Your job contains 1 sequence.
>psy9943
MSQELLPRGRNRNPLWEKFFAVNKLLKDSLSDRLSDRSRLEFISHDISDLVSDDRISAGD
FFDFLRLTESGSRKVFGPIHDIIEKAKKKKKEKKKKKKKKRKKKKKRKKKKKKKKKKKKK
KKKKKKNKNKIIKIN
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9943
(135 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|J3KNE3 - symbol:PAFAH1B2 "Platelet-activating f... 102 1.2e-05 1
UNIPROTKB|E2RN02 - symbol:PAFAH1B2 "Uncharacterized prote... 103 2.4e-05 1
UNIPROTKB|P68401 - symbol:PAFAH1B2 "Platelet-activating f... 102 3.1e-05 1
UNIPROTKB|P68402 - symbol:PAFAH1B2 "Platelet-activating f... 102 3.1e-05 1
UNIPROTKB|F2Z5V4 - symbol:PAFAH1B2 "Uncharacterized prote... 102 3.1e-05 1
MGI|MGI:108415 - symbol:Pafah1b2 "platelet-activating fac... 101 4.0e-05 1
RGD|620332 - symbol:Pafah1b2 "platelet-activating factor ... 101 4.0e-05 1
ZFIN|ZDB-GENE-060526-43 - symbol:pafah1b2 "platelet-activ... 95 0.00019 1
UNIPROTKB|F1N8K4 - symbol:PAFAH1B2 "Platelet-activating f... 95 0.00019 1
UNIPROTKB|Q5ZMS2 - symbol:PAFAH1B2 "Platelet-activating f... 95 0.00019 1
ZFIN|ZDB-GENE-040426-1026 - symbol:pafah1b3 "platelet-act... 94 0.00023 1
FB|FBgn0025809 - symbol:Paf-AHalpha "Platelet-activating ... 90 0.00066 1
>UNIPROTKB|J3KNE3 [details] [associations]
symbol:PAFAH1B2 "Platelet-activating factor acetylhydrolase
IB subunit beta" species:9606 "Homo sapiens" [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR013831 GO:GO:0016787
Gene3D:3.40.50.1110 EMBL:AP005018 HGNC:HGNC:8575 ChiTaRS:PAFAH1B2
Ensembl:ENST00000304808 Uniprot:J3KNE3
Length = 175
Score = 102 (41.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 28/79 (35%), Positives = 36/79 (45%)
Query: 5 LLPRGRNRNPLWEKFFAVNXXXXXXXXXXXXXXXXXEFISHDISDLVSDDRISAGDFFDF 64
LLPRG NPL +K VN + + D + SD IS D FDF
Sbjct: 85 LLPRGEKPNPLRQKNAKVNQLLKVSLPKLANV----QLLDTDGGFVHSDGAISCHDMFDF 140
Query: 65 LRLTESGSRKVFGPIHDII 83
L LT G K+ P+H++I
Sbjct: 141 LHLTGGGYAKICKPLHELI 159
>UNIPROTKB|E2RN02 [details] [associations]
symbol:PAFAH1B2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0016239 "positive regulation of
macroautophagy" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR013831 GO:GO:0005737 GO:GO:0007283 GO:GO:0016787
Gene3D:3.40.50.1110 GO:GO:0016239 KO:K01062 CTD:5049
GeneTree:ENSGT00390000016520 OMA:LQQYEIW EMBL:AAEX03003467
EMBL:AAEX03003468 RefSeq:XP_536562.3 Ensembl:ENSCAFT00000020998
GeneID:479425 KEGG:cfa:479425 NextBio:20854609 Uniprot:E2RN02
Length = 229
Score = 103 (41.3 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 28/79 (35%), Positives = 36/79 (45%)
Query: 5 LLPRGRNRNPLWEKFFAVNXXXXXXXXXXXXXXXXXEFISHDISDLVSDDRISAGDFFDF 64
LLPRG NPL +K VN + + D + SD IS D FDF
Sbjct: 139 LLPRGEKPNPLRQKNAKVNQLLKASLPKLANV----QLLDTDGGFVHSDGAISCHDMFDF 194
Query: 65 LRLTESGSRKVFGPIHDII 83
L LT G K+ P+H++I
Sbjct: 195 LHLTGGGYAKICKPLHELI 213
>UNIPROTKB|P68401 [details] [associations]
symbol:PAFAH1B2 "Platelet-activating factor acetylhydrolase
IB subunit beta" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016239 "positive regulation of macroautophagy"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003847 "1-alkyl-2-acetylglycerophosphocholine
esterase activity" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] InterPro:IPR013831 PROSITE:PS01098
GO:GO:0005737 GO:GO:0016042 GO:GO:0007283 Gene3D:3.40.50.1110
GO:GO:0016239 KO:K01062 GO:GO:0003847 EMBL:D49678 EMBL:BC103452
IPI:IPI00692295 RefSeq:NP_777089.1 UniGene:Bt.49728 PDB:1FXW
PDBsum:1FXW ProteinModelPortal:P68401 SMR:P68401 IntAct:P68401
STRING:P68401 PRIDE:P68401 Ensembl:ENSBTAT00000007398 GeneID:282514
KEGG:bta:282514 CTD:5049 eggNOG:NOG69837
GeneTree:ENSGT00390000016520 HOGENOM:HOG000232143
HOVERGEN:HBG053477 InParanoid:P68401 OMA:LQQYEIW OrthoDB:EOG45QHF4
EvolutionaryTrace:P68401 NextBio:20806264 Uniprot:P68401
Length = 229
Score = 102 (41.0 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 28/79 (35%), Positives = 36/79 (45%)
Query: 5 LLPRGRNRNPLWEKFFAVNXXXXXXXXXXXXXXXXXEFISHDISDLVSDDRISAGDFFDF 64
LLPRG NPL +K VN + + D + SD IS D FDF
Sbjct: 139 LLPRGEKPNPLRQKNAKVNQLLKVSLPKLANV----QLLDTDGGFVHSDGAISCHDMFDF 194
Query: 65 LRLTESGSRKVFGPIHDII 83
L LT G K+ P+H++I
Sbjct: 195 LHLTGGGYAKICKPLHELI 213
>UNIPROTKB|P68402 [details] [associations]
symbol:PAFAH1B2 "Platelet-activating factor acetylhydrolase
IB subunit beta" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0003847
"1-alkyl-2-acetylglycerophosphocholine esterase activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA;TAS] [GO:0006629
"lipid metabolic process" evidence=TAS] [GO:0016239 "positive
regulation of macroautophagy" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR013831 PROSITE:PS01098 GO:GO:0005829 GO:GO:0005886
GO:GO:0005737 Pathway_Interaction_DB:lis1pathway GO:GO:0007420
GO:GO:0005730 EMBL:CH471065 GO:GO:0016042 GO:GO:0006629
GO:GO:0007283 Gene3D:3.40.50.1110 GO:GO:0016239 KO:K01062 PDB:1VYH
PDBsum:1VYH GO:GO:0003847 CTD:5049 eggNOG:NOG69837
HOGENOM:HOG000232143 HOVERGEN:HBG053477 OMA:LQQYEIW EMBL:D63390
EMBL:DQ836738 EMBL:DQ836739 EMBL:DQ836740 EMBL:DQ836741
EMBL:DQ836742 EMBL:DQ836743 EMBL:AK292973 EMBL:CR456736
EMBL:EF445007 EMBL:AP005018 EMBL:BC000398 EMBL:BC019301
IPI:IPI00026546 IPI:IPI00976543 IPI:IPI00980480 PIR:JC5409
RefSeq:NP_001171675.1 RefSeq:NP_001171676.1 RefSeq:NP_001171677.1
RefSeq:NP_002563.1 UniGene:Hs.597488 ProteinModelPortal:P68402
SMR:P68402 IntAct:P68402 MINT:MINT-5002700 STRING:P68402
PhosphoSite:P68402 DMDM:55977294 REPRODUCTION-2DPAGE:IPI00026546
PaxDb:P68402 PeptideAtlas:P68402 PRIDE:P68402
Ensembl:ENST00000419197 Ensembl:ENST00000527958
Ensembl:ENST00000529887 Ensembl:ENST00000530272 GeneID:5049
KEGG:hsa:5049 UCSC:uc001pqe.2 GeneCards:GC11P117048
H-InvDB:HIX0022939 HGNC:HGNC:8575 HPA:HPA051836 MIM:602508
neXtProt:NX_P68402 PharmGKB:PA32906 InParanoid:P68402
PhylomeDB:P68402 ChEMBL:CHEMBL4463 ChiTaRS:PAFAH1B2
EvolutionaryTrace:P68402 GenomeRNAi:5049 NextBio:19456
ArrayExpress:P68402 Bgee:P68402 CleanEx:HS_PAFAH1B2
Genevestigator:P68402 GermOnline:ENSG00000168092 Uniprot:P68402
Length = 229
Score = 102 (41.0 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 28/79 (35%), Positives = 36/79 (45%)
Query: 5 LLPRGRNRNPLWEKFFAVNXXXXXXXXXXXXXXXXXEFISHDISDLVSDDRISAGDFFDF 64
LLPRG NPL +K VN + + D + SD IS D FDF
Sbjct: 139 LLPRGEKPNPLRQKNAKVNQLLKVSLPKLANV----QLLDTDGGFVHSDGAISCHDMFDF 194
Query: 65 LRLTESGSRKVFGPIHDII 83
L LT G K+ P+H++I
Sbjct: 195 LHLTGGGYAKICKPLHELI 213
>UNIPROTKB|F2Z5V4 [details] [associations]
symbol:PAFAH1B2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016239 "positive regulation of macroautophagy"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR013831 GO:GO:0005737
GO:GO:0007283 GO:GO:0016787 Gene3D:3.40.50.1110 GO:GO:0016239
KO:K01062 GeneTree:ENSGT00390000016520 OMA:LQQYEIW EMBL:CU633260
RefSeq:XP_003129931.1 UniGene:Ssc.2783 ProteinModelPortal:F2Z5V4
SMR:F2Z5V4 PRIDE:F2Z5V4 Ensembl:ENSSSCT00000027329 GeneID:100523683
KEGG:ssc:100523683 Uniprot:F2Z5V4
Length = 229
Score = 102 (41.0 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 28/79 (35%), Positives = 36/79 (45%)
Query: 5 LLPRGRNRNPLWEKFFAVNXXXXXXXXXXXXXXXXXEFISHDISDLVSDDRISAGDFFDF 64
LLPRG NPL +K VN + + D + SD IS D FDF
Sbjct: 139 LLPRGEKPNPLRQKNAKVNQLLKVSLPKLANV----QLLDTDGGFVHSDGAISCHDMFDF 194
Query: 65 LRLTESGSRKVFGPIHDII 83
L LT G K+ P+H++I
Sbjct: 195 LHLTGGGYAKICKPLHELI 213
>MGI|MGI:108415 [details] [associations]
symbol:Pafah1b2 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 2" species:10090 "Mus musculus" [GO:0003847
"1-alkyl-2-acetylglycerophosphocholine esterase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=ISO] [GO:0006629 "lipid metabolic process"
evidence=IEA] [GO:0006928 "cellular component movement"
evidence=TAS] [GO:0007283 "spermatogenesis" evidence=IGI;IMP]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016239
"positive regulation of macroautophagy" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0047179
"platelet-activating factor acetyltransferase activity"
evidence=ISO] InterPro:IPR013831 PROSITE:PS01098 MGI:MGI:108415
GO:GO:0005829 GO:GO:0005737 GO:GO:0007420 GO:GO:0016042
GO:GO:0007283 GO:GO:0006928 Gene3D:3.40.50.1110 GO:GO:0016239
KO:K01062 GO:GO:0003847 CTD:5049 eggNOG:NOG69837
GeneTree:ENSGT00390000016520 HOGENOM:HOG000232143
HOVERGEN:HBG053477 OMA:LQQYEIW OrthoDB:EOG45QHF4 EMBL:U57747
EMBL:AK153424 EMBL:BC002037 EMBL:BC056211 IPI:IPI00118821
RefSeq:NP_032801.2 UniGene:Mm.200859 ProteinModelPortal:Q61206
SMR:Q61206 MINT:MINT-4106420 STRING:Q61206 PhosphoSite:Q61206
REPRODUCTION-2DPAGE:IPI00118821 REPRODUCTION-2DPAGE:Q61206
UCD-2DPAGE:Q61206 PaxDb:Q61206 PRIDE:Q61206
Ensembl:ENSMUST00000172450 GeneID:18475 KEGG:mmu:18475
UCSC:uc009pgx.1 InParanoid:Q61206 NextBio:294170 Bgee:Q61206
Genevestigator:Q61206 GermOnline:ENSMUSG00000003131 Uniprot:Q61206
Length = 229
Score = 101 (40.6 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 28/79 (35%), Positives = 36/79 (45%)
Query: 5 LLPRGRNRNPLWEKFFAVNXXXXXXXXXXXXXXXXXEFISHDISDLVSDDRISAGDFFDF 64
LLPRG NPL +K VN + + D + SD IS D FDF
Sbjct: 139 LLPRGEKPNPLRQKNAKVNQLLKVSLPKLANV----QLLDIDGGFVHSDGAISCHDMFDF 194
Query: 65 LRLTESGSRKVFGPIHDII 83
L LT G K+ P+H++I
Sbjct: 195 LHLTGGGYAKICKPLHELI 213
>RGD|620332 [details] [associations]
symbol:Pafah1b2 "platelet-activating factor acetylhydrolase 1b,
catalytic subunit 2" species:10116 "Rattus norvegicus" [GO:0003847
"1-alkyl-2-acetylglycerophosphocholine esterase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IEA;ISO] [GO:0007283 "spermatogenesis"
evidence=IEA;ISO] [GO:0007420 "brain development" evidence=IEP]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016239
"positive regulation of macroautophagy" evidence=IEA;ISO]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0047179 "platelet-activating factor acetyltransferase activity"
evidence=IDA;TAS] InterPro:IPR013831 PROSITE:PS01098 RGD:620332
GO:GO:0005829 GO:GO:0042803 GO:GO:0007420 GO:GO:0016042
GO:GO:0007283 Gene3D:3.40.50.1110 GO:GO:0016239 KO:K01062
GO:GO:0047179 GO:GO:0003847 CTD:5049 eggNOG:NOG69837
GeneTree:ENSGT00390000016520 HOGENOM:HOG000232143
HOVERGEN:HBG053477 OMA:LQQYEIW OrthoDB:EOG45QHF4 EMBL:AF016048
EMBL:BC081714 IPI:IPI00207335 RefSeq:NP_071782.1 UniGene:Rn.24751
ProteinModelPortal:O35264 SMR:O35264 IntAct:O35264 STRING:O35264
PhosphoSite:O35264 PRIDE:O35264 Ensembl:ENSRNOT00000024828
GeneID:64189 KEGG:rno:64189 UCSC:RGD:620332 InParanoid:O35264
NextBio:612844 Genevestigator:O35264 GermOnline:ENSRNOG00000018032
Uniprot:O35264
Length = 229
Score = 101 (40.6 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 28/79 (35%), Positives = 36/79 (45%)
Query: 5 LLPRGRNRNPLWEKFFAVNXXXXXXXXXXXXXXXXXEFISHDISDLVSDDRISAGDFFDF 64
LLPRG NPL +K VN + + D + SD IS D FDF
Sbjct: 139 LLPRGEKPNPLRQKNAKVNQLLKVSLPKLANV----QLLDIDGGFVHSDGAISCHDMFDF 194
Query: 65 LRLTESGSRKVFGPIHDII 83
L LT G K+ P+H++I
Sbjct: 195 LHLTGGGYAKICKPLHELI 213
>ZFIN|ZDB-GENE-060526-43 [details] [associations]
symbol:pafah1b2 "platelet-activating factor
acetylhydrolase 1b, catalytic subunit 2" species:7955 "Danio rerio"
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR013831
ZFIN:ZDB-GENE-060526-43 GO:GO:0016787 Gene3D:3.40.50.1110 KO:K01062
CTD:5049 eggNOG:NOG69837 GeneTree:ENSGT00390000016520
HOGENOM:HOG000232143 HOVERGEN:HBG053477 OMA:LQQYEIW
OrthoDB:EOG45QHF4 EMBL:BX465852 EMBL:BC160649 EMBL:BC163819
EMBL:BC163859 IPI:IPI00500058 RefSeq:NP_001076320.1
UniGene:Dr.133419 SMR:A2BGB4 STRING:A2BGB4
Ensembl:ENSDART00000051224 Ensembl:ENSDART00000127648 GeneID:567170
KEGG:dre:567170 InParanoid:A2BGB4 NextBio:20888554 Uniprot:A2BGB4
Length = 228
Score = 95 (38.5 bits), Expect = 0.00019, P = 0.00019
Identities = 27/79 (34%), Positives = 38/79 (48%)
Query: 5 LLPRGRNRNPLWEKFFAVNXXXXXXXXXXXXXXXXXEFISHDISDLVSDDRISAGDFFDF 64
LLPRG NPL EK +VN +F+ S + SD IS+ D FD+
Sbjct: 138 LLPRGEFPNPLREKNASVNNLLRASLPRLGPI----QFLDMGSSFVHSDGTISSRDMFDY 193
Query: 65 LRLTESGSRKVFGPIHDII 83
L LT S R + +H+++
Sbjct: 194 LHLTASAYRTISTTLHELL 212
>UNIPROTKB|F1N8K4 [details] [associations]
symbol:PAFAH1B2 "Platelet-activating factor acetylhydrolase
IB subunit beta" species:9031 "Gallus gallus" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0016239 "positive regulation of macroautophagy"
evidence=IEA] InterPro:IPR013831 GO:GO:0005737 GO:GO:0016787
Gene3D:3.40.50.1110 GO:GO:0016239 GeneTree:ENSGT00390000016520
OMA:LQQYEIW IPI:IPI00595348 EMBL:AADN02058074
Ensembl:ENSGALT00000011602 Uniprot:F1N8K4
Length = 229
Score = 95 (38.5 bits), Expect = 0.00019, P = 0.00019
Identities = 27/79 (34%), Positives = 35/79 (44%)
Query: 5 LLPRGRNRNPLWEKFFAVNXXXXXXXXXXXXXXXXXEFISHDISDLVSDDRISAGDFFDF 64
LLPRG NPL +K VN + + D + SD IS D FDF
Sbjct: 139 LLPRGEKPNPLRQKNAKVNHLLKASLPKLPNV----QLLDVDAGFVHSDGTISYHDMFDF 194
Query: 65 LRLTESGSRKVFGPIHDII 83
L LT K+ P+H++I
Sbjct: 195 LHLTGGAYAKICKPLHELI 213
>UNIPROTKB|Q5ZMS2 [details] [associations]
symbol:PAFAH1B2 "Platelet-activating factor acetylhydrolase
IB subunit beta" species:9031 "Gallus gallus" [GO:0003847
"1-alkyl-2-acetylglycerophosphocholine esterase activity"
evidence=IEA] [GO:0016042 "lipid catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR013831
PROSITE:PS01098 GO:GO:0005737 GO:GO:0016042 Gene3D:3.40.50.1110
GO:GO:0003847 eggNOG:NOG69837 HOGENOM:HOG000232143
HOVERGEN:HBG053477 OrthoDB:EOG45QHF4 EMBL:AJ719312 IPI:IPI00595348
UniGene:Gga.17363 HSSP:P68402 ProteinModelPortal:Q5ZMS2 SMR:Q5ZMS2
STRING:Q5ZMS2 InParanoid:Q5ZMS2 NextBio:20822772 Uniprot:Q5ZMS2
Length = 229
Score = 95 (38.5 bits), Expect = 0.00019, P = 0.00019
Identities = 27/79 (34%), Positives = 35/79 (44%)
Query: 5 LLPRGRNRNPLWEKFFAVNXXXXXXXXXXXXXXXXXEFISHDISDLVSDDRISAGDFFDF 64
LLPRG NPL +K VN + + D + SD IS D FDF
Sbjct: 139 LLPRGEKPNPLRQKNAKVNHLLKASLPKLPNV----QLLDVDAGFVHSDGTISYHDMFDF 194
Query: 65 LRLTESGSRKVFGPIHDII 83
L LT K+ P+H++I
Sbjct: 195 LHLTGGAYAKICKPLHELI 213
>ZFIN|ZDB-GENE-040426-1026 [details] [associations]
symbol:pafah1b3 "platelet-activating factor
acetylhydrolase, isoform Ib, gamma subunit" species:7955 "Danio
rerio" [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR013831 ZFIN:ZDB-GENE-040426-1026 GO:GO:0016787
Gene3D:3.40.50.1110 eggNOG:COG2755 KO:K01062
GeneTree:ENSGT00390000016520 HOGENOM:HOG000232143
HOVERGEN:HBG053477 OrthoDB:EOG45QHF4 OMA:FAPLHCL CTD:5050
EMBL:BX571826 EMBL:BC051609 EMBL:BX005342 IPI:IPI00501731
RefSeq:NP_957352.1 UniGene:Dr.78168 HSSP:Q29460 SMR:Q7ZTU4
STRING:Q7ZTU4 Ensembl:ENSDART00000060145 Ensembl:ENSDART00000141101
GeneID:394033 KEGG:dre:394033 InParanoid:Q7ZTU4 NextBio:20814995
Uniprot:Q7ZTU4
Length = 221
Score = 94 (38.1 bits), Expect = 0.00023, P = 0.00023
Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 5 LLPRGRNRNPLWEKFFAVNXXXXXXXXXXXXXXXXXEFISHDISDLVSDDRISAGDFFDF 64
LLPRG++ NPL E+ +VN F++ D + SD I+ D +D+
Sbjct: 138 LLPRGKSPNPLRERNASVNALVQAEVASLSHVS----FLNMDPGFVHSDGSIAHQDMYDY 193
Query: 65 LRLTESGSRKVFGPIHD 81
L LT ++V P+H+
Sbjct: 194 LHLTPHAYQRVCEPLHE 210
>FB|FBgn0025809 [details] [associations]
symbol:Paf-AHalpha "Platelet-activating factor
acetylhydrolase alpha" species:7227 "Drosophila melanogaster"
[GO:0003847 "1-alkyl-2-acetylglycerophosphocholine esterase
activity" evidence=ISS;IDA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR013831 PROSITE:PS01098 EMBL:AE014298 GO:GO:0016787
Gene3D:3.40.50.1110 KO:K01062 eggNOG:NOG69837
GeneTree:ENSGT00390000016520 EMBL:AF098069 EMBL:AY069389
RefSeq:NP_525089.2 RefSeq:NP_727895.1 UniGene:Dm.1672
ProteinModelPortal:Q9VXP4 SMR:Q9VXP4 IntAct:Q9VXP4 STRING:Q9VXP4
PaxDb:Q9VXP4 PRIDE:Q9VXP4 EnsemblMetazoa:FBtr0074190
EnsemblMetazoa:FBtr0074191 GeneID:32529 KEGG:dme:Dmel_CG8962
CTD:32529 FlyBase:FBgn0025809 InParanoid:Q9VXP4 OMA:FAPLHCL
OrthoDB:EOG4T1G3F PhylomeDB:Q9VXP4 ChiTaRS:Paf-AHalpha
GenomeRNAi:32529 NextBio:778936 Bgee:Q9VXP4 GermOnline:CG8962
Uniprot:Q9VXP4
Length = 225
Score = 90 (36.7 bits), Expect = 0.00066, P = 0.00066
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 5 LLPRGRNRNPLWEKFFAVNXXXXXXXXXXXXXXXXXEFISHDISDLVSDDRISAGDFFDF 64
LLPRG+ N L EK +N + ++ D + +D IS D FD+
Sbjct: 134 LLPRGQQPNKLREKNAKINEVVNGLTKGLYRV----QTVAIDKGLVQTDGSISHHDMFDY 189
Query: 65 LRLTESGSRKVFGPIHDII 83
LT +G++K+ P++D++
Sbjct: 190 KNLTNAGAKKILEPLYDLL 208
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.143 0.433 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 135 68 0.00091 102 3 11 22 0.42 28
29 0.38 29
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 476 (51 KB)
Total size of DFA: 88 KB (2067 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 6.95u 0.10s 7.05t Elapsed: 00:00:14
Total cpu time: 6.95u 0.10s 7.05t Elapsed: 00:00:14
Start: Thu Aug 15 14:00:48 2013 End: Thu Aug 15 14:01:02 2013