BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9937
(149 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 16/111 (14%)
Query: 36 IFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRG 95
+F AFD +G IH +++V+GLS LRGT E +K+ F +YD+N DG IT+EEM +++
Sbjct: 134 LFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKS 193
Query: 96 TNEELIKFTFLI----------------YDLNNDGFITREEMFQLLRYSRN 130
+ + + T+ I D N DG +T +E + + N
Sbjct: 194 IYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQKDEN 244
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 63.2 bits (152), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 57/113 (50%), Gaps = 16/113 (14%)
Query: 24 FDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGF 83
F + E +F FD+ +G IH +E++ LS RGT EE + + F +YDLN+DG+
Sbjct: 56 FPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGY 115
Query: 84 ITREEMFQLL----------------RGTNEELIKFTFLIYDLNNDGFITREE 120
IT +EM ++ T E +K F + D N DG+IT +E
Sbjct: 116 ITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDE 168
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 60 FLRGTNEELIKFTFLIYDLNNDGFITREEMFQLL----RGTNEELIKFTFLIYDLNNDGF 115
F G+ E+ F ++D +N+GFI EE +L RGT EE + + F +YDLN+DG+
Sbjct: 56 FPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGY 115
Query: 116 ITREEMFQLL 125
IT +EM ++
Sbjct: 116 ITFDEMLTIV 125
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 36 IFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRG 95
+F AFD G + +++V LS LRGT E +++TF +YD+N DG+I +EEM +++
Sbjct: 94 LFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 153
Query: 96 TNEELIKFTFLI----------------YDLNNDGFITREE 120
+ + K+T+ + D N DG +T +E
Sbjct: 154 IYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDE 194
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 60 FLRGTNEELIKFTFLIYDLNNDGFITREEMFQ----LLRGTNEELIKFTFLIYDLNNDGF 115
F G + F +D G + E+ LLRGT E +++TF +YD+N DG+
Sbjct: 82 FPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGY 141
Query: 116 ITREEMFQLLR 126
I +EEM +++
Sbjct: 142 INKEEMMDIVK 152
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 62.4 bits (150), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 36 IFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRG 95
+F AFD G + +++V LS LRGT E +++TF +YD+N DG+I +EEM +++
Sbjct: 61 LFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 120
Query: 96 TNEELIKFTFLI----------------YDLNNDGFITREE 120
+ + K+T+ + D N DG +T +E
Sbjct: 121 IYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDE 161
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 60 FLRGTNEELIKFTFLIYDLNNDGFITREEMFQ----LLRGTNEELIKFTFLIYDLNNDGF 115
F G + F +D G + E+ LLRGT E +++TF +YD+N DG+
Sbjct: 49 FPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGY 108
Query: 116 ITREEMFQLLR 126
I +EEM +++
Sbjct: 109 INKEEMMDIVK 119
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 36 IFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRG 95
+F AFD G + +++V LS LRGT E +++TF +YD+N DG+I +EEM +++
Sbjct: 58 LFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 117
Query: 96 TNEELIKFTFLI----------------YDLNNDGFITREE 120
+ + K+T+ + D N DG +T +E
Sbjct: 118 IYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDE 158
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 33 MERIFCAFDRLC-DGVIHLDEWV-LGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMF 90
++ ++ F C GV++ D + + F G + F +D G + E+
Sbjct: 17 LQVLYRGFKNECPSGVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFV 76
Query: 91 Q----LLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLR 126
LLRGT E +++TF +YD+N DG+I +EEM +++
Sbjct: 77 TALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVK 116
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Query: 36 IFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRG 95
+F AFD +G + ++++ GLS LRGT +E + + F +YD+N DG+IT+EEM +++
Sbjct: 107 LFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKA 166
Query: 96 TNEELIKFTFLI----------------YDLNNDGFITREEMFQLLRYSRN 130
+ + K T+ + D N DG +T +E + + N
Sbjct: 167 IYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKDEN 217
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 12/122 (9%)
Query: 9 DRLGSLVCRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF-LRGTNEE 67
D GSL E + + + + L++R+ FD +G + E++ G+S F ++G E+
Sbjct: 18 DNSGSLSVEEFM--SLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQ 75
Query: 68 LIKFTFLIYDLNNDGFITREEMFQLLR---GTN------EELIKFTFLIYDLNNDGFITR 118
++F F IYD++ DG+I+ E+FQ+L+ G N ++++ T + D + DG I+
Sbjct: 76 KLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISF 135
Query: 119 EE 120
EE
Sbjct: 136 EE 137
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 12/122 (9%)
Query: 9 DRLGSLVCRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF-LRGTNEE 67
D GSL E + + + + L++R+ FD +G + E++ G+S F ++G E+
Sbjct: 19 DNSGSLSVEEFM--SLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQ 76
Query: 68 LIKFTFLIYDLNNDGFITREEMFQLLR---GTN------EELIKFTFLIYDLNNDGFITR 118
++F F IYD++ DG+I+ E+FQ+L+ G N ++++ T + D + DG I+
Sbjct: 77 KLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISF 136
Query: 119 EE 120
EE
Sbjct: 137 EE 138
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 12/122 (9%)
Query: 9 DRLGSLVCRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF-LRGTNEE 67
D GSL E + + + + L++R+ FD +G + E++ G+S F ++G E+
Sbjct: 32 DNSGSLSVEEFM--SLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQ 89
Query: 68 LIKFTFLIYDLNNDGFITREEMFQLLR---GTN------EELIKFTFLIYDLNNDGFITR 118
++F F IYD++ DG+I+ E+FQ+L+ G N ++++ T + D + DG I+
Sbjct: 90 KLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISF 149
Query: 119 EE 120
EE
Sbjct: 150 EE 151
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 12/122 (9%)
Query: 9 DRLGSLVCRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF-LRGTNEE 67
D GSL E + + + + L++R+ FD +G + E++ G+S F ++G E+
Sbjct: 33 DNSGSLSVEEFM--SLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQ 90
Query: 68 LIKFTFLIYDLNNDGFITREEMFQLLR---GTN------EELIKFTFLIYDLNNDGFITR 118
++F F IYD++ DG+I+ E+FQ+L+ G N ++++ T + D + DG I+
Sbjct: 91 KLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISF 150
Query: 119 EE 120
EE
Sbjct: 151 EE 152
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 16/104 (15%)
Query: 36 IFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRG 95
+F AFD G + +++V LS LRGT E +++TF +YD+N DG+I +EEM +++
Sbjct: 58 LFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 117
Query: 96 TNEELIKFTFLI----------------YDLNNDGFITREEMFQ 123
+ + +T+ + D N DG +T +E +
Sbjct: 118 IYDMMGAYTYPVLAEDTPRQHVDVFFQKMDKNKDGIVTLDEFLE 161
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 33 MERIFCAFDRLC-DGVIHLDEWV-LGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMF 90
++ ++ F C GV++ D + + F G + F +D G + E+
Sbjct: 17 LQVLYRGFKNECPSGVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFV 76
Query: 91 Q----LLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLR 126
LLRGT E +++TF +YD+N DG+I +EEM +++
Sbjct: 77 TALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVK 116
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 16/101 (15%)
Query: 36 IFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLL-- 93
+F FD DG I E++ LS RGT +E +++ F +YDL+NDG+ITR EM ++
Sbjct: 68 VFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDA 127
Query: 94 --------------RGTNEELIKFTFLIYDLNNDGFITREE 120
T E+ + F + D N DG +T +E
Sbjct: 128 IYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQE 168
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 60 FLRGTNEELIKFTFLIYDLNNDGFITREEMFQLL----RGTNEELIKFTFLIYDLNNDGF 115
F G + F F ++D N DG I E Q L RGT +E +++ F +YDL+NDG+
Sbjct: 56 FPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGY 115
Query: 116 ITREEMFQLL 125
ITR EM ++
Sbjct: 116 ITRNEMLDIV 125
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 16/131 (12%)
Query: 6 CAFDRLGSLVCRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTN 65
C L +++ N F E +F FD DG I E+++ LS RG
Sbjct: 38 CPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKL 97
Query: 66 EELIKFTFLIYDLNNDGFITREEMFQLLRG----------------TNEELIKFTFLIYD 109
E+ +K+ F +YDL+ +G+I++ EM ++++ T E+ + F D
Sbjct: 98 EQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMD 157
Query: 110 LNNDGFITREE 120
N DG ++ EE
Sbjct: 158 TNRDGKLSLEE 168
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 10 RLGSLVCRELLHNTFDLVTEEILMERIFCAFDRLC-DGVIHLDEW--VLGLSCFLRGTNE 66
+L V ++LL +T D EI + + F R C G + ++E+ + G + F G
Sbjct: 7 KLRPEVMQDLLEST-DFTEHEI--QEWYKGFLRDCPSGHLSMEEFKKIYG-NFFPYGDAS 62
Query: 67 ELIKFTFLIYDLNNDGFITREEMFQLL----RGTNEELIKFTFLIYDLNNDGFITREEMF 122
+ + F +D N DG I E L RG E+ +K+ F +YDL+ +G+I++ EM
Sbjct: 63 KFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEML 122
Query: 123 QLLR 126
++++
Sbjct: 123 EIVQ 126
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 21/141 (14%)
Query: 1 MERIFCAFDRLGSLVCRELLHNT--FDLV------TEEILMERIFCAFDRLCDGVIHLDE 52
+E ++ F ++ S V + L N F L E + +R+F FD +G++ +E
Sbjct: 16 IEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEE 75
Query: 53 WVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLL------RGTN------EE 99
+ LS F ++ I F+F +YDL GFI R+E+ Q++ G N E+
Sbjct: 76 FARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIED 135
Query: 100 LIKFTFLIYDLNNDGFITREE 120
+I TF D +DG I +EE
Sbjct: 136 IIDKTFEEADTKHDGKIDKEE 156
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 21/146 (14%)
Query: 1 MERIFCAFDRLGSLVCRELLHNT--FDLV------TEEILMERIFCAFDRLCDGVIHLDE 52
+E ++ F ++ S V + L N F L E + +R+F FD +G++ +E
Sbjct: 47 IEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEE 106
Query: 53 WVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLL------RGTN------EE 99
+ LS F ++ I F+F +YDL GFI R+E+ Q++ G N E+
Sbjct: 107 FARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIED 166
Query: 100 LIKFTFLIYDLNNDGFITREEMFQLL 125
+I TF D +DG I +EE L+
Sbjct: 167 IIDKTFEEADTKHDGKIDKEEWRSLV 192
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 21/118 (17%)
Query: 33 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQL 92
+E +F AFD D I E+V L+ LRGT E +K+TF IYD + +G I R+E+ +
Sbjct: 61 VEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDI 120
Query: 93 LRG---------------------TNEELIKFTFLIYDLNNDGFITREEMFQLLRYSR 129
+ T EE++ FL+ D N DG ++ E + R +
Sbjct: 121 VESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRDK 178
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 65 NEELIKFT---FLIYDLNNDGFITREEMFQ----LLRGTNEELIKFTFLIYDLNNDGFIT 117
NEE ++ F +D N D I E +LRGT E +K+TF IYD + +G I
Sbjct: 54 NEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCID 113
Query: 118 REEMFQLL 125
R+E+ ++
Sbjct: 114 RQELLDIV 121
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 11/102 (10%)
Query: 33 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQL 92
+E++F FD DG I E+V LS L+G ++ +++ F +YD++ +G I R E+ +
Sbjct: 54 VEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNI 113
Query: 93 LRG-----------TNEELIKFTFLIYDLNNDGFITREEMFQ 123
++ T EE F D+N DG ++ EE +
Sbjct: 114 IKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFME 155
Score = 33.1 bits (74), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 61 LRGTNEELIKFTFLIYDLNNDGFITREEMFQ----LLRGTNEELIKFTFLIYDLNNDGFI 116
L + + ++ F +D N DG+I E +L+G ++ +++ F +YD++ +G I
Sbjct: 46 LSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCI 105
Query: 117 TREEMFQLLRYSR 129
R E+ +++ R
Sbjct: 106 DRGELLNIIKAIR 118
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 31 ILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEM 89
+ +RIF FD +GVI E+V L F E +KF F +YDL GFI REE+
Sbjct: 74 LFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREEL 133
Query: 90 FQLLRG--------TNEELIKF----TFLIYDLNNDGFITREE 120
+++ +E++I+ F+ D NDG I +E
Sbjct: 134 KEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDE 176
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 17/120 (14%)
Query: 18 ELLHNTFDLVTEEILMERIFCAFDRLC-----DGVIHLDEWVLGLSCFLRGTNEE--LIK 70
ELL + EE+ E ++ F +L DG+IH +E+ L L R N
Sbjct: 23 ELLASVTPFTVEEV--EALYELFKKLSSSIIDDGLIHKEEFQLAL---FRNRNRRNLFAD 77
Query: 71 FTFLIYDLNNDGFITREEMFQLL-----RGTNEELIKFTFLIYDLNNDGFITREEMFQLL 125
F ++D+ +G I E + L E +KF F +YDL GFI REE+ +++
Sbjct: 78 RIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMV 137
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 31 ILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEM 89
+ +RIF FD +GVI E+V L F E +KF F +YDL GFI REE+
Sbjct: 74 LFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREEL 133
Query: 90 FQLLRG--------TNEELIKF----TFLIYDLNNDGFITREE 120
+++ +E++I+ F+ D NDG I +E
Sbjct: 134 KEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDE 176
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 17/120 (14%)
Query: 18 ELLHNTFDLVTEEILMERIFCAFDRLC-----DGVIHLDEWVLGLSCFLRGTNEE--LIK 70
ELL + EE+ E ++ F +L DG+IH +E+ L L R N
Sbjct: 23 ELLASVTPFTVEEV--EALYELFKKLSSSIIDDGLIHKEEFQLAL---FRNRNRRNLFAD 77
Query: 71 FTFLIYDLNNDGFITREEMFQLL-----RGTNEELIKFTFLIYDLNNDGFITREEMFQLL 125
F ++D+ +G I E + L E +KF F +YDL GFI REE+ +++
Sbjct: 78 RIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMV 137
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 58/132 (43%), Gaps = 18/132 (13%)
Query: 6 CAFDRLGSLVCRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGT- 64
C L +++ F E +F FD +G I E++ LS RG
Sbjct: 38 CPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGEL 97
Query: 65 NEELIKFTFLIYDLNNDGFITREEMFQLLRG----------------TNEELIKFTFLIY 108
N++LI + F +YDL+N+G I+ +EM +++ T E+ + F +
Sbjct: 98 NDKLI-WAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMM 156
Query: 109 DLNNDGFITREE 120
D N DG +T EE
Sbjct: 157 DKNKDGQLTLEE 168
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 60 FLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRGT-----NEELIKFTFLIYDLNNDG 114
F G ++ F ++D + +G+I +E L T N++LI + F +YDL+N+G
Sbjct: 56 FPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLI-WAFQLYDLDNNG 114
Query: 115 FITREEMFQLL 125
I+ +EM +++
Sbjct: 115 LISYDEMLRIV 125
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 33 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMF-- 90
+++++ FD DG + E++ ++ ++ E+ +K+ F +YD + +G I + E+
Sbjct: 59 IDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDM 118
Query: 91 ----QLLRG----TNEELIKFTFLIYDLNNDGFITREE 120
Q L G + EE I F D+NNDG +T EE
Sbjct: 119 FMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEE 156
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 16/84 (19%)
Query: 63 GTNEELIKFTFLIYDLNNDGFITREEMFQLLRGTNEELIKFTFLI--------------- 107
GT E +K+ F +YD+N DG+IT+EEM +++ + + + T+ I
Sbjct: 5 GTVHEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFE 64
Query: 108 -YDLNNDGFITREEMFQLLRYSRN 130
D N DG +T EE + + N
Sbjct: 65 KMDRNQDGVVTIEEFLEACQKDEN 88
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 15/130 (11%)
Query: 7 AFDRLGSLVCRELLHNTFDLVTEEILME--RIFCAFDRLCDGVIHLDEWVLGLSCFLRGT 64
F G+++ +L +NT D +TEE + E F FD+ DG I E LG G
Sbjct: 251 GFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKE--LGTVMRSLGQ 308
Query: 65 NEELIKFTFLIYDLNNDG--------FITREEMFQLLRGTN-EELIKFTFLIYDLNNDGF 115
N + +I +++ DG F+T M + ++ T+ EE I+ F ++D + +G+
Sbjct: 309 NPTEAELQDMINEVDADGNGTIDFPEFLTM--MARKMKDTDSEEEIREAFRVFDKDGNGY 366
Query: 116 ITREEMFQLL 125
I+ E+ ++
Sbjct: 367 ISAAELRHVM 376
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 63/133 (47%), Gaps = 9/133 (6%)
Query: 2 ERIFCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGL 57
+ F FD+ G ++ +EL + + E ++ + D +G I E++ +
Sbjct: 280 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 339
Query: 58 SCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNN 112
+ ++ T+ EE I+ F ++D + +G+I+ E+ ++ E+L + D++
Sbjct: 340 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 399
Query: 113 DGFITREEMFQLL 125
DG + EE Q++
Sbjct: 400 DGQVNYEEFVQMM 412
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/90 (20%), Positives = 42/90 (46%)
Query: 6 CAFDRLGSLVCRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTN 65
C R+ + + F + + +F +FD DG + E+V+ L G
Sbjct: 46 CPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHXTTAGKT 105
Query: 66 EELIKFTFLIYDLNNDGFITREEMFQLLRG 95
+ +++ F +YD++ +G I++ E+ +++
Sbjct: 106 NQKLEWAFSLYDVDGNGTISKNEVLEIVXA 135
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Query: 33 MERIFCAFDRLCDGVIHLDEW----VLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREE 88
++ I D G I +E+ V + +G +EE ++ F I+D N DGFI EE
Sbjct: 58 LDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEE 117
Query: 89 MFQLLRGTN----EELIKFTFLIYDLNNDGFITREEMFQLLR 126
+ ++LR T EE I+ D NNDG I +E +++
Sbjct: 118 LGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 12/113 (10%)
Query: 27 VTEEILMERIFCAFDRL-CDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFIT 85
++EE++ E AFD DG + LG + G N + +I +++ DG T
Sbjct: 14 LSEEMIAE-FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 86 RE----------EMFQLLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRYS 128
+ +M + +G +EE ++ F I+D N DGFI EE+ ++LR +
Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRAT 125
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 15/129 (11%)
Query: 8 FDRLGSLVCRELLHNTFDLVTEEILME--RIFCAFDRLCDGVIHLDEWVLGLSCFLRGTN 65
F G+++ +L +NT D +TEE + E F FD+ DG I E LG G N
Sbjct: 249 FKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKE--LGTVMRSLGQN 306
Query: 66 EELIKFTFLIYDLNNDG--------FITREEMFQLLRGTN-EELIKFTFLIYDLNNDGFI 116
+ +I +++ DG F+T M + ++ T+ EE I+ F ++D + +G+I
Sbjct: 307 PTEAELQDMINEVDADGNGTIDFPEFLTM--MARKMKDTDSEEEIREAFRVFDKDGNGYI 364
Query: 117 TREEMFQLL 125
+ E+ ++
Sbjct: 365 SAAELRHVM 373
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 63/133 (47%), Gaps = 9/133 (6%)
Query: 2 ERIFCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGL 57
+ F FD+ G ++ +EL + + E ++ + D +G I E++ +
Sbjct: 277 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 336
Query: 58 SCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNN 112
+ ++ T+ EE I+ F ++D + +G+I+ E+ ++ E+L + D++
Sbjct: 337 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 396
Query: 113 DGFITREEMFQLL 125
DG + EE Q++
Sbjct: 397 DGQVNYEEFVQMM 409
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/88 (20%), Positives = 42/88 (47%)
Query: 6 CAFDRLGSLVCRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTN 65
C R+ + + F + + +F +FD DG + E+V+ L G
Sbjct: 38 CPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKT 97
Query: 66 EELIKFTFLIYDLNNDGFITREEMFQLL 93
+ +++ F +YD++ +G I++ E+ +++
Sbjct: 98 NQKLEWAFSLYDVDGNGTISKNEVLEIV 125
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/88 (20%), Positives = 42/88 (47%)
Query: 6 CAFDRLGSLVCRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTN 65
C R+ + + F + + +F +FD DG + E+V+ L G
Sbjct: 38 CPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKT 97
Query: 66 EELIKFTFLIYDLNNDGFITREEMFQLL 93
+ +++ F +YD++ +G I++ E+ +++
Sbjct: 98 NQKLEWAFSLYDVDGNGTISKNEVLEIV 125
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/88 (20%), Positives = 42/88 (47%)
Query: 6 CAFDRLGSLVCRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTN 65
C R+ + + F + + +F +FD DG + E+V+ L G
Sbjct: 39 CPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKT 98
Query: 66 EELIKFTFLIYDLNNDGFITREEMFQLL 93
+ +++ F +YD++ +G I++ E+ +++
Sbjct: 99 NQKLEWAFSLYDVDGNGTISKNEVLEIV 126
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/88 (20%), Positives = 42/88 (47%)
Query: 6 CAFDRLGSLVCRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTN 65
C R+ + + F + + +F +FD DG + E+V+ L G
Sbjct: 38 CPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKT 97
Query: 66 EELIKFTFLIYDLNNDGFITREEMFQLL 93
+ +++ F +YD++ +G I++ E+ +++
Sbjct: 98 NQKLEWAFSLYDVDGNGTISKNEVLEIV 125
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 33 MERIFCAFDRLCDGVIHLDEW----VLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREE 88
++ I D G I +E+ V + +G +EE + F I+D N DGFI EE
Sbjct: 58 LDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEE 117
Query: 89 MFQLLRGTNEELIKFT----FLIYDLNNDGFITREEMFQLLR 126
+ ++LR T E +I+ D NNDG I +E +++
Sbjct: 118 LGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 12/113 (10%)
Query: 27 VTEEILMERIFCAFDRL-CDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFIT 85
++EE++ E AFD DG + LG + G N + +I +++ DG T
Sbjct: 14 LSEEMIAE-FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 86 RE----------EMFQLLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRYS 128
+ +M + +G +EE + F I+D N DGFI EE+ ++LR +
Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRAT 125
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 33 MERIFCAFDRLCDGVIHLDEW----VLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREE 88
++ I D G I +E+ V + +G +EE + F I+D N DGFI EE
Sbjct: 58 LDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEE 117
Query: 89 MFQLLRGTN----EELIKFTFLIYDLNNDGFITREEMFQLLR 126
+ ++LR T EE I+ D NNDG I +E +++
Sbjct: 118 LGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 12/113 (10%)
Query: 27 VTEEILMERIFCAFDRL-CDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFIT 85
++EE++ E AFD DG + LG + G N + +I +++ DG T
Sbjct: 14 LSEEMIAE-FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 86 RE----------EMFQLLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRYS 128
+ +M + +G +EE + F I+D N DGFI EE+ ++LR +
Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRAT 125
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 33 MERIFCAFDRLCDGVIHLDEW----VLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREE 88
++ I D G I +E+ V + +G +EE + F I+D N DGFI EE
Sbjct: 58 LDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEE 117
Query: 89 MFQLLRGTN----EELIKFTFLIYDLNNDGFITREEMFQLLR 126
+ ++LR T EE I+ D NNDG I +E +++
Sbjct: 118 LGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 12/113 (10%)
Query: 27 VTEEILMERIFCAFDRL-CDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFIT 85
++EE++ E AFD DG + LG + G N + +I +++ DG T
Sbjct: 14 LSEEMIAE-FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 86 RE----------EMFQLLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRYS 128
+ +M + +G +EE + F I+D N DGFI EE+ ++LR +
Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRAT 125
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 62 RGTNEELIKFTFLIYDLNNDGFITREEMFQLLRGTNEELIKFT----FLIYDLNNDGFIT 117
+G +EE + F I+D N DGFI EE+ ++LR T E +I+ D NNDG I
Sbjct: 5 KGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRID 64
Query: 118 REEMFQLLR 126
+E +++
Sbjct: 65 FDEFLKMME 73
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 33 MERIFCAFDRLCDGVIHLDEW----VLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREE 88
++ I D G I +E+ V + +G +EE + F I+D N DGFI EE
Sbjct: 55 LDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEE 114
Query: 89 MFQLLRGTN----EELIKFTFLIYDLNNDGFITREEMFQLLR 126
+ ++LR T EE I+ D NNDG I +E +++
Sbjct: 115 LGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMME 156
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 12/113 (10%)
Query: 27 VTEEILMERIFCAFDRL-CDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFIT 85
++EE++ E AFD DG + LG + G N + +I +++ DG T
Sbjct: 11 LSEEMIAE-FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGT 69
Query: 86 RE----------EMFQLLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRYS 128
+ +M + +G +EE + F I+D N DGFI EE+ ++LR +
Sbjct: 70 IDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRAT 122
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/88 (19%), Positives = 42/88 (47%)
Query: 6 CAFDRLGSLVCRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTN 65
C R+ + + F + + +F +FD DG + ++V+ L G
Sbjct: 38 CPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKT 97
Query: 66 EELIKFTFLIYDLNNDGFITREEMFQLL 93
+ +++ F +YD++ +G I++ E+ +++
Sbjct: 98 NQKLEWAFSLYDVDGNGTISKNEVLEIV 125
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/88 (19%), Positives = 42/88 (47%)
Query: 6 CAFDRLGSLVCRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTN 65
C R+ + + F + + +F +FD DG + ++V+ L G
Sbjct: 38 CPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKT 97
Query: 66 EELIKFTFLIYDLNNDGFITREEMFQLL 93
+ +++ F +YD++ +G I++ E+ +++
Sbjct: 98 NQKLEWAFSLYDVDGNGTISKNEVLEIV 125
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 39.3 bits (90), Expect = 7e-04, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 15/129 (11%)
Query: 8 FDRLGSLVCRELLHNTFDLVTEEILME--RIFCAFDRLCDGVIHLDEWVLGLSCFLRGTN 65
F G+++ +L +NT D +TEE + E F FD+ DG I E LG G N
Sbjct: 286 FKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKE--LGTVMRSLGQN 343
Query: 66 EELIKFTFLIYDLNNDG--------FITREEMFQLLRGTN-EELIKFTFLIYDLNNDGFI 116
+ +I +++ DG F+T M + ++ T+ EE I+ F ++D + +G+I
Sbjct: 344 PTEAELQDMINEVDADGNGTIDFPEFLTM--MARWMKDTDSEEEIREAFRVFDKDGNGYI 401
Query: 117 TREEMFQLL 125
+ E+ ++
Sbjct: 402 SAAELRHVM 410
Score = 34.3 bits (77), Expect = 0.023, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 45 DGVIHLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL--- 100
+G I E++ ++ +++ T+ EE I+ F ++D + +G+I+ E+ ++ E+L
Sbjct: 361 NGTIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 420
Query: 101 -IKFTFLIYDLNNDGFITREEMFQLL 125
+ D++ DG + EE Q++
Sbjct: 421 EVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 21/124 (16%)
Query: 11 LGSLVCRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEW----VLGLSCFLRGTNE 66
LG +E L D + EE+ D G I +E+ V + +G +E
Sbjct: 46 LGQTPTKEEL----DAIIEEV---------DEDGSGTIDFEEFLVMMVRQMKEDAKGKSE 92
Query: 67 ELIKFTFLIYDLNNDGFITREEMFQLLRGTNE----ELIKFTFLIYDLNNDGFITREEMF 122
E + F I+D N DG+I EE+ ++ R + E E I+ D NNDG I +E
Sbjct: 93 EELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFL 152
Query: 123 QLLR 126
+++
Sbjct: 153 KMME 156
Score = 34.3 bits (77), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 27 VTEEILME--RIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFI 84
++EE++ E F FD G I + E LG + G + +I +++ DG
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKE--LGTVMRMLGQTPTKEELDAIIEEVDEDGSG 68
Query: 85 TRE----------EMFQLLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRYS 128
T + +M + +G +EE + F I+D N DG+I EE+ ++ R S
Sbjct: 69 TIDFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRAS 122
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 21/124 (16%)
Query: 11 LGSLVCRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEW----VLGLSCFLRGTNE 66
LG +E L D + EE+ D G I +E+ V + +G +E
Sbjct: 46 LGQTPTKEEL----DAIIEEV---------DEDGSGTIDFEEFLVMMVRQMKEDAKGKSE 92
Query: 67 ELIKFTFLIYDLNNDGFITREEMFQLLRGTNE----ELIKFTFLIYDLNNDGFITREEMF 122
E + F I+D N DG+I EE+ ++ R + E E I+ D NNDG I +E
Sbjct: 93 EELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFL 152
Query: 123 QLLR 126
+++
Sbjct: 153 KMME 156
Score = 34.3 bits (77), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 27 VTEEILME--RIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFI 84
++EE++ E F FD G I + E LG + G + +I +++ DG
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKE--LGTVMRMLGQTPTKEELDAIIEEVDEDGSG 68
Query: 85 TRE----------EMFQLLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRYS 128
T + +M + +G +EE + F I+D N DG+I EE+ ++ R S
Sbjct: 69 TIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRAS 122
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 39.3 bits (90), Expect = 0.001, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 15/129 (11%)
Query: 8 FDRLGSLVCRELLHNTFDLVTEEILME--RIFCAFDRLCDGVIHLDEWVLGLSCFLRGTN 65
F G+++ +L +NT D +TEE + E F FD+ DG I E LG G N
Sbjct: 285 FKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKE--LGTVMRSLGQN 342
Query: 66 EELIKFTFLIYDLNNDG--------FITREEMFQLLRGTN-EELIKFTFLIYDLNNDGFI 116
+ +I +++ DG F+T M + ++ T+ EE I+ F ++D + +G+I
Sbjct: 343 PTEAELQDMINEVDADGDGTIDFPEFLTM--MARKMKDTDSEEEIREAFRVFDKDGNGYI 400
Query: 117 TREEMFQLL 125
+ E+ ++
Sbjct: 401 SAAELRHVM 409
Score = 34.7 bits (78), Expect = 0.020, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 45 DGVIHLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL--- 100
DG I E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ E+L
Sbjct: 360 DGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 419
Query: 101 -IKFTFLIYDLNNDGFITREEMFQLL 125
+ D++ DG + EE Q++
Sbjct: 420 EVDEMIREADIDGDGQVNYEEFVQMM 445
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 39.3 bits (90), Expect = 0.001, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 15/129 (11%)
Query: 8 FDRLGSLVCRELLHNTFDLVTEEILME--RIFCAFDRLCDGVIHLDEWVLGLSCFLRGTN 65
F G+++ +L +NT D +TEE + E F FD+ DG I E LG G N
Sbjct: 287 FKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKE--LGTVMRSLGQN 344
Query: 66 EELIKFTFLIYDLNNDG--------FITREEMFQLLRGTN-EELIKFTFLIYDLNNDGFI 116
+ +I +++ DG F+T M + ++ T+ EE I+ F ++D + +G+I
Sbjct: 345 PTEAELQDMINEVDADGNGTIDFPEFLTM--MARKMKDTDSEEEIREAFRVFDKDGNGYI 402
Query: 117 TREEMFQLL 125
+ E+ ++
Sbjct: 403 SAAELRHVM 411
Score = 32.7 bits (73), Expect = 0.076, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 45 DGVIHLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL--- 100
+G I E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ E+L
Sbjct: 362 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 421
Query: 101 -IKFTFLIYDLNNDGFITREEMFQLL 125
+ D++ DG + EE Q++
Sbjct: 422 EVDEMIREADIDGDGQVNYEEFVQMM 447
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 38.9 bits (89), Expect = 0.001, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 15/129 (11%)
Query: 8 FDRLGSLVCRELLHNTFDLVTEEILME--RIFCAFDRLCDGVIHLDEWVLGLSCFLRGTN 65
F G+++ +L +NT D +TEE + E F FD+ DG I E LG G N
Sbjct: 286 FKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKE--LGTVMRSLGQN 343
Query: 66 EELIKFTFLIYDLNNDG--------FITREEMFQLLRGTN-EELIKFTFLIYDLNNDGFI 116
+ +I +++ DG F+T M + ++ T+ EE I+ F ++D + +G+I
Sbjct: 344 PTEAELQDMINEVDADGNGTIDFPEFLTM--MARKMKDTDSEEEIREAFRVFDKDGNGYI 401
Query: 117 TREEMFQLL 125
+ E+ ++
Sbjct: 402 SAAELRHVM 410
Score = 32.7 bits (73), Expect = 0.077, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 45 DGVIHLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL--- 100
+G I E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ E+L
Sbjct: 361 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 420
Query: 101 -IKFTFLIYDLNNDGFITREEMFQLL 125
+ D++ DG + EE Q++
Sbjct: 421 EVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 38.9 bits (89), Expect = 0.001, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 15/129 (11%)
Query: 8 FDRLGSLVCRELLHNTFDLVTEEILME--RIFCAFDRLCDGVIHLDEWVLGLSCFLRGTN 65
F G+++ +L +NT D +TEE + E F FD+ DG I E LG G N
Sbjct: 286 FKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKE--LGTVMRSLGQN 343
Query: 66 EELIKFTFLIYDLNNDG--------FITREEMFQLLRGTN-EELIKFTFLIYDLNNDGFI 116
+ +I +++ DG F+T M + ++ T+ EE I+ F ++D + +G+I
Sbjct: 344 PTEAELQDMINEVDADGNGTIDFPEFLTM--MARKMKDTDSEEEIREAFRVFDKDGNGYI 401
Query: 117 TREEMFQLL 125
+ E+ ++
Sbjct: 402 SAAELRHVM 410
Score = 32.7 bits (73), Expect = 0.079, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 45 DGVIHLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL--- 100
+G I E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ E+L
Sbjct: 361 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 420
Query: 101 -IKFTFLIYDLNNDGFITREEMFQLL 125
+ D++ DG + EE Q++
Sbjct: 421 EVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 38.5 bits (88), Expect = 0.001, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 8 FDRLGSLVCRELLHNTFDLVTEEILME--RIFCAFDRLCDGVIHLDEWVLGLSCFLRGTN 65
F G+++ +L +NT D +TEE + E F FD+ DG I E LG G N
Sbjct: 286 FKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKE--LGTVMRSLGQN 343
Query: 66 EELIKFTFLI--YDLNNDGFITREEMFQLLR-----GTNEELIKFTFLIYDLNNDGFITR 118
+ +I D + DG I E ++ +EE I+ F ++D + +G+I+
Sbjct: 344 PTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISA 403
Query: 119 EEMFQLL 125
E+ ++
Sbjct: 404 AELRHVM 410
Score = 33.9 bits (76), Expect = 0.034, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 45 DGVIHLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL--- 100
DG I E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ E+L
Sbjct: 361 DGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 420
Query: 101 -IKFTFLIYDLNNDGFITREEMFQLL 125
+ D++ DG + EE Q++
Sbjct: 421 EVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 38.5 bits (88), Expect = 0.002, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 15/129 (11%)
Query: 8 FDRLGSLVCRELLHNTFDLVTEEILME--RIFCAFDRLCDGVIHLDEWVLGLSCFLRGTN 65
F G+++ +L +NT D +TEE + E F FD+ DG I E LG G N
Sbjct: 286 FKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKE--LGTVMRSLGQN 343
Query: 66 EELIKFTFLIYDLNNDG--------FITREEMFQLLRGTN-EELIKFTFLIYDLNNDGFI 116
+ +I +++ DG F+T M + ++ T+ EE I+ F ++D + +G+I
Sbjct: 344 PTEAELQDMINEVDADGNGTIDFPEFLTM--MARKMKYTDSEEEIREAFRVFDKDGNGYI 401
Query: 117 TREEMFQLL 125
+ E+ ++
Sbjct: 402 SAAELRHVM 410
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 19/139 (13%)
Query: 5 FCAFDRLG---------SLVCRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVL 55
F FD+ G + V R L N TEE L + I D +G I DE++
Sbjct: 16 FGLFDKDGDGCITVEELATVIRSLDQNP----TEEELQDMI-SEVDADGNGTIEFDEFLS 70
Query: 56 GLSCFLRGTN-EELIKFTFLIYDLNNDGFITREE----MFQLLRGTNEELIKFTFLIYDL 110
++ ++ T+ EE +K F ++D + +G+I+ E M L +E ++ DL
Sbjct: 71 LMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADL 130
Query: 111 NNDGFITREEMFQLLRYSR 129
+ DG + EE +++ R
Sbjct: 131 DGDGQVNYEEFVKMMMTVR 149
Score = 34.7 bits (78), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 56/108 (51%), Gaps = 7/108 (6%)
Query: 25 DLVTEEILME--RIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDG 82
D+++EE +++ F FD+ DG I ++E + + EE ++ D + +G
Sbjct: 2 DILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNG 61
Query: 83 FITREE----MFQLLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLL 125
I +E M + ++ T+ EE +K F ++D + +G+I+ E+ ++
Sbjct: 62 TIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVM 109
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 64/133 (48%), Gaps = 9/133 (6%)
Query: 2 ERIFCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGL 57
+ F FD+ G ++ +EL + + E ++ + D DG I E+++ +
Sbjct: 305 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMM 364
Query: 58 SCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNN 112
+ ++ T+ EE I+ F ++D + +G+I+ E+ ++ E+L + D++
Sbjct: 365 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 424
Query: 113 DGFITREEMFQLL 125
DG + EE Q++
Sbjct: 425 DGQVNYEEFVQMM 437
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 297 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 351
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 33 MERIFCAFDRLCDGVIHLDEW-VLGLSCFL---RGTNEELIKFTFLIYDLNNDGFITREE 88
++ + D G + DE+ V+ + C +G EE + F ++D N DG+I EE
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEE 116
Query: 89 MFQLLRGTNEEL----IKFTFLIYDLNNDGFITREEMFQLLR 126
+ +L+ T E + I+ D NNDG I +E + ++
Sbjct: 117 LKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 28 TEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITRE 87
TEE L + +F FD+ DG I L+E + L E+ I+ D NNDG I +
Sbjct: 93 TEEELSD-LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 88 EMFQLLRG 95
E + ++G
Sbjct: 152 EFLEFMKG 159
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 28 TEEILMERIFCAFDRLCDGVIHLDEW----VLGLSCFLRGTNEELIKFTFLIYDLNNDGF 83
T E L E I D G + DE+ V + +G +EE + F ++D N DG+
Sbjct: 53 TPEELQEMI-DEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGY 111
Query: 84 ITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGFITREEMFQLLR 126
I EE+ +L+ T E + I+ D NNDG I +E + ++
Sbjct: 112 IDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
Score = 32.3 bits (72), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 8 FDRLGSLVCRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEE 67
FD ++ R + ++ EE+ +F FD+ DG I L+E + L E+
Sbjct: 74 FDEFLVMMVRSMKDDSKGKSEEEL--SDLFRMFDKNADGYIDLEELKIMLQATGETITED 131
Query: 68 LIKFTFLIYDLNNDGFITREEMFQLLRG 95
I+ D NNDG I +E + ++G
Sbjct: 132 DIEELMKDGDKNNDGRIDYDEFLEFMKG 159
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 28 TEEILMERIFCAFDRLCDGVIHLDEW----VLGLSCFLRGTNEELIKFTFLIYDLNNDGF 83
T E L E I D G + DE+ V + +G EE + F ++D N DG+
Sbjct: 53 TPEELQEMI-DEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGY 111
Query: 84 ITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGFITREEMFQLLR 126
I EE+ +L+ T E + I+ D NNDG I +E + ++
Sbjct: 112 IDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
Score = 33.1 bits (74), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 8 FDRLGSLVCRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEE 67
FD ++ R + ++ EE+ +F FD+ DG I L+E + L E+
Sbjct: 74 FDEFLVMMVRSMKDDSKGKTEEEL--SDLFRMFDKNADGYIDLEELKIMLQATGETITED 131
Query: 68 LIKFTFLIYDLNNDGFITREEMFQLLRG 95
I+ D NNDG I +E + ++G
Sbjct: 132 DIEELMKDGDKNNDGRIDYDEFLEFMKG 159
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 9/131 (6%)
Query: 4 IFCAFDRLGS--LVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSC 59
F FD+ G + REL + + E + + DR +G + E++ ++
Sbjct: 15 AFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMAR 74
Query: 60 FLRGT-NEELIKFTFLIYDLNNDGFITREE----MFQLLRGTNEELIKFTFLIYDLNNDG 114
++ T NEE I+ F ++D + +GF++ E M +L ++E + D + DG
Sbjct: 75 KMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDG 134
Query: 115 FITREEMFQLL 125
+ EE ++L
Sbjct: 135 QVNYEEFVRVL 145
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 27 VTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRG--TNEEL-IKFTFLIYDLNNDGF 83
+ E L++ IF A D +G I L E+ + ++E++ +K + + D + DG
Sbjct: 32 IKNEQLLQLIFKAIDIDGNGEIDLAEFTKFAAAVKEQDLSDEKVGLKILYKLMDADGDGK 91
Query: 84 ITREEMFQLLRGTNEELIKFTFLIYDLNNDGFITREE 120
+T+EE+ + E + + D N DG+IT EE
Sbjct: 92 LTKEEVTTFFKKFGYEKVVDQIMKADANGDGYITLEE 128
Score = 33.1 bits (74), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
Query: 32 LMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQ 91
+ E +F D DG + +E +S NE+L++ F D++ +G I E +
Sbjct: 1 MAEALFKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTK 60
Query: 92 LLRGTNEE-------LIKFTFLIYDLNNDGFITREEM 121
E+ +K + + D + DG +T+EE+
Sbjct: 61 FAAAVKEQDLSDEKVGLKILYKLMDADGDGKLTKEEV 97
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 28 TEEILMERIFCAFDRLCDGVIHLDEW----VLGLSCFLRGTNEELIKFTFLIYDLNNDGF 83
T E L E I D G + DE+ V + +G +EE + F ++D N DG+
Sbjct: 53 TPEELQEMI-DEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGY 111
Query: 84 ITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGFITREEMFQLLR 126
I +E+ +L+ T E + I+ D NNDG I +E + ++
Sbjct: 112 IDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEXLEFMK 158
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 8 FDRLGSLVCRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEE 67
FD ++ R + ++ EE+ +F FD+ DG I LDE + L E+
Sbjct: 74 FDEFLVMMVRSMKDDSKGKSEEEL--SDLFRMFDKNADGYIDLDELKIMLQATGETITED 131
Query: 68 LIKFTFLIYDLNNDGFITREEMFQLLRG 95
I+ D NNDG I +E + ++G
Sbjct: 132 DIEELMKDGDKNNDGRIDYDEXLEFMKG 159
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 13/120 (10%)
Query: 15 VCRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEW----VLGLSCFLRGTNEELIK 70
V R L N T E L E I D G + DE+ V + +G +EE +
Sbjct: 44 VMRMLGQNP----TPEELQEMI-DEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELS 98
Query: 71 FTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGFITREEMFQLLR 126
F ++D N DG+I +E+ +L+ T E + I+ D NNDG I +E + ++
Sbjct: 99 DLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
Score = 32.7 bits (73), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 8 FDRLGSLVCRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEE 67
FD ++ R + ++ EE+ +F +D+ DG I LDE + L E+
Sbjct: 74 FDEFLVMMVRSMKDDSKGKSEEEL--SDLFRMWDKNADGYIDLDELKIMLQATGETITED 131
Query: 68 LIKFTFLIYDLNNDGFITREEMFQLLRG 95
I+ D NNDG I +E + ++G
Sbjct: 132 DIEELMKDGDKNNDGRIDYDEFLEFMKG 159
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 5 FCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF 60
F FD+ G ++ +EL + + E ++ + D DG I E++ ++
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARK 75
Query: 61 LRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGF 115
++ T+ EE I+ F ++D + +G+I+ E+ ++ E+L + D++ DG
Sbjct: 76 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 135
Query: 116 ITREEMFQLL 125
+ EE Q++
Sbjct: 136 VNYEEFVQMM 145
Score = 26.6 bits (57), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 59
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 27 VTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRG---TNEEL-IKFTFLIYDLNNDG 82
+ E L++ IF + D +G I +E+ ++G +++++ +K + + D++ DG
Sbjct: 32 IKNEQLLQLIFKSIDADGNGEIDQNEFAK-FYGSIQGQDLSDDKIGLKVLYKLMDVDGDG 90
Query: 83 FITREEMFQLLRGTNEELIKFTFLIYDLNNDGFITREEMFQ 123
+T+EE+ + E + + D N DG+IT EE +
Sbjct: 91 KLTKEEVTSFFKKHGIEKVAEQVMKADANGDGYITLEEFLE 131
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 13/120 (10%)
Query: 15 VCRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEW----VLGLSCFLRGTNEELIK 70
V R L N T E L E I D G + DE+ V + +G +EE +
Sbjct: 44 VMRMLGQNP----TPEELQEMI-DEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELS 98
Query: 71 FTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGFITREEMFQLLR 126
F ++D N DG+I +E+ +L+ T E + I+ D NNDG I +E + ++
Sbjct: 99 DLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEWLEFMK 158
Score = 34.3 bits (77), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 8 FDRLGSLVCRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEE 67
FD ++ R + ++ EE+ +F FD+ DG I LDE + L E+
Sbjct: 74 FDEFLVMMVRSMKDDSKGKSEEEL--SDLFRMFDKNADGYIDLDELKIMLQATGETITED 131
Query: 68 LIKFTFLIYDLNNDGFITREEMFQLLRG 95
I+ D NNDG I +E + ++G
Sbjct: 132 DIEELMKDGDKNNDGRIDYDEWLEFMKG 159
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 27 VTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRG---TNEEL-IKFTFLIYDLNNDG 82
+ E L++ IF + D +G I +E+ ++G +++++ +K + + D++ DG
Sbjct: 32 IKNEQLLQLIFKSIDADGNGEIDQNEFAK-FYGSIQGQDLSDDKIGLKVLYKLMDVDGDG 90
Query: 83 FITREEMFQLLRGTNEELIKFTFLIYDLNNDGFITREEMFQ 123
+T+EE+ + E + + D N DG+IT EE +
Sbjct: 91 KLTKEEVTSFFKKHGIEKVAEQVMKADANGDGYITLEEFLE 131
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 61 LRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGFI 116
++G +EE + F ++D N DG+I EE+ +L+ T E + I+ D NNDG I
Sbjct: 1 MKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRI 60
Query: 117 TREEMFQLLR 126
+E + ++
Sbjct: 61 DYDEFLEFMK 70
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%)
Query: 36 IFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRG 95
+F FD+ DG I L+E + L E+ I+ D NNDG I +E + ++G
Sbjct: 12 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 71
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 63/133 (47%), Gaps = 9/133 (6%)
Query: 2 ERIFCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGL 57
+ F FD+ G ++ +EL + + E ++ + D +G I E++ +
Sbjct: 280 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 339
Query: 58 SCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNN 112
+ ++ T+ EE I+ F ++D + +G+I+ E+ ++ E+L + D++
Sbjct: 340 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 399
Query: 113 DGFITREEMFQLL 125
DG + EE Q++
Sbjct: 400 DGQVNYEEFVQMM 412
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 272 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 326
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 34.3 bits (77), Expect = 0.029, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 45 DGVIHLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL--- 100
DG I E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ E+L
Sbjct: 360 DGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 419
Query: 101 -IKFTFLIYDLNNDGFITREEMFQLL 125
+ D++ DG + EE Q++
Sbjct: 420 EVDEMIREADIDGDGQVNYEEFVQMM 445
Score = 27.3 bits (59), Expect = 3.7, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 305 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 359
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 34.3 bits (77), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 69 IKFTFLIYDLNNDGFITREEMFQLLR 94
+ + F +YDL+ DG I+R EM Q+LR
Sbjct: 116 LHYAFQLYDLDRDGKISRHEMLQVLR 141
Score = 34.3 bits (77), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 101 IKFTFLIYDLNNDGFITREEMFQLLR 126
+ + F +YDL+ DG I+R EM Q+LR
Sbjct: 116 LHYAFQLYDLDRDGKISRHEMLQVLR 141
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 34.3 bits (77), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Query: 5 FCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF 60
F FD+ G ++ +EL + + E ++ + D +G I E++ ++
Sbjct: 12 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 71
Query: 61 LRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRGTNEELI--KFTFLIYDLN--NDGFI 116
++ T+ E I+ F ++D + +G+I+ E+ ++ E+L + +I + N DG +
Sbjct: 72 MKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQV 131
Query: 117 TREEMFQLL 125
EE Q++
Sbjct: 132 NYEEFVQMM 140
Score = 26.6 bits (57), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 55
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 33.9 bits (76), Expect = 0.033, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 45 DGVIHLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL--- 100
DG I E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ E+L
Sbjct: 360 DGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 419
Query: 101 -IKFTFLIYDLNNDGFITREEMFQLL 125
+ D++ DG + EE Q++
Sbjct: 420 EVDEMIREADIDGDGQVNYEEFVQMM 445
Score = 26.9 bits (58), Expect = 4.0, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 305 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 359
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 33.9 bits (76), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%)
Query: 69 IKFTFLIYDLNNDGFITREEMFQLLRGTNEELIKFTFLIYDLNNDGFITREEMFQ 123
+K + + D++ DG +T+EE+ + E + + D N DG+IT EE +
Sbjct: 7 LKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKADANGDGYITLEEFLE 61
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 33.9 bits (76), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 62 RGTNEELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGFIT 117
+G EE + F ++D N DG+I EE+ +L+ T E + I+ D NNDG I
Sbjct: 10 KGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 69
Query: 118 REEMFQLLR 126
+E + ++
Sbjct: 70 YDEFLEFMK 78
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 28 TEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITRE 87
TEE L + +F FD+ DG I L+E + L E+ I+ D NNDG I +
Sbjct: 13 TEEELSD-LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 71
Query: 88 EMFQLLRG 95
E + ++G
Sbjct: 72 EFLEFMKG 79
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 33.9 bits (76), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 28 TEEILMERIFCAFDRLCDGVIHLDEW----VLGLSCFLRGTNEELIKFTFLIYDLNNDGF 83
T E L E I D G + DE+ V + +G +EE + F + D N DG+
Sbjct: 53 TPEELQEMI-DEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGY 111
Query: 84 ITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGFITREEMFQLLR 126
I +E+ +L+ T E + I+ D NNDG I +E + ++
Sbjct: 112 IDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Query: 8 FDRLGSLVCRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEE 67
FD ++ R + ++ EE+ +F D+ DG I LDE + L E+
Sbjct: 74 FDEFLVMMVRSMKDDSKGKSEEEL--SDLFRMXDKNADGYIDLDELKIMLQATGETITED 131
Query: 68 LIKFTFLIYDLNNDGFITREEMFQLLRG 95
I+ D NNDG I +E + ++G
Sbjct: 132 DIEELMKDGDKNNDGRIDYDEFLEFMKG 159
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 33.5 bits (75), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 5 FCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF 60
F FD+ G ++ +EL + + E ++ + D +G I E++ ++
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 76
Query: 61 LRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGF 115
++ T+ EE I+ F ++D + +G+I+ E+ ++ E+L + D++ DG
Sbjct: 77 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 136
Query: 116 ITREEMFQLL 125
+ EE Q++
Sbjct: 137 VNYEEFVQMM 146
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The
Cardiac Regulatory Protein Troponin C
Length = 72
Score = 33.5 bits (75), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 36 IFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRG 95
+F FD+ DG I LDE + L E+ I+ D NNDG I +E + ++G
Sbjct: 11 LFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 70
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 63 GTNEELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGFITR 118
G +EE + F ++D N DG+I +E+ +L+ T E + I+ D NNDG I
Sbjct: 2 GKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 61
Query: 119 EEMFQLLR 126
+E + ++
Sbjct: 62 DEFLEFMK 69
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 33.1 bits (74), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 5 FCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF 60
F FD+ G ++ +EL + + E ++ + D +G I E++ ++
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 76
Query: 61 LRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGF 115
++ T+ EE I+ F ++D + +G+I+ E+ ++ E+L + D++ DG
Sbjct: 77 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQ 136
Query: 116 ITREEMFQLL 125
+ EE Q++
Sbjct: 137 VNYEEFVQMM 146
Score = 26.6 bits (57), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 33.1 bits (74), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 63/133 (47%), Gaps = 9/133 (6%)
Query: 2 ERIFCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGL 57
+ F FD+ G ++ +EL + + E ++ + D +G I E++ +
Sbjct: 17 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 76
Query: 58 SCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNN 112
+ ++ T+ EE I+ F ++D + +G+I+ E+ ++ E+L + D++
Sbjct: 77 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 136
Query: 113 DGFITREEMFQLL 125
DG + EE Q++
Sbjct: 137 DGQVNYEEFVQMM 149
Score = 26.6 bits (57), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 9 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 63
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 33.1 bits (74), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 5 FCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF 60
F FD+ G ++ +EL + + E ++ + D +G I E++ ++
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 76
Query: 61 LRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGF 115
++ T+ EE I+ F ++D + +G+I+ E+ ++ E+L + D++ DG
Sbjct: 77 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 136
Query: 116 ITREEMFQLL 125
+ EE Q++
Sbjct: 137 VNYEEFVQMM 146
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 33.1 bits (74), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 5 FCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF 60
F FD+ G ++ +EL + + E ++ + D +G I E++ ++
Sbjct: 14 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 73
Query: 61 LRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGF 115
++ T+ EE I+ F ++D + +G+I+ E+ ++ E+L + D++ DG
Sbjct: 74 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 133
Query: 116 ITREEMFQLL 125
+ EE Q++
Sbjct: 134 VNYEEFVQMM 143
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 3 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 57
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 33.1 bits (74), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 5 FCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF 60
F FD+ G ++ +EL + + E ++ + D +G I E++ ++
Sbjct: 18 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 77
Query: 61 LRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGF 115
++ T+ EE I+ F ++D + +G+I+ E+ ++ E+L + D++ DG
Sbjct: 78 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 137
Query: 116 ITREEMFQLL 125
+ EE Q++
Sbjct: 138 VNYEEFVQMM 147
Score = 26.6 bits (57), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 7 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 61
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 33.1 bits (74), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 5 FCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF 60
F FD+ G ++ +EL + + E ++ + D +G I E++ ++
Sbjct: 14 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 73
Query: 61 LRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGF 115
++ T+ EE I+ F ++D + +G+I+ E+ ++ E+L + D++ DG
Sbjct: 74 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 133
Query: 116 ITREEMFQLL 125
+ EE Q++
Sbjct: 134 VNYEEFVQMM 143
Score = 26.9 bits (58), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 63 GTNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 2 ATEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 57
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 33.1 bits (74), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 5 FCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF 60
F FD+ G ++ +EL + + E ++ + D +G I E++ ++
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 76
Query: 61 LRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGF 115
++ T+ EE I+ F ++D + +G+I+ E+ ++ E+L + D++ DG
Sbjct: 77 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 136
Query: 116 ITREEMFQLL 125
+ EE Q++
Sbjct: 137 VNYEEFVQMM 146
Score = 26.6 bits (57), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 33.1 bits (74), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 5 FCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF 60
F FD+ G ++ +EL + + E ++ + D +G I E++ ++
Sbjct: 14 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 73
Query: 61 LRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGF 115
++ T+ EE I+ F ++D + +G+I+ E+ ++ E+L + D++ DG
Sbjct: 74 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 133
Query: 116 ITREEMFQLL 125
+ EE Q++
Sbjct: 134 VNYEEFVQMM 143
Score = 26.6 bits (57), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 3 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 57
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 33.1 bits (74), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 62 RGTNEELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGFIT 117
+G EE + F ++D N DG+I EE+ +L+ T E + I+ D NNDG I
Sbjct: 5 KGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 64
Query: 118 REEMFQLLR 126
+E + ++
Sbjct: 65 YDEFLEFMK 73
Score = 32.3 bits (72), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 28 TEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITRE 87
TEE L + +F FD+ DG I L+E + L E+ I+ D NNDG I +
Sbjct: 8 TEEELSD-LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 66
Query: 88 EMFQLLRG 95
E + ++G
Sbjct: 67 EFLEFMKG 74
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 33.1 bits (74), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 5 FCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF 60
F FD+ G ++ +EL + + E ++ + D +G I E++ ++
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 75
Query: 61 LRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGF 115
++ T+ EE I+ F ++D + +G+I+ E+ ++ E+L + D++ DG
Sbjct: 76 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 135
Query: 116 ITREEMFQLL 125
+ EE Q++
Sbjct: 136 VNYEEFVQMM 145
Score = 26.6 bits (57), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 59
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 33.1 bits (74), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 5 FCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF 60
F FD+ G ++ +EL + + E ++ + D +G I E++ ++
Sbjct: 15 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 74
Query: 61 LRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGF 115
++ T+ EE I+ F ++D + +G+I+ E+ ++ E+L + D++ DG
Sbjct: 75 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 134
Query: 116 ITREEMFQLL 125
+ EE Q++
Sbjct: 135 VNYEEFVQMM 144
Score = 26.6 bits (57), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 4 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 58
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 33.1 bits (74), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 5 FCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF 60
F FD+ G ++ +EL + + E ++ + D +G I E++ ++
Sbjct: 22 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 81
Query: 61 LRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGF 115
++ T+ EE I+ F ++D + +G+I+ E+ ++ E+L + D++ DG
Sbjct: 82 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 141
Query: 116 ITREEMFQLL 125
+ EE Q++
Sbjct: 142 VNYEEFVQMM 151
Score = 26.6 bits (57), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 11 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 65
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 33.1 bits (74), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 5 FCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF 60
F FD+ G ++ +EL + + E ++ + D +G I E++ ++
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 75
Query: 61 LRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGF 115
++ T+ EE I+ F ++D + +G+I+ E+ ++ E+L + D++ DG
Sbjct: 76 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 135
Query: 116 ITREEMFQLL 125
+ EE Q++
Sbjct: 136 VNYEEFVQMM 145
Score = 26.6 bits (57), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 59
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 33.1 bits (74), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 5 FCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF 60
F FD+ G ++ +EL + + E ++ + D +G I E++ ++
Sbjct: 13 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 72
Query: 61 LRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGF 115
++ T+ EE I+ F ++D + +G+I+ E+ ++ E+L + D++ DG
Sbjct: 73 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 132
Query: 116 ITREEMFQLL 125
+ EE Q++
Sbjct: 133 VNYEEFVQMM 142
Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 2 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 56
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 33.1 bits (74), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 5 FCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF 60
F FD+ G ++ +EL + + E ++ + D +G I E++ ++
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 76
Query: 61 LRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGF 115
++ T+ EE I+ F ++D + +G+I+ E+ ++ E+L + D++ DG
Sbjct: 77 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 136
Query: 116 ITREEMFQLL 125
+ EE Q++
Sbjct: 137 VNYEEFVQMM 146
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 33.1 bits (74), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 5 FCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF 60
F FD+ G ++ +EL + + E ++ + D +G I E++ ++
Sbjct: 12 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 71
Query: 61 LRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGF 115
++ T+ EE I+ F ++D + +G+I+ E+ ++ E+L + D++ DG
Sbjct: 72 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 131
Query: 116 ITREEMFQLL 125
+ EE Q++
Sbjct: 132 VNYEEFVQMM 141
Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 55
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 32.7 bits (73), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Query: 24 FDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFL--RGTNEELIKFTFLIYDLNND 81
F+ EEI +++ D+ G I +E++ ++ + R + EE++K F ++D +N
Sbjct: 59 FEPKKEEI--KKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILK-AFRLFDDDNS 115
Query: 82 GFITREEMFQLLR--GTN--EELIKFTFLIYDLNNDGFITREEMFQLLRYS 128
G IT +++ ++ + G N EE ++ D N+D I +E ++++ +
Sbjct: 116 GTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKT 166
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 32.3 bits (72), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 64/131 (48%), Gaps = 11/131 (8%)
Query: 5 FCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF 60
F FD+ G ++ +EL + + E ++ + D +G I E++ ++
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 76
Query: 61 LRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRG-----TNEELIKFTFLIYDLNNDG 114
++ T+ EE I+ F ++D + +G+I+ E+ ++ T+EE+ + D++ DG
Sbjct: 77 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEM-IREADIDGDG 135
Query: 115 FITREEMFQLL 125
+ EE Q++
Sbjct: 136 QVNYEEFVQMM 146
Score = 26.6 bits (57), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 32.3 bits (72), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 64/131 (48%), Gaps = 11/131 (8%)
Query: 5 FCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF 60
F FD+ G ++ +EL + + E ++ + D +G I E++ ++
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 75
Query: 61 LRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRG-----TNEELIKFTFLIYDLNNDG 114
++ T+ EE I+ F ++D + +G+I+ E+ ++ T+EE+ + D++ DG
Sbjct: 76 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEM-IREADIDGDG 134
Query: 115 FITREEMFQLL 125
+ EE Q++
Sbjct: 135 QVNYEEFVQMM 145
Score = 26.6 bits (57), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 59
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 32.3 bits (72), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 63/133 (47%), Gaps = 9/133 (6%)
Query: 2 ERIFCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGL 57
+ F FD+ G ++ +EL + + E ++ + D +G I E++ +
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLM 72
Query: 58 SCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNN 112
+ ++ T+ EE +K F ++D + +GFI+ E+ ++ E+L + D++
Sbjct: 73 ARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDG 132
Query: 113 DGFITREEMFQLL 125
DG + EE Q++
Sbjct: 133 DGQVNYEEFVQVM 145
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T+E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 5 TDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 59
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 61 LRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRG-------TNEELIKFTFLIYDLNND 113
L+G + +K F I D + GFI EE+ +L+G N+ K D ++D
Sbjct: 35 LKGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHD 94
Query: 114 GFITREEMFQLLRYS 128
G I +E +++ +
Sbjct: 95 GKIGADEFAKMVAQA 109
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 63/133 (47%), Gaps = 9/133 (6%)
Query: 2 ERIFCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGL 57
+ F FD+ G ++ +EL + + E ++ + D +G I E++ +
Sbjct: 10 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLM 69
Query: 58 SCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNN 112
+ ++ T+ EE +K F ++D + +GFI+ E+ ++ E+L + D++
Sbjct: 70 ARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDG 129
Query: 113 DGFITREEMFQLL 125
DG + EE Q++
Sbjct: 130 DGQVNYEEFVQVM 142
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T+E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 2 TDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 56
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 63/133 (47%), Gaps = 9/133 (6%)
Query: 2 ERIFCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGL 57
+ F FD+ G ++ +EL + + E ++ + D +G I E++ +
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLM 72
Query: 58 SCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNN 112
+ ++ T+ EE +K F ++D + +GFI+ E+ ++ E+L + D++
Sbjct: 73 ARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDG 132
Query: 113 DGFITREEMFQLL 125
DG + EE Q++
Sbjct: 133 DGQVNYEEFVQVM 145
Score = 27.3 bits (59), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T+E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 5 TDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 59
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 32.0 bits (71), Expect = 0.13, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 8 FDRLGSLVCRELLHNTFDLVTEEILME--RIFCAFDRLCDGVIHLDEWVLGLSCFLRGTN 65
F G+++ +L +NT D +TEE + E F FD+ DG I + LG G N
Sbjct: 286 FKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGGITTKQ--LGTVMRSLGQN 343
Query: 66 EELIKFTFLIYDLNNDG--------FITREEMFQLLRGTN-EELIKFTFLIYDLNNDGFI 116
+ +I ++ DG F+T M + ++ T+ EE I+ F ++ + +G+I
Sbjct: 344 PTEAELQDMINEVGADGNGTIDFPQFLTM--MARKMKDTDSEEEIREAFRVFGKDGNGYI 401
Query: 117 TREEMFQLL 125
+ ++ ++
Sbjct: 402 SAAQLRHVM 410
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 10/109 (9%)
Query: 1 MERIFCAFDRLGSLVCRELLHNTF-------DLVTEEILMERIFCAFDRLCDGVIHLDEW 53
+ R F DR GS R L + F LV ++ E + +DR G + L+E+
Sbjct: 39 LARFFRQLDRDGS---RSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEF 95
Query: 54 VLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRGTNEELIK 102
+ L + E +I F D + DG +T +++ + G ++
Sbjct: 96 LRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVR 144
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%)
Query: 36 IFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRG 95
+F FD+ DG I L+E + L E+ I+ D NNDG I +E + ++G
Sbjct: 10 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 69
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 64 TNEELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGFITRE 119
+EE + F ++D N DG+I EE+ +L+ T E + I+ D NNDG I +
Sbjct: 2 KSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 61
Query: 120 EMFQLLR 126
E + ++
Sbjct: 62 EFLEFMK 68
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 5 FCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF 60
F FD+ G ++ +EL + + E ++ + D +G I E++ ++
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 75
Query: 61 LRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEELI--KFTFLIYDLN--NDGF 115
++ T+ EE I+ F ++D + +G+I+ E+ ++ E+L + +I + N DG
Sbjct: 76 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQ 135
Query: 116 ITREEMFQLL 125
+ EE Q++
Sbjct: 136 VNYEEFVQMM 145
Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 59
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 31.2 bits (69), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 61/130 (46%), Gaps = 9/130 (6%)
Query: 5 FCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF 60
F FD+ G ++ +EL + + E ++ + D +G I E++ ++
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 76
Query: 61 LRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGF 115
++ T+ EE I+ F ++D + +GFI+ E+ ++ E+L + D++ DG
Sbjct: 77 MKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 136
Query: 116 ITREEMFQLL 125
+ EE ++
Sbjct: 137 VNYEEFVTMM 146
Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 31.2 bits (69), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 61/130 (46%), Gaps = 9/130 (6%)
Query: 5 FCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF 60
F FD+ G ++ +EL + + E ++ + D +G I E++ ++
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 76
Query: 61 LRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGF 115
++ T+ EE I+ F ++D + +GFI+ E+ ++ E+L + D++ DG
Sbjct: 77 MKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 136
Query: 116 ITREEMFQLL 125
+ EE ++
Sbjct: 137 VNYEEFVTMM 146
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 61/130 (46%), Gaps = 9/130 (6%)
Query: 5 FCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF 60
F FD+ G ++ +EL + + E ++ + D +G I E++ ++
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 75
Query: 61 LRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGF 115
++ T+ EE I+ F ++D + +GFI+ E+ ++ E+L + D++ DG
Sbjct: 76 MKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 135
Query: 116 ITREEMFQLL 125
+ EE ++
Sbjct: 136 VNYEEFVTMM 145
Score = 26.6 bits (57), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 59
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 61/130 (46%), Gaps = 9/130 (6%)
Query: 5 FCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF 60
F FD+ G ++ +EL + + E ++ + D +G I E++ ++
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 75
Query: 61 LRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGF 115
++ T+ EE I+ F ++D + +GFI+ E+ ++ E+L + D++ DG
Sbjct: 76 MKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 135
Query: 116 ITREEMFQLL 125
+ EE ++
Sbjct: 136 VNYEEFVTMM 145
Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 59
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 61/130 (46%), Gaps = 9/130 (6%)
Query: 5 FCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF 60
F FD+ G ++ +EL + + E ++ + D +G I E++ ++
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 76
Query: 61 LRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGF 115
++ T+ EE I+ F ++D + +GFI+ E+ ++ E+L + D++ DG
Sbjct: 77 MKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQ 136
Query: 116 ITREEMFQLL 125
+ EE ++
Sbjct: 137 VNYEEFVTMM 146
Score = 26.6 bits (57), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 30.8 bits (68), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
Query: 61 LRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL-------IKFTFLIYDLNND 113
L+ + + +K F I D + DGFI +E+ +L+G + + K D + D
Sbjct: 35 LKKKSADDVKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGD 94
Query: 114 GFITREEMFQLLRYS 128
G I EE L+ S
Sbjct: 95 GKIGVEEFSTLVAES 109
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 20/125 (16%)
Query: 35 RIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNE-----ELIKFTFL---IYDLNNDGFITR 86
+ + +D G I +E L L N+ +L ++T L ++D NNDG +
Sbjct: 107 KTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLEL 166
Query: 87 EEMFQLLRGTNEELIKF------------TFLIYDLNNDGFITREEMFQLLRYSRNQSYN 134
EM +LL L+KF F +YD + +G+I E+ LL+ ++
Sbjct: 167 TEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEKNKQ 226
Query: 135 RLDLN 139
LD+N
Sbjct: 227 ELDIN 231
Score = 30.4 bits (67), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 13/77 (16%)
Query: 66 EELIKFTFLIYDLNNDGFITREEMFQLLRG---------TNEELIKFTFL---IYDLNND 113
EE +K T+ YD ++ GFI EE+ L+ + +L ++T L ++D NND
Sbjct: 103 EEFMK-TWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNND 161
Query: 114 GFITREEMFQLLRYSRN 130
G + EM +LL N
Sbjct: 162 GKLELTEMARLLPVQEN 178
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 30.8 bits (68), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 7 AFDRLGSLVCRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNE 66
F +L + ++ N L+ E + +F FD+ G I LDEW ++
Sbjct: 91 GFKQLATSELKKWARNEPTLIRE--WGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQ 148
Query: 67 ELIKFTFLIYDLNNDGFITREEM 89
E + TF DL+N G + +EM
Sbjct: 149 EDCEATFRHCDLDNSGDLDVDEM 171
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 30.8 bits (68), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 19/26 (73%)
Query: 69 IKFTFLIYDLNNDGFITREEMFQLLR 94
+ F F +YDL+ D I+R+E+ Q+LR
Sbjct: 115 LHFAFRLYDLDKDDKISRDELLQVLR 140
Score = 30.8 bits (68), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 19/26 (73%)
Query: 101 IKFTFLIYDLNNDGFITREEMFQLLR 126
+ F F +YDL+ D I+R+E+ Q+LR
Sbjct: 115 LHFAFRLYDLDKDDKISRDELLQVLR 140
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 30.4 bits (67), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 2 ERIFCAFDRLGS--LVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGL 57
+ F FD+ G + +EL + + E ++ + D +G I E++ +
Sbjct: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLM 73
Query: 58 SCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNN 112
+ ++ T+ EE +K F ++D + +GFI+ E+ ++ E+L + D++
Sbjct: 74 ARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDG 133
Query: 113 DGFITREEMFQLL 125
DG I EE +++
Sbjct: 134 DGQINYEEFVKVM 146
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 30.0 bits (66), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 19/26 (73%)
Query: 69 IKFTFLIYDLNNDGFITREEMFQLLR 94
+ F F +YDL+ D I+R+E+ Q+LR
Sbjct: 115 LHFAFRLYDLDKDEKISRDELLQVLR 140
Score = 30.0 bits (66), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 19/26 (73%)
Query: 101 IKFTFLIYDLNNDGFITREEMFQLLR 126
+ F F +YDL+ D I+R+E+ Q+LR
Sbjct: 115 LHFAFRLYDLDKDEKISRDELLQVLR 140
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 60/129 (46%), Gaps = 9/129 (6%)
Query: 5 FCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF 60
F FD+ G ++ +EL + + E ++ + D +G I E++ ++
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 75
Query: 61 LRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGFI 116
++ + EE I+ F ++D + +GFI+ E+ ++ E+L + D++ DG +
Sbjct: 76 MKDSEEE-IREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 134
Query: 117 TREEMFQLL 125
EE ++
Sbjct: 135 NYEEFVTMM 143
Score = 26.6 bits (57), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 59
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
Query: 59 CFLRGTNEELIKFTFLIYDLNNDGFITREEM---FQLLRG-----TNEELIKFTFLIYDL 110
C L G + + IK F+ D + GFI +E+ Q+ + T+ E F D
Sbjct: 34 CGLSGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAF-LKAGDS 92
Query: 111 NNDGFITREEMFQLLR 126
+ DG I EE L++
Sbjct: 93 DGDGAIGVEEWVALVK 108
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
Query: 59 CFLRGTNEELIKFTFLIYDLNNDGFITREEM---FQLLRG-----TNEELIKFTFLIYDL 110
C L G + + IK F+ D + GFI +E+ Q+ + T+ E F D
Sbjct: 33 CGLSGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAF-LKAGDS 91
Query: 111 NNDGFITREEMFQLLR 126
+ DG I EE L++
Sbjct: 92 DGDGAIGVEEWVALVK 107
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 30.0 bits (66), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 34 ERIFCAFDRLCDGVIHLDEWVL--GLSCFLRGTNEELIKFTFLIYDLNNDGFITREEM 89
E +F FD+ G I LDEW G+S ++E + TF DL+N G + +EM
Sbjct: 119 EAVFDIFDKDGSGSISLDEWKTYGGISGIC--PSDEDAEKTFKHCDLDNSGKLDVDEM 174
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 29.6 bits (65), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 60 FLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL-----IKFTFLIYDLNNDG 114
++R +EE I F ++D N DG I +E +++ EE ++ D + +G
Sbjct: 1 WVRQDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNG 60
Query: 115 FITREEMFQLLRYSRN 130
I E L++ S+N
Sbjct: 61 VIDIPEFMDLIKKSKN 76
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 29.6 bits (65), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 33 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFI 84
MERIF FD DG I L E L L T+ + ++ D + DGFI
Sbjct: 5 MERIFKRFDTNGDGKISLSELTDALRT-LGSTSADEVQRMMAEIDTDGDGFI 55
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 29.6 bits (65), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 33 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFI 84
MERIF FD DG I L E L L T+ + ++ D + DGFI
Sbjct: 4 MERIFKRFDTNGDGKISLSELTDALRT-LGSTSADEVQRMMAEIDTDGDGFI 54
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 29.6 bits (65), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 67 ELIKFTFLIYDLNNDGFITREEMFQLLRG----TNEELIKFTFLIYDLNNDGFITREEMF 122
E I+ F ++D + +GFI+++E+ +R NE ++ D++ DG + EE
Sbjct: 36 EEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFV 95
Query: 123 QLL 125
LL
Sbjct: 96 TLL 98
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 29.6 bits (65), Expect = 0.71, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 65 NEELIKFTFLIYDLNNDGFITREEMFQLLRGT 96
+EE + F I+D N DG+I EE+ ++LR T
Sbjct: 3 SEEELANAFRIFDKNADGYIDIEELGEILRAT 34
Score = 27.7 bits (60), Expect = 2.5, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 97 NEELIKFTFLIYDLNNDGFITREEMFQLLR 126
+EE + F I+D N DG+I EE+ ++LR
Sbjct: 3 SEEELANAFRIFDKNADGYIDIEELGEILR 32
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 29.6 bits (65), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 9/71 (12%)
Query: 65 NEELIKFTFLIYDLNNDGFITREEMFQLLRGTNEE---------LIKFTFLIYDLNNDGF 115
+++LI F ++D++NDG IT E+ +L N++ +K D NNDG
Sbjct: 120 SKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGK 179
Query: 116 ITREEMFQLLR 126
I E ++++
Sbjct: 180 IDFHEFSEMMK 190
Score = 29.3 bits (64), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 42/121 (34%)
Query: 55 LGLSCFLRGTNE---ELIKFTFLIYDLNNDGFITREEM--------------FQLL---- 93
L ++ + +N+ E +K TFL+ D + G+IT+E++ F LL
Sbjct: 37 LAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPYNFDLLLDQI 96
Query: 94 --------------------RGTNEELIKFTFLIYDLNNDGFITREEMFQLLRYSRNQSY 133
+ +++LI F ++D++NDG IT E+ +L Y+ N+
Sbjct: 97 DSDGSGKIDYTEFIAAALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHIL-YNGNKKG 155
Query: 134 N 134
N
Sbjct: 156 N 156
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 29.3 bits (64), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 7 AFDRLGSLVCRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNE 66
+ +L + ++ N L+ E + +F FD+ G I LDEW ++
Sbjct: 91 GWKQLATSELKKWARNEPTLIRE--WGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQ 148
Query: 67 ELIKFTFLIYDLNNDGFITREEM 89
E + TF DL+N G + +EM
Sbjct: 149 EDCEATFRHCDLDNSGDLDVDEM 171
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 29.3 bits (64), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 7 AFDRLGSLVCRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNE 66
+ +L + ++ N L+ E + +F FD+ G I LDEW ++
Sbjct: 91 GWKQLATSELKKWARNEPTLIRE--WGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQ 148
Query: 67 ELIKFTFLIYDLNNDGFITREEM 89
E + TF DL+N G + +EM
Sbjct: 149 EDCEATFRHCDLDNSGDLDVDEM 171
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 29.3 bits (64), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 10/61 (16%)
Query: 34 ERIFCAFDRLCDGVIHLDEW-----VLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREE 88
+ +F FD+ G I LDEW + G+S +EE + TF DL+N G + +E
Sbjct: 116 DAVFDIFDKDGSGTITLDEWKAYGRISGIS-----PSEEDCEKTFQHCDLDNSGELDVDE 170
Query: 89 M 89
M
Sbjct: 171 M 171
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 29.3 bits (64), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 2 ERIFCAFDRLGS--LVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGL 57
+ F FD+ G + +EL + + E ++ + D +G I E++ +
Sbjct: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLM 73
Query: 58 SCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNN 112
+ ++ T+ EE +K F ++D + +GFI+ E+ ++ E+L + D++
Sbjct: 74 ARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDG 133
Query: 113 DGFITREEMFQLL 125
DG I +E +++
Sbjct: 134 DGQINYDEFVKVM 146
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 56/130 (43%), Gaps = 9/130 (6%)
Query: 3 RIFCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLS 58
F FD+ G ++ +EL + + E ++ D +G I+ E++ +
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINFPEFLTXXA 73
Query: 59 -CFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNND 113
C +EE I+ F ++D + +G+I+ E+ + E+L + D++ D
Sbjct: 74 RCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGD 133
Query: 114 GFITREEMFQ 123
G + EE Q
Sbjct: 134 GQVNYEEFVQ 143
>pdb|2Y3N|B Chain B, Type Ii Cohesin-Dockerin Domain From Bacteroides
Cellolosolvens
pdb|2Y3N|D Chain D, Type Ii Cohesin-Dockerin Domain From Bacteroides
Cellolosolvens
Length = 71
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 17/66 (25%)
Query: 71 FTFLIYDLNNDGFITREEMFQLLR---------GTNEELIKFTFLIYDLNNDGFITREEM 121
F L DLN DG I ++ L + G NE+ DLNNDG I ++
Sbjct: 2 FVKLKGDLNGDGVINMADVMILAQSFGKAIGNPGVNEK--------ADLNNDGVINSDDA 53
Query: 122 FQLLRY 127
L +Y
Sbjct: 54 IILAQY 59
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 65 NEELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGFITREE 120
+EE I+ F ++D + +G+I+ E+ ++ E+L + D++ DG + EE
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 62
Query: 121 MFQLL 125
Q++
Sbjct: 63 FVQMM 67
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 7 AFDRLGSLVCRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNE 66
+ +L + ++ N L+ E + +F FD+ G I LDEW ++
Sbjct: 91 GWKQLATSELKKWARNEPTLIRE--WGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQ 148
Query: 67 ELIKFTFLIYDLNNDGFITREEM 89
E + TF DL+N G + +EM
Sbjct: 149 EDCEATFRHCDLDNAGDLDVDEM 171
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 65 NEELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGFITREE 120
+EE I+ F ++D + +G+I+ E+ ++ E+L + D++ DG + EE
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 62
Query: 121 MFQLL 125
Q++
Sbjct: 63 FVQMM 67
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 65 NEELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGFITREE 120
+EE I+ F ++D + +G+I+ E+ ++ E+L + D++ DG + EE
Sbjct: 7 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 66
Query: 121 MFQLL 125
Q++
Sbjct: 67 FVQMM 71
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Query: 33 MERIFCAFDRLCDGVIHLDEW---VLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREE 88
+R+F FD+ DG + LDE+ L S + T E+++KF F D++ +G + +E
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYF--TQEDIVKF-FEEIDVDGNGELNADE 58
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 65 NEELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGFITREE 120
+EE I+ F ++D + +G+I+ E+ ++ E+L + D++ DG + EE
Sbjct: 6 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 65
Query: 121 MFQLL 125
Q++
Sbjct: 66 FVQMM 70
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 65 NEELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGFITREE 120
+EE I+ F ++D + +G+I+ E+ ++ E+L + D++ DG + EE
Sbjct: 4 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 63
Query: 121 MFQLL 125
Q++
Sbjct: 64 FVQMM 68
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 56/128 (43%), Gaps = 9/128 (7%)
Query: 5 FCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF 60
F FD+ G ++ +EL + + E ++ D +G I E++ +
Sbjct: 17 FSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLTXXARK 76
Query: 61 LRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGF 115
+ T+ EE I+ F ++D + +G+I+ E+ + E+L + D++ DG
Sbjct: 77 XKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQ 136
Query: 116 ITREEMFQ 123
+ EE Q
Sbjct: 137 VNYEEFVQ 144
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 27 VTEEILME--RIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDL--NNDG 82
+TEE + E F FD+ G I E LG G N + LI + NN+G
Sbjct: 4 LTEEQIAEFKDAFVQFDKEGTGKIATRE--LGTLMRTLGQNPTEAELQDLIAEAENNNNG 61
Query: 83 FITREE----MFQLLRGTN-EELIKFTFLIYDLNNDGFITREEM 121
+ E M + +R T+ EE ++ F I+D + DGFI+ E+
Sbjct: 62 QLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAEL 105
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 66 EELIKFTFLIYDLNNDGFITREE----MFQLLRGTNEELIKFTFLIYDLNNDGFITREEM 121
EE +K F ++D + +G+I+ E M L +E ++ DL+ DG + EE
Sbjct: 8 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEF 67
Query: 122 FQLL 125
+++
Sbjct: 68 VKMM 71
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 73 FLIYDLNNDGFITREEMFQLLR---GTNEELIKFTFLIYDLNNDGFITREEMFQLLRYSR 129
F +D N DG I+ E+ + L+ + +K D + DGFI+ +E R +R
Sbjct: 15 FKRFDANGDGKISAAELGEALKTLGSITPDEVKHMMAEIDTDGDGFISFQEFTDFGRANR 74
Query: 130 N 130
Sbjct: 75 G 75
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 66 EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGFITREEM 121
EE I+ F ++D + +G+I+ E+ ++ E+L + D++ DG + EE
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 60
Query: 122 FQLL 125
Q++
Sbjct: 61 VQMM 64
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 56/128 (43%), Gaps = 9/128 (7%)
Query: 5 FCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF 60
F FD+ G ++ +EL + + E ++ D +G I E++ +
Sbjct: 16 FSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLTXXARK 75
Query: 61 LRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGF 115
+ T+ EE I+ F ++D + +G+I+ E+ + E+L + D++ DG
Sbjct: 76 XKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQ 135
Query: 116 ITREEMFQ 123
+ EE Q
Sbjct: 136 VNYEEFVQ 143
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
Query: 61 LRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRGTNEELIKFT-------FLIYDLNND 113
L+ + + +K F I D + GFI +E+ +L+G + + + D + D
Sbjct: 35 LKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGD 94
Query: 114 GFITREEMFQLLRYS 128
G I EE L+ S
Sbjct: 95 GKIGVEEFSTLVAES 109
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 66 EELIKFTFLIYDLNNDGFITREE----MFQLLRGTNEELIKFTFLIYDLNNDGFITREEM 121
EE +K F ++D + +G+I+ E M L +E ++ DL+ DG + EE
Sbjct: 3 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEF 62
Query: 122 FQLLRYSR 129
+++ R
Sbjct: 63 VKMMMTVR 70
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
Query: 61 LRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL-------IKFTFLIYDLNND 113
L+ + + +K F I D + GFI +E+ +L+G + + K D + D
Sbjct: 35 LKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGD 94
Query: 114 GFITREEMFQLLRYS 128
G I EE L+ S
Sbjct: 95 GKIGVEEFSTLVAES 109
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 58/112 (51%), Gaps = 11/112 (9%)
Query: 24 FDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFL--RGTNEELIKFTFLIYDLNND 81
F+ EEI +++ D+ G I +E++ ++ + R + EE++K F ++D +
Sbjct: 39 FEPKKEEI--KKMIADIDKDGSGTIDFEEFLQMMTAKMGERDSREEIMK-AFRLFDDDET 95
Query: 82 GFITREEMFQLLRG-----TNEELIKFTFLIYDLNNDGFITREEMFQLLRYS 128
G I+ + + ++ + T+EEL + D + DG + EE F++++ +
Sbjct: 96 GKISFKNLKRVAKELGENMTDEELQEM-IDEADRDGDGEVNEEEFFRIMKKT 146
>pdb|2DCL|A Chain A, Structure Of Ph1503 Protein From Pyrococcus Horikoshii Ot3
pdb|2DCL|B Chain B, Structure Of Ph1503 Protein From Pyrococcus Horikoshii Ot3
pdb|2DCL|C Chain C, Structure Of Ph1503 Protein From Pyrococcus Horikoshii Ot3
Length = 127
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 62 RGTNEELIKFTFLIYDLNNDGFITREEMFQLLRGTNEELIKF 103
RG N E K +I + DG IT E L GT EE+ KF
Sbjct: 79 RGHNIE--KVVNVIKPMIKDGMITVEPTIVLWVGTQEEIKKF 118
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 61 LRGTNEELIKFTFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLI--YDLNNDGFI 116
L ++ K F ++D +ND +T EE+ ++R G N K + ++ YD +N G
Sbjct: 8 LTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKF 67
Query: 117 TRE 119
+E
Sbjct: 68 DQE 70
>pdb|2SCP|A Chain A, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Nereis Diversicolor Refined At 2.0 Angstroms Resolution
pdb|2SCP|B Chain B, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Nereis Diversicolor Refined At 2.0 Angstroms Resolution
pdb|1Q80|A Chain A, Solution Structure And Dynamics Of Nereis Sarcoplasmic
Calcium Binding Protein
Length = 174
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 73 FLIYDLNNDGFITREE--MFQLLRGTNEELIKFTFLIYDLNNDGFITREE 120
F D N D I+R+E +F + G ++ + +F D NNDG ++ EE
Sbjct: 100 FRAVDTNEDNNISRDEYGIFFGMLGLDKTMAPASFDAIDTNNDGLLSLEE 149
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 65 NEELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGFITREE 120
+EE +K F ++D + +GFI+ E+ ++ E+L + D++ DG I EE
Sbjct: 2 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 61
Query: 121 MFQLL 125
+++
Sbjct: 62 FVKVM 66
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 7 AFDRLGSLVCRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNE 66
+ +L + ++ N L+ E + +F FD+ G I LDEW ++
Sbjct: 91 GWKQLATSELKKWARNEPTLIRE--WGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQ 148
Query: 67 ELIKFTFLIYDLNNDGFITREEM 89
E + TF DL++ G + +EM
Sbjct: 149 EDCEATFRHCDLDDSGDLDVDEM 171
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F +YD + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 5 TEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADG 59
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 7/67 (10%)
Query: 69 IKFTFLIYDLNNDGFITREEMFQLLRGTNEEL-------IKFTFLIYDLNNDGFITREEM 121
+K F I D + GFI +E+ +L+G + + K D + DG I EE
Sbjct: 7 VKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEF 66
Query: 122 FQLLRYS 128
L+ S
Sbjct: 67 STLVAES 73
>pdb|2VSA|A Chain A, Structure And Mode Of Action Of A Mosquitocidal Holotoxin
pdb|2VSE|A Chain A, Structure And Mode Of Action Of A Mosquitocidal Holotoxin
pdb|2VSE|B Chain B, Structure And Mode Of Action Of A Mosquitocidal Holotoxin
Length = 841
Score = 27.3 bits (59), Expect = 2.9, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 64 TNEELIKFTFLIYDLNNDGFITR 86
TN++L + ++ Y+ N DGFI R
Sbjct: 773 TNDDLRSYWYVEYNFNKDGFIIR 795
Score = 27.3 bits (59), Expect = 2.9, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 96 TNEELIKFTFLIYDLNNDGFITR 118
TN++L + ++ Y+ N DGFI R
Sbjct: 773 TNDDLRSYWYVEYNFNKDGFIIR 795
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 5 TEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 59
Score = 26.6 bits (57), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 61/131 (46%), Gaps = 11/131 (8%)
Query: 5 FCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF 60
F FD+ G ++ +EL + + E ++ + D +G I E++ ++
Sbjct: 16 FALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARK 75
Query: 61 LR--GTNEELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDG 114
++ + EELI+ F ++D + +G I+ E+ ++ E+L + D++ DG
Sbjct: 76 MKEQDSEEELIE-AFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDG 134
Query: 115 FITREEMFQLL 125
I EE +++
Sbjct: 135 HINYEEFVRMM 145
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 5 TEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 59
Score = 26.6 bits (57), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 61/131 (46%), Gaps = 11/131 (8%)
Query: 5 FCAFDRLG--SLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF 60
F FD+ G ++ +EL + + E ++ + D +G I E++ ++
Sbjct: 16 FALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARK 75
Query: 61 LR--GTNEELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDG 114
++ + EELI+ F ++D + +G I+ E+ ++ E+L + D++ DG
Sbjct: 76 MKEQDSEEELIE-AFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDG 134
Query: 115 FITREEMFQLL 125
I EE +++
Sbjct: 135 HINYEEFVRMM 145
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 26.9 bits (58), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 2 ERIFCAFDR--LGSLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGL 57
+ F FD+ GS+ EL + + L E + + D + I E++ +
Sbjct: 14 KEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALM 73
Query: 58 SCFLR--GTNEELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL 100
S L+ + +EL++ F ++D N DG I+ E+ +L E+L
Sbjct: 74 SRQLKCNDSEQELLE-AFKVFDKNGDGLISAAELKHVLTSIGEKL 117
>pdb|2A1R|A Chain A, Crystal Structure Of Parn Nuclease Domain
pdb|2A1R|B Chain B, Crystal Structure Of Parn Nuclease Domain
pdb|2A1S|A Chain A, Crystal Structure Of Native Parn Nuclease Domain
pdb|2A1S|B Chain B, Crystal Structure Of Native Parn Nuclease Domain
pdb|2A1S|C Chain C, Crystal Structure Of Native Parn Nuclease Domain
pdb|2A1S|D Chain D, Crystal Structure Of Native Parn Nuclease Domain
Length = 430
Score = 26.9 bits (58), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
Query: 81 DGFITREEMFQLLRGTNEELIKFTF----LIYDLNNDGFITREEMFQLLRYSRNQSYNRL 136
+GF T EE +Q L+ + + + F F YD + +IT+ F Y + +NR
Sbjct: 45 NGFDTPEERYQKLKKHSMDFLLFQFGLCTFKYDYTDSKYITKSFNF----YVFPKPFNRS 100
Query: 137 DLNVGTLC 144
+V +C
Sbjct: 101 SPDVKFVC 108
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 26.9 bits (58), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 59
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 19/117 (16%)
Query: 19 LLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDL 78
+L FDL+ ++I D G I E+ L + R +++LI F ++D+
Sbjct: 87 MLPPNFDLLLDQI---------DSDGSGNIDYTEF-LAAAIDRRQLSKKLIYCAFRVFDV 136
Query: 79 NNDGFITREEMFQLL-----RGTNEE----LIKFTFLIYDLNNDGFITREEMFQLLR 126
+NDG IT E+ +L RG E +K D N DG I E ++++
Sbjct: 137 DNDGEITTAELAHVLFNGNKRGNITERDVNQVKKMIREVDKNGDGKIDFYEFSEMMK 193
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 59
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 59
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 59
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 65 NEELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGFITREE 120
+EE I+ F + D + +G+I+ E+ ++ E+L + D++ DG + EE
Sbjct: 27 SEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 86
Query: 121 MFQLL 125
Q++
Sbjct: 87 FVQMM 91
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 26.9 bits (58), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 59
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 26.9 bits (58), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 59
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 59
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 59
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 26.6 bits (57), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 64 TNEELIKF--TFLIYDLNNDGFITREEMFQLLR--GTNEELIKFTFLIYDLNNDG 114
T+E++ +F F ++D + DG IT +E+ ++R G N + +I +++ DG
Sbjct: 5 TDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 59
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 26.2 bits (56), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 14/65 (21%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 65 NEELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGFITREE 120
+EE I+ F ++D + +G+I+ ++ ++ E+L + D++ DG + E+
Sbjct: 5 SEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYED 64
Query: 121 MFQLL 125
Q++
Sbjct: 65 FVQMM 69
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 26.2 bits (56), Expect = 8.0, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 24/114 (21%)
Query: 33 MERIFCAFDRLCDGVIHLDEWVLGLSCFLR--------------GTNEELIKFTFLIYDL 78
+ IF D DG++ DE V G F+R T E+ I + D+
Sbjct: 333 LTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDM 392
Query: 79 NNDGFITREEMFQ-------LLRGTNEELIKFTFLIYDLNNDGFITREEMFQLL 125
+ G I E LL + E ++ F ++D + G I+ +E+F+L
Sbjct: 393 DGSGSIEYSEFIASAIDRTILL---SRERMERAFKMFDKDGSGKISTKELFKLF 443
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 25.8 bits (55), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 2 ERIFCAFDR--LGSLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGL 57
+ F FD+ GS+ EL + + L E + + D + I E++ +
Sbjct: 14 KEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM 73
Query: 58 SCFLRG--TNEELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL 100
S L+ + +EL++ F ++D N DG I+ E+ +L E+L
Sbjct: 74 SRQLKSNDSEQELLE-AFKVFDKNGDGLISAAELKHVLTSIGEKL 117
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 25.8 bits (55), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 62 RGTNEELIKFTFLIYDLNNDGFITREEMFQLLR--GTN--EELIKFTFLIYDLNNDGFIT 117
R + EE++K F ++D +N G IT +++ ++ + G N EE ++ D N+D I
Sbjct: 5 RDSREEILK-AFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEID 63
Query: 118 REEMFQLLRYS 128
+E ++++ +
Sbjct: 64 EDEFIRIMKKT 74
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 25.8 bits (55), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 2 ERIFCAFDR--LGSLVCREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGL 57
+ F FD+ GS+ EL + + L E + + D + I E++ +
Sbjct: 13 KEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM 72
Query: 58 SCFLRG--TNEELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL 100
S L+ + +EL++ F ++D N DG I+ E+ +L E+L
Sbjct: 73 SRQLKSNDSEQELLE-AFKVFDKNGDGLISAAELKHVLTSIGEKL 116
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 25.8 bits (55), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 64 TNEELIKFTFLIYDLNNDGFITREEMFQLLRGTNEEL----IKFTFLIYDLNNDGFITRE 119
+ EELI+ F ++D + +G I+ E+ ++ E+L + D++ DG I E
Sbjct: 6 SEEELIE-AFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYE 64
Query: 120 EMFQLL 125
E +++
Sbjct: 65 EFVRMM 70
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.331 0.148 0.454
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,369,685
Number of Sequences: 62578
Number of extensions: 177018
Number of successful extensions: 1034
Number of sequences better than 100.0: 210
Number of HSP's better than 100.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 104
Number of HSP's that attempted gapping in prelim test: 556
Number of HSP's gapped (non-prelim): 464
length of query: 149
length of database: 14,973,337
effective HSP length: 90
effective length of query: 59
effective length of database: 9,341,317
effective search space: 551137703
effective search space used: 551137703
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 47 (22.7 bits)