_B 324 SASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSG-KMMCQLYDPESSGI 402 (435)
T ss_dssp ESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSC-CEEEEECCSSCCCC
T ss_pred ECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCC-cEEEEEeCCCCCcE
Confidence 9999888777765542 234567888877777664 2357999999998 7777764 343 57
Q ss_pred eeE-EEccCCe-EEEEcCCEEEecCC
Q psy9936 220 NNL-AFSQRGL-LATSRGNIVEFLKP 243 (315)
Q Consensus 220 ~~~-~~s~~g~-~~~~~~~~i~~~~~ 243 (315)
.++ +|+|+|. ++++.|+.|++|++
T Consensus 403 ~s~~~fspdg~~lasg~d~~i~iW~~ 428 (435)
T 4e54_B 403 SSLNEFNPMGDTLASAMGYHILIWSQ 428 (435)
T ss_dssp CCEEEECTTSSCEEEECSSEEEECCC
T ss_pred EEEEEECCCCCEEEEEcCCcEEEEEC
Confidence 777 6999995 55566899999986
No 97
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=5.1e-32 Score=229.57 Aligned_cols=234 Identities=15% Similarity=0.230 Sum_probs=198.2
Q ss_pred eeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCCCCE
Q psy9936 7 LDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGIE 83 (315)
Q Consensus 7 ~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~~ 83 (315)
+.. ...|.+++|+|++++|++++.|+.|++|+........... +...+..+.+++++.+|++++ |+.+++||.....
T Consensus 82 l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~ 161 (340)
T 4aow_A 82 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 161 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCE
T ss_pred EeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCc
Confidence 344 6789999999999999999999999999999888776665 667888899999998888876 8999999996654
Q ss_pred EEEe---ecCCceEEEEEcCCC--ceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCeEEE
Q psy9936 84 LHCL---KVLNKVTRMEFLPYH--FLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNGTVTM 158 (315)
Q Consensus 84 ~~~~---~~~~~v~~~~~~~~~--~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i 158 (315)
.... .+...+..++|++++ .++++++.|+.|++||+.+++.+..+.+|.+.|++++|+|++++|++|+.|+.|++
T Consensus 162 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~i 241 (340)
T 4aow_A 162 KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAML 241 (340)
T ss_dssp EEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEE
T ss_pred eEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEE
Confidence 4332 345789999999874 57889999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEec---------cCC-CceeEEEccCC
Q psy9936 159 WSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFR---------TRT-PINNLAFSQRG 228 (315)
Q Consensus 159 ~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~---------~~~-~v~~~~~s~~g 228 (315)
||+++.+++..+. +...+.++.|+|++.++ +++.|+.|++||+++. ..+..+. .|. .|++++|+|||
T Consensus 242 wd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg 318 (340)
T 4aow_A 242 WDLNEGKHLYTLD-GGDIINALCFSPNRYWL-CAATGPSIKIWDLEGK-IIVDELKQEVISTSSKAEPPQCTSLAWSADG 318 (340)
T ss_dssp EETTTTEEEEEEE-CSSCEEEEEECSSSSEE-EEEETTEEEEEETTTT-EEEEEECCC-------CCCCCEEEEEECTTS
T ss_pred EEeccCceeeeec-CCceEEeeecCCCCcee-eccCCCEEEEEECCCC-eEEEeccccceeeeccCCCCCEEEEEECCCC
Confidence 9999999888887 45789999999988655 5667999999999886 5555443 233 58999999999
Q ss_pred eEE--EEcCCEEEecCC
Q psy9936 229 LLA--TSRGNIVEFLKP 243 (315)
Q Consensus 229 ~~~--~~~~~~i~~~~~ 243 (315)
.++ ++.|+.|++|++
T Consensus 319 ~~l~sgs~Dg~v~iW~~ 335 (340)
T 4aow_A 319 QTLFAGYTDNLVRVWQV 335 (340)
T ss_dssp SEEEEEETTSCEEEEEE
T ss_pred CEEEEEeCCCEEEEEeC
Confidence 543 346899999984
No 98
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.6e-32 Score=230.53 Aligned_cols=252 Identities=14% Similarity=0.229 Sum_probs=207.1
Q ss_pred EEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec---CCCceeEEEEeecCcEEEEEe-CCeEEEEeCCCC-EEEEe
Q psy9936 13 IYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN---VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGI-ELHCL 87 (315)
Q Consensus 13 v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~-~~~~~ 87 (315)
..+|+||+++ +||+| .|++|+|||+.+++.+..+. |...|.+++|+|++++|++++ |+.|++|++... .+..+
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM 105 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe
Confidence 4679999986 77776 48999999999999887764 667899999999999999887 899999999654 44444
Q ss_pred e-cCCceEEEEEcCCCceEEEEcCCCeEEEEEccCC-eEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCeEEEEcCCCCc
Q psy9936 88 K-VLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIG-KIVSDFSAKKGKLSVMTQNPYNACICLGHRNGTVTMWSPTVQK 165 (315)
Q Consensus 88 ~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~-~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~ 165 (315)
. |...+.++ ++++..+++++.++.+.+|+.... ..+..+.+|...+..+.+++++++|++++.|+.|++||+++++
T Consensus 106 ~~h~~~~~~~--~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 183 (318)
T 4ggc_A 106 TSHSARVGSL--SWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGE 183 (318)
T ss_dssp ECCSSCEEEE--EEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBT
T ss_pred cCccceEEEe--ecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCc
Confidence 3 34555554 555779999999999999998765 4666788899999999999999999999999999999999875
Q ss_pred c----eeEeecccccEEEEEECCCCCE---EEEeeCCCcEEEEEccCCCCCeeEeccCCCceeEEEccCCe--EEEE--c
Q psy9936 166 P----LASLLCHKAGIQSVAVNHTGTY---MATSAGDSQLRIWDVRNLEGPLNTFRTRTPINNLAFSQRGL--LATS--R 234 (315)
Q Consensus 166 ~----~~~~~~~~~~i~~~~~sp~g~~---l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~--~~~~--~ 234 (315)
. ......|.+.|.+++++|++.. +++++.++.|++||.... ...........+..+.|+|++. ++++ .
T Consensus 184 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~ 262 (318)
T 4ggc_A 184 GGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG-ACLSAVDAHSQVCSILWSPHYKELISGHGFA 262 (318)
T ss_dssp TBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTC-CEEEEEECSSCEEEEEEETTTTEEEEEECTT
T ss_pred ccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccc-cccccccceeeeeeeeecccccceEEEEEcC
Confidence 3 3444567889999999998663 346678899999999987 7777776777899999999983 3444 4
Q ss_pred CCEEEecCC----------------CceeecccccccccCCcchhhhhhhh
Q psy9936 235 GNIVEFLKP----------------PEINFEPRRKANKAGGSVQRAKVKKI 269 (315)
Q Consensus 235 ~~~i~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (315)
|+.|++|+. ++++|+|+++++++++.|+.++.+..
T Consensus 263 d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~ 313 (318)
T 4ggc_A 263 QNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRC 313 (318)
T ss_dssp TCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred CCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 789999976 67899999999999999998887753
No 99
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.1e-32 Score=235.80 Aligned_cols=247 Identities=13% Similarity=0.123 Sum_probs=197.5
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEE--eCCeEEEEeC-CCCEEEE
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVA--QKDWVYIYDN-QGIELHC 86 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~~~i~i~~~-~~~~~~~ 86 (315)
..+|++++|+|||++|++|+.++ ++||++.+++......+. .+..+.+.+++..++.. .++.|++||. ++..+..
T Consensus 19 ~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~ 96 (355)
T 3vu4_A 19 SNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMR-HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSR 96 (355)
T ss_dssp CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECS-CCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEE
T ss_pred CCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecC-CeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEE
Confidence 78999999999999999998775 789999988776555433 57888899888777544 3679999998 4566666
Q ss_pred eecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCC-eEEEEeccCCCCeEEEEEcCCCCEEEE--EcCCCeEEEEcCCC
Q psy9936 87 LKVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIG-KIVSDFSAKKGKLSVMTQNPYNACICL--GHRNGTVTMWSPTV 163 (315)
Q Consensus 87 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~-~~~~~~~~~~~~v~~~~~~p~~~~l~~--~~~d~~i~i~d~~~ 163 (315)
+.+...|.++.|+++. ++++ .++.|++||+.++ +.+..+.. +...++++| .++++ |+.||.|++||+++
T Consensus 97 ~~~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~ 168 (355)
T 3vu4_A 97 IKVDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQS 168 (355)
T ss_dssp EECSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC
T ss_pred EECCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCC
Confidence 7788899999999875 3333 3789999999987 66665554 445567777 56665 68899999999998
Q ss_pred Cc---------------c-eeEeecccccEEEEEECCCCCEEEEeeCCCc-EEEEEccCCCCCeeEec-c-CC-CceeEE
Q psy9936 164 QK---------------P-LASLLCHKAGIQSVAVNHTGTYMATSAGDSQ-LRIWDVRNLEGPLNTFR-T-RT-PINNLA 223 (315)
Q Consensus 164 ~~---------------~-~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~-i~iwd~~~~~~~~~~~~-~-~~-~v~~~~ 223 (315)
+. + +..+.+|..+|++++|+|+|++|++|+.|++ |++||++++ +++..+. + |. +|++++
T Consensus 169 ~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~-~~~~~~~~g~h~~~v~~~~ 247 (355)
T 3vu4_A 169 SGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDG-VLVREFRRGLDRADVVDMK 247 (355)
T ss_dssp ------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTC-CEEEEEECTTCCSCEEEEE
T ss_pred CCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCC-cEEEEEEcCCCCCcEEEEE
Confidence 65 2 7788999999999999999999999999998 999999998 8888887 3 44 799999
Q ss_pred EccCCeE--EEEcCCEEEecCC---------------------------------------CceeecccccccccCCcch
Q psy9936 224 FSQRGLL--ATSRGNIVEFLKP---------------------------------------PEINFEPRRKANKAGGSVQ 262 (315)
Q Consensus 224 ~s~~g~~--~~~~~~~i~~~~~---------------------------------------~~~~~~~~~~~~~~~~~~~ 262 (315)
|+|+|.+ .++.|++|++|+. ..++|+|+++.++.+..++
T Consensus 248 ~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg 327 (355)
T 3vu4_A 248 WSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTR 327 (355)
T ss_dssp ECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTT
T ss_pred ECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCC
Confidence 9999954 3456899999975 3357999999999988877
Q ss_pred hhhhh
Q psy9936 263 RAKVK 267 (315)
Q Consensus 263 ~~~~~ 267 (315)
..+..
T Consensus 328 ~~~~~ 332 (355)
T 3vu4_A 328 MIETF 332 (355)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 65544
No 100
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1e-31 Score=236.60 Aligned_cols=248 Identities=12% Similarity=0.180 Sum_probs=213.1
Q ss_pred EEeeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCC-
Q psy9936 5 FDLDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQ- 80 (315)
Q Consensus 5 ~~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~- 80 (315)
..+.. ..+|.+++|+ +.+|++++.||.|++||+.+++....+. |...|.++.|+ +..+++++ |+.|++||+.
T Consensus 153 ~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~ 228 (445)
T 2ovr_B 153 RTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIET 228 (445)
T ss_dssp EECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSS
T ss_pred EEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCC
Confidence 34444 7889999997 5699999999999999999999888887 88899999995 44566555 8999999995
Q ss_pred CCEEEEe-ecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCeEEEE
Q psy9936 81 GIELHCL-KVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNGTVTMW 159 (315)
Q Consensus 81 ~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~ 159 (315)
+..+..+ .|...+.+++| ++.++++++.||.|++||+.+++.+..+.+|...+.+++| ++.++++++.|+.|++|
T Consensus 229 ~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~ 304 (445)
T 2ovr_B 229 GQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVW 304 (445)
T ss_dssp CCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEE
T ss_pred CcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEE
Confidence 4455454 45688999998 6889999999999999999999999999999999999999 78899999999999999
Q ss_pred cCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEecc---C-CCceeEEEccCCeEEEEcC
Q psy9936 160 SPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRT---R-TPINNLAFSQRGLLATSRG 235 (315)
Q Consensus 160 d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~---~-~~v~~~~~s~~g~~~~~~~ 235 (315)
|+++++.+..+.+|...+.++.+ ++.+|++|+.||.|++||++++ +++..+.. | .+|.+++|+++-.++++.|
T Consensus 305 d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~d 381 (445)
T 2ovr_B 305 DVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTG-QCLQTLQGPNKHQSAVTCLQFNKNFVITSSDD 381 (445)
T ss_dssp ETTTCCEEEEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTC-CEEEEECSTTSCSSCEEEEEECSSEEEEEETT
T ss_pred ECCCCCEEEEEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCC-cEEEEEccCCCCCCCEEEEEECCCEEEEEeCC
Confidence 99999999999999999998887 4679999999999999999998 88888875 3 3699999986545666779
Q ss_pred CEEEecCC---------------------CceeecccccccccCCcchh
Q psy9936 236 NIVEFLKP---------------------PEINFEPRRKANKAGGSVQR 263 (315)
Q Consensus 236 ~~i~~~~~---------------------~~~~~~~~~~~~~~~~~~~~ 263 (315)
+.|++|+. .+++|+|++..+++++.++.
T Consensus 382 g~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~ 430 (445)
T 2ovr_B 382 GTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT 430 (445)
T ss_dssp SEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSS
T ss_pred CeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCC
Confidence 99999976 45789999999999988875
No 101
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.5e-33 Score=242.78 Aligned_cols=208 Identities=11% Similarity=0.158 Sum_probs=171.6
Q ss_pred eeCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEcc---CceEEEEec-------------CCCceeEEE--EeecCcEEEE
Q psy9936 7 LDLQFGIYRMNYTKNGRHLLLGGKRGHVAAFDWV---RKTLACEMN-------------VMEEVYDIK--WLHLETMFAV 68 (315)
Q Consensus 7 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~---~~~~~~~~~-------------~~~~v~~~~--~~~~~~~l~~ 68 (315)
+....+|.+++|+|++++|++++.||.|++||+. +++....+. +...+.++. +++++.+|++
T Consensus 108 ~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 187 (437)
T 3gre_A 108 YDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVA 187 (437)
T ss_dssp EECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEE
T ss_pred ccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEE
Confidence 3447899999999999999999999999999984 443333221 345566666 5577888888
Q ss_pred Ee-CCeEEEEeCC-CCEEEEee---cCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEec-cCCCCeEEEEEcC
Q psy9936 69 AQ-KDWVYIYDNQ-GIELHCLK---VLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFS-AKKGKLSVMTQNP 142 (315)
Q Consensus 69 ~~-~~~i~i~~~~-~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~~v~~~~~~p 142 (315)
++ |+.|++||+. +..+..+. |...|.+++|+|++.+|++++.||.|++||+++++.+..+. .|...|.+++|+|
T Consensus 188 ~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~ 267 (437)
T 3gre_A 188 LTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQ 267 (437)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECT
T ss_pred EeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEecc
Confidence 87 8999999994 45555554 56899999999999999999999999999999999998876 6777899996654
Q ss_pred ----CCCEEEEEcCCCeEEEEcCCCCcceeEeec--------------------------ccccEEEEEECCCCCEEEEe
Q psy9936 143 ----YNACICLGHRNGTVTMWSPTVQKPLASLLC--------------------------HKAGIQSVAVNHTGTYMATS 192 (315)
Q Consensus 143 ----~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--------------------------~~~~i~~~~~sp~g~~l~~~ 192 (315)
++.+|++|+.|+.|++||+++++.+..+.+ |...|++++|+ ++.+|++|
T Consensus 268 ~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~ 346 (437)
T 3gre_A 268 FYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTD 346 (437)
T ss_dssp TTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEE
T ss_pred ccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEec
Confidence 677999999999999999999887776654 45568888998 77899999
Q ss_pred eCCCcEEEEEccCCCCCeeEeccC
Q psy9936 193 AGDSQLRIWDVRNLEGPLNTFRTR 216 (315)
Q Consensus 193 ~~d~~i~iwd~~~~~~~~~~~~~~ 216 (315)
+.|+.|++||+.++ ++...+..+
T Consensus 347 ~~d~~i~~wd~~~~-~~~~~~~~~ 369 (437)
T 3gre_A 347 EATSSIVMFSLNEL-SSSKAVISP 369 (437)
T ss_dssp GGGTEEEEEETTCG-GGCEEEECC
T ss_pred CCCCeEEEEECCCc-ccceEEecc
Confidence 99999999999998 777777653
No 102
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=3.2e-32 Score=239.19 Aligned_cols=249 Identities=13% Similarity=0.238 Sum_probs=210.4
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCC-CCEEEE
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQ-GIELHC 86 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~-~~~~~~ 86 (315)
..+|.++++ ++++|++|+.||.|++||+.+++....+. |...|.+++| ++.+|++++ ||.|++||+. +..+..
T Consensus 133 ~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~ 208 (435)
T 1p22_A 133 SKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNT 208 (435)
T ss_dssp CCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEE
T ss_pred CCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 456888776 78999999999999999999999888887 8899999998 677888776 8999999995 455555
Q ss_pred ee-cCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEE---EEeccCCCCeEEEEEcCCCCEEEEEcCCCeEEEEcCC
Q psy9936 87 LK-VLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIV---SDFSAKKGKLSVMTQNPYNACICLGHRNGTVTMWSPT 162 (315)
Q Consensus 87 ~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~---~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~~ 162 (315)
+. |...|.+++|++ ..+++++.||.|++||+.++... ..+.+|...|.+++| +++++++|+.|+.|++||++
T Consensus 209 ~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~ 284 (435)
T 1p22_A 209 LIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTS 284 (435)
T ss_dssp ECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETT
T ss_pred EcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECC
Confidence 43 558899999974 58999999999999999887654 667789999999999 78899999999999999999
Q ss_pred CCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-CceeEEEccCCeEEEEcCCEEEec
Q psy9936 163 VQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-PINNLAFSQRGLLATSRGNIVEFL 241 (315)
Q Consensus 163 ~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~g~~~~~~~~~i~~~ 241 (315)
+++.+..+.+|...|.+++| ++.++++|+.||.|++||++++ .++..+..|. .|.+++|++.-.++++.|+.|++|
T Consensus 285 ~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~~~~~~~~l~sg~~dg~i~vw 361 (435)
T 1p22_A 285 TCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVW 361 (435)
T ss_dssp TCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTC-CEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEE
T ss_pred cCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCC-CEEEEEeCCcCcEEEEEecCCEEEEEeCCCcEEEE
Confidence 99999999999999999999 4689999999999999999998 8888888776 699999954435566679999999
Q ss_pred CC-------------------------CceeecccccccccCCcchhhhhhhhhH
Q psy9936 242 KP-------------------------PEINFEPRRKANKAGGSVQRAKVKKIVR 271 (315)
Q Consensus 242 ~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (315)
++ .+++| ++..+++++.++.++.+....
T Consensus 362 d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~ 414 (435)
T 1p22_A 362 DLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLN 414 (435)
T ss_dssp EHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC---
T ss_pred ECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCC
Confidence 74 34555 778899999999888776543
No 103
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-32 Score=241.28 Aligned_cols=223 Identities=13% Similarity=0.083 Sum_probs=189.5
Q ss_pred CcEEEEEEcCCCCEE-EEEcCCCeEEEEEcc--CceEEEEe---cCCCceeEEEEeecCcEEEEEe-CCeEEEEeCCCCE
Q psy9936 11 FGIYRMNYTKNGRHL-LLGGKRGHVAAFDWV--RKTLACEM---NVMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGIE 83 (315)
Q Consensus 11 ~~v~~~~~s~~~~~l-~~~~~dg~i~v~~~~--~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~~ 83 (315)
..|.+++|+|++++| ++++.||.|++|++. +++....+ .+...|.+++|+|++.+|++++ ++.|++|++....
T Consensus 103 ~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~ 182 (450)
T 2vdu_B 103 SYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIP 182 (450)
T ss_dssp CCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCC
T ss_pred CceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcc
Confidence 479999999999996 899999999999998 77777666 3668899999999999998887 7999999984322
Q ss_pred E------EEeecCCceEEEEEcCC---CceEEEEcCCCeEEEEEccCCeEEEE-eccCCCCeEEEEEcCCCCEEEEEcCC
Q psy9936 84 L------HCLKVLNKVTRMEFLPY---HFLLATASEEGYLSWLDTSIGKIVSD-FSAKKGKLSVMTQNPYNACICLGHRN 153 (315)
Q Consensus 84 ~------~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~~~d~~~~~~~~~-~~~~~~~v~~~~~~p~~~~l~~~~~d 153 (315)
. ....|...|.+++|+|+ +.+|++++.|+.|++||+.+++.+.. +.+|...|.+++|+ ++++|++++.|
T Consensus 183 ~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d 261 (450)
T 2vdu_B 183 EEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGD 261 (450)
T ss_dssp CSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESS
T ss_pred cccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCC
Confidence 1 12346689999999999 99999999999999999999988877 56899999999999 99999999999
Q ss_pred CeEEEEcCCCCcceeEeecc-------------------------cccEEEEEECCCCCEEEEee-CCCcEEEEEc--cC
Q psy9936 154 GTVTMWSPTVQKPLASLLCH-------------------------KAGIQSVAVNHTGTYMATSA-GDSQLRIWDV--RN 205 (315)
Q Consensus 154 ~~i~i~d~~~~~~~~~~~~~-------------------------~~~i~~~~~sp~g~~l~~~~-~d~~i~iwd~--~~ 205 (315)
+.|++||+++++++..+..+ ...|.+++|+|++++|++++ .|+.|++|++ ..
T Consensus 262 ~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~ 341 (450)
T 2vdu_B 262 DKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQ 341 (450)
T ss_dssp SEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSS
T ss_pred CeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCC
Confidence 99999999999888877632 35689999999999999998 8999999999 33
Q ss_pred CC--CCeeEeccCCCceeEEEccCCeEEEEc
Q psy9936 206 LE--GPLNTFRTRTPINNLAFSQRGLLATSR 234 (315)
Q Consensus 206 ~~--~~~~~~~~~~~v~~~~~s~~g~~~~~~ 234 (315)
.. .++..+..+..+.+++|+|++.+++..
T Consensus 342 ~~~l~~~~~~~~~~~v~~~~~~~~~~~v~~~ 372 (450)
T 2vdu_B 342 KGDLALKQIITFPYNVISLSAHNDEFQVTLD 372 (450)
T ss_dssp TTCEEEEEEEECSSCEEEEEEETTEEEEEEC
T ss_pred CCceeeccEeccCCceEEEEecCCcEEEEEe
Confidence 21 345556677789999999977666653
No 104
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6e-34 Score=249.92 Aligned_cols=228 Identities=10% Similarity=0.049 Sum_probs=181.3
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEecCCC-----ceeEEEEeecCcEEEEEe-CCeEEEEeCCCCE
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMNVME-----EVYDIKWLHLETMFAVAQ-KDWVYIYDNQGIE 83 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~~ 83 (315)
...|.+++|||+|++||+++.||.|++|+.++ ++..+.|.. .+.+++|+|||++|++++ ||+|++||+.++.
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~ 162 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNS 162 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCT
T ss_pred CCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCc
Confidence 67899999999999999999999999999654 555555443 599999999999999998 8999999996552
Q ss_pred --------EEEee-----cCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeE---EEEe-ccCCCCeEEEEEcCCCCE
Q psy9936 84 --------LHCLK-----VLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKI---VSDF-SAKKGKLSVMTQNPYNAC 146 (315)
Q Consensus 84 --------~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~---~~~~-~~~~~~v~~~~~~p~~~~ 146 (315)
+..+. |...|.+++|+|+| +++++.|++|++||+..+.. .+.+ .+|...|.+++|+ |++
T Consensus 163 l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~ 238 (588)
T 2j04_A 163 ENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYK 238 (588)
T ss_dssp TTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTE
T ss_pred cccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCE
Confidence 34432 34689999999999 78888899999999987763 3456 4788899999999 689
Q ss_pred EEEEcCCCeEEEEcCCCCcceeEeecccccEEEEEE--CCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCCCceeEEE
Q psy9936 147 ICLGHRNGTVTMWSPTVQKPLASLLCHKAGIQSVAV--NHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRTPINNLAF 224 (315)
Q Consensus 147 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~--sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 224 (315)
|++++ +++|++||+.+++......+|.+.+..++| +|++..|++++.||+ ++|... .+++
T Consensus 239 LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d----------------~~~~ 300 (588)
T 2j04_A 239 VVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED----------------ELHV 300 (588)
T ss_dssp EEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS----------------SEEE
T ss_pred EEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec----------------cEEE
Confidence 99887 699999999987763433389999999999 999999999999999 999875 1446
Q ss_pred ccCCeEEEEcCCEEEecCC--------------CceeecccccccccCCcc
Q psy9936 225 SQRGLLATSRGNIVEFLKP--------------PEINFEPRRKANKAGGSV 261 (315)
Q Consensus 225 s~~g~~~~~~~~~i~~~~~--------------~~~~~~~~~~~~~~~~~~ 261 (315)
+||+.++++.|++++.|+. .+++|+|||+.+|.++..
T Consensus 301 spd~~l~a~~d~~v~lW~~~g~~l~~~~~~~~I~~va~SPdG~~lA~~~~i 351 (588)
T 2j04_A 301 TADNIIAPYLEKKFKKWSTIWNEFNNYETTLVIHGISLSPDGYSIAIVYDM 351 (588)
T ss_dssp ECCCSSHHHHHHHHHHTTTTTTSSSSSCCEEEEEEEEECTTSSEEEEEEEE
T ss_pred CCCceEEEEcCCEEEEEECCCCceeeeccceEEEEEEECCCCCEEEEEEec
Confidence 6666555555666666654 336666666666655544
No 105
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.5e-33 Score=237.36 Aligned_cols=220 Identities=13% Similarity=0.125 Sum_probs=181.9
Q ss_pred CCCceeEEEEeecCcEEEEEe-CCeEEEEeCCCCE---EEEe-ecCCceEEEEEcC--CCceEEEEcCCCeEEEEEccCC
Q psy9936 50 VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGIE---LHCL-KVLNKVTRMEFLP--YHFLLATASEEGYLSWLDTSIG 122 (315)
Q Consensus 50 ~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~~---~~~~-~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~~d~~~~ 122 (315)
|.+.|++++|+|+|++|++++ |++|++||+.... +..+ .|...|.+++|+| ++.+|++++.|++|++||++++
T Consensus 12 H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~ 91 (316)
T 3bg1_A 12 HEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENG 91 (316)
T ss_dssp --CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSS
T ss_pred ccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCC
Confidence 889999999999999999887 8999999995432 2333 4678999999986 4889999999999999999887
Q ss_pred --eEEEEeccCCCCeEEEEEcCC--CCEEEEEcCCCeEEEEcCCCCcc---eeEeecccccEEEEEECCC----------
Q psy9936 123 --KIVSDFSAKKGKLSVMTQNPY--NACICLGHRNGTVTMWSPTVQKP---LASLLCHKAGIQSVAVNHT---------- 185 (315)
Q Consensus 123 --~~~~~~~~~~~~v~~~~~~p~--~~~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~~~i~~~~~sp~---------- 185 (315)
.....+.+|...|.+++|+|+ +.+|++|+.|+.|++||++++.. ...+.+|...+.+++|+|+
T Consensus 92 ~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 171 (316)
T 3bg1_A 92 TWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHP 171 (316)
T ss_dssp CCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------C
T ss_pred cceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccc
Confidence 466678889999999999998 78999999999999999987632 3455689999999999998
Q ss_pred -------CCEEEEeeCCCcEEEEEccCCC--CCeeEeccCC-CceeEEEccCC----e--EEEEcCCEEEecCC------
Q psy9936 186 -------GTYMATSAGDSQLRIWDVRNLE--GPLNTFRTRT-PINNLAFSQRG----L--LATSRGNIVEFLKP------ 243 (315)
Q Consensus 186 -------g~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~-~v~~~~~s~~g----~--~~~~~~~~i~~~~~------ 243 (315)
+.+|++|+.|+.|++||++... .++..+..|. .|.+++|+|++ . +.++.|++|++|++
T Consensus 172 ~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~ 251 (316)
T 3bg1_A 172 SGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSN 251 (316)
T ss_dssp CSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCC
T ss_pred cccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCcccc
Confidence 4789999999999999997541 2455566665 69999999986 3 34456999999953
Q ss_pred --------------CceeecccccccccCCcchhhhhhhh
Q psy9936 244 --------------PEINFEPRRKANKAGGSVQRAKVKKI 269 (315)
Q Consensus 244 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (315)
.+++|+|++.++++++.++.++.+..
T Consensus 252 ~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~ 291 (316)
T 3bg1_A 252 TWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKE 291 (316)
T ss_dssp CCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEE
T ss_pred chhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEE
Confidence 46889999999999999998887753
No 106
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=4.5e-32 Score=237.89 Aligned_cols=268 Identities=14% Similarity=0.209 Sum_probs=213.6
Q ss_pred EEeeCCCcEEEEEEcCCC----------CEEEEEcCC----CeEEEEEcc--------------------------Cce-
Q psy9936 5 FDLDLQFGIYRMNYTKNG----------RHLLLGGKR----GHVAAFDWV--------------------------RKT- 43 (315)
Q Consensus 5 ~~~~~~~~v~~~~~s~~~----------~~l~~~~~d----g~i~v~~~~--------------------------~~~- 43 (315)
+...+.-+..++.|.|+. .++++|+.. ..|.++++. +++
T Consensus 40 ~~~~l~wp~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 119 (430)
T 2xyi_A 40 MTHALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKI 119 (430)
T ss_dssp EEEECSSCCSCEEECSCCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC--------------------------CE
T ss_pred hhcCCCCCceEEEECcccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccccccccccccccccccCCCCce
Confidence 344557788999999975 467777653 467777543 111
Q ss_pred -EEEEecCCCceeEEEEeec-CcEEEEEe-CCeEEEEeCCC-----------CEEEE-eecCCceEEEEEcCCCc-eEEE
Q psy9936 44 -LACEMNVMEEVYDIKWLHL-ETMFAVAQ-KDWVYIYDNQG-----------IELHC-LKVLNKVTRMEFLPYHF-LLAT 107 (315)
Q Consensus 44 -~~~~~~~~~~v~~~~~~~~-~~~l~~~~-~~~i~i~~~~~-----------~~~~~-~~~~~~v~~~~~~~~~~-~l~~ 107 (315)
....+.|.+.|++++|+|+ +.+|++++ +|.|++|++.. ..+.. ..|...+.+++|+|++. +|++
T Consensus 120 ~~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s 199 (430)
T 2xyi_A 120 EIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLS 199 (430)
T ss_dssp EEEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEE
T ss_pred EEEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEE
Confidence 2344558899999999997 67888876 89999999843 33333 34668899999999988 9999
Q ss_pred EcCCCeEEEEEccCCeE-------EEEeccCCCCeEEEEEcC-CCCEEEEEcCCCeEEEEcCCCC---cceeEeeccccc
Q psy9936 108 ASEEGYLSWLDTSIGKI-------VSDFSAKKGKLSVMTQNP-YNACICLGHRNGTVTMWSPTVQ---KPLASLLCHKAG 176 (315)
Q Consensus 108 ~~~d~~i~~~d~~~~~~-------~~~~~~~~~~v~~~~~~p-~~~~l~~~~~d~~i~i~d~~~~---~~~~~~~~~~~~ 176 (315)
++.||.|++||+.++.. ...+..|...|.+++|+| ++.+|++++.|+.|++||++++ +++..+..|...
T Consensus 200 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 279 (430)
T 2xyi_A 200 ASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAE 279 (430)
T ss_dssp ECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSC
T ss_pred EeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCC
Confidence 99999999999987321 455678999999999999 6779999999999999999987 577788889999
Q ss_pred EEEEEECCCCC-EEEEeeCCCcEEEEEccCCCCCeeEeccCC-CceeEEEccCC-e-E-EEEcCCEEEecCC--------
Q psy9936 177 IQSVAVNHTGT-YMATSAGDSQLRIWDVRNLEGPLNTFRTRT-PINNLAFSQRG-L-L-ATSRGNIVEFLKP-------- 243 (315)
Q Consensus 177 i~~~~~sp~g~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~g-~-~-~~~~~~~i~~~~~-------- 243 (315)
|++++|+|++. +|++|+.||.|++||+++...++..+..|. +|.+++|+|++ . + .++.|+.|++|+.
T Consensus 280 v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 359 (430)
T 2xyi_A 280 VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQS 359 (430)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCC
T ss_pred eEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccC
Confidence 99999999987 789999999999999998547788887665 79999999998 2 3 3446899998853
Q ss_pred ----------------------Cceeeccccc-ccccCCcchhhhhhhhhHH
Q psy9936 244 ----------------------PEINFEPRRK-ANKAGGSVQRAKVKKIVRE 272 (315)
Q Consensus 244 ----------------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 272 (315)
..++|+|++. ++++++.++.++.++....
T Consensus 360 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 360 TEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp HHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred ccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 5678999998 8889998888777765433
No 107
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-32 Score=257.50 Aligned_cols=184 Identities=14% Similarity=0.120 Sum_probs=154.9
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEe-CCeEEEEeCCCCEEEEe-
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGIELHCL- 87 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~~~~~~- 87 (315)
..+|.+++|+| |++|++++.|++|++||+.+++.+..+.+...|++++|+|++++|++++ ||.|++||+.+.....+
T Consensus 58 ~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~ 136 (902)
T 2oaj_A 58 RSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFK 136 (902)
T ss_dssp CCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccce
Confidence 67899999999 8899999999999999999999988888888999999999999999887 89999999976654321
Q ss_pred ------------ecCCceEEEEEcCC-CceEEEEcCCCeEEEEEccCCeEEEEeccC------------------CCCeE
Q psy9936 88 ------------KVLNKVTRMEFLPY-HFLLATASEEGYLSWLDTSIGKIVSDFSAK------------------KGKLS 136 (315)
Q Consensus 88 ------------~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~------------------~~~v~ 136 (315)
.|..+|.+++|+|+ +..+++++.||.| +||+++++.+..+..| ...|.
T Consensus 137 i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~ 215 (902)
T 2oaj_A 137 LDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVI 215 (902)
T ss_dssp ECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEE
T ss_pred eccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeE
Confidence 24578999999996 5789999999999 9999999988888765 46799
Q ss_pred EEEEcCCCCEEEEEcCCCeEEEEcCCCCcceeE--e---ec-------------ccccEEEEEEC----CCC-CEEEEee
Q psy9936 137 VMTQNPYNACICLGHRNGTVTMWSPTVQKPLAS--L---LC-------------HKAGIQSVAVN----HTG-TYMATSA 193 (315)
Q Consensus 137 ~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~~~~--~---~~-------------~~~~i~~~~~s----p~g-~~l~~~~ 193 (315)
+++|+|+|++|++|+.|+.|++||+++++++.. + .. |..+|++++|+ |++ .+|++|+
T Consensus 216 ~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~ 295 (902)
T 2oaj_A 216 QSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHK 295 (902)
T ss_dssp EEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEE
T ss_pred EEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCC
Confidence 999999999999999999999999999887653 2 11 34579999995 443 4566664
Q ss_pred CC
Q psy9936 194 GD 195 (315)
Q Consensus 194 ~d 195 (315)
.|
T Consensus 296 ~~ 297 (902)
T 2oaj_A 296 SI 297 (902)
T ss_dssp CS
T ss_pred CC
Confidence 43
No 108
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8e-32 Score=231.49 Aligned_cols=223 Identities=13% Similarity=0.154 Sum_probs=186.2
Q ss_pred EEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCCCC---EEEEe-ecCCceEEEEEcCC--CceEEEEcCCCeEEE
Q psy9936 45 ACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGI---ELHCL-KVLNKVTRMEFLPY--HFLLATASEEGYLSW 116 (315)
Q Consensus 45 ~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~---~~~~~-~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~ 116 (315)
...+. |...|.+++|+|++++|++++ |+.|++|++... .+..+ .|...|.+++|+|+ +.+|++++.||.|++
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~i 83 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 83 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred cEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEE
Confidence 34444 889999999999999999886 899999998532 22233 36689999999987 899999999999999
Q ss_pred EEccCCe--EEEEeccCCCCeEEEEEcCC--CCEEEEEcCCCeEEEEcCCCCc--ceeEeecccccEEEEEECC------
Q psy9936 117 LDTSIGK--IVSDFSAKKGKLSVMTQNPY--NACICLGHRNGTVTMWSPTVQK--PLASLLCHKAGIQSVAVNH------ 184 (315)
Q Consensus 117 ~d~~~~~--~~~~~~~~~~~v~~~~~~p~--~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~i~~~~~sp------ 184 (315)
||+.+++ .+..+..|...|.+++|+|+ +.+|++++.|+.|++||++++. ....+..|...|.+++|+|
T Consensus 84 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 163 (379)
T 3jrp_A 84 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 163 (379)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----
T ss_pred EEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccccc
Confidence 9999987 67778889999999999999 9999999999999999999873 3445668999999999999
Q ss_pred -------CCCEEEEeeCCCcEEEEEccCCCCC----eeEeccCC-CceeEEEccC---CeE--EEEcCCEEEecCC----
Q psy9936 185 -------TGTYMATSAGDSQLRIWDVRNLEGP----LNTFRTRT-PINNLAFSQR---GLL--ATSRGNIVEFLKP---- 243 (315)
Q Consensus 185 -------~g~~l~~~~~d~~i~iwd~~~~~~~----~~~~~~~~-~v~~~~~s~~---g~~--~~~~~~~i~~~~~---- 243 (315)
++.+|++++.|+.|++||+++. .. ...+..|. +|.+++|+|+ +.+ .++.|+.|++|+.
T Consensus 164 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 164 GEHNGTKESRKFVTGGADNLVKIWKYNSD-AQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp ------CTTCEEEEEETTSCEEEEEEETT-TTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred ccccCCCCCCEEEEEeCCCeEEEEEecCC-CcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCC
Confidence 6999999999999999999876 43 34455555 6999999999 743 3445899998865
Q ss_pred -----------------CceeecccccccccCCcchhhhhhh
Q psy9936 244 -----------------PEINFEPRRKANKAGGSVQRAKVKK 268 (315)
Q Consensus 244 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (315)
.+++|+|+++++++++.++.++.+.
T Consensus 243 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~ 284 (379)
T 3jrp_A 243 GPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWK 284 (379)
T ss_dssp SCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEE
T ss_pred ccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEe
Confidence 4678999999999998887665554
No 109
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=2.1e-30 Score=224.16 Aligned_cols=235 Identities=11% Similarity=0.085 Sum_probs=200.2
Q ss_pred EeeCCCcEEEEEEcCCCCEE-EEEcCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEe--CCeEEEEeCCC-
Q psy9936 6 DLDLQFGIYRMNYTKNGRHL-LLGGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQ--KDWVYIYDNQG- 81 (315)
Q Consensus 6 ~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~~~~~- 81 (315)
.+.....+.+++|+|+|++| ++++.++.|++||+.+++....+.+...+.+++|+|++++|+++. ++.|++||+.+
T Consensus 27 ~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~ 106 (391)
T 1l0q_A 27 TIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSN 106 (391)
T ss_dssp EEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred EeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECCCCEEEEEECCCC
Confidence 34456679999999999977 677789999999999999998888777999999999999776554 68999999965
Q ss_pred CEEEEeecCCceEEEEEcCCCceE-EEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEE-EEEcCCCeEEEE
Q psy9936 82 IELHCLKVLNKVTRMEFLPYHFLL-ATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACI-CLGHRNGTVTMW 159 (315)
Q Consensus 82 ~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l-~~~~~d~~i~i~ 159 (315)
..+..+.+...+.+++|+|+++.+ ++++.++.|++||+.+++.+..+..+. .+..++|+|+++++ ++++.++.|++|
T Consensus 107 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~dg~~l~~~~~~~~~v~~~ 185 (391)
T 1l0q_A 107 TVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR-SPKGIAVTPDGTKVYVANFDSMSISVI 185 (391)
T ss_dssp EEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred eEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC-CcceEEECCCCCEEEEEeCCCCEEEEE
Confidence 444556667889999999999877 688889999999999999888887654 57999999999977 577889999999
Q ss_pred cCCCCcceeEeecccccEEEEEECCCCCEEEEee---CCCcEEEEEccCCCCCeeEeccCCCceeEEEccCCe-E-EE-E
Q psy9936 160 SPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSA---GDSQLRIWDVRNLEGPLNTFRTRTPINNLAFSQRGL-L-AT-S 233 (315)
Q Consensus 160 d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~---~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~-~-~~-~ 233 (315)
|+++++.+..+. +...+.+++|+|+|++|++++ .++.|++||+.++ +++..+..+..+.+++|+|+|. + ++ +
T Consensus 186 d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~-~~~~~~~~~~~~~~~~~s~dg~~l~~s~~ 263 (391)
T 1l0q_A 186 DTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN-KITARIPVGPDPAGIAVTPDGKKVYVALS 263 (391)
T ss_dssp ETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT-EEEEEEECCSSEEEEEECTTSSEEEEEET
T ss_pred ECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCC-eEEEEEecCCCccEEEEccCCCEEEEEcC
Confidence 999998777776 567889999999999999887 6899999999998 8888888888889999999994 3 33 3
Q ss_pred cCCEEEecCC
Q psy9936 234 RGNIVEFLKP 243 (315)
Q Consensus 234 ~~~~i~~~~~ 243 (315)
.++.|++|++
T Consensus 264 ~d~~v~v~d~ 273 (391)
T 1l0q_A 264 FXNTVSVIDT 273 (391)
T ss_dssp TTTEEEEEET
T ss_pred CCCEEEEEEC
Confidence 4899999987
No 110
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.7e-30 Score=216.94 Aligned_cols=235 Identities=13% Similarity=0.189 Sum_probs=193.1
Q ss_pred EeeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCCC-
Q psy9936 6 DLDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQG- 81 (315)
Q Consensus 6 ~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~- 81 (315)
.+.. ...|++++|+|++++|++|+.||.|++|++.+++.+..+. |...+.+ +++++.++++++ ++.+.+|+...
T Consensus 62 ~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~--~~~~~~~l~s~~~~~~~~~~~~~~~ 139 (318)
T 4ggc_A 62 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGS--LSWNSYILSSGSRSGHIHHHDVRVA 139 (318)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEE--EEEETTEEEEEETTSEEEEEETTSS
T ss_pred EecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEE--eecCCCEEEEEecCCceEeeecCCC
Confidence 3334 5679999999999999999999999999999999988877 6666655 455677888776 78999999843
Q ss_pred -CEEEE-eecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCe----EEEEeccCCCCeEEEEEcCCCCE---EEEEcC
Q psy9936 82 -IELHC-LKVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGK----IVSDFSAKKGKLSVMTQNPYNAC---ICLGHR 152 (315)
Q Consensus 82 -~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~----~~~~~~~~~~~v~~~~~~p~~~~---l~~~~~ 152 (315)
..+.. ..|...+..+.+++++.++++++.|+.|++||+.+++ .......+.+.+..++++|++.. +++++.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 219 (318)
T 4ggc_A 140 EHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS 219 (318)
T ss_dssp SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTT
T ss_pred ceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCC
Confidence 33333 3466889999999999999999999999999998764 23445567888999999997763 346778
Q ss_pred CCeEEEEcCCCCcceeEeecccccEEEEEECCCCCEEEEee--CCCcEEEEEccCCCCCeeEeccCC-CceeEEEccCCe
Q psy9936 153 NGTVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSA--GDSQLRIWDVRNLEGPLNTFRTRT-PINNLAFSQRGL 229 (315)
Q Consensus 153 d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~g~ 229 (315)
++.|++||.+......... +...+..+.|+|++..+++++ .|+.|++||++++ +++..+.+|. +|++++|+|+|.
T Consensus 220 ~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~-~~~~~l~gH~~~V~~l~~spdg~ 297 (318)
T 4ggc_A 220 DRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM-AKVAELKGHTSRVLSLTMSPDGA 297 (318)
T ss_dssp TCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC-CEEEEECCCSSCEEEEEECTTSS
T ss_pred CCEEEEEeccccccccccc-ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCC-cEEEEEcCCCCCEEEEEEcCCCC
Confidence 9999999999887665554 778899999999999887654 7999999999999 9999999886 699999999995
Q ss_pred --EEEEcCCEEEecCCC
Q psy9936 230 --LATSRGNIVEFLKPP 244 (315)
Q Consensus 230 --~~~~~~~~i~~~~~~ 244 (315)
+.++.|++|++|+..
T Consensus 298 ~l~S~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 298 TVASAAADETLRLWRCF 314 (318)
T ss_dssp CEEEEETTTEEEEECCS
T ss_pred EEEEEecCCeEEEEECC
Confidence 344569999999964
No 111
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=4.4e-31 Score=231.94 Aligned_cols=228 Identities=14% Similarity=0.242 Sum_probs=193.6
Q ss_pred EEeeC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEE-eCCeEEEEeCCC
Q psy9936 5 FDLDL-QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVA-QKDWVYIYDNQG 81 (315)
Q Consensus 5 ~~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~~~~~ 81 (315)
..+.. ..+|.+++| ++++|++|+.||.|++||+.+++....+. |...|.+++|++ .+++++ .|+.|++||+..
T Consensus 167 ~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~ 242 (435)
T 1p22_A 167 RILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMAS 242 (435)
T ss_dssp EEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSS
T ss_pred EEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCC
Confidence 34455 778999988 78899999999999999999999888887 888999999974 355555 489999999954
Q ss_pred C-EE----EEeecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCeE
Q psy9936 82 I-EL----HCLKVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNGTV 156 (315)
Q Consensus 82 ~-~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i 156 (315)
. .. ....|...|.+++| +++++++++.||.|++||+.+++.+..+..|...+.+++| +++++++|+.||.|
T Consensus 243 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i 318 (435)
T 1p22_A 243 PTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTI 318 (435)
T ss_dssp SSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCE
T ss_pred CCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeE
Confidence 3 22 22346688999999 6789999999999999999999999999999999999998 46899999999999
Q ss_pred EEEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCC---------CeeEeccCC-CceeEEEcc
Q psy9936 157 TMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEG---------PLNTFRTRT-PINNLAFSQ 226 (315)
Q Consensus 157 ~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~---------~~~~~~~~~-~v~~~~~s~ 226 (315)
++||+++++++..+.+|...|.+++| ++.+|++|+.||.|++||+.++ . ++..+..|. +|.+++|++
T Consensus 319 ~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~h~~~v~~l~~~~ 395 (435)
T 1p22_A 319 RLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAA-LDPRAPAGTLCLRTLVEHSGRVFRLQFDE 395 (435)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHH-TSTTSCTTTTEEEEECCCSSCCCCEEECS
T ss_pred EEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCC-CCccccccchheeeccCCCCCeEEEEeCC
Confidence 99999999999999999999999998 7889999999999999999865 3 567777766 699999954
Q ss_pred CCeEEEEcCCEEEecCC
Q psy9936 227 RGLLATSRGNIVEFLKP 243 (315)
Q Consensus 227 ~g~~~~~~~~~i~~~~~ 243 (315)
.-.+.++.|+.|++|+.
T Consensus 396 ~~l~s~s~Dg~i~iwd~ 412 (435)
T 1p22_A 396 FQIVSSSHDDTILIWDF 412 (435)
T ss_dssp SCEEECCSSSEEEEEC-
T ss_pred CEEEEEeCCCEEEEEEC
Confidence 43455556999999996
No 112
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=7.5e-32 Score=228.81 Aligned_cols=227 Identities=13% Similarity=0.193 Sum_probs=192.5
Q ss_pred CCcEEEEEEcCCCC-EEEEEcCCCeEEEEEc-cCceEEEEec--CCCceeEEEEeecCcEEEEEe-CCeEEEEeCC----
Q psy9936 10 QFGIYRMNYTKNGR-HLLLGGKRGHVAAFDW-VRKTLACEMN--VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQ---- 80 (315)
Q Consensus 10 ~~~v~~~~~s~~~~-~l~~~~~dg~i~v~~~-~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~---- 80 (315)
...|.+++|+|+++ +|++++.||.|++||+ .+++...... |...|.+++|+| +.+|++++ |+.|++||+.
T Consensus 56 ~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~ 134 (342)
T 1yfq_A 56 KHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGD 134 (342)
T ss_dssp SSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTT
T ss_pred CCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEccccccc
Confidence 78999999999999 9999999999999999 8887766566 888999999999 87777776 8999999984
Q ss_pred ------CCEEEEeecCCceEEEEEcCCCceEEEEcCCCeEEEEEccC-Ce--EEEEeccCCCCeEEEEEcC-CCCEEEEE
Q psy9936 81 ------GIELHCLKVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSI-GK--IVSDFSAKKGKLSVMTQNP-YNACICLG 150 (315)
Q Consensus 81 ------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~-~~--~~~~~~~~~~~v~~~~~~p-~~~~l~~~ 150 (315)
+..+..+.+...+.+++|+|++ +++++.++.|++||+++ +. .......|...+.+++|+| ++++++++
T Consensus 135 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~ 212 (342)
T 1yfq_A 135 GVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACS 212 (342)
T ss_dssp BCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEE
T ss_pred ccccccCCeeeEEeeCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEE
Confidence 2323344566899999999987 89999999999999987 54 3334456788899999999 99999999
Q ss_pred cCCCeEEEEcCCCC------cceeEeecccc---------cEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEecc
Q psy9936 151 HRNGTVTMWSPTVQ------KPLASLLCHKA---------GIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRT 215 (315)
Q Consensus 151 ~~d~~i~i~d~~~~------~~~~~~~~~~~---------~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 215 (315)
+.||.|++|+++.. +.+..+..|.. .|.+++|+|++++|++++.||.|++||+.++ +++..+..
T Consensus 213 ~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~ 291 (342)
T 1yfq_A 213 SIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTR-KKIKNFAK 291 (342)
T ss_dssp ETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTT-EEEEECCC
T ss_pred ecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccH-hHhhhhhc
Confidence 99999999999887 78888888865 9999999999999999999999999999998 88888887
Q ss_pred C-C-CceeEEEccCCeE--EEEcCCE-EEecC
Q psy9936 216 R-T-PINNLAFSQRGLL--ATSRGNI-VEFLK 242 (315)
Q Consensus 216 ~-~-~v~~~~~s~~g~~--~~~~~~~-i~~~~ 242 (315)
| . +|.+++ |+|.+ .++.|+. .+.+.
T Consensus 292 ~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 292 FNEDSVVKIA--CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp CSSSEEEEEE--ECSSEEEEEEECTHHHHCSS
T ss_pred ccCCCceEec--CCCCeEEEEecCCccccccc
Confidence 6 5 688988 88853 4455776 44433
No 113
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=6.4e-31 Score=231.49 Aligned_cols=251 Identities=13% Similarity=0.185 Sum_probs=210.3
Q ss_pred EeeC-CCc-EEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCCC
Q psy9936 6 DLDL-QFG-IYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQG 81 (315)
Q Consensus 6 ~~~~-~~~-v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~ 81 (315)
.+.. .+. +.+ ++++|++|++|+.||.|++||+.+++....+. |...|.+++|+ +.++++++ |+.|++||+..
T Consensus 113 ~l~~h~~~v~~~--~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~ 188 (445)
T 2ovr_B 113 VLKGHDDHVITC--LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAET 188 (445)
T ss_dssp EEECSTTSCEEE--EEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTT
T ss_pred EecccCCCcEEE--EEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCc
Confidence 3445 344 455 45568999999999999999999999988887 88999999997 45666665 89999999954
Q ss_pred -CEEEEee-cCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCeEEEE
Q psy9936 82 -IELHCLK-VLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNGTVTMW 159 (315)
Q Consensus 82 -~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~ 159 (315)
..+..+. |...|.++.|+ +..+++++.||.|++||+.+++.+..+..|...+.+++| +++++++|+.|+.|++|
T Consensus 189 ~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iw 264 (445)
T 2ovr_B 189 GECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVW 264 (445)
T ss_dssp TEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEE
T ss_pred CcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEE
Confidence 4444443 56889999996 567999999999999999999999999999999999999 78899999999999999
Q ss_pred cCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-CceeEEEccCCeEEEEcCCEE
Q psy9936 160 SPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-PINNLAFSQRGLLATSRGNIV 238 (315)
Q Consensus 160 d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~g~~~~~~~~~i 238 (315)
|+++++++..+.+|...|.+++| ++.++++++.|+.|++||++++ +++..+..|. .+.++.++++-.++++.|+.|
T Consensus 265 d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i 341 (445)
T 2ovr_B 265 DPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETG-NCIHTLTGHQSLTSGMELKDNILVSGNADSTV 341 (445)
T ss_dssp EGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTC-CEEEEECCCCSCEEEEEEETTEEEEEETTSCE
T ss_pred ECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCC-CEEEEEcCCcccEEEEEEeCCEEEEEeCCCeE
Confidence 99999999999999999999999 7899999999999999999998 8888888776 578888865545666779999
Q ss_pred EecCC-------------------CceeecccccccccCCcchhhhhhhh
Q psy9936 239 EFLKP-------------------PEINFEPRRKANKAGGSVQRAKVKKI 269 (315)
Q Consensus 239 ~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (315)
++|+. .+++| ++.++++++.++.++.+..
T Consensus 342 ~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~v~iwd~ 389 (445)
T 2ovr_B 342 KIWDIKTGQCLQTLQGPNKHQSAVTCLQF--NKNFVITSSDDGTVKLWDL 389 (445)
T ss_dssp EEEETTTCCEEEEECSTTSCSSCEEEEEE--CSSEEEEEETTSEEEEEET
T ss_pred EEEECCCCcEEEEEccCCCCCCCEEEEEE--CCCEEEEEeCCCeEEEEEC
Confidence 99986 22344 4678999998887776653
No 114
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.1e-31 Score=232.59 Aligned_cols=224 Identities=11% Similarity=0.057 Sum_probs=160.3
Q ss_pred EcCCCCEEEEEcCCCeEEEEEccCceEEEE-----ec-CCCceeEEEEee--------cCcEEEEEe-CCeEEEEeCC-C
Q psy9936 18 YTKNGRHLLLGGKRGHVAAFDWVRKTLACE-----MN-VMEEVYDIKWLH--------LETMFAVAQ-KDWVYIYDNQ-G 81 (315)
Q Consensus 18 ~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~-----~~-~~~~v~~~~~~~--------~~~~l~~~~-~~~i~i~~~~-~ 81 (315)
+++++.+|++++.|++|++||..++..... +. |.+.|++++|+| |+++|++++ |++|+|||+. +
T Consensus 97 ~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~ 176 (393)
T 4gq1_A 97 SPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE 176 (393)
T ss_dssp CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT
T ss_pred cCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC
Confidence 445667899999999999999998865432 33 889999999998 789999887 8999999984 3
Q ss_pred CE-EEEeecCCceEEEEEcCCC-ceEEEEcCCCeEEEEEccCCeEEEEe-------------------------ccCCCC
Q psy9936 82 IE-LHCLKVLNKVTRMEFLPYH-FLLATASEEGYLSWLDTSIGKIVSDF-------------------------SAKKGK 134 (315)
Q Consensus 82 ~~-~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~~~~~-------------------------~~~~~~ 134 (315)
.. .....+..++.+++|+|++ .+|++++.|++|++||+.+++..... .+|...
T Consensus 177 ~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 256 (393)
T 4gq1_A 177 GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASS 256 (393)
T ss_dssp EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSS
T ss_pred ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccccc
Confidence 33 3456788999999999987 58999999999999999877543221 346667
Q ss_pred eEEEEEc-CCCCEEEEEcCCCeEEEEcCCCCcceeEeecccccEEEEEECC--------------------CCCEEEEee
Q psy9936 135 LSVMTQN-PYNACICLGHRNGTVTMWSPTVQKPLASLLCHKAGIQSVAVNH--------------------TGTYMATSA 193 (315)
Q Consensus 135 v~~~~~~-p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp--------------------~g~~l~~~~ 193 (315)
+.++.|+ |+++.|++++.|+.+++||+.+++....+..|...+..+.+.| ++.++++|+
T Consensus 257 v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs 336 (393)
T 4gq1_A 257 LANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHS 336 (393)
T ss_dssp CSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEET
T ss_pred ceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEEC
Confidence 8888886 7999999999999999999998876666665555444443333 344677888
Q ss_pred CCCcEEEEEccCCCCCeeEec-cCCCceeEEEccCCeEE-EEcCCEEEecC
Q psy9936 194 GDSQLRIWDVRNLEGPLNTFR-TRTPINNLAFSQRGLLA-TSRGNIVEFLK 242 (315)
Q Consensus 194 ~d~~i~iwd~~~~~~~~~~~~-~~~~v~~~~~s~~g~~~-~~~~~~i~~~~ 242 (315)
.||.|++||+.++ .+..... .+.+|++++|+|||.++ ++.++.+.+|.
T Consensus 337 ~Dg~V~lwd~~~~-~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv~lvr 386 (393)
T 4gq1_A 337 QHGLIQLINTYEK-DSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSVLLTR 386 (393)
T ss_dssp TTTEEEEEETTCT-TCCEEEEECSSCEEEEEECTTSSEEEEEESSEEEEEE
T ss_pred CCCEEEEEECCCC-cEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 9999999999998 6665554 44589999999999644 44566665554
No 115
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.2e-30 Score=228.67 Aligned_cols=257 Identities=11% Similarity=0.082 Sum_probs=208.0
Q ss_pred eeCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEe------cCCCceeEEEEeecCcEEEEEe-CCeEEEEeC
Q psy9936 7 LDLQFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEM------NVMEEVYDIKWLHLETMFAVAQ-KDWVYIYDN 79 (315)
Q Consensus 7 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~ 79 (315)
+.....+.+++|+|++.++++++.++.|++||+.+++....+ .|...+.+++|+|++.+++++. ++.|++||+
T Consensus 119 ~~~~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~ 198 (433)
T 3bws_A 119 FKTGFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDL 198 (433)
T ss_dssp EECSSCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEET
T ss_pred EcCCCCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEEC
Confidence 334556779999997778888888899999999999887643 2567899999999999998886 799999999
Q ss_pred CC-CEEEEee-cCCceEEEEEcCCCceEE-EEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEc-----
Q psy9936 80 QG-IELHCLK-VLNKVTRMEFLPYHFLLA-TASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGH----- 151 (315)
Q Consensus 80 ~~-~~~~~~~-~~~~v~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~----- 151 (315)
.+ ..+..+. +...+.+++|+|++..++ +++.++.|++||+.+++.+..+..+ ..+.+++|+|+|+++++++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~ 277 (433)
T 3bws_A 199 KTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASN 277 (433)
T ss_dssp TTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCT
T ss_pred CCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCc
Confidence 54 4445554 457899999999998775 5557999999999999988887754 4589999999999998887
Q ss_pred ---CCCeEEEEcCCCCcceeEeecccccEEEEEECCCCCEE-EEeeCCCcEEEEEccCCCCCeeEeccCCCceeEEEccC
Q psy9936 152 ---RNGTVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYM-ATSAGDSQLRIWDVRNLEGPLNTFRTRTPINNLAFSQR 227 (315)
Q Consensus 152 ---~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~ 227 (315)
.|+.|++||+++++.+..+ .|...+.+++|+|+++++ ++++.|+.|++||+.++ +.+..+.....+.+++|+|+
T Consensus 278 ~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~-~~~~~~~~~~~~~~~~~s~d 355 (433)
T 3bws_A 278 QESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEK-KVQKSIPVFDKPNTIALSPD 355 (433)
T ss_dssp TCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTT-EEEEEEECSSSEEEEEECTT
T ss_pred cccCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCC-cEEEEecCCCCCCeEEEcCC
Confidence 5889999999998777665 466788999999999755 66689999999999988 78888876678999999999
Q ss_pred Ce-EEE-Ec---------------CCEEEecCC---------------CceeecccccccccCCc-chhhhh
Q psy9936 228 GL-LAT-SR---------------GNIVEFLKP---------------PEINFEPRRKANKAGGS-VQRAKV 266 (315)
Q Consensus 228 g~-~~~-~~---------------~~~i~~~~~---------------~~~~~~~~~~~~~~~~~-~~~~~~ 266 (315)
|. +++ +. ||.|.+|++ ..++|+|+++.++.++. ++.++.
T Consensus 356 g~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v 427 (433)
T 3bws_A 356 GKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLDHQIRV 427 (433)
T ss_dssp SSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETTTTEEEE
T ss_pred CCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEECCCCeEEE
Confidence 95 333 33 358998876 56889999998877654 554443
No 116
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.3e-30 Score=222.97 Aligned_cols=227 Identities=12% Similarity=0.098 Sum_probs=180.2
Q ss_pred CcEEEEEEcCCCCEE-EEEcCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEeCCeEEEEeCCCC--EEEEe
Q psy9936 11 FGIYRMNYTKNGRHL-LLGGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQKDWVYIYDNQGI--ELHCL 87 (315)
Q Consensus 11 ~~v~~~~~s~~~~~l-~~~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~~~~--~~~~~ 87 (315)
.++..+++.++++.+ ++++.++.|++||..+++.+..+.+...|.++.|+++. ++++.++.|++||+... .+..+
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~--~~~~~~~~i~i~d~~~~~~~~~~~ 136 (355)
T 3vu4_A 59 RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREF--IVVSYGDVISVFKFGNPWKRITDD 136 (355)
T ss_dssp SCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEECSSCEEEEEECSSE--EEEEETTEEEEEESSTTCCBSSCC
T ss_pred CCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEECCCceEEEEEcCCE--EEEEEcCEEEEEECCCCceeeEEe
Confidence 357778899988877 46777899999999999999999888899999998764 55667999999999543 33333
Q ss_pred ecCCceEEEEEcCCCceEEE--EcCCCeEEEEEccCCe---------------E-EEEeccCCCCeEEEEEcCCCCEEEE
Q psy9936 88 KVLNKVTRMEFLPYHFLLAT--ASEEGYLSWLDTSIGK---------------I-VSDFSAKKGKLSVMTQNPYNACICL 149 (315)
Q Consensus 88 ~~~~~v~~~~~~~~~~~l~~--~~~d~~i~~~d~~~~~---------------~-~~~~~~~~~~v~~~~~~p~~~~l~~ 149 (315)
.. +...+++++ .++++ |+.+|.|++||+.++. + +..+.+|...|++++|+|+|++|++
T Consensus 137 ~~--~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s 212 (355)
T 3vu4_A 137 IR--FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVAT 212 (355)
T ss_dssp EE--EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEE
T ss_pred cc--CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEE
Confidence 33 445566777 55655 5889999999998765 2 6778899999999999999999999
Q ss_pred EcCCCe-EEEEcCCCCcceeEee-c-ccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCC-CCeeEe------------
Q psy9936 150 GHRNGT-VTMWSPTVQKPLASLL-C-HKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLE-GPLNTF------------ 213 (315)
Q Consensus 150 ~~~d~~-i~i~d~~~~~~~~~~~-~-~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~-~~~~~~------------ 213 (315)
|+.|++ |++||+++++++..+. + |...|++++|+|+|++|++++.|++|++||++... .....+
T Consensus 213 ~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (355)
T 3vu4_A 213 CSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSE 292 (355)
T ss_dssp EETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCS
T ss_pred EeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccc
Confidence 999998 9999999999999998 5 99999999999999999999999999999997651 111111
Q ss_pred ------cc----CCCceeEEEccCCeE--EEEcCCEEEecCC
Q psy9936 214 ------RT----RTPINNLAFSQRGLL--ATSRGNIVEFLKP 243 (315)
Q Consensus 214 ------~~----~~~v~~~~~s~~g~~--~~~~~~~i~~~~~ 243 (315)
.. ..+...++|+|+|.+ +.+.||.++.|+.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~ 334 (355)
T 3vu4_A 293 WSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKV 334 (355)
T ss_dssp SCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEE
T ss_pred cceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence 00 112477999999943 3345899998873
No 117
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.1e-30 Score=221.34 Aligned_cols=206 Identities=17% Similarity=0.270 Sum_probs=174.6
Q ss_pred eeC-CCcEEEEEEcC--CCCEEEEEcCCCeEEEEEccCc---------eEEEEec-CCCceeEEEEeec--CcEEEEEe-
Q psy9936 7 LDL-QFGIYRMNYTK--NGRHLLLGGKRGHVAAFDWVRK---------TLACEMN-VMEEVYDIKWLHL--ETMFAVAQ- 70 (315)
Q Consensus 7 ~~~-~~~v~~~~~s~--~~~~l~~~~~dg~i~v~~~~~~---------~~~~~~~-~~~~v~~~~~~~~--~~~l~~~~- 70 (315)
+.. ..+|.+++|+| ++++|++++.||.|++||+.++ +....+. |...|.+++|+|+ +.+|++++
T Consensus 53 ~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~ 132 (351)
T 3f3f_A 53 WRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGN 132 (351)
T ss_dssp EECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET
T ss_pred eccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecC
Confidence 444 78899999999 6999999999999999999876 4455555 8889999999999 88888876
Q ss_pred CCeEEEEeCCCCE-EEE--------------eecCCceEEEEEcCC---CceEEEEcCCCeEEEEEccCCeE--EEEecc
Q psy9936 71 KDWVYIYDNQGIE-LHC--------------LKVLNKVTRMEFLPY---HFLLATASEEGYLSWLDTSIGKI--VSDFSA 130 (315)
Q Consensus 71 ~~~i~i~~~~~~~-~~~--------------~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~~~d~~~~~~--~~~~~~ 130 (315)
|+.|++||+.... +.. ..+...+.+++|+|+ +.++++++.++.+.+|+...+.. +..+.+
T Consensus 133 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (351)
T 3f3f_A 133 DGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPG 212 (351)
T ss_dssp TCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCC
T ss_pred CCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCC
Confidence 8999999984321 110 124478999999997 89999999999998888877764 677888
Q ss_pred CCCCeEEEEEcCCC----CEEEEEcCCCeEEEEcCCCC------------------------------------------
Q psy9936 131 KKGKLSVMTQNPYN----ACICLGHRNGTVTMWSPTVQ------------------------------------------ 164 (315)
Q Consensus 131 ~~~~v~~~~~~p~~----~~l~~~~~d~~i~i~d~~~~------------------------------------------ 164 (315)
|...|++++|+|++ ++|++++.||.|++||++++
T Consensus 213 h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (351)
T 3f3f_A 213 HKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQS 292 (351)
T ss_dssp CCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CC
T ss_pred CCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecc
Confidence 99999999999998 89999999999999998864
Q ss_pred ----cceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEe
Q psy9936 165 ----KPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTF 213 (315)
Q Consensus 165 ----~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~ 213 (315)
+.+..+.+|...|++++|+|++++|++++.||.|++||+.++ ..+..+
T Consensus 293 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~-~~~~~~ 344 (351)
T 3f3f_A 293 NLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYS-NEFKCM 344 (351)
T ss_dssp SEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTT-SCEEEE
T ss_pred cccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcC-cchhhe
Confidence 456677789999999999999999999999999999999987 554443
No 118
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=8.8e-30 Score=220.26 Aligned_cols=242 Identities=13% Similarity=0.107 Sum_probs=199.9
Q ss_pred CEEEEEcCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEE-EE-eCCeEEEEeCC-CCEEEEeecCCceEEEEEc
Q psy9936 23 RHLLLGGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFA-VA-QKDWVYIYDNQ-GIELHCLKVLNKVTRMEFL 99 (315)
Q Consensus 23 ~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~-~~~~i~i~~~~-~~~~~~~~~~~~v~~~~~~ 99 (315)
..+++++.++.|++||+.+++....+.+...+.+++|+|++++++ ++ .++.|++||+. ++.+..+.....+.+++|+
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~s 82 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVS 82 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEEC
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEEC
Confidence 367788899999999999999998888777799999999998764 44 48999999995 4555566667799999999
Q ss_pred CCCceEE-EEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEE-EEEcCCCeEEEEcCCCCcceeEeecccccE
Q psy9936 100 PYHFLLA-TASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACI-CLGHRNGTVTMWSPTVQKPLASLLCHKAGI 177 (315)
Q Consensus 100 ~~~~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i 177 (315)
|++++|+ +++.++.|++||+.+++.+..+..+ ..+.+++|+|+++.| ++++.++.|++||+++++.+..+..+ ..+
T Consensus 83 pdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~ 160 (391)
T 1l0q_A 83 PDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSP 160 (391)
T ss_dssp TTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSE
T ss_pred CCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCc
Confidence 9999775 4556799999999999888877754 468999999999977 68888999999999999888888754 556
Q ss_pred EEEEECCCCCEE-EEeeCCCcEEEEEccCCCCCeeEeccCCCceeEEEccCCe--EEEE---cCCEEEecCC--------
Q psy9936 178 QSVAVNHTGTYM-ATSAGDSQLRIWDVRNLEGPLNTFRTRTPINNLAFSQRGL--LATS---RGNIVEFLKP-------- 243 (315)
Q Consensus 178 ~~~~~sp~g~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~--~~~~---~~~~i~~~~~-------- 243 (315)
.+++|+|+|++| ++++.++.|++||++++ ..+..+..+..+.+++|+|+|. ++++ .++.|++|++
T Consensus 161 ~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~-~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~ 239 (391)
T 1l0q_A 161 KGIAVTPDGTKVYVANFDSMSISVIDTVTN-SVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITAR 239 (391)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETTTT-EEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEE
T ss_pred ceEEECCCCCEEEEEeCCCCEEEEEECCCC-eEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEE
Confidence 999999999987 56778899999999998 7777777777899999999994 3334 4789999886
Q ss_pred -------Cceeeccccccc-ccCCcchhhhhh
Q psy9936 244 -------PEINFEPRRKAN-KAGGSVQRAKVK 267 (315)
Q Consensus 244 -------~~~~~~~~~~~~-~~~~~~~~~~~~ 267 (315)
..++|+|+++.+ ++++.++.++..
T Consensus 240 ~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~ 271 (391)
T 1l0q_A 240 IPVGPDPAGIAVTPDGKKVYVALSFXNTVSVI 271 (391)
T ss_dssp EECCSSEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EecCCCccEEEEccCCCEEEEEcCCCCEEEEE
Confidence 468899999877 565666655544
No 119
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=2.3e-30 Score=224.54 Aligned_cols=231 Identities=13% Similarity=0.138 Sum_probs=169.7
Q ss_pred CCcEEEEEEcC-CCCEEEEEcCCCeEEEEEccCceEEEEecCCCceeEEEEeec---CcEEEEEe-CCeEEEEeCC-CCE
Q psy9936 10 QFGIYRMNYTK-NGRHLLLGGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHL---ETMFAVAQ-KDWVYIYDNQ-GIE 83 (315)
Q Consensus 10 ~~~v~~~~~s~-~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~-~~~i~i~~~~-~~~ 83 (315)
...|.+++|+| ++.+|++++.||.|++||+.+++....+.+...+.++.|+|. +.+++++. ++.|++||+. +..
T Consensus 99 ~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 178 (408)
T 4a11_B 99 RYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSC 178 (408)
T ss_dssp SSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCC
T ss_pred CCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcce
Confidence 67899999999 778999999999999999999999999888899999999985 44777765 8999999995 444
Q ss_pred EEEee-cCCceEEEEEcCCCc-eEEEEcCCCeEEEEEccCCe-EEEEe---------------ccCCCCeEEEEEcCCCC
Q psy9936 84 LHCLK-VLNKVTRMEFLPYHF-LLATASEEGYLSWLDTSIGK-IVSDF---------------SAKKGKLSVMTQNPYNA 145 (315)
Q Consensus 84 ~~~~~-~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~-~~~~~---------------~~~~~~v~~~~~~p~~~ 145 (315)
+..+. |...|.+++|+|++. +|++++.||.|++||++++. .+..+ ..|...|.+++|+|+++
T Consensus 179 ~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 258 (408)
T 4a11_B 179 SHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGL 258 (408)
T ss_dssp CEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSS
T ss_pred eeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCC
Confidence 44444 668999999999998 58999999999999998764 33333 46888999999999999
Q ss_pred EEEEEcCCCeEEEEcCCCCc-----------------------------------------------ceeEeecccccEE
Q psy9936 146 CICLGHRNGTVTMWSPTVQK-----------------------------------------------PLASLLCHKAGIQ 178 (315)
Q Consensus 146 ~l~~~~~d~~i~i~d~~~~~-----------------------------------------------~~~~~~~~~~~i~ 178 (315)
+|++++.|+.|++||+++++ ++..+.+|...|+
T Consensus 259 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~ 338 (408)
T 4a11_B 259 HLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVD 338 (408)
T ss_dssp EEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEE
T ss_pred EEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEE
Confidence 99999999999999987643 3455667999999
Q ss_pred EEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCCCceeEEEccCC--eE-EEEcCCEEEecCC
Q psy9936 179 SVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRTPINNLAFSQRG--LL-ATSRGNIVEFLKP 243 (315)
Q Consensus 179 ~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g--~~-~~~~~~~i~~~~~ 243 (315)
+++|+|++++|++++.||.|++||+.+. +++......... ..+.|.. .+ ....++.+++|+.
T Consensus 339 ~~~~s~~~~~l~s~~~dg~i~iw~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~W~~ 403 (408)
T 4a11_B 339 CCVFQSNFQELYSGSRDCNILAWVPSLY-EPVPDDDETTTK--SQLNPAFEDAWSSSDEEGGTSAWSH 403 (408)
T ss_dssp EEEEETTTTEEEEEETTSCEEEEEECC-----------------------------------------
T ss_pred EEEEcCCCCEEEEECCCCeEEEEeCCCC-CccCCCCceEec--cccccccceeecccCccCceeecCC
Confidence 9999999999999999999999999998 666554433322 2223322 22 3345788888864
No 120
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.1e-30 Score=222.38 Aligned_cols=223 Identities=11% Similarity=0.019 Sum_probs=171.0
Q ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEcc---------CceEEEEec--CCCceeEEEEee--cCcEEEEEe-CCeEEE
Q psy9936 11 FGIYRMNYTKNGRHLLLGGKRGHVAAFDWV---------RKTLACEMN--VMEEVYDIKWLH--LETMFAVAQ-KDWVYI 76 (315)
Q Consensus 11 ~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~---------~~~~~~~~~--~~~~v~~~~~~~--~~~~l~~~~-~~~i~i 76 (315)
..|.++.|+|+ +++++.|+.|++|+.. +++.+..+. |.+.|.+++|+| ++.++++++ |+.|++
T Consensus 77 ~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~ 153 (343)
T 3lrv_A 77 PNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGF 153 (343)
T ss_dssp ECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEE
T ss_pred CCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEE
Confidence 45566777887 8999999999999765 444344433 567899999999 999999776 899999
Q ss_pred EeCCCCEE-EEe--ecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEE-EEecc-CCCCeEEEEEcCCCCEEEEEc
Q psy9936 77 YDNQGIEL-HCL--KVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIV-SDFSA-KKGKLSVMTQNPYNACICLGH 151 (315)
Q Consensus 77 ~~~~~~~~-~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~-~~~~~-~~~~v~~~~~~p~~~~l~~~~ 151 (315)
||+..... ... .+...+.+++|+|++.+|++|+.||.|++||+++++.+ ..+.. |.+.|++++|+|+|.+|++++
T Consensus 154 wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~ 233 (343)
T 3lrv_A 154 QSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC 233 (343)
T ss_dssp EESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE
T ss_pred EECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe
Confidence 99965443 333 23357999999999999999999999999999999877 77887 999999999999999999999
Q ss_pred CCCeEEEEcCCCCcceeEeec---ccccEE--EEEECCCCCEEEEeeC-CCcEEEEEccCCCCCeeEeccCCCceeEEEc
Q psy9936 152 RNGTVTMWSPTVQKPLASLLC---HKAGIQ--SVAVNHTGTYMATSAG-DSQLRIWDVRNLEGPLNTFRTRTPINNLAFS 225 (315)
Q Consensus 152 ~d~~i~i~d~~~~~~~~~~~~---~~~~i~--~~~~sp~g~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s 225 (315)
++.|++||+++++.+..+.. |...+. +++|+|+|++|++++. |+.+++|++... ...... .++..++|+
T Consensus 234 -~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~-~~~~~~---~~~~~~~~~ 308 (343)
T 3lrv_A 234 -DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKK-TKNWTK---DEESALCLQ 308 (343)
T ss_dssp -SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTT-TCSEEE---EEEEECCC-
T ss_pred -CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEccc-ccceEe---cCceeEecC
Confidence 45999999999877665543 334443 6999999999999998 999999999766 332222 456677777
Q ss_pred c---CC--eEEEEcCCEEEec
Q psy9936 226 Q---RG--LLATSRGNIVEFL 241 (315)
Q Consensus 226 ~---~g--~~~~~~~~~i~~~ 241 (315)
| ++ .++++.|+.+..+
T Consensus 309 ~~~~~~~~l~~~~~d~~~~~~ 329 (343)
T 3lrv_A 309 SDTADFTDMDVVCGDGGIAAI 329 (343)
T ss_dssp ---CCCCEEEEEEETTEEEEE
T ss_pred ccccccceeEEEecCCceEEE
Confidence 7 54 3445567777654
No 121
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.98 E-value=1.4e-30 Score=225.72 Aligned_cols=259 Identities=11% Similarity=0.100 Sum_probs=182.5
Q ss_pred EEEeeCCCcEEEEEEc---CCCCEEEEEcCCCeEEEEEccCc----------eEEEEecCCCceeEEEE-----------
Q psy9936 4 QFDLDLQFGIYRMNYT---KNGRHLLLGGKRGHVAAFDWVRK----------TLACEMNVMEEVYDIKW----------- 59 (315)
Q Consensus 4 ~~~~~~~~~v~~~~~s---~~~~~l~~~~~dg~i~v~~~~~~----------~~~~~~~~~~~v~~~~~----------- 59 (315)
.+.+.++..++++.|. |++..+++++.++.|.+|+.... ..+..+.+..++..+.|
T Consensus 9 ~~~lpl~~~p~~~~w~~~~~~~~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (393)
T 4gq1_A 9 QYQLPLNVRPYTTTWCSQSPSCSNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSCSYSENLH 88 (393)
T ss_dssp EEECCTTCCEEEEEECTTSGGGTTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTCEEECC--
T ss_pred ceEecCCCCCeEEEEeCCCCCCCCEEEEECCCCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCcccccccc
Confidence 3556667888899984 44444444445778999975321 11222233344444444
Q ss_pred ---------eecCcEEEEEe-CCeEEEEeCCCCEEEE---e----ecCCceEEEEEcC--------CCceEEEEcCCCeE
Q psy9936 60 ---------LHLETMFAVAQ-KDWVYIYDNQGIELHC---L----KVLNKVTRMEFLP--------YHFLLATASEEGYL 114 (315)
Q Consensus 60 ---------~~~~~~l~~~~-~~~i~i~~~~~~~~~~---~----~~~~~v~~~~~~~--------~~~~l~~~~~d~~i 114 (315)
.+++.+|++++ |++|++||........ + .|...|++++|+| ++++|++++.|++|
T Consensus 89 ~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv 168 (393)
T 4gq1_A 89 DGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTL 168 (393)
T ss_dssp --------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEE
T ss_pred CCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeE
Confidence 34556788776 8999999996544322 1 3668999999998 78999999999999
Q ss_pred EEEEccCCeEEEEeccCCCCeEEEEEcCCCC-EEEEEcCCCeEEEEcCCCCcceeE------------------------
Q psy9936 115 SWLDTSIGKIVSDFSAKKGKLSVMTQNPYNA-CICLGHRNGTVTMWSPTVQKPLAS------------------------ 169 (315)
Q Consensus 115 ~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~-~l~~~~~d~~i~i~d~~~~~~~~~------------------------ 169 (315)
++||+.++..+..+..|...+.+++|+|++. +|++++.|++|++||+++++....
T Consensus 169 ~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 248 (393)
T 4gq1_A 169 IIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTC 248 (393)
T ss_dssp EEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC---
T ss_pred EEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeee
Confidence 9999998888888888999999999999875 899999999999999987754322
Q ss_pred -eecccccEEEEEEC-CCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-------------------CceeEEEcc--
Q psy9936 170 -LLCHKAGIQSVAVN-HTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-------------------PINNLAFSQ-- 226 (315)
Q Consensus 170 -~~~~~~~i~~~~~s-p~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-------------------~v~~~~~s~-- 226 (315)
..+|...+.++.|+ |+|..|++++.|+++++||+..+ .....+..+. ......|+|
T Consensus 249 ~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (393)
T 4gq1_A 249 HSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFAN-NDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRY 327 (393)
T ss_dssp ---CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC--------------------CCSCSEEEECSSCCSSCCEECSSC
T ss_pred ecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccC-CCCceEeeecCccccEEEccccccccccCcceeEEEccCC
Confidence 13466788889886 89999999999999999999876 4433332221 123344544
Q ss_pred CCeEEEE--cCCEEEecCC----------------CceeecccccccccCCcchh
Q psy9936 227 RGLLATS--RGNIVEFLKP----------------PEINFEPRRKANKAGGSVQR 263 (315)
Q Consensus 227 ~g~~~~~--~~~~i~~~~~----------------~~~~~~~~~~~~~~~~~~~~ 263 (315)
++.++++ .|+.|++|+. .+++|+|+|++||+++.++.
T Consensus 328 ~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv 382 (393)
T 4gq1_A 328 MDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSV 382 (393)
T ss_dssp TTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEE
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 3455554 3899999976 67899999999999987764
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=4.1e-29 Score=218.94 Aligned_cols=231 Identities=9% Similarity=0.047 Sum_probs=195.8
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe--CCeEEEEeCCC-CEEE
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ--KDWVYIYDNQG-IELH 85 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~--~~~i~i~~~~~-~~~~ 85 (315)
...|.+++|+|++.++++++.++.|++||+.+++....+. +...+.+++|+|++..++++. ++.|++||+.. ..+.
T Consensus 169 ~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~ 248 (433)
T 3bws_A 169 LGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIR 248 (433)
T ss_dssp CCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEE
Confidence 4578999999999999999999999999999998888776 777899999999998775443 79999999954 4455
Q ss_pred EeecCCceEEEEEcCCCceEEEEc--------CCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCE-EEEEcCCCeE
Q psy9936 86 CLKVLNKVTRMEFLPYHFLLATAS--------EEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNAC-ICLGHRNGTV 156 (315)
Q Consensus 86 ~~~~~~~v~~~~~~~~~~~l~~~~--------~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~-l~~~~~d~~i 156 (315)
.+.....+.+++|+|+++.+++++ .|+.|++||+.+++.+..+. |...+..++|+|+++. +++++.++.|
T Consensus 249 ~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~v 327 (433)
T 3bws_A 249 KTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-PPGNKRHIVSGNTENKIYVSDMCCSKI 327 (433)
T ss_dssp ECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-EEECEEEEEECSSTTEEEEEETTTTEE
T ss_pred EecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc-CCCCcceEEECCCCCEEEEEecCCCEE
Confidence 566667799999999999998887 58899999999988776653 5557899999999975 5666899999
Q ss_pred EEEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeC---------------CCcEEEEEccCCCCCeeEeccCCCcee
Q psy9936 157 TMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAG---------------DSQLRIWDVRNLEGPLNTFRTRTPINN 221 (315)
Q Consensus 157 ~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~---------------d~~i~iwd~~~~~~~~~~~~~~~~v~~ 221 (315)
.+||+++++.+..+. +...+.+++|+|+|++|++++. ||.|++||+.++ +.+..+..+..+.+
T Consensus 328 ~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~-~~~~~~~~~~~~~~ 405 (433)
T 3bws_A 328 EVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTD-TVKEFWEAGNQPTG 405 (433)
T ss_dssp EEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTT-EEEEEEECSSSEEE
T ss_pred EEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCC-cEEEEecCCCCCce
Confidence 999999988887776 7788999999999999888876 579999999998 88888887778999
Q ss_pred EEEccCCeE-E-EEc-CCEEEecCC
Q psy9936 222 LAFSQRGLL-A-TSR-GNIVEFLKP 243 (315)
Q Consensus 222 ~~~s~~g~~-~-~~~-~~~i~~~~~ 243 (315)
++|+|+|.+ + ++. ++.|++|++
T Consensus 406 ~~~s~dg~~l~~~~~~d~~i~v~~~ 430 (433)
T 3bws_A 406 LDVSPDNRYLVISDFLDHQIRVYRR 430 (433)
T ss_dssp EEECTTSCEEEEEETTTTEEEEEEE
T ss_pred EEEcCCCCEEEEEECCCCeEEEEEe
Confidence 999999953 3 343 899999974
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=1e-29 Score=210.31 Aligned_cols=191 Identities=13% Similarity=0.100 Sum_probs=146.3
Q ss_pred CcEEEEEEcCC----CCEEEEEcC--------------------CCeEEEEEc-cCceEEEEec-CCCceeEEEEee---
Q psy9936 11 FGIYRMNYTKN----GRHLLLGGK--------------------RGHVAAFDW-VRKTLACEMN-VMEEVYDIKWLH--- 61 (315)
Q Consensus 11 ~~v~~~~~s~~----~~~l~~~~~--------------------dg~i~v~~~-~~~~~~~~~~-~~~~v~~~~~~~--- 61 (315)
..|.+++|+|| ++++++++. |+.|++|++ .+++.+..+. |...+..++|+|
T Consensus 112 ~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g 191 (356)
T 2w18_A 112 REIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQG 191 (356)
T ss_dssp EEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEET
T ss_pred cceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCC
Confidence 36788888888 777776553 777888887 3466655544 677778888888
Q ss_pred cCcEEEEEe-CCeEEEEeCC-CCEEEEee-cC---CceEEEEEcCCCceE------------EEEcCCCeEEEEEccCCe
Q psy9936 62 LETMFAVAQ-KDWVYIYDNQ-GIELHCLK-VL---NKVTRMEFLPYHFLL------------ATASEEGYLSWLDTSIGK 123 (315)
Q Consensus 62 ~~~~l~~~~-~~~i~i~~~~-~~~~~~~~-~~---~~v~~~~~~~~~~~l------------~~~~~d~~i~~~d~~~~~ 123 (315)
++.+|++++ |++|+|||+. ++.+..+. +. ..+.+++|+|+|.++ ++|+.|++|++||..+++
T Consensus 192 ~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk 271 (356)
T 2w18_A 192 MQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTL 271 (356)
T ss_dssp STTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTE
T ss_pred CCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCE
Confidence 668888876 8999999995 66677775 22 467788999999876 567889999999999998
Q ss_pred EEEEe-----ccCCCCeEEEEEcCCCCEEEEEcCCCeEEEEcCCCCcceeEeecccccEE-EEEECCCCCEEEEeeCCCc
Q psy9936 124 IVSDF-----SAKKGKLSVMTQNPYNACICLGHRNGTVTMWSPTVQKPLASLLCHKAGIQ-SVAVNHTGTYMATSAGDSQ 197 (315)
Q Consensus 124 ~~~~~-----~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~-~~~~sp~g~~l~~~~~d~~ 197 (315)
.+..+ .+|...+.+..+ ++.++++++.|++|+|||+.+++++.++.+|...+. +++|+|||++|++|+.|++
T Consensus 272 ~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~T 349 (356)
T 2w18_A 272 SVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGN 349 (356)
T ss_dssp EEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSC
T ss_pred EEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCc
Confidence 87665 356655544444 378999999999999999999999999998887655 5899999999999999999
Q ss_pred EEEEEc
Q psy9936 198 LRIWDV 203 (315)
Q Consensus 198 i~iwd~ 203 (315)
|+|||+
T Consensus 350 IklWd~ 355 (356)
T 2w18_A 350 IFVYHY 355 (356)
T ss_dssp EEEEEE
T ss_pred EEEecC
Confidence 999996
No 124
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=2.2e-29 Score=215.30 Aligned_cols=229 Identities=13% Similarity=0.113 Sum_probs=182.0
Q ss_pred EEccCceEEEEec-CCCceeEEEEeec---CcEEEEEe-CCeEEEEeCC--CCEE-EE-eecCCceEEEEEcCCCceEEE
Q psy9936 37 FDWVRKTLACEMN-VMEEVYDIKWLHL---ETMFAVAQ-KDWVYIYDNQ--GIEL-HC-LKVLNKVTRMEFLPYHFLLAT 107 (315)
Q Consensus 37 ~~~~~~~~~~~~~-~~~~v~~~~~~~~---~~~l~~~~-~~~i~i~~~~--~~~~-~~-~~~~~~v~~~~~~~~~~~l~~ 107 (315)
++....+.+..+. |.+.|++++|+|+ |.+|++++ |+.|++||+. +..+ .. ..|...|.+++|+|++.+|++
T Consensus 24 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 103 (368)
T 3mmy_A 24 DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFT 103 (368)
T ss_dssp CSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEE
T ss_pred CCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEE
Confidence 3444555566665 8899999999998 58888887 8999999995 3443 23 346789999999999999999
Q ss_pred EcCCCeEEEEEccCCeEEEEeccCCCCeEEEEE--cCCCCEEEEEcCCCeEEEEcCCCCcceeEeeccc-----------
Q psy9936 108 ASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQ--NPYNACICLGHRNGTVTMWSPTVQKPLASLLCHK----------- 174 (315)
Q Consensus 108 ~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~--~p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~----------- 174 (315)
++.||.|++||+.+++.+. +..|...|.+++| +|++++|++++.|+.|++||+++++++..+..+.
T Consensus 104 ~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (368)
T 3mmy_A 104 ASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPM 182 (368)
T ss_dssp EETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTE
T ss_pred EcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCe
Confidence 9999999999999888766 4569999999999 9999999999999999999999988777666432
Q ss_pred ------------------------------ccEEEEEECCCCCE----EEEeeCCCcEEEEEccCCC--CCeeEeccCC-
Q psy9936 175 ------------------------------AGIQSVAVNHTGTY----MATSAGDSQLRIWDVRNLE--GPLNTFRTRT- 217 (315)
Q Consensus 175 ------------------------------~~i~~~~~sp~g~~----l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~- 217 (315)
..+.++++.+++.. +++++.|+.|++||++... ..+..+..|.
T Consensus 183 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~ 262 (368)
T 3mmy_A 183 AVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRS 262 (368)
T ss_dssp EEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEE
T ss_pred eEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeec
Confidence 22344444444433 9999999999999998762 2344555554
Q ss_pred ------------CceeEEEccCCe--EEEEcCCEEEecCC----------------CceeecccccccccCCcchhhhh
Q psy9936 218 ------------PINNLAFSQRGL--LATSRGNIVEFLKP----------------PEINFEPRRKANKAGGSVQRAKV 266 (315)
Q Consensus 218 ------------~v~~~~~s~~g~--~~~~~~~~i~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ 266 (315)
+|++++|+|++. +.++.|+.|++|+. .+++|+|+++++++++.+...+.
T Consensus 263 ~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~ 341 (368)
T 3mmy_A 263 NGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKG 341 (368)
T ss_dssp C----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTC
T ss_pred ccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEeccccccc
Confidence 599999999994 34456999999987 67999999999999988764443
No 125
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7.3e-30 Score=238.52 Aligned_cols=219 Identities=13% Similarity=0.147 Sum_probs=184.6
Q ss_pred CCCceeEEEEeecCcEEEEEe-CCeEEEEeCCCC---EEEEe-ecCCceEEEEEcCC--CceEEEEcCCCeEEEEEccCC
Q psy9936 50 VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGI---ELHCL-KVLNKVTRMEFLPY--HFLLATASEEGYLSWLDTSIG 122 (315)
Q Consensus 50 ~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~---~~~~~-~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~ 122 (315)
|.++|++++|+|++++|++++ ||.|++||+.+. ....+ .|..+|.+++|+|+ +.+|++++.||.|++||+.++
T Consensus 8 H~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~ 87 (753)
T 3jro_A 8 HNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG 87 (753)
T ss_dssp CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETT
T ss_pred CcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCC
Confidence 889999999999999888886 899999998533 22333 36689999999988 899999999999999999988
Q ss_pred e--EEEEeccCCCCeEEEEEcCC--CCEEEEEcCCCeEEEEcCCCCc--ceeEeecccccEEEEEECC------------
Q psy9936 123 K--IVSDFSAKKGKLSVMTQNPY--NACICLGHRNGTVTMWSPTVQK--PLASLLCHKAGIQSVAVNH------------ 184 (315)
Q Consensus 123 ~--~~~~~~~~~~~v~~~~~~p~--~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~i~~~~~sp------------ 184 (315)
+ .+..+..|...|.+++|+|+ ++++++|+.||.|++||++++. ....+.+|...|.+++|+|
T Consensus 88 ~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~ 167 (753)
T 3jro_A 88 RWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGT 167 (753)
T ss_dssp EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------C
T ss_pred cccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccC
Confidence 6 67778889999999999999 9999999999999999999873 4455678999999999999
Q ss_pred -CCCEEEEeeCCCcEEEEEccCCC---CCeeEeccCC-CceeEEEccC---CeE--EEEcCCEEEecCC-----------
Q psy9936 185 -TGTYMATSAGDSQLRIWDVRNLE---GPLNTFRTRT-PINNLAFSQR---GLL--ATSRGNIVEFLKP----------- 243 (315)
Q Consensus 185 -~g~~l~~~~~d~~i~iwd~~~~~---~~~~~~~~~~-~v~~~~~s~~---g~~--~~~~~~~i~~~~~----------- 243 (315)
++.+|++|+.||.|++||++++. .+...+..|. +|++++|+|+ +.+ .++.|+.|++|++
T Consensus 168 ~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~ 247 (753)
T 3jro_A 168 KESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTL 247 (753)
T ss_dssp GGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCB
T ss_pred CCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEE
Confidence 58999999999999999999862 2234445555 6999999999 743 4445899998865
Q ss_pred ----------CceeecccccccccCCcchhhhhhh
Q psy9936 244 ----------PEINFEPRRKANKAGGSVQRAKVKK 268 (315)
Q Consensus 244 ----------~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (315)
.+++|+|++.++++++.++.++.+.
T Consensus 248 ~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd 282 (753)
T 3jro_A 248 LKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWK 282 (753)
T ss_dssp SSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCB
T ss_pred eccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEe
Confidence 5789999999999998888665554
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=2.1e-28 Score=202.57 Aligned_cols=225 Identities=8% Similarity=0.038 Sum_probs=161.6
Q ss_pred EEEEEcCCCC---EEEEEcCCCeEEEEEccCc---eEEEEec-CCC-------------------------ceeEEEEee
Q psy9936 14 YRMNYTKNGR---HLLLGGKRGHVAAFDWVRK---TLACEMN-VME-------------------------EVYDIKWLH 61 (315)
Q Consensus 14 ~~~~~s~~~~---~l~~~~~dg~i~v~~~~~~---~~~~~~~-~~~-------------------------~v~~~~~~~ 61 (315)
.++-|-.-|- .+++++. ..|++|+..++ +.+.++. |.. .|..++|+|
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~sp 121 (356)
T 2w18_A 43 SAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSS 121 (356)
T ss_dssp EEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC--
T ss_pred eeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECC
Confidence 4444544332 5666664 57999999887 5555544 221 466778888
Q ss_pred c----CcEEEEEe---------------------CCeEEEEeC-C-CCEEEE-eecCCceEEEEEcC---CCceEEEEcC
Q psy9936 62 L----ETMFAVAQ---------------------KDWVYIYDN-Q-GIELHC-LKVLNKVTRMEFLP---YHFLLATASE 110 (315)
Q Consensus 62 ~----~~~l~~~~---------------------~~~i~i~~~-~-~~~~~~-~~~~~~v~~~~~~~---~~~~l~~~~~ 110 (315)
+ +++++.++ ++.|++|++ . ++.+.. ..|...+..++|+| ++..|++++.
T Consensus 122 d~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~ 201 (356)
T 2w18_A 122 DDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTI 201 (356)
T ss_dssp ----CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEET
T ss_pred CccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecC
Confidence 8 66666532 667788877 2 343333 34556777888888 6789999999
Q ss_pred CCeEEEEEccCCeEEEEeccCC---CCeEEEEEcCCCCEE------------EEEcCCCeEEEEcCCCCcceeEe-----
Q psy9936 111 EGYLSWLDTSIGKIVSDFSAKK---GKLSVMTQNPYNACI------------CLGHRNGTVTMWSPTVQKPLASL----- 170 (315)
Q Consensus 111 d~~i~~~d~~~~~~~~~~~~~~---~~v~~~~~~p~~~~l------------~~~~~d~~i~i~d~~~~~~~~~~----- 170 (315)
|++|++||+.+++.++++.+|. ..+.+++|+|+|.++ ++|+.|++|++||..+++.+..+
T Consensus 202 D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p 281 (356)
T 2w18_A 202 MNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLP 281 (356)
T ss_dssp TSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCC
T ss_pred CCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeecc
Confidence 9999999999999999998654 357788999999876 56788999999999999877655
Q ss_pred ecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-Cc-eeEEEccCCeEEE--EcCCEEEecC
Q psy9936 171 LCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-PI-NNLAFSQRGLLAT--SRGNIVEFLK 242 (315)
Q Consensus 171 ~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v-~~~~~s~~g~~~~--~~~~~i~~~~ 242 (315)
.+|...+.+..++ +.++|+++.|++|+|||+.++ +++.++..|. .+ ..++|+|||.+++ +.|++|++|+
T Consensus 282 ~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tG-k~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd 354 (356)
T 2w18_A 282 PGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLG-QCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYH 354 (356)
T ss_dssp TTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTC-SEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred CCCcceeEccccC--CCEEEEEcCCCcEEEEECCCC-cEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEec
Confidence 3566555444443 889999999999999999999 9999998775 34 4589999996444 4599999997
No 127
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.96 E-value=2.4e-26 Score=195.73 Aligned_cols=251 Identities=11% Similarity=0.055 Sum_probs=201.1
Q ss_pred CCCcEEEEEEcCCCCEEEEEcC-------CCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEe--CCeEEEEeC
Q psy9936 9 LQFGIYRMNYTKNGRHLLLGGK-------RGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQ--KDWVYIYDN 79 (315)
Q Consensus 9 ~~~~v~~~~~s~~~~~l~~~~~-------dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~~~ 79 (315)
....+..++|+|+|+++++++. ++.|.+||..+++....+.....+..++|+|+++.++++. ++.|.+||.
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 3567889999999998887764 5689999999999888887666788999999998666554 589999999
Q ss_pred CC-CEEEEeecCC----------ceEEEEEcCCCceEEEEc--CCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCE
Q psy9936 80 QG-IELHCLKVLN----------KVTRMEFLPYHFLLATAS--EEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNAC 146 (315)
Q Consensus 80 ~~-~~~~~~~~~~----------~v~~~~~~~~~~~l~~~~--~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 146 (315)
.+ ..+..+.... .+.+++|+|+++.+++++ .++.|.+||+.+++.+..+..+...+..++|+|+|++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 198 (353)
T 3vgz_A 119 KTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKR 198 (353)
T ss_dssp TTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTE
T ss_pred CCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCE
Confidence 54 4444444321 268899999998777765 4788999999999988888755566888999999999
Q ss_pred EEEEcCCCeEEEEcCCCCcceeEeec----ccccEEEEEECCCCCEEEEeeC-CCcEEEEEccCCCCCeeEeccCCCcee
Q psy9936 147 ICLGHRNGTVTMWSPTVQKPLASLLC----HKAGIQSVAVNHTGTYMATSAG-DSQLRIWDVRNLEGPLNTFRTRTPINN 221 (315)
Q Consensus 147 l~~~~~d~~i~i~d~~~~~~~~~~~~----~~~~i~~~~~sp~g~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~v~~ 221 (315)
+++++.++.|.+||+.+++.+..+.. +...+.+++|+|+|+++++++. ++.|.+||+.++ +.+..+..+.+ ..
T Consensus 199 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~-~~~~~~~~~~~-~~ 276 (353)
T 3vgz_A 199 LYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNG-NILAKVAAPES-LA 276 (353)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTC-CEEEEEECSSC-CC
T ss_pred EEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCC-cEEEEEEcCCC-ce
Confidence 99999999999999999988777663 4556888999999997777665 489999999988 77777776554 67
Q ss_pred EEEccCCe--EEEE-cCCEEEecCC---------------CceeecccccccccCCcc
Q psy9936 222 LAFSQRGL--LATS-RGNIVEFLKP---------------PEINFEPRRKANKAGGSV 261 (315)
Q Consensus 222 ~~~s~~g~--~~~~-~~~~i~~~~~---------------~~~~~~~~~~~~~~~~~~ 261 (315)
++|+|+|. +++. .++.|.+|++ ..++|+|+++.+..+...
T Consensus 277 ~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 277 VLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECTTSCEEEEEEEC
T ss_pred EEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcCCCCEEEEEEcc
Confidence 99999994 4444 4789998876 567899999866555443
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=4.6e-26 Score=198.66 Aligned_cols=218 Identities=12% Similarity=0.104 Sum_probs=168.6
Q ss_pred CCEEEEEcCC------CeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEe-C---CeEEEEeCCCCEEEE-eecC
Q psy9936 22 GRHLLLGGKR------GHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQ-K---DWVYIYDNQGIELHC-LKVL 90 (315)
Q Consensus 22 ~~~l~~~~~d------g~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~---~~i~i~~~~~~~~~~-~~~~ 90 (315)
+..+++++.+ +.|++||++++.......|...+.+++|+|+|+.|+.++ + ..|++||+.+..... ..+.
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~ 222 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFP 222 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCS
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCC
Confidence 5566665543 799999998665555555888999999999999998876 4 389999996544444 4456
Q ss_pred CceEEEEEcCCCceEE-EEcCCCe--EEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcC-CC--eEEEEcCCCC
Q psy9936 91 NKVTRMEFLPYHFLLA-TASEEGY--LSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHR-NG--TVTMWSPTVQ 164 (315)
Q Consensus 91 ~~v~~~~~~~~~~~l~-~~~~d~~--i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~-d~--~i~i~d~~~~ 164 (315)
..+.+++|+|+|+.|+ +++.++. |++||+.+++. ..+..|...+.+++|+|||++|++++. ++ .|.+||+.++
T Consensus 223 ~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~ 301 (415)
T 2hqs_A 223 RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGG 301 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS
T ss_pred CcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCC
Confidence 7899999999999877 5655554 99999998775 567778888999999999998888775 44 7888899887
Q ss_pred cceeEeecccccEEEEEECCCCCEEEEeeCC---CcEEEEEccCCCCCeeEeccCCCceeEEEccCCeE--EEEcCC---
Q psy9936 165 KPLASLLCHKAGIQSVAVNHTGTYMATSAGD---SQLRIWDVRNLEGPLNTFRTRTPINNLAFSQRGLL--ATSRGN--- 236 (315)
Q Consensus 165 ~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~--~~~~~~--- 236 (315)
+. ..+..+...+.+++|+|+|++|++++.+ ..|++||+.++ .. ..+..+..+.+++|+|||.+ .++.++
T Consensus 302 ~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~-~~-~~l~~~~~~~~~~~spdg~~l~~~s~~~~~~ 378 (415)
T 2hqs_A 302 AP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATG-GV-QVLSSTFLDETPSLAPNGTMVIYSSSQGMGS 378 (415)
T ss_dssp CC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTC-CE-EECCCSSSCEEEEECTTSSEEEEEEEETTEE
T ss_pred CE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCC-CE-EEecCCCCcCCeEEcCCCCEEEEEEcCCCcc
Confidence 64 4455577789999999999999988764 58999999987 54 44544557899999999953 333344
Q ss_pred EEEecCC
Q psy9936 237 IVEFLKP 243 (315)
Q Consensus 237 ~i~~~~~ 243 (315)
.|..|++
T Consensus 379 ~l~~~d~ 385 (415)
T 2hqs_A 379 VLNLVST 385 (415)
T ss_dssp EEEEEET
T ss_pred EEEEEEC
Confidence 6777765
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=3.5e-26 Score=199.40 Aligned_cols=214 Identities=10% Similarity=0.009 Sum_probs=173.9
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCC---eEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEE-e-C--CeEEEEeCCCC
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRG---HVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVA-Q-K--DWVYIYDNQGI 82 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg---~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~-~--~~i~i~~~~~~ 82 (315)
...+.+++|||||++|++++.++ .|++||+.+++......+...+.+++|+|||+.|+.+ + + ..|++||+.+.
T Consensus 178 ~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~ 257 (415)
T 2hqs_A 178 PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASG 257 (415)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTC
T ss_pred CCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCC
Confidence 67899999999999999998875 9999999999887666688889999999999988844 3 3 35999999665
Q ss_pred EEEEe-ecCCceEEEEEcCCCceEEEEcC-CC--eEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCC---Ce
Q psy9936 83 ELHCL-KVLNKVTRMEFLPYHFLLATASE-EG--YLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRN---GT 155 (315)
Q Consensus 83 ~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d---~~ 155 (315)
....+ .+...+.+++|+|+|+.|++++. ++ .|.+||+.+++. ..+..+...+..++|+|+|++|++++.+ ..
T Consensus 258 ~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~ 336 (415)
T 2hqs_A 258 QIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQH 336 (415)
T ss_dssp CEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEE
T ss_pred CEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceE
Confidence 55554 45578999999999998888876 44 688889887764 4455567788999999999999888764 58
Q ss_pred EEEEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCC---cEEEEEccCCCCCeeEeccCC-CceeEEEccCC
Q psy9936 156 VTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDS---QLRIWDVRNLEGPLNTFRTRT-PINNLAFSQRG 228 (315)
Q Consensus 156 i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~---~i~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~g 228 (315)
|.+||+.+++. ..+..+. .+.+++|+|+|++|++++.++ .|++||+.+ .....+..+. .|.+++|+|.-
T Consensus 337 i~~~d~~~~~~-~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g--~~~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 337 IAKQDLATGGV-QVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDG--RFKARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp EEEEETTTCCE-EECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTS--CCEEECCCSSSEEEEEEECCCC
T ss_pred EEEEECCCCCE-EEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCC--CcEEEeeCCCCCCcCCcccccc
Confidence 99999998865 4455554 889999999999999988777 799999975 5666777664 69999999964
No 130
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.95 E-value=4.7e-26 Score=188.59 Aligned_cols=219 Identities=12% Similarity=0.104 Sum_probs=173.7
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccC-ceEEEEec-C-CCceeEEEEeecCcEEEEEe-----CCeEEEEeCCC
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVR-KTLACEMN-V-MEEVYDIKWLHLETMFAVAQ-----KDWVYIYDNQG 81 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~-~~~~~~~~-~-~~~v~~~~~~~~~~~l~~~~-----~~~i~i~~~~~ 81 (315)
...|.+++|+|+|++|++++ ++.|++||+.+ ++...... + ...+.+++|+|++++|+++. ...|+.++..+
T Consensus 41 ~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~ 119 (297)
T 2ojh_A 41 PELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTG 119 (297)
T ss_dssp SSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTC
T ss_pred CcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCC
Confidence 67899999999999999886 78999999998 77766654 3 36789999999999998887 24666667666
Q ss_pred CEEEEeecCCceEEEEEcCCCceEE-EEcCCCeEEEEEccC-CeEEEEeccCCCCeEEEEEcCCCCEEEEEc-CCCeEEE
Q psy9936 82 IELHCLKVLNKVTRMEFLPYHFLLA-TASEEGYLSWLDTSI-GKIVSDFSAKKGKLSVMTQNPYNACICLGH-RNGTVTM 158 (315)
Q Consensus 82 ~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~~d~~~-~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~-~d~~i~i 158 (315)
.....+.....+..++|+|+++.|+ +++.++.+.+|++.. +.....+..+...+.+++|+|+|++|++++ .++.+.+
T Consensus 120 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i 199 (297)
T 2ojh_A 120 GTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQI 199 (297)
T ss_dssp CCCEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEE
T ss_pred CceEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccE
Confidence 6666666666799999999999777 677889999998642 234456666778899999999999877665 5889999
Q ss_pred EcCC-CCcceeEeecccccEEEEEECCCCCEEEEeeCC-----------CcEEEEEccCCCCCeeEe--ccC-CCceeEE
Q psy9936 159 WSPT-VQKPLASLLCHKAGIQSVAVNHTGTYMATSAGD-----------SQLRIWDVRNLEGPLNTF--RTR-TPINNLA 223 (315)
Q Consensus 159 ~d~~-~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d-----------~~i~iwd~~~~~~~~~~~--~~~-~~v~~~~ 223 (315)
|+++ .+..+..+..|...+.+++|+|+|++|++++.+ +.|.+||+.++ ...... ..+ ..+..++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~~~~~~~~~~~~~~~~~~ 278 (297)
T 2ojh_A 200 WRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGG-NVETLFDLFGGQGTMNSPN 278 (297)
T ss_dssp EEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSC-SCEEEEEEEESTTTSCSCC
T ss_pred EEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCC-CceeeeccCCCCcccccce
Confidence 9876 456677777788889999999999999988765 56999999887 553333 233 3689999
Q ss_pred EccCCeE
Q psy9936 224 FSQRGLL 230 (315)
Q Consensus 224 ~s~~g~~ 230 (315)
|+|+|..
T Consensus 279 ~spdg~~ 285 (297)
T 2ojh_A 279 WSPDGDE 285 (297)
T ss_dssp BCTTSSE
T ss_pred ECCCCCE
Confidence 9999953
No 131
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.95 E-value=1.3e-26 Score=216.43 Aligned_cols=246 Identities=11% Similarity=0.057 Sum_probs=188.7
Q ss_pred CCcEEEEEEcCCCCEEEEEcC-CC-----eEEEEEccCceEEEEecC-C------------------------CceeEEE
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGK-RG-----HVAAFDWVRKTLACEMNV-M------------------------EEVYDIK 58 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~-dg-----~i~v~~~~~~~~~~~~~~-~------------------------~~v~~~~ 58 (315)
...+.+++|||||++|++++. ++ .|++||+.+++....+.. . ..+.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 456899999999999999988 87 899999999987766652 2 2378999
Q ss_pred EeecCcEEEEEeCCeEEEEeCCCC---EEEEee-cCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCC
Q psy9936 59 WLHLETMFAVAQKDWVYIYDNQGI---ELHCLK-VLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGK 134 (315)
Q Consensus 59 ~~~~~~~l~~~~~~~i~i~~~~~~---~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~ 134 (315)
|+|||++|+++.++.|++||+.+. ....+. +...+.+++|+|||++|++++. +.|++||+.+++.......+...
T Consensus 116 ~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~~~~~ 194 (741)
T 2ecf_A 116 WSPDAQRLLFPLGGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTADGSTT 194 (741)
T ss_dssp ECTTSSEEEEEETTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCCCCSS
T ss_pred ECCCCCEEEEEeCCcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccCCccc
Confidence 999999999999999999999765 444443 4478999999999999998874 58999999988766544433332
Q ss_pred ----------------eEEEEEcCCCCEEEEEcCCC---------------------------------eEEEEcCCC-C
Q psy9936 135 ----------------LSVMTQNPYNACICLGHRNG---------------------------------TVTMWSPTV-Q 164 (315)
Q Consensus 135 ----------------v~~~~~~p~~~~l~~~~~d~---------------------------------~i~i~d~~~-~ 164 (315)
+..++|+|||++|++++.|+ .|.+||+.+ +
T Consensus 195 ~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~ 274 (741)
T 2ecf_A 195 IGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQA 274 (741)
T ss_dssp EEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTC
T ss_pred eeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCC
Confidence 36799999999999887665 899999998 7
Q ss_pred cceeEee--cccccEEEEEECCCCCEEEEeeC-----CCcEEEEEccCCCCCeeEeccCC-----CceeEEEccCCeEEE
Q psy9936 165 KPLASLL--CHKAGIQSVAVNHTGTYMATSAG-----DSQLRIWDVRNLEGPLNTFRTRT-----PINNLAFSQRGLLAT 232 (315)
Q Consensus 165 ~~~~~~~--~~~~~i~~~~~sp~g~~l~~~~~-----d~~i~iwd~~~~~~~~~~~~~~~-----~v~~~~~s~~g~~~~ 232 (315)
+...... .|...+..++| |||++|++++. +..|++||+.++ .+...+..+. .+.+++|+|||.+++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~ 352 (741)
T 2ecf_A 275 QTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASN-QQRVLAHETSPTWVPLHNSLRFLDDGSILW 352 (741)
T ss_dssp CCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTC-CEEEEEEEECSSCCCCCSCCEECTTSCEEE
T ss_pred ceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCC-ceEEEEEcCCCCcCCcCCceEECCCCeEEE
Confidence 7554332 37788999999 99999987754 567999999988 6666555443 356899999996443
Q ss_pred E--cCCEEEec--CC--------------Cce-eecccccccccC
Q psy9936 233 S--RGNIVEFL--KP--------------PEI-NFEPRRKANKAG 258 (315)
Q Consensus 233 ~--~~~~i~~~--~~--------------~~~-~~~~~~~~~~~~ 258 (315)
+ .++.+++| +. ..+ .|+|+++.++..
T Consensus 353 ~~~~~g~~~l~~~~~~~~~~~l~~~~~~v~~~~~~s~dg~~l~~~ 397 (741)
T 2ecf_A 353 SSERTGFQHLYRIDSKGKAAALTHGNWSVDELLAVDEKAGLAYFR 397 (741)
T ss_dssp EECTTSSCEEEEECSSSCEEESCCSSSCEEEEEEEETTTTEEEEE
T ss_pred EecCCCccEEEEEcCCCCeeeeeecceEEEeEeEEeCCCCEEEEE
Confidence 3 35544443 32 133 599999876543
No 132
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=9.6e-25 Score=196.16 Aligned_cols=249 Identities=11% Similarity=0.077 Sum_probs=194.5
Q ss_pred eeCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEc--cCceEEEEecCCCceeEEEEee----cCcEEEEEe--CCeEEEEe
Q psy9936 7 LDLQFGIYRMNYTKNGRHLLLGGKRGHVAAFDW--VRKTLACEMNVMEEVYDIKWLH----LETMFAVAQ--KDWVYIYD 78 (315)
Q Consensus 7 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~--~~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~--~~~i~i~~ 78 (315)
+.....+.+++|+|||++|++++.++.|.+||+ .+++.+..+.+...+..++|+| +|+++++++ +++|.+||
T Consensus 175 i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D 254 (543)
T 1nir_A 175 IDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMD 254 (543)
T ss_dssp EECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEE
T ss_pred EecCcccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEe
Confidence 343334889999999999999999999999999 8898888888777889999999 999988876 79999999
Q ss_pred CC-CCEEEEeec-----------C-CceEEEEEcCCCc-eEEEEcCCCeEEEEEccCCeEEE--EeccCCCCeEEEEEcC
Q psy9936 79 NQ-GIELHCLKV-----------L-NKVTRMEFLPYHF-LLATASEEGYLSWLDTSIGKIVS--DFSAKKGKLSVMTQNP 142 (315)
Q Consensus 79 ~~-~~~~~~~~~-----------~-~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~--~~~~~~~~v~~~~~~p 142 (315)
.. .+.+..+.. . ..+.++.++|++. ++++...++.|.+||+.+++.+. .+. +...+..++|+|
T Consensus 255 ~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~sp 333 (543)
T 1nir_A 255 GETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDS 333 (543)
T ss_dssp TTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECT
T ss_pred ccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCcCccCceECC
Confidence 85 444444432 2 2688999999765 56677789999999998765433 333 455678899999
Q ss_pred CCCEEEEE-cCCCeEEEEcCCCCcceeEeec----ccccEEEEEECCC-CCEEEEee-CCCcEEEEEccC-------CCC
Q psy9936 143 YNACICLG-HRNGTVTMWSPTVQKPLASLLC----HKAGIQSVAVNHT-GTYMATSA-GDSQLRIWDVRN-------LEG 208 (315)
Q Consensus 143 ~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~----~~~~i~~~~~sp~-g~~l~~~~-~d~~i~iwd~~~-------~~~ 208 (315)
+|++|+++ ..+++|.+||+.+++.+..+.. |.+....+ ++|+ |.+++++. .|++|.+||+.+ . +
T Consensus 334 dg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~-~ 411 (543)
T 1nir_A 334 SHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAW-K 411 (543)
T ss_dssp TSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBT-S
T ss_pred CCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcC-e
Confidence 99977655 5688999999999998887764 55444333 4677 66777775 689999999988 6 8
Q ss_pred CeeEeccCC-CceeEEEccCCeEEEEc---------CCEEEecCC-------------------------Cceeeccccc
Q psy9936 209 PLNTFRTRT-PINNLAFSQRGLLATSR---------GNIVEFLKP-------------------------PEINFEPRRK 253 (315)
Q Consensus 209 ~~~~~~~~~-~v~~~~~s~~g~~~~~~---------~~~i~~~~~-------------------------~~~~~~~~~~ 253 (315)
+++.+..+. ++..+.|+|+|..+.+. +++|.+|+. ..++|+|+|+
T Consensus 412 ~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~ 491 (543)
T 1nir_A 412 KVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGD 491 (543)
T ss_dssp EEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSS
T ss_pred EEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCC
Confidence 888998875 57899999999644442 568887766 2567899999
Q ss_pred ccccC
Q psy9936 254 ANKAG 258 (315)
Q Consensus 254 ~~~~~ 258 (315)
.+..+
T Consensus 492 ~~~~s 496 (543)
T 1nir_A 492 EVWFS 496 (543)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88754
No 133
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.95 E-value=2.2e-25 Score=184.50 Aligned_cols=233 Identities=13% Similarity=0.091 Sum_probs=175.9
Q ss_pred EcCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEeCCeEEEEeCCC-CEEEEe-ecC--CceEEEEEcCCCc
Q psy9936 28 GGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQKDWVYIYDNQG-IELHCL-KVL--NKVTRMEFLPYHF 103 (315)
Q Consensus 28 ~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~~~-~~~~~~-~~~--~~v~~~~~~~~~~ 103 (315)
++.++.|++||+.+++......+...+.+++|+|++++|+++.++.|++||+.+ .....+ ... ..+.+++|+|+++
T Consensus 18 ~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~ 97 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGA 97 (297)
T ss_dssp CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSS
T ss_pred CCcceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEeccccccccccceEECCCCC
Confidence 457899999999999988777788899999999999999999999999999966 444333 222 5788999999999
Q ss_pred eEEEEcC--CC--eEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEE-EEcCCCeEEEEcCCC-CcceeEeecccccE
Q psy9936 104 LLATASE--EG--YLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACIC-LGHRNGTVTMWSPTV-QKPLASLLCHKAGI 177 (315)
Q Consensus 104 ~l~~~~~--d~--~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~-~~~~d~~i~i~d~~~-~~~~~~~~~~~~~i 177 (315)
+|++++. ++ .|..+++.++. ...+..+. .+..++|+|++++|+ +++.++.+.+|+++. ......+..+...+
T Consensus 98 ~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 175 (297)
T 2ojh_A 98 LYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRN 175 (297)
T ss_dssp EEEEEECTTTSSCEEEEEETTCCC-CEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCE
T ss_pred EEEEEEeCCCCcceEEEEECCCCc-eEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCcc
Confidence 9999883 33 45555555544 34444333 488899999999877 677899999998542 23445666688899
Q ss_pred EEEEECCCCCEEEEee-CCCcEEEEEccCCCCCeeEeccCC-CceeEEEccCCeEE--EEcC-----------CEEEecC
Q psy9936 178 QSVAVNHTGTYMATSA-GDSQLRIWDVRNLEGPLNTFRTRT-PINNLAFSQRGLLA--TSRG-----------NIVEFLK 242 (315)
Q Consensus 178 ~~~~~sp~g~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~g~~~--~~~~-----------~~i~~~~ 242 (315)
.+++|+|+|++|++++ .++.+++|++......+..+..+. .+..++|+|+|.++ ++.+ +.|..|+
T Consensus 176 ~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d 255 (297)
T 2ojh_A 176 DGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMD 255 (297)
T ss_dssp EEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEE
T ss_pred ccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEe
Confidence 9999999999888766 588999999873225666665554 58899999999533 3333 3477665
Q ss_pred C------------------CceeecccccccccCCcch
Q psy9936 243 P------------------PEINFEPRRKANKAGGSVQ 262 (315)
Q Consensus 243 ~------------------~~~~~~~~~~~~~~~~~~~ 262 (315)
+ ..++|+|+++.++.++.+.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 256 MDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp TTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred cCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 4 5678999999888776554
No 134
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.95 E-value=7.9e-25 Score=185.36 Aligned_cols=233 Identities=14% Similarity=0.139 Sum_probs=169.4
Q ss_pred CCcEEEEEEcCCCCEEEEEcCC-CeEEEEEcc--CceE--EEEecCCCceeEEEEeecCcEEEEEe--CCeEEEEeCC-C
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKR-GHVAAFDWV--RKTL--ACEMNVMEEVYDIKWLHLETMFAVAQ--KDWVYIYDNQ-G 81 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~d-g~i~v~~~~--~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~~~~-~ 81 (315)
...+.+++|+|+|++|++++.+ +.|.+|++. +++. +..+.....+..++|+|++++|+++. ++.|.+|++. +
T Consensus 37 ~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~ 116 (343)
T 1ri6_A 37 PGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDG 116 (343)
T ss_dssp SSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred CCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCC
Confidence 5678899999999988888776 899999987 5553 34444445789999999999776665 6889999983 2
Q ss_pred ---CEEEEeecCCceEEEEEcCCCceEEEEc-CCCeEEEEEccC-CeEEE----Eecc-CCCCeEEEEEcCCCCEEEEE-
Q psy9936 82 ---IELHCLKVLNKVTRMEFLPYHFLLATAS-EEGYLSWLDTSI-GKIVS----DFSA-KKGKLSVMTQNPYNACICLG- 150 (315)
Q Consensus 82 ---~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~-~~~~~----~~~~-~~~~v~~~~~~p~~~~l~~~- 150 (315)
.....+.....+.+++|+|+++++++++ .++.|.+||+.+ ++... .+.. ....+..++|+|+|++++++
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~ 196 (343)
T 1ri6_A 117 LPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVN 196 (343)
T ss_dssp EEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEE
T ss_pred ccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEe
Confidence 2223344456789999999999887776 889999999987 64432 2222 33468889999999976554
Q ss_pred cCCCeEEEEcCCC--Ccc--eeEee----cc--cccEEEEEECCCCCEEEEe-eCCCcEEEEEccC--C-CCCeeEeccC
Q psy9936 151 HRNGTVTMWSPTV--QKP--LASLL----CH--KAGIQSVAVNHTGTYMATS-AGDSQLRIWDVRN--L-EGPLNTFRTR 216 (315)
Q Consensus 151 ~~d~~i~i~d~~~--~~~--~~~~~----~~--~~~i~~~~~sp~g~~l~~~-~~d~~i~iwd~~~--~-~~~~~~~~~~ 216 (315)
..++.|.+||++. ++. ...+. ++ ...+..++|+|+|++|+++ ..++.|.+||+.. + ...+..+..+
T Consensus 197 ~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~ 276 (343)
T 1ri6_A 197 ELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTE 276 (343)
T ss_dssp TTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECS
T ss_pred CCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCC
Confidence 5789999999954 432 22222 11 2356789999999988754 4789999999983 2 0344445555
Q ss_pred CCceeEEEccCCe-EEEE--cCCEEEecC
Q psy9936 217 TPINNLAFSQRGL-LATS--RGNIVEFLK 242 (315)
Q Consensus 217 ~~v~~~~~s~~g~-~~~~--~~~~i~~~~ 242 (315)
..+..++|+|+|. ++++ .++.+.+|+
T Consensus 277 ~~~~~~~~s~dg~~l~~~~~~~~~v~v~~ 305 (343)
T 1ri6_A 277 TQPRGFNVDHSGKYLIAAGQKSHHISVYE 305 (343)
T ss_dssp SSCCCEEECTTSSEEEEECTTTCEEEEEE
T ss_pred CccceEEECCCCCEEEEecCCCCeEEEEE
Confidence 5689999999995 3333 368999984
No 135
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.94 E-value=1.5e-24 Score=194.87 Aligned_cols=241 Identities=10% Similarity=0.037 Sum_probs=191.4
Q ss_pred EEcCCCCEEEEEcCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEe-CCeEEEEeC--C-CCEEEEeecCCc
Q psy9936 17 NYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQ-KDWVYIYDN--Q-GIELHCLKVLNK 92 (315)
Q Consensus 17 ~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~--~-~~~~~~~~~~~~ 92 (315)
+|+|++.++++++.+++|.+||..+++++..+.....+..++|+|+|++|++++ ++.|.+||+ . +..+..+.....
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~ 223 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIE 223 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCC
Confidence 489999999999999999999999999998887444489999999999998876 799999999 4 445556666678
Q ss_pred eEEEEEcC----CCceEEEEcC-CCeEEEEEccCCeEEEEeccC----------C-CCeEEEEEcCCCC-EEEEEcCCCe
Q psy9936 93 VTRMEFLP----YHFLLATASE-EGYLSWLDTSIGKIVSDFSAK----------K-GKLSVMTQNPYNA-CICLGHRNGT 155 (315)
Q Consensus 93 v~~~~~~~----~~~~l~~~~~-d~~i~~~d~~~~~~~~~~~~~----------~-~~v~~~~~~p~~~-~l~~~~~d~~ 155 (315)
+..++|+| +|+++++++. +++|.+||..+++++..+..+ . ..+..+.++|++. ++++...++.
T Consensus 224 p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~ 303 (543)
T 1nir_A 224 ARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGK 303 (543)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred cceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCe
Confidence 89999999 9999999884 899999999999988887642 2 2688999999776 5566778999
Q ss_pred EEEEcCCCCccee--EeecccccEEEEEECCCCCEEEEee-CCCcEEEEEccCCCCCeeEeccCC---CceeEE-EccC-
Q psy9936 156 VTMWSPTVQKPLA--SLLCHKAGIQSVAVNHTGTYMATSA-GDSQLRIWDVRNLEGPLNTFRTRT---PINNLA-FSQR- 227 (315)
Q Consensus 156 i~i~d~~~~~~~~--~~~~~~~~i~~~~~sp~g~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~---~v~~~~-~s~~- 227 (315)
|.+||+.+.+.+. .+. +...+.++.|+|+|++|++++ .+++|.+||+.++ +++..+.... +-..+. ++|+
T Consensus 304 i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg-~l~~~i~~g~~ph~g~g~~~~~p~~ 381 (543)
T 1nir_A 304 VLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDR-RLSALVDVGKTPHPGRGANFVHPKY 381 (543)
T ss_dssp EEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTT-EEEEEEECSSSBCCTTCEEEEETTT
T ss_pred EEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEEECCCC-eEEEeeccCCCCCCCCCcccCCCCC
Confidence 9999999876554 443 566788999999999876654 5889999999998 8887776421 112233 4677
Q ss_pred CeEEEE---cCCEEEecCC-----------------------CceeecccccccccCC
Q psy9936 228 GLLATS---RGNIVEFLKP-----------------------PEINFEPRRKANKAGG 259 (315)
Q Consensus 228 g~~~~~---~~~~i~~~~~-----------------------~~~~~~~~~~~~~~~~ 259 (315)
|.+.++ ++++|.+|+. ..+.++|+++.+.+++
T Consensus 382 g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~ 439 (543)
T 1nir_A 382 GPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDT 439 (543)
T ss_dssp EEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECC
T ss_pred ccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEec
Confidence 554443 3688987743 4588999999998876
No 136
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.94 E-value=3.1e-26 Score=213.30 Aligned_cols=248 Identities=8% Similarity=-0.010 Sum_probs=186.5
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEecCCC----ceeEEEEeecCcEEEEEeC----------CeEE
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMNVME----EVYDIKWLHLETMFAVAQK----------DWVY 75 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~~~----------~~i~ 75 (315)
...+.+++|+|||+++++ +.||.|++||+.+++....+.+.. .+.+++|+|||++|+++.+ +.++
T Consensus 16 ~~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~ 94 (723)
T 1xfd_A 16 KIHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYV 94 (723)
T ss_dssp CCCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEE
T ss_pred cccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEE
Confidence 344678999999997766 689999999999998877776433 4899999999999988863 7899
Q ss_pred EEeCCCCEEEEeecC----CceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCe----------------
Q psy9936 76 IYDNQGIELHCLKVL----NKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKL---------------- 135 (315)
Q Consensus 76 i~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v---------------- 135 (315)
+||+.+.....+... ..+..++|||||+.|++++. +.|++||+.+++.......+...+
T Consensus 95 ~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~ 173 (723)
T 1xfd_A 95 LSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILK 173 (723)
T ss_dssp EEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSS
T ss_pred EEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEecc
Confidence 999976554444432 34888999999999999886 799999999887766555444333
Q ss_pred --EEEEEcCCCCEEEEEcCCC----------------------------------eEEEEcCCCCcceeEeecc------
Q psy9936 136 --SVMTQNPYNACICLGHRNG----------------------------------TVTMWSPTVQKPLASLLCH------ 173 (315)
Q Consensus 136 --~~~~~~p~~~~l~~~~~d~----------------------------------~i~i~d~~~~~~~~~~~~~------ 173 (315)
.+++|+|||+.|++++.++ .|.+||+.+++....+..+
T Consensus 174 ~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~ 253 (723)
T 1xfd_A 174 THIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMR 253 (723)
T ss_dssp SSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGS
T ss_pred CcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCc
Confidence 7899999999999886542 8999999988765666544
Q ss_pred cccEEEEEECCCCCEEEEeeC----CCcEEEEEccCCCCCeeEeccC-C-Cc----eeEEEccCCe--EEE-E-cCC---
Q psy9936 174 KAGIQSVAVNHTGTYMATSAG----DSQLRIWDVRNLEGPLNTFRTR-T-PI----NNLAFSQRGL--LAT-S-RGN--- 236 (315)
Q Consensus 174 ~~~i~~~~~sp~g~~l~~~~~----d~~i~iwd~~~~~~~~~~~~~~-~-~v----~~~~~s~~g~--~~~-~-~~~--- 236 (315)
...+..++|||||++|++.+. +..|++||+.++ ++...+..+ . .+ ..++|+|||. +++ + .++
T Consensus 254 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g-~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 332 (723)
T 1xfd_A 254 EYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTG-VCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRG 332 (723)
T ss_dssp SEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTC-CEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSS
T ss_pred cceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCC-cceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCc
Confidence 568899999999998877653 357999999987 665554332 2 23 3899999995 332 3 355
Q ss_pred ---EEEecC---------C---C--------ceeecccccccccCCc
Q psy9936 237 ---IVEFLK---------P---P--------EINFEPRRKANKAGGS 260 (315)
Q Consensus 237 ---~i~~~~---------~---~--------~~~~~~~~~~~~~~~~ 260 (315)
.|..|+ + + .++|+|+++.++..+.
T Consensus 333 ~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~ 379 (723)
T 1xfd_A 333 KFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLST 379 (723)
T ss_dssp CEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEES
T ss_pred ceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEc
Confidence 466666 2 0 1579999998865443
No 137
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.94 E-value=6.6e-26 Score=211.70 Aligned_cols=246 Identities=9% Similarity=0.017 Sum_probs=188.4
Q ss_pred cEEEEEEcCCCCEEEEEcCCCeEEEEEccCc---eEEEEecCCCceeEEEEeecCcEEEEEeCCeEEEEeCCCCEEEEee
Q psy9936 12 GIYRMNYTKNGRHLLLGGKRGHVAAFDWVRK---TLACEMNVMEEVYDIKWLHLETMFAVAQKDWVYIYDNQGIELHCLK 88 (315)
Q Consensus 12 ~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~~~~~~~~~~ 88 (315)
.+.+++|||||++|++++. +.|++||+.++ .......+...+..++|+|||++|+.+.++.|++||+.+.....+.
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~ 188 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLT 188 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEECC
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEec
Confidence 4788999999999998876 89999999988 5554444777899999999999999999999999999776655543
Q ss_pred cC--Cc----------------eEEEEEcCCCceEEEEcCCC---------------------------------eEEEE
Q psy9936 89 VL--NK----------------VTRMEFLPYHFLLATASEEG---------------------------------YLSWL 117 (315)
Q Consensus 89 ~~--~~----------------v~~~~~~~~~~~l~~~~~d~---------------------------------~i~~~ 117 (315)
.. .. +.+++|+|||++|++++.|+ .|.+|
T Consensus 189 ~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~ 268 (741)
T 2ecf_A 189 ADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVI 268 (741)
T ss_dssp CCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEE
T ss_pred cCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEE
Confidence 22 11 47899999999999987665 78899
Q ss_pred EccC-CeEEEEec--cCCCCeEEEEEcCCCCEEEEEcC-----CCeEEEEcCCCCcceeEeecccc----cEEEEEECCC
Q psy9936 118 DTSI-GKIVSDFS--AKKGKLSVMTQNPYNACICLGHR-----NGTVTMWSPTVQKPLASLLCHKA----GIQSVAVNHT 185 (315)
Q Consensus 118 d~~~-~~~~~~~~--~~~~~v~~~~~~p~~~~l~~~~~-----d~~i~i~d~~~~~~~~~~~~~~~----~i~~~~~sp~ 185 (315)
|+.+ ++...... .|...+..++| |||++|++++. +..|.+||+.+++....+..+.. .+..++|+||
T Consensus 269 d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spd 347 (741)
T 2ecf_A 269 SPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDD 347 (741)
T ss_dssp CSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTT
T ss_pred ECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCC
Confidence 9988 77554432 36677899999 99998887653 56899999999987766665443 3468999999
Q ss_pred CCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-CceeE-EEccCCe-E-EEEc-CC--EEEecCC---------------
Q psy9936 186 GTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-PINNL-AFSQRGL-L-ATSR-GN--IVEFLKP--------------- 243 (315)
Q Consensus 186 g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~-~~s~~g~-~-~~~~-~~--~i~~~~~--------------- 243 (315)
|+++++++.|+.++||.+..... ...+..+. .+.++ .|+|+|. + +++. ++ .+++|..
T Consensus 348 g~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~~~~ 426 (741)
T 2ecf_A 348 GSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSKAPG 426 (741)
T ss_dssp SCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCCSCS
T ss_pred CeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeecccCCC
Confidence 99999999999888888763214 55555544 57777 5999994 3 3333 33 6666643
Q ss_pred -CceeecccccccccCCc
Q psy9936 244 -PEINFEPRRKANKAGGS 260 (315)
Q Consensus 244 -~~~~~~~~~~~~~~~~~ 260 (315)
..++|+|+++.++....
T Consensus 427 ~~~~~~spdg~~l~~~~~ 444 (741)
T 2ecf_A 427 MHSASFARNASVYVDSWS 444 (741)
T ss_dssp EEEEEECTTSSEEEEEEE
T ss_pred ceEEEECCCCCEEEEEec
Confidence 25789999988876543
No 138
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.94 E-value=3.5e-24 Score=180.88 Aligned_cols=242 Identities=9% Similarity=0.046 Sum_probs=177.5
Q ss_pred EEEcCCCCE-EEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe--CCeEEEEeCCCCE--EEEeec
Q psy9936 16 MNYTKNGRH-LLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ--KDWVYIYDNQGIE--LHCLKV 89 (315)
Q Consensus 16 ~~~s~~~~~-l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~--~~~i~i~~~~~~~--~~~~~~ 89 (315)
..|.+++.+ +++.+.++.|.+||..+++....+. +...+ .++|+|++++++++. ++.|++||+.+.. ...+..
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc
Confidence 346666665 6677788999999999999877766 44456 999999998666554 6799999995443 444555
Q ss_pred CCceEE-EEEcCCCceEEEEcCCC---eEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEE-cCCCe-EEEEcCCC
Q psy9936 90 LNKVTR-MEFLPYHFLLATASEEG---YLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLG-HRNGT-VTMWSPTV 163 (315)
Q Consensus 90 ~~~v~~-~~~~~~~~~l~~~~~d~---~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~-~~d~~-i~i~d~~~ 163 (315)
...... ++|+|++++++++..++ .|.+||+.+++.+..+..+ ..+..++|+|+|++++++ ..++. |.+|++..
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~ 160 (331)
T 3u4y_A 82 GQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDA 160 (331)
T ss_dssp CSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECT
T ss_pred CCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECC
Confidence 544455 99999999998655553 8999999999888877654 457899999999865554 55577 99999886
Q ss_pred Cccee----EeecccccEEEEEECCCCCEEEEe-eCCCcEEEEEccCCCCC---eeEeccCCCceeEEEccCCe-EEEE-
Q psy9936 164 QKPLA----SLLCHKAGIQSVAVNHTGTYMATS-AGDSQLRIWDVRNLEGP---LNTFRTRTPINNLAFSQRGL-LATS- 233 (315)
Q Consensus 164 ~~~~~----~~~~~~~~i~~~~~sp~g~~l~~~-~~d~~i~iwd~~~~~~~---~~~~~~~~~v~~~~~s~~g~-~~~~- 233 (315)
...+. ........+..++|+|+|++++++ ..++.|.+||+.++ +. +..+..+..+..++|+|||. ++++
T Consensus 161 ~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~-~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~ 239 (331)
T 3u4y_A 161 DGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNP-ENITLLNAVGTNNLPGTIVVSRDGSTVYVLT 239 (331)
T ss_dssp TCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSST-TSCEEEEEEECSSCCCCEEECTTSSEEEEEC
T ss_pred CCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCC-cccceeeeccCCCCCceEEECCCCCEEEEEE
Confidence 44331 111234567899999999966555 46889999999988 77 77777777789999999996 3333
Q ss_pred -cCCEEEecCC-------------------------CceeecccccccccCCc
Q psy9936 234 -RGNIVEFLKP-------------------------PEINFEPRRKANKAGGS 260 (315)
Q Consensus 234 -~~~~i~~~~~-------------------------~~~~~~~~~~~~~~~~~ 260 (315)
.++.|..|++ ..++|+|+++++..++.
T Consensus 240 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~ 292 (331)
T 3u4y_A 240 ESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISAN 292 (331)
T ss_dssp SSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEET
T ss_pred cCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecC
Confidence 3566777765 12589999988755443
No 139
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.94 E-value=3.6e-25 Score=205.69 Aligned_cols=246 Identities=13% Similarity=0.118 Sum_probs=186.4
Q ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEeCCeEEEEeCCC-----CEEE
Q psy9936 11 FGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQKDWVYIYDNQG-----IELH 85 (315)
Q Consensus 11 ~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~~~-----~~~~ 85 (315)
..|.+++|||| ..++.+. ++.|++||+.+++......+...+.+++|+|||+.|+.+.++.|++|++.+ ....
T Consensus 82 ~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~ 159 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAI 159 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCE
T ss_pred cCceeEEECCC-CeEEEEE-CCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCcE
Confidence 57999999999 6666553 589999999999887777677789999999999999998999999999965 4433
Q ss_pred Eee-cC-Cc--------------eEEEEEcCCCceEEEEc---------------------------------CCCeEEE
Q psy9936 86 CLK-VL-NK--------------VTRMEFLPYHFLLATAS---------------------------------EEGYLSW 116 (315)
Q Consensus 86 ~~~-~~-~~--------------v~~~~~~~~~~~l~~~~---------------------------------~d~~i~~ 116 (315)
.+. .. .. +.++.|+|||++|++++ .+..|.+
T Consensus 160 ~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~ 239 (706)
T 2z3z_A 160 AVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGI 239 (706)
T ss_dssp ESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEE
T ss_pred EeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEE
Confidence 322 22 22 47899999999999887 3467999
Q ss_pred EEccCCeEEEEec--cCCCCeEEEEEcCCCCEEEEEcCCC-----eEEEEcCCCCcceeEee--cccc---cEEEEEECC
Q psy9936 117 LDTSIGKIVSDFS--AKKGKLSVMTQNPYNACICLGHRNG-----TVTMWSPTVQKPLASLL--CHKA---GIQSVAVNH 184 (315)
Q Consensus 117 ~d~~~~~~~~~~~--~~~~~v~~~~~~p~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~--~~~~---~i~~~~~sp 184 (315)
||+.+++...... .|...+..++|+|||+.|++++.++ .|.+||+.+++....+. .+.. .+.+++|+|
T Consensus 240 ~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp 319 (706)
T 2z3z_A 240 YHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLP 319 (706)
T ss_dssp EETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECT
T ss_pred EECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeec
Confidence 9999887654432 4566789999999999998877665 99999999884444332 2222 246789999
Q ss_pred --CCCEEEEeeCCCcEEEEEcc-CCCCCeeEeccCC-Ccee-EEEccCCe--EEEEc-CC----EEEecCC---------
Q psy9936 185 --TGTYMATSAGDSQLRIWDVR-NLEGPLNTFRTRT-PINN-LAFSQRGL--LATSR-GN----IVEFLKP--------- 243 (315)
Q Consensus 185 --~g~~l~~~~~d~~i~iwd~~-~~~~~~~~~~~~~-~v~~-~~~s~~g~--~~~~~-~~----~i~~~~~--------- 243 (315)
||+++++++.|+.++||++. ++ ..+..+..+. .+.+ ++|+|+|. ++++. ++ .|..|+.
T Consensus 320 ~~dg~~l~~~~~~g~~~l~~~~~~~-~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~ 398 (706)
T 2z3z_A 320 GSNNQFIWQSRRDGWNHLYLYDTTG-RLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKDLT 398 (706)
T ss_dssp TCSSEEEEEECTTSSCEEEEEETTS-CEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEESC
T ss_pred CCCCEEEEEEccCCccEEEEEECCC-CEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCceecc
Confidence 99999999999999999887 44 5666665554 4666 79999994 33333 33 5555543
Q ss_pred -----CceeecccccccccCC
Q psy9936 244 -----PEINFEPRRKANKAGG 259 (315)
Q Consensus 244 -----~~~~~~~~~~~~~~~~ 259 (315)
..++|+|++++++...
T Consensus 399 ~~~~~~~~~~spdg~~l~~~~ 419 (706)
T 2z3z_A 399 PESGMHRTQLSPDGSAIIDIF 419 (706)
T ss_dssp CSSSEEEEEECTTSSEEEEEE
T ss_pred CCCceEEEEECCCCCEEEEEe
Confidence 4578999999887653
No 140
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.94 E-value=1.3e-23 Score=177.44 Aligned_cols=231 Identities=6% Similarity=0.026 Sum_probs=168.9
Q ss_pred CCcEEEEEEcCCCCEEEEEcC-CCeEEEEEccCceE-EEEecC-CCceeEEEEeecCcEEEEEeCC----eEEEEeCCCC
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGK-RGHVAAFDWVRKTL-ACEMNV-MEEVYDIKWLHLETMFAVAQKD----WVYIYDNQGI 82 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~-dg~i~v~~~~~~~~-~~~~~~-~~~v~~~~~~~~~~~l~~~~~~----~i~i~~~~~~ 82 (315)
...+ +++|+|+|+++++++. ++.|.+||+.+++. ...+.. ..+..+++|+|++++++++.++ .|.+||+...
T Consensus 40 ~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~ 118 (331)
T 3u4y_A 40 YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKN 118 (331)
T ss_dssp CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTT
T ss_pred CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCC
Confidence 4455 9999999997665554 88999999999887 666654 4444449999999988865543 8999999654
Q ss_pred -EEEEeecCCceEEEEEcCCCceEEEE-cCCCe-EEEEEccCCeEE----EEeccCCCCeEEEEEcCCCCEEE-EEcCCC
Q psy9936 83 -ELHCLKVLNKVTRMEFLPYHFLLATA-SEEGY-LSWLDTSIGKIV----SDFSAKKGKLSVMTQNPYNACIC-LGHRNG 154 (315)
Q Consensus 83 -~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~-i~~~d~~~~~~~----~~~~~~~~~v~~~~~~p~~~~l~-~~~~d~ 154 (315)
.+..+.....+.+++|+|+|++++++ ..++. |.+|++.....+ .........+..++|+|+|++++ ++..++
T Consensus 119 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~ 198 (331)
T 3u4y_A 119 KFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGN 198 (331)
T ss_dssp EEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTT
T ss_pred CeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCC
Confidence 44555666778999999999865555 55577 999998753322 11113345588999999999655 455689
Q ss_pred eEEEEcCCCCcc---eeEeecccccEEEEEECCCCCEEEEee-CCCcEEEEEccCCCCC--eeEeccC----C----Cce
Q psy9936 155 TVTMWSPTVQKP---LASLLCHKAGIQSVAVNHTGTYMATSA-GDSQLRIWDVRNLEGP--LNTFRTR----T----PIN 220 (315)
Q Consensus 155 ~i~i~d~~~~~~---~~~~~~~~~~i~~~~~sp~g~~l~~~~-~d~~i~iwd~~~~~~~--~~~~~~~----~----~v~ 220 (315)
.|.+||+.+++. +..+.. ...+..++|+|+|++|++++ .++.|.+||+.++ +. +..+... . ...
T Consensus 199 ~v~v~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 276 (331)
T 3u4y_A 199 SIGILETQNPENITLLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSG-TLSFVKSFGHGLLIDPRPLFGAN 276 (331)
T ss_dssp EEEEEECSSTTSCEEEEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTT-EEEEEEEEECCCCCCCGGGTTCC
T ss_pred eEEEEECCCCcccceeeeccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCC-ceeeecccccccccCCCCccccc
Confidence 999999999988 777763 46678999999999776654 5778999999987 54 3333222 1 135
Q ss_pred eEEEccCCe--EEEEc-CCEEEecCC
Q psy9936 221 NLAFSQRGL--LATSR-GNIVEFLKP 243 (315)
Q Consensus 221 ~~~~s~~g~--~~~~~-~~~i~~~~~ 243 (315)
.++|+|||. ++++. ++.|.+|+.
T Consensus 277 ~~~~spdg~~l~v~~~~~~~v~v~d~ 302 (331)
T 3u4y_A 277 QMALNKTETKLFISANISRELKVFTI 302 (331)
T ss_dssp CEEECTTSSEEEEEETTTTEEEEEET
T ss_pred ceEECCCCCEEEEecCCCCcEEEEEe
Confidence 689999994 34444 569999987
No 141
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.94 E-value=2e-23 Score=177.66 Aligned_cols=217 Identities=15% Similarity=0.119 Sum_probs=174.6
Q ss_pred CCcEEEEEEcCCCCEEE-EEcCCCeEEEEEccCceEEEEecCCC----------ceeEEEEeecCcEEEEEe---CCeEE
Q psy9936 10 QFGIYRMNYTKNGRHLL-LGGKRGHVAAFDWVRKTLACEMNVME----------EVYDIKWLHLETMFAVAQ---KDWVY 75 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~-~~~~dg~i~v~~~~~~~~~~~~~~~~----------~v~~~~~~~~~~~l~~~~---~~~i~ 75 (315)
...+.+++|+|+|++++ +...++.|.+||..+++....+.... .+.++.|+|+++.++++. ++.|.
T Consensus 88 ~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~ 167 (353)
T 3vgz_A 88 DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIW 167 (353)
T ss_dssp SSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEE
T ss_pred CCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEE
Confidence 44577899999999655 45567899999999999877776322 268899999998777664 67899
Q ss_pred EEeCCCCE-EEEee-cCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEecc----CCCCeEEEEEcCCCCEEEE
Q psy9936 76 IYDNQGIE-LHCLK-VLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSA----KKGKLSVMTQNPYNACICL 149 (315)
Q Consensus 76 i~~~~~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~----~~~~v~~~~~~p~~~~l~~ 149 (315)
+||..+.. ...+. +...+.+++|+|+++.+++++.++.|.+||+.+++....+.. +...+..++|+|+|+++++
T Consensus 168 ~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 247 (353)
T 3vgz_A 168 VVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFI 247 (353)
T ss_dssp EEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEE
T ss_pred EEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEE
Confidence 99996544 44454 345588999999999999999999999999999988877654 4456888999999997766
Q ss_pred EcC-CCeEEEEcCCCCcceeEeecccccEEEEEECCCCCEEEEee-CCCcEEEEEccCCCCCeeEeccCCCceeEEEccC
Q psy9936 150 GHR-NGTVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSA-GDSQLRIWDVRNLEGPLNTFRTRTPINNLAFSQR 227 (315)
Q Consensus 150 ~~~-d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~ 227 (315)
++. ++.|.+||+.+++.+..+.... ...++|+|+|+++++++ .++.|.+||+.++ +.+..+.....+.+++|+|+
T Consensus 248 ~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~-~~~~~~~~~~~~~~~~~s~d 324 (353)
T 3vgz_A 248 TDSKAAEVLVVDTRNGNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSY-KVVKTFDTPTHPNSLALSAD 324 (353)
T ss_dssp EESSSSEEEEEETTTCCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTT-EEEEEEECCSEEEEEEECTT
T ss_pred EeCCCCEEEEEECCCCcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCC-eEEEEEecCCCCCeEEEcCC
Confidence 654 5899999999998887776433 25799999999766555 6899999999998 88888877777899999999
Q ss_pred Ce
Q psy9936 228 GL 229 (315)
Q Consensus 228 g~ 229 (315)
|.
T Consensus 325 g~ 326 (353)
T 3vgz_A 325 GK 326 (353)
T ss_dssp SC
T ss_pred CC
Confidence 95
No 142
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.93 E-value=1e-24 Score=198.30 Aligned_cols=244 Identities=13% Similarity=0.033 Sum_probs=183.9
Q ss_pred CCcEEEEEEcCCCCEEEEEcC-CCeEEEEEccCceEEEEecCC-CceeEEEEeecCcEEEEEeC----C--eEEEEeC--
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGK-RGHVAAFDWVRKTLACEMNVM-EEVYDIKWLHLETMFAVAQK----D--WVYIYDN-- 79 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~-dg~i~v~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~----~--~i~i~~~-- 79 (315)
..+|++++|+|||++||+++. +|++.||++++++......+. ..+..+.|+|| ++++++.. . .|+.++.
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~ 99 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSR 99 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTS
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccC
Confidence 467999999999999998876 999999999888776666555 58999999999 77776652 3 3444566
Q ss_pred CCCEEEEeecCCceEEEEEcCCCce-EEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCC----C
Q psy9936 80 QGIELHCLKVLNKVTRMEFLPYHFL-LATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRN----G 154 (315)
Q Consensus 80 ~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d----~ 154 (315)
.+... .+.....+...+|+|+++. +++.+.++.+.+||+.+++.......+ . .+++|+|||++|++++.+ +
T Consensus 100 ~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-~--~~~~~spDG~~la~~~~~~~~~~ 175 (582)
T 3o4h_A 100 PGEEQ-RLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP-G--FGFVSDIRGDLIAGLGFFGGGRV 175 (582)
T ss_dssp TTCCE-ECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES-S--CEEEEEEETTEEEEEEEEETTEE
T ss_pred CCccc-cccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC-C--ceEEECCCCCEEEEEEEcCCCCe
Confidence 55544 4444455667788988753 333334445569999988766554433 2 789999999999988776 7
Q ss_pred eEEEEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCC--cEEEEEccCCCCCeeEeccCC-CceeEE--------
Q psy9936 155 TVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDS--QLRIWDVRNLEGPLNTFRTRT-PINNLA-------- 223 (315)
Q Consensus 155 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~--~i~iwd~~~~~~~~~~~~~~~-~v~~~~-------- 223 (315)
.|.+||+.+++.. .+..|...+..++|||||++|+++..++ .|++||+.++ .+. .+..+. .+..++
T Consensus 176 ~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~ 252 (582)
T 3o4h_A 176 SLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDG-SVE-DLELPSKDFSSYRPTAITWLG 252 (582)
T ss_dssp EEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTC-CEE-ECCCSCSHHHHHCCSEEEEEE
T ss_pred EEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCC-cEE-EccCCCcChhhhhhcccccee
Confidence 8999999988754 6677888999999999999999888888 8999999987 555 555443 466667
Q ss_pred EccCCeEE--EEcCCEEEecCC-----------CceeecccccccccCCcch
Q psy9936 224 FSQRGLLA--TSRGNIVEFLKP-----------PEINFEPRRKANKAGGSVQ 262 (315)
Q Consensus 224 ~s~~g~~~--~~~~~~i~~~~~-----------~~~~~~~~~~~~~~~~~~~ 262 (315)
|+|||.++ ++.++.+++|.+ ..++|+ +++.+++++.+.
T Consensus 253 ~spdg~~~~~~~~~g~~~l~~~g~~~~~~~~~v~~~~~s-dg~~l~~~s~~~ 303 (582)
T 3o4h_A 253 YLPDGRLAVVARREGRSAVFIDGERVEAPQGNHGRVVLW-RGKLVTSHTSLS 303 (582)
T ss_dssp ECTTSCEEEEEEETTEEEEEETTEEECCCSSEEEEEEEE-TTEEEEEEEETT
T ss_pred EcCCCcEEEEEEcCCcEEEEEECCeeccCCCceEEEEec-CCEEEEEEcCCC
Confidence 99999543 445889998864 356788 888887766554
No 143
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.93 E-value=1.1e-23 Score=177.87 Aligned_cols=215 Identities=9% Similarity=0.002 Sum_probs=165.6
Q ss_pred CEEEEEcCCCeEEEEEccCceEEEEecCCC---ceeEEEEeecCcEEEEEe--CCeEEEEeCCC-CEEEEeecCC-----
Q psy9936 23 RHLLLGGKRGHVAAFDWVRKTLACEMNVME---EVYDIKWLHLETMFAVAQ--KDWVYIYDNQG-IELHCLKVLN----- 91 (315)
Q Consensus 23 ~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~--~~~i~i~~~~~-~~~~~~~~~~----- 91 (315)
+++++++.++.|.+||+.+++....+.... .+..++|+|+++.++++. ++.|.+||+.+ ..+..+....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 478889999999999999999888877555 688999999997665543 67999999954 4444444332
Q ss_pred -ceEEEEEcCCCceEEEEc------------CCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCeEEE
Q psy9936 92 -KVTRMEFLPYHFLLATAS------------EEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNGTVTM 158 (315)
Q Consensus 92 -~v~~~~~~~~~~~l~~~~------------~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i 158 (315)
.+.+++|+|+|+++++++ .++.|.+||+.+++.+..+.. ...+..++|+|+|++|+++ ++.|.+
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~ 158 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHV 158 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEE
Confidence 677899999999888886 579999999999888777764 3457789999999988887 578999
Q ss_pred EcCCCCcceeEeecc-----------------------------------------------------------------
Q psy9936 159 WSPTVQKPLASLLCH----------------------------------------------------------------- 173 (315)
Q Consensus 159 ~d~~~~~~~~~~~~~----------------------------------------------------------------- 173 (315)
||+.+++.+..+..+
T Consensus 159 ~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~ 238 (337)
T 1pby_B 159 MDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRI 238 (337)
T ss_dssp EETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEE
T ss_pred EECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCC
Confidence 999877655443321
Q ss_pred -cccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCCCceeEEEccCCe--EEEEcCCEEEecCC
Q psy9936 174 -KAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRTPINNLAFSQRGL--LATSRGNIVEFLKP 243 (315)
Q Consensus 174 -~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~--~~~~~~~~i~~~~~ 243 (315)
...+.+++|+|+|++++++ ++.|.+||+.++ +.+..+..+..+.+++|+|+|. ++++.++.|.+|++
T Consensus 239 ~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~-~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~ 308 (337)
T 1pby_B 239 MDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKN-ASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDA 308 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEE--ESEEEEEETTTT-EEEEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEET
T ss_pred CCCceeeEEECCCCCEEEEe--CCeEEEEECCCC-cCcceecCCCceeeEEECCCCCEEEEEcCCCcEEEEEC
Confidence 1234468888888888877 678888888887 7777776666778888888884 44445788888876
No 144
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.93 E-value=1.1e-23 Score=178.77 Aligned_cols=223 Identities=9% Similarity=0.005 Sum_probs=172.3
Q ss_pred EEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEecCCC--ceeEEEEeecCcEEEEEe--CCeEEEEeCCCCEE-EEeec
Q psy9936 15 RMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMNVME--EVYDIKWLHLETMFAVAQ--KDWVYIYDNQGIEL-HCLKV 89 (315)
Q Consensus 15 ~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~--~~~i~i~~~~~~~~-~~~~~ 89 (315)
++++++++.++++++.++.|++||+.+++....+.... .+..++|+|+++.++++. ++.|.+||+.+... ..+..
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 46788899999999999999999999999888877544 688999999998665553 68999999965443 33432
Q ss_pred CC-------ceEEEEEcCCCceEEEEcCC------------CeEEEEEccCCe---EEEEeccCCCCeEEEEEcCCCCEE
Q psy9936 90 LN-------KVTRMEFLPYHFLLATASEE------------GYLSWLDTSIGK---IVSDFSAKKGKLSVMTQNPYNACI 147 (315)
Q Consensus 90 ~~-------~v~~~~~~~~~~~l~~~~~d------------~~i~~~d~~~~~---~~~~~~~~~~~v~~~~~~p~~~~l 147 (315)
.. .+..++|+|+|+++++++.+ +.|.+||+.+++ .+..+. +...+.+++|+|+|+ +
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l 161 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-L 161 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-E
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-E
Confidence 22 27889999999999988865 899999998743 333333 334588899999999 5
Q ss_pred EEEcCCCeEEEEcCCCCcceeEeeccc-----------------------------------------------------
Q psy9936 148 CLGHRNGTVTMWSPTVQKPLASLLCHK----------------------------------------------------- 174 (315)
Q Consensus 148 ~~~~~d~~i~i~d~~~~~~~~~~~~~~----------------------------------------------------- 174 (315)
++++. .|.+||+.+++.+..+..+.
T Consensus 162 ~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 239 (349)
T 1jmx_B 162 YVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVD 239 (349)
T ss_dssp EEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEE
T ss_pred EEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEe
Confidence 55544 39999999887666554221
Q ss_pred ---------------ccEEEEEECC-CCCEEEEeeCCCcEEEEEccCCCCCeeEeccCCCceeEEEccCCe--EEEEcCC
Q psy9936 175 ---------------AGIQSVAVNH-TGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRTPINNLAFSQRGL--LATSRGN 236 (315)
Q Consensus 175 ---------------~~i~~~~~sp-~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~--~~~~~~~ 236 (315)
..+..++|+| +|++++++ ++.|.+||+.++ +.+..+..+..+.+++|+|+|. ++++.++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~-~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~ 316 (349)
T 1jmx_B 240 LKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQR-KLIKAANLDHTYYCVAFDKKGDKLYLGGTFN 316 (349)
T ss_dssp TTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTT-EEEEEEECSSCCCEEEECSSSSCEEEESBSS
T ss_pred ccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccC-eEEEEEcCCCCccceEECCCCCEEEEecCCC
Confidence 1345678889 99999888 889999999998 7777777666788999999983 4445588
Q ss_pred EEEecCCC
Q psy9936 237 IVEFLKPP 244 (315)
Q Consensus 237 ~i~~~~~~ 244 (315)
.|.+|++.
T Consensus 317 ~v~v~d~~ 324 (349)
T 1jmx_B 317 DLAVFNPD 324 (349)
T ss_dssp EEEEEETT
T ss_pred eEEEEecc
Confidence 99999973
No 145
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.93 E-value=6.9e-24 Score=204.94 Aligned_cols=247 Identities=11% Similarity=0.071 Sum_probs=195.0
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccC-ceEEEEecCCCceeEEEEeecCcEEEEEeCCeEEEEeCCCCEEEEee
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVR-KTLACEMNVMEEVYDIKWLHLETMFAVAQKDWVYIYDNQGIELHCLK 88 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~~~~~~~~~~ 88 (315)
...+.++.|+++ .++++++.++.+.||.+.. +.....+.....+...+|+|||+.|+.+.++.|++|++.+..+..+.
T Consensus 203 ~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~~~~i~~~d~~~~~l~~l~ 281 (1045)
T 1k32_A 203 STHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSKGGSIYIFNPDTEKIEKIE 281 (1045)
T ss_dssp SSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEETTEEEEECTTTCCEEECC
T ss_pred CCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEeCCEEEEecCCceEeeeec
Confidence 678899999998 6667777888888887653 33334444334567789999999999999999999999665555433
Q ss_pred c------------CCceEEEEEc-CCCceEEEEcCCCeEEEEEccCCeEEEEeccCCC-CeEEEEEcCCCCEEEEEcCCC
Q psy9936 89 V------------LNKVTRMEFL-PYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKG-KLSVMTQNPYNACICLGHRNG 154 (315)
Q Consensus 89 ~------------~~~v~~~~~~-~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~-~v~~~~~~p~~~~l~~~~~d~ 154 (315)
. ...+.+++|+ |+|+.|++++ ++.+.+|++..+... .+..|.. .+..++|+ +|+.|++++.++
T Consensus 282 ~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s~~~ 358 (1045)
T 1k32_A 282 IGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD-TKVAFIHGTREG 358 (1045)
T ss_dssp CCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS-SEEEEEEEETTE
T ss_pred cCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEc-CCCeEEEEECCC
Confidence 2 2268899999 9999998887 789999999877654 4666777 89999999 999999988888
Q ss_pred eEE-EEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-CceeEEEccCCeEEE
Q psy9936 155 TVT-MWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-PINNLAFSQRGLLAT 232 (315)
Q Consensus 155 ~i~-i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~g~~~~ 232 (315)
.+. +||+.+++.. .+.+|...+..++|+|||++|++++.++.|++||+.++ +.......+. .+.+++|||||.+++
T Consensus 359 ~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg-~~~~~~~~~~~~v~~~~~SpDG~~la 436 (1045)
T 1k32_A 359 DFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETG-KPTVIERSREAMITDFTISDNSRFIA 436 (1045)
T ss_dssp EEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTC-CEEEEEECSSSCCCCEEECTTSCEEE
T ss_pred ceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCC-ceEEeccCCCCCccceEECCCCCeEE
Confidence 899 9999877543 44478889999999999999999999999999999988 6666664554 589999999996443
Q ss_pred E--cC----------CEEEecCC---------------CceeecccccccccCCcch
Q psy9936 233 S--RG----------NIVEFLKP---------------PEINFEPRRKANKAGGSVQ 262 (315)
Q Consensus 233 ~--~~----------~~i~~~~~---------------~~~~~~~~~~~~~~~~~~~ 262 (315)
. .+ +.|++|++ ..+.|+|+|+.++.++...
T Consensus 437 ~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~ 493 (1045)
T 1k32_A 437 YGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRS 493 (1045)
T ss_dssp EEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCC
T ss_pred EEecCccccccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEeccc
Confidence 2 22 37888876 3578999999888776543
No 146
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.92 E-value=3.6e-24 Score=199.43 Aligned_cols=246 Identities=9% Similarity=-0.018 Sum_probs=174.8
Q ss_pred cEEEEEEcCCCCEEEEEcCC---------CeEEEEEccCceEEEEec---CCCceeEEEEeecCcEEEEEeCCeEEEEeC
Q psy9936 12 GIYRMNYTKNGRHLLLGGKR---------GHVAAFDWVRKTLACEMN---VMEEVYDIKWLHLETMFAVAQKDWVYIYDN 79 (315)
Q Consensus 12 ~v~~~~~s~~~~~l~~~~~d---------g~i~v~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~ 79 (315)
.|.+++|||||++|++++.+ +.|++||+.+++...... +...+..++|+|||+.|+.++++.|++|++
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~ 141 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAH 141 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESS
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEECCeEEEEEC
Confidence 48999999999999998764 789999999887632222 233488999999999999999999999999
Q ss_pred CCCEEEEeec--CCc------------------eEEEEEcCCCceEEEEcCCC---------------------------
Q psy9936 80 QGIELHCLKV--LNK------------------VTRMEFLPYHFLLATASEEG--------------------------- 112 (315)
Q Consensus 80 ~~~~~~~~~~--~~~------------------v~~~~~~~~~~~l~~~~~d~--------------------------- 112 (315)
.+.....+.. ... +.+++|+|||+.|++++.++
T Consensus 142 ~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (723)
T 1xfd_A 142 VGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKA 221 (723)
T ss_dssp SSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBT
T ss_pred CCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCC
Confidence 6544333322 222 37899999999999887543
Q ss_pred -------eEEEEEccCCeEEEEeccC------CCCeEEEEEcCCCCEEEEEcC----CCeEEEEcCCCCcceeEeec-cc
Q psy9936 113 -------YLSWLDTSIGKIVSDFSAK------KGKLSVMTQNPYNACICLGHR----NGTVTMWSPTVQKPLASLLC-HK 174 (315)
Q Consensus 113 -------~i~~~d~~~~~~~~~~~~~------~~~v~~~~~~p~~~~l~~~~~----d~~i~i~d~~~~~~~~~~~~-~~ 174 (315)
.|++||+.+++....+..+ ...+..++|+|||+++++... +..|.+||+.+++....+.. +.
T Consensus 222 G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~ 301 (723)
T 1xfd_A 222 GSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESE 301 (723)
T ss_dssp TSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECS
T ss_pred CCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccC
Confidence 7999999988765566544 556899999999998876643 35899999999887665543 33
Q ss_pred ccEE----EEEECCCCCEEEE--eeCCC------cEEEEE-ccCCCC--CeeEecc-CCCcee-EEEccCCeE--EEEcC
Q psy9936 175 AGIQ----SVAVNHTGTYMAT--SAGDS------QLRIWD-VRNLEG--PLNTFRT-RTPINN-LAFSQRGLL--ATSRG 235 (315)
Q Consensus 175 ~~i~----~~~~sp~g~~l~~--~~~d~------~i~iwd-~~~~~~--~~~~~~~-~~~v~~-~~~s~~g~~--~~~~~ 235 (315)
..+. .++|+|||++|+. +..++ .|.+|| ..++ . +...+.. +..+.. ++|+|||.. +++.+
T Consensus 302 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~ 380 (723)
T 1xfd_A 302 AWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNS-SNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTE 380 (723)
T ss_dssp SCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCS-SSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESS
T ss_pred CEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCC-CccceeEeecCCeEEEeeeEEcCCCCEEEEEEcC
Confidence 4443 7899999997765 45666 466777 3343 3 1444433 334554 699999953 33333
Q ss_pred ---CEEEecCC---------------------CceeecccccccccC
Q psy9936 236 ---NIVEFLKP---------------------PEINFEPRRKANKAG 258 (315)
Q Consensus 236 ---~~i~~~~~---------------------~~~~~~~~~~~~~~~ 258 (315)
+.+++|.. ..++|+|+++.++..
T Consensus 381 ~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~ 427 (723)
T 1xfd_A 381 DLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLK 427 (723)
T ss_dssp SCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEE
T ss_pred CCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEE
Confidence 55555532 247789999877653
No 147
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.92 E-value=4.3e-23 Score=174.65 Aligned_cols=241 Identities=12% Similarity=0.118 Sum_probs=170.6
Q ss_pred EEEEEcCCCeEEEEEcc-Cc--eEEEEecCCCceeEEEEeecCcEEEEEe-C-CeEEEEeCC--CCEEE---EeecCCce
Q psy9936 24 HLLLGGKRGHVAAFDWV-RK--TLACEMNVMEEVYDIKWLHLETMFAVAQ-K-DWVYIYDNQ--GIELH---CLKVLNKV 93 (315)
Q Consensus 24 ~l~~~~~dg~i~v~~~~-~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~-~~i~i~~~~--~~~~~---~~~~~~~v 93 (315)
.+++++.++.|++|++. ++ +....+.+...+.+++|+|++++|+++. + +.|.+|+++ +.... .+.....+
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 86 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSL 86 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCC
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCC
Confidence 34444779999999985 33 3455566778899999999999887776 3 899999985 33332 33444578
Q ss_pred EEEEEcCCCceEEEEc-CCCeEEEEEcc---CCeEEEEeccCCCCeEEEEEcCCCCEEEEEc-CCCeEEEEcCCC-Ccce
Q psy9936 94 TRMEFLPYHFLLATAS-EEGYLSWLDTS---IGKIVSDFSAKKGKLSVMTQNPYNACICLGH-RNGTVTMWSPTV-QKPL 167 (315)
Q Consensus 94 ~~~~~~~~~~~l~~~~-~d~~i~~~d~~---~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~-~d~~i~i~d~~~-~~~~ 167 (315)
..++|+|+++++++++ .++.|.+||+. ..+....+..+ ..+.+++|+|+|+++++++ .++.|.+||+.+ ++..
T Consensus 87 ~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 165 (343)
T 1ri6_A 87 THISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLV 165 (343)
T ss_dssp SEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEE
T ss_pred cEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCcee
Confidence 9999999999776665 48899999994 34455555443 4588899999999888776 899999999987 5432
Q ss_pred e----Eeec-ccccEEEEEECCCCCEEEEee-CCCcEEEEEccC--CCCC--eeEec---cC----CCceeEEEccCCe-
Q psy9936 168 A----SLLC-HKAGIQSVAVNHTGTYMATSA-GDSQLRIWDVRN--LEGP--LNTFR---TR----TPINNLAFSQRGL- 229 (315)
Q Consensus 168 ~----~~~~-~~~~i~~~~~sp~g~~l~~~~-~d~~i~iwd~~~--~~~~--~~~~~---~~----~~v~~~~~s~~g~- 229 (315)
. .+.. ....+..++|+|+|++|++++ .++.|.+|++.. + .. ...+. .. ..+..++|+|+|.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~ 244 (343)
T 1ri6_A 166 AQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHG-NIECVQTLDMMPENFSDTRWAADIHITPDGRH 244 (343)
T ss_dssp EEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTS-CCEEEEEEECSCTTCCSCCCEEEEEECTTSSE
T ss_pred eecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCC-cEEEEeeccccCccccccCCccceEECCCCCE
Confidence 2 2222 335788999999999776555 788999999954 3 22 22222 11 1356799999994
Q ss_pred EE-EE-cCCEEEecCC-------------------CceeecccccccccCC-cchhhhh
Q psy9936 230 LA-TS-RGNIVEFLKP-------------------PEINFEPRRKANKAGG-SVQRAKV 266 (315)
Q Consensus 230 ~~-~~-~~~~i~~~~~-------------------~~~~~~~~~~~~~~~~-~~~~~~~ 266 (315)
++ +. .++.|.+|++ ..++|+|+++.++.++ .++.+..
T Consensus 245 l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v 303 (343)
T 1ri6_A 245 LYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISV 303 (343)
T ss_dssp EEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEE
T ss_pred EEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEE
Confidence 33 33 4788887754 5678999998777666 3444333
No 148
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.92 E-value=4.5e-24 Score=186.89 Aligned_cols=194 Identities=13% Similarity=0.133 Sum_probs=152.7
Q ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEccCc-----------e-----EEEEecCCCceeEEEEeecCcEEEE----Ee
Q psy9936 11 FGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRK-----------T-----LACEMNVMEEVYDIKWLHLETMFAV----AQ 70 (315)
Q Consensus 11 ~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~-----------~-----~~~~~~~~~~v~~~~~~~~~~~l~~----~~ 70 (315)
..+..+++++++.++++++.++ +++|+.... . ....+.+...|.+++|+|++++|++ ++
T Consensus 37 ~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs 115 (434)
T 2oit_A 37 ERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSE 115 (434)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETT
T ss_pred CCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccC
Confidence 3578899999999999998887 888875321 1 1123345667999999999999984 43
Q ss_pred -CCeEEEEeCCCC---------E---EEEe-ecCCceEEEEEcCC-CceEEEEcCCCeEEEEEccCCeEEEEeccCCCCe
Q psy9936 71 -KDWVYIYDNQGI---------E---LHCL-KVLNKVTRMEFLPY-HFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKL 135 (315)
Q Consensus 71 -~~~i~i~~~~~~---------~---~~~~-~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v 135 (315)
|+.|++||+... . +..+ .|...|.+++|+|+ +.+|++++.||+|++||++++..+.....|...+
T Consensus 116 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v 195 (434)
T 2oit_A 116 YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAV 195 (434)
T ss_dssp TEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCE
T ss_pred CCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCce
Confidence 789999997321 1 2222 25688999999998 7899999999999999999987776667788899
Q ss_pred EEEEEcCCCCEEEEEcCCCeEEEEcCCCCcceeEeecc-------cccEEEEEECCCCCEEEEe-eCCC------cEEEE
Q psy9936 136 SVMTQNPYNACICLGHRNGTVTMWSPTVQKPLASLLCH-------KAGIQSVAVNHTGTYMATS-AGDS------QLRIW 201 (315)
Q Consensus 136 ~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-------~~~i~~~~~sp~g~~l~~~-~~d~------~i~iw 201 (315)
.+++|+|+|++|++|+.||.|++||++ ++....+..| ...+.+++|++++.++++. +.+| .+++|
T Consensus 196 ~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~ 274 (434)
T 2oit_A 196 TSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMA 274 (434)
T ss_dssp EEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEE
T ss_pred eEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEE
Confidence 999999999999999999999999998 5555555433 2389999999998877553 3443 38999
Q ss_pred EccCC
Q psy9936 202 DVRNL 206 (315)
Q Consensus 202 d~~~~ 206 (315)
++...
T Consensus 275 ~l~~~ 279 (434)
T 2oit_A 275 LLPKK 279 (434)
T ss_dssp ECCCT
T ss_pred EeccC
Confidence 99864
No 149
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.91 E-value=1.3e-23 Score=183.91 Aligned_cols=192 Identities=10% Similarity=0.106 Sum_probs=150.6
Q ss_pred CeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEeCCeEEEEeCCC-----------CEE------EEeecCCceE
Q psy9936 32 GHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQKDWVYIYDNQG-----------IEL------HCLKVLNKVT 94 (315)
Q Consensus 32 g~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~~~-----------~~~------~~~~~~~~v~ 94 (315)
+.+++|+.... + ....++.+++++++.++++++...+.+|+... ..+ ..+.+...|.
T Consensus 23 ~~vri~~~~~~-----~-~~~~~n~lavs~~~~~l~~~~~dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 96 (434)
T 2oit_A 23 KKVRIFDSPEE-----L-PKERSSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIH 96 (434)
T ss_dssp CEEECSCCCSS-----C-CCSCCBCEEEETTTTEEEEEETTEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEE
T ss_pred eeEEecCCccc-----c-CCCCccEEEEecCCCEEEEECCCEEEEEEchHhhhhcccccCcccccccCccccccCCCccc
Confidence 45777764211 1 23458899999999999888855588886410 111 1233446799
Q ss_pred EEEEcCCCceEE----EEcCCCeEEEEEccCC--------e---EEEEeccCCCCeEEEEEcCC-CCEEEEEcCCCeEEE
Q psy9936 95 RMEFLPYHFLLA----TASEEGYLSWLDTSIG--------K---IVSDFSAKKGKLSVMTQNPY-NACICLGHRNGTVTM 158 (315)
Q Consensus 95 ~~~~~~~~~~l~----~~~~d~~i~~~d~~~~--------~---~~~~~~~~~~~v~~~~~~p~-~~~l~~~~~d~~i~i 158 (315)
+++|+|++++|+ +++.|+.|++||+.++ + ....+.+|...|.+++|+|+ +.+|++++.||+|++
T Consensus 97 ~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~i 176 (434)
T 2oit_A 97 HLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAV 176 (434)
T ss_dssp EEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred EEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEE
Confidence 999999999999 7888999999998754 2 24456678999999999998 789999999999999
Q ss_pred EcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccC--------CCceeEEEccCCeE
Q psy9936 159 WSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTR--------TPINNLAFSQRGLL 230 (315)
Q Consensus 159 ~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--------~~v~~~~~s~~g~~ 230 (315)
||++++..+....+|...|.+++|+|+|++|++|+.||.|++||++ + .....+..+ ..+.+++|++++.+
T Consensus 177 wD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~-~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~ 254 (434)
T 2oit_A 177 LQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-L-QEKKVIPCPPFYESDHPVRVLDVLWIGTYVF 254 (434)
T ss_dssp EEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-C-CEEEEECCCTTCCTTSCEEEEEEEEEETTEE
T ss_pred EEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-C-cccccccCCcccCCCCceeEEEEEEecCceE
Confidence 9999987766667789999999999999999999999999999998 4 444444322 15899999999976
Q ss_pred E
Q psy9936 231 A 231 (315)
Q Consensus 231 ~ 231 (315)
+
T Consensus 255 l 255 (434)
T 2oit_A 255 A 255 (434)
T ss_dssp E
T ss_pred E
Confidence 6
No 150
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.91 E-value=7.2e-22 Score=167.97 Aligned_cols=232 Identities=11% Similarity=0.076 Sum_probs=162.2
Q ss_pred CCcEEEEEEcCCCCEEEEEcC---CCeEEEEEccCceE--EEEec-CCCceeEEEEeecCcEEEEEe--CCeEEEEeCC-
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGK---RGHVAAFDWVRKTL--ACEMN-VMEEVYDIKWLHLETMFAVAQ--KDWVYIYDNQ- 80 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~---dg~i~v~~~~~~~~--~~~~~-~~~~v~~~~~~~~~~~l~~~~--~~~i~i~~~~- 80 (315)
...+..++|+|||+ |++++. ++.|++|++.+++. +..+. +...+..++|+|+|++|+++. ++.|.+|++.
T Consensus 39 ~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~ 117 (347)
T 3hfq_A 39 TQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAA 117 (347)
T ss_dssp CSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECT
T ss_pred cCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCC
Confidence 45567799999999 554443 68999999987764 33322 566789999999999887776 6899999984
Q ss_pred CCEEE---EeecC----------CceEEEEEcCCCceEEEEcCCCeEEEEEcc-CCeEE--EEeccC-CCCeEEEEEcCC
Q psy9936 81 GIELH---CLKVL----------NKVTRMEFLPYHFLLATASEEGYLSWLDTS-IGKIV--SDFSAK-KGKLSVMTQNPY 143 (315)
Q Consensus 81 ~~~~~---~~~~~----------~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~-~~~~~--~~~~~~-~~~v~~~~~~p~ 143 (315)
..... .+... ..+.+++|+|+|+++++...++.|.+|++. +++.. ..+..+ ...+..++|+|+
T Consensus 118 ~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spd 197 (347)
T 3hfq_A 118 DGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPD 197 (347)
T ss_dssp TSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTT
T ss_pred CCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCC
Confidence 22222 22221 247889999999977777778899999998 55433 222222 235788999999
Q ss_pred CCEEEE-EcCCCeEEEEcCCC--Ccc--eeEeeccc------ccEEEEEECCCCCEEE-EeeCCCcEEEEEccCCC--CC
Q psy9936 144 NACICL-GHRNGTVTMWSPTV--QKP--LASLLCHK------AGIQSVAVNHTGTYMA-TSAGDSQLRIWDVRNLE--GP 209 (315)
Q Consensus 144 ~~~l~~-~~~d~~i~i~d~~~--~~~--~~~~~~~~------~~i~~~~~sp~g~~l~-~~~~d~~i~iwd~~~~~--~~ 209 (315)
|+++++ +..++.|.+|+++. ++. +..+.... ..+..++|+|||++|+ ++..++.|.+|++.... ..
T Consensus 198 g~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~ 277 (347)
T 3hfq_A 198 GQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTL 277 (347)
T ss_dssp SSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEE
T ss_pred CCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEE
Confidence 996655 56788999999874 432 22332222 4588999999999874 55668999999997321 33
Q ss_pred eeEeccCC-CceeEEEccCCe-E-EEEc-CCEEEecC
Q psy9936 210 LNTFRTRT-PINNLAFSQRGL-L-ATSR-GNIVEFLK 242 (315)
Q Consensus 210 ~~~~~~~~-~v~~~~~s~~g~-~-~~~~-~~~i~~~~ 242 (315)
+..+..+. .+..++|+|||. + +++. ++.+.+|+
T Consensus 278 ~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~ 314 (347)
T 3hfq_A 278 IQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYA 314 (347)
T ss_dssp EEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred eEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEE
Confidence 44444433 588999999995 3 3333 47899884
No 151
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.91 E-value=4.7e-23 Score=199.14 Aligned_cols=226 Identities=14% Similarity=0.160 Sum_probs=181.2
Q ss_pred cEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEecC------------CCceeEEEEe-ecCcEEEEEeCCeEEEEe
Q psy9936 12 GIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMNV------------MEEVYDIKWL-HLETMFAVAQKDWVYIYD 78 (315)
Q Consensus 12 ~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~------------~~~v~~~~~~-~~~~~l~~~~~~~i~i~~ 78 (315)
.+...+|+|||++|+++ .++.|++|++...... .+.. ...+.+++|+ |||+.|+++.++.|++|+
T Consensus 246 ~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~~~~i~~~~ 323 (1045)
T 1k32_A 246 DYYPRHLNTDGRRILFS-KGGSIYIFNPDTEKIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSRGQAFIQD 323 (1045)
T ss_dssp SSCEEEEEESSSCEEEE-ETTEEEEECTTTCCEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEETTEEEEEC
T ss_pred CcceeeEcCCCCEEEEE-eCCEEEEecCCceEee-eeccCcccccccccccccccceeeecCCCCCEEEEEEcCEEEEEc
Confidence 45677999999999887 4889999998555443 4432 2268999999 999999998899999999
Q ss_pred CCCCEEEEee-cCC-ceEEEEEcCCCceEEEEcCCCeEE-EEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCe
Q psy9936 79 NQGIELHCLK-VLN-KVTRMEFLPYHFLLATASEEGYLS-WLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNGT 155 (315)
Q Consensus 79 ~~~~~~~~~~-~~~-~v~~~~~~~~~~~l~~~~~d~~i~-~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~ 155 (315)
..+.....+. +.. .+..++|+ +|+.|++++.++.+. +||+.+++.. .+..|...+..++|+|||++|++++.++.
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~ 401 (1045)
T 1k32_A 324 VSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFE 401 (1045)
T ss_dssp TTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSE
T ss_pred CCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEECCCCe
Confidence 9765554443 445 78999999 999999988888888 9999877654 34477788999999999999999999999
Q ss_pred EEEEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCC----------cEEEEEccCCCCCeeEeccCC-CceeEEE
Q psy9936 156 VTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDS----------QLRIWDVRNLEGPLNTFRTRT-PINNLAF 224 (315)
Q Consensus 156 i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~----------~i~iwd~~~~~~~~~~~~~~~-~v~~~~~ 224 (315)
|++||+.+++....+.+|...+.+++|||||++|++++.++ .|++||+.++ . +..+..+. .+..++|
T Consensus 402 v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g-~-~~~l~~~~~~~~~~~~ 479 (1045)
T 1k32_A 402 IMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGR-K-IFAATTENSHDYAPAF 479 (1045)
T ss_dssp EEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTT-E-EEECSCSSSBEEEEEE
T ss_pred EEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCC-c-EEEeeCCCcccCCceE
Confidence 99999999987777768889999999999999999887654 8999999987 5 44554444 5788999
Q ss_pred ccCCe--EEEEcCCEEEecCC
Q psy9936 225 SQRGL--LATSRGNIVEFLKP 243 (315)
Q Consensus 225 s~~g~--~~~~~~~~i~~~~~ 243 (315)
+|||. ++++.++....|+.
T Consensus 480 spdG~~l~~~s~~~~~~~~~~ 500 (1045)
T 1k32_A 480 DADSKNLYYLSYRSLDPSPDR 500 (1045)
T ss_dssp CTTSCEEEEEESCCCCCEECS
T ss_pred cCCCCEEEEEecccCCcCcch
Confidence 99995 34445555555543
No 152
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.91 E-value=4.8e-22 Score=167.80 Aligned_cols=200 Identities=13% Similarity=0.089 Sum_probs=160.4
Q ss_pred cEEEEEEcCCCCEE-EEEcCCCeEEEEEccCceEEEEecCCC------ceeEEEEeecCcEEEEEe-------------C
Q psy9936 12 GIYRMNYTKNGRHL-LLGGKRGHVAAFDWVRKTLACEMNVME------EVYDIKWLHLETMFAVAQ-------------K 71 (315)
Q Consensus 12 ~v~~~~~s~~~~~l-~~~~~dg~i~v~~~~~~~~~~~~~~~~------~v~~~~~~~~~~~l~~~~-------------~ 71 (315)
.+.+++|+|+|+++ +++..++.|.+||+.+++....+.... .+..++|+|++++++++. +
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 58899999999866 455667899999999998877766433 678899999998888773 6
Q ss_pred CeEEEEeCCCCE-EEEeecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCC------------------
Q psy9936 72 DWVYIYDNQGIE-LHCLKVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKK------------------ 132 (315)
Q Consensus 72 ~~i~i~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~------------------ 132 (315)
+.|.+||+.+.. ...+.....+.+++|+|++++|+++ ++.|.+||+.+++....+..+.
T Consensus 115 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 192 (337)
T 1pby_B 115 TRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQH 192 (337)
T ss_dssp CEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCC
T ss_pred ceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeec
Confidence 899999996544 4445555678889999999988887 5789999998887665443221
Q ss_pred ------------------------------------------------CCeEEEEEcCCCCEEEEEcCCCeEEEEcCCCC
Q psy9936 133 ------------------------------------------------GKLSVMTQNPYNACICLGHRNGTVTMWSPTVQ 164 (315)
Q Consensus 133 ------------------------------------------------~~v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~ 164 (315)
..+.+++|+|+|++++++ ++.|.+||+.++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~ 270 (337)
T 1pby_B 193 ESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKN 270 (337)
T ss_dssp TTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTT
T ss_pred cCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCC
Confidence 124468999999999888 789999999999
Q ss_pred cceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC
Q psy9936 165 KPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT 217 (315)
Q Consensus 165 ~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 217 (315)
+.+..+.. ...+.+++|+|+|++|++++.++.|.+||+.++ +.+..+..+.
T Consensus 271 ~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~-~~~~~~~~~~ 321 (337)
T 1pby_B 271 ASIKRVPL-PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETL-EKKGQVDLPG 321 (337)
T ss_dssp EEEEEEEC-SSCCCEEEECTTSCEEEEESBSSEEEEEETTTC-CEEEEEECGG
T ss_pred cCcceecC-CCceeeEEECCCCCEEEEEcCCCcEEEEECcCC-cEEEEEEcCC
Confidence 88777763 456789999999999999999999999999998 7777776553
No 153
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.91 E-value=1.8e-22 Score=187.46 Aligned_cols=231 Identities=13% Similarity=0.104 Sum_probs=171.1
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccC-----ceEEEEec-CCCc--------------eeEEEEeecCcEEEEE
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVR-----KTLACEMN-VMEE--------------VYDIKWLHLETMFAVA 69 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~-----~~~~~~~~-~~~~--------------v~~~~~~~~~~~l~~~ 69 (315)
...+.+++|||||++|+++ .++.|++|++.+ ++...... +... +.++.|+|||++|+++
T Consensus 120 ~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~ 198 (706)
T 2z3z_A 120 NEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFY 198 (706)
T ss_dssp TTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEE
T ss_pred cccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEE
Confidence 4567889999999999985 678999999998 77655444 2222 4889999999999887
Q ss_pred e----------------------------------CCeEEEEeCCCCEEEEee----cCCceEEEEEcCCCceEEEEcCC
Q psy9936 70 Q----------------------------------KDWVYIYDNQGIELHCLK----VLNKVTRMEFLPYHFLLATASEE 111 (315)
Q Consensus 70 ~----------------------------------~~~i~i~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~d 111 (315)
+ +..|++||+.+.....+. +...+.+++|+|+|+.|++++.+
T Consensus 199 ~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 278 (706)
T 2z3z_A 199 RMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVN 278 (706)
T ss_dssp EEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEEC
T ss_pred EECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeC
Confidence 5 257999999776654433 33678999999999999988766
Q ss_pred C-----eEEEEEccCCeEEEEec--cCCC---CeEEEEEcC--CCCEEEEEcCCCeEEEEcCC-CCcceeEeecccccEE
Q psy9936 112 G-----YLSWLDTSIGKIVSDFS--AKKG---KLSVMTQNP--YNACICLGHRNGTVTMWSPT-VQKPLASLLCHKAGIQ 178 (315)
Q Consensus 112 ~-----~i~~~d~~~~~~~~~~~--~~~~---~v~~~~~~p--~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~~~i~ 178 (315)
+ .|.+||+.+++....+. .+.. .+..++|+| +|+++++++.++.+++|+++ ++..+..+..+...+.
T Consensus 279 ~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~ 358 (706)
T 2z3z_A 279 RAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVT 358 (706)
T ss_dssp TTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEE
T ss_pred CCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEE
Confidence 5 89999999883333322 2222 235689999 99999999999999999876 5666777777777787
Q ss_pred E-EEECCCCCEEEEeeCC-C----cEEEEEccCCCCCeeEeccCCCceeEEEccCCeEE-EE-cC----CEEEecCC
Q psy9936 179 S-VAVNHTGTYMATSAGD-S----QLRIWDVRNLEGPLNTFRTRTPINNLAFSQRGLLA-TS-RG----NIVEFLKP 243 (315)
Q Consensus 179 ~-~~~sp~g~~l~~~~~d-~----~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~~-~~-~~----~~i~~~~~ 243 (315)
. ++|+|+|+.|+.++.+ + .|..||+.++ . ...+.....+.+++|+|||.++ .+ .+ +.+.+|+.
T Consensus 359 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~-~-~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~ 433 (706)
T 2z3z_A 359 NFAGFDPKGTRLYFESTEASPLERHFYCIDIKGG-K-TKDLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNI 433 (706)
T ss_dssp EEEEECTTSSEEEEEESSSCTTCBEEEEEETTCC-C-CEESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEES
T ss_pred eeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCC-C-ceeccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEEC
Confidence 6 7999999988766544 3 5666676665 3 4445445568999999999533 22 22 45777765
No 154
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.90 E-value=4.7e-23 Score=191.86 Aligned_cols=225 Identities=12% Similarity=0.065 Sum_probs=163.9
Q ss_pred EEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEecCCC----ceeEEEEeecCcEEEEEeC----------CeEEEEeC
Q psy9936 14 YRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMNVME----EVYDIKWLHLETMFAVAQK----------DWVYIYDN 79 (315)
Q Consensus 14 ~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~~~----------~~i~i~~~ 79 (315)
.+++|+|||+++++ +.++.|++||+.+++....+.+.. .+.+++|+|||++|+.+++ +.|++||+
T Consensus 19 ~~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 19 FFPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred CccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 37899999965555 469999999999999877776432 3899999999999987753 79999999
Q ss_pred CCCEE---EEeecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEe-ccCCCCe-----------------EEE
Q psy9936 80 QGIEL---HCLKVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDF-SAKKGKL-----------------SVM 138 (315)
Q Consensus 80 ~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~-~~~~~~v-----------------~~~ 138 (315)
.+... ..+ ...+..++|||||+.|+++. ++.|++||+.+++..... .++...+ .++
T Consensus 98 ~~g~~~~~~~l--~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~ 174 (719)
T 1z68_A 98 SNGEFVRGNEL--PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYAL 174 (719)
T ss_dssp TTTEECCSSCC--CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCE
T ss_pred CCCccccceec--CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccE
Confidence 77665 333 25688999999999999886 779999999887765432 2222222 479
Q ss_pred EEcCCCCEEEEEcCCC----------------------------------eEEEEcCCCCcce--------eEeeccccc
Q psy9936 139 TQNPYNACICLGHRNG----------------------------------TVTMWSPTVQKPL--------ASLLCHKAG 176 (315)
Q Consensus 139 ~~~p~~~~l~~~~~d~----------------------------------~i~i~d~~~~~~~--------~~~~~~~~~ 176 (315)
+|+|||++|++++.|. .|.+||+.+++.. ..+.+|...
T Consensus 175 ~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 254 (719)
T 1z68_A 175 WWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYY 254 (719)
T ss_dssp EECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEE
T ss_pred EECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcce
Confidence 9999999999887542 7899999987643 123357788
Q ss_pred EEEEEECCCCCEEEEeeCC----CcEEEEE----ccCCCCCeeEe----ccCC-Cce-----eEEEccCCe--EEE-E-c
Q psy9936 177 IQSVAVNHTGTYMATSAGD----SQLRIWD----VRNLEGPLNTF----RTRT-PIN-----NLAFSQRGL--LAT-S-R 234 (315)
Q Consensus 177 i~~~~~sp~g~~l~~~~~d----~~i~iwd----~~~~~~~~~~~----~~~~-~v~-----~~~~s~~g~--~~~-~-~ 234 (315)
+..++||||++++++.... ..|.+|| +.++ ++...+ ..+. .+. .+.|+|||. +++ + .
T Consensus 255 ~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 333 (719)
T 1z68_A 255 FSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTW-DCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDK 333 (719)
T ss_dssp EEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSE-ECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECT
T ss_pred EEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCC-ceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEcc
Confidence 9999999998877775433 2488899 7766 544444 2333 355 899999994 332 2 3
Q ss_pred CC--EEEecCC
Q psy9936 235 GN--IVEFLKP 243 (315)
Q Consensus 235 ~~--~i~~~~~ 243 (315)
++ .|..|++
T Consensus 334 ~g~~~l~~~~~ 344 (719)
T 1z68_A 334 DGYKHIHYIKD 344 (719)
T ss_dssp TSCEEEEEESS
T ss_pred CCceEEEEEEC
Confidence 34 4555554
No 155
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.90 E-value=1.1e-20 Score=161.66 Aligned_cols=230 Identities=12% Similarity=0.091 Sum_probs=157.7
Q ss_pred CCcEEEEEEcCCCCEEEEEcCC----CeEEEEEccC--ceEEE--Eec-CCCceeEEEEeecCcEEEEEe--CCeEEEEe
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKR----GHVAAFDWVR--KTLAC--EMN-VMEEVYDIKWLHLETMFAVAQ--KDWVYIYD 78 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~d----g~i~v~~~~~--~~~~~--~~~-~~~~v~~~~~~~~~~~l~~~~--~~~i~i~~ 78 (315)
...+..++|+|||++|++++.+ +.|.+|++.. ++... ... +......+++ ++++|+++. ++.|.+|+
T Consensus 49 ~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~ 126 (361)
T 3scy_A 49 VANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFP 126 (361)
T ss_dssp CSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEE
T ss_pred CCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEE
Confidence 3455678999999999988775 7999998765 54332 232 3445667777 787777765 78999999
Q ss_pred CCC-CEEE----Eeec-----------CCceEEEEEcCCCceEEEEc-CCCeEEEEEccCCe-------E------EEEe
Q psy9936 79 NQG-IELH----CLKV-----------LNKVTRMEFLPYHFLLATAS-EEGYLSWLDTSIGK-------I------VSDF 128 (315)
Q Consensus 79 ~~~-~~~~----~~~~-----------~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~-------~------~~~~ 128 (315)
+.. ..+. ...+ ...+.+++|+|+|+++++++ .++.|.+|++.... . ....
T Consensus 127 ~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~ 206 (361)
T 3scy_A 127 IGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFK 206 (361)
T ss_dssp BCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEE
T ss_pred eCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccccccee
Confidence 842 2111 1111 12357899999998665554 57899999987533 1 1112
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEc-CCCeEEEEcCCCCcc--eeEee---cccccEEEEEECCCCCEEEEeeCC--CcEEE
Q psy9936 129 SAKKGKLSVMTQNPYNACICLGH-RNGTVTMWSPTVQKP--LASLL---CHKAGIQSVAVNHTGTYMATSAGD--SQLRI 200 (315)
Q Consensus 129 ~~~~~~v~~~~~~p~~~~l~~~~-~d~~i~i~d~~~~~~--~~~~~---~~~~~i~~~~~sp~g~~l~~~~~d--~~i~i 200 (315)
..+...+..++|+|+|+++++++ .++.|.+||+.+++. +..+. .+...+..++|+|||++|+++..+ +.|.+
T Consensus 207 ~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v 286 (361)
T 3scy_A 207 VAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAI 286 (361)
T ss_dssp CCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEE
T ss_pred cCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEE
Confidence 22345678999999999887766 689999999987643 23232 233456899999999998776654 88999
Q ss_pred EEcc--CCCC--CeeEeccCCCceeEEEccCCe-EEE-E-cCCEEEecC
Q psy9936 201 WDVR--NLEG--PLNTFRTRTPINNLAFSQRGL-LAT-S-RGNIVEFLK 242 (315)
Q Consensus 201 wd~~--~~~~--~~~~~~~~~~v~~~~~s~~g~-~~~-~-~~~~i~~~~ 242 (315)
|++. ++ . .+..+.....+.+++|+|||. +++ + .++.+.+|.
T Consensus 287 ~~~~~~~g-~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~ 334 (361)
T 3scy_A 287 FKVDETNG-TLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFE 334 (361)
T ss_dssp EEECTTTC-CEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEEE
T ss_pred EEEcCCCC-cEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEEEE
Confidence 9996 33 3 334444434688999999995 333 3 367888854
No 156
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.89 E-value=5.1e-21 Score=163.99 Aligned_cols=231 Identities=12% Similarity=0.051 Sum_probs=162.5
Q ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEcc-CceEEEEecC--CCceeEEEEeecCcE--EEEE--------------eC
Q psy9936 11 FGIYRMNYTKNGRHLLLGGKRGHVAAFDWV-RKTLACEMNV--MEEVYDIKWLHLETM--FAVA--------------QK 71 (315)
Q Consensus 11 ~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~-~~~~~~~~~~--~~~v~~~~~~~~~~~--l~~~--------------~~ 71 (315)
..+..++|+|+|++|++++.+ .|.+|++. +++......+ .+.+.+++|+|+|++ ++++ .+
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~ 118 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFA 118 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSC
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCC
Confidence 367789999999999888877 89999997 7776544332 234667899999984 4443 47
Q ss_pred CeEEEEeCC--CCEEEEee-----cCCceEEEEEcCCCceEEEEc-CCCeEEEEEcc-CCeEE--EEec--cCCCCeEEE
Q psy9936 72 DWVYIYDNQ--GIELHCLK-----VLNKVTRMEFLPYHFLLATAS-EEGYLSWLDTS-IGKIV--SDFS--AKKGKLSVM 138 (315)
Q Consensus 72 ~~i~i~~~~--~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~-~~~~~--~~~~--~~~~~v~~~ 138 (315)
+.+.+|++. +.....+. +...+.+++|+|+|++++++. .++.|.+||+. +++.. ..+. .|...+..+
T Consensus 119 g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~ 198 (365)
T 1jof_A 119 GYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWV 198 (365)
T ss_dssp CEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEE
T ss_pred ceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEe
Confidence 889999984 44333332 346789999999999887765 46799999998 67643 2333 235668999
Q ss_pred EEcCCCCEEEEEcC-CCeEEEEcCC--CCcce---eEee-------cccc------cEEEEE-ECCCCCEEEEeeCC-C-
Q psy9936 139 TQNPYNACICLGHR-NGTVTMWSPT--VQKPL---ASLL-------CHKA------GIQSVA-VNHTGTYMATSAGD-S- 196 (315)
Q Consensus 139 ~~~p~~~~l~~~~~-d~~i~i~d~~--~~~~~---~~~~-------~~~~------~i~~~~-~sp~g~~l~~~~~d-~- 196 (315)
+|+|+|+++++++. ++.|.+|+++ +++.. ..+. +|.. .+..++ |+|||++|++++.+ +
T Consensus 199 ~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~ 278 (365)
T 1jof_A 199 AMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKF 278 (365)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESST
T ss_pred EECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCC
Confidence 99999998887764 7899999765 45432 1222 1222 588999 99999988876543 2
Q ss_pred ----cEEEEEcc-CCCCCee---EeccC-CCceeEEEcc---CCeE-EEE-c-CCEEEecCC
Q psy9936 197 ----QLRIWDVR-NLEGPLN---TFRTR-TPINNLAFSQ---RGLL-ATS-R-GNIVEFLKP 243 (315)
Q Consensus 197 ----~i~iwd~~-~~~~~~~---~~~~~-~~v~~~~~s~---~g~~-~~~-~-~~~i~~~~~ 243 (315)
.|.+|++. ++ .... ....+ ..+..++|+| ||.+ +++ . ++.|.+|+.
T Consensus 279 ~~~~~i~v~~~~~~g-~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~ 339 (365)
T 1jof_A 279 ELQGYIAGFKLRDCG-SIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRW 339 (365)
T ss_dssp TSCCEEEEEEECTTS-CEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEE
T ss_pred CCCCeEEEEEECCCC-CEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEE
Confidence 89999996 44 4332 13222 3578899999 7853 333 3 478998874
No 157
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.89 E-value=4.5e-21 Score=162.67 Aligned_cols=199 Identities=11% Similarity=0.069 Sum_probs=155.9
Q ss_pred cEEEEEEcCCCCEEE-EEcCCCeEEEEEccCceEEEEecCCC-------ceeEEEEeecCcEEEEEe-------------
Q psy9936 12 GIYRMNYTKNGRHLL-LGGKRGHVAAFDWVRKTLACEMNVME-------EVYDIKWLHLETMFAVAQ------------- 70 (315)
Q Consensus 12 ~v~~~~~s~~~~~l~-~~~~dg~i~v~~~~~~~~~~~~~~~~-------~v~~~~~~~~~~~l~~~~------------- 70 (315)
.+..++|+|+|++++ ++..++.|.+||+.+++....+.... .+..++|+|+|++++++.
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 123 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK 123 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccC
Confidence 678999999998654 55678999999999998877665322 378899999999888776
Q ss_pred CCeEEEEeCCC----CEEEEeecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCC--------------
Q psy9936 71 KDWVYIYDNQG----IELHCLKVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKK-------------- 132 (315)
Q Consensus 71 ~~~i~i~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-------------- 132 (315)
++.|.+||+.+ ..+....+...+.+++|+|+|+ +++++. .|.+||+.+++.+..+..+.
T Consensus 124 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (349)
T 1jmx_B 124 PPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYF 200 (349)
T ss_dssp CCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCC
T ss_pred CCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceee
Confidence 48999999854 2223444556788999999999 555543 49999999888776654321
Q ss_pred ------------------------------------------------------CCeEEEEEcC-CCCEEEEEcCCCeEE
Q psy9936 133 ------------------------------------------------------GKLSVMTQNP-YNACICLGHRNGTVT 157 (315)
Q Consensus 133 ------------------------------------------------------~~v~~~~~~p-~~~~l~~~~~d~~i~ 157 (315)
..+..++|+| +|++++++ ++.|.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~ 278 (349)
T 1jmx_B 201 WPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLA 278 (349)
T ss_dssp CCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEE
T ss_pred ecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEE
Confidence 1345677889 99998888 88999
Q ss_pred EEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC
Q psy9936 158 MWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT 217 (315)
Q Consensus 158 i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 217 (315)
+||+.+++.+..+.. ...+.+++|+|+|++|++++.++.|.+||+.++ +.+..+..+.
T Consensus 279 ~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~-~~~~~~~~~~ 336 (349)
T 1jmx_B 279 KYDLKQRKLIKAANL-DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTL-EKVKNIKLPG 336 (349)
T ss_dssp EEETTTTEEEEEEEC-SSCCCEEEECSSSSCEEEESBSSEEEEEETTTT-EEEEEEECSS
T ss_pred EEECccCeEEEEEcC-CCCccceEECCCCCEEEEecCCCeEEEEecccc-ceeeeeecCC
Confidence 999999988777763 345678999999998888888999999999988 7777776553
No 158
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.89 E-value=1.8e-19 Score=148.93 Aligned_cols=228 Identities=9% Similarity=0.098 Sum_probs=177.4
Q ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEecC-------CCceeEEEEe-ecCcEEEEEe--CCeEEEEeCC
Q psy9936 11 FGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMNV-------MEEVYDIKWL-HLETMFAVAQ--KDWVYIYDNQ 80 (315)
Q Consensus 11 ~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~-------~~~v~~~~~~-~~~~~l~~~~--~~~i~i~~~~ 80 (315)
..+.+++++|+|.++++...++.|.+||.. ++....+.. ...+..+++. +++.++++.. ++.|.+|+.+
T Consensus 30 ~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~ 108 (286)
T 1q7f_A 30 TEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY 108 (286)
T ss_dssp SCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTT
T ss_pred CCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCC
Confidence 468999999999988888888999999977 555555532 2467899994 6788877774 7899999987
Q ss_pred CCEEEEeec--CCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEec--cCCCCeEEEEEcCCCCEEEEEcCCCeE
Q psy9936 81 GIELHCLKV--LNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFS--AKKGKLSVMTQNPYNACICLGHRNGTV 156 (315)
Q Consensus 81 ~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~--~~~~~v~~~~~~p~~~~l~~~~~d~~i 156 (315)
+..+..+.. ...+.+++++|+|+++++...++.|.+||.. ++.+..+. .+...+..++++|+|+++++...++.|
T Consensus 109 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i 187 (286)
T 1q7f_A 109 GQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCV 187 (286)
T ss_dssp SCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEE
T ss_pred CcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEE
Confidence 777665543 3578999999999988887888999999964 66665553 344568999999999988888889999
Q ss_pred EEEcCCCCcceeEeecc--cccEEEEEECCCCCEEEEeeCCC-cEEEEEccCCCCCeeEeccCC---CceeEEEccCCe-
Q psy9936 157 TMWSPTVQKPLASLLCH--KAGIQSVAVNHTGTYMATSAGDS-QLRIWDVRNLEGPLNTFRTRT---PINNLAFSQRGL- 229 (315)
Q Consensus 157 ~i~d~~~~~~~~~~~~~--~~~i~~~~~sp~g~~l~~~~~d~-~i~iwd~~~~~~~~~~~~~~~---~v~~~~~s~~g~- 229 (315)
.+||.. ++.+..+..+ ...+..++++|+|+++++...++ .|.+||.. + ..+..+..+. .+.+++++|+|.
T Consensus 188 ~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g-~~~~~~~~~~~~~~~~~i~~~~~g~l 264 (286)
T 1q7f_A 188 KVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-G-QLISALESKVKHAQCFDVALMDDGSV 264 (286)
T ss_dssp EEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-S-CEEEEEEESSCCSCEEEEEEETTTEE
T ss_pred EEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-C-CEEEEEcccCCCCcceeEEECCCCcE
Confidence 999985 5556666433 35788999999999888888776 99999964 4 5666665443 367999999995
Q ss_pred EEEEcCCEEEecCC
Q psy9936 230 LATSRGNIVEFLKP 243 (315)
Q Consensus 230 ~~~~~~~~i~~~~~ 243 (315)
++++.++.|++|+.
T Consensus 265 ~vs~~~~~v~v~~~ 278 (286)
T 1q7f_A 265 VLASKDYRLYIYRY 278 (286)
T ss_dssp EEEETTTEEEEEEC
T ss_pred EEECCCCeEEEEEc
Confidence 55566889999975
No 159
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.88 E-value=2.3e-22 Score=187.25 Aligned_cols=214 Identities=9% Similarity=0.018 Sum_probs=155.2
Q ss_pred cEEEEEEcCCCCEEEEEcC---------CCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEeCCeEEEEeCCCC
Q psy9936 12 GIYRMNYTKNGRHLLLGGK---------RGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQKDWVYIYDNQGI 82 (315)
Q Consensus 12 ~v~~~~~s~~~~~l~~~~~---------dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~~~~ 82 (315)
.+.+++|||||++|++++. ++.|++||+.+++..........+..++|+|||+.|+.+.++.|++|++.+.
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g 140 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGD 140 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEETTEEEEESSTTS
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCcccccceECCCCCEEEEEECCeEEEEeCCCC
Confidence 3889999999999998876 6899999999988732122335688999999999999999999999999654
Q ss_pred EEEEeecC---Cce-----------------EEEEEcCCCceEEEEcCCC------------------------------
Q psy9936 83 ELHCLKVL---NKV-----------------TRMEFLPYHFLLATASEEG------------------------------ 112 (315)
Q Consensus 83 ~~~~~~~~---~~v-----------------~~~~~~~~~~~l~~~~~d~------------------------------ 112 (315)
....+... ..+ .+++|+|||+.|++++.|.
T Consensus 141 ~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~ 220 (719)
T 1z68_A 141 PPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAK 220 (719)
T ss_dssp CCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSC
T ss_pred CcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCC
Confidence 43333211 112 4899999999999887542
Q ss_pred ----eEEEEEccCCeEE---E-----EeccCCCCeEEEEEcCCCCEEEEEcCC----CeEEEEc----CCCCcceeEe--
Q psy9936 113 ----YLSWLDTSIGKIV---S-----DFSAKKGKLSVMTQNPYNACICLGHRN----GTVTMWS----PTVQKPLASL-- 170 (315)
Q Consensus 113 ----~i~~~d~~~~~~~---~-----~~~~~~~~v~~~~~~p~~~~l~~~~~d----~~i~i~d----~~~~~~~~~~-- 170 (315)
.|++||+.+++.. . .+..|...+..++|+||++++++.... ..|.+|| +.+++....+
T Consensus 221 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~ 300 (719)
T 1z68_A 221 NPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEH 300 (719)
T ss_dssp CCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEE
T ss_pred CCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEec
Confidence 7889999877642 1 133577789999999998877764322 3588999 8887766555
Q ss_pred --ecccccEE-----EEEECCCCCEEEE--eeCCC--cEEEEEccCCCCCeeEeccC-CCceeEEEccCC
Q psy9936 171 --LCHKAGIQ-----SVAVNHTGTYMAT--SAGDS--QLRIWDVRNLEGPLNTFRTR-TPINNLAFSQRG 228 (315)
Q Consensus 171 --~~~~~~i~-----~~~~sp~g~~l~~--~~~d~--~i~iwd~~~~~~~~~~~~~~-~~v~~~~~s~~g 228 (315)
.+|...+. .+.|+|||+.|+. +..++ .|.+||+.++ . ...+..+ ..+..+.++ ++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~-~-~~~lt~~~~~v~~~~~~-d~ 367 (719)
T 1z68_A 301 IEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVE-N-AIQITSGKWEAINIFRV-TQ 367 (719)
T ss_dssp EEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCST-T-CEECSCSSSCEEEEEEE-CS
T ss_pred ccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCC-c-eEecccCceEEEEEEEE-eC
Confidence 35677676 8899999996554 44555 5777787765 4 3444433 356777766 65
No 160
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.88 E-value=5.7e-20 Score=155.21 Aligned_cols=231 Identities=9% Similarity=0.075 Sum_probs=176.5
Q ss_pred CCcEEEEEEcCCCCEEEEEcCC------------------------CeEEEEEccCceEEEEec--CCCceeEEEEeecC
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKR------------------------GHVAAFDWVRKTLACEMN--VMEEVYDIKWLHLE 63 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~d------------------------g~i~v~~~~~~~~~~~~~--~~~~v~~~~~~~~~ 63 (315)
-..+.+++++|+|+++++...+ +.|.+||..+++....+. +...+..++++|+|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 3568999999999999887766 479999999898876665 33478899999999
Q ss_pred cEEEEEe-CCeEEEEeCCCC--EEEEee----------cCCceEEEEEcC-CCceEEEEc-CCCeEEEEEccCCeEEEEe
Q psy9936 64 TMFAVAQ-KDWVYIYDNQGI--ELHCLK----------VLNKVTRMEFLP-YHFLLATAS-EEGYLSWLDTSIGKIVSDF 128 (315)
Q Consensus 64 ~~l~~~~-~~~i~i~~~~~~--~~~~~~----------~~~~v~~~~~~~-~~~~l~~~~-~d~~i~~~d~~~~~~~~~~ 128 (315)
+++++.. ++.|++|+.++. .+..+. +...+..++++| ++.++++.+ .++.|.+|| .++..+..+
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~ 181 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQW 181 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEe
Confidence 9777765 689999999776 444442 124688999999 788877776 689999999 557777666
Q ss_pred ccC----------CCCeEEEEEcCC-CCEEEEEcCCCeEEEEcCCCCcceeEee--cccccEEEEEECCCCCEEEE----
Q psy9936 129 SAK----------KGKLSVMTQNPY-NACICLGHRNGTVTMWSPTVQKPLASLL--CHKAGIQSVAVNHTGTYMAT---- 191 (315)
Q Consensus 129 ~~~----------~~~v~~~~~~p~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~i~~~~~sp~g~~l~~---- 191 (315)
... -..+..++++|+ +.++++...++.|++||..+++.+..+. .+...+..++|+| +..+++
T Consensus 182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~ 260 (329)
T 3fvz_A 182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKP 260 (329)
T ss_dssp CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCC
T ss_pred ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCE
Confidence 422 233889999998 7777788889999999999888888774 4556788999999 433333
Q ss_pred ---eeCCCcEEEEEccCCCCCeeEecc---C-CCceeEEEccCCeEEEE--cCCEEEecCC
Q psy9936 192 ---SAGDSQLRIWDVRNLEGPLNTFRT---R-TPINNLAFSQRGLLATS--RGNIVEFLKP 243 (315)
Q Consensus 192 ---~~~d~~i~iwd~~~~~~~~~~~~~---~-~~v~~~~~s~~g~~~~~--~~~~i~~~~~ 243 (315)
...+..|++||..++ +.+..+.. + ..+..++++|+|.+.++ .++.|+.|++
T Consensus 261 ~v~~~~~~~v~~~~~~~g-~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~ 320 (329)
T 3fvz_A 261 YFGDQEPVQGFVMNFSSG-EIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTL 320 (329)
T ss_dssp CTTCSCCCCEEEEETTTC-CEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEE
T ss_pred EeccCCCcEEEEEEcCCC-eEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeC
Confidence 334558999999988 77777642 2 24899999999954443 4678887763
No 161
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.87 E-value=1e-19 Score=154.67 Aligned_cols=195 Identities=7% Similarity=0.047 Sum_probs=140.6
Q ss_pred CCcEEEEEEcCCCCEEEEEc-CCCeEEEEEcc-Cce--EEEEecCC----------CceeEEEEeecCcEEEEEe-CCeE
Q psy9936 10 QFGIYRMNYTKNGRHLLLGG-KRGHVAAFDWV-RKT--LACEMNVM----------EEVYDIKWLHLETMFAVAQ-KDWV 74 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~-~dg~i~v~~~~-~~~--~~~~~~~~----------~~v~~~~~~~~~~~l~~~~-~~~i 74 (315)
...+..++|+|||++|++++ .++.|.+|++. ++. .+..+.+. ..+.+++|+|+|+++++.. ++.|
T Consensus 85 ~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v 164 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKV 164 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEE
T ss_pred CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEE
Confidence 45678899999999888877 67899999985 333 33333222 2378899999999555544 6799
Q ss_pred EEEeCC-CCEEEEe---e--cCCceEEEEEcCCCceEEE-EcCCCeEEEEEccC--CeE--EEEeccCC------CCeEE
Q psy9936 75 YIYDNQ-GIELHCL---K--VLNKVTRMEFLPYHFLLAT-ASEEGYLSWLDTSI--GKI--VSDFSAKK------GKLSV 137 (315)
Q Consensus 75 ~i~~~~-~~~~~~~---~--~~~~v~~~~~~~~~~~l~~-~~~d~~i~~~d~~~--~~~--~~~~~~~~------~~v~~ 137 (315)
.+|++. ...+... . ....+..++|+|+|+++++ ...++.|.+|++.. ++. +..+.... ..+..
T Consensus 165 ~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 244 (347)
T 3hfq_A 165 YVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAA 244 (347)
T ss_dssp EEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEE
T ss_pred EEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCccee
Confidence 999986 3333322 1 2246788999999996655 56788999999874 543 22333222 34888
Q ss_pred EEEcCCCCEEE-EEcCCCeEEEEcCCCC---cceeEeecccccEEEEEECCCCCEEEEeeCC-CcEEEEEcc
Q psy9936 138 MTQNPYNACIC-LGHRNGTVTMWSPTVQ---KPLASLLCHKAGIQSVAVNHTGTYMATSAGD-SQLRIWDVR 204 (315)
Q Consensus 138 ~~~~p~~~~l~-~~~~d~~i~i~d~~~~---~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d-~~i~iwd~~ 204 (315)
++|+|+|++|+ +...++.|.+||+... +.+..+..+...+..++|+|+|++|++++.+ +.|.+|++.
T Consensus 245 i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 245 IRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp EEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 99999999774 5556899999998732 4455555566678899999999998888764 889999554
No 162
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.87 E-value=1.4e-20 Score=162.17 Aligned_cols=242 Identities=12% Similarity=0.048 Sum_probs=166.0
Q ss_pred EEEcCCCCEEEEEcC-CC--eEEEEEccCceEEEEecCC-CceeEEEEeecCcEEEEEe-CCeEEEEeCCCCEEEE-eec
Q psy9936 16 MNYTKNGRHLLLGGK-RG--HVAAFDWVRKTLACEMNVM-EEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGIELHC-LKV 89 (315)
Q Consensus 16 ~~~s~~~~~l~~~~~-dg--~i~v~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~~~~~-~~~ 89 (315)
.+|||||++|++++. +| .|.+||+.+++........ ..+..+.|+|||+.|+.+. ++.|++||+.+..... ...
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~ 120 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQV 120 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeec
Confidence 789999999998877 56 4888999999877666533 3445788999999988877 6799999996554433 332
Q ss_pred C-CceEEE--EEcCCCceEEEE----------------------cCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcC-C
Q psy9936 90 L-NKVTRM--EFLPYHFLLATA----------------------SEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNP-Y 143 (315)
Q Consensus 90 ~-~~v~~~--~~~~~~~~l~~~----------------------~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p-~ 143 (315)
. ..+... .++|++..++.. ..+..|.+||+.+++.... ..+...+..++|+| |
T Consensus 121 ~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l-~~~~~~~~~~~~sp~d 199 (388)
T 3pe7_A 121 PAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVI-LQENQWLGHPIYRPYD 199 (388)
T ss_dssp CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEE-EEESSCEEEEEEETTE
T ss_pred hhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEe-ecCCccccccEECCCC
Confidence 2 333333 348999888743 2346799999998865443 34566789999999 9
Q ss_pred CCEEEEEcCC------CeEEEEcCCCCcceeEeeccc--ccEEEEEECCCCCEEEEeeC-CC----cEEEEEccCCCCCe
Q psy9936 144 NACICLGHRN------GTVTMWSPTVQKPLASLLCHK--AGIQSVAVNHTGTYMATSAG-DS----QLRIWDVRNLEGPL 210 (315)
Q Consensus 144 ~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~--~~i~~~~~sp~g~~l~~~~~-d~----~i~iwd~~~~~~~~ 210 (315)
|+.|+.+..+ ..|.++|+..+.. ..+..+. ..+..++|+|||+.|+..+. ++ .|++||+.++ +..
T Consensus 200 g~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g-~~~ 277 (388)
T 3pe7_A 200 DSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETL-ENR 277 (388)
T ss_dssp EEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTC-CEE
T ss_pred CCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCC-ceE
Confidence 9988876653 3788888876543 4444343 35788999999997766443 22 3999999987 432
Q ss_pred e--EeccCC----CceeEEEccCCeEEE-----------EcCCEEEecCC--------------------------Ccee
Q psy9936 211 N--TFRTRT----PINNLAFSQRGLLAT-----------SRGNIVEFLKP--------------------------PEIN 247 (315)
Q Consensus 211 ~--~~~~~~----~v~~~~~s~~g~~~~-----------~~~~~i~~~~~--------------------------~~~~ 247 (315)
. .+.... ....+.|+|||..++ .++..|..|++ ..++
T Consensus 278 ~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 357 (388)
T 3pe7_A 278 QLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPS 357 (388)
T ss_dssp EEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCE
T ss_pred EEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEeccccCcccccccccccCCCCcc
Confidence 2 222210 133458999995322 33556776654 3458
Q ss_pred ecccccccccCCc
Q psy9936 248 FEPRRKANKAGGS 260 (315)
Q Consensus 248 ~~~~~~~~~~~~~ 260 (315)
|+|||+.++..+.
T Consensus 358 ~spDg~~l~~~s~ 370 (388)
T 3pe7_A 358 FTPDDKQILFTSD 370 (388)
T ss_dssp ECTTSSEEEEEEC
T ss_pred CCCCCCEEEEEec
Confidence 9999988876553
No 163
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.87 E-value=3.2e-21 Score=175.28 Aligned_cols=211 Identities=15% Similarity=0.059 Sum_probs=157.6
Q ss_pred CcEEEEEEcCCCCEEEEEcC---CCeEEEEEccC---ceEEEEecCCCceeEEEEeecCc--EEEEEeCCeEEEEeCCCC
Q psy9936 11 FGIYRMNYTKNGRHLLLGGK---RGHVAAFDWVR---KTLACEMNVMEEVYDIKWLHLET--MFAVAQKDWVYIYDNQGI 82 (315)
Q Consensus 11 ~~v~~~~~s~~~~~l~~~~~---dg~i~v~~~~~---~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~~~i~i~~~~~~ 82 (315)
..+..++|||| +.+++++. +....+|.+.. +... .+.....+...+|+|+++ .++++.++.+.+||+.+.
T Consensus 65 ~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g 142 (582)
T 3o4h_A 65 NSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGG 142 (582)
T ss_dssp SEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETT
T ss_pred cccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc-cccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCC
Confidence 47899999999 77776654 44455554322 2222 444344455778999875 444555666679999766
Q ss_pred EEEEeecCCceEEEEEcCCCceEEEEcCC----CeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCC--eE
Q psy9936 83 ELHCLKVLNKVTRMEFLPYHFLLATASEE----GYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNG--TV 156 (315)
Q Consensus 83 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~--~i 156 (315)
....+..... .+++|+|||++|++++.+ +.|++||+.+++.. .+..|.+.+..++|+|||+.|+++..++ .|
T Consensus 143 ~~~~l~~~~~-~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i 220 (582)
T 3o4h_A 143 GLRELARLPG-FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARL 220 (582)
T ss_dssp EEEEEEEESS-CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEE
T ss_pred cEEEeecCCC-ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEE
Confidence 6555443333 889999999999988776 77999999888754 5677888899999999999999888888 89
Q ss_pred EEEcCCCCcceeEeecccccEEEEE--------ECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCCCceeEEEccCC
Q psy9936 157 TMWSPTVQKPLASLLCHKAGIQSVA--------VNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRTPINNLAFSQRG 228 (315)
Q Consensus 157 ~i~d~~~~~~~~~~~~~~~~i~~~~--------~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g 228 (315)
.+||+.+++.. .+..|...+..++ |+|||.++++++.++.+++|++ + +.... ....+.+++|+ +|
T Consensus 221 ~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g-~~~~~--~~~~v~~~~~s-dg 293 (582)
T 3o4h_A 221 VTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--G-ERVEA--PQGNHGRVVLW-RG 293 (582)
T ss_dssp EEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--T-EEECC--CSSEEEEEEEE-TT
T ss_pred EEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--C-Ceecc--CCCceEEEEec-CC
Confidence 99999988776 6667777666667 9999999999999999999999 5 54432 22458899999 88
Q ss_pred eEEE
Q psy9936 229 LLAT 232 (315)
Q Consensus 229 ~~~~ 232 (315)
.+++
T Consensus 294 ~~l~ 297 (582)
T 3o4h_A 294 KLVT 297 (582)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5443
No 164
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.86 E-value=2.8e-20 Score=173.62 Aligned_cols=215 Identities=11% Similarity=0.029 Sum_probs=156.4
Q ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCC-----ceeEEEEeecCcEEEEEeC----------CeE
Q psy9936 11 FGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VME-----EVYDIKWLHLETMFAVAQK----------DWV 74 (315)
Q Consensus 11 ~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~-----~v~~~~~~~~~~~l~~~~~----------~~i 74 (315)
....+++|+|||++++++ ++.|++||+.+++....+. +.. ...++.|||||++|+.+.+ +.+
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence 345689999999988886 8999999999998776665 322 2244889999999988764 678
Q ss_pred EEEeCCCCEEEEee-cCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEE-eccCCCCe-----------------
Q psy9936 75 YIYDNQGIELHCLK-VLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSD-FSAKKGKL----------------- 135 (315)
Q Consensus 75 ~i~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~-~~~~~~~v----------------- 135 (315)
++||+.+.....+. +...+..++|||||+.||.+. ++.|++||+.++...+. ..++...+
T Consensus 95 ~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~ 173 (740)
T 4a5s_A 95 DIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAY 173 (740)
T ss_dssp EEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSS
T ss_pred EEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCC
Confidence 89999877665554 357799999999999999885 67999999988765432 22222222
Q ss_pred EEEEEcCCCCEEEEEcCC------------------------------------CeEEEEcCCC---Cc--ceeEee---
Q psy9936 136 SVMTQNPYNACICLGHRN------------------------------------GTVTMWSPTV---QK--PLASLL--- 171 (315)
Q Consensus 136 ~~~~~~p~~~~l~~~~~d------------------------------------~~i~i~d~~~---~~--~~~~~~--- 171 (315)
..+.|||||+.|+.++.| ..|.+||+.+ ++ ....+.
T Consensus 174 ~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~ 253 (740)
T 4a5s_A 174 SALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPA 253 (740)
T ss_dssp BCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCH
T ss_pred cceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCc
Confidence 348999999999876422 1588899998 73 233343
Q ss_pred ---cccccEEEEEECCCCCEEEEeeC----CCcEEEEEccCCCC----C--eeEe--ccCC-Cc-----eeEEEccCCe
Q psy9936 172 ---CHKAGIQSVAVNHTGTYMATSAG----DSQLRIWDVRNLEG----P--LNTF--RTRT-PI-----NNLAFSQRGL 229 (315)
Q Consensus 172 ---~~~~~i~~~~~sp~g~~l~~~~~----d~~i~iwd~~~~~~----~--~~~~--~~~~-~v-----~~~~~s~~g~ 229 (315)
+|...+..++|+|||++++.... +..|.+||+.++ + + +..+ ..+. .+ ..+.|+|||.
T Consensus 254 ~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg-~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~ 331 (740)
T 4a5s_A 254 SMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDES-SGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGN 331 (740)
T ss_dssp HHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETT-TTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSS
T ss_pred cCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCC-ccccceeEEEEeeeccCCceEccCcCCCceEcCCCC
Confidence 27778999999999997665533 336999999987 5 1 2222 2222 23 3789999995
No 165
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.85 E-value=7.8e-19 Score=150.02 Aligned_cols=212 Identities=9% Similarity=0.086 Sum_probs=144.5
Q ss_pred CCcEEEEEEcCCCCEEEEEc-CCCeEEEEEccCceEEE----EecC-----------CCceeEEEEeecCcEEEEEe--C
Q psy9936 10 QFGIYRMNYTKNGRHLLLGG-KRGHVAAFDWVRKTLAC----EMNV-----------MEEVYDIKWLHLETMFAVAQ--K 71 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~-~dg~i~v~~~~~~~~~~----~~~~-----------~~~v~~~~~~~~~~~l~~~~--~ 71 (315)
...+..+++ ++++|++++ .++.|.+|++.....+. ...+ ...+.+++|+|+|++++++. +
T Consensus 99 ~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 176 (361)
T 3scy_A 99 GADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGT 176 (361)
T ss_dssp SSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTT
T ss_pred CCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCC
Confidence 345667777 788777665 57899999987433221 1111 12357899999999776664 6
Q ss_pred CeEEEEeCC--CC----E---------EEEeecCCceEEEEEcCCCceEEEEc-CCCeEEEEEccCCeE--EEEec---c
Q psy9936 72 DWVYIYDNQ--GI----E---------LHCLKVLNKVTRMEFLPYHFLLATAS-EEGYLSWLDTSIGKI--VSDFS---A 130 (315)
Q Consensus 72 ~~i~i~~~~--~~----~---------~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~~--~~~~~---~ 130 (315)
+.|.+|+++ +. . .........+..++|+|+|+++++++ .++.|.+||+.+++. +..+. .
T Consensus 177 ~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~ 256 (361)
T 3scy_A 177 DQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTV 256 (361)
T ss_dssp TEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSS
T ss_pred CEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCC
Confidence 799999874 21 1 11233346688999999999887776 689999999987754 23232 2
Q ss_pred CCCCeEEEEEcCCCCEEEEEcC--CCeEEEEcCC--CCc--ceeEeecccccEEEEEECCCCCEEEEee-CCCcEEEEEc
Q psy9936 131 KKGKLSVMTQNPYNACICLGHR--NGTVTMWSPT--VQK--PLASLLCHKAGIQSVAVNHTGTYMATSA-GDSQLRIWDV 203 (315)
Q Consensus 131 ~~~~v~~~~~~p~~~~l~~~~~--d~~i~i~d~~--~~~--~~~~~~~~~~~i~~~~~sp~g~~l~~~~-~d~~i~iwd~ 203 (315)
+...+..++|+|||++|++++. ++.|.+|+++ +++ .+..+.. ...+.+++|+|+|++|++++ .++.|.+|++
T Consensus 257 ~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~ 335 (361)
T 3scy_A 257 NAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFER 335 (361)
T ss_dssp CCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred CCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEE
Confidence 3345789999999998877665 4899999986 344 3444443 45678999999999988887 6788999765
Q ss_pred c--CCCCCeeEecc-C-CCceeEEEc
Q psy9936 204 R--NLEGPLNTFRT-R-TPINNLAFS 225 (315)
Q Consensus 204 ~--~~~~~~~~~~~-~-~~v~~~~~s 225 (315)
. ++ +....... + ..+.++.|.
T Consensus 336 d~~~g-~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 336 DQATG-LLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp CTTTC-CEEECSCCEECSSEEEEEEE
T ss_pred ECCCC-cEeecceeeeCCCCeEEEEc
Confidence 4 44 33222211 1 247788875
No 166
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.85 E-value=6.4e-20 Score=171.25 Aligned_cols=208 Identities=8% Similarity=0.055 Sum_probs=149.3
Q ss_pred EEEEEcCCCCEEEEEcCC---------CeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEeCCeEEEEeCCCCEE
Q psy9936 14 YRMNYTKNGRHLLLGGKR---------GHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQKDWVYIYDNQGIEL 84 (315)
Q Consensus 14 ~~~~~s~~~~~l~~~~~d---------g~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~~~~~~ 84 (315)
..++|||||++|++++.+ +.+.+||+.+++......+...+...+|||||+.||.+.++.|++|++.+...
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~ 144 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPS 144 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCC
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCce
Confidence 347899999999988765 56789999999876544567789999999999999999999999999966544
Q ss_pred EEeecC---Cce-----------------EEEEEcCCCceEEEEcCCC--------------------------------
Q psy9936 85 HCLKVL---NKV-----------------TRMEFLPYHFLLATASEEG-------------------------------- 112 (315)
Q Consensus 85 ~~~~~~---~~v-----------------~~~~~~~~~~~l~~~~~d~-------------------------------- 112 (315)
..+... ..+ ..+.|||||+.||.++.|.
T Consensus 145 ~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~ 224 (740)
T 4a5s_A 145 YRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAV 224 (740)
T ss_dssp EECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSC
T ss_pred EEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCc
Confidence 444322 112 3489999999998874221
Q ss_pred ----eEEEEEccC---C---eEEEEec------cCCCCeEEEEEcCCCCEEEEEc----CCCeEEEEcCCCCc----c--
Q psy9936 113 ----YLSWLDTSI---G---KIVSDFS------AKKGKLSVMTQNPYNACICLGH----RNGTVTMWSPTVQK----P-- 166 (315)
Q Consensus 113 ----~i~~~d~~~---~---~~~~~~~------~~~~~v~~~~~~p~~~~l~~~~----~d~~i~i~d~~~~~----~-- 166 (315)
.|++||+.+ + +.. .+. +|...+..++|+|||+.++... .+..|.+||+.+++ +
T Consensus 225 ~~~~~l~v~d~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~ 303 (740)
T 4a5s_A 225 NPTVKFFVVNTDSLSSVTNATSI-QITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLV 303 (740)
T ss_dssp CCEEEEEEEETTSCCSSSCCCEE-EECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECG
T ss_pred CCeeEEEEEECCCCCCCCcceEE-EecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeE
Confidence 488899988 7 333 333 2667789999999999666543 23479999999887 1
Q ss_pred eeEe--ecccccEE-----EEEECCCCCEEE-EeeC-CC--cEEEEEccCCCCCeeEeccCCCceeEE
Q psy9936 167 LASL--LCHKAGIQ-----SVAVNHTGTYMA-TSAG-DS--QLRIWDVRNLEGPLNTFRTRTPINNLA 223 (315)
Q Consensus 167 ~~~~--~~~~~~i~-----~~~~sp~g~~l~-~~~~-d~--~i~iwd~~~~~~~~~~~~~~~~v~~~~ 223 (315)
+..+ ..|...+. .++|+|||+.|+ ..+. +| .|++||+.++ .+.........+..+.
T Consensus 304 ~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~-~~~~lT~g~~~v~~~~ 370 (740)
T 4a5s_A 304 ARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKK-DCTFITKGTWEVIGIE 370 (740)
T ss_dssp GGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCS-SCEESCCSSSCEEEEE
T ss_pred EEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCC-ceEecccCCEEEEEEE
Confidence 2222 34665554 789999999877 6653 34 5888888876 5444333444555543
No 167
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.84 E-value=2.1e-19 Score=155.13 Aligned_cols=243 Identities=12% Similarity=0.059 Sum_probs=164.7
Q ss_pred EEEEEEcCCCCEEEEEcCC---CeEEEEEccCceEEEEecCCCcee-EEEEeecCcEEEEEe-CCeEEEEeCCCCEEEEe
Q psy9936 13 IYRMNYTKNGRHLLLGGKR---GHVAAFDWVRKTLACEMNVMEEVY-DIKWLHLETMFAVAQ-KDWVYIYDNQGIELHCL 87 (315)
Q Consensus 13 v~~~~~s~~~~~l~~~~~d---g~i~v~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~-~~~i~i~~~~~~~~~~~ 87 (315)
+..++|||||++|+..... ..|.+|++.+++......+..... .+.|+|||+.|+.+. ++.|++|++.+.....+
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~ 117 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVI 117 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEE
Confidence 5678899999998876443 478899999888665544444433 488999999887766 67899999976544443
Q ss_pred ec-CCc-eEE-------------------EEEcCCCceEEEE-----cCCCeEEEEEccCCeEEEEeccCCCCeEEEEEc
Q psy9936 88 KV-LNK-VTR-------------------MEFLPYHFLLATA-----SEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQN 141 (315)
Q Consensus 88 ~~-~~~-v~~-------------------~~~~~~~~~l~~~-----~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~ 141 (315)
.. ... ... +.|+|+++.++.. ..+..|.+||+.+++..... .+...+..+.|+
T Consensus 118 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~s 196 (396)
T 3c5m_A 118 YTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYR 196 (396)
T ss_dssp EECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEE
T ss_pred EecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceEC
Confidence 32 221 111 3467777766554 35667999999988765544 456678999999
Q ss_pred C-CCCEEEEEcCC------CeEEEEcCCCCcceeEeecc--cccEEEEEECCCCCEEEEeeCC-----CcEEEEEccCCC
Q psy9936 142 P-YNACICLGHRN------GTVTMWSPTVQKPLASLLCH--KAGIQSVAVNHTGTYMATSAGD-----SQLRIWDVRNLE 207 (315)
Q Consensus 142 p-~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~--~~~i~~~~~sp~g~~l~~~~~d-----~~i~iwd~~~~~ 207 (315)
| ++..|+..+.+ ..|.+||+.+++.. .+..+ ...+..++|+|+|++|+.++.+ +.|++||+.++
T Consensus 197 p~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g- 274 (396)
T 3c5m_A 197 PFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETL- 274 (396)
T ss_dssp TTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTC-
T ss_pred CCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCC-
Confidence 9 78877665443 46889998765433 33323 2357889999999988777544 44999999886
Q ss_pred CCeeEeccCCCceeEEEcc-CCeEEEE------------------cCCEEEecCC-----------C-------------
Q psy9936 208 GPLNTFRTRTPINNLAFSQ-RGLLATS------------------RGNIVEFLKP-----------P------------- 244 (315)
Q Consensus 208 ~~~~~~~~~~~v~~~~~s~-~g~~~~~------------------~~~~i~~~~~-----------~------------- 244 (315)
......... ... +.|+| ||.+++. ++..|..|++ .
T Consensus 275 ~~~~l~~~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~ 352 (396)
T 3c5m_A 275 ENEEVMVMP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQIT 352 (396)
T ss_dssp CEEEEEECC-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTT
T ss_pred CeEEeeeCC-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCC
Confidence 443322222 233 89999 9964443 2367777764 1
Q ss_pred --ceeecccccccccCCc
Q psy9936 245 --EINFEPRRKANKAGGS 260 (315)
Q Consensus 245 --~~~~~~~~~~~~~~~~ 260 (315)
.+.|+|+++.++..+.
T Consensus 353 ~~~~~~s~dg~~l~~~s~ 370 (396)
T 3c5m_A 353 HPHPSFTPNDDGVLFTSD 370 (396)
T ss_dssp CCCCEECTTSSEEEEEEC
T ss_pred CCCceEccCCCeEEEEec
Confidence 2578899988776654
No 168
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.84 E-value=1.8e-18 Score=148.12 Aligned_cols=237 Identities=14% Similarity=0.097 Sum_probs=158.3
Q ss_pred EEEEEcCC--CeEEEEEc--cCceEEEE--ec--CCCceeEEEEeecCcEEEEEeCCeEEEEeCC-CCEEE-EeecC--C
Q psy9936 24 HLLLGGKR--GHVAAFDW--VRKTLACE--MN--VMEEVYDIKWLHLETMFAVAQKDWVYIYDNQ-GIELH-CLKVL--N 91 (315)
Q Consensus 24 ~l~~~~~d--g~i~v~~~--~~~~~~~~--~~--~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~~-~~~~~-~~~~~--~ 91 (315)
++++|+.. +.|.+|++ .++++... .. ....+..++|+|++++|++++.+.|.+|++. ...+. ...+. +
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~~v~~~~~~~~g~~~~~~~~~~~g 83 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHPIGG 83 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEECCS
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccceEEEEEECCCCCEEEeeEeecCC
Confidence 35555543 56887765 46654322 21 2346889999999998887775599999984 43332 22221 3
Q ss_pred ceEEEEEcCCCce--EEEEc-------------CCCeEEEEEcc-CCeEEEEec----cCCCCeEEEEEcCCCCEEEEEc
Q psy9936 92 KVTRMEFLPYHFL--LATAS-------------EEGYLSWLDTS-IGKIVSDFS----AKKGKLSVMTQNPYNACICLGH 151 (315)
Q Consensus 92 ~v~~~~~~~~~~~--l~~~~-------------~d~~i~~~d~~-~~~~~~~~~----~~~~~v~~~~~~p~~~~l~~~~ 151 (315)
.+.+++|+|+|++ +++++ .++.+.+|++. +++....+. .+...+.+++|+|+|++|++++
T Consensus 84 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 163 (365)
T 1jof_A 84 HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSAD 163 (365)
T ss_dssp SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred CCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEc
Confidence 4566899999984 45553 68899999997 465544333 2456789999999999888765
Q ss_pred -CCCeEEEEcCC-CCcce--eEee--cccccEEEEEECCCCCEEEEeeC-CCcEEEEEcc--CCCCCe---eEec---c-
Q psy9936 152 -RNGTVTMWSPT-VQKPL--ASLL--CHKAGIQSVAVNHTGTYMATSAG-DSQLRIWDVR--NLEGPL---NTFR---T- 215 (315)
Q Consensus 152 -~d~~i~i~d~~-~~~~~--~~~~--~~~~~i~~~~~sp~g~~l~~~~~-d~~i~iwd~~--~~~~~~---~~~~---~- 215 (315)
.++.|.+||+. +++.. ..+. .|...+..++|+|+|++|++++. ++.|.+|++. ++ ... ..+. .
T Consensus 164 ~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g-~~~~~~~~~~~~~~~ 242 (365)
T 1jof_A 164 LTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATH-MPVYTHHSFPLIPPG 242 (365)
T ss_dssp TTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTC-CEEEEEEEEESSCTT
T ss_pred CCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCC-cEEEccceEEcCCCC
Confidence 36799999998 66542 2333 23567899999999999888775 6889999875 34 332 1221 1
Q ss_pred ---CC-------CceeEE-EccCCeE--EEEc-CC-----EEEecCC--------------------Cceeecc---ccc
Q psy9936 216 ---RT-------PINNLA-FSQRGLL--ATSR-GN-----IVEFLKP--------------------PEINFEP---RRK 253 (315)
Q Consensus 216 ---~~-------~v~~~~-~s~~g~~--~~~~-~~-----~i~~~~~--------------------~~~~~~~---~~~ 253 (315)
+. .+..++ |+|||.+ ++.. ++ .|.+|++ ..++|+| +++
T Consensus 243 ~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~ 322 (365)
T 1jof_A 243 IPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDE 322 (365)
T ss_dssp CCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTT
T ss_pred cCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCC
Confidence 12 377899 9999953 2322 23 6776632 3455678 788
Q ss_pred ccccCCcc
Q psy9936 254 ANKAGGSV 261 (315)
Q Consensus 254 ~~~~~~~~ 261 (315)
+++.++.+
T Consensus 323 ~l~v~~~~ 330 (365)
T 1jof_A 323 WMAITDDQ 330 (365)
T ss_dssp EEEEECSS
T ss_pred EEEEEEcC
Confidence 88777654
No 169
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.83 E-value=2.9e-18 Score=145.48 Aligned_cols=211 Identities=8% Similarity=0.066 Sum_probs=149.0
Q ss_pred cEEEEEEcCCCCEEEEEcCC---C--eEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEe-C--------------
Q psy9936 12 GIYRMNYTKNGRHLLLGGKR---G--HVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQ-K-------------- 71 (315)
Q Consensus 12 ~v~~~~~s~~~~~l~~~~~d---g--~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~-------------- 71 (315)
.+..++|||||++|++.+.+ + .|++|++.+++......... +..+.|+|||+.|+.+. +
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~ 138 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVP 138 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CC
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccc
Confidence 46778999999999887643 2 48888998888766665445 99999999999887764 2
Q ss_pred -------------CeEEEEeCCCCEE-EEeecCCceEEEEEcCCCceEEEEcCCC-------eEEEEEccCCeEEEEecc
Q psy9936 72 -------------DWVYIYDNQGIEL-HCLKVLNKVTRMEFLPYHFLLATASEEG-------YLSWLDTSIGKIVSDFSA 130 (315)
Q Consensus 72 -------------~~i~i~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~-------~i~~~d~~~~~~~~~~~~ 130 (315)
..|++|++.+... ..+... .+..+.|+|+| +++++..++ ...+|.+.+++.. .+..
T Consensus 139 ~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~l~~ 215 (347)
T 2gop_A 139 AWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEE-KMFE 215 (347)
T ss_dssp CC---------CEEEEEEEETTTTEEEEEEEEE-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEE-EEEE
T ss_pred eeecCcccccCccceEEEEECCCCeEEeeecCC-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCceE-Eecc
Confidence 4689999976655 444443 78899999999 777775432 3344444455443 3333
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCC--------CeEEEEcCCCCcceeEeecccccEEE-EEECCCCCEEEEeeCCCcEEEE
Q psy9936 131 KKGKLSVMTQNPYNACICLGHRN--------GTVTMWSPTVQKPLASLLCHKAGIQS-VAVNHTGTYMATSAGDSQLRIW 201 (315)
Q Consensus 131 ~~~~v~~~~~~p~~~~l~~~~~d--------~~i~i~d~~~~~~~~~~~~~~~~i~~-~~~sp~g~~l~~~~~d~~i~iw 201 (315)
+ ..+..+ +|+|++|+.++.+ ..|.+|| +++.......+...+.. +.|+ +| ++++++.++.++||
T Consensus 216 ~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~ 288 (347)
T 2gop_A 216 K-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY 288 (347)
T ss_dssp E-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE
T ss_pred C-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE
Confidence 4 445444 9999988776643 4788888 55544444456678886 9999 88 88999999999999
Q ss_pred EccCCCCCeeEeccCCCceeEEEccCCeEEE-EcCC
Q psy9936 202 DVRNLEGPLNTFRTRTPINNLAFSQRGLLAT-SRGN 236 (315)
Q Consensus 202 d~~~~~~~~~~~~~~~~v~~~~~s~~g~~~~-~~~~ 236 (315)
+.++ ...........+.+++|+| ..+++ +.++
T Consensus 289 -~~~g-~~~~~~~~~~~v~~~~~s~-~~~~~~~~~~ 321 (347)
T 2gop_A 289 -IWDG-EIKPIAKGRHWIMGFDVDE-IVVYLKETAT 321 (347)
T ss_dssp -EESS-SEEEEECSSSEEEEEEESS-SEEEEEECSS
T ss_pred -EcCC-ceEEEecCCCeEEeeeeeC-cEEEEEcCCC
Confidence 8854 5544444444689999999 75443 3344
No 170
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.82 E-value=1.8e-17 Score=137.63 Aligned_cols=225 Identities=11% Similarity=0.028 Sum_probs=161.9
Q ss_pred CCcEEEEEEcCCCC-EEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCCCCEEEE
Q psy9936 10 QFGIYRMNYTKNGR-HLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGIELHC 86 (315)
Q Consensus 10 ~~~v~~~~~s~~~~-~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~~~~~ 86 (315)
.....+++|+|+|+ +++++..++.|..|+..++ ...+. +...+.+++++|+|+++++.. ++.|.+||........
T Consensus 27 ~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~ 104 (296)
T 3e5z_A 27 FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWES 104 (296)
T ss_dssp CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEE
T ss_pred CccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEE
Confidence 45578999999998 7778888899999999887 33443 566789999999999887776 5799999994333333
Q ss_pred e-ec-----CCceEEEEEcCCCceEEE----Ec-------------CCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCC
Q psy9936 87 L-KV-----LNKVTRMEFLPYHFLLAT----AS-------------EEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPY 143 (315)
Q Consensus 87 ~-~~-----~~~v~~~~~~~~~~~l~~----~~-------------~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~ 143 (315)
+ .. ...+..++++|+|+++++ ++ ..+.|..++.. ++. ..+..+......++|+|+
T Consensus 105 ~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~~~~~~gi~~s~d 182 (296)
T 3e5z_A 105 IADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRDRVKPNGLAFLPS 182 (296)
T ss_dssp EECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECCCSSEEEEEECTT
T ss_pred EeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeecCCCCCccEEECCC
Confidence 2 21 135678999999998887 33 13466666655 443 334455667899999999
Q ss_pred CCEEEEEcCCCeEEEEcCC-CCcc---eeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCCCc
Q psy9936 144 NACICLGHRNGTVTMWSPT-VQKP---LASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRTPI 219 (315)
Q Consensus 144 ~~~l~~~~~d~~i~i~d~~-~~~~---~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v 219 (315)
|+.+++.+.++.|.+||+. +++. ...+..+...+.+++++++|+++++. ++.|.+||.. + +.+..+..+..+
T Consensus 183 g~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g-~~~~~~~~~~~~ 258 (296)
T 3e5z_A 183 GNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-G-DELGRVLTPQTT 258 (296)
T ss_dssp SCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-S-CEEEEEECSSCC
T ss_pred CCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-C-CEEEEEECCCCc
Confidence 9988777888999999987 4443 22333345566789999999976666 7889999987 4 677777766558
Q ss_pred eeEEE-ccCCe-EEEEcCCEEEecC
Q psy9936 220 NNLAF-SQRGL-LATSRGNIVEFLK 242 (315)
Q Consensus 220 ~~~~~-s~~g~-~~~~~~~~i~~~~ 242 (315)
.+++| +|++. +.++..+.+..++
T Consensus 259 ~~~~f~~~d~~~L~v~t~~~l~~~~ 283 (296)
T 3e5z_A 259 SNLCFGGPEGRTLYMTVSTEFWSIE 283 (296)
T ss_dssp CEEEEESTTSCEEEEEETTEEEEEE
T ss_pred eeEEEECCCCCEEEEEcCCeEEEEE
Confidence 99999 57873 4444444444333
No 171
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.82 E-value=1.5e-18 Score=149.44 Aligned_cols=213 Identities=9% Similarity=-0.026 Sum_probs=145.7
Q ss_pred EEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEecC-CCceeEEE--EeecCcEEEEE---------------------
Q psy9936 14 YRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMNV-MEEVYDIK--WLHLETMFAVA--------------------- 69 (315)
Q Consensus 14 ~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~-~~~v~~~~--~~~~~~~l~~~--------------------- 69 (315)
..++|+|||+.|++++.++.|++||+.+++....+.. ...+.... ++|++.+++..
T Consensus 84 ~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~ 163 (388)
T 3pe7_A 84 FGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYF 163 (388)
T ss_dssp SSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGG
T ss_pred cceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhc
Confidence 3568999999999999889999999999987766653 33343333 47899888743
Q ss_pred --eCCeEEEEeCCCCEEEEe-ecCCceEEEEEcC-CCceEEEEcCC------CeEEEEEccCCeEEEEeccCC--CCeEE
Q psy9936 70 --QKDWVYIYDNQGIELHCL-KVLNKVTRMEFLP-YHFLLATASEE------GYLSWLDTSIGKIVSDFSAKK--GKLSV 137 (315)
Q Consensus 70 --~~~~i~i~~~~~~~~~~~-~~~~~v~~~~~~~-~~~~l~~~~~d------~~i~~~d~~~~~~~~~~~~~~--~~v~~ 137 (315)
.+..|++||+.+.....+ .+...+..+.|+| +|+.|+....+ ..|.++|+..+.. ..+..+. ..+..
T Consensus 164 ~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~ 242 (388)
T 3pe7_A 164 TKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTH 242 (388)
T ss_dssp GCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEE
T ss_pred cCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCccccc
Confidence 135799999965554444 4557789999999 99988877653 3688888775543 3444443 24778
Q ss_pred EEEcCCCCEEEEEcC-C----CeEEEEcCCCCcce--eEeeccccc---EEEEEECCCCCEEEEe---------eCCCcE
Q psy9936 138 MTQNPYNACICLGHR-N----GTVTMWSPTVQKPL--ASLLCHKAG---IQSVAVNHTGTYMATS---------AGDSQL 198 (315)
Q Consensus 138 ~~~~p~~~~l~~~~~-d----~~i~i~d~~~~~~~--~~~~~~~~~---i~~~~~sp~g~~l~~~---------~~d~~i 198 (315)
++|+|||+.|+..+. + ..|.+||+.+++.. ..+.++... ...+.|+|||++|+.. ..+..|
T Consensus 243 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i 322 (388)
T 3pe7_A 243 EFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFL 322 (388)
T ss_dssp EEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEE
T ss_pred ceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEE
Confidence 899999997765432 2 24999999988642 233221111 1123799999988754 445689
Q ss_pred EEEEccCCCCCeeEeccCC------------CceeEEEccCCe
Q psy9936 199 RIWDVRNLEGPLNTFRTRT------------PINNLAFSQRGL 229 (315)
Q Consensus 199 ~iwd~~~~~~~~~~~~~~~------------~v~~~~~s~~g~ 229 (315)
++||+.++ .. ..+..+. .+.+++|+|||.
T Consensus 323 ~~~d~~~~-~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~ 363 (388)
T 3pe7_A 323 YVFNMKNG-TQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDK 363 (388)
T ss_dssp EEEETTTT-EE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSS
T ss_pred EEEeccCC-ce-EEeccccCcccccccccccCCCCccCCCCCC
Confidence 99999886 44 3333332 378899999994
No 172
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.81 E-value=3.6e-17 Score=133.80 Aligned_cols=231 Identities=10% Similarity=-0.039 Sum_probs=164.8
Q ss_pred cEEEEEEcCCCCEEE-EEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEeCCeEEEEeCCCCEEEEee-
Q psy9936 12 GIYRMNYTKNGRHLL-LGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQKDWVYIYDNQGIELHCLK- 88 (315)
Q Consensus 12 ~v~~~~~s~~~~~l~-~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~~~~~~~~~~- 88 (315)
.+.+++++|+|++++ +...++.|.+|+..+........ ....+.++++.++++++++..++.|.+|+..+.....+.
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~ 104 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPF 104 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECCC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcCCCEEEEEeCCCceEeeeec
Confidence 788999999998777 54677899999976654332211 335678899999998777666789999999776554443
Q ss_pred -cCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCeEEEEcCCCCcce
Q psy9936 89 -VLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNGTVTMWSPTVQKPL 167 (315)
Q Consensus 89 -~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~~ 167 (315)
....+..++++|+|.++++...++.|.+|+..+.............+..++++|+|+++++...++.|.+||.......
T Consensus 105 ~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~ 184 (270)
T 1rwi_B 105 DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQV 184 (270)
T ss_dssp CSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEE
T ss_pred CCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceE
Confidence 2367899999999988777777889999986554433222223345788999999997777777889999998876543
Q ss_pred eEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccC-CCceeEEEccCCeE-EEE-cCCEEEecCC
Q psy9936 168 ASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTR-TPINNLAFSQRGLL-ATS-RGNIVEFLKP 243 (315)
Q Consensus 168 ~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~v~~~~~s~~g~~-~~~-~~~~i~~~~~ 243 (315)
.....+...+.+++++|+|.++++...++.|.+|+..+. ........+ ..+.+++++|+|.+ ++. .++.|+.++.
T Consensus 185 ~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~-~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~ 262 (270)
T 1rwi_B 185 VLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST-TSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTS 262 (270)
T ss_dssp ECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCS-CCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECC
T ss_pred eecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCC-cceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcC
Confidence 332233367889999999987777777889999998764 332222122 35899999999953 443 4788888764
No 173
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.81 E-value=1.4e-17 Score=142.31 Aligned_cols=211 Identities=12% Similarity=0.108 Sum_probs=141.8
Q ss_pred EEEEcCCCCEEEEEc----------CCCeEEEEEccCceEEEEecC-------CCceeEEEEeecCcEEEEEe---CCeE
Q psy9936 15 RMNYTKNGRHLLLGG----------KRGHVAAFDWVRKTLACEMNV-------MEEVYDIKWLHLETMFAVAQ---KDWV 74 (315)
Q Consensus 15 ~~~~s~~~~~l~~~~----------~dg~i~v~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~---~~~i 74 (315)
.++|+|||++++++. .++.|.+||..+++....+.. ......++++|||++|+++. ++.|
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v 133 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSI 133 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeE
Confidence 899999999998875 256799999999888877652 23467899999999998875 4789
Q ss_pred EEEeCCCCEE-EE-eecCCceEEEEEcCCC-ceEEEEcCCCeEEE-----------------------------------
Q psy9936 75 YIYDNQGIEL-HC-LKVLNKVTRMEFLPYH-FLLATASEEGYLSW----------------------------------- 116 (315)
Q Consensus 75 ~i~~~~~~~~-~~-~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~----------------------------------- 116 (315)
.+||+....+ .. +... ....+.+.|++ ..+++.+.||.+.+
T Consensus 134 ~v~d~~~~~~~~~~i~~~-~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 212 (361)
T 2oiz_A 134 GIVDVAKGDYVEDVTAAA-GCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKD 212 (361)
T ss_dssp EEEETTTTEEEEEEGGGT-TEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSS
T ss_pred EEEECCCCcEEEEEecCC-CcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCC
Confidence 9999965443 33 3222 11223334432 23333334444444
Q ss_pred -------------EEccCCe--EEEEecc------C----CCCeEEEEEcCCCCEEEEEcC-----------CCeEEEEc
Q psy9936 117 -------------LDTSIGK--IVSDFSA------K----KGKLSVMTQNPYNACICLGHR-----------NGTVTMWS 160 (315)
Q Consensus 117 -------------~d~~~~~--~~~~~~~------~----~~~v~~~~~~p~~~~l~~~~~-----------d~~i~i~d 160 (315)
+|+.... ....+.. + ......++|+|+++.++++.. .+.|.+||
T Consensus 213 ~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD 292 (361)
T 2oiz_A 213 KAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMD 292 (361)
T ss_dssp EEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEE
T ss_pred EEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEE
Confidence 4433221 1111100 0 001112688999887776543 35899999
Q ss_pred CCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCC-CCeeEe-ccCCCceeEEEccCCe
Q psy9936 161 PTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLE-GPLNTF-RTRTPINNLAFSQRGL 229 (315)
Q Consensus 161 ~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~-~~~~~~-~~~~~v~~~~~s~~g~ 229 (315)
+.+++.+.++..+. +.+++|+|||++|++++. +.|.+||..++. +.+..+ ........++++|+|.
T Consensus 293 ~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 293 TKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp TTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred CCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 99999999998766 899999999999998887 999999998851 334454 3344678999999984
No 174
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.81 E-value=3.6e-18 Score=157.45 Aligned_cols=230 Identities=10% Similarity=-0.007 Sum_probs=160.3
Q ss_pred CCcEEEEEEcCCCCEEEEE--cCCCeEEEEEcc-CceEEEEecCCCcee---------EEEEe--ecCcE-EEEEeC--C
Q psy9936 10 QFGIYRMNYTKNGRHLLLG--GKRGHVAAFDWV-RKTLACEMNVMEEVY---------DIKWL--HLETM-FAVAQK--D 72 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~--~~dg~i~v~~~~-~~~~~~~~~~~~~v~---------~~~~~--~~~~~-l~~~~~--~ 72 (315)
...+..++|++++-+++.. +.++...||... ++.......+...+. ...|+ |||+. |+.+.+ .
T Consensus 23 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~ 102 (662)
T 3azo_A 23 SGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQ 102 (662)
T ss_dssp CSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTC
T ss_pred CCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCC
Confidence 4678899999887677766 557888999853 444333333544555 56676 99988 887764 5
Q ss_pred eEEEEeCC--C-CEEEEeec------CCceEEEEEcCCCceEEEEcCC----------CeEEEEEccC------CeEEEE
Q psy9936 73 WVYIYDNQ--G-IELHCLKV------LNKVTRMEFLPYHFLLATASEE----------GYLSWLDTSI------GKIVSD 127 (315)
Q Consensus 73 ~i~i~~~~--~-~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~d----------~~i~~~d~~~------~~~~~~ 127 (315)
.|+++++. + .....+.. ...+..++|+|||+.|++++.+ ..|++||+.+ +.. ..
T Consensus 103 ~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~ 181 (662)
T 3azo_A 103 RLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RE 181 (662)
T ss_dssp CEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EE
T ss_pred eEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eE
Confidence 78888877 3 44444433 3567899999999999988876 5799999987 544 44
Q ss_pred ec-cCCCCeEEEEEcCCCCEEEEEcCC--------CeEEEEcCC-CC---cceeEeecccccEEEEEECCCCCEEEEeeC
Q psy9936 128 FS-AKKGKLSVMTQNPYNACICLGHRN--------GTVTMWSPT-VQ---KPLASLLCHKAGIQSVAVNHTGTYMATSAG 194 (315)
Q Consensus 128 ~~-~~~~~v~~~~~~p~~~~l~~~~~d--------~~i~i~d~~-~~---~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~ 194 (315)
+. .+...+..++|+|||++|+.++.+ ..|.+||+. ++ +.......|...+..++|+|||+++++++.
T Consensus 182 l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~ 261 (662)
T 3azo_A 182 LSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDR 261 (662)
T ss_dssp SSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECT
T ss_pred EEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECC
Confidence 55 555677889999999999877654 489999998 56 333333445788999999999998888888
Q ss_pred CC--cEEEEEccCCCCCeeEeccCCC---------ceeEEEccCCeEEEEc-CCEEEec
Q psy9936 195 DS--QLRIWDVRNLEGPLNTFRTRTP---------INNLAFSQRGLLATSR-GNIVEFL 241 (315)
Q Consensus 195 d~--~i~iwd~~~~~~~~~~~~~~~~---------v~~~~~s~~g~~~~~~-~~~i~~~ 241 (315)
++ .|.+||+.++ +.......+.. +..++|+|++.++++. .+.+++|
T Consensus 262 ~~~~~l~~~~~~~~-~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~ 319 (662)
T 3azo_A 262 TGWWNLHRVDPATG-AATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLG 319 (662)
T ss_dssp TSSCEEEEECTTTC-CEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEE
T ss_pred CCCeEEEEEECCCC-ceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEE
Confidence 88 5666666555 43333332221 4678899988544332 2555555
No 175
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.80 E-value=2.2e-16 Score=133.23 Aligned_cols=222 Identities=10% Similarity=0.104 Sum_probs=161.9
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEe-cCCCceeEEEEeecCcEEEEEeC-----CeEEEEeCCCCE
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEM-NVMEEVYDIKWLHLETMFAVAQK-----DWVYIYDNQGIE 83 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-----~~i~i~~~~~~~ 83 (315)
...+.+++|+|+|++++++..++.|.+||..+++..... .+...+.+++|+|++++++++.. +.|.+||.++..
T Consensus 44 ~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~ 123 (333)
T 2dg1_A 44 GLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDN 123 (333)
T ss_dssp CCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCS
T ss_pred CccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCE
Confidence 456789999999998888888899999999888766554 35678999999999998887764 489999987655
Q ss_pred EE-Eee---cCCceEEEEEcCCCceEEEEcC------CCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEE-EEcC
Q psy9936 84 LH-CLK---VLNKVTRMEFLPYHFLLATASE------EGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACIC-LGHR 152 (315)
Q Consensus 84 ~~-~~~---~~~~v~~~~~~~~~~~l~~~~~------d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~-~~~~ 152 (315)
.. .+. ....+.+++++|+|.++++... .+.|..+|..+++.... ..+...+..++|+|+|+.|+ +...
T Consensus 124 ~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~i~~~~dg~~l~v~~~~ 202 (333)
T 2dg1_A 124 LQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI-IQNISVANGIALSTDEKVLWVTETT 202 (333)
T ss_dssp CEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE-EEEESSEEEEEECTTSSEEEEEEGG
T ss_pred EEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe-ecCCCcccceEECCCCCEEEEEeCC
Confidence 43 222 2356899999999987776653 35677777665544332 22334578899999998654 4456
Q ss_pred CCeEEEEcCCC-CcceeEe--------ecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC------
Q psy9936 153 NGTVTMWSPTV-QKPLASL--------LCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT------ 217 (315)
Q Consensus 153 d~~i~i~d~~~-~~~~~~~--------~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~------ 217 (315)
++.|.+||+++ +..+..+ .++ ..+..++++++|+++++...++.|.+||.. + ..+..+..+.
T Consensus 203 ~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~-g-~~~~~~~~~~~~~g~~ 279 (333)
T 2dg1_A 203 ANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-G-YPIGQILIPGRDEGHM 279 (333)
T ss_dssp GTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTT-S-CEEEEEECTTGGGTCS
T ss_pred CCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCC-C-CEEEEEEcCCCccccc
Confidence 78999999864 3333221 112 467889999999988888888899999984 4 5666665443
Q ss_pred -CceeEEEccCC-e-EEEEcC
Q psy9936 218 -PINNLAFSQRG-L-LATSRG 235 (315)
Q Consensus 218 -~v~~~~~s~~g-~-~~~~~~ 235 (315)
.+.+++|+||+ . ++++.+
T Consensus 280 ~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 280 LRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp CBCCEEEECTTSCEEEEEEEC
T ss_pred cCcceEEECCCCCEEEEEeCc
Confidence 47899999997 3 444544
No 176
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.80 E-value=3.7e-17 Score=134.26 Aligned_cols=209 Identities=12% Similarity=0.073 Sum_probs=169.2
Q ss_pred CCCEEEEEcCCCeEEEEEccCceEEEEecCC--CceeEEEEeecCcEEEEEeCCeEEEEeCCCCEEEEeecC--CceEEE
Q psy9936 21 NGRHLLLGGKRGHVAAFDWVRKTLACEMNVM--EEVYDIKWLHLETMFAVAQKDWVYIYDNQGIELHCLKVL--NKVTRM 96 (315)
Q Consensus 21 ~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~--~~v~~~ 96 (315)
.+++|++++.++.|.+||.++++.+..+... ..+.++.++|+|++++ +.++.|+.||.+++.+..+... ..+.++
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~~G~~~W~~~~~~~~~~~~~ 82 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITRDGRELWNIAAPAGCEMQTA 82 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-ECBSEEEEECTTSCEEEEEECCTTCEEEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-eCCCCEEEECCCCCEEEEEcCCCCcccccc
Confidence 4578999999999999999999999888744 3689999999999988 5678899999988888777654 478899
Q ss_pred EEcCCCceEEEEcC-CCeEEEEEccCCeEEEEeccC------CCCeEEEEEcCCCCEEEEEcCCCeEEEEcCCCCcceeE
Q psy9936 97 EFLPYHFLLATASE-EGYLSWLDTSIGKIVSDFSAK------KGKLSVMTQNPYNACICLGHRNGTVTMWSPTVQKPLAS 169 (315)
Q Consensus 97 ~~~~~~~~l~~~~~-d~~i~~~d~~~~~~~~~~~~~------~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~~~~ 169 (315)
.+.|+|+++++.+. ++.+..+|. +|+.+..+... ......+++.++|+++++...++.|..||.. ++.+.+
T Consensus 83 ~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~ 160 (276)
T 3no2_A 83 RILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNS 160 (276)
T ss_dssp EECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEE
T ss_pred EECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEE
Confidence 99999999999887 778888886 67777665421 1234456789999999999999999999998 998888
Q ss_pred eecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-------CceeEEEccCCe-EEEEc
Q psy9936 170 LLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-------PINNLAFSQRGL-LATSR 234 (315)
Q Consensus 170 ~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-------~v~~~~~s~~g~-~~~~~ 234 (315)
+..+ ..+.++.+.++|+++++++.++.|..+|..++ +.+..+.... .+..+...++|. ++++.
T Consensus 161 ~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG-~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 161 VKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESN-RIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTC-CEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCC-cEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 8754 45567888999999999998889999999988 8887775321 167888889995 44443
No 177
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.80 E-value=1.5e-16 Score=131.39 Aligned_cols=192 Identities=12% Similarity=0.160 Sum_probs=149.3
Q ss_pred CcEEEEEE-cCCCCEEEEEcC-CCeEEEEEccCceEEEEec--CCCceeEEEEeecCcEEEEEe-CCeEEEEeCCCCEEE
Q psy9936 11 FGIYRMNY-TKNGRHLLLGGK-RGHVAAFDWVRKTLACEMN--VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGIELH 85 (315)
Q Consensus 11 ~~v~~~~~-s~~~~~l~~~~~-dg~i~v~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~~~~ 85 (315)
..+.++++ .+++.++++... ++.|.+|+ .+++....+. +...+.++++.|+|+++++.. ++.|.+|+.++..+.
T Consensus 77 ~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~ 155 (286)
T 1q7f_A 77 LYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH 155 (286)
T ss_dssp SSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEE
T ss_pred cCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEE
Confidence 46789999 577776666533 78899999 5666666664 335689999999998777765 689999999887766
Q ss_pred Eeec---CCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccC--CCCeEEEEEcCCCCEEEEEcCCC-eEEEE
Q psy9936 86 CLKV---LNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAK--KGKLSVMTQNPYNACICLGHRNG-TVTMW 159 (315)
Q Consensus 86 ~~~~---~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~--~~~v~~~~~~p~~~~l~~~~~d~-~i~i~ 159 (315)
.+.. ...+..++++|+++++++...++.|.+||.. ++.+..+..+ ...+..++++|+|+++++...++ .|.+|
T Consensus 156 ~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~ 234 (286)
T 1q7f_A 156 KFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIF 234 (286)
T ss_dssp EEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEE
T ss_pred EeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEE
Confidence 6642 3568999999999988888889999999974 6666666433 35689999999999888887776 99999
Q ss_pred cCCCCcceeEeeccc--ccEEEEEECCCCCEEEEeeCCCcEEEEEccCC
Q psy9936 160 SPTVQKPLASLLCHK--AGIQSVAVNHTGTYMATSAGDSQLRIWDVRNL 206 (315)
Q Consensus 160 d~~~~~~~~~~~~~~--~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~ 206 (315)
|.. ++.+..+..+. ..+.+++++|+|+++++ +.++.|++|++...
T Consensus 235 ~~~-g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 235 TQD-GQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp CTT-SCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred CCC-CCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 964 66677666543 34789999999987776 67899999998764
No 178
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.80 E-value=7.9e-18 Score=155.20 Aligned_cols=215 Identities=10% Similarity=-0.064 Sum_probs=150.2
Q ss_pred EEEEc--CCCCE-EEEEcC-CCeEEEEEcc--C-ceEEEEec-----CCCceeEEEEeecCcEEEEEe-C----------
Q psy9936 15 RMNYT--KNGRH-LLLGGK-RGHVAAFDWV--R-KTLACEMN-----VMEEVYDIKWLHLETMFAVAQ-K---------- 71 (315)
Q Consensus 15 ~~~~s--~~~~~-l~~~~~-dg~i~v~~~~--~-~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~-~---------- 71 (315)
...|+ |||+. |+.++. +..|+++++. + +....... +...+..++|+|||+.|+.++ +
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~ 160 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVR 160 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEE
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCce
Confidence 44455 99998 776654 5678888876 3 54433333 345688999999999888765 3
Q ss_pred CeEEEEeCCC------CEEEEee--cCCceEEEEEcCCCceEEEEcCC--------CeEEEEEcc-CC---eEEEEeccC
Q psy9936 72 DWVYIYDNQG------IELHCLK--VLNKVTRMEFLPYHFLLATASEE--------GYLSWLDTS-IG---KIVSDFSAK 131 (315)
Q Consensus 72 ~~i~i~~~~~------~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d--------~~i~~~d~~-~~---~~~~~~~~~ 131 (315)
..|++|++.+ .....+. +...+..++|+|||++|+.++.+ ..|++||+. ++ +.......+
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~ 240 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP 240 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET
T ss_pred eEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC
Confidence 4899999976 5555544 34677889999999999887754 379999998 56 444444455
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCC--eEEEEcCCCCcceeEeeccccc--------EEEEEECCCCCEEEEeeCCCcEEEE
Q psy9936 132 KGKLSVMTQNPYNACICLGHRNG--TVTMWSPTVQKPLASLLCHKAG--------IQSVAVNHTGTYMATSAGDSQLRIW 201 (315)
Q Consensus 132 ~~~v~~~~~~p~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~--------i~~~~~sp~g~~l~~~~~d~~i~iw 201 (315)
...+..++|+|||+++++++.++ .|.+||+.+++.......+... +..++|+|++.++++++. +.++||
T Consensus 241 ~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~ 319 (662)
T 3azo_A 241 EEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLG 319 (662)
T ss_dssp TBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEE
T ss_pred CceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEE
Confidence 67899999999999888888888 7778887766544333322221 467899999999999998 999999
Q ss_pred Ec--cCCCCCeeEeccCC-CceeE-EEccCCeEEE
Q psy9936 202 DV--RNLEGPLNTFRTRT-PINNL-AFSQRGLLAT 232 (315)
Q Consensus 202 d~--~~~~~~~~~~~~~~-~v~~~-~~s~~g~~~~ 232 (315)
.+ .++ .+..+..+. .+..+ +++++..+++
T Consensus 320 ~~d~~~~--~~~~l~~~~~~~~~~~s~~~~~~~~~ 352 (662)
T 3azo_A 320 ILDPESG--ELVDAAGPWTEWAATLTVSGTRAVGV 352 (662)
T ss_dssp EEETTTT--EEEECCSSCCEEEEEEEEETTEEEEE
T ss_pred EEECCCC--cEEEecCCCCeEEEEEecCCCEEEEE
Confidence 54 443 355665554 35555 4444444433
No 179
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.78 E-value=8.4e-17 Score=135.77 Aligned_cols=230 Identities=8% Similarity=0.027 Sum_probs=161.9
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCCCCEEEEe
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGIELHCL 87 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~~~~~~ 87 (315)
...|.+++|+|++..++..+.++.++.|. ++....+. +...+.+++|+|++++++++. ++.|++||..+.....+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~ 81 (333)
T 2dg1_A 5 QQDLPTLFYSGKSNSAVPIISESELQTIT---AEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRP 81 (333)
T ss_dssp -CCCCBCCSCGGGGCSSCCCCGGGSCEEE---CEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEE
T ss_pred ccccceeeecCCccceeEEeecccCcccc---cceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEE
Confidence 45678889999988877777788899992 33343443 556678999999999877765 78999999976554443
Q ss_pred --ecCCceEEEEEcCCCceEEEEcCC----CeEEEEEccCCeEEEEec--cCCCCeEEEEEcCCCCEEEEEcC------C
Q psy9936 88 --KVLNKVTRMEFLPYHFLLATASEE----GYLSWLDTSIGKIVSDFS--AKKGKLSVMTQNPYNACICLGHR------N 153 (315)
Q Consensus 88 --~~~~~v~~~~~~~~~~~l~~~~~d----~~i~~~d~~~~~~~~~~~--~~~~~v~~~~~~p~~~~l~~~~~------d 153 (315)
.+...+.+++++|+++++++...+ +.|.+||..++.....+. .+...+..++++|+|+++++... .
T Consensus 82 ~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~ 161 (333)
T 2dg1_A 82 FVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPL 161 (333)
T ss_dssp EECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCC
T ss_pred eeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCC
Confidence 344779999999999888777666 689999998776543332 23456899999999987776653 3
Q ss_pred CeEEEEcCCCCcceeEeecccccEEEEEECCCCCEEEEe-eCCCcEEEEEccCCCCCeeEe--------ccCCCceeEEE
Q psy9936 154 GTVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATS-AGDSQLRIWDVRNLEGPLNTF--------RTRTPINNLAF 224 (315)
Q Consensus 154 ~~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~-~~d~~i~iwd~~~~~~~~~~~--------~~~~~v~~~~~ 224 (315)
+.|..+|..+++.. .+..+...+..++|+|+|++|+.+ +.++.|.+||+.+....+..+ ..+..+..+++
T Consensus 162 ~~l~~~~~~~~~~~-~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~ 240 (333)
T 2dg1_A 162 GGVYYVSPDFRTVT-PIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCI 240 (333)
T ss_dssp EEEEEECTTSCCEE-EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEE
T ss_pred ceEEEEeCCCCEEE-EeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEE
Confidence 56777777655433 333334567899999999866544 567899999996421333211 12234788999
Q ss_pred ccCCeEE-EE-cCCEEEecCC
Q psy9936 225 SQRGLLA-TS-RGNIVEFLKP 243 (315)
Q Consensus 225 s~~g~~~-~~-~~~~i~~~~~ 243 (315)
+++|.+. ++ .++.|..|++
T Consensus 241 d~~G~l~v~~~~~~~v~~~d~ 261 (333)
T 2dg1_A 241 DSDDNLYVAMYGQGRVLVFNK 261 (333)
T ss_dssp BTTCCEEEEEETTTEEEEECT
T ss_pred CCCCCEEEEEcCCCEEEEECC
Confidence 9999644 43 3677887755
No 180
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.78 E-value=3.8e-16 Score=131.65 Aligned_cols=227 Identities=11% Similarity=0.063 Sum_probs=165.0
Q ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEE-eCCeEEEEeCCCCEEE-Eee
Q psy9936 11 FGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVA-QKDWVYIYDNQGIELH-CLK 88 (315)
Q Consensus 11 ~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~~~~~~~~~-~~~ 88 (315)
..+..+.+. +++.+++...++.|.+||..+++.+..+........++++++++++++. .++.|.+||..+..+. .+.
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~ 122 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIE 122 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEE
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEE
Confidence 345677775 3455556666789999999999998888766778999999999766666 4899999999765543 444
Q ss_pred cCC------ceEEEEEcCCCceEEEEc-CCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCC--------
Q psy9936 89 VLN------KVTRMEFLPYHFLLATAS-EEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRN-------- 153 (315)
Q Consensus 89 ~~~------~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d-------- 153 (315)
... ....+++ .++.++++.. .++.|.++|+.+++.+..+.... ....++++|+|++++++..+
T Consensus 123 ~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~-~p~~i~~~~dG~l~v~~~~~~~~~~~~~ 200 (328)
T 3dsm_A 123 CPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGI-QPTSLVMDKYNKMWTITDGGYEGSPYGY 200 (328)
T ss_dssp CTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSS-CBCCCEECTTSEEEEEBCCBCTTCSSCB
T ss_pred cCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC-CccceEEcCCCCEEEEECCCccCCcccc
Confidence 333 5667777 3444444443 48899999999998888776533 35678999999977776554
Q ss_pred --CeEEEEcCCCCcceeEeecc-cccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeE--ecc-CCCceeEEEcc-
Q psy9936 154 --GTVTMWSPTVQKPLASLLCH-KAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNT--FRT-RTPINNLAFSQ- 226 (315)
Q Consensus 154 --~~i~i~d~~~~~~~~~~~~~-~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~-~~~v~~~~~s~- 226 (315)
+.|.++|..+++....+... ...+..++|+|++++|+++.. .|.+||..++ +.... +.. ...+..++++|
T Consensus 201 ~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~-~~~~~~~~~~~~~~p~gi~vdp~ 277 (328)
T 3dsm_A 201 EAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEAD-RVPVRPFLEFRDTKYYGLTVNPN 277 (328)
T ss_dssp CCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCS-SCCSSCSBCCCSSCEEEEEECTT
T ss_pred CCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCC-ceeeeeeecCCCCceEEEEEcCC
Confidence 79999999998877666532 246789999999998887765 8999999887 44321 222 23578999999
Q ss_pred CCe-EEEE-----cCCEEEecCC
Q psy9936 227 RGL-LATS-----RGNIVEFLKP 243 (315)
Q Consensus 227 ~g~-~~~~-----~~~~i~~~~~ 243 (315)
++. +++. .++.|..|++
T Consensus 278 ~g~lyva~~~~y~~~~~V~v~d~ 300 (328)
T 3dsm_A 278 NGEVYVADAIDYQQQGIVYRYSP 300 (328)
T ss_dssp TCCEEEEECTTSSSEEEEEEECT
T ss_pred CCeEEEEcccccccCCEEEEECC
Confidence 454 4443 3677888775
No 181
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.78 E-value=1.6e-16 Score=147.63 Aligned_cols=230 Identities=9% Similarity=0.004 Sum_probs=161.2
Q ss_pred cEEEEEEcCCCCEEEEEcCCC-----eEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEe-CCe------------
Q psy9936 12 GIYRMNYTKNGRHLLLGGKRG-----HVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQ-KDW------------ 73 (315)
Q Consensus 12 ~v~~~~~s~~~~~l~~~~~dg-----~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~------------ 73 (315)
.+..++|||||++||.+..++ .|++||+.+++..........+..++|+|||+.|+.+. ++.
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~ 205 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTN 205 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCC
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccC
Confidence 477899999999998765433 89999999998765433223367899999999888765 433
Q ss_pred ----EEEEeCCCCE---EEEee---cCCceEEEEEcCCCceEEEEcC-----CCeEEEEEccC------Ce-EEEEeccC
Q psy9936 74 ----VYIYDNQGIE---LHCLK---VLNKVTRMEFLPYHFLLATASE-----EGYLSWLDTSI------GK-IVSDFSAK 131 (315)
Q Consensus 74 ----i~i~~~~~~~---~~~~~---~~~~v~~~~~~~~~~~l~~~~~-----d~~i~~~d~~~------~~-~~~~~~~~ 131 (315)
|++|++.+.. ..... +...+..+.|+|+|++|+.++. +..|++||+.+ +. ....+..+
T Consensus 206 ~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~ 285 (710)
T 2xdw_A 206 LHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDN 285 (710)
T ss_dssp CCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECS
T ss_pred CCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCC
Confidence 9999995432 22222 2345789999999998887764 56899999986 43 34555556
Q ss_pred CCCeEEEEEcCCCCEEEEEcC----CCeEEEEcCCCCc--ceeEeecccc--cEEEEEECCCCCEEEEeeCCCc--EEEE
Q psy9936 132 KGKLSVMTQNPYNACICLGHR----NGTVTMWSPTVQK--PLASLLCHKA--GIQSVAVNHTGTYMATSAGDSQ--LRIW 201 (315)
Q Consensus 132 ~~~v~~~~~~p~~~~l~~~~~----d~~i~i~d~~~~~--~~~~~~~~~~--~i~~~~~sp~g~~l~~~~~d~~--i~iw 201 (315)
...+.. .|+|+|+.|+..+. .+.|.+||+.++. ....+..|.. .+..++|++++.++++...++. |.+|
T Consensus 286 ~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~ 364 (710)
T 2xdw_A 286 FEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLH 364 (710)
T ss_dssp SSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEE
T ss_pred CCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEE
Confidence 555554 58899987766554 3479999998764 2345554543 6888999988888888888885 5666
Q ss_pred EccCCCCCeeEeccCC-CceeEEEccCCe-EEE--Ec---CCEEEecCC
Q psy9936 202 DVRNLEGPLNTFRTRT-PINNLAFSQRGL-LAT--SR---GNIVEFLKP 243 (315)
Q Consensus 202 d~~~~~~~~~~~~~~~-~v~~~~~s~~g~-~~~--~~---~~~i~~~~~ 243 (315)
++.++ ..+..+..+. .+..+.++|++. ++. ++ .+++..|++
T Consensus 365 ~~~~g-~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~ 412 (710)
T 2xdw_A 365 DLATG-ALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDL 412 (710)
T ss_dssp ETTTC-CEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEET
T ss_pred ECCCC-CEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEEC
Confidence 77566 6666666554 478889999883 322 22 346666654
No 182
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.78 E-value=9.2e-17 Score=137.20 Aligned_cols=220 Identities=11% Similarity=0.078 Sum_probs=145.2
Q ss_pred CCCCEEEEEc------CCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEe-----------CCeEEEEeCCC-
Q psy9936 20 KNGRHLLLGG------KRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQ-----------KDWVYIYDNQG- 81 (315)
Q Consensus 20 ~~~~~l~~~~------~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----------~~~i~i~~~~~- 81 (315)
++++++++.. .|+.|++||..+++.+..+...... .++|+||+++++++. ++.|.+||...
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 3566666543 3679999999999988777643334 899999999888874 45799999854
Q ss_pred CEEEEeec-------CCceEEEEEcCCCceEEEEcC--CCeEEEEEccCCeEEEE-eccCCCCeEEEEEcCCC-CEEEEE
Q psy9936 82 IELHCLKV-------LNKVTRMEFLPYHFLLATASE--EGYLSWLDTSIGKIVSD-FSAKKGKLSVMTQNPYN-ACICLG 150 (315)
Q Consensus 82 ~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~-~~~~~~~v~~~~~~p~~-~~l~~~ 150 (315)
+.+..+.. ......++++|+|++|+++.. +++|.+||+.+++.+.. +.... ...+.+.|++ ..+++.
T Consensus 92 ~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~--~~~v~~~p~~~~~~~~~ 169 (361)
T 2oiz_A 92 TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG--CWSVIPQPNRPRSFMTI 169 (361)
T ss_dssp CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT--EEEEEECTTSSSEEEEE
T ss_pred cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC--cceeEEcCCCCeeEEEE
Confidence 44444432 235678999999999998864 57899999999988877 54321 1112233332 223333
Q ss_pred cCCC------------------------------------------------eEEEEcCCCCcce--eEeec------cc
Q psy9936 151 HRNG------------------------------------------------TVTMWSPTVQKPL--ASLLC------HK 174 (315)
Q Consensus 151 ~~d~------------------------------------------------~i~i~d~~~~~~~--~~~~~------~~ 174 (315)
+.|| .+.++|+...... ..+.. +.
T Consensus 170 ~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~ 249 (361)
T 2oiz_A 170 CGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAK 249 (361)
T ss_dssp ETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHT
T ss_pred CCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCcccccc
Confidence 3333 3444444322110 11100 00
Q ss_pred ----ccEEEEEECCCCCEEEEeeC-----------CCcEEEEEccCCCCCeeEeccCCCceeEEEccCCe-EEEEcCCEE
Q psy9936 175 ----AGIQSVAVNHTGTYMATSAG-----------DSQLRIWDVRNLEGPLNTFRTRTPINNLAFSQRGL-LATSRGNIV 238 (315)
Q Consensus 175 ----~~i~~~~~sp~g~~l~~~~~-----------d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~-~~~~~~~~i 238 (315)
.....++|+|++..++++.. .+.|.+||+.+. +.+..+..+. +.+++|+|||. +.++.+++|
T Consensus 250 ~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~-~~v~~i~~~~-p~~ia~spdg~~l~v~n~~~v 327 (361)
T 2oiz_A 250 NWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK-QRVARIPGRD-ALSMTIDQQRNLMLTLDGGNV 327 (361)
T ss_dssp TCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT-EEEEEEECTT-CCEEEEETTTTEEEEECSSCE
T ss_pred ccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCC-cEEEEEecCC-eeEEEECCCCCEEEEeCCCeE
Confidence 01112689999887776543 347999999999 8999998888 99999999994 444445889
Q ss_pred EecCCC
Q psy9936 239 EFLKPP 244 (315)
Q Consensus 239 ~~~~~~ 244 (315)
.+|++.
T Consensus 328 ~v~D~~ 333 (361)
T 2oiz_A 328 NVYDIS 333 (361)
T ss_dssp EEEECS
T ss_pred EEEECC
Confidence 998863
No 183
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.78 E-value=1.4e-16 Score=134.49 Aligned_cols=195 Identities=9% Similarity=0.057 Sum_probs=154.3
Q ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEccCce-EEEEec----------CCCceeEEEEee-cCcEEEEEe--CCeEEE
Q psy9936 11 FGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKT-LACEMN----------VMEEVYDIKWLH-LETMFAVAQ--KDWVYI 76 (315)
Q Consensus 11 ~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~-~~~~~~----------~~~~v~~~~~~~-~~~~l~~~~--~~~i~i 76 (315)
..+..++++|+|+++++...++.|++|+..... .+..+. +......++++| ++.++++.+ ++.|++
T Consensus 91 ~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~ 170 (329)
T 3fvz_A 91 YLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQ 170 (329)
T ss_dssp SSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEE
T ss_pred CCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEE
Confidence 367899999999988888888999999976542 344442 223588999999 788888874 789999
Q ss_pred EeCCCCEEEEeecC-----------CceEEEEEcCC-CceEEEEcCCCeEEEEEccCCeEEEEec--cCCCCeEEEEEcC
Q psy9936 77 YDNQGIELHCLKVL-----------NKVTRMEFLPY-HFLLATASEEGYLSWLDTSIGKIVSDFS--AKKGKLSVMTQNP 142 (315)
Q Consensus 77 ~~~~~~~~~~~~~~-----------~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~--~~~~~v~~~~~~p 142 (315)
|+.++..+..+... ..+..++++|+ +.++++...++.|.+||..+++.+..+. .+...+..++++|
T Consensus 171 ~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p 250 (329)
T 3fvz_A 171 FSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP 250 (329)
T ss_dssp ECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET
T ss_pred EcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC
Confidence 99888777665422 34889999998 7777888889999999999898888774 3556788999999
Q ss_pred CCCEEEEE-------cCCCeEEEEcCCCCcceeEee---cccccEEEEEECCCCCEEEEeeCCCcEEEEEccCC
Q psy9936 143 YNACICLG-------HRNGTVTMWSPTVQKPLASLL---CHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNL 206 (315)
Q Consensus 143 ~~~~l~~~-------~~d~~i~i~d~~~~~~~~~~~---~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~ 206 (315)
+..+++. ..+..|.+||+.+++.+..+. ++...+..++++|+|.++++...++.|++|++...
T Consensus 251 -g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 251 -GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp -TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred -CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCcc
Confidence 4333333 344589999999998888773 56677899999999988888888999999998753
No 184
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.78 E-value=7.7e-17 Score=138.98 Aligned_cols=208 Identities=9% Similarity=0.005 Sum_probs=141.7
Q ss_pred EEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeE-------------------EEEeecCcEEEEE------
Q psy9936 16 MNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYD-------------------IKWLHLETMFAVA------ 69 (315)
Q Consensus 16 ~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~-------------------~~~~~~~~~l~~~------ 69 (315)
+.|+|||++|++++.++.|++|++.+++...... +...... +.|+|+++.++..
T Consensus 86 ~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~ 165 (396)
T 3c5m_A 86 GFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTN 165 (396)
T ss_dssp CEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTC
T ss_pred ceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCC
Confidence 6799999999999888899999999887665554 2221112 3455665554432
Q ss_pred eCCeEEEEeCCCCEEEE-eecCCceEEEEEcC-CCceEEEEcCC------CeEEEEEccCCeEEEEeccCC--CCeEEEE
Q psy9936 70 QKDWVYIYDNQGIELHC-LKVLNKVTRMEFLP-YHFLLATASEE------GYLSWLDTSIGKIVSDFSAKK--GKLSVMT 139 (315)
Q Consensus 70 ~~~~i~i~~~~~~~~~~-~~~~~~v~~~~~~~-~~~~l~~~~~d------~~i~~~d~~~~~~~~~~~~~~--~~v~~~~ 139 (315)
.+..|++||+.+..... ..+...+..+.|+| ++..|+..+.+ ..|.+||+..+... .+..+. ..+..++
T Consensus 166 ~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~ 244 (396)
T 3c5m_A 166 PTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEF 244 (396)
T ss_dssp CCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEE
T ss_pred CcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccccceE
Confidence 24589999996544433 44557789999999 78767665543 36888998765433 333332 2477899
Q ss_pred EcCCCCEEEEEcCC-----CeEEEEcCCCCcceeEeecccccEEEEEECC-CCCEEEEee----------------CCCc
Q psy9936 140 QNPYNACICLGHRN-----GTVTMWSPTVQKPLASLLCHKAGIQSVAVNH-TGTYMATSA----------------GDSQ 197 (315)
Q Consensus 140 ~~p~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp-~g~~l~~~~----------------~d~~ 197 (315)
|+|+|++|+.++.+ +.|.+||+.+++...... ... .. +.|+| +|+++++++ .+..
T Consensus 245 ~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~ 321 (396)
T 3c5m_A 245 WIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-MPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPF 321 (396)
T ss_dssp ECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-CCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCE
T ss_pred ECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee-CCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCc
Confidence 99999987776543 459999999876433222 222 23 89999 999888765 2467
Q ss_pred EEEEEccCCCCCeeEeccCCC------------ceeEEEccCCe
Q psy9936 198 LRIWDVRNLEGPLNTFRTRTP------------INNLAFSQRGL 229 (315)
Q Consensus 198 i~iwd~~~~~~~~~~~~~~~~------------v~~~~~s~~g~ 229 (315)
|++||+.++ ... .+..+.. +..++|+|||.
T Consensus 322 i~~~d~~~~-~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 363 (396)
T 3c5m_A 322 LYVLNTKAK-SAQ-KLCKHSTSWDVLDGDRQITHPHPSFTPNDD 363 (396)
T ss_dssp EEEEETTTT-BCC-EEEECCCCCCCBTTBSSTTCCCCEECTTSS
T ss_pred EEEEecccC-ceE-EccCCCCccccccccccCCCCCceEccCCC
Confidence 999999876 443 3333222 56789999994
No 185
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.78 E-value=6.2e-17 Score=137.28 Aligned_cols=211 Identities=9% Similarity=0.044 Sum_probs=145.7
Q ss_pred CcEEEEEEcCCCCEEEEEc---------CCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEeC----C--eEE
Q psy9936 11 FGIYRMNYTKNGRHLLLGG---------KRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQK----D--WVY 75 (315)
Q Consensus 11 ~~v~~~~~s~~~~~l~~~~---------~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----~--~i~ 75 (315)
..+...++ ||++++... .++.|++|++.+++.... ..+..++|+|||+.|+...+ + .|+
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~ 88 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI----ENATMPRISPDGKKIAFMRANEEKKVSEIW 88 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE----ESCEEEEECTTSSEEEEEEEETTTTEEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc----ccCCCeEECCCCCEEEEEEeccCCCcceEE
Confidence 45677778 899887642 256799999998875433 56788999999998887652 3 488
Q ss_pred EEeCCCCEEEEee-cCCceEEEEEcCCCceEEEEcCC---------------------------CeEEEEEccCCeEEEE
Q psy9936 76 IYDNQGIELHCLK-VLNKVTRMEFLPYHFLLATASEE---------------------------GYLSWLDTSIGKIVSD 127 (315)
Q Consensus 76 i~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d---------------------------~~i~~~d~~~~~~~~~ 127 (315)
+|++.+.....+. ... +..+.|+|+|+.|+.++.+ ..|.+||+.+++.+..
T Consensus 89 ~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~ 167 (347)
T 2gop_A 89 VADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEE 167 (347)
T ss_dssp EEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEE
T ss_pred EEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEee
Confidence 8888766554443 334 9999999999988887632 5699999998876455
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEcCCC---------eEEEEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCC---
Q psy9936 128 FSAKKGKLSVMTQNPYNACICLGHRNG---------TVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGD--- 195 (315)
Q Consensus 128 ~~~~~~~v~~~~~~p~~~~l~~~~~d~---------~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d--- 195 (315)
+.. . .+..++|+|+| +++++..+. .|.++| +++ ...+..+ ..+..+ +|+|++|+.++.+
T Consensus 168 l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~-~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~ 238 (347)
T 2gop_A 168 FEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGK-EEKMFEK-VSFYAV--DSDGERILLYGKPEKK 238 (347)
T ss_dssp EEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTE-EEEEEEE-ESEEEE--EECSSCEEEEECCSSS
T ss_pred ecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCc-eEEeccC-cceeeE--CCCCCEEEEEEccccC
Confidence 544 3 78889999999 777775432 455555 444 3444444 555544 9999998887754
Q ss_pred -----CcEEEEEccCCCCCeeEeccC-CCcee-EEEccCCeEE-EEcCCEEEec
Q psy9936 196 -----SQLRIWDVRNLEGPLNTFRTR-TPINN-LAFSQRGLLA-TSRGNIVEFL 241 (315)
Q Consensus 196 -----~~i~iwd~~~~~~~~~~~~~~-~~v~~-~~~s~~g~~~-~~~~~~i~~~ 241 (315)
..|.+|| ++ ........+ ..+.. +.|+ ||.++ ++.++.+++|
T Consensus 239 ~~~~~~~l~~~d--~~-~~~~l~~~~~~~~~~~~~~s-dg~~~~~~~~~~~~l~ 288 (347)
T 2gop_A 239 YMSEHNKLYIYD--GK-EVMGILDEVDRGVGQAKIKD-GKVYFTLFEEGSVNLY 288 (347)
T ss_dssp CCCSSCEEEEEC--SS-CEEESSTTCCSEEEEEEEET-TEEEEEEEETTEEEEE
T ss_pred CccccceEEEEC--CC-ceEeccccCCcccCCccEEc-CcEEEEEecCCcEEEE
Confidence 3577777 44 433333333 34675 8999 88433 3457777777
No 186
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.77 E-value=4.6e-16 Score=129.98 Aligned_cols=230 Identities=12% Similarity=0.083 Sum_probs=165.6
Q ss_pred CCcEEEEEEcCCCCEEEE-------EcCCCeEEEEEccCceEEEEec-----CCCceeEEEEeec-CcEEEEEeCCeEEE
Q psy9936 10 QFGIYRMNYTKNGRHLLL-------GGKRGHVAAFDWVRKTLACEMN-----VMEEVYDIKWLHL-ETMFAVAQKDWVYI 76 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~-------~~~dg~i~v~~~~~~~~~~~~~-----~~~~v~~~~~~~~-~~~l~~~~~~~i~i 76 (315)
-..+.+++|+++|.++++ +..++.|.+|+..+++...... +...+.++++.++ ++++++...+.|.+
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~ 96 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLV 96 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEE
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEE
Confidence 345689999999988777 5667889999988877654332 3356889999999 88777776668999
Q ss_pred EeCCCCEEEEe-ec------CCceEEEEEcCCCceEEEEcCC---------------CeEEEEEccCCeEEEEeccCCCC
Q psy9936 77 YDNQGIELHCL-KV------LNKVTRMEFLPYHFLLATASEE---------------GYLSWLDTSIGKIVSDFSAKKGK 134 (315)
Q Consensus 77 ~~~~~~~~~~~-~~------~~~v~~~~~~~~~~~l~~~~~d---------------~~i~~~d~~~~~~~~~~~~~~~~ 134 (315)
||.+ .....+ .. ...+.+++++++|+++++...+ +.|..||.. ++..... .+...
T Consensus 97 ~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~~~~~ 173 (314)
T 1pjx_A 97 VQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-TAFQF 173 (314)
T ss_dssp EETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-EEESS
T ss_pred EeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec-cCCCC
Confidence 9988 444433 21 1347899999999877776654 567788766 5543322 23345
Q ss_pred eEEEEEc----CCCCEEEEE-cCCCeEEEEcCC-CCc-----ceeEeeccc-ccEEEEEECCCCCEEEEeeCCCcEEEEE
Q psy9936 135 LSVMTQN----PYNACICLG-HRNGTVTMWSPT-VQK-----PLASLLCHK-AGIQSVAVNHTGTYMATSAGDSQLRIWD 202 (315)
Q Consensus 135 v~~~~~~----p~~~~l~~~-~~d~~i~i~d~~-~~~-----~~~~~~~~~-~~i~~~~~sp~g~~l~~~~~d~~i~iwd 202 (315)
...++|+ |+++.++.+ ..++.|.+||+. +++ ....+..+. ..+..++++++|+++++...++.|.+||
T Consensus 174 ~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d 253 (314)
T 1pjx_A 174 PNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFG 253 (314)
T ss_dssp EEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEEC
T ss_pred cceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEc
Confidence 6889999 999765544 567899999976 343 222333333 5678999999999888888888999999
Q ss_pred ccCCCCCeeEeccC-CCceeEEEccCCe-EEEEc--CCEEEecCC
Q psy9936 203 VRNLEGPLNTFRTR-TPINNLAFSQRGL-LATSR--GNIVEFLKP 243 (315)
Q Consensus 203 ~~~~~~~~~~~~~~-~~v~~~~~s~~g~-~~~~~--~~~i~~~~~ 243 (315)
..++ +.+..+..+ ..+.+++|+|+|. +.++. ++.|..+++
T Consensus 254 ~~~g-~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 254 PDGG-QPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp TTCB-SCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred CCCC-cEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 9866 666666655 4689999999995 44443 357877664
No 187
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.76 E-value=1.4e-15 Score=128.22 Aligned_cols=213 Identities=7% Similarity=0.002 Sum_probs=157.9
Q ss_pred eeCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEecCCC------ceeEEEEeecCcEEEEEe--CCeEEEEe
Q psy9936 7 LDLQFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMNVME------EVYDIKWLHLETMFAVAQ--KDWVYIYD 78 (315)
Q Consensus 7 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~------~v~~~~~~~~~~~l~~~~--~~~i~i~~ 78 (315)
+.....+..++++++++.+++...++.|.+||..+++....+.... ....+++ .+++++++.. ++.|.++|
T Consensus 80 i~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD 158 (328)
T 3dsm_A 80 ITGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKID 158 (328)
T ss_dssp EECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEE
T ss_pred cCCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEE
Confidence 3334678899999998555554478999999999999887776443 5667777 5666666653 78999999
Q ss_pred CCCCE-EEEeecCCceEEEEEcCCCceEEEEcCC----------CeEEEEEccCCeEEEEeccC-CCCeEEEEEcCCCCE
Q psy9936 79 NQGIE-LHCLKVLNKVTRMEFLPYHFLLATASEE----------GYLSWLDTSIGKIVSDFSAK-KGKLSVMTQNPYNAC 146 (315)
Q Consensus 79 ~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------~~i~~~d~~~~~~~~~~~~~-~~~v~~~~~~p~~~~ 146 (315)
+.+.. ...+........+.++|+|++++++..+ +.|.++|..+++....+... ...+..++++|+++.
T Consensus 159 ~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~ 238 (328)
T 3dsm_A 159 TETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDT 238 (328)
T ss_dssp TTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCE
T ss_pred CCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCE
Confidence 96544 4445555566789999999877776554 78999999999877766543 236889999999998
Q ss_pred EEEEcCCCeEEEEcCCCCcceeE--eecccccEEEEEECC-CCCEEEEe----eCCCcEEEEEccCCCCCeeEeccCCCc
Q psy9936 147 ICLGHRNGTVTMWSPTVQKPLAS--LLCHKAGIQSVAVNH-TGTYMATS----AGDSQLRIWDVRNLEGPLNTFRTRTPI 219 (315)
Q Consensus 147 l~~~~~d~~i~i~d~~~~~~~~~--~~~~~~~i~~~~~sp-~g~~l~~~----~~d~~i~iwd~~~~~~~~~~~~~~~~v 219 (315)
|+++.. .|.+||+.+++.... +......+..++++| ++.++++. ..++.|.+||.. + +.+..+......
T Consensus 239 lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g-~~~~~i~~G~~P 314 (328)
T 3dsm_A 239 LYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-G-KLIDEFYVGIIP 314 (328)
T ss_dssp EEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-C-CEEEEEEEEESE
T ss_pred EEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-C-CEEEEEEeccCc
Confidence 888765 899999988775321 222245788999999 56666666 578899999998 6 888888766556
Q ss_pred eeEEE
Q psy9936 220 NNLAF 224 (315)
Q Consensus 220 ~~~~~ 224 (315)
..++|
T Consensus 315 ~~~~~ 319 (328)
T 3dsm_A 315 GAFCW 319 (328)
T ss_dssp EEEEE
T ss_pred ceEEE
Confidence 66666
No 188
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.75 E-value=8e-15 Score=131.75 Aligned_cols=236 Identities=16% Similarity=0.188 Sum_probs=167.9
Q ss_pred eeCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEcc--CceEEEEecCCCceeEEEEe----ecCcEEEEEe--CCeEEEEe
Q psy9936 7 LDLQFGIYRMNYTKNGRHLLLGGKRGHVAAFDWV--RKTLACEMNVMEEVYDIKWL----HLETMFAVAQ--KDWVYIYD 78 (315)
Q Consensus 7 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~--~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~~--~~~i~i~~ 78 (315)
+.....+..+.|||||+++++++.++.|.+||+. +++.+..+........++|+ |||++++++. ++.|.++|
T Consensus 193 i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD 272 (567)
T 1qks_A 193 LDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMD 272 (567)
T ss_dssp EECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEE
T ss_pred EeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEE
Confidence 4445567899999999999999999999999995 88888777765667899999 6999888876 68999999
Q ss_pred CCC-CEEEEeec--------------------------------------------------------CCceEEEEEcCC
Q psy9936 79 NQG-IELHCLKV--------------------------------------------------------LNKVTRMEFLPY 101 (315)
Q Consensus 79 ~~~-~~~~~~~~--------------------------------------------------------~~~v~~~~~~~~ 101 (315)
..+ +.+..+.. ......+.|+|+
T Consensus 273 ~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pd 352 (567)
T 1qks_A 273 GETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGS 352 (567)
T ss_dssp TTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTT
T ss_pred CCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCC
Confidence 743 22222110 011235679999
Q ss_pred CceEEEEc-CCCeEEEEEccCCeEEEEecc-----CCCCeEEEEEcCCCC-EEEEEc-CCCeEEEEcCCC-------Ccc
Q psy9936 102 HFLLATAS-EEGYLSWLDTSIGKIVSDFSA-----KKGKLSVMTQNPYNA-CICLGH-RNGTVTMWSPTV-------QKP 166 (315)
Q Consensus 102 ~~~l~~~~-~d~~i~~~d~~~~~~~~~~~~-----~~~~v~~~~~~p~~~-~l~~~~-~d~~i~i~d~~~-------~~~ 166 (315)
+++++++. .++.|.++|+.+++.+..+.. |.+.-..+ ++|++. .++++. .++.|.++|..+ .+.
T Consensus 353 gr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kv 431 (567)
T 1qks_A 353 HRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKI 431 (567)
T ss_dssp SCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSE
T ss_pred CCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEE
Confidence 99876654 578899999999988776654 33222222 588754 445553 468999999987 566
Q ss_pred eeEeecccccEEEEEECCCCCEEEEeeC-------CCcEEEEEccCC-----CCCeeEecc---------CCCceeEEEc
Q psy9936 167 LASLLCHKAGIQSVAVNHTGTYMATSAG-------DSQLRIWDVRNL-----EGPLNTFRT---------RTPINNLAFS 225 (315)
Q Consensus 167 ~~~~~~~~~~i~~~~~sp~g~~l~~~~~-------d~~i~iwd~~~~-----~~~~~~~~~---------~~~v~~~~~s 225 (315)
+.++......-..+..+|++++|.+... .++|.++|+.+. ...+..+.. ...+..+.|+
T Consensus 432 v~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (567)
T 1qks_A 432 LDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFN 511 (567)
T ss_dssp EEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEEC
T ss_pred EEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeEC
Confidence 7777754444345788999999888663 358999999876 333344431 2358899999
Q ss_pred cCCe--EEEEc-----CCEEEecCC
Q psy9936 226 QRGL--LATSR-----GNIVEFLKP 243 (315)
Q Consensus 226 ~~g~--~~~~~-----~~~i~~~~~ 243 (315)
|+|. +++.. ++.|.+++.
T Consensus 512 ~~G~~~~~s~~~~~~~~~~i~v~D~ 536 (567)
T 1qks_A 512 KDGTEVWFSVWNGKDQESALVVVDD 536 (567)
T ss_dssp TTSSEEEEEEECCTTSCCEEEEEET
T ss_pred CCCCEEEEEeecCCCCCCcEEEEEC
Confidence 9993 44432 578888776
No 189
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.75 E-value=4.5e-14 Score=116.79 Aligned_cols=227 Identities=11% Similarity=0.027 Sum_probs=167.6
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEe-c-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCCCCEEEE
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEM-N-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGIELHC 86 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~~~~~ 86 (315)
...+.+++++++|..+++...++.|.+||.. ++..... . ....+.++++.+++.++++.. ++.|..|+.++.. ..
T Consensus 14 ~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~-~~ 91 (299)
T 2z2n_A 14 DTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKGII-KE 91 (299)
T ss_dssp SCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCE-EE
T ss_pred CCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCCcE-EE
Confidence 4689999999999988777667899999988 5543322 2 346789999999999888776 6889999987543 33
Q ss_pred ee---cCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEE-eccCCCCeEEEEEcCCCCEEEEEcCCCeEEEEcCC
Q psy9936 87 LK---VLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSD-FSAKKGKLSVMTQNPYNACICLGHRNGTVTMWSPT 162 (315)
Q Consensus 87 ~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~-~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~~ 162 (315)
+. ....+.++++.+++.++++...++.|..||. +++.... ...+...+..++++|+|+++++...++.|..||.
T Consensus 92 ~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~- 169 (299)
T 2z2n_A 92 YTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE- 169 (299)
T ss_dssp EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-
T ss_pred EeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-
Confidence 32 3357899999999988887777889999998 5554332 2334456899999999988887777889999999
Q ss_pred CCcceeE-eecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccC---CCceeEEEccCCeE-EEE-cCC
Q psy9936 163 VQKPLAS-LLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTR---TPINNLAFSQRGLL-ATS-RGN 236 (315)
Q Consensus 163 ~~~~~~~-~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---~~v~~~~~s~~g~~-~~~-~~~ 236 (315)
+++.... +..+...+.+++++++|.++++...++.|.+||. ++ . +..+... ..+.+++++++|.+ ++. .++
T Consensus 170 ~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g-~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~ 246 (299)
T 2z2n_A 170 SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SG-E-ITEFKIPTPNARPHAITAGAGIDLWFTEWGAN 246 (299)
T ss_dssp TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TC-C-EEEEECSSTTCCEEEEEECSTTCEEEEETTTT
T ss_pred CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CC-c-EEEEECCCCCCCceeEEECCCCCEEEeccCCc
Confidence 6654332 2233456889999999997777767889999999 55 4 3333222 35889999999864 444 467
Q ss_pred EEEecCC
Q psy9936 237 IVEFLKP 243 (315)
Q Consensus 237 ~i~~~~~ 243 (315)
.|..+++
T Consensus 247 ~i~~~d~ 253 (299)
T 2z2n_A 247 KIGRLTS 253 (299)
T ss_dssp EEEEEET
T ss_pred eEEEECC
Confidence 7877665
No 190
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.74 E-value=8.7e-15 Score=131.51 Aligned_cols=220 Identities=12% Similarity=0.040 Sum_probs=162.9
Q ss_pred CCCCEEEEEcCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEe-CCeEEEEeC---CCCEEEEeecCCceEE
Q psy9936 20 KNGRHLLLGGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQ-KDWVYIYDN---QGIELHCLKVLNKVTR 95 (315)
Q Consensus 20 ~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~---~~~~~~~~~~~~~v~~ 95 (315)
|.+.++++...++.|.++|..+++.+..+.....+..+.|+|||+++.+++ ++.|.+||+ +...+..+........
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ 244 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARS 244 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCce
Confidence 444567777888999999999999998888666788999999999888776 789999999 4455556665666789
Q ss_pred EEEc----CCCceEEEEcC-CCeEEEEEccCCeEEEEeccC-----------CCCeEEEEEcCCCCE-EEEEcCCCeEEE
Q psy9936 96 MEFL----PYHFLLATASE-EGYLSWLDTSIGKIVSDFSAK-----------KGKLSVMTQNPYNAC-ICLGHRNGTVTM 158 (315)
Q Consensus 96 ~~~~----~~~~~l~~~~~-d~~i~~~d~~~~~~~~~~~~~-----------~~~v~~~~~~p~~~~-l~~~~~d~~i~i 158 (315)
++|+ |+|+++++++. ++++.++|..+.+.+..+... ...+..+..++++.. ++....+|.|.+
T Consensus 245 ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~ 324 (567)
T 1qks_A 245 IETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILL 324 (567)
T ss_dssp EEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred eEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEE
Confidence 9999 69998887765 589999999999888776421 125788888988664 455567799999
Q ss_pred EcCCCCcce--eEeecccccEEEEEECCCCCEEEEee-CCCcEEEEEccCCCCCeeEecc-CC---CceeEE-EccCC-e
Q psy9936 159 WSPTVQKPL--ASLLCHKAGIQSVAVNHTGTYMATSA-GDSQLRIWDVRNLEGPLNTFRT-RT---PINNLA-FSQRG-L 229 (315)
Q Consensus 159 ~d~~~~~~~--~~~~~~~~~i~~~~~sp~g~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~-~~---~v~~~~-~s~~g-~ 229 (315)
+|..+.+.+ ..+. .......+.|+|+|+++++++ .++.|.++|+.++ +.+..+.. .. +-..+. ++|++ .
T Consensus 325 vd~~~~~~~~v~~i~-~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~-kl~~~i~vgg~~Phpg~g~~~~~p~~g~ 402 (567)
T 1qks_A 325 VDYTDLNNLKTTEIS-AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEG-KLVAIEDTGGQTPHPGRGANFVHPTFGP 402 (567)
T ss_dssp EETTCSSEEEEEEEE-CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTT-EEEEEEECSSSSBCCTTCEEEEETTTEE
T ss_pred EecCCCccceeeeee-ccccccCceECCCCCEEEEEeCCCCeEEEEECCCC-cEEEEEeccCcCCCCccceeeECCCCCc
Confidence 998865432 2222 334567889999999887665 5778999999998 77766655 22 123444 47774 4
Q ss_pred -EEEE--cCCEEEec
Q psy9936 230 -LATS--RGNIVEFL 241 (315)
Q Consensus 230 -~~~~--~~~~i~~~ 241 (315)
++++ ++++|.++
T Consensus 403 v~~t~~~g~~~Vsvi 417 (567)
T 1qks_A 403 VWATSHMGDDSVALI 417 (567)
T ss_dssp EEEEEBSSSSEEEEE
T ss_pred EEEeCCCCCCeEEEe
Confidence 3444 35777754
No 191
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.74 E-value=7.9e-15 Score=121.82 Aligned_cols=219 Identities=10% Similarity=0.018 Sum_probs=155.5
Q ss_pred cEEEEEEcCCCC-EEEEEcCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEeCCeEEEEeCCCCEEEEeecC
Q psy9936 12 GIYRMNYTKNGR-HLLLGGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQKDWVYIYDNQGIELHCLKVL 90 (315)
Q Consensus 12 ~v~~~~~s~~~~-~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~ 90 (315)
-..+..|+|++. ++++...++.|+.||..++.. ..+.....+.+++++++|+++++ .++.|.+||..+.....+...
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~dG~l~v~-~~~~l~~~d~~~g~~~~~~~~ 91 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVTMDAPVSSVALRQSGGYVAT-IGTKFCALNWKEQSAVVLATV 91 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEECSSCEEEEEEBTTSSEEEE-ETTEEEEEETTTTEEEEEEEC
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEeCCCceEEEEECCCCCEEEE-ECCeEEEEECCCCcEEEEEec
Confidence 446889999654 556666788999999988765 34556678999999999996555 477899999976655544321
Q ss_pred ------CceEEEEEcCCCceEEEEcC-----------CCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEE-EEcC
Q psy9936 91 ------NKVTRMEFLPYHFLLATASE-----------EGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACIC-LGHR 152 (315)
Q Consensus 91 ------~~v~~~~~~~~~~~l~~~~~-----------d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~-~~~~ 152 (315)
..+..++++|+|+++++... .+.|..++.. ++... +..+....+.++|+|+++.|+ +.+.
T Consensus 92 ~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~-~~~~~~~pngi~~spdg~~lyv~~~~ 169 (297)
T 3g4e_A 92 DNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKK-YFDQVDISNGLDWSLDHKIFYYIDSL 169 (297)
T ss_dssp CTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEE-EEEEESBEEEEEECTTSCEEEEEEGG
T ss_pred CCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEE-EeeccccccceEEcCCCCEEEEecCC
Confidence 34788999999986665422 2334444433 33322 223334578999999998665 4556
Q ss_pred CCeEEEEcC--CCCcc-----eeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-CceeEEE
Q psy9936 153 NGTVTMWSP--TVQKP-----LASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-PINNLAF 224 (315)
Q Consensus 153 d~~i~i~d~--~~~~~-----~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~ 224 (315)
++.|.+||+ .++.. +..+..+...+..++++++|++.++....+.|.+||..++ +.+..+..+. .+++++|
T Consensus 170 ~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG-~~~~~i~~p~~~~t~~~f 248 (297)
T 3g4e_A 170 SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTG-KRLQTVKLPVDKTTSCCF 248 (297)
T ss_dssp GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTC-CEEEEEECSSSBEEEEEE
T ss_pred CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCc-eEEEEEECCCCCceEEEE
Confidence 789999987 44532 2222334467789999999998888878888999999988 8888887764 6899999
Q ss_pred c-cCC--eEEEEcC
Q psy9936 225 S-QRG--LLATSRG 235 (315)
Q Consensus 225 s-~~g--~~~~~~~ 235 (315)
. |++ +++++..
T Consensus 249 ~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 249 GGKNYSEMYVTCAR 262 (297)
T ss_dssp ESGGGCEEEEEEBC
T ss_pred eCCCCCEEEEEcCC
Confidence 8 776 4566553
No 192
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.73 E-value=8.2e-15 Score=121.54 Aligned_cols=192 Identities=11% Similarity=0.101 Sum_probs=143.6
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEecC-----CCceeEEEEeecCcEEEEEe--------------
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMNV-----MEEVYDIKWLHLETMFAVAQ-------------- 70 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~-------------- 70 (315)
...+.+++++|+|+++++...++.|.+||..+++....... ...+.++++.|+|+++++..
T Consensus 68 ~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~ 147 (296)
T 3e5z_A 68 SHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGE 147 (296)
T ss_dssp CSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCC
T ss_pred CCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCcccccccccccccc
Confidence 45688999999999888877778999999988876544321 23467899999999888632
Q ss_pred ----CCeEEEEeCCCCEEEEeecCCceEEEEEcCCCceEEEEcCCCeEEEEEcc-CCeE---EEEeccCCCCeEEEEEcC
Q psy9936 71 ----KDWVYIYDNQGIELHCLKVLNKVTRMEFLPYHFLLATASEEGYLSWLDTS-IGKI---VSDFSAKKGKLSVMTQNP 142 (315)
Q Consensus 71 ----~~~i~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~-~~~~---~~~~~~~~~~v~~~~~~p 142 (315)
.+.|+.++..+..............++|+|+++.+++.+.++.|.+|++. +++. ...+..+...+..+++++
T Consensus 148 ~~~~~~~l~~~~~~g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~ 227 (296)
T 3e5z_A 148 MELPGRWVFRLAPDGTLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDA 227 (296)
T ss_dssp CCSSSCEEEEECTTSCEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBT
T ss_pred ccCCCcEEEEECCCCCEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECC
Confidence 34677777764443334455678899999999988777888999999986 4554 233333455577899999
Q ss_pred CCCEEEEEcCCCeEEEEcCCCCcceeEeecccccEEEEEE-CCCCCEEEEeeCCCcEEEEEccCC
Q psy9936 143 YNACICLGHRNGTVTMWSPTVQKPLASLLCHKAGIQSVAV-NHTGTYMATSAGDSQLRIWDVRNL 206 (315)
Q Consensus 143 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~-sp~g~~l~~~~~d~~i~iwd~~~~ 206 (315)
+|+++++. ++.|.+||.. ++.+..+..+.. +++++| +|+++.|++++.++ +.-++..+.
T Consensus 228 ~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~ 287 (296)
T 3e5z_A 228 GGLIWASA--GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVR 287 (296)
T ss_dssp TSCEEEEE--TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCC
T ss_pred CCCEEEEc--CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEcccc
Confidence 99876665 7899999987 777777776666 899999 68999888888764 445555553
No 193
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.71 E-value=3.2e-14 Score=123.39 Aligned_cols=226 Identities=9% Similarity=0.021 Sum_probs=157.2
Q ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEe-CC--eEEEEeCCC-CEEEE
Q psy9936 11 FGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQ-KD--WVYIYDNQG-IELHC 86 (315)
Q Consensus 11 ~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~--~i~i~~~~~-~~~~~ 86 (315)
..+..++|+|+++++++...++.|++||..++............. ++|++++..|+++. ++ .|++++..+ .....
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~ 209 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTR 209 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEE
Confidence 367899999999988887778899999999888766655434444 99999998877775 33 799998843 22233
Q ss_pred e----e-cCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEE----eccCCCCe-E-EEEEcCC-CCEEEEEcCCC
Q psy9936 87 L----K-VLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSD----FSAKKGKL-S-VMTQNPY-NACICLGHRNG 154 (315)
Q Consensus 87 ~----~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~----~~~~~~~v-~-~~~~~p~-~~~l~~~~~d~ 154 (315)
+ . ....+.+++++|++..|+++..++.|+.||..++..... ..++...- . .++|+|+ +.++++...++
T Consensus 210 ~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~ 289 (409)
T 3hrp_A 210 IGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLS 289 (409)
T ss_dssp EEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTT
T ss_pred eeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCC
Confidence 3 2 335678899999555555577788999999987653322 22222222 3 8999995 66666667788
Q ss_pred eEEEEcCCCCcceeEeeccc---------------ccEEEEEECCCCCEEEEee-CCCcEEEEEccCCCCCeeEeccC--
Q psy9936 155 TVTMWSPTVQKPLASLLCHK---------------AGIQSVAVNHTGTYMATSA-GDSQLRIWDVRNLEGPLNTFRTR-- 216 (315)
Q Consensus 155 ~i~i~d~~~~~~~~~~~~~~---------------~~i~~~~~sp~g~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~-- 216 (315)
.|+.|+.... +..+.++. .....++++|+|+++++-+ .++.|+.|++.++ . +..+..+
T Consensus 290 ~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G-~-v~~~~g~~~ 365 (409)
T 3hrp_A 290 SVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDG-Y-VSTVAGQVD 365 (409)
T ss_dssp EEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTT-E-EEEEEECTT
T ss_pred EEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCC-E-EEEEeCCCC
Confidence 9999998743 33333332 3478999999999777777 7889999997765 3 3333222
Q ss_pred --------------CCceeEEEccCCeEEEE--cCCEEEec
Q psy9936 217 --------------TPINNLAFSQRGLLATS--RGNIVEFL 241 (315)
Q Consensus 217 --------------~~v~~~~~s~~g~~~~~--~~~~i~~~ 241 (315)
..+..++++|+|.+.++ .++.|+.+
T Consensus 366 ~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i 406 (409)
T 3hrp_A 366 VASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKY 406 (409)
T ss_dssp CBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEE
T ss_pred CCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEE
Confidence 23688999999854443 35566543
No 194
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.70 E-value=7.6e-13 Score=109.42 Aligned_cols=227 Identities=11% Similarity=0.026 Sum_probs=165.1
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEE-ec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCCCCEEEE
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACE-MN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGIELHC 86 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~~~~~ 86 (315)
...+.+++++++|..+++...++.|.+|+.. ++.... +. ....+..+++.+++.++++.. ++.|..+|..+.. ..
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~g~~-~~ 96 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKKGGF-TE 96 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCE-EE
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCCCCe-EE
Confidence 4688999999999988877778899999987 554432 22 235688999999998887765 6789999988543 33
Q ss_pred ee---cCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEE-EeccCCCCeEEEEEcCCCCEEEEEcCCCeEEEEcCC
Q psy9936 87 LK---VLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVS-DFSAKKGKLSVMTQNPYNACICLGHRNGTVTMWSPT 162 (315)
Q Consensus 87 ~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~-~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~~ 162 (315)
+. ....+.++++.+++.++++...++.|..||.. ++... .+......+..+++.|+|+++++...++.|..||.
T Consensus 97 ~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~- 174 (300)
T 2qc5_A 97 YPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN- 174 (300)
T ss_dssp EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-
T ss_pred ecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-
Confidence 32 23678999999999888877778899999987 65442 23334456899999999997777766889999998
Q ss_pred CCcceeEee--cccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeE-ecc-CCCceeEEEccCCeE-EEEc-CC
Q psy9936 163 VQKPLASLL--CHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNT-FRT-RTPINNLAFSQRGLL-ATSR-GN 236 (315)
Q Consensus 163 ~~~~~~~~~--~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~-~~~v~~~~~s~~g~~-~~~~-~~ 236 (315)
+++... +. .+...+..++++++|.++++....+.|.+||. ++ ..... ... ...+.+++++++|.+ ++.. ++
T Consensus 175 ~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g-~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~ 251 (300)
T 2qc5_A 175 TGKLEE-YPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TG-EISEYDIPTPNARPHAITAGKNSEIWFTEWGAN 251 (300)
T ss_dssp TCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TC-CEEEEECSSTTCCEEEEEECSTTCEEEEETTTT
T ss_pred CCcEEE-eeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CC-cEEEEECCCCCCCceEEEECCCCCEEEeccCCC
Confidence 454332 32 33456889999999987777767778999998 43 33222 221 235789999999954 4443 57
Q ss_pred EEEecCC
Q psy9936 237 IVEFLKP 243 (315)
Q Consensus 237 ~i~~~~~ 243 (315)
.|..+++
T Consensus 252 ~i~~~~~ 258 (300)
T 2qc5_A 252 QIGRITN 258 (300)
T ss_dssp EEEEECT
T ss_pred eEEEECC
Confidence 7877665
No 195
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.70 E-value=1.6e-15 Score=140.62 Aligned_cols=227 Identities=10% Similarity=-0.014 Sum_probs=152.4
Q ss_pred cEEEEEEcCCCCEEEEE-----cCCCeEEEEEccCceEEEEecCCCce--eEEEEeecCcEEEEEe-CCe----------
Q psy9936 12 GIYRMNYTKNGRHLLLG-----GKRGHVAAFDWVRKTLACEMNVMEEV--YDIKWLHLETMFAVAQ-KDW---------- 73 (315)
Q Consensus 12 ~v~~~~~s~~~~~l~~~-----~~dg~i~v~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~-~~~---------- 73 (315)
.+.+++|||||++||.+ +.+..|++||+.+++.+. ..+...+ ..++|+|||+.|+.+. +..
T Consensus 122 ~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~-~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~ 200 (695)
T 2bkl_A 122 SLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK-VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPG 200 (695)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS-SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGG
T ss_pred EEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC-CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCC
Confidence 57899999999999843 344689999999988641 1122222 6899999999888775 443
Q ss_pred ---EEEEeCCCCE---EEEee---cCCceEEEEEcCCCceEEEEcCCC----eEEEEEccCCeEEEEeccCCCCeEEEEE
Q psy9936 74 ---VYIYDNQGIE---LHCLK---VLNKVTRMEFLPYHFLLATASEEG----YLSWLDTSIGKIVSDFSAKKGKLSVMTQ 140 (315)
Q Consensus 74 ---i~i~~~~~~~---~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~----~i~~~d~~~~~~~~~~~~~~~~v~~~~~ 140 (315)
|++|++.+.. ..... +...+..+.|+|+|++|+.++.++ .|.+++..++.. ..+..+...+....+
T Consensus 201 ~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~~~~~~~ 279 (695)
T 2bkl_A 201 YTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGVGAKYEVHA 279 (695)
T ss_dssp GCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECSSCCEEEEE
T ss_pred CCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCCCceEEEEe
Confidence 9999995432 22222 225688999999999988877665 677777655543 344445555566666
Q ss_pred cCCCCEEEEEc---CCCeEEEEcCCCCcc--eeEeecc--cccEEEEEECCCCCEEEEeeCCCcEEEEEcc-CCCCCeeE
Q psy9936 141 NPYNACICLGH---RNGTVTMWSPTVQKP--LASLLCH--KAGIQSVAVNHTGTYMATSAGDSQLRIWDVR-NLEGPLNT 212 (315)
Q Consensus 141 ~p~~~~l~~~~---~d~~i~i~d~~~~~~--~~~~~~~--~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~-~~~~~~~~ 212 (315)
++|.+++.+. .++.|.+||+.++.. ...+..+ ...+..++|+ ++.++++...|+..+||.+. .+ .....
T Consensus 280 -~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g-~~~~~ 356 (695)
T 2bkl_A 280 -WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKG-KPVRT 356 (695)
T ss_dssp -ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTC-CEEEE
T ss_pred -cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCC-CeeEE
Confidence 5666444444 257999999987753 2333333 4567888988 67788888999988888765 34 55555
Q ss_pred eccC--CCceeEEEccCCe-EE--EEc---CCEEEecCC
Q psy9936 213 FRTR--TPINNLAFSQRGL-LA--TSR---GNIVEFLKP 243 (315)
Q Consensus 213 ~~~~--~~v~~~~~s~~g~-~~--~~~---~~~i~~~~~ 243 (315)
+..+ ..+..++++|++. ++ .++ .++|..|++
T Consensus 357 l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~ 395 (695)
T 2bkl_A 357 VQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSV 395 (695)
T ss_dssp CCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEET
T ss_pred ecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence 5544 2477888999883 22 222 246766654
No 196
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.69 E-value=3.8e-13 Score=111.15 Aligned_cols=226 Identities=7% Similarity=-0.001 Sum_probs=162.2
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEE-EEec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCCCCEEEE
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLA-CEMN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGIELHC 86 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~-~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~~~~~ 86 (315)
...+.+++++++|.++++...++.|..|+.. ++.. ..+. ....+..+++.+++.++++.. ++.|..||.++.....
T Consensus 56 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~ 134 (299)
T 2z2n_A 56 DAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDDGKIREY 134 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEE
T ss_pred cCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCCCCEEEe
Confidence 4678999999999988877778889999976 3332 2222 345688999999998887765 6799999995443322
Q ss_pred e-e-cCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEE-eccCCCCeEEEEEcCCCCEEEEEcCCCeEEEEcCCC
Q psy9936 87 L-K-VLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSD-FSAKKGKLSVMTQNPYNACICLGHRNGTVTMWSPTV 163 (315)
Q Consensus 87 ~-~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~-~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~~~ 163 (315)
. . ....+..+++.+++.++++...++.|..||. +++.... +..+...+..++++++|+++++...++.|.+||. +
T Consensus 135 ~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~ 212 (299)
T 2z2n_A 135 ELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-S 212 (299)
T ss_dssp ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-T
T ss_pred cCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-C
Confidence 2 1 2356899999999988777777889999998 6665432 3334456889999999997777777889999999 6
Q ss_pred CcceeE-eecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccC---CCceeEEEccCCe-EEEEcCCEE
Q psy9936 164 QKPLAS-LLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTR---TPINNLAFSQRGL-LATSRGNIV 238 (315)
Q Consensus 164 ~~~~~~-~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---~~v~~~~~s~~g~-~~~~~~~~i 238 (315)
++.... +..+...+.+++++++|+++++...++.|..||. ++ . +..+... ..+.++++ ++|. ++++..+.+
T Consensus 213 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g-~-~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l 288 (299)
T 2z2n_A 213 GEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NN-I-IEEYPIQIKSAEPHGICF-DGETIWFAMECDKI 288 (299)
T ss_dssp CCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TT-E-EEEEECSSSSCCEEEEEE-CSSCEEEEETTTEE
T ss_pred CcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CC-c-eEEEeCCCCCCccceEEe-cCCCEEEEecCCcE
Confidence 653321 2234467899999999997776667788999998 33 3 3333222 35889999 8885 455456666
Q ss_pred EecC
Q psy9936 239 EFLK 242 (315)
Q Consensus 239 ~~~~ 242 (315)
..++
T Consensus 289 ~~~~ 292 (299)
T 2z2n_A 289 GKLT 292 (299)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5544
No 197
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.68 E-value=1.7e-13 Score=115.24 Aligned_cols=216 Identities=11% Similarity=0.055 Sum_probs=151.0
Q ss_pred EEEEEEcCCCC-EEEEEcCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEeCCeEEEEeCCCCEEEEeecC-
Q psy9936 13 IYRMNYTKNGR-HLLLGGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQKDWVYIYDNQGIELHCLKVL- 90 (315)
Q Consensus 13 v~~~~~s~~~~-~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~- 90 (315)
..+.+|+|++. ++++...++.|..|+..+++.. .+.....+.++.|+++|++++++ .+.|.+||..+..+..+...
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~~~~v~~i~~~~dg~l~v~~-~~gl~~~d~~~g~~~~~~~~~ 128 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHALPFMGSALAKISDSKQLIAS-DDGLFLRDTATGVLTLHAELE 128 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEECSSCEEEEEEEETTEEEEEE-TTEEEEEETTTCCEEEEECSS
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEECCCcceEEEEeCCCeEEEEE-CCCEEEEECCCCcEEEEeeCC
Confidence 46889999755 5566667789999999887653 34455679999999999988766 45599999865554443321
Q ss_pred -----CceEEEEEcCCCceEEEEcC------CCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEE-cCCCeEEE
Q psy9936 91 -----NKVTRMEFLPYHFLLATASE------EGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLG-HRNGTVTM 158 (315)
Q Consensus 91 -----~~v~~~~~~~~~~~l~~~~~------d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~-~~d~~i~i 158 (315)
..+..+.++|+|+++++... .+.|..++ +++... +..+......++|+|+|+.++.+ ..++.|.+
T Consensus 129 ~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~ 205 (326)
T 2ghs_A 129 SDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGYFVDTKVNRLMR 205 (326)
T ss_dssp TTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEEEEETTTCEEEE
T ss_pred CCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEEEEECCCCEEEE
Confidence 35789999999987665432 24566666 455433 22233457889999999876554 55789999
Q ss_pred EcCC--CC-cc-----eeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-CceeEEEc-cCC
Q psy9936 159 WSPT--VQ-KP-----LASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-PINNLAFS-QRG 228 (315)
Q Consensus 159 ~d~~--~~-~~-----~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~s-~~g 228 (315)
||+. ++ .. +..+......+..++++++|.++++...++.|.+||. ++ +.+..+..+. .+++++|+ |++
T Consensus 206 ~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g-~~~~~i~~~~~~~~~~af~g~d~ 283 (326)
T 2ghs_A 206 VPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DG-NHIARYEVPGKQTTCPAFIGPDA 283 (326)
T ss_dssp EEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TC-CEEEEEECSCSBEEEEEEESTTS
T ss_pred EEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CC-CEEEEEECCCCCcEEEEEecCCC
Confidence 9986 55 32 1222223456788999999998877777788999998 45 6666676655 58999998 886
Q ss_pred --eEEEEcC
Q psy9936 229 --LLATSRG 235 (315)
Q Consensus 229 --~~~~~~~ 235 (315)
+++++..
T Consensus 284 ~~L~vt~~~ 292 (326)
T 2ghs_A 284 SRLLVTSAR 292 (326)
T ss_dssp CEEEEEEBC
T ss_pred CEEEEEecC
Confidence 3444443
No 198
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.68 E-value=2.3e-14 Score=133.21 Aligned_cols=221 Identities=10% Similarity=0.003 Sum_probs=148.9
Q ss_pred CCCCEEEEEcCC-----CeEEEEEccCceEEEEec-------CCCceeEEEEeecCcEEEEEe--CC----eEEEEeCCC
Q psy9936 20 KNGRHLLLGGKR-----GHVAAFDWVRKTLACEMN-------VMEEVYDIKWLHLETMFAVAQ--KD----WVYIYDNQG 81 (315)
Q Consensus 20 ~~~~~l~~~~~d-----g~i~v~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~--~~----~i~i~~~~~ 81 (315)
|+|++++....+ +.+.+.+..+++....+. +...+..++|||||++|+.+. +| .|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 899988765432 245556655555433332 112478899999999998764 23 899999977
Q ss_pred CEEEEee-cCCceEEEEEcCCCceEEEEcCCCe----------------EEEEEccCCe----EEEEeccCCCCeEEEEE
Q psy9936 82 IELHCLK-VLNKVTRMEFLPYHFLLATASEEGY----------------LSWLDTSIGK----IVSDFSAKKGKLSVMTQ 140 (315)
Q Consensus 82 ~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~----------------i~~~d~~~~~----~~~~~~~~~~~v~~~~~ 140 (315)
....... ....+..++|+|||+.|+.++.++. |++|++.+++ .+.....+...+..+.|
T Consensus 161 g~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~ 240 (710)
T 2xdw_A 161 AKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAEL 240 (710)
T ss_dssp TEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEE
T ss_pred CCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEE
Confidence 6554422 2233678999999999998887765 9999998775 22222334556789999
Q ss_pred cCCCCEEEEEcC-----CCeEEEEcCCC------Cc-ceeEeecccccEEEEEECCCCCEEEEeeCC----CcEEEEEcc
Q psy9936 141 NPYNACICLGHR-----NGTVTMWSPTV------QK-PLASLLCHKAGIQSVAVNHTGTYMATSAGD----SQLRIWDVR 204 (315)
Q Consensus 141 ~p~~~~l~~~~~-----d~~i~i~d~~~------~~-~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d----~~i~iwd~~ 204 (315)
+|||++|+.++. +..|.+||+.+ +. ....+..+...+.. .|+|+|..|+..+.. +.|.+||+.
T Consensus 241 SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~ 319 (710)
T 2xdw_A 241 SDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFT 319 (710)
T ss_dssp CTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETT
T ss_pred cCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCC
Confidence 999998887654 57899999986 43 45666666666554 588999988776653 359999998
Q ss_pred CCCC--CeeEeccCC---CceeEEEccCCeEEEE--cCCE--EEecC
Q psy9936 205 NLEG--PLNTFRTRT---PINNLAFSQRGLLATS--RGNI--VEFLK 242 (315)
Q Consensus 205 ~~~~--~~~~~~~~~---~v~~~~~s~~g~~~~~--~~~~--i~~~~ 242 (315)
++ . ....+..+. .+.+++|++++.++++ .++. |..|+
T Consensus 320 ~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~ 365 (710)
T 2xdw_A 320 DP-EESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHD 365 (710)
T ss_dssp SC-CGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEE
T ss_pred CC-CcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEE
Confidence 76 3 234443332 4778999977754433 3553 44444
No 199
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.68 E-value=7.6e-14 Score=116.32 Aligned_cols=221 Identities=10% Similarity=0.008 Sum_probs=152.4
Q ss_pred CCcEEEEEEcCCCC-EEEEEcCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEe-CCeEEEEeCCCCEEEEe
Q psy9936 10 QFGIYRMNYTKNGR-HLLLGGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGIELHCL 87 (315)
Q Consensus 10 ~~~v~~~~~s~~~~-~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~~~~~~ 87 (315)
.....+..|+|+|+ ++++...++.|..|+. +++..........+..+++.++|+++++.. ++.|.+|+.++......
T Consensus 44 ~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~g~~~~~~ 122 (305)
T 3dr2_A 44 ATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDADGQAHLLV 122 (305)
T ss_dssp CSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCEEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEE
T ss_pred CcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCEEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCCCCEEEEE
Confidence 44567899999998 5667777889999997 455433333556789999999999877765 47899999875533222
Q ss_pred ec-----CCceEEEEEcCCCceEEE----EcC-------------CCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCC
Q psy9936 88 KV-----LNKVTRMEFLPYHFLLAT----ASE-------------EGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNA 145 (315)
Q Consensus 88 ~~-----~~~v~~~~~~~~~~~l~~----~~~-------------d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~ 145 (315)
.. ...+..++++|+|.++++ |.. .+.|..||..+++..... .......++|+|+++
T Consensus 123 ~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~ 200 (305)
T 3dr2_A 123 GRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQ 200 (305)
T ss_dssp CEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSS
T ss_pred eccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCC
Confidence 21 134678999999987776 332 256888887666544333 334578899999999
Q ss_pred EEEEEcCC------CeEEEEcCCCCcceeE---e-ecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEecc
Q psy9936 146 CICLGHRN------GTVTMWSPTVQKPLAS---L-LCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRT 215 (315)
Q Consensus 146 ~l~~~~~d------~~i~i~d~~~~~~~~~---~-~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 215 (315)
.|+.+... +.|.+||+..+. +.. + ....+.+..++++++|++.++ +.+ .|.+|+.. + +.+..+..
T Consensus 201 ~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv~-~~~-gv~~~~~~-g-~~~~~~~~ 275 (305)
T 3dr2_A 201 TLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWLWSS-SGT-GVCVFDSD-G-QLLGHIPT 275 (305)
T ss_dssp EEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCEEEC-CSS-EEEEECTT-S-CEEEEEEC
T ss_pred EEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCEEEe-cCC-cEEEECCC-C-CEEEEEEC
Confidence 87777654 789999987543 211 1 112334567899999995544 444 49999985 4 67777776
Q ss_pred CCCceeEEEccCC-eEEEEcCCEE
Q psy9936 216 RTPINNLAFSQRG-LLATSRGNIV 238 (315)
Q Consensus 216 ~~~v~~~~~s~~g-~~~~~~~~~i 238 (315)
+..+.+++|+|++ .+.++..+.+
T Consensus 276 ~~~~~~~~f~~d~~~L~it~~~~l 299 (305)
T 3dr2_A 276 PGTASNCTFDQAQQRLFITGGPCL 299 (305)
T ss_dssp SSCCCEEEECTTSCEEEEEETTEE
T ss_pred CCceeEEEEeCCCCEEEEEcCCeE
Confidence 6678999999887 3433433444
No 200
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.67 E-value=1.9e-14 Score=117.53 Aligned_cols=195 Identities=8% Similarity=-0.027 Sum_probs=144.7
Q ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEe-cCCCceeEEEEeecCcEEEEEe-CCeEEEEeCCCCEEEEe-
Q psy9936 11 FGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEM-NVMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGIELHCL- 87 (315)
Q Consensus 11 ~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~~~~~~- 87 (315)
..+.+++++++|+++++.. ++.|.+||..+....... .....+..+++.++|+++++.. ++.|.+|+..+......
T Consensus 67 ~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~ 145 (270)
T 1rwi_B 67 YQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLP 145 (270)
T ss_dssp CSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECC
T ss_pred CCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeec
Confidence 4678899999999766665 889999998765443222 1235688999999998777664 68899998644322222
Q ss_pred -ecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCeEEEEcCCCCcc
Q psy9936 88 -KVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNGTVTMWSPTVQKP 166 (315)
Q Consensus 88 -~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~ 166 (315)
.....+.+++++++|+++++...++.|.+||............+...+..++++++|.++++...++.|.+||......
T Consensus 146 ~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~ 225 (270)
T 1rwi_B 146 FTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS 225 (270)
T ss_dssp CCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCC
T ss_pred cccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcc
Confidence 2224678899999998777777788999999886654433333336689999999998777777788999999876543
Q ss_pred eeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCC
Q psy9936 167 LASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNL 206 (315)
Q Consensus 167 ~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~ 206 (315)
......+...+.+++++|+|+++++...++.|+++++...
T Consensus 226 ~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 226 TVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp EECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGG
T ss_pred eeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCc
Confidence 3222223357899999999998888889999999998764
No 201
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.67 E-value=6.5e-15 Score=136.54 Aligned_cols=219 Identities=8% Similarity=-0.032 Sum_probs=144.6
Q ss_pred cCCCCEEEEEcCCC-----eEEEEEccCceEEEEec-------CCCceeEEEEeecCcEEEEEe------CCeEEEEeCC
Q psy9936 19 TKNGRHLLLGGKRG-----HVAAFDWVRKTLACEMN-------VMEEVYDIKWLHLETMFAVAQ------KDWVYIYDNQ 80 (315)
Q Consensus 19 s~~~~~l~~~~~dg-----~i~v~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~------~~~i~i~~~~ 80 (315)
+|+|++++....++ .|.+.+..+++....+. +...+..++|||||++|+.+. +..|++||+.
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD 155 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence 48899888765433 35555655555444433 222588999999999998653 2479999997
Q ss_pred CCEEEEeecCCce--EEEEEcCCCceEEEEcCCCe-------------EEEEEccCCe----EEEEeccCCCCeEEEEEc
Q psy9936 81 GIELHCLKVLNKV--TRMEFLPYHFLLATASEEGY-------------LSWLDTSIGK----IVSDFSAKKGKLSVMTQN 141 (315)
Q Consensus 81 ~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~d~~-------------i~~~d~~~~~----~~~~~~~~~~~v~~~~~~ 141 (315)
+.......+...+ ..++|+|||+.|+.++.+.. |++|++.++. .+.....+...+..+.|+
T Consensus 156 tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~S 235 (695)
T 2bkl_A 156 SGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLS 235 (695)
T ss_dssp TCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEEC
T ss_pred CCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEEC
Confidence 6554311122222 68999999999999888765 9999998775 333333455678899999
Q ss_pred CCCCEEEEEcCCC----eEEEEcCCCCcceeEeecccccEEEEEECCCCCEEEEee---CCCcEEEEEccCCCCC---ee
Q psy9936 142 PYNACICLGHRNG----TVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSA---GDSQLRIWDVRNLEGP---LN 211 (315)
Q Consensus 142 p~~~~l~~~~~d~----~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~---~d~~i~iwd~~~~~~~---~~ 211 (315)
|||++|+.++.++ .|.+||..+++ ...+..+...+....| |+|.+++.+. .++.|.+||+.++ .. ..
T Consensus 236 pDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~-~~~~~~~ 312 (695)
T 2bkl_A 236 RDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKP-ARASWKE 312 (695)
T ss_dssp TTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBC-SGGGCEE
T ss_pred CCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCC-CccCCeE
Confidence 9999888777655 78888776554 4455556666667667 6666444443 2578999999876 43 33
Q ss_pred EeccC-C-CceeEEEccCCeEEE--EcCCEEEec
Q psy9936 212 TFRTR-T-PINNLAFSQRGLLAT--SRGNIVEFL 241 (315)
Q Consensus 212 ~~~~~-~-~v~~~~~s~~g~~~~--~~~~~i~~~ 241 (315)
.+..+ . .+.+++|+ ++.+++ ..++..++|
T Consensus 313 l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~ 345 (695)
T 2bkl_A 313 IVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVR 345 (695)
T ss_dssp EECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEE
T ss_pred EecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEE
Confidence 33332 2 37788888 453333 346655544
No 202
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.67 E-value=1.2e-13 Score=113.39 Aligned_cols=207 Identities=7% Similarity=0.006 Sum_probs=159.2
Q ss_pred EEeeCC--CcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEecCC--CceeEEEEeecCcEEEEEe--CCeEEEEe
Q psy9936 5 FDLDLQ--FGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMNVM--EEVYDIKWLHLETMFAVAQ--KDWVYIYD 78 (315)
Q Consensus 5 ~~~~~~--~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~--~~~i~i~~ 78 (315)
.++... ..+.+++++|+|++|++ .++.|+.||. +++.+..+... ..+.++.+.++|+++++.. ++.+..++
T Consensus 29 w~~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd 105 (276)
T 3no2_A 29 WEYPLEKGWECNSVAATKAGEILFS--YSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVN 105 (276)
T ss_dssp EEEECCTTCCCCEEEECTTSCEEEE--CBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEEC
T ss_pred EEeCCCccCCCcCeEECCCCCEEEe--CCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEe
Confidence 344442 36889999999998883 4678999998 88888888743 4688899999999998876 46788888
Q ss_pred CCCCEEEEeecC-------CceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEc
Q psy9936 79 NQGIELHCLKVL-------NKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGH 151 (315)
Q Consensus 79 ~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~ 151 (315)
.+++.+..+... .....+++.++|+++++...++.|..||.. |+.+..+..+ ..+.++...++|++++++.
T Consensus 106 ~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~ 183 (276)
T 3no2_A 106 MKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACG 183 (276)
T ss_dssp TTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECB
T ss_pred CCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeC
Confidence 888877665421 234556789999999999999999999988 9999888764 3456678889999999998
Q ss_pred CCCeEEEEcCCCCcceeEeeccc------ccEEEEEECCCCCEEEEeeCC--------CcEEEEEcc-CCCCCeeEeccC
Q psy9936 152 RNGTVTMWSPTVQKPLASLLCHK------AGIQSVAVNHTGTYMATSAGD--------SQLRIWDVR-NLEGPLNTFRTR 216 (315)
Q Consensus 152 ~d~~i~i~d~~~~~~~~~~~~~~------~~i~~~~~sp~g~~l~~~~~d--------~~i~iwd~~-~~~~~~~~~~~~ 216 (315)
.++.|..+|..+++.+.++..+. ..+..+...++|.++++.... +..+++.+. ++ +.+..+...
T Consensus 184 ~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g-~~~W~~~~~ 262 (276)
T 3no2_A 184 DAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEG-KVVWQLNDK 262 (276)
T ss_dssp TTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTS-BEEEEECCT
T ss_pred CCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCC-CEEEEecCc
Confidence 88899999999999998886432 237889999999988887422 244666663 44 666666544
Q ss_pred C
Q psy9936 217 T 217 (315)
Q Consensus 217 ~ 217 (315)
.
T Consensus 263 ~ 263 (276)
T 3no2_A 263 V 263 (276)
T ss_dssp T
T ss_pred c
Confidence 3
No 203
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.66 E-value=6.2e-15 Score=125.50 Aligned_cols=168 Identities=8% Similarity=0.047 Sum_probs=131.1
Q ss_pred cEEEEEEcCCCCEEEEEcCCCeEEEEEccCce-----------EEEEecCCCceeEEEEeecCcEEEEEeCCeEEEEeCC
Q psy9936 12 GIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKT-----------LACEMNVMEEVYDIKWLHLETMFAVAQKDWVYIYDNQ 80 (315)
Q Consensus 12 ~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~~ 80 (315)
++..+++++...++++|+.++ +.+|+++..+ ......+.. |+.++| |+.+|+++.++.|++||+.
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~~~~~l~v~dv~ 114 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVSTRNALYSLDLE 114 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEEESSEEEEEESS
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEEcCCcEEEEEch
Confidence 588999999999999999885 7779876443 223344566 999999 8999999999999999984
Q ss_pred CC--EEEEeecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCeEEE
Q psy9936 81 GI--ELHCLKVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNGTVTM 158 (315)
Q Consensus 81 ~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i 158 (315)
.. .-....+..++.++.+.+.. +++++.||.+.+||+.++.... +...|++++|||+| ++.|..||.+++
T Consensus 115 sl~~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~ 186 (388)
T 1xip_A 115 ELSEFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQS 186 (388)
T ss_dssp STTCEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCEEE
T ss_pred hhhccCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcEEE
Confidence 32 11223344667887776553 8888999999999999877654 33579999999999 678889999999
Q ss_pred EcCCCCcc--eeEe------e---cccccEEEEEECCCCCEEEE
Q psy9936 159 WSPTVQKP--LASL------L---CHKAGIQSVAVNHTGTYMAT 191 (315)
Q Consensus 159 ~d~~~~~~--~~~~------~---~~~~~i~~~~~sp~g~~l~~ 191 (315)
|+...... ..++ . +|...|.+|.|.+++.++++
T Consensus 187 ~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 187 FAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 99887664 4455 2 36789999999999998876
No 204
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.66 E-value=2.3e-14 Score=133.80 Aligned_cols=228 Identities=10% Similarity=0.024 Sum_probs=152.3
Q ss_pred cEEEEEEcCCCCEEEEEcCC-----CeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEe-CC-------------
Q psy9936 12 GIYRMNYTKNGRHLLLGGKR-----GHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQ-KD------------- 72 (315)
Q Consensus 12 ~v~~~~~s~~~~~l~~~~~d-----g~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~------------- 72 (315)
.+..++|||||++||.++.+ ..|++||+.+++.+........+..++|+|| +.|+.+. ++
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~ 242 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYN 242 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCC
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCC
Confidence 57789999999999876543 4699999999987654222222367899999 8777664 32
Q ss_pred -eEEEEeCCCCE---EEEeecC---CceEEEEEcCCCceEEEEcCCC-----eEEEEEccCC--eEEEEeccCCCCeEEE
Q psy9936 73 -WVYIYDNQGIE---LHCLKVL---NKVTRMEFLPYHFLLATASEEG-----YLSWLDTSIG--KIVSDFSAKKGKLSVM 138 (315)
Q Consensus 73 -~i~i~~~~~~~---~~~~~~~---~~v~~~~~~~~~~~l~~~~~d~-----~i~~~d~~~~--~~~~~~~~~~~~v~~~ 138 (315)
.|++|++.+.. ....... ..+..+.|+|||++|+..+.++ .|++||+.++ +....+..+.......
T Consensus 243 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~ 322 (741)
T 1yr2_A 243 QTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF 322 (741)
T ss_dssp CEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE
T ss_pred CEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE
Confidence 38999984322 2222222 2588999999999888776543 7999999877 3134455455445444
Q ss_pred EEcCCCCEEEEEcC----CCeEEEEcCCCC--cceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEcc-CCCCCee
Q psy9936 139 TQNPYNACICLGHR----NGTVTMWSPTVQ--KPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVR-NLEGPLN 211 (315)
Q Consensus 139 ~~~p~~~~l~~~~~----d~~i~i~d~~~~--~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~-~~~~~~~ 211 (315)
. +|+|+.|+..+. ++.|.+||+.++ .....+..+...+..++|+ ++.++++...|+..+||.+. .+ ....
T Consensus 323 ~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g-~~~~ 399 (741)
T 1yr2_A 323 V-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDG-KPAG 399 (741)
T ss_dssp E-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTS-CEEE
T ss_pred E-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCC-Ccee
Confidence 3 488988877665 456999999874 2333344445567778887 56677888889887777665 34 5555
Q ss_pred EeccC--CCceeEEEccCCe-EE--EEc---CCEEEecCC
Q psy9936 212 TFRTR--TPINNLAFSQRGL-LA--TSR---GNIVEFLKP 243 (315)
Q Consensus 212 ~~~~~--~~v~~~~~s~~g~-~~--~~~---~~~i~~~~~ 243 (315)
.+..+ ..+..+.++|++. ++ .++ .+++..|++
T Consensus 400 ~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~ 439 (741)
T 1yr2_A 400 AVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDP 439 (741)
T ss_dssp ECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEET
T ss_pred eccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence 55543 3478899999873 22 222 245666654
No 205
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.66 E-value=5.8e-15 Score=125.66 Aligned_cols=168 Identities=9% Similarity=-0.001 Sum_probs=131.8
Q ss_pred ceeEEEEeecCcEEEEEeCCeEEEEeCCC------------CEEEEeecCCceEEEEEcCCCceEEEEcCCCeEEEEEcc
Q psy9936 53 EVYDIKWLHLETMFAVAQKDWVYIYDNQG------------IELHCLKVLNKVTRMEFLPYHFLLATASEEGYLSWLDTS 120 (315)
Q Consensus 53 ~v~~~~~~~~~~~l~~~~~~~i~i~~~~~------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~ 120 (315)
+++.+++++...++++++...+.+|+++. .......... |+.++| ++++|+++ .++.|++||+.
T Consensus 39 ~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~ 114 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDLE 114 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEESS
T ss_pred cccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEch
Confidence 68999999999999999877888898521 1113344556 999999 88999998 88999999998
Q ss_pred CCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCeEEEEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEE
Q psy9936 121 IGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNGTVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRI 200 (315)
Q Consensus 121 ~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~i 200 (315)
+.........|...+..+.+.+.. +++++.||.|.+||+.++.... +...|++++|||+| ++.|..||.+++
T Consensus 115 sl~~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~ 186 (388)
T 1xip_A 115 ELSEFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQS 186 (388)
T ss_dssp STTCEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCEEE
T ss_pred hhhccCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcEEE
Confidence 766555566677778888776543 8888999999999999776542 45689999999999 788999999999
Q ss_pred EEccCCCCC--eeEe------c----cCCCceeEEEccCCeEEEE
Q psy9936 201 WDVRNLEGP--LNTF------R----TRTPINNLAFSQRGLLATS 233 (315)
Q Consensus 201 wd~~~~~~~--~~~~------~----~~~~v~~~~~s~~g~~~~~ 233 (315)
|+..+. .. ...+ . ....|.++.|.+++.++++
T Consensus 187 ~~~~~~-~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 187 FAWRNG-EMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEETT-EEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EcCCCc-cccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 998876 43 4445 2 1235999999999976665
No 206
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.64 E-value=4.7e-13 Score=111.62 Aligned_cols=194 Identities=9% Similarity=0.063 Sum_probs=142.1
Q ss_pred CcEEEEEEcCC-CCEEEEEcCCCeEEEEEccCceEEEE-ecC-----CCceeEEEEeecCcEEEEEe-C-----------
Q psy9936 11 FGIYRMNYTKN-GRHLLLGGKRGHVAAFDWVRKTLACE-MNV-----MEEVYDIKWLHLETMFAVAQ-K----------- 71 (315)
Q Consensus 11 ~~v~~~~~s~~-~~~l~~~~~dg~i~v~~~~~~~~~~~-~~~-----~~~v~~~~~~~~~~~l~~~~-~----------- 71 (315)
..+.+++++++ |+++++.. .+.|.+||.. ++.... ... ...+.++++.++|+++++.. +
T Consensus 71 ~~~~~i~~~~~~g~l~v~~~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~ 148 (314)
T 1pjx_A 71 GIPAGCQCDRDANQLFVADM-RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSM 148 (314)
T ss_dssp CCEEEEEECSSSSEEEEEET-TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTT
T ss_pred CCCceEEEecCCCcEEEEEC-CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccc
Confidence 56889999999 76555544 4479999988 765443 221 13478999999998887765 3
Q ss_pred ----CeEEEEeCCCCEEEEeecCCceEEEEEc----CCCceEEEE-cCCCeEEEEEcc-CCe-----EEEEeccCC-CCe
Q psy9936 72 ----DWVYIYDNQGIELHCLKVLNKVTRMEFL----PYHFLLATA-SEEGYLSWLDTS-IGK-----IVSDFSAKK-GKL 135 (315)
Q Consensus 72 ----~~i~i~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~-~~d~~i~~~d~~-~~~-----~~~~~~~~~-~~v 135 (315)
+.|..++..+..............++|+ |+++.++.+ ..++.|.+||+. +++ ....+..+. ..+
T Consensus 149 ~~~~~~l~~~~~~g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p 228 (314)
T 1pjx_A 149 QEKFGSIYCFTTDGQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGA 228 (314)
T ss_dssp SSSCEEEEEECTTSCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEE
T ss_pred cCCCCeEEEECCCCCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCC
Confidence 5688888775443334444567889999 999655544 567899999986 454 223333343 568
Q ss_pred EEEEEcCCCCEEEEEcCCCeEEEEcCCCCcceeEeecccccEEEEEECCCCCEEEE-eeCCCcEEEEEccCC
Q psy9936 136 SVMTQNPYNACICLGHRNGTVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMAT-SAGDSQLRIWDVRNL 206 (315)
Q Consensus 136 ~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~-~~~d~~i~iwd~~~~ 206 (315)
..++++++|+++++...++.|.+||..+++.+..+..+...+.+++|+|+|++|++ ...++.|..|++...
T Consensus 229 ~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 229 DGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp EEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred CceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 88999999998888777889999999888877777766678999999999995554 455678999998753
No 207
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.63 E-value=4.4e-12 Score=104.79 Aligned_cols=226 Identities=8% Similarity=0.013 Sum_probs=160.6
Q ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEE-ec-CCCceeEEEEeecCcEEEEEe-CCeEEEEeCCCCEEEE-
Q psy9936 11 FGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACE-MN-VMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGIELHC- 86 (315)
Q Consensus 11 ~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~~~~~- 86 (315)
..+.+++++++|.++++...++.|..||.. ++.... .. ....+.++++.+++.++++.. ++.|..++.++.....
T Consensus 62 ~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~ 140 (300)
T 2qc5_A 62 AKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTADGTIYEYD 140 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEEEE
T ss_pred CcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCCCCEEEcc
Confidence 678999999999888877667889999987 554322 22 235688999999998887776 6799999988544322
Q ss_pred ee-cCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEE-eccCCCCeEEEEEcCCCCEEEEEcCCCeEEEEcCCCC
Q psy9936 87 LK-VLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSD-FSAKKGKLSVMTQNPYNACICLGHRNGTVTMWSPTVQ 164 (315)
Q Consensus 87 ~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~-~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~ 164 (315)
+. ....+.++++.++++++++...++.|..||. +++.... ...+...+..++++++|+++++....+.|.+||. ++
T Consensus 141 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g 218 (300)
T 2qc5_A 141 LPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TG 218 (300)
T ss_dssp CSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TC
T ss_pred CCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CC
Confidence 22 2367899999999997777666789999998 5554432 2234456889999999987777777788999998 44
Q ss_pred cceeE-eecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccC---CCceeEEEccCCeEEEEcCCEEEe
Q psy9936 165 KPLAS-LLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTR---TPINNLAFSQRGLLATSRGNIVEF 240 (315)
Q Consensus 165 ~~~~~-~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---~~v~~~~~s~~g~~~~~~~~~i~~ 240 (315)
+.... +..+...+.+++++++|+++++...++.|..||.. + . +..+... ..+.+++++++|.+.++..+.|..
T Consensus 219 ~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g-~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~i~~ 295 (300)
T 2qc5_A 219 EISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITND-N-T-IQEYQLQTENAEPHGITFGKDGSVWFALKCKIGK 295 (300)
T ss_dssp CEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-S-C-EEEEECCSTTCCCCCEEECTTSCEEEECSSEEEE
T ss_pred cEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCC-C-c-EEEEECCccCCccceeEeCCCCCEEEEccCceEE
Confidence 43322 22345678899999999977776667899999983 3 3 2233222 358899999999654443235544
Q ss_pred cC
Q psy9936 241 LK 242 (315)
Q Consensus 241 ~~ 242 (315)
++
T Consensus 296 ~~ 297 (300)
T 2qc5_A 296 LN 297 (300)
T ss_dssp EE
T ss_pred eC
Confidence 43
No 208
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.63 E-value=1.1e-12 Score=112.22 Aligned_cols=220 Identities=12% Similarity=0.023 Sum_probs=144.6
Q ss_pred EEcCCCCEEEEEcC--CC---eEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEe-----------CCeEEEEeCC
Q psy9936 17 NYTKNGRHLLLGGK--RG---HVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQ-----------KDWVYIYDNQ 80 (315)
Q Consensus 17 ~~s~~~~~l~~~~~--dg---~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----------~~~i~i~~~~ 80 (315)
...|+++++++... .. .|.++|..+++.+..+...... .+.++|||+++.++. ++.|.+||..
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~ 105 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV 105 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECC
Confidence 44578887776653 22 7899999999988877744334 999999999988874 4679999995
Q ss_pred C-CEEEEeecC--------CceEEEEEcCCCceEEEEcC--CCeEEEEEccCCeEEEE-eccCCCCeEEEEEcCCCC-EE
Q psy9936 81 G-IELHCLKVL--------NKVTRMEFLPYHFLLATASE--EGYLSWLDTSIGKIVSD-FSAKKGKLSVMTQNPYNA-CI 147 (315)
Q Consensus 81 ~-~~~~~~~~~--------~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~-~~~~~~~v~~~~~~p~~~-~l 147 (315)
+ ..+..+... .....+.|+|+|++|++++. ++.|.++| .+++.+.. +.... . +.+.|+++ .+
T Consensus 106 t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~-~---~~~~~~~~~~~ 180 (373)
T 2mad_H 106 TFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT-C---YHIHPGAPSTF 180 (373)
T ss_pred CCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc-e---EEEEeCCCceE
Confidence 4 333333221 23568999999999998874 47899999 99988877 54321 1 12222221 22
Q ss_pred EEEcCCC-----------------------------------------------eEEEEcCCCCc--ceeEeec------
Q psy9936 148 CLGHRNG-----------------------------------------------TVTMWSPTVQK--PLASLLC------ 172 (315)
Q Consensus 148 ~~~~~d~-----------------------------------------------~i~i~d~~~~~--~~~~~~~------ 172 (315)
++.+.|| .+.+.|+.+.. .+..+..
T Consensus 181 ~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~ 260 (373)
T 2mad_H 181 YLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRK 260 (373)
T ss_pred EEEcCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCccc
Confidence 2223333 34444443221 1111110
Q ss_pred ----ccccEEEEEECCCCCEEEEeeC----------CCcEEEEEccCCCCCeeEeccCCCceeEEEccCCe--EEEE--c
Q psy9936 173 ----HKAGIQSVAVNHTGTYMATSAG----------DSQLRIWDVRNLEGPLNTFRTRTPINNLAFSQRGL--LATS--R 234 (315)
Q Consensus 173 ----~~~~i~~~~~sp~g~~l~~~~~----------d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~--~~~~--~ 234 (315)
.......+.++|++..++++.. ++.|.++|+.+. +.+..+.......+++|+|||. +.++ .
T Consensus 261 ~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~-~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~ 339 (373)
T 2mad_H 261 ADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG-QTSSQISLGHDVDAISVAQDGGPDLYALSAG 339 (373)
T ss_pred ccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC-EEEEEEECCCCcCeEEECCCCCeEEEEEcCC
Confidence 0112233778999887777643 357999999998 8888888777799999999995 3333 3
Q ss_pred CCEEEecCC
Q psy9936 235 GNIVEFLKP 243 (315)
Q Consensus 235 ~~~i~~~~~ 243 (315)
++.|.+++.
T Consensus 340 ~~~V~ViD~ 348 (373)
T 2mad_H 340 TEVLHIYDA 348 (373)
T ss_pred CCeEEEEEC
Confidence 788988886
No 209
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.62 E-value=9e-13 Score=109.36 Aligned_cols=183 Identities=13% Similarity=0.068 Sum_probs=134.5
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEecC-----CCceeEEEEeecCcEEEEEeC------------C
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMNV-----MEEVYDIKWLHLETMFAVAQK------------D 72 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~------------~ 72 (315)
...+.+++++|+|+++++. ++.|.+||..+++....... ...++++++.|+|+++++... +
T Consensus 53 ~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~ 130 (297)
T 3g4e_A 53 DAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQG 130 (297)
T ss_dssp SSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCE
T ss_pred CCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCc
Confidence 5678999999999965543 45799999988876443322 234788999999998776531 3
Q ss_pred eEEEEeCCCCEEEEeecCCceEEEEEcCCCceEE-EEcCCCeEEEEEc--cCCeE-----EEEeccCCCCeEEEEEcCCC
Q psy9936 73 WVYIYDNQGIELHCLKVLNKVTRMEFLPYHFLLA-TASEEGYLSWLDT--SIGKI-----VSDFSAKKGKLSVMTQNPYN 144 (315)
Q Consensus 73 ~i~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~~d~--~~~~~-----~~~~~~~~~~v~~~~~~p~~ 144 (315)
.|+.++..+............+.++|+|+++.|+ +.+.++.|.+||+ .++.. ...+..+.+.+..++++++|
T Consensus 131 ~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G 210 (297)
T 3g4e_A 131 ALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEG 210 (297)
T ss_dssp EEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTS
T ss_pred EEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCC
Confidence 4666666555444444556678999999998664 5566789999997 45543 22233334568899999999
Q ss_pred CEEEEEcCCCeEEEEcCCCCcceeEeecccccEEEEEEC-CCCCEEEEeeC
Q psy9936 145 ACICLGHRNGTVTMWSPTVQKPLASLLCHKAGIQSVAVN-HTGTYMATSAG 194 (315)
Q Consensus 145 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s-p~g~~l~~~~~ 194 (315)
++.++....+.|..||..+++.+..+..+...+++++|. |+++.|++++.
T Consensus 211 ~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 211 KLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp CEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred CEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 888777778899999999999888888776789999998 88876665543
No 210
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.60 E-value=3.1e-12 Score=109.44 Aligned_cols=192 Identities=15% Similarity=0.073 Sum_probs=128.6
Q ss_pred EEEEcCCCCEEEEEc----------CCCeEEEEEccCceEEEEecCC--------CceeEEEEeecCcEEEEEe---CCe
Q psy9936 15 RMNYTKNGRHLLLGG----------KRGHVAAFDWVRKTLACEMNVM--------EEVYDIKWLHLETMFAVAQ---KDW 73 (315)
Q Consensus 15 ~~~~s~~~~~l~~~~----------~dg~i~v~~~~~~~~~~~~~~~--------~~v~~~~~~~~~~~l~~~~---~~~ 73 (315)
.+++||||++++++. .++.|.+||..+.+....+... .....+.|+|||++|++++ ++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 899999999988875 3578999999998887766532 2355799999999998875 368
Q ss_pred EEEEeCCCCEEE-E-eecCCceEEEEEcCCC-ceEEEEcCCCeEEEEEccCCeEE-------------------------
Q psy9936 74 VYIYDNQGIELH-C-LKVLNKVTRMEFLPYH-FLLATASEEGYLSWLDTSIGKIV------------------------- 125 (315)
Q Consensus 74 i~i~~~~~~~~~-~-~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~~------------------------- 125 (315)
|.++| .+..+. . +.... ++.+.|++ ..+++.+.||.+.++|. +++.+
T Consensus 150 v~viD-~t~~~~~~~i~~~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 224 (373)
T 2mad_H 150 VGLVV-QGGSSDDQLLSSPT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKS 224 (373)
T ss_pred EEEEE-CCCCEEeEEcCCCc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecC
Confidence 99999 765433 3 22211 12222332 22233333444444443 22211
Q ss_pred -------------------------EEecc----------CCCCeEEEEEcCCCCEEEEEcC----------CCeEEEEc
Q psy9936 126 -------------------------SDFSA----------KKGKLSVMTQNPYNACICLGHR----------NGTVTMWS 160 (315)
Q Consensus 126 -------------------------~~~~~----------~~~~v~~~~~~p~~~~l~~~~~----------d~~i~i~d 160 (315)
..+.. .......++++|+++.++++.. .+.|.++|
T Consensus 225 ~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID 304 (373)
T 2mad_H 225 GRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVT 304 (373)
T ss_pred CEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEE
Confidence 11110 0112333778999887777543 35899999
Q ss_pred CCCCcceeEeecccccEEEEEECCCCC-EEEEee-CCCcEEEEEccCCCCCeeEe
Q psy9936 161 PTVQKPLASLLCHKAGIQSVAVNHTGT-YMATSA-GDSQLRIWDVRNLEGPLNTF 213 (315)
Q Consensus 161 ~~~~~~~~~~~~~~~~i~~~~~sp~g~-~l~~~~-~d~~i~iwd~~~~~~~~~~~ 213 (315)
+.+++.+.++. ......+++|+|||+ +++++. .++.|.+||+.++ +.+..+
T Consensus 305 ~~t~~vv~~i~-~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~-~vv~~i 357 (373)
T 2mad_H 305 GLVGQTSSQIS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAG-DQDQST 357 (373)
T ss_pred CCCCEEEEEEE-CCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCC-CEEeee
Confidence 99999988886 344678999999999 777776 5899999999998 777773
No 211
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.58 E-value=1.6e-12 Score=110.29 Aligned_cols=225 Identities=13% Similarity=0.057 Sum_probs=153.2
Q ss_pred EEEEcCCCCEEEEEc----------CCCeEEEEEccCceEEEEecCC--------CceeEEEEeecCcEEEEEe---CCe
Q psy9936 15 RMNYTKNGRHLLLGG----------KRGHVAAFDWVRKTLACEMNVM--------EEVYDIKWLHLETMFAVAQ---KDW 73 (315)
Q Consensus 15 ~~~~s~~~~~l~~~~----------~dg~i~v~~~~~~~~~~~~~~~--------~~v~~~~~~~~~~~l~~~~---~~~ 73 (315)
.+++||||++++++. .++.|.+||..+++....+... .....+.|+|||+++.++. ++.
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~ 161 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA 161 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCe
Confidence 399999999887764 3568999999999988877532 2467799999999888775 478
Q ss_pred EEEEeCCCCEE-EEeecCCceEEEEEcCCCceEEEEcCCCeEEEEEccC-CeEEEEeccC----CCCeE-EEEE-cCCCC
Q psy9936 74 VYIYDNQGIEL-HCLKVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSI-GKIVSDFSAK----KGKLS-VMTQ-NPYNA 145 (315)
Q Consensus 74 i~i~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~-~~~~~~~~~~----~~~v~-~~~~-~p~~~ 145 (315)
|.++|+....+ ..+...+. ...+......+++.+.||++.+.++.+ ++.......+ ..++. ...| .++|+
T Consensus 162 VsVID~~t~~vv~tI~v~g~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~ 239 (386)
T 3sjl_D 162 VGVVDLEGKAFKRMLDVPDC--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGR 239 (386)
T ss_dssp EEEEETTTTEEEEEEECCSE--EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTE
T ss_pred EEEEECCCCcEEEEEECCCc--ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCc
Confidence 99999965543 44433321 122322345667778888888888875 5543221111 11221 2355 46776
Q ss_pred EEEEEcCCCeEEEEcCCCCc--ceeEee----------cccccEEEEEECCCCCEEEEeeC----------CCcEEEEEc
Q psy9936 146 CICLGHRNGTVTMWSPTVQK--PLASLL----------CHKAGIQSVAVNHTGTYMATSAG----------DSQLRIWDV 203 (315)
Q Consensus 146 ~l~~~~~d~~i~i~d~~~~~--~~~~~~----------~~~~~i~~~~~sp~g~~l~~~~~----------d~~i~iwd~ 203 (315)
+++ .+.+|.|.+.|+.++. .+..+. ........++++|+++.++.... .+.|.++|+
T Consensus 240 ~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~ 318 (386)
T 3sjl_D 240 LVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDA 318 (386)
T ss_dssp EEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEET
T ss_pred EEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEEC
Confidence 555 5558999999997664 222222 01223335778999888777643 247999999
Q ss_pred cCCCCCeeEeccCCCceeEEEccCCe--EEEE-c-CCEEEecCC
Q psy9936 204 RNLEGPLNTFRTRTPINNLAFSQRGL--LATS-R-GNIVEFLKP 243 (315)
Q Consensus 204 ~~~~~~~~~~~~~~~v~~~~~s~~g~--~~~~-~-~~~i~~~~~ 243 (315)
.+. +.+..+....++++++++||+. +.++ . +++|.+++.
T Consensus 319 ~t~-kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~ 361 (386)
T 3sjl_D 319 KTG-ERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDA 361 (386)
T ss_dssp TTC-CEEEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEET
T ss_pred CCC-eEEEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEEC
Confidence 999 8999988877899999999983 4443 3 788988776
No 212
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.57 E-value=1.5e-12 Score=110.34 Aligned_cols=221 Identities=10% Similarity=0.069 Sum_probs=147.3
Q ss_pred CcEEEEEEcCCCCEEEEEc--CCCeEEEEEccCceEEEEec--------CCCceeEEEEeecCcEEEEEe------CCeE
Q psy9936 11 FGIYRMNYTKNGRHLLLGG--KRGHVAAFDWVRKTLACEMN--------VMEEVYDIKWLHLETMFAVAQ------KDWV 74 (315)
Q Consensus 11 ~~v~~~~~s~~~~~l~~~~--~dg~i~v~~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~------~~~i 74 (315)
..+..++++|+|+.+++.. .++.++||.+.+++.. .+. +...+..+++.++++++++.. +..|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 5789999999999888853 2342555555455543 221 235689999999998777653 4789
Q ss_pred EEEeCCCCE-EEEeecC-------CceEEEEEcCCCceE-EEEc---CCCeEEEEEccCCeEEEEeccCC----------
Q psy9936 75 YIYDNQGIE-LHCLKVL-------NKVTRMEFLPYHFLL-ATAS---EEGYLSWLDTSIGKIVSDFSAKK---------- 132 (315)
Q Consensus 75 ~i~~~~~~~-~~~~~~~-------~~v~~~~~~~~~~~l-~~~~---~d~~i~~~d~~~~~~~~~~~~~~---------- 132 (315)
.+||+.+.. +..+... ..+..+++++++..+ ++.. .++.|.+||+.+++....+..|.
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~ 175 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLV 175 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCE
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccccee
Confidence 999996544 4444321 346889999865444 4444 57889999998887666554321
Q ss_pred -------------------CCeEEEEEcCCCCEEEEEcCCC-eEEEEcCC---CCc-----cee--EeecccccEEEEEE
Q psy9936 133 -------------------GKLSVMTQNPYNACICLGHRNG-TVTMWSPT---VQK-----PLA--SLLCHKAGIQSVAV 182 (315)
Q Consensus 133 -------------------~~v~~~~~~p~~~~l~~~~~d~-~i~i~d~~---~~~-----~~~--~~~~~~~~i~~~~~ 182 (315)
..+..++|+|+|+.|+++...+ .+..++.. .+. ... ...++......+++
T Consensus 176 ~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~ 255 (343)
T 2qe8_A 176 IDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISI 255 (343)
T ss_dssp ETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEE
T ss_pred ECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEE
Confidence 2368899999999888876655 55555532 111 011 11234445667999
Q ss_pred CCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccC--CCceeEEEccCCeEEEE
Q psy9936 183 NHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTR--TPINNLAFSQRGLLATS 233 (315)
Q Consensus 183 sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--~~v~~~~~s~~g~~~~~ 233 (315)
+++|.++++...++.|.+||..++ +........ ..+.+++|+++|.+.++
T Consensus 256 d~~G~l~va~~~~~~V~~~d~~~G-~~~~~~~~~~~~~p~~va~~~~g~l~v~ 307 (343)
T 2qe8_A 256 DKDHNIYVGDLAHSAIGVITSADR-AYKLLVTDEKLSWTDSFNFGSDGYLYFD 307 (343)
T ss_dssp CTTCCEEEEEGGGTEEEEEETTTT-EEEEEEECGGGSCEEEEEECTTSCEEEE
T ss_pred CCCCCEEEEccCCCeEEEEECCCC-CEEEEEECCceecCCeeEECCCCcEEEE
Confidence 999999999888999999998555 432222222 24789999999854443
No 213
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.55 E-value=6.3e-13 Score=123.11 Aligned_cols=226 Identities=11% Similarity=0.079 Sum_probs=146.8
Q ss_pred cEEEEEEcCCCCEEEEEc-----CCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEe-CC-------------
Q psy9936 12 GIYRMNYTKNGRHLLLGG-----KRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQ-KD------------- 72 (315)
Q Consensus 12 ~v~~~~~s~~~~~l~~~~-----~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~------------- 72 (315)
.+..++|||||++||.+. ....|++||+.+++.+...........++|+ |++.|+.+. +.
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~ 208 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQH 208 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCC
T ss_pred EEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCc
Confidence 578889999999998532 2357999999999865432111113678999 998877765 42
Q ss_pred eEEEEeCCCCE---EEEeec----CCceEEEEEcCCCceEEEEcC----CCeEEEEEccCCe-EEEEeccCCCCeEEEEE
Q psy9936 73 WVYIYDNQGIE---LHCLKV----LNKVTRMEFLPYHFLLATASE----EGYLSWLDTSIGK-IVSDFSAKKGKLSVMTQ 140 (315)
Q Consensus 73 ~i~i~~~~~~~---~~~~~~----~~~v~~~~~~~~~~~l~~~~~----d~~i~~~d~~~~~-~~~~~~~~~~~v~~~~~ 140 (315)
.|++|++.+.. ...... .....++.|+|||++|+.... ...|+++|+.++. ....+..+....... +
T Consensus 209 ~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~ 287 (693)
T 3iuj_A 209 KVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-V 287 (693)
T ss_dssp EEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-E
T ss_pred EEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-E
Confidence 49999984321 222222 234678999999998765432 3579999997763 344455555555544 6
Q ss_pred cCCCCEEE-EEcC---CCeEEEEcCCCCcc--eeEeecccccEEEEEECCCCCEEEEeeCCC---cEEEEEccCCCCCee
Q psy9936 141 NPYNACIC-LGHR---NGTVTMWSPTVQKP--LASLLCHKAGIQSVAVNHTGTYMATSAGDS---QLRIWDVRNLEGPLN 211 (315)
Q Consensus 141 ~p~~~~l~-~~~~---d~~i~i~d~~~~~~--~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~---~i~iwd~~~~~~~~~ 211 (315)
+++|..|+ +... .+.|..+|+.++.. ...+..|...+. .|+|++++|+....++ .|++|++.+. ...
T Consensus 288 ~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~--~~~ 363 (693)
T 3iuj_A 288 DNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGK--RVR 363 (693)
T ss_dssp EEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSC--EEE
T ss_pred eccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCC--eeE
Confidence 66666554 4433 36899999987654 345555666554 8999999888776544 6889998753 444
Q ss_pred EeccCC--CceeEEEccCCe--EEEEcC----CEEEecCC
Q psy9936 212 TFRTRT--PINNLAFSQRGL--LATSRG----NIVEFLKP 243 (315)
Q Consensus 212 ~~~~~~--~v~~~~~s~~g~--~~~~~~----~~i~~~~~ 243 (315)
.+..+. .+..+.++|++. ++...+ +++..+++
T Consensus 364 ~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~ 403 (693)
T 3iuj_A 364 EVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEP 403 (693)
T ss_dssp EECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECT
T ss_pred EeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEEC
Confidence 444332 466777888772 333223 56666654
No 214
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.55 E-value=1.3e-11 Score=103.75 Aligned_cols=182 Identities=10% Similarity=0.032 Sum_probs=129.7
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEecC-----CCceeEEEEeecCcEEEEEeC-------CeEEEE
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMNV-----MEEVYDIKWLHLETMFAVAQK-------DWVYIY 77 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~-------~~i~i~ 77 (315)
...+.+++++|+|+++++. .+ .|.+||..+++....... ...++++.++|+|+++++..+ +.|+.+
T Consensus 89 ~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~ 166 (326)
T 2ghs_A 89 PFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHV 166 (326)
T ss_dssp SSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEE
T ss_pred CCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEE
Confidence 5678999999999877754 44 499999988876443322 135889999999998776542 467777
Q ss_pred eCCCCEEEEeecCCceEEEEEcCCCceEEEE-cCCCeEEEEEcc--CC-e-----EEEEeccCCCCeEEEEEcCCCCEEE
Q psy9936 78 DNQGIELHCLKVLNKVTRMEFLPYHFLLATA-SEEGYLSWLDTS--IG-K-----IVSDFSAKKGKLSVMTQNPYNACIC 148 (315)
Q Consensus 78 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~--~~-~-----~~~~~~~~~~~v~~~~~~p~~~~l~ 148 (315)
+ ++..............++|+|+++.++.+ +.++.|.+||+. ++ . ....+......+..++++++|++.+
T Consensus 167 ~-~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwv 245 (326)
T 2ghs_A 167 A-KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWN 245 (326)
T ss_dssp E-TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEE
T ss_pred e-CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEE
Confidence 7 44332222333567899999999866554 557899999986 55 3 2223333345678899999998777
Q ss_pred EEcCCCeEEEEcCCCCcceeEeecccccEEEEEEC-CCCCEEEEeeCC
Q psy9936 149 LGHRNGTVTMWSPTVQKPLASLLCHKAGIQSVAVN-HTGTYMATSAGD 195 (315)
Q Consensus 149 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s-p~g~~l~~~~~d 195 (315)
+...++.|.+||. +++.+..+..+...+++++|+ |++..|++++..
T Consensus 246 a~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 246 ARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp EEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred EEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEecC
Confidence 7666789999998 577777777666779999998 888776555433
No 215
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.55 E-value=1.4e-12 Score=121.72 Aligned_cols=221 Identities=9% Similarity=-0.012 Sum_probs=139.6
Q ss_pred cCCCCEEEEEcCCC-----eEEEEEcc---CceEEEEec-------CCCceeEEEEeecCcEEEEEeC------CeEEEE
Q psy9936 19 TKNGRHLLLGGKRG-----HVAAFDWV---RKTLACEMN-------VMEEVYDIKWLHLETMFAVAQK------DWVYIY 77 (315)
Q Consensus 19 s~~~~~l~~~~~dg-----~i~v~~~~---~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~------~~i~i~ 77 (315)
+|+|++++....++ .|.+.+.. +++....+. +...+..++|||||++|+.+.+ ..|++|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 48999888665433 34444544 444333322 1125788999999999987752 369999
Q ss_pred eCCCCEEEEee-cCCceEEEEEcCCCceEEEEcCCCe--------------EEEEEccCCe----EEEEeccCCCCeEEE
Q psy9936 78 DNQGIELHCLK-VLNKVTRMEFLPYHFLLATASEEGY--------------LSWLDTSIGK----IVSDFSAKKGKLSVM 138 (315)
Q Consensus 78 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~--------------i~~~d~~~~~----~~~~~~~~~~~v~~~ 138 (315)
|+.+....... ....+..++|+|| +.|+.++.++. |++|++.++. .+.....+...+..+
T Consensus 195 dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~ 273 (741)
T 1yr2_A 195 GVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGA 273 (741)
T ss_dssp ETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEE
T ss_pred ECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEE
Confidence 99765543322 1122357899999 88888876543 8899987764 222222333458899
Q ss_pred EEcCCCCEEEEEcCC-----CeEEEEcCCCC--cceeEeecccccEEEEEECCCCCEEEEeeCC----CcEEEEEccCCC
Q psy9936 139 TQNPYNACICLGHRN-----GTVTMWSPTVQ--KPLASLLCHKAGIQSVAVNHTGTYMATSAGD----SQLRIWDVRNLE 207 (315)
Q Consensus 139 ~~~p~~~~l~~~~~d-----~~i~i~d~~~~--~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d----~~i~iwd~~~~~ 207 (315)
.|+|||++|+..+.+ ..|.+||+.++ ++...+..+...+.... +|+|..|+..+.+ +.|.+||+.++.
T Consensus 274 ~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 352 (741)
T 1yr2_A 274 SVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGST 352 (741)
T ss_dssp EECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSS
T ss_pred EECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCc
Confidence 999999988877644 38999999876 42455555555555553 4899988877754 459999987741
Q ss_pred -CCeeEeccCC-CceeEEEccCCeEEE-EcCCEEEec
Q psy9936 208 -GPLNTFRTRT-PINNLAFSQRGLLAT-SRGNIVEFL 241 (315)
Q Consensus 208 -~~~~~~~~~~-~v~~~~~s~~g~~~~-~~~~~i~~~ 241 (315)
.....+..+. .+.++.|+.+.+++. ..++..++|
T Consensus 353 ~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~ 389 (741)
T 1yr2_A 353 PRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVL 389 (741)
T ss_dssp CEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEE
T ss_pred cccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEE
Confidence 2233333333 356777873333332 346655433
No 216
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.53 E-value=1.3e-11 Score=102.63 Aligned_cols=206 Identities=12% Similarity=0.043 Sum_probs=139.1
Q ss_pred CCCceeEEEEeecCcEE-EEEe-CCeEEEEeCCCCEEEEeecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEE
Q psy9936 50 VMEEVYDIKWLHLETMF-AVAQ-KDWVYIYDNQGIELHCLKVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSD 127 (315)
Q Consensus 50 ~~~~v~~~~~~~~~~~l-~~~~-~~~i~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~ 127 (315)
.........|+|+++.| .+.. ++.|..|+.++...........+..++++++|+++++...++.|.+|+.. ++....
T Consensus 43 ~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~ 121 (305)
T 3dr2_A 43 QATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLL 121 (305)
T ss_dssp CCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSCEEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEE
T ss_pred CCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCCEEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEE
Confidence 44556789999999844 4443 68999999865533333345678999999999977776667889999986 553322
Q ss_pred eccC----CCCeEEEEEcCCCCEEEE----EcC-------------CCeEEEEcCCCCcceeEeecccccEEEEEECCCC
Q psy9936 128 FSAK----KGKLSVMTQNPYNACICL----GHR-------------NGTVTMWSPTVQKPLASLLCHKAGIQSVAVNHTG 186 (315)
Q Consensus 128 ~~~~----~~~v~~~~~~p~~~~l~~----~~~-------------d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g 186 (315)
.... ...++.++++|+|+++++ |.. .+.|..||..+++..... .....+.++|+|++
T Consensus 122 ~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg 199 (305)
T 3dr2_A 122 VGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDE 199 (305)
T ss_dssp ECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTS
T ss_pred EeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCC
Confidence 2111 124677999999998876 332 357888888777644332 34567889999999
Q ss_pred CEEEEeeCC------CcEEEEEccCCCCCeeE---ec--cCCCceeEEEccCCeEEEEcCCEEEecCC------------
Q psy9936 187 TYMATSAGD------SQLRIWDVRNLEGPLNT---FR--TRTPINNLAFSQRGLLATSRGNIVEFLKP------------ 243 (315)
Q Consensus 187 ~~l~~~~~d------~~i~iwd~~~~~~~~~~---~~--~~~~v~~~~~s~~g~~~~~~~~~i~~~~~------------ 243 (315)
+.|+.+... +.|.+|++... . +.. +. ....+..++++++|.+.++..+.|..|++
T Consensus 200 ~~lyv~~~~~~~~~~~~i~~~~~~~~-~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~gv~~~~~~g~~~~~~~~~~ 277 (305)
T 3dr2_A 200 QTLYVSQTPEQGHGSVEITAFAWRDG-A-LHDRRHFASVPDGLPDGFCVDRGGWLWSSSGTGVCVFDSDGQLLGHIPTPG 277 (305)
T ss_dssp SEEEEEECCC---CCCEEEEEEEETT-E-EEEEEEEECCSSSCCCSEEECTTSCEEECCSSEEEEECTTSCEEEEEECSS
T ss_pred CEEEEEecCCcCCCCCEEEEEEecCC-C-ccCCeEEEECCCCCCCeEEECCCCCEEEecCCcEEEECCCCCEEEEEECCC
Confidence 988777665 68999998764 3 211 11 12236789999999755555556777766
Q ss_pred --CceeecccccccccCCc
Q psy9936 244 --PEINFEPRRKANKAGGS 260 (315)
Q Consensus 244 --~~~~~~~~~~~~~~~~~ 260 (315)
..++|+|+++.|..++.
T Consensus 278 ~~~~~~f~~d~~~L~it~~ 296 (305)
T 3dr2_A 278 TASNCTFDQAQQRLFITGG 296 (305)
T ss_dssp CCCEEEECTTSCEEEEEET
T ss_pred ceeEEEEeCCCCEEEEEcC
Confidence 45667777665544433
No 217
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.52 E-value=7.5e-12 Score=107.98 Aligned_cols=210 Identities=13% Similarity=0.066 Sum_probs=139.1
Q ss_pred EEEEcCCCCEEEEEc----------CCCeEEEEEccCceEEEEecCC--------CceeEEEEeecCcEEEEEe---CCe
Q psy9936 15 RMNYTKNGRHLLLGG----------KRGHVAAFDWVRKTLACEMNVM--------EEVYDIKWLHLETMFAVAQ---KDW 73 (315)
Q Consensus 15 ~~~~s~~~~~l~~~~----------~dg~i~v~~~~~~~~~~~~~~~--------~~v~~~~~~~~~~~l~~~~---~~~ 73 (315)
.++++|||++++++. .++.|.++|..+++....+... .....+.|+|||+++.++. ++.
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 899999999888765 3578999999999988877532 3456899999999988875 468
Q ss_pred EEEEeCCCCEE-EEeecCCc--------eEEEEEcCCCc-------------------------------------eEEE
Q psy9936 74 VYIYDNQGIEL-HCLKVLNK--------VTRMEFLPYHF-------------------------------------LLAT 107 (315)
Q Consensus 74 i~i~~~~~~~~-~~~~~~~~--------v~~~~~~~~~~-------------------------------------~l~~ 107 (315)
|.+.|+....+ ..+..... -..+.++++|. .++.
T Consensus 202 VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~ 281 (426)
T 3c75_H 202 VGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVW 281 (426)
T ss_dssp EEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEE
Confidence 99999965433 33332110 01123333333 3333
Q ss_pred EcCCCeEEEEEccCCeEE--EEecc----------CCCCeEEEEEcCCCCEEEEEcC----------CCeEEEEcCCCCc
Q psy9936 108 ASEEGYLSWLDTSIGKIV--SDFSA----------KKGKLSVMTQNPYNACICLGHR----------NGTVTMWSPTVQK 165 (315)
Q Consensus 108 ~~~d~~i~~~d~~~~~~~--~~~~~----------~~~~v~~~~~~p~~~~l~~~~~----------d~~i~i~d~~~~~ 165 (315)
.+..+.+.+.|+...... ..+.. .......++++|+++.+++... ++.|.++|+.+.+
T Consensus 282 ~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~k 361 (426)
T 3c75_H 282 PTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGE 361 (426)
T ss_dssp EBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCC
T ss_pred EeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCe
Confidence 334455556665433211 00100 0111223689999887776542 3589999999999
Q ss_pred ceeEeecccccEEEEEECCCCC-EEEEee-CCCcEEEEEccCCCCCeeEe-ccCCCceeEEEccC
Q psy9936 166 PLASLLCHKAGIQSVAVNHTGT-YMATSA-GDSQLRIWDVRNLEGPLNTF-RTRTPINNLAFSQR 227 (315)
Q Consensus 166 ~~~~~~~~~~~i~~~~~sp~g~-~l~~~~-~d~~i~iwd~~~~~~~~~~~-~~~~~v~~~~~s~~ 227 (315)
.+.++.. .....+++|+|||+ +++++. .++.|.++|+.++ +.+..+ ....... +..+||
T Consensus 362 vv~~I~v-g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~-kvv~tI~~vG~~P~-~i~~~~ 423 (426)
T 3c75_H 362 RINKIEL-GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATG-EELRSVDQLGRGPQ-IITTHD 423 (426)
T ss_dssp EEEEEEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTC-CEEEEECCCSSSCC-EEECCC
T ss_pred EEEEEEC-CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCC-CEEEEecCCCCCCc-EEEcCC
Confidence 9998873 33578999999999 888887 5899999999999 888887 3333222 555554
No 218
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.52 E-value=3.5e-12 Score=110.02 Aligned_cols=222 Identities=10% Similarity=0.013 Sum_probs=146.8
Q ss_pred CCCCEEEEEcC-C----CeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEe-----------CCeEEEEeCCC-C
Q psy9936 20 KNGRHLLLGGK-R----GHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQ-----------KDWVYIYDNQG-I 82 (315)
Q Consensus 20 ~~~~~l~~~~~-d----g~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----------~~~i~i~~~~~-~ 82 (315)
|+++.+++... + +.|.++|..+++.+..+...... .+.++||++.+.++. ++.|.++|..+ +
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~ 160 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL 160 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc
Confidence 56676655543 2 69999999999999988844334 899999998777664 46899999954 4
Q ss_pred EEEEeecC--------CceEEEEEcCCCceEEEEcC--CCeEEEEEccCCeEEEEeccCCC-------CeEEEEEcCCCC
Q psy9936 83 ELHCLKVL--------NKVTRMEFLPYHFLLATASE--EGYLSWLDTSIGKIVSDFSAKKG-------KLSVMTQNPYNA 145 (315)
Q Consensus 83 ~~~~~~~~--------~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~~~-------~v~~~~~~p~~~ 145 (315)
.+..+... .....+.++|||++++++.. ++.|.++|+.+++.+..+..... .-..+.++++|+
T Consensus 161 vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~ 240 (426)
T 3c75_H 161 PIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGS 240 (426)
T ss_dssp EEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSS
T ss_pred EEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCC
Confidence 44444321 34567899999999998864 57899999999988777653211 001133444444
Q ss_pred EEEE-------------------------------------EcCCCeEEEEcCCCCcc--eeEeec----------cccc
Q psy9936 146 CICL-------------------------------------GHRNGTVTMWSPTVQKP--LASLLC----------HKAG 176 (315)
Q Consensus 146 ~l~~-------------------------------------~~~d~~i~i~d~~~~~~--~~~~~~----------~~~~ 176 (315)
+++. .+..+.+.+.|+.+... +..+.- ....
T Consensus 241 ~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g 320 (426)
T 3c75_H 241 LARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGG 320 (426)
T ss_dssp EEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECS
T ss_pred EEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCC
Confidence 3333 33334455555433211 011100 0011
Q ss_pred EEEEEECCCCCEEEEeeC----------CCcEEEEEccCCCCCeeEeccCCCceeEEEccCCe--EEEE--cCCEEEecC
Q psy9936 177 IQSVAVNHTGTYMATSAG----------DSQLRIWDVRNLEGPLNTFRTRTPINNLAFSQRGL--LATS--RGNIVEFLK 242 (315)
Q Consensus 177 i~~~~~sp~g~~l~~~~~----------d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~--~~~~--~~~~i~~~~ 242 (315)
...++++|++..+++... ++.|.++|+.+. +.+..+........+.|+|||. +.++ .++.|.+++
T Consensus 321 ~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~-kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID 399 (426)
T 3c75_H 321 WQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETG-ERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYD 399 (426)
T ss_dssp SSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTC-CEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEE
T ss_pred ceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCC-eEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEE
Confidence 122689999887766542 357999999999 8999888777799999999985 3333 378999888
Q ss_pred C
Q psy9936 243 P 243 (315)
Q Consensus 243 ~ 243 (315)
.
T Consensus 400 ~ 400 (426)
T 3c75_H 400 A 400 (426)
T ss_dssp T
T ss_pred C
Confidence 7
No 219
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.51 E-value=9.8e-13 Score=111.64 Aligned_cols=207 Identities=11% Similarity=0.029 Sum_probs=139.9
Q ss_pred EEEEcCCCCEEEEEc----------CCCeEEEEEccCceEEEEecCC--------CceeEEEEeecCcEEEEEe---CCe
Q psy9936 15 RMNYTKNGRHLLLGG----------KRGHVAAFDWVRKTLACEMNVM--------EEVYDIKWLHLETMFAVAQ---KDW 73 (315)
Q Consensus 15 ~~~~s~~~~~l~~~~----------~dg~i~v~~~~~~~~~~~~~~~--------~~v~~~~~~~~~~~l~~~~---~~~ 73 (315)
.+.++|||++++++. .++.|.+||+.+++....+... .....+.++|||++++++. .+.
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~ 148 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA 148 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence 799999999888775 3678999999999999887632 3467899999999888875 357
Q ss_pred EEE--EeCCCCEEEEeecCCc--------eEEEEE-------------------------------------cCCCceEE
Q psy9936 74 VYI--YDNQGIELHCLKVLNK--------VTRMEF-------------------------------------LPYHFLLA 106 (315)
Q Consensus 74 i~i--~~~~~~~~~~~~~~~~--------v~~~~~-------------------------------------~~~~~~l~ 106 (315)
+.+ +|+.. +..+..... -..+.+ ++++..++
T Consensus 149 v~V~~iD~~t--v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~ 226 (368)
T 1mda_H 149 AGLSVPGASD--DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLV 226 (368)
T ss_dssp EEEEETTTEE--EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEE
T ss_pred EEEEEEchhh--ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEE
Confidence 888 88744 222221100 000111 22222333
Q ss_pred EEcCCCeEEEEEccCCe--EEEEecc-------C---CCCeEEEEEcCCCCEEEEEcC---------CCeEEEEcCCCCc
Q psy9936 107 TASEEGYLSWLDTSIGK--IVSDFSA-------K---KGKLSVMTQNPYNACICLGHR---------NGTVTMWSPTVQK 165 (315)
Q Consensus 107 ~~~~d~~i~~~d~~~~~--~~~~~~~-------~---~~~v~~~~~~p~~~~l~~~~~---------d~~i~i~d~~~~~ 165 (315)
..+. +.+.+.|+..+. .+..+.. + ......++++|+++.++++.. ++.+.++|+.+.+
T Consensus 227 ~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~ 305 (368)
T 1mda_H 227 WAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ 305 (368)
T ss_dssp ECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCC
T ss_pred EEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCe
Confidence 3333 566666765322 2222211 0 011122689999998876533 2356699999999
Q ss_pred ceeEeecccccEEEEEECCCCC-EEEEee-CCCcEEEEEccCCCCCeeEeccCCCceeEEEcc
Q psy9936 166 PLASLLCHKAGIQSVAVNHTGT-YMATSA-GDSQLRIWDVRNLEGPLNTFRTRTPINNLAFSQ 226 (315)
Q Consensus 166 ~~~~~~~~~~~i~~~~~sp~g~-~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~ 226 (315)
.+..+... .....++|+|||+ .++++. .++.|.++|+.++ +.+..+........+++.+
T Consensus 306 vv~~i~vg-~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~-kvv~~I~vg~~P~~i~~~~ 366 (368)
T 1mda_H 306 TSGPISNG-HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASD-QDQSSVELDKGPESLSVQN 366 (368)
T ss_dssp EEECCEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEESSSC-EEEEECCCCSCCCEEECCC
T ss_pred EEEEEECC-CCcceEEECCCCCEEEEEccCCCCeEEEEECCCC-cEEEEEECCCCCCEEEeec
Confidence 88888743 3678999999998 566666 5899999999999 9999998887778887765
No 220
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.50 E-value=1e-11 Score=105.34 Aligned_cols=211 Identities=15% Similarity=0.084 Sum_probs=146.4
Q ss_pred cEEEEEEcCCCCEEEEEcC--CCeEEEEEccCceEEEEecCCCceeEEEEeecC-cEEEEEeCCeEEEEeCCC--CEEEE
Q psy9936 12 GIYRMNYTKNGRHLLLGGK--RGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLE-TMFAVAQKDWVYIYDNQG--IELHC 86 (315)
Q Consensus 12 ~v~~~~~s~~~~~l~~~~~--dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~i~i~~~~~--~~~~~ 86 (315)
....++|+|||++++++.. ++.|.++|+.+++.+..+...+. ...+.... .+++.+.||.+.+.++.. .....
T Consensus 138 ~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~ 215 (386)
T 3sjl_D 138 YPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEIT 215 (386)
T ss_dssp CGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE--EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEE
T ss_pred CCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc--ceeecCCCceeEEECCCCCEEEEECCCCCeEEEe
Confidence 3456899999998887753 68899999999999988865442 12222233 344555688888888743 32221
Q ss_pred ee-cC----CceE-EEEEc-CCCceEEEEcCCCeEEEEEccCCe--EEEEec----------cCCCCeEEEEEcCCCCEE
Q psy9936 87 LK-VL----NKVT-RMEFL-PYHFLLATASEEGYLSWLDTSIGK--IVSDFS----------AKKGKLSVMTQNPYNACI 147 (315)
Q Consensus 87 ~~-~~----~~v~-~~~~~-~~~~~l~~~~~d~~i~~~d~~~~~--~~~~~~----------~~~~~v~~~~~~p~~~~l 147 (315)
.. .. .++. ...|. ++|++++ .+.+|.+++.|+.++. ....+. ...+....++++|+++.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~l 294 (386)
T 3sjl_D 216 HTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRI 294 (386)
T ss_dssp ECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEE
T ss_pred ecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeE
Confidence 11 11 2222 24564 6775554 5568999999997553 222221 012233457789999987
Q ss_pred EEEcC----------CCeEEEEcCCCCcceeEeecccccEEEEEECCCCC-EEEEe-eCCCcEEEEEccCCCCCeeEecc
Q psy9936 148 CLGHR----------NGTVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGT-YMATS-AGDSQLRIWDVRNLEGPLNTFRT 215 (315)
Q Consensus 148 ~~~~~----------d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~-~l~~~-~~d~~i~iwd~~~~~~~~~~~~~ 215 (315)
+.... .+.|.++|+.+++.+..+.. ...+.+++++||++ +|+++ ..++.|.++|..++ +.+..+..
T Consensus 295 yV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v-g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~-k~~~~i~~ 372 (386)
T 3sjl_D 295 YLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESG-EELRSVNQ 372 (386)
T ss_dssp EEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECSSSSCEEEEEETTTTEEEEEETTTC-CEEEEECC
T ss_pred EEEeccccccccCCCCCEEEEEECCCCeEEEEEEC-CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCC-cEEEEecC
Confidence 77642 25799999999999988873 34778999999997 66664 45889999999999 99999988
Q ss_pred CCCceeEEEccC
Q psy9936 216 RTPINNLAFSQR 227 (315)
Q Consensus 216 ~~~v~~~~~s~~ 227 (315)
....+.+.+++|
T Consensus 373 ~~~p~~l~~s~d 384 (386)
T 3sjl_D 373 LGHGPQVITTAD 384 (386)
T ss_dssp CCSSCCEEEECC
T ss_pred CCCCceeEECCc
Confidence 887888888887
No 221
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.48 E-value=6.6e-11 Score=95.29 Aligned_cols=193 Identities=11% Similarity=0.039 Sum_probs=137.6
Q ss_pred cEEEEEEcCCCCEEEEEcC--CCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEe--CCeEEEEeCCC-CEEEE
Q psy9936 12 GIYRMNYTKNGRHLLLGGK--RGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQ--KDWVYIYDNQG-IELHC 86 (315)
Q Consensus 12 ~v~~~~~s~~~~~l~~~~~--dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~~~~~-~~~~~ 86 (315)
....++|+|++.++++.+. ++.|+++|+.+++.+..+..........+..++..|..+. ++.+.++|..+ +.+..
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~ 101 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKN 101 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEE
Confidence 4689999998755554443 5789999999999988876444333333444455555554 78999999865 44445
Q ss_pred eecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCC-----CCeEEEEEcCCCCEEEEEcCCCeEEEEcC
Q psy9936 87 LKVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKK-----GKLSVMTQNPYNACICLGHRNGTVTMWSP 161 (315)
Q Consensus 87 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-----~~v~~~~~~p~~~~l~~~~~d~~i~i~d~ 161 (315)
+... ......++++|+.++++..++.|.++|..+.+.+..+.... ..++.+.|. +|..++....++.|.+.|.
T Consensus 102 i~~g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~ 179 (266)
T 2iwa_A 102 FTHQ-MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISA 179 (266)
T ss_dssp EECC-SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEET
T ss_pred EECC-CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEEC
Confidence 5433 11234466788877777778899999999988887765322 236788888 7766666656889999999
Q ss_pred CCCcceeEeeccc-------------ccEEEEEECCCCC-EEEEeeCCCcEEEEEccCC
Q psy9936 162 TVQKPLASLLCHK-------------AGIQSVAVNHTGT-YMATSAGDSQLRIWDVRNL 206 (315)
Q Consensus 162 ~~~~~~~~~~~~~-------------~~i~~~~~sp~g~-~l~~~~~d~~i~iwd~~~~ 206 (315)
.+++.+..+.... ...+.|+|+|+++ +++++...+.+.+.++...
T Consensus 180 ~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 180 KDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp TTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 9999888886321 2568999999986 4556667788999888765
No 222
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.46 E-value=3.6e-11 Score=104.17 Aligned_cols=185 Identities=9% Similarity=0.017 Sum_probs=133.3
Q ss_pred EEEcCCCCEEEEEcCCC--eEEEEEccCceEEEEe----c-CCCceeEEEEee-cCcEEEEEeCCeEEEEeCCCCEEEEe
Q psy9936 16 MNYTKNGRHLLLGGKRG--HVAAFDWVRKTLACEM----N-VMEEVYDIKWLH-LETMFAVAQKDWVYIYDNQGIELHCL 87 (315)
Q Consensus 16 ~~~s~~~~~l~~~~~dg--~i~v~~~~~~~~~~~~----~-~~~~v~~~~~~~-~~~~l~~~~~~~i~i~~~~~~~~~~~ 87 (315)
++|+|+++.|+++..++ .|.+++..++.....+ . ....+.+++++| ++.++++..++.|+.||..+.....+
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 89999999888887755 7999988765543333 2 345678999999 56666644468899999976554444
Q ss_pred e----c-C-Cc-eE-EEEEcCC-CceEEEEcCCCeEEEEEccCCeEEEEeccCC---------------CCeEEEEEcCC
Q psy9936 88 K----V-L-NK-VT-RMEFLPY-HFLLATASEEGYLSWLDTSIGKIVSDFSAKK---------------GKLSVMTQNPY 143 (315)
Q Consensus 88 ~----~-~-~~-v~-~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~---------------~~v~~~~~~p~ 143 (315)
. . . .. .. .++|+|+ +.++++-..++.|+.|+.... +..+.++. .....++++|+
T Consensus 256 ~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~d 333 (409)
T 3hrp_A 256 KQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDED 333 (409)
T ss_dssp EECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTT
T ss_pred ecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCC
Confidence 1 1 1 11 13 9999995 666666677889999997633 22332222 34789999999
Q ss_pred CCEEEEEc-CCCeEEEEcCCCCcceeEeecc---------------cccEEEEEECCCCCEEEEeeCCCcEEEEEc
Q psy9936 144 NACICLGH-RNGTVTMWSPTVQKPLASLLCH---------------KAGIQSVAVNHTGTYMATSAGDSQLRIWDV 203 (315)
Q Consensus 144 ~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~---------------~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~ 203 (315)
|+++++-. .++.|+.||+.++. +..+.++ -..+..++++|+|.++++-..++.|+.+++
T Consensus 334 G~lyvad~~~~~~I~~~~~~~G~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 334 GNFYIVDGFKGYCLRKLDILDGY-VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CCEEEEETTTTCEEEEEETTTTE-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCEEEEeCCCCCEEEEEECCCCE-EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 99777777 88999999987775 4444443 245789999999888888888888988775
No 223
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.44 E-value=4.7e-14 Score=120.71 Aligned_cols=200 Identities=14% Similarity=0.100 Sum_probs=119.5
Q ss_pred CCCEEEEEcCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEE-eCCeEEEEeC-CCCEEEEeecC--CceE-E
Q psy9936 21 NGRHLLLGGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVA-QKDWVYIYDN-QGIELHCLKVL--NKVT-R 95 (315)
Q Consensus 21 ~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~~~-~~~~~~~~~~~--~~v~-~ 95 (315)
++..+++++.||.|+.||..+|+.+..+.. +.+.+..+.+++.+++++ .|+.|+.||. +++.+...... ..+. +
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~s 86 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQAS 86 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccC
Confidence 567899999999999999999999888776 666666666777666664 5899999998 45444333321 1110 1
Q ss_pred EEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCeEEEEcCCCCcceeEeecccc
Q psy9936 96 MEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNGTVTMWSPTVQKPLASLLCHKA 175 (315)
Q Consensus 96 ~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 175 (315)
..+. .+..+++++.++.++.||..+|+.+..+..+. ...++|++..+++++.++.|..||.++++.+..+..+.
T Consensus 87 p~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~- 160 (369)
T 2hz6_A 87 PCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD- 160 (369)
T ss_dssp SCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE-
T ss_pred ceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc-
Confidence 1111 34567788889999999999999887776543 23456788899999999999999999998877765321
Q ss_pred cEEEEEECCCC---CEEEEeeCCCcEEEEEccCCCCCeeEeccCCCc-eeEEEccCCe
Q psy9936 176 GIQSVAVNHTG---TYMATSAGDSQLRIWDVRNLEGPLNTFRTRTPI-NNLAFSQRGL 229 (315)
Q Consensus 176 ~i~~~~~sp~g---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v-~~~~~s~~g~ 229 (315)
.....++++. ..+++++.||.+..||..++ +.+.......++ ....++++|.
T Consensus 161 -~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG-~~~W~~~~~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 161 -YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESG-DVLWIQNYASPVVAFYVWQREGL 216 (369)
T ss_dssp -ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTC-CEEEEEECSSCEEEEEECTTSSC
T ss_pred -ccCccccCCccccceEEEECCCCEEEEEECCCC-cEEEEecCCCceEEEEEecCCce
Confidence 1233344432 45777889999999999998 777777766665 3456667775
No 224
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.39 E-value=1.7e-10 Score=98.83 Aligned_cols=215 Identities=9% Similarity=0.060 Sum_probs=142.1
Q ss_pred CCCCEEEE-EcCCCeEEEEEccCc----eEEEEec--------CCCceeEEEEeecCcEEEEE-eC------CeEEEEeC
Q psy9936 20 KNGRHLLL-GGKRGHVAAFDWVRK----TLACEMN--------VMEEVYDIKWLHLETMFAVA-QK------DWVYIYDN 79 (315)
Q Consensus 20 ~~~~~l~~-~~~dg~i~v~~~~~~----~~~~~~~--------~~~~v~~~~~~~~~~~l~~~-~~------~~i~i~~~ 79 (315)
+++++|++ +..++.|+|+|+.+. +...+++ .......+..+|+| +++++ ++ +.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 77887765 556788999998755 5666662 11245567788999 55443 23 68999998
Q ss_pred CC-CEEEEeecC----CceEEEEEcCCCceEEEEc-------------------CCCeEEEEEccCCeEEEEeccCC--C
Q psy9936 80 QG-IELHCLKVL----NKVTRMEFLPYHFLLATAS-------------------EEGYLSWLDTSIGKIVSDFSAKK--G 133 (315)
Q Consensus 80 ~~-~~~~~~~~~----~~v~~~~~~~~~~~l~~~~-------------------~d~~i~~~d~~~~~~~~~~~~~~--~ 133 (315)
.+ +.+..+... ...+.+.|+|+++.+++.. ...+|.+||+.+++.+.++.... .
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 65 444444322 2234688899999888884 36789999999998888876531 2
Q ss_pred CeEEEEE--cCCCCEEEEEc------CCCeEEEEcCCCCc--ceeEe--ec----------------ccccEEEEEECCC
Q psy9936 134 KLSVMTQ--NPYNACICLGH------RNGTVTMWSPTVQK--PLASL--LC----------------HKAGIQSVAVNHT 185 (315)
Q Consensus 134 ~v~~~~~--~p~~~~l~~~~------~d~~i~i~d~~~~~--~~~~~--~~----------------~~~~i~~~~~sp~ 185 (315)
....+.| +|+++++++++ .+++|.+|..+.++ ..+.+ .. -...+..|.+|||
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D 331 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD 331 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCC
Confidence 3445655 99999887776 45688776554332 11111 10 0234678999999
Q ss_pred CCEEEEeeC-CCcEEEEEccCCC--CCeeEeccCC---------------CceeEEEccCCeEEEEcC
Q psy9936 186 GTYMATSAG-DSQLRIWDVRNLE--GPLNTFRTRT---------------PINNLAFSQRGLLATSRG 235 (315)
Q Consensus 186 g~~l~~~~~-d~~i~iwd~~~~~--~~~~~~~~~~---------------~v~~~~~s~~g~~~~~~~ 235 (315)
|++|+++.. .+.|.+||+.... +.+..+.... ....++++|||.++...+
T Consensus 332 GrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 332 DKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp SCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 999887764 6789999986331 3444444331 368999999996443333
No 225
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.39 E-value=1.6e-10 Score=102.23 Aligned_cols=217 Identities=7% Similarity=-0.011 Sum_probs=152.4
Q ss_pred EEEEcCCCeEEEEEccCceEEEEecC----------------------------------------CCceeEEEEee---
Q psy9936 25 LLLGGKRGHVAAFDWVRKTLACEMNV----------------------------------------MEEVYDIKWLH--- 61 (315)
Q Consensus 25 l~~~~~dg~i~v~~~~~~~~~~~~~~----------------------------------------~~~v~~~~~~~--- 61 (315)
+.+|+..|.++|+-+.+++.+..+.. .+.......|.
T Consensus 18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~g 97 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG 97 (595)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEETT
T ss_pred EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCCC
Confidence 45778889999999988876654420 01122345554
Q ss_pred --cCcEEEEEe--CCeEEEEeCCCCEE-E--EeecCCceEEEEE-c-CCCceEEEEc------------------CCCeE
Q psy9936 62 --LETMFAVAQ--KDWVYIYDNQGIEL-H--CLKVLNKVTRMEF-L-PYHFLLATAS------------------EEGYL 114 (315)
Q Consensus 62 --~~~~l~~~~--~~~i~i~~~~~~~~-~--~~~~~~~v~~~~~-~-~~~~~l~~~~------------------~d~~i 114 (315)
||+++.+.. ++.|.+.|+...+. . .+.....+..+++ + |++.++++++ .++.+
T Consensus 98 ~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~v 177 (595)
T 1fwx_A 98 KYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF 177 (595)
T ss_dssp EEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred CcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceE
Confidence 788888776 56799999976553 2 3334466888888 5 9999988884 34579
Q ss_pred EEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCC--------------------------------------eE
Q psy9936 115 SWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNG--------------------------------------TV 156 (315)
Q Consensus 115 ~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~--------------------------------------~i 156 (315)
.++|..+.+.+.++.... ....++++|+|+++++.+.+. .|
T Consensus 178 tvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V 256 (595)
T 1fwx_A 178 TAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 256 (595)
T ss_dssp EEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred EEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence 999999998888876433 346688999999988887542 47
Q ss_pred EEEcCCC--Ccc-eeEeecccccEEEEEECCCCCEEEEee-CCCcEEEEEccCCC-----------CCeeEeccCCCcee
Q psy9936 157 TMWSPTV--QKP-LASLLCHKAGIQSVAVNHTGTYMATSA-GDSQLRIWDVRNLE-----------GPLNTFRTRTPINN 221 (315)
Q Consensus 157 ~i~d~~~--~~~-~~~~~~~~~~i~~~~~sp~g~~l~~~~-~d~~i~iwd~~~~~-----------~~~~~~~~~~~v~~ 221 (315)
.+.|.++ ++. +..+.. .....++.++|||+++++++ .+.+|.++|+.+.. ..+..+....+...
T Consensus 257 ~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h 335 (595)
T 1fwx_A 257 KVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLH 335 (595)
T ss_dssp EEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEE
T ss_pred EEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcce
Confidence 7778776 444 445543 33557899999999877665 67799999998641 12344555567899
Q ss_pred EEEccCCe-EEEE-cCCEEEecCC
Q psy9936 222 LAFSQRGL-LATS-RGNIVEFLKP 243 (315)
Q Consensus 222 ~~~s~~g~-~~~~-~~~~i~~~~~ 243 (315)
++|+|+|. |++. .++.|..|+.
T Consensus 336 ~aF~~dG~aY~t~~ldsqV~kwdi 359 (595)
T 1fwx_A 336 TAFDGRGNAYTSLFLDSQVVKWNI 359 (595)
T ss_dssp EEECTTSEEEEEETTTTEEEEEEH
T ss_pred EEECCCCeEEEEEecCCcEEEEEh
Confidence 99999994 3333 4788876654
No 226
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.38 E-value=3.2e-11 Score=106.62 Aligned_cols=210 Identities=12% Similarity=0.041 Sum_probs=146.2
Q ss_pred CCCEEEEEcC-CCeEEEEEccCceEEEEec--CCCceeEEEE-e-ecCcEEEEEe-------------------CCeEEE
Q psy9936 21 NGRHLLLGGK-RGHVAAFDWVRKTLACEMN--VMEEVYDIKW-L-HLETMFAVAQ-------------------KDWVYI 76 (315)
Q Consensus 21 ~~~~l~~~~~-dg~i~v~~~~~~~~~~~~~--~~~~v~~~~~-~-~~~~~l~~~~-------------------~~~i~i 76 (315)
||+++.+... ++.|.+.|+.+.+....+. .......+++ + |++.++.+++ ++.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 8887776554 5679999999999877444 4456888888 4 8998888873 247888
Q ss_pred EeCCCCEE-EEeecCCceEEEEEcCCCceEEEEcCCC--------------------------------------eEEEE
Q psy9936 77 YDNQGIEL-HCLKVLNKVTRMEFLPYHFLLATASEEG--------------------------------------YLSWL 117 (315)
Q Consensus 77 ~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~--------------------------------------~i~~~ 117 (315)
.|.++.++ ..+.-.+....++++|+|+++++.+.+. .|.+.
T Consensus 180 ID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VI 259 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVV 259 (595)
T ss_dssp EETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEE
T ss_pred EECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEE
Confidence 99866443 3444434556788999999998887553 36666
Q ss_pred EccC--CeE-EEEeccCCCCeEEEEEcCCCCEEEEEc-CCCeEEEEcCCCCc------------ceeEeecccccEEEEE
Q psy9936 118 DTSI--GKI-VSDFSAKKGKLSVMTQNPYNACICLGH-RNGTVTMWSPTVQK------------PLASLLCHKAGIQSVA 181 (315)
Q Consensus 118 d~~~--~~~-~~~~~~~~~~v~~~~~~p~~~~l~~~~-~d~~i~i~d~~~~~------------~~~~~~~~~~~i~~~~ 181 (315)
|..+ ++. +..+... ....++.++|||+++++++ .+.+|.++|+.+.+ .+.++. -......++
T Consensus 260 D~~~~~~~~~~~~Ipvg-~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~a 337 (595)
T 1fwx_A 260 DGRKEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTA 337 (595)
T ss_dssp ECSGGGCCSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEE
T ss_pred eCcccCCceeEEEEecC-CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceEE
Confidence 7665 433 3444322 2356789999999777665 57899999998653 223333 335678999
Q ss_pred ECCCCCEEEEeeCCCcEEEEEccC----------CCCCeeEeccCCCc------eeEEEccCCeEEEE
Q psy9936 182 VNHTGTYMATSAGDSQLRIWDVRN----------LEGPLNTFRTRTPI------NNLAFSQRGLLATS 233 (315)
Q Consensus 182 ~sp~g~~l~~~~~d~~i~iwd~~~----------~~~~~~~~~~~~~v------~~~~~s~~g~~~~~ 233 (315)
|+|+|...++.-.|++|.+||+.. . ..+..+..+..+ ..+.++|||+++.+
T Consensus 338 F~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~-~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~ 404 (595)
T 1fwx_A 338 FDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVD-PIKDKLDVHYQPGHLKTVMGETLDATNDWLVC 404 (595)
T ss_dssp ECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCC-CEEEEEECSSCEEEEEETTTTSTTCCSSEEEE
T ss_pred ECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccc-eeEEEeecccccccceeccceEeCCCCCEEEE
Confidence 999994444556799999999987 3 566666666543 34466899965544
No 227
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.38 E-value=3e-10 Score=91.42 Aligned_cols=194 Identities=11% Similarity=-0.009 Sum_probs=134.7
Q ss_pred ceEEEEecCCCc--eeEEEEeecCcEEEEEe---CCeEEEEeCC-CCEEEEeecCC--ceEEEEEcCCCceE-EEEcCCC
Q psy9936 42 KTLACEMNVMEE--VYDIKWLHLETMFAVAQ---KDWVYIYDNQ-GIELHCLKVLN--KVTRMEFLPYHFLL-ATASEEG 112 (315)
Q Consensus 42 ~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~---~~~i~i~~~~-~~~~~~~~~~~--~v~~~~~~~~~~~l-~~~~~d~ 112 (315)
.+.+.++.|... ...+.|++++.++++++ ++.|.++|+. ++.+..+.... ....+++. +..| ++.-.++
T Consensus 9 ~~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~ 86 (266)
T 2iwa_A 9 VEVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKN 86 (266)
T ss_dssp EEEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCS
T ss_pred ceEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCC
Confidence 455667776643 57999999886666654 4799999995 45444444322 23345554 4444 4445678
Q ss_pred eEEEEEccCCeEEEEeccC-CCCeEEEEEcCCCCEEEEEcCCCeEEEEcCCCCcceeEeeccc-----ccEEEEEECCCC
Q psy9936 113 YLSWLDTSIGKIVSDFSAK-KGKLSVMTQNPYNACICLGHRNGTVTMWSPTVQKPLASLLCHK-----AGIQSVAVNHTG 186 (315)
Q Consensus 113 ~i~~~d~~~~~~~~~~~~~-~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-----~~i~~~~~sp~g 186 (315)
.+.++|..+.+.+.++... .. ...+++||+.++++..++.|.++|..+.+.+..+.... ..++.+.|. +|
T Consensus 87 ~v~viD~~t~~v~~~i~~g~~~---g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg 162 (266)
T 2iwa_A 87 IGFIYDRRTLSNIKNFTHQMKD---GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NG 162 (266)
T ss_dssp EEEEEETTTTEEEEEEECCSSS---CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT
T ss_pred EEEEEECCCCcEEEEEECCCCC---eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CC
Confidence 9999999999998888643 22 23456688877777778999999999988888776321 236788888 77
Q ss_pred CEEEEeeCCCcEEEEEccCCCCCeeEeccC--------------CCceeEEEccCC-eEEEEc--CCEEEecC
Q psy9936 187 TYMATSAGDSQLRIWDVRNLEGPLNTFRTR--------------TPINNLAFSQRG-LLATSR--GNIVEFLK 242 (315)
Q Consensus 187 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--------------~~v~~~~~s~~g-~~~~~~--~~~i~~~~ 242 (315)
..++....++.|.+.|..++ +.+..+... ...+.++|+|++ ++.+++ .+.+...+
T Consensus 163 ~lyvn~~~~~~V~vID~~tg-~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~ 234 (266)
T 2iwa_A 163 EVWANIWQTDCIARISAKDG-TLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIK 234 (266)
T ss_dssp EEEEEETTSSEEEEEETTTC-CEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEE
T ss_pred EEEEecCCCCeEEEEECCCC-cEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEE
Confidence 65555556789999999999 888887643 135899999998 444443 45555444
No 228
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.37 E-value=7.3e-10 Score=94.87 Aligned_cols=226 Identities=12% Similarity=0.123 Sum_probs=148.6
Q ss_pred eEEEEEccC-----ceEEEEecCC---CceeEEEE-----------e--ecCcEEEEEe--CCeEEEEeCCCC-----EE
Q psy9936 33 HVAAFDWVR-----KTLACEMNVM---EEVYDIKW-----------L--HLETMFAVAQ--KDWVYIYDNQGI-----EL 84 (315)
Q Consensus 33 ~i~v~~~~~-----~~~~~~~~~~---~~v~~~~~-----------~--~~~~~l~~~~--~~~i~i~~~~~~-----~~ 84 (315)
.|.+.|++. ++.+..+... .....+.| + +++++|.+.+ ++.|+++|+... ..
T Consensus 44 ~la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~ 123 (462)
T 2ece_A 44 FIAVVDVNPKSETYSKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKII 123 (462)
T ss_dssp EEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEE
T ss_pred eEEEEECCCCCCCcceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEccCCCCeEEEEECCCCCCCceee
Confidence 467777765 5665554411 13444445 6 7888888876 689999998432 22
Q ss_pred EEee-------cC-CceEEEEEcCCCceEEEEcCC------CeEEEEEccCCeEEEEeccCCC---CeEEEEEcCCCCEE
Q psy9936 85 HCLK-------VL-NKVTRMEFLPYHFLLATASEE------GYLSWLDTSIGKIVSDFSAKKG---KLSVMTQNPYNACI 147 (315)
Q Consensus 85 ~~~~-------~~-~~v~~~~~~~~~~~l~~~~~d------~~i~~~d~~~~~~~~~~~~~~~---~v~~~~~~p~~~~l 147 (315)
..+. .. .....+.++|+| +++++..+ |.|.++|..+.+.+.++..... ..+.+.|+|+++.+
T Consensus 124 k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~m 202 (462)
T 2ece_A 124 KVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVL 202 (462)
T ss_dssp EEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEE
T ss_pred eeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEE
Confidence 3331 11 245667889999 66665544 7899999999999988863222 24457889999988
Q ss_pred EEEc-------------------CCCeEEEEcCCCCcceeEeecc--cccEEEEEE--CCCCCEEEEee------CCCcE
Q psy9936 148 CLGH-------------------RNGTVTMWSPTVQKPLASLLCH--KAGIQSVAV--NHTGTYMATSA------GDSQL 198 (315)
Q Consensus 148 ~~~~-------------------~d~~i~i~d~~~~~~~~~~~~~--~~~i~~~~~--sp~g~~l~~~~------~d~~i 198 (315)
++.. ...+|.+||+.+++.+.++... ......+.| +|+++++++++ .+++|
T Consensus 203 vsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V 282 (462)
T 2ece_A 203 VSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSI 282 (462)
T ss_dssp EECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEE
T ss_pred EEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceE
Confidence 8874 3689999999998888877642 134456666 99999888776 56678
Q ss_pred EEEEccCCC-CCeeEe--cc-----------------CCCceeEEEccCCe--EEEE-cCCEEEecC-------------
Q psy9936 199 RIWDVRNLE-GPLNTF--RT-----------------RTPINNLAFSQRGL--LATS-RGNIVEFLK------------- 242 (315)
Q Consensus 199 ~iwd~~~~~-~~~~~~--~~-----------------~~~v~~~~~s~~g~--~~~~-~~~~i~~~~------------- 242 (315)
.+|....+. ...+.+ .. ...+..+.+||||+ |++. +.+.|.+++
T Consensus 283 ~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I 362 (462)
T 2ece_A 283 WLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKV 362 (462)
T ss_dssp EEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEE
T ss_pred EEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEE
Confidence 776654320 001110 00 23478999999995 3333 356776433
Q ss_pred --------------------CCceeecccccccccCC
Q psy9936 243 --------------------PPEINFEPRRKANKAGG 259 (315)
Q Consensus 243 --------------------~~~~~~~~~~~~~~~~~ 259 (315)
|..+.++|||+++..+.
T Consensus 363 ~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 363 KLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp ECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 46677888888776665
No 229
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.36 E-value=3.2e-09 Score=86.35 Aligned_cols=213 Identities=9% Similarity=-0.016 Sum_probs=139.7
Q ss_pred cEEEEEEcCCCCEEE-EEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe--CCeEEEEeCCCCEEEEe
Q psy9936 12 GIYRMNYTKNGRHLL-LGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ--KDWVYIYDNQGIELHCL 87 (315)
Q Consensus 12 ~v~~~~~s~~~~~l~-~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~--~~~i~i~~~~~~~~~~~ 87 (315)
.+.+++|+|++..|+ +....+.|.+++..+......+. .......+++.+++..|..+. .+.|.++++++.....+
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~ 116 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVL 116 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEE
Confidence 456899999766555 44557899999987765443333 225678999999755555443 57899999976543333
Q ss_pred e--cCCceEEEEEcCCCceEEEEcC---CCeEEEEEccCCeEEEEe-ccCCCCeEEEEEcCCCCEEEE-EcCCCeEEEEc
Q psy9936 88 K--VLNKVTRMEFLPYHFLLATASE---EGYLSWLDTSIGKIVSDF-SAKKGKLSVMTQNPYNACICL-GHRNGTVTMWS 160 (315)
Q Consensus 88 ~--~~~~v~~~~~~~~~~~l~~~~~---d~~i~~~d~~~~~~~~~~-~~~~~~v~~~~~~p~~~~l~~-~~~d~~i~i~d 160 (315)
. .......++++|++..|+.+.. .+.|..+++... ....+ .........++++|++..|+. ....+.|.++|
T Consensus 117 ~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~ 195 (267)
T 1npe_A 117 FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLN 195 (267)
T ss_dssp ECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEe
Confidence 2 2256789999997655555543 468888887633 22222 223345789999998765554 45568999999
Q ss_pred CCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC--CceeEEEccCC
Q psy9936 161 PTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT--PINNLAFSQRG 228 (315)
Q Consensus 161 ~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~--~v~~~~~s~~g 228 (315)
+........+.. ......++.. .+.++++....+.|.++|..++ +.+..+.... ....+++.|++
T Consensus 196 ~~g~~~~~~~~~-~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g-~~~~~i~~g~~~~p~gi~~~~~~ 262 (267)
T 1npe_A 196 PAQPGRRKVLEG-LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAIS-KEMDTFHPHKQTRLYGITIALSQ 262 (267)
T ss_dssp TTEEEEEEEEEC-CCSEEEEEEE-TTEEEEEETTTTEEEEEETTTT-EEEEEECCSSCCCCCCEEEECSC
T ss_pred cCCCceEEEecC-CCCceEEEEe-CCEEEEEECCCCeEEEEeCCCC-CceEEEccccccccceeeecCcc
Confidence 985443333332 2334566654 3434444445678999999988 7777776543 47888888876
No 230
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.36 E-value=5.9e-11 Score=100.70 Aligned_cols=207 Identities=9% Similarity=-0.084 Sum_probs=134.0
Q ss_pred eEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEe-----------CCeEEEEeCC-CCEEEEeecC--------Cc
Q psy9936 33 HVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQ-----------KDWVYIYDNQ-GIELHCLKVL--------NK 92 (315)
Q Consensus 33 ~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----------~~~i~i~~~~-~~~~~~~~~~--------~~ 92 (315)
.|.++|..+++.+..+...... .+.++||++.+.++. ++.|.+||+. .+.+..+... ..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~ 125 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPR 125 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCC
T ss_pred eEEEEECCCCeEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCC
Confidence 7889999999999988833333 899999998888775 5789999995 4555555432 34
Q ss_pred eEEEEEcCCCceEEEEcC--CCeEEE--EEccCCeEEEEeccCCC-------CeEEEEE---------------------
Q psy9936 93 VTRMEFLPYHFLLATASE--EGYLSW--LDTSIGKIVSDFSAKKG-------KLSVMTQ--------------------- 140 (315)
Q Consensus 93 v~~~~~~~~~~~l~~~~~--d~~i~~--~d~~~~~~~~~~~~~~~-------~v~~~~~--------------------- 140 (315)
...++++|||++++++.. ...+.+ +|+.+ +..+..... .-.-+++
T Consensus 126 P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v 202 (368)
T 1mda_H 126 VHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIV 202 (368)
T ss_dssp TTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEEC
T ss_pred cceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeE
Confidence 668999999999998864 456888 88865 222211000 0000111
Q ss_pred ----------------cCCCCEEEEEcCCCeEEEEcCCCCc--ceeEeec-------cc---ccEEEEEECCCCCEEEEe
Q psy9936 141 ----------------NPYNACICLGHRNGTVTMWSPTVQK--PLASLLC-------HK---AGIQSVAVNHTGTYMATS 192 (315)
Q Consensus 141 ----------------~p~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~-------~~---~~i~~~~~sp~g~~l~~~ 192 (315)
.+++..++..+. +.+.+.|+.+.. .+..+.. +. .....++++|+++.++++
T Consensus 203 ~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~ 281 (368)
T 1mda_H 203 GAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMIL 281 (368)
T ss_dssp CCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEE
T ss_pred EEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEE
Confidence 222333333333 566666765432 1111110 00 111126899999988765
Q ss_pred eC---------CCcEEEEEccCCCCCeeEeccCCCceeEEEccCCe--EEEEc--CCEEEecCCCc
Q psy9936 193 AG---------DSQLRIWDVRNLEGPLNTFRTRTPINNLAFSQRGL--LATSR--GNIVEFLKPPE 245 (315)
Q Consensus 193 ~~---------d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~--~~~~~--~~~i~~~~~~~ 245 (315)
.. ++.+.++|+.+. +.+..+........++|+|||. +++.. +++|.+++...
T Consensus 282 ~~~~~~~~~~~~~~~~ViD~~t~-~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 282 TVEHSRSCLAAAENTSSVTASVG-QTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp EEECSSCTTSCEEEEEEEESSSC-CEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSS
T ss_pred eccccCcccccCCCEEEEECCCC-eEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCC
Confidence 43 235669999998 8888888777799999999993 45554 79999988733
No 231
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.34 E-value=1.7e-10 Score=97.68 Aligned_cols=191 Identities=9% Similarity=-0.016 Sum_probs=127.6
Q ss_pred CcEEEEEEcCCCCEEEEEcC-----CCeEEEEEccCceEEEEecCC-------CceeEEEEeec-CcEEEEE----eCCe
Q psy9936 11 FGIYRMNYTKNGRHLLLGGK-----RGHVAAFDWVRKTLACEMNVM-------EEVYDIKWLHL-ETMFAVA----QKDW 73 (315)
Q Consensus 11 ~~v~~~~~s~~~~~l~~~~~-----dg~i~v~~~~~~~~~~~~~~~-------~~v~~~~~~~~-~~~l~~~----~~~~ 73 (315)
..+.+++++++|+++++... ++.|.+||+.+++.+..+... ..+..+++.++ +..+++. .++.
T Consensus 67 ~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~ 146 (343)
T 2qe8_A 67 DTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAA 146 (343)
T ss_dssp SCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCE
T ss_pred eEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCe
Confidence 57899999999987665543 478999999999876665421 24688999986 4444443 3578
Q ss_pred EEEEeCCC-CEEEEeec------------------------------CCceEEEEEcCCCceEEEEcCCC-eEEEEEcc-
Q psy9936 74 VYIYDNQG-IELHCLKV------------------------------LNKVTRMEFLPYHFLLATASEEG-YLSWLDTS- 120 (315)
Q Consensus 74 i~i~~~~~-~~~~~~~~------------------------------~~~v~~~~~~~~~~~l~~~~~d~-~i~~~d~~- 120 (315)
|.+||+.+ .....+.. ...+..++|+|+++.|+++...+ .+..++..
T Consensus 147 i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~ 226 (343)
T 2qe8_A 147 LIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSAD 226 (343)
T ss_dssp EEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHH
T ss_pred EEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHH
Confidence 99999854 33332211 02357899999998888876655 56556542
Q ss_pred --CCe-----EEE--EeccCCCCeEEEEEcCCCCEEEEEcCCCeEEEEcCCCCcceeEeec-ccccEEEEEECCCCCEEE
Q psy9936 121 --IGK-----IVS--DFSAKKGKLSVMTQNPYNACICLGHRNGTVTMWSPTVQKPLASLLC-HKAGIQSVAVNHTGTYMA 190 (315)
Q Consensus 121 --~~~-----~~~--~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~i~~~~~sp~g~~l~ 190 (315)
.+. ... ...++.+....++++++|+++++...++.|.+||..+++....... +...+.+++|.++|.+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v 306 (343)
T 2qe8_A 227 LSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYF 306 (343)
T ss_dssp HTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEE
T ss_pred hcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEE
Confidence 110 000 1112333456799999999999988899999999855653322221 245688999999998888
Q ss_pred EeeCCCcEEEE
Q psy9936 191 TSAGDSQLRIW 201 (315)
Q Consensus 191 ~~~~d~~i~iw 201 (315)
+.+..+.+.+|
T Consensus 307 ~~~~~~~~~~f 317 (343)
T 2qe8_A 307 DCNQLHHSAPL 317 (343)
T ss_dssp EECCGGGSGGG
T ss_pred EeCcccccccc
Confidence 87655554433
No 232
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.33 E-value=4.3e-10 Score=103.57 Aligned_cols=222 Identities=13% Similarity=0.105 Sum_probs=151.3
Q ss_pred CCCEEEEEcCCCeEEEEEccCceEEEEecCC------CceeEEEEeecCcEEEEEe------CCeEEEEeC-CCCEEEEe
Q psy9936 21 NGRHLLLGGKRGHVAAFDWVRKTLACEMNVM------EEVYDIKWLHLETMFAVAQ------KDWVYIYDN-QGIELHCL 87 (315)
Q Consensus 21 ~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~------~~v~~~~~~~~~~~l~~~~------~~~i~i~~~-~~~~~~~~ 87 (315)
++..|++++.++.|..+|..+|+.+..+... ..+...-...++.+++.+. ++.|+.+|. +++.+..+
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEe
Confidence 3567888888999999999999998877633 1222211223555555443 589999998 45655544
Q ss_pred ecCCc---------------------------------eEEEEEcCCCceEEEEcCCC-------------------eEE
Q psy9936 88 KVLNK---------------------------------VTRMEFLPYHFLLATASEEG-------------------YLS 115 (315)
Q Consensus 88 ~~~~~---------------------------------v~~~~~~~~~~~l~~~~~d~-------------------~i~ 115 (315)
..... ...++++|++..++.++.++ .|.
T Consensus 207 ~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~ 286 (677)
T 1kb0_A 207 FSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIV 286 (677)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred ccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEE
Confidence 32111 13578889888888887664 599
Q ss_pred EEEccCCeEEEEecc--CC-------CCeEEEEEcCCC---CEEEEEcCCCeEEEEcCCCCcceeEeeccc---------
Q psy9936 116 WLDTSIGKIVSDFSA--KK-------GKLSVMTQNPYN---ACICLGHRNGTVTMWSPTVQKPLASLLCHK--------- 174 (315)
Q Consensus 116 ~~d~~~~~~~~~~~~--~~-------~~v~~~~~~p~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--------- 174 (315)
.+|..+|+.+-.++. |. .....+....+| ..++.++.+|.+.++|.++++.+..+....
T Consensus 287 AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~ 366 (677)
T 1kb0_A 287 ALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDK 366 (677)
T ss_dssp EECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECT
T ss_pred EEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCC
Confidence 999999998877653 21 112223344477 688999999999999999999877654211
Q ss_pred --ccE------------------------EEEEECCCCCEEEEeeC----------------------------------
Q psy9936 175 --AGI------------------------QSVAVNHTGTYMATSAG---------------------------------- 194 (315)
Q Consensus 175 --~~i------------------------~~~~~sp~g~~l~~~~~---------------------------------- 194 (315)
.++ ..++++|++.++++...
T Consensus 367 ~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~ 446 (677)
T 1kb0_A 367 HGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFF 446 (677)
T ss_dssp TSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEE
T ss_pred CCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccccccc
Confidence 011 14688898887777543
Q ss_pred ---------CCcEEEEEccCCCCCeeEeccCCCceeEEEccCC-e-EEEEcCCEEEecCC
Q psy9936 195 ---------DSQLRIWDVRNLEGPLNTFRTRTPINNLAFSQRG-L-LATSRGNIVEFLKP 243 (315)
Q Consensus 195 ---------d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g-~-~~~~~~~~i~~~~~ 243 (315)
.+.|..||+.++ +.+..+....++....++.++ + ++++.++.++.|+.
T Consensus 447 ~~~~~~~~~~g~l~A~D~~tG-~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~ 505 (677)
T 1kb0_A 447 NAEPPKSKPFGRLLAWDPVAQ-KAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHA 505 (677)
T ss_dssp CSSCCCSCCEEEEEEEETTTT-EEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEET
T ss_pred ccccCCCCCccEEEEEeCCCC-cEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEEC
Confidence 267999999998 777777766666665566554 3 55567899997765
No 233
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.32 E-value=9.1e-09 Score=86.12 Aligned_cols=228 Identities=11% Similarity=0.067 Sum_probs=148.8
Q ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec--------------------CCCceeEEEEee-cCcEEEEE
Q psy9936 11 FGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN--------------------VMEEVYDIKWLH-LETMFAVA 69 (315)
Q Consensus 11 ~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~--------------------~~~~v~~~~~~~-~~~~l~~~ 69 (315)
..+.+++++++|++++++..++.|..|+..++....... ....+..+++.+ +++++++.
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d 98 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD 98 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE
Confidence 456789999999878888888999999987765432211 013478899997 77777766
Q ss_pred eCCeEEEEeCCCCEEEEeec------CCceEEEEEcC-CCceEEEEcC-----------------CCeEEEEEccCCeEE
Q psy9936 70 QKDWVYIYDNQGIELHCLKV------LNKVTRMEFLP-YHFLLATASE-----------------EGYLSWLDTSIGKIV 125 (315)
Q Consensus 70 ~~~~i~i~~~~~~~~~~~~~------~~~v~~~~~~~-~~~~l~~~~~-----------------d~~i~~~d~~~~~~~ 125 (315)
..+.|..+|..+..+..+.. ......+++.+ +|.+.++... ++.|..||..+++..
T Consensus 99 ~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 178 (322)
T 2fp8_A 99 CYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETT 178 (322)
T ss_dssp TTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEE
T ss_pred CCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEE
Confidence 66668888887554433321 23578899999 8876665432 367889998766543
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEE-cCCCeEEEEcCCCCc--ceeEeecccccEEEEEECCCCCEEEEeeC--------
Q psy9936 126 SDFSAKKGKLSVMTQNPYNACICLG-HRNGTVTMWSPTVQK--PLASLLCHKAGIQSVAVNHTGTYMATSAG-------- 194 (315)
Q Consensus 126 ~~~~~~~~~v~~~~~~p~~~~l~~~-~~d~~i~i~d~~~~~--~~~~~~~~~~~i~~~~~sp~g~~l~~~~~-------- 194 (315)
.... .......++++|+|+.|+++ ...+.|.+|++.... ....+....+ ...+++.++|+++++...
T Consensus 179 ~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~ 256 (322)
T 2fp8_A 179 LLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHG 256 (322)
T ss_dssp EEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTS
T ss_pred Eecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccC
Confidence 3222 12335679999999866555 556899999987532 1222221223 788999999987666544
Q ss_pred --CCcEEEEEccCCCCCeeEeccCC-----CceeEEEccCCe-EEEE-cCCEEEecCC
Q psy9936 195 --DSQLRIWDVRNLEGPLNTFRTRT-----PINNLAFSQRGL-LATS-RGNIVEFLKP 243 (315)
Q Consensus 195 --d~~i~iwd~~~~~~~~~~~~~~~-----~v~~~~~s~~g~-~~~~-~~~~i~~~~~ 243 (315)
.+.|..+|.. + +.+..+.... .+..+++ .++. ++++ ..+.|..+++
T Consensus 257 ~~~~~v~~~d~~-G-~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~ 311 (322)
T 2fp8_A 257 RVDPKGIKFDEF-G-NILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVY 311 (322)
T ss_dssp CEEEEEEEECTT-S-CEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC
T ss_pred CCccEEEEECCC-C-CEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEec
Confidence 4568888864 4 6666665432 3566766 4564 4444 4566766553
No 234
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.32 E-value=1.5e-09 Score=86.42 Aligned_cols=181 Identities=8% Similarity=0.020 Sum_probs=129.1
Q ss_pred CcEEEEEEcCCCCEEEEEcCCC--eEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEe--CCeEEEEeCC-CCEEE
Q psy9936 11 FGIYRMNYTKNGRHLLLGGKRG--HVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQ--KDWVYIYDNQ-GIELH 85 (315)
Q Consensus 11 ~~v~~~~~s~~~~~l~~~~~dg--~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~~~~-~~~~~ 85 (315)
.-...+.|+ ++.++.+.+.+| .|+++|+.+++.+..+............+++..|.... ++.+.+||.. .+.+.
T Consensus 43 ~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ 121 (262)
T 3nol_A 43 AFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVR 121 (262)
T ss_dssp CEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred cccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEE
Confidence 334788898 666666666655 89999999999998887655555544445555555544 8899999995 45555
Q ss_pred EeecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCC-----CCeEEEEEcCCCCEEEEEcCCCeEEEEc
Q psy9936 86 CLKVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKK-----GKLSVMTQNPYNACICLGHRNGTVTMWS 160 (315)
Q Consensus 86 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-----~~v~~~~~~p~~~~l~~~~~d~~i~i~d 160 (315)
.+.....- ..+++++..|+.+..++.|.++|..+.+.+..+.... ..++.+.|. +|..++..-.+..|.+.|
T Consensus 122 ti~~~~eG--~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vID 198 (262)
T 3nol_A 122 SFNYDGEG--WGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRID 198 (262)
T ss_dssp EEECSSCC--CCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEC
T ss_pred EEECCCCc--eEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEE
Confidence 66654322 3344667777777667889999999998888765421 335667776 777666666788999999
Q ss_pred CCCCcceeEeecc------------cccEEEEEECCCCCEEEEeeCC
Q psy9936 161 PTVQKPLASLLCH------------KAGIQSVAVNHTGTYMATSAGD 195 (315)
Q Consensus 161 ~~~~~~~~~~~~~------------~~~i~~~~~sp~g~~l~~~~~d 195 (315)
..+++.+..+... ..-.+.|+|+|+++.|++.+..
T Consensus 199 p~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 199 PETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp TTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred CCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 9999988777631 1356899999998877666654
No 235
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.30 E-value=2.8e-10 Score=105.36 Aligned_cols=187 Identities=12% Similarity=0.081 Sum_probs=121.7
Q ss_pred CceeEEEEeecCcEEEEEe--C----CeEEEEeCCCCEEEEeecCC-ceEEEEEcCCCceEEEEcCCC------------
Q psy9936 52 EEVYDIKWLHLETMFAVAQ--K----DWVYIYDNQGIELHCLKVLN-KVTRMEFLPYHFLLATASEEG------------ 112 (315)
Q Consensus 52 ~~v~~~~~~~~~~~l~~~~--~----~~i~i~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~------------ 112 (315)
..+..++|||||++|+.+. . ..|++||+.+.+........ ....++|+ |++.|+.++.+.
T Consensus 129 ~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~ 207 (693)
T 3iuj_A 129 TALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQ 207 (693)
T ss_dssp CEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------CCC
T ss_pred EEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccCCC
Confidence 3578889999999998654 2 37999999765543322111 13578899 999888887764
Q ss_pred -eEEEEEccCCe----EEEEecc-CCCCeEEEEEcCCCCEEEEEc----CCCeEEEEcCCCCc-ceeEeecccccEEEEE
Q psy9936 113 -YLSWLDTSIGK----IVSDFSA-KKGKLSVMTQNPYNACICLGH----RNGTVTMWSPTVQK-PLASLLCHKAGIQSVA 181 (315)
Q Consensus 113 -~i~~~d~~~~~----~~~~~~~-~~~~v~~~~~~p~~~~l~~~~----~d~~i~i~d~~~~~-~~~~~~~~~~~i~~~~ 181 (315)
.|++|++.++. .+..... |......+.|+|||++|+... .+..|.++|+.++. ....+..+.......
T Consensus 208 ~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~- 286 (693)
T 3iuj_A 208 HKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL- 286 (693)
T ss_dssp CEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-
T ss_pred cEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-
Confidence 39999987764 2333333 445578899999999876543 23589999998763 455666566655555
Q ss_pred ECCCCCEEEEee-CC---CcEEEEEccCCCCC--eeEeccCC-CceeEEEccCCe-E-EEEc-CC--EEEecCC
Q psy9936 182 VNHTGTYMATSA-GD---SQLRIWDVRNLEGP--LNTFRTRT-PINNLAFSQRGL-L-ATSR-GN--IVEFLKP 243 (315)
Q Consensus 182 ~sp~g~~l~~~~-~d---~~i~iwd~~~~~~~--~~~~~~~~-~v~~~~~s~~g~-~-~~~~-~~--~i~~~~~ 243 (315)
|+++|..|+..+ .+ +.|..+|+.++ .. ...+..+. .+. .|++++. + +... ++ .|.+|++
T Consensus 287 ~~~~g~~l~~~t~~~~~~~~l~~~d~~~~-~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~ 357 (693)
T 3iuj_A 287 VDNKGSTLYLLTNRDAPNRRLVTVDAANP-GPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDY 357 (693)
T ss_dssp EEEETTEEEEEECTTCTTCEEEEEETTSC-CGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECT
T ss_pred EeccCCEEEEEECCCCCCCEEEEEeCCCC-CccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEEC
Confidence 667776555444 33 57999999876 43 23444443 343 8888883 2 2222 33 5666654
No 236
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.28 E-value=2.2e-09 Score=85.50 Aligned_cols=187 Identities=7% Similarity=0.036 Sum_probs=128.2
Q ss_pred eEEEEecCCCc--eeEEEEeecCcEEEEEe-CC--eEEEEeCC-CCEEEEeecCCceEEEEEcCCCceEEEE-cCCCeEE
Q psy9936 43 TLACEMNVMEE--VYDIKWLHLETMFAVAQ-KD--WVYIYDNQ-GIELHCLKVLNKVTRMEFLPYHFLLATA-SEEGYLS 115 (315)
Q Consensus 43 ~~~~~~~~~~~--v~~~~~~~~~~~l~~~~-~~--~i~i~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~ 115 (315)
+.+.++.|... ...+.|+ ++.++.+++ +| .|+.+|+. ++.+..+............+++..|+.. -.++.+.
T Consensus 32 ~vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~ 110 (262)
T 3nol_A 32 QIVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGF 110 (262)
T ss_dssp EEEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEE
T ss_pred EEEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEE
Confidence 45666776654 4788998 666665554 44 89999995 4555555544444443333445555554 4578999
Q ss_pred EEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCeEEEEcCCCCcceeEeecc--c---ccEEEEEECCCCCEEE
Q psy9936 116 WLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNGTVTMWSPTVQKPLASLLCH--K---AGIQSVAVNHTGTYMA 190 (315)
Q Consensus 116 ~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~---~~i~~~~~sp~g~~l~ 190 (315)
+||..+.+.+.++..... ...+.+++..|+.+..++.|.++|..+.+.+..+... . ..++.+.|. +|+.++
T Consensus 111 v~D~~t~~~~~ti~~~~e---G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lya 186 (262)
T 3nol_A 111 VWNIRNLRQVRSFNYDGE---GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFA 186 (262)
T ss_dssp EEETTTCCEEEEEECSSC---CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEE
T ss_pred EEECccCcEEEEEECCCC---ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEE
Confidence 999999999998875332 2333467777777766889999999999888877632 1 334567776 777666
Q ss_pred EeeCCCcEEEEEccCCCCCeeEeccC-------------CCceeEEEccCC-eEEEEcC
Q psy9936 191 TSAGDSQLRIWDVRNLEGPLNTFRTR-------------TPINNLAFSQRG-LLATSRG 235 (315)
Q Consensus 191 ~~~~d~~i~iwd~~~~~~~~~~~~~~-------------~~v~~~~~s~~g-~~~~~~~ 235 (315)
..-.++.|.+.|.+++ +.+..+... ...+.|+|+|++ ++.+++.
T Consensus 187 n~w~~~~I~vIDp~tG-~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 187 NVWQTNKIVRIDPETG-KVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EETTSSEEEEECTTTC-BEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EEccCCeEEEEECCCC-cEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 6657889999999998 877777542 124889999986 4555553
No 237
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.28 E-value=2.2e-09 Score=99.11 Aligned_cols=234 Identities=13% Similarity=0.115 Sum_probs=154.2
Q ss_pred CCEEEEEcCCCeEEEEEccCceEEEEecCC-C-----ceeEEEEeecCcEEEEEe------CCeEEEEeCC-CCEEEEee
Q psy9936 22 GRHLLLGGKRGHVAAFDWVRKTLACEMNVM-E-----EVYDIKWLHLETMFAVAQ------KDWVYIYDNQ-GIELHCLK 88 (315)
Q Consensus 22 ~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~-~-----~v~~~~~~~~~~~l~~~~------~~~i~i~~~~-~~~~~~~~ 88 (315)
+..|++++.|+.|+.+|..+|+.+..+... . .+.+.-...++.+++... ++.|+.||.. ++.+..+.
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 457888888999999999999988776532 1 121111112565555432 5789999984 55554443
Q ss_pred cC--C------------------------------ceEEEEEcCCCceEEEEcCCCe-------------------EEEE
Q psy9936 89 VL--N------------------------------KVTRMEFLPYHFLLATASEEGY-------------------LSWL 117 (315)
Q Consensus 89 ~~--~------------------------------~v~~~~~~~~~~~l~~~~~d~~-------------------i~~~ 117 (315)
.. . ....++++|++.+++.++.++. |..+
T Consensus 201 ~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~Al 280 (689)
T 1yiq_A 201 TVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAV 280 (689)
T ss_dssp SSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEE
T ss_pred ccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 11 0 0125788898888999887764 9999
Q ss_pred EccCCeEEEEecc--CC-------CCeEEEEEcCCCC---EEEEEcCCCeEEEEcCCCCcceeEeeccc-ccE-------
Q psy9936 118 DTSIGKIVSDFSA--KK-------GKLSVMTQNPYNA---CICLGHRNGTVTMWSPTVQKPLASLLCHK-AGI------- 177 (315)
Q Consensus 118 d~~~~~~~~~~~~--~~-------~~v~~~~~~p~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~i------- 177 (315)
|..+|+.+-.++. |. ..+.......+|+ .++.++.+|.+.++|.++++.+....... .+.
T Consensus 281 D~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~ 360 (689)
T 1yiq_A 281 NADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKT 360 (689)
T ss_dssp ETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTT
T ss_pred EccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccC
Confidence 9999998887654 21 1122222233565 78889999999999999998874332100 000
Q ss_pred -------------------------------EEEEECCCCCEEEEeeC--------------------------------
Q psy9936 178 -------------------------------QSVAVNHTGTYMATSAG-------------------------------- 194 (315)
Q Consensus 178 -------------------------------~~~~~sp~g~~l~~~~~-------------------------------- 194 (315)
..++++|+..++++...
T Consensus 361 ~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p 440 (689)
T 1yiq_A 361 GRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMP 440 (689)
T ss_dssp TEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCC
T ss_pred CCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccC
Confidence 12688888777776532
Q ss_pred -------------CCcEEEEEccCCCCCeeEeccCCCceeEEEccC-Ce-EEEEcCCEEEecCC----------------
Q psy9936 195 -------------DSQLRIWDVRNLEGPLNTFRTRTPINNLAFSQR-GL-LATSRGNIVEFLKP---------------- 243 (315)
Q Consensus 195 -------------d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~-g~-~~~~~~~~i~~~~~---------------- 243 (315)
+|.|..||+.++ +.+..+..+.+.....++.. ++ ++++.|+.++.|+.
T Consensus 441 ~~~~~~~~~~~~~~g~l~A~D~~tG-~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~ 519 (689)
T 1yiq_A 441 EGAEGLLEMAKSWSGKLIAWDPVKQ-QAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVM 519 (689)
T ss_dssp SSHHHHHHHHTTCEEEEEEEETTTT-EEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC
T ss_pred cccccCCCCCCCcceeEEEEECCCC-CeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcc
Confidence 377999999999 88877777665554455444 44 55667899997765
Q ss_pred -Cceeecccccccc
Q psy9936 244 -PEINFEPRRKANK 256 (315)
Q Consensus 244 -~~~~~~~~~~~~~ 256 (315)
.-+.|+.+|+..+
T Consensus 520 ~~p~ty~~~G~qyv 533 (689)
T 1yiq_A 520 AAPVTYSVDGEQYV 533 (689)
T ss_dssp SCCEEEEETTEEEE
T ss_pred cCceEEEECCEEEE
Confidence 4466667776443
No 238
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.27 E-value=1.2e-09 Score=100.55 Aligned_cols=200 Identities=17% Similarity=0.152 Sum_probs=140.7
Q ss_pred CCeEEEEEccCceEEEEecCCCce---------------------------------eEEEEeecCcEEEEEe-CC----
Q psy9936 31 RGHVAAFDWVRKTLACEMNVMEEV---------------------------------YDIKWLHLETMFAVAQ-KD---- 72 (315)
Q Consensus 31 dg~i~v~~~~~~~~~~~~~~~~~v---------------------------------~~~~~~~~~~~l~~~~-~~---- 72 (315)
+|.|+.+|..+|+.+..+...... ..+++.|++.++.++. ++
T Consensus 189 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~ 268 (677)
T 1kb0_A 189 RGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWS 268 (677)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred CCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCcccc
Confidence 689999999999988776522111 2467788777776664 32
Q ss_pred ---------------eEEEEeCC-CCEEEEeec--C--------CceEEEEEcCCC---ceEEEEcCCCeEEEEEccCCe
Q psy9936 73 ---------------WVYIYDNQ-GIELHCLKV--L--------NKVTRMEFLPYH---FLLATASEEGYLSWLDTSIGK 123 (315)
Q Consensus 73 ---------------~i~i~~~~-~~~~~~~~~--~--------~~v~~~~~~~~~---~~l~~~~~d~~i~~~d~~~~~ 123 (315)
.|..+|.. ++.+..+.. + .....+....+| ..++.++.+|.++++|..+|+
T Consensus 269 ~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~ 348 (677)
T 1kb0_A 269 HKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGK 348 (677)
T ss_dssp HHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred CCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCC
Confidence 48899985 454444332 1 122223334467 688999999999999999999
Q ss_pred EEEEeccCCC----------C-e------------------------EEEEEcCCCCEEEEEcC----------------
Q psy9936 124 IVSDFSAKKG----------K-L------------------------SVMTQNPYNACICLGHR---------------- 152 (315)
Q Consensus 124 ~~~~~~~~~~----------~-v------------------------~~~~~~p~~~~l~~~~~---------------- 152 (315)
.+..+..... . + ..++++|++.++++...
T Consensus 349 ~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~ 428 (677)
T 1kb0_A 349 FISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQ 428 (677)
T ss_dssp EEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTC
T ss_pred EeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccc
Confidence 8876542210 0 1 14688998887776532
Q ss_pred ---------------------------CCeEEEEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccC
Q psy9936 153 ---------------------------NGTVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRN 205 (315)
Q Consensus 153 ---------------------------d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~ 205 (315)
.+.|..||+.+++.+.++. +..++....++.++.++++++.|+.+++||.++
T Consensus 429 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~t 507 (677)
T 1kb0_A 429 AGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAAT 507 (677)
T ss_dssp CCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred ccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCC
Confidence 2789999999999888776 444455556667888889999999999999999
Q ss_pred CCCCeeEeccCCC--ceeEEEccCCe-EEE
Q psy9936 206 LEGPLNTFRTRTP--INNLAFSQRGL-LAT 232 (315)
Q Consensus 206 ~~~~~~~~~~~~~--v~~~~~s~~g~-~~~ 232 (315)
+ +.+..+....+ ..-+.|.++|. +++
T Consensus 508 G-~~lw~~~~~~~~~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 508 G-EKLWEAPTGTGVVAAPSTYMVDGRQYVS 536 (677)
T ss_dssp C-CEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred C-ceeeeeeCCCCcccCCEEEEeCCEEEEE
Confidence 9 89988876654 35567778884 443
No 239
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.27 E-value=2.5e-08 Score=81.02 Aligned_cols=219 Identities=11% Similarity=0.023 Sum_probs=134.3
Q ss_pred CCEEEEEcCCCeEEEEEccCceEE-----EEec-CCCceeEEEEeecCcEEEEEe--CCeEEEEeCCCCEEEEee--cCC
Q psy9936 22 GRHLLLGGKRGHVAAFDWVRKTLA-----CEMN-VMEEVYDIKWLHLETMFAVAQ--KDWVYIYDNQGIELHCLK--VLN 91 (315)
Q Consensus 22 ~~~l~~~~~dg~i~v~~~~~~~~~-----~~~~-~~~~v~~~~~~~~~~~l~~~~--~~~i~i~~~~~~~~~~~~--~~~ 91 (315)
|.+|+.+. .+.|+.++++..... ..+. ....+..++|.+++..|..+. .+.|..+++++.....+. ...
T Consensus 1 ~~~l~~~~-~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~ 79 (267)
T 1npe_A 1 GTHLLFAQ-TGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLG 79 (267)
T ss_dssp CEEEEEEE-EEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCC
T ss_pred CcEEEEEc-CCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCC
Confidence 34555554 357888888765421 1121 123567899999765555554 679999999765443332 225
Q ss_pred ceEEEEEcCCCc-eEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcC---CCeEEEEcCCCCcce
Q psy9936 92 KVTRMEFLPYHF-LLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHR---NGTVTMWSPTVQKPL 167 (315)
Q Consensus 92 ~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~---d~~i~i~d~~~~~~~ 167 (315)
....++++|++. ++++-...+.|.++++..................++++|++..|+.+.. .+.|..++++.. ..
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~~ 158 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-NR 158 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-CC
T ss_pred CccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-Cc
Confidence 788999999755 4445556788999998743322222222246789999997665555543 468888887643 33
Q ss_pred eEee-cccccEEEEEECCCCCEEEEe-eCCCcEEEEEccCCCCCeeEeccCCCceeEEEccCCeEEEEc-CCEEEecCC
Q psy9936 168 ASLL-CHKAGIQSVAVNHTGTYMATS-AGDSQLRIWDVRNLEGPLNTFRTRTPINNLAFSQRGLLATSR-GNIVEFLKP 243 (315)
Q Consensus 168 ~~~~-~~~~~i~~~~~sp~g~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~~~~~-~~~i~~~~~ 243 (315)
..+. ........++++|++..|+.+ ...+.|.++|.... .....+........++...+.++++.. ++.|..+++
T Consensus 159 ~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~-~~~~~~~~~~~P~gi~~d~~~lyva~~~~~~v~~~d~ 236 (267)
T 1npe_A 159 RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP-GRRKVLEGLQYPFAVTSYGKNLYYTDWKTNSVIAMDL 236 (267)
T ss_dssp EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE-EEEEEEECCCSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred EEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC-ceEEEecCCCCceEEEEeCCEEEEEECCCCeEEEEeC
Confidence 3332 223467899999987766555 45678999998764 333333322334667665333455543 567776554
No 240
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.24 E-value=1.4e-09 Score=91.04 Aligned_cols=211 Identities=13% Similarity=0.039 Sum_probs=142.4
Q ss_pred CCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEeCCeEEEEeCCCCEEEEeecC-CceEEEEEc
Q psy9936 22 GRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQKDWVYIYDNQGIELHCLKVL-NKVTRMEFL 99 (315)
Q Consensus 22 ~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~-~~v~~~~~~ 99 (315)
+..|.+++.++.|..+|.. ++...... ....+.++...+++.+++.+.++.|..+|..+......... ..+.++...
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~d 185 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIYVGSNDNYLYAINPDGTEKWRFKTNDAITSAASIG 185 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEEEECTTSEEEEECTTSCEEEEEECSSCCCSCCEEC
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEEEEcCCCEEEEECCCCCEeEEEecCCCceeeeEEc
Confidence 4466777778889999988 66655554 33445666777788877766678999999886555444432 455667777
Q ss_pred CCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCeEEEEcCCCCcceeEeecccccEEE
Q psy9936 100 PYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNGTVTMWSPTVQKPLASLLCHKAGIQS 179 (315)
Q Consensus 100 ~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~ 179 (315)
+++.++ .++ +.+..+| .+++....+......+.++...++|.+ ..++.++.+..+|. +++.+..+......+..
T Consensus 186 ~~g~l~-v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l-~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~ 259 (330)
T 3hxj_A 186 KDGTIY-FGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTI-YVTSLDGHLYAINP-DGTEKWRFKTGKRIESS 259 (330)
T ss_dssp TTCCEE-EES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCE-EEEETTTEEEEECT-TSCEEEEEECSSCCCSC
T ss_pred CCCEEE-EEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeE-EEEcCCCeEEEECC-CCCEeEEeeCCCCcccc
Confidence 777644 444 7899999 677777666655566778888888754 45566778888874 46566655544443445
Q ss_pred EEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-CceeEEEccCC-eEEEEcCCEEEecC
Q psy9936 180 VAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-PINNLAFSQRG-LLATSRGNIVEFLK 242 (315)
Q Consensus 180 ~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~g-~~~~~~~~~i~~~~ 242 (315)
+.+.+++. |..++.++.+..+|. ++ +.+..+.... .+.++..+++| +++++.+|.+....
T Consensus 260 ~~~~~~g~-l~v~t~~ggl~~~d~-~g-~~~~~~~~~~~~~~~~~~d~~g~l~~gt~~G~~~~~~ 321 (330)
T 3hxj_A 260 PVIGNTDT-IYFGSYDGHLYAINP-DG-TEKWNFETGSWIIATPVIDENGTIYFGTRNGKFYALF 321 (330)
T ss_dssp CEECTTSC-EEEECTTCEEEEECT-TS-CEEEEEECSSCCCSCCEECTTCCEEEECTTSCEEEEE
T ss_pred ceEcCCCe-EEEecCCCCEEEECC-CC-cEEEEEEcCCccccceEEcCCCEEEEEcCCCeEEEEe
Confidence 66666664 556777888999986 55 5565555444 46788887887 46667788776544
No 241
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.24 E-value=2.4e-08 Score=78.88 Aligned_cols=182 Identities=9% Similarity=0.034 Sum_probs=128.3
Q ss_pred CCcEEEEEEcCCCCEEEEEcCC--CeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEe--CCeEEEEeCCC-CEE
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKR--GHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQ--KDWVYIYDNQG-IEL 84 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~d--g~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~~~~~-~~~ 84 (315)
..-...+.|++ +.++.+.+.+ ..|+++|+.+++.+..+............+.+..|.... ++.+.+||..+ +.+
T Consensus 20 ~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 20 TAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPR 98 (243)
T ss_dssp TCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEE
T ss_pred ccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEE
Confidence 45567899986 5555565554 489999999999998887655555554444454454444 88999999954 455
Q ss_pred EEeecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCC-----CCeEEEEEcCCCCEEEEEcCCCeEEEE
Q psy9936 85 HCLKVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKK-----GKLSVMTQNPYNACICLGHRNGTVTMW 159 (315)
Q Consensus 85 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-----~~v~~~~~~p~~~~l~~~~~d~~i~i~ 159 (315)
..+.....-..++ +++..|+.+..++.|.++|..+.+.+.++.... ..++.+.|. +|..++..-.+..|.+.
T Consensus 99 ~ti~~~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vI 175 (243)
T 3mbr_X 99 ARFRYPGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARI 175 (243)
T ss_dssp EEEECSSCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred EEEeCCCCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEE
Confidence 5566544334444 567777777778899999999998888776432 245667765 67766666567899999
Q ss_pred cCCCCcceeEeecc-------------cccEEEEEECCCCCEEEEeeCC
Q psy9936 160 SPTVQKPLASLLCH-------------KAGIQSVAVNHTGTYMATSAGD 195 (315)
Q Consensus 160 d~~~~~~~~~~~~~-------------~~~i~~~~~sp~g~~l~~~~~d 195 (315)
|.++++.+..+... ..-.+.|+++|++..|++.+..
T Consensus 176 Dp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 176 DPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp CTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred ECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 99999988777521 1356899999987766655543
No 242
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.21 E-value=8.2e-08 Score=79.70 Aligned_cols=220 Identities=9% Similarity=0.020 Sum_probs=141.0
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEeC--C-eEEEEeCCCCEEEE
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQK--D-WVYIYDNQGIELHC 86 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~-~i~i~~~~~~~~~~ 86 (315)
...+..++|+++|+++++...++.|..||..+. ....+.....+..+++.++++++++... + .|..++.....+..
T Consensus 31 ~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 31 NTFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 466789999999997777767889999997654 4444445567889999999997766542 2 47777764444433
Q ss_pred eec---CCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeE-EEEec---------cCCCCeEEEEEcCCCCEEEEE-cC
Q psy9936 87 LKV---LNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKI-VSDFS---------AKKGKLSVMTQNPYNACICLG-HR 152 (315)
Q Consensus 87 ~~~---~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~-~~~~~---------~~~~~v~~~~~~p~~~~l~~~-~~ 152 (315)
+.. ......++..+++..+++-..++.|+++|...+.. +.... ..-...+.+ +|+++.|+++ ..
T Consensus 110 ~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~ 187 (306)
T 2p4o_A 110 LLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTE 187 (306)
T ss_dssp EEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETT
T ss_pred EEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCC
Confidence 322 22334555556565555555688999999876531 21110 111235556 7888766554 55
Q ss_pred CCeEEEEcCCC-Ccc--eeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCee--EeccC-CCceeEEEc-
Q psy9936 153 NGTVTMWSPTV-QKP--LASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLN--TFRTR-TPINNLAFS- 225 (315)
Q Consensus 153 d~~i~i~d~~~-~~~--~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~--~~~~~-~~v~~~~~s- 225 (315)
.+.|..||+.. ++. ...+. .......++++++|+++++....+.|.++|.. + +... .+... ..+++++|.
T Consensus 188 ~~~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G-~~~~~~~~~~~~~~p~~~a~~g 264 (306)
T 2p4o_A 188 KMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-R-STTIIAQAEQGVIGSTAVAFGQ 264 (306)
T ss_dssp TTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-C-CEEEEECGGGTCTTEEEEEECC
T ss_pred CCEEEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-C-CEEEEeecccccCCceEEEEec
Confidence 78999999874 321 12221 11345678999999987777778899999975 4 4422 23333 357899998
Q ss_pred --cCC--eEEEEcC
Q psy9936 226 --QRG--LLATSRG 235 (315)
Q Consensus 226 --~~g--~~~~~~~ 235 (315)
|++ +|+++..
T Consensus 265 ~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 265 TEGDCTAIYVVTNG 278 (306)
T ss_dssp STTTTTEEEEEECT
T ss_pred ccCCCCEEEEECCC
Confidence 785 4555543
No 243
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.21 E-value=8.6e-09 Score=82.07 Aligned_cols=179 Identities=7% Similarity=0.021 Sum_probs=125.5
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEe--CCeEEEEeCCC-CEEEE
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQ--KDWVYIYDNQG-IELHC 86 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~~~~~-~~~~~ 86 (315)
..-...+.|+. +.++.+.+.+|.|+++|+++++.+..+ ........-..+++..|.... ++.+.+||..+ +.+..
T Consensus 54 ~~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 54 NAFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERT 131 (268)
T ss_dssp TCCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEE
T ss_pred ccccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEE
Confidence 34457888874 566677788889999999999988777 555554433344444444443 88999999954 44555
Q ss_pred eecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCC-----CCeEEEEEcCCCCEEEEEcCCCeEEEEcC
Q psy9936 87 LKVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKK-----GKLSVMTQNPYNACICLGHRNGTVTMWSP 161 (315)
Q Consensus 87 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-----~~v~~~~~~p~~~~l~~~~~d~~i~i~d~ 161 (315)
+.....-..++ +++..|+.+..++.|.++|..+.+.+..+.... ..++.+.|. +|.+++..-.+..|.+.|.
T Consensus 132 i~~~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp 208 (268)
T 3nok_A 132 TRYSGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDP 208 (268)
T ss_dssp EECSSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECT
T ss_pred EeCCCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeC
Confidence 65443333444 567777777778899999999998888765422 235677776 7776666656889999999
Q ss_pred CCCcceeEeecc-------------cccEEEEEECCCCCEEEEee
Q psy9936 162 TVQKPLASLLCH-------------KAGIQSVAVNHTGTYMATSA 193 (315)
Q Consensus 162 ~~~~~~~~~~~~-------------~~~i~~~~~sp~g~~l~~~~ 193 (315)
.+++.+..+... ..-.+.|+++|+++.|++.+
T Consensus 209 ~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 209 ATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 999988777632 13568999999866554444
No 244
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.19 E-value=9.3e-10 Score=92.15 Aligned_cols=217 Identities=14% Similarity=0.126 Sum_probs=139.2
Q ss_pred EEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEecCCCc-eeEEEEeecCcEEEEEeCCeEEEEeCCCCEEEEeecC-
Q psy9936 13 IYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMNVMEE-VYDIKWLHLETMFAVAQKDWVYIYDNQGIELHCLKVL- 90 (315)
Q Consensus 13 v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~- 90 (315)
+.++...++|. |.+++.+ |..+|. +++....+..... ....... ++.+++.+.++.|..+|..+.........
T Consensus 62 ~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~-~~~l~v~t~~~~l~~~d~~g~~~~~~~~~~ 136 (330)
T 3hxj_A 62 ECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF-EDILYVTSMDGHLYAINTDGTEKWRFKTKK 136 (330)
T ss_dssp EECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEE-TTEEEEECTTSEEEEECTTSCEEEEEECSS
T ss_pred ccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEECCCCcccCceEE-CCEEEEEecCCEEEEEcCCCCEEEEEcCCC
Confidence 45566666664 4444444 777875 5544333332222 2222232 66665555588999999886554444433
Q ss_pred CceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCeEEEEcCCCCcceeEe
Q psy9936 91 NKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNGTVTMWSPTVQKPLASL 170 (315)
Q Consensus 91 ~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 170 (315)
..+.++...+++. ++.++.++.+..||.. ++....+......+.++...+++.+++ ++ +.|..+| .+++.+..+
T Consensus 137 ~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~ 210 (330)
T 3hxj_A 137 AIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNF 210 (330)
T ss_dssp CCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEE
T ss_pred ceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEE
Confidence 3455666666665 6667778999999998 877766665555677777878887554 44 7899999 777777666
Q ss_pred ecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCCC-ceeEEEccCCe-EEEEcCCEEEecCC
Q psy9936 171 LCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRTP-INNLAFSQRGL-LATSRGNIVEFLKP 243 (315)
Q Consensus 171 ~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~-v~~~~~s~~g~-~~~~~~~~i~~~~~ 243 (315)
......+.++...++|. |..++.++.+..+|. ++ ..+..+..... +.++.+.++|. ++++.++.+..+++
T Consensus 211 ~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g-~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 211 YAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DG-TEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINP 282 (330)
T ss_dssp CCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TS-CEEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECT
T ss_pred ccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CC-CEeEEeeCCCCccccceEcCCCeEEEecCCCCEEEECC
Confidence 65556678888888886 445666777888874 44 55555554443 45677777774 56666778887776
No 245
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.18 E-value=6.1e-09 Score=96.11 Aligned_cols=200 Identities=14% Similarity=0.177 Sum_probs=137.0
Q ss_pred CCeEEEEEccCceEEEEecCC--C------------------------------ceeEEEEeecCcEEEEEe-CC-----
Q psy9936 31 RGHVAAFDWVRKTLACEMNVM--E------------------------------EVYDIKWLHLETMFAVAQ-KD----- 72 (315)
Q Consensus 31 dg~i~v~~~~~~~~~~~~~~~--~------------------------------~v~~~~~~~~~~~l~~~~-~~----- 72 (315)
+|.|+.||..+|+.+..+... . ....+++.|++.++.++. ++
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~ 261 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDP 261 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCcccc
Confidence 689999999999988766421 0 012467788777777665 43
Q ss_pred --------------eEEEEeCC-CCEEEEeecC----------CceEEEEEcCCCc---eEEEEcCCCeEEEEEccCCeE
Q psy9936 73 --------------WVYIYDNQ-GIELHCLKVL----------NKVTRMEFLPYHF---LLATASEEGYLSWLDTSIGKI 124 (315)
Q Consensus 73 --------------~i~i~~~~-~~~~~~~~~~----------~~v~~~~~~~~~~---~l~~~~~d~~i~~~d~~~~~~ 124 (315)
.|..+|.. ++.+..+... .++.......+|. .++.++.+|.++++|..+|+.
T Consensus 262 ~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 341 (689)
T 1yiq_A 262 KWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGEL 341 (689)
T ss_dssp HHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCE
Confidence 39999995 5555444321 1122222233554 788999999999999999988
Q ss_pred EEEeccCC-CC--------------------------------------eEEEEEcCCCCEEEEEcC-------------
Q psy9936 125 VSDFSAKK-GK--------------------------------------LSVMTQNPYNACICLGHR------------- 152 (315)
Q Consensus 125 ~~~~~~~~-~~--------------------------------------v~~~~~~p~~~~l~~~~~------------- 152 (315)
+....... .. -..++++|+..++++...
T Consensus 342 l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~ 421 (689)
T 1yiq_A 342 LSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAP 421 (689)
T ss_dssp EEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCC
T ss_pred eccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccc
Confidence 74432110 00 112688898887776521
Q ss_pred --------------------------------CCeEEEEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEE
Q psy9936 153 --------------------------------NGTVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRI 200 (315)
Q Consensus 153 --------------------------------d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~i 200 (315)
+|.|..||+.+++.+.++..+ .+.....++..+.++++++.|+.++.
T Consensus 422 ~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagglvf~gt~dg~l~a 500 (689)
T 1yiq_A 422 KRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYV-TIFNGGTLSTAGNLVFEGSADGRVIA 500 (689)
T ss_dssp CCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEE
T ss_pred cccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCC-CCccCccceECCCEEEEECCCCcEEE
Confidence 378999999999988887643 33333456667889999999999999
Q ss_pred EEccCCCCCeeEeccCCCc--eeEEEccCCe-EEE
Q psy9936 201 WDVRNLEGPLNTFRTRTPI--NNLAFSQRGL-LAT 232 (315)
Q Consensus 201 wd~~~~~~~~~~~~~~~~v--~~~~~s~~g~-~~~ 232 (315)
||.+++ +.+..+..+.++ .-+.|..+|. |++
T Consensus 501 ~D~~tG-~~lw~~~~~~~~~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 501 YAADTG-EKLWEQPAASGVMAAPVTYSVDGEQYVT 534 (689)
T ss_dssp EETTTC-CEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred EECCCC-ccceeeeCCCCcccCceEEEECCEEEEE
Confidence 999999 888888776543 5577888994 444
No 246
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.17 E-value=6.1e-12 Score=107.58 Aligned_cols=173 Identities=7% Similarity=0.022 Sum_probs=94.1
Q ss_pred CcEEEEEeCCeEEEEeC-CCCEEEEeecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCC-eE-EEE
Q psy9936 63 ETMFAVAQKDWVYIYDN-QGIELHCLKVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGK-LS-VMT 139 (315)
Q Consensus 63 ~~~l~~~~~~~i~i~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~-v~-~~~ 139 (315)
+.+++.+.++.|+.||. +++.+..+.. ..+.+..+.+++..+++++.|+.|+.||..+|+.+..+..+... +. ...
T Consensus 10 ~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~ 88 (369)
T 2hz6_A 10 TLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPC 88 (369)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSC
T ss_pred CEEEEEcCCCEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCce
Confidence 44444445899999998 5666655555 55555556667778888889999999999888876665433110 10 001
Q ss_pred EcCCCCEEEEEcCCCeEEEEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCCCc
Q psy9936 140 QNPYNACICLGHRNGTVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRTPI 219 (315)
Q Consensus 140 ~~p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v 219 (315)
+. ++..+++++.++.+..||.++|+.+..+..+. ...++|++..+++++.|+.|+.||.+++ +.+..+..+. .
T Consensus 89 ~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG-~~~W~~~~~~-~ 161 (369)
T 2hz6_A 89 RS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTR-ELRWNATYFD-Y 161 (369)
T ss_dssp C------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSS-SCCCEEEEEE-E
T ss_pred Ee-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCC-CEEEeEeccc-c
Confidence 11 34567788889999999999999887776543 2456778889999999999999999998 7665554322 2
Q ss_pred eeEEEccC----C-eEEEEcCCEEEecCC
Q psy9936 220 NNLAFSQR----G-LLATSRGNIVEFLKP 243 (315)
Q Consensus 220 ~~~~~s~~----g-~~~~~~~~~i~~~~~ 243 (315)
..++++++ + .++++.++.+..|++
T Consensus 162 ~~~~~~~~~~~~~~v~~~~~dg~v~a~d~ 190 (369)
T 2hz6_A 162 AASLPEDDVDYKMSHFVSNGDGLVVTVDS 190 (369)
T ss_dssp CCBCCCCCTTCCCCEEEEETSCEEEEECT
T ss_pred cCccccCCccccceEEEECCCCEEEEEEC
Confidence 33344442 4 466677899998887
No 247
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.15 E-value=2.7e-08 Score=85.07 Aligned_cols=217 Identities=15% Similarity=0.083 Sum_probs=137.8
Q ss_pred CCCEEEEEcCCCeEEEEEccCceEEEEecC----------CCceeEEEEeecCcEEEEEeCCeEEEEeCC-CCEEEEeec
Q psy9936 21 NGRHLLLGGKRGHVAAFDWVRKTLACEMNV----------MEEVYDIKWLHLETMFAVAQKDWVYIYDNQ-GIELHCLKV 89 (315)
Q Consensus 21 ~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~l~~~~~~~i~i~~~~-~~~~~~~~~ 89 (315)
.+..+++++.++.|..+|..+++.+..... ...+.......++.+++.+.++.|..+|.. ++.+.....
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 355777788889999999999998776653 222333223335666666668999999985 555544443
Q ss_pred CCceE-EEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCe-----EEEEEcCCCCEEEEEcCCCeEEEEcCCC
Q psy9936 90 LNKVT-RMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKL-----SVMTQNPYNACICLGHRNGTVTMWSPTV 163 (315)
Q Consensus 90 ~~~v~-~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v-----~~~~~~p~~~~l~~~~~d~~i~i~d~~~ 163 (315)
...+. ..... +..+++++.++.+..+|..+|+.+..+....... ...... +..++++..++.+..+|..+
T Consensus 132 ~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~t 207 (376)
T 3q7m_A 132 AGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQ 207 (376)
T ss_dssp SSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETTT
T ss_pred CCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCC
Confidence 32221 11222 4477888889999999999998887765432111 111222 34677788899999999999
Q ss_pred CcceeEeeccccc----EEE---EEECC--CCCEEEEeeCCCcEEEEEccCCCCCeeEeccCCCceeEEEccCCeEEEEc
Q psy9936 164 QKPLASLLCHKAG----IQS---VAVNH--TGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRTPINNLAFSQRGLLATSR 234 (315)
Q Consensus 164 ~~~~~~~~~~~~~----i~~---~~~sp--~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~~~~~ 234 (315)
++.+......... +.. +.-.| .+..++.++.++.+..+|..++ +.+...... ....+....+..++++.
T Consensus 208 G~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG-~~~w~~~~~-~~~~~~~~~~~l~~~~~ 285 (376)
T 3q7m_A 208 GQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSG-QIMWKRELG-SVNDFIVDGNRIYLVDQ 285 (376)
T ss_dssp CCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTC-CEEEEECCC-CEEEEEEETTEEEEEET
T ss_pred CcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCC-cEEeeccCC-CCCCceEECCEEEEEcC
Confidence 9887766522100 000 11111 2456777888999999999998 666555433 24445554333567777
Q ss_pred CCEEEecCC
Q psy9936 235 GNIVEFLKP 243 (315)
Q Consensus 235 ~~~i~~~~~ 243 (315)
++.+..+++
T Consensus 286 ~g~l~~~d~ 294 (376)
T 3q7m_A 286 NDRVMALTI 294 (376)
T ss_dssp TCCEEEEET
T ss_pred CCeEEEEEC
Confidence 778887665
No 248
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.15 E-value=3.4e-08 Score=84.37 Aligned_cols=216 Identities=12% Similarity=0.106 Sum_probs=139.5
Q ss_pred CCCEEEEEcCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEeCCeEEEEeC-CCCEEEEeecCCce------
Q psy9936 21 NGRHLLLGGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQKDWVYIYDN-QGIELHCLKVLNKV------ 93 (315)
Q Consensus 21 ~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~-~~~~~~~~~~~~~v------ 93 (315)
++..+++++.++.|..+|..+++.+........+.......++.+++.+.++.|..+|. +++.+.......++
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~ 181 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGE 181 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCC
Confidence 34577778889999999999999887766443333222233566666556899999998 56555554433222
Q ss_pred EEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCC-------eEEEEEcC--CCCEEEEEcCCCeEEEEcCCCC
Q psy9936 94 TRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGK-------LSVMTQNP--YNACICLGHRNGTVTMWSPTVQ 164 (315)
Q Consensus 94 ~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~-------v~~~~~~p--~~~~l~~~~~d~~i~i~d~~~~ 164 (315)
...... +..+++++.++.+..+|..+|+.+......... +..+...| .+..++.++.++.+..+|.+++
T Consensus 182 ~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG 259 (376)
T 3q7m_A 182 SAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSG 259 (376)
T ss_dssp CCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTC
T ss_pred CCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCC
Confidence 112222 346778888999999999999887765432110 00011111 2456777888999999999999
Q ss_pred cceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEecc-CC-CceeEEEccCCeEEEEcCCEEEecC
Q psy9936 165 KPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRT-RT-PINNLAFSQRGLLATSRGNIVEFLK 242 (315)
Q Consensus 165 ~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~-~v~~~~~s~~g~~~~~~~~~i~~~~ 242 (315)
+.+..... .....+.. ++..++.++.++.+..+|..++ +.+..... .. .+..+....+..++++.++.+..++
T Consensus 260 ~~~w~~~~--~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG-~~~w~~~~~~~~~~~~~~~~~~~l~v~~~~g~l~~~d 334 (376)
T 3q7m_A 260 QIMWKREL--GSVNDFIV--DGNRIYLVDQNDRVMALTIDGG-VTLWTQSDLLHRLLTSPVLYNGNLVVGDSEGYLHWIN 334 (376)
T ss_dssp CEEEEECC--CCEEEEEE--ETTEEEEEETTCCEEEEETTTC-CEEEEECTTTTSCCCCCEEETTEEEEECTTSEEEEEE
T ss_pred cEEeeccC--CCCCCceE--ECCEEEEEcCCCeEEEEECCCC-cEEEeecccCCCcccCCEEECCEEEEEeCCCeEEEEE
Confidence 87766542 23344443 3667888888999999999998 66655542 22 2444444433356667788888877
Q ss_pred C
Q psy9936 243 P 243 (315)
Q Consensus 243 ~ 243 (315)
+
T Consensus 335 ~ 335 (376)
T 3q7m_A 335 V 335 (376)
T ss_dssp T
T ss_pred C
Confidence 6
No 249
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.13 E-value=1.2e-08 Score=81.24 Aligned_cols=185 Identities=9% Similarity=-0.013 Sum_probs=124.1
Q ss_pred eEEEEecCCCc--eeEEEEeecCcEEEEEe-CCeEEEEeCC-CCEEEEeecCCceEEEEEcCCCceEE-EEcCCCeEEEE
Q psy9936 43 TLACEMNVMEE--VYDIKWLHLETMFAVAQ-KDWVYIYDNQ-GIELHCLKVLNKVTRMEFLPYHFLLA-TASEEGYLSWL 117 (315)
Q Consensus 43 ~~~~~~~~~~~--v~~~~~~~~~~~l~~~~-~~~i~i~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~~ 117 (315)
+.+.++.|... ...+.|+. +.++.+++ +|.|+++|+. ++.+..+ ...........+++..|+ ..-.++.+.+|
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~ 121 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTW 121 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEE
T ss_pred EEEEEEcCCCccccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEE
Confidence 45666666544 47888873 45544444 6789999995 4443444 333333322233444444 44568899999
Q ss_pred EccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCeEEEEcCCCCcceeEeecc--c---ccEEEEEECCCCCEEEEe
Q psy9936 118 DTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNGTVTMWSPTVQKPLASLLCH--K---AGIQSVAVNHTGTYMATS 192 (315)
Q Consensus 118 d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~---~~i~~~~~sp~g~~l~~~ 192 (315)
|..+.+.+.++..... -..++ +++..|+.+..++.|.++|..+.+.+.++... . ..++.+.|. +|+.++..
T Consensus 122 D~~Tl~~~~ti~~~~e-GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanv 197 (268)
T 3nok_A 122 SGMPPQRERTTRYSGE-GWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANI 197 (268)
T ss_dssp ETTTTEEEEEEECSSC-CCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEE
T ss_pred ECCcCcEEEEEeCCCc-eeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEE
Confidence 9999999998875332 23343 56787877777899999999999888877632 2 245677876 77666555
Q ss_pred eCCCcEEEEEccCCCCCeeEeccC--------------CCceeEEEccCC-eEEEEc
Q psy9936 193 AGDSQLRIWDVRNLEGPLNTFRTR--------------TPINNLAFSQRG-LLATSR 234 (315)
Q Consensus 193 ~~d~~i~iwd~~~~~~~~~~~~~~--------------~~v~~~~~s~~g-~~~~~~ 234 (315)
-.++.|.+.|.+++ +.+..+... .-.+.|+|+|++ ++++++
T Consensus 198 w~s~~I~vIDp~TG-~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 198 WHSSDVLEIDPATG-TVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TTCSEEEEECTTTC-BEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CCCCeEEEEeCCCC-cEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 56789999999998 877776532 125889999976 455554
No 250
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.13 E-value=5.2e-08 Score=76.92 Aligned_cols=186 Identities=11% Similarity=0.040 Sum_probs=125.4
Q ss_pred eEEEEecCCC--ceeEEEEeecCcEEEEEe-C--CeEEEEeCC-CCEEEEeecCCceEEEEEcCCCceE-EEEcCCCeEE
Q psy9936 43 TLACEMNVME--EVYDIKWLHLETMFAVAQ-K--DWVYIYDNQ-GIELHCLKVLNKVTRMEFLPYHFLL-ATASEEGYLS 115 (315)
Q Consensus 43 ~~~~~~~~~~--~v~~~~~~~~~~~l~~~~-~--~~i~i~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~ 115 (315)
+.+.++.|.. -...+.|++ +.++.+++ . ..|+.+|+. ++.+..+.-..........+.+..| ...-.++.+.
T Consensus 10 ~v~~~~phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~ 88 (243)
T 3mbr_X 10 RVVKRYPHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGF 88 (243)
T ss_dssp EEEEEEECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEE
T ss_pred EEEEEcCCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEE
Confidence 4566677654 366899986 55555544 3 489999995 4555555444444333333334444 4445688999
Q ss_pred EEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCeEEEEcCCCCcceeEeeccc-----ccEEEEEECCCCCEEE
Q psy9936 116 WLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNGTVTMWSPTVQKPLASLLCHK-----AGIQSVAVNHTGTYMA 190 (315)
Q Consensus 116 ~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-----~~i~~~~~sp~g~~l~ 190 (315)
+||..+.+.+.++...... ..++ +++..|+.+..++.|.++|..+.+.+.++.... ..++.+.|. +|+.++
T Consensus 89 v~D~~tl~~~~ti~~~~~G-wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lya 164 (243)
T 3mbr_X 89 VYDLATLTPRARFRYPGEG-WALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLA 164 (243)
T ss_dssp EEETTTTEEEEEEECSSCC-CEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEE
T ss_pred EEECCcCcEEEEEeCCCCc-eEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEE
Confidence 9999999999988754322 3444 567777777778999999999998888776321 345667765 677665
Q ss_pred EeeCCCcEEEEEccCCCCCeeEeccC--------------CCceeEEEccCC-eEEEEc
Q psy9936 191 TSAGDSQLRIWDVRNLEGPLNTFRTR--------------TPINNLAFSQRG-LLATSR 234 (315)
Q Consensus 191 ~~~~d~~i~iwd~~~~~~~~~~~~~~--------------~~v~~~~~s~~g-~~~~~~ 234 (315)
..-.+..|.+.|.+++ +.+..+... .-.+.|+++|++ ++.+++
T Consensus 165 nvw~s~~I~vIDp~tG-~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 165 NVWLTSRIARIDPASG-KVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EETTTTEEEEECTTTC-BEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred EECCCCeEEEEECCCC-CEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 5556779999999998 877776532 125889999976 555555
No 251
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.07 E-value=1.6e-07 Score=81.80 Aligned_cols=151 Identities=15% Similarity=0.134 Sum_probs=101.8
Q ss_pred cEEEEEEcC-CCCEEEEEcCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEeC--C----eEEEEeCCCCEE
Q psy9936 12 GIYRMNYTK-NGRHLLLGGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQK--D----WVYIYDNQGIEL 84 (315)
Q Consensus 12 ~v~~~~~s~-~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~----~i~i~~~~~~~~ 84 (315)
.+..++++| ++..|.++...+.|+.+|+.++..............++|+++++.|.++.. + .+..++..+...
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~ 217 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFK 217 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSC
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCcee
Confidence 457889998 355555554448899999988776655555566889999999985555542 1 344455443221
Q ss_pred --EEeecCCceEEEEEcC-CCceEEEEcCCCeEEEEEccCCeEEEEecc-CCCCeEEEEEcCCCCEEE-EEcCCCeEEEE
Q psy9936 85 --HCLKVLNKVTRMEFLP-YHFLLATASEEGYLSWLDTSIGKIVSDFSA-KKGKLSVMTQNPYNACIC-LGHRNGTVTMW 159 (315)
Q Consensus 85 --~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~-~~~~v~~~~~~p~~~~l~-~~~~d~~i~i~ 159 (315)
..+........++++| ++.++++-..++.|..++...+........ .......++|+|+|++|+ +-...+.|..+
T Consensus 218 ~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~ 297 (430)
T 3tc9_A 218 VITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRS 297 (430)
T ss_dssp SEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred eeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEE
Confidence 2333445667889999 677666666788999999986654222221 223578899999999554 44567889998
Q ss_pred cCC
Q psy9936 160 SPT 162 (315)
Q Consensus 160 d~~ 162 (315)
+.+
T Consensus 298 ~~d 300 (430)
T 3tc9_A 298 DYD 300 (430)
T ss_dssp EEE
T ss_pred eCC
Confidence 765
No 252
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.03 E-value=1.6e-07 Score=84.69 Aligned_cols=221 Identities=12% Similarity=0.074 Sum_probs=139.9
Q ss_pred CCEEEEEcCCCeEEEEEccCceEEEEecCCC-----ceeEEEEeecCcEEEEEe------CCeEEEEeCC-CCEEEEeec
Q psy9936 22 GRHLLLGGKRGHVAAFDWVRKTLACEMNVME-----EVYDIKWLHLETMFAVAQ------KDWVYIYDNQ-GIELHCLKV 89 (315)
Q Consensus 22 ~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~------~~~i~i~~~~-~~~~~~~~~ 89 (315)
+..+++++.++.+..+|..+|+.+....... .+.+--...++.+++.+. ++.|+.+|.. ++.+.....
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEcc
Confidence 4577778889999999999999887765322 222211112565555544 6899999994 565554432
Q ss_pred CCce---------------------------------------EEEEEcCCCceEEEEcCC----------------CeE
Q psy9936 90 LNKV---------------------------------------TRMEFLPYHFLLATASEE----------------GYL 114 (315)
Q Consensus 90 ~~~v---------------------------------------~~~~~~~~~~~l~~~~~d----------------~~i 114 (315)
.... ..+++.+....++.++.+ +.|
T Consensus 195 ~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v 274 (571)
T 2ad6_A 195 TGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTI 274 (571)
T ss_dssp SSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEE
T ss_pred CCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEE
Confidence 2111 135667766667666532 369
Q ss_pred EEEEccCCeEEEEeccC--C-------CCeEEEEEcCCCC---EEEEEcCCCeEEEEcCCCCcceeEeeccc--------
Q psy9936 115 SWLDTSIGKIVSDFSAK--K-------GKLSVMTQNPYNA---CICLGHRNGTVTMWSPTVQKPLASLLCHK-------- 174 (315)
Q Consensus 115 ~~~d~~~~~~~~~~~~~--~-------~~v~~~~~~p~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------- 174 (315)
..+|..+|+.+-.++.. . ....-+...++|+ .++.++.+|.+.++|..+++.+..+....
T Consensus 275 ~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~ 354 (571)
T 2ad6_A 275 WGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKV 354 (571)
T ss_dssp EEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEE
T ss_pred EEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccc
Confidence 99999999988776532 1 1111123334674 57788899999999999998876654211
Q ss_pred -----ccE--------------------------EEEEECCCCCEEEEee------------------------------
Q psy9936 175 -----AGI--------------------------QSVAVNHTGTYMATSA------------------------------ 193 (315)
Q Consensus 175 -----~~i--------------------------~~~~~sp~g~~l~~~~------------------------------ 193 (315)
.++ ..++++|+..++++.+
T Consensus 355 d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~ 434 (571)
T 2ad6_A 355 DLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPG 434 (571)
T ss_dssp CTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEEC
T ss_pred cccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccC
Confidence 111 1357788777666553
Q ss_pred -------CCCcEEEEEccCCCCCeeEeccCCCceeEEE-ccCCe-EEEEcCCEEEecCC
Q psy9936 194 -------GDSQLRIWDVRNLEGPLNTFRTRTPINNLAF-SQRGL-LATSRGNIVEFLKP 243 (315)
Q Consensus 194 -------~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~-s~~g~-~~~~~~~~i~~~~~ 243 (315)
.++.+..||+.++ +.+..+....++..... ..++. ++++.++.+..++.
T Consensus 435 ~~~~~~~~~g~l~a~D~~tG-~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~ 492 (571)
T 2ad6_A 435 PNGPTKKEMGQIRAFDLTTG-KAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDN 492 (571)
T ss_dssp TTSTTSCCCEEEEEECTTTC-CEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEET
T ss_pred ccccCCCCCCeEEEEECCCC-CEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEEC
Confidence 3478999999998 77777665544433322 23454 55566888886665
No 253
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.02 E-value=6.1e-07 Score=74.40 Aligned_cols=199 Identities=16% Similarity=0.089 Sum_probs=124.0
Q ss_pred ceEEEEecCCCceeEEEEeecCcEEEEEe-CCeEEEEeCCCCEEEEeecCCceEEEEEcCCCceEEEEcCC--CeEEEEE
Q psy9936 42 KTLACEMNVMEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQGIELHCLKVLNKVTRMEFLPYHFLLATASEE--GYLSWLD 118 (315)
Q Consensus 42 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~i~~~d 118 (315)
.+.+..+........++|.++++++++.. ++.|+.||.++.....+.....+..+++.++|+++++.... ..|..+|
T Consensus 22 ~~~~~~~p~~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d 101 (306)
T 2p4o_A 22 AKIITSFPVNTFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLV 101 (306)
T ss_dssp EEEEEEECTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEE
T ss_pred ceEeEeCCCCCCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEc
Confidence 44455554445678899999998777764 78999999987665555555678899999999866655332 2477788
Q ss_pred ccCCeEEEEecc-CCCCeEEEEEcCCCCEEEEEcCCCeEEEEcCCCCcc-eeEee---------cccccEEEEEECCCCC
Q psy9936 119 TSIGKIVSDFSA-KKGKLSVMTQNPYNACICLGHRNGTVTMWSPTVQKP-LASLL---------CHKAGIQSVAVNHTGT 187 (315)
Q Consensus 119 ~~~~~~~~~~~~-~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~-~~~~~---------~~~~~i~~~~~sp~g~ 187 (315)
..+++....... .......++..+++..+++...++.|.++|..+++. +.... ..-...+.+ +|++.
T Consensus 102 ~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~ 179 (306)
T 2p4o_A 102 KSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGN 179 (306)
T ss_dssp CTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETT
T ss_pred CCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCC
Confidence 777765433221 222345666666665555555688999999875421 11000 111234555 78887
Q ss_pred EEEEe-eCCCcEEEEEccC-CCCC--eeEeccCCCceeEEEccCCeEEEEc--CCEEEecCC
Q psy9936 188 YMATS-AGDSQLRIWDVRN-LEGP--LNTFRTRTPINNLAFSQRGLLATSR--GNIVEFLKP 243 (315)
Q Consensus 188 ~l~~~-~~d~~i~iwd~~~-~~~~--~~~~~~~~~v~~~~~s~~g~~~~~~--~~~i~~~~~ 243 (315)
+|+.+ ...+.|..|++.. + .. ...+........++++++|.+.++. .+.|..+++
T Consensus 180 ~lyv~d~~~~~I~~~~~~~~g-~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~ 240 (306)
T 2p4o_A 180 FLYVSNTEKMLLLRIPVDSTD-KPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAP 240 (306)
T ss_dssp EEEEEETTTTEEEEEEBCTTS-CBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECT
T ss_pred EEEEEeCCCCEEEEEEeCCCC-CCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECC
Confidence 66555 4567899999875 2 21 2222222346788999998544432 456665544
No 254
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.99 E-value=2.6e-06 Score=71.99 Aligned_cols=228 Identities=11% Similarity=-0.018 Sum_probs=142.7
Q ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEe--CCeEEEEeCCCCEEEEee
Q psy9936 11 FGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQ--KDWVYIYDNQGIELHCLK 88 (315)
Q Consensus 11 ~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~~~~~~~~~~~~ 88 (315)
+...|.+..++ .+|+.+. ...|+..++.+............+..++|.+.+..|..+. .+.|+.+++++.....+.
T Consensus 34 d~~~C~~~~~~-~~ll~~~-~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~ 111 (349)
T 3v64_C 34 DRRSCKALGPE-PVLLFAN-RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV 111 (349)
T ss_dssp TSSCEEESSSC-CEEEEEC-BSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred CCCcccccccC-ceeEeec-ccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEE
Confidence 34456666663 3555443 4468888887766655555556688999998655555543 678999999765443332
Q ss_pred --cCCceEEEEEcCCC-ceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEE-cCC-CeEEEEcCCC
Q psy9936 89 --VLNKVTRMEFLPYH-FLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLG-HRN-GTVTMWSPTV 163 (315)
Q Consensus 89 --~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~-~~d-~~i~i~d~~~ 163 (315)
.......+++.+.+ .++++-...+.|.+.++........+.........++++|.+..|+.. ... +.|..++++.
T Consensus 112 ~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG 191 (349)
T 3v64_C 112 STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG 191 (349)
T ss_dssp CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred eCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCC
Confidence 22456789999854 455555667889999987543333333334567899999966655544 344 7899998874
Q ss_pred CcceeEe-ecccccEEEEEECCCCCEEEEee-CCCcEEEEEccCCCCCeeEeccC-CCceeEEEccCCeEEEE-cCCEEE
Q psy9936 164 QKPLASL-LCHKAGIQSVAVNHTGTYMATSA-GDSQLRIWDVRNLEGPLNTFRTR-TPINNLAFSQRGLLATS-RGNIVE 239 (315)
Q Consensus 164 ~~~~~~~-~~~~~~i~~~~~sp~g~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~-~~v~~~~~s~~g~~~~~-~~~~i~ 239 (315)
. ....+ ...-...+.++++|++..|+.+. ..+.|..+|+... .....+... .....+++..+..+.+. ..+.|.
T Consensus 192 ~-~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~-~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~ 269 (349)
T 3v64_C 192 S-GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS-HRKAVISQGLPHPFAITVFEDSLYWTDWHTKSIN 269 (349)
T ss_dssp C-SCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECSSCSSEEEEEEETTEEEEEETTTTEEE
T ss_pred C-CcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC-ceEEEEeCCCCCceEEEEECCEEEEecCCCCeEE
Confidence 3 33333 22334678999998776666554 5567999998764 333323222 24567777544455554 355665
Q ss_pred ecC
Q psy9936 240 FLK 242 (315)
Q Consensus 240 ~~~ 242 (315)
..+
T Consensus 270 ~~~ 272 (349)
T 3v64_C 270 SAN 272 (349)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 255
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.99 E-value=1.8e-07 Score=84.45 Aligned_cols=212 Identities=17% Similarity=0.129 Sum_probs=134.4
Q ss_pred CEEEEEcC------CCeEEEEEccCceEEEEecCCCce---------------------------------------eEE
Q psy9936 23 RHLLLGGK------RGHVAAFDWVRKTLACEMNVMEEV---------------------------------------YDI 57 (315)
Q Consensus 23 ~~l~~~~~------dg~i~v~~~~~~~~~~~~~~~~~v---------------------------------------~~~ 57 (315)
..+++++. ++.|+.+|..+|+.+..+...... ..+
T Consensus 161 g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~ 240 (571)
T 2ad6_A 161 DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWY 240 (571)
T ss_dssp TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCC
T ss_pred CEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeE
Confidence 34555544 789999999999988776532211 124
Q ss_pred EEeecCcEEEEEe-C----------------CeEEEEeCC-CCEEEEeecC----------CceEEEEEcCCCc---eEE
Q psy9936 58 KWLHLETMFAVAQ-K----------------DWVYIYDNQ-GIELHCLKVL----------NKVTRMEFLPYHF---LLA 106 (315)
Q Consensus 58 ~~~~~~~~l~~~~-~----------------~~i~i~~~~-~~~~~~~~~~----------~~v~~~~~~~~~~---~l~ 106 (315)
++.+....+..+. + +.|..+|.. ++.+...... ....-+...++|+ .++
T Consensus 241 a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~ 320 (571)
T 2ad6_A 241 AYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLS 320 (571)
T ss_dssp EEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEE
T ss_pred EEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEE
Confidence 5555544444443 1 258889985 4544444321 1111122234673 677
Q ss_pred EEcCCCeEEEEEccCCeEEEEeccCC-------------CCe--------------------------EEEEEcCCCCEE
Q psy9936 107 TASEEGYLSWLDTSIGKIVSDFSAKK-------------GKL--------------------------SVMTQNPYNACI 147 (315)
Q Consensus 107 ~~~~d~~i~~~d~~~~~~~~~~~~~~-------------~~v--------------------------~~~~~~p~~~~l 147 (315)
.++.+|.++++|..+|+.+..+.... .++ ..++++|+..++
T Consensus 321 ~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~ 400 (571)
T 2ad6_A 321 HIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTL 400 (571)
T ss_dssp EECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEE
T ss_pred EeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEE
Confidence 88899999999999998877654221 011 235788887776
Q ss_pred EEEc-------------------------------------CCCeEEEEcCCCCcceeEeecccccEEEEEECCCCCEEE
Q psy9936 148 CLGH-------------------------------------RNGTVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMA 190 (315)
Q Consensus 148 ~~~~-------------------------------------~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~ 190 (315)
++.. .++.|..||+.+++.+.++.. ...+....+...+..++
T Consensus 401 yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~-~~~~~~~~~~t~gg~v~ 479 (571)
T 2ad6_A 401 YAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWE-KFAAWGGTLYTKGGLVW 479 (571)
T ss_dssp EEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEE-SSCCCSBCEEETTTEEE
T ss_pred EEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecC-CCCccceeEEECCCEEE
Confidence 6543 357899999999998877753 22222222333466777
Q ss_pred EeeCCCcEEEEEccCCCCCeeEeccCCCc--eeEEEccCCe-EEEEcCC
Q psy9936 191 TSAGDSQLRIWDVRNLEGPLNTFRTRTPI--NNLAFSQRGL-LATSRGN 236 (315)
Q Consensus 191 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~v--~~~~~s~~g~-~~~~~~~ 236 (315)
+++.|+.++.||.+++ +.+..+....++ ..+.+..+|. ++++.++
T Consensus 480 ~g~~dg~l~a~D~~tG-~~lw~~~~~~~~~~~p~~~~~~G~~yv~~~~G 527 (571)
T 2ad6_A 480 YATLDGYLKALDNKDG-KELWNFKMPSGGIGSPMTYSFKGKQYIGSMYG 527 (571)
T ss_dssp EECTTSEEEEEETTTC-CEEEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred EEcCCCeEEEEECCCC-CEEEEEeCCCCcEeeeEEEEECCEEEEEEECC
Confidence 8999999999999999 888888766543 3345667884 5554433
No 256
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.99 E-value=6.1e-07 Score=78.11 Aligned_cols=192 Identities=13% Similarity=0.118 Sum_probs=122.6
Q ss_pred cEEEEEEcCC--CCEEEEEcCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEeCC-----eEEEEeCCCCE-
Q psy9936 12 GIYRMNYTKN--GRHLLLGGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQKD-----WVYIYDNQGIE- 83 (315)
Q Consensus 12 ~v~~~~~s~~--~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-----~i~i~~~~~~~- 83 (315)
.+..++|+|+ +..|..+...+.|+.++..++..............++|+++|.++++...+ .+...+..+..
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~ 219 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFT 219 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTC
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCee
Confidence 4678999995 344444443388999999888876665555668999999999955554421 24444432211
Q ss_pred -EEEeecCCceEEEEEcC-CCceEEEEcCCCeEEEEEccCCeEEEEe-cc-CCCCeEEEEEcCCCCEEEE-EcCCCeEEE
Q psy9936 84 -LHCLKVLNKVTRMEFLP-YHFLLATASEEGYLSWLDTSIGKIVSDF-SA-KKGKLSVMTQNPYNACICL-GHRNGTVTM 158 (315)
Q Consensus 84 -~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~-~~-~~~~v~~~~~~p~~~~l~~-~~~d~~i~i 158 (315)
...+........++++| ++.++++-..++.|+.+|..++.....+ .. .......++|+|+|++|+. -...+.|..
T Consensus 220 ~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~ 299 (433)
T 4hw6_A 220 ERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYR 299 (433)
T ss_dssp CEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred ccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEE
Confidence 12233445567789999 6666656667788999998877652222 21 1223457999999995554 455789999
Q ss_pred EcCC--CCcc--eeEeecc---------------cccEEEEEE---------CCCCCEEEEeeCCCcEEEEEc
Q psy9936 159 WSPT--VQKP--LASLLCH---------------KAGIQSVAV---------NHTGTYMATSAGDSQLRIWDV 203 (315)
Q Consensus 159 ~d~~--~~~~--~~~~~~~---------------~~~i~~~~~---------sp~g~~l~~~~~d~~i~iwd~ 203 (315)
++.. ++.. ...+.+. -.....+++ .++|.++++-...+.|+.++.
T Consensus 300 ~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 300 VDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp EEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred EeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC
Confidence 7765 2321 1122211 124677999 777877777667778998885
No 257
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.98 E-value=3.8e-07 Score=76.20 Aligned_cols=191 Identities=10% Similarity=-0.007 Sum_probs=123.5
Q ss_pred cEEEEEEcC-CCCEEEEEcCCCeEEEEEccCceEEEEec-----CCCceeEEEEee-cCcEEEEEeC-------------
Q psy9936 12 GIYRMNYTK-NGRHLLLGGKRGHVAAFDWVRKTLACEMN-----VMEEVYDIKWLH-LETMFAVAQK------------- 71 (315)
Q Consensus 12 ~v~~~~~s~-~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~l~~~~~------------- 71 (315)
.+.++++.+ +|.+++ +...+.|..+|..++....... .......+++.+ +|+++++...
T Consensus 81 ~p~gi~~~~~~g~l~v-~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~ 159 (322)
T 2fp8_A 81 RTYDISYNLQNNQLYI-VDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMD 159 (322)
T ss_dssp CEEEEEEETTTTEEEE-EETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHH
T ss_pred CCceEEEcCCCCcEEE-EECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehc
Confidence 578899998 665544 4344458888877664322211 113468899999 8987776532
Q ss_pred -----CeEEEEeCCCCEEEEe-ecCCceEEEEEcCCCceEEEE-cCCCeEEEEEccCCe--EEEEeccCCCCeEEEEEcC
Q psy9936 72 -----DWVYIYDNQGIELHCL-KVLNKVTRMEFLPYHFLLATA-SEEGYLSWLDTSIGK--IVSDFSAKKGKLSVMTQNP 142 (315)
Q Consensus 72 -----~~i~i~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~~--~~~~~~~~~~~v~~~~~~p 142 (315)
+.|..+|..+.....+ ........++++|+++.|+++ ...+.|.+|++.... ....+....+ ...+++.+
T Consensus 160 ~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~ 238 (322)
T 2fp8_A 160 TSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNA 238 (322)
T ss_dssp HTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECT
T ss_pred ccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECC
Confidence 5788899865554433 233556789999999866555 566899999987421 1111111233 78899999
Q ss_pred CCCEEEEEcC----------CCeEEEEcCCCCcceeEeeccc----ccEEEEEECCCCCEEEEeeCCCcEEEEEccCC
Q psy9936 143 YNACICLGHR----------NGTVTMWSPTVQKPLASLLCHK----AGIQSVAVNHTGTYMATSAGDSQLRIWDVRNL 206 (315)
Q Consensus 143 ~~~~l~~~~~----------d~~i~i~d~~~~~~~~~~~~~~----~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~ 206 (315)
+|++.++... .+.|..+|.. ++.+..+.... ..++++++ .+++++++....+.|..+++...
T Consensus 239 ~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 239 DGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp TSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC---
T ss_pred CCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecccc
Confidence 9986666544 4678889875 66666665332 34666666 46666666667788999988643
No 258
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.97 E-value=8.6e-06 Score=67.78 Aligned_cols=217 Identities=10% Similarity=0.002 Sum_probs=135.8
Q ss_pred EEEEEcCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEe--CCeEEEEeCCC----CEEEE-ee-cCCceEE
Q psy9936 24 HLLLGGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQ--KDWVYIYDNQG----IELHC-LK-VLNKVTR 95 (315)
Q Consensus 24 ~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~~~~~----~~~~~-~~-~~~~v~~ 95 (315)
+|+.+.. ..|+..++.+.+....+.....+..+.|.+.+..|..+. .+.|+.+++.+ ..... +. .......
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g 81 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 81 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred EEEEECC-CeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCE
Confidence 4555443 469999998877666666566788999998765555543 67999999865 22222 22 2245688
Q ss_pred EEEcCCC-ceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcC-C-CeEEEEcCCCCcceeEee-
Q psy9936 96 MEFLPYH-FLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHR-N-GTVTMWSPTVQKPLASLL- 171 (315)
Q Consensus 96 ~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~-d-~~i~i~d~~~~~~~~~~~- 171 (315)
+++.+.+ +++++-...+.|.++++........+.........++++|.+..|+.+.. . +.|..+++. +.....+.
T Consensus 82 lavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~ 160 (316)
T 1ijq_A 82 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVT 160 (316)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEEC
T ss_pred EEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEE
Confidence 9998754 45555567889999998754333333333456789999997665555543 2 688888886 33333332
Q ss_pred cccccEEEEEECCCCCEEEEee-CCCcEEEEEccCCCCCeeEeccC---CCceeEEEccCCeEEEE-cCCEEEecCC
Q psy9936 172 CHKAGIQSVAVNHTGTYMATSA-GDSQLRIWDVRNLEGPLNTFRTR---TPINNLAFSQRGLLATS-RGNIVEFLKP 243 (315)
Q Consensus 172 ~~~~~i~~~~~sp~g~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~---~~v~~~~~s~~g~~~~~-~~~~i~~~~~ 243 (315)
..-...+.++++|++..|+.+. ..+.|..+|+... ......... .....+++..+..+.+. ..+.|..+++
T Consensus 161 ~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~-~~~~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~ 236 (316)
T 1ijq_A 161 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-NRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANR 236 (316)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred CCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC-ceEEEeecCCccCCcEEEEEECCEEEEEECCCCeEEEEeC
Confidence 2335678999999877666554 5568999998753 322222221 23567777654445444 3566665543
No 259
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.96 E-value=2.7e-06 Score=68.00 Aligned_cols=191 Identities=9% Similarity=0.077 Sum_probs=127.0
Q ss_pred CCcEEEEEEcCCCCEE-EEEcCCCeEEEEEccCceEEEEecC--CCceeEEEEeecCcEEEEEe-CCeEEEEeCC--CC-
Q psy9936 10 QFGIYRMNYTKNGRHL-LLGGKRGHVAAFDWVRKTLACEMNV--MEEVYDIKWLHLETMFAVAQ-KDWVYIYDNQ--GI- 82 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l-~~~~~dg~i~v~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~-~~~i~i~~~~--~~- 82 (315)
...+..++|+|++..| ++...++.|...|.. ++....+.. ....-.+++.+++.++++.. ++.+.++++. +.
T Consensus 26 ~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i 104 (255)
T 3qqz_A 26 TNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEV 104 (255)
T ss_dssp CSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCE
T ss_pred ccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCee
Confidence 5679999999987655 456678889999987 887777653 34677888988888766553 6788888863 22
Q ss_pred -EEEEee-------cCCceEEEEEcCCCceEEEEcCCCeEEEEEcc---CCeEEEEec-------cCCCCeEEEEEcCCC
Q psy9936 83 -ELHCLK-------VLNKVTRMEFLPYHFLLATASEEGYLSWLDTS---IGKIVSDFS-------AKKGKLSVMTQNPYN 144 (315)
Q Consensus 83 -~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~---~~~~~~~~~-------~~~~~v~~~~~~p~~ 144 (315)
.+.... .......++|+|.++.|+++.......+|.+. ....+..+. .+...+.+++++|..
T Consensus 105 ~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~t 184 (255)
T 3qqz_A 105 KILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQK 184 (255)
T ss_dssp EEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTT
T ss_pred eeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCC
Confidence 112221 12346899999998877777766555555553 111112111 123457889999954
Q ss_pred -CEEEEEcCCCeEEEEcCCCCcceeEeeccc---------ccEEEEEECCCCCEEEEeeCCCcEEEEEc
Q psy9936 145 -ACICLGHRNGTVTMWSPTVQKPLASLLCHK---------AGIQSVAVNHTGTYMATSAGDSQLRIWDV 203 (315)
Q Consensus 145 -~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---------~~i~~~~~sp~g~~l~~~~~d~~i~iwd~ 203 (315)
++++.......+.++|.. ++.+..+.-.. .....|+|.|+|+++++ +..+.++.+.-
T Consensus 185 g~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 185 NTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp TEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC
T ss_pred CeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEe
Confidence 466667778899999977 55555544221 25689999999985544 67776766643
No 260
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.94 E-value=8e-07 Score=80.31 Aligned_cols=156 Identities=12% Similarity=0.094 Sum_probs=101.3
Q ss_pred EEEcCCCCE----EEEEcCCCeEEEEEccCceEEEEecCCC-----ceeEEEEeecCcEEEEEe------CCeEEEEeCC
Q psy9936 16 MNYTKNGRH----LLLGGKRGHVAAFDWVRKTLACEMNVME-----EVYDIKWLHLETMFAVAQ------KDWVYIYDNQ 80 (315)
Q Consensus 16 ~~~s~~~~~----l~~~~~dg~i~v~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~------~~~i~i~~~~ 80 (315)
++++|.+.. |++++.++.|.-+|..+|+.+....... .+.+--...++.+++.+. ++.|+-+|..
T Consensus 111 ~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~ 190 (599)
T 1w6s_A 111 LAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVK 190 (599)
T ss_dssp CEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETT
T ss_pred eEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECC
Confidence 455444444 7788889999999999999887765322 222211122565555443 6899999985
Q ss_pred -CCEEEEeecCCce---------------------------------------EEEEEcCCCceEEEEcCC---------
Q psy9936 81 -GIELHCLKVLNKV---------------------------------------TRMEFLPYHFLLATASEE--------- 111 (315)
Q Consensus 81 -~~~~~~~~~~~~v---------------------------------------~~~~~~~~~~~l~~~~~d--------- 111 (315)
++.+.......+. ..+++.+...+++.++.+
T Consensus 191 TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r 270 (599)
T 1w6s_A 191 TGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMR 270 (599)
T ss_dssp TCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGS
T ss_pred CCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCccc
Confidence 5555544322111 134566777777777655
Q ss_pred -------CeEEEEEccCCeEEEEeccCCC---------CeEEEEEc-CCC---CEEEEEcCCCeEEEEcCCCCcceeEee
Q psy9936 112 -------GYLSWLDTSIGKIVSDFSAKKG---------KLSVMTQN-PYN---ACICLGHRNGTVTMWSPTVQKPLASLL 171 (315)
Q Consensus 112 -------~~i~~~d~~~~~~~~~~~~~~~---------~v~~~~~~-p~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~ 171 (315)
+.|..+|..+|+.+-.++.... ...-+... .+| ..++.++.+|.+.++|.++++.+....
T Consensus 271 ~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 271 PGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp CSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeeccc
Confidence 3799999999998877654221 11112222 567 467778999999999999998876654
No 261
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.93 E-value=3.2e-06 Score=79.53 Aligned_cols=223 Identities=7% Similarity=0.026 Sum_probs=148.0
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec---------CCCceeEEEEeecCc-EEEEEeCCeEEEEeC
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN---------VMEEVYDIKWLHLET-MFAVAQKDWVYIYDN 79 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~---------~~~~v~~~~~~~~~~-~l~~~~~~~i~i~~~ 79 (315)
...|.++...++|.+. .|+.++.|..|+..+++...... ....|.++...+++. +.+.+.++-|..++.
T Consensus 356 ~~~V~~i~~d~~g~lW-iGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~ 434 (795)
T 4a2l_A 356 DNVVSCIVEDKDKNLW-IGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHR 434 (795)
T ss_dssp CSSEEEEEECTTSCEE-EEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEET
T ss_pred CCeeEEEEECCCCCEE-EEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeC
Confidence 4568999999888654 46677679999988776543321 134688888888898 666555678999998
Q ss_pred CCCEEEEeec------CCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEec------cCCCCeEEEEEcCCCCEE
Q psy9936 80 QGIELHCLKV------LNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFS------AKKGKLSVMTQNPYNACI 147 (315)
Q Consensus 80 ~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~------~~~~~v~~~~~~p~~~~l 147 (315)
.+.....+.. ...|.++...++|.+.+.. .+ -+.+||..+++...... .....|.++...++|++.
T Consensus 435 ~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lW 512 (795)
T 4a2l_A 435 NSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-LS-ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLW 512 (795)
T ss_dssp TTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-SS-CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEE
T ss_pred CCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-cC-ceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEE
Confidence 7665555432 2568899888888755444 44 58899988765433221 123568999999999866
Q ss_pred EEEcCCCeEEEEcCCCCcceeEee-------cccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEecc-----
Q psy9936 148 CLGHRNGTVTMWSPTVQKPLASLL-------CHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRT----- 215 (315)
Q Consensus 148 ~~~~~d~~i~i~d~~~~~~~~~~~-------~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~----- 215 (315)
+... +.+..||..+++. .+. .....|.++...++|.+.+... . -+..||..+. .+..+..
T Consensus 513 igt~--~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~-Gl~~~d~~~~--~~~~~~~~~gl~ 584 (795)
T 4a2l_A 513 IGGE--EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-E-GFYCFNEKDK--QIKRYNTTNGLP 584 (795)
T ss_dssp EEES--SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-S-CEEEEETTTT--EEEEECGGGTCS
T ss_pred EEeC--CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-C-CceeECCCCC--cEEEeCCCCCCc
Confidence 5443 4588888876653 222 1345789999999998655443 3 5888988764 3333322
Q ss_pred CCCceeEEEccCCeEEEEcCCEEEecCC
Q psy9936 216 RTPINNLAFSQRGLLATSRGNIVEFLKP 243 (315)
Q Consensus 216 ~~~v~~~~~s~~g~~~~~~~~~i~~~~~ 243 (315)
...|.++..+++|.+-++.++-+..++|
T Consensus 585 ~~~i~~i~~d~~g~lWi~t~~Gl~~~~~ 612 (795)
T 4a2l_A 585 NNVVYGILEDSFGRLWLSTNRGISCFNP 612 (795)
T ss_dssp CSCEEEEEECTTSCEEEEETTEEEEEET
T ss_pred hhheEEEEECCCCCEEEEcCCceEEEcC
Confidence 1247889999988654444555555555
No 262
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.92 E-value=2.6e-06 Score=80.16 Aligned_cols=224 Identities=11% Similarity=0.055 Sum_probs=150.3
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-------CCCceeEEEEeecCcEEEEEeCCeEEEEeCCCC
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-------VMEEVYDIKWLHLETMFAVAQKDWVYIYDNQGI 82 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~~~~ 82 (315)
...|.++...++|.+. .|+.++.|..|+..++....... ....|.++...++|.+.+.+.++-|..|+....
T Consensus 309 ~~~i~~i~~D~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~ 387 (795)
T 4a2l_A 309 QRSVRSIFMDSQGGMW-LGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQ 387 (795)
T ss_dssp SSCEEEEEECTTSCEE-EEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTC
T ss_pred CCcEEEEEEeCCcCEE-EEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCC
Confidence 4679999999988654 46666679999876654332211 134588888888888887777778999998655
Q ss_pred EEEEeec----------CCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEec----cCCCCeEEEEEcCCCCEEE
Q psy9936 83 ELHCLKV----------LNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFS----AKKGKLSVMTQNPYNACIC 148 (315)
Q Consensus 83 ~~~~~~~----------~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~----~~~~~v~~~~~~p~~~~l~ 148 (315)
....+.. ...|.++...+++..|.+|+.++-+..||..+++...... .....|.++...++|++.+
T Consensus 388 ~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwi 467 (795)
T 4a2l_A 388 RFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWL 467 (795)
T ss_dssp CEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEE
T ss_pred cEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEE
Confidence 4444321 2568899888888756677777789999988776443321 1245689999988887555
Q ss_pred EEcCCCeEEEEcCCCCcceeEeec-------ccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEec-------
Q psy9936 149 LGHRNGTVTMWSPTVQKPLASLLC-------HKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFR------- 214 (315)
Q Consensus 149 ~~~~d~~i~i~d~~~~~~~~~~~~-------~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~------- 214 (315)
.. . +.+.+||..+++.. .+.. ....|.++...++|.+.+... +-+..||..+. .. .+.
T Consensus 468 gt-~-~Gl~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~-~~--~~~~~~~~~~ 539 (795)
T 4a2l_A 468 GT-L-SALVRFNPEQRSFT-TIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGL-DI--QKASILPVSN 539 (795)
T ss_dssp EE-S-SCEEEEETTTTEEE-ECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETT-EE--EECCCSCSCG
T ss_pred Ee-c-CceeEEeCCCCeEE-EccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCC-eE--EEecCCCCCC
Confidence 44 3 45888998876432 2221 235789999999998665444 45888998775 33 222
Q ss_pred -cCCCceeEEEccCCe-EEEEcCCEEEecCC
Q psy9936 215 -TRTPINNLAFSQRGL-LATSRGNIVEFLKP 243 (315)
Q Consensus 215 -~~~~v~~~~~s~~g~-~~~~~~~~i~~~~~ 243 (315)
....|.++..+++|. ++++.+ -+..+++
T Consensus 540 l~~~~i~~i~~d~~g~lWigT~~-Gl~~~d~ 569 (795)
T 4a2l_A 540 VTKLFTNCIYEASNGIIWVGTRE-GFYCFNE 569 (795)
T ss_dssp GGGSCEEEEEECTTSCEEEEESS-CEEEEET
T ss_pred CCCCeeEEEEECCCCCEEEEeCC-CceeECC
Confidence 112478899999985 555555 4555544
No 263
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.92 E-value=7.7e-07 Score=83.07 Aligned_cols=190 Identities=10% Similarity=0.001 Sum_probs=112.3
Q ss_pred cEEEEEEc-CCCCEEEEEcC-C----CeEEEEEccCc-eEEEEecCCCceeEEEEeecCcEEEEEe-C-----CeEEEEe
Q psy9936 12 GIYRMNYT-KNGRHLLLGGK-R----GHVAAFDWVRK-TLACEMNVMEEVYDIKWLHLETMFAVAQ-K-----DWVYIYD 78 (315)
Q Consensus 12 ~v~~~~~s-~~~~~l~~~~~-d----g~i~v~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~-----~~i~i~~ 78 (315)
.+...+|| |||++||.+.. + ..|+++|+.++ +.+.. ........+.|+||++.|+... + ..|++++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~ 253 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-KVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHV 253 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-CEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-cccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEE
Confidence 56788999 99998886533 2 35999999988 63211 0111235789999997776654 3 2688888
Q ss_pred CCCC---EEEEee--cCCceEEEEEcCCCceEEEEcC---CCeEEEEEccCCe-EE--EEe-ccCCCCeEEEEEcCCCCE
Q psy9936 79 NQGI---ELHCLK--VLNKVTRMEFLPYHFLLATASE---EGYLSWLDTSIGK-IV--SDF-SAKKGKLSVMTQNPYNAC 146 (315)
Q Consensus 79 ~~~~---~~~~~~--~~~~v~~~~~~~~~~~l~~~~~---d~~i~~~d~~~~~-~~--~~~-~~~~~~v~~~~~~p~~~~ 146 (315)
+.+. ....+. .......+.|+|||++|+..+. ...|.++|+.++. .. ..+ .........+.|+..+.+
T Consensus 254 lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l 333 (751)
T 2xe4_A 254 MGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHL 333 (751)
T ss_dssp TTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEE
T ss_pred CCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEE
Confidence 8542 122222 2244667899999998877653 3458889988752 12 333 333445566665544444
Q ss_pred EEEEcCC----CeEEEEcCCCCcceeE-eecccc--cEEEEEECCCCCEEEEeeCCCc--EEEEEc
Q psy9936 147 ICLGHRN----GTVTMWSPTVQKPLAS-LLCHKA--GIQSVAVNHTGTYMATSAGDSQ--LRIWDV 203 (315)
Q Consensus 147 l~~~~~d----~~i~i~d~~~~~~~~~-~~~~~~--~i~~~~~sp~g~~l~~~~~d~~--i~iwd~ 203 (315)
++....+ ..|..+|+.++..... +..+.. .+..+.+. .+.++++...++. |.++++
T Consensus 334 ~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 334 VILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred EEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence 4454443 3677788765322222 322333 44555554 2334555666775 555665
No 264
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.91 E-value=4.6e-06 Score=71.46 Aligned_cols=227 Identities=11% Similarity=-0.013 Sum_probs=142.1
Q ss_pred EEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEe--CCeEEEEeCCCCEEEEee--
Q psy9936 13 IYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQ--KDWVYIYDNQGIELHCLK-- 88 (315)
Q Consensus 13 v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~~~~~~~~~~~~-- 88 (315)
-.|.+..+ ..+|+.+. ...|+.+++.+............+..++|.+.+..|..+. .+.|+.+++++.....+.
T Consensus 79 ~~C~~~~~-~~~l~~~~-~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~ 156 (386)
T 3v65_B 79 RSCKALGP-EPVLLFAN-RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST 156 (386)
T ss_dssp SCEEECSS-CCEEEEEC-BSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECS
T ss_pred CeECCccc-cceeEeec-CccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeC
Confidence 34555555 33555443 4568889988776655555556788999998655555443 678999999776544432
Q ss_pred cCCceEEEEEcCCC-ceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEc-CC-CeEEEEcCCCCc
Q psy9936 89 VLNKVTRMEFLPYH-FLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGH-RN-GTVTMWSPTVQK 165 (315)
Q Consensus 89 ~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~-~d-~~i~i~d~~~~~ 165 (315)
.......+++.+.+ .++++-...+.|.++++........+.........++++|.+..|+... .. +.|..+++....
T Consensus 157 ~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~ 236 (386)
T 3v65_B 157 GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG 236 (386)
T ss_dssp SCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS
T ss_pred CCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC
Confidence 22456788998754 4555556677899998874433333333345678999999776555544 34 689888887443
Q ss_pred ceeEeecccccEEEEEECCCCCEEEEe-eCCCcEEEEEccCCCCCeeEeccC-CCceeEEEccCCeEEEE-cCCEEEecC
Q psy9936 166 PLASLLCHKAGIQSVAVNHTGTYMATS-AGDSQLRIWDVRNLEGPLNTFRTR-TPINNLAFSQRGLLATS-RGNIVEFLK 242 (315)
Q Consensus 166 ~~~~~~~~~~~i~~~~~sp~g~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~-~~v~~~~~s~~g~~~~~-~~~~i~~~~ 242 (315)
........-...+.|+|+|++..|+.+ +..+.|..+|+... .....+... .....+++..+.+|.+. ..+.|..++
T Consensus 237 ~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~-~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 237 RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS-HRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp CEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSC-SCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred cEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCC-eeEEEEECCCCCceEEEEECCEEEEeeCCCCeEEEEE
Confidence 222222233467899999876666555 45667999998754 333333222 24677777544455554 356666544
No 265
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.90 E-value=6e-06 Score=69.76 Aligned_cols=201 Identities=5% Similarity=-0.094 Sum_probs=128.2
Q ss_pred CcEEEEEEcCCCCEEE-EEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEE-EEEe-CCeEEEEeCCCCEEEE
Q psy9936 11 FGIYRMNYTKNGRHLL-LGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMF-AVAQ-KDWVYIYDNQGIELHC 86 (315)
Q Consensus 11 ~~v~~~~~s~~~~~l~-~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l-~~~~-~~~i~i~~~~~~~~~~ 86 (315)
..+..++|++.+..|. +-...+.|+.+++.+......+. .......+++.+.+..| .+.. .+.|.+.++++.....
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~ 152 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV 152 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEE
Confidence 4467899997655554 44567889999987765444333 23456788888754444 4433 5789999997754433
Q ss_pred ee--cCCceEEEEEcCCCceEEEE-cCC-CeEEEEEccCCeEEEEe-ccCCCCeEEEEEcCCCCEEEEE-cCCCeEEEEc
Q psy9936 87 LK--VLNKVTRMEFLPYHFLLATA-SEE-GYLSWLDTSIGKIVSDF-SAKKGKLSVMTQNPYNACICLG-HRNGTVTMWS 160 (315)
Q Consensus 87 ~~--~~~~v~~~~~~~~~~~l~~~-~~d-~~i~~~d~~~~~~~~~~-~~~~~~v~~~~~~p~~~~l~~~-~~d~~i~i~d 160 (315)
+. .......++++|.+..|+.+ ... +.|..+++... ....+ ...-...+.++++|++..|+.+ ...+.|..+|
T Consensus 153 l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~ 231 (349)
T 3v64_C 153 LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN 231 (349)
T ss_dssp EECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC-CcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEe
Confidence 32 23667899999965554444 444 78999988643 33333 2233457899999877655554 4567899999
Q ss_pred CCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEec
Q psy9936 161 PTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFR 214 (315)
Q Consensus 161 ~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 214 (315)
+........+.........+++ ..+.++++-...+.|..++..++ .....+.
T Consensus 232 ~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G-~~~~~i~ 283 (349)
T 3v64_C 232 LDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTG-KNQEIIR 283 (349)
T ss_dssp TTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTC-CSCEEEE
T ss_pred CCCCceEEEEeCCCCCceEEEE-ECCEEEEecCCCCeEEEEEccCC-CccEEec
Confidence 8754332223333445677888 34555555556778888886666 5555554
No 266
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.89 E-value=4.1e-07 Score=83.70 Aligned_cols=202 Identities=18% Similarity=0.242 Sum_probs=132.3
Q ss_pred CCeEEEEEccCceEEEEecCC--Cc------------------------------eeEEEEeecCcEEEEEe-CC-----
Q psy9936 31 RGHVAAFDWVRKTLACEMNVM--EE------------------------------VYDIKWLHLETMFAVAQ-KD----- 72 (315)
Q Consensus 31 dg~i~v~~~~~~~~~~~~~~~--~~------------------------------v~~~~~~~~~~~l~~~~-~~----- 72 (315)
+|.|+.+|..+|+.+..+... .+ ...+++.|+..++.++. ++
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~ 256 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNR 256 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCcccc
Confidence 588999999999988776521 10 11357777666666654 33
Q ss_pred --------------eEEEEeCC-CCEEEEeecC----------CceEEEEEcCCCc---eEEEEcCCCeEEEEEccCCeE
Q psy9936 73 --------------WVYIYDNQ-GIELHCLKVL----------NKVTRMEFLPYHF---LLATASEEGYLSWLDTSIGKI 124 (315)
Q Consensus 73 --------------~i~i~~~~-~~~~~~~~~~----------~~v~~~~~~~~~~---~l~~~~~d~~i~~~d~~~~~~ 124 (315)
.|..+|.. ++.+...... .+.....+..+|+ .++.++.+|.++++|..+|+.
T Consensus 257 ~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 257 EVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKL 336 (668)
T ss_dssp HHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCE
Confidence 48889984 5544444321 2222233334664 688899999999999999988
Q ss_pred EEEeccCC-----------CC-------------------------eEEEEEcCCCCEEEEE------------------
Q psy9936 125 VSDFSAKK-----------GK-------------------------LSVMTQNPYNACICLG------------------ 150 (315)
Q Consensus 125 ~~~~~~~~-----------~~-------------------------v~~~~~~p~~~~l~~~------------------ 150 (315)
+....... +. -..++++|+..++++.
T Consensus 337 l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~ 416 (668)
T 1kv9_A 337 ISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTR 416 (668)
T ss_dssp EEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCC
T ss_pred eccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccc
Confidence 74432211 00 0126778876665541
Q ss_pred ------------------cCCCeEEEEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeE
Q psy9936 151 ------------------HRNGTVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNT 212 (315)
Q Consensus 151 ------------------~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~ 212 (315)
..+|.|..||+.+++.+.+...+ .+.....+...+.++++++.|+.++.||.+++ +.+..
T Consensus 417 ~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG-~~l~~ 494 (668)
T 1kv9_A 417 KAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSADKG-EALWQ 494 (668)
T ss_dssp SSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTC-CEEEE
T ss_pred cccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCC-CCCcCceeEeCCCEEEEECCcccchhhhhhcC-hhheE
Confidence 12488999999999988777632 33333344556788999999999999999999 88888
Q ss_pred eccCCCc--eeEEEccCCe-EEEEc
Q psy9936 213 FRTRTPI--NNLAFSQRGL-LATSR 234 (315)
Q Consensus 213 ~~~~~~v--~~~~~s~~g~-~~~~~ 234 (315)
+....++ .-+.+..+|. +++.+
T Consensus 495 ~~~~~~~~~~p~~~~~~G~~yva~~ 519 (668)
T 1kv9_A 495 FEAQSGIVAAPMTFELAGRQYVAIM 519 (668)
T ss_dssp EECSSCCCSCCEEEEETTEEEEEEE
T ss_pred ecCCCCcccCceEEEECCEEEEEEE
Confidence 8776543 3455566774 44433
No 267
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.89 E-value=1.9e-06 Score=68.93 Aligned_cols=189 Identities=6% Similarity=0.109 Sum_probs=124.6
Q ss_pred CCceeEEEEeecCcEE-EEEe-CCeEEEEeCCCCEEEEeec--CCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeE--
Q psy9936 51 MEEVYDIKWLHLETMF-AVAQ-KDWVYIYDNQGIELHCLKV--LNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKI-- 124 (315)
Q Consensus 51 ~~~v~~~~~~~~~~~l-~~~~-~~~i~i~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~-- 124 (315)
...+..++|.|++..| ++.. ++.|...|.++..+..+.. ......+++.+++.++++.-.++.+.++++.....
T Consensus 26 ~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~ 105 (255)
T 3qqz_A 26 TNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVK 105 (255)
T ss_dssp CSCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEE
T ss_pred ccCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeee
Confidence 3569999999976544 4444 5789999998777666543 35788899999888767666678899998865432
Q ss_pred -EEEec------cCCCCeEEEEEcCCCCEEEEEcCCCeEEEEcCC---CCcceeEee-------cccccEEEEEECCCC-
Q psy9936 125 -VSDFS------AKKGKLSVMTQNPYNACICLGHRNGTVTMWSPT---VQKPLASLL-------CHKAGIQSVAVNHTG- 186 (315)
Q Consensus 125 -~~~~~------~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~~---~~~~~~~~~-------~~~~~i~~~~~sp~g- 186 (315)
+.... ........++|+|.++.|+++.......+|.++ ....+..+. .+-..+.+++++|..
T Consensus 106 ~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg 185 (255)
T 3qqz_A 106 ILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKN 185 (255)
T ss_dssp EEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTT
T ss_pred eeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCC
Confidence 22221 123346899999999877777665444455443 112222221 122356889999974
Q ss_pred CEEEEeeCCCcEEEEEccCCCCCeeEeccCC----------CceeEEEccCC-eEEEEcCCEEEec
Q psy9936 187 TYMATSAGDSQLRIWDVRNLEGPLNTFRTRT----------PINNLAFSQRG-LLATSRGNIVEFL 241 (315)
Q Consensus 187 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~----------~v~~~~~s~~g-~~~~~~~~~i~~~ 241 (315)
.+++.+..+..+.++|... +++..+.... ..-.|+|+++| +|+++..+.+..+
T Consensus 186 ~lliLS~~s~~L~~~d~~g--~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n~~y~f 249 (255)
T 3qqz_A 186 TLLVLSHESRALQEVTLVG--EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRF 249 (255)
T ss_dssp EEEEEETTTTEEEEECTTC--CEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTTEEEEE
T ss_pred eEEEEECCCCeEEEEcCCC--CEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCceEEEE
Confidence 4555666677888998764 5555554331 35889999999 5777777765543
No 268
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.89 E-value=1.1e-06 Score=79.43 Aligned_cols=160 Identities=17% Similarity=0.180 Sum_probs=103.6
Q ss_pred CeEEEEeCC-CCEEEEeec--CC-----ceE---EEEEc-CCC---ceEEEEcCCCeEEEEEccCCeEEEEeccCC----
Q psy9936 72 DWVYIYDNQ-GIELHCLKV--LN-----KVT---RMEFL-PYH---FLLATASEEGYLSWLDTSIGKIVSDFSAKK---- 132 (315)
Q Consensus 72 ~~i~i~~~~-~~~~~~~~~--~~-----~v~---~~~~~-~~~---~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~---- 132 (315)
+.|.-+|.. ++.+..... +. .+. -+... .+| ..++.++.+|.++++|..+|+.+..+....
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~ 370 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITW 370 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCS
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccc
Confidence 579999984 555544432 11 111 12222 466 378889999999999999998876654321
Q ss_pred --------CC---------------------------------eEEEEEcCCCCEEEEEc--------------------
Q psy9936 133 --------GK---------------------------------LSVMTQNPYNACICLGH-------------------- 151 (315)
Q Consensus 133 --------~~---------------------------------v~~~~~~p~~~~l~~~~-------------------- 151 (315)
+. -..++++|+..++++..
T Consensus 371 ~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~ 450 (582)
T 1flg_A 371 ASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAY 450 (582)
T ss_dssp EEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCC
T ss_pred cccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCce
Confidence 00 01346677655554432
Q ss_pred -------------CCCeEEEEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCCC
Q psy9936 152 -------------RNGTVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRTP 218 (315)
Q Consensus 152 -------------~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 218 (315)
.+|.|..||+.+++.+.+.... .++..-.....+.++++++.|+.++.||.+++ +.+..+....+
T Consensus 451 ~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG-~~lW~~~~~~g 528 (582)
T 1flg_A 451 LGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSG-KELWKFQTGSG 528 (582)
T ss_dssp CCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTC-CEEEEEECSSC
T ss_pred eccceeecCCCCCCcceEEEEECCCCCEEEEecCC-CCCcccceEeCCCEEEEECCCCcEEEEECCCC-CEEEEecCCCC
Confidence 3588999999999988776532 22221112224667888999999999999999 88988887765
Q ss_pred ce--eEEEccCCe-EEEE
Q psy9936 219 IN--NLAFSQRGL-LATS 233 (315)
Q Consensus 219 v~--~~~~s~~g~-~~~~ 233 (315)
+. -+.|..+|+ |++.
T Consensus 529 ~~a~P~~y~~~G~qYv~~ 546 (582)
T 1flg_A 529 IVSPPITWEQDGEQYLGV 546 (582)
T ss_dssp CCSCCEEEEETTEEEEEE
T ss_pred cccCceEEEECCEEEEEE
Confidence 43 477778884 5543
No 269
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.88 E-value=7.2e-06 Score=70.27 Aligned_cols=213 Identities=5% Similarity=-0.102 Sum_probs=134.4
Q ss_pred CCcEEEEEEcCCCCEE-EEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEE-e-CCeEEEEeCCCCEEE
Q psy9936 10 QFGIYRMNYTKNGRHL-LLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVA-Q-KDWVYIYDNQGIELH 85 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l-~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~-~~~i~i~~~~~~~~~ 85 (315)
...+..++|++.+..| ++-...+.|+.+++.+......+. .......+++.+.+..|..+ . .+.|.+.++++....
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~ 194 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK 194 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCE
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceE
Confidence 3457789999765544 455567889999988765444443 23356778888754444444 3 578999998765433
Q ss_pred Eee--cCCceEEEEEcCCCceEEEEc-CC-CeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEE-cCCCeEEEEc
Q psy9936 86 CLK--VLNKVTRMEFLPYHFLLATAS-EE-GYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLG-HRNGTVTMWS 160 (315)
Q Consensus 86 ~~~--~~~~v~~~~~~~~~~~l~~~~-~d-~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~-~~d~~i~i~d 160 (315)
.+. .......+++.|.+..|+.+. .. +.|..+++............-...+.++++|++..|+.+ ...+.|..+|
T Consensus 195 ~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d 274 (386)
T 3v65_B 195 VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN 274 (386)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEEC
T ss_pred EeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEe
Confidence 332 236678999999766555543 34 689999887433322233334457899999876655554 5567899999
Q ss_pred CCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccC-CCceeEEE
Q psy9936 161 PTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTR-TPINNLAF 224 (315)
Q Consensus 161 ~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~v~~~~~ 224 (315)
+........+.........+++ ..+.++++....+.|..++..++ ..+..+... ..+..+++
T Consensus 275 ~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G-~~~~~i~~~~~~p~gi~v 337 (386)
T 3v65_B 275 LDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTG-KNQEIIRNKLHFPMDIHT 337 (386)
T ss_dssp TTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTC-CSCEEEECSCSCCCCEEE
T ss_pred CCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCC-cceEEEccCCCCCceEEE
Confidence 8754333233323345678888 44555556666778999987666 555555433 23445544
No 270
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.85 E-value=6.7e-07 Score=82.27 Aligned_cols=221 Identities=14% Similarity=0.144 Sum_probs=141.9
Q ss_pred CCEEEEEcCCCeEEEEEccCceEEEEecCCC-----ceeEEEEeecCcEEEEEe------CCeEEEEeC-CCCEEEEeec
Q psy9936 22 GRHLLLGGKRGHVAAFDWVRKTLACEMNVME-----EVYDIKWLHLETMFAVAQ------KDWVYIYDN-QGIELHCLKV 89 (315)
Q Consensus 22 ~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~------~~~i~i~~~-~~~~~~~~~~ 89 (315)
+..+++++.++.|..+|..+|+.+..+.... .+.+.-...++.+++... ++.|+.+|. +++.+..+..
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 4577788889999999999999887765321 121111112555554433 478999998 4565555432
Q ss_pred C--C------------------------------ceEEEEEcCCCceEEEEcCCC-------------------eEEEEE
Q psy9936 90 L--N------------------------------KVTRMEFLPYHFLLATASEEG-------------------YLSWLD 118 (315)
Q Consensus 90 ~--~------------------------------~v~~~~~~~~~~~l~~~~~d~-------------------~i~~~d 118 (315)
. . ....+++.|+...++.++.++ .|..+|
T Consensus 197 ~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD 276 (668)
T 1kv9_A 197 VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIR 276 (668)
T ss_dssp SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEEC
T ss_pred cCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEc
Confidence 1 0 012468888888888887766 399999
Q ss_pred ccCCeEEEEecc--CC-------CCeEEEEEcCCCC---EEEEEcCCCeEEEEcCCCCcceeEeeccc------------
Q psy9936 119 TSIGKIVSDFSA--KK-------GKLSVMTQNPYNA---CICLGHRNGTVTMWSPTVQKPLASLLCHK------------ 174 (315)
Q Consensus 119 ~~~~~~~~~~~~--~~-------~~v~~~~~~p~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~------------ 174 (315)
..+|+.+-.++. |. .+.....+..+|+ .++.++.+|.+.++|..+++.+.......
T Consensus 277 ~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g 356 (668)
T 1kv9_A 277 PDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATG 356 (668)
T ss_dssp TTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTC
T ss_pred CCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccC
Confidence 999998877654 22 2222223334665 68889999999999999998874432111
Q ss_pred ccE------------------------EEEEECCCCCEEEEe------------------------------------eC
Q psy9936 175 AGI------------------------QSVAVNHTGTYMATS------------------------------------AG 194 (315)
Q Consensus 175 ~~i------------------------~~~~~sp~g~~l~~~------------------------------------~~ 194 (315)
.++ ..++++|+...+++. ..
T Consensus 357 ~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~ 436 (668)
T 1kv9_A 357 RPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVV 436 (668)
T ss_dssp CEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGC
T ss_pred CccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCc
Confidence 000 125777776655542 12
Q ss_pred CCcEEEEEccCCCCCeeEeccCCCceeEEEcc-CCe-EEEEcCCEEEecCC
Q psy9936 195 DSQLRIWDVRNLEGPLNTFRTRTPINNLAFSQ-RGL-LATSRGNIVEFLKP 243 (315)
Q Consensus 195 d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~-~g~-~~~~~~~~i~~~~~ 243 (315)
+|.|..||+.++ +.+.....+.+.....+.. +++ ++++.++.++.++.
T Consensus 437 ~g~l~A~D~~tG-~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~ 486 (668)
T 1kv9_A 437 SGALLAWDPVKQ-KAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSA 486 (668)
T ss_dssp EEEEEEEETTTT-EEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEET
T ss_pred cceEEEEeCCCC-cEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhh
Confidence 378999999998 7777766655554333333 344 55566899987765
No 271
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.85 E-value=1.5e-05 Score=68.57 Aligned_cols=217 Identities=9% Similarity=-0.032 Sum_probs=137.7
Q ss_pred EEEEEcCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEe--CCeEEEEeCCCC-----EEEEee-cCCceEE
Q psy9936 24 HLLLGGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQ--KDWVYIYDNQGI-----ELHCLK-VLNKVTR 95 (315)
Q Consensus 24 ~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~~~~~~-----~~~~~~-~~~~v~~ 95 (315)
+|+.+. ...|+..++..............+..++|.+.+..|..+. .+.|+.+++++. ....+. .......
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g 163 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 163 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEE
T ss_pred eeEEec-cceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCccc
Confidence 555443 4679999988776665666667789999998655555553 678999998652 222222 3356788
Q ss_pred EEEcCC-CceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEc--CCCeEEEEcCCCCcceeEeec
Q psy9936 96 MEFLPY-HFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGH--RNGTVTMWSPTVQKPLASLLC 172 (315)
Q Consensus 96 ~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~ 172 (315)
+++.+. ++++++-...+.|.+.++........+.........++++|.+..|+... ..+.|...++........+..
T Consensus 164 lavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~ 243 (400)
T 3p5b_L 164 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE 243 (400)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECS
T ss_pred EEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEEC
Confidence 999984 55555666778999999875544444443445588999999766665554 246899998874433322333
Q ss_pred ccccEEEEEECCCCCEEEEee-CCCcEEEEEccCCCCCeeEeccC---CCceeEEEccCCeEEEE-cCCEEEecC
Q psy9936 173 HKAGIQSVAVNHTGTYMATSA-GDSQLRIWDVRNLEGPLNTFRTR---TPINNLAFSQRGLLATS-RGNIVEFLK 242 (315)
Q Consensus 173 ~~~~i~~~~~sp~g~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~---~~v~~~~~s~~g~~~~~-~~~~i~~~~ 242 (315)
.-...+.|+++|++..|+.+. ..+.|..+|+... ......... .....+++..+..|.+. ..+.|..++
T Consensus 244 ~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~-~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~ 317 (400)
T 3p5b_L 244 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-NRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSAN 317 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-CCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEE
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC-ccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEE
Confidence 335778999999877776664 4568999998764 333333321 13456776554454443 345555443
No 272
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.84 E-value=2.7e-05 Score=64.70 Aligned_cols=200 Identities=9% Similarity=-0.016 Sum_probs=126.2
Q ss_pred CcEEEEEEcCCCCEE-EEEcCCCeEEEEEccC----ceEEEEec-CCCceeEEEEeecC-cEEEEEe-CCeEEEEeCCCC
Q psy9936 11 FGIYRMNYTKNGRHL-LLGGKRGHVAAFDWVR----KTLACEMN-VMEEVYDIKWLHLE-TMFAVAQ-KDWVYIYDNQGI 82 (315)
Q Consensus 11 ~~v~~~~~s~~~~~l-~~~~~dg~i~v~~~~~----~~~~~~~~-~~~~v~~~~~~~~~-~~l~~~~-~~~i~i~~~~~~ 82 (315)
..+.+++|++++..| ++-...+.|..+++.+ ......+. .......+++.+.+ .++++-. .+.|.+++.++.
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~ 109 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 109 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC
Confidence 456789999866555 4555568899999876 22222232 22456788988754 4444433 679999999876
Q ss_pred EEEEee--cCCceEEEEEcCCCceEEEEcC-C-CeEEEEEccCCeEEEEe-ccCCCCeEEEEEcCCCCEEEEE-cCCCeE
Q psy9936 83 ELHCLK--VLNKVTRMEFLPYHFLLATASE-E-GYLSWLDTSIGKIVSDF-SAKKGKLSVMTQNPYNACICLG-HRNGTV 156 (315)
Q Consensus 83 ~~~~~~--~~~~v~~~~~~~~~~~l~~~~~-d-~~i~~~d~~~~~~~~~~-~~~~~~v~~~~~~p~~~~l~~~-~~d~~i 156 (315)
....+. .......++++|.+..|+.+.. . +.|..+++. |.....+ ...-...+.++++|++..|+.+ ...+.|
T Consensus 110 ~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I 188 (316)
T 1ijq_A 110 KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 188 (316)
T ss_dssp SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred ceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeE
Confidence 544433 3367889999997655555443 3 689888886 4333333 2233567899999987766555 456799
Q ss_pred EEEcCCCCcceeEeec---ccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEec
Q psy9936 157 TMWSPTVQKPLASLLC---HKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFR 214 (315)
Q Consensus 157 ~i~d~~~~~~~~~~~~---~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 214 (315)
..+|+... ....+.. .......+++. .+.++++-...+.|..++..++ ..+..+.
T Consensus 189 ~~~d~dg~-~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g-~~~~~i~ 246 (316)
T 1ijq_A 189 SSIDVNGG-NRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTG-SDVNLLA 246 (316)
T ss_dssp EEEETTSC-SCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTC-CCCEEEE
T ss_pred EEEecCCC-ceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCC-cceEEEe
Confidence 99999743 3333321 12345678884 3555555566778999998776 5555554
No 273
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.83 E-value=5.2e-06 Score=68.94 Aligned_cols=189 Identities=15% Similarity=0.221 Sum_probs=128.0
Q ss_pred CCEEEEEcCCCeEEEEEccCceEEEEecCCCceeEEEEeec----Cc---EEEEEe----CCeEEEEeC--CCCEEEEee
Q psy9936 22 GRHLLLGGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHL----ET---MFAVAQ----KDWVYIYDN--QGIELHCLK 88 (315)
Q Consensus 22 ~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~l~~~~----~~~i~i~~~--~~~~~~~~~ 88 (315)
..+++.....+.+.+||+ +|+.+..+.. +.++.+..-|+ |+ +++++. +++|.+|++ ....+..+.
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~ 117 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMT 117 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECS
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeecc
Confidence 345555556778999999 7787777754 66777777663 22 333332 368999966 444555552
Q ss_pred c-------C-CceEEEEE--cCC-Cc-eEEEEcCCCeEEEEEcc-------CCeEEEEeccCCCCeEEEEEcCCCCEEEE
Q psy9936 89 V-------L-NKVTRMEF--LPY-HF-LLATASEEGYLSWLDTS-------IGKIVSDFSAKKGKLSVMTQNPYNACICL 149 (315)
Q Consensus 89 ~-------~-~~v~~~~~--~~~-~~-~l~~~~~d~~i~~~d~~-------~~~~~~~~~~~~~~v~~~~~~p~~~~l~~ 149 (315)
. . ..+..+++ +|. +. ++++...+|.+..|++. +.+.++++... +.+..+...+....|+.
T Consensus 118 ~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-sq~EgcvvDd~~g~Lyv 196 (355)
T 3amr_A 118 DPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-SQTEGMAADDEYGRLYI 196 (355)
T ss_dssp CTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-SCEEEEEEETTTTEEEE
T ss_pred ccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-CCcceEEEcCCCCeEEE
Confidence 2 1 45666777 775 43 67788889999999883 34667777654 46888899998889999
Q ss_pred EcCCCeEEEEcCC-----CCcceeEee-cc-cccEEEEEE--CCCCC-EEEEee-CCCcEEEEEcc-CCCCCeeEec
Q psy9936 150 GHRNGTVTMWSPT-----VQKPLASLL-CH-KAGIQSVAV--NHTGT-YMATSA-GDSQLRIWDVR-NLEGPLNTFR 214 (315)
Q Consensus 150 ~~~d~~i~i~d~~-----~~~~~~~~~-~~-~~~i~~~~~--sp~g~-~l~~~~-~d~~i~iwd~~-~~~~~~~~~~ 214 (315)
+-++..|..||.+ +++.+..+. ++ ...+..|++ .++++ ||++++ .+++..+||.. +. +.+..+.
T Consensus 197 ~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~-~~vg~f~ 272 (355)
T 3amr_A 197 AEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKN-KYVADFR 272 (355)
T ss_dssp EETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTC-CEEEEEE
T ss_pred ecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCC-cEEEEEE
Confidence 9998888888865 233444432 22 246888888 56666 666555 67799999997 44 6666664
No 274
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.80 E-value=2.9e-07 Score=84.69 Aligned_cols=243 Identities=9% Similarity=-0.019 Sum_probs=140.1
Q ss_pred EEEEcC-CCCEEEEEcCCC-----------eEEEEEccCceEEE--Eec--CCCceeEEEEeecCcEEEEEe--CCeEEE
Q psy9936 15 RMNYTK-NGRHLLLGGKRG-----------HVAAFDWVRKTLAC--EMN--VMEEVYDIKWLHLETMFAVAQ--KDWVYI 76 (315)
Q Consensus 15 ~~~~s~-~~~~l~~~~~dg-----------~i~v~~~~~~~~~~--~~~--~~~~v~~~~~~~~~~~l~~~~--~~~i~i 76 (315)
++++.| +++.++.|+.+. .+.+||..+++... .+. +.....++++.+++++++.|+ +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 566777 888888876532 58899988876432 222 222234567788999998886 458999
Q ss_pred EeCCCCEEEEeecC---CceEEEEEcCCCceEEEEc-CC-----CeEEEEEccCCeEEEEe-----ccCCCCeEEEEEcC
Q psy9936 77 YDNQGIELHCLKVL---NKVTRMEFLPYHFLLATAS-EE-----GYLSWLDTSIGKIVSDF-----SAKKGKLSVMTQNP 142 (315)
Q Consensus 77 ~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~-~d-----~~i~~~d~~~~~~~~~~-----~~~~~~v~~~~~~p 142 (315)
||........+... ..-.+++..+++++++.|+ .+ ..+.+||..+.+-...- ......- ...+..
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~-~~~~~~ 348 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADK-QGLYRS 348 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCT-TGGGTT
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccc-cceeec
Confidence 99976655554321 2223456667899999988 34 46999999877644320 0000000 012234
Q ss_pred CCCEEEEEcCC---------CeEEEEcCCCCcceeEeecccc---------cEEEEEEC-CCCCEEEEeeCCC-------
Q psy9936 143 YNACICLGHRN---------GTVTMWSPTVQKPLASLLCHKA---------GIQSVAVN-HTGTYMATSAGDS------- 196 (315)
Q Consensus 143 ~~~~l~~~~~d---------~~i~i~d~~~~~~~~~~~~~~~---------~i~~~~~s-p~g~~l~~~~~d~------- 196 (315)
++..++.|+.+ ..+..||..+.........+.. .-.++.|. .++++++.|+.++
T Consensus 349 ~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~ 428 (656)
T 1k3i_A 349 DNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDAT 428 (656)
T ss_dssp TCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCC
T ss_pred CCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcC
Confidence 55555555444 4578888887654333221111 22344443 3678888887542
Q ss_pred ----cEEEEEccCCCCCeeEec---cCC--CceeEEEccCCeEEEEcC-------------CEEEecCC-----------
Q psy9936 197 ----QLRIWDVRNLEGPLNTFR---TRT--PINNLAFSQRGLLATSRG-------------NIVEFLKP----------- 243 (315)
Q Consensus 197 ----~i~iwd~~~~~~~~~~~~---~~~--~v~~~~~s~~g~~~~~~~-------------~~i~~~~~----------- 243 (315)
.+.+||..+. . ...+. .+. .-.+++..|+|.+++.++ ..+..|+|
T Consensus 429 ~~~~~v~~yd~~~~-~-W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~ 506 (656)
T 1k3i_A 429 TNAHIITLGEPGTS-P-NTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPN 506 (656)
T ss_dssp CCEEEEECCSTTSC-C-EEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCC
T ss_pred CcceEEEcCCCCCC-C-eeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCC
Confidence 5778887764 2 22221 122 134556778885444332 23555555
Q ss_pred ------C-ceeecccccccccCCc
Q psy9936 244 ------P-EINFEPRRKANKAGGS 260 (315)
Q Consensus 244 ------~-~~~~~~~~~~~~~~~~ 260 (315)
. ...+.|+++.++.|+.
T Consensus 507 ~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 507 SIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp SSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCccccccHhhcCCCcEEEecCCC
Confidence 1 1234578888888774
No 275
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.79 E-value=8.9e-06 Score=76.33 Aligned_cols=226 Identities=11% Similarity=0.126 Sum_probs=145.7
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEe---c-CCCceeEEEEeecCcEEEEEeCCeEEEEeCCCCEEE
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEM---N-VMEEVYDIKWLHLETMFAVAQKDWVYIYDNQGIELH 85 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~---~-~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~~~~~~~ 85 (315)
...|.++...++|.+. .|+.++.|..|+..++...... . ....|.++...+++.+.+.+.++-+..++..+....
T Consensus 362 ~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~ 440 (781)
T 3v9f_A 362 NKVVSSVCDDGQGKLW-IGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQ 440 (781)
T ss_dssp SSCEEEEEECTTSCEE-EEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEE
T ss_pred CcceEEEEEcCCCCEE-EEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEE
Confidence 4568999988888654 4555556889997665432211 1 235688888887888877666678999998766655
Q ss_pred Eeec----CCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccC-----CCCeEEEEEcCCCCEEEEEcCCCeE
Q psy9936 86 CLKV----LNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAK-----KGKLSVMTQNPYNACICLGHRNGTV 156 (315)
Q Consensus 86 ~~~~----~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-----~~~v~~~~~~p~~~~l~~~~~d~~i 156 (315)
.+.. ...|.++...+++.+.+ |+. +-+..||..+++........ ...|.++...++|.+.+. +.++-+
T Consensus 441 ~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig-t~~~Gl 517 (781)
T 3v9f_A 441 IIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIG-TFGGGV 517 (781)
T ss_dssp ECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEE-ESSSCE
T ss_pred EeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEE-EcCCCE
Confidence 5542 35788998888876444 444 56899998876543322211 356899999998875554 443447
Q ss_pred EEEcCCCCcceeEeec----ccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccC-----CCceeEEEccC
Q psy9936 157 TMWSPTVQKPLASLLC----HKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTR-----TPINNLAFSQR 227 (315)
Q Consensus 157 ~i~d~~~~~~~~~~~~----~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-----~~v~~~~~s~~ 227 (315)
..||..+++ +..+.. ....|.++...++|.+.+.. .+|.+..||..+. . +..+... ..|.++..+++
T Consensus 518 ~~~~~~~~~-~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T-~~Glv~~~d~~~~-~-~~~~~~~~gl~~~~i~~i~~d~~ 593 (781)
T 3v9f_A 518 GIYTPDMQL-VRKFNQYEGFCSNTINQIYRSSKGQMWLAT-GEGLVCFPSARNF-D-YQVFQRKEGLPNTHIRAISEDKN 593 (781)
T ss_dssp EEECTTCCE-EEEECTTTTCSCSCEEEEEECTTSCEEEEE-TTEEEEESCTTTC-C-CEEECGGGTCSCCCCCEEEECSS
T ss_pred EEEeCCCCe-EEEccCCCCCCCCeeEEEEECCCCCEEEEE-CCCceEEECCCCC-c-EEEccccCCCCCceEEEEEECCC
Confidence 778887654 333321 23578899999999865544 4665488888775 3 3333321 24788999998
Q ss_pred CeEEEEcCCEEEecCC
Q psy9936 228 GLLATSRGNIVEFLKP 243 (315)
Q Consensus 228 g~~~~~~~~~i~~~~~ 243 (315)
|.+-++..+-|..++|
T Consensus 594 g~lW~~t~~Gl~~~~~ 609 (781)
T 3v9f_A 594 GNIWASTNTGISCYIT 609 (781)
T ss_dssp SCEEEECSSCEEEEET
T ss_pred CCEEEEcCCceEEEEC
Confidence 8644444433554444
No 276
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.78 E-value=2.3e-05 Score=65.21 Aligned_cols=217 Identities=7% Similarity=-0.057 Sum_probs=133.0
Q ss_pred EEEEEcCCCeEEEEEccCce--EEEEecCCCceeEEEEeecCcEEEEEe--CCeEEEEeCCCCE---EEEeecCCceEEE
Q psy9936 24 HLLLGGKRGHVAAFDWVRKT--LACEMNVMEEVYDIKWLHLETMFAVAQ--KDWVYIYDNQGIE---LHCLKVLNKVTRM 96 (315)
Q Consensus 24 ~l~~~~~dg~i~v~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~~~~~~~---~~~~~~~~~v~~~ 96 (315)
+|+.+. ...|+.+++++.. ....+.....+..+.|.+.+..|..+. .+.|+.+++++.. ............+
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~gl 84 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGL 84 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEE
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEE
Confidence 455443 4679999988763 222222234567889998655555443 6789999986542 1222233567789
Q ss_pred EEcCC-CceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEc--CCCeEEEEcCCCCcceeEe-ec
Q psy9936 97 EFLPY-HFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGH--RNGTVTMWSPTVQKPLASL-LC 172 (315)
Q Consensus 97 ~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~--~d~~i~i~d~~~~~~~~~~-~~ 172 (315)
++.+. +.++++-...+.|.++++........+.........++++|.+..|+.+. ..+.|...+++.. ....+ ..
T Consensus 85 avd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~ 163 (318)
T 3sov_A 85 ACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS-SRFIIINS 163 (318)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSC-SCEEEECS
T ss_pred EEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCC-CeEEEEEC
Confidence 99975 45555556678999999874433323333445678999999766665554 3578998888743 33333 22
Q ss_pred ccccEEEEEECCCCCEEEEee-CCCcEEEEEccCCCCCeeEecc-CCCceeEEEccCCeEEEE-cCCEEEecCC
Q psy9936 173 HKAGIQSVAVNHTGTYMATSA-GDSQLRIWDVRNLEGPLNTFRT-RTPINNLAFSQRGLLATS-RGNIVEFLKP 243 (315)
Q Consensus 173 ~~~~i~~~~~sp~g~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~-~~~v~~~~~s~~g~~~~~-~~~~i~~~~~ 243 (315)
.-...+.++|+|++..|+.+. ..+.|..+|+... ........ ......+++..++.|.+- ..+.|...++
T Consensus 164 ~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~-~~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 164 EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT-NRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNK 236 (318)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred CCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCC-ceEEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEEC
Confidence 234678999999776666554 5678999998754 33222221 223567777665555443 3556664443
No 277
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.78 E-value=3.4e-06 Score=76.27 Aligned_cols=202 Identities=13% Similarity=0.097 Sum_probs=127.4
Q ss_pred CCCeEEEEEccCceEEEEecCCCce---------------------------------------eEEEEeecCcEEEEEe
Q psy9936 30 KRGHVAAFDWVRKTLACEMNVMEEV---------------------------------------YDIKWLHLETMFAVAQ 70 (315)
Q Consensus 30 ~dg~i~v~~~~~~~~~~~~~~~~~v---------------------------------------~~~~~~~~~~~l~~~~ 70 (315)
.+|.|+.+|..+|+.+..+....+. ..+++.+...++..+.
T Consensus 180 ~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~ 259 (599)
T 1w6s_A 180 VRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGT 259 (599)
T ss_dssp CCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEEC
T ss_pred CCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeC
Confidence 3789999999999988776633221 1234555555555543
Q ss_pred -C----------------CeEEEEeCC-CCEEEEeecC-C---------ceEEEEEc-CCC---ceEEEEcCCCeEEEEE
Q psy9936 71 -K----------------DWVYIYDNQ-GIELHCLKVL-N---------KVTRMEFL-PYH---FLLATASEEGYLSWLD 118 (315)
Q Consensus 71 -~----------------~~i~i~~~~-~~~~~~~~~~-~---------~v~~~~~~-~~~---~~l~~~~~d~~i~~~d 118 (315)
+ +.|.-+|.+ ++........ . ...-+... .+| ..++.++.+|.++++|
T Consensus 260 g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD 339 (599)
T 1w6s_A 260 GNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLD 339 (599)
T ss_dssp CCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEE
T ss_pred CCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEE
Confidence 3 378889985 4444333321 0 11112222 467 5677889999999999
Q ss_pred ccCCeEEEEeccCC------------C-Ce--------------------------EEEEEcCCCCEEEEE---------
Q psy9936 119 TSIGKIVSDFSAKK------------G-KL--------------------------SVMTQNPYNACICLG--------- 150 (315)
Q Consensus 119 ~~~~~~~~~~~~~~------------~-~v--------------------------~~~~~~p~~~~l~~~--------- 150 (315)
..+|+.+....... + ++ ..++++|+..++++.
T Consensus 340 ~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~ 419 (599)
T 1w6s_A 340 RTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWE 419 (599)
T ss_dssp TTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEE
T ss_pred CCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeee
Confidence 99998876654211 1 01 235677766655442
Q ss_pred ------------------------c------CCCeEEEEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEE
Q psy9936 151 ------------------------H------RNGTVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRI 200 (315)
Q Consensus 151 ------------------------~------~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~i 200 (315)
+ ..|.|..||+.+++.+.+... ..+...-.+.-.+.+++.++.|+.++.
T Consensus 420 ~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~-~~~~~~g~~~tagg~vf~gt~dg~l~A 498 (599)
T 1w6s_A 420 PFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKME-RFAVWGGTMATAGDLVFYGTLDGYLKA 498 (599)
T ss_dssp ECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEE
T ss_pred cccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecC-CCCccCcceEecCCEEEEECCCCeEEE
Confidence 1 347899999999988777652 222221112234667778999999999
Q ss_pred EEccCCCCCeeEeccCCCc--eeEEEccCCe-EEEE
Q psy9936 201 WDVRNLEGPLNTFRTRTPI--NNLAFSQRGL-LATS 233 (315)
Q Consensus 201 wd~~~~~~~~~~~~~~~~v--~~~~~s~~g~-~~~~ 233 (315)
||.+++ +.+..++...++ .-+.+..+|+ |++.
T Consensus 499 ~D~~tG-~~lW~~~l~~g~~~~P~~y~~~G~qyv~~ 533 (599)
T 1w6s_A 499 RDSDTG-DLLWKFKIPSGAIGYPMTYTHKGTQYVAI 533 (599)
T ss_dssp EETTTC-CEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred EECCCC-CEEEEeeCCCCcEeccEEEEeCCEEEEEE
Confidence 999999 888888766543 4466677884 4443
No 278
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.75 E-value=1.1e-05 Score=70.63 Aligned_cols=192 Identities=14% Similarity=0.091 Sum_probs=116.9
Q ss_pred cEEEEEEcCC-CC-EEEEEcCCCeEEEEEccCceEEEEecCC----CceeEEEE-------eecCcEEEEEeC-C-----
Q psy9936 12 GIYRMNYTKN-GR-HLLLGGKRGHVAAFDWVRKTLACEMNVM----EEVYDIKW-------LHLETMFAVAQK-D----- 72 (315)
Q Consensus 12 ~v~~~~~s~~-~~-~l~~~~~dg~i~v~~~~~~~~~~~~~~~----~~v~~~~~-------~~~~~~l~~~~~-~----- 72 (315)
....|+|+|. .. ++++....+.|++.|+.++.+....... .....++| ++++..|.++.+ +
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 4678999983 44 4444444467999999888876655422 25889999 999986666642 2
Q ss_pred --eEEEEeCCC--CE-----EEEeecCCceEEEEEcCC-CceEEEEcCCCeEEEEEcc-------CCeE-----------
Q psy9936 73 --WVYIYDNQG--IE-----LHCLKVLNKVTRMEFLPY-HFLLATASEEGYLSWLDTS-------IGKI----------- 124 (315)
Q Consensus 73 --~i~i~~~~~--~~-----~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~-------~~~~----------- 124 (315)
.|.+++... .- ...+........++++|+ +.++++-..++.|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred CceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 266775432 11 122333345567889995 5556666678889999997 5543
Q ss_pred EEE-ec-cCCCCeEEEEEcCCCCEEEEE-cCCCeEEEEcCC--CCcc--eeEeecc---c------------ccEE-EEE
Q psy9936 125 VSD-FS-AKKGKLSVMTQNPYNACICLG-HRNGTVTMWSPT--VQKP--LASLLCH---K------------AGIQ-SVA 181 (315)
Q Consensus 125 ~~~-~~-~~~~~v~~~~~~p~~~~l~~~-~~d~~i~i~d~~--~~~~--~~~~~~~---~------------~~i~-~~~ 181 (315)
... +. ........++|+|+|++|+.+ ...+.|+.++.. ++.. ...+-+. . .... .++
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~ 379 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVF 379 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEE
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEE
Confidence 111 21 123446889999999965444 567789986643 2221 1222221 0 1234 445
Q ss_pred EC-------CCCCEEEEeeCCCcEEEEEc
Q psy9936 182 VN-------HTGTYMATSAGDSQLRIWDV 203 (315)
Q Consensus 182 ~s-------p~g~~l~~~~~d~~i~iwd~ 203 (315)
.. ++|.++++-.....|+.++.
T Consensus 380 vd~~~~~~~~~g~lyVaD~~N~rIr~i~~ 408 (496)
T 3kya_A 380 VKNPDYTGEEEYDFYFVDRLNFCVRKVTP 408 (496)
T ss_dssp EECTTCCSSCCEEEEEEEGGGTEEEEECT
T ss_pred EccccccccCCCeEEEEECCCCEEEEEeC
Confidence 54 45666666566778888883
No 279
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.74 E-value=4e-05 Score=63.75 Aligned_cols=202 Identities=5% Similarity=-0.075 Sum_probs=126.3
Q ss_pred cEEEEEEcCCCC-EEEEEcCCCeEEEEEccCceE-EEEec-CCCceeEEEEeecC-cEEEEEe-CCeEEEEeCCCCEEEE
Q psy9936 12 GIYRMNYTKNGR-HLLLGGKRGHVAAFDWVRKTL-ACEMN-VMEEVYDIKWLHLE-TMFAVAQ-KDWVYIYDNQGIELHC 86 (315)
Q Consensus 12 ~v~~~~~s~~~~-~l~~~~~dg~i~v~~~~~~~~-~~~~~-~~~~v~~~~~~~~~-~~l~~~~-~~~i~i~~~~~~~~~~ 86 (315)
.+.+++|++.+. ++.+-...+.|..+++.+... ...+. .......+++.+.+ .++.+-. .+.|.++++++.....
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~ 115 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKV 115 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEE
Confidence 356788988554 445555678899999876532 11121 23456778888754 4444433 6789999997754444
Q ss_pred e--ecCCceEEEEEcCCCceEEEEc--CCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEE-cCCCeEEEEcC
Q psy9936 87 L--KVLNKVTRMEFLPYHFLLATAS--EEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLG-HRNGTVTMWSP 161 (315)
Q Consensus 87 ~--~~~~~v~~~~~~~~~~~l~~~~--~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~-~~d~~i~i~d~ 161 (315)
+ ........+++.|.+..|+.+. ..+.|..+++............-...+.++++|++..|+.+ ...+.|..+|+
T Consensus 116 l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~ 195 (318)
T 3sov_A 116 LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNL 195 (318)
T ss_dssp EECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcC
Confidence 3 2346778999999755555554 35789999886332222222233457899999976665554 55789999998
Q ss_pred CCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEecc
Q psy9936 162 TVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRT 215 (315)
Q Consensus 162 ~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 215 (315)
+.........+.......+++.. +.++.+-...+.|..++..++ .....+..
T Consensus 196 dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G-~~~~~i~~ 247 (318)
T 3sov_A 196 DGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTG-EGLREIHS 247 (318)
T ss_dssp TSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTC-CSCEEEEC
T ss_pred CCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCC-CceEEEeC
Confidence 74332222222344567777753 344555556778999998777 55555543
No 280
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.73 E-value=8.4e-05 Score=63.93 Aligned_cols=204 Identities=9% Similarity=-0.048 Sum_probs=128.1
Q ss_pred CCcEEEEEEcCCCCEEE-EEcCCCeEEEEEccCc----eEEEEec-CCCceeEEEEeec-CcEEEEEe-CCeEEEEeCCC
Q psy9936 10 QFGIYRMNYTKNGRHLL-LGGKRGHVAAFDWVRK----TLACEMN-VMEEVYDIKWLHL-ETMFAVAQ-KDWVYIYDNQG 81 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~-~~~~dg~i~v~~~~~~----~~~~~~~-~~~~v~~~~~~~~-~~~l~~~~-~~~i~i~~~~~ 81 (315)
-..+..++|++.+..|. +-...+.|+.+++... .....+. .......+++.+. +.++.+-. .+.|.+.++++
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g 190 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 190 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTT
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCC
Confidence 35678999998665554 4455678988888652 2222333 3346778898874 44444433 67899999987
Q ss_pred CEEEEee--cCCceEEEEEcCCCceEEEEcC--CCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEE-cCCCeE
Q psy9936 82 IELHCLK--VLNKVTRMEFLPYHFLLATASE--EGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLG-HRNGTV 156 (315)
Q Consensus 82 ~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~-~~d~~i 156 (315)
.....+. .......+++.|.+..|+.+.. .+.|...++........+...-...+.|+++|++..|+.+ ...+.|
T Consensus 191 ~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I 270 (400)
T 3p5b_L 191 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 270 (400)
T ss_dssp CSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEE
Confidence 6554433 3356889999997655555542 4689999987433333333333568999999887766665 456799
Q ss_pred EEEcCCCCcceeEeec--ccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEecc
Q psy9936 157 TMWSPTVQKPLASLLC--HKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRT 215 (315)
Q Consensus 157 ~i~d~~~~~~~~~~~~--~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 215 (315)
..+|++.......... .-.....+++. .+.++.+-...+.|..+|..++ ..+..+..
T Consensus 271 ~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G-~~~~~i~~ 329 (400)
T 3p5b_L 271 SSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTG-SDVNLLAE 329 (400)
T ss_dssp EEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSC-CCCEEEEC
T ss_pred EEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCC-CceEEEec
Confidence 9999875433222221 22345677773 3445555566678999997777 55555543
No 281
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.73 E-value=4e-05 Score=71.91 Aligned_cols=227 Identities=12% Similarity=0.035 Sum_probs=146.9
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEe-------c---CCCceeEEEEeecCcEEEEEeCCeEEEEeC
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEM-------N---VMEEVYDIKWLHLETMFAVAQKDWVYIYDN 79 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~-------~---~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~ 79 (315)
...|.++...++|.+ ..|+.++-|..++..+....... . ....|.++...++|.+.+.+.++-|..|+.
T Consensus 312 ~~~v~~i~~D~~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~ 390 (781)
T 3v9f_A 312 NASARYIFQDSFNNI-WIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFEN 390 (781)
T ss_dssp SSCEEEEEECSSCCE-EEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEET
T ss_pred CCeEEEEEEeCCCCE-EEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEEC
Confidence 467899999988864 45665666888987765433221 1 224588888888888877766677888988
Q ss_pred CCCEEEEee-----cCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEec--cCCCCeEEEEEcCCCCEEEEEcC
Q psy9936 80 QGIELHCLK-----VLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFS--AKKGKLSVMTQNPYNACICLGHR 152 (315)
Q Consensus 80 ~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~--~~~~~v~~~~~~p~~~~l~~~~~ 152 (315)
.+.....+. ....|.++...+++.+ .+|+.++-+..+|..+++...... .....|.++...++|.+.+ |+.
T Consensus 391 ~~~~~~~~~~~~~~~~~~v~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~ 468 (781)
T 3v9f_A 391 GKRVAIYNKENRELLSNSVLCSLKDSEGNL-WFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWI-GTH 468 (781)
T ss_dssp TEEEEECC-----CCCSBEEEEEECTTSCE-EEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEE-EET
T ss_pred CCCeEEEccCCCCCCCcceEEEEECCCCCE-EEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEE-EEC
Confidence 654433221 1256888888877764 456666679999987765432211 1345689999888887554 444
Q ss_pred CCeEEEEcCCCCcceeEeecc-----cccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEecc-----CCCceeE
Q psy9936 153 NGTVTMWSPTVQKPLASLLCH-----KAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRT-----RTPINNL 222 (315)
Q Consensus 153 d~~i~i~d~~~~~~~~~~~~~-----~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-----~~~v~~~ 222 (315)
+.|..||..+++........ ...|.++...++|.+.+. +.++-+..||..+. .+..+.. ...|.++
T Consensus 469 -~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig-t~~~Gl~~~~~~~~--~~~~~~~~~~l~~~~i~~i 544 (781)
T 3v9f_A 469 -AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIG-TFGGGVGIYTPDMQ--LVRKFNQYEGFCSNTINQI 544 (781)
T ss_dssp -TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEE-ESSSCEEEECTTCC--EEEEECTTTTCSCSCEEEE
T ss_pred -CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEE-EcCCCEEEEeCCCC--eEEEccCCCCCCCCeeEEE
Confidence 56889998876543322211 357899999999986554 44334777887664 2333322 1247889
Q ss_pred EEccCCe-EEEEcCCEEEecCC
Q psy9936 223 AFSQRGL-LATSRGNIVEFLKP 243 (315)
Q Consensus 223 ~~s~~g~-~~~~~~~~i~~~~~ 243 (315)
..+++|. ++++.+|.+..+++
T Consensus 545 ~~d~~g~lWi~T~~Glv~~~d~ 566 (781)
T 3v9f_A 545 YRSSKGQMWLATGEGLVCFPSA 566 (781)
T ss_dssp EECTTSCEEEEETTEEEEESCT
T ss_pred EECCCCCEEEEECCCceEEECC
Confidence 9989885 55666554366665
No 282
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.69 E-value=1.4e-06 Score=80.04 Aligned_cols=219 Identities=10% Similarity=0.037 Sum_probs=127.9
Q ss_pred EEEEcCCCCEEEEEcC-CCeEEEEEccCceEEEEec-CCC-ceeEEEEeecCcEEEEEe--C-----CeEEEEeCCCCEE
Q psy9936 15 RMNYTKNGRHLLLGGK-RGHVAAFDWVRKTLACEMN-VME-EVYDIKWLHLETMFAVAQ--K-----DWVYIYDNQGIEL 84 (315)
Q Consensus 15 ~~~~s~~~~~l~~~~~-dg~i~v~~~~~~~~~~~~~-~~~-~v~~~~~~~~~~~l~~~~--~-----~~i~i~~~~~~~~ 84 (315)
++++.++++.+++|+. +..+.+||..+++....-. ... .-.+++..+++++++.|+ + ..+.+||......
T Consensus 247 ~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W 326 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW 326 (656)
T ss_dssp EEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEE
T ss_pred cccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcc
Confidence 4677789999999884 4589999998887654432 112 223456667898888876 2 4799999977665
Q ss_pred EEeecC------CceEEEEEcCCCceEEEEcCC---------CeEEEEEccCCeEEEEeccCC---------CCeEEEEE
Q psy9936 85 HCLKVL------NKVTRMEFLPYHFLLATASEE---------GYLSWLDTSIGKIVSDFSAKK---------GKLSVMTQ 140 (315)
Q Consensus 85 ~~~~~~------~~v~~~~~~~~~~~l~~~~~d---------~~i~~~d~~~~~~~~~~~~~~---------~~v~~~~~ 140 (315)
..+... ..-....+..++..++.++.+ ..+..||..+.........+. ..-.++.|
T Consensus 327 ~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~ 406 (656)
T 1k3i_A 327 TSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMY 406 (656)
T ss_dssp EEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEE
T ss_pred eeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEec
Confidence 554211 000011122445555555444 356788887765433222111 12244455
Q ss_pred cC-CCCEEEEEcCCC-----------eEEEEcCCCCcceeEe--eccccc-EEEEEECCCCCEEEEeeCC----------
Q psy9936 141 NP-YNACICLGHRNG-----------TVTMWSPTVQKPLASL--LCHKAG-IQSVAVNHTGTYMATSAGD---------- 195 (315)
Q Consensus 141 ~p-~~~~l~~~~~d~-----------~i~i~d~~~~~~~~~~--~~~~~~-i~~~~~sp~g~~l~~~~~d---------- 195 (315)
.. ++++++.|+.++ .+.+||..+....... ..+... -.++...|+|++++.|+.+
T Consensus 407 ~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~ 486 (656)
T 1k3i_A 407 DAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTP 486 (656)
T ss_dssp ETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSB
T ss_pred cCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCc
Confidence 43 677888887542 6888998876543322 112222 2345667899999999854
Q ss_pred -CcEEEEEccCCCCCeeEec---cCCC-ceeEEEccCCeEEEEcC
Q psy9936 196 -SQLRIWDVRNLEGPLNTFR---TRTP-INNLAFSQRGLLATSRG 235 (315)
Q Consensus 196 -~~i~iwd~~~~~~~~~~~~---~~~~-v~~~~~s~~g~~~~~~~ 235 (315)
..+.+||..+. + ...+. .... .....+.|+|.+++.++
T Consensus 487 ~~~v~~ydp~t~-~-W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG 529 (656)
T 1k3i_A 487 VFTPEIYVPEQD-T-FYKQNPNSIVRVYHSISLLLPDGRVFNGGG 529 (656)
T ss_dssp CCCCEEEEGGGT-E-EEECCCCSSCCCTTEEEEECTTSCEEEEEC
T ss_pred ccceEEEcCCCC-c-eeecCCCCCccccccHhhcCCCcEEEecCC
Confidence 46899998774 2 22221 1111 23455678996555443
No 283
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.67 E-value=1.3e-06 Score=81.64 Aligned_cols=153 Identities=12% Similarity=0.027 Sum_probs=94.3
Q ss_pred ceeEEEEe-ecCcEEEEEeC--C----eEEEEeCCCC-EEEEeecCCceEEEEEcCCCceEEEEcCC-----CeEEEEEc
Q psy9936 53 EVYDIKWL-HLETMFAVAQK--D----WVYIYDNQGI-ELHCLKVLNKVTRMEFLPYHFLLATASEE-----GYLSWLDT 119 (315)
Q Consensus 53 ~v~~~~~~-~~~~~l~~~~~--~----~i~i~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~ 119 (315)
.+...+|| |||++|+.+.+ | .|+++|+.+. +............+.|+|||+.|+....+ ..|+++++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~l 254 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVM 254 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEET
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEEC
Confidence 57788999 99999887642 2 4999999765 42110001123468899999877777654 25888888
Q ss_pred cCCeE--EEEec-cCCCCeEEEEEcCCCCEEEEEc---CCCeEEEEcCCCCc-ce--eEee-cccccEEEEEECCCCCEE
Q psy9936 120 SIGKI--VSDFS-AKKGKLSVMTQNPYNACICLGH---RNGTVTMWSPTVQK-PL--ASLL-CHKAGIQSVAVNHTGTYM 189 (315)
Q Consensus 120 ~~~~~--~~~~~-~~~~~v~~~~~~p~~~~l~~~~---~d~~i~i~d~~~~~-~~--~~~~-~~~~~i~~~~~sp~g~~l 189 (315)
.++.. ...+. ........+.|+|||++|+... ....|.++|+.++. .. ..+. .......++.|+..+.++
T Consensus 255 gt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~ 334 (751)
T 2xe4_A 255 GKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLV 334 (751)
T ss_dssp TSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEE
T ss_pred CCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEE
Confidence 76631 22222 2233466789999999887654 34578899998752 22 3332 334455666665444444
Q ss_pred EEeeCC--C--cEEEEEccC
Q psy9936 190 ATSAGD--S--QLRIWDVRN 205 (315)
Q Consensus 190 ~~~~~d--~--~i~iwd~~~ 205 (315)
+.+..+ + .|..+++.+
T Consensus 335 ~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 335 ILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp EEECTTTCTTCEEEEEETTS
T ss_pred EEeCCCCCCCcEEEEEcCCC
Confidence 444443 2 466667654
No 284
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.66 E-value=2.9e-05 Score=70.17 Aligned_cols=221 Identities=10% Similarity=0.095 Sum_probs=134.1
Q ss_pred CCEEEEEcCCCeEEEEEccCceEEEEecCCC-----cee-EEEEeec---Cc-EEEEEe-------CCeEEEEeCC-CCE
Q psy9936 22 GRHLLLGGKRGHVAAFDWVRKTLACEMNVME-----EVY-DIKWLHL---ET-MFAVAQ-------KDWVYIYDNQ-GIE 83 (315)
Q Consensus 22 ~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~-----~v~-~~~~~~~---~~-~l~~~~-------~~~i~i~~~~-~~~ 83 (315)
+..+++++.++.|.-+|..+|+.+....... .+. ......+ ++ .++++. ++.|+-+|.. ++.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 4567778889999999999999887765221 111 1112222 22 444443 6789999984 555
Q ss_pred EEEeecCC-c-----------------------------------------eEEEEEcCCCceEEEEcC-----------
Q psy9936 84 LHCLKVLN-K-----------------------------------------VTRMEFLPYHFLLATASE----------- 110 (315)
Q Consensus 84 ~~~~~~~~-~-----------------------------------------v~~~~~~~~~~~l~~~~~----------- 110 (315)
+....... . -..+++.|...+++.+..
T Consensus 197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~ 276 (582)
T 1flg_A 197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWART 276 (582)
T ss_dssp EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGS
T ss_pred EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccc
Confidence 44332210 0 013456677667776653
Q ss_pred ---------C----CeEEEEEccCCeEEEEecc--CCC-------CeEEEEEc-CCCC---EEEEEcCCCeEEEEcCCCC
Q psy9936 111 ---------E----GYLSWLDTSIGKIVSDFSA--KKG-------KLSVMTQN-PYNA---CICLGHRNGTVTMWSPTVQ 164 (315)
Q Consensus 111 ---------d----~~i~~~d~~~~~~~~~~~~--~~~-------~v~~~~~~-p~~~---~l~~~~~d~~i~i~d~~~~ 164 (315)
| +.|..+|..+|+.+-.++. |.. ...-+... .+|+ .++.++.+|.+.++|.+++
T Consensus 277 ~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG 356 (582)
T 1flg_A 277 AKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNG 356 (582)
T ss_dssp CTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTC
T ss_pred cCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCC
Confidence 2 5899999999998877653 321 11112222 4674 7888999999999999999
Q ss_pred cceeEeeccc-------------ccE--------------------------------EEEEECCCCCEEEEee------
Q psy9936 165 KPLASLLCHK-------------AGI--------------------------------QSVAVNHTGTYMATSA------ 193 (315)
Q Consensus 165 ~~~~~~~~~~-------------~~i--------------------------------~~~~~sp~g~~l~~~~------ 193 (315)
+.+..+.... .++ ..++++|+..++++..
T Consensus 357 ~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~ 436 (582)
T 1flg_A 357 KLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKED 436 (582)
T ss_dssp CEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEE
T ss_pred CEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhccee
Confidence 8876654321 000 1345666654444432
Q ss_pred ---------------------------CCCcEEEEEccCCCCCeeEeccCCCcee-EEEccCCe-EEEEcCCEEEecCC
Q psy9936 194 ---------------------------GDSQLRIWDVRNLEGPLNTFRTRTPINN-LAFSQRGL-LATSRGNIVEFLKP 243 (315)
Q Consensus 194 ---------------------------~d~~i~iwd~~~~~~~~~~~~~~~~v~~-~~~s~~g~-~~~~~~~~i~~~~~ 243 (315)
.+|.|.-||+.++ +.+.......++.. .....+|+ ++++.|+.++.++.
T Consensus 437 ~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG-~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~ 514 (582)
T 1flg_A 437 YWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSG-KVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDA 514 (582)
T ss_dssp EEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTC-CEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEET
T ss_pred eecccccccCCCceeccceeecCCCCCCcceEEEEECCCC-CEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEEC
Confidence 2578999999998 77766665544332 22223554 55667888886654
No 285
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.66 E-value=0.00012 Score=61.21 Aligned_cols=221 Identities=10% Similarity=0.093 Sum_probs=126.5
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEE--ec---CCCceeEEEEeecCcEEEEEeCCeEEEEeCCCCEE
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACE--MN---VMEEVYDIKWLHLETMFAVAQKDWVYIYDNQGIEL 84 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~--~~---~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~~~~~~ 84 (315)
...+.++.|.+++..++++ ..|.| +...+.++.=.. .. ....+.++.|.+ +..++++..+.|+.-.-.+...
T Consensus 35 ~~~~~~v~~~~~~~~~~~G-~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~~g~~g~i~~S~DgG~tW 111 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLVG-VNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWIVGEPPIMLHTTDGGQSW 111 (327)
T ss_dssp SSCEEEEEESSSSCEEEEE-TTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEEEEETTEEEEESSTTSSC
T ss_pred CCcEEEEEECCCCcEEEEc-CCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEEEECCCeEEEECCCCCCc
Confidence 5678999998888777755 46655 333344432111 11 134688898876 6666777777665532223333
Q ss_pred EEee----cCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEE-EeccCCCCeEEEEEcCCCCEEEEEcCCCeEEEE
Q psy9936 85 HCLK----VLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVS-DFSAKKGKLSVMTQNPYNACICLGHRNGTVTMW 159 (315)
Q Consensus 85 ~~~~----~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~-~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~ 159 (315)
.... ....+..+.+.+++..++++. ++.|.. ..+.|+.-. ........+..+.+.|++.+++++...+..+-.
T Consensus 112 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~ 189 (327)
T 2xbg_A 112 SQIPLDPKLPGSPRLIKALGNGSAEMITN-VGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTW 189 (327)
T ss_dssp EECCCCTTCSSCEEEEEEEETTEEEEEET-TCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEE
T ss_pred eECccccCCCCCeEEEEEECCCCEEEEeC-CccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEe
Confidence 3322 124567788777776666554 554422 222233222 223345578899999999888777655545555
Q ss_pred cC--CCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEec-----cCCCceeEEEccCCe-EE
Q psy9936 160 SP--TVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFR-----TRTPINNLAFSQRGL-LA 231 (315)
Q Consensus 160 d~--~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~-----~~~~v~~~~~s~~g~-~~ 231 (315)
|- .+.+.+. ......+..+.+.|++.+++ ++.+|.+++.+...+ .....+. ....+..+.+.+++. ++
T Consensus 190 d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G-~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~ 265 (327)
T 2xbg_A 190 EPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNS-ENWGELLSPLRRNSVGFLDLAYRTPNEVWL 265 (327)
T ss_dssp CTTCSSCEEEE--CCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEE-EEECCCBCTTSSCCSCEEEEEESSSSCEEE
T ss_pred CCCCCceeECC--CCCCCccceeEECCCCCEEE-EeCCceEEEecCCCC-CeeEeccCCcccCCcceEEEEecCCCEEEE
Confidence 53 2233321 23456788999999987664 456777777642212 2111111 122478888988774 55
Q ss_pred EEcCCEEE
Q psy9936 232 TSRGNIVE 239 (315)
Q Consensus 232 ~~~~~~i~ 239 (315)
++.++.+.
T Consensus 266 ~g~~g~i~ 273 (327)
T 2xbg_A 266 AGGAGALL 273 (327)
T ss_dssp EESTTCEE
T ss_pred EeCCCeEE
Confidence 55666554
No 286
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.63 E-value=0.00014 Score=60.72 Aligned_cols=222 Identities=10% Similarity=0.081 Sum_probs=129.5
Q ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec----CCCceeEEEEeecCcEEEEEeCCeEEEEeCCCCEEEE
Q psy9936 11 FGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN----VMEEVYDIKWLHLETMFAVAQKDWVYIYDNQGIELHC 86 (315)
Q Consensus 11 ~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~~~~~~~~ 86 (315)
..+.++.|++ +..+++ +..+.|.. ..+.++.-.... ....+..+.+.+++.+++++.++.|+.-.-.+.....
T Consensus 80 ~~~~~i~~~~-~~~~~~-g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~S~DgG~tW~~ 156 (327)
T 2xbg_A 80 YRFNSVSFQG-NEGWIV-GEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRTKDSGKNWQA 156 (327)
T ss_dssp CEEEEEEEET-TEEEEE-EETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEEESSTTSSEEE
T ss_pred ccEEEEEecC-CeEEEE-ECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCCccEEEEcCCCCCCEE
Confidence 3678899986 444444 45564443 334343222221 2345778888888888887777765433222333333
Q ss_pred ee--cCCceEEEEEcCCCceEEEEcCCCeEEE-EEc--cCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCeEEEEcC
Q psy9936 87 LK--VLNKVTRMEFLPYHFLLATASEEGYLSW-LDT--SIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNGTVTMWSP 161 (315)
Q Consensus 87 ~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~~-~d~--~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~ 161 (315)
.. ....+..+.+.|++.+++++.. |.+.. .|- .+-+.+. ......+..+.+.|++.+++. +.+|.+.+.+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~g~~-G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~ 232 (327)
T 2xbg_A 157 LVQEAIGVMRNLNRSPSGEYVAVSSR-GSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDP 232 (327)
T ss_dssp EECSCCCCEEEEEECTTSCEEEEETT-SSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEEE-ETTTEEEEEET
T ss_pred eecCCCcceEEEEEcCCCcEEEEECC-CcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEEEE-eCCceEEEecC
Confidence 32 3357889999998887776654 44433 332 2223332 234456888999999876654 45788777643
Q ss_pred CCCcceeEee-c---ccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEecc----CCCceeEEEccCCe-EEE
Q psy9936 162 TVQKPLASLL-C---HKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRT----RTPINNLAFSQRGL-LAT 232 (315)
Q Consensus 162 ~~~~~~~~~~-~---~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~----~~~v~~~~~s~~g~-~~~ 232 (315)
+.++.-..+. . +...+..+.+.|++.+++++. ++.+ ++....+ ..-..+.. +..+.++.|.+++. +++
T Consensus 233 D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG-~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~ 309 (327)
T 2xbg_A 233 DNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGG-QTWQQDVDVKKVPSNFYKILFFSPDQGFIL 309 (327)
T ss_dssp TEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTT-SSCEECGGGTTSSSCCCEEEEEETTEEEEE
T ss_pred CCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCC-cccEEcCccCCCCCCeEEEEEECCCceEEE
Confidence 3232211121 1 223588999999888776654 6666 4444444 44444432 34578899987775 566
Q ss_pred EcCCEEEecC
Q psy9936 233 SRGNIVEFLK 242 (315)
Q Consensus 233 ~~~~~i~~~~ 242 (315)
+.+|.|..++
T Consensus 310 G~~G~i~~~~ 319 (327)
T 2xbg_A 310 GQKGILLRYV 319 (327)
T ss_dssp CSTTEEEEEC
T ss_pred cCCceEEEEc
Confidence 6678877655
No 287
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.61 E-value=4.3e-05 Score=64.56 Aligned_cols=217 Identities=14% Similarity=0.150 Sum_probs=120.3
Q ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEE--EEec----CCCceeEEEEeec----CcEEEEEe-C-----CeE
Q psy9936 11 FGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLA--CEMN----VMEEVYDIKWLHL----ETMFAVAQ-K-----DWV 74 (315)
Q Consensus 11 ~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~--~~~~----~~~~v~~~~~~~~----~~~l~~~~-~-----~~i 74 (315)
..+..++|.|+|+++++ ...|.|++++ +++.. ..+. .......++|+|+ +.++++.. . +.|
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 45789999999986665 4568999998 34422 2221 2346889999998 44444433 2 678
Q ss_pred EEEeCCCCEE----EE---eec----CCceEEEEEcCCCceEEEEcC-------------CCeEEEEEccCC--------
Q psy9936 75 YIYDNQGIEL----HC---LKV----LNKVTRMEFLPYHFLLATASE-------------EGYLSWLDTSIG-------- 122 (315)
Q Consensus 75 ~i~~~~~~~~----~~---~~~----~~~v~~~~~~~~~~~l~~~~~-------------d~~i~~~d~~~~-------- 122 (315)
..++..+..+ .. +.. ......++|.|+|.++++.+. .|.|.-++....
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~ 187 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFL 187 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTT
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCccc
Confidence 8887754211 11 221 123468999999976655432 245666665420
Q ss_pred ----eEEEEe-ccCCCCeEEEEEcC-CCCEEEEEcCCCe--------EEEEcCCC----------------CcceeEeec
Q psy9936 123 ----KIVSDF-SAKKGKLSVMTQNP-YNACICLGHRNGT--------VTMWSPTV----------------QKPLASLLC 172 (315)
Q Consensus 123 ----~~~~~~-~~~~~~v~~~~~~p-~~~~l~~~~~d~~--------i~i~d~~~----------------~~~~~~~~~ 172 (315)
.....+ .++. ....++|+| +|.++++-..... |.+...-. ..++..+.
T Consensus 188 ~~~~~~~~i~a~G~r-np~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~- 265 (352)
T 2ism_A 188 GRRGARPEVYSLGHR-NPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWP- 265 (352)
T ss_dssp TCTTSCTTEEEECCS-EECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT-
T ss_pred CCCCCCccEEEEcCC-CcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecC-
Confidence 000111 1222 256789999 6665554332222 44432211 01233332
Q ss_pred ccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCC-----eeEe-ccCCCceeEEEccCCe-EEEE
Q psy9936 173 HKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGP-----LNTF-RTRTPINNLAFSQRGL-LATS 233 (315)
Q Consensus 173 ~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~-----~~~~-~~~~~v~~~~~s~~g~-~~~~ 233 (315)
+......++| .+|.++++.-..+.|...++...... ...+ .....+..+++.|||. +++.
T Consensus 266 ~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~ 332 (352)
T 2ism_A 266 QGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTT 332 (352)
T ss_dssp TCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEE
T ss_pred CCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEE
Confidence 2334567888 56776666656677888877654111 1122 2223588999999994 4544
No 288
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.58 E-value=3.9e-05 Score=63.18 Aligned_cols=201 Identities=10% Similarity=0.080 Sum_probs=127.9
Q ss_pred EEEeeC-CCcEEEEEEcCCCCEEEEEc-CCCeEEEEEccCceEEEE-ecCC-------CceeEEEE---eecCcEEEEEe
Q psy9936 4 QFDLDL-QFGIYRMNYTKNGRHLLLGG-KRGHVAAFDWVRKTLACE-MNVM-------EEVYDIKW---LHLETMFAVAQ 70 (315)
Q Consensus 4 ~~~~~~-~~~v~~~~~s~~~~~l~~~~-~dg~i~v~~~~~~~~~~~-~~~~-------~~v~~~~~---~~~~~~l~~~~ 70 (315)
.+++.. ..-..+++|++....+..++ ..++|..|+...+..... +... ..+..+.| .|+++++++..
T Consensus 5 ~i~~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~ 84 (334)
T 2p9w_A 5 QIDVKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMK 84 (334)
T ss_dssp EEEECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEE
T ss_pred eEEecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEc
Confidence 345555 55567889988555555554 789999999876644333 2221 13578999 58888888644
Q ss_pred --------------CCeEEEEeCC----CCEEEEeec--------------CCceEEEEEcCCCceEEEEcCC-CeEEEE
Q psy9936 71 --------------KDWVYIYDNQ----GIELHCLKV--------------LNKVTRMEFLPYHFLLATASEE-GYLSWL 117 (315)
Q Consensus 71 --------------~~~i~i~~~~----~~~~~~~~~--------------~~~v~~~~~~~~~~~l~~~~~d-~~i~~~ 117 (315)
+..|..||+. ++.+....- ......++..++|+..++++.. +.|..+
T Consensus 85 ~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV 164 (334)
T 2p9w_A 85 NAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARV 164 (334)
T ss_dssp ETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEE
T ss_pred ccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEE
Confidence 4679999987 544443321 1247899999999999988888 888888
Q ss_pred EccCCeEEEEecc------CCCCeEEEEEcCCCCEEEEEcCCCeEEEEcCCCCcc--eeEee--cc---cccEEEE-EEC
Q psy9936 118 DTSIGKIVSDFSA------KKGKLSVMTQNPYNACICLGHRNGTVTMWSPTVQKP--LASLL--CH---KAGIQSV-AVN 183 (315)
Q Consensus 118 d~~~~~~~~~~~~------~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~--~~~~~--~~---~~~i~~~-~~s 183 (315)
+.. |+.+..+.. .....+.|+++|+|+.|++....+.+..+|+++... +. .. +. -.....+ ..-
T Consensus 165 ~pd-G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~-~~~~G~~~~~~~~dgilp~~ 242 (334)
T 2p9w_A 165 SAD-GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEP-VKINGDFGTLSGTEKIVTVP 242 (334)
T ss_dssp CTT-SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEE-CEESSCCCCCTTEEEEEEEE
T ss_pred eCC-CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeec-ccccCCcccccCcccccccc
Confidence 866 333332211 112367899999999888887799999999884322 11 11 21 1123343 333
Q ss_pred CCCCE-EEEeeCCCcEEEEEccCC
Q psy9936 184 HTGTY-MATSAGDSQLRIWDVRNL 206 (315)
Q Consensus 184 p~g~~-l~~~~~d~~i~iwd~~~~ 206 (315)
.+|+. |++.+..+.+.+.+....
T Consensus 243 ~~G~vllV~~~~~~~~~l~S~DgW 266 (334)
T 2p9w_A 243 VGNESVLVGARAPYAISFRSWDNW 266 (334)
T ss_dssp ETTEEEEEEEETTEEEEEECSSTT
T ss_pred cCCEEEEEEcCCCCEEEEECCCCc
Confidence 46776 455555666656555443
No 289
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.57 E-value=0.00016 Score=67.37 Aligned_cols=207 Identities=10% Similarity=-0.017 Sum_probs=129.4
Q ss_pred EEEEEcCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEe--CCeEEEEeCCCC-----EEEEee-cCCceEE
Q psy9936 24 HLLLGGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQ--KDWVYIYDNQGI-----ELHCLK-VLNKVTR 95 (315)
Q Consensus 24 ~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~~~~~~-----~~~~~~-~~~~v~~ 95 (315)
+|+.+ ....|+..++..............+..++|.+.+..|..+. .+.|+.+++.+. ....+. .......
T Consensus 397 ~Ll~a-n~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~G 475 (791)
T 3m0c_C 397 YLFFT-NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 475 (791)
T ss_dssp EEEEE-CBSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred ccccc-cccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcce
Confidence 44444 34568888887766655555566788999998655554443 578999998653 122232 3356778
Q ss_pred EEEcCCCc-eEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcC--CCeEEEEcCCCCcceeEeec
Q psy9936 96 MEFLPYHF-LLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHR--NGTVTMWSPTVQKPLASLLC 172 (315)
Q Consensus 96 ~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~ 172 (315)
|++.+.+. ++++-...+.|.+.++........+.........|+++|.+..|+.... .+.|...++........+..
T Consensus 476 LAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~ 555 (791)
T 3m0c_C 476 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE 555 (791)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS
T ss_pred eeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeC
Confidence 99998764 5555566789999998754433333334456889999997666655542 36899999874433223333
Q ss_pred ccccEEEEEECCCCCEEEEee-CCCcEEEEEccCCCCCeeEeccCC---CceeEEEccCCeEEE
Q psy9936 173 HKAGIQSVAVNHTGTYMATSA-GDSQLRIWDVRNLEGPLNTFRTRT---PINNLAFSQRGLLAT 232 (315)
Q Consensus 173 ~~~~i~~~~~sp~g~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~---~v~~~~~s~~g~~~~ 232 (315)
.-...+.|++++.+..|+.+. ..+.|..+++... .....+.... ....|++..+.+|.+
T Consensus 556 ~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~-~~~~v~~~~~~l~~P~glav~~~~lYwt 618 (791)
T 3m0c_C 556 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-NRKTILEDEKRLAHPFSLAVFEDKVFWT 618 (791)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEEECTTTTSSEEEEEEETTEEEEE
T ss_pred CCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCC-ceEEEecCCCccCCCCEEEEeCCEEEEE
Confidence 335788999998777666654 4567999998764 3333333221 245566654434444
No 290
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.54 E-value=0.00053 Score=64.00 Aligned_cols=202 Identities=9% Similarity=-0.065 Sum_probs=125.8
Q ss_pred CCcEEEEEEcCCCCE-EEEEcCCCeEEEEEccCc----eEEEEec-CCCceeEEEEeecCcEEEEEe--CCeEEEEeCCC
Q psy9936 10 QFGIYRMNYTKNGRH-LLLGGKRGHVAAFDWVRK----TLACEMN-VMEEVYDIKWLHLETMFAVAQ--KDWVYIYDNQG 81 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~-l~~~~~dg~i~v~~~~~~----~~~~~~~-~~~~v~~~~~~~~~~~l~~~~--~~~i~i~~~~~ 81 (315)
...+..++|++.... +++-...+.|+.+++... .....+. .......|++.+.+..|..+. .+.|.+.++++
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG 502 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 502 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCC
Confidence 345678999885554 445555678888888653 2223333 334567889888765555554 67999999987
Q ss_pred CEEEEee--cCCceEEEEEcCCCceEEEEcC--CCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEE-cCCCeE
Q psy9936 82 IELHCLK--VLNKVTRMEFLPYHFLLATASE--EGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLG-HRNGTV 156 (315)
Q Consensus 82 ~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~-~~d~~i 156 (315)
.....+. .......|++.|.+..|+.+.. .+.|...++........+...-.....|++++.+..|+.+ ...+.|
T Consensus 503 ~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I 582 (791)
T 3m0c_C 503 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 582 (791)
T ss_dssp SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcE
Confidence 6655543 3366899999998655555542 3689999987444333333334568999999877666655 456789
Q ss_pred EEEcCCCCcceeEeecc--cccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEe
Q psy9936 157 TMWSPTVQKPLASLLCH--KAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTF 213 (315)
Q Consensus 157 ~i~d~~~~~~~~~~~~~--~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~ 213 (315)
..+++........+... -.....|++.. +.++++-...+.|...|..++ ..+..+
T Consensus 583 ~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~tG-~~~~~l 639 (791)
T 3m0c_C 583 SSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTG-SDVNLL 639 (791)
T ss_dssp EEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTC-CCCEEE
T ss_pred EEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeCCCC-cceEEe
Confidence 99998754333333221 22345666633 334444445677888887776 444444
No 291
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.43 E-value=0.00042 Score=56.68 Aligned_cols=222 Identities=10% Similarity=0.114 Sum_probs=145.3
Q ss_pred EEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEeCCeEEEEeCCC--CEEEEeecC--
Q psy9936 15 RMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQKDWVYIYDNQG--IELHCLKVL-- 90 (315)
Q Consensus 15 ~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~~~--~~~~~~~~~-- 90 (315)
+.-.+|..+.||.-. ..++.|+|+++.+.+..+...+.|.-=.|-. .+.|+.-.+..|+-|++++ .+...+..+
T Consensus 71 sAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis-~~~L~lVT~taVyHWs~~~~s~P~kvFdR~~~ 148 (365)
T 2xzh_A 71 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWIS-LNTVALVTDNAVYHWSMEGESQPVKMFDRHSS 148 (365)
T ss_dssp EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECS-SSEEEEEESSEEEEEESSTTCCCEEEEECCGG
T ss_pred eeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecC-CCeEEEEcCCcEEEEcccCCCCCceeeecchh
Confidence 344688888888765 6789999999999999888888887777764 4567777789999999954 444444432
Q ss_pred ---CceEEEEEcCCCceEEEEcC-------CCeEEEEEccCCeEEEEeccCCCCeEEEEEcCC---CCEEEEEcC---CC
Q psy9936 91 ---NKVTRMEFLPYHFLLATASE-------EGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPY---NACICLGHR---NG 154 (315)
Q Consensus 91 ---~~v~~~~~~~~~~~l~~~~~-------d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~---~~~l~~~~~---d~ 154 (315)
..|.....+++.++++..+- .|.+.+|..+. +..+.+++|......+.+.-+ ..+|+.+.. .+
T Consensus 149 L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~ 227 (365)
T 2xzh_A 149 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGG 227 (365)
T ss_dssp GTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT-TEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEE
T ss_pred cccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc-cccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCc
Confidence 55677777888887765542 36788999874 455667787654433332211 113443332 25
Q ss_pred eEEEEcCCCC---cce-----eE-e-e--cccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-Ccee
Q psy9936 155 TVTMWSPTVQ---KPL-----AS-L-L--CHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-PINN 221 (315)
Q Consensus 155 ~i~i~d~~~~---~~~-----~~-~-~--~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~ 221 (315)
.+.+.++... .+. .. + . ....-.-++..|+....++.-+.-|.+++||+.++ .++..-+... +|..
T Consensus 228 kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTg-t~i~~nrIS~d~iF~ 306 (365)
T 2xzh_A 228 KLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETG-TCIYMNRISGETIFV 306 (365)
T ss_dssp EEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTC-CEEEEEECCSSCEEE
T ss_pred EEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccC-cEEEEeccCCCceEE
Confidence 8889887432 111 01 1 1 11233456778887778888889999999999999 8887766544 4543
Q ss_pred EEEc-c-CCeEEEEcCCEEEe
Q psy9936 222 LAFS-Q-RGLLATSRGNIVEF 240 (315)
Q Consensus 222 ~~~s-~-~g~~~~~~~~~i~~ 240 (315)
-+-+ . .|.+.+...|.+-.
T Consensus 307 ta~~~~~~Gi~~Vnr~GqVl~ 327 (365)
T 2xzh_A 307 TAPHEATAGIIGVNRKGQVLS 327 (365)
T ss_dssp EEEEGGGTEEEEEETTCEEEE
T ss_pred ecccCCCCcEEEEcCCCEEEE
Confidence 3332 2 34566666776543
No 292
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.43 E-value=0.00073 Score=61.53 Aligned_cols=192 Identities=6% Similarity=-0.058 Sum_probs=125.6
Q ss_pred cEEEEEEcCCCCEEE-EEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEe--CCeEEEEeCCCCEEEEe
Q psy9936 12 GIYRMNYTKNGRHLL-LGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQ--KDWVYIYDNQGIELHCL 87 (315)
Q Consensus 12 ~v~~~~~s~~~~~l~-~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~--~~~i~i~~~~~~~~~~~ 87 (315)
.+..++|++.+..|. +-..++.|+.++++.......+. .......+++.+.+..|..+. .+.|.+.++++.....+
T Consensus 38 ~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l 117 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVL 117 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEE
T ss_pred ceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEE
Confidence 567999998666554 55567889999987654444443 224577888887655444443 57899999976543333
Q ss_pred --ecCCceEEEEEcCCCceEEEEc--CCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEE-cCCCeEEEEcCC
Q psy9936 88 --KVLNKVTRMEFLPYHFLLATAS--EEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLG-HRNGTVTMWSPT 162 (315)
Q Consensus 88 --~~~~~v~~~~~~~~~~~l~~~~--~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~-~~d~~i~i~d~~ 162 (315)
........+++.|....|+.+. ..+.|...++..... ..+...-.....+++++++..|+.+ ...+.|..+|+.
T Consensus 118 ~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~-~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~d 196 (628)
T 4a0p_A 118 VWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER-TTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNML 196 (628)
T ss_dssp ECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce-EEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCC
Confidence 3346789999999655555554 356788888864433 2322344568899999987766555 456799999997
Q ss_pred CCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCC
Q psy9936 163 VQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNL 206 (315)
Q Consensus 163 ~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~ 206 (315)
.... ..+.........+++.. +.++++-...+.|...|..++
T Consensus 197 G~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg 238 (628)
T 4a0p_A 197 GLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSG 238 (628)
T ss_dssp SCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTC
T ss_pred CCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCC
Confidence 5433 33433334556788765 444445455778888887666
No 293
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.40 E-value=0.0006 Score=57.53 Aligned_cols=218 Identities=12% Similarity=0.090 Sum_probs=124.2
Q ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEccCce-EEEEec----CCCceeEEEEeec----CcEEEEEe----C----Ce
Q psy9936 11 FGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKT-LACEMN----VMEEVYDIKWLHL----ETMFAVAQ----K----DW 73 (315)
Q Consensus 11 ~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~-~~~~~~----~~~~v~~~~~~~~----~~~l~~~~----~----~~ 73 (315)
..+..++|.|+|+++++ ..+|.|++++ .+++ .+..+. .......++++|+ +.++++-. + +.
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 46789999999985555 5568999997 3454 222221 2346889999997 55554433 2 56
Q ss_pred EEEEeCCCC------EEEE---eec--CCceEEEEEcCCCceEEEEcC-------------CCeEEEEEccCCe------
Q psy9936 74 VYIYDNQGI------ELHC---LKV--LNKVTRMEFLPYHFLLATASE-------------EGYLSWLDTSIGK------ 123 (315)
Q Consensus 74 i~i~~~~~~------~~~~---~~~--~~~v~~~~~~~~~~~l~~~~~-------------d~~i~~~d~~~~~------ 123 (315)
|..|+.++. .... +.. ......++|.|+|.++++.+. .|.|.-++.. ++
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d-G~~p~~np 185 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEE-GRPPADNP 185 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTT-SCCCTTSS
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCC-CCCCCCCC
Confidence 777776543 1111 221 123467999999986666432 2456666654 22
Q ss_pred ----EEEEeccCCCCeEEEEEcC-CCCEEEEEcCCC---eEEEEcCCC----------------CcceeEeecccccEEE
Q psy9936 124 ----IVSDFSAKKGKLSVMTQNP-YNACICLGHRNG---TVTMWSPTV----------------QKPLASLLCHKAGIQS 179 (315)
Q Consensus 124 ----~~~~~~~~~~~v~~~~~~p-~~~~l~~~~~d~---~i~i~d~~~----------------~~~~~~~~~~~~~i~~ 179 (315)
.+.. .++.. ...++|+| +|+++++-.... .|.+...-. ..++..+......+..
T Consensus 186 f~~~~i~a-~G~rn-p~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G 263 (354)
T 3a9g_A 186 FPNSPIWS-YGHRN-PQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSG 263 (354)
T ss_dssp STTCCEEE-ECCSC-CCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEE
T ss_pred CCCCcEEE-EccCC-cceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcc
Confidence 1111 22332 46799999 676555432221 244332111 0133333112345678
Q ss_pred EEEC-------CCCCEEEEeeCCCcEEEEEccCCCCCe--eEecc--CCCceeEEEccCCe-EEEE
Q psy9936 180 VAVN-------HTGTYMATSAGDSQLRIWDVRNLEGPL--NTFRT--RTPINNLAFSQRGL-LATS 233 (315)
Q Consensus 180 ~~~s-------p~g~~l~~~~~d~~i~iwd~~~~~~~~--~~~~~--~~~v~~~~~s~~g~-~~~~ 233 (315)
++|. .+|.++++.-..+.|...++....... ..+.. ...+.++++.|||. +++.
T Consensus 264 ~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~ 329 (354)
T 3a9g_A 264 ASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILIST 329 (354)
T ss_dssp EEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEE
T ss_pred eEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEE
Confidence 8884 567777766667788888887531222 22322 23588999999994 5554
No 294
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.40 E-value=3.3e-05 Score=67.15 Aligned_cols=151 Identities=9% Similarity=0.026 Sum_probs=97.6
Q ss_pred ceeEEEEee-c-CcEEEEEeCCeEEEEeCCCCEEEEee-cCCceEEEEEcCCCceEEEEcC-CC----eEEEEEccCCeE
Q psy9936 53 EVYDIKWLH-L-ETMFAVAQKDWVYIYDNQGIELHCLK-VLNKVTRMEFLPYHFLLATASE-EG----YLSWLDTSIGKI 124 (315)
Q Consensus 53 ~v~~~~~~~-~-~~~l~~~~~~~i~i~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~-d~----~i~~~d~~~~~~ 124 (315)
....++++| + +.++++...+.|+.+|+++..+..+. .......++|+++++.|+++.. ++ .+.+++.. +..
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~~ 216 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SGF 216 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GTS
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cce
Confidence 356789997 3 44444444578999999877665543 3466889999999996666654 22 34445543 321
Q ss_pred E--EEeccCCCCeEEEEEcC-CCCEEEEEcCCCeEEEEcCCCCcceeEee-cccccEEEEEECCCCCEEEEe-eCCCcEE
Q psy9936 125 V--SDFSAKKGKLSVMTQNP-YNACICLGHRNGTVTMWSPTVQKPLASLL-CHKAGIQSVAVNHTGTYMATS-AGDSQLR 199 (315)
Q Consensus 125 ~--~~~~~~~~~v~~~~~~p-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~i~~~~~sp~g~~l~~~-~~d~~i~ 199 (315)
. ..+.. ......++++| +|.++++-..++.|..++..++....... +.......++|+|+|++|+.+ ...+.|.
T Consensus 217 ~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~ 295 (430)
T 3tc9_A 217 KVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYIL 295 (430)
T ss_dssp CSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEE
T ss_pred eeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEE
Confidence 1 22221 22356788999 67777676678899999998664322222 122457899999999965555 4567899
Q ss_pred EEEccC
Q psy9936 200 IWDVRN 205 (315)
Q Consensus 200 iwd~~~ 205 (315)
.++...
T Consensus 296 ~~~~d~ 301 (430)
T 3tc9_A 296 RSDYDW 301 (430)
T ss_dssp EEEEET
T ss_pred EEeCCc
Confidence 988763
No 295
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.40 E-value=3.1e-06 Score=78.13 Aligned_cols=211 Identities=10% Similarity=-0.013 Sum_probs=125.8
Q ss_pred CCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEe--CCeEEEEeCCC----CEEEE-ee-cCCceEEEEEcCC
Q psy9936 30 KRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQ--KDWVYIYDNQG----IELHC-LK-VLNKVTRMEFLPY 101 (315)
Q Consensus 30 ~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~~~~~----~~~~~-~~-~~~~v~~~~~~~~ 101 (315)
..+.|++.++.+.+....+.....+..++|.+.+..|..+. .+.|+.+++.+ ..... +. .......+++.+.
T Consensus 384 ~~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~ 463 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 463 (699)
T ss_dssp CTTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS
T ss_pred CccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee
Confidence 34578888888776655555455678899998766666654 57899998865 22111 11 1234567888865
Q ss_pred -CceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcC--CCeEEEEcCCCCcceeEe-ecccccE
Q psy9936 102 -HFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHR--NGTVTMWSPTVQKPLASL-LCHKAGI 177 (315)
Q Consensus 102 -~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~--d~~i~i~d~~~~~~~~~~-~~~~~~i 177 (315)
++++++-...+.|.++++........+.........++++|.+.+|+.+.. .+.|..+++.... ...+ ...-...
T Consensus 464 ~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~~~l~~~~l~~P 542 (699)
T 1n7d_A 464 HSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWP 542 (699)
T ss_dssp SSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-CCEESCSSCSSC
T ss_pred CCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-eeEEEeCCCCCc
Confidence 445555556788999998755443333333345678899997665555443 2678888876432 2222 2223456
Q ss_pred EEEEECCCCCEEEE-eeCCCcEEEEEccCCCCCeeEeccC---CCceeEEEccCCeEEEE-cCCEEEecC
Q psy9936 178 QSVAVNHTGTYMAT-SAGDSQLRIWDVRNLEGPLNTFRTR---TPINNLAFSQRGLLATS-RGNIVEFLK 242 (315)
Q Consensus 178 ~~~~~sp~g~~l~~-~~~d~~i~iwd~~~~~~~~~~~~~~---~~v~~~~~s~~g~~~~~-~~~~i~~~~ 242 (315)
+.|+|+|++..|+. -+..+.|..+++... .....+... .....|++..+.+|.+. ..+.|..++
T Consensus 543 nGlavd~~~~~LY~aD~~~~~I~~~d~dG~-~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d 611 (699)
T 1n7d_A 543 NGITLDLLSGRLYWVDSKLHSISSIDVNGG-NRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSAN 611 (699)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEECSSSS-CCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEE
T ss_pred cEEEEeccCCEEEEEecCCCeEEEEccCCC-ceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEE
Confidence 78999998655544 455678999998754 332222211 12456677666555444 345666544
No 296
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.37 E-value=0.00012 Score=63.68 Aligned_cols=150 Identities=9% Similarity=0.078 Sum_probs=93.9
Q ss_pred eeEEEEeec---CcEEEEEeCCeEEEEeCCCCEEEEee-cCCceEEEEEcCCCceEEEEcCC---C-eEEEEEccCCeE-
Q psy9936 54 VYDIKWLHL---ETMFAVAQKDWVYIYDNQGIELHCLK-VLNKVTRMEFLPYHFLLATASEE---G-YLSWLDTSIGKI- 124 (315)
Q Consensus 54 v~~~~~~~~---~~~l~~~~~~~i~i~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d---~-~i~~~d~~~~~~- 124 (315)
...++|.|+ +.++++-..+.|+.++..+..+..+. .......++++++|+++++.... . .+..++...+..
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~ 220 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTE 220 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCC
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeec
Confidence 568899984 55555544588999999665555543 34668999999999944443321 1 244444332211
Q ss_pred EEEeccCCCCeEEEEEcC-CCCEEEEEcCCCeEEEEcCCCCcceeEee--cccccEEEEEECCCCCEEEEe-eCCCcEEE
Q psy9936 125 VSDFSAKKGKLSVMTQNP-YNACICLGHRNGTVTMWSPTVQKPLASLL--CHKAGIQSVAVNHTGTYMATS-AGDSQLRI 200 (315)
Q Consensus 125 ~~~~~~~~~~v~~~~~~p-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~i~~~~~sp~g~~l~~~-~~d~~i~i 200 (315)
...+. .......++++| +|.++++-..++.|+.+|..++.....+. +.......++|+|+|++|+.+ ...+.|+.
T Consensus 221 ~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~ 299 (433)
T 4hw6_A 221 RLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYR 299 (433)
T ss_dssp EEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred ccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEE
Confidence 01111 123456688999 67666666677899999998776523332 112233579999999965555 45678999
Q ss_pred EEcc
Q psy9936 201 WDVR 204 (315)
Q Consensus 201 wd~~ 204 (315)
++..
T Consensus 300 ~~~d 303 (433)
T 4hw6_A 300 VDYN 303 (433)
T ss_dssp EEBC
T ss_pred EeCC
Confidence 8865
No 297
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.36 E-value=6.3e-05 Score=61.94 Aligned_cols=152 Identities=9% Similarity=0.085 Sum_probs=105.3
Q ss_pred eeEEEEeec-CcEEEEEe-CCeEEEEeCCCCEEEEeecC---------CceEEEEE---cCCCceEEEEc----------
Q psy9936 54 VYDIKWLHL-ETMFAVAQ-KDWVYIYDNQGIELHCLKVL---------NKVTRMEF---LPYHFLLATAS---------- 109 (315)
Q Consensus 54 v~~~~~~~~-~~~l~~~~-~~~i~i~~~~~~~~~~~~~~---------~~v~~~~~---~~~~~~l~~~~---------- 109 (315)
.-++.|.+. +.++++.. .+.|..|+..+.....+... ..+..+.| .|++.++++..
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 356788875 44444442 89999999975433332111 13578999 68887777543
Q ss_pred ---CCCeEEEEEcc---CCeEEEEecc-------------CCCCeEEEEEcCCCCEEEEEcCC-CeEEEEcCCCCcceeE
Q psy9936 110 ---EEGYLSWLDTS---IGKIVSDFSA-------------KKGKLSVMTQNPYNACICLGHRN-GTVTMWSPTVQKPLAS 169 (315)
Q Consensus 110 ---~d~~i~~~d~~---~~~~~~~~~~-------------~~~~v~~~~~~p~~~~l~~~~~d-~~i~i~d~~~~~~~~~ 169 (315)
.+..+..||+. +++.+..... -...+..++..++|+..++++.. +.|..++.... .+..
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~~ 173 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TVST 173 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CEEE
T ss_pred ccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEee
Confidence 25779999999 7776654431 11247899999999999988888 88888887643 3333
Q ss_pred eec------ccccEEEEEECCCCCEEEEeeCCCcEEEEEccCC
Q psy9936 170 LLC------HKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNL 206 (315)
Q Consensus 170 ~~~------~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~ 206 (315)
+.. .....+.|+++|+|..|++....+.+..+|+...
T Consensus 174 ~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 174 FAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp EEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred eeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 321 1123679999999998888877999999998854
No 298
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.32 E-value=0.0018 Score=58.95 Aligned_cols=215 Identities=7% Similarity=-0.026 Sum_probs=136.5
Q ss_pred CEEEEEcCCCeEEEEEccCceEEEEec--CCCceeEEEEeecCcEEEEEe--CCeEEEEeCCCCEEEEeec--CCceEEE
Q psy9936 23 RHLLLGGKRGHVAAFDWVRKTLACEMN--VMEEVYDIKWLHLETMFAVAQ--KDWVYIYDNQGIELHCLKV--LNKVTRM 96 (315)
Q Consensus 23 ~~l~~~~~dg~i~v~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~--~~~i~i~~~~~~~~~~~~~--~~~v~~~ 96 (315)
.+|+.+ ..+.|+..++++......+. ....+..++|.+.+..|..+. ++.|+.+++++.....+-. ...+..+
T Consensus 7 ~~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~Gl 85 (628)
T 4a0p_A 7 AFLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGM 85 (628)
T ss_dssp CEEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEE
T ss_pred cEEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceE
Confidence 355554 45679999998765444433 334688999999765555554 6899999987654433322 2457789
Q ss_pred EEcCCCc-eEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEc--CCCeEEEEcCCCCcceeEeecc
Q psy9936 97 EFLPYHF-LLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGH--RNGTVTMWSPTVQKPLASLLCH 173 (315)
Q Consensus 97 ~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~ 173 (315)
++.+.+. ++++-...+.|.+.++........+...-.....++++|....|+... ..+.|...++.... ...+-..
T Consensus 86 AvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~-~~~l~~~ 164 (628)
T 4a0p_A 86 AVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE-RTTLVPN 164 (628)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEEECS
T ss_pred EEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc-eEEEECC
Confidence 9987654 455556678899999875433222323345578999999655555554 35688888887443 3333334
Q ss_pred cccEEEEEECCCCCEEEEee-CCCcEEEEEccCCCCCeeEeccC-CCceeEEEccCCeEEEEc-CCEEEec
Q psy9936 174 KAGIQSVAVNHTGTYMATSA-GDSQLRIWDVRNLEGPLNTFRTR-TPINNLAFSQRGLLATSR-GNIVEFL 241 (315)
Q Consensus 174 ~~~i~~~~~sp~g~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~-~~v~~~~~s~~g~~~~~~-~~~i~~~ 241 (315)
-...+.|++++++..|+.+. ..+.|..+|+... .. ..+... .....+++..+..|.+-. .+.|...
T Consensus 165 ~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~-~~-~v~~~~l~~P~glav~~~~ly~tD~~~~~I~~~ 233 (628)
T 4a0p_A 165 VGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGL-NR-EVIADDLPHPFGLTQYQDYIYWTDWSRRSIERA 233 (628)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SC-EEEEECCSCEEEEEEETTEEEEEETTTTEEEEE
T ss_pred CCCcceEEEccccCEEEEEECCCCEEEEEcCCCC-ce-EEeeccCCCceEEEEECCEEEEecCCCCEEEEE
Confidence 45778999999877666654 5668999998765 33 333222 235677776654555543 5556543
No 299
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.32 E-value=0.00059 Score=62.05 Aligned_cols=195 Identities=4% Similarity=-0.118 Sum_probs=118.7
Q ss_pred CcEEEEEEcCCCCEEEEE-cCCCeEEEEEccCceE-EEEec-CCCceeEEEEeecCcEEEEEe--CCeEEEEeCCCCEEE
Q psy9936 11 FGIYRMNYTKNGRHLLLG-GKRGHVAAFDWVRKTL-ACEMN-VMEEVYDIKWLHLETMFAVAQ--KDWVYIYDNQGIELH 85 (315)
Q Consensus 11 ~~v~~~~~s~~~~~l~~~-~~dg~i~v~~~~~~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~--~~~i~i~~~~~~~~~ 85 (315)
..+..++|++.+..|+.+ ...+.|..++++.... ...+. .......+++.+.+..|..+. .+.|.+.++++....
T Consensus 40 ~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~ 119 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK 119 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEE
Confidence 457799999866665544 4567898888876532 22233 235688999998655555543 679999999876544
Q ss_pred Eee--cCCceEEEEEcCCCceEEEEcC--CCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEE-cCCCeEEEEc
Q psy9936 86 CLK--VLNKVTRMEFLPYHFLLATASE--EGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLG-HRNGTVTMWS 160 (315)
Q Consensus 86 ~~~--~~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~-~~d~~i~i~d 160 (315)
.+. .......+++.|.+..|+.+.. .+.|...++............-...+.+++++++..|+.+ ...+.|..+|
T Consensus 120 ~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~ 199 (619)
T 3s94_A 120 VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSN 199 (619)
T ss_dssp EEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEES
T ss_pred EEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEec
Confidence 432 3466789999997555555543 4678777876332222232334568899999976655555 4567899999
Q ss_pred CCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCC
Q psy9936 161 PTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNL 206 (315)
Q Consensus 161 ~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~ 206 (315)
+..........+.......+++..+ ..+++-...+.|...|..++
T Consensus 200 ~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg 244 (619)
T 3s94_A 200 LDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTG 244 (619)
T ss_dssp SSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEESSSC
T ss_pred CCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCC
Confidence 8754322222211222346677655 44444456678988888776
No 300
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.29 E-value=3.4e-06 Score=77.86 Aligned_cols=212 Identities=8% Similarity=-0.016 Sum_probs=123.1
Q ss_pred CcEEEEEEcCCCCEEEEE-cCCCeEEEEEccC----ceEEEEec-CCCceeEEEEeec-CcEEEEE-eCCeEEEEeCCCC
Q psy9936 11 FGIYRMNYTKNGRHLLLG-GKRGHVAAFDWVR----KTLACEMN-VMEEVYDIKWLHL-ETMFAVA-QKDWVYIYDNQGI 82 (315)
Q Consensus 11 ~~v~~~~~s~~~~~l~~~-~~dg~i~v~~~~~----~~~~~~~~-~~~~v~~~~~~~~-~~~l~~~-~~~~i~i~~~~~~ 82 (315)
..+..++|++.+..|+.+ ...+.|+.+++.+ ......+. .......+++.+. +.++++- ..+.|.++++++.
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~ 485 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 485 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence 345688999876666554 3457899998875 22222221 1223556777754 4444433 3678999999876
Q ss_pred EEEEeec--CCceEEEEEcCCCceEEEEcC--CCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEE-EEcCCCeEE
Q psy9936 83 ELHCLKV--LNKVTRMEFLPYHFLLATASE--EGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACIC-LGHRNGTVT 157 (315)
Q Consensus 83 ~~~~~~~--~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~-~~~~d~~i~ 157 (315)
....+.. ......++++|.+..|+.+.. .+.|..+++........+...-...+.|+|+|++..|+ +-...+.|.
T Consensus 486 ~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~ 565 (699)
T 1n7d_A 486 KRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSIS 565 (699)
T ss_dssp CEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEE
T ss_pred ceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEE
Confidence 5554432 355678999997655555443 26788888763322222222234467899999766554 445677999
Q ss_pred EEcCCCCcceeEeec---ccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-CceeEEEc
Q psy9936 158 MWSPTVQKPLASLLC---HKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-PINNLAFS 225 (315)
Q Consensus 158 i~d~~~~~~~~~~~~---~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~s 225 (315)
.+|+.... ...+.. .......|++..+ .++++....+.|..++..++ ..+..+.... .+..|++.
T Consensus 566 ~~d~dG~~-~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G-~~~~~i~~~~~~P~~i~v~ 634 (699)
T 1n7d_A 566 SIDVNGGN-RKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTG-SDVNLLAENLLSPEDMVLF 634 (699)
T ss_dssp EECSSSSC-CEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTE-EEEECCCTTCSSCCCCCBC
T ss_pred EEccCCCc-eEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCC-CceEEeecCCCCCcEEEEe
Confidence 99997433 333321 1123345566443 44555556678999998776 5555554322 24444443
No 301
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.27 E-value=0.00053 Score=62.38 Aligned_cols=207 Identities=8% Similarity=-0.042 Sum_probs=120.4
Q ss_pred EEEEEcCCCeEEEEEccCce--EEEEecCCCceeEEEEeecCcEEEEEe--CCeEEEEeCCCCE--EEEee-cCCceEEE
Q psy9936 24 HLLLGGKRGHVAAFDWVRKT--LACEMNVMEEVYDIKWLHLETMFAVAQ--KDWVYIYDNQGIE--LHCLK-VLNKVTRM 96 (315)
Q Consensus 24 ~l~~~~~dg~i~v~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~~~~~~~--~~~~~-~~~~v~~~ 96 (315)
+|+-+ ....|+..++.... ..........+..++|.+.+..|..+. .+.|..+++++.. ...+. .......+
T Consensus 11 ~~~~~-~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~Gl 89 (619)
T 3s94_A 11 LLLYA-NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGL 89 (619)
T ss_dssp CEEEE-CSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEE
T ss_pred eEEEe-ccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeE
Confidence 44443 45679999987653 222333445678999999766666554 5789999987652 22222 22678899
Q ss_pred EEcCCCc-eEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcC--CCeEEEEcCCCCcceeEeecc
Q psy9936 97 EFLPYHF-LLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHR--NGTVTMWSPTVQKPLASLLCH 173 (315)
Q Consensus 97 ~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~ 173 (315)
++.+.+. ++++-...+.|.+.++........+...-.....+++.|.+..|+.... .+.|...+++...........
T Consensus 90 AvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~ 169 (619)
T 3s94_A 90 ACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSE 169 (619)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSS
T ss_pred EEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCC
Confidence 9999654 5555566789999998754332223233345678999997665555542 467777777643322222223
Q ss_pred cccEEEEEECCCCCEEEEee-CCCcEEEEEccCCCCCeeEec-cCCCceeEEEccCCeEEE
Q psy9936 174 KAGIQSVAVNHTGTYMATSA-GDSQLRIWDVRNLEGPLNTFR-TRTPINNLAFSQRGLLAT 232 (315)
Q Consensus 174 ~~~i~~~~~sp~g~~l~~~~-~d~~i~iwd~~~~~~~~~~~~-~~~~v~~~~~s~~g~~~~ 232 (315)
-...+.++++|++..|+.+. ..+.|..+|+... ....... .-.....+++..+..|.+
T Consensus 170 ~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~-~~~~~~~~~~~~P~gi~~~~~~ly~t 229 (619)
T 3s94_A 170 IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT-NRQAVVKGSLPHPFALTLFEDILYWT 229 (619)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTCCEEEESSSCC-EEC---------CCCEEESSSEEEEE
T ss_pred CCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCC-ccEEEEeCCCCCceEEEEeCCEEEEe
Confidence 45678999999866666554 4567888888754 2222222 111245667766644444
No 302
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.25 E-value=0.00033 Score=58.22 Aligned_cols=171 Identities=11% Similarity=0.146 Sum_probs=109.7
Q ss_pred eCCeEEEEeCCCCEEEEeecCCceEEEEEcCC----Cc---eEE-EEcC--CCeEEEEEcc--CCeEEEEecc------C
Q psy9936 70 QKDWVYIYDNQGIELHCLKVLNKVTRMEFLPY----HF---LLA-TASE--EGYLSWLDTS--IGKIVSDFSA------K 131 (315)
Q Consensus 70 ~~~~i~i~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~l~-~~~~--d~~i~~~d~~--~~~~~~~~~~------~ 131 (315)
..+-+.+||++++.+..+.. +.++.+..-|+ |+ +++ +.-. +++|.+|++. ++. +..+.. .
T Consensus 48 k~~gL~Vydl~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~~~~~pv~t 125 (355)
T 3amr_A 48 KKSGLVVYSLDGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMTDPDHPIAT 125 (355)
T ss_dssp TTTEEEEEETTSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECSCTTSCEEC
T ss_pred CCCCEEEEcCCCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeeccccccCcCC
Confidence 36789999999998887754 56676666653 22 223 3333 5789999773 333 444421 1
Q ss_pred C-CCeEEEEE--cCC-CC-EEEEEcCCCeEEEEcCC-------CCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEE
Q psy9936 132 K-GKLSVMTQ--NPY-NA-CICLGHRNGTVTMWSPT-------VQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLR 199 (315)
Q Consensus 132 ~-~~v~~~~~--~p~-~~-~l~~~~~d~~i~i~d~~-------~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~ 199 (315)
. ..+..+++ +|. +. ++++...+|.+..|++. +.+.++++. ..+.+..+...+....|+.+-++..|.
T Consensus 126 ~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-lgsq~EgcvvDd~~g~Lyv~eEd~GIw 204 (355)
T 3amr_A 126 AINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-MNSQTEGMAADDEYGRLYIAEEDEAIW 204 (355)
T ss_dssp CCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-CSSCEEEEEEETTTTEEEEEETTTEEE
T ss_pred CCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-CCCCcceEEEcCCCCeEEEecccceEE
Confidence 1 45667777 774 44 67788889999999873 235567776 346788888999888999999987676
Q ss_pred EEEccCC----CCCeeEeccC---CCceeEEEc--cCC--eEEEEc--CCEEEecCC
Q psy9936 200 IWDVRNL----EGPLNTFRTR---TPINNLAFS--QRG--LLATSR--GNIVEFLKP 243 (315)
Q Consensus 200 iwd~~~~----~~~~~~~~~~---~~v~~~~~s--~~g--~~~~~~--~~~i~~~~~ 243 (315)
.++.+.. ...+..+... ..+..|++. ++| ++++++ +++..+++.
T Consensus 205 ~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr 261 (355)
T 3amr_A 205 KFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDR 261 (355)
T ss_dssp EEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEES
T ss_pred EEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEEC
Confidence 6665421 0334333322 247777774 443 455554 667766644
No 303
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.20 E-value=0.0021 Score=54.79 Aligned_cols=222 Identities=11% Similarity=0.133 Sum_probs=147.3
Q ss_pred EEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEeCCeEEEEeCCC--CEEEEeecC--
Q psy9936 15 RMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQKDWVYIYDNQG--IELHCLKVL-- 90 (315)
Q Consensus 15 ~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~~~--~~~~~~~~~-- 90 (315)
+.-.+|..+.||.-. ..++.|+|+++.+.+..+...+.|.-=.|..+ +.|+...+..|+-|++++ .+...+..+
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~-~~l~lVT~taVyHWsi~~~s~P~kvFdR~~~ 147 (494)
T 1bpo_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTVALVTDNAVYHWSMEGESQPVKMFDRHSS 147 (494)
T ss_dssp EEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEET-TEEEEECSSEEEEEESSSSCCCEEEEECCGG
T ss_pred eeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCC-CeEEEEcCCeeEEecccCCCCchhheecchh
Confidence 345788888887664 67899999999999998887778877777654 567777889999999954 444555433
Q ss_pred ---CceEEEEEcCCCceEEEEc-------CCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCC---CEEEEEcC---CC
Q psy9936 91 ---NKVTRMEFLPYHFLLATAS-------EEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYN---ACICLGHR---NG 154 (315)
Q Consensus 91 ---~~v~~~~~~~~~~~l~~~~-------~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~---~~l~~~~~---d~ 154 (315)
..|.....+++.++++..+ -.|.+.+|..+. +..+.+.+|......+.+.-+. .++..+.. .+
T Consensus 148 L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~ 226 (494)
T 1bpo_A 148 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGG 226 (494)
T ss_dssp GTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT-CCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCC
T ss_pred cccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc-cccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCc
Confidence 5577777788888877543 246788999874 4456677886655444432211 24444433 27
Q ss_pred eEEEEcCCCC---cc-e--eEe----e--cccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-Ccee
Q psy9936 155 TVTMWSPTVQ---KP-L--ASL----L--CHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-PINN 221 (315)
Q Consensus 155 ~i~i~d~~~~---~~-~--~~~----~--~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~ 221 (315)
.+.|.++... .+ . +.. . ....-..++..|+....++.-+.-|.|++||+.++ .++..-+... +|..
T Consensus 227 kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTg-t~i~~nrIs~~~iF~ 305 (494)
T 1bpo_A 227 KLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETG-TCIYMNRISGETIFV 305 (494)
T ss_dssp EEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTC-CEEEEEECCSSCEEE
T ss_pred EEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccc-eeeeeecccCCceEE
Confidence 8999988542 11 1 111 1 11233457888888888888899999999999999 8777766544 4433
Q ss_pred EEEcc--CCeEEEEcCCEEEe
Q psy9936 222 LAFSQ--RGLLATSRGNIVEF 240 (315)
Q Consensus 222 ~~~s~--~g~~~~~~~~~i~~ 240 (315)
.+-+. .|.+.+...|.+-.
T Consensus 306 t~~~~~~~Gi~~Vnr~GqVl~ 326 (494)
T 1bpo_A 306 TAPHEATAGIIGVNRKGQVLS 326 (494)
T ss_dssp EEEETTTTEEEEEETTCEEEE
T ss_pred ecccCCCCcEEEEccCceEEE
Confidence 33332 23566666776653
No 304
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.19 E-value=0.0014 Score=55.22 Aligned_cols=219 Identities=12% Similarity=0.085 Sum_probs=119.9
Q ss_pred CcEEEEEEcCCCC-EEEEEcCCCeEEEEEccCceEEEE---e-----cCCCceeEEEEeec----CcEEEEEe-------
Q psy9936 11 FGIYRMNYTKNGR-HLLLGGKRGHVAAFDWVRKTLACE---M-----NVMEEVYDIKWLHL----ETMFAVAQ------- 70 (315)
Q Consensus 11 ~~v~~~~~s~~~~-~l~~~~~dg~i~v~~~~~~~~~~~---~-----~~~~~v~~~~~~~~----~~~l~~~~------- 70 (315)
..+..|+|.|+|+ ++++ ...|.|++++.. +..... + ........++|+|+ +.++++-.
T Consensus 18 ~~P~~i~~~pdG~~l~V~-e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLIT-LRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp SSEEEEEECSTTCCEEEE-ETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CCcEEEEEcCCCCEEEEE-eCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 4568999999998 5554 567899999853 332211 1 12235789999995 55444432
Q ss_pred -CCeEEEEeCCCC-----EEEE-eec-------CCceEEEEEcCCCceEEEEcC-------------CCeEEEEEccCCe
Q psy9936 71 -KDWVYIYDNQGI-----ELHC-LKV-------LNKVTRMEFLPYHFLLATASE-------------EGYLSWLDTSIGK 123 (315)
Q Consensus 71 -~~~i~i~~~~~~-----~~~~-~~~-------~~~v~~~~~~~~~~~l~~~~~-------------d~~i~~~d~~~~~ 123 (315)
...|..++.+.. .... +.. ......+.|.|+|.++++.+. .|.|.-++....-
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~ 175 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEI 175 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCC
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCC
Confidence 124666665321 1111 111 122457999999966655433 2467777765220
Q ss_pred ------------EEEEe-ccCCCCeEEEEEcC-CCCEEEEEc-CCCeEEEEcCCCC------------------------
Q psy9936 124 ------------IVSDF-SAKKGKLSVMTQNP-YNACICLGH-RNGTVTMWSPTVQ------------------------ 164 (315)
Q Consensus 124 ------------~~~~~-~~~~~~v~~~~~~p-~~~~l~~~~-~d~~i~i~d~~~~------------------------ 164 (315)
....+ .++ .....++|+| +|+++++-. .++.=.|.-+..+
T Consensus 176 p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~ 254 (353)
T 2g8s_A 176 PDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKG 254 (353)
T ss_dssp CTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCB
T ss_pred CCCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccC
Confidence 11111 122 2367899999 666554422 1211122211111
Q ss_pred -------cceeEeecccccEEEEEECC-------CCCEEEEeeCCCcEEEEEccCCCCCeeE--ec-c-CCCceeEEEcc
Q psy9936 165 -------KPLASLLCHKAGIQSVAVNH-------TGTYMATSAGDSQLRIWDVRNLEGPLNT--FR-T-RTPINNLAFSQ 226 (315)
Q Consensus 165 -------~~~~~~~~~~~~i~~~~~sp-------~g~~l~~~~~d~~i~iwd~~~~~~~~~~--~~-~-~~~v~~~~~s~ 226 (315)
.++..+. +...+..+.|.. +|.++++.-..+.|...++..+ ..... +- . ...+..+++.|
T Consensus 255 ~~~~~~~~P~~~~~-~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~rp~~v~~~p 332 (353)
T 2g8s_A 255 EIVAGTEQPVFYWK-DSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGD-KVTEDGRILTDRGQRIRDVRTGP 332 (353)
T ss_dssp SSCTTSCCCSEEES-SCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETT-EEEEEEEESGGGCCCEEEEEECT
T ss_pred CCCCCccCCeEEeC-CCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCC-eEeeeEEcccCCCCceeEEEECC
Confidence 1122222 234567788863 4667766666778888888754 43322 21 1 23588999999
Q ss_pred CCe-EEEEc
Q psy9936 227 RGL-LATSR 234 (315)
Q Consensus 227 ~g~-~~~~~ 234 (315)
||. ++++.
T Consensus 333 dG~lyv~td 341 (353)
T 2g8s_A 333 DGYLYVLTD 341 (353)
T ss_dssp TSCEEEEEC
T ss_pred CCcEEEEEe
Confidence 995 55443
No 305
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.15 E-value=0.00093 Score=58.57 Aligned_cols=193 Identities=7% Similarity=0.009 Sum_probs=116.1
Q ss_pred cEEEEEE-------cCCCCEEEEEcCCC-------eEEEEEccC-ceEE-----EEecCCCceeEEEEeec-CcEEEEEe
Q psy9936 12 GIYRMNY-------TKNGRHLLLGGKRG-------HVAAFDWVR-KTLA-----CEMNVMEEVYDIKWLHL-ETMFAVAQ 70 (315)
Q Consensus 12 ~v~~~~~-------s~~~~~l~~~~~dg-------~i~v~~~~~-~~~~-----~~~~~~~~v~~~~~~~~-~~~l~~~~ 70 (315)
.+..++| +++|.+|+++...+ .|.+++... +... ..+........++.+|+ +.++++..
T Consensus 187 ~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~ 266 (496)
T 3kya_A 187 RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSY 266 (496)
T ss_dssp BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEET
T ss_pred CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEEC
Confidence 5899999 99999666655443 366665333 2221 12221223467788995 45454443
Q ss_pred -CCeEEEEeCC-------CCEE-------------E--EeecCCceEEEEEcCCCceEEE-EcCCCeEEEEEcc--CCeE
Q psy9936 71 -KDWVYIYDNQ-------GIEL-------------H--CLKVLNKVTRMEFLPYHFLLAT-ASEEGYLSWLDTS--IGKI 124 (315)
Q Consensus 71 -~~~i~i~~~~-------~~~~-------------~--~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~~d~~--~~~~ 124 (315)
++.|+.+|+. +..+ . ..........++|+|+|+.|+. -+..+.|+.++.. .+..
T Consensus 267 ~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~ 346 (496)
T 3kya_A 267 EKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEF 346 (496)
T ss_dssp TTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEE
T ss_pred CCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCccee
Confidence 6789999986 3322 1 1222245689999999995444 4567789986654 2321
Q ss_pred --EEEeccC---C------------CCeE-EEEEc-------CCCCEEEEEcCCCeEEEEcCCCCcceeEeecc------
Q psy9936 125 --VSDFSAK---K------------GKLS-VMTQN-------PYNACICLGHRNGTVTMWSPTVQKPLASLLCH------ 173 (315)
Q Consensus 125 --~~~~~~~---~------------~~v~-~~~~~-------p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~------ 173 (315)
...+.+. . .... .++.. ++|.++++-..++.|+.++. ++ .+.++-+.
T Consensus 347 ~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G-~v~TiaG~g~~~~~ 424 (496)
T 3kya_A 347 ITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EG-IVSTYAGRGASTSL 424 (496)
T ss_dssp CCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT-TC-BEEEEEESCTTHHH
T ss_pred cccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeC-CC-CEEEEecccccccc
Confidence 0122111 0 1244 45554 56677777677889999994 45 34444322
Q ss_pred ------------------cccEEEEEECCC-CCEEEEeeCCCcEEEEEccCC
Q psy9936 174 ------------------KAGIQSVAVNHT-GTYMATSAGDSQLRIWDVRNL 206 (315)
Q Consensus 174 ------------------~~~i~~~~~sp~-g~~l~~~~~d~~i~iwd~~~~ 206 (315)
-.....|+++++ |.++++=..+..|+.+++...
T Consensus 425 ~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 425 ADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp HHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCC
T ss_pred cCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCC
Confidence 124678999987 766666666778999988765
No 306
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.11 E-value=0.0021 Score=53.90 Aligned_cols=188 Identities=14% Similarity=0.196 Sum_probs=114.5
Q ss_pred CcEEEEEEcCCCCEEEEEc------------CCCeEEEEEccC--ceEEEEecC--------CCceeEEEEee--cCc--
Q psy9936 11 FGIYRMNYTKNGRHLLLGG------------KRGHVAAFDWVR--KTLACEMNV--------MEEVYDIKWLH--LET-- 64 (315)
Q Consensus 11 ~~v~~~~~s~~~~~l~~~~------------~dg~i~v~~~~~--~~~~~~~~~--------~~~v~~~~~~~--~~~-- 64 (315)
.+.-.++..|+|..+++++ .+|.|.++|..+ .+. ..+.. .-....+.+.+ ++.
T Consensus 50 ~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~-~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~ 128 (355)
T 3sre_A 50 NGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAV-SELEIIGNTLDISSFNPHGISTFIDDDNTVY 128 (355)
T ss_dssp SCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCE-EECEEECSSCCGGGCCEEEEEEEECTTCCEE
T ss_pred CCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCce-EEEEccCCCCCcCceeeeeeEEEECCCCcEE
Confidence 4567788889886555542 689999999873 232 22221 12567788766 343
Q ss_pred EEEEEe---CCeEEEEeC--CCCEEEEee---c--CCceEEEEEcCCCceEEEEc-----------------CCCeEEEE
Q psy9936 65 MFAVAQ---KDWVYIYDN--QGIELHCLK---V--LNKVTRMEFLPYHFLLATAS-----------------EEGYLSWL 117 (315)
Q Consensus 65 ~l~~~~---~~~i~i~~~--~~~~~~~~~---~--~~~v~~~~~~~~~~~l~~~~-----------------~d~~i~~~ 117 (315)
++++-. +..|.+|++ .+.....+. + ....+.+.+.++|.+.++.. ..|.|..+
T Consensus 129 L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~ 208 (355)
T 3sre_A 129 LLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYY 208 (355)
T ss_dssp EEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEE
T ss_pred EEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEE
Confidence 444432 357777765 444433332 2 25678999999998777654 12455555
Q ss_pred EccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEc-CCCeEEEEcCCC-Ccc--eeEeecccccEEEEEECC-CCCEEEEe
Q psy9936 118 DTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGH-RNGTVTMWSPTV-QKP--LASLLCHKAGIQSVAVNH-TGTYMATS 192 (315)
Q Consensus 118 d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~-~d~~i~i~d~~~-~~~--~~~~~~~~~~i~~~~~sp-~g~~l~~~ 192 (315)
|. ++. ..+...-...+.++|+||++.|+.+. ..+.|..|++.. ++. ...+ ...+..-.+++.+ +|++.+++
T Consensus 209 d~--~~~-~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 209 SP--NDV-RVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp CT--TCC-EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEE
T ss_pred EC--CeE-EEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEe
Confidence 54 322 22222334578999999998776654 578999999863 321 1233 2346678899999 59987766
Q ss_pred eCCC-cEEEEEc
Q psy9936 193 AGDS-QLRIWDV 203 (315)
Q Consensus 193 ~~d~-~i~iwd~ 203 (315)
..++ .|..|+.
T Consensus 285 ~~~g~~v~~~~P 296 (355)
T 3sre_A 285 HPNGMRIFFYDA 296 (355)
T ss_dssp ESCHHHHHSCCT
T ss_pred cCCceEEEEECC
Confidence 5443 3444443
No 307
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.10 E-value=0.0024 Score=53.59 Aligned_cols=178 Identities=10% Similarity=0.083 Sum_probs=107.2
Q ss_pred ceeEEEEeecCcEEEEE-------------eCCeEEEEeCCC--CEEEEeecC--------CceEEEEEcC--CCc--eE
Q psy9936 53 EVYDIKWLHLETMFAVA-------------QKDWVYIYDNQG--IELHCLKVL--------NKVTRMEFLP--YHF--LL 105 (315)
Q Consensus 53 ~v~~~~~~~~~~~l~~~-------------~~~~i~i~~~~~--~~~~~~~~~--------~~v~~~~~~~--~~~--~l 105 (315)
..-++...|+|..++++ .+|.|.++|.+. .....+... -....+.+.+ ++. ++
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 45566777888777765 478999999852 233333221 2566777765 343 44
Q ss_pred EEEcC--CCeEEEEEccCC--e--EEEEeccC-CCCeEEEEEcCCCCEEEEEc-----------------CCCeEEEEcC
Q psy9936 106 ATASE--EGYLSWLDTSIG--K--IVSDFSAK-KGKLSVMTQNPYNACICLGH-----------------RNGTVTMWSP 161 (315)
Q Consensus 106 ~~~~~--d~~i~~~d~~~~--~--~~~~~~~~-~~~v~~~~~~p~~~~l~~~~-----------------~d~~i~i~d~ 161 (315)
++-.. +.+|.+|++... . .+..+.+. -...+.+.+.++|.++++.. ..|.|.-+|.
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~ 210 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP 210 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence 44333 567888877643 2 23333322 23578999999998777654 1245555555
Q ss_pred CCCcceeEeecccccEEEEEECCCCCEEEEee-CCCcEEEEEccCCCCC--eeEeccCCCceeEEEcc-CCe-EEEE
Q psy9936 162 TVQKPLASLLCHKAGIQSVAVNHTGTYMATSA-GDSQLRIWDVRNLEGP--LNTFRTRTPINNLAFSQ-RGL-LATS 233 (315)
Q Consensus 162 ~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~-~d~~i~iwd~~~~~~~--~~~~~~~~~v~~~~~s~-~g~-~~~~ 233 (315)
++ +..+...-...+.++||||+++|+.+. ..+.|..|++...... ...+......-.+++++ +|. ++++
T Consensus 211 --~~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 211 --ND-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp --TC-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEE
T ss_pred --Ce-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEe
Confidence 33 333332335678999999998777665 5678999998743122 12333333467888888 575 4444
No 308
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.93 E-value=0.0051 Score=51.78 Aligned_cols=139 Identities=12% Similarity=0.134 Sum_probs=84.0
Q ss_pred CceeEEEEeecCcEEEEEeCCeEEEEeCCCCEEEEe---e----cCCceEEEEEcCC---CceEEEEcC-C-----CeEE
Q psy9936 52 EEVYDIKWLHLETMFAVAQKDWVYIYDNQGIELHCL---K----VLNKVTRMEFLPY---HFLLATASE-E-----GYLS 115 (315)
Q Consensus 52 ~~v~~~~~~~~~~~l~~~~~~~i~i~~~~~~~~~~~---~----~~~~v~~~~~~~~---~~~l~~~~~-d-----~~i~ 115 (315)
.....++|.|+|+++++...+.|++++ ++. ...+ . .......++++|+ +..|+++.. . +.|.
T Consensus 31 ~~P~~ia~~pdG~l~V~e~~g~I~~i~-~g~-~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIAERPGRIRLFR-EGR-LSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp SCEEEEEECTTSCEEEEETTTEEEEEE-TTE-EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CCceEEEEcCCCeEEEEeCCCeEEEEE-CCC-ccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 456799999999988887789999998 443 2221 1 1256889999998 444544432 2 5788
Q ss_pred EEEccCCe-----EE-EEec---cCCCCeEEEEEcCCCCEEEEEcC-------------CCeEEEEcCCCC---------
Q psy9936 116 WLDTSIGK-----IV-SDFS---AKKGKLSVMTQNPYNACICLGHR-------------NGTVTMWSPTVQ--------- 164 (315)
Q Consensus 116 ~~d~~~~~-----~~-~~~~---~~~~~v~~~~~~p~~~~l~~~~~-------------d~~i~i~d~~~~--------- 164 (315)
.|+...+. .+ ..+. ........++|.|||.++++.+. .+.|.-++....
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~ 188 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLG 188 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTT
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccC
Confidence 88876431 11 1132 11112467999999976665432 256777776531
Q ss_pred ---cceeEe-ecccccEEEEEECC-CCCEEEEee
Q psy9936 165 ---KPLASL-LCHKAGIQSVAVNH-TGTYMATSA 193 (315)
Q Consensus 165 ---~~~~~~-~~~~~~i~~~~~sp-~g~~l~~~~ 193 (315)
.....+ .++. ....++|+| +|.++++-.
T Consensus 189 ~~~~~~~i~a~G~r-np~g~a~d~~~g~l~v~d~ 221 (352)
T 2ism_A 189 RRGARPEVYSLGHR-NPQGLAWHPKTGELFSSEH 221 (352)
T ss_dssp CTTSCTTEEEECCS-EECCCEECTTTCCEEEEEE
T ss_pred CCCCCccEEEEcCC-CcccEEEECCCCCEEEEEc
Confidence 011111 2333 356889999 677655543
No 309
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.88 E-value=0.0039 Score=54.76 Aligned_cols=219 Identities=11% Similarity=0.074 Sum_probs=127.9
Q ss_pred EEEEEcCCCeEEEEEccCceEEEEecC-C-------------------------Ccee--EEEEe---ecCcEEEEEe--
Q psy9936 24 HLLLGGKRGHVAAFDWVRKTLACEMNV-M-------------------------EEVY--DIKWL---HLETMFAVAQ-- 70 (315)
Q Consensus 24 ~l~~~~~dg~i~v~~~~~~~~~~~~~~-~-------------------------~~v~--~~~~~---~~~~~l~~~~-- 70 (315)
.+.+|+..|.|+|+-+.+++.+..+.. . +... .+++. .||++|..-.
T Consensus 72 ~f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdka 151 (638)
T 3sbq_A 72 GFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKA 151 (638)
T ss_dssp EEEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETT
T ss_pred EEeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCC
Confidence 356788899999999999998776641 0 1111 23332 2577887776
Q ss_pred CCeEEEEeCCC---CEEEEeecCCceEEEEEc--CCCceEEEEcC-------CCeE------------EEEEccCCeEEE
Q psy9936 71 KDWVYIYDNQG---IELHCLKVLNKVTRMEFL--PYHFLLATASE-------EGYL------------SWLDTSIGKIVS 126 (315)
Q Consensus 71 ~~~i~i~~~~~---~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~-------d~~i------------~~~d~~~~~~~~ 126 (315)
+..|-..+++. .++..++....+..+.|. |+..++++++. ||.. ...|..+.+...
T Consensus 152 n~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~v~~ 231 (638)
T 3sbq_A 152 NSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETMEMAF 231 (638)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCSEEE
T ss_pred CcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccEEEE
Confidence 45666667644 344445556788888886 67777777754 3221 112323333222
Q ss_pred EeccCCCCeEEEEEcCCCCEEEEEcCC--------------------------------------C--eEEEEcCCC---
Q psy9936 127 DFSAKKGKLSVMTQNPYNACICLGHRN--------------------------------------G--TVTMWSPTV--- 163 (315)
Q Consensus 127 ~~~~~~~~v~~~~~~p~~~~l~~~~~d--------------------------------------~--~i~i~d~~~--- 163 (315)
++.. .+....+...++|.+.++.+.+ + .+.+.|.+.
T Consensus 232 Qv~v-~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~~~~~~ 310 (638)
T 3sbq_A 232 QVIV-DGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDGRKKDG 310 (638)
T ss_dssp EEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSCBTT
T ss_pred EEEc-CCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEccccccc
Confidence 2211 1122334556777776665433 1 344555443
Q ss_pred -CcceeEeecccccEEEEEECCCCCEEEEee-CCCcEEEEEccCCC-----CC-------eeEeccCCCceeEEEccCCe
Q psy9936 164 -QKPLASLLCHKAGIQSVAVNHTGTYMATSA-GDSQLRIWDVRNLE-----GP-------LNTFRTRTPINNLAFSQRGL 229 (315)
Q Consensus 164 -~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~-~d~~i~iwd~~~~~-----~~-------~~~~~~~~~v~~~~~s~~g~ 229 (315)
+..+..+-.-......+.++|||+|++.++ .+.++.++|+.... +. +...+...+....+|+++|.
T Consensus 311 ~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~ 390 (638)
T 3sbq_A 311 KDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGN 390 (638)
T ss_dssp BCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSE
T ss_pred cCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCc
Confidence 222222222234456789999999887765 57789999998420 11 22333444688999999995
Q ss_pred EEEE--cCCEEEecCC
Q psy9936 230 LATS--RGNIVEFLKP 243 (315)
Q Consensus 230 ~~~~--~~~~i~~~~~ 243 (315)
...+ -|+.|..|+.
T Consensus 391 aYTtlfidSqvvkWni 406 (638)
T 3sbq_A 391 AYTTLFIDSQVVKWNM 406 (638)
T ss_dssp EEEEETTTTEEEEEEH
T ss_pred eEeeeeecceEEEEec
Confidence 4333 4888887654
No 310
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.86 E-value=0.0016 Score=53.33 Aligned_cols=181 Identities=10% Similarity=0.099 Sum_probs=98.3
Q ss_pred CCCEEEEEcCC-----CeEEEEEccCce---EEEEecCC-CceeEEEEeecCcEEEEEe------CCeEEEEeCCCCEEE
Q psy9936 21 NGRHLLLGGKR-----GHVAAFDWVRKT---LACEMNVM-EEVYDIKWLHLETMFAVAQ------KDWVYIYDNQGIELH 85 (315)
Q Consensus 21 ~~~~l~~~~~d-----g~i~v~~~~~~~---~~~~~~~~-~~v~~~~~~~~~~~l~~~~------~~~i~i~~~~~~~~~ 85 (315)
++..++.|+.+ ..+.+||..+.+ ....-... ......+...++++++.++ -..+.+||+......
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~ 141 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWS 141 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEE
Confidence 56667777654 368899988766 43332211 1111122223677777664 246899999776655
Q ss_pred EeecC---CceEEEEEcCCCceEEEEcCC-----CeEEEEEccCCeEEEE--eccCCCCeEEEEEcCCCCEEEEEcCC--
Q psy9936 86 CLKVL---NKVTRMEFLPYHFLLATASEE-----GYLSWLDTSIGKIVSD--FSAKKGKLSVMTQNPYNACICLGHRN-- 153 (315)
Q Consensus 86 ~~~~~---~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~--~~~~~~~v~~~~~~p~~~~l~~~~~d-- 153 (315)
.+... ..-.++. ..++.+++.|+.+ ..+.+||+.+.+-... +.........+.+ ++.+++.|+.+
T Consensus 142 ~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~ 218 (301)
T 2vpj_A 142 MLGDMQTAREGAGLV-VASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGT 218 (301)
T ss_dssp EEEECSSCCBSCEEE-EETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSS
T ss_pred ECCCCCCCcccceEE-EECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCC
Confidence 54322 1111222 2267777777654 4588999987754433 1111111222232 56777777764
Q ss_pred ---CeEEEEcCCCCccee--EeecccccEEEEEECCCCCEEEEeeCCC-----cEEEEEccCC
Q psy9936 154 ---GTVTMWSPTVQKPLA--SLLCHKAGIQSVAVNHTGTYMATSAGDS-----QLRIWDVRNL 206 (315)
Q Consensus 154 ---~~i~i~d~~~~~~~~--~~~~~~~~i~~~~~sp~g~~l~~~~~d~-----~i~iwd~~~~ 206 (315)
..+.+||+.+.+... .+.........+.+ ++++++.|+.++ .+.+||+.+.
T Consensus 219 ~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 219 AHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp SBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred cccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 468999998764322 12111111122222 677777777653 5778887764
No 311
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.80 E-value=0.0044 Score=52.72 Aligned_cols=140 Identities=16% Similarity=0.201 Sum_probs=93.1
Q ss_pred eecCcEEEEEeCCeEEEEeCC-CCEEEEeec-----CCceEEEEEcCCCceEEEEcCCCeEEEEEccCCe----------
Q psy9936 60 LHLETMFAVAQKDWVYIYDNQ-GIELHCLKV-----LNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGK---------- 123 (315)
Q Consensus 60 ~~~~~~l~~~~~~~i~i~~~~-~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~---------- 123 (315)
..+|.-++.+.++.|+.-++. ....+.+.. ...+..+..+|+|.+||..+. ..|.|..+..+.
T Consensus 29 ~~n~t~i~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 29 SQNGTRIVFIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp ETTTTEEEEEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHH
T ss_pred EcCCCEEEEEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCccccccc
Confidence 346667777777888877764 333333332 235778999999998888764 478888876321
Q ss_pred --EEEEecc------CCCCeEEEEEcCCC---CEEEEEcCCCeEEEEcCCCC--cceeEee---------cccccEEEEE
Q psy9936 124 --IVSDFSA------KKGKLSVMTQNPYN---ACICLGHRNGTVTMWSPTVQ--KPLASLL---------CHKAGIQSVA 181 (315)
Q Consensus 124 --~~~~~~~------~~~~v~~~~~~p~~---~~l~~~~~d~~i~i~d~~~~--~~~~~~~---------~~~~~i~~~~ 181 (315)
..+.+.. ...+|..+.|+|-+ ..|++-..|+.|++||+... ++. .+. .....|.+++
T Consensus 108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~ 186 (452)
T 3pbp_A 108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLE 186 (452)
T ss_dssp TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEE
T ss_pred ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEE
Confidence 1122221 24679999999954 58999999999999998852 233 222 1225788999
Q ss_pred ECCCCCEEEEee--CCCcEEEE
Q psy9936 182 VNHTGTYMATSA--GDSQLRIW 201 (315)
Q Consensus 182 ~sp~g~~l~~~~--~d~~i~iw 201 (315)
|.++|-.|...+ ..|.|+-.
T Consensus 187 Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 187 FSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ECTTSSCEEEEECTTSCEEEEE
T ss_pred EcCCCcEEEEEecCCCCCEEEE
Confidence 999887666644 77776543
No 312
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.79 E-value=0.0099 Score=48.79 Aligned_cols=175 Identities=11% Similarity=-0.024 Sum_probs=107.5
Q ss_pred EEEcCCCCEEEEEcC--------------CCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEe---C--CeEEE
Q psy9936 16 MNYTKNGRHLLLGGK--------------RGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQ---K--DWVYI 76 (315)
Q Consensus 16 ~~~s~~~~~l~~~~~--------------dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~--~~i~i 76 (315)
--++++|.+|+.+.. ...|+..++++.+....... ....|++++..|+.+. + ..|+.
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~----~~~~~s~~g~~Iy~~~~~~~~~~~Iy~ 133 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPD----PCIYASLIGNYIYYLHYDTQTATSLYR 133 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECS----CEEEEEEETTEEEEEEESSSSCEEEEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecC----CccEEEEeCCEEEEEeecCCCCceEEE
Confidence 346888998886643 24678888877654333221 1236788888887665 3 46777
Q ss_pred EeCCCCEEEEeecCCceEEEEEcCCCceEEEEcC-CCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCC--
Q psy9936 77 YDNQGIELHCLKVLNKVTRMEFLPYHFLLATASE-EGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRN-- 153 (315)
Q Consensus 77 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d-- 153 (315)
.++++.....+..... ..++|+++.|+-.+. ...|.+.++..+.....+. +... ..++|++.+|+.....
T Consensus 134 ~~~dGs~~~~lt~~~~---~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~---~~~~-~~~~P~g~~iy~t~~~~~ 206 (302)
T 3s25_A 134 IRIDGEEKKKIKNHYL---FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD---CNCY-KPVVLDDTNVYYMDVNRD 206 (302)
T ss_dssp EETTSCCCEEEESSCC---CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC---SCEE-EEEEEETTEEEEEEGGGT
T ss_pred EECCCCCeEEEeCCCc---eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC---CCcc-ceeeecCCEEEEEEcCCC
Confidence 7777765555544322 456778887776654 5678888887665443333 2222 3456999888766543
Q ss_pred CeEEEEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeC--CCcEEEEEccCC
Q psy9936 154 GTVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAG--DSQLRIWDVRNL 206 (315)
Q Consensus 154 ~~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~--d~~i~iwd~~~~ 206 (315)
..|..-++.... ...+. ...+ ..|+|++.+|+.++. .+.|..-++...
T Consensus 207 ~~I~~~~ldG~~-~~~Lt--~~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~ 256 (302)
T 3s25_A 207 NAIVHVNINNPN-PVVLT--EANI--EHYNVYGSLIFYQRGGDNPALCVVKNDGT 256 (302)
T ss_dssp TEEEEECSSSCC-CEECS--CSCE--EEEEEETTEEEEEECSSSCEEEEEETTSC
T ss_pred cEEEEEECCCCC-eEEEe--CCCc--ceEEECCCEEEEEECCCCcEEEEEECCCC
Confidence 467777777554 33443 2233 348889998876643 345666666553
No 313
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.79 E-value=0.0052 Score=50.23 Aligned_cols=181 Identities=12% Similarity=0.160 Sum_probs=97.5
Q ss_pred CCCEEEEEc-CC-----CeEEEEEccCceEEEEecCC-CceeEEEEeecCcEEEEEe-C-----CeEEEEeCCCCE---E
Q psy9936 21 NGRHLLLGG-KR-----GHVAAFDWVRKTLACEMNVM-EEVYDIKWLHLETMFAVAQ-K-----DWVYIYDNQGIE---L 84 (315)
Q Consensus 21 ~~~~l~~~~-~d-----g~i~v~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~-~-----~~i~i~~~~~~~---~ 84 (315)
++..++.|+ .+ ..+.+||..+.+....-... ..........++.+++.|+ + ..+.+||+.... .
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W 93 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVW 93 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCee
Confidence 455667776 32 36889999887754432211 1122222334667766664 2 468999986544 4
Q ss_pred EEeecC---CceEEEEEcCCCceEEEEcCC-----CeEEEEEccCCeEEEE--eccCCCCeEEEEEcCCCCEEEEEcCC-
Q psy9936 85 HCLKVL---NKVTRMEFLPYHFLLATASEE-----GYLSWLDTSIGKIVSD--FSAKKGKLSVMTQNPYNACICLGHRN- 153 (315)
Q Consensus 85 ~~~~~~---~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~--~~~~~~~v~~~~~~p~~~~l~~~~~d- 153 (315)
..+... ..-.++.. .++.+++.|+.+ ..+.+||+.+.+-... +.........+.+ ++++++.|+.+
T Consensus 94 ~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~ 170 (301)
T 2vpj_A 94 YSVAPMNVRRGLAGATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDG 170 (301)
T ss_dssp EEECCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCS
T ss_pred EECCCCCCCccceeEEE-ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCC
Confidence 433221 11112222 256777777643 3588999887753332 2211111222222 67777777654
Q ss_pred ----CeEEEEcCCCCccee--EeecccccEEEEEECCCCCEEEEeeCC-----CcEEEEEccCC
Q psy9936 154 ----GTVTMWSPTVQKPLA--SLLCHKAGIQSVAVNHTGTYMATSAGD-----SQLRIWDVRNL 206 (315)
Q Consensus 154 ----~~i~i~d~~~~~~~~--~~~~~~~~i~~~~~sp~g~~l~~~~~d-----~~i~iwd~~~~ 206 (315)
..+.+||+.+.+-.. .+.........+.+ ++.+++.|+.+ ..+.+||+.+.
T Consensus 171 ~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~ 232 (301)
T 2vpj_A 171 LNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTD 232 (301)
T ss_dssp SCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCC
Confidence 468899988764322 12111111122222 56777777764 35889998874
No 314
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.78 E-value=0.012 Score=49.16 Aligned_cols=220 Identities=10% Similarity=0.061 Sum_probs=122.4
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEE--Eec-----CCCceeEEEEeec----CcEEEEE---eCCeEE
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLAC--EMN-----VMEEVYDIKWLHL----ETMFAVA---QKDWVY 75 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~--~~~-----~~~~v~~~~~~~~----~~~l~~~---~~~~i~ 75 (315)
-.....|+|.|||.++++-...|.|++++..+++... .+. .......++++|+ +.+.++- .++.|.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 3567899999999988776558999999866555322 221 2346789999985 5444432 245666
Q ss_pred EEeCCC----------CEEE--Eeec--CCceEEEEEcCCCceEEEEcC-------------CCeEEEEEccCC------
Q psy9936 76 IYDNQG----------IELH--CLKV--LNKVTRMEFLPYHFLLATASE-------------EGYLSWLDTSIG------ 122 (315)
Q Consensus 76 i~~~~~----------~~~~--~~~~--~~~v~~~~~~~~~~~l~~~~~-------------d~~i~~~d~~~~------ 122 (315)
-|...+ .+.. .+.. ......|.|.|+|.++++.+. .|.|.-++....
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nP 190 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNP 190 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCS
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCC
Confidence 665533 1111 1211 123456999999987766542 355555555421
Q ss_pred ---eEEEEeccCCCCeEEEEEcCCCCEEEEE-cCCC--eEEEEcC--------CCC--------cceeEeecccccEEEE
Q psy9936 123 ---KIVSDFSAKKGKLSVMTQNPYNACICLG-HRNG--TVTMWSP--------TVQ--------KPLASLLCHKAGIQSV 180 (315)
Q Consensus 123 ---~~~~~~~~~~~~v~~~~~~p~~~~l~~~-~~d~--~i~i~d~--------~~~--------~~~~~~~~~~~~i~~~ 180 (315)
..+.. .+|.. ...++|+|+|.++++- +.++ .|..... ..+ .++..+..+......+
T Consensus 191 f~~~~i~a-~G~RN-p~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~ 268 (347)
T 3das_A 191 FPGSPVYS-YGHRN-VQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGI 268 (347)
T ss_dssp STTCCEEE-BCCSB-CCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEE
T ss_pred CCCCeEEe-eCCCC-cceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCcce
Confidence 11111 23433 4679999998766553 2232 2332211 001 1233333222356677
Q ss_pred EECCCCCEEEEeeCCCcEEEEEccCCCCC----eeEecc-CCCceeEEEccCCeEEEE
Q psy9936 181 AVNHTGTYMATSAGDSQLRIWDVRNLEGP----LNTFRT-RTPINNLAFSQRGLLATS 233 (315)
Q Consensus 181 ~~sp~g~~l~~~~~d~~i~iwd~~~~~~~----~~~~~~-~~~v~~~~~s~~g~~~~~ 233 (315)
+|. +|..+...-..+.|....+... .. ...+.. ...+.+++..|||.+.++
T Consensus 269 ~~~-~g~~~~~~l~~~~l~~v~~~~~-~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~ 324 (347)
T 3das_A 269 AYA-EGSVWMAGLRGERLWRIPLKGT-AAAADPQAFLEGEYGRLRTVAPAGGDKLWLV 324 (347)
T ss_dssp EEE-TTEEEEEESTTCSEEEEEEETT-EESSCCEEESTTTSSCEEEEEEEETTEEEEE
T ss_pred EEE-cCceeeccccCCEEEEEEecCC-ceecceEEeecCCCCCccEEEECCCCcEEEE
Confidence 776 4555555555556766666543 21 112222 235899999999954443
No 315
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.75 E-value=0.0075 Score=49.42 Aligned_cols=220 Identities=6% Similarity=-0.023 Sum_probs=113.2
Q ss_pred CEEEEEcCC--CeEEEEEccCceEEEEecCC-CceeEEEEeecCcEEEEEe-C----CeEEEEeCCCCEEEEeecC--Cc
Q psy9936 23 RHLLLGGKR--GHVAAFDWVRKTLACEMNVM-EEVYDIKWLHLETMFAVAQ-K----DWVYIYDNQGIELHCLKVL--NK 92 (315)
Q Consensus 23 ~~l~~~~~d--g~i~v~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~-~----~~i~i~~~~~~~~~~~~~~--~~ 92 (315)
..++.|+.+ ..+.+||..+.+....-... ..........++.+++.|+ + ..+.+||+.......+... ..
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r 92 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPR 92 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCC
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccc
Confidence 355566643 57899999888765432211 1112222234666766664 2 5789999977665554422 11
Q ss_pred e-EEEEEcCCCceEEEEcCC------CeEEEEEccCCeEEEE--eccCCCCeEEEEEcCCCCEEEEEcC---------CC
Q psy9936 93 V-TRMEFLPYHFLLATASEE------GYLSWLDTSIGKIVSD--FSAKKGKLSVMTQNPYNACICLGHR---------NG 154 (315)
Q Consensus 93 v-~~~~~~~~~~~l~~~~~d------~~i~~~d~~~~~~~~~--~~~~~~~v~~~~~~p~~~~l~~~~~---------d~ 154 (315)
. .++. ..++.+++.|+.+ ..+.+||+.+.+-... +.........+. -++.+++.|+. -.
T Consensus 93 ~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~ 169 (306)
T 3ii7_A 93 DSLAAC-AAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVLN 169 (306)
T ss_dssp BSCEEE-EETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEECC
T ss_pred cceeEE-EECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCcccccc
Confidence 1 1222 2256777777754 4589999987754332 111111122222 25667777653 34
Q ss_pred eEEEEcCCCCccee--EeecccccEEEEEECCCCCEEEEeeCC-----CcEEEEEccCCCCCeeEec---cCCCceeEEE
Q psy9936 155 TVTMWSPTVQKPLA--SLLCHKAGIQSVAVNHTGTYMATSAGD-----SQLRIWDVRNLEGPLNTFR---TRTPINNLAF 224 (315)
Q Consensus 155 ~i~i~d~~~~~~~~--~~~~~~~~i~~~~~sp~g~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~---~~~~v~~~~~ 224 (315)
.+.+||+.+.+-.. .+......-..+.+ ++++++.|+.+ ..+.+||+.+. .-..+. ....-..++.
T Consensus 170 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~ 245 (306)
T 3ii7_A 170 SCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLN--EWKMVSPMPWKGVTVKCAA 245 (306)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTT--EEEECCCCSCCBSCCEEEE
T ss_pred eEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCC--cEEECCCCCCCccceeEEE
Confidence 58899988764221 11111111122222 56777777653 35889998764 222221 1111122232
Q ss_pred ccCCeEEEEc-C-----CEEEecCCCceeec
Q psy9936 225 SQRGLLATSR-G-----NIVEFLKPPEINFE 249 (315)
Q Consensus 225 s~~g~~~~~~-~-----~~i~~~~~~~~~~~ 249 (315)
..+..++.++ + +.+..+++..-.|.
T Consensus 246 ~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~ 276 (306)
T 3ii7_A 246 VGSIVYVLAGFQGVGRLGHILEYNTETDKWV 276 (306)
T ss_dssp ETTEEEEEECBCSSSBCCEEEEEETTTTEEE
T ss_pred ECCEEEEEeCcCCCeeeeeEEEEcCCCCeEE
Confidence 2233455544 1 45667777555554
No 316
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.72 E-value=0.0035 Score=51.37 Aligned_cols=181 Identities=13% Similarity=0.138 Sum_probs=97.7
Q ss_pred CCCEEEEEcCC-----CeEEEEEccCceEEEEecCCC-ceeEEEEeecCcEEEEEe-C-----CeEEEEeCCCCEEEEee
Q psy9936 21 NGRHLLLGGKR-----GHVAAFDWVRKTLACEMNVME-EVYDIKWLHLETMFAVAQ-K-----DWVYIYDNQGIELHCLK 88 (315)
Q Consensus 21 ~~~~l~~~~~d-----g~i~v~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~-~-----~~i~i~~~~~~~~~~~~ 88 (315)
++..++.|+.+ ..+.+||..+.+....-.... .....+...++.+++.|+ + ..+.+||+.......+.
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 140 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVA 140 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEEC
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecC
Confidence 55666677644 358889988877554433111 111112223666666664 3 36888998776665543
Q ss_pred cC---CceEEEEEcCCCceEEEEcCC-------CeEEEEEccCCeEEEE--eccCCCCeEEEEEcCCCCEEEEEcCC---
Q psy9936 89 VL---NKVTRMEFLPYHFLLATASEE-------GYLSWLDTSIGKIVSD--FSAKKGKLSVMTQNPYNACICLGHRN--- 153 (315)
Q Consensus 89 ~~---~~v~~~~~~~~~~~l~~~~~d-------~~i~~~d~~~~~~~~~--~~~~~~~v~~~~~~p~~~~l~~~~~d--- 153 (315)
.. ..-.+++. .++.+++.|+.+ ..+.+||+.+.+-... +.........+.+ ++.+++.|+.+
T Consensus 141 ~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~ 217 (302)
T 2xn4_A 141 PMNTRRSSVGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPL 217 (302)
T ss_dssp CCSSCCBSCEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSS
T ss_pred CCCCcccCceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCc
Confidence 22 11112222 256677776542 3588999987754332 2111111222222 56777777754
Q ss_pred --CeEEEEcCCCCccee--EeecccccEEEEEECCCCCEEEEeeCCC-----cEEEEEccCC
Q psy9936 154 --GTVTMWSPTVQKPLA--SLLCHKAGIQSVAVNHTGTYMATSAGDS-----QLRIWDVRNL 206 (315)
Q Consensus 154 --~~i~i~d~~~~~~~~--~~~~~~~~i~~~~~sp~g~~l~~~~~d~-----~i~iwd~~~~ 206 (315)
..+.+||+.+.+... .+.........+. .++.+++.|+.++ .+.+||+.+.
T Consensus 218 ~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 218 VRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp BCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred ccceEEEEeCCCCCEeeCCCCCCccccCeEEE--ECCEEEEECCcCCCcccccEEEEcCCCC
Confidence 368999998764321 1111111111222 2677777777654 4888888764
No 317
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.72 E-value=0.0043 Score=51.00 Aligned_cols=182 Identities=9% Similarity=0.037 Sum_probs=98.9
Q ss_pred cCCCCEEEEEcCC----CeEEEEEccCceEEEEecCCC-ceeEEEEeecCcEEEEEeC----------CeEEEEeCCCCE
Q psy9936 19 TKNGRHLLLGGKR----GHVAAFDWVRKTLACEMNVME-EVYDIKWLHLETMFAVAQK----------DWVYIYDNQGIE 83 (315)
Q Consensus 19 s~~~~~l~~~~~d----g~i~v~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~----------~~i~i~~~~~~~ 83 (315)
.-++..++.|+.+ ..+.+||..+.+....-.... .........++.+++.|+. +.+.+||+....
T Consensus 22 ~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 22 KVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 3456677777642 368899998887654322111 1111122236666665532 468899997776
Q ss_pred EEEeecC----CceEEEEEcCCCceEEEEcCC-----CeEEEEEccCCeEEEE--eccCCCCeEEEEEcCCCCEEEEEcC
Q psy9936 84 LHCLKVL----NKVTRMEFLPYHFLLATASEE-----GYLSWLDTSIGKIVSD--FSAKKGKLSVMTQNPYNACICLGHR 152 (315)
Q Consensus 84 ~~~~~~~----~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~--~~~~~~~v~~~~~~p~~~~l~~~~~ 152 (315)
...+... .....+.+ ++.+++.|+.+ ..+.+||+.+.+-... +.........+.+ ++.+++.|+.
T Consensus 102 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~ 177 (308)
T 1zgk_A 102 WSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGF 177 (308)
T ss_dssp EEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCB
T ss_pred EeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCC
Confidence 6554322 11122222 56777777643 3588999887654322 1111111222333 5677777765
Q ss_pred C-----CeEEEEcCCCCcce--eEeecccccEEEEEECCCCCEEEEeeCC-----CcEEEEEccCC
Q psy9936 153 N-----GTVTMWSPTVQKPL--ASLLCHKAGIQSVAVNHTGTYMATSAGD-----SQLRIWDVRNL 206 (315)
Q Consensus 153 d-----~~i~i~d~~~~~~~--~~~~~~~~~i~~~~~sp~g~~l~~~~~d-----~~i~iwd~~~~ 206 (315)
+ ..+.+||+.+.+-. ..+.........+.+ ++.+++.|+.+ ..+.+||+.+.
T Consensus 178 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 178 DGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp CSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCC
Confidence 4 46889998876422 112111112222333 67777777654 45889998764
No 318
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.69 E-value=0.0035 Score=53.36 Aligned_cols=139 Identities=9% Similarity=0.209 Sum_probs=94.0
Q ss_pred cCCCCEEEEEcCCCeEEEEEccCceEEEEecCC-----CceeEEEEeecCcEEEEEeCCeEEEEeCC-CC----------
Q psy9936 19 TKNGRHLLLGGKRGHVAAFDWVRKTLACEMNVM-----EEVYDIKWLHLETMFAVAQKDWVYIYDNQ-GI---------- 82 (315)
Q Consensus 19 s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~~~i~i~~~~-~~---------- 82 (315)
+.+|..++++. ++.||.-++......+.+... ..+..+..+|+|.+||..++..|.|..+. +.
T Consensus 29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHH
T ss_pred EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCccccccc
Confidence 44555555543 456777776643333333322 25788999999999999999999998873 21
Q ss_pred --EEEEee-------cCCceEEEEEcCC---CceEEEEcCCCeEEEEEccCC--eEEEEec---------cCCCCeEEEE
Q psy9936 83 --ELHCLK-------VLNKVTRMEFLPY---HFLLATASEEGYLSWLDTSIG--KIVSDFS---------AKKGKLSVMT 139 (315)
Q Consensus 83 --~~~~~~-------~~~~v~~~~~~~~---~~~l~~~~~d~~i~~~d~~~~--~~~~~~~---------~~~~~v~~~~ 139 (315)
....+. ...+|..+.|+|- +..|++-..|+.|++||+... ++. .+. .....|.+++
T Consensus 108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~ 186 (452)
T 3pbp_A 108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLE 186 (452)
T ss_dssp TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEE
T ss_pred ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEE
Confidence 111222 1367999999996 468999999999999999752 222 222 2225688999
Q ss_pred EcCCCCEEEEE--cCCCeEEEE
Q psy9936 140 QNPYNACICLG--HRNGTVTMW 159 (315)
Q Consensus 140 ~~p~~~~l~~~--~~d~~i~i~ 159 (315)
|.+++-.|+.. ...|.|.-.
T Consensus 187 Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 187 FSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ECTTSSCEEEEECTTSCEEEEE
T ss_pred EcCCCcEEEEEecCCCCCEEEE
Confidence 99988766664 477887655
No 319
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.68 E-value=0.0038 Score=51.27 Aligned_cols=173 Identities=8% Similarity=-0.033 Sum_probs=101.5
Q ss_pred EcCCCCEEEEEc--CCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEe--C-------------CeEEEEeCC
Q psy9936 18 YTKNGRHLLLGG--KRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQ--K-------------DWVYIYDNQ 80 (315)
Q Consensus 18 ~s~~~~~l~~~~--~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~-------------~~i~i~~~~ 80 (315)
|+++|..|+... .++.|+..+.+.......... .+--+++++.+|..+. + ..|+..+++
T Consensus 21 ~~~~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~----~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~d 96 (302)
T 3s25_A 21 FCESDGEVFFSNTNDNGRLYAMNIDGSNIHKLSND----TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRN 96 (302)
T ss_dssp EEEETTEEEEEEGGGTTEEEEEETTSCSCEEEEEE----EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETT
T ss_pred EEEeCCEEEEEeCCCCceEEEEcCCCCCCEEccCC----ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCC
Confidence 345677666553 246677777655443322221 1334578888877664 2 357777887
Q ss_pred CCEEEEeecCCceEEEEEcCCCceEEEEc----CCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcC-CCe
Q psy9936 81 GIELHCLKVLNKVTRMEFLPYHFLLATAS----EEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHR-NGT 155 (315)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~-d~~ 155 (315)
+.....+.... +..|+++++.|+-.. ....|...++.. .....+..+.. ..++|+++.|+..+. ...
T Consensus 97 g~~~~~l~~~~---~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dG-s~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~ 168 (302)
T 3s25_A 97 GHGSTVLDPDP---CIYASLIGNYIYYLHYDTQTATSLYRIRIDG-EEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQ 168 (302)
T ss_dssp SCCCEEEECSC---EEEEEEETTEEEEEEESSSSCEEEEEEETTS-CCCEEEESSCC----CCSEEETTEEEEECTTTCC
T ss_pred CCcceEeecCC---ccEEEEeCCEEEEEeecCCCCceEEEEECCC-CCeEEEeCCCc----eEeeEECCEEEEEeCCCce
Confidence 76544444332 236778888888765 344566666653 33344443332 456788887776654 678
Q ss_pred EEEEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCC--cEEEEEccCC
Q psy9936 156 VTMWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDS--QLRIWDVRNL 206 (315)
Q Consensus 156 i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~--~i~iwd~~~~ 206 (315)
|.+.++..+.....+. +... ..++|++.+|+-....+ .|..-++...
T Consensus 169 Iy~~~l~g~~~~~l~~---~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~ 217 (302)
T 3s25_A 169 LYRYDTASQSEALFYD---CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNP 217 (302)
T ss_dssp EEEEETTTTEEEEEEC---SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSC
T ss_pred EEEEECCCCCEEEEeC---CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCC
Confidence 8888887664333232 2222 23569999888776543 4666666654
No 320
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.61 E-value=0.023 Score=47.74 Aligned_cols=140 Identities=9% Similarity=0.011 Sum_probs=83.8
Q ss_pred CceeEEEEeecCcEEEEEeCCeEEEEeCCCC-EEEEee----cCCceEEEEEcCC---CceEEEEcC----C----CeEE
Q psy9936 52 EEVYDIKWLHLETMFAVAQKDWVYIYDNQGI-ELHCLK----VLNKVTRMEFLPY---HFLLATASE----E----GYLS 115 (315)
Q Consensus 52 ~~v~~~~~~~~~~~l~~~~~~~i~i~~~~~~-~~~~~~----~~~~v~~~~~~~~---~~~l~~~~~----d----~~i~ 115 (315)
.....++|.|+|+++++-.++.|++++.++. .+..+. .......++++|+ +..|+++.. + ..|.
T Consensus 29 ~~P~~ia~~pdG~l~V~e~~g~I~~~d~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~ 108 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTERPGRLVLISPSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVI 108 (354)
T ss_dssp SCEEEEEEEETTEEEEEETTTEEEEECSSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEE
T ss_pred CCCeEEEEcCCCeEEEEeCCCEEEEEeCCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEE
Confidence 4578899999999888877899999986554 111111 1256889999997 444444432 3 5688
Q ss_pred EEEccCC-------eEE-EEecc-CCCCeEEEEEcCCCCEEEEEcC-------------CCeEEEEcCCCCc-------c
Q psy9936 116 WLDTSIG-------KIV-SDFSA-KKGKLSVMTQNPYNACICLGHR-------------NGTVTMWSPTVQK-------P 166 (315)
Q Consensus 116 ~~d~~~~-------~~~-~~~~~-~~~~v~~~~~~p~~~~l~~~~~-------------d~~i~i~d~~~~~-------~ 166 (315)
.|+.... +.+ ..+.. .......++|.|||.++++.+. .|.|.-++....- .
T Consensus 109 r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~ 188 (354)
T 3a9g_A 109 RGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPN 188 (354)
T ss_dssp EEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTT
T ss_pred EEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCC
Confidence 8887643 111 11221 1112467999999986666432 2566666654220 0
Q ss_pred eeEe-ecccccEEEEEECC-CCCEEEEe
Q psy9936 167 LASL-LCHKAGIQSVAVNH-TGTYMATS 192 (315)
Q Consensus 167 ~~~~-~~~~~~i~~~~~sp-~g~~l~~~ 192 (315)
...+ .++.. ...++|+| +|.++++-
T Consensus 189 ~~i~a~G~rn-p~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 189 SPIWSYGHRN-PQGIDWHRASGVMVATE 215 (354)
T ss_dssp CCEEEECCSC-CCEEEECTTTCCEEEEE
T ss_pred CcEEEEccCC-cceEEEeCCCCCEEEEe
Confidence 1111 23433 46899999 67755554
No 321
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.61 E-value=0.046 Score=51.00 Aligned_cols=216 Identities=15% Similarity=0.178 Sum_probs=129.1
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec-CCCceeEEEEeecCcEEEEEeCCeEEEEeCCCCEEEEee
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN-VMEEVYDIKWLHLETMFAVAQKDWVYIYDNQGIELHCLK 88 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~~~~~~~~~~ 88 (315)
...|.++....+| .|.+|+.+| +..||..+.+...... ....|.++.. .++.+.++ ..+-+..++..+.....+.
T Consensus 62 ~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g~lWig-t~~Gl~~~~~~~~~~~~~~ 137 (758)
T 3ott_A 62 NTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGDTLWLG-ALNGLYTYQLQSRKLTSFD 137 (758)
T ss_dssp SSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETTEEEEE-ETTEEEEEETTTCCEEEEC
T ss_pred CceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCCcEEEE-cCCcceeEeCCCCeEEEec
Confidence 3568888777776 555666665 8899988765432111 1234666643 46665554 4447888998665554441
Q ss_pred ------cCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEe-ccC----CCCeEEEEEcCCCCEEEEEcCCCeEE
Q psy9936 89 ------VLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDF-SAK----KGKLSVMTQNPYNACICLGHRNGTVT 157 (315)
Q Consensus 89 ------~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~-~~~----~~~v~~~~~~p~~~~l~~~~~d~~i~ 157 (315)
....|.++....++.+.+ ++.+ -+..||..+++..... ... ...|.++...+++..|..|.. +-+.
T Consensus 138 ~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~ 214 (758)
T 3ott_A 138 TRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLF 214 (758)
T ss_dssp HHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEE
T ss_pred cCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCe
Confidence 124678888777776554 4444 5888888766533211 111 224788888777765555553 4688
Q ss_pred EEcCCCCcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEecc---------CCCceeEEEccCC
Q psy9936 158 MWSPTVQKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRT---------RTPINNLAFSQRG 228 (315)
Q Consensus 158 i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~---------~~~v~~~~~s~~g 228 (315)
.+|..+++...........|.++...++|.+.+. +.+ -+.+++..+. . +..+.. ...|.++..+.+|
T Consensus 215 ~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWig-T~~-Gl~~~~~~~~-~-~~~~~~~~~~~~~l~~~~i~~i~~D~~g 290 (758)
T 3ott_A 215 QYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAG-TDN-GLYVYHNDTT-P-LQHIIHDSRNIQSLTNNIIWNIFADQEH 290 (758)
T ss_dssp EEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEE-ETT-EEEEECCTTS-C-CEEECCCTTCTTSCSCSCEEEEEECTTC
T ss_pred EEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEE-eCC-ceeEEecCCC-c-EEEEEcCCCCcCcCCcCeEEEEEEcCCC
Confidence 8998766432211112346888888888876544 344 4788887664 2 222221 1247888888887
Q ss_pred -eEEEEcCC
Q psy9936 229 -LLATSRGN 236 (315)
Q Consensus 229 -~~~~~~~~ 236 (315)
+.+++..|
T Consensus 291 ~lWiGT~~G 299 (758)
T 3ott_A 291 NIWLGTDYG 299 (758)
T ss_dssp CEEEEESSS
T ss_pred CEEEEeCCc
Confidence 56666555
No 322
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.61 E-value=0.006 Score=50.03 Aligned_cols=181 Identities=8% Similarity=0.082 Sum_probs=99.2
Q ss_pred CCCEEEEEcCC----CeEEEEEccCceEEEEecCCC-ceeEEEEeecCcEEEEEe-C------CeEEEEeCCCCEEEEee
Q psy9936 21 NGRHLLLGGKR----GHVAAFDWVRKTLACEMNVME-EVYDIKWLHLETMFAVAQ-K------DWVYIYDNQGIELHCLK 88 (315)
Q Consensus 21 ~~~~l~~~~~d----g~i~v~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~-~------~~i~i~~~~~~~~~~~~ 88 (315)
++..++.|+.+ ..+.+||..+.+....-.... .....+..-++++++.|+ + ..+.+||+.......+.
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~ 134 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKP 134 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEEC
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCC
Confidence 56666777644 568899998887654433221 111222233677766664 2 46899999777665543
Q ss_pred cC---CceEEEEEcCCCceEEEEcC---------CCeEEEEEccCCeEEEE--eccCCCCeEEEEEcCCCCEEEEEcCC-
Q psy9936 89 VL---NKVTRMEFLPYHFLLATASE---------EGYLSWLDTSIGKIVSD--FSAKKGKLSVMTQNPYNACICLGHRN- 153 (315)
Q Consensus 89 ~~---~~v~~~~~~~~~~~l~~~~~---------d~~i~~~d~~~~~~~~~--~~~~~~~v~~~~~~p~~~~l~~~~~d- 153 (315)
.. ..-.++.. .++.+++.|+. -..+.+||+.+.+-... +.........+.+ ++++++.|+.+
T Consensus 135 ~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 211 (306)
T 3ii7_A 135 SMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNG 211 (306)
T ss_dssp CCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEET
T ss_pred CCcCCcceeEEEE-ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCC
Confidence 22 11112222 25666776653 34588999987754332 1111111222222 56677777653
Q ss_pred ----CeEEEEcCCCCcc--eeEeecccccEEEEEECCCCCEEEEeeCC-----CcEEEEEccCC
Q psy9936 154 ----GTVTMWSPTVQKP--LASLLCHKAGIQSVAVNHTGTYMATSAGD-----SQLRIWDVRNL 206 (315)
Q Consensus 154 ----~~i~i~d~~~~~~--~~~~~~~~~~i~~~~~sp~g~~l~~~~~d-----~~i~iwd~~~~ 206 (315)
..+.+||+.+.+- +..+.........+.+ ++.+++.|+.+ ..+.+||+.+.
T Consensus 212 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 212 LGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp TEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred CCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 3688999887642 2222211122223333 67777777754 35788888764
No 323
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.57 E-value=0.016 Score=44.78 Aligned_cols=139 Identities=12% Similarity=0.021 Sum_probs=83.9
Q ss_pred CceeEEEEeecCcEEEEEeCCeEEEEeCCC-------CEEEEeecC--CceEEEEEcCCCceEEEEcCCCeEEEEEccCC
Q psy9936 52 EEVYDIKWLHLETMFAVAQKDWVYIYDNQG-------IELHCLKVL--NKVTRMEFLPYHFLLATASEEGYLSWLDTSIG 122 (315)
Q Consensus 52 ~~v~~~~~~~~~~~l~~~~~~~i~i~~~~~-------~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 122 (315)
..+.+++|+|+|.+.++ .+|.++-.+..+ ..-..+... ....++.|.|+|.+.++ .||.|+-++..+.
T Consensus 41 ~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~ 117 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQS 117 (236)
T ss_dssp TTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred ccceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence 46789999999998888 888877777632 111222211 23578999999987777 5698887775331
Q ss_pred eE-------EEEeccCCCCeEEEEEcCCCCEEEEEcCCCeEEEEcCCCCcc-----eeEee--cccccEEEEEECCCCCE
Q psy9936 123 KI-------VSDFSAKKGKLSVMTQNPYNACICLGHRNGTVTMWSPTVQKP-----LASLL--CHKAGIQSVAVNHTGTY 188 (315)
Q Consensus 123 ~~-------~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~-----~~~~~--~~~~~i~~~~~sp~g~~ 188 (315)
.. ...-...-..+..|.+.|+|.+.++. |+.+.-....++.. ..+.- ..-..-..+.|+|+|.+
T Consensus 118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l 195 (236)
T 1tl2_A 118 DTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTL 195 (236)
T ss_dssp TTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCE
T ss_pred CCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcE
Confidence 10 11111112357899999999877776 77754433322210 11111 12223445779999987
Q ss_pred EEEeeCCCc
Q psy9936 189 MATSAGDSQ 197 (315)
Q Consensus 189 l~~~~~d~~ 197 (315)
.++. ++.
T Consensus 196 ~~v~--~g~ 202 (236)
T 1tl2_A 196 FGVQ--GGK 202 (236)
T ss_dssp EEEE--TTE
T ss_pred EEEe--CCe
Confidence 7666 653
No 324
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.56 E-value=0.00044 Score=57.59 Aligned_cols=185 Identities=11% Similarity=0.057 Sum_probs=104.2
Q ss_pred CEEEEEcCCCeEEEEEccCceEEEEecCC--CceeEEEEe---ecCcEEEEE--eCCeEEEEeCCCCEEE-EeecC----
Q psy9936 23 RHLLLGGKRGHVAAFDWVRKTLACEMNVM--EEVYDIKWL---HLETMFAVA--QKDWVYIYDNQGIELH-CLKVL---- 90 (315)
Q Consensus 23 ~~l~~~~~dg~i~v~~~~~~~~~~~~~~~--~~v~~~~~~---~~~~~l~~~--~~~~i~i~~~~~~~~~-~~~~~---- 90 (315)
..+++++.||.|+-+|..+|+....+... .++....-. .++..++.. .||.|+.++..+.... .+...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 36788899999999999999998888744 232221100 133455453 5899999998544322 22211
Q ss_pred -CceEE---EEE-c----CCCceEEEEcCCCeEEEEEccCCeEEEEeccCC--CC-----eEEEEEc-----CCCCEEEE
Q psy9936 91 -NKVTR---MEF-L----PYHFLLATASEEGYLSWLDTSIGKIVSDFSAKK--GK-----LSVMTQN-----PYNACICL 149 (315)
Q Consensus 91 -~~v~~---~~~-~----~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~--~~-----v~~~~~~-----p~~~~l~~ 149 (315)
.++.. ... . ..+..+++|+.+|.+...|+.+|+.+..+.... +. ..+.... ..+..++.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i 170 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI 170 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence 22221 000 0 145678899999999999999999998876431 10 0111111 12356777
Q ss_pred EcCCCeEEEEcCCCCcceeEee-----cccc--cE-EEEEECCCCCEEEEeeCCCcEEEEEccCCCCCee
Q psy9936 150 GHRNGTVTMWSPTVQKPLASLL-----CHKA--GI-QSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLN 211 (315)
Q Consensus 150 ~~~d~~i~i~d~~~~~~~~~~~-----~~~~--~i-~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~ 211 (315)
+..+..+.+.+ ++++ +..+. .+.. ++ .+-..+.|+.+ +.++.||.|.-+|..++ ..+.
T Consensus 171 g~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G-~~~W 236 (339)
T 2be1_A 171 GKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFR-IARW 236 (339)
T ss_dssp EEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTC-CEEE
T ss_pred ecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCC-cEEE
Confidence 77777788777 4554 32221 0000 00 00001234555 44678888888888777 5544
No 325
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.55 E-value=0.018 Score=46.95 Aligned_cols=181 Identities=12% Similarity=0.126 Sum_probs=97.1
Q ss_pred CCCEEEEEcCC----CeEEEEEccCceEEEEecCCC-ceeEEEEeecCcEEEEEe-C-----CeEEEEeCCCCEEEEeec
Q psy9936 21 NGRHLLLGGKR----GHVAAFDWVRKTLACEMNVME-EVYDIKWLHLETMFAVAQ-K-----DWVYIYDNQGIELHCLKV 89 (315)
Q Consensus 21 ~~~~l~~~~~d----g~i~v~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~-~-----~~i~i~~~~~~~~~~~~~ 89 (315)
++..++.|+.+ ..+..||+.+.+....-.... .........++.+++.|+ + ..+.+||........+..
T Consensus 15 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~ 94 (302)
T 2xn4_A 15 PKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVAN 94 (302)
T ss_dssp CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECC
T ss_pred CCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCC
Confidence 34566666643 358899988877544322111 111112223666766664 2 468999997776655542
Q ss_pred C---CceEEEEEcCCCceEEEEcCCC-----eEEEEEccCCeEEEE--eccCCCCeEEEEEcCCCCEEEEEcCC------
Q psy9936 90 L---NKVTRMEFLPYHFLLATASEEG-----YLSWLDTSIGKIVSD--FSAKKGKLSVMTQNPYNACICLGHRN------ 153 (315)
Q Consensus 90 ~---~~v~~~~~~~~~~~l~~~~~d~-----~i~~~d~~~~~~~~~--~~~~~~~v~~~~~~p~~~~l~~~~~d------ 153 (315)
. ..-.+++. .++.+++.|+.++ .+.+||+.+.+-... +.........+.+ ++.+++.|+.+
T Consensus 95 ~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~ 171 (302)
T 2xn4_A 95 MRDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQC 171 (302)
T ss_dssp CSSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEE
T ss_pred CCccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCcc
Confidence 2 11112222 2567777776543 478899887754332 1111111222222 56677776542
Q ss_pred -CeEEEEcCCCCccee--EeecccccEEEEEECCCCCEEEEeeCCC-----cEEEEEccCC
Q psy9936 154 -GTVTMWSPTVQKPLA--SLLCHKAGIQSVAVNHTGTYMATSAGDS-----QLRIWDVRNL 206 (315)
Q Consensus 154 -~~i~i~d~~~~~~~~--~~~~~~~~i~~~~~sp~g~~l~~~~~d~-----~i~iwd~~~~ 206 (315)
..+.+||+.+.+-.. .+.........+.+ ++.+++.|+.++ .+.+||+.+.
T Consensus 172 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 230 (302)
T 2xn4_A 172 LSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTN 230 (302)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTT
T ss_pred ccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCC
Confidence 358899988764322 22211111222222 577777877643 5889998764
No 326
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.55 E-value=0.014 Score=48.10 Aligned_cols=176 Identities=9% Similarity=0.099 Sum_probs=93.4
Q ss_pred EEEEEcCCCeEEEEEccCceEEEE-ecCC-CceeEEEEeecCcEEEEEe-----C-------CeEEEEeCCCCEEEEeec
Q psy9936 24 HLLLGGKRGHVAAFDWVRKTLACE-MNVM-EEVYDIKWLHLETMFAVAQ-----K-------DWVYIYDNQGIELHCLKV 89 (315)
Q Consensus 24 ~l~~~~~dg~i~v~~~~~~~~~~~-~~~~-~~v~~~~~~~~~~~l~~~~-----~-------~~i~i~~~~~~~~~~~~~ 89 (315)
+++.|+ ..+.+||..+++.... +... ..........++.+++.|+ + ..+..||........+..
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 84 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPP 84 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCC
Confidence 445565 5699999998886431 1111 2222223334666666554 1 137888987766655432
Q ss_pred CC-c-e-EEEEEcCCCceEEEEcCC--------CeEEEEEccCCeEEEE--eccCCCCeEEEEEcCCCCEEEEEcC-C--
Q psy9936 90 LN-K-V-TRMEFLPYHFLLATASEE--------GYLSWLDTSIGKIVSD--FSAKKGKLSVMTQNPYNACICLGHR-N-- 153 (315)
Q Consensus 90 ~~-~-v-~~~~~~~~~~~l~~~~~d--------~~i~~~d~~~~~~~~~--~~~~~~~v~~~~~~p~~~~l~~~~~-d-- 153 (315)
.. + . .+++. -++.+++.|+.+ ..+.+||+.+.+-... +.........+. .++++++.|+. +
T Consensus 85 ~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~ 161 (315)
T 4asc_A 85 LPSPRCLFGLGE-ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDR 161 (315)
T ss_dssp BSSCEESCEEEE-ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTS
T ss_pred CCcchhceeEEE-ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCC
Confidence 21 1 1 11222 256677777632 3589999987753322 111111122222 35667777775 2
Q ss_pred ---CeEEEEcCCCCcce--eEeecccccEEEEEECCCCCEEEEeeCCC-----cEEEEEccCC
Q psy9936 154 ---GTVTMWSPTVQKPL--ASLLCHKAGIQSVAVNHTGTYMATSAGDS-----QLRIWDVRNL 206 (315)
Q Consensus 154 ---~~i~i~d~~~~~~~--~~~~~~~~~i~~~~~sp~g~~l~~~~~d~-----~i~iwd~~~~ 206 (315)
..+.+||+.+.+-. ..+.........+.+ ++++++.|+.++ .+.+||+.+.
T Consensus 162 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 162 KCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp CBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred cccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCC
Confidence 46899998876322 222211111122222 667777777654 4788888764
No 327
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.49 E-value=0.066 Score=49.90 Aligned_cols=221 Identities=12% Similarity=0.078 Sum_probs=127.5
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec--CCCceeEEEEeecCcEEEEEeCCeEEEEeCCCCEEEEe
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN--VMEEVYDIKWLHLETMFAVAQKDWVYIYDNQGIELHCL 87 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~~~~~~~~~ 87 (315)
+..|.++.-..+| +|-.|+.+| +..||-...+...... ....|.++.-..++.+.+.+ ++-+..||.........
T Consensus 21 ~n~V~~I~qD~~G-~lWigT~~G-L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigT-~~Gl~~yd~~~~~f~~~ 97 (758)
T 3ott_A 21 ASVVSCFLQDSEG-LIWIGSNKG-LFSYDGYSTQQHFTYGENNNTRIYCGVIIDNTYLYMGT-DNGILVYNYRADRYEQP 97 (758)
T ss_dssp CCCEEEEEECTTS-CEEEEESSC-EEEECSSCEEECSCTTSTTSSCEEEEEEETTTEEEEEE-TTEEEEEETTTTEECCC
T ss_pred cceEEEEEECCCC-CEEEEECCC-ccccCCCceEEEEccCCCCCceEEEEEEcCCCcEEEEe-CCCeEEEeCCCCEEECc
Confidence 6789999988888 455566777 6677743322111001 22457777766667655554 45588999865443221
Q ss_pred e--cCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEec----cCCCCeEEEEEcCCCCEEEEEcCCCeEEEEcC
Q psy9936 88 K--VLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFS----AKKGKLSVMTQNPYNACICLGHRNGTVTMWSP 161 (315)
Q Consensus 88 ~--~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~----~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~ 161 (315)
. ....|.++.. .++ .|..++.+ -+..||..+++...... .....|.++...++|.+.+ |+.. -+..||.
T Consensus 98 ~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~ 172 (758)
T 3ott_A 98 ETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIP 172 (758)
T ss_dssp SCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEET
T ss_pred ccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCcc
Confidence 1 1234666654 345 45556655 68889987665432211 1234588888888887555 4444 5778887
Q ss_pred CCCcceeEeec------ccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEec--cCCCceeEEEccCCe-EEE
Q psy9936 162 TVQKPLASLLC------HKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFR--TRTPINNLAFSQRGL-LAT 232 (315)
Q Consensus 162 ~~~~~~~~~~~------~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~--~~~~v~~~~~s~~g~-~~~ 232 (315)
.+++. ..+.. ....|.++...+++..|..|+. +-+..+|..+. . +..+. ....|.++...++|. +++
T Consensus 173 ~~~~~-~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~-~-~~~~~~l~~~~i~~i~~d~~g~lWig 248 (758)
T 3ott_A 173 SNGKF-EGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTG-Q-IKQTEAFHNNSIKSLALDGNGDLLAG 248 (758)
T ss_dssp TTTEE-EEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTT-E-EEEEEEEEEEEEEEEEECTTCCEEEE
T ss_pred CCCce-EEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCC-e-EEeccCCCCCeEEEEEEcCCCCEEEE
Confidence 76542 22211 1224788888777664444443 35888887764 3 22221 122488888888885 555
Q ss_pred EcCCEEEecCC
Q psy9936 233 SRGNIVEFLKP 243 (315)
Q Consensus 233 ~~~~~i~~~~~ 243 (315)
+ ++-+..+++
T Consensus 249 T-~~Gl~~~~~ 258 (758)
T 3ott_A 249 T-DNGLYVYHN 258 (758)
T ss_dssp E-TTEEEEECC
T ss_pred e-CCceeEEec
Confidence 5 445555554
No 328
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.45 E-value=0.016 Score=47.72 Aligned_cols=185 Identities=12% Similarity=0.083 Sum_probs=96.8
Q ss_pred EcCCCCEEEEEcC-----C------CeEEEEEccCceEEEEecCCCc-eeEEEEeecCcEEEEEe----C-----CeEEE
Q psy9936 18 YTKNGRHLLLGGK-----R------GHVAAFDWVRKTLACEMNVMEE-VYDIKWLHLETMFAVAQ----K-----DWVYI 76 (315)
Q Consensus 18 ~s~~~~~l~~~~~-----d------g~i~v~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~----~-----~~i~i 76 (315)
...++..++.|+. . ..+.+||..+.+....-....+ .......-++.+++.|+ + ..+.+
T Consensus 42 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~ 121 (315)
T 4asc_A 42 VTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMC 121 (315)
T ss_dssp ECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEE
T ss_pred EEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEE
Confidence 3456777777773 1 1377889888775433222221 11111222666666654 1 46899
Q ss_pred EeCCCCEEEEeecC--CceEEEEEcCCCceEEEEcC-C-----CeEEEEEccCCeEEEE--eccCCCCeEEEEEcCCCCE
Q psy9936 77 YDNQGIELHCLKVL--NKVTRMEFLPYHFLLATASE-E-----GYLSWLDTSIGKIVSD--FSAKKGKLSVMTQNPYNAC 146 (315)
Q Consensus 77 ~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~-d-----~~i~~~d~~~~~~~~~--~~~~~~~v~~~~~~p~~~~ 146 (315)
||+.......+... ......+...++++++.|+. + ..+.+||+.+.+-... +.........+.+ ++++
T Consensus 122 ~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i 199 (315)
T 4asc_A 122 YDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRI 199 (315)
T ss_dssp EETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEE
T ss_pred ECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEE
Confidence 99977665554322 11111122245667777765 2 3589999987653322 1111111222222 6677
Q ss_pred EEEEcCCC-----eEEEEcCCCCccee--EeecccccEEEEEECCCCCEEEEeeCCC--------------cEEEEEccC
Q psy9936 147 ICLGHRNG-----TVTMWSPTVQKPLA--SLLCHKAGIQSVAVNHTGTYMATSAGDS--------------QLRIWDVRN 205 (315)
Q Consensus 147 l~~~~~d~-----~i~i~d~~~~~~~~--~~~~~~~~i~~~~~sp~g~~l~~~~~d~--------------~i~iwd~~~ 205 (315)
++.|+.++ .+.+||+.+.+-.. .+.........+.+ ++++++.|+.++ .+.+||+.+
T Consensus 200 yv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~ 277 (315)
T 4asc_A 200 IVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSL--VGTLYAIGGFATLETESGELVPTELNDIWRYNEEE 277 (315)
T ss_dssp EEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTT
T ss_pred EEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEE--CCEEEEECCccccCcCCccccccccCcEEEecCCC
Confidence 77777644 58899988764322 11111111222222 567777776532 366777765
Q ss_pred C
Q psy9936 206 L 206 (315)
Q Consensus 206 ~ 206 (315)
.
T Consensus 278 ~ 278 (315)
T 4asc_A 278 K 278 (315)
T ss_dssp T
T ss_pred C
Confidence 3
No 329
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.44 E-value=0.0075 Score=49.56 Aligned_cols=180 Identities=11% Similarity=0.058 Sum_probs=97.1
Q ss_pred CCCEEEEEcC----C-----CeEEEEEccCceEEEEecCC-CceeEEEEeecCcEEEEEe------CCeEEEEeCCCCEE
Q psy9936 21 NGRHLLLGGK----R-----GHVAAFDWVRKTLACEMNVM-EEVYDIKWLHLETMFAVAQ------KDWVYIYDNQGIEL 84 (315)
Q Consensus 21 ~~~~l~~~~~----d-----g~i~v~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~------~~~i~i~~~~~~~~ 84 (315)
++..++.|+. + ..+.+||..+.+....-... .........-++++++.|+ -..+.+||+.....
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 149 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEW 149 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEE
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeE
Confidence 5666666665 2 35888898887654432211 1111112223677777654 24688999977666
Q ss_pred EEeecC----CceEEEEEcCCCceEEEEcCC-----CeEEEEEccCCeEEEE--eccCCCCeEEEEEcCCCCEEEEEcCC
Q psy9936 85 HCLKVL----NKVTRMEFLPYHFLLATASEE-----GYLSWLDTSIGKIVSD--FSAKKGKLSVMTQNPYNACICLGHRN 153 (315)
Q Consensus 85 ~~~~~~----~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~--~~~~~~~v~~~~~~p~~~~l~~~~~d 153 (315)
..+... .....+.+ ++.+++.|+.+ ..+.+||+.+.+-... +.........+.+ ++.+++.|+.+
T Consensus 150 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 225 (308)
T 1zgk_A 150 HLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYD 225 (308)
T ss_dssp EECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBC
T ss_pred eECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCC
Confidence 554322 11122222 56777777654 4589999887654322 1111111222333 56777777654
Q ss_pred -----CeEEEEcCCCCccee--EeecccccEEEEEECCCCCEEEEeeCCC-----cEEEEEccCC
Q psy9936 154 -----GTVTMWSPTVQKPLA--SLLCHKAGIQSVAVNHTGTYMATSAGDS-----QLRIWDVRNL 206 (315)
Q Consensus 154 -----~~i~i~d~~~~~~~~--~~~~~~~~i~~~~~sp~g~~l~~~~~d~-----~i~iwd~~~~ 206 (315)
..+.+||+.+.+-.. .+.........+.+ ++++++.|+.++ .+.+||+.+.
T Consensus 226 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 226 GQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp SSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred CCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCC
Confidence 468999988764321 12111111122222 567777777543 4778887764
No 330
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.44 E-value=0.1 Score=50.95 Aligned_cols=205 Identities=11% Similarity=0.111 Sum_probs=118.5
Q ss_pred eEEEEEccCceEEEEec--CCCceeEEEEee---c-CcEEEEEe-----------CCeEEEEeCCCCEEEEee---cCCc
Q psy9936 33 HVAAFDWVRKTLACEMN--VMEEVYDIKWLH---L-ETMFAVAQ-----------KDWVYIYDNQGIELHCLK---VLNK 92 (315)
Q Consensus 33 ~i~v~~~~~~~~~~~~~--~~~~v~~~~~~~---~-~~~l~~~~-----------~~~i~i~~~~~~~~~~~~---~~~~ 92 (315)
.|++.|..+.+.+..+. ..+.+.+++... + ..++++|. .|.|++|++.+..+..+. ..++
T Consensus 808 ~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~ 887 (1158)
T 3ei3_A 808 NLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 887 (1158)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSC
T ss_pred EEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCc
Confidence 46677776666655544 445566655332 2 46777663 267999998655554432 3478
Q ss_pred eEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEE-EeccCCCCeEEEEEcCCCCEEEEEcCCCeEEEEc--CCCCcceeE
Q psy9936 93 VTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVS-DFSAKKGKLSVMTQNPYNACICLGHRNGTVTMWS--PTVQKPLAS 169 (315)
Q Consensus 93 v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~-~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d--~~~~~~~~~ 169 (315)
+++++-- +|.+++.. ..++++|++...+.+. ...... .+..+.....++++++|..-..|.++. ...++ +..
T Consensus 888 v~al~~~-~g~Lla~i--g~~l~vy~l~~~~~L~~~~~~~~-~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~-L~~ 962 (1158)
T 3ei3_A 888 VYSMVEF-NGKLLASI--NSTVRLYEWTTEKELRTECNHYN-NIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGN-FEE 962 (1158)
T ss_dssp EEEEEEE-TTEEEEEE--TTEEEEEEECTTSCEEEEEEECC-CSCEEEEEEETTEEEEEESSBCEEEEEEETTTTE-EEE
T ss_pred CEEEeee-CCEEEEEc--CCEEEEEECCCCceEEEEeeccc-cEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCe-EEE
Confidence 8887644 35444433 3689999997654333 111121 133333333577888988777776654 33332 223
Q ss_pred ee--cccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCC-------CC--eeEeccCCCceeEE---EccCC-------
Q psy9936 170 LL--CHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLE-------GP--LNTFRTRTPINNLA---FSQRG------- 228 (315)
Q Consensus 170 ~~--~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~-------~~--~~~~~~~~~v~~~~---~s~~g------- 228 (315)
+. .+..+++++.+-.++ .++.+..+|.+.+....... +. ...+..+..|+++. +.+.+
T Consensus 963 ~a~D~~~~~vta~~~ld~~-t~l~aD~~gNl~vl~~~~~~~~~~~~~~L~~~~~fhlG~~vt~~~~~sl~~~~~~~~~~~ 1041 (1158)
T 3ei3_A 963 IARDFNPNWMSAVEILDDD-NFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTP 1041 (1158)
T ss_dssp EEECCSCBCEEEEEEEETT-EEEEEETTSEEEEEEECTTCCSTTGGGBEEEEEEEECSSCEEEEEECCSCCC-------C
T ss_pred EEeecccccEEEEEEEccC-cEEEEcCCCcEEEEecCCCCCCccccceeeeEEEEeCCCcEeeEEeeeeecCCCcccccc
Confidence 32 345688888886554 67778999999998765420 11 12233344566664 22221
Q ss_pred ----eEEEEcCCEEEecCC
Q psy9936 229 ----LLATSRGNIVEFLKP 243 (315)
Q Consensus 229 ----~~~~~~~~~i~~~~~ 243 (315)
.+.++.+|.|-..-|
T Consensus 1042 ~~~~il~~T~~GsIg~l~p 1060 (1158)
T 3ei3_A 1042 TQGSVLFGTVNGMIGLVTS 1060 (1158)
T ss_dssp EEEEEEEEETTSCEEEEEE
T ss_pred ccceEEEEecCCEEEEEEE
Confidence 466777888875444
No 331
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.43 E-value=0.0028 Score=48.91 Aligned_cols=140 Identities=9% Similarity=0.003 Sum_probs=83.5
Q ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceE------EEEecC--CCceeEEEEeecCcEEEEEeCCeEEEEeC--C
Q psy9936 11 FGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTL------ACEMNV--MEEVYDIKWLHLETMFAVAQKDWVYIYDN--Q 80 (315)
Q Consensus 11 ~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~------~~~~~~--~~~v~~~~~~~~~~~l~~~~~~~i~i~~~--~ 80 (315)
..+..++|+|+|.+.++ .+|.++-.+..+... ...+.. -....++.|.|+|.+.++ +||.|+-++. +
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~pP~~ 117 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASPPQS 117 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEESCCCS
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe-CCCEEEEeCCCcC
Confidence 35679999999987776 677776666544211 111210 011477889999999988 8899988876 2
Q ss_pred CCEE-----EEeec--CCceEEEEEcCCCceEEEEcCCCeEEEEEccCCe------EEEEec-cCCCCeEEEEEcCCCCE
Q psy9936 81 GIEL-----HCLKV--LNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGK------IVSDFS-AKKGKLSVMTQNPYNAC 146 (315)
Q Consensus 81 ~~~~-----~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~------~~~~~~-~~~~~v~~~~~~p~~~~ 146 (315)
+..- ..+.. -..+..+.+.|+|.+.++. |+.++-....++. ....+. .......-+.|.|++.+
T Consensus 118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l 195 (236)
T 1tl2_A 118 DTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTL 195 (236)
T ss_dssp TTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCE
T ss_pred CCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcE
Confidence 2110 11222 1578999999999877666 7775433222111 011111 22223455678999887
Q ss_pred EEEEcCCCeEE
Q psy9936 147 ICLGHRNGTVT 157 (315)
Q Consensus 147 l~~~~~d~~i~ 157 (315)
+++. ++.+.
T Consensus 196 ~~v~--~g~~Y 204 (236)
T 1tl2_A 196 FGVQ--GGKFY 204 (236)
T ss_dssp EEEE--TTEEE
T ss_pred EEEe--CCeEE
Confidence 7666 66443
No 332
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.39 E-value=0.0074 Score=59.00 Aligned_cols=220 Identities=10% Similarity=0.112 Sum_probs=134.4
Q ss_pred EEEcCCCCEEEEEcCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEeCCeEEEEeCCCC--EEEEeec----
Q psy9936 16 MNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQKDWVYIYDNQGI--ELHCLKV---- 89 (315)
Q Consensus 16 ~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~~~~--~~~~~~~---- 89 (315)
.-.+|..+.||.-. ..++.|+|+++...+..+...++|.-=.|.. .+.|+..++..|+-|++.+. +...+..
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfWkWis-~~~l~lVT~~aVyHW~~~~~s~P~k~fdR~~~L 148 (1630)
T 1xi4_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWIS-LNTVALVTDNAVYHWSMEGESQPVKMFDRHSSL 148 (1630)
T ss_pred hccCCCcceEEEec-CCeEEEeehHHhhhhcccccCCCceEEEecC-CCeeEEEcCCeEEEeccCCCCccHHHHhcchhc
Confidence 34678777777654 6789999999988888887777777667764 45677777889999999652 2222221
Q ss_pred -CCceEEEEEcCCCceEEEEc-------CCCeEEEEEccCCeEEEEeccCCCCeEEEEEc--CC-CCEEEEEcC---CCe
Q psy9936 90 -LNKVTRMEFLPYHFLLATAS-------EEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQN--PY-NACICLGHR---NGT 155 (315)
Q Consensus 90 -~~~v~~~~~~~~~~~l~~~~-------~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~--p~-~~~l~~~~~---d~~ 155 (315)
...|.....+++.++++..+ ..|.+.+|.... +..+.+.+|.+....+... +. ...+..+.. .+.
T Consensus 149 ~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er-~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~k 227 (1630)
T 1xi4_A 149 AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGK 227 (1630)
T ss_pred ccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccc-ccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCce
Confidence 24566677788888776543 357889998764 3445567776655444332 11 123333222 268
Q ss_pred EEEEcCCCC---ccee------Eeec---ccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCC-CceeE
Q psy9936 156 VTMWSPTVQ---KPLA------SLLC---HKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRT-PINNL 222 (315)
Q Consensus 156 i~i~d~~~~---~~~~------~~~~---~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~ 222 (315)
+.|.++... .+.. .+-. ...-...+..|+....+..-+.-|.|+++|+.++ .++..-+... +|...
T Consensus 228 Lhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~-~~i~~~ris~~~iF~~ 306 (1630)
T 1xi4_A 228 LHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETG-TCIYMNRISGETIFVT 306 (1630)
T ss_pred EEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccc-hhhhhccccCCceEEe
Confidence 888887542 1110 0101 1122346777777777888889999999999998 7666544333 33222
Q ss_pred EEc-c-CCeEEEEcCCEEE
Q psy9936 223 AFS-Q-RGLLATSRGNIVE 239 (315)
Q Consensus 223 ~~s-~-~g~~~~~~~~~i~ 239 (315)
+-+ + .|.+.+...|.|-
T Consensus 307 ~~~~~~~g~~~vnr~G~vl 325 (1630)
T 1xi4_A 307 APHEATAGIIGVNRKGQVL 325 (1630)
T ss_pred ccCCCCCceEEEcCCceEE
Confidence 222 2 2344445555544
No 333
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.38 E-value=0.031 Score=45.99 Aligned_cols=183 Identities=13% Similarity=0.135 Sum_probs=95.3
Q ss_pred EcCCCCEEEEEcC----CC-------eEEEEEccCceEEEEecCCCc--eeEEEEeecCcEEEEEe-C-------CeEEE
Q psy9936 18 YTKNGRHLLLGGK----RG-------HVAAFDWVRKTLACEMNVMEE--VYDIKWLHLETMFAVAQ-K-------DWVYI 76 (315)
Q Consensus 18 ~s~~~~~l~~~~~----dg-------~i~v~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~-~-------~~i~i 76 (315)
...++..++.|+. ++ .+.+||..+.+....-....+ -.+++ .-++++++.|+ + ..+.+
T Consensus 53 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~ 131 (318)
T 2woz_A 53 VTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLG-EVDDKIYVVAGKDLQTEASLDSVLC 131 (318)
T ss_dssp ECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEE-EETTEEEEEEEEBTTTCCEEEEEEE
T ss_pred EEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceE-EECCEEEEEcCccCCCCcccceEEE
Confidence 3456777777773 11 277888887776543221111 11222 22566666654 2 35888
Q ss_pred EeCCCCEEEEeecC-Cce--EEEEEcCCCceEEEEcC------CCeEEEEEccCCeEEEE--eccCCCCeEEEEEcCCCC
Q psy9936 77 YDNQGIELHCLKVL-NKV--TRMEFLPYHFLLATASE------EGYLSWLDTSIGKIVSD--FSAKKGKLSVMTQNPYNA 145 (315)
Q Consensus 77 ~~~~~~~~~~~~~~-~~v--~~~~~~~~~~~l~~~~~------d~~i~~~d~~~~~~~~~--~~~~~~~v~~~~~~p~~~ 145 (315)
||+.......+... .+. .+++ ..++.+++.|+. -..+.+||+.+.+-... +.........+.+ ++.
T Consensus 132 yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~ 208 (318)
T 2woz_A 132 YDPVAAKWSEVKNLPIKVYGHNVI-SHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGK 208 (318)
T ss_dssp EETTTTEEEEECCCSSCEESCEEE-EETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTE
T ss_pred EeCCCCCEeECCCCCCcccccEEE-EECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCE
Confidence 99977766554322 111 1122 245677777764 23589999987754332 1111111222222 567
Q ss_pred EEEEEcCC-----CeEEEEcCCCCcce--eEeecccccEEEEEECCCCCEEEEeeCC--------------CcEEEEEcc
Q psy9936 146 CICLGHRN-----GTVTMWSPTVQKPL--ASLLCHKAGIQSVAVNHTGTYMATSAGD--------------SQLRIWDVR 204 (315)
Q Consensus 146 ~l~~~~~d-----~~i~i~d~~~~~~~--~~~~~~~~~i~~~~~sp~g~~l~~~~~d--------------~~i~iwd~~ 204 (315)
+++.|+.+ ..+.+||+.+.+-. ..+.........+. .++.+++.|+.+ ..+.+||+.
T Consensus 209 iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~ 286 (318)
T 2woz_A 209 IVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVS--LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDD 286 (318)
T ss_dssp EEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEE--ETTEEEEECCBCCBC----CCBCCBCCCEEEEETT
T ss_pred EEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEE--ECCEEEEECCeeccCCCCceeccceeeeEEEEeCC
Confidence 77777643 35788998876422 12221111112222 356677777653 246677776
Q ss_pred CC
Q psy9936 205 NL 206 (315)
Q Consensus 205 ~~ 206 (315)
+.
T Consensus 287 ~~ 288 (318)
T 2woz_A 287 KK 288 (318)
T ss_dssp TT
T ss_pred CC
Confidence 53
No 334
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.37 E-value=0.035 Score=48.38 Aligned_cols=100 Identities=6% Similarity=0.024 Sum_probs=60.8
Q ss_pred CceeEEEEeecCcEEEEEeCC-eEEEEeCCCCEEEEee----------cCCceEEEEEcCC---CceEEEEcC-------
Q psy9936 52 EEVYDIKWLHLETMFAVAQKD-WVYIYDNQGIELHCLK----------VLNKVTRMEFLPY---HFLLATASE------- 110 (315)
Q Consensus 52 ~~v~~~~~~~~~~~l~~~~~~-~i~i~~~~~~~~~~~~----------~~~~v~~~~~~~~---~~~l~~~~~------- 110 (315)
.....++|.|+|+++++...+ .|++++..+.....+. .......|+|+|+ +..|+.+..
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 456799999999988888765 7988886432222221 1245679999995 444444432
Q ss_pred ------CCeEEEEEccCC-------eEEE-Eecc-CCCCeEEEEEcCCCCEEEEEc
Q psy9936 111 ------EGYLSWLDTSIG-------KIVS-DFSA-KKGKLSVMTQNPYNACICLGH 151 (315)
Q Consensus 111 ------d~~i~~~d~~~~-------~~~~-~~~~-~~~~v~~~~~~p~~~~l~~~~ 151 (315)
...|.-|++..+ +.+. .+.. .......|+|.|||.++++.+
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 235666665432 1111 1221 123468899999998766644
No 335
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.23 E-value=0.048 Score=45.54 Aligned_cols=145 Identities=14% Similarity=0.168 Sum_probs=83.5
Q ss_pred CCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeE--EEEec----cCCCCeEEEEEcCC---CCEEEEE---cCCCeEE
Q psy9936 90 LNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKI--VSDFS----AKKGKLSVMTQNPY---NACICLG---HRNGTVT 157 (315)
Q Consensus 90 ~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~--~~~~~----~~~~~v~~~~~~p~---~~~l~~~---~~d~~i~ 157 (315)
....+.++|.|+|.++++--..|.|++++...++. +..+. ........|+++|+ +..|+.. ..++.|.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 46778999999998777766589999998665543 22221 23456889999995 3344332 2345666
Q ss_pred EEcCCCCc--------c--e-eEeec-ccccEEEEEECCCCCEEEEeeC-------------CCcEEEEEccCC---CCC
Q psy9936 158 MWSPTVQK--------P--L-ASLLC-HKAGIQSVAVNHTGTYMATSAG-------------DSQLRIWDVRNL---EGP 209 (315)
Q Consensus 158 i~d~~~~~--------~--~-~~~~~-~~~~i~~~~~sp~g~~l~~~~~-------------d~~i~iwd~~~~---~~~ 209 (315)
-|.+..+. . + ..+.. .......|.|.|||.++++.+. .|.|.-.+.... ..+
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nP 190 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNP 190 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCS
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCC
Confidence 66554311 1 1 11211 1112357999999987766442 234444444321 011
Q ss_pred ---eeEe-ccCCCceeEEEccCCeEEEEc
Q psy9936 210 ---LNTF-RTRTPINNLAFSQRGLLATSR 234 (315)
Q Consensus 210 ---~~~~-~~~~~v~~~~~s~~g~~~~~~ 234 (315)
...+ ..+.....++|+|+|.+.++.
T Consensus 191 f~~~~i~a~G~RNp~Gla~dp~G~L~~~d 219 (347)
T 3das_A 191 FPGSPVYSYGHRNVQGLAWDDKQRLFASE 219 (347)
T ss_dssp STTCCEEEBCCSBCCEEEECTTCCEEEEE
T ss_pred CCCCeEEeeCCCCcceEEECCCCCEEEEe
Confidence 1122 234467899999998655543
No 336
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.20 E-value=0.19 Score=49.11 Aligned_cols=127 Identities=12% Similarity=0.016 Sum_probs=77.8
Q ss_pred eEEEEEccCceEEEEecCC--CceeEEEEeecCcEEEEEeCCeEEEEeCCCCEEEE---eecCCceEEEEEcCC------
Q psy9936 33 HVAAFDWVRKTLACEMNVM--EEVYDIKWLHLETMFAVAQKDWVYIYDNQGIELHC---LKVLNKVTRMEFLPY------ 101 (315)
Q Consensus 33 ~i~v~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~~~i~i~~~~~~~~~~---~~~~~~v~~~~~~~~------ 101 (315)
.|++.+......+..+... ..|...+.+ +..++.+.++.+.++.++...+.. ......|.|+++.|.
T Consensus 493 ~Irli~~~~~~~~~~w~~p~~~~I~~As~n--~~~vvva~g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~ 570 (1158)
T 3ei3_A 493 SVRLVSQEPKALVSEWKEPQAKNISVASCN--SSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGL 570 (1158)
T ss_dssp CEEEEESSSCCEEEEECCTTCCCCCEEEEC--SSEEEEEETTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTC
T ss_pred EEEEEECCCCeEEEEEECCCCCEEEEEEeC--CCEEEEEECCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCccc
Confidence 3666665554455555433 245555533 345555567788888774333332 223478999999864
Q ss_pred CceEEEEcC-CCeEEEEEccCCeEEEEeccC-CCCeEEEEEc--CCCCEEEEEcCCCeEEEEcC
Q psy9936 102 HFLLATASE-EGYLSWLDTSIGKIVSDFSAK-KGKLSVMTQN--PYNACICLGHRNGTVTMWSP 161 (315)
Q Consensus 102 ~~~l~~~~~-d~~i~~~d~~~~~~~~~~~~~-~~~v~~~~~~--p~~~~l~~~~~d~~i~i~d~ 161 (315)
+.++++|.. |++++++++.+.+.+...... ...+.++.+. ....+|..|-.||.+.-+.+
T Consensus 571 s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~ 634 (1158)
T 3ei3_A 571 SPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGL 634 (1158)
T ss_dssp CSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEE
T ss_pred ccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEE
Confidence 368999987 999999999877666543321 1234444332 23357888889998765544
No 337
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.18 E-value=0.07 Score=43.86 Aligned_cols=177 Identities=12% Similarity=0.121 Sum_probs=92.0
Q ss_pred EEEEEcCCCeEEEEEccCceEEEE-ecC-CCceeEEEEeecCcEEEEEeC-----C-------eEEEEeCCCCEEEEeec
Q psy9936 24 HLLLGGKRGHVAAFDWVRKTLACE-MNV-MEEVYDIKWLHLETMFAVAQK-----D-------WVYIYDNQGIELHCLKV 89 (315)
Q Consensus 24 ~l~~~~~dg~i~v~~~~~~~~~~~-~~~-~~~v~~~~~~~~~~~l~~~~~-----~-------~i~i~~~~~~~~~~~~~ 89 (315)
.++.|+. .+..||..+.+.... ... ...........++.+++.|+. + .+..||........+..
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 95 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP 95 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence 4455543 488999988876542 111 122222333446777776651 1 27788987766655432
Q ss_pred C---CceEEEEEcCCCceEEEEcCC-------CeEEEEEccCCeEEEEeccCCCCe-EEEEEcCCCCEEEEEcC------
Q psy9936 90 L---NKVTRMEFLPYHFLLATASEE-------GYLSWLDTSIGKIVSDFSAKKGKL-SVMTQNPYNACICLGHR------ 152 (315)
Q Consensus 90 ~---~~v~~~~~~~~~~~l~~~~~d-------~~i~~~d~~~~~~~~~~~~~~~~v-~~~~~~p~~~~l~~~~~------ 152 (315)
. ..-.+++. .++.+++.|+.+ ..+.+||+.+.+-...-....... .+++. .++.+++.|+.
T Consensus 96 ~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~ 173 (318)
T 2woz_A 96 LPSARCLFGLGE-VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKC 173 (318)
T ss_dssp BSSCBCSCEEEE-ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCB
T ss_pred CCccccccceEE-ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCc
Confidence 2 11112222 256677777653 248889988765443211111110 11222 46677777764
Q ss_pred CCeEEEEcCCCCccee--EeecccccEEEEEECCCCCEEEEeeCCC-----cEEEEEccCC
Q psy9936 153 NGTVTMWSPTVQKPLA--SLLCHKAGIQSVAVNHTGTYMATSAGDS-----QLRIWDVRNL 206 (315)
Q Consensus 153 d~~i~i~d~~~~~~~~--~~~~~~~~i~~~~~sp~g~~l~~~~~d~-----~i~iwd~~~~ 206 (315)
-..+.+||+.+.+-.. .+.........+. -++.+++.|+.++ .+.+||+.+.
T Consensus 174 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 174 TNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI--HKGKIVIAGGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEEEEEETTEEEEEEEEEETTTC
T ss_pred cceEEEEcCCCCEEEECCCCCCCcccceEEE--ECCEEEEEcCcCCCCccceEEEEECCCC
Confidence 2358999998764322 1111111112222 2567777776432 4778888764
No 338
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.18 E-value=0.015 Score=48.92 Aligned_cols=139 Identities=9% Similarity=-0.037 Sum_probs=80.3
Q ss_pred CceeEEEEeecCc-EEEEEeCCeEEEEeCCCCEEEEee--------cCCceEEEEEcCC---CceEEEEc-C-------C
Q psy9936 52 EEVYDIKWLHLET-MFAVAQKDWVYIYDNQGIELHCLK--------VLNKVTRMEFLPY---HFLLATAS-E-------E 111 (315)
Q Consensus 52 ~~v~~~~~~~~~~-~l~~~~~~~i~i~~~~~~~~~~~~--------~~~~v~~~~~~~~---~~~l~~~~-~-------d 111 (315)
.....++|.|+|+ ++++...+.|++++.++.....+. .......++++|+ +..|+.+. . .
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 3568899999999 887777899999987543211111 1245689999996 44444432 2 2
Q ss_pred CeEEEEEccCC--e--EEEE-ecc------CCCCeEEEEEcCCCCEEEEEcC-------------CCeEEEEcCCCCc--
Q psy9936 112 GYLSWLDTSIG--K--IVSD-FSA------KKGKLSVMTQNPYNACICLGHR-------------NGTVTMWSPTVQK-- 165 (315)
Q Consensus 112 ~~i~~~d~~~~--~--~~~~-~~~------~~~~v~~~~~~p~~~~l~~~~~-------------d~~i~i~d~~~~~-- 165 (315)
..|..|++... . .... +.. .......++|.|||.++++.+. .|.|.-++....-
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~ 177 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPD 177 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCT
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCC
Confidence 35766776432 1 1111 111 1112356999999976555433 2467777765320
Q ss_pred ----------ceeEe-ecccccEEEEEECC-CCCEEEE
Q psy9936 166 ----------PLASL-LCHKAGIQSVAVNH-TGTYMAT 191 (315)
Q Consensus 166 ----------~~~~~-~~~~~~i~~~~~sp-~g~~l~~ 191 (315)
....+ .++. ....++|+| +|.++++
T Consensus 178 ~npf~~~~~~~~~i~a~G~r-np~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 178 DNPFIKESGVRAEIWSYGIR-NPQGMAMNPWSNALWLN 214 (353)
T ss_dssp TCTTTTSTTSCTTEEEECCS-EEEEEEEETTTTEEEEE
T ss_pred CCCCcCCCCCCccEEEEcCc-CccceEEECCCCCEEEE
Confidence 11112 2333 357899999 6665554
No 339
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.18 E-value=0.12 Score=47.69 Aligned_cols=186 Identities=10% Similarity=0.076 Sum_probs=105.9
Q ss_pred CCCCEEEEEcCC----CeEEEEEccCceEEEEe-c------CCC-ceeEEEEee-cCcEEEEEe-C------CeEEEEeC
Q psy9936 20 KNGRHLLLGGKR----GHVAAFDWVRKTLACEM-N------VME-EVYDIKWLH-LETMFAVAQ-K------DWVYIYDN 79 (315)
Q Consensus 20 ~~~~~l~~~~~d----g~i~v~~~~~~~~~~~~-~------~~~-~v~~~~~~~-~~~~l~~~~-~------~~i~i~~~ 79 (315)
.++..++.|+.+ ..+.+||..+++....- . ... .-.+++..+ ++++++.|+ + +.+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456677777643 46888998887655433 2 111 123333333 777777764 1 36889999
Q ss_pred CCCEEEEeecC---CceEEEEEcCCCceEEEEcCCC--eEEEEEccCCeEEEEe-----ccCCCCeEEEEEcCC-CCEEE
Q psy9936 80 QGIELHCLKVL---NKVTRMEFLPYHFLLATASEEG--YLSWLDTSIGKIVSDF-----SAKKGKLSVMTQNPY-NACIC 148 (315)
Q Consensus 80 ~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~d~--~i~~~d~~~~~~~~~~-----~~~~~~v~~~~~~p~-~~~l~ 148 (315)
.......+... ..-.+++...++.+++.|+.++ .+.+||+.+.+-...- ........++.+..+ +.+++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 77666554322 1122333334778888887654 6999999877543321 111122233555655 66777
Q ss_pred EEcC--C-----CeEEEEcCCCCcc-----eeEeec---c-cccEEEEEECCCCCEEEEeeCC--------CcEEEEEcc
Q psy9936 149 LGHR--N-----GTVTMWSPTVQKP-----LASLLC---H-KAGIQSVAVNHTGTYMATSAGD--------SQLRIWDVR 204 (315)
Q Consensus 149 ~~~~--d-----~~i~i~d~~~~~~-----~~~~~~---~-~~~i~~~~~sp~g~~l~~~~~d--------~~i~iwd~~ 204 (315)
.|+. + ..+.+||+.+.+. -..+.. . .... ++....++.+++.|+.+ ..+.+||+.
T Consensus 556 ~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 634 (695)
T 2zwa_A 556 LGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGS-QIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPL 634 (695)
T ss_dssp ECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSC-EEEEEETTEEEEECCBCSSCCCCTTTSEEEEETT
T ss_pred ECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccc-eEEEeCCCEEEEECCccCCCCCCCCCeEEEEECC
Confidence 7765 2 4689999887762 111211 1 1111 22333337777777743 458899988
Q ss_pred CC
Q psy9936 205 NL 206 (315)
Q Consensus 205 ~~ 206 (315)
+.
T Consensus 635 t~ 636 (695)
T 2zwa_A 635 SE 636 (695)
T ss_dssp TT
T ss_pred CC
Confidence 74
No 340
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.13 E-value=0.039 Score=48.10 Aligned_cols=104 Identities=14% Similarity=0.151 Sum_probs=62.2
Q ss_pred CCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeE--EEEecc------CCCCeEEEEEcCC---CCEEEEEcC------
Q psy9936 90 LNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKI--VSDFSA------KKGKLSVMTQNPY---NACICLGHR------ 152 (315)
Q Consensus 90 ~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~--~~~~~~------~~~~v~~~~~~p~---~~~l~~~~~------ 152 (315)
......|+|.|+|.++++-...+.|.+++..++.. +..+.. ....+..|+|+|+ +..|+++..
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 45678999999998777665545788888655543 222321 2355789999995 444444331
Q ss_pred -------CCeEEEEcCCCC-------ccee-Eeec-ccccEEEEEECCCCCEEEEee
Q psy9936 153 -------NGTVTMWSPTVQ-------KPLA-SLLC-HKAGIQSVAVNHTGTYMATSA 193 (315)
Q Consensus 153 -------d~~i~i~d~~~~-------~~~~-~~~~-~~~~i~~~~~sp~g~~l~~~~ 193 (315)
...|.-|++..+ +.+. .+.. .......|+|.|||.++++.+
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 234555554322 1111 1221 112468899999998666544
No 341
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.02 E-value=0.04 Score=46.16 Aligned_cols=188 Identities=11% Similarity=0.037 Sum_probs=95.4
Q ss_pred CCCEEEEEcC-C---------CeEEEEEccCceEEEEecC--CCceeEEEEeecCcEEEEEe-C----------------
Q psy9936 21 NGRHLLLGGK-R---------GHVAAFDWVRKTLACEMNV--MEEVYDIKWLHLETMFAVAQ-K---------------- 71 (315)
Q Consensus 21 ~~~~l~~~~~-d---------g~i~v~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~-~---------------- 71 (315)
++..++.|+. + ..+.+||..+.+....-.. .......+...++++++.|+ +
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~ 144 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGK 144 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTT
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCC
Confidence 5666666665 1 3588899888775543321 12222222336777777775 2
Q ss_pred -----------------------CeEEEEeCCCCEEEEeecC---Cce-EEEEEcCCCceEEEEcC------CCeEEEEE
Q psy9936 72 -----------------------DWVYIYDNQGIELHCLKVL---NKV-TRMEFLPYHFLLATASE------EGYLSWLD 118 (315)
Q Consensus 72 -----------------------~~i~i~~~~~~~~~~~~~~---~~v-~~~~~~~~~~~l~~~~~------d~~i~~~d 118 (315)
..+.+||+.......+... ... .+++. .++.+++.|+. ...+..||
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d 223 (357)
T 2uvk_A 145 DSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELD 223 (357)
T ss_dssp CHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEE
T ss_pred cccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEE
Confidence 4799999977665554322 111 22322 25666666653 23577788
Q ss_pred c--cCCeEEE--EeccCCCCeEEEEEcCCCCEEEEEcCC----------------------CeEEEEcCCCCcc--eeEe
Q psy9936 119 T--SIGKIVS--DFSAKKGKLSVMTQNPYNACICLGHRN----------------------GTVTMWSPTVQKP--LASL 170 (315)
Q Consensus 119 ~--~~~~~~~--~~~~~~~~v~~~~~~p~~~~l~~~~~d----------------------~~i~i~d~~~~~~--~~~~ 170 (315)
+ .+.+-.. .+..........+...++.+++.|+.+ ..+.+||+.+.+. +..+
T Consensus 224 ~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~ 303 (357)
T 2uvk_A 224 FTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGEL 303 (357)
T ss_dssp CC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEEC
T ss_pred ecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCC
Confidence 7 4443222 111111111111222356777777632 2578899887643 2222
Q ss_pred ecccccEEEEEECCCCCEEEEeeCCC------cEEEEEccCCCCCeeE
Q psy9936 171 LCHKAGIQSVAVNHTGTYMATSAGDS------QLRIWDVRNLEGPLNT 212 (315)
Q Consensus 171 ~~~~~~i~~~~~sp~g~~l~~~~~d~------~i~iwd~~~~~~~~~~ 212 (315)
......-.+ ...++++++.|+.++ .+.++++++. +.+..
T Consensus 304 p~~r~~~~~--~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~-~~~~~ 348 (357)
T 2uvk_A 304 SQGRAYGVS--LPWNNSLLIIGGETAGGKAVTDSVLITVKDN-KVTVQ 348 (357)
T ss_dssp SSCCBSSEE--EEETTEEEEEEEECGGGCEEEEEEEEEC-CC-SCEEE
T ss_pred CCCccccee--EEeCCEEEEEeeeCCCCCEeeeEEEEEEcCc-EeEee
Confidence 222222122 234677888887553 3666688776 54443
No 342
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.83 E-value=0.08 Score=44.25 Aligned_cols=140 Identities=9% Similarity=-0.065 Sum_probs=74.2
Q ss_pred CCCEEEEEcCC-CeEEEEEccC--ceEEEEecCC--CceeEEEEeecCcEEEEEeC-----------CeEEEEeCCCCEE
Q psy9936 21 NGRHLLLGGKR-GHVAAFDWVR--KTLACEMNVM--EEVYDIKWLHLETMFAVAQK-----------DWVYIYDNQGIEL 84 (315)
Q Consensus 21 ~~~~l~~~~~d-g~i~v~~~~~--~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~-----------~~i~i~~~~~~~~ 84 (315)
++..++.|+.+ ..+.+||..+ .+....-... ......+..-++++++.|+. +.+.+||+.....
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W 98 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSW 98 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcE
Confidence 56666776643 4688899864 4433222212 22222222235666665532 3689999977766
Q ss_pred EEeecCC---ceEEEEEcCCCceEEEEcCC---------------------------------------CeEEEEEccCC
Q psy9936 85 HCLKVLN---KVTRMEFLPYHFLLATASEE---------------------------------------GYLSWLDTSIG 122 (315)
Q Consensus 85 ~~~~~~~---~v~~~~~~~~~~~l~~~~~d---------------------------------------~~i~~~d~~~~ 122 (315)
..+.... .....+...++++++.|+.+ ..+.+||+.+.
T Consensus 99 ~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~ 178 (357)
T 2uvk_A 99 VKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQ 178 (357)
T ss_dssp EECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTT
T ss_pred EECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCC
Confidence 5543221 11111222567788888754 57899999877
Q ss_pred eEEEE--eccCCCCeEEEEEcCCCCEEEEEcC------CCeEEEEcC
Q psy9936 123 KIVSD--FSAKKGKLSVMTQNPYNACICLGHR------NGTVTMWSP 161 (315)
Q Consensus 123 ~~~~~--~~~~~~~v~~~~~~p~~~~l~~~~~------d~~i~i~d~ 161 (315)
+-... +......-.+++. -++.+++.|+. ...+.+||+
T Consensus 179 ~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 179 QWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp EEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEEC
T ss_pred cEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEe
Confidence 53332 2211111022322 25666777664 235777876
No 343
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.79 E-value=0.17 Score=41.66 Aligned_cols=207 Identities=10% Similarity=0.125 Sum_probs=129.7
Q ss_pred CeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEeCCeEEEEeCCCC-EEEEeecCCceEEEEEcCCCceEEEEcC
Q psy9936 32 GHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQKDWVYIYDNQGI-ELHCLKVLNKVTRMEFLPYHFLLATASE 110 (315)
Q Consensus 32 g~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 110 (315)
..|.|.|+.++........ ..-+.-.+|..+.+|.-....+.++|++.+ .+.......+|..-.|-.+. .|+..+
T Consensus 49 ~~VvIiDl~n~~~~~Rrpi--~AdsAIMnP~~~ViALrag~~LQiFnletK~klks~~~~e~VvfWkWis~~-~L~lVT- 124 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIRRPI--SADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLN-TVALVT- 124 (365)
T ss_dssp EEEEEEETTSTTSCEEEEC--CCSEEEECSSSSEEEEEETTEEEEEETTTTEEEEEEECSSCEEEEEECSSS-EEEEEE-
T ss_pred CEEEEEECCCCCCcccccc--ccceeeeCCCccEEEEecCCeEEEechHHhhhhcceecCCccEEEEecCCC-eEEEEc-
Confidence 4788888877554322221 122344588899999888889999999765 45555566888888887655 344443
Q ss_pred CCeEEEEEccC-CeEEEEeccCC----CCeEEEEEcCCCCEEEEEc-------CCCeEEEEcCCCCcceeEeecccccEE
Q psy9936 111 EGYLSWLDTSI-GKIVSDFSAKK----GKLSVMTQNPYNACICLGH-------RNGTVTMWSPTVQKPLASLLCHKAGIQ 178 (315)
Q Consensus 111 d~~i~~~d~~~-~~~~~~~~~~~----~~v~~~~~~p~~~~l~~~~-------~d~~i~i~d~~~~~~~~~~~~~~~~i~ 178 (315)
+..|+.|++.. ..++..+..|. ..|..-..+++.++++..+ -.|.+.+|..+.+ .-+.+.+|.+.-.
T Consensus 125 ~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~ 203 (365)
T 2xzh_A 125 DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFA 203 (365)
T ss_dssp SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEE
T ss_pred CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeeeeeE
Confidence 45899999974 35666666553 3477778889999776543 2378899998754 4556777766543
Q ss_pred EEEECCC---CCEEEEeeC---CCcEEEEEccCC--CC-Ce-----eEeccCC----CceeEEEccC-C-eEEEEcCCEE
Q psy9936 179 SVAVNHT---GTYMATSAG---DSQLRIWDVRNL--EG-PL-----NTFRTRT----PINNLAFSQR-G-LLATSRGNIV 238 (315)
Q Consensus 179 ~~~~sp~---g~~l~~~~~---d~~i~iwd~~~~--~~-~~-----~~~~~~~----~v~~~~~s~~-g-~~~~~~~~~i 238 (315)
.+.+.-+ ..+++.+.. .+.++|.++... .. +. ..+..+. -..++..|+. | .|+.+.-|.+
T Consensus 204 ~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~i 283 (365)
T 2xzh_A 204 QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYI 283 (365)
T ss_dssp EECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEE
T ss_pred EEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEE
Confidence 3333211 124444432 257899988432 01 11 1111111 1356666664 4 5889999999
Q ss_pred EecCC
Q psy9936 239 EFLKP 243 (315)
Q Consensus 239 ~~~~~ 243 (315)
..++.
T Consensus 284 hlyDl 288 (365)
T 2xzh_A 284 HLYDL 288 (365)
T ss_dssp EEEET
T ss_pred EEEEc
Confidence 98888
No 344
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.75 E-value=0.27 Score=43.48 Aligned_cols=213 Identities=11% Similarity=0.062 Sum_probs=121.6
Q ss_pred CCCEEEEEc-CCCeEEEEEccCceEEEEec--CCCceeEEEEe--ecCcEEEEEeC--------Ce-E--------EEE-
Q psy9936 21 NGRHLLLGG-KRGHVAAFDWVRKTLACEMN--VMEEVYDIKWL--HLETMFAVAQK--------DW-V--------YIY- 77 (315)
Q Consensus 21 ~~~~l~~~~-~dg~i~v~~~~~~~~~~~~~--~~~~v~~~~~~--~~~~~l~~~~~--------~~-i--------~i~- 77 (315)
||++|..-. .+..|-..+++..++-..+. ....+..++|- |+..++.+++. |. + .+|
T Consensus 141 DGrylfiNdkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~ 220 (638)
T 3sbq_A 141 DGKYLFINDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYN 220 (638)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEE
T ss_pred eeEEEEEecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEE
Confidence 677887765 45678888888777655544 55678888886 67667766542 22 1 111
Q ss_pred --eCCCCEE-EEeecCCceEEEEEcCCCceEEEEcCCC---------------eEEEEEccC-------Ce-------EE
Q psy9936 78 --DNQGIEL-HCLKVLNKVTRMEFLPYHFLLATASEEG---------------YLSWLDTSI-------GK-------IV 125 (315)
Q Consensus 78 --~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~---------------~i~~~d~~~-------~~-------~~ 125 (315)
|.++.++ .++.-.+..-.+...+++.+.++.+.+. -+.++|... |+ -+
T Consensus 221 ~iD~~tm~v~~Qv~v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv 300 (638)
T 3sbq_A 221 AIDAETMEMAFQVIVDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKT 300 (638)
T ss_dssp EEETTTCSEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCC
T ss_pred EEcCCccEEEEEEEcCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCe
Confidence 1111111 1111122333455566777777665432 255555431 10 01
Q ss_pred EEecc---------------CCCCeEEEEEcCCCCEEEEEc-CCCeEEEEcCCCC------cc-------eeEeeccccc
Q psy9936 126 SDFSA---------------KKGKLSVMTQNPYNACICLGH-RNGTVTMWSPTVQ------KP-------LASLLCHKAG 176 (315)
Q Consensus 126 ~~~~~---------------~~~~v~~~~~~p~~~~l~~~~-~d~~i~i~d~~~~------~~-------~~~~~~~~~~ 176 (315)
..+.+ -......+.++|||++++.++ .+.++.++|++.- +. +.+.. -...
T Consensus 301 ~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlG 379 (638)
T 3sbq_A 301 PVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLG 379 (638)
T ss_dssp CEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSC
T ss_pred eEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCc
Confidence 11211 112345678899999887765 4779999998731 11 22222 2345
Q ss_pred EEEEEECCCCCEEEEeeCCCcEEEEEccCC---------CCCeeEeccCCCceeEEE------ccCCeEEEEc
Q psy9936 177 IQSVAVNHTGTYMATSAGDSQLRIWDVRNL---------EGPLNTFRTRTPINNLAF------SQRGLLATSR 234 (315)
Q Consensus 177 i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~---------~~~~~~~~~~~~v~~~~~------s~~g~~~~~~ 234 (315)
....+|.++|.-..+.-.|..|.-|++... ...+..+..|..+-.+.- .|||.++++.
T Consensus 380 PlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~l 452 (638)
T 3sbq_A 380 PLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVAL 452 (638)
T ss_dssp EEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEE
T ss_pred ccEEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEe
Confidence 678899999954445558999999999752 134455566665544443 5677766664
No 345
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.74 E-value=0.23 Score=42.54 Aligned_cols=216 Identities=10% Similarity=0.140 Sum_probs=135.2
Q ss_pred CEEEEE---cCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEeCCeEEEEeCCCC-EEEEeecCCceEEEEE
Q psy9936 23 RHLLLG---GKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQKDWVYIYDNQGI-ELHCLKVLNKVTRMEF 98 (315)
Q Consensus 23 ~~l~~~---~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~~~~-~~~~~~~~~~v~~~~~ 98 (315)
+++.+- +....|.|.|+.++........ ..-+.-.+|..+.+|.-...++.++|++.+ .+.......+|..-.|
T Consensus 36 kyicVrE~~~~~~~vvIiDl~~~~~~~rrpi--~AdsAIMnP~~~iiALrag~~lQiFnle~K~klks~~~~e~VvfWkW 113 (494)
T 1bpo_A 36 KFICIREKVGEQAQVVIIDMNDPSNPIRRPI--SADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKW 113 (494)
T ss_dssp TEEEEEECCTTCCEEEEEETTSTTSCEEEEC--CCSEEEECSSSSCEEEEETTEEEEEETTTTEEEEEEECSSCCCEEEE
T ss_pred ceEEEEecCCCCCeEEEEECCCCCcceeccc--ccceeeeCCCCcEEEEecCCeEEEEchHHhhhhcceecCCCceEEEe
Confidence 455543 2234788888877554322221 123445688888998888899999999664 4455555678888888
Q ss_pred cCCCceEEEEcCCCeEEEEEccC-CeEEEEeccCC----CCeEEEEEcCCCCEEEEEc-------CCCeEEEEcCCCCcc
Q psy9936 99 LPYHFLLATASEEGYLSWLDTSI-GKIVSDFSAKK----GKLSVMTQNPYNACICLGH-------RNGTVTMWSPTVQKP 166 (315)
Q Consensus 99 ~~~~~~l~~~~~d~~i~~~d~~~-~~~~~~~~~~~----~~v~~~~~~p~~~~l~~~~-------~d~~i~i~d~~~~~~ 166 (315)
-.+. .|+..+ +..|+.|++.. ..++..+..|. ..|..-..+++.++++..| ..|.+.+|..+.+ .
T Consensus 114 is~~-~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~ 190 (494)
T 1bpo_A 114 ISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-V 190 (494)
T ss_dssp EETT-EEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-C
T ss_pred cCCC-eEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-c
Confidence 6554 444444 45899999963 35666666553 3477778899999877543 2478899998854 4
Q ss_pred eeEeecccccEEEEEECCC---CCEEEEeeCC---CcEEEEEccCC---CCCee--E---eccCC----CceeEEEccC-
Q psy9936 167 LASLLCHKAGIQSVAVNHT---GTYMATSAGD---SQLRIWDVRNL---EGPLN--T---FRTRT----PINNLAFSQR- 227 (315)
Q Consensus 167 ~~~~~~~~~~i~~~~~sp~---g~~l~~~~~d---~~i~iwd~~~~---~~~~~--~---~~~~~----~v~~~~~s~~- 227 (315)
-+.+.+|.+.-..+.+.-+ ..+++.+... +.++|.++... ..+.. . +..+. -..++..|+.
T Consensus 191 sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~ky 270 (494)
T 1bpo_A 191 SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKH 270 (494)
T ss_dssp EEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTT
T ss_pred cchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccC
Confidence 5667788765544444322 1245554432 67999998532 01111 1 11111 1356677764
Q ss_pred C-eEEEEcCCEEEecCC
Q psy9936 228 G-LLATSRGNIVEFLKP 243 (315)
Q Consensus 228 g-~~~~~~~~~i~~~~~ 243 (315)
| .|+.+.-|.+..++.
T Consensus 271 gviyviTK~G~i~lyDl 287 (494)
T 1bpo_A 271 DVVFLITKYGYIHLYDL 287 (494)
T ss_dssp TEEEEEETTSEEEEEET
T ss_pred CEEEEEecCceEEEEec
Confidence 4 588899999998887
No 346
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.38 E-value=0.24 Score=48.90 Aligned_cols=207 Identities=10% Similarity=0.112 Sum_probs=123.2
Q ss_pred CeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEeCCeEEEEeCCC-CEEEEeecCCceEEEEEcCCCceEEEEcC
Q psy9936 32 GHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQKDWVYIYDNQG-IELHCLKVLNKVTRMEFLPYHFLLATASE 110 (315)
Q Consensus 32 g~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 110 (315)
.+|.|.|+.++...... +-..-+.-.+|..+++|.-...++.|+|++. ..+.......+|..-.|-... .|+..+
T Consensus 48 ~~vvIidl~~~~~~~rr--pi~AdsAIMnP~~~iiALrag~~lQiFnl~~k~klks~~~~e~VvfWkWis~~-~l~lVT- 123 (1630)
T 1xi4_A 48 AQVVIIDMNDPSNPIRR--PISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLN-TVALVT- 123 (1630)
T ss_pred ceEEEEECCCCCCcccc--cccchhhccCCCcceEEEecCCeEEEeehHHhhhhcccccCCCceEEEecCCC-eeEEEc-
Confidence 47888888776543221 1122334457888888888888999999954 334444455778888886554 344443
Q ss_pred CCeEEEEEccC-CeEEEEeccC----CCCeEEEEEcCCCCEEEEEc-------CCCeEEEEcCCCCcceeEeecccccEE
Q psy9936 111 EGYLSWLDTSI-GKIVSDFSAK----KGKLSVMTQNPYNACICLGH-------RNGTVTMWSPTVQKPLASLLCHKAGIQ 178 (315)
Q Consensus 111 d~~i~~~d~~~-~~~~~~~~~~----~~~v~~~~~~p~~~~l~~~~-------~d~~i~i~d~~~~~~~~~~~~~~~~i~ 178 (315)
+..|+.|++.. ..++..|..| ...|..-..+++.++++..| ..|.+.+|..+.+ .-+.+.||.+.-.
T Consensus 124 ~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~~F~ 202 (1630)
T 1xi4_A 124 DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFA 202 (1630)
T ss_pred CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhHhhhh
Confidence 45799999963 3455555544 34577777889999776543 3578999988754 3345566665443
Q ss_pred EEEEC--C-CCCEEEEeeC---CCcEEEEEccCC--CC-Ce-----eEeccCC----CceeEEEccC-C-eEEEEcCCEE
Q psy9936 179 SVAVN--H-TGTYMATSAG---DSQLRIWDVRNL--EG-PL-----NTFRTRT----PINNLAFSQR-G-LLATSRGNIV 238 (315)
Q Consensus 179 ~~~~s--p-~g~~l~~~~~---d~~i~iwd~~~~--~~-~~-----~~~~~~~----~v~~~~~s~~-g-~~~~~~~~~i 238 (315)
.+... + ....++.+.. .+.++|.++... +. +. ..+..+. -..++..|+. | .++++.-|.+
T Consensus 203 ~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~ 282 (1630)
T 1xi4_A 203 QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYI 282 (1630)
T ss_pred eeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceE
Confidence 33332 1 1223443322 257888888432 01 11 1111111 1345566654 4 5788888988
Q ss_pred EecCC
Q psy9936 239 EFLKP 243 (315)
Q Consensus 239 ~~~~~ 243 (315)
..++.
T Consensus 283 ~~~d~ 287 (1630)
T 1xi4_A 283 HLYDL 287 (1630)
T ss_pred EEEec
Confidence 87777
No 347
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.11 E-value=0.27 Score=45.33 Aligned_cols=145 Identities=10% Similarity=0.085 Sum_probs=83.9
Q ss_pred CCCEEEEEcCC------CeEEEEEccCceEEEEecCCC--ceeEEEEeecCcEEEEEe-C--CeEEEEeCCCCEEEEeec
Q psy9936 21 NGRHLLLGGKR------GHVAAFDWVRKTLACEMNVME--EVYDIKWLHLETMFAVAQ-K--DWVYIYDNQGIELHCLKV 89 (315)
Q Consensus 21 ~~~~l~~~~~d------g~i~v~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~-~--~~i~i~~~~~~~~~~~~~ 89 (315)
++..++.|+.+ ..+.+||..+.+....-.... .-.+++...++++++.|+ + +.+.+||+.......+..
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~ 530 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTP 530 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccC
Confidence 66777777643 357889988876544322111 122233324777777765 2 279999998777666542
Q ss_pred C-------CceEEEEEcCC-CceEEEEcC--C-----CeEEEEEccCCe------EEEE--ec-cCCCCeEEEEEcCCCC
Q psy9936 90 L-------NKVTRMEFLPY-HFLLATASE--E-----GYLSWLDTSIGK------IVSD--FS-AKKGKLSVMTQNPYNA 145 (315)
Q Consensus 90 ~-------~~v~~~~~~~~-~~~l~~~~~--d-----~~i~~~d~~~~~------~~~~--~~-~~~~~v~~~~~~p~~~ 145 (315)
. ....++.+..+ +.+++.|+. + ..+.+||+.+.. -... .. ....... ++...++.
T Consensus 531 ~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~-~~~~~~~~ 609 (695)
T 2zwa_A 531 KDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQ-IKYITPRK 609 (695)
T ss_dssp SSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCE-EEEEETTE
T ss_pred CCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccce-EEEeCCCE
Confidence 1 22233555655 667777765 2 358899998776 2211 11 1111122 23333367
Q ss_pred EEEEEcC--------CCeEEEEcCCCCcc
Q psy9936 146 CICLGHR--------NGTVTMWSPTVQKP 166 (315)
Q Consensus 146 ~l~~~~~--------d~~i~i~d~~~~~~ 166 (315)
+++.|+. ...+.+||+.+.+.
T Consensus 610 iyv~GG~~~~~~~~~~~~v~~yd~~t~~W 638 (695)
T 2zwa_A 610 LLIVGGTSPSGLFDRTNSIISLDPLSETL 638 (695)
T ss_dssp EEEECCBCSSCCCCTTTSEEEEETTTTEE
T ss_pred EEEECCccCCCCCCCCCeEEEEECCCCeE
Confidence 7777774 34689999987653
No 348
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=95.23 E-value=0.95 Score=36.46 Aligned_cols=217 Identities=13% Similarity=0.092 Sum_probs=112.4
Q ss_pred cEEEEEEcCCCCEEEEEcCCCeEEEEEccC-ceEEEEecCCCceeEEEEeecCcEEEEEeCCeEEEEeCC--CCEEEEee
Q psy9936 12 GIYRMNYTKNGRHLLLGGKRGHVAAFDWVR-KTLACEMNVMEEVYDIKWLHLETMFAVAQKDWVYIYDNQ--GIELHCLK 88 (315)
Q Consensus 12 ~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~~--~~~~~~~~ 88 (315)
.|..++.... ..++. . ||.|+.|-... +++-........|..++-... ..++.. +|.|+.|-.. ++.-....
T Consensus 25 ~i~~ia~G~~-h~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~-hs~~l~-~G~v~~wG~n~~Gqlg~P~~ 99 (282)
T 3qhy_B 25 GVDAIAGGYF-HGLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNY-HSLALK-DGEVIAWGGNEDGQTTVPAE 99 (282)
T ss_dssp SCCEEEECSS-EEEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSS-EEEEEE-TTEEEEEECCTTSTTCCCGG
T ss_pred CCcEEEeCCC-eEEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCC-EEEEEE-CCEEEEeeCCCCCCCCCCcc
Confidence 4555554432 23333 4 88999996543 221111112235666655433 334443 8999999653 22111111
Q ss_pred cCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCeEEEEcCCCCccee
Q psy9936 89 VLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNGTVTMWSPTVQKPLA 168 (315)
Q Consensus 89 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~~~ 168 (315)
....|..++...... +.-. +|.|+.|-....-.+.........|..++...+.. ++. . ||.|..|-....-.+.
T Consensus 100 ~~~~v~~ia~G~~hs--~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~-~~l-~-~G~v~~wG~n~~gqlg 173 (282)
T 3qhy_B 100 ARSGVDAIAAGAWAS--YALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTA-LAV-K-NGGVIAWGDNYFGQTT 173 (282)
T ss_dssp GSSSEEEEEEETTEE--EEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEE-EEE-E-TTEEEEEECCTTSTTS
T ss_pred cCCCeEEEECcCCEE--EEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEE-EEE-E-CCEEEEecCCCCCCCC
Confidence 124677777665433 3334 89999997653211111111223566666544332 222 3 6889999766432222
Q ss_pred EeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccCCCCCeeEeccCCCceeEEEccCCeEEEEcCCEEEecCC
Q psy9936 169 SLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTRTPINNLAFSQRGLLATSRGNIVEFLKP 243 (315)
Q Consensus 169 ~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~~~~~~~~i~~~~~ 243 (315)
.-......|..++...... ++. .||.++.|-.....++-........|..++-..+..++.+ ++.+..|--
T Consensus 174 ~p~~~~~~v~~i~~G~~hs-~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~al~-~g~v~~wG~ 244 (282)
T 3qhy_B 174 VPAEAQSGVDDVAGGIFHS-LAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSLALK-NGKVIAWGS 244 (282)
T ss_dssp CCGGGGSSEEEEEECSSEE-EEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEEEEE-TTEEEEEST
T ss_pred CceecCCCeEEEEecCCEE-EEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEEEEEE-CCEEEEecC
Confidence 1111234677777654332 333 5899999976654222111122235777776666666666 888888864
No 349
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.54 E-value=0.28 Score=40.71 Aligned_cols=113 Identities=13% Similarity=0.126 Sum_probs=72.3
Q ss_pred ceEEEEcCCCeEEEEEccCCeEEEEeccC-CCCeEEEEE--cC-CCCEEEEE-cCCCeEEEEcCCCCcceeEeec----c
Q psy9936 103 FLLATASEEGYLSWLDTSIGKIVSDFSAK-KGKLSVMTQ--NP-YNACICLG-HRNGTVTMWSPTVQKPLASLLC----H 173 (315)
Q Consensus 103 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-~~~v~~~~~--~p-~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~----~ 173 (315)
..+++++.||.|+-+|..+|+..-.+... ..++....- .+ ++..++.. +.||.|..++..+|.....+.. .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 47888999999999999999998887654 122222110 01 22333333 5899999999988854443331 1
Q ss_pred cccEEE---EEE-C----CCCCEEEEeeCCCcEEEEEccCCCCCeeEeccC
Q psy9936 174 KAGIQS---VAV-N----HTGTYMATSAGDSQLRIWDVRNLEGPLNTFRTR 216 (315)
Q Consensus 174 ~~~i~~---~~~-s----p~g~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 216 (315)
.+++.. ... . ..+..+++|+.++.+.-.|+.++ +.+..+...
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG-~~~W~~~~~ 140 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNG-EIISAFGPG 140 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTC-CEEEEESTT
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCC-cEEEEEecC
Confidence 122221 001 0 14557889999999999999999 888777644
No 350
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=93.39 E-value=2.5 Score=33.92 Aligned_cols=191 Identities=14% Similarity=0.151 Sum_probs=97.0
Q ss_pred CCeEEEEEccC-ceEEEEecCCCceeEEEEeecCcEEEEEeCCeEEEEeCC--CCEEEEeecCCceEEEEEcCCCceEEE
Q psy9936 31 RGHVAAFDWVR-KTLACEMNVMEEVYDIKWLHLETMFAVAQKDWVYIYDNQ--GIELHCLKVLNKVTRMEFLPYHFLLAT 107 (315)
Q Consensus 31 dg~i~v~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~ 107 (315)
||.|+.|-... +++-........|..++... ...++.. +|.|+.|-.. ++.-........|..++...... ++
T Consensus 80 ~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~-~hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~-~~- 155 (282)
T 3qhy_B 80 DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGA-WASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTA-LA- 155 (282)
T ss_dssp TTEEEEEECCTTSTTCCCGGGSSSEEEEEEET-TEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEE-EE-
T ss_pred CCEEEEeeCCCCCCCCCCcccCCCeEEEECcC-CEEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEE-EE-
Confidence 78888886442 22111111234566665443 3455556 9999999652 22111112235677776554432 22
Q ss_pred EcCCCeEEEEEccCCeEEEEeccCCCCeEEEEEcCCCCEEEEEcCCCeEEEEcCCCCcceeEeecccccEEEEEECCCCC
Q psy9936 108 ASEEGYLSWLDTSIGKIVSDFSAKKGKLSVMTQNPYNACICLGHRNGTVTMWSPTVQKPLASLLCHKAGIQSVAVNHTGT 187 (315)
Q Consensus 108 ~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~sp~g~ 187 (315)
-. ||.++.|-....-.+..-......|..++...+. .++. .||.|..|-....-.+..-......|..|+-.....
T Consensus 156 l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~ 231 (282)
T 3qhy_B 156 VK-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYS 231 (282)
T ss_dssp EE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSE-EEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCE
T ss_pred EE-CCEEEEecCCCCCCCCCceecCCCeEEEEecCCE-EEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEE
Confidence 23 6889998765321111101112457777665433 3333 589999997654322211111123566666554433
Q ss_pred EEEEeeCCCcEEEEEccCCCCCeeEeccCCCceeEEEccCCeEEEEcCC
Q psy9936 188 YMATSAGDSQLRIWDVRNLEGPLNTFRTRTPINNLAFSQRGLLATSRGN 236 (315)
Q Consensus 188 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~~~~~~~ 236 (315)
++.. ||.+..|-.... .++. ....|.+++-.+...++...++
T Consensus 232 -~al~--~g~v~~wG~n~~-gq~~---v~~~v~~iaaG~~h~~al~~~~ 273 (282)
T 3qhy_B 232 -LALK--NGKVIAWGSSRT-APSS---VQSGVSSIEAGPNAAYALKGGS 273 (282)
T ss_dssp -EEEE--TTEEEEESTTCC-CCGG---GSSCEEEEEECSSCEEEEEC--
T ss_pred -EEEE--CCEEEEecCCCC-cccc---CCCCcEEEEECcCeEEEEecCC
Confidence 3333 899999976654 3332 2335666666665555555444
No 351
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=93.36 E-value=1.8 Score=37.64 Aligned_cols=104 Identities=13% Similarity=0.170 Sum_probs=59.2
Q ss_pred CCeEEEEEcCCCC-EEEEEcCCCeEEEEcCCCC---cceeEee---------cccccEEEEEECCC----CCEEEEeeC-
Q psy9936 133 GKLSVMTQNPYNA-CICLGHRNGTVTMWSPTVQ---KPLASLL---------CHKAGIQSVAVNHT----GTYMATSAG- 194 (315)
Q Consensus 133 ~~v~~~~~~p~~~-~l~~~~~d~~i~i~d~~~~---~~~~~~~---------~~~~~i~~~~~sp~----g~~l~~~~~- 194 (315)
.....|+|.|+|. .|+++...|.|++++.... ..+..+. ........|+|+|+ +.+.++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 3467899999996 4555667899999975432 1222221 01356789999997 443333221
Q ss_pred -C----------CcEEEEEccCC---------CCCeeEecc---CCCceeEEEccCC-eEEEEcCC
Q psy9936 195 -D----------SQLRIWDVRNL---------EGPLNTFRT---RTPINNLAFSQRG-LLATSRGN 236 (315)
Q Consensus 195 -d----------~~i~iwd~~~~---------~~~~~~~~~---~~~v~~~~~s~~g-~~~~~~~~ 236 (315)
+ ..|.-|.+... .+.+..+.. +.....|+|.||| +|++.+|+
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 1 13444555421 012222221 1236789999999 56666654
No 352
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=92.16 E-value=5.4 Score=34.63 Aligned_cols=101 Identities=11% Similarity=0.033 Sum_probs=58.5
Q ss_pred CcEEEEEEcCCCC-EEEEEcCCCeEEEEEccCce---EEEEec---C-------CCceeEEEEeec----CcEEEEEe--
Q psy9936 11 FGIYRMNYTKNGR-HLLLGGKRGHVAAFDWVRKT---LACEMN---V-------MEEVYDIKWLHL----ETMFAVAQ-- 70 (315)
Q Consensus 11 ~~v~~~~~s~~~~-~l~~~~~dg~i~v~~~~~~~---~~~~~~---~-------~~~v~~~~~~~~----~~~l~~~~-- 70 (315)
..+..|+|.|||. .|+++...|.|++++..... .+..+. . ......|+|+|+ +.++++-+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 4567999999996 44445678999999754321 222221 1 346788999996 44444322
Q ss_pred -C----------CeEEEEeCCC-----------CEEEEeec---CCceEEEEEcCCCceEEEEcCC
Q psy9936 71 -K----------DWVYIYDNQG-----------IELHCLKV---LNKVTRMEFLPYHFLLATASEE 111 (315)
Q Consensus 71 -~----------~~i~i~~~~~-----------~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d 111 (315)
+ ..|.-|.+.. ..+..+.. ......|.|.|||.++++.+..
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 1 1344455421 11222221 1346789999999877766543
No 353
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=90.50 E-value=7.1 Score=32.82 Aligned_cols=170 Identities=12% Similarity=0.015 Sum_probs=88.0
Q ss_pred EEEEEcCCCeEEEEEccC-c-eEEEE--ecCCCceeEEEEee--cCcEEEEEeCC----eEEEEeCCCCEEEEeec----
Q psy9936 24 HLLLGGKRGHVAAFDWVR-K-TLACE--MNVMEEVYDIKWLH--LETMFAVAQKD----WVYIYDNQGIELHCLKV---- 89 (315)
Q Consensus 24 ~l~~~~~dg~i~v~~~~~-~-~~~~~--~~~~~~v~~~~~~~--~~~~l~~~~~~----~i~i~~~~~~~~~~~~~---- 89 (315)
.|.+++..| +.+++... + ..... ......|.++++.| ++.+++.+..+ .|...+-.+.....+..
T Consensus 24 ~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~ 102 (394)
T 3b7f_A 24 MLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAF 102 (394)
T ss_dssp EEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCC
T ss_pred EEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccccC
Confidence 667777777 55555432 2 22211 12345699999998 66777776665 55554433333222221
Q ss_pred -----------CCceEEEEEcCC--CceEEEEcCCCeEEEEEccCCeEEEEecc-------------------CCCCeEE
Q psy9936 90 -----------LNKVTRMEFLPY--HFLLATASEEGYLSWLDTSIGKIVSDFSA-------------------KKGKLSV 137 (315)
Q Consensus 90 -----------~~~v~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~~~~~~~~~-------------------~~~~v~~ 137 (315)
...|.++++.|. ...+++++..+.|...+ +.++.-..+.. ....+.+
T Consensus 103 ~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~ 181 (394)
T 3b7f_A 103 NKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHS 181 (394)
T ss_dssp CCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEE
T ss_pred CCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeE
Confidence 124778888872 45566666566554443 22332222211 1234788
Q ss_pred EEEcCC-CCEEEEEcCCCeEEEEcCCCCcceeEeec-----c--------cccEEEEEECCC-CCEEEEeeCCC
Q psy9936 138 MTQNPY-NACICLGHRNGTVTMWSPTVQKPLASLLC-----H--------KAGIQSVAVNHT-GTYMATSAGDS 196 (315)
Q Consensus 138 ~~~~p~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-----~--------~~~i~~~~~sp~-g~~l~~~~~d~ 196 (315)
|.++|. ...|+.+..++.|...+-. ++.-..+.. + ...+.++.++|. ...|..+...+
T Consensus 182 i~~d~~~~~~l~vg~~~ggl~~s~Dg-G~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g 254 (394)
T 3b7f_A 182 ILVDPRDPKHLYIGMSSGGVFESTDA-GTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG 254 (394)
T ss_dssp EEECTTCTTCEEEEEETBEEEEESST-TSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE
T ss_pred EEECCCCCCEEEEEECCCCEEEECCC-CCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe
Confidence 999883 3445555444544444322 222222110 0 134889999986 35566665544
No 354
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=90.35 E-value=7.3 Score=32.74 Aligned_cols=171 Identities=12% Similarity=0.025 Sum_probs=85.6
Q ss_pred CCcEEEEEEcC--CCCEEEEEcCCC----eEEEEEccCceEEEEecC---------------CCceeEEEEee---cCcE
Q psy9936 10 QFGIYRMNYTK--NGRHLLLGGKRG----HVAAFDWVRKTLACEMNV---------------MEEVYDIKWLH---LETM 65 (315)
Q Consensus 10 ~~~v~~~~~s~--~~~~l~~~~~dg----~i~v~~~~~~~~~~~~~~---------------~~~v~~~~~~~---~~~~ 65 (315)
...|.+|++.| .+..++ ++..| .|...+ +.++.-..+.. ...|.++++.| .+.+
T Consensus 54 ~~~v~~i~~dp~~~~~l~~-g~~~g~~g~gl~~s~-D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l 131 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLM-AARTGHLGPTVFRSD-DGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTW 131 (394)
T ss_dssp TSEEEEEEECSSSTTCEEE-EEEC--CCEEEEEES-STTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCE
T ss_pred CCceEEEEECCCCCCeEEE-EecCCCCCccEEEeC-CCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEE
Confidence 56799999998 454444 44344 344332 33322111110 12467788886 4566
Q ss_pred EEEEeCCeEEEEeCCCCEEEEeec--------------------CCceEEEEEcCC-CceEEEEcCCCeEEEEEccCCeE
Q psy9936 66 FAVAQKDWVYIYDNQGIELHCLKV--------------------LNKVTRMEFLPY-HFLLATASEEGYLSWLDTSIGKI 124 (315)
Q Consensus 66 l~~~~~~~i~i~~~~~~~~~~~~~--------------------~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~ 124 (315)
++.+..+.|+..+-.+.....+.. ...+.+|.++|. ...++.+..++.|...+ ..++.
T Consensus 132 ~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~t 210 (394)
T 3b7f_A 132 YAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTD 210 (394)
T ss_dssp EEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEES-STTSS
T ss_pred EEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCC
Confidence 666666777666544444333321 135778999884 34455554444444332 22332
Q ss_pred EEEeccC-------------CCCeEEEEEcCC-CCEEEEEcCCCeEEEEcCCCCcceeEeec--cc---ccEEEEEECCC
Q psy9936 125 VSDFSAK-------------KGKLSVMTQNPY-NACICLGHRNGTVTMWSPTVQKPLASLLC--HK---AGIQSVAVNHT 185 (315)
Q Consensus 125 ~~~~~~~-------------~~~v~~~~~~p~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~---~~i~~~~~sp~ 185 (315)
-..+... ...+..+.++|. ...|+.+...+ |...+-. ++.-..+.. .. ..+..++++|.
T Consensus 211 W~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~D~-G~tW~~~~~~l~~~~~~~~~~i~~~p~ 288 (394)
T 3b7f_A 211 WKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMDRR-EGVWKRIGDAMPREVGDIGFPIVVHQR 288 (394)
T ss_dssp CEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEETT-TTEEECGGGGSCTTTCSCEEEEEECSS
T ss_pred ceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeCCC-CCcceECCCCCCCCCccceEEEEECCC
Confidence 2222110 124788999986 35666665544 4443322 221111111 11 23567888864
No 355
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=89.80 E-value=12 Score=34.48 Aligned_cols=210 Identities=10% Similarity=0.075 Sum_probs=110.4
Q ss_pred EEEE-EcCCCCEEEEEc----CC-CeEEEEEccCceEEEE-ecCCC--------ceeEEEEeecCcEEEEEe--------
Q psy9936 14 YRMN-YTKNGRHLLLGG----KR-GHVAAFDWVRKTLACE-MNVME--------EVYDIKWLHLETMFAVAQ-------- 70 (315)
Q Consensus 14 ~~~~-~s~~~~~l~~~~----~d-g~i~v~~~~~~~~~~~-~~~~~--------~v~~~~~~~~~~~l~~~~-------- 70 (315)
..+. ++|++++++.+- .| ..++++|+.+++.+.. +.... ....++|..+..++++..
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~ 211 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITS 211 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCT
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCc
Confidence 4555 899999877542 22 4799999999987631 11000 013448886555555431
Q ss_pred ---CCeEEEEeCCC---CEEEEeecC-Cc-eEEEEEcCCCce-----EEEEc---CCCeEEEEEccC--CeEEEEeccCC
Q psy9936 71 ---KDWVYIYDNQG---IELHCLKVL-NK-VTRMEFLPYHFL-----LATAS---EEGYLSWLDTSI--GKIVSDFSAKK 132 (315)
Q Consensus 71 ---~~~i~i~~~~~---~~~~~~~~~-~~-v~~~~~~~~~~~-----l~~~~---~d~~i~~~d~~~--~~~~~~~~~~~ 132 (315)
...|+.|.+-+ .....+... .. -.....++++.+ +++.+ ....+.+.|... ++ ...+....
T Consensus 212 ~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~ 290 (711)
T 4hvt_A 212 SLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQKINMPS 290 (711)
T ss_dssp TSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEECCSCT
T ss_pred CCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceEeecCC
Confidence 14688898732 122222222 22 234555666652 44433 224466777653 33 23332222
Q ss_pred CCeEEEEEcCCCCEEEEE----------cCCCeEEEEcCCCCc-------ceeE-ee-cccccEEEEEECCCCCEEEEee
Q psy9936 133 GKLSVMTQNPYNACICLG----------HRNGTVTMWSPTVQK-------PLAS-LL-CHKAGIQSVAVNHTGTYMATSA 193 (315)
Q Consensus 133 ~~v~~~~~~p~~~~l~~~----------~~d~~i~i~d~~~~~-------~~~~-~~-~~~~~i~~~~~sp~g~~l~~~~ 193 (315)
. . .+..++++.+++.. ...+.|...|+.++. .... +. .....+..+.|..+ .++++..
T Consensus 291 ~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~ 367 (711)
T 4hvt_A 291 D-A-TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATY 367 (711)
T ss_dssp T-C-EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEE
T ss_pred c-c-eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEE
Confidence 2 1 13344566555532 146778899887642 2222 32 23356778899876 4666666
Q ss_pred CCCc--EEEEEccCCCC-CeeE-eccC--CCceeEEEccCC
Q psy9936 194 GDSQ--LRIWDVRNLEG-PLNT-FRTR--TPINNLAFSQRG 228 (315)
Q Consensus 194 ~d~~--i~iwd~~~~~~-~~~~-~~~~--~~v~~~~~s~~g 228 (315)
.++. +.++++.++ . .... +... ..+.....++++
T Consensus 368 ~~~~~~l~~~~~~~g-~~~~~~~i~lp~~~~~~~~~~~~~~ 407 (711)
T 4hvt_A 368 DNVVAKVVTFTLENE-QWTKPVVLKLPYQNAIFGMSSYEEE 407 (711)
T ss_dssp ETTEEEEEEECEETT-EECCCEEECCCSTTCEEEEECCTTC
T ss_pred ECCEEEEEEEECCCC-ceEEEeccCCCCCeEEEEEeecCcC
Confidence 6664 677777655 3 2233 3222 235445555555
No 356
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=88.51 E-value=9.3 Score=31.41 Aligned_cols=152 Identities=11% Similarity=0.105 Sum_probs=84.2
Q ss_pred CCcEEEEE-EcC--CCCEEEEEcCCCeEEEEEccCce-------EEEEecCCCceeEEEEee-cCcEEEEEeCCeEEEEe
Q psy9936 10 QFGIYRMN-YTK--NGRHLLLGGKRGHVAAFDWVRKT-------LACEMNVMEEVYDIKWLH-LETMFAVAQKDWVYIYD 78 (315)
Q Consensus 10 ~~~v~~~~-~s~--~~~~l~~~~~dg~i~v~~~~~~~-------~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~i~i~~ 78 (315)
...|.++. +.+ +..++++.+.+|.++.-.+.... ....+...+.+..+.... +..+++.+..|.+..+.
T Consensus 94 ~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill~T~~G~~~rf~ 173 (327)
T 3uc1_A 94 EERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIRFS 173 (327)
T ss_dssp TCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEEEETTSEEEEEE
T ss_pred CCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEEEECCCeEEEEE
Confidence 45555553 332 46799999999999988765422 112233334454444433 45566667788877776
Q ss_pred CC--CC--------EEE--EeecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCCe-------EEEE--eccCCCCeEE
Q psy9936 79 NQ--GI--------ELH--CLKVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIGK-------IVSD--FSAKKGKLSV 137 (315)
Q Consensus 79 ~~--~~--------~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~-------~~~~--~~~~~~~v~~ 137 (315)
.. .- -.. .+.....|.++...+.+..++..+..|.++.-.+..-. -+.. +....+.+..
T Consensus 174 ~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~ 253 (327)
T 3uc1_A 174 ATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVG 253 (327)
T ss_dssp CCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEE
T ss_pred CcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEE
Confidence 54 21 111 12233567777666666688888899998888765321 1111 2121233444
Q ss_pred EEEcCCCCEEEEEcCCCeEEEEcC
Q psy9936 138 MTQNPYNACICLGHRNGTVTMWSP 161 (315)
Q Consensus 138 ~~~~p~~~~l~~~~~d~~i~i~d~ 161 (315)
+....+...++..+.+|.+.-++.
T Consensus 254 ~~~~~~~~~i~l~T~~G~~ir~~~ 277 (327)
T 3uc1_A 254 ALIVDDDSELYAVTSGGGVIRTAA 277 (327)
T ss_dssp EEEECTTCEEEEEEGGGCEEEEEG
T ss_pred EEEeCCCccEEEEcCCCeEEEEeh
Confidence 433333344555556666666654
No 357
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=83.18 E-value=9.1 Score=34.14 Aligned_cols=60 Identities=5% Similarity=-0.015 Sum_probs=42.3
Q ss_pred CeEEEEEcCCCCEEEEEcC------------CCeEEEEcCCCCcceeEeecc-cccEEEEEECCCCCEEEEee
Q psy9936 134 KLSVMTQNPYNACICLGHR------------NGTVTMWSPTVQKPLASLLCH-KAGIQSVAVNHTGTYMATSA 193 (315)
Q Consensus 134 ~v~~~~~~p~~~~l~~~~~------------d~~i~i~d~~~~~~~~~~~~~-~~~i~~~~~sp~g~~l~~~~ 193 (315)
....|.|.++|.+.+.... ...+..++..+++....+.+. ...++.++|+||++.|+++-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 4678999999987763321 226777788777655444432 35789999999999887763
No 358
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=83.03 E-value=17 Score=29.50 Aligned_cols=185 Identities=10% Similarity=0.093 Sum_probs=104.2
Q ss_pred cCCCCEEEEEcCCCeEEEEEccCceE-------EEE--ecCCCceeEEEEee-cCcEEEEEeCCeEEEEeCC---CCEEE
Q psy9936 19 TKNGRHLLLGGKRGHVAAFDWVRKTL-------ACE--MNVMEEVYDIKWLH-LETMFAVAQKDWVYIYDNQ---GIELH 85 (315)
Q Consensus 19 s~~~~~l~~~~~dg~i~v~~~~~~~~-------~~~--~~~~~~v~~~~~~~-~~~~l~~~~~~~i~i~~~~---~~~~~ 85 (315)
-|+..++++.+.+|.|+--.+...+. ... +...+.+..+.... ...+++.+..|.++-+... .....
T Consensus 5 i~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 5 MQKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp ---CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred cCCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence 35667888889999998876653321 111 22333444444443 3456666667876666542 11000
Q ss_pred ----------EeecCCceEEEEEcC---CCceEEEEcCCCeEEEEEccC-------CeEEEEeccCCCCeEEEEEcCCCC
Q psy9936 86 ----------CLKVLNKVTRMEFLP---YHFLLATASEEGYLSWLDTSI-------GKIVSDFSAKKGKLSVMTQNPYNA 145 (315)
Q Consensus 86 ----------~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~~~d~~~-------~~~~~~~~~~~~~v~~~~~~p~~~ 145 (315)
.+.....|.++...+ +..+++..+..|.++...+.. |.....+.. ...+..+.......
T Consensus 85 ~~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~ 163 (312)
T 1suu_A 85 SKGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDE 163 (312)
T ss_dssp ---CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTC
T ss_pred CCCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCC
Confidence 122224455554333 356788889999998887743 222223333 34455554444455
Q ss_pred EEEEEcCCCeEEEEcCCC---------CcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccC
Q psy9936 146 CICLGHRNGTVTMWSPTV---------QKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRN 205 (315)
Q Consensus 146 ~l~~~~~d~~i~i~d~~~---------~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~ 205 (315)
.++..+.+|.+..+.... |.....+. ....|..+...+++..+++.+..|..+...+..
T Consensus 164 ~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~-~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 164 KVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLK-EGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCC-TTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred EEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeC-CCCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 677788889888887542 11122222 234566665555667788889999998888854
No 359
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=82.69 E-value=7.8 Score=37.14 Aligned_cols=40 Identities=10% Similarity=0.033 Sum_probs=34.4
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN 49 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~ 49 (315)
...+.+++..++..++++-+.|+++++|++.+++++.+..
T Consensus 235 ~~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 235 PNTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp TTCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred cceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 3457788888888999999999999999999999887754
No 360
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=82.66 E-value=6.5 Score=35.28 Aligned_cols=58 Identities=3% Similarity=-0.020 Sum_probs=41.6
Q ss_pred eEEEEEcCCCCEEEEEcCC------------CeEEEEcCCCCcceeEeecc-cccEEEEEECCCCCEEEEe
Q psy9936 135 LSVMTQNPYNACICLGHRN------------GTVTMWSPTVQKPLASLLCH-KAGIQSVAVNHTGTYMATS 192 (315)
Q Consensus 135 v~~~~~~p~~~~l~~~~~d------------~~i~i~d~~~~~~~~~~~~~-~~~i~~~~~sp~g~~l~~~ 192 (315)
.-.|+|+|.|++++.-..+ ..+.+.+..+++...-+.++ ...++.++|+||++.|++.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 5679999999966654322 35677777777655555443 4689999999999987665
No 361
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=81.53 E-value=38 Score=32.42 Aligned_cols=38 Identities=3% Similarity=-0.024 Sum_probs=32.3
Q ss_pred CeEEEEEcCCCCEEEEEcCCCeEEEEcCCCCcceeEee
Q psy9936 134 KLSVMTQNPYNACICLGHRNGTVTMWSPTVQKPLASLL 171 (315)
Q Consensus 134 ~v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 171 (315)
.+.+++..++..++++-+.|+++++|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 46677788888899999999999999999998877653
No 362
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=77.63 E-value=11 Score=33.73 Aligned_cols=58 Identities=12% Similarity=0.126 Sum_probs=40.6
Q ss_pred eEEEEEcCCCceEEEEcCC------------CeEEEEEccCCeEEEEeccCC-CCeEEEEEcCCCCEEEEE
Q psy9936 93 VTRMEFLPYHFLLATASEE------------GYLSWLDTSIGKIVSDFSAKK-GKLSVMTQNPYNACICLG 150 (315)
Q Consensus 93 v~~~~~~~~~~~l~~~~~d------------~~i~~~d~~~~~~~~~~~~~~-~~v~~~~~~p~~~~l~~~ 150 (315)
.=.|.|+|.|.++++-..+ ..+.+.+..+++..+-+..+. ..++.++|+||++.|++.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4568999999866654322 236666777777666555543 469999999999987765
No 363
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=76.05 E-value=34 Score=28.74 Aligned_cols=181 Identities=9% Similarity=0.035 Sum_probs=105.4
Q ss_pred cEEEEEEcCCCCEEEEEcC---------------CCeEEEEEccCc--eEEEEecCC-------CceeEEEEe---ec--
Q psy9936 12 GIYRMNYTKNGRHLLLGGK---------------RGHVAAFDWVRK--TLACEMNVM-------EEVYDIKWL---HL-- 62 (315)
Q Consensus 12 ~v~~~~~s~~~~~l~~~~~---------------dg~i~v~~~~~~--~~~~~~~~~-------~~v~~~~~~---~~-- 62 (315)
.|..+...+++++-+.-+. .-.|.+||+.++ ++++.+... ..+..+.+. |+
T Consensus 88 sV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~ 167 (381)
T 3q6k_A 88 SIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGD 167 (381)
T ss_dssp CEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTT
T ss_pred EeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCC
Confidence 4677777777765443111 125889999999 888776532 236777776 22
Q ss_pred --CcEEEEEe--CCeEEEEeCCCCEEEEeec--------------------CCceEEEEEcCC----CceEEEEcCCC-e
Q psy9936 63 --ETMFAVAQ--KDWVYIYDNQGIELHCLKV--------------------LNKVTRMEFLPY----HFLLATASEEG-Y 113 (315)
Q Consensus 63 --~~~l~~~~--~~~i~i~~~~~~~~~~~~~--------------------~~~v~~~~~~~~----~~~l~~~~~d~-~ 113 (315)
+.++..+. .+.|.++|+.......+.| ...+..++++|+ ++.|+.....+ .
T Consensus 168 c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ 247 (381)
T 3q6k_A 168 CSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIK 247 (381)
T ss_dssp SCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSE
T ss_pred CCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCc
Confidence 34444443 5689999986544433332 136778888887 66666665443 2
Q ss_pred EEEEE---ccCC---eEEEEeccC--CCCeEEEEEc-CCCCEEEEEcCCCeEEEEcCCC-C---cceeEeec--ccccEE
Q psy9936 114 LSWLD---TSIG---KIVSDFSAK--KGKLSVMTQN-PYNACICLGHRNGTVTMWSPTV-Q---KPLASLLC--HKAGIQ 178 (315)
Q Consensus 114 i~~~d---~~~~---~~~~~~~~~--~~~v~~~~~~-p~~~~l~~~~~d~~i~i~d~~~-~---~~~~~~~~--~~~~i~ 178 (315)
++-.. ++.. ..+..+-.. ...-..+++. .+|.++++--....|..|+..+ . .....+.. .-..+.
T Consensus 248 ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd 327 (381)
T 3q6k_A 248 VYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGT 327 (381)
T ss_dssp EEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEE
T ss_pred EEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccC
Confidence 33332 1121 112222111 1234456775 6787787778889999999875 1 12222221 123577
Q ss_pred EEEECCCCCEEEEe
Q psy9936 179 SVAVNHTGTYMATS 192 (315)
Q Consensus 179 ~~~~sp~g~~l~~~ 192 (315)
.+.+.++|.+.++.
T Consensus 328 ~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 328 DISVDSKGGLWFMS 341 (381)
T ss_dssp EEEECTTSCEEEEE
T ss_pred eEEECCCCeEEEEE
Confidence 88887777655554
No 364
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=73.20 E-value=18 Score=32.22 Aligned_cols=59 Identities=17% Similarity=0.074 Sum_probs=30.2
Q ss_pred CcEEEEEEcCCCCEEEEEcCC------------CeEEEEEccCceEEEEecC--CCceeEEEEeecCcEEEEE
Q psy9936 11 FGIYRMNYTKNGRHLLLGGKR------------GHVAAFDWVRKTLACEMNV--MEEVYDIKWLHLETMFAVA 69 (315)
Q Consensus 11 ~~v~~~~~s~~~~~l~~~~~d------------g~i~v~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~ 69 (315)
..+..|.|+++|.+.+..... ..+..++..++++...+.. ...++.++|+||++.|.++
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 345678888888766532111 1344445445554443331 2345666666665555443
No 365
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=70.36 E-value=10 Score=37.14 Aligned_cols=37 Identities=3% Similarity=-0.025 Sum_probs=30.2
Q ss_pred eEEEEEcCCCCEEEEEcCCCeEEEEcCCCCcceeEee
Q psy9936 135 LSVMTQNPYNACICLGHRNGTVTMWSPTVQKPLASLL 171 (315)
Q Consensus 135 v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 171 (315)
+.+++..++..++++-+.|+++++|++.+++++.+..
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 3445566778899999999999999999998877654
No 366
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=67.36 E-value=45 Score=26.46 Aligned_cols=151 Identities=14% Similarity=0.069 Sum_probs=83.2
Q ss_pred CCcEEEEEEcC-CCCEEEEEcCCCeEEEEEccCce------EEEEecCCCceeEEEEeec-CcEEEEEeCCeEEEEeCC-
Q psy9936 10 QFGIYRMNYTK-NGRHLLLGGKRGHVAAFDWVRKT------LACEMNVMEEVYDIKWLHL-ETMFAVAQKDWVYIYDNQ- 80 (315)
Q Consensus 10 ~~~v~~~~~s~-~~~~l~~~~~dg~i~v~~~~~~~------~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~i~i~~~~- 80 (315)
.+.|..+.... +..++++.+.+|.++...+.... ....+...+.+..+..... ..+++.+..|.++.+...
T Consensus 67 ~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~e 146 (276)
T 3no0_A 67 EEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVRE 146 (276)
T ss_dssp TCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGG
T ss_pred CCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhh
Confidence 45566664421 46788899999999998875532 1222333344555544433 456666678888777641
Q ss_pred ----C---CEEE--EeecCCceEEEEEcCCCceEEEEcCCCeEEEEEccCC-------eEEEEeccCCCCeEEEEEcCCC
Q psy9936 81 ----G---IELH--CLKVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSIG-------KIVSDFSAKKGKLSVMTQNPYN 144 (315)
Q Consensus 81 ----~---~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~-------~~~~~~~~~~~~v~~~~~~p~~ 144 (315)
+ .-.. .+.....|..+...+++..++..+..|.++...+..- +-+..+ ...+.+..+....+.
T Consensus 147 ip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~ 225 (276)
T 3no0_A 147 VPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEE 225 (276)
T ss_dssp SCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSE
T ss_pred CCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCC
Confidence 1 1111 1233356666655556667888888999888876532 122222 122334433322233
Q ss_pred CEEEEEcCCCeEEE--EcC
Q psy9936 145 ACICLGHRNGTVTM--WSP 161 (315)
Q Consensus 145 ~~l~~~~~d~~i~i--~d~ 161 (315)
..++..+.+|.+.. ++.
T Consensus 226 ~~i~~~t~~G~~ir~~~~~ 244 (276)
T 3no0_A 226 VELLITTKNGKAFYDKINQ 244 (276)
T ss_dssp EEEEEEETTSCEEEEEEEG
T ss_pred CEEEEEcCCCeEEEeeeCH
Confidence 34555556666655 554
No 367
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=65.67 E-value=52 Score=26.57 Aligned_cols=184 Identities=11% Similarity=0.036 Sum_probs=98.9
Q ss_pred CCCCEEEEEcCCCeEEEEEccCceEEE---------EecCCCceeEEEEee-cCcEEEEEeCCeEEEEeC---C------
Q psy9936 20 KNGRHLLLGGKRGHVAAFDWVRKTLAC---------EMNVMEEVYDIKWLH-LETMFAVAQKDWVYIYDN---Q------ 80 (315)
Q Consensus 20 ~~~~~l~~~~~dg~i~v~~~~~~~~~~---------~~~~~~~v~~~~~~~-~~~~l~~~~~~~i~i~~~---~------ 80 (315)
|+..++++.+.+|.|+--.+.+.+... .+...+.+..+.... ...+++.+..|.++-+.. .
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a 80 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGA 80 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCC
Confidence 455678888899998877665432211 122223343333333 455666667787665543 1
Q ss_pred -CCEEE---EeecCCceEEEEEc---CCCceEEEEcCCCeEEEEEccC-------CeEEEEeccCCCCeEEEEEcCCCCE
Q psy9936 81 -GIELH---CLKVLNKVTRMEFL---PYHFLLATASEEGYLSWLDTSI-------GKIVSDFSAKKGKLSVMTQNPYNAC 146 (315)
Q Consensus 81 -~~~~~---~~~~~~~v~~~~~~---~~~~~l~~~~~d~~i~~~d~~~-------~~~~~~~~~~~~~v~~~~~~p~~~~ 146 (315)
|..+. .+.....|.++... .++.+++..+.+|.++-..+.. |.....+..+ +.+..+........
T Consensus 81 ~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~ 159 (307)
T 1zi0_A 81 RGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDE 159 (307)
T ss_dssp CCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCE
T ss_pred CCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCE
Confidence 11100 12233456555432 2456788889999999887752 2222223333 34444444344455
Q ss_pred EEEEcCCCeEEEEcCCC---------CcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccC
Q psy9936 147 ICLGHRNGTVTMWSPTV---------QKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRN 205 (315)
Q Consensus 147 l~~~~~d~~i~i~d~~~---------~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~ 205 (315)
++..+.+|.+..+.... |.....+. ....|.++...+++..+++.+..|.++-.++..
T Consensus 160 i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e 226 (307)
T 1zi0_A 160 VMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLG-EGDKVVSLIVPRGDGAILTATQNGYGKRTAVAE 226 (307)
T ss_dssp EEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEECCCSSCEEEEEETTSEEEEECGGG
T ss_pred EEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeC-CCCEEEEEEEecCCCEEEEEEcCCceEEEEHHH
Confidence 66677788777776432 11111222 234566665555566788889999988887753
No 368
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=64.84 E-value=51 Score=26.16 Aligned_cols=192 Identities=9% Similarity=-0.003 Sum_probs=104.4
Q ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEE---EccCceEEEEecCCCceeEEEEee--cCcEE-EEEeCCeEEEEeCCCC--
Q psy9936 11 FGIYRMNYTKNGRHLLLGGKRGHVAAF---DWVRKTLACEMNVMEEVYDIKWLH--LETMF-AVAQKDWVYIYDNQGI-- 82 (315)
Q Consensus 11 ~~v~~~~~s~~~~~l~~~~~dg~i~v~---~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l-~~~~~~~i~i~~~~~~-- 82 (315)
+.+..+.......+|+.-+..|.++-- ++..+.....+...+.|..+.. + +..++ ..+.+|.++-..+...
T Consensus 24 D~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~ 102 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKSREEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEY 102 (276)
T ss_dssp CCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSSTTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTT
T ss_pred CeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCCCCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhh
Confidence 445455444444556666677766543 3332221111444556666643 3 33444 4455899988876321
Q ss_pred ---EEE--EeecCCceEEEEEcCCCceEEEEcCCCeEEEEEccC---------CeEEEEeccCCCCeEEEEEcCCCCEEE
Q psy9936 83 ---ELH--CLKVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSI---------GKIVSDFSAKKGKLSVMTQNPYNACIC 148 (315)
Q Consensus 83 ---~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~---------~~~~~~~~~~~~~v~~~~~~p~~~~l~ 148 (315)
-.. .+.....+..+........++..+..|.+..+.... |.....+.. ...|..+...+++..++
T Consensus 103 ~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~-~d~vv~~~~~~~~~~ll 181 (276)
T 3no0_A 103 KAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEK-NDETSGLRIWNGEPYLL 181 (276)
T ss_dssp CSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEEEESSCSEEE
T ss_pred hcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCC-CCEEEEEEEeCCCCEEE
Confidence 111 133345666666555566788888899988887542 222222322 24465555445566788
Q ss_pred EEcCCCeEEEEcCCC-------CcceeEeecccccEEEEEECCCCCEEEEeeCCCcEEE--EEccC
Q psy9936 149 LGHRNGTVTMWSPTV-------QKPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRI--WDVRN 205 (315)
Q Consensus 149 ~~~~d~~i~i~d~~~-------~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~i--wd~~~ 205 (315)
..+..|.++...+.. ++-+..+. ..+.+..+....+...++..+.+|.+.. ++...
T Consensus 182 ~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~-~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 182 VITAKGRVKKISHEEIPKTNRGVKGTEVSG-TKDTLVDLIPIKEEVELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp EEETTSCEEEEEGGGSCCCCTTCCCEECCC-SSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGGG
T ss_pred EEeCCCcEEEeEHHHcccCCCCCcceEEEc-CCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHHH
Confidence 888889888876532 22233332 2334444433333445666677777776 77654
No 369
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=64.17 E-value=58 Score=26.57 Aligned_cols=185 Identities=6% Similarity=-0.001 Sum_probs=101.0
Q ss_pred CCCCEEEEEcCCCeEEEEEccCce----EEEEecCCCceeEEEEee-cCcEEEEEeCCeEEEEeC---C-------CCEE
Q psy9936 20 KNGRHLLLGGKRGHVAAFDWVRKT----LACEMNVMEEVYDIKWLH-LETMFAVAQKDWVYIYDN---Q-------GIEL 84 (315)
Q Consensus 20 ~~~~~l~~~~~dg~i~v~~~~~~~----~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~i~i~~~---~-------~~~~ 84 (315)
|+..++++.+.+|.|+--.+...+ ....+...+.+..+.... ...+++.++.|.++-+.. . |..+
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i 82 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHI 82 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEG
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCCCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcCh
Confidence 566788888999998877654221 111222333444443333 456666777787666543 1 1110
Q ss_pred ---EEeecCCceEEEEEcCC---CceEEEEcCCCeEEEEEccC--------CeEEEEeccCCCCeEEEEEcCCCCEEEEE
Q psy9936 85 ---HCLKVLNKVTRMEFLPY---HFLLATASEEGYLSWLDTSI--------GKIVSDFSAKKGKLSVMTQNPYNACICLG 150 (315)
Q Consensus 85 ---~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~~~d~~~--------~~~~~~~~~~~~~v~~~~~~p~~~~l~~~ 150 (315)
..+.....|.++..-++ +.+++.++.+|.++-..+.. |.....+... +.+..+........++..
T Consensus 83 ~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~-d~lv~~~~~~~~~~i~l~ 161 (323)
T 1wp5_A 83 ANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKND-DQVVDVHLTDGMNELFLV 161 (323)
T ss_dssp GGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTT-CCEEEEEEECSCSEEEEE
T ss_pred hhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCC-CEEEEEEEeCCCCEEEEE
Confidence 01222345555433332 56788899999999988742 2222223322 444444444445567777
Q ss_pred cCCCeEEEEcCCC----C---cceeEeec-ccccEEEEEECCCCC-EEEEeeCCCcEEEEEccC
Q psy9936 151 HRNGTVTMWSPTV----Q---KPLASLLC-HKAGIQSVAVNHTGT-YMATSAGDSQLRIWDVRN 205 (315)
Q Consensus 151 ~~d~~i~i~d~~~----~---~~~~~~~~-~~~~i~~~~~sp~g~-~l~~~~~d~~i~iwd~~~ 205 (315)
+.+|.+..+.... + +-+.-+.- ....|.++...+++. .|++.+..|..+..++..
T Consensus 162 T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 162 THNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp ETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred eCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 7888887776432 1 11221211 234455554434444 788888898888877754
No 370
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=63.47 E-value=6.6 Score=38.51 Aligned_cols=38 Identities=11% Similarity=0.064 Sum_probs=32.0
Q ss_pred cEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec
Q psy9936 12 GIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN 49 (315)
Q Consensus 12 ~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~ 49 (315)
.+.+++..++..++++-+.|++++||++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 44566677788899999999999999999999887754
No 371
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=62.40 E-value=32 Score=22.96 Aligned_cols=18 Identities=6% Similarity=-0.180 Sum_probs=8.8
Q ss_pred CCEEEEEcCCCeEEEEEc
Q psy9936 22 GRHLLLGGKRGHVAAFDW 39 (315)
Q Consensus 22 ~~~l~~~~~dg~i~v~~~ 39 (315)
+.+.+.-..||.+.+|+.
T Consensus 24 g~~~L~~q~dGNLvL~~~ 41 (113)
T 3mez_B 24 RDYSLVMRDDCNLVLTKG 41 (113)
T ss_dssp TTEEEEECTTSCEEEEET
T ss_pred CCEEEEEcCCCEEEEEEC
Confidence 344444445555555553
No 372
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=58.87 E-value=19 Score=33.10 Aligned_cols=36 Identities=19% Similarity=0.204 Sum_probs=29.1
Q ss_pred cEEEEEEcCCCCEEEEEcCCCeEEEEEccCceEEEEec
Q psy9936 12 GIYRMNYTKNGRHLLLGGKRGHVAAFDWVRKTLACEMN 49 (315)
Q Consensus 12 ~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~ 49 (315)
.|.++.+ +..++++-+.|+++++|++.+++++....
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 4555544 46799999999999999999999887765
No 373
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=54.23 E-value=20 Score=32.96 Aligned_cols=35 Identities=11% Similarity=0.114 Sum_probs=27.9
Q ss_pred eEEEEEcCCCCEEEEEcCCCeEEEEcCCCCcceeEee
Q psy9936 135 LSVMTQNPYNACICLGHRNGTVTMWSPTVQKPLASLL 171 (315)
Q Consensus 135 v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 171 (315)
|.++.+ +..++++-+.|.++++|++++++++.+..
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 444443 46799999999999999999998777665
No 374
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=50.42 E-value=1.1e+02 Score=25.60 Aligned_cols=217 Identities=12% Similarity=0.052 Sum_probs=121.6
Q ss_pred cEEEEEE-cCCCCEEEEEcC--C---CeEEEEEcc--------CceEEEEec------CCCceeEEEEeecCcEEEEEeC
Q psy9936 12 GIYRMNY-TKNGRHLLLGGK--R---GHVAAFDWV--------RKTLACEMN------VMEEVYDIKWLHLETMFAVAQK 71 (315)
Q Consensus 12 ~v~~~~~-s~~~~~l~~~~~--d---g~i~v~~~~--------~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~ 71 (315)
-+..++. +.+++.+++--. + -++-..+.. ++.++.-+. .--.|..+...+.+++-+.-..
T Consensus 27 ~P~gv~vd~~~gRiFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p~ll~PYP~w~~~~~lvsV~~v~iD~~~rLWVLDtG 106 (381)
T 3q6k_A 27 ISTAFAYDAEGEKLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSPLLNKFSGHKTGKELTSIYQPVIDDCRRLWVVDIG 106 (381)
T ss_dssp CCCEEEEETTTTEEEEECCTTSTTCSCSEEEEEHHHHTTCTTCSSCCBEECTTCSSSCSSSCEEEEEECTTCEEEEEECS
T ss_pred ceeeeeeecCCCcEEEEeCCCCCCCCcEEEEEeCCCCcccccCCcccccCCCCCccccceEEeeEEEEcCCCcEEEEeCC
Confidence 3567888 688887776532 2 245555533 122213332 1235777777777776664321
Q ss_pred ----------------CeEEEEeCCC---CEEEEeec-------CCceEEEEEc---CC----CceEEEE-cCCCeEEEE
Q psy9936 72 ----------------DWVYIYDNQG---IELHCLKV-------LNKVTRMEFL---PY----HFLLATA-SEEGYLSWL 117 (315)
Q Consensus 72 ----------------~~i~i~~~~~---~~~~~~~~-------~~~v~~~~~~---~~----~~~l~~~-~~d~~i~~~ 117 (315)
-.|.+||+.+ +.++.+.. ...+..+.+. |. +.+++.+ +..+.|.+|
T Consensus 107 ~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVy 186 (381)
T 3q6k_A 107 SVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIY 186 (381)
T ss_dssp SCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEE
T ss_pred CcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEE
Confidence 1588999954 45555432 1457788887 22 3344444 346779999
Q ss_pred EccCCeEEEEec----cC--------------CCCeEEEEEcCC----CCEEEEEcCCC-eEEEEc---CCCC---ccee
Q psy9936 118 DTSIGKIVSDFS----AK--------------KGKLSVMTQNPY----NACICLGHRNG-TVTMWS---PTVQ---KPLA 168 (315)
Q Consensus 118 d~~~~~~~~~~~----~~--------------~~~v~~~~~~p~----~~~l~~~~~d~-~i~i~d---~~~~---~~~~ 168 (315)
|+.+++.-+.+. .. ...+..|+++|+ ++.|+.....+ .+.-.. +++. ..+.
T Consensus 187 dl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~ 266 (381)
T 3q6k_A 187 DHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPE 266 (381)
T ss_dssp ETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCE
T ss_pred ECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceE
Confidence 999886544431 00 135788999998 67776665443 232222 2222 1222
Q ss_pred Eeeccc---ccEEEEEEC-CCCCEEEEeeCCCcEEEEEccC-CC--CCeeEeccCC---CceeEEEccCCe
Q psy9936 169 SLLCHK---AGIQSVAVN-HTGTYMATSAGDSQLRIWDVRN-LE--GPLNTFRTRT---PINNLAFSQRGL 229 (315)
Q Consensus 169 ~~~~~~---~~i~~~~~s-p~g~~l~~~~~d~~i~iwd~~~-~~--~~~~~~~~~~---~v~~~~~s~~g~ 229 (315)
.+ +.. +.-..++.. .+|.++++--..+.|..|+..+ .- .....+.... -+..+.+.++|.
T Consensus 267 ~~-G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~ 336 (381)
T 3q6k_A 267 LL-GNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGG 336 (381)
T ss_dssp EE-EECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSC
T ss_pred Ee-eecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCe
Confidence 22 222 233456775 6787777777888999999876 20 1223332222 257777877774
No 375
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=42.74 E-value=1.2e+02 Score=23.69 Aligned_cols=138 Identities=14% Similarity=0.027 Sum_probs=72.7
Q ss_pred EEEEEcCCCeEEEEEccCceE-EEEecCCCceeEEEEe-ecCcEEEEEeCCeEEEEeCC--------CCEE---EEeecC
Q psy9936 24 HLLLGGKRGHVAAFDWVRKTL-ACEMNVMEEVYDIKWL-HLETMFAVAQKDWVYIYDNQ--------GIEL---HCLKVL 90 (315)
Q Consensus 24 ~l~~~~~dg~i~v~~~~~~~~-~~~~~~~~~v~~~~~~-~~~~~l~~~~~~~i~i~~~~--------~~~~---~~~~~~ 90 (315)
.+++.+.+|.|+--....... ...+...+.+..+... ....+++.+..|.++-+... +..+ ..+...
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~~~~~lke~D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~~~ 83 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPPG 83 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCSTTSCCCTTCCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCCTT
T ss_pred EEEEEeCCCEEEEeeCCcCCceeccCCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCCCC
Confidence 345556677666554332110 0112223344444333 34566777777876665431 1110 012223
Q ss_pred CceEEEEEcCCCceEEEEcCCCeEEEEEccC-------CeEEEEeccCCCCeEEEEEc-CCCCEEEEEcCCCeEEEEcCC
Q psy9936 91 NKVTRMEFLPYHFLLATASEEGYLSWLDTSI-------GKIVSDFSAKKGKLSVMTQN-PYNACICLGHRNGTVTMWSPT 162 (315)
Q Consensus 91 ~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~-------~~~~~~~~~~~~~v~~~~~~-p~~~~l~~~~~d~~i~i~d~~ 162 (315)
..|.++....++.+|+.++..|.++...+.. +.....+... ..+..+... ..+..++..+.+|.+..+...
T Consensus 84 e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~-d~lv~~~~~~~~~~~i~l~T~~G~~lrf~~~ 162 (256)
T 1zvt_A 84 ATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPEN-AHVMPPVVIEDASDMLLAITQAGRMLMFPVS 162 (256)
T ss_dssp CCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTT-CCBCCCEECCCTTCEEEEEETTSEEEEEEGG
T ss_pred CEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCC-CEEEEEEEecCCCCEEEEEcCCCeEEEEEHH
Confidence 5666664434566788889999999888743 2333333322 334444444 344567777888888888764
No 376
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=41.19 E-value=1.6e+02 Score=24.59 Aligned_cols=187 Identities=11% Similarity=0.051 Sum_probs=0.0
Q ss_pred EEEcCCCCEEEEEcCCCeEEEEEccC---------ceEEEEecCCCceeEEEEeecCc-EEEEEeCCeEEEEeCCC----
Q psy9936 16 MNYTKNGRHLLLGGKRGHVAAFDWVR---------KTLACEMNVMEEVYDIKWLHLET-MFAVAQKDWVYIYDNQG---- 81 (315)
Q Consensus 16 ~~~s~~~~~l~~~~~dg~i~v~~~~~---------~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~i~i~~~~~---- 81 (315)
+.+-|+..++++.+.+|.|+--.+.. +.....+...+.+..+....... +++.++.|.++-+....
T Consensus 1 ~dlI~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~ 80 (370)
T 3l6v_A 1 MDLIAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEA 80 (370)
T ss_dssp CCCCCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBC
T ss_pred CCcccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCC
Q ss_pred ---------CEEEEeecCCceEEEEEcC---CCceEEEEcCCCeEEEEEc-------cCCeEEEEeccCCCCeEEEEEcC
Q psy9936 82 ---------IELHCLKVLNKVTRMEFLP---YHFLLATASEEGYLSWLDT-------SIGKIVSDFSAKKGKLSVMTQNP 142 (315)
Q Consensus 82 ---------~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~~~d~-------~~~~~~~~~~~~~~~v~~~~~~p 142 (315)
..+..+.....|.++.... .+.+|+.++..|.++...+ ..|.....+.. ...+..+....
T Consensus 81 ~r~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~ 159 (370)
T 3l6v_A 81 GSNARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTD 159 (370)
T ss_dssp CTTSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEEC
T ss_pred CcccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeC
Q ss_pred CCCEEEEEcCCCeEEEEcCC---------CCcceeEeecccccEEEEEECC-----------------------------
Q psy9936 143 YNACICLGHRNGTVTMWSPT---------VQKPLASLLCHKAGIQSVAVNH----------------------------- 184 (315)
Q Consensus 143 ~~~~l~~~~~d~~i~i~d~~---------~~~~~~~~~~~~~~i~~~~~sp----------------------------- 184 (315)
....++..+.+|.+..+... .|-....+. ....|.++...+
T Consensus 160 ~~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~-~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~ 238 (370)
T 3l6v_A 160 GDRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLA-KGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVI 238 (370)
T ss_dssp SCCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEECCC---------------------------
T ss_pred CCceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeC-CCCEEEEEEEecccccccccccccccccccccccccccccc
Q ss_pred ------CCCEEEEeeCCCcEEEEEcc
Q psy9936 185 ------TGTYMATSAGDSQLRIWDVR 204 (315)
Q Consensus 185 ------~g~~l~~~~~d~~i~iwd~~ 204 (315)
++..+++.+..|..+...+.
T Consensus 239 ~~~~~~~~~~il~vTe~G~gKrt~~~ 264 (370)
T 3l6v_A 239 DVADNGDVAYILTATENGYGKRTPLA 264 (370)
T ss_dssp --------CEEEEEETTSEEEEEEGG
T ss_pred ccccccCCceEEEeeCCCCEEEEEHH
No 377
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=40.55 E-value=77 Score=20.92 Aligned_cols=17 Identities=0% Similarity=0.044 Sum_probs=8.0
Q ss_pred CCEEEEEcCCCeEEEEE
Q psy9936 22 GRHLLLGGKRGHVAAFD 38 (315)
Q Consensus 22 ~~~l~~~~~dg~i~v~~ 38 (315)
|.+.+.-..||.+.+++
T Consensus 20 g~~~L~~q~dGnLvl~~ 36 (111)
T 3mez_A 20 ESAAFVMQGDCNLVLYN 36 (111)
T ss_dssp TTEEEEECTTSCEEEEC
T ss_pred CCEEEEEccCCeEEEEC
Confidence 34444444455555554
No 378
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=38.12 E-value=1.6e+02 Score=23.76 Aligned_cols=152 Identities=11% Similarity=0.018 Sum_probs=83.3
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEccC---c------eE---EEEecCCCceeEEEEe----ecCcEEEEEeCCe
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWVR---K------TL---ACEMNVMEEVYDIKWL----HLETMFAVAQKDW 73 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~---~------~~---~~~~~~~~~v~~~~~~----~~~~~l~~~~~~~ 73 (315)
.+.+..+........++..+..|.++-+.... . .. ...+...+.|..+... ++..++.++..|.
T Consensus 46 ~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~ 125 (312)
T 1suu_A 46 GDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRASKGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGK 125 (312)
T ss_dssp TCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-------CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSE
T ss_pred CCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccCCCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCe
Confidence 34444444444455666667778766665431 1 10 0012233445554333 2344566666888
Q ss_pred EEEEeCCC------CEEEE--eecCCceEEEEEcCCCceEEEEcCCCeEEEEEccC---------CeEEEEeccCCCCeE
Q psy9936 74 VYIYDNQG------IELHC--LKVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSI---------GKIVSDFSAKKGKLS 136 (315)
Q Consensus 74 i~i~~~~~------~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~---------~~~~~~~~~~~~~v~ 136 (315)
++...+.. .-... +.....+..+........++..+.+|.+..+.... |.....+.. ...+.
T Consensus 126 ~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv 204 (312)
T 1suu_A 126 IARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFV 204 (312)
T ss_dssp EEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEE
T ss_pred EEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEE
Confidence 88877621 11111 22335566555554456777888899988888753 112222322 34456
Q ss_pred EEEEcCCCCEEEEEcCCCeEEEEcCC
Q psy9936 137 VMTQNPYNACICLGHRNGTVTMWSPT 162 (315)
Q Consensus 137 ~~~~~p~~~~l~~~~~d~~i~i~d~~ 162 (315)
.+..-+++..+++.+..|......+.
T Consensus 205 ~~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 205 KVLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp EEEECTTCSEEEEEETTSEEEEEEGG
T ss_pred EEEEECCCCeEEEEECCCceEEEEHH
Confidence 66554556677788888988888764
No 379
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=35.29 E-value=1.4e+02 Score=23.26 Aligned_cols=31 Identities=13% Similarity=0.143 Sum_probs=20.8
Q ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEcc
Q psy9936 10 QFGIYRMNYTKNGRHLLLGGKRGHVAAFDWV 40 (315)
Q Consensus 10 ~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~ 40 (315)
.+.|.++....++.+|+.++..|.++...+.
T Consensus 83 ~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~ 113 (256)
T 1zvt_A 83 GATVDHMLMESDDQKLLMASDAGYGFVCTFN 113 (256)
T ss_dssp TCCEEEEECCCTTCEEEEEBTTSEEEEEEGG
T ss_pred CCEEEEEEEeCCCCEEEEEeCCCeEEEeEHH
Confidence 5566666443455677778888888877764
No 380
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=32.27 E-value=2.2e+02 Score=23.78 Aligned_cols=182 Identities=9% Similarity=0.021 Sum_probs=0.0
Q ss_pred EEEEEcCCCCEEEEE---cCCCeEEEEEccCceEEEEecCCCceeEEEEeecCcEEEEEeCCeEEEE-------------
Q psy9936 14 YRMNYTKNGRHLLLG---GKRGHVAAFDWVRKTLACEMNVMEEVYDIKWLHLETMFAVAQKDWVYIY------------- 77 (315)
Q Consensus 14 ~~~~~s~~~~~l~~~---~~dg~i~v~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~------------- 77 (315)
.++++..+|+.++-| ...|.+-.-..........+.....|..++ ......++...+|.|+.|
T Consensus 138 hs~al~~~G~v~~wG~~~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va-~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~ 216 (423)
T 3mvd_K 138 HSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIA-SGADHLVILTTAGKVFTVGCAEQGQLGRLSE 216 (423)
T ss_dssp EEEEEETTSCEEEEECEECSSSEEESBTTBCEEEEEESSTTCCEEEEE-ECSSEEEEEETTSCEEEEECCTTSTTSSCCT
T ss_pred eEEEEeCCCeEEEEeCCCCCCCCcCcCCCCCCceeeEecCCCcEEEEe-cCCCeEEEEecCCeEEEeeCCcCCccCCCcc
Q ss_pred ------------eCCCCEEEEeecCCceEEEEEcCCCceEEEEcCCCeEEEE-----------EccCCeEEEEeccCCCC
Q psy9936 78 ------------DNQGIELHCLKVLNKVTRMEFLPYHFLLATASEEGYLSWL-----------DTSIGKIVSDFSAKKGK 134 (315)
Q Consensus 78 ------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~-----------d~~~~~~~~~~~~~~~~ 134 (315)
+........+.....|..++.. ....++.-..++.|+.| +................
T Consensus 217 ~~~~~~~~~~~~~~~~p~~v~~~~~~~v~~i~~g-~~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~~~~ 295 (423)
T 3mvd_K 217 RSISGEGRRGKRDLLRPTQLIITRAKPFEAIWAT-NYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKD 295 (423)
T ss_dssp TTTTSCSTTTTTTTSSCEEECCTTCCCEEEEEEE-TTEEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEECCCS
T ss_pred cccccccccccccccCCeEEeecCCccEEEEEEC-CcEEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcCCCC
Q ss_pred eEEEEEcCCCCEEEEEcCCCeEEEEcCCCC------------cceeEeecccccEEEEEECCCCCEEEEeeCCCcEEEE
Q psy9936 135 LSVMTQNPYNACICLGHRNGTVTMWSPTVQ------------KPLASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIW 201 (315)
Q Consensus 135 v~~~~~~p~~~~l~~~~~d~~i~i~d~~~~------------~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iw 201 (315)
|..++......++++ .+|.|..|-.... .....+......|..|+......+++ ..||.|+.|
T Consensus 296 v~~ia~G~~ht~alt--~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~~v~~ia~G~~hs~al--t~~G~v~~w 370 (423)
T 3mvd_K 296 IRHIAGGQHHTVILT--TDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSVGCGEVCSYAV--TIDGKLYSW 370 (423)
T ss_dssp EEEEEECSSEEEEEE--TTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCSCEEEEEEETTEEEEE--ETTSCEEEE
T ss_pred eEEEEcccCeEEEEe--CCCcEEEEECCCCCCCCCCCccccccCceEeccCCCCEEEEEcCCCeEEEE--cCCCCEEEE
No 381
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=32.25 E-value=2e+02 Score=23.33 Aligned_cols=193 Identities=8% Similarity=0.008 Sum_probs=102.5
Q ss_pred cEEEEEEcCCCCEEEEEcCCCeEEEEE---ccC------ceEEEE---ecCCCceeEEEEee---cCcEEE-EEeCCeEE
Q psy9936 12 GIYRMNYTKNGRHLLLGGKRGHVAAFD---WVR------KTLACE---MNVMEEVYDIKWLH---LETMFA-VAQKDWVY 75 (315)
Q Consensus 12 ~v~~~~~s~~~~~l~~~~~dg~i~v~~---~~~------~~~~~~---~~~~~~v~~~~~~~---~~~~l~-~~~~~~i~ 75 (315)
.+..+........|+.-+..|.++-.. +.. |..+.. +...+.|..+...+ +..+++ .+.+|.++
T Consensus 43 ~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iK 122 (327)
T 3uc1_A 43 IVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVK 122 (327)
T ss_dssp CEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEE
T ss_pred EEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEE
Confidence 344444444445555556677665443 322 222111 22344565554333 344444 45589998
Q ss_pred EEeCCC------CEEE--EeecCCceEEEEEcCCCceEEEEcCCCeEEEEEcc--C---------CeEEEEeccCCCCeE
Q psy9936 76 IYDNQG------IELH--CLKVLNKVTRMEFLPYHFLLATASEEGYLSWLDTS--I---------GKIVSDFSAKKGKLS 136 (315)
Q Consensus 76 i~~~~~------~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~--~---------~~~~~~~~~~~~~v~ 136 (315)
...+.. .-.. .+.....+..+........++..+..|.+..+... . |.....+. ....|.
T Consensus 123 r~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv 201 (327)
T 3uc1_A 123 KSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFN-IDDRLL 201 (327)
T ss_dssp EEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCC-TTCCEE
T ss_pred EeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCC-CCCEEE
Confidence 887521 1111 12334556655555556677888888998888766 2 11111222 234566
Q ss_pred EEEEcCCCCEEEEEcCCCeEEEEcCCCC-------cceeEee--cccccEEEEEECCCCCEEEEeeCCCcEEEEEccC
Q psy9936 137 VMTQNPYNACICLGHRNGTVTMWSPTVQ-------KPLASLL--CHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRN 205 (315)
Q Consensus 137 ~~~~~p~~~~l~~~~~d~~i~i~d~~~~-------~~~~~~~--~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~ 205 (315)
++...+.+..++..+..|.++.-.+... +-+..+. .-...+-.+....+...++..+.+|.+.-++...
T Consensus 202 ~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 202 SLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp EEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGGG
T ss_pred EEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehhh
Confidence 6666566668888889999888764321 2222222 1123344444333445566667777776676653
No 382
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=29.15 E-value=2.8e+02 Score=25.32 Aligned_cols=79 Identities=9% Similarity=0.090 Sum_probs=0.0
Q ss_pred CeEEEEeccCCCCeEEEEE----cCCCC--EEEEEcCCCeEE-EEcCCCCc-------ceeEee--cccccEEEEEECCC
Q psy9936 122 GKIVSDFSAKKGKLSVMTQ----NPYNA--CICLGHRNGTVT-MWSPTVQK-------PLASLL--CHKAGIQSVAVNHT 185 (315)
Q Consensus 122 ~~~~~~~~~~~~~v~~~~~----~p~~~--~l~~~~~d~~i~-i~d~~~~~-------~~~~~~--~~~~~i~~~~~sp~ 185 (315)
+.++..........+.++. .++|+ .++.|..+|.|. +.-..... .+.++. ....+|..+.++++
T Consensus 401 ~~Pll~~~~~~~~lT~IaVd~v~~~~g~ytVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~ 480 (667)
T 4gz8_A 401 NRPIMIKTDVNYQFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTK 480 (667)
T ss_dssp GSCSEEECSSSCCEEEEEEEEEECSSCEEEEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETT
T ss_pred CCceEEEcCcccceeEEEEEEEecCCCcEEEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCC
Q ss_pred CCEEEEeeCCCcEEE
Q psy9936 186 GTYMATSAGDSQLRI 200 (315)
Q Consensus 186 g~~l~~~~~d~~i~i 200 (315)
..+|++++.++.++|
T Consensus 481 ~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 481 QQQLYIGSTAGVAQL 495 (667)
T ss_dssp TTEEEEEBSSCEEEE
T ss_pred CCEEEEEECCEEEEE
No 383
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=26.11 E-value=2.5e+02 Score=22.44 Aligned_cols=194 Identities=13% Similarity=0.004 Sum_probs=98.7
Q ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEcc---------CceEEE---EecCCCceeEEEEe---ecCc-EEEEEeCCeE
Q psy9936 11 FGIYRMNYTKNGRHLLLGGKRGHVAAFDWV---------RKTLAC---EMNVMEEVYDIKWL---HLET-MFAVAQKDWV 74 (315)
Q Consensus 11 ~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~---------~~~~~~---~~~~~~~v~~~~~~---~~~~-~l~~~~~~~i 74 (315)
+.+..+........|+..+..|.++-+... .|..+. .+...+.|..+... .++. ++.++.+|.+
T Consensus 42 D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~ 121 (307)
T 1zi0_A 42 DFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTV 121 (307)
T ss_dssp CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSSCCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEE
T ss_pred CEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCCCCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeE
Confidence 344344344444556666677766555432 122211 12334456555432 2343 5555668988
Q ss_pred EEEeCC---C---CEEEE--eecCCceEEEEEcCCCceEEEEcCCCeEEEEEccC---------CeEEEEeccCCCCeEE
Q psy9936 75 YIYDNQ---G---IELHC--LKVLNKVTRMEFLPYHFLLATASEEGYLSWLDTSI---------GKIVSDFSAKKGKLSV 137 (315)
Q Consensus 75 ~i~~~~---~---~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~---------~~~~~~~~~~~~~v~~ 137 (315)
+-..+. . .-+.. +.....+..+........++..+.+|.+..+.... |.....+. ....|.+
T Consensus 122 Krt~l~e~~~~~r~G~~~i~l~~~d~lv~~~~~~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~-~~d~Vv~ 200 (307)
T 1zi0_A 122 KKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLG-EGDKVVS 200 (307)
T ss_dssp EEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEE
T ss_pred EEEEHHHhhccccCCeEEEEECCCCEEEEEEEeCCCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeC-CCCEEEE
Confidence 887652 1 11121 22335555555544555677778888888887643 11111222 2344666
Q ss_pred EEEcCCCCEEEEEcCCCeEEEEcCCCC-------cce--eEeecccccEEEEEECCCCCEEEEeeCCCcEEEEEccC
Q psy9936 138 MTQNPYNACICLGHRNGTVTMWSPTVQ-------KPL--ASLLCHKAGIQSVAVNHTGTYMATSAGDSQLRIWDVRN 205 (315)
Q Consensus 138 ~~~~p~~~~l~~~~~d~~i~i~d~~~~-------~~~--~~~~~~~~~i~~~~~sp~g~~l~~~~~d~~i~iwd~~~ 205 (315)
+...+++..+++.+..|.++-.++... +-+ ..+....+.+-.+....+...++..+.+|.+.-+.+..
T Consensus 201 ~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 201 LIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSE 277 (307)
T ss_dssp EECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGG
T ss_pred EEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCCEEeeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEeccc
Confidence 655455567888888998888776321 111 11222224444443333334455666666665555544
No 384
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=25.25 E-value=2.1e+02 Score=24.96 Aligned_cols=56 Identities=9% Similarity=0.198 Sum_probs=35.7
Q ss_pred ceEEEEcCCCeEEEEEcc-CCe-------EEEEecc--CCCCeEEEEEcCCCCEEEEEcCCCeEEE
Q psy9936 103 FLLATASEEGYLSWLDTS-IGK-------IVSDFSA--KKGKLSVMTQNPYNACICLGHRNGTVTM 158 (315)
Q Consensus 103 ~~l~~~~~d~~i~~~d~~-~~~-------~~~~~~~--~~~~v~~~~~~p~~~~l~~~~~d~~i~i 158 (315)
..++.|+.+|.|.-.-+. .+. .+..+.. ...+|..|.++++..+|++++.++.++|
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 356778888876543332 111 1222222 3467899999999999999988876665
No 385
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=24.60 E-value=2e+02 Score=25.06 Aligned_cols=55 Identities=13% Similarity=0.176 Sum_probs=35.1
Q ss_pred EEEEEcCCCeEE-EEcCCCC-------cceeEeec--ccccEEEEEECCCCCEEEEeeCCCcEEE
Q psy9936 146 CICLGHRNGTVT-MWSPTVQ-------KPLASLLC--HKAGIQSVAVNHTGTYMATSAGDSQLRI 200 (315)
Q Consensus 146 ~l~~~~~d~~i~-i~d~~~~-------~~~~~~~~--~~~~i~~~~~sp~g~~l~~~~~d~~i~i 200 (315)
.++.|..+|.|. +.-...+ ..+.++.. ...+|..+.++++..+|++++.++.++|
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 566788888654 3332221 12333332 3578999999999999999988875554
No 386
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*
Probab=24.25 E-value=1.5e+02 Score=19.27 Aligned_cols=10 Identities=10% Similarity=0.322 Sum_probs=4.3
Q ss_pred cCCCeEEEEE
Q psy9936 29 GKRGHVAAFD 38 (315)
Q Consensus 29 ~~dg~i~v~~ 38 (315)
..||.+.+++
T Consensus 26 q~dGnLvly~ 35 (109)
T 3dzw_A 26 QEDCNLVLYD 35 (109)
T ss_dssp CTTSCEEEEE
T ss_pred cCCCcEEEEe
Confidence 3444444443
No 387
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=24.07 E-value=1.4e+02 Score=26.43 Aligned_cols=66 Identities=14% Similarity=0.214 Sum_probs=39.6
Q ss_pred eEEEEEcCCC--CEEEEEcCCCeEEEEcCCCCc----ceeEee--cccccEE-EEEECCCCCEEEEeeCCCcEEE
Q psy9936 135 LSVMTQNPYN--ACICLGHRNGTVTMWSPTVQK----PLASLL--CHKAGIQ-SVAVNHTGTYMATSAGDSQLRI 200 (315)
Q Consensus 135 v~~~~~~p~~--~~l~~~~~d~~i~i~d~~~~~----~~~~~~--~~~~~i~-~~~~sp~g~~l~~~~~d~~i~i 200 (315)
.+.++....+ ..++.|..+|.|.=.-+.... .+..+. ....+|. .+.+++++.+|++++.++.++|
T Consensus 402 lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 402 LTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred eEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 4555544433 356778888876544443221 222232 1245775 8999999999999887764443
No 388
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=22.71 E-value=1.7e+02 Score=19.24 Aligned_cols=26 Identities=4% Similarity=-0.064 Sum_probs=14.9
Q ss_pred EEEEEcCCCCEEEEEcCCCeEEEEcCCC
Q psy9936 136 SVMTQNPYNACICLGHRNGTVTMWSPTV 163 (315)
Q Consensus 136 ~~~~~~p~~~~l~~~~~d~~i~i~d~~~ 163 (315)
..+.+..+|++++... ++.+ +|...+
T Consensus 59 ~~l~l~~dGNLVl~d~-~~~~-iW~S~t 84 (113)
T 3mez_B 59 CFMRLGHSGELDITDD-RLNT-VFVSNT 84 (113)
T ss_dssp CEEEECTTSCEEEECT-TSCE-EEECSC
T ss_pred EEEEEeCCCcEEEECC-CCCE-EEECCC
Confidence 3466777777666543 3333 666543
No 389
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=22.35 E-value=4.7e+02 Score=24.25 Aligned_cols=142 Identities=10% Similarity=0.057 Sum_probs=71.7
Q ss_pred CCcEEEEEEcCCC-CEEEEEcCCCeEEEEEccCce-EEEEecC-------CCceeEEEEeec--CcEEEEEeC------C
Q psy9936 10 QFGIYRMNYTKNG-RHLLLGGKRGHVAAFDWVRKT-LACEMNV-------MEEVYDIKWLHL--ETMFAVAQK------D 72 (315)
Q Consensus 10 ~~~v~~~~~s~~~-~~l~~~~~dg~i~v~~~~~~~-~~~~~~~-------~~~v~~~~~~~~--~~~l~~~~~------~ 72 (315)
...|.+|+++|.. ..+++++..+.|...+ +.++ ....... ...+.++++.|. +.+++.... +
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 5789999999963 4555566666666554 3333 2222221 236899999874 333443332 3
Q ss_pred eEEEEeCCCCEEEEeecC----------CceEEEEEcCC-CceEEEEcCCCeEEEEEccCCeEEEEec------cCCCCe
Q psy9936 73 WVYIYDNQGIELHCLKVL----------NKVTRMEFLPY-HFLLATASEEGYLSWLDTSIGKIVSDFS------AKKGKL 135 (315)
Q Consensus 73 ~i~i~~~~~~~~~~~~~~----------~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~------~~~~~v 135 (315)
.|..-+-.+.....+... ..+..++++|. ...++.+...+.|. ...+.|+.=..+. .....+
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~-~S~DgG~TW~~~~~~~~~~~~~~~~ 171 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIW-KSSDRAKTWTNVTSIPDAFTNGIGY 171 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEE-EESSTTSSCEEETTSCCCCSTTTCE
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEE-EECCCCcccCCCccCccccCCCCCe
Confidence 332222234443333211 13456888885 34566665343332 2222232222221 112457
Q ss_pred EEEEEcCC-CCEEEEEcCC
Q psy9936 136 SVMTQNPY-NACICLGHRN 153 (315)
Q Consensus 136 ~~~~~~p~-~~~l~~~~~d 153 (315)
..+.++|. +..++.+..+
T Consensus 172 ~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 172 TSVIFDPERNGTIYASATA 190 (789)
T ss_dssp EEEEECTTSTTCEEEEESS
T ss_pred EEEEECCCCCCEEEEEEcC
Confidence 88999884 4455555543
No 390
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=21.43 E-value=2.1e+02 Score=25.26 Aligned_cols=66 Identities=9% Similarity=0.014 Sum_probs=39.8
Q ss_pred eEEEEEcCC--CceEEEEcCCCeEEEEEccCC----eEEEEec--cCCCCeE-EEEEcCCCCEEEEEcCCCeEEE
Q psy9936 93 VTRMEFLPY--HFLLATASEEGYLSWLDTSIG----KIVSDFS--AKKGKLS-VMTQNPYNACICLGHRNGTVTM 158 (315)
Q Consensus 93 v~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~----~~~~~~~--~~~~~v~-~~~~~p~~~~l~~~~~d~~i~i 158 (315)
.++++.... ...++.|+.+|.|.-..+..+ .....+. ....+|. .|.+++++..|++++..+.++|
T Consensus 402 lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 402 LTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred eEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 444444432 245777888888765555322 1222222 2245674 8899999999998887765554
Done!