Query psy9949
Match_columns 383
No_of_seqs 148 out of 1572
Neff 9.6
Searched_HMMs 46136
Date Fri Aug 16 23:46:37 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9949.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/9949hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 6.2E-56 1.3E-60 399.6 25.1 311 24-383 1-337 (339)
2 COG0604 Qor NADPH:quinone redu 100.0 1.9E-50 4.2E-55 373.1 30.1 321 27-383 1-326 (326)
3 KOG0023|consensus 100.0 1.6E-47 3.5E-52 333.5 24.9 315 20-383 3-354 (360)
4 KOG1197|consensus 100.0 7.4E-47 1.6E-51 318.0 27.0 319 22-382 4-329 (336)
5 KOG0024|consensus 100.0 3.3E-47 7.1E-52 332.5 22.9 311 25-382 3-351 (354)
6 COG1062 AdhC Zn-dependent alco 100.0 7.6E-47 1.6E-51 333.1 18.6 314 25-383 1-366 (366)
7 cd08281 liver_ADH_like1 Zinc-d 100.0 1.1E-43 2.3E-48 337.4 28.7 313 27-381 1-371 (371)
8 KOG0022|consensus 100.0 5.8E-45 1.3E-49 315.9 17.8 317 22-383 3-375 (375)
9 PLN02586 probable cinnamyl alc 100.0 2.5E-43 5.5E-48 333.0 29.2 315 18-383 4-353 (360)
10 TIGR03451 mycoS_dep_FDH mycoth 100.0 1E-42 2.3E-47 329.2 26.2 313 26-382 1-357 (358)
11 PLN02740 Alcohol dehydrogenase 100.0 2.2E-42 4.7E-47 329.4 28.5 319 20-383 4-381 (381)
12 PRK09880 L-idonate 5-dehydroge 100.0 4.6E-42 9.9E-47 322.9 28.4 306 26-383 4-343 (343)
13 TIGR02818 adh_III_F_hyde S-(hy 100.0 5.7E-42 1.2E-46 325.0 28.9 313 27-383 2-368 (368)
14 cd08239 THR_DH_like L-threonin 100.0 8.3E-42 1.8E-46 320.9 29.6 307 27-383 1-339 (339)
15 PLN02178 cinnamyl-alcohol dehy 100.0 1.1E-41 2.4E-46 322.8 29.3 308 27-383 5-348 (375)
16 cd08291 ETR_like_1 2-enoyl thi 100.0 5.1E-42 1.1E-46 320.4 26.2 315 27-382 1-324 (324)
17 TIGR02822 adh_fam_2 zinc-bindi 100.0 1.9E-41 4.2E-46 316.4 28.0 300 29-381 1-328 (329)
18 cd08300 alcohol_DH_class_III c 100.0 2.3E-41 4.9E-46 321.1 27.4 313 26-382 2-368 (368)
19 PLN02827 Alcohol dehydrogenase 100.0 6.5E-41 1.4E-45 318.5 29.7 311 26-383 12-376 (378)
20 PLN02514 cinnamyl-alcohol dehy 100.0 7.8E-41 1.7E-45 315.9 29.8 308 25-383 8-350 (357)
21 cd08301 alcohol_DH_plants Plan 100.0 5.9E-41 1.3E-45 318.6 27.1 312 26-381 2-368 (369)
22 KOG1198|consensus 100.0 8.6E-40 1.9E-44 302.1 31.6 327 26-383 4-345 (347)
23 cd08230 glucose_DH Glucose deh 100.0 3.7E-40 8E-45 311.5 25.6 312 27-383 1-355 (355)
24 PLN03154 putative allyl alcoho 100.0 9.8E-40 2.1E-44 307.1 27.9 320 25-383 7-345 (348)
25 TIGR02819 fdhA_non_GSH formald 100.0 9.8E-40 2.1E-44 311.0 28.0 320 26-383 2-390 (393)
26 KOG0025|consensus 100.0 9.5E-40 2.1E-44 280.0 24.2 324 19-382 12-351 (354)
27 PRK10309 galactitol-1-phosphat 100.0 1.3E-39 2.9E-44 306.8 27.7 312 27-383 1-346 (347)
28 cd08277 liver_alcohol_DH_like 100.0 4.3E-39 9.3E-44 305.2 30.6 311 26-382 2-365 (365)
29 TIGR01202 bchC 2-desacetyl-2-h 100.0 9.5E-40 2.1E-44 302.4 25.5 297 26-382 1-308 (308)
30 cd08248 RTN4I1 Human Reticulon 100.0 1.5E-38 3.2E-43 300.2 33.1 344 27-382 1-350 (350)
31 cd08237 ribitol-5-phosphate_DH 100.0 1.7E-39 3.8E-44 304.8 26.6 301 26-383 2-339 (341)
32 TIGR03201 dearomat_had 6-hydro 100.0 3.1E-39 6.8E-44 304.4 27.9 305 30-383 2-349 (349)
33 cd08294 leukotriene_B4_DH_like 100.0 4.8E-39 1E-43 300.9 28.6 312 26-383 2-329 (329)
34 cd08296 CAD_like Cinnamyl alco 100.0 8.6E-39 1.9E-43 299.7 29.7 307 27-382 1-333 (333)
35 cd08293 PTGR2 Prostaglandin re 100.0 3.5E-39 7.6E-44 303.9 27.2 313 38-383 20-345 (345)
36 cd08295 double_bond_reductase_ 100.0 3.6E-39 7.9E-44 302.8 27.1 318 26-383 7-338 (338)
37 TIGR02825 B4_12hDH leukotriene 100.0 4.6E-39 1E-43 300.5 25.6 303 36-382 14-325 (325)
38 cd08238 sorbose_phosphate_red 100.0 5.9E-39 1.3E-43 308.4 26.6 320 25-383 1-368 (410)
39 cd08292 ETR_like_2 2-enoyl thi 100.0 2E-38 4.4E-43 296.0 28.0 310 27-382 1-324 (324)
40 cd08233 butanediol_DH_like (2R 100.0 1.8E-38 3.9E-43 299.7 27.6 316 27-381 1-350 (351)
41 TIGR02817 adh_fam_1 zinc-bindi 100.0 5.4E-38 1.2E-42 294.7 28.3 312 28-382 1-334 (336)
42 cd08274 MDR9 Medium chain dehy 100.0 2E-37 4.3E-42 292.5 29.0 328 27-382 1-349 (350)
43 cd08231 MDR_TM0436_like Hypoth 100.0 1.5E-37 3.3E-42 294.5 26.8 310 28-383 2-361 (361)
44 cd08285 NADP_ADH NADP(H)-depen 100.0 3E-37 6.4E-42 291.4 27.5 313 27-383 1-351 (351)
45 cd08290 ETR 2-enoyl thioester 100.0 2.9E-37 6.4E-42 290.3 27.3 317 27-383 1-341 (341)
46 cd08246 crotonyl_coA_red croto 100.0 7.3E-37 1.6E-41 293.0 29.5 326 23-382 9-392 (393)
47 COG1063 Tdh Threonine dehydrog 100.0 3.5E-37 7.5E-42 288.6 26.0 310 27-383 1-350 (350)
48 TIGR01751 crot-CoA-red crotony 100.0 1.2E-36 2.5E-41 291.8 28.7 328 22-383 3-387 (398)
49 PRK10754 quinone oxidoreductas 100.0 2E-36 4.4E-41 283.0 28.3 317 26-382 1-326 (327)
50 cd08278 benzyl_alcohol_DH Benz 100.0 1.7E-36 3.7E-41 287.4 27.8 312 25-382 1-365 (365)
51 cd08244 MDR_enoyl_red Possible 100.0 2.8E-36 6E-41 281.5 27.3 320 27-383 1-324 (324)
52 PTZ00354 alcohol dehydrogenase 100.0 1.1E-35 2.4E-40 278.6 31.3 319 26-383 1-328 (334)
53 cd05283 CAD1 Cinnamyl alcohol 100.0 1E-35 2.2E-40 279.3 29.5 303 28-382 1-337 (337)
54 PRK13771 putative alcohol dehy 100.0 2.9E-36 6.3E-41 282.8 25.6 307 27-382 1-332 (334)
55 PRK10083 putative oxidoreducta 100.0 7.4E-36 1.6E-40 280.6 28.4 306 27-383 1-337 (339)
56 cd05284 arabinose_DH_like D-ar 100.0 8.7E-36 1.9E-40 280.2 28.7 309 27-382 1-339 (340)
57 cd08259 Zn_ADH5 Alcohol dehydr 100.0 1.3E-35 2.9E-40 277.8 29.9 307 27-382 1-332 (332)
58 cd08263 Zn_ADH10 Alcohol dehyd 100.0 3.8E-36 8.3E-41 285.5 26.2 309 27-382 1-367 (367)
59 COG2130 Putative NADP-dependen 100.0 2.2E-36 4.7E-41 262.1 22.2 304 38-383 24-338 (340)
60 PRK09422 ethanol-active dehydr 100.0 7.6E-36 1.6E-40 280.4 27.8 306 27-382 1-335 (338)
61 cd08299 alcohol_DH_class_I_II_ 100.0 9.2E-36 2E-40 282.9 27.9 312 26-383 7-373 (373)
62 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 1.3E-35 2.8E-40 277.2 28.2 317 27-383 1-325 (325)
63 cd08249 enoyl_reductase_like e 100.0 3.7E-36 8.1E-41 282.5 24.6 320 27-383 1-339 (339)
64 cd08297 CAD3 Cinnamyl alcohol 100.0 2.4E-35 5.1E-40 277.4 29.5 312 27-383 1-341 (341)
65 cd08270 MDR4 Medium chain dehy 100.0 1.1E-35 2.3E-40 275.3 26.4 301 27-383 1-305 (305)
66 cd08240 6_hydroxyhexanoate_dh_ 100.0 2E-35 4.4E-40 278.8 28.3 321 27-382 1-349 (350)
67 cd08243 quinone_oxidoreductase 100.0 3.3E-35 7.1E-40 273.6 28.8 314 27-381 1-319 (320)
68 cd08260 Zn_ADH6 Alcohol dehydr 100.0 2.3E-35 5E-40 277.9 27.6 312 27-382 1-344 (345)
69 cd08289 MDR_yhfp_like Yhfp put 100.0 1.8E-35 3.8E-40 276.4 26.4 320 27-383 1-326 (326)
70 TIGR02823 oxido_YhdH putative 100.0 3.9E-35 8.5E-40 273.8 27.9 316 28-383 1-323 (323)
71 cd08250 Mgc45594_like Mgc45594 100.0 2.5E-35 5.5E-40 275.8 26.1 318 26-382 1-329 (329)
72 cd08256 Zn_ADH2 Alcohol dehydr 100.0 6.1E-35 1.3E-39 275.5 27.1 314 27-381 1-350 (350)
73 cd05282 ETR_like 2-enoyl thioe 100.0 6.2E-35 1.3E-39 272.3 26.7 310 33-382 4-323 (323)
74 cd05278 FDH_like Formaldehyde 100.0 1.1E-34 2.3E-39 273.6 27.3 307 27-382 1-346 (347)
75 cd08286 FDH_like_ADH2 formalde 100.0 1.3E-34 2.8E-39 272.8 27.8 308 27-383 1-345 (345)
76 cd08252 AL_MDR Arginate lyase 100.0 2.2E-34 4.8E-39 270.1 29.3 315 27-382 1-336 (336)
77 cd08262 Zn_ADH8 Alcohol dehydr 100.0 1.2E-34 2.7E-39 272.5 27.2 315 27-382 1-341 (341)
78 cd08261 Zn_ADH7 Alcohol dehydr 100.0 1.9E-34 4E-39 270.8 28.3 306 27-383 1-337 (337)
79 cd08283 FDH_like_1 Glutathione 100.0 1.9E-34 4.1E-39 275.3 28.8 308 27-382 1-385 (386)
80 cd08282 PFDH_like Pseudomonas 100.0 2.2E-34 4.9E-39 273.9 28.6 316 27-382 1-374 (375)
81 cd08279 Zn_ADH_class_III Class 100.0 1.6E-34 3.5E-39 273.9 27.3 309 27-380 1-362 (363)
82 cd08276 MDR7 Medium chain dehy 100.0 7.2E-34 1.6E-38 266.5 31.2 313 27-383 1-336 (336)
83 cd08273 MDR8 Medium chain dehy 100.0 1E-33 2.3E-38 265.0 31.9 326 27-381 1-330 (331)
84 cd08235 iditol_2_DH_like L-idi 100.0 5.2E-34 1.1E-38 268.4 29.3 307 27-382 1-343 (343)
85 cd08288 MDR_yhdh Yhdh putative 100.0 4.4E-34 9.6E-39 266.8 28.2 315 27-383 1-324 (324)
86 cd08271 MDR5 Medium chain dehy 100.0 6.7E-34 1.4E-38 265.4 29.4 319 27-383 1-325 (325)
87 cd08298 CAD2 Cinnamyl alcohol 100.0 8.5E-34 1.9E-38 265.5 29.4 301 27-381 1-329 (329)
88 cd08247 AST1_like AST1 is a cy 100.0 2.5E-33 5.4E-38 264.7 32.1 331 27-383 1-352 (352)
89 cd08272 MDR6 Medium chain dehy 100.0 1.9E-33 4.2E-38 262.2 30.8 315 27-383 1-326 (326)
90 cd08264 Zn_ADH_like2 Alcohol d 100.0 7.9E-34 1.7E-38 265.2 28.1 300 27-380 1-325 (325)
91 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 8.4E-34 1.8E-38 266.4 28.4 311 27-383 1-338 (338)
92 cd05279 Zn_ADH1 Liver alcohol 100.0 7.1E-34 1.5E-38 269.5 27.5 310 28-381 2-364 (365)
93 PRK05396 tdh L-threonine 3-deh 100.0 7.5E-34 1.6E-38 267.2 27.2 310 27-383 1-340 (341)
94 cd08266 Zn_ADH_like1 Alcohol d 100.0 2.7E-33 5.9E-38 262.9 30.1 314 27-383 1-342 (342)
95 cd05289 MDR_like_2 alcohol deh 100.0 3.2E-33 7E-38 258.6 30.1 309 27-381 1-309 (309)
96 cd08284 FDH_like_2 Glutathione 100.0 1.4E-33 3E-38 265.7 27.7 305 27-382 1-343 (344)
97 cd08242 MDR_like Medium chain 100.0 1E-33 2.2E-38 263.8 26.3 290 27-382 1-318 (319)
98 cd08253 zeta_crystallin Zeta-c 100.0 1.2E-33 2.6E-38 263.2 26.3 317 27-383 1-325 (325)
99 cd08236 sugar_DH NAD(P)-depend 100.0 1.4E-33 3E-38 265.6 26.5 311 27-381 1-343 (343)
100 cd05276 p53_inducible_oxidored 100.0 3.4E-33 7.3E-38 259.8 28.8 315 27-381 1-323 (323)
101 cd05286 QOR2 Quinone oxidoredu 100.0 3.9E-33 8.5E-38 259.0 27.8 313 28-382 1-319 (320)
102 cd08267 MDR1 Medium chain dehy 100.0 6.9E-33 1.5E-37 257.8 28.5 315 32-381 3-319 (319)
103 cd08287 FDH_like_ADH3 formalde 100.0 4.2E-33 9.2E-38 262.5 27.0 305 27-382 1-344 (345)
104 cd08234 threonine_DH_like L-th 100.0 1.1E-32 2.5E-37 258.4 29.3 304 27-381 1-333 (334)
105 cd05288 PGDH Prostaglandin deh 100.0 5.8E-33 1.3E-37 259.8 27.2 316 27-381 2-329 (329)
106 cd05281 TDH Threonine dehydrog 100.0 8.7E-33 1.9E-37 259.9 27.2 309 27-382 1-340 (341)
107 PLN02702 L-idonate 5-dehydroge 100.0 3E-32 6.5E-37 258.5 30.4 308 26-382 18-363 (364)
108 cd05285 sorbitol_DH Sorbitol d 100.0 2.1E-32 4.6E-37 257.5 28.1 304 30-382 2-342 (343)
109 cd08245 CAD Cinnamyl alcohol d 100.0 2.9E-32 6.2E-37 255.2 28.3 304 28-381 1-330 (330)
110 cd08232 idonate-5-DH L-idonate 100.0 2.7E-32 5.9E-37 256.4 27.3 299 39-383 7-339 (339)
111 TIGR02824 quinone_pig3 putativ 100.0 6E-32 1.3E-36 251.9 29.4 317 27-383 1-325 (325)
112 cd08265 Zn_ADH3 Alcohol dehydr 100.0 4.1E-32 8.9E-37 259.1 28.5 311 27-381 29-383 (384)
113 cd08275 MDR3 Medium chain dehy 100.0 4.3E-32 9.3E-37 254.4 27.7 325 28-383 1-337 (337)
114 cd08269 Zn_ADH9 Alcohol dehydr 100.0 3.5E-32 7.6E-37 252.5 26.8 298 39-381 5-311 (312)
115 cd08268 MDR2 Medium chain dehy 100.0 9E-32 2E-36 251.0 28.5 320 27-383 1-328 (328)
116 TIGR00692 tdh L-threonine 3-de 100.0 4.4E-32 9.5E-37 255.0 25.7 305 33-383 5-340 (340)
117 cd08251 polyketide_synthase po 100.0 6.4E-32 1.4E-36 249.3 25.0 298 49-381 2-303 (303)
118 cd08241 QOR1 Quinone oxidoredu 100.0 1.2E-30 2.5E-35 242.8 29.1 313 27-382 1-323 (323)
119 cd08258 Zn_ADH4 Alcohol dehydr 100.0 9.9E-31 2.1E-35 242.1 26.7 275 27-348 1-306 (306)
120 cd05195 enoyl_red enoyl reduct 100.0 3.1E-30 6.7E-35 236.2 23.8 287 55-381 1-293 (293)
121 smart00829 PKS_ER Enoylreducta 100.0 3.4E-29 7.4E-34 229.0 25.5 279 59-381 2-288 (288)
122 TIGR03366 HpnZ_proposed putati 100.0 1.2E-29 2.6E-34 231.8 20.8 233 102-363 1-280 (280)
123 KOG1202|consensus 100.0 6.2E-30 1.3E-34 251.8 13.3 303 36-383 1424-1741(2376)
124 KOG1196|consensus 100.0 6.7E-27 1.5E-31 202.4 23.3 298 50-383 33-340 (343)
125 cd05188 MDR Medium chain reduc 100.0 5.5E-27 1.2E-31 212.8 23.5 209 56-288 1-233 (271)
126 cd08255 2-desacetyl-2-hydroxye 99.9 4.7E-26 1E-30 207.9 18.7 250 97-381 18-277 (277)
127 PF08240 ADH_N: Alcohol dehydr 99.7 1E-17 2.2E-22 130.4 9.4 85 54-153 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.4 5.5E-13 1.2E-17 107.2 5.6 126 200-347 1-130 (130)
129 PF13602 ADH_zinc_N_2: Zinc-bi 99.4 2E-12 4.3E-17 103.5 8.8 121 231-381 1-127 (127)
130 cd00401 AdoHcyase S-adenosyl-L 99.0 5.4E-09 1.2E-13 98.9 11.7 173 172-381 188-374 (413)
131 PRK09424 pntA NAD(P) transhydr 99.0 1.8E-08 3.9E-13 97.8 15.1 98 187-288 163-286 (509)
132 TIGR00561 pntA NAD(P) transhyd 97.9 4.5E-05 9.7E-10 74.2 9.6 99 187-288 162-285 (511)
133 PRK05476 S-adenosyl-L-homocyst 97.9 9.2E-05 2E-09 70.7 11.0 104 171-289 197-301 (425)
134 PF11017 DUF2855: Protein of u 97.9 0.00054 1.2E-08 62.3 14.4 151 108-269 38-215 (314)
135 PRK08306 dipicolinate synthase 97.6 0.00063 1.4E-08 62.4 11.4 91 188-288 151-242 (296)
136 TIGR00936 ahcY adenosylhomocys 97.6 0.0004 8.6E-09 66.0 10.1 91 187-289 193-284 (406)
137 PRK11873 arsM arsenite S-adeno 97.6 0.00038 8.2E-09 63.2 9.0 95 187-287 76-183 (272)
138 COG4221 Short-chain alcohol de 97.6 0.00058 1.3E-08 59.3 9.4 78 187-264 4-92 (246)
139 PLN02494 adenosylhomocysteinas 97.5 0.00069 1.5E-08 65.1 9.9 90 187-288 252-342 (477)
140 PRK12771 putative glutamate sy 97.5 0.00061 1.3E-08 68.6 9.7 77 187-266 135-235 (564)
141 PTZ00075 Adenosylhomocysteinas 97.3 0.0043 9.3E-08 59.9 13.1 90 187-288 252-342 (476)
142 PF01488 Shikimate_DH: Shikima 97.3 0.0018 3.9E-08 52.1 8.9 90 188-287 11-109 (135)
143 COG0300 DltE Short-chain dehyd 97.1 0.0019 4E-08 57.7 7.9 78 187-264 4-95 (265)
144 cd05213 NAD_bind_Glutamyl_tRNA 97.1 0.0011 2.4E-08 61.4 6.7 110 148-266 139-251 (311)
145 TIGR01035 hemA glutamyl-tRNA r 97.1 0.00018 3.9E-09 69.3 1.4 144 102-266 89-253 (417)
146 PRK08324 short chain dehydroge 97.1 0.0022 4.7E-08 66.1 8.9 112 137-263 385-508 (681)
147 COG3967 DltE Short-chain dehyd 97.1 0.0034 7.3E-08 53.0 8.2 77 188-264 4-89 (245)
148 TIGR00518 alaDH alanine dehydr 97.0 0.0071 1.5E-07 57.4 10.7 95 188-288 166-268 (370)
149 PRK05993 short chain dehydroge 97.0 0.0049 1.1E-07 56.0 9.3 76 188-263 3-86 (277)
150 PRK12742 oxidoreductase; Provi 97.0 0.0064 1.4E-07 53.7 9.8 77 188-264 5-86 (237)
151 PRK06182 short chain dehydroge 96.9 0.0077 1.7E-07 54.6 9.8 77 188-264 2-85 (273)
152 PRK12367 short chain dehydroge 96.9 0.0072 1.6E-07 53.9 9.3 73 188-263 13-89 (245)
153 KOG1205|consensus 96.8 0.0063 1.4E-07 54.8 8.6 77 188-264 11-102 (282)
154 PRK05693 short chain dehydroge 96.8 0.0064 1.4E-07 55.1 8.6 74 190-263 2-82 (274)
155 PRK06139 short chain dehydroge 96.8 0.0095 2.1E-07 55.7 9.7 76 188-263 6-94 (330)
156 COG2518 Pcm Protein-L-isoaspar 96.8 0.0045 9.7E-08 52.9 6.7 98 179-287 67-169 (209)
157 PRK06057 short chain dehydroge 96.7 0.013 2.7E-07 52.6 9.9 76 188-263 6-89 (255)
158 PRK05786 fabG 3-ketoacyl-(acyl 96.7 0.012 2.6E-07 52.0 9.4 76 188-263 4-91 (238)
159 PRK07060 short chain dehydroge 96.7 0.013 2.8E-07 52.0 9.6 76 188-263 8-87 (245)
160 TIGR02853 spore_dpaA dipicolin 96.7 0.021 4.5E-07 52.2 10.9 90 188-287 150-240 (287)
161 PRK00517 prmA ribosomal protei 96.6 0.008 1.7E-07 53.8 8.0 139 119-286 65-212 (250)
162 PRK05872 short chain dehydroge 96.6 0.012 2.5E-07 54.2 9.3 76 188-263 8-95 (296)
163 PRK00045 hemA glutamyl-tRNA re 96.6 0.0065 1.4E-07 58.8 7.4 150 101-267 90-256 (423)
164 PF13460 NAD_binding_10: NADH( 96.6 0.013 2.7E-07 49.6 8.4 93 192-288 1-98 (183)
165 PRK05866 short chain dehydroge 96.6 0.019 4.1E-07 52.7 10.0 77 188-264 39-128 (293)
166 PLN03209 translocon at the inn 96.4 0.014 2.9E-07 57.9 8.6 76 187-264 78-170 (576)
167 PRK07825 short chain dehydroge 96.4 0.02 4.4E-07 51.8 9.2 76 188-263 4-88 (273)
168 PRK12828 short chain dehydroge 96.4 0.024 5.1E-07 49.9 9.5 76 188-263 6-92 (239)
169 PRK12829 short chain dehydroge 96.4 0.029 6.2E-07 50.4 9.9 78 187-264 9-97 (264)
170 PRK07831 short chain dehydroge 96.4 0.025 5.5E-07 50.8 9.5 77 187-263 15-107 (262)
171 KOG1199|consensus 96.3 0.017 3.6E-07 47.3 7.0 80 187-266 7-96 (260)
172 PRK07904 short chain dehydroge 96.3 0.029 6.2E-07 50.3 9.5 78 187-264 6-98 (253)
173 PRK06179 short chain dehydroge 96.3 0.019 4.2E-07 51.8 8.5 76 188-264 3-84 (270)
174 PF00670 AdoHcyase_NAD: S-aden 96.3 0.081 1.8E-06 43.5 11.0 102 172-288 9-111 (162)
175 cd01078 NAD_bind_H4MPT_DH NADP 96.3 0.052 1.1E-06 46.5 10.6 75 188-265 27-109 (194)
176 PRK08017 oxidoreductase; Provi 96.3 0.025 5.5E-07 50.5 9.1 74 190-263 3-84 (256)
177 PRK06196 oxidoreductase; Provi 96.3 0.024 5.3E-07 52.6 9.1 76 188-263 25-109 (315)
178 cd01080 NAD_bind_m-THF_DH_Cycl 96.3 0.099 2.1E-06 43.6 11.6 77 187-290 42-119 (168)
179 PRK06200 2,3-dihydroxy-2,3-dih 96.2 0.028 6.1E-07 50.5 9.2 76 188-263 5-90 (263)
180 PRK07109 short chain dehydroge 96.2 0.033 7.3E-07 52.1 9.7 76 188-263 7-95 (334)
181 KOG1200|consensus 96.2 0.036 7.8E-07 46.5 8.6 77 188-264 13-101 (256)
182 PRK06483 dihydromonapterin red 96.2 0.032 6.8E-07 49.3 9.1 75 189-263 2-84 (236)
183 PRK06500 short chain dehydroge 96.2 0.036 7.8E-07 49.2 9.5 76 188-263 5-90 (249)
184 PRK12481 2-deoxy-D-gluconate 3 96.2 0.025 5.4E-07 50.5 8.5 76 188-263 7-93 (251)
185 PRK06180 short chain dehydroge 96.2 0.028 6.1E-07 51.0 8.8 77 188-264 3-89 (277)
186 TIGR03325 BphB_TodD cis-2,3-di 96.2 0.032 6.9E-07 50.2 9.1 76 188-263 4-89 (262)
187 PRK08217 fabG 3-ketoacyl-(acyl 96.1 0.041 8.8E-07 48.9 9.6 76 188-263 4-92 (253)
188 KOG1201|consensus 96.1 0.034 7.4E-07 50.0 8.7 78 187-264 36-125 (300)
189 PRK08177 short chain dehydroge 96.1 0.035 7.5E-07 48.7 8.9 74 190-263 2-81 (225)
190 PF02826 2-Hacid_dh_C: D-isome 96.1 0.038 8.2E-07 46.7 8.7 87 188-286 35-126 (178)
191 PRK08265 short chain dehydroge 96.1 0.04 8.8E-07 49.5 9.5 76 188-263 5-90 (261)
192 PRK07576 short chain dehydroge 96.1 0.026 5.6E-07 50.9 8.2 76 188-263 8-96 (264)
193 PRK08339 short chain dehydroge 96.1 0.041 8.8E-07 49.6 9.5 76 188-263 7-95 (263)
194 PRK06505 enoyl-(acyl carrier p 96.1 0.036 7.7E-07 50.3 9.1 76 188-263 6-95 (271)
195 PRK07814 short chain dehydroge 96.1 0.03 6.6E-07 50.4 8.6 76 188-263 9-97 (263)
196 PRK07856 short chain dehydroge 96.0 0.027 5.7E-07 50.3 7.9 75 188-263 5-85 (252)
197 TIGR01832 kduD 2-deoxy-D-gluco 96.0 0.035 7.7E-07 49.3 8.5 76 188-263 4-90 (248)
198 PRK08267 short chain dehydroge 96.0 0.05 1.1E-06 48.8 9.6 75 190-264 2-88 (260)
199 PRK05854 short chain dehydroge 96.0 0.038 8.1E-07 51.3 8.9 76 188-263 13-103 (313)
200 PRK06523 short chain dehydroge 96.0 0.017 3.7E-07 51.8 6.5 74 188-263 8-87 (260)
201 PRK07453 protochlorophyllide o 96.0 0.036 7.8E-07 51.6 8.8 76 188-263 5-93 (322)
202 PRK06463 fabG 3-ketoacyl-(acyl 96.0 0.046 9.9E-07 48.9 9.2 76 188-263 6-89 (255)
203 PRK07533 enoyl-(acyl carrier p 96.0 0.047 1E-06 49.0 9.3 76 188-263 9-98 (258)
204 PRK06841 short chain dehydroge 96.0 0.051 1.1E-06 48.5 9.4 76 188-263 14-99 (255)
205 PRK07478 short chain dehydroge 96.0 0.059 1.3E-06 48.1 9.8 76 188-263 5-93 (254)
206 PRK07063 short chain dehydroge 96.0 0.037 8.1E-07 49.6 8.5 76 188-263 6-96 (260)
207 PRK08261 fabG 3-ketoacyl-(acyl 95.9 0.051 1.1E-06 53.2 9.9 76 188-263 209-294 (450)
208 PRK05717 oxidoreductase; Valid 95.9 0.054 1.2E-06 48.4 9.4 78 187-264 8-95 (255)
209 PRK06935 2-deoxy-D-gluconate 3 95.9 0.037 8E-07 49.6 8.3 76 188-263 14-101 (258)
210 PRK12939 short chain dehydroge 95.9 0.076 1.6E-06 47.1 10.3 77 187-263 5-94 (250)
211 PRK13394 3-hydroxybutyrate deh 95.9 0.059 1.3E-06 48.2 9.6 76 188-263 6-94 (262)
212 PRK08589 short chain dehydroge 95.9 0.061 1.3E-06 48.7 9.7 76 188-263 5-92 (272)
213 PRK05867 short chain dehydroge 95.9 0.056 1.2E-06 48.3 9.4 76 188-263 8-96 (253)
214 PRK06079 enoyl-(acyl carrier p 95.9 0.045 9.9E-07 48.9 8.7 76 188-263 6-93 (252)
215 PRK08415 enoyl-(acyl carrier p 95.9 0.06 1.3E-06 48.9 9.5 76 188-263 4-93 (274)
216 PRK08264 short chain dehydroge 95.9 0.05 1.1E-06 48.0 8.9 74 188-263 5-83 (238)
217 PRK06194 hypothetical protein; 95.9 0.045 9.8E-07 49.9 8.7 77 188-264 5-94 (287)
218 PRK08993 2-deoxy-D-gluconate 3 95.8 0.041 8.9E-07 49.2 8.2 76 188-263 9-95 (253)
219 PRK06398 aldose dehydrogenase; 95.8 0.037 7.9E-07 49.7 7.9 72 188-263 5-82 (258)
220 PRK09291 short chain dehydroge 95.8 0.059 1.3E-06 48.1 9.2 74 189-263 2-83 (257)
221 PRK09072 short chain dehydroge 95.8 0.052 1.1E-06 48.8 8.8 77 188-264 4-91 (263)
222 PRK07890 short chain dehydroge 95.8 0.042 9.1E-07 49.1 8.1 77 187-263 3-92 (258)
223 PRK06949 short chain dehydroge 95.8 0.047 1E-06 48.8 8.4 77 187-263 7-96 (258)
224 PRK07062 short chain dehydroge 95.8 0.052 1.1E-06 48.8 8.7 76 188-263 7-97 (265)
225 PRK05876 short chain dehydroge 95.8 0.063 1.4E-06 48.7 9.2 76 188-263 5-93 (275)
226 PRK07806 short chain dehydroge 95.8 0.087 1.9E-06 46.8 10.0 76 188-263 5-94 (248)
227 PLN02253 xanthoxin dehydrogena 95.8 0.067 1.5E-06 48.5 9.4 76 188-263 17-104 (280)
228 PRK06720 hypothetical protein; 95.7 0.12 2.6E-06 43.2 10.0 77 188-264 15-104 (169)
229 PRK07523 gluconate 5-dehydroge 95.7 0.058 1.3E-06 48.2 8.7 77 188-264 9-98 (255)
230 PRK07889 enoyl-(acyl carrier p 95.7 0.054 1.2E-06 48.6 8.4 77 188-264 6-96 (256)
231 PRK12823 benD 1,6-dihydroxycyc 95.7 0.078 1.7E-06 47.5 9.5 76 188-263 7-94 (260)
232 PRK07424 bifunctional sterol d 95.7 0.067 1.4E-06 51.3 9.2 75 188-264 177-256 (406)
233 PRK06484 short chain dehydroge 95.7 0.064 1.4E-06 53.5 9.5 77 187-263 3-89 (520)
234 PRK08628 short chain dehydroge 95.7 0.054 1.2E-06 48.4 8.2 76 188-263 6-93 (258)
235 PRK07454 short chain dehydroge 95.6 0.1 2.2E-06 46.2 9.8 77 187-263 4-93 (241)
236 PRK07832 short chain dehydroge 95.6 0.086 1.9E-06 47.7 9.6 74 191-264 2-89 (272)
237 PRK07677 short chain dehydroge 95.6 0.089 1.9E-06 46.9 9.5 75 189-263 1-88 (252)
238 PRK05653 fabG 3-ketoacyl-(acyl 95.6 0.097 2.1E-06 46.2 9.7 77 188-264 4-93 (246)
239 PRK07577 short chain dehydroge 95.6 0.022 4.7E-07 50.2 5.3 72 188-263 2-78 (234)
240 PRK06114 short chain dehydroge 95.6 0.095 2.1E-06 46.8 9.6 76 188-263 7-96 (254)
241 PLN02657 3,8-divinyl protochlo 95.6 0.097 2.1E-06 50.2 10.0 78 187-264 58-147 (390)
242 PRK05884 short chain dehydroge 95.6 0.078 1.7E-06 46.5 8.6 72 191-262 2-78 (223)
243 PRK08340 glucose-1-dehydrogena 95.5 0.082 1.8E-06 47.4 9.0 73 191-263 2-86 (259)
244 PRK07774 short chain dehydroge 95.5 0.075 1.6E-06 47.2 8.7 76 188-263 5-93 (250)
245 PRK12743 oxidoreductase; Provi 95.5 0.11 2.3E-06 46.5 9.7 75 189-263 2-90 (256)
246 PRK07231 fabG 3-ketoacyl-(acyl 95.5 0.048 1E-06 48.4 7.4 76 188-263 4-91 (251)
247 PRK07067 sorbitol dehydrogenas 95.5 0.096 2.1E-06 46.8 9.3 76 188-263 5-90 (257)
248 KOG0725|consensus 95.5 0.1 2.2E-06 47.2 9.3 79 187-265 6-101 (270)
249 PRK07326 short chain dehydroge 95.5 0.072 1.6E-06 46.9 8.3 76 188-263 5-92 (237)
250 PRK14192 bifunctional 5,10-met 95.5 0.14 2.9E-06 46.7 10.1 75 187-287 157-231 (283)
251 PF01135 PCMT: Protein-L-isoas 95.5 0.022 4.7E-07 49.4 4.7 97 179-286 67-171 (209)
252 PRK06198 short chain dehydroge 95.5 0.079 1.7E-06 47.4 8.6 78 187-264 4-95 (260)
253 PRK06603 enoyl-(acyl carrier p 95.5 0.093 2E-06 47.2 9.0 76 188-263 7-96 (260)
254 PRK08862 short chain dehydroge 95.4 0.11 2.4E-06 45.7 9.2 76 188-263 4-93 (227)
255 PRK06125 short chain dehydroge 95.4 0.12 2.7E-06 46.2 9.7 76 188-263 6-91 (259)
256 PRK06172 short chain dehydroge 95.4 0.12 2.5E-06 46.2 9.5 76 188-263 6-94 (253)
257 PRK07024 short chain dehydroge 95.4 0.094 2E-06 46.9 8.9 75 189-263 2-88 (257)
258 PRK08278 short chain dehydroge 95.4 0.13 2.8E-06 46.6 9.8 76 188-263 5-100 (273)
259 PRK08303 short chain dehydroge 95.4 0.1 2.2E-06 48.2 9.2 35 188-222 7-41 (305)
260 PRK07035 short chain dehydroge 95.4 0.12 2.7E-06 46.0 9.5 76 188-263 7-95 (252)
261 PRK09186 flagellin modificatio 95.4 0.083 1.8E-06 47.1 8.4 76 188-263 3-93 (256)
262 PRK06484 short chain dehydroge 95.4 0.093 2E-06 52.3 9.5 76 188-263 268-353 (520)
263 PRK06953 short chain dehydroge 95.3 0.12 2.7E-06 45.0 9.2 75 190-264 2-81 (222)
264 PRK08085 gluconate 5-dehydroge 95.3 0.12 2.6E-06 46.1 9.3 76 188-263 8-96 (254)
265 PRK06128 oxidoreductase; Provi 95.3 0.12 2.6E-06 47.5 9.5 76 188-263 54-144 (300)
266 PRK06197 short chain dehydroge 95.3 0.1 2.2E-06 48.1 9.0 76 188-263 15-105 (306)
267 PRK08643 acetoin reductase; Va 95.3 0.12 2.7E-06 46.0 9.3 75 189-263 2-89 (256)
268 PRK09242 tropinone reductase; 95.3 0.094 2E-06 46.9 8.5 76 188-263 8-98 (257)
269 PRK06138 short chain dehydroge 95.3 0.081 1.8E-06 47.0 8.1 76 188-263 4-91 (252)
270 PRK13943 protein-L-isoaspartat 95.3 0.1 2.2E-06 48.4 8.8 94 187-286 79-179 (322)
271 COG2910 Putative NADH-flavin r 95.3 0.07 1.5E-06 44.4 6.7 69 191-264 2-73 (211)
272 PF00106 adh_short: short chai 95.3 0.14 3E-06 42.3 8.9 76 190-265 1-92 (167)
273 PRK12938 acetyacetyl-CoA reduc 95.3 0.15 3.3E-06 45.1 9.7 77 188-264 2-92 (246)
274 PRK08416 7-alpha-hydroxysteroi 95.3 0.13 2.9E-06 46.0 9.4 75 188-262 7-96 (260)
275 PRK08690 enoyl-(acyl carrier p 95.2 0.13 2.8E-06 46.2 9.3 76 188-263 5-94 (261)
276 PRK08277 D-mannonate oxidoredu 95.2 0.13 2.8E-06 46.6 9.3 76 188-263 9-97 (278)
277 PRK13940 glutamyl-tRNA reducta 95.2 0.21 4.6E-06 48.0 11.0 94 188-290 180-276 (414)
278 PRK07074 short chain dehydroge 95.2 0.15 3.2E-06 45.6 9.6 76 189-264 2-88 (257)
279 TIGR02622 CDP_4_6_dhtase CDP-g 95.2 0.12 2.5E-06 48.7 9.3 76 188-263 3-85 (349)
280 PRK06550 fabG 3-ketoacyl-(acyl 95.2 0.047 1E-06 48.0 6.2 73 188-263 4-77 (235)
281 PRK08226 short chain dehydroge 95.2 0.14 3.1E-06 45.8 9.3 76 188-263 5-92 (263)
282 PRK08263 short chain dehydroge 95.2 0.11 2.5E-06 46.9 8.7 76 189-264 3-88 (275)
283 PRK09135 pteridine reductase; 95.2 0.15 3.2E-06 45.1 9.3 77 187-263 4-95 (249)
284 PRK08159 enoyl-(acyl carrier p 95.1 0.13 2.9E-06 46.5 9.1 76 188-263 9-98 (272)
285 PRK07023 short chain dehydroge 95.1 0.12 2.7E-06 45.7 8.6 73 191-263 3-87 (243)
286 PRK07097 gluconate 5-dehydroge 95.1 0.17 3.7E-06 45.5 9.6 76 188-263 9-97 (265)
287 PRK08213 gluconate 5-dehydroge 95.1 0.16 3.6E-06 45.4 9.4 76 188-263 11-99 (259)
288 PRK06181 short chain dehydroge 95.1 0.12 2.6E-06 46.3 8.6 74 190-263 2-88 (263)
289 PF02882 THF_DHG_CYH_C: Tetrah 95.1 0.43 9.4E-06 39.3 10.9 94 165-288 16-109 (160)
290 PRK07984 enoyl-(acyl carrier p 95.1 0.13 2.8E-06 46.4 8.6 76 188-263 5-94 (262)
291 PRK06482 short chain dehydroge 95.1 0.12 2.6E-06 46.7 8.6 75 190-264 3-87 (276)
292 PRK06171 sorbitol-6-phosphate 95.1 0.051 1.1E-06 48.9 6.1 74 188-263 8-87 (266)
293 PRK07985 oxidoreductase; Provi 95.1 0.08 1.7E-06 48.6 7.4 76 188-263 48-138 (294)
294 PRK08594 enoyl-(acyl carrier p 95.0 0.15 3.2E-06 45.7 9.0 76 188-263 6-97 (257)
295 TIGR01472 gmd GDP-mannose 4,6- 95.0 0.13 2.9E-06 48.2 9.0 74 190-263 1-88 (343)
296 PRK07791 short chain dehydroge 95.0 0.17 3.6E-06 46.3 9.4 77 187-263 4-102 (286)
297 PLN02653 GDP-mannose 4,6-dehyd 95.0 0.099 2.1E-06 49.0 8.1 76 188-263 5-93 (340)
298 PRK14175 bifunctional 5,10-met 95.0 0.27 5.8E-06 44.6 10.3 95 165-289 138-232 (286)
299 PRK06124 gluconate 5-dehydroge 95.0 0.2 4.3E-06 44.7 9.6 76 188-263 10-98 (256)
300 PRK07792 fabG 3-ketoacyl-(acyl 95.0 0.18 3.8E-06 46.6 9.4 77 188-264 11-100 (306)
301 PLN02780 ketoreductase/ oxidor 95.0 0.11 2.3E-06 48.4 8.0 76 188-263 52-142 (320)
302 PRK12429 3-hydroxybutyrate deh 94.9 0.2 4.3E-06 44.6 9.5 76 188-263 3-91 (258)
303 PRK06113 7-alpha-hydroxysteroi 94.9 0.21 4.5E-06 44.6 9.6 76 188-263 10-98 (255)
304 PRK05557 fabG 3-ketoacyl-(acyl 94.9 0.27 5.8E-06 43.4 10.2 76 188-263 4-93 (248)
305 PRK12936 3-ketoacyl-(acyl-carr 94.9 0.15 3.3E-06 45.0 8.6 76 188-263 5-90 (245)
306 PRK05875 short chain dehydroge 94.9 0.17 3.8E-06 45.7 9.1 76 188-263 6-96 (276)
307 PF01370 Epimerase: NAD depend 94.9 0.081 1.8E-06 46.4 6.8 73 192-264 1-76 (236)
308 PRK03369 murD UDP-N-acetylmura 94.9 0.1 2.2E-06 51.6 8.1 72 187-265 10-82 (488)
309 PRK08703 short chain dehydroge 94.9 0.18 4E-06 44.4 9.1 36 188-223 5-40 (239)
310 PF05368 NmrA: NmrA-like famil 94.9 0.16 3.4E-06 44.8 8.6 71 192-264 1-75 (233)
311 PRK07666 fabG 3-ketoacyl-(acyl 94.9 0.19 4.2E-06 44.2 9.2 77 188-264 6-95 (239)
312 PRK07775 short chain dehydroge 94.8 0.26 5.6E-06 44.6 10.1 77 188-264 9-98 (274)
313 PRK10538 malonic semialdehyde 94.8 0.21 4.5E-06 44.4 9.3 73 191-263 2-84 (248)
314 PRK12384 sorbitol-6-phosphate 94.8 0.22 4.9E-06 44.4 9.5 75 189-263 2-91 (259)
315 TIGR01289 LPOR light-dependent 94.8 0.19 4.2E-06 46.5 9.3 75 189-263 3-91 (314)
316 CHL00194 ycf39 Ycf39; Provisio 94.8 0.18 3.9E-06 46.8 9.1 71 191-263 2-74 (317)
317 PRK08945 putative oxoacyl-(acy 94.8 0.17 3.6E-06 44.9 8.5 77 187-263 10-102 (247)
318 PRK06997 enoyl-(acyl carrier p 94.8 0.19 4.2E-06 45.1 9.0 76 188-263 5-94 (260)
319 PRK06914 short chain dehydroge 94.7 0.2 4.2E-06 45.5 9.0 75 189-263 3-91 (280)
320 PRK08063 enoyl-(acyl carrier p 94.7 0.23 5E-06 44.0 9.3 76 188-263 3-92 (250)
321 PRK08220 2,3-dihydroxybenzoate 94.7 0.16 3.5E-06 45.1 8.4 73 188-264 7-87 (252)
322 PRK06701 short chain dehydroge 94.7 0.23 5.1E-06 45.4 9.5 77 187-263 44-134 (290)
323 PRK12809 putative oxidoreducta 94.7 0.15 3.2E-06 52.3 8.8 74 188-265 309-407 (639)
324 PRK12937 short chain dehydroge 94.7 0.3 6.4E-06 43.1 9.8 77 187-263 3-93 (245)
325 PRK08251 short chain dehydroge 94.6 0.17 3.7E-06 44.9 8.2 75 189-263 2-91 (248)
326 PRK09134 short chain dehydroge 94.6 0.33 7.2E-06 43.4 10.1 77 187-263 7-97 (258)
327 PRK13656 trans-2-enoyl-CoA red 94.6 0.28 6.1E-06 46.3 9.7 78 187-265 39-143 (398)
328 PRK05650 short chain dehydroge 94.6 0.24 5.2E-06 44.6 9.2 74 191-264 2-88 (270)
329 PRK12826 3-ketoacyl-(acyl-carr 94.6 0.24 5.2E-06 43.9 9.0 77 188-264 5-94 (251)
330 PRK12935 acetoacetyl-CoA reduc 94.6 0.28 6.1E-06 43.4 9.5 76 188-263 5-94 (247)
331 TIGR02685 pter_reduc_Leis pter 94.5 0.18 4E-06 45.3 8.3 74 190-263 2-94 (267)
332 PLN00141 Tic62-NAD(P)-related 94.5 0.2 4.4E-06 44.7 8.5 74 188-263 16-95 (251)
333 PRK08261 fabG 3-ketoacyl-(acyl 94.5 0.037 7.9E-07 54.2 3.9 88 187-289 32-125 (450)
334 TIGR03206 benzo_BadH 2-hydroxy 94.5 0.33 7.1E-06 43.0 9.8 76 188-263 2-90 (250)
335 KOG1208|consensus 94.5 0.24 5.1E-06 45.8 8.8 76 188-263 34-124 (314)
336 PF02670 DXP_reductoisom: 1-de 94.5 0.32 7E-06 38.4 8.3 90 192-284 1-118 (129)
337 cd05212 NAD_bind_m-THF_DH_Cycl 94.4 0.58 1.3E-05 37.7 10.0 76 187-288 26-101 (140)
338 TIGR01214 rmlD dTDP-4-dehydror 94.4 0.14 3E-06 46.6 7.2 60 191-263 1-60 (287)
339 PRK14191 bifunctional 5,10-met 94.4 0.46 1E-05 43.0 10.2 94 165-288 137-230 (285)
340 PRK14190 bifunctional 5,10-met 94.4 0.65 1.4E-05 42.1 11.2 95 165-289 138-232 (284)
341 PRK08936 glucose-1-dehydrogena 94.4 0.21 4.6E-06 44.7 8.3 76 188-263 6-95 (261)
342 PRK12745 3-ketoacyl-(acyl-carr 94.3 0.35 7.7E-06 43.0 9.6 74 190-263 3-90 (256)
343 KOG1210|consensus 94.3 0.29 6.2E-06 44.4 8.7 78 187-264 31-123 (331)
344 PRK13942 protein-L-isoaspartat 94.3 0.19 4.2E-06 43.7 7.6 96 179-286 71-175 (212)
345 PRK07370 enoyl-(acyl carrier p 94.3 0.24 5.2E-06 44.4 8.4 76 188-263 5-97 (258)
346 PF02719 Polysacc_synt_2: Poly 94.3 0.12 2.6E-06 46.9 6.2 73 192-264 1-88 (293)
347 COG0169 AroE Shikimate 5-dehyd 94.2 0.26 5.5E-06 44.8 8.3 72 187-265 124-202 (283)
348 PLN02695 GDP-D-mannose-3',5'-e 94.2 0.2 4.3E-06 47.7 8.0 75 187-263 19-95 (370)
349 PRK00377 cbiT cobalt-precorrin 94.2 0.23 5.1E-06 42.6 7.8 93 187-285 39-143 (198)
350 PRK06101 short chain dehydroge 94.2 0.3 6.5E-06 43.2 8.8 74 190-263 2-81 (240)
351 PRK11705 cyclopropane fatty ac 94.2 0.2 4.3E-06 47.8 7.9 108 168-286 151-266 (383)
352 cd05311 NAD_bind_2_malic_enz N 94.1 0.9 1.9E-05 39.9 11.4 91 188-289 24-130 (226)
353 PRK08642 fabG 3-ketoacyl-(acyl 94.1 0.38 8.3E-06 42.7 9.4 76 188-263 4-91 (253)
354 TIGR02632 RhaD_aldol-ADH rhamn 94.1 0.27 5.9E-06 50.7 9.3 76 188-263 413-503 (676)
355 PRK06077 fabG 3-ketoacyl-(acyl 94.1 0.4 8.6E-06 42.5 9.4 76 188-263 5-94 (252)
356 TIGR01318 gltD_gamma_fam gluta 94.1 0.17 3.6E-06 49.8 7.4 75 188-265 140-238 (467)
357 PRK14189 bifunctional 5,10-met 94.1 0.39 8.4E-06 43.5 9.1 76 187-288 156-231 (285)
358 TIGR01963 PHB_DH 3-hydroxybuty 94.0 0.31 6.7E-06 43.3 8.7 74 190-263 2-88 (255)
359 PRK07102 short chain dehydroge 94.0 0.34 7.4E-06 42.8 8.9 74 190-263 2-86 (243)
360 PLN02989 cinnamyl-alcohol dehy 94.0 0.27 5.8E-06 45.7 8.5 75 187-263 3-87 (325)
361 TIGR01829 AcAcCoA_reduct aceto 94.0 0.26 5.6E-06 43.4 8.0 74 190-263 1-88 (242)
362 PLN02240 UDP-glucose 4-epimera 93.9 0.34 7.5E-06 45.5 9.1 76 188-263 4-91 (352)
363 COG1748 LYS9 Saccharopine dehy 93.9 0.17 3.6E-06 47.9 6.6 91 190-287 2-99 (389)
364 TIGR02197 heptose_epim ADP-L-g 93.9 0.18 3.9E-06 46.5 7.0 72 192-263 1-76 (314)
365 PRK12548 shikimate 5-dehydroge 93.9 0.61 1.3E-05 42.7 10.3 35 188-223 125-160 (289)
366 PLN02986 cinnamyl-alcohol dehy 93.9 0.29 6.2E-06 45.4 8.3 37 187-223 3-39 (322)
367 PRK12824 acetoacetyl-CoA reduc 93.9 0.32 6.9E-06 42.9 8.3 75 190-264 3-91 (245)
368 PRK00258 aroE shikimate 5-dehy 93.9 0.4 8.6E-06 43.6 9.0 90 188-286 122-220 (278)
369 PRK13944 protein-L-isoaspartat 93.8 0.28 6.1E-06 42.4 7.6 92 187-286 71-172 (205)
370 PRK05599 hypothetical protein; 93.8 0.36 7.8E-06 42.9 8.6 72 191-263 2-87 (246)
371 PLN02730 enoyl-[acyl-carrier-p 93.8 0.48 1E-05 43.7 9.5 31 188-218 8-40 (303)
372 cd05211 NAD_bind_Glu_Leu_Phe_V 93.8 0.48 1E-05 41.3 9.0 34 188-222 22-55 (217)
373 PRK07578 short chain dehydroge 93.8 0.38 8.2E-06 41.1 8.4 63 191-263 2-65 (199)
374 PF04321 RmlD_sub_bind: RmlD s 93.8 0.098 2.1E-06 47.8 4.9 60 191-263 2-61 (286)
375 TIGR01809 Shik-DH-AROM shikima 93.8 0.27 5.8E-06 44.9 7.7 74 188-265 124-202 (282)
376 PLN02896 cinnamyl-alcohol dehy 93.8 0.4 8.8E-06 45.2 9.3 75 187-263 8-89 (353)
377 PRK05855 short chain dehydroge 93.8 0.35 7.7E-06 48.7 9.4 77 188-264 314-403 (582)
378 PRK12749 quinate/shikimate deh 93.7 0.57 1.2E-05 42.8 9.8 75 188-263 123-206 (288)
379 PRK12746 short chain dehydroge 93.7 0.53 1.1E-05 41.9 9.5 35 188-222 5-40 (254)
380 PRK12549 shikimate 5-dehydroge 93.7 0.52 1.1E-05 43.0 9.5 69 188-262 126-201 (284)
381 TIGR02415 23BDH acetoin reduct 93.7 0.47 1E-05 42.1 9.2 74 190-263 1-87 (254)
382 COG1086 Predicted nucleoside-d 93.7 0.42 9.1E-06 46.9 9.1 78 187-264 248-336 (588)
383 TIGR01179 galE UDP-glucose-4-e 93.6 0.26 5.6E-06 45.6 7.5 73 191-263 1-80 (328)
384 PRK12744 short chain dehydroge 93.6 0.51 1.1E-05 42.1 9.2 76 188-263 7-99 (257)
385 PRK14027 quinate/shikimate deh 93.6 0.62 1.3E-05 42.5 9.7 72 188-263 126-204 (283)
386 PRK12827 short chain dehydroge 93.6 0.53 1.1E-05 41.6 9.2 77 188-264 5-98 (249)
387 PRK12550 shikimate 5-dehydroge 93.5 0.55 1.2E-05 42.5 9.2 66 187-263 120-188 (272)
388 TIGR03589 PseB UDP-N-acetylglu 93.5 0.43 9.4E-06 44.4 8.8 74 188-263 3-84 (324)
389 PLN00198 anthocyanidin reducta 93.4 0.31 6.8E-06 45.6 7.8 74 188-263 8-90 (338)
390 TIGR01181 dTDP_gluc_dehyt dTDP 93.4 0.29 6.3E-06 45.0 7.5 73 191-263 1-83 (317)
391 PRK12825 fabG 3-ketoacyl-(acyl 93.4 0.73 1.6E-05 40.5 9.8 76 188-263 5-94 (249)
392 PRK09009 C factor cell-cell si 93.4 0.29 6.3E-06 43.0 7.1 73 191-264 2-78 (235)
393 PRK11579 putative oxidoreducta 93.4 2.4 5.2E-05 39.9 13.7 138 190-352 5-144 (346)
394 PF12847 Methyltransf_18: Meth 93.3 0.11 2.4E-06 39.7 3.9 91 188-285 1-109 (112)
395 COG0373 HemA Glutamyl-tRNA red 93.3 0.8 1.7E-05 43.7 10.1 72 188-266 177-251 (414)
396 PRK05579 bifunctional phosphop 93.3 0.3 6.5E-06 46.8 7.4 75 188-265 187-279 (399)
397 PRK06947 glucose-1-dehydrogena 93.2 0.8 1.7E-05 40.5 9.8 74 190-263 3-90 (248)
398 PRK09987 dTDP-4-dehydrorhamnos 93.2 0.26 5.7E-06 45.3 6.8 63 191-263 2-64 (299)
399 PRK06940 short chain dehydroge 93.2 0.66 1.4E-05 42.0 9.3 74 189-264 2-87 (275)
400 TIGR03466 HpnA hopanoid-associ 93.2 0.35 7.6E-06 44.8 7.8 71 191-263 2-74 (328)
401 PLN02214 cinnamoyl-CoA reducta 93.2 0.45 9.7E-06 44.7 8.5 75 187-263 8-91 (342)
402 PRK08219 short chain dehydroge 93.2 0.67 1.5E-05 40.2 9.2 74 190-264 4-82 (227)
403 COG1087 GalE UDP-glucose 4-epi 93.2 0.66 1.4E-05 42.0 8.8 74 191-264 2-78 (329)
404 KOG1014|consensus 93.2 0.56 1.2E-05 42.5 8.5 77 187-264 47-137 (312)
405 KOG1209|consensus 93.2 0.75 1.6E-05 39.4 8.6 79 187-265 5-93 (289)
406 PRK14982 acyl-ACP reductase; P 93.1 1.2 2.7E-05 41.5 11.0 90 188-289 154-248 (340)
407 cd01065 NAD_bind_Shikimate_DH 93.1 1.4 3E-05 35.9 10.3 91 188-286 18-115 (155)
408 PRK09730 putative NAD(P)-bindi 93.0 0.74 1.6E-05 40.6 9.3 74 190-263 2-89 (247)
409 PRK12859 3-ketoacyl-(acyl-carr 93.0 0.52 1.1E-05 42.1 8.3 33 188-220 5-39 (256)
410 PRK12748 3-ketoacyl-(acyl-carr 93.0 0.66 1.4E-05 41.4 9.0 35 188-222 4-40 (256)
411 PRK07201 short chain dehydroge 93.0 0.65 1.4E-05 47.8 10.0 75 189-263 371-458 (657)
412 PRK05447 1-deoxy-D-xylulose 5- 93.0 0.86 1.9E-05 43.1 9.8 93 190-285 2-120 (385)
413 cd01075 NAD_bind_Leu_Phe_Val_D 93.0 1.1 2.3E-05 38.6 9.8 68 188-264 27-96 (200)
414 PLN02572 UDP-sulfoquinovose sy 93.0 0.55 1.2E-05 45.8 9.0 33 188-220 46-78 (442)
415 TIGR00507 aroE shikimate 5-deh 93.0 0.82 1.8E-05 41.4 9.6 90 187-286 115-213 (270)
416 PRK10792 bifunctional 5,10-met 93.0 0.81 1.8E-05 41.4 9.3 94 165-288 139-232 (285)
417 PRK06718 precorrin-2 dehydroge 93.0 0.3 6.5E-06 42.1 6.4 75 188-269 9-86 (202)
418 PRK07069 short chain dehydroge 93.0 0.56 1.2E-05 41.5 8.4 73 192-264 2-90 (251)
419 PRK05565 fabG 3-ketoacyl-(acyl 93.0 0.41 8.9E-06 42.2 7.5 77 188-264 4-94 (247)
420 PRK10675 UDP-galactose-4-epime 92.9 0.61 1.3E-05 43.5 8.9 74 191-264 2-84 (338)
421 PRK15181 Vi polysaccharide bio 92.9 0.53 1.1E-05 44.3 8.5 47 171-222 2-48 (348)
422 PRK07041 short chain dehydroge 92.8 0.5 1.1E-05 41.3 7.8 71 193-263 1-79 (230)
423 PRK12769 putative oxidoreducta 92.8 0.4 8.6E-06 49.4 8.0 74 188-265 326-424 (654)
424 TIGR00080 pimt protein-L-isoas 92.8 0.52 1.1E-05 41.0 7.7 92 187-286 76-176 (215)
425 PF01262 AlaDh_PNT_C: Alanine 92.8 0.25 5.4E-06 41.2 5.5 48 188-236 19-67 (168)
426 PLN02662 cinnamyl-alcohol dehy 92.8 0.4 8.7E-06 44.4 7.4 35 188-222 3-37 (322)
427 COG1028 FabG Dehydrogenases wi 92.7 0.65 1.4E-05 41.2 8.5 78 187-264 3-97 (251)
428 COG0027 PurT Formate-dependent 92.7 1.6 3.5E-05 39.6 10.5 71 188-259 11-81 (394)
429 PLN00016 RNA-binding protein; 92.7 0.48 1E-05 45.2 8.0 97 188-288 51-165 (378)
430 COG1091 RfbD dTDP-4-dehydrorha 92.6 0.32 6.9E-06 43.9 6.2 58 192-263 3-60 (281)
431 TIGR03649 ergot_EASG ergot alk 92.6 0.34 7.4E-06 44.0 6.7 71 191-263 1-77 (285)
432 KOG1502|consensus 92.6 0.75 1.6E-05 42.4 8.6 73 188-263 5-88 (327)
433 TIGR01777 yfcH conserved hypot 92.6 0.19 4E-06 45.8 4.9 67 192-264 1-68 (292)
434 TIGR00406 prmA ribosomal prote 92.6 0.21 4.5E-06 45.7 5.1 92 187-286 158-258 (288)
435 PLN02928 oxidoreductase family 92.6 0.59 1.3E-05 43.9 8.2 94 188-287 158-262 (347)
436 PLN02686 cinnamoyl-CoA reducta 92.6 0.51 1.1E-05 44.8 7.9 36 187-222 51-86 (367)
437 PLN00015 protochlorophyllide r 92.5 0.54 1.2E-05 43.4 8.0 71 193-263 1-85 (308)
438 PRK06123 short chain dehydroge 92.5 1.2 2.5E-05 39.4 9.8 76 189-264 2-91 (248)
439 PRK13243 glyoxylate reductase; 92.5 0.71 1.5E-05 43.2 8.6 88 188-287 149-240 (333)
440 PRK10217 dTDP-glucose 4,6-dehy 92.4 0.42 9.1E-06 45.0 7.2 74 190-263 2-84 (355)
441 PRK14169 bifunctional 5,10-met 92.4 1.1 2.3E-05 40.6 9.3 76 187-288 154-229 (282)
442 PRK14176 bifunctional 5,10-met 92.4 1.2 2.6E-05 40.4 9.5 94 165-288 144-237 (287)
443 PLN02583 cinnamoyl-CoA reducta 92.3 1 2.2E-05 41.3 9.4 36 187-222 4-39 (297)
444 PRK14173 bifunctional 5,10-met 92.3 1 2.2E-05 40.8 9.0 94 165-288 135-228 (287)
445 KOG1610|consensus 92.2 4.9 0.00011 36.7 13.1 77 187-263 27-116 (322)
446 PLN02427 UDP-apiose/xylose syn 92.2 0.75 1.6E-05 44.0 8.7 74 188-263 13-96 (386)
447 cd01079 NAD_bind_m-THF_DH NAD 92.1 1.6 3.4E-05 37.1 9.3 95 187-288 60-157 (197)
448 PLN02260 probable rhamnose bio 92.0 0.65 1.4E-05 48.0 8.4 77 188-264 5-91 (668)
449 TIGR01532 E4PD_g-proteo D-eryt 91.9 0.54 1.2E-05 43.7 7.0 96 191-291 1-124 (325)
450 PF01118 Semialdhyde_dh: Semia 91.9 0.42 9.2E-06 37.4 5.5 89 191-288 1-98 (121)
451 TIGR01830 3oxo_ACP_reduc 3-oxo 91.8 0.99 2.2E-05 39.5 8.5 73 192-264 1-87 (239)
452 PRK14170 bifunctional 5,10-met 91.8 1.3 2.9E-05 40.0 9.1 94 165-288 137-230 (284)
453 PF12242 Eno-Rase_NADH_b: NAD( 91.8 0.65 1.4E-05 32.7 5.5 35 187-221 37-72 (78)
454 PRK14194 bifunctional 5,10-met 91.8 1.5 3.3E-05 40.1 9.5 93 165-287 139-231 (301)
455 TIGR00715 precor6x_red precorr 91.8 0.71 1.5E-05 41.3 7.4 71 191-263 2-75 (256)
456 PRK14177 bifunctional 5,10-met 91.7 1.4 3.1E-05 39.9 9.2 76 187-288 157-232 (284)
457 PF13241 NAD_binding_7: Putati 91.7 0.13 2.9E-06 39.0 2.4 85 188-286 6-90 (103)
458 PRK14172 bifunctional 5,10-met 91.7 1.5 3.1E-05 39.7 9.2 76 187-288 156-231 (278)
459 KOG4169|consensus 91.6 0.71 1.5E-05 40.0 6.8 76 188-263 4-93 (261)
460 PRK14166 bifunctional 5,10-met 91.6 1.5 3.2E-05 39.7 9.2 94 165-288 137-230 (282)
461 PF08659 KR: KR domain; Inter 91.6 1.3 2.8E-05 37.3 8.5 74 191-264 2-92 (181)
462 PLN00203 glutamyl-tRNA reducta 91.5 1.1 2.3E-05 44.6 8.9 72 189-266 266-342 (519)
463 COG0686 Ald Alanine dehydrogen 91.4 1.9 4.1E-05 39.3 9.5 94 188-287 167-268 (371)
464 PRK14106 murD UDP-N-acetylmura 91.4 0.9 2E-05 44.4 8.4 70 188-264 4-79 (450)
465 PRK14187 bifunctional 5,10-met 91.2 1.7 3.6E-05 39.6 9.2 76 187-288 158-233 (294)
466 PLN02516 methylenetetrahydrofo 91.2 1.5 3.3E-05 40.0 8.9 94 165-288 147-240 (299)
467 COG2227 UbiG 2-polyprenyl-3-me 91.2 0.9 1.9E-05 39.8 7.1 90 188-285 59-159 (243)
468 PRK14180 bifunctional 5,10-met 91.2 1.7 3.8E-05 39.3 9.2 94 165-288 138-231 (282)
469 PRK13581 D-3-phosphoglycerate 91.1 1.2 2.5E-05 44.6 8.9 88 188-287 139-230 (526)
470 PF01113 DapB_N: Dihydrodipico 91.0 1.1 2.4E-05 35.2 7.1 89 191-288 2-98 (124)
471 PRK07340 ornithine cyclodeamin 91.0 3.8 8.2E-05 37.8 11.6 91 187-289 123-219 (304)
472 PRK01438 murD UDP-N-acetylmura 90.9 1.1 2.5E-05 44.1 8.7 70 188-265 15-90 (480)
473 PRK14178 bifunctional 5,10-met 90.9 2 4.3E-05 38.9 9.3 75 188-288 151-225 (279)
474 PRK08125 bifunctional UDP-gluc 90.9 0.89 1.9E-05 46.9 8.1 75 187-263 313-392 (660)
475 PLN02650 dihydroflavonol-4-red 90.9 1.2 2.6E-05 41.9 8.4 36 187-222 3-38 (351)
476 PRK14188 bifunctional 5,10-met 90.9 2.2 4.7E-05 39.1 9.6 94 165-289 138-232 (296)
477 PRK06719 precorrin-2 dehydroge 90.8 0.62 1.3E-05 38.4 5.6 75 188-269 12-86 (157)
478 TIGR01470 cysG_Nterm siroheme 90.8 0.92 2E-05 39.2 7.0 72 188-265 8-81 (205)
479 PRK14186 bifunctional 5,10-met 90.8 2 4.3E-05 39.2 9.2 76 188-289 157-232 (297)
480 TIGR01831 fabG_rel 3-oxoacyl-( 90.8 1.5 3.3E-05 38.4 8.6 72 192-263 1-86 (239)
481 PRK08300 acetaldehyde dehydrog 90.7 0.91 2E-05 41.5 7.1 88 189-286 4-99 (302)
482 PRK07502 cyclohexadienyl dehyd 90.7 1.4 2.9E-05 40.8 8.5 90 189-287 6-100 (307)
483 PF13478 XdhC_C: XdhC Rossmann 90.7 0.51 1.1E-05 37.8 4.9 30 192-222 1-30 (136)
484 TIGR02356 adenyl_thiF thiazole 90.7 1.2 2.6E-05 38.4 7.6 34 188-222 20-54 (202)
485 PRK11908 NAD-dependent epimera 90.6 1.3 2.7E-05 41.7 8.3 70 191-262 3-77 (347)
486 cd05313 NAD_bind_2_Glu_DH NAD( 90.5 1.4 3E-05 39.3 7.9 33 188-221 37-69 (254)
487 PLN02166 dTDP-glucose 4,6-dehy 90.5 0.7 1.5E-05 45.0 6.6 36 187-222 118-153 (436)
488 PRK14874 aspartate-semialdehyd 90.5 0.72 1.6E-05 43.2 6.4 89 190-288 2-95 (334)
489 PLN02206 UDP-glucuronate decar 90.5 0.89 1.9E-05 44.4 7.3 35 187-221 117-151 (442)
490 PRK07574 formate dehydrogenase 90.5 1.6 3.6E-05 41.5 8.9 89 188-287 191-284 (385)
491 TIGR02469 CbiT precorrin-6Y C5 90.5 2.2 4.8E-05 32.9 8.4 93 187-286 18-121 (124)
492 PLN03075 nicotianamine synthas 90.4 1 2.2E-05 41.1 7.1 97 187-286 122-232 (296)
493 PRK14182 bifunctional 5,10-met 90.4 2.4 5.1E-05 38.4 9.3 94 165-288 137-230 (282)
494 PLN02778 3,5-epimerase/4-reduc 90.3 1.4 3E-05 40.5 8.1 33 187-219 7-39 (298)
495 PRK10084 dTDP-glucose 4,6 dehy 90.3 1.7 3.6E-05 40.9 8.9 73 191-263 2-83 (352)
496 KOG1252|consensus 90.2 1.2 2.6E-05 40.8 7.2 55 179-237 97-155 (362)
497 PF03853 YjeF_N: YjeF-related 90.2 3 6.5E-05 34.8 9.3 73 187-263 23-109 (169)
498 TIGR02992 ectoine_eutC ectoine 90.0 5.6 0.00012 37.1 12.0 91 187-288 127-225 (326)
499 PF03435 Saccharop_dh: Sacchar 90.0 1 2.2E-05 43.1 7.1 89 192-286 1-97 (386)
500 PRK14171 bifunctional 5,10-met 90.0 2.5 5.5E-05 38.3 9.2 76 187-288 157-232 (288)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=6.2e-56 Score=399.62 Aligned_cols=311 Identities=27% Similarity=0.408 Sum_probs=265.5
Q ss_pred ccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccc
Q psy9949 24 STRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTL 103 (383)
Q Consensus 24 ~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~ 103 (383)
+++|||+++.++++| ++++ +++.|+|+++||+|+|+|+|||++|++.++|.. ....+|+++
T Consensus 1 ~~~mkA~~~~~~~~p--l~i~-e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~----------------~~~~~P~ip 61 (339)
T COG1064 1 MMTMKAAVLKKFGQP--LEIE-EVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDW----------------PVPKLPLIP 61 (339)
T ss_pred CcceEEEEEccCCCC--ceEE-eccCCCCCCCeEEEEEEEEeecchhhhhhcCCC----------------CCCCCCccC
Confidence 468999999999988 7888 899999999999999999999999999999982 334599999
Q ss_pred cCceeEEEEecCCCCCCCCCCCEEEE-e----------e--------------cCCCCCCceEEEeecCcccccCCCCCC
Q psy9949 104 GRDFCGKIVAKGPRVTDLNIDDVVYG-V----------I--------------QPHKQGSFSKLILADSALVHKKPSNIS 158 (383)
Q Consensus 104 G~e~~G~Vv~vG~~v~~~~~Gd~V~~-~----------~--------------~~~~~g~~a~~~~v~~~~~~~ip~~~~ 158 (383)
|||.+|+|+++|++|++|++||||.. + | +.+.+|+||||+++++++++++|++++
T Consensus 62 GHEivG~V~~vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d 141 (339)
T COG1064 62 GHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLD 141 (339)
T ss_pred CcceEEEEEEecCCCccCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCC
Confidence 99999999999999999999999965 2 1 124579999999999999999999999
Q ss_pred HHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeee
Q psy9949 159 DEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVI 237 (383)
Q Consensus 159 ~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~ 237 (383)
+++||++.|++.|+|++|+ ..++ ++|++|+|.| .|++|++++|+|+++|++|++++++ +++++++++|++.++
T Consensus 142 ~~~aApllCaGiT~y~alk-~~~~----~pG~~V~I~G-~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i 215 (339)
T COG1064 142 LAEAAPLLCAGITTYRALK-KANV----KPGKWVAVVG-AGGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVI 215 (339)
T ss_pred hhhhhhhhcCeeeEeeehh-hcCC----CCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEE
Confidence 9999999999999999998 5888 9999999999 7899999999999999999999966 567899999999999
Q ss_pred eCCChHHHHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhcc
Q psy9949 238 DYNEPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFES 317 (383)
Q Consensus 238 ~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (383)
+.++.++.+.+.+. +|+++|+++ +...... ++.++ ++|+++++|.+.. .. ...++..
T Consensus 216 ~~~~~~~~~~~~~~--~d~ii~tv~-~~~~~~~-l~~l~--~~G~~v~vG~~~~----------~~-~~~~~~~------ 272 (339)
T COG1064 216 NSSDSDALEAVKEI--ADAIIDTVG-PATLEPS-LKALR--RGGTLVLVGLPGG----------GP-IPLLPAF------ 272 (339)
T ss_pred EcCCchhhHHhHhh--CcEEEECCC-hhhHHHH-HHHHh--cCCEEEEECCCCC----------cc-cCCCCHH------
Confidence 98777777777654 999999999 5544443 99999 9999999965420 00 0001111
Q ss_pred ccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 318 GELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
.+.+++..+ .++...++.++++++++..+|++++.+.+.++++++++|++.|.+++..||+||++
T Consensus 273 ~li~~~~~i-~GS~~g~~~d~~e~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~ 337 (339)
T COG1064 273 LLILKEISI-VGSLVGTRADLEEALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDM 337 (339)
T ss_pred HhhhcCeEE-EEEecCCHHHHHHHHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecC
Confidence 123333343 35666789999999999999999999978999999999999999999999999975
No 2
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=1.9e-50 Score=373.10 Aligned_cols=321 Identities=30% Similarity=0.416 Sum_probs=262.3
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
|+++++.+.++++.++++ ++|.|+|++|||||||.++|||+.|+...+|.. .....+|+++|.|
T Consensus 1 mka~~~~~~g~~~~l~~~-e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~---------------~~~~~~P~i~G~d 64 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVV-EVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLA---------------PPVRPLPFIPGSE 64 (326)
T ss_pred CeEEEEeccCCCceeEEE-ecCCCCCCCCeEEEEEEEeecChHHHHhccCCC---------------CCCCCCCCcccce
Confidence 789999999999889999 899999999999999999999999999998851 2345689999999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccC
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVY 186 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~ 186 (383)
++|+|+++|++|++|++||||+.+.....+|+|+||+++|++.++++|+++|+++||+++++++|||++|....++
T Consensus 65 ~aG~V~avG~~V~~~~~GdrV~~~~~~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l---- 140 (326)
T COG0604 65 AAGVVVAVGSGVTGFKVGDRVAALGGVGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGL---- 140 (326)
T ss_pred eEEEEEEeCCCCCCcCCCCEEEEccCCCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCC----
Confidence 9999999999999999999999985111369999999999999999999999999999999999999999988888
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCchHHHHHhcCCCeeeeCCChHHHHHHhcC---CCccEEEEcCC
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGDAKDLVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVILDAAG 262 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v~d~~g 262 (383)
+++++|||+||+|++|.+++|+||++|+.+++++ ++++.++++++|++++++|.+.++.+++++. .++|+|||++|
T Consensus 141 ~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG 220 (326)
T COG0604 141 KPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVG 220 (326)
T ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCC
Confidence 9999999999999999999999999997655555 6666779999999999999999999998764 37999999999
Q ss_pred CCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHH
Q psy9949 263 IPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEIN 342 (383)
Q Consensus 263 ~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (383)
+.....+ +++++ ++|+++.++.... .. ....+...+... ....++............+.++++.
T Consensus 221 ~~~~~~~--l~~l~--~~G~lv~ig~~~g--~~------~~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~l~ 284 (326)
T COG0604 221 GDTFAAS--LAALA--PGGRLVSIGALSG--GP------PVPLNLLPLLGK----RLTLRGVTLGSRDPEALAEALAELF 284 (326)
T ss_pred HHHHHHH--HHHhc--cCCEEEEEecCCC--CC------ccccCHHHHhhc----cEEEEEecceecchHHHHHHHHHHH
Confidence 9988777 99999 9999999965321 00 000001111111 1122222111000022367889999
Q ss_pred HHHHcCCcccccceeecCCCHHHHHHHHhc-CCCCCeEEEeC
Q psy9949 343 KFIERGQIKPVIDSKYNFCELPTAFEKVQQ-GHLRGKIILNA 383 (383)
Q Consensus 343 ~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~-~~~~gkvvl~~ 383 (383)
+++++|++++.+..+|||++..++...... ++..||+||++
T Consensus 285 ~~~~~g~l~~~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 285 DLLASGKLKPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred HHHHcCCCcceeccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence 999999999999999999996555555443 48889999975
No 3
>KOG0023|consensus
Probab=100.00 E-value=1.6e-47 Score=333.49 Aligned_cols=315 Identities=24% Similarity=0.353 Sum_probs=256.5
Q ss_pred CCCcccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCC
Q psy9949 20 HLKYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEF 99 (383)
Q Consensus 20 ~~~~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 99 (383)
++..|.++++|.+..++++..+++. ++++|+++++||+|+++|+|||++|++.+.|.. ...++
T Consensus 3 ~~~~p~k~~g~~~~~~~G~l~p~~~-~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdw----------------g~s~~ 65 (360)
T KOG0023|consen 3 SMSIPEKQFGWAARDPSGVLSPEVF-SFPVREPGENDVLVKIEYCGVCHSDLHAWKGDW----------------GLSKY 65 (360)
T ss_pred cccCchhhEEEEEECCCCCCCccee-EcCCCCCCCCcEEEEEEEEeccchhHHHhhccC----------------CcccC
Confidence 4667899999999999887667778 899999999999999999999999999999872 23678
Q ss_pred CccccCceeEEEEecCCCCCCCCCCCEEEE-------------------eec--------C-----CCCCCceEEEeecC
Q psy9949 100 PLTLGRDFCGKIVAKGPRVTDLNIDDVVYG-------------------VIQ--------P-----HKQGSFSKLILADS 147 (383)
Q Consensus 100 p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~-------------------~~~--------~-----~~~g~~a~~~~v~~ 147 (383)
|.++|||.+|+|+++|++|++|++||||-. +|+ . .+.|+|++|+++++
T Consensus 66 PlV~GHEiaG~VvkvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~ 145 (360)
T KOG0023|consen 66 PLVPGHEIAGVVVKVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDE 145 (360)
T ss_pred CccCCceeeEEEEEECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEee
Confidence 999999999999999999999999999931 111 1 23467999999999
Q ss_pred cccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC--chH
Q psy9949 148 ALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG--DAK 225 (383)
Q Consensus 148 ~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~--~~~ 225 (383)
.++++||++++.+.||++.|++.|+|..|. ..++ .+|+++.|.| +|++|++++|+||++|.+|++++++ +++
T Consensus 146 ~~a~kIP~~~pl~~aAPlLCaGITvYspLk-~~g~----~pG~~vgI~G-lGGLGh~aVq~AKAMG~rV~vis~~~~kke 219 (360)
T KOG0023|consen 146 VFAIKIPENLPLASAAPLLCAGITVYSPLK-RSGL----GPGKWVGIVG-LGGLGHMAVQYAKAMGMRVTVISTSSKKKE 219 (360)
T ss_pred eeEEECCCCCChhhccchhhcceEEeehhH-HcCC----CCCcEEEEec-CcccchHHHHHHHHhCcEEEEEeCCchhHH
Confidence 999999999999999999999999999998 6777 8999999999 5669999999999999999999966 456
Q ss_pred HHHHhcCCCeeeeCC-ChHHHHHHhcC--CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchh
Q psy9949 226 DLVTSLNPNLVIDYN-EPEAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPG 302 (383)
Q Consensus 226 ~~~~~lg~~~v~~~~-~~~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~ 302 (383)
+..+.||++..++.. ++++.+++.+. +++|-+.+. ....... ++++++ .+|++|.+|.|..
T Consensus 220 ea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~~~--a~~~~~~-~~~~lk--~~Gt~V~vg~p~~----------- 283 (360)
T KOG0023|consen 220 EAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTVSNL--AEHALEP-LLGLLK--VNGTLVLVGLPEK----------- 283 (360)
T ss_pred HHHHhcCcceeEEecCCHHHHHHHHHhhcCcceeeeec--cccchHH-HHHHhh--cCCEEEEEeCcCC-----------
Confidence 777889999988877 78888877653 345666555 3332222 288999 9999999965421
Q ss_pred hhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949 303 LVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382 (383)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~ 382 (383)
+..++.... .+. ....-++.-.++.+.+++++++++|.+++.+. ..+++++++||++|++++..+|.|++
T Consensus 284 --~~~~~~~~l------il~-~~~I~GS~vG~~ket~E~Ldf~a~~~ik~~IE-~v~~~~v~~a~erm~kgdV~yRfVvD 353 (360)
T KOG0023|consen 284 --PLKLDTFPL------ILG-RKSIKGSIVGSRKETQEALDFVARGLIKSPIE-LVKLSEVNEAYERMEKGDVRYRFVVD 353 (360)
T ss_pred --cccccchhh------hcc-cEEEEeeccccHHHHHHHHHHHHcCCCcCceE-EEehhHHHHHHHHHHhcCeeEEEEEE
Confidence 111111111 111 12223445567999999999999999988876 78999999999999999999999987
Q ss_pred C
Q psy9949 383 A 383 (383)
Q Consensus 383 ~ 383 (383)
+
T Consensus 354 ~ 354 (360)
T KOG0023|consen 354 V 354 (360)
T ss_pred c
Confidence 4
No 4
>KOG1197|consensus
Probab=100.00 E-value=7.4e-47 Score=317.95 Aligned_cols=319 Identities=24% Similarity=0.338 Sum_probs=273.0
Q ss_pred CcccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCc
Q psy9949 22 KYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPL 101 (383)
Q Consensus 22 ~~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~ 101 (383)
..|+..+.+++++.|..+.++++ +.|.|+|.|+|++||-.|+|+|..|....+|. +...++|+
T Consensus 4 ~~p~~~k~i~v~e~Ggydvlk~e-d~pv~~papgel~iknka~GlNfid~y~RkGl----------------Y~~~plPy 66 (336)
T KOG1197|consen 4 ASPPLLKCIVVTEFGGYDVLKLE-DRPVPPPAPGELTIKNKACGLNFIDLYFRKGL----------------YDPAPLPY 66 (336)
T ss_pred CCCchheEEEEeccCCcceEEEe-eecCCCCCCCceEEeehhcCccHHHHHHhccc----------------cCCCCCCc
Confidence 45778899999999999999999 99999999999999999999999999999997 34578899
Q ss_pred cccCceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhh
Q psy9949 102 TLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAA 181 (383)
Q Consensus 102 ~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~ 181 (383)
+||-|.+|+|+++|++|+++++||||+.+.+ .|.|+|++.+|...++++|+.+++++||++.+.++|||.-+.+..+
T Consensus 67 tpGmEaaGvVvAvG~gvtdrkvGDrVayl~~---~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~ 143 (336)
T KOG1197|consen 67 TPGMEAAGVVVAVGEGVTDRKVGDRVAYLNP---FGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYN 143 (336)
T ss_pred CCCcccceEEEEecCCccccccccEEEEecc---chhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999998874 6999999999999999999999999999999999999999999999
Q ss_pred cCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcC---CCccEE
Q psy9949 182 LGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVI 257 (383)
Q Consensus 182 ~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v 257 (383)
+ ++|++||+|.|+|++|++++|++++.|+.+|++++. ++++.+++.|+.+.++++.+++.+++.+. .|+|++
T Consensus 144 v----kpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~akenG~~h~I~y~~eD~v~~V~kiTngKGVd~v 219 (336)
T KOG1197|consen 144 V----KPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKENGAEHPIDYSTEDYVDEVKKITNGKGVDAV 219 (336)
T ss_pred C----CCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHhcCCcceeeccchhHHHHHHhccCCCCceee
Confidence 9 999999999999999999999999999999999965 57789999999999999999999988864 489999
Q ss_pred EEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHH-
Q psy9949 258 LDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPY- 336 (383)
Q Consensus 258 ~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 336 (383)
+|.+|......+ +.+|+ +.|.+|.+|.. .|+......+.++.....+ .+.+. +++.....+
T Consensus 220 yDsvG~dt~~~s--l~~Lk--~~G~mVSfG~a-------sgl~~p~~l~~ls~k~l~l-----vrpsl--~gYi~g~~el 281 (336)
T KOG1197|consen 220 YDSVGKDTFAKS--LAALK--PMGKMVSFGNA-------SGLIDPIPLNQLSPKALQL-----VRPSL--LGYIDGEVEL 281 (336)
T ss_pred eccccchhhHHH--HHHhc--cCceEEEeccc-------cCCCCCeehhhcChhhhhh-----ccHhh--hcccCCHHHH
Confidence 999999998888 99999 99999999742 1222122222222222111 11111 233332222
Q ss_pred --HHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949 337 --AVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382 (383)
Q Consensus 337 --~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~ 382 (383)
...+++.++-+|.+++.+.++|||+++.+|+.++++.+..||++|.
T Consensus 282 ~~~v~rl~alvnsg~lk~~I~~~ypls~vadA~~diesrktvGkvlLl 329 (336)
T KOG1197|consen 282 VSYVARLFALVNSGHLKIHIDHVYPLSKVADAHADIESRKTVGKVLLL 329 (336)
T ss_pred HHHHHHHHHHhhcCccceeeeeecchHHHHHHHHHHHhhhccceEEEe
Confidence 3466777788999999999999999999999999999999999985
No 5
>KOG0024|consensus
Probab=100.00 E-value=3.3e-47 Score=332.45 Aligned_cols=311 Identities=23% Similarity=0.293 Sum_probs=249.6
Q ss_pred cceeeEEEeecCCCceeEeeccccCCCC-CCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccc
Q psy9949 25 TRTAAWQISSYGGADELQFNDNVKTPIL-KSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTL 103 (383)
Q Consensus 25 ~~~~a~~~~~~g~~~~l~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~ 103 (383)
..|+|+++.++++ ++++ +.|.|++ .|+||+|++.++|||+||+|.+...... ....+.|+++
T Consensus 3 ~~~~A~vl~g~~d---i~i~-~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig-------------~~v~k~Pmvl 65 (354)
T KOG0024|consen 3 ADNLALVLRGKGD---IRIE-QRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIG-------------DFVVKKPMVL 65 (354)
T ss_pred cccceeEEEccCc---eeEe-eCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcC-------------cccccccccc
Confidence 4799999999776 6899 8999988 7999999999999999999999764110 1224679999
Q ss_pred cCceeEEEEecCCCCCCCCCCCEEEEe-------------------------ecCCCCCCceEEEeecCcccccCCCCCC
Q psy9949 104 GRDFCGKIVAKGPRVTDLNIDDVVYGV-------------------------IQPHKQGSFSKLILADSALVHKKPSNIS 158 (383)
Q Consensus 104 G~e~~G~Vv~vG~~v~~~~~Gd~V~~~-------------------------~~~~~~g~~a~~~~v~~~~~~~ip~~~~ 158 (383)
|||.+|+|.++|++|+++++||||+.- ..+..+|++++|++.+++.|+|+|+++|
T Consensus 66 GHEssGiV~evG~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs 145 (354)
T KOG0024|consen 66 GHESSGIVEEVGDEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVS 145 (354)
T ss_pred ccccccchhhhcccccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCc
Confidence 999999999999999999999999632 1245679999999999999999999999
Q ss_pred HHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEe-cCchHHHHHhcCCCee
Q psy9949 159 DEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTC-SGDAKDLVTSLNPNLV 236 (383)
Q Consensus 159 ~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~-~~~~~~~~~~lg~~~v 236 (383)
++++|++.+ ++++||+.+ ++++ ++|.+|||+| +|++|+.+...||++|| +|+.++ ...|+++++++|++.+
T Consensus 146 ~eeGAl~eP-LsV~~HAcr-~~~v----k~Gs~vLV~G-AGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~ 218 (354)
T KOG0024|consen 146 FEEGALIEP-LSVGVHACR-RAGV----KKGSKVLVLG-AGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVT 218 (354)
T ss_pred hhhcccccc-hhhhhhhhh-hcCc----ccCCeEEEEC-CcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEE
Confidence 999999975 788999998 8999 9999999999 99999999999999999 888887 6678999999999987
Q ss_pred eeCCC----hHHHHHHhcCC---CccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHH
Q psy9949 237 IDYNE----PEAMHSIAGAG---PYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFD 309 (383)
Q Consensus 237 ~~~~~----~~~~~~i~~~~---g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (383)
.+... ..+.+.+...- .+|+.|||+|.......+ +.+++ .+|++++.+. +....++.
T Consensus 219 ~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aa-i~a~r--~gGt~vlvg~-------------g~~~~~fp 282 (354)
T KOG0024|consen 219 DPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAA-IKATR--SGGTVVLVGM-------------GAEEIQFP 282 (354)
T ss_pred eeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHH-HHHhc--cCCEEEEecc-------------CCCccccC
Confidence 65544 23334444332 499999999998887766 88888 9999888742 11111222
Q ss_pred HhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCc--ccccceeecCCCHHHHHHHHhcCCCC-CeEEEe
Q psy9949 310 LLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQI--KPVIDSKYNFCELPTAFEKVQQGHLR-GKIILN 382 (383)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~~~~~~~l~~~~~a~~~l~~~~~~-gkvvl~ 382 (383)
+....+ ++..++ +.+++...++..+++++++|++ ++++++.|+++++.+||+.+.+++.. -|++|.
T Consensus 283 i~~v~~-kE~~~~------g~fry~~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~ 351 (354)
T KOG0024|consen 283 IIDVAL-KEVDLR------GSFRYCNGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIIT 351 (354)
T ss_pred hhhhhh-heeeee------eeeeeccccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEe
Confidence 221111 222222 4455566799999999999987 56899999999999999999887753 377775
No 6
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=7.6e-47 Score=333.12 Aligned_cols=314 Identities=20% Similarity=0.238 Sum_probs=261.7
Q ss_pred cceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCcccc
Q psy9949 25 TRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLG 104 (383)
Q Consensus 25 ~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G 104 (383)
+.++|.++.++++| |+++ ++.+++|++|||+||+.++|+|++|..+.+|.. + ..+|.++|
T Consensus 1 mk~~aAV~~~~~~P--l~i~-ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~----------------p-~~~P~vLG 60 (366)
T COG1062 1 MKTRAAVAREAGKP--LEIE-EVDLDPPRAGEVLVRITATGVCHTDAHTLSGDD----------------P-EGFPAVLG 60 (366)
T ss_pred CCceEeeeecCCCC--eEEE-EEecCCCCCCeEEEEEEEeeccccchhhhcCCC----------------C-CCCceecc
Confidence 35789999998988 8899 899999999999999999999999999999972 2 34999999
Q ss_pred CceeEEEEecCCCCCCCCCCCEEEEeec-------------------------------------------CCCC--CCc
Q psy9949 105 RDFCGKIVAKGPRVTDLNIDDVVYGVIQ-------------------------------------------PHKQ--GSF 139 (383)
Q Consensus 105 ~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~-------------------------------------------~~~~--g~~ 139 (383)
||++|+|++||++|+++++||+|+.... .+.- ++|
T Consensus 61 HEgAGiVe~VG~gVt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stF 140 (366)
T COG1062 61 HEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTF 140 (366)
T ss_pred cccccEEEEecCCccccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccc
Confidence 9999999999999999999999974211 0112 499
Q ss_pred eEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEE
Q psy9949 140 SKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVT 218 (383)
Q Consensus 140 a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~ 218 (383)
++|.++++..++++++..+++.++++.|...|.+.++.+.+++ ++|++|.|+| .|++|+++||-|+..|+ ++|+
T Consensus 141 a~y~vv~~~s~vki~~~~p~~~a~llGCgV~TG~Gav~nta~v----~~G~tvaV~G-lGgVGlaaI~gA~~agA~~IiA 215 (366)
T COG1062 141 AEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKV----EPGDTVAVFG-LGGVGLAAIQGAKAAGAGRIIA 215 (366)
T ss_pred hhheeecccceEECCCCCCccceEEEeeeeccChHHhhhcccC----CCCCeEEEEe-ccHhHHHHHHHHHHcCCceEEE
Confidence 9999999999999999999999999999999999999999999 9999999999 99999999999999999 9999
Q ss_pred Ee-cCchHHHHHhcCCCeeeeCCCh-HHHHHHhcC--CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCC
Q psy9949 219 TC-SGDAKDLVTSLNPNLVIDYNEP-EAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNT 294 (383)
Q Consensus 219 ~~-~~~~~~~~~~lg~~~v~~~~~~-~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~ 294 (383)
++ .++++++++++|+++++|.++. +..+.+.+. +|+|++|||+|+.....++ +++.. ++|+.+.+|-+....
T Consensus 216 vD~~~~Kl~~A~~fGAT~~vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~a-l~~~~--~~G~~v~iGv~~~~~- 291 (366)
T COG1062 216 VDINPEKLELAKKFGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQA-LEATH--RGGTSVIIGVAGAGQ- 291 (366)
T ss_pred EeCCHHHHHHHHhcCCceeecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHH-HHHHh--cCCeEEEEecCCCCc-
Confidence 99 5678899999999999999887 577777664 4899999999999887776 88999 899999987532221
Q ss_pred CCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcc--cccceeecCCCHHHHHHHHhc
Q psy9949 295 DSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIK--PVIDSKYNFCELPTAFEKVQQ 372 (383)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~~~~~~~l~~~~~a~~~l~~ 372 (383)
....+.+++.. ...|+|+.+ +.. .-+.++..++++..+|+|. .++++.++|+|++|||+.|.+
T Consensus 292 -------~i~~~~~~lv~-----gr~~~Gs~~--G~~-~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~ 356 (366)
T COG1062 292 -------EISTRPFQLVT-----GRVWKGSAF--GGA-RPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHE 356 (366)
T ss_pred -------eeecChHHeec-----cceEEEEee--cCC-ccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhC
Confidence 11122222222 234444332 111 2367899999999999874 589999999999999999999
Q ss_pred CCCCCeEEEeC
Q psy9949 373 GHLRGKIILNA 383 (383)
Q Consensus 373 ~~~~gkvvl~~ 383 (383)
++.. |-||.+
T Consensus 357 G~~I-R~Vi~~ 366 (366)
T COG1062 357 GKSI-RSVIRF 366 (366)
T ss_pred Ccee-eEEecC
Confidence 9987 666654
No 7
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=1.1e-43 Score=337.44 Aligned_cols=313 Identities=21% Similarity=0.236 Sum_probs=250.1
Q ss_pred eeeEEEeecCC------CceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCC
Q psy9949 27 TAAWQISSYGG------ADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFP 100 (383)
Q Consensus 27 ~~a~~~~~~g~------~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p 100 (383)
|||+++.++|. ++.++++ +.+.|+|+++||+|||.++|||++|++.+.|.. ...+|
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~-~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~-----------------~~~~p 62 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIE-EVELDPPGPGEVLVKIAAAGLCHSDLSVINGDR-----------------PRPLP 62 (371)
T ss_pred CcceEEEecccccccccCCCceEE-EeecCCCCCCeEEEEEEEEeeCccchHhhcCCC-----------------CCCCC
Confidence 79999999876 3678898 899999999999999999999999999988751 13468
Q ss_pred ccccCceeEEEEecCCCCCCCCCCCEEEEeecC---------------------------------------------CC
Q psy9949 101 LTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQP---------------------------------------------HK 135 (383)
Q Consensus 101 ~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~---------------------------------------------~~ 135 (383)
.++|||++|+|+++|+++++|++||||++.... ..
T Consensus 63 ~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g 142 (371)
T cd08281 63 MALGHEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLG 142 (371)
T ss_pred ccCCccceeEEEEeCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccC
Confidence 999999999999999999999999999863110 00
Q ss_pred CCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-
Q psy9949 136 QGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI- 214 (383)
Q Consensus 136 ~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~- 214 (383)
.|+|+||++++.+.++++|+++++++|+.++++++|||+++...+++ +++++|+|+| +|++|++++|+|+.+|+
T Consensus 143 ~G~~aey~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i----~~g~~VlV~G-~G~vG~~a~~lak~~G~~ 217 (371)
T cd08281 143 VSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGV----RPGQSVAVVG-LGGVGLSALLGAVAAGAS 217 (371)
T ss_pred cccceeeEEecccceEECCCCCChHHhhhhcchHHHHHHHHHhccCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCC
Confidence 27999999999999999999999999999999999999998777888 9999999998 79999999999999999
Q ss_pred EEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcC--CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCc
Q psy9949 215 EVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFL 291 (383)
Q Consensus 215 ~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~ 291 (383)
+|++++++ ++.++++++|++.++++.+.++.+++.+. +++|++|||+|+......+ +++++ ++|+++.+|....
T Consensus 218 ~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~-~~~l~--~~G~iv~~G~~~~ 294 (371)
T cd08281 218 QVVAVDLNEDKLALARELGATATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETA-YEITR--RGGTTVTAGLPDP 294 (371)
T ss_pred cEEEEcCCHHHHHHHHHcCCceEeCCCchhHHHHHHHHhCCCCCEEEECCCChHHHHHH-HHHHh--cCCEEEEEccCCC
Confidence 69888854 56788999999999998887777777643 3799999999986554443 88999 9999999864311
Q ss_pred cCCCCCCCchhhhhhHHHHhhhhh-ccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHH
Q psy9949 292 KNTDSLGLVPGLVKNAFDLLKSNF-ESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFE 368 (383)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~ 368 (383)
.. .+.+....+ .++..+.|... ......++++++++++++|+++. +++++|+|+++++||+
T Consensus 295 ~~-------------~~~~~~~~~~~~~~~i~g~~~---~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~ 358 (371)
T cd08281 295 EA-------------RLSVPALSLVAEERTLKGSYM---GSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFD 358 (371)
T ss_pred Cc-------------eeeecHHHHhhcCCEEEEEec---CCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHH
Confidence 00 001111111 11222222110 00112578899999999999864 6789999999999999
Q ss_pred HHhcCCCCCeEEE
Q psy9949 369 KVQQGHLRGKIIL 381 (383)
Q Consensus 369 ~l~~~~~~gkvvl 381 (383)
.+.+++..||+|+
T Consensus 359 ~~~~~~~~~~vi~ 371 (371)
T cd08281 359 RLAAGEAVRQVIL 371 (371)
T ss_pred HHhCCCceeeeeC
Confidence 9999998877764
No 8
>KOG0022|consensus
Probab=100.00 E-value=5.8e-45 Score=315.90 Aligned_cols=317 Identities=19% Similarity=0.183 Sum_probs=261.9
Q ss_pred CcccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCc
Q psy9949 22 KYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPL 101 (383)
Q Consensus 22 ~~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~ 101 (383)
..+.++||++..+++.| |.++ ++.+++|+.+||+||+.++++|++|.+.+.|.. +...+|.
T Consensus 3 gkvI~CKAAV~w~a~~P--L~IE-ei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~----------------~~~~fP~ 63 (375)
T KOG0022|consen 3 GKVITCKAAVAWEAGKP--LVIE-EIEVAPPKAHEVRIKILATGVCHTDAYVWSGKD----------------PEGLFPV 63 (375)
T ss_pred CCceEEeEeeeccCCCC--eeEE-EEEeCCCCCceEEEEEEEEeeccccceeecCCC----------------ccccCce
Confidence 34678999999999988 8899 899999999999999999999999999999872 3467899
Q ss_pred cccCceeEEEEecCCCCCCCCCCCEEEEeec--------------------------------------------CCCC-
Q psy9949 102 TLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQ--------------------------------------------PHKQ- 136 (383)
Q Consensus 102 ~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~--------------------------------------------~~~~- 136 (383)
++|||++|+|+++|++|+++++||+|+.+.. .+..
T Consensus 64 IlGHEaaGIVESvGegV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg 143 (375)
T KOG0022|consen 64 ILGHEAAGIVESVGEGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMG 143 (375)
T ss_pred EecccceeEEEEecCCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecc
Confidence 9999999999999999999999999974311 0112
Q ss_pred -CCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-
Q psy9949 137 -GSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI- 214 (383)
Q Consensus 137 -g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~- 214 (383)
.+|+||.+++...++++++..+++.++.+.|...|+|.+..+.+++ ++|++|.|+| -|++|+++++-||+.||
T Consensus 144 ~StFsEYTVv~~~~v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv----~~GstvAVfG-LG~VGLav~~Gaka~GAs 218 (375)
T KOG0022|consen 144 TSTFSEYTVVDDISVAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKV----EPGSTVAVFG-LGGVGLAVAMGAKAAGAS 218 (375)
T ss_pred cccceeEEEeecceeEecCCCCChhheeEeeccccccchhhhhhccc----CCCCEEEEEe-cchHHHHHHHhHHhcCcc
Confidence 3999999999999999999999999999999999999999999999 9999999999 99999999999999999
Q ss_pred EEEEEe-cCchHHHHHhcCCCeeeeCCC--hHHHHHHhcC--CCccEEEEcCCCCcccccccccccccCCCceEEEecCC
Q psy9949 215 EVVTTC-SGDAKDLVTSLNPNLVIDYNE--PEAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSP 289 (383)
Q Consensus 215 ~Vi~~~-~~~~~~~~~~lg~~~v~~~~~--~~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~ 289 (383)
++|+++ .+++++.++++|++.++|+.+ ....+.+.+. +|+|+-|||+|......+++..+-. -.|+-|.+|-.
T Consensus 219 rIIgvDiN~~Kf~~ak~fGaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~--GwG~sv~iGv~ 296 (375)
T KOG0022|consen 219 RIIGVDINPDKFEKAKEFGATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHK--GWGKSVVIGVA 296 (375)
T ss_pred cEEEEecCHHHHHHHHhcCcceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhc--CCCeEEEEEec
Confidence 999999 677899999999999998874 2355666664 6899999999999988877334444 44888888642
Q ss_pred CccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcC--CHHHHHHHHHHHHcCCc--ccccceeecCCCHHH
Q psy9949 290 FLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMP--IPYAVKEINKFIERGQI--KPVIDSKYNFCELPT 365 (383)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~g~l--~~~~~~~~~l~~~~~ 365 (383)
... ..+++...++.+...|+|. .+.. .++++..+++...++++ ...++|++||+++++
T Consensus 297 ~~~-------------~~i~~~p~~l~~GR~~~Gs-----~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~ 358 (375)
T KOG0022|consen 297 AAG-------------QEISTRPFQLVTGRTWKGS-----AFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINK 358 (375)
T ss_pred CCC-------------cccccchhhhccccEEEEE-----ecccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHH
Confidence 111 1223333333224444443 3332 47788889988888876 568999999999999
Q ss_pred HHHHHhcCCCCCeEEEeC
Q psy9949 366 AFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 366 a~~~l~~~~~~gkvvl~~ 383 (383)
||++|.+++.. |-||.|
T Consensus 359 AF~ll~~Gksi-R~vl~~ 375 (375)
T KOG0022|consen 359 AFDLLHEGKSI-RCVLWM 375 (375)
T ss_pred HHHHHhCCceE-EEEEeC
Confidence 99999999987 888765
No 9
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=2.5e-43 Score=332.95 Aligned_cols=315 Identities=20% Similarity=0.289 Sum_probs=244.8
Q ss_pred ccCCCcccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCC
Q psy9949 18 INHLKYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVL 97 (383)
Q Consensus 18 ~~~~~~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~ 97 (383)
++...-|+.++++......+ .+.+. +++.|+++++||+|||.++|||++|++.+.|.. ...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~--~l~~~-~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~----------------~~~ 64 (360)
T PLN02586 4 SPEEEHPQKAFGWAARDPSG--VLSPF-HFSRRENGDEDVTVKILYCGVCHSDLHTIKNEW----------------GFT 64 (360)
T ss_pred ChhhhchhheeEEEecCCCC--CceEE-eecCCCCCCCeEEEEEEEecCChhhHhhhcCCc----------------CCC
Confidence 45555677788888765543 46777 788999999999999999999999999887751 123
Q ss_pred CCCccccCceeEEEEecCCCCCCCCCCCEEEEe-----ec---------------------------CCCCCCceEEEee
Q psy9949 98 EFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGV-----IQ---------------------------PHKQGSFSKLILA 145 (383)
Q Consensus 98 ~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~-----~~---------------------------~~~~g~~a~~~~v 145 (383)
.+|.++|||++|+|+++|+++++|++||||+.. |+ ...+|+|+||+++
T Consensus 65 ~~p~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v 144 (360)
T PLN02586 65 RYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVV 144 (360)
T ss_pred CCCccCCcceeEEEEEECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEE
Confidence 468899999999999999999999999999742 11 1125999999999
Q ss_pred cCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-ch
Q psy9949 146 DSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DA 224 (383)
Q Consensus 146 ~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~ 224 (383)
|.+.++++|+++++++++++++++.|||+++.....+ +++++|+|.| +|++|++++|+|+.+|++|++++.+ ++
T Consensus 145 ~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~----~~g~~VlV~G-~G~vG~~avq~Ak~~Ga~vi~~~~~~~~ 219 (360)
T PLN02586 145 DQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMT----EPGKHLGVAG-LGGLGHVAVKIGKAFGLKVTVISSSSNK 219 (360)
T ss_pred chHHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhccc----CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcch
Confidence 9999999999999999999999999999999766666 7999999987 7999999999999999998888744 33
Q ss_pred -HHHHHhcCCCeeeeCCChHHHHHHhcC-CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchh
Q psy9949 225 -KDLVTSLNPNLVIDYNEPEAMHSIAGA-GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPG 302 (383)
Q Consensus 225 -~~~~~~lg~~~v~~~~~~~~~~~i~~~-~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~ 302 (383)
.+.++++|++.++++.+.+ .+.+. +++|++||++|.......+ +++++ ++|+++.+|... +
T Consensus 220 ~~~~~~~~Ga~~vi~~~~~~---~~~~~~~~~D~vid~~g~~~~~~~~-~~~l~--~~G~iv~vG~~~-----------~ 282 (360)
T PLN02586 220 EDEAINRLGADSFLVSTDPE---KMKAAIGTMDYIIDTVSAVHALGPL-LGLLK--VNGKLITLGLPE-----------K 282 (360)
T ss_pred hhhHHHhCCCcEEEcCCCHH---HHHhhcCCCCEEEECCCCHHHHHHH-HHHhc--CCcEEEEeCCCC-----------C
Confidence 4566889999998876532 23222 4799999999976543333 88999 999999986421 0
Q ss_pred hhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949 303 LVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382 (383)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~ 382 (383)
.. .+++.. + ..+... ..+....+.++++++++++++|++++.+ ++|+|+++++||+.+.+++..||+||+
T Consensus 283 ~~--~~~~~~--~----~~~~~~-i~g~~~~~~~~~~~~~~li~~g~i~~~~-~~~~l~~~~~A~~~~~~~~~~gkvvi~ 352 (360)
T PLN02586 283 PL--ELPIFP--L----VLGRKL-VGGSDIGGIKETQEMLDFCAKHNITADI-ELIRMDEINTAMERLAKSDVRYRFVID 352 (360)
T ss_pred CC--ccCHHH--H----HhCCeE-EEEcCcCCHHHHHHHHHHHHhCCCCCcE-EEEeHHHHHHHHHHHHcCCCcEEEEEE
Confidence 00 011111 1 111111 1233334567899999999999998766 589999999999999999988999987
Q ss_pred C
Q psy9949 383 A 383 (383)
Q Consensus 383 ~ 383 (383)
+
T Consensus 353 ~ 353 (360)
T PLN02586 353 V 353 (360)
T ss_pred c
Confidence 4
No 10
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=1e-42 Score=329.17 Aligned_cols=313 Identities=18% Similarity=0.204 Sum_probs=248.1
Q ss_pred ceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949 26 RTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR 105 (383)
Q Consensus 26 ~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~ 105 (383)
+||++++.+++++ ++++ +.+.|+|+++||+|||.++|||++|++...|. ....+|.++||
T Consensus 1 ~mka~~~~~~~~~--~~~~-~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~-----------------~~~~~p~i~G~ 60 (358)
T TIGR03451 1 TVRGVIARSKGAP--VELE-TIVVPDPGPGEVIVDIQACGVCHTDLHYREGG-----------------INDEFPFLLGH 60 (358)
T ss_pred CcEEEEEccCCCC--CEEE-EEECCCCCCCeEEEEEEEEeecHHHHHHhcCC-----------------ccccCCccccc
Confidence 6999999998876 6778 89999999999999999999999999988875 11346889999
Q ss_pred ceeEEEEecCCCCCCCCCCCEEEEeec------------------C-------------------CCCCCceEEEeecCc
Q psy9949 106 DFCGKIVAKGPRVTDLNIDDVVYGVIQ------------------P-------------------HKQGSFSKLILADSA 148 (383)
Q Consensus 106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~------------------~-------------------~~~g~~a~~~~v~~~ 148 (383)
|++|+|+++|+++++|++||||++... . ..+|+|+||+.++.+
T Consensus 61 e~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~ 140 (358)
T TIGR03451 61 EAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAG 140 (358)
T ss_pred ceEEEEEEeCCCCcccCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehh
Confidence 999999999999999999999986210 0 124899999999999
Q ss_pred ccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHH
Q psy9949 149 LVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKD 226 (383)
Q Consensus 149 ~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~ 226 (383)
.++++|+++++++|+.+++.+.|||+++...+++ +++++|+|+| +|++|++++|+|+.+|+ +|++++++ ++.+
T Consensus 141 ~~~~ip~~~~~~~aa~l~~~~~ta~~~~~~~~~~----~~g~~VlV~G-~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~ 215 (358)
T TIGR03451 141 QCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGV----KRGDSVAVIG-CGGVGDAAIAGAALAGASKIIAVDIDDRKLE 215 (358)
T ss_pred heEECCCCCChhHhhhhcccchhhHHHHHhccCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence 9999999999999999999999999988777788 9999999998 69999999999999999 58888754 5778
Q ss_pred HHHhcCCCeeeeCCChHHHHHHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhh
Q psy9949 227 LVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGL 303 (383)
Q Consensus 227 ~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~ 303 (383)
+++++|++.++++.+.++.+.+.+. .++|++|||+|++.....+ +++++ ++|+++.+|.+.... ..
T Consensus 216 ~~~~~Ga~~~i~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~-~~~~~--~~G~iv~~G~~~~~~--------~~ 284 (358)
T TIGR03451 216 WAREFGATHTVNSSGTDPVEAIRALTGGFGADVVIDAVGRPETYKQA-FYARD--LAGTVVLVGVPTPDM--------TL 284 (358)
T ss_pred HHHHcCCceEEcCCCcCHHHHHHHHhCCCCCCEEEECCCCHHHHHHH-HHHhc--cCCEEEEECCCCCCc--------ee
Confidence 8999999999998877777666543 4799999999986554443 88889 999999986431100 00
Q ss_pred hhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcCCCCCeEEE
Q psy9949 304 VKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQGHLRGKIIL 381 (383)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~~~~gkvvl 381 (383)
......+.. ++..+++.. .......++++++++++++|++++ +++++||++++++|++.+.+++.. |+++
T Consensus 285 ~~~~~~~~~----~~~~i~~~~---~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~ 356 (358)
T TIGR03451 285 ELPLLDVFG----RGGALKSSW---YGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVV 356 (358)
T ss_pred eccHHHHhh----cCCEEEEee---cCCCCcHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEE
Confidence 000011111 122222211 001123678999999999999865 679999999999999999888775 7777
Q ss_pred e
Q psy9949 382 N 382 (383)
Q Consensus 382 ~ 382 (383)
.
T Consensus 357 ~ 357 (358)
T TIGR03451 357 E 357 (358)
T ss_pred e
Confidence 5
No 11
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=2.2e-42 Score=329.36 Aligned_cols=319 Identities=17% Similarity=0.145 Sum_probs=249.9
Q ss_pred CCCcccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCC
Q psy9949 20 HLKYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEF 99 (383)
Q Consensus 20 ~~~~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 99 (383)
++..|.+||++++.+++++ +.++ +.+.|+|+++||+|||.++|||++|++.+.|..+ ....+
T Consensus 4 ~~~~~~~mka~~~~~~~~~--~~~~-e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~---------------~~~~~ 65 (381)
T PLN02740 4 TQGKVITCKAAVAWGPGEP--LVME-EIRVDPPQKMEVRIKILYTSICHTDLSAWKGENE---------------AQRAY 65 (381)
T ss_pred ccccceeeEEEEEecCCCC--cEEE-EeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCc---------------ccCCC
Confidence 3446778999999987754 6777 8999999999999999999999999999887511 12356
Q ss_pred CccccCceeEEEEecCCCCCCCCCCCEEEEeecC----------------------------------------------
Q psy9949 100 PLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQP---------------------------------------------- 133 (383)
Q Consensus 100 p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~---------------------------------------------- 133 (383)
|.++|||++|+|+++|+++++|++||||++....
T Consensus 66 p~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 145 (381)
T PLN02740 66 PRILGHEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIY 145 (381)
T ss_pred CccccccceEEEEEeCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCccc
Confidence 8999999999999999999999999999864210
Q ss_pred --CCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHH
Q psy9949 134 --HKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKA 211 (383)
Q Consensus 134 --~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~ 211 (383)
..+|+|+||++++.+.++++|+++++++++.+++++.|||+++...+++ +++++|+|+| +|++|++++|+|+.
T Consensus 146 ~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~----~~g~~VlV~G-~G~vG~~a~q~ak~ 220 (381)
T PLN02740 146 HFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANV----QAGSSVAIFG-LGAVGLAVAEGARA 220 (381)
T ss_pred ccccCccceeEEEEehHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCC----CCCCEEEEEC-CCHHHHHHHHHHHH
Confidence 0158999999999999999999999999999999999999998767888 9999999998 69999999999999
Q ss_pred CCC-EEEEEec-CchHHHHHhcCCCeeeeCCCh--HHHHHHhcC--CCccEEEEcCCCCcccccccccccccCCC-ceEE
Q psy9949 212 WDI-EVVTTCS-GDAKDLVTSLNPNLVIDYNEP--EAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKF-SKFV 284 (383)
Q Consensus 212 ~G~-~Vi~~~~-~~~~~~~~~lg~~~v~~~~~~--~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~-G~~v 284 (383)
+|+ +|+++++ +++.++++++|++.++++.+. ++.+++.+. +++|++||++|++.....+ +++++ ++ |+++
T Consensus 221 ~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a-~~~~~--~g~G~~v 297 (381)
T PLN02740 221 RGASKIIGVDINPEKFEKGKEMGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREA-FLSTH--DGWGLTV 297 (381)
T ss_pred CCCCcEEEEcCChHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHH-HHhhh--cCCCEEE
Confidence 999 6998884 467889999999999887753 366655542 3799999999987654443 78888 86 9999
Q ss_pred EecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEc--CCHHHHHHHHHHHHcCCccc--ccceeecC
Q psy9949 285 TLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFM--PIPYAVKEINKFIERGQIKP--VIDSKYNF 360 (383)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~g~l~~--~~~~~~~l 360 (383)
.+|.+... . .+.+....+ .++..+...... ....++.++++++.+|+++. +++++|+|
T Consensus 298 ~~G~~~~~-----------~--~~~~~~~~~-----~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l 359 (381)
T PLN02740 298 LLGIHPTP-----------K--MLPLHPMEL-----FDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPF 359 (381)
T ss_pred EEccCCCC-----------c--eecccHHHH-----hcCCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecH
Confidence 98643100 0 011111111 111222111111 12467899999999998754 67899999
Q ss_pred CCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 361 CELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 361 ~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
+++++|++.+.+++. .|++|++
T Consensus 360 ~e~~~A~~~~~~~~~-~k~~~~~ 381 (381)
T PLN02740 360 EKINEAFQLLEDGKA-LRCLLHL 381 (381)
T ss_pred HHHHHHHHHHHCCCc-eeEEEeC
Confidence 999999999988876 4999874
No 12
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=4.6e-42 Score=322.93 Aligned_cols=306 Identities=20% Similarity=0.278 Sum_probs=235.4
Q ss_pred ceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhc-cCCcchhhhhhcccccCCCCCCCCCcccc
Q psy9949 26 RTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLG-GYGNVVLNSLRQLETCSVEPVLEFPLTLG 104 (383)
Q Consensus 26 ~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~p~~~G 104 (383)
.++++++..+++ ++++ +.+.| ++++||||||.++|||++|++++. |..+ .....+|.++|
T Consensus 4 ~~~~~~~~~~~~---~~~~-~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~--------------~~~~~~p~v~G 64 (343)
T PRK09880 4 KTQSCVVAGKKD---VAVT-EQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVG--------------NFVIKAPMVLG 64 (343)
T ss_pred cceEEEEecCCc---eEEE-ecCCC-CCCCeEEEEEEEEEECccccHhhccCCcc--------------cccccCCcccC
Confidence 578899886554 6788 78887 689999999999999999999875 3310 01235689999
Q ss_pred CceeEEEEecCCCCCCCCCCCEEEEee------------------------c-----CCCCCCceEEEeecCcccccCCC
Q psy9949 105 RDFCGKIVAKGPRVTDLNIDDVVYGVI------------------------Q-----PHKQGSFSKLILADSALVHKKPS 155 (383)
Q Consensus 105 ~e~~G~Vv~vG~~v~~~~~Gd~V~~~~------------------------~-----~~~~g~~a~~~~v~~~~~~~ip~ 155 (383)
||++|+|+++ ++++|++||||+... + ...+|+|+||++++.+.++++|+
T Consensus 65 hE~~G~V~~v--~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~ 142 (343)
T PRK09880 65 HEVIGKIVHS--DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPE 142 (343)
T ss_pred cccEEEEEEe--cCccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCC
Confidence 9999999999 788999999998531 0 01369999999999999999999
Q ss_pred CCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEe-cCchHHHHHhcCC
Q psy9949 156 NISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTC-SGDAKDLVTSLNP 233 (383)
Q Consensus 156 ~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~-~~~~~~~~~~lg~ 233 (383)
++++++++.. .++.+||+++.+ ... .++++|+|+| +|++|++++|+|+.+|+ +|++++ +++++++++++|+
T Consensus 143 ~l~~~~aa~~-~~~~~a~~al~~-~~~----~~g~~VlV~G-~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa 215 (343)
T PRK09880 143 KADEKVMAFA-EPLAVAIHAAHQ-AGD----LQGKRVFVSG-VGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGA 215 (343)
T ss_pred CCCHHHHHhh-cHHHHHHHHHHh-cCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCC
Confidence 9999876644 466789999974 444 6899999998 69999999999999999 688887 4567889999999
Q ss_pred CeeeeCCChHHHHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhh
Q psy9949 234 NLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKS 313 (383)
Q Consensus 234 ~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (383)
+.++++++.++.+.....+++|++||++|++.....+ +++++ ++|+++.+|... +. ..+++..
T Consensus 216 ~~vi~~~~~~~~~~~~~~g~~D~vid~~G~~~~~~~~-~~~l~--~~G~iv~~G~~~-----------~~--~~~~~~~- 278 (343)
T PRK09880 216 DKLVNPQNDDLDHYKAEKGYFDVSFEVSGHPSSINTC-LEVTR--AKGVMVQVGMGG-----------AP--PEFPMMT- 278 (343)
T ss_pred cEEecCCcccHHHHhccCCCCCEEEECCCCHHHHHHH-HHHhh--cCCEEEEEccCC-----------CC--CccCHHH-
Confidence 9999988766654333334699999999987544343 89999 999999996421 00 0111111
Q ss_pred hhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 314 NFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
+ ..++..+. +... ..++++++++++++|++++ +++++|+++++++|++.+.+++..||++|.+
T Consensus 279 -~----~~k~~~i~-g~~~-~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 279 -L----IVKEISLK-GSFR-FTEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred -H----HhCCcEEE-EEee-ccccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 1 11222221 1111 2467899999999999875 6789999999999999999888789999864
No 13
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=5.7e-42 Score=325.00 Aligned_cols=313 Identities=18% Similarity=0.177 Sum_probs=243.6
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
||++++...+++ ++++ +.|.|+|+++||+|||.++|||++|++...|.. ....+|.++|||
T Consensus 2 ~~a~~~~~~~~~--l~~~-~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~----------------~~~~~p~i~GhE 62 (368)
T TIGR02818 2 SRAAVAWAAGQP--LKIE-EVDVEMPQKGEVLVRIVATGVCHTDAFTLSGAD----------------PEGVFPVILGHE 62 (368)
T ss_pred ceEEEEecCCCC--eEEE-EecCCCCCCCeEEEEEEEecccHHHHHHhcCCC----------------CCCCCCeeeccc
Confidence 789998877654 7788 899999999999999999999999999988751 123568999999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeecC---------------------------------------------CCCCCceE
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQP---------------------------------------------HKQGSFSK 141 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~---------------------------------------------~~~g~~a~ 141 (383)
++|+|+++|+++++|++||||++.... ...|+|+|
T Consensus 63 ~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~ae 142 (368)
T TIGR02818 63 GAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSE 142 (368)
T ss_pred cEEEEEEECCCCccCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCcccee
Confidence 999999999999999999999864210 01369999
Q ss_pred EEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEe
Q psy9949 142 LILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTC 220 (383)
Q Consensus 142 ~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~ 220 (383)
|+++|.+.++++|+++++++++.+++++.|||+++.+.+++ +++++|+|+| +|++|++++|+|+.+|+ +|++++
T Consensus 143 y~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~a~~~~~~~----~~g~~VlV~G-~G~iG~~a~q~Ak~~G~~~Vi~~~ 217 (368)
T TIGR02818 143 YTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKV----EEGDTVAVFG-LGGIGLSVIQGARMAKASRIIAID 217 (368)
T ss_pred eEEechhheEECCCCCCHHHhhhhcchhHHHHHHHHHhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEc
Confidence 99999999999999999999999999999999999777888 9999999998 69999999999999999 799988
Q ss_pred c-CchHHHHHhcCCCeeeeCCC--hHHHHHHhcC--CCccEEEEcCCCCcccccccccccccCCC-ceEEEecCCCccCC
Q psy9949 221 S-GDAKDLVTSLNPNLVIDYNE--PEAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKF-SKFVTLRSPFLKNT 294 (383)
Q Consensus 221 ~-~~~~~~~~~lg~~~v~~~~~--~~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~-G~~v~~~~~~~~~~ 294 (383)
+ .+++++++++|++.++++++ .++.+.+.+. +++|++||++|++.....+ +++++ ++ |+++.+|.+....
T Consensus 218 ~~~~~~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~-~~~~~--~~~G~~v~~g~~~~~~- 293 (368)
T TIGR02818 218 INPAKFELAKKLGATDCVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAA-LECCH--KGWGESIIIGVAGAGQ- 293 (368)
T ss_pred CCHHHHHHHHHhCCCeEEcccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHH-HHHhh--cCCCeEEEEeccCCCC-
Confidence 4 45778899999999988764 3455555432 3799999999986654443 88887 75 9999986431100
Q ss_pred CCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcc--cccceeecCCCHHHHHHHHhc
Q psy9949 295 DSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIK--PVIDSKYNFCELPTAFEKVQQ 372 (383)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~~~~~~~l~~~~~a~~~l~~ 372 (383)
.+.+....+.....+.+.. ........+++++++++++|+++ ++++++|+|+++++|++.+.+
T Consensus 294 ------------~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~ 358 (368)
T TIGR02818 294 ------------EISTRPFQLVTGRVWRGSA---FGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHE 358 (368)
T ss_pred ------------cccccHHHHhccceEEEee---ccCCCcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhC
Confidence 0011011110011111111 00012356789999999999875 568999999999999999987
Q ss_pred CCCCCeEEEeC
Q psy9949 373 GHLRGKIILNA 383 (383)
Q Consensus 373 ~~~~gkvvl~~ 383 (383)
++. .|++|++
T Consensus 359 ~~~-~k~~v~~ 368 (368)
T TIGR02818 359 GKS-IRTVIHY 368 (368)
T ss_pred CCc-eeEEeeC
Confidence 765 6999874
No 14
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=8.3e-42 Score=320.95 Aligned_cols=307 Identities=20% Similarity=0.279 Sum_probs=244.5
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
|||+++.+++ .++++ +.+.|+++++||+||+.+++||++|++.+.+... ....+|.++|||
T Consensus 1 mka~~~~~~~---~l~~~-~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~---------------~~~~~p~i~G~e 61 (339)
T cd08239 1 MRGAVFPGDR---TVELR-EFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHR---------------APAYQGVIPGHE 61 (339)
T ss_pred CeEEEEecCC---ceEEE-ecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCC---------------ccCCCCceeccC
Confidence 7899998643 47888 8999999999999999999999999998766410 112357899999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeec-------------------------CCCCCCceEEEeecCcccccCCCCCCHHH
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQ-------------------------PHKQGSFSKLILADSALVHKKPSNISDEE 161 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~-------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~ 161 (383)
++|+|+++|++++.|++||+|+.+.. ...+|+|+||++++.+.++++|+++++++
T Consensus 62 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~ 141 (339)
T cd08239 62 PAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFAD 141 (339)
T ss_pred ceEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHH
Confidence 99999999999999999999987531 12359999999999999999999999999
Q ss_pred HHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecC-chHHHHHhcCCCeeeeC
Q psy9949 162 AAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTCSG-DAKDLVTSLNPNLVIDY 239 (383)
Q Consensus 162 aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~~-~~~~~~~~lg~~~v~~~ 239 (383)
|+.+++++.|||+++. ...+ +++++|+|+| +|++|++++|+|+.+|++ |++++++ ++.++++++|++.++++
T Consensus 142 aa~l~~~~~ta~~~l~-~~~~----~~g~~vlV~G-~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~ 215 (339)
T cd08239 142 GALLLCGIGTAYHALR-RVGV----SGRDTVLVVG-AGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINS 215 (339)
T ss_pred hhhhcchHHHHHHHHH-hcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcC
Confidence 9999999999999996 5667 8999999998 699999999999999997 9998754 56788899999999988
Q ss_pred CChHHHHHHhc---CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhc
Q psy9949 240 NEPEAMHSIAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFE 316 (383)
Q Consensus 240 ~~~~~~~~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (383)
++.+ .+.+.+ ..++|++||++|+......+ +++++ ++|+++.+|..... . +......
T Consensus 216 ~~~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~-~~~l~--~~G~~v~~g~~~~~-----~---------~~~~~~~-- 275 (339)
T cd08239 216 GQDD-VQEIRELTSGAGADVAIECSGNTAARRLA-LEAVR--PWGRLVLVGEGGEL-----T---------IEVSNDL-- 275 (339)
T ss_pred Ccch-HHHHHHHhCCCCCCEEEECCCCHHHHHHH-HHHhh--cCCEEEEEcCCCCc-----c---------cCcHHHH--
Confidence 7765 555543 24799999999988663333 88999 99999998642100 0 0000001
Q ss_pred cccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcc--cccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 317 SGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIK--PVIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
..++..+. +......++++++++++++|+++ ++++++|+++++++||+.+.+++ .||+||++
T Consensus 276 ---~~~~~~i~-g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~ 339 (339)
T cd08239 276 ---IRKQRTLI-GSWYFSVPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF 339 (339)
T ss_pred ---HhCCCEEE-EEecCCHHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence 11222221 23333567899999999999886 47789999999999999998875 69999874
No 15
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.1e-41 Score=322.83 Aligned_cols=308 Identities=19% Similarity=0.297 Sum_probs=238.9
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
+||+.+...+.+..+.+. +++.|+|+++||+|||.++|||++|++.+.|.. ....+|.++|||
T Consensus 5 ~~a~~~~~~~~~~~l~~~-~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~----------------~~~~~p~i~GhE 67 (375)
T PLN02178 5 NKAFGWAANDESGVLSPF-HFSRRENGENDVTVKILFCGVCHSDLHTIKNHW----------------GFSRYPIIPGHE 67 (375)
T ss_pred ceeEEEEEccCCCCceEE-eecCCCCCCCeEEEEEEEEcCchHHHHHhcCCC----------------CCCCCCcccCce
Confidence 445555555555557777 788899999999999999999999999988751 113468899999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEe-----ec---------------------------CCCCCCceEEEeecCcccccCC
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGV-----IQ---------------------------PHKQGSFSKLILADSALVHKKP 154 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~-----~~---------------------------~~~~g~~a~~~~v~~~~~~~ip 154 (383)
++|+|+++|+++++|++||||... |+ ...+|+|+||+++|.+.++++|
T Consensus 68 ~aG~Vv~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP 147 (375)
T PLN02178 68 IVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIP 147 (375)
T ss_pred eeEEEEEECCCCCccCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECC
Confidence 999999999999999999999742 21 1125999999999999999999
Q ss_pred CCCCHHHHHhhhHHHHHHHHHHHHhhh-cCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-ch-HHHHHhc
Q psy9949 155 SNISDEEAAGVLYTGLTAWSALQITAA-LGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DA-KDLVTSL 231 (383)
Q Consensus 155 ~~~~~~~aa~l~~~~~tA~~~l~~~~~-~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~-~~~~~~l 231 (383)
++++++++++++++++|||+++..... . +++++|+|.| +|++|++++|+|+.+|++|++++++ ++ .++++++
T Consensus 148 ~~ls~~~aa~l~~~~~ta~~al~~~~~~~----~~g~~VlV~G-~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~l 222 (375)
T PLN02178 148 DGLPSDSGAPLLCAGITVYSPMKYYGMTK----ESGKRLGVNG-LGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRL 222 (375)
T ss_pred CCCCHHHcchhhccchHHHHHHHHhCCCC----CCCCEEEEEc-ccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhC
Confidence 999999999999999999999864432 2 5899999998 6999999999999999999988854 33 5778899
Q ss_pred CCCeeeeCCChHHHHHHhcC-CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHH
Q psy9949 232 NPNLVIDYNEPEAMHSIAGA-GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDL 310 (383)
Q Consensus 232 g~~~v~~~~~~~~~~~i~~~-~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (383)
|+++++++.+. +++.+. +++|++|||+|.......+ +++++ ++|+++.+|.+. +.. .+++
T Consensus 223 Ga~~~i~~~~~---~~v~~~~~~~D~vid~~G~~~~~~~~-~~~l~--~~G~iv~vG~~~-----------~~~--~~~~ 283 (375)
T PLN02178 223 GADSFLVTTDS---QKMKEAVGTMDFIIDTVSAEHALLPL-FSLLK--VSGKLVALGLPE-----------KPL--DLPI 283 (375)
T ss_pred CCcEEEcCcCH---HHHHHhhCCCcEEEECCCcHHHHHHH-HHhhc--CCCEEEEEccCC-----------CCC--ccCH
Confidence 99999887653 233322 4799999999987543333 88999 999999986421 000 0111
Q ss_pred hhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 311 LKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
.. + ..++..+ .+......+++.++++++++|++++.+ ++|||+++++||+.+.+++..||+|+++
T Consensus 284 ~~--~----~~~~~~i-~g~~~~~~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 284 FP--L----VLGRKMV-GGSQIGGMKETQEMLEFCAKHKIVSDI-ELIKMSDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred HH--H----HhCCeEE-EEeCccCHHHHHHHHHHHHhCCCcccE-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence 11 1 1122222 233334567899999999999998776 5799999999999999999889999874
No 16
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=5.1e-42 Score=320.35 Aligned_cols=315 Identities=22% Similarity=0.258 Sum_probs=245.9
Q ss_pred eeeEEEeecCCC---ceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccc
Q psy9949 27 TAAWQISSYGGA---DELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTL 103 (383)
Q Consensus 27 ~~a~~~~~~g~~---~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~ 103 (383)
||++++.++++| +.++++ +.|.|+|+++||+||+.++|+|++|++...|..+ ....+|.++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~-~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~---------------~~~~~p~v~ 64 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLP-EPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYG---------------STKALPVPP 64 (324)
T ss_pred CeEEEEeecCCCccccEEEec-ccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCC---------------CCCCCCcCC
Confidence 789999998876 578888 8999999999999999999999999998887511 123467899
Q ss_pred cCceeEEEEecCCCCCC-CCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhc
Q psy9949 104 GRDFCGKIVAKGPRVTD-LNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAAL 182 (383)
Q Consensus 104 G~e~~G~Vv~vG~~v~~-~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~ 182 (383)
|||++|+|+++|+++++ |++||+|+++... +|+|++|+++|.+.++++|+++++++++.+++.++|||..+ ....+
T Consensus 65 G~e~~G~V~~vG~~v~~~~~vGd~V~~~~~~--~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~-~~~~~ 141 (324)
T cd08291 65 GFEGSGTVVAAGGGPLAQSLIGKRVAFLAGS--YGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGML-ETARE 141 (324)
T ss_pred CcceEEEEEEECCCccccCCCCCEEEecCCC--CCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHH-Hhhcc
Confidence 99999999999999996 9999999987531 49999999999999999999999999999888899998554 34543
Q ss_pred CccCCCCCEEEEE-cCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcC---CCccEE
Q psy9949 183 GLVYPRDKRVLVL-GASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVI 257 (383)
Q Consensus 183 ~~~~~~~~~VlI~-ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v 257 (383)
++++++|+ +|+|++|++++|+|+.+|++|++++++ ++.++++++|++++++++..++.+++.+. .++|++
T Consensus 142 -----~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~v 216 (324)
T cd08291 142 -----EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIF 216 (324)
T ss_pred -----CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEECCCccHHHHHHHHhCCCCCcEE
Confidence 45556665 789999999999999999999998855 56788899999999998887887776543 479999
Q ss_pred EEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHH
Q psy9949 258 LDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYA 337 (383)
Q Consensus 258 ~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (383)
||++|+...... +++++ ++|+++.+|....... ... ....+.. +...+.+............+.
T Consensus 217 id~~g~~~~~~~--~~~l~--~~G~~v~~g~~~~~~~-------~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 280 (324)
T cd08291 217 FDAVGGGLTGQI--LLAMP--YGSTLYVYGYLSGKLD-------EPI-DPVDLIF----KNKSIEGFWLTTWLQKLGPEV 280 (324)
T ss_pred EECCCcHHHHHH--HHhhC--CCCEEEEEEecCCCCc-------ccC-CHHHHhh----cCcEEEEEEHHHhhcccCHHH
Confidence 999998776555 88999 9999999864211100 000 0001111 111222211100001123567
Q ss_pred HHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949 338 VKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382 (383)
Q Consensus 338 ~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~ 382 (383)
++++.++++ +.+++.++++|+|+++++|++.+.+++..||++|.
T Consensus 281 ~~~~~~~~~-~~~~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 281 VKKLKKLVK-TELKTTFASRYPLALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred HHHHHHHHh-CccccceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence 889999998 99999999999999999999999999999999873
No 17
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=1.9e-41 Score=316.42 Aligned_cols=300 Identities=19% Similarity=0.262 Sum_probs=238.5
Q ss_pred eEEEeecCCC--ceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 29 AWQISSYGGA--DELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 29 a~~~~~~g~~--~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
|+.+.++|.+ ..++++ +.|.|+|+++||+|||.++|||++|++...|.. +...+|.++|||
T Consensus 1 ~~~~~~~g~~~~~~l~~~-~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~----------------~~~~~p~i~G~e 63 (329)
T TIGR02822 1 AWEVERPGPIEDGPLRFV-ERPVPRPGPGELLVRVRACGVCRTDLHVSEGDL----------------PVHRPRVTPGHE 63 (329)
T ss_pred CeeeecCCcCCCCCceEE-eCCCCCCCCCeEEEEEEEEeecchhHHHHcCCC----------------CCCCCCccCCcc
Confidence 3566677765 468899 899999999999999999999999999988751 112347899999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEe-----ec--------------------CCCCCCceEEEeecCcccccCCCCCCHHH
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGV-----IQ--------------------PHKQGSFSKLILADSALVHKKPSNISDEE 161 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~-----~~--------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~ 161 (383)
++|+|+++|+++++|++||+|+.. |. ...+|+|+||+.++.+.++++|+++++++
T Consensus 64 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~ 143 (329)
T TIGR02822 64 VVGEVAGRGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVE 143 (329)
T ss_pred eEEEEEEECCCCcccCCCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHH
Confidence 999999999999999999999742 11 11359999999999999999999999999
Q ss_pred HHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-CchHHHHHhcCCCeeeeCC
Q psy9949 162 AAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS-GDAKDLVTSLNPNLVIDYN 240 (383)
Q Consensus 162 aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~-~~~~~~~~~lg~~~v~~~~ 240 (383)
++.+++.+.|||+++. .+++ +++++|+|+| +|++|++++|+|+.+|++|+++++ +++.++++++|+++++++.
T Consensus 144 aa~l~~~~~ta~~~~~-~~~~----~~g~~VlV~G-~g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~ 217 (329)
T TIGR02822 144 LAPLLCAGIIGYRALL-RASL----PPGGRLGLYG-FGGSAHLTAQVALAQGATVHVMTRGAAARRLALALGAASAGGAY 217 (329)
T ss_pred hHHHhccchHHHHHHH-hcCC----CCCCEEEEEc-CCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHhCCceecccc
Confidence 9999999999999996 5777 8999999999 599999999999999999998885 4577899999999998754
Q ss_pred ChHHHHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccc
Q psy9949 241 EPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGEL 320 (383)
Q Consensus 241 ~~~~~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (383)
+.. ..++|+++++.+.......+ +++++ ++|+++.+|...... ..++.. . ..
T Consensus 218 ~~~-------~~~~d~~i~~~~~~~~~~~~-~~~l~--~~G~~v~~G~~~~~~------------~~~~~~--~----~~ 269 (329)
T TIGR02822 218 DTP-------PEPLDAAILFAPAGGLVPPA-LEALD--RGGVLAVAGIHLTDT------------PPLNYQ--R----HL 269 (329)
T ss_pred ccC-------cccceEEEECCCcHHHHHHH-HHhhC--CCcEEEEEeccCccC------------CCCCHH--H----Hh
Confidence 321 23689999988876654443 89999 999999986421000 001111 0 11
Q ss_pred cCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEE
Q psy9949 321 CKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381 (383)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl 381 (383)
.++..+. +......+++.++++++++|+++. ++++|+|+++++|++.+.+++..||+||
T Consensus 270 ~~~~~i~-g~~~~~~~~~~~~~~l~~~g~i~~-i~~~~~l~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 270 FYERQIR-SVTSNTRADAREFLELAAQHGVRV-TTHTYPLSEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred hCCcEEE-EeecCCHHHHHHHHHHHHhCCCee-EEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence 1222222 233345678899999999999974 5789999999999999999999999987
No 18
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=2.3e-41 Score=321.10 Aligned_cols=313 Identities=20% Similarity=0.212 Sum_probs=244.0
Q ss_pred ceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949 26 RTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR 105 (383)
Q Consensus 26 ~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~ 105 (383)
+||++++...+++ ++++ +.|.|+|+++||+|||.++|||++|++...|.. +...+|.++||
T Consensus 2 ~~~a~~~~~~~~~--~~~~-~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~----------------~~~~~p~v~G~ 62 (368)
T cd08300 2 TCKAAVAWEAGKP--LSIE-EVEVAPPKAGEVRIKILATGVCHTDAYTLSGAD----------------PEGLFPVILGH 62 (368)
T ss_pred cceEEEEecCCCC--cEEE-EeecCCCCCCEEEEEEEEEEechhhHHHhcCCC----------------ccCCCCceecc
Confidence 5889988876654 7788 899999999999999999999999999888751 22357899999
Q ss_pred ceeEEEEecCCCCCCCCCCCEEEEeecC---------------------------------------------CCCCCce
Q psy9949 106 DFCGKIVAKGPRVTDLNIDDVVYGVIQP---------------------------------------------HKQGSFS 140 (383)
Q Consensus 106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~---------------------------------------------~~~g~~a 140 (383)
|++|+|+++|+++++|++||||++.... ...|+|+
T Consensus 63 E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~a 142 (368)
T cd08300 63 EGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFS 142 (368)
T ss_pred ceeEEEEEeCCCCccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccce
Confidence 9999999999999999999999865110 0136899
Q ss_pred EEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEE
Q psy9949 141 KLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTT 219 (383)
Q Consensus 141 ~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~ 219 (383)
||+.++.+.++++|+++++++++.+++++.|||+++...+++ +++++|+|+| +|++|++++|+|+.+|+ +|+++
T Consensus 143 ey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a~~~~~~~----~~g~~VlV~G-~G~vG~~a~~~ak~~G~~~vi~~ 217 (368)
T cd08300 143 EYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKV----EPGSTVAVFG-LGAVGLAVIQGAKAAGASRIIGI 217 (368)
T ss_pred eEEEEchhceEeCCCCCChhhhhhhccchhhhHHHHHHhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEE
Confidence 999999999999999999999999999999999998767888 9999999998 79999999999999999 79998
Q ss_pred ecC-chHHHHHhcCCCeeeeCCCh--HHHHHHhcC--CCccEEEEcCCCCcccccccccccccCCC-ceEEEecCCCccC
Q psy9949 220 CSG-DAKDLVTSLNPNLVIDYNEP--EAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKF-SKFVTLRSPFLKN 293 (383)
Q Consensus 220 ~~~-~~~~~~~~lg~~~v~~~~~~--~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~-G~~v~~~~~~~~~ 293 (383)
+++ ++.++++++|++.++++++. ++.+++.+. +++|++||++|+......+ +++++ ++ |+++.+|......
T Consensus 218 ~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a-~~~l~--~~~G~~v~~g~~~~~~ 294 (368)
T cd08300 218 DINPDKFELAKKFGATDCVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAA-LEACH--KGWGTSVIIGVAAAGQ 294 (368)
T ss_pred eCCHHHHHHHHHcCCCEEEcccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHH-HHhhc--cCCCeEEEEccCCCCC
Confidence 854 56788899999999988763 466666532 4799999999986544433 88888 76 9999986421000
Q ss_pred CCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHh
Q psy9949 294 TDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQ 371 (383)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~ 371 (383)
......+.+. . ...+.+... + .....+++.++++++++|++++ +++++|+|+++++||+.+.
T Consensus 295 --------~~~~~~~~~~---~--~~~~~g~~~--~-~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~ 358 (368)
T cd08300 295 --------EISTRPFQLV---T--GRVWKGTAF--G-GWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMH 358 (368)
T ss_pred --------ccccCHHHHh---h--cCeEEEEEe--c-ccCcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHh
Confidence 0000001111 0 111111110 0 0123678899999999999875 5789999999999999998
Q ss_pred cCCCCCeEEEe
Q psy9949 372 QGHLRGKIILN 382 (383)
Q Consensus 372 ~~~~~gkvvl~ 382 (383)
+++. .|+++|
T Consensus 359 ~~~~-~k~~~~ 368 (368)
T cd08300 359 AGKS-IRTVVK 368 (368)
T ss_pred CCCC-ceeeeC
Confidence 8775 599886
No 19
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=6.5e-41 Score=318.45 Aligned_cols=311 Identities=17% Similarity=0.142 Sum_probs=243.8
Q ss_pred ceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949 26 RTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR 105 (383)
Q Consensus 26 ~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~ 105 (383)
.||++++.++++ .++++ +.+.|+++++||+|||.++|||++|++.+.+. ..+|.++||
T Consensus 12 ~mka~~~~~~~~--~~~~~-e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~-------------------~~~p~i~Gh 69 (378)
T PLN02827 12 TCRAAVAWGAGE--ALVME-EVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQ-------------------ALFPRIFGH 69 (378)
T ss_pred eeEEEEEecCCC--CceEE-EeecCCCCCCEEEEEEEEEecChhHHHHhcCC-------------------CCCCeeecc
Confidence 599999987653 37788 89999999999999999999999999987664 235789999
Q ss_pred ceeEEEEecCCCCCCCCCCCEEEEeecC---------------------------------------------CCCCCce
Q psy9949 106 DFCGKIVAKGPRVTDLNIDDVVYGVIQP---------------------------------------------HKQGSFS 140 (383)
Q Consensus 106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~---------------------------------------------~~~g~~a 140 (383)
|++|+|+++|+++++|++||||++.... ..+|+|+
T Consensus 70 E~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~a 149 (378)
T PLN02827 70 EASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFS 149 (378)
T ss_pred cceEEEEEcCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccce
Confidence 9999999999999999999999875310 0138999
Q ss_pred EEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEE
Q psy9949 141 KLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTT 219 (383)
Q Consensus 141 ~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~ 219 (383)
||+.+|.+.++++|+++++++++.+++++.++|+++...+++ +++++|+|+| +|++|++++|+|+.+|+ .|+++
T Consensus 150 eyv~v~~~~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~----~~g~~VlV~G-~G~vG~~~iqlak~~G~~~vi~~ 224 (378)
T PLN02827 150 EYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADV----SKGSSVVIFG-LGTVGLSVAQGAKLRGASQIIGV 224 (378)
T ss_pred eeEEechhheEECCCCCCHHHhhhhcchhHhhHHHHHhhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEE
Confidence 999999999999999999999999998989999988767777 8999999998 69999999999999999 57777
Q ss_pred e-cCchHHHHHhcCCCeeeeCCC--hHHHHHHhcC--CCccEEEEcCCCCcccccccccccccCCC-ceEEEecCCCccC
Q psy9949 220 C-SGDAKDLVTSLNPNLVIDYNE--PEAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKF-SKFVTLRSPFLKN 293 (383)
Q Consensus 220 ~-~~~~~~~~~~lg~~~v~~~~~--~~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~-G~~v~~~~~~~~~ 293 (383)
+ ++++.++++++|++.++++++ .++.+.+.+. +++|++||++|+......+ +++++ ++ |+++.+|.+...
T Consensus 225 ~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~-l~~l~--~g~G~iv~~G~~~~~- 300 (378)
T PLN02827 225 DINPEKAEKAKTFGVTDFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTA-LQSCS--DGWGLTVTLGVPKAK- 300 (378)
T ss_pred CCCHHHHHHHHHcCCcEEEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHH-HHhhc--cCCCEEEEECCcCCC-
Confidence 7 455778899999999998775 3566655542 3799999999987543333 88888 88 999998643100
Q ss_pred CCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHh
Q psy9949 294 TDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQ 371 (383)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~ 371 (383)
..+......+.++..++|... .......+++++++++++|++++ +++++|+|+++++|++.+.
T Consensus 301 ------------~~~~~~~~~~~~~~~i~g~~~---~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~ 365 (378)
T PLN02827 301 ------------PEVSAHYGLFLSGRTLKGSLF---GGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMR 365 (378)
T ss_pred ------------ccccccHHHHhcCceEEeeec---CCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHH
Confidence 000000000111222222110 00113567899999999999987 7899999999999999999
Q ss_pred cCCCCCeEEEeC
Q psy9949 372 QGHLRGKIILNA 383 (383)
Q Consensus 372 ~~~~~gkvvl~~ 383 (383)
+++. +|+||++
T Consensus 366 ~~~~-~k~vi~~ 376 (378)
T PLN02827 366 EGKC-LRCVIHM 376 (378)
T ss_pred CCCc-eEEEEEe
Confidence 8876 6999874
No 20
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=7.8e-41 Score=315.94 Aligned_cols=308 Identities=21% Similarity=0.315 Sum_probs=242.7
Q ss_pred cceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCcccc
Q psy9949 25 TRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLG 104 (383)
Q Consensus 25 ~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G 104 (383)
+++++++..+++++ +.++ +++.|+++++||+|||.+++||++|++.+.|.. ....+|.++|
T Consensus 8 ~~~~~~~~~~~~~~--~~~~-~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~----------------~~~~~p~i~G 68 (357)
T PLN02514 8 KKTTGWAARDPSGH--LSPY-TYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDL----------------GMSNYPMVPG 68 (357)
T ss_pred ceEEEEEEecCCCC--ceEE-eecCCCCCCCcEEEEEEEeccChHHHHhhcCCc----------------CcCCCCccCC
Confidence 45999999998865 7788 799999999999999999999999999887751 1234688999
Q ss_pred CceeEEEEecCCCCCCCCCCCEEEEe-----ec---------------------------CCCCCCceEEEeecCccccc
Q psy9949 105 RDFCGKIVAKGPRVTDLNIDDVVYGV-----IQ---------------------------PHKQGSFSKLILADSALVHK 152 (383)
Q Consensus 105 ~e~~G~Vv~vG~~v~~~~~Gd~V~~~-----~~---------------------------~~~~g~~a~~~~v~~~~~~~ 152 (383)
||++|+|+++|+++++|++||+|+.. |+ ...+|+|+||++++.+.+++
T Consensus 69 ~E~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~ 148 (357)
T PLN02514 69 HEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVK 148 (357)
T ss_pred ceeeEEEEEECCCcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEE
Confidence 99999999999999999999999741 11 01259999999999999999
Q ss_pred CCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHh
Q psy9949 153 KPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTS 230 (383)
Q Consensus 153 ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~ 230 (383)
+|+++++++++.+++++.|||+++...... +++++|+|+| +|++|++++|+|+.+|++|+++++++ +. ..+++
T Consensus 149 iP~~~~~~~aa~l~~~~~ta~~al~~~~~~----~~g~~vlV~G-~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~ 223 (357)
T PLN02514 149 IPEGMAPEQAAPLLCAGVTVYSPLSHFGLK----QSGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEH 223 (357)
T ss_pred CCCCCCHHHhhhhhhhHHHHHHHHHHcccC----CCCCeEEEEc-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHh
Confidence 999999999999999999999999766665 7899999997 79999999999999999988888543 44 34567
Q ss_pred cCCCeeeeCCChHHHHHHhc-CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHH
Q psy9949 231 LNPNLVIDYNEPEAMHSIAG-AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFD 309 (383)
Q Consensus 231 lg~~~v~~~~~~~~~~~i~~-~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (383)
+|++.++++.+.. .+.+ ..++|++||++|.......+ +++++ ++|+++.+|.+. +. ..
T Consensus 224 ~Ga~~~i~~~~~~---~~~~~~~~~D~vid~~g~~~~~~~~-~~~l~--~~G~iv~~G~~~-----------~~----~~ 282 (357)
T PLN02514 224 LGADDYLVSSDAA---EMQEAADSLDYIIDTVPVFHPLEPY-LSLLK--LDGKLILMGVIN-----------TP----LQ 282 (357)
T ss_pred cCCcEEecCCChH---HHHHhcCCCcEEEECCCchHHHHHH-HHHhc--cCCEEEEECCCC-----------CC----Cc
Confidence 9998877665432 2222 24799999999976544433 88999 999999986431 00 01
Q ss_pred HhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 310 LLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
+....+ ..++..+ .+......++++++++++++|++++++ ++|||+++.+||+.+.+++..||++|++
T Consensus 283 ~~~~~~----~~~~~~i-~g~~~~~~~~~~~~~~~~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~ 350 (357)
T PLN02514 283 FVTPML----MLGRKVI-TGSFIGSMKETEEMLEFCKEKGLTSMI-EVVKMDYVNTAFERLEKNDVRYRFVVDV 350 (357)
T ss_pred ccHHHH----hhCCcEE-EEEecCCHHHHHHHHHHHHhCCCcCcE-EEEcHHHHHHHHHHHHcCCCceeEEEEc
Confidence 111111 1222222 233445567899999999999998776 5899999999999999999889999874
No 21
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=5.9e-41 Score=318.57 Aligned_cols=312 Identities=18% Similarity=0.176 Sum_probs=244.3
Q ss_pred ceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949 26 RTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR 105 (383)
Q Consensus 26 ~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~ 105 (383)
+|||+++.+.+++ ++++ +.+.|+|+++||+|||.++|||++|++.+.|.. ....+|.++||
T Consensus 2 ~~ka~~~~~~~~~--~~l~-~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~----------------~~~~~p~i~G~ 62 (369)
T cd08301 2 TCKAAVAWEAGKP--LVIE-EVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKG----------------QTPLFPRILGH 62 (369)
T ss_pred ccEEEEEecCCCC--cEEE-EeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCC----------------CCCCCCccccc
Confidence 6999999987655 7788 899999999999999999999999999988751 22456899999
Q ss_pred ceeEEEEecCCCCCCCCCCCEEEEeecC----------------------------------------------CCCCCc
Q psy9949 106 DFCGKIVAKGPRVTDLNIDDVVYGVIQP----------------------------------------------HKQGSF 139 (383)
Q Consensus 106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~----------------------------------------------~~~g~~ 139 (383)
|++|+|+++|+++++|++||||+++... ...|+|
T Consensus 63 e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~ 142 (369)
T cd08301 63 EAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTF 142 (369)
T ss_pred ccceEEEEeCCCCCccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccc
Confidence 9999999999999999999999875210 023789
Q ss_pred eEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEE
Q psy9949 140 SKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVT 218 (383)
Q Consensus 140 a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~ 218 (383)
+||++++.+.++++|+++++++++++++++.|||+++....++ +++++|+|+| +|++|++++|+|+.+|+ +|++
T Consensus 143 aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~----~~g~~VlV~G-~g~vG~~a~q~ak~~G~~~vi~ 217 (369)
T cd08301 143 SEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKV----KKGSTVAIFG-LGAVGLAVAEGARIRGASRIIG 217 (369)
T ss_pred eeEEEEecccEEECCCCCCHHHhhhhcchhhHHHHHHHhhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEE
Confidence 9999999999999999999999999999999999998777888 9999999998 69999999999999999 8999
Q ss_pred EecC-chHHHHHhcCCCeeeeCCC--hHHHHHHhcC--CCccEEEEcCCCCcccccccccccccCCC-ceEEEecCCCcc
Q psy9949 219 TCSG-DAKDLVTSLNPNLVIDYNE--PEAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKF-SKFVTLRSPFLK 292 (383)
Q Consensus 219 ~~~~-~~~~~~~~lg~~~v~~~~~--~~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~-G~~v~~~~~~~~ 292 (383)
++++ ++.++++++|++.++++.+ .++.+.+++. +++|++||++|+......+ +++++ ++ |+++.+|.....
T Consensus 218 ~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~-~~~~~--~~~g~~v~~g~~~~~ 294 (369)
T cd08301 218 VDLNPSKFEQAKKFGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISA-FECVH--DGWGVTVLLGVPHKD 294 (369)
T ss_pred EcCCHHHHHHHHHcCCceEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHH-HHHhh--cCCCEEEEECcCCCC
Confidence 9854 5778889999998888765 3455555432 3799999999987544443 78888 85 999998643210
Q ss_pred CCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHH
Q psy9949 293 NTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKV 370 (383)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l 370 (383)
. .+++....+.++..++|... .....+++++++++++.+++++. +++++|||+++++||+.+
T Consensus 295 ~-------------~~~~~~~~~~~~~~i~g~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~ 358 (369)
T cd08301 295 A-------------VFSTHPMNLLNGRTLKGTLF---GGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLL 358 (369)
T ss_pred c-------------ccccCHHHHhcCCeEEEEec---CCCChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHH
Confidence 0 01111111101222222110 00112467899999999998754 678999999999999999
Q ss_pred hcCCCCCeEEE
Q psy9949 371 QQGHLRGKIIL 381 (383)
Q Consensus 371 ~~~~~~gkvvl 381 (383)
.+++.. |++|
T Consensus 359 ~~~~~~-k~~~ 368 (369)
T cd08301 359 LKGECL-RCIL 368 (369)
T ss_pred HCCCce-eEEe
Confidence 988864 8886
No 22
>KOG1198|consensus
Probab=100.00 E-value=8.6e-40 Score=302.13 Aligned_cols=327 Identities=34% Similarity=0.467 Sum_probs=256.9
Q ss_pred ceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949 26 RTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR 105 (383)
Q Consensus 26 ~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~ 105 (383)
.++.+.+..+.+...+.+.++.+.|.|++++++|++.++++|+.|+.+.+|..... .....+|.+++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~------------~~~~~~p~ii~~ 71 (347)
T KOG1198|consen 4 KIRRVSLVSPPGGGEVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPI------------PLGREFPGIIGR 71 (347)
T ss_pred ccceEEEeccCCCcceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCC------------CCccCCCCcccc
Confidence 34444454444444445555899999999999999999999999999999873211 122357755555
Q ss_pred ceeEE---EEecC-CCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhh-
Q psy9949 106 DFCGK---IVAKG-PRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITA- 180 (383)
Q Consensus 106 e~~G~---Vv~vG-~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~- 180 (383)
++.|. +...| ..+..+..||.+..... .|+|+||+++|...++++|+++++++||++|.+++|||.+|....
T Consensus 72 ~g~~~~~~~~~~g~~~~~~~~~g~~~~~~~~---~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~ 148 (347)
T KOG1198|consen 72 DGSGVVGAVESVGDDVVGGWVHGDAVVAFLS---SGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAP 148 (347)
T ss_pred ccCCceeEEeccccccccceEeeeEEeeccC---CCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccc
Confidence 55444 44455 33445777777666653 699999999999999999999999999999999999999999888
Q ss_pred -----hcCccCCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhc--CC
Q psy9949 181 -----ALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWD-IEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAG--AG 252 (383)
Q Consensus 181 -----~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G-~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~--~~ 252 (383)
++ ++|++|||+||+|++|++++|+|++.| .+|+++++.++.++++++|+++++||++.++.+.+++ ..
T Consensus 149 ~~~~~~~----~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~~~ 224 (347)
T KOG1198|consen 149 GKRSKKL----SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGADEVVDYKDENVVELIKKYTGK 224 (347)
T ss_pred ccccccc----CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCCcEeecCCCHHHHHHHHhhcCC
Confidence 78 999999999999999999999999999 5888888999999999999999999999999999987 56
Q ss_pred CccEEEEcCCCCcccccccccccccCCCceE--EEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEE
Q psy9949 253 PYDVILDAAGIPLDQINSYLPFLKTGKFSKF--VTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGF 330 (383)
Q Consensus 253 g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (383)
++|+||||+|+.....+ ..++. ..|+. +.+.+....+... . +... +.....+ .....++..+.+..
T Consensus 225 ~~DvVlD~vg~~~~~~~--~~~l~--~~g~~~~i~~~~~~~~~~~~---~-~~~~---~~~~~~~-~~~~~~~~~~~~~~ 292 (347)
T KOG1198|consen 225 GVDVVLDCVGGSTLTKS--LSCLL--KGGGGAYIGLVGDELANYKL---D-DLWQ---SANGIKL-YSLGLKGVNYRWLY 292 (347)
T ss_pred CccEEEECCCCCccccc--hhhhc--cCCceEEEEecccccccccc---c-cchh---hhhhhhh-eeeeeeccceeeee
Confidence 89999999999876666 77887 66643 3332222111111 1 1111 1111111 24556667777888
Q ss_pred EcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 331 FMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 331 ~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
+.+..+.++.+.+++++|++++.+.+.||++++.+|++.+.+++..||+++++
T Consensus 293 ~~~~~~~l~~l~~~ie~gkikp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~ 345 (347)
T KOG1198|consen 293 FVPSAEYLKALVELIEKGKIKPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEK 345 (347)
T ss_pred ecCCHHHHHHHHHHHHcCcccCCcceeeeHHHHHHHHHHHhhcCCcceEEEEe
Confidence 88999999999999999999999999999999999999999999999999875
No 23
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=3.7e-40 Score=311.49 Aligned_cols=312 Identities=18% Similarity=0.249 Sum_probs=227.2
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
||++++...+ ++ ++++ +.|.|+|+++||||||.++|||++|++.+.|..+. .+...+|.++|||
T Consensus 1 mka~~~~~~~-~~-l~~~-~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~-------------~~~~~~p~i~G~e 64 (355)
T cd08230 1 MKAIAVKPGK-PG-VRVV-DIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGT-------------APPGEDFLVLGHE 64 (355)
T ss_pred CceeEecCCC-CC-CeEE-eCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCC-------------CCCCCCCeeeccc
Confidence 6888888533 33 8888 89999999999999999999999999999885210 1122467899999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeecC---------------------------CCCCCceEEEeecCcccccCCCCCCH
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQP---------------------------HKQGSFSKLILADSALVHKKPSNISD 159 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~---------------------------~~~g~~a~~~~v~~~~~~~ip~~~~~ 159 (383)
++|+|+++|++ +.|++||||+..... ..+|+|+||++++.+.++++|++++
T Consensus 65 ~~G~V~~vG~~-~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~- 142 (355)
T cd08230 65 ALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA- 142 (355)
T ss_pred cceEEEEecCC-CCCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC-
Confidence 99999999999 899999999864211 1359999999999999999999999
Q ss_pred HHHHhhhHHHHHHHHHHHHh------hhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec----CchHHHHH
Q psy9949 160 EEAAGVLYTGLTAWSALQIT------AALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS----GDAKDLVT 229 (383)
Q Consensus 160 ~~aa~l~~~~~tA~~~l~~~------~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~----~~~~~~~~ 229 (383)
++ +++..++.++++++... ..+ +++++|+|+| +|++|++++|+||.+|++|+++++ ++++++++
T Consensus 143 ~~-a~~~~p~~~~~~a~~~~~~~~~~~~~----~~g~~vlI~G-~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~ 216 (355)
T cd08230 143 DV-GVLLEPLSVVEKAIEQAEAVQKRLPT----WNPRRALVLG-AGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVE 216 (355)
T ss_pred cc-eeecchHHHHHHHHHHHhhhhhhccc----CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH
Confidence 44 43334444444444321 223 6899999998 699999999999999999999885 34678889
Q ss_pred hcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHH
Q psy9949 230 SLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFD 309 (383)
Q Consensus 230 ~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (383)
++|++. +++.+.++.+ .....++|+|||++|+......+ +++++ ++|+++.+|...... ...+ ... .
T Consensus 217 ~~Ga~~-v~~~~~~~~~-~~~~~~~d~vid~~g~~~~~~~~-~~~l~--~~G~~v~~G~~~~~~--~~~~----~~~--~ 283 (355)
T cd08230 217 ELGATY-VNSSKTPVAE-VKLVGEFDLIIEATGVPPLAFEA-LPALA--PNGVVILFGVPGGGR--EFEV----DGG--E 283 (355)
T ss_pred HcCCEE-ecCCccchhh-hhhcCCCCEEEECcCCHHHHHHH-HHHcc--CCcEEEEEecCCCCC--cccc----Chh--h
Confidence 999986 4665555443 33345899999999987543433 88999 999999986432100 0000 000 0
Q ss_pred HhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCC------cccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 310 LLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQ------IKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~------l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
+.. .+..++..+ .+....+.++++++++++.++. ++++++++|+++++++||+.+.++. +|+||++
T Consensus 284 ~~~-----~~~~k~~~i-~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~ 355 (355)
T cd08230 284 LNR-----DLVLGNKAL-VGSVNANKRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW 355 (355)
T ss_pred hhh-----hHhhcCcEE-EEecCCchhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence 000 112222222 2333445678899999998876 5667899999999999999887544 5999874
No 24
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=9.8e-40 Score=307.13 Aligned_cols=320 Identities=17% Similarity=0.225 Sum_probs=238.4
Q ss_pred cceeeEEEee-cCC---CceeEeecc--ccCC-CCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCC
Q psy9949 25 TRTAAWQISS-YGG---ADELQFNDN--VKTP-ILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVL 97 (383)
Q Consensus 25 ~~~~a~~~~~-~g~---~~~l~~~~~--~~~p-~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~ 97 (383)
.++|.|++.+ +.+ ++.|++++. .+.| ++++|||||||.+++||+.|+....+. ....
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~----------------~~~~ 70 (348)
T PLN03154 7 VENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDF----------------HDSY 70 (348)
T ss_pred ccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhcc----------------CCCC
Confidence 4578888853 322 355888832 3555 457999999999999999988654432 1112
Q ss_pred CCCccccC--ceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcc--c--ccCCCCCCHH-HHHhhhHHHH
Q psy9949 98 EFPLTLGR--DFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSAL--V--HKKPSNISDE-EAAGVLYTGL 170 (383)
Q Consensus 98 ~~p~~~G~--e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~--~--~~ip~~~~~~-~aa~l~~~~~ 170 (383)
.+|+++|+ |++|+|..+|+++++|++||+|+++ |+|+||++++.+. + +++|++++++ ++++++++++
T Consensus 71 ~~p~~~G~~~~~~G~v~~vg~~v~~~~~Gd~V~~~------~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~ 144 (348)
T PLN03154 71 LPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLISGI------TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGF 144 (348)
T ss_pred CCCcCCCCeeEeeEEEEEEecCCCCCCCCCEEEec------CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHH
Confidence 35789998 8899999999999999999999875 7899999998753 5 4459999986 7889999999
Q ss_pred HHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHH-hcCCCeeeeCCC-hHHHHH
Q psy9949 171 TAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVT-SLNPNLVIDYNE-PEAMHS 247 (383)
Q Consensus 171 tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~-~lg~~~v~~~~~-~~~~~~ 247 (383)
|||+++.+.+++ ++|++|+|+|++|++|++++|+|+.+|++|++++++ ++.++++ ++|++.++++++ .++.+.
T Consensus 145 TA~~al~~~~~~----~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~ 220 (348)
T PLN03154 145 TAYAGFYEVCSP----KKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAA 220 (348)
T ss_pred HHHHHHHHhcCC----CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHH
Confidence 999999877888 999999999988999999999999999999998855 4667776 799999999875 366666
Q ss_pred HhcC--CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCcc
Q psy9949 248 IAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNT 325 (383)
Q Consensus 248 i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (383)
+.+. +++|++||++|+...... +++++ ++|+++.+|........ ...+.. ....+.. +++.+.|..
T Consensus 221 i~~~~~~gvD~v~d~vG~~~~~~~--~~~l~--~~G~iv~~G~~~~~~~~---~~~~~~-~~~~~~~----k~~~i~g~~ 288 (348)
T PLN03154 221 LKRYFPEGIDIYFDNVGGDMLDAA--LLNMK--IHGRIAVCGMVSLNSLS---ASQGIH-NLYNLIS----KRIRMQGFL 288 (348)
T ss_pred HHHHCCCCcEEEEECCCHHHHHHH--HHHhc--cCCEEEEECccccCCCC---CCCCcc-cHHHHhh----ccceEEEEE
Confidence 6543 479999999998655444 89999 99999998642111000 000000 0011111 122222211
Q ss_pred EEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 326 IRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
.. .......+.++++++++++|++++.+..+|+|+++++|++.+.+++..||+||++
T Consensus 289 ~~-~~~~~~~~~~~~~~~l~~~G~l~~~~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~ 345 (348)
T PLN03154 289 QS-DYLHLFPQFLENVSRYYKQGKIVYIEDMSEGLESAPAALVGLFSGKNVGKQVIRV 345 (348)
T ss_pred HH-HHHHHHHHHHHHHHHHHHCCCccCceecccCHHHHHHHHHHHHcCCCCceEEEEe
Confidence 00 0000124578899999999999988888899999999999999999999999974
No 25
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=9.8e-40 Score=310.96 Aligned_cols=320 Identities=14% Similarity=0.144 Sum_probs=230.6
Q ss_pred ceeeEEEeecCCCceeEeeccccCCCCC-------CCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCC
Q psy9949 26 RTAAWQISSYGGADELQFNDNVKTPILK-------SKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLE 98 (383)
Q Consensus 26 ~~~a~~~~~~g~~~~l~~~~~~~~p~~~-------~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 98 (383)
-|||+++..+++ ++++ ++|.|+|+ +|||||||.++|||++|++++.|.. ...
T Consensus 2 ~mka~v~~~~~~---~~~~-e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~-----------------~~~ 60 (393)
T TIGR02819 2 GNRGVVYLGPGK---VEVQ-DIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRT-----------------TAP 60 (393)
T ss_pred CceEEEEecCCc---eeEE-eccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCC-----------------CCC
Confidence 489999987664 6788 88988874 6899999999999999999988751 134
Q ss_pred CCccccCceeEEEEecCCCCCCCCCCCEEEEee------------------cC----------------CCCCCceEEEe
Q psy9949 99 FPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVI------------------QP----------------HKQGSFSKLIL 144 (383)
Q Consensus 99 ~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~------------------~~----------------~~~g~~a~~~~ 144 (383)
+|.++|||++|+|+++|++|++|++||||+... .. ..+|+|+||++
T Consensus 61 ~p~i~GhE~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~ 140 (393)
T TIGR02819 61 TGLVLGHEITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVM 140 (393)
T ss_pred CCccccceeEEEEEEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEE
Confidence 689999999999999999999999999997521 00 12599999999
Q ss_pred ecCc--ccccCCCCCCH----HHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEE
Q psy9949 145 ADSA--LVHKKPSNISD----EEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVT 218 (383)
Q Consensus 145 v~~~--~~~~ip~~~~~----~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~ 218 (383)
+|.. .++++|++++. .+++++.+++.+||+++. ..++ +++++|+|.| +|++|++++|+|+.+|++++.
T Consensus 141 v~~~~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~~-~~~~----~~g~~VlV~G-~G~iG~~aiqlAk~~Ga~~vi 214 (393)
T TIGR02819 141 VPYADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGAV-TAGV----GPGSTVYIAG-AGPVGLAAAASAQLLGAAVVI 214 (393)
T ss_pred echhhCceEECCCcccccccccceeeeccHHHHHHHHHH-hcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCceEE
Confidence 9964 79999998753 456777788899999986 5777 8999999976 899999999999999996554
Q ss_pred E-ec-CchHHHHHhcCCCeeeeCCChHHHHHHhc---CCCccEEEEcCCCCc--------------ccccccccccccCC
Q psy9949 219 T-CS-GDAKDLVTSLNPNLVIDYNEPEAMHSIAG---AGPYDVILDAAGIPL--------------DQINSYLPFLKTGK 279 (383)
Q Consensus 219 ~-~~-~~~~~~~~~lg~~~v~~~~~~~~~~~i~~---~~g~d~v~d~~g~~~--------------~~~~~~~~~l~~~~ 279 (383)
+ ++ .++.++++++|++.+....+.++.+.+.+ ..++|++||++|.+. ....+ +++++ +
T Consensus 215 ~~d~~~~r~~~a~~~Ga~~v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~ 291 (393)
T TIGR02819 215 VGDLNPARLAQARSFGCETVDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSL-MEVTR--V 291 (393)
T ss_pred EeCCCHHHHHHHHHcCCeEEecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHH-HHHhh--C
Confidence 4 33 34778999999975333333455555543 347999999999862 34443 88999 9
Q ss_pred CceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccc-e
Q psy9949 280 FSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VID-S 356 (383)
Q Consensus 280 ~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~-~ 356 (383)
+|+++.+|.+..++..... .......+++..... ..++..+. +......+.+.++++++++|+++. +++ +
T Consensus 292 ~G~i~~~G~~~~~~~~~~~--~~~~~~~~~i~~~~~----~~~~~~i~-g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~ 364 (393)
T TIGR02819 292 GGAIGIPGLYVTEDPGAVD--AAAKTGSLSIRFGLG----WAKSHSFH-TGQTPVMKYNRNLMQAILHDRVQIAKAVNVT 364 (393)
T ss_pred CCEEEEeeecCCccccccc--ccccccccccchHHh----hccCceEE-eccCChhhhHHHHHHHHHcCCCCHHHceecc
Confidence 9999999764211110000 000001111111111 11112221 111122344578999999999864 455 7
Q ss_pred eecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 357 KYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 357 ~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
+|||+++++||+.+.+++. +|++|++
T Consensus 365 ~~~l~~~~~a~~~~~~~~~-~Kvvi~~ 390 (393)
T TIGR02819 365 VISLDDAPEGYAEFDAGAA-KKFVIDP 390 (393)
T ss_pred eecHHHHHHHHHHHhhCCc-eEEEEeC
Confidence 8999999999999987754 8999864
No 26
>KOG0025|consensus
Probab=100.00 E-value=9.5e-40 Score=279.98 Aligned_cols=324 Identities=22% Similarity=0.223 Sum_probs=263.3
Q ss_pred cCCCcccceeeEEEeecCCC-ceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCC
Q psy9949 19 NHLKYSTRTAAWQISSYGGA-DELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVL 97 (383)
Q Consensus 19 ~~~~~~~~~~a~~~~~~g~~-~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~ 97 (383)
..+.+|...|+++++..|+| +.++++ .+++|.....+|+||.+|+.|||+|+-.++|.+ ...+
T Consensus 12 sa~q~~~~~kalvY~~hgdP~kVlql~-~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvY---------------pvrP 75 (354)
T KOG0025|consen 12 SASQMPARSKALVYSEHGDPAKVLQLK-NLELPAVPGSDVLVKMLAAPINPSDINQIQGVY---------------PVRP 75 (354)
T ss_pred cccccccccceeeecccCCchhhheee-cccCCCCCCCceeeeeeecCCChHHhhhhcccc---------------CCCC
Confidence 34556778999999999998 458899 899998888889999999999999999999984 3557
Q ss_pred CCCccccCceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHH
Q psy9949 98 EFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQ 177 (383)
Q Consensus 98 ~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~ 177 (383)
++|.+-|.|++|+|+.+|+++++|++||+|+-... +.|.|++|.+.+++.+++++..++++.||.+..+.||||..|.
T Consensus 76 ~~PAVgGnEGv~eVv~vGs~vkgfk~Gd~VIp~~a--~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~ 153 (354)
T KOG0025|consen 76 ELPAVGGNEGVGEVVAVGSNVKGFKPGDWVIPLSA--NLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLK 153 (354)
T ss_pred CCCcccCCcceEEEEEecCCcCccCCCCeEeecCC--CCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHH
Confidence 78999999999999999999999999999998764 4599999999999999999999999999999999999999999
Q ss_pred HhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH----HHHHhcCCCeeeeCCC---hHHHHHHh
Q psy9949 178 ITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK----DLVTSLNPNLVIDYNE---PEAMHSIA 249 (383)
Q Consensus 178 ~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~----~~~~~lg~~~v~~~~~---~~~~~~i~ 249 (383)
+.-++ ++||+|+-.||.+++|.+.+|+||++|++-+-++|++ +. +.++.+||++|+...+ ..+.....
T Consensus 154 dfv~L----~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~ 229 (354)
T KOG0025|consen 154 DFVQL----NKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFKG 229 (354)
T ss_pred HHHhc----CCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhhc
Confidence 99999 9999999999999999999999999999888888653 22 3556799999984222 12222212
Q ss_pred cCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhh-hccccccCCccEEE
Q psy9949 250 GAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSN-FESGELCKTNTIRW 328 (383)
Q Consensus 250 ~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 328 (383)
+..++.+.|||+|+..+... .+.|. ++|+.+.+|+ +++..+.+.... +|+.+.++|.+...
T Consensus 230 ~~~~prLalNcVGGksa~~i--ar~L~--~GgtmvTYGG--------------MSkqPv~~~ts~lIFKdl~~rGfWvt~ 291 (354)
T KOG0025|consen 230 DNPRPRLALNCVGGKSATEI--ARYLE--RGGTMVTYGG--------------MSKQPVTVPTSLLIFKDLKLRGFWVTR 291 (354)
T ss_pred cCCCceEEEeccCchhHHHH--HHHHh--cCceEEEecC--------------ccCCCcccccchheeccceeeeeeeee
Confidence 34579999999999988777 88999 9999999953 344444444433 36777888877654
Q ss_pred EEEcC-----CHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCC-CCCeEEEe
Q psy9949 329 GFFMP-----IPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGH-LRGKIILN 382 (383)
Q Consensus 329 ~~~~~-----~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~-~~gkvvl~ 382 (383)
+.... ..+.++++.++++.|+|........+|++...|++...... ..||-++.
T Consensus 292 W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~ 351 (354)
T KOG0025|consen 292 WKKEHKSPEERKEMIDELCDLYRRGKLKAPNCEKVPLADHKTALDAALSKFGKSGKQIIV 351 (354)
T ss_pred hhhccCCcHHHHHHHHHHHHHHHcCeeccccceeeechhhhHHHHHHHHHhccCCceEEE
Confidence 43322 13578999999999999998888899999988888644332 22555543
No 27
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=1.3e-39 Score=306.84 Aligned_cols=312 Identities=19% Similarity=0.270 Sum_probs=234.7
Q ss_pred eeeEEEeecCCCceeEeeccccCCCC-CCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPIL-KSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR 105 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~ 105 (383)
||++++.+++. ++++ +.|.|+| +++||+|||.++|+|++|++...... ...+|.++||
T Consensus 1 Mka~~~~~~~~---~~~~-~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~-----------------~~~~p~i~G~ 59 (347)
T PRK10309 1 MKSVVNDTDGI---VRVA-ESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG-----------------AHYYPITLGH 59 (347)
T ss_pred CceEEEeCCCc---eEEE-ECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC-----------------CCCCCccccc
Confidence 78999987653 7888 7899987 59999999999999999997543220 0235789999
Q ss_pred ceeEEEEecCCCCCCCCCCCEEEEeec------------------------CCCCCCceEEEeecCcccccCCCCCCHHH
Q psy9949 106 DFCGKIVAKGPRVTDLNIDDVVYGVIQ------------------------PHKQGSFSKLILADSALVHKKPSNISDEE 161 (383)
Q Consensus 106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~ 161 (383)
|++|+|+++|+++++|++||+|+++.. ...+|+|+||+.++.+.++++|+++++++
T Consensus 60 e~~G~V~~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~ 139 (347)
T PRK10309 60 EFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIED 139 (347)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHH
Confidence 999999999999999999999987521 11359999999999999999999999999
Q ss_pred HHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecC-chHHHHHhcCCCeeeeC
Q psy9949 162 AAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTCSG-DAKDLVTSLNPNLVIDY 239 (383)
Q Consensus 162 aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~~-~~~~~~~~lg~~~v~~~ 239 (383)
++.+. ...++|+++. ...+ +++++|+|+| +|++|++++|+|+.+|++ |++++++ ++.++++++|++.++++
T Consensus 140 aa~~~-~~~~~~~~~~-~~~~----~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~ 212 (347)
T PRK10309 140 GAFIE-PITVGLHAFH-LAQG----CEGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNS 212 (347)
T ss_pred hhhhh-HHHHHHHHHH-hcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecC
Confidence 99874 3455788864 5666 8999999997 799999999999999996 6777744 56788899999999887
Q ss_pred CChHHHHHHhc---CCCcc-EEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhh
Q psy9949 240 NEPEAMHSIAG---AGPYD-VILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNF 315 (383)
Q Consensus 240 ~~~~~~~~i~~---~~g~d-~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (383)
++.+ .+++.+ ..++| ++|||+|+......+ +++++ ++|+++.+|.+... . .. ....+.. .+
T Consensus 213 ~~~~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~-~~~l~--~~G~iv~~G~~~~~------~--~~--~~~~~~~-~~ 277 (347)
T PRK10309 213 REMS-APQIQSVLRELRFDQLILETAGVPQTVELA-IEIAG--PRAQLALVGTLHHD------L--HL--TSATFGK-IL 277 (347)
T ss_pred cccC-HHHHHHHhcCCCCCeEEEECCCCHHHHHHH-HHHhh--cCCEEEEEccCCCC------c--cc--ChhhhhH-Hh
Confidence 7644 333332 34788 999999987554443 89999 99999998643210 0 00 0000000 01
Q ss_pred ccccccCCccEEEEEEcC-CHHHHHHHHHHHHcCCcc--cccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 316 ESGELCKTNTIRWGFFMP-IPYAVKEINKFIERGQIK--PVIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~g~l~--~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
.++..+.|... +.... ..++++++++++++|+++ ++++++|+|+++++|++.+.+++..||+|+++
T Consensus 278 ~~~~~i~g~~~--~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 278 RKELTVIGSWM--NYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred hcCcEEEEEec--cccCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence 11223332111 00011 247789999999999884 67899999999999999999988889999875
No 28
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=4.3e-39 Score=305.20 Aligned_cols=311 Identities=20% Similarity=0.183 Sum_probs=240.9
Q ss_pred ceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949 26 RTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR 105 (383)
Q Consensus 26 ~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~ 105 (383)
.|||+++.+.+++ ++++ +.|.|+++++||+|||.++|||++|++.+.|. ....+|.++||
T Consensus 2 ~~ka~~~~~~~~~--~~~~-~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~-----------------~~~~~p~i~G~ 61 (365)
T cd08277 2 KCKAAVAWEAGKP--LVIE-EIEVAPPKANEVRIKMLATSVCHTDILAIEGF-----------------KATLFPVILGH 61 (365)
T ss_pred ccEEEEEccCCCC--cEEE-EEECCCCCCCEEEEEEEEEeechhhHHHhcCC-----------------CCCCCCeeccc
Confidence 5889998876654 7788 89999999999999999999999999998875 11356889999
Q ss_pred ceeEEEEecCCCCCCCCCCCEEEEeecC--------------------------------------------CCCCCceE
Q psy9949 106 DFCGKIVAKGPRVTDLNIDDVVYGVIQP--------------------------------------------HKQGSFSK 141 (383)
Q Consensus 106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~--------------------------------------------~~~g~~a~ 141 (383)
|++|+|+++|++++++++||+|++.... ...|+|+|
T Consensus 62 e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae 141 (365)
T cd08277 62 EGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQ 141 (365)
T ss_pred ceeEEEEeeCCCCccCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCccccccccccccee
Confidence 9999999999999999999999874210 01489999
Q ss_pred EEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEe
Q psy9949 142 LILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTC 220 (383)
Q Consensus 142 ~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~ 220 (383)
|++++.+.++++|+++++++++.+++++.|||+++.+.+++ +++++|+|+| +|++|++++++|+.+|+ +|++++
T Consensus 142 ~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~----~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~ 216 (365)
T cd08277 142 YTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKV----EPGSTVAVFG-LGAVGLSAIMGAKIAGASRIIGVD 216 (365)
T ss_pred eEEEchhheEECCCCCCHHHhhHhcchhHHHHHHHHhhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEe
Confidence 99999999999999999999999999999999998777888 9999999997 79999999999999999 798888
Q ss_pred cC-chHHHHHhcCCCeeeeCCCh--HHHHHHhcC--CCccEEEEcCCCCcccccccccccccCCC-ceEEEecCCCccCC
Q psy9949 221 SG-DAKDLVTSLNPNLVIDYNEP--EAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKF-SKFVTLRSPFLKNT 294 (383)
Q Consensus 221 ~~-~~~~~~~~lg~~~v~~~~~~--~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~-G~~v~~~~~~~~~~ 294 (383)
++ ++.++++++|++.++++.+. ++.+.+.+. +++|++||++|+......+ +++++ ++ |+++.+|......
T Consensus 217 ~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~-~~~l~--~~~G~~v~~g~~~~~~- 292 (365)
T cd08277 217 INEDKFEKAKEFGATDFINPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEA-LESTK--LGWGVSVVVGVPPGAE- 292 (365)
T ss_pred CCHHHHHHHHHcCCCcEeccccccchHHHHHHHHhCCCCCEEEECCCChHHHHHH-HHhcc--cCCCEEEEEcCCCccc-
Confidence 54 57788899999999887652 334444432 5799999999976553433 88887 74 9999986431000
Q ss_pred CCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcc--cccceeecCCCHHHHHHHHhc
Q psy9949 295 DSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIK--PVIDSKYNFCELPTAFEKVQQ 372 (383)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~~~~~~~l~~~~~a~~~l~~ 372 (383)
. ... ...+.. +..+.+.. ........+++++++++++++++ ++++++|+|+++++|++.+.+
T Consensus 293 --~----~~~--~~~~~~-----~~~i~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~ 356 (365)
T cd08277 293 --L----SIR--PFQLIL-----GRTWKGSF---FGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKS 356 (365)
T ss_pred --c----ccC--HhHHhh-----CCEEEeee---cCCCChHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHC
Confidence 0 000 011110 11111110 00001245789999999999764 578999999999999999988
Q ss_pred CCCCCeEEEe
Q psy9949 373 GHLRGKIILN 382 (383)
Q Consensus 373 ~~~~gkvvl~ 382 (383)
++. .|+++.
T Consensus 357 ~~~-~k~~i~ 365 (365)
T cd08277 357 GEC-IRTVIT 365 (365)
T ss_pred CCC-ceEeeC
Confidence 874 588873
No 29
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=9.5e-40 Score=302.36 Aligned_cols=297 Identities=20% Similarity=0.194 Sum_probs=220.4
Q ss_pred ceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeC-hhhHHHhccCCcchhhhhhcccccCCCCCCCCCcccc
Q psy9949 26 RTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVN-PIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLG 104 (383)
Q Consensus 26 ~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~-~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G 104 (383)
+||++++..++ .++++ +.+.|+|+++||+|||.++||| ++|++.++|..+. .....+|.++|
T Consensus 1 ~~ka~~~~~~~---~l~~~-e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~-------------~~~~~~P~i~G 63 (308)
T TIGR01202 1 KTQAIVLSGPN---QIELR-EVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPP-------------FPGMGYPLVPG 63 (308)
T ss_pred CceEEEEeCCC---eEEEE-EecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCC-------------CCCCCCCccCc
Confidence 47889887644 57888 8999999999999999999996 7999988876210 01135689999
Q ss_pred CceeEEEEecCCCCCCCCCCCEEEEeecC------CCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHH
Q psy9949 105 RDFCGKIVAKGPRVTDLNIDDVVYGVIQP------HKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQI 178 (383)
Q Consensus 105 ~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~------~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~ 178 (383)
||++|+|+++|+++ +|++||||+..... ...|+|+||+++|.+.++++|++++++. +.++ .+.|||+++..
T Consensus 64 hE~~G~V~~vG~~v-~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~ 140 (308)
T TIGR01202 64 YESVGRVVEAGPDT-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVAG 140 (308)
T ss_pred ceeEEEEEEecCCC-CCCCCCEEEEeCccccccccccCCcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHh
Confidence 99999999999998 69999999864210 1259999999999999999999999864 5454 46899999964
Q ss_pred hhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-C-chHHHHHhcCCCeeeeCCChHHHHHHhcCCCccE
Q psy9949 179 TAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS-G-DAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDV 256 (383)
Q Consensus 179 ~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~-~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~ 256 (383)
.. .++++|+|+| +|++|++++|+|+.+|++++++++ . ++.+.+.+ ..++++.+. ...++|+
T Consensus 141 -~~-----~~~~~vlV~G-~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~---~~~i~~~~~-------~~~g~Dv 203 (308)
T TIGR01202 141 -AE-----VKVLPDLIVG-HGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATG---YEVLDPEKD-------PRRDYRA 203 (308)
T ss_pred -cc-----cCCCcEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhh---ccccChhhc-------cCCCCCE
Confidence 32 4688999998 899999999999999997555443 2 23333333 344554321 2347999
Q ss_pred EEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHH
Q psy9949 257 ILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPY 336 (383)
Q Consensus 257 v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (383)
+|||+|++.....+ +++++ ++|+++.+|.+. +. ..+++. . ...++..+. +......+
T Consensus 204 vid~~G~~~~~~~~-~~~l~--~~G~iv~~G~~~-----------~~--~~~~~~--~----~~~~~~~i~-~~~~~~~~ 260 (308)
T TIGR01202 204 IYDASGDPSLIDTL-VRRLA--KGGEIVLAGFYT-----------EP--VNFDFV--P----AFMKEARLR-IAAEWQPG 260 (308)
T ss_pred EEECCCCHHHHHHH-HHhhh--cCcEEEEEeecC-----------CC--cccccc--h----hhhcceEEE-Eecccchh
Confidence 99999997653443 89999 999999986421 00 011111 1 112222222 33334577
Q ss_pred HHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949 337 AVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQGHLRGKIILN 382 (383)
Q Consensus 337 ~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~ 382 (383)
+++++++++++|++++ +++++|||+++++|++.+.++...+|++|+
T Consensus 261 ~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 261 DLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred HHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 8999999999999865 689999999999999998877777899874
No 30
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=1.5e-38 Score=300.19 Aligned_cols=344 Identities=49% Similarity=0.796 Sum_probs=262.1
Q ss_pred eeeEEEeecCCCc-eeEeeccccCCCCC-CCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCcccc
Q psy9949 27 TAAWQISSYGGAD-ELQFNDNVKTPILK-SKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLG 104 (383)
Q Consensus 27 ~~a~~~~~~g~~~-~l~~~~~~~~p~~~-~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G 104 (383)
|||+++.++++++ .+.++ +.+.|+|. ++||+|||+++++|++|+.+..|.....+...++.. +..+....+|.++|
T Consensus 1 ~~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~-~~~~~~~~~p~~~G 78 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLE-NARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQ-SCKYSGIEFPLTLG 78 (350)
T ss_pred CceEEecccCCCcceeeec-ccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccc-cccccCCCCCeeec
Confidence 7889998888764 36777 79999994 999999999999999999988774110000000000 00000234588999
Q ss_pred CceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCc
Q psy9949 105 RDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGL 184 (383)
Q Consensus 105 ~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~ 184 (383)
||++|+|+++|++++++++||+|+++......|+|++|+.++.+.++++|+++++++++.+++.++|||+++.+.+.+
T Consensus 79 ~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~-- 156 (350)
T cd08248 79 RDCSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGL-- 156 (350)
T ss_pred ceeEEEEEecCCCcccCCCCCEEEEecCCCCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccC--
Confidence 999999999999999999999999976433459999999999999999999999999999999999999999877766
Q ss_pred cCCC----CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEc
Q psy9949 185 VYPR----DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDA 260 (383)
Q Consensus 185 ~~~~----~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~ 260 (383)
++ +++|+|+|++|++|++++++|+.+|++|+++.++++.+.++++|.+.+++....++..++....++|++||+
T Consensus 157 --~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~vd~vi~~ 234 (350)
T cd08248 157 --NPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCSTDAIPLVKSLGADDVIDYNNEDFEEELTERGKFDVILDT 234 (350)
T ss_pred --CCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCcchHHHHHHhCCceEEECCChhHHHHHHhcCCCCEEEEC
Confidence 54 999999999999999999999999999998887667778889999888888777777777766789999999
Q ss_pred CCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHH
Q psy9949 261 AGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKE 340 (383)
Q Consensus 261 ~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (383)
+|+...... +++++ ++|+++.++..........+.........+++....+ ....++....+.......+.+.+
T Consensus 235 ~g~~~~~~~--~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 308 (350)
T cd08248 235 VGGDTEKWA--LKLLK--KGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNV--KSLLKGSHYRWGFFSPSGSALDE 308 (350)
T ss_pred CChHHHHHH--HHHhc--cCCEEEEecCCcccccccccccchhhhhHHHHHHHHH--HHHhcCCCeeEEEECCCHHHHHH
Confidence 998754444 89999 9999999875432221111111111222333333322 11223333333333445788999
Q ss_pred HHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949 341 INKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382 (383)
Q Consensus 341 ~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~ 382 (383)
++++++++.+.+.+.+.|++++++++++.+.+++..+|++++
T Consensus 309 ~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 350 (350)
T cd08248 309 LAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK 350 (350)
T ss_pred HHHHHhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence 999999999987788899999999999999988888898874
No 31
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=1.7e-39 Score=304.85 Aligned_cols=301 Identities=15% Similarity=0.133 Sum_probs=217.1
Q ss_pred ceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949 26 RTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR 105 (383)
Q Consensus 26 ~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~ 105 (383)
..+++++..++ +++++ +.+.|+ +++||+|||.++|||++|++++.|..+.. .....+|.++||
T Consensus 2 ~~~~~~~~~~~---~~~~~-~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~------------~~~~~~P~i~Gh 64 (341)
T cd08237 2 INQVYRLVRPK---FFEVT-YEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPE------------ALKKKLPMALIH 64 (341)
T ss_pred cccceEEeccc---eEEEe-ecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcc------------cccCCCCeeccc
Confidence 46788887655 47888 889995 99999999999999999999998852100 001357899999
Q ss_pred ceeEEEEecCCCCCCCCCCCEEEEeec---------------------CCCCCCceEEEeecCcccccCCCCCCHHHHHh
Q psy9949 106 DFCGKIVAKGPRVTDLNIDDVVYGVIQ---------------------PHKQGSFSKLILADSALVHKKPSNISDEEAAG 164 (383)
Q Consensus 106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~---------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~ 164 (383)
|++|+|+++|.+ +|++||||+.... ...+|+|+||+++|.++++++|+++++++|+.
T Consensus 65 E~~G~V~~~g~~--~~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~ 142 (341)
T cd08237 65 EGIGVVVSDPTG--TYKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAAF 142 (341)
T ss_pred eeEEEEEeeCCC--ccCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhhh
Confidence 999999998764 7999999986421 12359999999999999999999999998875
Q ss_pred hhHHHHHHHHHHHHh--hhcCccCCCCCEEEEEcCCchHHHHHHHHHHH-CCC-EEEEEecC-chHHHHHhcCCCeeeeC
Q psy9949 165 VLYTGLTAWSALQIT--AALGLVYPRDKRVLVLGASGGVGTMAVQLLKA-WDI-EVVTTCSG-DAKDLVTSLNPNLVIDY 239 (383)
Q Consensus 165 l~~~~~tA~~~l~~~--~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~-~G~-~Vi~~~~~-~~~~~~~~lg~~~v~~~ 239 (383)
+. ++++||+++... ..+ +++++|+|.| +|++|++++|+|+. +|+ +|++++++ ++++++++++++..++
T Consensus 143 ~~-~~~~a~~a~~~~~~~~~----~~g~~VlV~G-~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~- 215 (341)
T cd08237 143 TE-LVSVGVHAISRFEQIAH----KDRNVIGVWG-DGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLID- 215 (341)
T ss_pred hc-hHHHHHHHHHHHhhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh-
Confidence 54 677899998643 334 7899999999 79999999999986 664 89888854 5677777766653321
Q ss_pred CChHHHHHHhcCCCccEEEEcCCCC---cccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhc
Q psy9949 240 NEPEAMHSIAGAGPYDVILDAAGIP---LDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFE 316 (383)
Q Consensus 240 ~~~~~~~~i~~~~g~d~v~d~~g~~---~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (383)
++. +..++|+|||++|+. .....+ +++++ ++|+++.+|.+. +. ..+.. ..+
T Consensus 216 ---~~~----~~~g~d~viD~~G~~~~~~~~~~~-~~~l~--~~G~iv~~G~~~-----------~~--~~~~~--~~~- 269 (341)
T cd08237 216 ---DIP----EDLAVDHAFECVGGRGSQSAINQI-IDYIR--PQGTIGLMGVSE-----------YP--VPINT--RMV- 269 (341)
T ss_pred ---hhh----hccCCcEEEECCCCCccHHHHHHH-HHhCc--CCcEEEEEeecC-----------CC--cccCH--HHH-
Confidence 111 223799999999963 233333 88999 999999986321 00 01111 111
Q ss_pred cccccCCccEEEEEEcCCHHHHHHHHHHHHcC-----CcccccceeecCCCH---HHHHHHHhcCCCCCeEEEeC
Q psy9949 317 SGELCKTNTIRWGFFMPIPYAVKEINKFIERG-----QIKPVIDSKYNFCEL---PTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-----~l~~~~~~~~~l~~~---~~a~~~l~~~~~~gkvvl~~ 383 (383)
..++..+. +......+++++++++++++ .++++++++|+++++ +++|+.+.++ ..||+||++
T Consensus 270 ---~~k~~~i~-g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~ 339 (341)
T cd08237 270 ---LEKGLTLV-GSSRSTREDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEW 339 (341)
T ss_pred ---hhCceEEE-EecccCHHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEe
Confidence 12222222 22333467899999999998 577788999998655 5555544443 679999874
No 32
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=3.1e-39 Score=304.38 Aligned_cols=305 Identities=20% Similarity=0.290 Sum_probs=237.1
Q ss_pred EEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCceeE
Q psy9949 30 WQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCG 109 (383)
Q Consensus 30 ~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G 109 (383)
+++.+++++ ++++ +.|.|+++++||+|||.++|||++|++...+.. .....+|.++|||++|
T Consensus 2 ~~~~~~g~~--~~~~-~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~---------------~~~~~~p~i~GhE~~G 63 (349)
T TIGR03201 2 WMMTEPGKP--MVKT-RVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGV---------------RTNHALPLALGHEISG 63 (349)
T ss_pred ceEecCCCC--ceEE-eccCCCCCCCeEEEEEEEEeecccchHHHcCCC---------------CccCCCCeeccccceE
Confidence 455666654 6778 899999999999999999999999998774320 1123568899999999
Q ss_pred EEEecCCCCCCCCCCCEEEEe----------e--------------cCCCCCCceEEEeecCcccccCCC------CCCH
Q psy9949 110 KIVAKGPRVTDLNIDDVVYGV----------I--------------QPHKQGSFSKLILADSALVHKKPS------NISD 159 (383)
Q Consensus 110 ~Vv~vG~~v~~~~~Gd~V~~~----------~--------------~~~~~g~~a~~~~v~~~~~~~ip~------~~~~ 159 (383)
+|+++|++++.+ +||||+.. | +...+|+|+||+.++.+.++++|+ ++++
T Consensus 64 ~V~~vG~~v~~~-~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~ 142 (349)
T TIGR03201 64 RVIQAGAGAASW-IGKAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPL 142 (349)
T ss_pred EEEEeCCCcCCC-CCCEEEECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCH
Confidence 999999999887 99999862 1 111359999999999999999999 8999
Q ss_pred HHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeee
Q psy9949 160 EEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVID 238 (383)
Q Consensus 160 ~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~ 238 (383)
++++.+++++.|||+++. ...+ +++++|+|+|+ |++|++++|+|+.+|++|++++++ ++.++++++|++.+++
T Consensus 143 ~~~a~~~~~~~ta~~a~~-~~~~----~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~~i~ 216 (349)
T TIGR03201 143 EHVSVVADAVTTPYQAAV-QAGL----KKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLN 216 (349)
T ss_pred HHhhhhcchHHHHHHHHH-hcCC----CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceEec
Confidence 999999999999999997 4667 89999999996 999999999999999999988854 5778889999999888
Q ss_pred CCCh---HHHHHHhcC---CCcc----EEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHH
Q psy9949 239 YNEP---EAMHSIAGA---GPYD----VILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAF 308 (383)
Q Consensus 239 ~~~~---~~~~~i~~~---~g~d----~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~ 308 (383)
+.+. ++.+.+.+. .|+| ++|||+|+......+ +++++ ++|+++.+|.+... . .+
T Consensus 217 ~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~-~~~l~--~~G~iv~~G~~~~~-----------~--~~ 280 (349)
T TIGR03201 217 PKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESA-LSLLS--HGGTLVVVGYTMAK-----------T--EY 280 (349)
T ss_pred CccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHH-HHHHh--cCCeEEEECcCCCC-----------c--cc
Confidence 7653 455555432 3665 899999987765443 88999 99999998643110 0 11
Q ss_pred HHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 309 DLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
++. .+ ..++..+ .+......++++++++++++|++++ +++ .|+|+++++||+.+.+++..||++++.
T Consensus 281 ~~~--~~----~~~~~~~-~g~~~~~~~~~~~~~~~i~~g~i~~~~~i~-~~~l~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 281 RLS--NL----MAFHARA-LGNWGCPPDRYPAALDLVLDGKIQLGPFVE-RRPLDQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred CHH--HH----hhcccEE-EEEecCCHHHHHHHHHHHHcCCCCcccceE-EecHHHHHHHHHHHHcCCccceEEecC
Confidence 111 11 1111111 2333345678999999999999865 444 799999999999999999899999863
No 33
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=4.8e-39 Score=300.90 Aligned_cols=312 Identities=20% Similarity=0.252 Sum_probs=238.5
Q ss_pred ceeeEEEeec--CCC--ceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCc
Q psy9949 26 RTAAWQISSY--GGA--DELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPL 101 (383)
Q Consensus 26 ~~~a~~~~~~--g~~--~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~ 101 (383)
.|++|++.+. |++ +.++++ +.+.|+|+++||+|||.++|||+.|...... ...+|.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~-~~~~p~~~~~evlVkv~a~~in~~~~~~~~~-------------------~~~~p~ 61 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELV-EEELPPLKDGEVLCEALFLSVDPYMRPYSKR-------------------LNEGDT 61 (329)
T ss_pred CceEEEEecCCCCCCCccceEEE-ecCCCCCCCCcEEEEEEEEecCHHHhccccc-------------------CCCCCc
Confidence 5899999983 554 778999 8999999999999999999999876542111 123578
Q ss_pred cccCceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCc---ccccCCCCCC-----HHHHHhhhHHHHHHH
Q psy9949 102 TLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSA---LVHKKPSNIS-----DEEAAGVLYTGLTAW 173 (383)
Q Consensus 102 ~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~---~~~~ip~~~~-----~~~aa~l~~~~~tA~ 173 (383)
++|+|++|+|++ .+++|++||||+++ ++|++|++++.+ .++++|++++ ...+++++++++|||
T Consensus 62 v~G~e~~G~V~~---~~~~~~~Gd~V~~~------~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~ 132 (329)
T cd08294 62 MIGTQVAKVIES---KNSKFPVGTIVVAS------FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAY 132 (329)
T ss_pred EecceEEEEEec---CCCCCCCCCEEEee------CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHH
Confidence 999999999995 44679999999875 579999999999 9999999998 233446788999999
Q ss_pred HHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcC-
Q psy9949 174 SALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGA- 251 (383)
Q Consensus 174 ~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~- 251 (383)
+++.+.+++ ++|++|+|+|++|++|++++|+|+.+|++|++++++ ++.++++++|++.++++++.++.+++++.
T Consensus 133 ~al~~~~~~----~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~ 208 (329)
T cd08294 133 FGLLEICKP----KAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEALKEAA 208 (329)
T ss_pred HHHHHhcCC----CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHC
Confidence 999878888 999999999999999999999999999999999855 56788899999999999888887777543
Q ss_pred -CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEE
Q psy9949 252 -GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGF 330 (383)
Q Consensus 252 -~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (383)
.++|++||++|+...... +++++ ++|+++.+|........... ........+.+ . ...+.+... ..
T Consensus 209 ~~gvd~vld~~g~~~~~~~--~~~l~--~~G~iv~~g~~~~~~~~~~~-~~~~~~~~~~~--~----~~~l~~~~~--~~ 275 (329)
T cd08294 209 PDGIDCYFDNVGGEFSSTV--LSHMN--DFGRVAVCGSISTYNDKEPK-KGPYVQETIIF--K----QLKMEGFIV--YR 275 (329)
T ss_pred CCCcEEEEECCCHHHHHHH--HHhhc--cCCEEEEEcchhccCCCCCC-cCcccHHHHhh--h----cceEEEEEh--hh
Confidence 479999999998665555 89999 99999998642111100000 00000001111 1 111111100 00
Q ss_pred E-cCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 331 F-MPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 331 ~-~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
. ....+.++++++++++|++++.+..+|+++++++|++.+.+++..||+|+++
T Consensus 276 ~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 276 WQDRWPEALKQLLKWIKEGKLKYREHVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred hHHHHHHHHHHHHHHHHCCCCcCCcccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 0 1124567889999999999877666799999999999999999999999985
No 34
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=8.6e-39 Score=299.68 Aligned_cols=307 Identities=22% Similarity=0.333 Sum_probs=247.8
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
|||+++.++++. ++++ +.+.|+++++||+||+.++++|++|+....|. .+...+|.++|||
T Consensus 1 m~a~~~~~~~~~--~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~----------------~~~~~~p~~~g~e 61 (333)
T cd08296 1 YKAVQVTEPGGP--LELV-ERDVPLPGPGEVLIKVEACGVCHSDAFVKEGA----------------MPGLSYPRVPGHE 61 (333)
T ss_pred CeEEEEccCCCC--ceEE-eccCCCCCCCEEEEEEEEEecchHHHHHHhCC----------------CCCCCCCcccCcc
Confidence 789999987543 7888 89999999999999999999999999988875 1123457899999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeec-------------------------CCCCCCceEEEeecCcccccCCCCCCHHH
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQ-------------------------PHKQGSFSKLILADSALVHKKPSNISDEE 161 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~-------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~ 161 (383)
++|+|+++|++++++++||+|++... ...+|+|++|+.++.+.++++|+++++++
T Consensus 62 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~ 141 (333)
T cd08296 62 VVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAE 141 (333)
T ss_pred eeEEEEEECCCCccCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHH
Confidence 99999999999999999999986210 11258999999999999999999999999
Q ss_pred HHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCC
Q psy9949 162 AAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYN 240 (383)
Q Consensus 162 aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~ 240 (383)
++.++++++|||+++.. .++ +++++|+|+| +|++|++++++|+.+|++|++++++ ++.++++++|+++++++.
T Consensus 142 aa~l~~~~~ta~~~~~~-~~~----~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~ 215 (333)
T cd08296 142 AAPLLCAGVTTFNALRN-SGA----KPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLARKLGAHHYIDTS 215 (333)
T ss_pred hhhhhhhhHHHHHHHHh-cCC----CCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHcCCcEEecCC
Confidence 99999999999999974 477 8999999999 8999999999999999999999865 567888999999999988
Q ss_pred ChHHHHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccc
Q psy9949 241 EPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGEL 320 (383)
Q Consensus 241 ~~~~~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (383)
..++.+.+.+..++|+++|++|........ +++++ ++|+++.++.... ..++.... +.
T Consensus 216 ~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~-~~~l~--~~G~~v~~g~~~~---------------~~~~~~~~----~~ 273 (333)
T cd08296 216 KEDVAEALQELGGAKLILATAPNAKAISAL-VGGLA--PRGKLLILGAAGE---------------PVAVSPLQ----LI 273 (333)
T ss_pred CccHHHHHHhcCCCCEEEECCCchHHHHHH-HHHcc--cCCEEEEEecCCC---------------CCCcCHHH----Hh
Confidence 777777776667899999998755443333 88999 9999999864320 00111110 11
Q ss_pred cCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949 321 CKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382 (383)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~ 382 (383)
.++..+. +......+++..++++++++++++.+ +.|+++++.+|++.+.+++..||+|++
T Consensus 274 ~~~~~i~-~~~~~~~~~~~~~~~~~~~~~l~~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 274 MGRKSIH-GWPSGTALDSEDTLKFSALHGVRPMV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred hcccEEE-EeCcCCHHHHHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 2222222 22234567889999999999988775 589999999999999999999999985
No 35
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=3.5e-39 Score=303.88 Aligned_cols=313 Identities=18% Similarity=0.219 Sum_probs=230.4
Q ss_pred CceeEeeccccCCCCC-CCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCceeEEEEecCC
Q psy9949 38 ADELQFNDNVKTPILK-SKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGP 116 (383)
Q Consensus 38 ~~~l~~~~~~~~p~~~-~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~Vv~vG~ 116 (383)
++.++++ +.+.|+|. ++||||||.++|||+.|+........ . .....+|.++|||++|+|+++|+
T Consensus 20 ~~~~~~~-~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~------~-------~~~~~~~~~~G~e~~G~V~~vG~ 85 (345)
T cd08293 20 AENFRVE-ECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTG------T-------DYLAPWQLSQVLDGGGVGVVEES 85 (345)
T ss_pred ccceEEE-eccCCCCCCCCeEEEEEEEEecCHHHHhhcccccc------c-------ccCCCccCCCceEeeEEEEEecc
Confidence 4668888 89999875 99999999999999999754322100 0 01124678899999999999999
Q ss_pred CCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHH----HHhhhHHHHHHHHHHHHhhhcCccCCCC--C
Q psy9949 117 RVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEE----AAGVLYTGLTAWSALQITAALGLVYPRD--K 190 (383)
Q Consensus 117 ~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~----aa~l~~~~~tA~~~l~~~~~~~~~~~~~--~ 190 (383)
++++|++||+|+++. ++|+||++++.+.++++|+++++.+ +++++.+++|||+++.+.+++ +++ +
T Consensus 86 ~v~~~~~Gd~V~~~~-----~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~----~~g~~~ 156 (345)
T cd08293 86 KHQKFAVGDIVTSFN-----WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHI----TPGANQ 156 (345)
T ss_pred CCCCCCCCCEEEecC-----CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccC----CCCCCC
Confidence 999999999998763 6899999999999999999864322 456677899999999877777 776 9
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHHh-cCCCeeeeCCChHHHHHHhcC--CCccEEEEcCCCCc
Q psy9949 191 RVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVTS-LNPNLVIDYNEPEAMHSIAGA--GPYDVILDAAGIPL 265 (383)
Q Consensus 191 ~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~~-lg~~~v~~~~~~~~~~~i~~~--~g~d~v~d~~g~~~ 265 (383)
+|||+|++|++|++++|+|+++|+ +|++++++ ++.+++++ +|++.++++++.++.+.+.+. .++|++||++|+..
T Consensus 157 ~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~~~ 236 (345)
T cd08293 157 TMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGGEI 236 (345)
T ss_pred EEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCcHH
Confidence 999999999999999999999999 89999865 45677765 999999999887777776543 57999999999876
Q ss_pred ccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEE-cCCHHHHHHHHHH
Q psy9949 266 DQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFF-MPIPYAVKEINKF 344 (383)
Q Consensus 266 ~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l 344 (383)
.... +++++ ++|+++.+|.......+ ...... ............ .... ..+..... ....+.+++++++
T Consensus 237 ~~~~--~~~l~--~~G~iv~~G~~~~~~~~-~~~~~~-~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~l 306 (345)
T cd08293 237 SDTV--ISQMN--ENSHIILCGQISQYNKD-VPYPPP-LPEATEAILKER--NITR--ERFLVLNYKDKFEEAIAQLSQW 306 (345)
T ss_pred HHHH--HHHhc--cCCEEEEEeeeecccCc-cCcccc-ccchhHHHhhhc--ceEE--EEEEeeccHhHHHHHHHHHHHH
Confidence 5444 89999 99999998632110000 000000 000000000000 1010 00000000 1124567888899
Q ss_pred HHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 345 IERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 345 ~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
+++|++++.+..+++++++++|++.+.+++..||+|+++
T Consensus 307 ~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 307 VKEGKLKVKETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred HHCCCccceeEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 999999877666679999999999999999899999975
No 36
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=3.6e-39 Score=302.83 Aligned_cols=318 Identities=19% Similarity=0.239 Sum_probs=238.5
Q ss_pred ceeeEEEeecCCCceeEeeccccC----CCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCc
Q psy9949 26 RTAAWQISSYGGADELQFNDNVKT----PILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPL 101 (383)
Q Consensus 26 ~~~a~~~~~~g~~~~l~~~~~~~~----p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~ 101 (383)
.+++|....+. ++.|+++ +.++ |+|+++||||||++++||+.|+....|... ....+|+
T Consensus 7 ~~~~~~~~~~~-~~~~~~~-~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~---------------~~~~~p~ 69 (338)
T cd08295 7 ILKAYVTGFPK-ESDLELR-TTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDD---------------SLYLPPF 69 (338)
T ss_pred EEecCCCCCCC-ccceEEE-EecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCc---------------cccCCCc
Confidence 46677754443 5678888 7877 889999999999999999999998887511 1124577
Q ss_pred cccCce--eEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecC-cccccCC-CCCCHH-HHHhhhHHHHHHHHHH
Q psy9949 102 TLGRDF--CGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADS-ALVHKKP-SNISDE-EAAGVLYTGLTAWSAL 176 (383)
Q Consensus 102 ~~G~e~--~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~-~~~~~ip-~~~~~~-~aa~l~~~~~tA~~~l 176 (383)
++|++. .|.+..+|+++++|++||+|+++ |+|+||+++|. ..++++| +++++. ++++++++++|||+++
T Consensus 70 ~~g~~~~g~~~~~~v~~~v~~~~vGd~V~~~------g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l 143 (338)
T cd08295 70 KPGEVITGYGVAKVVDSGNPDFKVGDLVWGF------TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGF 143 (338)
T ss_pred CCCCeEeccEEEEEEecCCCCCCCCCEEEec------CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHH
Confidence 888754 45666678888899999999876 78999999999 7999995 678887 7999999999999999
Q ss_pred HHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHh-cCCCeeeeCCC-hHHHHHHhcC--
Q psy9949 177 QITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTS-LNPNLVIDYNE-PEAMHSIAGA-- 251 (383)
Q Consensus 177 ~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~-lg~~~v~~~~~-~~~~~~i~~~-- 251 (383)
.+.+++ ++|++|+|+|++|++|++++|+|+.+|++|++++++ ++.+++++ +|+++++++++ .++.+.+...
T Consensus 144 ~~~~~~----~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~ 219 (338)
T cd08295 144 YEVCKP----KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFP 219 (338)
T ss_pred HHhcCC----CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCC
Confidence 878888 999999999999999999999999999999998855 56678877 99999998764 4666665542
Q ss_pred CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEE
Q psy9949 252 GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFF 331 (383)
Q Consensus 252 ~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (383)
.++|++||++|+...... +++++ ++|+++.+|.......... ..... ...+.. +...+.+.... ...
T Consensus 220 ~gvd~v~d~~g~~~~~~~--~~~l~--~~G~iv~~G~~~~~~~~~~---~~~~~-~~~~~~----~~~~i~g~~~~-~~~ 286 (338)
T cd08295 220 NGIDIYFDNVGGKMLDAV--LLNMN--LHGRIAACGMISQYNLEWP---EGVRN-LLNIIY----KRVKIQGFLVG-DYL 286 (338)
T ss_pred CCcEEEEECCCHHHHHHH--HHHhc--cCcEEEEecccccCCCCCC---CCccC-HHHHhh----ccceeeEEEeh-hhH
Confidence 579999999998655554 89999 9999999864211100000 00000 001111 11111111000 000
Q ss_pred cCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 332 MPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 332 ~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
....+.++++++++++|++++.+...|+++++++|++.+.+++..||+|+++
T Consensus 287 ~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 287 HRYPEFLEEMSGYIKEGKLKYVEDIADGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred HHHHHHHHHHHHHHHCCCeEceeecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 0114567889999999999887767799999999999999999999999975
No 37
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=4.6e-39 Score=300.54 Aligned_cols=303 Identities=20% Similarity=0.225 Sum_probs=229.1
Q ss_pred CCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCceeEEEEecC
Q psy9949 36 GGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKG 115 (383)
Q Consensus 36 g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~Vv~vG 115 (383)
..++.|+++ +.+.|+|++|||||||.++|||+.++ .|.. .....|.++|.|++|+|+++|
T Consensus 14 ~~~~~l~~~-~~~~p~~~~~evlv~v~a~~~n~~~~---~g~~----------------~~~~~~~i~G~~~~g~v~~~~ 73 (325)
T TIGR02825 14 PTDSDFELK-TVELPPLNNGEVLLEALFLSVDPYMR---VAAK----------------RLKEGDTMMGQQVARVVESKN 73 (325)
T ss_pred CCCCceEEE-eccCCCCCCCcEEEEEEEEecCHHHh---cccC----------------cCCCCCcEecceEEEEEEeCC
Confidence 346778888 89999999999999999999999654 3320 112246799999999999987
Q ss_pred CCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccC----CCCCCHHHH-HhhhHHHHHHHHHHHHhhhcCccCCCCC
Q psy9949 116 PRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKK----PSNISDEEA-AGVLYTGLTAWSALQITAALGLVYPRDK 190 (383)
Q Consensus 116 ~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~i----p~~~~~~~a-a~l~~~~~tA~~~l~~~~~~~~~~~~~~ 190 (383)
+ +|++||||+++ ++|++|++++.+.+.++ |++++++++ ++++++++|||+++.+.+++ ++++
T Consensus 74 ~---~~~~GdrV~~~------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~----~~g~ 140 (325)
T TIGR02825 74 V---ALPKGTIVLAS------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGV----KGGE 140 (325)
T ss_pred C---CCCCCCEEEEe------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCC----CCCC
Confidence 4 59999999986 46999999999887777 999999998 67889999999999878888 9999
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCCh-HHHHHHhcC--CCccEEEEcCCCCcc
Q psy9949 191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEP-EAMHSIAGA--GPYDVILDAAGIPLD 266 (383)
Q Consensus 191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~-~~~~~i~~~--~g~d~v~d~~g~~~~ 266 (383)
+|||+|++|++|++++|+|+..|++|++++++ ++.++++++|++.++++++. ++.+.+... +++|++||++|+...
T Consensus 141 ~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~~~ 220 (325)
T TIGR02825 141 TVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFS 220 (325)
T ss_pred EEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCHHHH
Confidence 99999999999999999999999999999855 56788899999999998764 455544432 479999999998766
Q ss_pred cccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHH
Q psy9949 267 QINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIE 346 (383)
Q Consensus 267 ~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 346 (383)
... +++++ ++|+++.+|........ ...........+.+ . ...+.+............+.+++++++++
T Consensus 221 ~~~--~~~l~--~~G~iv~~G~~~~~~~~-~~~~~~~~~~~~~~--~----~~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 289 (325)
T TIGR02825 221 NTV--IGQMK--KFGRIAICGAISTYNRT-GPLPPGPPPEIVIY--Q----ELRMEGFIVNRWQGEVRQKALKELLKWVL 289 (325)
T ss_pred HHH--HHHhC--cCcEEEEecchhhcccC-CCCCCCcchHHHhh--h----cceEeEEEehhhhhhhhHHHHHHHHHHHH
Confidence 554 89999 99999998642110000 00000000001111 1 11111110000000112457899999999
Q ss_pred cCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949 347 RGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382 (383)
Q Consensus 347 ~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~ 382 (383)
+|++++.+..+|+++++++|++.+.+++..||+|++
T Consensus 290 ~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 290 EGKIQYKEYVIEGFENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred CCCcccceeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence 999988777789999999999999999999999975
No 38
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=5.9e-39 Score=308.40 Aligned_cols=320 Identities=15% Similarity=0.174 Sum_probs=234.7
Q ss_pred cceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHh-ccCCcchhhhhhcccccCCCCCCCCCccc
Q psy9949 25 TRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAML-GGYGNVVLNSLRQLETCSVEPVLEFPLTL 103 (383)
Q Consensus 25 ~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~p~~~ 103 (383)
|+||++++..++ .++++ +.|.|+++++||+|||.++|||++|++.+ .|.... ..+ .....+|.++
T Consensus 1 m~~~a~~~~~~~---~l~~~-e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~------~~~----~~~~~~p~i~ 66 (410)
T cd08238 1 MKTKAWRMYGKG---DLRLE-KFELPEIADDEILVRVISDSLCFSTWKLALQGSDHK------KVP----NDLAKEPVIL 66 (410)
T ss_pred CCcEEEEEEcCC---ceEEE-ecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccc------cCc----ccccCCCcee
Confidence 468999998765 37888 89999999999999999999999999976 443100 000 0112468899
Q ss_pred cCceeEEEEecCCCCC-CCCCCCEEEEeec-------------CCCCCCceEEEeecCc----ccccCCCCCCHHHHHhh
Q psy9949 104 GRDFCGKIVAKGPRVT-DLNIDDVVYGVIQ-------------PHKQGSFSKLILADSA----LVHKKPSNISDEEAAGV 165 (383)
Q Consensus 104 G~e~~G~Vv~vG~~v~-~~~~Gd~V~~~~~-------------~~~~g~~a~~~~v~~~----~~~~ip~~~~~~~aa~l 165 (383)
|||++|+|+++|++++ +|++||||++... ...+|+|+||++++.+ .++++|+++++++++.+
T Consensus 67 GhE~~G~V~~vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~ 146 (410)
T cd08238 67 GHEFAGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLV 146 (410)
T ss_pred ccccEEEEEEeCCCccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhc
Confidence 9999999999999998 5999999987521 1135999999999987 68999999999999865
Q ss_pred hHHH--HHHHHHH--------HHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC---EEEEEecC-chHHHHHhc
Q psy9949 166 LYTG--LTAWSAL--------QITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI---EVVTTCSG-DAKDLVTSL 231 (383)
Q Consensus 166 ~~~~--~tA~~~l--------~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~---~Vi~~~~~-~~~~~~~~l 231 (383)
.... .+++.++ ...+++ +++++|+|+|++|++|++++|+|+.+|+ +|++++++ ++.++++++
T Consensus 147 epl~~~~~~~~a~~~~~~~~~~~~~~~----~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~ 222 (410)
T cd08238 147 EPLSCVIGAYTANYHLQPGEYRHRMGI----KPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRL 222 (410)
T ss_pred chHHHHHHHhhhcccccccchhhhcCC----CCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHh
Confidence 2211 2244332 234666 8999999999899999999999999754 79988854 567888886
Q ss_pred --------CCC-eeeeCCC-hHHHHHHhc---CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCC
Q psy9949 232 --------NPN-LVIDYNE-PEAMHSIAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLG 298 (383)
Q Consensus 232 --------g~~-~v~~~~~-~~~~~~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~ 298 (383)
|++ .++++++ .++.+.+.+ ..++|++||++|+......+ +++++ ++|+++.++......
T Consensus 223 ~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a-~~~l~--~~G~~v~~~g~~~~~----- 294 (410)
T cd08238 223 FPPEAASRGIELLYVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEA-DTLLA--PDGCLNFFAGPVDKN----- 294 (410)
T ss_pred ccccccccCceEEEECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHH-HHHhc--cCCeEEEEEccCCCC-----
Confidence 666 4677654 456665543 34799999999876654443 88999 999888764311000
Q ss_pred CchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcCCCC
Q psy9949 299 LVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQGHLR 376 (383)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~~~~ 376 (383)
....+++.. +..++..+ .+......++++++++++++|++++ +++++|+|+++++|++.+. ++..
T Consensus 295 -----~~~~~~~~~------~~~~~~~i-~g~~~~~~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~ 361 (410)
T cd08238 295 -----FSAPLNFYN------VHYNNTHY-VGTSGGNTDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPG 361 (410)
T ss_pred -----ccccccHHH------hhhcCcEE-EEeCCCCHHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCC
Confidence 000111111 12222222 2333446788999999999999977 6899999999999999998 7778
Q ss_pred CeEEEeC
Q psy9949 377 GKIILNA 383 (383)
Q Consensus 377 gkvvl~~ 383 (383)
||+||..
T Consensus 362 gKvvl~~ 368 (410)
T cd08238 362 GKKLIYT 368 (410)
T ss_pred ceEEEEC
Confidence 9999863
No 39
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=2e-38 Score=296.03 Aligned_cols=310 Identities=21% Similarity=0.232 Sum_probs=247.9
Q ss_pred eeeEEEeecCCC-ceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949 27 TAAWQISSYGGA-DELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR 105 (383)
Q Consensus 27 ~~a~~~~~~g~~-~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~ 105 (383)
||++++.++++| +.++++ ++|.|.+.++||+|||.++++|++|+....|..+ .....|.++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~---------------~~~~~p~~~G~ 64 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIG-EVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYG---------------YKPELPAIGGS 64 (324)
T ss_pred CeeEEEccCCChhHeEEEe-ecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCC---------------CCCCCCCCCCc
Confidence 689999887765 458888 8999999999999999999999999998877511 12335789999
Q ss_pred ceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCcc
Q psy9949 106 DFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLV 185 (383)
Q Consensus 106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~ 185 (383)
|++|+|+++|++++++++||+|+++.. .|+|++|+.++.+.++++|+++++++++.+++...|||+++. ..++
T Consensus 65 e~~G~V~~~G~~v~~~~~Gd~V~~~~~---~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~~-~~~~--- 137 (324)
T cd08292 65 EAVGVVDAVGEGVKGLQVGQRVAVAPV---HGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLLD-FLGV--- 137 (324)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEeccC---CCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHHH-hhCC---
Confidence 999999999999999999999998752 499999999999999999999999999999988999999985 5777
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcC---CCccEEEEcC
Q psy9949 186 YPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVILDAA 261 (383)
Q Consensus 186 ~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v~d~~ 261 (383)
+++++|+|+|++|++|++++++|+++|+++++++++ ++.+.++++|++.++++++.++.+.+.+. .++|++||++
T Consensus 138 -~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~ 216 (324)
T cd08292 138 -KPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSV 216 (324)
T ss_pred -CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECC
Confidence 899999999999999999999999999999999855 45667777899999988887777766543 4799999999
Q ss_pred CCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEc---------
Q psy9949 262 GIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFM--------- 332 (383)
Q Consensus 262 g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 332 (383)
|+...... +++++ ++|+++.+|.... .... +++.. ...++..+......
T Consensus 217 g~~~~~~~--~~~l~--~~g~~v~~g~~~~---~~~~---------~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 274 (324)
T cd08292 217 GGKLAGEL--LSLLG--EGGTLVSFGSMSG---EPMQ---------ISSGD------LIFKQATVRGFWGGRWSQEMSVE 274 (324)
T ss_pred CChhHHHH--HHhhc--CCcEEEEEecCCC---CCCc---------CCHHH------HhhCCCEEEEEEcHHhhhhcCHH
Confidence 98765544 89999 9999999864310 0000 01000 01111222111110
Q ss_pred CCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949 333 PIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382 (383)
Q Consensus 333 ~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~ 382 (383)
...+.+.++++++++|.+++.+.+.|+++++.+|++.+.++...||+++.
T Consensus 275 ~~~~~~~~~~~l~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 275 YRKRMIAELLTLALKGQLLLPVEAVFDLGDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred HHHHHHHHHHHHHHCCCccCccccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence 12457889999999999986667889999999999999988888999874
No 40
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=1.8e-38 Score=299.70 Aligned_cols=316 Identities=22% Similarity=0.306 Sum_probs=241.4
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
|||+++.+++ .++++ +++.|+++++||+||+.++++|++|++...+....... .+. .+.....+|.++|||
T Consensus 1 mka~~~~~~~---~l~~~-~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~-~~~----~~~~~~~~p~i~G~e 71 (351)
T cd08233 1 MKAARYHGRK---DIRVE-EVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPT-EGH----PHLTGETAPVTLGHE 71 (351)
T ss_pred CceEEEecCC---ceEEE-eccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccc-ccc----ccccccCCCceeccc
Confidence 7899998754 47888 89999999999999999999999999876542100000 000 000112368899999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeec------------------------C-CCCCCceEEEeecCcccccCCCCCCHHH
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQ------------------------P-HKQGSFSKLILADSALVHKKPSNISDEE 161 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~------------------------~-~~~g~~a~~~~v~~~~~~~ip~~~~~~~ 161 (383)
++|+|+++|+++++|++||+|++... . ..+|+|++|+.++.+.++++|+++++++
T Consensus 72 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~ 151 (351)
T cd08233 72 FSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEE 151 (351)
T ss_pred ceEEEEEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHH
Confidence 99999999999999999999987321 0 1259999999999999999999999999
Q ss_pred HHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHHhcCCCeeeeC
Q psy9949 162 AAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVTSLNPNLVIDY 239 (383)
Q Consensus 162 aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~~lg~~~v~~~ 239 (383)
++.+ .++.|||+++ ...++ +++++|+|+| +|++|++++|+|+.+|+ +|++++++ ++.++++++|++.++++
T Consensus 152 aa~~-~~~~ta~~~l-~~~~~----~~g~~vlI~g-~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 224 (351)
T cd08233 152 AALV-EPLAVAWHAV-RRSGF----KPGDTALVLG-AGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDP 224 (351)
T ss_pred hhhc-cHHHHHHHHH-HhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECC
Confidence 9876 5678999999 57777 8999999998 69999999999999999 88888754 56778888999999998
Q ss_pred CChHHHHHHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhc
Q psy9949 240 NEPEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFE 316 (383)
Q Consensus 240 ~~~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (383)
++.++.+++.+. .++|++||++|+....... +++++ ++|+++.+|... .. ..+....+
T Consensus 225 ~~~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~-~~~l~--~~G~~v~~g~~~-~~--------------~~~~~~~~- 285 (351)
T cd08233 225 TEVDVVAEVRKLTGGGGVDVSFDCAGVQATLDTA-IDALR--PRGTAVNVAIWE-KP--------------ISFNPNDL- 285 (351)
T ss_pred CccCHHHHHHHHhCCCCCCEEEECCCCHHHHHHH-HHhcc--CCCEEEEEccCC-CC--------------CccCHHHH-
Confidence 887787777543 3699999999975443332 88999 999999986431 00 01111111
Q ss_pred cccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcc--cccceeecCCCH-HHHHHHHhcCCCC-CeEEE
Q psy9949 317 SGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIK--PVIDSKYNFCEL-PTAFEKVQQGHLR-GKIIL 381 (383)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~~~~~~~l~~~-~~a~~~l~~~~~~-gkvvl 381 (383)
..++..+. +......++++++++++++|+++ +.++++|+++++ ++|++.+.+++.. ||+||
T Consensus 286 ---~~~~~~i~-g~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~ 350 (351)
T cd08233 286 ---VLKEKTLT-GSICYTREDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV 350 (351)
T ss_pred ---HhhCcEEE-EEeccCcchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence 11222222 22233467899999999999995 467889999996 7999999988875 89987
No 41
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=5.4e-38 Score=294.67 Aligned_cols=312 Identities=24% Similarity=0.355 Sum_probs=242.7
Q ss_pred eeEEEeec---CCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCcccc
Q psy9949 28 AAWQISSY---GGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLG 104 (383)
Q Consensus 28 ~a~~~~~~---g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G 104 (383)
||+++.++ ++++.++.. +.|.|+++++||+|||+++++|++|+....|.. ....+|.++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~----------------~~~~~~~~~g 63 (336)
T TIGR02817 1 KAVGYKKPLPITDPDALVDI-DLPKPKPGGRDLLVEVKAISVNPVDTKVRARMA----------------PEAGQPKILG 63 (336)
T ss_pred CceeeccccCCCCcccceec-ccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCC----------------CCCCCCcccc
Confidence 57888887 778888888 899999999999999999999999998887751 2234578999
Q ss_pred CceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCc
Q psy9949 105 RDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGL 184 (383)
Q Consensus 105 ~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~ 184 (383)
+|++|+|+++|++++.|++||+|+++......|+|++|++++.+.++++|+++++++++.++++++|||+++....++
T Consensus 64 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~-- 141 (336)
T TIGR02817 64 WDAAGVVVAVGDEVTLFKPGDEVWYAGDIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGI-- 141 (336)
T ss_pred eeeEEEEEEeCCCCCCCCCCCEEEEcCCCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCC--
Confidence 999999999999999999999999875322359999999999999999999999999999999999999999877877
Q ss_pred cCCC-----CCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcC--CCcc
Q psy9949 185 VYPR-----DKRVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGA--GPYD 255 (383)
Q Consensus 185 ~~~~-----~~~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~--~g~d 255 (383)
++ +++|+|+|++|++|++++|+|+.+ |++|++++++ ++.++++++|+++++++.. ++.+++.+. .++|
T Consensus 142 --~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~~g~~~~~~~~~-~~~~~i~~~~~~~vd 218 (336)
T TIGR02817 142 --NDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVLELGAHHVIDHSK-PLKAQLEKLGLEAVS 218 (336)
T ss_pred --CCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHHcCCCEEEECCC-CHHHHHHHhcCCCCC
Confidence 66 899999999999999999999998 9999999865 4667888999999988654 566666543 4799
Q ss_pred EEEEcCCCCc-ccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEE--EEEEc
Q psy9949 256 VILDAAGIPL-DQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIR--WGFFM 332 (383)
Q Consensus 256 ~v~d~~g~~~-~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 332 (383)
+++|++++.. .... +++++ ++|+++.++... .. ... .+..... ...+.... .....
T Consensus 219 ~vl~~~~~~~~~~~~--~~~l~--~~G~~v~~~~~~-------~~----~~~--~~~~~~~----~~~~~~~~~~~~~~~ 277 (336)
T TIGR02817 219 YVFSLTHTDQHFKEI--VELLA--PQGRFALIDDPA-------EL----DIS--PFKRKSI----SLHWEFMFTRSMFQT 277 (336)
T ss_pred EEEEcCCcHHHHHHH--HHHhc--cCCEEEEEcccc-------cc----cch--hhhhcce----EEEEEEeecccccch
Confidence 9999986543 3444 89999 999999874210 00 000 0000000 00000000 00000
Q ss_pred C----CHHHHHHHHHHHHcCCcccccceeec---CCCHHHHHHHHhcCCCCCeEEEe
Q psy9949 333 P----IPYAVKEINKFIERGQIKPVIDSKYN---FCELPTAFEKVQQGHLRGKIILN 382 (383)
Q Consensus 333 ~----~~~~~~~~~~l~~~g~l~~~~~~~~~---l~~~~~a~~~l~~~~~~gkvvl~ 382 (383)
+ ..+.+++++++++++.+++.+.+.++ ++++++|++.+.+++..||++++
T Consensus 278 ~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 278 ADMIEQHHLLNRVARLVDAGKIRTTLAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred hhhhhhHHHHHHHHHHHHCCCeeccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 0 12568899999999999876665664 68899999999999999999875
No 42
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2e-37 Score=292.48 Aligned_cols=328 Identities=27% Similarity=0.350 Sum_probs=247.8
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcc---ccc-CCCCCCCCCcc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQL---ETC-SVEPVLEFPLT 102 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~---~~~-~~~~~~~~p~~ 102 (383)
||++++..++.++.+.+.++.+.|++.+++|+|||.++++|++|+.+..|..+.......+- +-+ .......+|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 68888888777767777634577888999999999999999999998876421000000000 000 00013456889
Q ss_pred ccCceeEEEEecCCCCCCCCCCCEEEEee----------------cCCCCCCceEEEeecCcccccCCCCCCHHHHHhhh
Q psy9949 103 LGRDFCGKIVAKGPRVTDLNIDDVVYGVI----------------QPHKQGSFSKLILADSALVHKKPSNISDEEAAGVL 166 (383)
Q Consensus 103 ~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~----------------~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~ 166 (383)
+|||++|+|+++|+++++|++||+|++.. +...+|+|++|+.++.+.++++|+++++++++.++
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~ 160 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATFP 160 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhcc
Confidence 99999999999999999999999998842 11235999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHH
Q psy9949 167 YTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMH 246 (383)
Q Consensus 167 ~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~ 246 (383)
+++.|||+++ ...++ +++++|+|+|++|++|++++++|+.+|+++++++++++.+.++++|++.+.+.....+.+
T Consensus 161 ~~~~ta~~~~-~~~~~----~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 235 (350)
T cd08274 161 CSYSTAENML-ERAGV----GAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAAKEEAVRALGADTVILRDAPLLAD 235 (350)
T ss_pred cHHHHHHHHH-hhcCC----CCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCchhhHHHHhcCCeEEEeCCCccHHH
Confidence 9999999998 57788 899999999988999999999999999999999876677788889987666554433333
Q ss_pred -HHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCcc
Q psy9949 247 -SIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNT 325 (383)
Q Consensus 247 -~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (383)
......++|++||++|+...... +++++ ++|+++.++... +.. ..+++. . ...++..
T Consensus 236 ~~~~~~~~~d~vi~~~g~~~~~~~--~~~l~--~~G~~v~~g~~~-----------~~~-~~~~~~--~----~~~~~~~ 293 (350)
T cd08274 236 AKALGGEPVDVVADVVGGPLFPDL--LRLLR--PGGRYVTAGAIA-----------GPV-VELDLR--T----LYLKDLT 293 (350)
T ss_pred HHhhCCCCCcEEEecCCHHHHHHH--HHHhc--cCCEEEEecccC-----------Ccc-ccCCHH--H----hhhcceE
Confidence 12223579999999998655555 89999 999999985321 000 001111 1 1122222
Q ss_pred EEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949 326 IRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382 (383)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~ 382 (383)
+. +......+.+.+++++++++++++.+.++|+++++++|++.+.++...||+|++
T Consensus 294 ~~-~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~ 349 (350)
T cd08274 294 LF-GSTLGTREVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLV 349 (350)
T ss_pred EE-EeecCCHHHHHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEe
Confidence 21 223345788999999999999988788899999999999999988888999885
No 43
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=1.5e-37 Score=294.51 Aligned_cols=310 Identities=24% Similarity=0.342 Sum_probs=239.3
Q ss_pred eeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCce
Q psy9949 28 AAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDF 107 (383)
Q Consensus 28 ~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~ 107 (383)
|++++.++++ .++++ +.+.|+++++||+|||.++++|++|+....|.. ....+|.++|||+
T Consensus 2 ka~~~~~~~~--~l~~~-~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~----------------~~~~~p~~~G~e~ 62 (361)
T cd08231 2 RAAVLTGPGK--PLEIR-EVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRR----------------PRVPLPIILGHEG 62 (361)
T ss_pred eEEEEcCCCC--CCEEE-eccCCCCCCCeEEEEEEEEeecCccHHHhcCCC----------------CCCCCCcccccCC
Confidence 6888888774 47888 899999999999999999999999999888761 1135678999999
Q ss_pred eEEEEecCCCCCC------CCCCCEEEEeec-------------------------------CCCCCCceEEEeecCc-c
Q psy9949 108 CGKIVAKGPRVTD------LNIDDVVYGVIQ-------------------------------PHKQGSFSKLILADSA-L 149 (383)
Q Consensus 108 ~G~Vv~vG~~v~~------~~~Gd~V~~~~~-------------------------------~~~~g~~a~~~~v~~~-~ 149 (383)
+|+|+++|+++++ |++||+|+++.. ....|+|++|++++.+ .
T Consensus 63 ~G~V~~vG~~v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~ 142 (361)
T cd08231 63 VGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTA 142 (361)
T ss_pred ceEEEEeCCCccccccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCc
Confidence 9999999999986 999999988621 0125999999999986 7
Q ss_pred cccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHH
Q psy9949 150 VHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDL 227 (383)
Q Consensus 150 ~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~ 227 (383)
++++|++++.+++++++++++|||+++.....+ +++++|||+| +|++|++++++|+.+|+ +|++++++ ++.++
T Consensus 143 ~~~lP~~~~~~~aa~~~~~~~ta~~al~~~~~~----~~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~ 217 (361)
T cd08231 143 IVRVPDNVPDEVAAPANCALATVLAALDRAGPV----GAGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLEL 217 (361)
T ss_pred eEECCCCCCHHHHHHhcCHHHHHHHHHHhccCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH
Confidence 999999999999999989999999999866665 6999999997 79999999999999999 99998855 45678
Q ss_pred HHhcCCCeeeeCCChHHH---HHHhc---CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCch
Q psy9949 228 VTSLNPNLVIDYNEPEAM---HSIAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVP 301 (383)
Q Consensus 228 ~~~lg~~~v~~~~~~~~~---~~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~ 301 (383)
++++|++.+++++..++. ..+.+ ..++|++||++|+......+ +++++ ++|+++.+|...... .
T Consensus 218 ~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~-~~~l~--~~G~~v~~g~~~~~~----~--- 287 (361)
T cd08231 218 AREFGADATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEG-LELLR--RGGTYVLVGSVAPAG----T--- 287 (361)
T ss_pred HHHcCCCeEEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHH-HHHhc--cCCEEEEEcCCCCCC----c---
Confidence 889999988887654332 34433 34799999999875543332 88999 999999986432100 0
Q ss_pred hhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcC--C--cccccceeecCCCHHHHHHHHhcCCCCC
Q psy9949 302 GLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERG--Q--IKPVIDSKYNFCELPTAFEKVQQGHLRG 377 (383)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~--l~~~~~~~~~l~~~~~a~~~l~~~~~~g 377 (383)
.++....+ ..++..+. +......+.++++++++.++ . +..+++++|+++++++||+.+.+++. +
T Consensus 288 ------~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~ 355 (361)
T cd08231 288 ------VPLDPERI----VRKNLTII-GVHNYDPSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-L 355 (361)
T ss_pred ------cccCHHHH----hhcccEEE-EcccCCchhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-e
Confidence 00100001 11222221 22223466788899999887 3 34567889999999999999988774 7
Q ss_pred eEEEeC
Q psy9949 378 KIILNA 383 (383)
Q Consensus 378 kvvl~~ 383 (383)
|+||+.
T Consensus 356 k~vi~~ 361 (361)
T cd08231 356 KVVIDP 361 (361)
T ss_pred EEEeCC
Confidence 999864
No 44
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=3e-37 Score=291.41 Aligned_cols=313 Identities=19% Similarity=0.227 Sum_probs=242.0
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
|||+++.+++. +.++ +.+.|.++++||+|||.++++|++|++...+.. ....+|.++|||
T Consensus 1 mka~~~~~~~~---~~l~-~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~----------------~~~~~~~~~G~e 60 (351)
T cd08285 1 MKAFAMLGIGK---VGWI-EKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGA----------------PGERHGMILGHE 60 (351)
T ss_pred CceEEEccCCc---cEEE-ECCCCCCCCCeEEEEEEEEEechhhHHHhcCCC----------------CCCCCCcccCcc
Confidence 78999988764 5677 788888999999999999999999998887651 123457899999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeec---------------------------CCCCCCceEEEeecCc--ccccCCCCC
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQ---------------------------PHKQGSFSKLILADSA--LVHKKPSNI 157 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~---------------------------~~~~g~~a~~~~v~~~--~~~~ip~~~ 157 (383)
++|+|+++|++++++++||+|++... ...+|+|++|++++.+ .++++|+++
T Consensus 61 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~ 140 (351)
T cd08285 61 AVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGL 140 (351)
T ss_pred eEEEEEEecCCcCccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCC
Confidence 99999999999999999999997421 1135899999999974 899999999
Q ss_pred CHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHHhcCCCe
Q psy9949 158 SDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVTSLNPNL 235 (383)
Q Consensus 158 ~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~~lg~~~ 235 (383)
++++++.++..++|||+++ ....+ +++++|+|+| +|++|++++|+|+.+|+ .|++++++ ++.++++++|++.
T Consensus 141 ~~~~aa~~~~~~~ta~~~~-~~~~~----~~g~~vlI~g-~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~ 214 (351)
T cd08285 141 TDEQAVMLPDMMSTGFHGA-ELANI----KLGDTVAVFG-IGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATD 214 (351)
T ss_pred CHHHhhhhccchhhHHHHH-HccCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCce
Confidence 9999999999999999997 46777 8999999997 79999999999999999 58887755 4667889999999
Q ss_pred eeeCCChHHHHHHhc---CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhh
Q psy9949 236 VIDYNEPEAMHSIAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLK 312 (383)
Q Consensus 236 v~~~~~~~~~~~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (383)
+++++..++.+++.. ..++|+++|++|+....... +++++ ++|+++.++...... ...+ ....+..
T Consensus 215 ~v~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~-~~~l~--~~G~~v~~g~~~~~~--~~~~----~~~~~~~-- 283 (351)
T cd08285 215 IVDYKNGDVVEQILKLTGGKGVDAVIIAGGGQDTFEQA-LKVLK--PGGTISNVNYYGEDD--YLPI----PREEWGV-- 283 (351)
T ss_pred EecCCCCCHHHHHHHHhCCCCCcEEEECCCCHHHHHHH-HHHhh--cCCEEEEecccCCCc--eeec----Chhhhhh--
Confidence 998887777666643 24799999999986543333 88999 999999986432100 0000 0000110
Q ss_pred hhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc---ccceeecCCCHHHHHHHHhcCCC-CCeEEEeC
Q psy9949 313 SNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP---VIDSKYNFCELPTAFEKVQQGHL-RGKIILNA 383 (383)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~---~~~~~~~l~~~~~a~~~l~~~~~-~gkvvl~~ 383 (383)
......+.........++++++++++++|++++ .+.++|+++++++|++.+.+++. .+|++|++
T Consensus 284 -------~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 284 -------GMGHKTINGGLCPGGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred -------hccccEEEEeecCCccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 011112211111224678999999999999887 34567999999999999988874 57999875
No 45
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=2.9e-37 Score=290.32 Aligned_cols=317 Identities=22% Similarity=0.239 Sum_probs=248.7
Q ss_pred eeeEEEeecCCC-ceeEeeccccCCCCCC-CeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCcccc
Q psy9949 27 TAAWQISSYGGA-DELQFNDNVKTPILKS-KDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLG 104 (383)
Q Consensus 27 ~~a~~~~~~g~~-~~l~~~~~~~~p~~~~-~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G 104 (383)
|||+.+.+.+++ +.+.++ +.|.|++.+ ++|+||+.++|+|++|+....|..+.. + ......|.++|
T Consensus 1 ~~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~-------~----~~~~~~~~~~g 68 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLE-SYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIK-------P----PTTPEPPAVGG 68 (341)
T ss_pred CceEEEccCCCchhheEEe-ecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCC-------C----cccCCCCCCCC
Confidence 789999988876 357888 789998887 999999999999999999887751100 0 00012577999
Q ss_pred CceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCc
Q psy9949 105 RDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGL 184 (383)
Q Consensus 105 ~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~ 184 (383)
||++|+|+++|+++..|++||+|++... ..|+|++|+.++.+.++++|+++++++++.+++.++|||+++.....+
T Consensus 69 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~--~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~-- 144 (341)
T cd08290 69 NEGVGEVVKVGSGVKSLKPGDWVIPLRP--GLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKL-- 144 (341)
T ss_pred cceEEEEEEeCCCCCCCCCCCEEEecCC--CCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhccc--
Confidence 9999999999999999999999998752 249999999999999999999999999999999999999999877778
Q ss_pred cCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-----chHHHHHhcCCCeeeeCCCh---HHHHHHhcC--CCc
Q psy9949 185 VYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-----DAKDLVTSLNPNLVIDYNEP---EAMHSIAGA--GPY 254 (383)
Q Consensus 185 ~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-----~~~~~~~~lg~~~v~~~~~~---~~~~~i~~~--~g~ 254 (383)
+++++|+|+|++|++|++++++|+..|+++++++++ ++.+.++++|++.+++++.. ++...+... +++
T Consensus 145 --~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~ 222 (341)
T cd08290 145 --QPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGGRP 222 (341)
T ss_pred --CCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHHcCCCc
Confidence 899999999989999999999999999999999865 34677788999999887765 566666543 279
Q ss_pred cEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEc--
Q psy9949 255 DVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFM-- 332 (383)
Q Consensus 255 d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 332 (383)
|++|||+|+...... +++++ ++|+++.++...... . .+.... ...++..+......
T Consensus 223 d~vld~~g~~~~~~~--~~~l~--~~G~~v~~g~~~~~~-~-----------~~~~~~------~~~~~~~~~~~~~~~~ 280 (341)
T cd08290 223 KLALNCVGGKSATEL--ARLLS--PGGTMVTYGGMSGQP-V-----------TVPTSL------LIFKDITLRGFWLTRW 280 (341)
T ss_pred eEEEECcCcHhHHHH--HHHhC--CCCEEEEEeccCCCC-c-----------ccCHHH------HhhCCceEEEEecHHH
Confidence 999999998765554 89999 999999986421110 0 000000 01111122111100
Q ss_pred -------CCHHHHHHHHHHHHcCCcccccceee---cCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 333 -------PIPYAVKEINKFIERGQIKPVIDSKY---NFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 333 -------~~~~~~~~~~~l~~~g~l~~~~~~~~---~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
...+.+.++++++.++.+.+...+.+ ++++++++++.+.+++..||+|++|
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 281 LKRANPEEKEDMLEELAELIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred HhhcCHHHHHHHHHHHHHHHHcCCccCCcccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 01236888999999999987666667 9999999999999999999999986
No 46
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=7.3e-37 Score=292.97 Aligned_cols=326 Identities=24% Similarity=0.288 Sum_probs=246.7
Q ss_pred cccceeeEEEe--ecCCCc-eeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCC
Q psy9949 23 YSTRTAAWQIS--SYGGAD-ELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEF 99 (383)
Q Consensus 23 ~~~~~~a~~~~--~~g~~~-~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 99 (383)
.|.+|+|+++. +.|++. .++++ +.+.|+++++||+||+.+++||++|++...|.....+. .+. . ......
T Consensus 9 ~~~~~~a~~~~~~~~g~~~~~~~~~-~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~-~~~----~-~~~~~~ 81 (393)
T cd08246 9 VPEKMYAFAIRPERYGDPAQAIQLE-DVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFA-ARQ----R-RGRDEP 81 (393)
T ss_pred CchhhhheeeecccCCCcccceEEe-ecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccc-ccc----c-cCCCCC
Confidence 68899999886 345553 47888 88999999999999999999999999887664110000 000 0 000112
Q ss_pred CccccCceeEEEEecCCCCCCCCCCCEEEEeecC-------------------------CCCCCceEEEeecCcccccCC
Q psy9949 100 PLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQP-------------------------HKQGSFSKLILADSALVHKKP 154 (383)
Q Consensus 100 p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~-------------------------~~~g~~a~~~~v~~~~~~~ip 154 (383)
+.++|||++|+|+++|++++.+++||+|+++... ..+|+|++|++++...++++|
T Consensus 82 ~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP 161 (393)
T cd08246 82 YHIGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKP 161 (393)
T ss_pred ccccccceEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECC
Confidence 3589999999999999999999999999886420 124999999999999999999
Q ss_pred CCCCHHHHHhhhHHHHHHHHHHHHh--hhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhc
Q psy9949 155 SNISDEEAAGVLYTGLTAWSALQIT--AALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSL 231 (383)
Q Consensus 155 ~~~~~~~aa~l~~~~~tA~~~l~~~--~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~l 231 (383)
+++++++++.+++++.|||+++... +++ +++++|+|+|++|++|++++++|+.+|+++++++++ ++.+.++++
T Consensus 162 ~~l~~~~aa~l~~~~~tA~~al~~~~~~~~----~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~~ 237 (393)
T cd08246 162 KHLSWEEAAAYMLVGATAYRMLFGWNPNTV----KPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRAL 237 (393)
T ss_pred CCCCHHHHhhhcccHHHHHHHHhhcccccC----CCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHc
Confidence 9999999999999999999998754 567 899999999988999999999999999998888754 567888899
Q ss_pred CCCeeeeCCCh----------------------HHHHHHhc---CC-CccEEEEcCCCCcccccccccccccCCCceEEE
Q psy9949 232 NPNLVIDYNEP----------------------EAMHSIAG---AG-PYDVILDAAGIPLDQINSYLPFLKTGKFSKFVT 285 (383)
Q Consensus 232 g~~~v~~~~~~----------------------~~~~~i~~---~~-g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~ 285 (383)
|++.+++++.. .+.+.+.+ .. ++|++||++|+...... +++++ ++|+++.
T Consensus 238 G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~--~~~l~--~~G~~v~ 313 (393)
T cd08246 238 GAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTS--VFVCD--RGGMVVI 313 (393)
T ss_pred CCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHH--HHHhc--cCCEEEE
Confidence 99988876432 23344433 23 79999999998554444 89999 9999999
Q ss_pred ecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHH
Q psy9949 286 LRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPT 365 (383)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~ 365 (383)
++...... ..+.+... ..++..+ .+......+++.+++++++++.+.+.++++|+++++++
T Consensus 314 ~g~~~~~~------------~~~~~~~l------~~~~~~i-~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~ 374 (393)
T cd08246 314 CAGTTGYN------------HTYDNRYL------WMRQKRI-QGSHFANDREAAEANRLVMKGRIDPCLSKVFSLDETPD 374 (393)
T ss_pred EcccCCCC------------CCCcHHHH------hhheeEE-EecccCcHHHHHHHHHHHHcCCceeeeeEEEeHHHHHH
Confidence 86431100 00111110 1111111 12222346788999999999999877888999999999
Q ss_pred HHHHHhcC-CCCCeEEEe
Q psy9949 366 AFEKVQQG-HLRGKIILN 382 (383)
Q Consensus 366 a~~~l~~~-~~~gkvvl~ 382 (383)
|++.+.++ +..||+++-
T Consensus 375 a~~~~~~~~~~~gkvvv~ 392 (393)
T cd08246 375 AHQLMHRNQHHVGNMAVL 392 (393)
T ss_pred HHHHHHhCccccceEEEe
Confidence 99999988 788999875
No 47
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=3.5e-37 Score=288.58 Aligned_cols=310 Identities=21% Similarity=0.244 Sum_probs=222.6
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCc-cccC
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPL-TLGR 105 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~-~~G~ 105 (383)
|+++++..+++. ..++ +.+.|.++|+||+|||.++|||+||++.++|..+ ....|. ++||
T Consensus 1 m~a~~~~~~~~~--~~~~-~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~----------------~~~~~~~i~GH 61 (350)
T COG1063 1 MKAAVVYVGGGD--VRLE-EPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEP----------------FVPPGDIILGH 61 (350)
T ss_pred CceeEEEecCCc--cccc-cCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCC----------------CCCCCCcccCc
Confidence 566666665543 2255 6666778899999999999999999999998622 233344 9999
Q ss_pred ceeEEEEecCCCCCCCCCCCEEEEe------------------ec-----------CCCCCCceEEEeecCccccc-CCC
Q psy9949 106 DFCGKIVAKGPRVTDLNIDDVVYGV------------------IQ-----------PHKQGSFSKLILADSALVHK-KPS 155 (383)
Q Consensus 106 e~~G~Vv~vG~~v~~~~~Gd~V~~~------------------~~-----------~~~~g~~a~~~~v~~~~~~~-ip~ 155 (383)
|++|+|+++| .++.+++||||+.. |. ...+|+|+||+.+|.+++++ +|+
T Consensus 62 E~~G~V~evG-~~~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd 140 (350)
T COG1063 62 EFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPD 140 (350)
T ss_pred cceEEEEEec-cccCCCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCC
Confidence 9999999999 77789999999743 11 01469999999999755555 588
Q ss_pred CCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEe-cCchHHHHHh-cC
Q psy9949 156 NISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTC-SGDAKDLVTS-LN 232 (383)
Q Consensus 156 ~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~-~~~~~~~~~~-lg 232 (383)
++ +.+++++..++.+++++....... +++++|+|+| +|++|++++++|+.+|+ +|++++ +++|++++++ .+
T Consensus 141 ~~-~~~~aal~epla~~~~~~a~~~~~----~~~~~V~V~G-aGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g 214 (350)
T COG1063 141 GI-DEEAAALTEPLATAYHGHAERAAV----RPGGTVVVVG-AGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGG 214 (350)
T ss_pred CC-ChhhhhhcChhhhhhhhhhhccCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCC
Confidence 88 455555556778897774334444 5666999999 99999999999999998 788887 4568899988 66
Q ss_pred CCeeeeCCChHHHHHHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHH
Q psy9949 233 PNLVIDYNEPEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFD 309 (383)
Q Consensus 233 ~~~v~~~~~~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (383)
++.+++....+....+.+. .|+|++|||+|.+....++ +++++ ++|+++.+|-+..... ......
T Consensus 215 ~~~~~~~~~~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~a-i~~~r--~gG~v~~vGv~~~~~~---------~~~~~~ 282 (350)
T COG1063 215 ADVVVNPSEDDAGAEILELTGGRGADVVIEAVGSPPALDQA-LEALR--PGGTVVVVGVYGGEDI---------PLPAGL 282 (350)
T ss_pred CeEeecCccccHHHHHHHHhCCCCCCEEEECCCCHHHHHHH-HHHhc--CCCEEEEEeccCCccC---------ccCHHH
Confidence 6666655443444444332 3799999999977655554 88999 9999999864321100 000111
Q ss_pred HhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcCCC-CCeEEEeC
Q psy9949 310 LLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQGHL-RGKIILNA 383 (383)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~~~-~gkvvl~~ 383 (383)
+. .+++.++|. ........++.+++++++|++.+ ++++.++++++++||+.+.+.+. ..|++|+.
T Consensus 283 ~~----~kel~l~gs-----~~~~~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 283 VV----SKELTLRGS-----LRPSGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred HH----hcccEEEec-----cCCCCcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 11 123333332 11134678999999999999865 56889999999999999987554 45888863
No 48
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=1.2e-36 Score=291.76 Aligned_cols=328 Identities=24% Similarity=0.276 Sum_probs=247.9
Q ss_pred CcccceeeEEEee--cCCC-ceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCC
Q psy9949 22 KYSTRTAAWQISS--YGGA-DELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLE 98 (383)
Q Consensus 22 ~~~~~~~a~~~~~--~g~~-~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 98 (383)
.+|.+||||++.. .++| +.+++. +.+.|.+++++|+||++++++|++|++...+.........+. .....
T Consensus 3 ~~~~~~~a~~~~~~~~~~~~~~~~~~-~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~------~~~~~ 75 (398)
T TIGR01751 3 VVPETMYAFAIREERDGDPRQAIQLE-VVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRK------YGRDD 75 (398)
T ss_pred ccchhhhheEEecccCCCcccceEEe-ecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcc------cCCCC
Confidence 3578899999965 6765 568888 899999999999999999999999998776642110000000 00112
Q ss_pred CC-ccccCceeEEEEecCCCCCCCCCCCEEEEeec-------------------------CCCCCCceEEEeecCccccc
Q psy9949 99 FP-LTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQ-------------------------PHKQGSFSKLILADSALVHK 152 (383)
Q Consensus 99 ~p-~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~-------------------------~~~~g~~a~~~~v~~~~~~~ 152 (383)
.| .++|||++|+|+++|++++.|++||+|++.+. ...+|+|++|+.++.+++++
T Consensus 76 ~~~~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~ 155 (398)
T TIGR01751 76 LPFHIIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMP 155 (398)
T ss_pred CCceecccceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEE
Confidence 23 37999999999999999999999999988642 01358999999999999999
Q ss_pred CCCCCCHHHHHhhhHHHHHHHHHHHH--hhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHH
Q psy9949 153 KPSNISDEEAAGVLYTGLTAWSALQI--TAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVT 229 (383)
Q Consensus 153 ip~~~~~~~aa~l~~~~~tA~~~l~~--~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~ 229 (383)
+|+++++++++.+++.+.|||+++.. .+++ +++++|+|+|++|++|++++++|+++|+++++++++ ++.+.++
T Consensus 156 vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~----~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~ 231 (398)
T TIGR01751 156 KPKHLTWEEAACPGLTGATAYRQLVGWNPATV----KPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCR 231 (398)
T ss_pred CCCCCCHHHHhhccchHHHHHHHHhhhhccCC----CCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH
Confidence 99999999999999999999999864 3566 899999999988999999999999999998887744 5667888
Q ss_pred hcCCCeeeeCCCh----------------------HHHHHHhc---CCCccEEEEcCCCCcccccccccccccCCCceEE
Q psy9949 230 SLNPNLVIDYNEP----------------------EAMHSIAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFV 284 (383)
Q Consensus 230 ~lg~~~v~~~~~~----------------------~~~~~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v 284 (383)
++|++.++|+++. .+.+.+.+ ..++|++|||+|+...... +++++ ++|+++
T Consensus 232 ~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~--~~~l~--~~G~~v 307 (398)
T TIGR01751 232 ELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTS--VFVCR--RGGMVV 307 (398)
T ss_pred HcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHH--HHhhc--cCCEEE
Confidence 8999999887542 13333332 2469999999997554444 88999 999999
Q ss_pred EecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHH
Q psy9949 285 TLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELP 364 (383)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~ 364 (383)
.++.+.... .. ++...... +...+.+ ......+++++++++++++++.+.+.+++++++++
T Consensus 308 ~~g~~~~~~-------~~-----~~~~~~~~-~~~~~~~------~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~ 368 (398)
T TIGR01751 308 ICGGTTGYN-------HD-----YDNRYLWM-RQKRIQG------SHFANLREAWEANRLVAKGRIDPTLSKVYPLEEIG 368 (398)
T ss_pred EEccccCCC-------CC-----cCHHHHhh-cccEEEc------cccCcHHHHHHHHHHHHCCCcccceeeEEcHHHHH
Confidence 996532110 00 00000000 0111111 11223556789999999999988888899999999
Q ss_pred HHHHHHhcCCCCCeEEEeC
Q psy9949 365 TAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 365 ~a~~~l~~~~~~gkvvl~~ 383 (383)
++++.+.+++..||+|+++
T Consensus 369 ~a~~~~~~~~~~gkvvv~~ 387 (398)
T TIGR01751 369 QAHQDVHRNHHQGNVAVLV 387 (398)
T ss_pred HHHHHHHcCCCCceEEEEe
Confidence 9999999999999999874
No 49
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=2e-36 Score=282.98 Aligned_cols=317 Identities=23% Similarity=0.289 Sum_probs=249.7
Q ss_pred ceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949 26 RTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR 105 (383)
Q Consensus 26 ~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~ 105 (383)
+||++.+.++|.+..++++ +++.|.++++||+||+.++|+|++|+.+..|.. ....+|.++||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~----------------~~~~~~~~~g~ 63 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAV-EFTPADPAENEVQVENKAIGINYIDTYIRSGLY----------------PPPSLPSGLGT 63 (327)
T ss_pred CceEEEEeccCChhHeEEe-eccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCC----------------CCCCCCCccCc
Confidence 4899999999988889999 899999999999999999999999998887651 12345778999
Q ss_pred ceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCcc
Q psy9949 106 DFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLV 185 (383)
Q Consensus 106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~ 185 (383)
|++|+|+++|++++.+++||+|+++.. ..|+|++|+.++.+.++++|+++++++++.+++.+.+||+++...+++
T Consensus 64 e~~G~v~~vG~~v~~~~~Gd~V~~~~~--~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~--- 138 (327)
T PRK10754 64 EAAGVVSKVGSGVKHIKVGDRVVYAQS--ALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEI--- 138 (327)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEECCC--CCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCC---
Confidence 999999999999999999999986532 248999999999999999999999999999999999999999877888
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcC---CCccEEEEcC
Q psy9949 186 YPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVILDAA 261 (383)
Q Consensus 186 ~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v~d~~ 261 (383)
+++++|+|+|++|.+|++++++|+.+|++|++++++ ++.++++++|++.+++.+..++.+.+... .++|+++||+
T Consensus 139 -~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~ 217 (327)
T PRK10754 139 -KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKKVRVVYDSV 217 (327)
T ss_pred -CCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEECC
Confidence 899999999999999999999999999999998855 45677888999888888777777766543 4799999999
Q ss_pred CCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEc---CCHHHH
Q psy9949 262 GIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFM---PIPYAV 338 (383)
Q Consensus 262 g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 338 (383)
|+...... +++++ ++|+++.++..... ....... . +..... ........ .+... ...+.+
T Consensus 218 ~~~~~~~~--~~~l~--~~g~~v~~g~~~~~---~~~~~~~----~--~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~ 280 (327)
T PRK10754 218 GKDTWEAS--LDCLQ--RRGLMVSFGNASGP---VTGVNLG----I--LNQKGS---LYVTRPSL-QGYITTREELTEAS 280 (327)
T ss_pred cHHHHHHH--HHHhc--cCCEEEEEccCCCC---CCCcCHH----H--HhccCc---eEEeccee-ecccCCHHHHHHHH
Confidence 98655554 88999 99999998643210 0000000 0 000000 00000000 00000 113446
Q ss_pred HHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949 339 KEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQGHLRGKIILN 382 (383)
Q Consensus 339 ~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~ 382 (383)
.++++++++|.+++ ...+.|++++++++++.+.+++..||+||.
T Consensus 281 ~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 281 NELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLI 326 (327)
T ss_pred HHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence 67899999999875 357889999999999999999999999984
No 50
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=1.7e-36 Score=287.40 Aligned_cols=312 Identities=21% Similarity=0.215 Sum_probs=242.0
Q ss_pred cceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCcccc
Q psy9949 25 TRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLG 104 (383)
Q Consensus 25 ~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G 104 (383)
++|||+++.+++++ ++++ +.+.|+++++||+|||.++++|++|++...|.. ...+|.++|
T Consensus 1 ~~~~a~~~~~~~~~--~~~~-~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~-----------------~~~~p~v~G 60 (365)
T cd08278 1 MKTTAAVVREPGGP--FVLE-DVELDDPRPDEVLVRIVATGICHTDLVVRDGGL-----------------PTPLPAVLG 60 (365)
T ss_pred CccEEeeeccCCCc--ceEE-EeecCCCCCCeEEEEEEEeecCcccHHHhcCCC-----------------CCCCCcccc
Confidence 47999999987654 6777 789999999999999999999999999988751 134578999
Q ss_pred CceeEEEEecCCCCCCCCCCCEEEEeec----------------------------------------------CCCCCC
Q psy9949 105 RDFCGKIVAKGPRVTDLNIDDVVYGVIQ----------------------------------------------PHKQGS 138 (383)
Q Consensus 105 ~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~----------------------------------------------~~~~g~ 138 (383)
||++|+|+++|++++++++||+|++... ....|+
T Consensus 61 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 140 (365)
T cd08278 61 HEGAGVVEAVGSAVTGLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSS 140 (365)
T ss_pred cceeEEEEEeCCCcccCCCCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccc
Confidence 9999999999999999999999985210 001489
Q ss_pred ceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEE
Q psy9949 139 FSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVV 217 (383)
Q Consensus 139 ~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi 217 (383)
|++|+.++.++++++|+++++++++.++++++|||+++.....+ +++++|+|+| +|++|++++++|+..|+ +++
T Consensus 141 ~~~y~~v~~~~~~~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~----~~g~~vlI~g-~g~vG~~~~~la~~~G~~~v~ 215 (365)
T cd08278 141 FATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGAVLNVLKP----RPGSSIAVFG-AGAVGLAAVMAAKIAGCTTII 215 (365)
T ss_pred eeeEEEecchhEEECCCCCCHHHhhhhcchhhhhhHHHhhhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEE
Confidence 99999999999999999999999999999999999998877888 8999999997 79999999999999999 577
Q ss_pred EEecC-chHHHHHhcCCCeeeeCCChHHHHHHhc--CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCC
Q psy9949 218 TTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAG--AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNT 294 (383)
Q Consensus 218 ~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~--~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~ 294 (383)
+++++ ++.++++++|++.+++++..++.+.+.+ ..++|+++||+|+......+ +++++ ++|+++.+|.......
T Consensus 216 ~~~~~~~k~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~-~~~l~--~~G~~v~~g~~~~~~~ 292 (365)
T cd08278 216 AVDIVDSRLELAKELGATHVINPKEEDLVAAIREITGGGVDYALDTTGVPAVIEQA-VDALA--PRGTLALVGAPPPGAE 292 (365)
T ss_pred EEeCCHHHHHHHHHcCCcEEecCCCcCHHHHHHHHhCCCCcEEEECCCCcHHHHHH-HHHhc--cCCEEEEeCcCCCCCc
Confidence 77754 4667888999999998887666666543 35799999999976553433 89999 9999999864321100
Q ss_pred CCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEE--cCCHHHHHHHHHHHHcCCccc-ccceeecCCCHHHHHHHHh
Q psy9949 295 DSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFF--MPIPYAVKEINKFIERGQIKP-VIDSKYNFCELPTAFEKVQ 371 (383)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~g~l~~-~~~~~~~l~~~~~a~~~l~ 371 (383)
..+++.. + ..++..+..... ....+.+.+++++++++++.. .+...|+++++++|++.+.
T Consensus 293 -----------~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~ 355 (365)
T cd08278 293 -----------VTLDVND--L----LVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSE 355 (365)
T ss_pred -----------cccCHHH--H----hhcCceEEEeecCCcChHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHH
Confidence 0011111 0 011112211111 112567788999999999854 2445899999999999998
Q ss_pred cCCCCCeEEEe
Q psy9949 372 QGHLRGKIILN 382 (383)
Q Consensus 372 ~~~~~gkvvl~ 382 (383)
+++.. |+|++
T Consensus 356 ~~~~~-k~~~~ 365 (365)
T cd08278 356 SGKVI-KPVLR 365 (365)
T ss_pred CCCce-EEEEC
Confidence 87764 88764
No 51
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=2.8e-36 Score=281.52 Aligned_cols=320 Identities=24% Similarity=0.300 Sum_probs=249.2
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
|||+++.+++.+..+.+. +.+.|.+.+++|+|++.++++|++|+....|..+. .+...+|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-------------~~~~~~p~~~g~e 66 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPE-DVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPG-------------PFPPELPYVPGGE 66 (324)
T ss_pred CeEEEEcCCCCccceEEe-ccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCC-------------CCCCCCCcCCccc
Confidence 689999887877778887 67778889999999999999999999988775110 0123457889999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccC
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVY 186 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~ 186 (383)
++|+|+++|+++.++++||+|+++.. ...|+|++|+.++.++++++|+++++++++.++++++||| ++....++
T Consensus 67 ~~G~v~~~G~~v~~~~~Gd~V~~~~~-~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~-~~~~~~~~---- 140 (324)
T cd08244 67 VAGVVDAVGPGVDPAWLGRRVVAHTG-RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-GLLDLATL---- 140 (324)
T ss_pred eEEEEEEeCCCCCCCCCCCEEEEccC-CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHH-HHHHhcCC----
Confidence 99999999999999999999998852 1249999999999999999999999999999999999995 55557787
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcC---CCccEEEEcCC
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVILDAAG 262 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v~d~~g 262 (383)
+++++|+|+|++|++|++++++|+.+|++|++++++ ++.+.++++|++.++++++.++.+.+.+. .++|+++|++|
T Consensus 141 ~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g 220 (324)
T cd08244 141 TPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVG 220 (324)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHcCCCCceEEEECCC
Confidence 899999999999999999999999999999999855 45677788999888888877777666532 47999999999
Q ss_pred CCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHH
Q psy9949 263 IPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEIN 342 (383)
Q Consensus 263 ~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (383)
+...... +++++ ++|+++.++....... .+. ....... ...+.+............+.+++++
T Consensus 221 ~~~~~~~--~~~l~--~~g~~v~~g~~~~~~~---~~~------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (324)
T cd08244 221 GAIGRAA--LALLA--PGGRFLTYGWASGEWT---ALD------EDDARRR----GVTVVGLLGVQAERGGLRALEARAL 283 (324)
T ss_pred hHhHHHH--HHHhc--cCcEEEEEecCCCCCC---ccC------HHHHhhC----CcEEEEeecccCCHHHHHHHHHHHH
Confidence 8766444 89999 9999999864311100 000 0011111 1111111100000001246788899
Q ss_pred HHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 343 KFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 343 ~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
++++++.+.+.+.+.|+++++++|++.+.+++..||++++.
T Consensus 284 ~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 284 AEAAAGRLVPVVGQTFPLERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred HHHHCCCccCccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence 99999999877888999999999999999999999999863
No 52
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.1e-35 Score=278.58 Aligned_cols=319 Identities=24% Similarity=0.322 Sum_probs=247.8
Q ss_pred ceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949 26 RTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR 105 (383)
Q Consensus 26 ~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~ 105 (383)
+|||+++.+++.+..+.++ +.+.|++.++||+|||.++++|+.|+....|..+ .....|.++||
T Consensus 1 ~m~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~---------------~~~~~~~~~g~ 64 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIG-ESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYP---------------PPPGSSEILGL 64 (334)
T ss_pred CcEEEEEEecCCCcceEEE-eCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCC---------------CCCCCCcccce
Confidence 6999999998887778888 6788889999999999999999999988876411 12334678999
Q ss_pred ceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCcc
Q psy9949 106 DFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLV 185 (383)
Q Consensus 106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~ 185 (383)
|++|+|+++|++++++++||+|+++.. +|+|++|++++.++++++|+++++++++.+++++.|||+++...+++
T Consensus 65 e~~G~v~~vG~~v~~~~~Gd~V~~~~~---~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~--- 138 (334)
T PTZ00354 65 EVAGYVEDVGSDVKRFKEGDRVMALLP---GGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDV--- 138 (334)
T ss_pred eeEEEEEEeCCCCCCCCCCCEEEEecC---CCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCC---
Confidence 999999999999999999999998853 59999999999999999999999999999999999999999877888
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChH-HHHHHhc---CCCccEEEEc
Q psy9949 186 YPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPE-AMHSIAG---AGPYDVILDA 260 (383)
Q Consensus 186 ~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~-~~~~i~~---~~g~d~v~d~ 260 (383)
+++++|+|+|++|++|++++++|+.+|++++.+.++ ++.+++.++|++.++++...+ +.+++.. ..++|++||+
T Consensus 139 -~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~ 217 (334)
T PTZ00354 139 -KKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDC 217 (334)
T ss_pred -CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChhHHHHHHHHHhCCCCceEEEEC
Confidence 899999999999999999999999999987776644 566778889998888877654 6666553 2479999999
Q ss_pred CCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEc----CCHH
Q psy9949 261 AGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFM----PIPY 336 (383)
Q Consensus 261 ~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 336 (383)
+|+...... +++++ ++|+++.++...... . ..+++..... +...+.+......... ...+
T Consensus 218 ~~~~~~~~~--~~~l~--~~g~~i~~~~~~~~~-----~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 281 (334)
T PTZ00354 218 VGGSYLSET--AEVLA--VDGKWIVYGFMGGAK-----V------EKFNLLPLLR-KRASIIFSTLRSRSDEYKADLVAS 281 (334)
T ss_pred CchHHHHHH--HHHhc--cCCeEEEEecCCCCc-----c------cccCHHHHHh-hCCEEEeeeccccchhhhHHHHHH
Confidence 987665555 88999 999999985321000 0 0011110000 0111111111000000 0124
Q ss_pred HHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 337 AVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 337 ~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
.+++++++++++.+.+.+.+.+++++++++++.+.+++..||+|+++
T Consensus 282 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~ 328 (334)
T PTZ00354 282 FEREVLPYMEEGEIKPIVDRTYPLEEVAEAHTFLEQNKNIGKVVLTV 328 (334)
T ss_pred HHHHHHHHHHCCCccCccccEEcHHHHHHHHHHHHhCCCCceEEEec
Confidence 56788899999999877888999999999999999888889999863
No 53
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=1e-35 Score=279.33 Aligned_cols=303 Identities=24% Similarity=0.343 Sum_probs=241.2
Q ss_pred eeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCce
Q psy9949 28 AAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDF 107 (383)
Q Consensus 28 ~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~ 107 (383)
|+|++++.+ .+|+++ +.+.|++.++||+||+.++++|++|+....|. .....+|.++|||+
T Consensus 1 ~~~~~~~~~--~~~~~~-~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~----------------~~~~~~p~~~g~e~ 61 (337)
T cd05283 1 KGYAARDAS--GKLEPF-TFERRPLGPDDVDIKITYCGVCHSDLHTLRNE----------------WGPTKYPLVPGHEI 61 (337)
T ss_pred CceEEecCC--CCceEE-eccCCCCCCCeEEEEEEEecccchHHHHhcCC----------------cCCCCCCcccCcce
Confidence 467788766 458888 89999999999999999999999999988775 12234588999999
Q ss_pred eEEEEecCCCCCCCCCCCEEEEe-e-------------------------------cCCCCCCceEEEeecCcccccCCC
Q psy9949 108 CGKIVAKGPRVTDLNIDDVVYGV-I-------------------------------QPHKQGSFSKLILADSALVHKKPS 155 (383)
Q Consensus 108 ~G~Vv~vG~~v~~~~~Gd~V~~~-~-------------------------------~~~~~g~~a~~~~v~~~~~~~ip~ 155 (383)
+|+|+++|+++++|++||+|+.. . .....|+|++|+.++.+.++++|+
T Consensus 62 ~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~ 141 (337)
T cd05283 62 VGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPE 141 (337)
T ss_pred eeEEEEECCCCcccCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCC
Confidence 99999999999999999999731 0 012358999999999999999999
Q ss_pred CCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCC
Q psy9949 156 NISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPN 234 (383)
Q Consensus 156 ~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~ 234 (383)
++++++++.+.+.+.|||+++.. ..+ +++++++|.| +|++|++++++|+.+|++|++++++ ++.++++++|++
T Consensus 142 ~~~~~~aa~l~~~~~ta~~~~~~-~~~----~~g~~vlV~g-~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~ 215 (337)
T cd05283 142 GLDSAAAAPLLCAGITVYSPLKR-NGV----GPGKRVGVVG-IGGLGHLAVKFAKALGAEVTAFSRSPSKKEDALKLGAD 215 (337)
T ss_pred CCCHHHhhhhhhHHHHHHHHHHh-cCC----CCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCc
Confidence 99999999999999999999874 457 8999999977 8999999999999999999999865 566788889999
Q ss_pred eeeeCCChHHHHHHhcCCCccEEEEcCCCCc-ccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhh
Q psy9949 235 LVIDYNEPEAMHSIAGAGPYDVILDAAGIPL-DQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKS 313 (383)
Q Consensus 235 ~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~-~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (383)
.+++....++.... ..++|++|||+|+.. .... +++++ ++|+++.+|.+.... .++..
T Consensus 216 ~vi~~~~~~~~~~~--~~~~d~v~~~~g~~~~~~~~--~~~l~--~~G~~v~~g~~~~~~-------------~~~~~-- 274 (337)
T cd05283 216 EFIATKDPEAMKKA--AGSLDLIIDTVSASHDLDPY--LSLLK--PGGTLVLVGAPEEPL-------------PVPPF-- 274 (337)
T ss_pred EEecCcchhhhhhc--cCCceEEEECCCCcchHHHH--HHHhc--CCCEEEEEeccCCCC-------------ccCHH--
Confidence 88887765543322 357999999999875 3444 88999 999999986431110 01111
Q ss_pred hhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949 314 NFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382 (383)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~ 382 (383)
. +..++..+. +......+.++.++++++++++++.+ +.|+++++++||+.+.+++..||+|++
T Consensus 275 ~----~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 275 P----LIFGRKSVA-GSLIGGRKETQEMLDFAAEHGIKPWV-EVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred H----HhcCceEEE-EecccCHHHHHHHHHHHHhCCCccce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 0 011222222 22233578899999999999998765 689999999999999999999999985
No 54
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.9e-36 Score=282.75 Aligned_cols=307 Identities=23% Similarity=0.351 Sum_probs=244.2
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
|+++++.+++++ +.++ +.+.|+++++|++||+.++++|++|+....|. .+...+|.++|||
T Consensus 1 m~a~~~~~~~~~--~~~~-~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~----------------~~~~~~~~~~g~e 61 (334)
T PRK13771 1 MKAVILPGFKQG--YRIE-EVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGF----------------YPRMKYPVILGHE 61 (334)
T ss_pred CeeEEEcCCCCC--cEEE-eCCCCCCCCCeEEEEEEEEeechhhHHHhcCC----------------CCCCCCCeecccc
Confidence 789999888763 7788 78999999999999999999999999888775 1223557889999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeecC------------------------CCCCCceEEEeecCcccccCCCCCCHHHH
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQP------------------------HKQGSFSKLILADSALVHKKPSNISDEEA 162 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~------------------------~~~g~~a~~~~v~~~~~~~ip~~~~~~~a 162 (383)
++|+|+++|++++.+++||+|+++... ..+|+|++|+.++.+.++++|+++++.++
T Consensus 62 ~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~ 141 (334)
T PRK13771 62 VVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGA 141 (334)
T ss_pred ceEEEEEeCCCCccCCCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHh
Confidence 999999999999889999999986310 11589999999999999999999999999
Q ss_pred HhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCC
Q psy9949 163 AGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNE 241 (383)
Q Consensus 163 a~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~ 241 (383)
+.+++.+.+||+++... ++ +++++|+|+|++|++|++++++|+..|++|++++++ ++.+.++++ ++.+++++
T Consensus 142 a~l~~~~~~a~~~~~~~-~~----~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~~~~~- 214 (334)
T PRK13771 142 VIVPCVTGMVYRGLRRA-GV----KKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSKY-ADYVIVGS- 214 (334)
T ss_pred hcccchHHHHHHHHHhc-CC----CCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-HHHhcCch-
Confidence 99999999999999755 77 899999999988999999999999999999988854 456777777 76666655
Q ss_pred hHHHHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhcccccc
Q psy9949 242 PEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELC 321 (383)
Q Consensus 242 ~~~~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (383)
++.+.+.+.+++|+++||+|+...... +++++ ++|+++.+|...... .+ . ..+... + .
T Consensus 215 -~~~~~v~~~~~~d~~ld~~g~~~~~~~--~~~l~--~~G~~v~~g~~~~~~----~~--~-----~~~~~~-~-----~ 272 (334)
T PRK13771 215 -KFSEEVKKIGGADIVIETVGTPTLEES--LRSLN--MGGKIIQIGNVDPSP----TY--S-----LRLGYI-I-----L 272 (334)
T ss_pred -hHHHHHHhcCCCcEEEEcCChHHHHHH--HHHHh--cCCEEEEEeccCCCC----Cc--c-----cCHHHH-H-----h
Confidence 455556555579999999998765444 88999 999999986421100 00 0 000000 0 1
Q ss_pred CCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949 322 KTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382 (383)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~ 382 (383)
++..+. +......+++++++++++++.++..+.+.|+++++++|++.+.++...||++++
T Consensus 273 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (334)
T PRK13771 273 KDIEII-GHISATKRDVEEALKLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVK 332 (334)
T ss_pred cccEEE-EecCCCHHHHHHHHHHHHcCCCcceEeeeEcHHHHHHHHHHHHcCCCcceEEEe
Confidence 111211 112345788999999999999987788899999999999999988888999986
No 55
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=7.4e-36 Score=280.58 Aligned_cols=306 Identities=20% Similarity=0.268 Sum_probs=234.7
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
|||+++.+++ .+.++ +.+.|+|+++||+||+.+++||++|++...|.. ....+|.++|||
T Consensus 1 m~a~~~~~~~---~~~~~-~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~----------------~~~~~p~i~G~e 60 (339)
T PRK10083 1 MKSIVIEKPN---SLAIE-ERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHN----------------PFAKYPRVIGHE 60 (339)
T ss_pred CeEEEEecCC---eeEEE-eccCCCCCCCeEEEEEEEEEEcccchHHHcCCC----------------CcCCCCcccccc
Confidence 6888888755 47888 899999999999999999999999999887751 123468899999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEee------------------------cCCCCCCceEEEeecCcccccCCCCCCHHHH
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVI------------------------QPHKQGSFSKLILADSALVHKKPSNISDEEA 162 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~------------------------~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~a 162 (383)
++|+|+++|++++.+++||+|+... ....+|+|++|+.++.+.++++|++++++++
T Consensus 61 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a 140 (339)
T PRK10083 61 FFGVIDAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYA 140 (339)
T ss_pred eEEEEEEECCCCccCCCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHH
Confidence 9999999999999999999998421 0112589999999999999999999999887
Q ss_pred HhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHH-CCCE-EEEEecC-chHHHHHhcCCCeeeeC
Q psy9949 163 AGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKA-WDIE-VVTTCSG-DAKDLVTSLNPNLVIDY 239 (383)
Q Consensus 163 a~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~-~G~~-Vi~~~~~-~~~~~~~~lg~~~v~~~ 239 (383)
+ +...+.++|+++ ...++ +++++|+|+| +|++|++++|+|+. +|++ ++++.++ ++.++++++|++.++++
T Consensus 141 ~-~~~~~~~a~~~~-~~~~~----~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~ 213 (339)
T PRK10083 141 V-MVEPFTIAANVT-GRTGP----TEQDVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINN 213 (339)
T ss_pred h-hhchHHHHHHHH-HhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecC
Confidence 6 445677788654 46777 8999999999 89999999999996 6995 6666644 46678899999999988
Q ss_pred CChHHHHHHhcCC-CccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccc
Q psy9949 240 NEPEAMHSIAGAG-PYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESG 318 (383)
Q Consensus 240 ~~~~~~~~i~~~~-g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (383)
++.++.+.+...+ ++|++||++|+....... +++++ ++|+++.+|.... .. ..... .+.
T Consensus 214 ~~~~~~~~~~~~g~~~d~vid~~g~~~~~~~~-~~~l~--~~G~~v~~g~~~~----~~----~~~~~--~~~------- 273 (339)
T PRK10083 214 AQEPLGEALEEKGIKPTLIIDAACHPSILEEA-VTLAS--PAARIVLMGFSSE----PS----EIVQQ--GIT------- 273 (339)
T ss_pred ccccHHHHHhcCCCCCCEEEECCCCHHHHHHH-HHHhh--cCCEEEEEccCCC----Cc----eecHH--HHh-------
Confidence 8777777765432 467999999976543333 88999 9999999864310 00 00000 111
Q ss_pred cccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcC-CCCCeEEEeC
Q psy9949 319 ELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQG-HLRGKIILNA 383 (383)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~-~~~gkvvl~~ 383 (383)
.++..+. +. ....+.+.+++++++++++.+ ++.++|+++++++|++.+.++ ...+|+++++
T Consensus 274 --~~~~~~~-~~-~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~ 337 (339)
T PRK10083 274 --GKELSIF-SS-RLNANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTF 337 (339)
T ss_pred --hcceEEE-EE-ecChhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEec
Confidence 1111221 11 124678999999999999987 478899999999999999855 3558999864
No 56
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=8.7e-36 Score=280.20 Aligned_cols=309 Identities=23% Similarity=0.325 Sum_probs=243.0
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
||++++.+++++ +.+. +.+.|++++++|+||+.++++|++|+....|..+. .....+|.++|+|
T Consensus 1 ~ka~~~~~~~~~--~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-------------~~~~~~~~~~G~e 64 (340)
T cd05284 1 MKAARLYEYGKP--LRLE-DVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGG-------------ILPYKLPFTLGHE 64 (340)
T ss_pred CeeeEeccCCCC--ceEE-eCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcc-------------cccCCCCeecccc
Confidence 689999987654 6777 78889999999999999999999999988775110 0234567899999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeec------------------------CCCCCCceEEEeecCcccccCCCCCCHHHH
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQ------------------------PHKQGSFSKLILADSALVHKKPSNISDEEA 162 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~a 162 (383)
++|+|+++|+++..|++||+|+++.. ...+|+|++|+.++.++++++|++++++++
T Consensus 65 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~a 144 (340)
T cd05284 65 NAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEA 144 (340)
T ss_pred eeEEEEEeCCCCCcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHh
Confidence 99999999999999999999987641 112589999999999999999999999999
Q ss_pred HhhhHHHHHHHHHHHHh-hhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecC-chHHHHHhcCCCeeeeC
Q psy9949 163 AGVLYTGLTAWSALQIT-AALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWD-IEVVTTCSG-DAKDLVTSLNPNLVIDY 239 (383)
Q Consensus 163 a~l~~~~~tA~~~l~~~-~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G-~~Vi~~~~~-~~~~~~~~lg~~~v~~~ 239 (383)
+.+++.++|||+++... ..+ .++++|+|+| +|++|++++++|+.+| ++|++++++ ++.+.++++|+++++++
T Consensus 145 a~l~~~~~ta~~~l~~~~~~~----~~~~~vlI~g-~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~ 219 (340)
T cd05284 145 APLADAGLTAYHAVKKALPYL----DPGSTVVVIG-VGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNA 219 (340)
T ss_pred hhhcchHHHHHHHHHHhcccC----CCCCEEEEEc-CcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEcC
Confidence 99999999999999765 456 7899999999 6779999999999999 799988854 56677889999999988
Q ss_pred CChHHHHHHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhc
Q psy9949 240 NEPEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFE 316 (383)
Q Consensus 240 ~~~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (383)
+.. +.+++.+. .++|+++|++|+....... +++++ ++|+++.++.... . .. . .....
T Consensus 220 ~~~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~-~~~l~--~~g~~i~~g~~~~---~--~~--~----~~~~~----- 279 (340)
T cd05284 220 SDD-VVEEVRELTGGRGADAVIDFVGSDETLALA-AKLLA--KGGRYVIVGYGGH---G--RL--P----TSDLV----- 279 (340)
T ss_pred Ccc-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHH-HHHhh--cCCEEEEEcCCCC---C--cc--C----HHHhh-----
Confidence 776 66666542 4799999999974433332 88999 9999999864211 0 00 0 00001
Q ss_pred cccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949 317 SGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382 (383)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~ 382 (383)
.++..+. +......+.+.+++++++++.+++ ..+.|+++++++|++.+.+++..||+++.
T Consensus 280 ----~~~~~~~-~~~~~~~~~~~~~~~~l~~g~l~~-~~~~~~~~~~~~a~~~~~~~~~~gkvv~~ 339 (340)
T cd05284 280 ----PTEISVI-GSLWGTRAELVEVVALAESGKVKV-EITKFPLEDANEALDRLREGRVTGRAVLV 339 (340)
T ss_pred ----hcceEEE-EEecccHHHHHHHHHHHHhCCCCc-ceEEEeHHHHHHHHHHHHcCCccceEEec
Confidence 1111221 111224678899999999999876 44579999999999999999999999986
No 57
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=1.3e-35 Score=277.79 Aligned_cols=307 Identities=27% Similarity=0.370 Sum_probs=245.9
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
|+++++..++ +.+.++ +.|.|++.+++|+|+++++++|++|++...|. .+....|.++|||
T Consensus 1 m~a~~~~~~~--~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~----------------~~~~~~~~~~g~e 61 (332)
T cd08259 1 MKAAILHKPN--KPLQIE-EVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGF----------------FPRGKYPLILGHE 61 (332)
T ss_pred CeEEEEecCC--CceEEE-EccCCCCCCCeEEEEEEEEecchhhhHHhcCC----------------CCCCCCCeecccc
Confidence 6889988643 347888 78999999999999999999999999988775 1223457899999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeecC------------------------CCCCCceEEEeecCcccccCCCCCCHHHH
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQP------------------------HKQGSFSKLILADSALVHKKPSNISDEEA 162 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~------------------------~~~g~~a~~~~v~~~~~~~ip~~~~~~~a 162 (383)
++|+|+++|++++++++||+|+++... ...|+|++|++++.+.++++|++++++++
T Consensus 62 ~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~ 141 (332)
T cd08259 62 IVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESA 141 (332)
T ss_pred ceEEEEEECCCCccCCCCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHH
Confidence 999999999999999999999987410 12589999999999999999999999999
Q ss_pred HhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCC
Q psy9949 163 AGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNE 241 (383)
Q Consensus 163 a~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~ 241 (383)
+.+++++.|||+++.. .++ +++++++|+|++|++|++++++++..|++|++++++ ++.+.+.+++.+.+++..+
T Consensus 142 ~~~~~~~~ta~~~l~~-~~~----~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (332)
T cd08259 142 ALAACVVGTAVHALKR-AGV----KKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVIDGSK 216 (332)
T ss_pred hhhccHHHHHHHHHHH-hCC----CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEEEecHH
Confidence 9999999999999986 777 899999999999999999999999999999998855 4566778888887776554
Q ss_pred hHHHHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhcccccc
Q psy9949 242 PEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELC 321 (383)
Q Consensus 242 ~~~~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (383)
+.+.+....++|++++++|....... +++++ ++|+++.++...... .. ....... .
T Consensus 217 --~~~~~~~~~~~d~v~~~~g~~~~~~~--~~~~~--~~g~~v~~g~~~~~~-------~~-~~~~~~~----------~ 272 (332)
T cd08259 217 --FSEDVKKLGGADVVIELVGSPTIEES--LRSLN--KGGRLVLIGNVTPDP-------AP-LRPGLLI----------L 272 (332)
T ss_pred --HHHHHHhccCCCEEEECCChHHHHHH--HHHhh--cCCEEEEEcCCCCCC-------cC-CCHHHHH----------h
Confidence 66666655689999999998775444 88999 999999886421110 00 0000000 0
Q ss_pred CCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949 322 KTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382 (383)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~ 382 (383)
++..+ .+......+++++++++++++.+++.+.++|+++++++||+.+.+++..||++++
T Consensus 273 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 273 KEIRI-IGSISATKADVEEALKLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred CCcEE-EEecCCCHHHHHHHHHHHHcCCCccceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 11111 1222345788999999999999988888899999999999999999888999875
No 58
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=3.8e-36 Score=285.46 Aligned_cols=309 Identities=22% Similarity=0.361 Sum_probs=245.2
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
||||++.+++.+ +.++ +.|.|.++++||+||+.++++|++|+....|. ....+|.++|||
T Consensus 1 ~~a~~~~~~~~~--~~~~-~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~-----------------~~~~~p~~~g~e 60 (367)
T cd08263 1 MKAAVLKGPNPP--LTIE-EIPVPRPKEGEILIRVAACGVCHSDLHVLKGE-----------------LPFPPPFVLGHE 60 (367)
T ss_pred CeeEEEecCCCC--cEEE-EeeCCCCCCCeEEEEEEEeeeCcchHHHhcCC-----------------CCCCCCcccccc
Confidence 789999987643 6777 78999999999999999999999999988775 113567899999
Q ss_pred eeEEEEecCCCCCC---CCCCCEEEEeec----------------------------------------------CCCCC
Q psy9949 107 FCGKIVAKGPRVTD---LNIDDVVYGVIQ----------------------------------------------PHKQG 137 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~---~~~Gd~V~~~~~----------------------------------------------~~~~g 137 (383)
++|+|+++|+++++ |++||+|++... ....|
T Consensus 61 ~~G~v~~vG~~~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 140 (367)
T cd08263 61 ISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMG 140 (367)
T ss_pred cceEEEEeCCCCCCCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCC
Confidence 99999999999988 999999988310 01258
Q ss_pred CceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-E
Q psy9949 138 SFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE-V 216 (383)
Q Consensus 138 ~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-V 216 (383)
+|++|+.++.+.++++|+++++.+++.++.+++|||+++.+.+.+ +++++|+|+| +|++|++++++|+.+|++ +
T Consensus 141 ~~~~~~~~~~~~~~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~----~~g~~VlI~g-~g~vG~~~~~lak~~G~~~v 215 (367)
T cd08263 141 GLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADV----RPGETVAVIG-VGGVGSSAIQLAKAFGASPI 215 (367)
T ss_pred cceeEEEechhhEEECCCCCCHHHHhHhcchHHHHHHHHHhcccC----CCCCEEEEEC-CcHHHHHHHHHHHHcCCCeE
Confidence 999999999999999999999999999999999999999877877 8999999996 899999999999999996 8
Q ss_pred EEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhc---CCCccEEEEcCCCC-cccccccccccccCCCceEEEecCCCc
Q psy9949 217 VTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAG---AGPYDVILDAAGIP-LDQINSYLPFLKTGKFSKFVTLRSPFL 291 (383)
Q Consensus 217 i~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~---~~g~d~v~d~~g~~-~~~~~~~~~~l~~~~~G~~v~~~~~~~ 291 (383)
++++++ ++.++++++|++.+++++..++.+++.. ..++|++||++++. ..... +++++ ++|+++.++....
T Consensus 216 i~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~--~~~l~--~~G~~v~~g~~~~ 291 (367)
T cd08263 216 IAVDVRDEKLAKAKELGATHTVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLA--LDVVR--DGGRAVVVGLAPG 291 (367)
T ss_pred EEEeCCHHHHHHHHHhCCceEecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHH--HHHHh--cCCEEEEEccCCC
Confidence 888754 4667888899999999887777766654 24699999999987 44444 89999 9999999864211
Q ss_pred cCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEc-CCHHHHHHHHHHHHcCCcccc--cceeecCCCHHHHHH
Q psy9949 292 KNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFM-PIPYAVKEINKFIERGQIKPV--IDSKYNFCELPTAFE 368 (383)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~a~~ 368 (383)
.. .. .+++.. + ..++..+. +... ...+.+++++++++++.+++. +++.++++++.++++
T Consensus 292 ~~--~~---------~~~~~~--~----~~~~~~~~-~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~ 353 (367)
T cd08263 292 GA--TA---------EIPITR--L----VRRGIKII-GSYGARPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYE 353 (367)
T ss_pred CC--cc---------ccCHHH--H----hhCCeEEE-ecCCCCcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHH
Confidence 10 00 011110 0 01111111 1111 125789999999999998763 578899999999999
Q ss_pred HHhcCCCCCeEEEe
Q psy9949 369 KVQQGHLRGKIILN 382 (383)
Q Consensus 369 ~l~~~~~~gkvvl~ 382 (383)
.+.+++..||+|++
T Consensus 354 ~~~~~~~~g~~~~~ 367 (367)
T cd08263 354 NLRKGLIHGRAIVE 367 (367)
T ss_pred HHhcCCccceeeeC
Confidence 99999988999974
No 59
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=2.2e-36 Score=262.07 Aligned_cols=304 Identities=22% Similarity=0.307 Sum_probs=233.1
Q ss_pred CceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCce----eEEEEe
Q psy9949 38 ADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDF----CGKIVA 113 (383)
Q Consensus 38 ~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~----~G~Vv~ 113 (383)
+++|+++ +.++|+|++||||+|+.|.+++|. ++|. |.+ .+..-.|+-+|-.. +|+|++
T Consensus 24 ~d~F~le-e~~vp~p~~GqvLl~~~ylS~DPy----mRgr-------m~d------~~SY~~P~~lG~~~~gg~V~~Vv~ 85 (340)
T COG2130 24 PDDFRLE-EVDVPEPGEGQVLLRTLYLSLDPY----MRGR-------MSD------APSYAPPVELGEVMVGGTVAKVVA 85 (340)
T ss_pred CCCceeE-eccCCCCCcCceEEEEEEeccCHH----Heec-------ccC------CcccCCCcCCCceeECCeeEEEEe
Confidence 3568999 899999999999999999999983 3333 222 11223355555544 556665
Q ss_pred cCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCH--HHHHhhhHHHHHHHHHHHHhhhcCccCCCCCE
Q psy9949 114 KGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISD--EEAAGVLYTGLTAWSALQITAALGLVYPRDKR 191 (383)
Q Consensus 114 vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~--~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~ 191 (383)
++..+|++||.|.+. .+|++|.+++.+.+.|++++.-+ .....+..++.|||.+|.+.++. ++|++
T Consensus 86 --S~~~~f~~GD~V~~~------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqp----k~Get 153 (340)
T COG2130 86 --SNHPGFQPGDIVVGV------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQP----KAGET 153 (340)
T ss_pred --cCCCCCCCCCEEEec------ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCC----CCCCE
Confidence 677889999999988 47999999999999999866422 22334567889999999999999 99999
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHh-cCCCeeeeCCChHHHHHHhcC--CCccEEEEcCCCCccc
Q psy9949 192 VLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTS-LNPNLVIDYNEPEAMHSIAGA--GPYDVILDAAGIPLDQ 267 (383)
Q Consensus 192 VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~-lg~~~v~~~~~~~~~~~i~~~--~g~d~v~d~~g~~~~~ 267 (383)
|+|.+|+|++|..+.|+||..|++|++++.+ ++.+++.+ +|.|.++||+..++.+.+++. .|+|++||++|++...
T Consensus 154 vvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvyfeNVGg~v~D 233 (340)
T COG2130 154 VVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVYFENVGGEVLD 233 (340)
T ss_pred EEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeEEEEEcCCchHHH
Confidence 9999999999999999999999999999955 56678766 999999999999999999876 5899999999999987
Q ss_pred ccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEc-CCHHHHHHHHHHHH
Q psy9949 268 INSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFM-PIPYAVKEINKFIE 346 (383)
Q Consensus 268 ~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~ 346 (383)
.. +..|+ ..+|++.||.-...+.... +.++ ......+.+.+.++|.-.. ..+. ...+.++++.++++
T Consensus 234 Av--~~~ln--~~aRi~~CG~IS~YN~~~~--~~gp-----~~l~~l~~kr~~v~Gfiv~-~~~~~~~~e~~~~l~~wv~ 301 (340)
T COG2130 234 AV--LPLLN--LFARIPVCGAISQYNAPEL--PPGP-----RRLPLLMAKRLRVQGFIVA-SDYDQRFPEALRELGGWVK 301 (340)
T ss_pred HH--HHhhc--cccceeeeeehhhcCCCCC--CCCc-----chhhHHHhhhheeEEEEec-hhhhhhhHHHHHHHHHHHH
Confidence 77 88999 9999999974222221110 0111 1111111123344443221 1112 23588899999999
Q ss_pred cCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 347 RGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 347 ~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
+|+|+...+-+-.|+++++||.-|.++++.||.|+++
T Consensus 302 ~GKi~~~eti~dGlEnaP~Af~gLl~G~N~GK~vvKv 338 (340)
T COG2130 302 EGKIQYRETIVDGLENAPEAFIGLLSGKNFGKLVVKV 338 (340)
T ss_pred cCceeeEeeehhhhhccHHHHHHHhcCCccceEEEEe
Confidence 9999887776678999999999999999999999985
No 60
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=7.6e-36 Score=280.38 Aligned_cols=306 Identities=18% Similarity=0.273 Sum_probs=238.6
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
||++++++++++.. ++ +.|.|+++++||+|||.++++|++|+....|.. . ...|.++|||
T Consensus 1 mka~~~~~~~~~~~--~~-~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~----------------~-~~~~~~~g~e 60 (338)
T PRK09422 1 MKAAVVNKDHTGDV--VV-EKTLRPLKHGEALVKMEYCGVCHTDLHVANGDF----------------G-DKTGRILGHE 60 (338)
T ss_pred CeEEEecCCCCCce--EE-EecCCCCCCCeEEEEEEEEeechhHHHHHcCCC----------------C-CCCCccCCcc
Confidence 78999998776522 67 789999999999999999999999999887751 1 1236789999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEE-----------eec--------------CCCCCCceEEEeecCcccccCCCCCCHHH
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYG-----------VIQ--------------PHKQGSFSKLILADSALVHKKPSNISDEE 161 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~-----------~~~--------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~ 161 (383)
++|+|+++|++++.|++||+|++ ++. ...+|+|++|+.++.+.++++|+++++++
T Consensus 61 ~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~ 140 (338)
T PRK09422 61 GIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQ 140 (338)
T ss_pred cceEEEEECCCCccCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHH
Confidence 99999999999999999999986 220 11259999999999999999999999999
Q ss_pred HHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHH-CCCEEEEEecC-chHHHHHhcCCCeeeeC
Q psy9949 162 AAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKA-WDIEVVTTCSG-DAKDLVTSLNPNLVIDY 239 (383)
Q Consensus 162 aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~-~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~ 239 (383)
++.++.+++|||+++ ..+++ +++++|+|+| +|++|++++++|+. .|++|++++++ ++.++++++|++.++++
T Consensus 141 aa~l~~~~~ta~~~~-~~~~~----~~g~~vlV~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~ 214 (338)
T PRK09422 141 ASSITCAGVTTYKAI-KVSGI----KPGQWIAIYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINS 214 (338)
T ss_pred eehhhcchhHHHHHH-HhcCC----CCCCEEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHHcCCcEEecc
Confidence 999999999999998 57788 9999999999 79999999999998 59999999855 57788899999988887
Q ss_pred CC-hHHHHHHhcC-CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhcc
Q psy9949 240 NE-PEAMHSIAGA-GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFES 317 (383)
Q Consensus 240 ~~-~~~~~~i~~~-~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (383)
+. .++.+.+.+. +++|.++++.++......+ +++++ ++|+++.+|.... ... ++....
T Consensus 215 ~~~~~~~~~v~~~~~~~d~vi~~~~~~~~~~~~-~~~l~--~~G~~v~~g~~~~----~~~---------~~~~~~---- 274 (338)
T PRK09422 215 KRVEDVAKIIQEKTGGAHAAVVTAVAKAAFNQA-VDAVR--AGGRVVAVGLPPE----SMD---------LSIPRL---- 274 (338)
T ss_pred cccccHHHHHHHhcCCCcEEEEeCCCHHHHHHH-HHhcc--CCCEEEEEeeCCC----Cce---------ecHHHH----
Confidence 54 5555666543 4788555555544443433 88999 9999999864210 000 011110
Q ss_pred ccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949 318 GELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382 (383)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~ 382 (383)
..++..+ .+......++++.+++++++|++.+.+. .++++++++|++.+.+++..||++++
T Consensus 275 --~~~~~~~-~~~~~~~~~~~~~~~~l~~~g~l~~~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~ 335 (338)
T PRK09422 275 --VLDGIEV-VGSLVGTRQDLEEAFQFGAEGKVVPKVQ-LRPLEDINDIFDEMEQGKIQGRMVID 335 (338)
T ss_pred --hhcCcEE-EEecCCCHHHHHHHHHHHHhCCCCccEE-EEcHHHHHHHHHHHHcCCccceEEEe
Confidence 1111122 1222234678999999999999876655 58999999999999999999999986
No 61
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=9.2e-36 Score=282.89 Aligned_cols=312 Identities=17% Similarity=0.184 Sum_probs=236.9
Q ss_pred ceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949 26 RTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR 105 (383)
Q Consensus 26 ~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~ 105 (383)
+||++++...+++ ++++ +.|.|++.++||+|||.++|||++|++...|.. ...+|.++||
T Consensus 7 ~~~a~~~~~~~~~--~~l~-~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~-----------------~~~~p~v~G~ 66 (373)
T cd08299 7 KCKAAVLWEPKKP--FSIE-EIEVAPPKAHEVRIKIVATGICRSDDHVVSGKL-----------------VTPFPVILGH 66 (373)
T ss_pred eeEEEEEecCCCC--cEEE-EeecCCCCCCEEEEEEEEEEcCcccHHHhcCCC-----------------CCCCCccccc
Confidence 4889988876654 6788 899999999999999999999999999988751 1346789999
Q ss_pred ceeEEEEecCCCCCCCCCCCEEEEeecC---------------------------------------------CCCCCce
Q psy9949 106 DFCGKIVAKGPRVTDLNIDDVVYGVIQP---------------------------------------------HKQGSFS 140 (383)
Q Consensus 106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~---------------------------------------------~~~g~~a 140 (383)
|++|+|+++|++++.+++||+|+++... ...|+|+
T Consensus 67 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 146 (373)
T cd08299 67 EAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFS 146 (373)
T ss_pred cceEEEEEeCCCCccCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCccc
Confidence 9999999999999999999999875100 0248999
Q ss_pred EEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEE
Q psy9949 141 KLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTT 219 (383)
Q Consensus 141 ~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~ 219 (383)
||++++.+.++++|+++++++++.++++++|||+++...+++ +++++|+|+| +|++|++++++|+.+|+ +|+++
T Consensus 147 e~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~~----~~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~ 221 (373)
T cd08299 147 EYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKV----TPGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAV 221 (373)
T ss_pred ceEEecccceeeCCCCCChHHhheeccchHHHHHHHHhccCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEE
Confidence 999999999999999999999999999999999998777888 9999999997 79999999999999999 89999
Q ss_pred ecC-chHHHHHhcCCCeeeeCCChH--HHHHHhc--CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCC
Q psy9949 220 CSG-DAKDLVTSLNPNLVIDYNEPE--AMHSIAG--AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNT 294 (383)
Q Consensus 220 ~~~-~~~~~~~~lg~~~v~~~~~~~--~~~~i~~--~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~ 294 (383)
+++ ++++.++++|+++++++.+.+ +.+.+.+ .+++|+++||+|++.....++..++. ++|+++.+|.....
T Consensus 222 ~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~--~~G~~v~~g~~~~~-- 297 (373)
T cd08299 222 DINKDKFAKAKELGATECINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHE--GYGVSVIVGVPPSS-- 297 (373)
T ss_pred cCCHHHHHHHHHcCCceEecccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhcc--CCCEEEEEccCCCC--
Confidence 854 567888999999988876432 4444432 24799999999976543333133456 78999998642100
Q ss_pred CCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEc--CCHHHHHHHHHHHHcCCc--ccccceeecCCCHHHHHHHH
Q psy9949 295 DSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFM--PIPYAVKEINKFIERGQI--KPVIDSKYNFCELPTAFEKV 370 (383)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~g~l--~~~~~~~~~l~~~~~a~~~l 370 (383)
..+++....+ .++..+...... ...+.+.++++.+.++.+ ++++.++|+++++++|++.+
T Consensus 298 -----------~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~ 361 (373)
T cd08299 298 -----------QNLSINPMLL-----LTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLL 361 (373)
T ss_pred -----------ceeecCHHHH-----hcCCeEEEEEecCCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHH
Confidence 0011111111 111111111111 124567777777777754 44678899999999999999
Q ss_pred hcCCCCCeEEEeC
Q psy9949 371 QQGHLRGKIILNA 383 (383)
Q Consensus 371 ~~~~~~gkvvl~~ 383 (383)
.+++. .|+++.+
T Consensus 362 ~~~~~-~k~~~~~ 373 (373)
T cd08299 362 RSGKS-IRTVLTF 373 (373)
T ss_pred hCCCc-ceEEEeC
Confidence 87765 5888865
No 62
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=1.3e-35 Score=277.17 Aligned_cols=317 Identities=20% Similarity=0.190 Sum_probs=236.4
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
|||+++..+++++.++++ +.|.|.+++++|+||+.++++|++|+....|..+ ....+|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~---------------~~~~~~~~~g~e 64 (325)
T cd05280 1 FKALVVEEQDGGVSLFLR-TLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGG---------------VTRNYPHTPGID 64 (325)
T ss_pred CceEEEcccCCCCcceEE-eCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCC---------------CCCCCCCccCcc
Confidence 789999998876678898 8999999999999999999999999998877521 113457789999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEee---cCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcC
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVI---QPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALG 183 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~---~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~ 183 (383)
++|+|+++ +++.+++||+|++.. +...+|+|++|++++.+.++++|+++++++++.+++.+.|||+++....+..
T Consensus 65 ~~G~v~~~--~~~~~~~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~ 142 (325)
T cd05280 65 AAGTVVSS--DDPRFREGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNG 142 (325)
T ss_pred cEEEEEEe--CCCCCCCCCEEEEcccccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhcc
Confidence 99999998 456799999999863 1122599999999999999999999999999999999999999987543221
Q ss_pred ccCC-CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHH-HHHhcCCCccEEEEc
Q psy9949 184 LVYP-RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAM-HSIAGAGPYDVILDA 260 (383)
Q Consensus 184 ~~~~-~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~-~~i~~~~g~d~v~d~ 260 (383)
. + .+++|+|+|++|++|++++++|+.+|++|++++++ ++.+.++++|+++++++++.... .......++|+++|+
T Consensus 143 ~--~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 220 (325)
T cd05280 143 Q--TPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKSLGASEVLDREDLLDESKKPLLKARWAGAIDT 220 (325)
T ss_pred C--CCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEcchhHHHHHHHHhcCCCccEEEEC
Confidence 0 3 35799999988999999999999999999988855 46678889999988876653211 111123479999999
Q ss_pred CCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEc--CCHHHH
Q psy9949 261 AGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFM--PIPYAV 338 (383)
Q Consensus 261 ~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 338 (383)
+|+...... +++++ ++|+++.+|....... .++... .+.++..+.+... .... ...+.+
T Consensus 221 ~~~~~~~~~--~~~l~--~~g~~v~~g~~~~~~~------------~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~ 281 (325)
T cd05280 221 VGGDVLANL--LKQTK--YGGVVASCGNAAGPEL------------TTTVLP-FILRGVSLLGIDS--VNCPMELRKQVW 281 (325)
T ss_pred CchHHHHHH--HHhhc--CCCEEEEEecCCCCcc------------ccccch-heeeeeEEEEEEe--ecCchhHHHHHH
Confidence 998665555 89999 9999999865321110 000000 0011222222111 0000 112445
Q ss_pred HHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 339 KEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 339 ~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
+.+.+++..+ +...+.++|++++++++++.+.+++..||+|++|
T Consensus 282 ~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 282 QKLATEWKPD-LLEIVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred HHHHHHHhcC-CccceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 6666666666 3345778999999999999999999999999986
No 63
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=3.7e-36 Score=282.47 Aligned_cols=320 Identities=28% Similarity=0.316 Sum_probs=247.7
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
|+|+++..+| +..++++ +++.|+++++||+||+.++++|++|+....+. . ....|.++|||
T Consensus 1 m~a~~~~~~~-~~~~~~~-~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~----------------~-~~~~~~~~g~e 61 (339)
T cd08249 1 QKAAVLTGPG-GGLLVVV-DVPVPKPGPDEVLVKVKAVALNPVDWKHQDYG----------------F-IPSYPAILGCD 61 (339)
T ss_pred CceEEeccCC-CCccccc-CCCCCCCCCCEEEEEEEEEEcCchheeeeecc----------------c-ccCCCceeeee
Confidence 7899999887 6778888 89999999999999999999999999876553 1 12246789999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeecC-----CCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhh
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQP-----HKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAA 181 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~-----~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~ 181 (383)
++|+|+.+|++++.+++||+|+++... ..+|+|++|++++.+.++++|+++++++++.+++.+.|||+++....+
T Consensus 62 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~ 141 (339)
T cd08249 62 FAGTVVEVGSGVTRFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLG 141 (339)
T ss_pred eeEEEEEeCCCcCcCCCCCEEEEEeccccCCCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhcccc
Confidence 999999999999999999999998631 225899999999999999999999999999999999999999875543
Q ss_pred cC------ccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcC--CC
Q psy9949 182 LG------LVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGA--GP 253 (383)
Q Consensus 182 ~~------~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~--~g 253 (383)
+. ...+++++|+|+|++|++|++++++|+.+|++|++++++++.+.++++|++.++++.+.++.+.+.+. ++
T Consensus 142 ~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~ 221 (339)
T cd08249 142 LPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTASPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGK 221 (339)
T ss_pred CCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEECcccHHHHHhcCCCEEEECCCchHHHHHHHhcCCC
Confidence 30 01158899999998899999999999999999998887677888889999999998887777777543 57
Q ss_pred ccEEEEcCCC-CcccccccccccccCC--CceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEE
Q psy9949 254 YDVILDAAGI-PLDQINSYLPFLKTGK--FSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGF 330 (383)
Q Consensus 254 ~d~v~d~~g~-~~~~~~~~~~~l~~~~--~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (383)
+|+++|++|+ ...... +++++ + +|+++.++...... ............. ..+.+. + ...
T Consensus 222 ~d~vl~~~g~~~~~~~~--~~~l~--~~~~g~~v~~g~~~~~~---------~~~~~~~~~~~~~---~~~~~~-~-~~~ 283 (339)
T cd08249 222 LRYALDCISTPESAQLC--AEALG--RSGGGKLVSLLPVPEET---------EPRKGVKVKFVLG---YTVFGE-I-PED 283 (339)
T ss_pred eeEEEEeeccchHHHHH--HHHHh--ccCCCEEEEecCCCccc---------cCCCCceEEEEEe---eeeccc-c-ccc
Confidence 9999999998 443444 89999 9 99999986432110 0000000000000 000000 0 000
Q ss_pred EcCCHHHHHHHHHHHHcCCcccccceeec--CCCHHHHHHHHhcCC-CCCeEEEeC
Q psy9949 331 FMPIPYAVKEINKFIERGQIKPVIDSKYN--FCELPTAFEKVQQGH-LRGKIILNA 383 (383)
Q Consensus 331 ~~~~~~~~~~~~~l~~~g~l~~~~~~~~~--l~~~~~a~~~l~~~~-~~gkvvl~~ 383 (383)
.......++++.++++++++.+.+...++ ++++++|++.+.+++ ..+|+|+++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 284 REFGEVFWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred ccchHHHHHHHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 01124678889999999999876666778 999999999999988 889999975
No 64
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=2.4e-35 Score=277.36 Aligned_cols=312 Identities=26% Similarity=0.401 Sum_probs=247.4
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
|||+++.+++ +..+.++ +.+.|.+.++|++||+.++++|++|+.+..|..+ .....|..+|||
T Consensus 1 m~a~~~~~~~-~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~---------------~~~~~~~~~g~e 63 (341)
T cd08297 1 MKAAVVEEFG-EKPYEVK-DVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWP---------------VKPKLPLIGGHE 63 (341)
T ss_pred CceEEeeccC-CCCceEE-EeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCC---------------cCCCCCccCCcc
Confidence 7899999877 5568888 7899999999999999999999999998877511 113446789999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEee-------------------------cCCCCCCceEEEeecCcccccCCCCCCHHH
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVI-------------------------QPHKQGSFSKLILADSALVHKKPSNISDEE 161 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~-------------------------~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~ 161 (383)
++|+|+++|++++.+++||+|+... +....|++++|+.++.+.++++|+++++++
T Consensus 64 ~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~ 143 (341)
T cd08297 64 GAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQ 143 (341)
T ss_pred cceEEEEeCCCCCCCCCCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHH
Confidence 9999999999999999999998741 001258999999999999999999999999
Q ss_pred HHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCC
Q psy9949 162 AAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYN 240 (383)
Q Consensus 162 aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~ 240 (383)
++.++..+.|||+++.. .++ +++++|+|+|+++++|++++++|+.+|++|++++++ ++.+.++++|++.++++.
T Consensus 144 ~a~l~~~~~ta~~~~~~-~~~----~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~ 218 (341)
T cd08297 144 AAPLLCAGVTVYKALKK-AGL----KPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKELGADAFVDFK 218 (341)
T ss_pred HHHHHcchHHHHHHHHh-cCC----CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCcEEEcCC
Confidence 99999999999999875 466 899999999988889999999999999999999865 456777889999999888
Q ss_pred ChHHHHHHhc---CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhcc
Q psy9949 241 EPEAMHSIAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFES 317 (383)
Q Consensus 241 ~~~~~~~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (383)
+.++.+++.+ ..++|+++|+.++....... +++++ ++|+++.++...... .. . ....+
T Consensus 219 ~~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~-~~~l~--~~g~~v~~g~~~~~~---~~----~--~~~~~------- 279 (341)
T cd08297 219 KSDDVEAVKELTGGGGAHAVVVTAVSAAAYEQA-LDYLR--PGGTLVCVGLPPGGF---IP----L--DPFDL------- 279 (341)
T ss_pred CccHHHHHHHHhcCCCCCEEEEcCCchHHHHHH-HHHhh--cCCEEEEecCCCCCC---CC----C--CHHHH-------
Confidence 7777766654 35799999987765543333 88999 999999986421000 00 0 00111
Q ss_pred ccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 318 GELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
..++..+. +......+++++++++++++.+.+.+ +.|++++++++++.+.++...||+++++
T Consensus 280 --~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 280 --VLRGITIV-GSLVGTRQDLQEALEFAARGKVKPHI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred --HhcccEEE-EeccCCHHHHHHHHHHHHcCCCccee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 11222221 11222468899999999999987644 5799999999999999999999999985
No 65
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.1e-35 Score=275.28 Aligned_cols=301 Identities=22% Similarity=0.280 Sum_probs=237.6
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
||++++.+.+ |..++++ +.+.|.++++||+||+.++++|+.|++...+. ..|.++|||
T Consensus 1 ~~~~~~~~~~-~~~~~~~-~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~--------------------~~~~~~g~e 58 (305)
T cd08270 1 MRALVVDPDA-PLRLRLG-EVPDPQPAPHEALVRVAAISLNRGELKFAAER--------------------PDGAVPGWD 58 (305)
T ss_pred CeEEEEccCC-CceeEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHhhccC--------------------CCCCcccce
Confidence 6889998765 7778888 78999999999999999999999999876422 125689999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccC
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVY 186 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~ 186 (383)
++|+|+++|+++..|++||+|+++.. +|+|++|+.++.++++++|+++++++++.+++.+.|||+++.....
T Consensus 59 ~~G~v~~~G~~v~~~~~Gd~V~~~~~---~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~----- 130 (305)
T cd08270 59 AAGVVERAAADGSGPAVGARVVGLGA---MGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGP----- 130 (305)
T ss_pred eEEEEEEeCCCCCCCCCCCEEEEecC---CcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCC-----
Confidence 99999999999999999999999852 5999999999999999999999999999999999999999986554
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL 265 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~ 265 (383)
.++++|+|+|+.|++|++++++|+..|++|++++++ ++.+.++++|++.+++... .+.. +++|+++|++|+..
T Consensus 131 ~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-----~~~~-~~~d~vl~~~g~~~ 204 (305)
T cd08270 131 LLGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLRELGAAEVVVGGS-----ELSG-APVDLVVDSVGGPQ 204 (305)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEeccc-----cccC-CCceEEEECCCcHH
Confidence 459999999988999999999999999999999864 5678888899876654322 1112 47999999999876
Q ss_pred ccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEE---cCCHHHHHHHH
Q psy9949 266 DQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFF---MPIPYAVKEIN 342 (383)
Q Consensus 266 ~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 342 (383)
.... +++++ ++|+++.+|.... ... .. . ...+.. ..++..+..... ....+.+..++
T Consensus 205 ~~~~--~~~l~--~~G~~v~~g~~~~-~~~--~~--~----~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (305)
T cd08270 205 LARA--LELLA--PGGTVVSVGSSSG-EPA--VF--N----PAAFVG-------GGGGRRLYTFFLYDGEPLAADLARLL 264 (305)
T ss_pred HHHH--HHHhc--CCCEEEEEeccCC-Ccc--cc--c----HHHHhc-------ccccceEEEEEccCHHHHHHHHHHHH
Confidence 5555 99999 9999999864320 000 00 0 000100 001111111111 11256789999
Q ss_pred HHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 343 KFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 343 ~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
++++++++.+.+.++++++++++|++.+.+++..||+|++|
T Consensus 265 ~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 265 GLVAAGRLDPRIGWRGSWTEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred HHHHCCCccceeccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 99999999877788999999999999999999999999976
No 66
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=2e-35 Score=278.83 Aligned_cols=321 Identities=22% Similarity=0.349 Sum_probs=245.0
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
|||+++..++.+ ++++ +.|.|+++++||+||+.++++|++|++...|..+.. . +. +.........+|.++|||
T Consensus 1 ~~a~~~~~~~~~--~~~~-~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~-~--~~-~~~~~~~~~~~~~~~g~e 73 (350)
T cd08240 1 MKAAAVVEPGKP--LEEV-EIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLG-G--GK-TMSLDDRGVKLPLVLGHE 73 (350)
T ss_pred CeeEEeccCCCC--ceEE-ecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCcc-c--cc-cccccccCCCCCcccccc
Confidence 789988877755 6788 789999999999999999999999999887741100 0 00 000000123456789999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeecC------------------------CCCCCceEEEeecCcccccCCCCCCHHHH
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQP------------------------HKQGSFSKLILADSALVHKKPSNISDEEA 162 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~------------------------~~~g~~a~~~~v~~~~~~~ip~~~~~~~a 162 (383)
++|+|+++|++++++++||+|+++... ...|++++|+.++.+.++++|+++++.++
T Consensus 74 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~a 153 (350)
T cd08240 74 IVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALA 153 (350)
T ss_pred eeEEEEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHe
Confidence 999999999999999999999876210 13589999999999999999999999999
Q ss_pred HhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHHhcCCCeeeeCC
Q psy9949 163 AGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVTSLNPNLVIDYN 240 (383)
Q Consensus 163 a~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~~lg~~~v~~~~ 240 (383)
+.+.+.++|||+++.....+ +++++|+|+| +|++|++++|+|+.+|+ +|+++.++ ++.+.++++|++.+++++
T Consensus 154 a~l~~~~~tA~~~~~~~~~~----~~~~~vlI~g-~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~ 228 (350)
T cd08240 154 ATLACSGLTAYSAVKKLMPL----VADEPVVIIG-AGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGS 228 (350)
T ss_pred ehhhchhhhHHHHHHhcccC----CCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCC
Confidence 99999999999999877666 6899999996 89999999999999999 78888754 567788889998888877
Q ss_pred ChHHHHHHhcC--CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccc
Q psy9949 241 EPEAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESG 318 (383)
Q Consensus 241 ~~~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (383)
+.++.+.+.+. +++|++||++|+......+ +++++ ++|+++.++...... .. .... .
T Consensus 229 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~-~~~l~--~~g~~v~~g~~~~~~--------~~---~~~~--~----- 287 (350)
T cd08240 229 DPDAAKRIIKAAGGGVDAVIDFVNNSATASLA-FDILA--KGGKLVLVGLFGGEA--------TL---PLPL--L----- 287 (350)
T ss_pred CccHHHHHHHHhCCCCcEEEECCCCHHHHHHH-HHHhh--cCCeEEEECCCCCCC--------cc---cHHH--H-----
Confidence 76665555432 3799999999965443332 89999 999999986421100 00 0010 0
Q ss_pred cccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949 319 ELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382 (383)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~ 382 (383)
..++..+. +......+++.+++++++++.+++...+.|+++++++|++.+.+++..||++++
T Consensus 288 -~~~~~~i~-~~~~~~~~~~~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 288 -PLRALTIQ-GSYVGSLEELRELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred -hhcCcEEE-EcccCCHHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence 11111221 222234578999999999999887777789999999999999999989999985
No 67
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=3.3e-35 Score=273.59 Aligned_cols=314 Identities=21% Similarity=0.241 Sum_probs=243.5
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
||++++.+.+.+..+.+. +.+.|.+.++||+||+.++++|++|+....|. ......|.++|||
T Consensus 1 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~----------------~~~~~~~~~~g~e 63 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLR-EIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGH----------------SPSVKFPRVLGIE 63 (320)
T ss_pred CeEEEEcCCCCccceEEe-ecCCCCCCCCEEEEEEEEEecCHHHHHHhcCC----------------CCCCCCCccccce
Confidence 688899887776677887 77888899999999999999999999988775 1123457889999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeec---CCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcC
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQ---PHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALG 183 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~---~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~ 183 (383)
++|+|+++|. ..+++||+|+++.. ...+|+|++|+.++.+.++++|+++++++++.+++++.|||+++.....+
T Consensus 64 ~~G~v~~vG~--~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~- 140 (320)
T cd08243 64 AVGEVEEAPG--GTFTPGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGL- 140 (320)
T ss_pred eEEEEEEecC--CCCCCCCEEEEecCCCCCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCC-
Confidence 9999999995 57999999998852 12348999999999999999999999999999999999999999877777
Q ss_pred ccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcC-CCccEEEEcC
Q psy9949 184 LVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGA-GPYDVILDAA 261 (383)
Q Consensus 184 ~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~-~g~d~v~d~~ 261 (383)
+++++|+|+|++|++|++++++|+.+|++|++++++ ++.+.++++|++.+++. ..++.+.+.+. .++|+++|++
T Consensus 141 ---~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~i~~~~~~~d~vl~~~ 216 (320)
T cd08243 141 ---QPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLKELGADEVVID-DGAIAEQLRAAPGGFDKVLELV 216 (320)
T ss_pred ---CCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEec-CccHHHHHHHhCCCceEEEECC
Confidence 899999999999999999999999999999999855 45677888999888754 44555555543 5799999999
Q ss_pred CCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHH
Q psy9949 262 GIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEI 341 (383)
Q Consensus 262 g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (383)
|+...... +++++ ++|+++.+|........ . . ........... .....+.. ......+.++++
T Consensus 217 ~~~~~~~~--~~~l~--~~g~~v~~g~~~~~~~~-~----~--~~~~~~~~~~~--~~~~~~~~----~~~~~~~~~~~~ 279 (320)
T cd08243 217 GTATLKDS--LRHLR--PGGIVCMTGLLGGQWTL-E----D--FNPMDDIPSGV--NLTLTGSS----SGDVPQTPLQEL 279 (320)
T ss_pred ChHHHHHH--HHHhc--cCCEEEEEccCCCCccc-C----C--cchhhhhhhcc--ceEEEecc----hhhhhHHHHHHH
Confidence 98654544 89999 99999998643111000 0 0 00111110000 11111110 001124578889
Q ss_pred HHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEE
Q psy9949 342 NKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381 (383)
Q Consensus 342 ~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl 381 (383)
+++++++.+++.+.+.|+++++++|++.+.+++..||+|+
T Consensus 280 ~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 280 FDFVAAGHLDIPPSKVFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred HHHHHCCceecccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 9999999998777789999999999999998888899886
No 68
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=2.3e-35 Score=277.87 Aligned_cols=312 Identities=22% Similarity=0.268 Sum_probs=245.3
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
||||++.+++.+ +.++ +.+.|.+.+++|+||+.++++|++|+....|.. ....+|.++|+|
T Consensus 1 m~a~~~~~~~~~--~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~----------------~~~~~~~~~g~e 61 (345)
T cd08260 1 MRAAVYEEFGEP--LEIR-EVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHD----------------PDVTLPHVPGHE 61 (345)
T ss_pred CeeEEEecCCCC--cEEE-EccCCCCCCCeEEEEEEEeeccHHHHHHhcCCC----------------CCCCCCeeeccc
Confidence 799999987765 7777 789999999999999999999999999888761 123457899999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEe----------e--------------cCCCCCCceEEEeecCc--ccccCCCCCCHH
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGV----------I--------------QPHKQGSFSKLILADSA--LVHKKPSNISDE 160 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~----------~--------------~~~~~g~~a~~~~v~~~--~~~~ip~~~~~~ 160 (383)
++|+|+++|+++..|++||+|++. + +...+|+|++|++++.. .++++|++++++
T Consensus 62 ~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~ 141 (345)
T cd08260 62 FAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFV 141 (345)
T ss_pred eeEEEEEECCCCccCCCCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEECCCCCCHH
Confidence 999999999999999999999861 0 01125999999999974 999999999999
Q ss_pred HHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeC
Q psy9949 161 EAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDY 239 (383)
Q Consensus 161 ~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~ 239 (383)
+++.++.+++|||+++....++ +++++|+|+| +|++|++++++|+..|++|++++++ ++.+.++++|++.++++
T Consensus 142 ~aa~l~~~~~ta~~~l~~~~~~----~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~ 216 (345)
T cd08260 142 TAAGLGCRFATAFRALVHQARV----KPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELARELGAVATVNA 216 (345)
T ss_pred HhhhhccchHHHHHHHHHccCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHhCCCEEEcc
Confidence 9999999999999999777787 8999999999 8999999999999999999999854 56778888999999988
Q ss_pred CC-hHHHHHHhcC--CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhc
Q psy9949 240 NE-PEAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFE 316 (383)
Q Consensus 240 ~~-~~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (383)
+. .++.+.+... +++|++||++|+....... +++++ ++|+++.+|........ ..+++... +.
T Consensus 217 ~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~-~~~l~--~~g~~i~~g~~~~~~~~----------~~~~~~~~-~~ 282 (345)
T cd08260 217 SEVEDVAAAVRDLTGGGAHVSVDALGIPETCRNS-VASLR--KRGRHVQVGLTLGEEAG----------VALPMDRV-VA 282 (345)
T ss_pred ccchhHHHHHHHHhCCCCCEEEEcCCCHHHHHHH-HHHhh--cCCEEEEeCCcCCCCCc----------cccCHHHH-hh
Confidence 87 6666665532 2799999999864433332 88999 99999998643211100 00011000 00
Q ss_pred cccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccc--cceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949 317 SGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPV--IDSKYNFCELPTAFEKVQQGHLRGKIILN 382 (383)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~a~~~l~~~~~~gkvvl~ 382 (383)
+...+.+ ......+.+++++++++++++.+. +.+.++++++++|++.+.+++..||+|++
T Consensus 283 ~~~~~~~------~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 283 RELEIVG------SHGMPAHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred cccEEEe------CCcCCHHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 1111111 112346789999999999988753 57889999999999999999999999875
No 69
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=1.8e-35 Score=276.44 Aligned_cols=320 Identities=22% Similarity=0.206 Sum_probs=232.2
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
|||+++.+.|++..+.++ +.+.|.+.++||+||+.++++|++|.....+.+. ....+|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~-~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~---------------~~~~~~~~~g~e 64 (326)
T cd08289 1 FQALVVEKDEDDVSVSVK-NLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGK---------------IVKRYPFIPGID 64 (326)
T ss_pred CeeEEEeccCCcceeEEE-EccCCCCCCCeEEEEEEEEecChHHhhhhcCCcc---------------ccCCCCcCcccc
Confidence 789999998887778888 8999999999999999999999999876643210 113457899999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeec---CCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcC
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQ---PHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALG 183 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~---~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~ 183 (383)
++|+|+++| +.+|++||+|++... ...+|+|++|+.++.+.++++|+++++++++.++++++|||+++....+..
T Consensus 65 ~~G~V~~~~--~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~ 142 (326)
T cd08289 65 LAGTVVESN--DPRFKPGDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENG 142 (326)
T ss_pred eeEEEEEcC--CCCCCCCCEEEEcccccCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcC
Confidence 999999964 567999999998741 113599999999999999999999999999999999999999986443310
Q ss_pred ccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhc--CCCccEEEEc
Q psy9949 184 LVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAG--AGPYDVILDA 260 (383)
Q Consensus 184 ~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~--~~g~d~v~d~ 260 (383)
. ..++++|+|+|++|++|++++++|+.+|++|++++++ ++.++++++|++.++++++. ..+.+.. ..++|+++|+
T Consensus 143 ~-~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~~~~~~~~d~vld~ 220 (326)
T cd08289 143 L-TPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKKLGAKEVIPREEL-QEESIKPLEKQRWAGAVDP 220 (326)
T ss_pred C-CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCCEEEcchhH-HHHHHHhhccCCcCEEEEC
Confidence 0 0357899999988999999999999999999999854 56788889999888887654 2333333 2479999999
Q ss_pred CCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHH
Q psy9949 261 AGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKE 340 (383)
Q Consensus 261 ~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (383)
+|+...... +++++ ++|+++.+|...... . .. ....+.. +...+.+............+.+..
T Consensus 221 ~g~~~~~~~--~~~l~--~~G~~i~~g~~~~~~---~----~~--~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 283 (326)
T cd08289 221 VGGKTLAYL--LSTLQ--YGGSVAVSGLTGGGE---V----ET--TVFPFIL----RGVNLLGIDSVECPMELRRRIWRR 283 (326)
T ss_pred CcHHHHHHH--HHHhh--cCCEEEEEeecCCCC---C----Cc--chhhhhh----ccceEEEEEeEecCchHHHHHHHH
Confidence 998655554 89999 999999996431100 0 00 0000101 122222211100000111233344
Q ss_pred HHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 341 INKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 341 ~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
+...+....+...+.++|+++++++||+.+.+++..||+|+++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 284 LATDLKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred HHhhcCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 4333332333335688999999999999999999999999875
No 70
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=3.9e-35 Score=273.78 Aligned_cols=316 Identities=21% Similarity=0.239 Sum_probs=236.4
Q ss_pred eeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCce
Q psy9949 28 AAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDF 107 (383)
Q Consensus 28 ~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~ 107 (383)
||+++...+.++.++++ +.|.|.+.+++|+||+.++++|++|+....|..+ ....+|..+|||+
T Consensus 1 ~a~~~~~~~~~~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~---------------~~~~~~~~~g~e~ 64 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVE-TLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGG---------------VVRSYPMIPGIDA 64 (323)
T ss_pred CeEEEccCCCCcceeEe-ecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCC---------------CCCCCCccceeee
Confidence 57888887877788999 8999999999999999999999999998877511 1124578899999
Q ss_pred eEEEEecCCCCCCCCCCCEEEEeec---CCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhh--c
Q psy9949 108 CGKIVAKGPRVTDLNIDDVVYGVIQ---PHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAA--L 182 (383)
Q Consensus 108 ~G~Vv~vG~~v~~~~~Gd~V~~~~~---~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~--~ 182 (383)
+|+|++ .++..|++||+|+++.. ...+|+|++|+.++.+.++++|+++++++++.+++.+.+||+++....+ +
T Consensus 65 ~G~V~~--~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~ 142 (323)
T TIGR02823 65 AGTVVS--SEDPRFREGDEVIVTGYGLGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGL 142 (323)
T ss_pred EEEEEe--cCCCCCCCCCEEEEccCCCCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCC
Confidence 999998 56678999999998741 1125899999999999999999999999999999999999988764433 5
Q ss_pred CccCCCCC-EEEEEcCCchHHHHHHHHHHHCCCEEEEEec-CchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEc
Q psy9949 183 GLVYPRDK-RVLVLGASGGVGTMAVQLLKAWDIEVVTTCS-GDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDA 260 (383)
Q Consensus 183 ~~~~~~~~-~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~ 260 (383)
.+++ +|+|+|++|++|++++++|+.+|++++++++ .++.+.++++|++.+++.++.+..-.....+++|+++||
T Consensus 143 ----~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~vld~ 218 (323)
T TIGR02823 143 ----TPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLKELGASEVIDREDLSPPGKPLEKERWAGAVDT 218 (323)
T ss_pred ----CCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcEEEccccHHHHHHHhcCCCceEEEEC
Confidence 7888 9999998899999999999999999888874 455678889999888877654431111122359999999
Q ss_pred CCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHH
Q psy9949 261 AGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKE 340 (383)
Q Consensus 261 ~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (383)
+|+...... +++++ ++|+++.+|...... . .. ....+... ...+.+............+.+..
T Consensus 219 ~g~~~~~~~--~~~l~--~~G~~v~~g~~~~~~---~----~~--~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 281 (323)
T TIGR02823 219 VGGHTLANV--LAQLK--YGGAVAACGLAGGPD---L----PT--TVLPFILR----GVSLLGIDSVYCPMALREAAWQR 281 (323)
T ss_pred ccHHHHHHH--HHHhC--CCCEEEEEcccCCCC---c----cc--cHHHHhhc----ceEEEEEeccccCchhHHHHHHH
Confidence 998765444 89999 999999996431100 0 00 00011111 11222211100000111345667
Q ss_pred HHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 341 INKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 341 ~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
+.+++..+.+... .+.|+++++++|++.+.+++..||+|+++
T Consensus 282 ~~~~~~~~~~~~~-~~~~~l~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 282 LATDLKPRNLESI-TREITLEELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred HHHHhhcCCCcCc-eeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence 7777888887655 45899999999999999999999999874
No 71
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=2.5e-35 Score=275.77 Aligned_cols=318 Identities=22% Similarity=0.293 Sum_probs=245.0
Q ss_pred ceeeEEEeecCC--CceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccc
Q psy9949 26 RTAAWQISSYGG--ADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTL 103 (383)
Q Consensus 26 ~~~a~~~~~~g~--~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~ 103 (383)
.|||+++.+++. ++.++++ +.+.|.+.++||+|||.++|+|++|+....|... ....+|.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~---------------~~~~~p~~~ 64 (329)
T cd08250 1 SFRKLVVHRLSPNFREATSIV-DVPVPLPGPGEVLVKNRFVGINASDINFTAGRYD---------------PGVKPPFDC 64 (329)
T ss_pred CceEEEeccCCCCcccCceEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCC---------------CCCCCCccc
Confidence 489999999887 6778899 7899999999999999999999999998877511 123568899
Q ss_pred cCceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcC
Q psy9949 104 GRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALG 183 (383)
Q Consensus 104 G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~ 183 (383)
|||++|+|+++|++++++++||+|+++. .|+|++|+.++.+.++++|+. +.+++.++.++.|||+++.+..++
T Consensus 65 g~e~~G~v~~vG~~v~~~~~Gd~V~~~~----~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~- 137 (329)
T cd08250 65 GFEGVGEVVAVGEGVTDFKVGDAVATMS----FGAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEM- 137 (329)
T ss_pred CceeEEEEEEECCCCCCCCCCCEEEEec----CcceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCC-
Confidence 9999999999999999999999999986 499999999999999999997 356778889999999999877888
Q ss_pred ccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcC--CCccEEEEc
Q psy9949 184 LVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGA--GPYDVILDA 260 (383)
Q Consensus 184 ~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~--~g~d~v~d~ 260 (383)
+++++|+|+|++|++|++++++|+..|++|++++++ ++.+.++++|++.+++.+..++.+.+... .++|++||+
T Consensus 138 ---~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~vd~v~~~ 214 (329)
T cd08250 138 ---KSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYPKGVDVVYES 214 (329)
T ss_pred ---CCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHcCCceEEeCCCccHHHHHHHhcCCCCeEEEEC
Confidence 999999999999999999999999999999999865 45677788999888887776665555432 479999999
Q ss_pred CCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcC----CHH
Q psy9949 261 AGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMP----IPY 336 (383)
Q Consensus 261 ~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 336 (383)
+|+...... +++++ ++|+++.++........ .+.. ......+.. ....++..+....... ..+
T Consensus 215 ~g~~~~~~~--~~~l~--~~g~~v~~g~~~~~~~~-~~~~-~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 281 (329)
T cd08250 215 VGGEMFDTC--VDNLA--LKGRLIVIGFISGYQSG-TGPS-PVKGATLPP-------KLLAKSASVRGFFLPHYAKLIPQ 281 (329)
T ss_pred CcHHHHHHH--HHHhc--cCCeEEEEecccCCccc-Cccc-ccccccccH-------HHhhcCceEEEEEhHHHHHHHHH
Confidence 997554444 89999 99999998643211000 0000 000000000 0011122221111110 245
Q ss_pred HHHHHHHHHHcCCcccc--cceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949 337 AVKEINKFIERGQIKPV--IDSKYNFCELPTAFEKVQQGHLRGKIILN 382 (383)
Q Consensus 337 ~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~a~~~l~~~~~~gkvvl~ 382 (383)
.+.+++++++++.+++. +.+.++++++++|++.+.+++..||++++
T Consensus 282 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 282 HLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred HHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 67889999999988763 45569999999999999988888999874
No 72
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=6.1e-35 Score=275.54 Aligned_cols=314 Identities=19% Similarity=0.264 Sum_probs=235.4
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
|||+++..++ .++++ +.+.|++.+++|+||+.+++||++|+....|....+ .. . .......+|.++|||
T Consensus 1 mka~~~~~~~---~~~~~-~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~----~~-~--~~~~~~~~p~~~g~e 69 (350)
T cd08256 1 MRAVVCHGPQ---DYRLE-EVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFW----GD-E--NQPPYVKPPMIPGHE 69 (350)
T ss_pred CeeEEEecCC---ceEEE-ECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccc----cc-c--ccCccCCCCcccCcc
Confidence 6899998655 37888 899999999999999999999999999887751000 00 0 000112457789999
Q ss_pred eeEEEEecCCCCC--CCCCCCEEEEeec--------------------------CCCCCCceEEEeecCc-ccccCCCCC
Q psy9949 107 FCGKIVAKGPRVT--DLNIDDVVYGVIQ--------------------------PHKQGSFSKLILADSA-LVHKKPSNI 157 (383)
Q Consensus 107 ~~G~Vv~vG~~v~--~~~~Gd~V~~~~~--------------------------~~~~g~~a~~~~v~~~-~~~~ip~~~ 157 (383)
++|+|+++|++++ +|++||+|++... ....|+|++|+.++.+ .++++|+++
T Consensus 70 ~~G~v~~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~ 149 (350)
T cd08256 70 FVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDI 149 (350)
T ss_pred eeEEEEEeCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCC
Confidence 9999999999998 8999999987210 0135999999999987 678999999
Q ss_pred CHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecC-chHHHHHhcCCCe
Q psy9949 158 SDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTCSG-DAKDLVTSLNPNL 235 (383)
Q Consensus 158 ~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~~-~~~~~~~~lg~~~ 235 (383)
++++++.+ .++.|+|+++ +..++ +++++|+|.| +|++|++++++|+.+|++ +++++++ ++.++++++|++.
T Consensus 150 ~~~~aa~~-~~~~ta~~a~-~~~~~----~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~ 222 (350)
T cd08256 150 PPEDAILI-EPLACALHAV-DRANI----KFDDVVVLAG-AGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADV 222 (350)
T ss_pred CHHHHhhh-hHHHHHHHHH-HhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcE
Confidence 99999988 7889999998 57888 8999999955 899999999999999985 5566644 4567778899998
Q ss_pred eeeCCChHHHHHHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhh
Q psy9949 236 VIDYNEPEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLK 312 (383)
Q Consensus 236 v~~~~~~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (383)
+++++..++.+.+.+. .++|++||++|+....... +++++ ++|+++.++..... .. +.+..
T Consensus 223 v~~~~~~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~-~~~l~--~~G~~v~~g~~~~~--------~~-----~~~~~ 286 (350)
T cd08256 223 VLNPPEVDVVEKIKELTGGYGCDIYIEATGHPSAVEQG-LNMIR--KLGRFVEFSVFGDP--------VT-----VDWSI 286 (350)
T ss_pred EecCCCcCHHHHHHHHhCCCCCCEEEECCCChHHHHHH-HHHhh--cCCEEEEEccCCCC--------Cc-----cChhH
Confidence 8888776676666543 4699999999975433332 88999 99999998642100 00 01110
Q ss_pred hhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcCCCCCeEEE
Q psy9949 313 SNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQGHLRGKIIL 381 (383)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~~~~gkvvl 381 (383)
.. ..++..+. + .......+.+++++++++.+++ .+.+.|+++++++|++.+++++..+|+++
T Consensus 287 ~~-----~~~~~~i~-~-~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 287 IG-----DRKELDVL-G-SHLGPYCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred hh-----cccccEEE-E-eccCchhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 00 01111111 1 1122457888999999999976 36889999999999999999888889874
No 73
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=6.2e-35 Score=272.32 Aligned_cols=310 Identities=21% Similarity=0.260 Sum_probs=243.1
Q ss_pred eecCCCc--eeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCceeEE
Q psy9949 33 SSYGGAD--ELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGK 110 (383)
Q Consensus 33 ~~~g~~~--~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~ 110 (383)
++++.+. .+.++ +.+.|++.+++|+|||+++++|+.|+....|..+ .....|.++|||++|+
T Consensus 4 ~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~---------------~~~~~~~~~g~e~~G~ 67 (323)
T cd05282 4 TQFGEPLPLVLELV-SLPIPPPGPGEVLVRMLAAPINPSDLITISGAYG---------------SRPPLPAVPGNEGVGV 67 (323)
T ss_pred CcCCCCccceEEeE-eCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCC---------------CCCCCCCcCCcceEEE
Confidence 4455554 68888 7889999999999999999999999998876511 1123578999999999
Q ss_pred EEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCC
Q psy9949 111 IVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDK 190 (383)
Q Consensus 111 Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~ 190 (383)
|+++|++++++++||+|+++.. .|+|++|+.++.+.++++|+++++.+++.+++.+++||+++...+.+ ++++
T Consensus 68 v~~~G~~v~~~~~Gd~V~~~~~---~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~----~~~~ 140 (323)
T cd05282 68 VVEVGSGVSGLLVGQRVLPLGG---EGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKL----PPGD 140 (323)
T ss_pred EEEeCCCCCCCCCCCEEEEeCC---CCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccC----CCCC
Confidence 9999999999999999999862 39999999999999999999999999999999999999999877777 8999
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhc---CCCccEEEEcCCCCcc
Q psy9949 191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAG---AGPYDVILDAAGIPLD 266 (383)
Q Consensus 191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~---~~g~d~v~d~~g~~~~ 266 (383)
+|+|+|++|++|++++++|+.+|+++++++++ ++.+.++++|++.++++.+.++...+.. ..++|+++||+|+...
T Consensus 141 ~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~ 220 (323)
T cd05282 141 WVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESA 220 (323)
T ss_pred EEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCCCHHH
Confidence 99999988999999999999999999998855 4667788899999998887677766653 3479999999998776
Q ss_pred cccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEE----EcCCHHHHHHHH
Q psy9949 267 QINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGF----FMPIPYAVKEIN 342 (383)
Q Consensus 267 ~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 342 (383)
... +++++ ++|+++.++..... . ..+. ...+... ...+.+....... .....+.+.+++
T Consensus 221 ~~~--~~~l~--~~g~~v~~g~~~~~-~--~~~~------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (323)
T cd05282 221 TRL--ARSLR--PGGTLVNYGLLSGE-P--VPFP------RSVFIFK----DITVRGFWLRQWLHSATKEAKQETFAEVI 283 (323)
T ss_pred HHH--HHhhC--CCCEEEEEccCCCC-C--CCCC------HHHHhhc----CceEEEEEehHhhccCCHHHHHHHHHHHH
Confidence 554 89999 99999998642211 0 0000 0001101 1111111100000 001135788899
Q ss_pred HHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949 343 KFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382 (383)
Q Consensus 343 ~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~ 382 (383)
++++++++.+...+.|+++++++|++.+.+++..||+|++
T Consensus 284 ~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 284 KLVEAGVLTTPVGAKFPLEDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred HHHhCCCcccCccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence 9999999987778899999999999999988888999874
No 74
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=1.1e-34 Score=273.57 Aligned_cols=307 Identities=19% Similarity=0.239 Sum_probs=240.1
Q ss_pred eeeEEEeecCCCceeEeeccccCCCC-CCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPIL-KSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR 105 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~ 105 (383)
||++++.+++. +.+. +.|.|.+ .++||+|||.++++|++|+....|. .....+|.++|+
T Consensus 1 ~ka~~~~~~~~---~~~~-~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~----------------~~~~~~~~~~g~ 60 (347)
T cd05278 1 MKALVYLGPGK---IGLE-EVPDPKIQGPHDAIVRVTATSICGSDLHIYRGG----------------VPGAKHGMILGH 60 (347)
T ss_pred CceEEEecCCc---eEEE-EcCCCCCCCCCeEEEEEEEEEechhhHHHHcCC----------------CCCCCCCceecc
Confidence 67888887654 6778 7899989 8999999999999999999988775 122456789999
Q ss_pred ceeEEEEecCCCCCCCCCCCEEEEeec---------------------------CCCCCCceEEEeecCc--ccccCCCC
Q psy9949 106 DFCGKIVAKGPRVTDLNIDDVVYGVIQ---------------------------PHKQGSFSKLILADSA--LVHKKPSN 156 (383)
Q Consensus 106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~---------------------------~~~~g~~a~~~~v~~~--~~~~ip~~ 156 (383)
|++|+|+++|++++++++||+|++... ...+|+|++|++++.+ +++++|++
T Consensus 61 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~ 140 (347)
T cd05278 61 EFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDG 140 (347)
T ss_pred ceEEEEEEECCCccccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCC
Confidence 999999999999999999999987311 0225899999999987 99999999
Q ss_pred CCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHHhcCCC
Q psy9949 157 ISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVTSLNPN 234 (383)
Q Consensus 157 ~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~~lg~~ 234 (383)
+++++++.++.+++|||+++ ...++ +++++|+|.| +|++|++++|+|+.+|+ +++++.++ ++.++++++|++
T Consensus 141 ~~~~~aa~l~~~~~ta~~~~-~~~~~----~~~~~VlI~g-~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~ 214 (347)
T cd05278 141 LPDEDALMLSDILPTGFHGA-ELAGI----KPGSTVAVIG-AGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGAT 214 (347)
T ss_pred CCHHHHhhhcchhhheeehh-hhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCc
Confidence 99999999999999999998 47777 8999999976 79999999999999997 88888644 456778889999
Q ss_pred eeeeCCChHHHHHHhc---CCCccEEEEcCCCC-cccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHH
Q psy9949 235 LVIDYNEPEAMHSIAG---AGPYDVILDAAGIP-LDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDL 310 (383)
Q Consensus 235 ~v~~~~~~~~~~~i~~---~~g~d~v~d~~g~~-~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (383)
.++++++.++.+.+.. ..++|++||++|+. ..... +++++ ++|+++.++...... . . .. ....
T Consensus 215 ~vi~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~--~~~l~--~~G~~v~~g~~~~~~-~------~-~~-~~~~ 281 (347)
T cd05278 215 DIINPKNGDIVEQILELTGGRGVDCVIEAVGFEETFEQA--VKVVR--PGGTIANVGVYGKPD-P------L-PL-LGEW 281 (347)
T ss_pred EEEcCCcchHHHHHHHHcCCCCCcEEEEccCCHHHHHHH--HHHhh--cCCEEEEEcCCCCCc-c------c-Cc-cchh
Confidence 9998888777776654 25799999999874 33444 88999 999999885321000 0 0 00 0000
Q ss_pred hhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccc--cceeecCCCHHHHHHHHhcCCC-CCeEEEe
Q psy9949 311 LKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPV--IDSKYNFCELPTAFEKVQQGHL-RGKIILN 382 (383)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~a~~~l~~~~~-~gkvvl~ 382 (383)
..++..+. +...+..+.+++++++++++.+++. +...|+++++++|++.+..++. .+|+|++
T Consensus 282 ---------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~ 346 (347)
T cd05278 282 ---------FGKNLTFK-TGLVPVRARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIR 346 (347)
T ss_pred ---------hhceeEEE-eeccCchhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEec
Confidence 01111211 1112236789999999999998763 5678999999999999988877 6798875
No 75
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=1.3e-34 Score=272.78 Aligned_cols=308 Identities=17% Similarity=0.254 Sum_probs=238.1
Q ss_pred eeeEEEeecCCCceeEeeccccCCCC-CCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPIL-KSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR 105 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~ 105 (383)
||++++.+++. ++++ +.+.|+| .++||+||++++++|++|+....|.. ....+|.++||
T Consensus 1 m~a~~~~~~~~---~~~~-~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~----------------~~~~~~~~~g~ 60 (345)
T cd08286 1 MKALVYHGPGK---ISWE-DRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDV----------------PTVTPGRILGH 60 (345)
T ss_pred CceEEEecCCc---eeEE-ecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCC----------------CCCCCCceecc
Confidence 68899987664 7888 7899886 79999999999999999999988861 22344789999
Q ss_pred ceeEEEEecCCCCCCCCCCCEEEEeec-------------------------CCCCCCceEEEeecCc--ccccCCCCCC
Q psy9949 106 DFCGKIVAKGPRVTDLNIDDVVYGVIQ-------------------------PHKQGSFSKLILADSA--LVHKKPSNIS 158 (383)
Q Consensus 106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~-------------------------~~~~g~~a~~~~v~~~--~~~~ip~~~~ 158 (383)
|++|+|+++|++++.+++||+|++... ...+|+|++|+.++.+ .++++|++++
T Consensus 61 e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~ 140 (345)
T cd08286 61 EGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVD 140 (345)
T ss_pred cceEEEEEeccCccccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCC
Confidence 999999999999999999999987531 0124899999999987 8999999999
Q ss_pred HHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecC-chHHHHHhcCCCee
Q psy9949 159 DEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWD-IEVVTTCSG-DAKDLVTSLNPNLV 236 (383)
Q Consensus 159 ~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G-~~Vi~~~~~-~~~~~~~~lg~~~v 236 (383)
..+++.++++++|||+++....++ +++++|+|.| +|++|++++|+|+.+| .+|+++.++ ++.++++++|++.+
T Consensus 141 ~~~aa~l~~~~~ta~~~~~~~~~~----~~g~~vlI~g-~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~ 215 (345)
T cd08286 141 EEAAVMLSDILPTGYECGVLNGKV----KPGDTVAIVG-AGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHT 215 (345)
T ss_pred HHHhhhccchhHHHHHHHHhhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCce
Confidence 999999999999999987767777 8999999987 6999999999999999 688887654 45677889999999
Q ss_pred eeCCChHHHHHHhc---CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhh
Q psy9949 237 IDYNEPEAMHSIAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKS 313 (383)
Q Consensus 237 ~~~~~~~~~~~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (383)
++++..++.+.+.+ ..++|++||++|........ +++++ ++|+++.+|..... . .++...
T Consensus 216 v~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~-~~~l~--~~g~~v~~g~~~~~----~---------~~~~~~- 278 (345)
T cd08286 216 VNSAKGDAIEQVLELTDGRGVDVVIEAVGIPATFELC-QELVA--PGGHIANVGVHGKP----V---------DLHLEK- 278 (345)
T ss_pred eccccccHHHHHHHHhCCCCCCEEEECCCCHHHHHHH-HHhcc--CCcEEEEecccCCC----C---------CcCHHH-
Confidence 98877666665543 34799999999875543332 68899 99999998642100 0 011111
Q ss_pred hhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcCCC--CCeEEEeC
Q psy9949 314 NFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQGHL--RGKIILNA 383 (383)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~~~--~gkvvl~~ 383 (383)
...++..+... ....+.+++++++++++.+++ ++.++|++++++++++.+.+... ..|++|++
T Consensus 279 -----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 279 -----LWIKNITITTG--LVDTNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred -----HhhcCcEEEee--cCchhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 01122222111 112367888999999998865 36789999999999999987642 34999874
No 76
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=2.2e-34 Score=270.14 Aligned_cols=315 Identities=26% Similarity=0.350 Sum_probs=243.0
Q ss_pred eeeEEEeecCCCc---eeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccc
Q psy9949 27 TAAWQISSYGGAD---ELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTL 103 (383)
Q Consensus 27 ~~a~~~~~~g~~~---~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~ 103 (383)
||++++++++++. .+.++ +.+.|++.+++|+||+.++++|++|+....+. .+...+|.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~----------------~~~~~~~~~~ 63 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDI-ELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGG----------------APVPGQPKIL 63 (336)
T ss_pred CceEEecCCCCCCcccceeEc-cCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCC----------------CCCCCCCccc
Confidence 6899999988775 47777 78888999999999999999999999887664 1123356789
Q ss_pred cCceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcC
Q psy9949 104 GRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALG 183 (383)
Q Consensus 104 G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~ 183 (383)
|||++|+|+++|+++..|++||+|+++.....+|+|++|+.++.++++++|+++++++++.+++.+.|||+++.+.+.+
T Consensus 64 g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~- 142 (336)
T cd08252 64 GWDASGVVEAVGSEVTLFKVGDEVYYAGDITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGI- 142 (336)
T ss_pred ccceEEEEEEcCCCCCCCCCCCEEEEcCCCCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCC-
Confidence 9999999999999999999999999874222369999999999999999999999999999999999999998777777
Q ss_pred ccCCC-----CCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcC--CCc
Q psy9949 184 LVYPR-----DKRVLVLGASGGVGTMAVQLLKAWD-IEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGA--GPY 254 (383)
Q Consensus 184 ~~~~~-----~~~VlI~ga~g~vG~~ai~la~~~G-~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~--~g~ 254 (383)
++ +++|+|+|++|++|++++++|+.+| ++|++++++ ++.++++++|++.++++.. ++.+++... .++
T Consensus 143 ---~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~i~~~~~~~~ 218 (336)
T cd08252 143 ---SEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVKELGADHVINHHQ-DLAEQLEALGIEPV 218 (336)
T ss_pred ---CCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCcEEEeCCc-cHHHHHHhhCCCCC
Confidence 66 9999999999999999999999999 899999855 5677888899998888764 455555432 479
Q ss_pred cEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEE-E-EEc
Q psy9949 255 DVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRW-G-FFM 332 (383)
Q Consensus 255 d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~ 332 (383)
|+++|++|+....... +++++ ++|+++.++... ...... .+.. +...+.+..... . ...
T Consensus 219 d~vl~~~~~~~~~~~~-~~~l~--~~g~~v~~g~~~------~~~~~~------~~~~----~~~~~~~~~~~~~~~~~~ 279 (336)
T cd08252 219 DYIFCLTDTDQHWDAM-AELIA--PQGHICLIVDPQ------EPLDLG------PLKS----KSASFHWEFMFTRSMFQT 279 (336)
T ss_pred CEEEEccCcHHHHHHH-HHHhc--CCCEEEEecCCC------Ccccch------hhhc----ccceEEEEEeeccccccc
Confidence 9999999964443332 88999 999999986421 000000 0000 011111110000 0 000
Q ss_pred ----CCHHHHHHHHHHHHcCCcccccc---eeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949 333 ----PIPYAVKEINKFIERGQIKPVID---SKYNFCELPTAFEKVQQGHLRGKIILN 382 (383)
Q Consensus 333 ----~~~~~~~~~~~l~~~g~l~~~~~---~~~~l~~~~~a~~~l~~~~~~gkvvl~ 382 (383)
...+.++++++++.+|.+.+.+. +.++++++++|++.+.++...||++++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 280 PDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred cchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 12356889999999999886533 347999999999999999989999875
No 77
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=1.2e-34 Score=272.51 Aligned_cols=315 Identities=20% Similarity=0.264 Sum_probs=233.6
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
|||+++..+ .++++ +.+.|++++++|+|||.++++|++|+....|.... .+-.+. . ......+|.++|+|
T Consensus 1 m~a~~~~~~----~~~~~-~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~-~~~~~~-~---~~~~~~~~~~~g~e 70 (341)
T cd08262 1 MRAAVFRDG----PLVVR-DVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAM-VDDAGG-P---SLMDLGADIVLGHE 70 (341)
T ss_pred CceEEEeCC----ceEEE-ecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcc-cccccc-c---ccccCCCCcccccc
Confidence 688888754 47888 89999999999999999999999999988773100 000000 0 00112357889999
Q ss_pred eeEEEEecCCCCCC-CCCCCEEEEeecC--------------CCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHH
Q psy9949 107 FCGKIVAKGPRVTD-LNIDDVVYGVIQP--------------HKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLT 171 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~-~~~Gd~V~~~~~~--------------~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~t 171 (383)
++|+|+++|+++++ |++||+|+++... ..+|+|++|++++.+.++++|+++++++++ ++.++.+
T Consensus 71 ~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~ 149 (341)
T cd08262 71 FCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAV 149 (341)
T ss_pred eeEEEEEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHH
Confidence 99999999999987 9999999987210 135999999999999999999999999887 6678889
Q ss_pred HHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEec-CchHHHHHhcCCCeeeeCCChHHHH---
Q psy9949 172 AWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTCS-GDAKDLVTSLNPNLVIDYNEPEAMH--- 246 (383)
Q Consensus 172 A~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~--- 246 (383)
||+++ ..+++ +++++|+|+| +|++|.+++|+|+.+|++ ++++.+ +++.++++++|++++++++..+...
T Consensus 150 a~~~~-~~~~~----~~g~~VlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~ 223 (341)
T cd08262 150 GLHAV-RRARL----TPGEVALVIG-CGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWA 223 (341)
T ss_pred HHHHH-HhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHH
Confidence 99986 57888 9999999997 699999999999999996 555553 4466788899998888877642211
Q ss_pred HH---hcCCCccEEEEcCCCC-cccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccC
Q psy9949 247 SI---AGAGPYDVILDAAGIP-LDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCK 322 (383)
Q Consensus 247 ~i---~~~~g~d~v~d~~g~~-~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (383)
.+ ....++|+++|++|+. ..... +++++ ++|+++.++...... ... .... ..+
T Consensus 224 ~~~~~~~~~~~d~vid~~g~~~~~~~~--~~~l~--~~g~~v~~g~~~~~~--------~~~--~~~~---------~~~ 280 (341)
T cd08262 224 AELARAGGPKPAVIFECVGAPGLIQQI--IEGAP--PGGRIVVVGVCMESD--------NIE--PALA---------IRK 280 (341)
T ss_pred HHHHHhCCCCCCEEEECCCCHHHHHHH--HHHhc--cCCEEEEECCCCCCC--------ccC--HHHH---------hhc
Confidence 12 2234799999999874 33333 88999 999999986431110 000 0000 111
Q ss_pred CccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949 323 TNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQGHLRGKIILN 382 (383)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~ 382 (383)
+..+. .......+.+.++++++++|.+.+ .+.+.+++++++++++.+.+++..||+|++
T Consensus 281 ~~~~~-~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 281 ELTLQ-FSLGYTPEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred ceEEE-EEecccHHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 11221 122334668899999999999875 457899999999999999999999999975
No 78
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=1.9e-34 Score=270.84 Aligned_cols=306 Identities=21% Similarity=0.324 Sum_probs=239.5
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
|||+++++++ .+.++ +.+.|+++++||+|||.++++|+.|+.+..|.. ....+|.++|+|
T Consensus 1 ~~a~~~~~~~---~~~~~-~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~----------------~~~~~~~~~g~e 60 (337)
T cd08261 1 MKALVCEKPG---RLEVV-DIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRN----------------PFASYPRILGHE 60 (337)
T ss_pred CeEEEEeCCC---ceEEE-ECCCCCCCCCeEEEEEEEEeEcccChHHHcCCC----------------CcCCCCcccccc
Confidence 6888888654 47788 789999999999999999999999999887751 122447789999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeec------------------------CCCCCCceEEEeecCcccccCCCCCCHHHH
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQ------------------------PHKQGSFSKLILADSALVHKKPSNISDEEA 162 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~a 162 (383)
++|+|+++|++++.|++||+|++... ....|+|++|+.++.+ ++++|++++++++
T Consensus 61 ~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~a 139 (337)
T cd08261 61 LSGEVVEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQA 139 (337)
T ss_pred cEEEEEEeCCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHh
Confidence 99999999999999999999987310 0125999999999999 9999999999999
Q ss_pred HhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCC
Q psy9949 163 AGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNE 241 (383)
Q Consensus 163 a~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~ 241 (383)
+.+ ..++++++++ ...++ +++++|||+| +|++|.+++++|+.+|++|+++.++ ++.++++++|++++++++.
T Consensus 140 a~~-~~~~~a~~~~-~~~~l----~~g~~vLI~g-~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~~~g~~~v~~~~~ 212 (337)
T cd08261 140 ALV-EPLAIGAHAV-RRAGV----TAGDTVLVVG-AGPIGLGVIQVAKARGARVIVVDIDDERLEFARELGADDTINVGD 212 (337)
T ss_pred hhh-chHHHHHHHH-HhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHhCCCEEecCcc
Confidence 877 5677888888 57888 8999999996 7999999999999999999999744 4567788899999999887
Q ss_pred hHHHHHHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccc
Q psy9949 242 PEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESG 318 (383)
Q Consensus 242 ~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (383)
.++.+.+... .++|+++|++|+....... +++++ ++|+++.++... .. ... . . ..+....+
T Consensus 213 ~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~-~~~l~--~~G~~i~~g~~~-~~---~~~--~--~--~~~~~~~~--- 276 (337)
T cd08261 213 EDVAARLRELTDGEGADVVIDATGNPASMEEA-VELVA--HGGRVVLVGLSK-GP---VTF--P--D--PEFHKKEL--- 276 (337)
T ss_pred cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHH-HHHHh--cCCEEEEEcCCC-CC---Ccc--C--H--HHHHhCCC---
Confidence 7777766543 4699999999875443332 88999 999999886432 00 000 0 0 01111111
Q ss_pred cccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcC-CCCCeEEEeC
Q psy9949 319 ELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQG-HLRGKIILNA 383 (383)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~-~~~gkvvl~~ 383 (383)
.+. +......+.+++++++++++.+++ .+..++++++++++++.+.++ ...+|+|+++
T Consensus 277 ------~~~-~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 277 ------TIL-GSRNATREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred ------EEE-EeccCChhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 111 111234678899999999999987 677889999999999999988 4778999874
No 79
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=1.9e-34 Score=275.28 Aligned_cols=308 Identities=20% Similarity=0.243 Sum_probs=237.2
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCC-CCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILK-SKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR 105 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~-~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~ 105 (383)
|||+++..+ +.++++ +.+.|.+. +++|+||+.+++||++|+....|.. ...++|.++||
T Consensus 1 m~a~~~~~~---~~~~~~-~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~----------------~~~~~p~~~G~ 60 (386)
T cd08283 1 MKALVWHGK---GDVRVE-EVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYI----------------PGMKKGDILGH 60 (386)
T ss_pred CeeEEEecC---CCceEE-eCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCC----------------CCCCCCccccc
Confidence 788998754 457888 78999884 9999999999999999999988861 12345789999
Q ss_pred ceeEEEEecCCCCCCCCCCCEEEEeecC--------------------------------------------CCCCCceE
Q psy9949 106 DFCGKIVAKGPRVTDLNIDDVVYGVIQP--------------------------------------------HKQGSFSK 141 (383)
Q Consensus 106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~--------------------------------------------~~~g~~a~ 141 (383)
|++|+|+++|++++++++||+|++.... ..+|+|++
T Consensus 61 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 140 (386)
T cd08283 61 EFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAE 140 (386)
T ss_pred cceEEEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEE
Confidence 9999999999999999999999875310 12589999
Q ss_pred EEeecCc--ccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEE
Q psy9949 142 LILADSA--LVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVT 218 (383)
Q Consensus 142 ~~~v~~~--~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~ 218 (383)
|++++.+ .++++|+++++++++.++..++|||+++ ...++ +++++|+|+| +|++|++++++|+..|+ +|++
T Consensus 141 ~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~----~~g~~VlV~g-~G~vG~~~~~la~~~g~~~vi~ 214 (386)
T cd08283 141 YVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYHAA-ELAEV----KPGDTVAVWG-CGPVGLFAARSAKLLGAERVIA 214 (386)
T ss_pred EEEcccccCeEEECCCCCCHHHHhhhccchhhhHHHH-hhccC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEE
Confidence 9999987 8999999999999999999999999999 57888 8999999997 79999999999999998 6999
Q ss_pred EecC-chHHHHHhcCCCeeeeCCCh-HHHHHHhcC---CCccEEEEcCCCCc---------------------ccccccc
Q psy9949 219 TCSG-DAKDLVTSLNPNLVIDYNEP-EAMHSIAGA---GPYDVILDAAGIPL---------------------DQINSYL 272 (383)
Q Consensus 219 ~~~~-~~~~~~~~lg~~~v~~~~~~-~~~~~i~~~---~g~d~v~d~~g~~~---------------------~~~~~~~ 272 (383)
++++ ++.+++++++...++++... ++.+.+.+. .++|++||++|+.. .... .+
T Consensus 215 ~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 293 (386)
T cd08283 215 IDRVPERLEMARSHLGAETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALRE-AI 293 (386)
T ss_pred EcCCHHHHHHHHHcCCcEEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHH-HH
Confidence 8854 56788888844467777765 366666543 37999999998642 1122 27
Q ss_pred cccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc
Q psy9949 273 PFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP 352 (383)
Q Consensus 273 ~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~ 352 (383)
++++ ++|+++.++..... ...++... . ..++..+. +......+.+.+++++++++++.+
T Consensus 294 ~~l~--~~G~iv~~g~~~~~------------~~~~~~~~-~-----~~~~~~i~-~~~~~~~~~~~~~~~~l~~g~l~~ 352 (386)
T cd08283 294 QAVR--KGGTVSIIGVYGGT------------VNKFPIGA-A-----MNKGLTLR-MGQTHVQRYLPRLLELIESGELDP 352 (386)
T ss_pred HHhc--cCCEEEEEcCCCCC------------cCccCHHH-H-----HhCCcEEE-eccCCchHHHHHHHHHHHcCCCCh
Confidence 8899 99999998642110 00001100 0 11111111 111223678899999999999876
Q ss_pred --ccceeecCCCHHHHHHHHhcCC-CCCeEEEe
Q psy9949 353 --VIDSKYNFCELPTAFEKVQQGH-LRGKIILN 382 (383)
Q Consensus 353 --~~~~~~~l~~~~~a~~~l~~~~-~~gkvvl~ 382 (383)
++.+.|+++++++|++.+.+++ ..+|+||+
T Consensus 353 ~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~ 385 (386)
T cd08283 353 SFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLK 385 (386)
T ss_pred hHceEEEecHHHHHHHHHHHHhCCCCeEEEEec
Confidence 3568899999999999998877 45899986
No 80
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=2.2e-34 Score=273.90 Aligned_cols=316 Identities=19% Similarity=0.222 Sum_probs=236.3
Q ss_pred eeeEEEeecCCCceeEeeccccCCCC-CCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPIL-KSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR 105 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~ 105 (383)
||++++.+++ .++++ ++|.|++ +++||+|||.+++||++|++...|.. . ..+|.++||
T Consensus 1 m~~~~~~~~~---~~~~~-~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~----------------~-~~~p~~~g~ 59 (375)
T cd08282 1 MKAVVYGGPG---NVAVE-DVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRT----------------G-AEPGLVLGH 59 (375)
T ss_pred CceEEEecCC---ceeEE-eCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCC----------------C-CCCCceecc
Confidence 6788887654 47888 7899986 79999999999999999999988751 1 345789999
Q ss_pred ceeEEEEecCCCCCCCCCCCEEEEe-------ec---------------------------CCCCCCceEEEeecCc--c
Q psy9949 106 DFCGKIVAKGPRVTDLNIDDVVYGV-------IQ---------------------------PHKQGSFSKLILADSA--L 149 (383)
Q Consensus 106 e~~G~Vv~vG~~v~~~~~Gd~V~~~-------~~---------------------------~~~~g~~a~~~~v~~~--~ 149 (383)
|++|+|+++|++++.+++||+|++. +. ...+|+|++|++++.+ .
T Consensus 60 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~ 139 (375)
T cd08282 60 EAMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFN 139 (375)
T ss_pred ccEEEEEEeCCCCCcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCc
Confidence 9999999999999999999999862 10 0124899999999976 8
Q ss_pred cccCCCCCCHH---HHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-ch
Q psy9949 150 VHKKPSNISDE---EAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DA 224 (383)
Q Consensus 150 ~~~ip~~~~~~---~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~ 224 (383)
++++|++++++ +++.+..++.|||+++ ..+++ +++++|+|.| +|++|++++++|+++|+ +|++++++ ++
T Consensus 140 ~~~lP~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~----~~g~~vlI~g-~g~vg~~~~~~a~~~G~~~vi~~~~~~~~ 213 (375)
T cd08282 140 LLKLPDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGV----QPGDTVAVFG-AGPVGLMAAYSAILRGASRVYVVDHVPER 213 (375)
T ss_pred EEECCCCCChhhhhheeeecchHHHHHHHH-HhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHH
Confidence 99999999998 4677788899999999 57888 8999999976 79999999999999998 79887754 46
Q ss_pred HHHHHhcCCCeeeeCCChHHHHHHhcC--CCccEEEEcCCCCc------------ccccccccccccCCCceEEEecCCC
Q psy9949 225 KDLVTSLNPNLVIDYNEPEAMHSIAGA--GPYDVILDAAGIPL------------DQINSYLPFLKTGKFSKFVTLRSPF 290 (383)
Q Consensus 225 ~~~~~~lg~~~v~~~~~~~~~~~i~~~--~g~d~v~d~~g~~~------------~~~~~~~~~l~~~~~G~~v~~~~~~ 290 (383)
.++++++|++ .+++++.++.+.+.+. +++|+++||+|+.. .... +++++ ++|+++.++...
T Consensus 214 ~~~~~~~g~~-~v~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~--~~~l~--~~g~~~~~g~~~ 288 (375)
T cd08282 214 LDLAESIGAI-PIDFSDGDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQL--IRVTR--PGGGIGIVGVYV 288 (375)
T ss_pred HHHHHHcCCe-EeccCcccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHH--HHHhh--cCcEEEEEeccC
Confidence 6788899984 5677666666665543 47999999999864 2333 78899 999998776432
Q ss_pred ccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHH
Q psy9949 291 LKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFE 368 (383)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~ 368 (383)
....+............+++.. + ..++... .+......+.+.+++++++++++++ ++.+.|+++++++|++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~ 361 (375)
T cd08282 289 AEDPGAGDAAAKQGELSFDFGL--L----WAKGLSF-GTGQAPVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYA 361 (375)
T ss_pred CcccccccccccCccccccHHH--H----HhcCcEE-EEecCCchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHH
Confidence 1111100000000001111111 1 1111111 1222234678899999999999986 3789999999999999
Q ss_pred HHhcCCCCCeEEEe
Q psy9949 369 KVQQGHLRGKIILN 382 (383)
Q Consensus 369 ~l~~~~~~gkvvl~ 382 (383)
.+.+++ .+|+|++
T Consensus 362 ~~~~~~-~~kvvv~ 374 (375)
T cd08282 362 RFDKRL-ETKVVIK 374 (375)
T ss_pred HHhcCC-ceEEEeC
Confidence 999888 8899986
No 81
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=1.6e-34 Score=273.86 Aligned_cols=309 Identities=19% Similarity=0.226 Sum_probs=240.9
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
|||+++.+++++ ++++ +++.|++++++|+||+.++++|++|+.+..|. ....+|.++|+|
T Consensus 1 m~a~~~~~~~~~--~~~~-~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~-----------------~~~~~~~~~g~e 60 (363)
T cd08279 1 MRAAVLHEVGKP--LEIE-EVELDDPGPGEVLVRIAAAGLCHSDLHVVTGD-----------------LPAPLPAVLGHE 60 (363)
T ss_pred CeEEEEecCCCC--ceEE-EeeCCCCCCCeEEEEEEEeecCcHHHHHhcCC-----------------CCCCCCcccccc
Confidence 789999988765 7787 78999999999999999999999999988775 113456789999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeec--------------------------------------------CCCCCCceEE
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQ--------------------------------------------PHKQGSFSKL 142 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~--------------------------------------------~~~~g~~a~~ 142 (383)
++|+|+++|++++.+++||+|++... ....|+|++|
T Consensus 61 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 140 (363)
T cd08279 61 GAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEY 140 (363)
T ss_pred ceEEEEEeCCCccccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceee
Confidence 99999999999999999999998310 0125899999
Q ss_pred EeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEec
Q psy9949 143 ILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTCS 221 (383)
Q Consensus 143 ~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~ 221 (383)
+.++.+.++++|+++++++++.++++++|||+++....++ +++++|+|+| +|++|++++++|+..|++ |+++.+
T Consensus 141 ~~~~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~~~~~~~~----~~g~~vLI~g-~g~vG~a~i~lak~~G~~~Vi~~~~ 215 (363)
T cd08279 141 TVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARV----RPGDTVAVIG-CGGVGLNAIQGARIAGASRIIAVDP 215 (363)
T ss_pred EEeccccEEECCCCCChHHeehhcchhHHHHHHHHhccCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEEcC
Confidence 9999999999999999999999999999999998877888 8999999996 799999999999999995 888875
Q ss_pred C-chHHHHHhcCCCeeeeCCChHHHHHHhc---CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCC
Q psy9949 222 G-DAKDLVTSLNPNLVIDYNEPEAMHSIAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSL 297 (383)
Q Consensus 222 ~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~ 297 (383)
+ ++.++++++|++++++++..++..++.. ..++|+++|++++....... +++++ ++|+++.++.....
T Consensus 216 ~~~~~~~~~~~g~~~vv~~~~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~-~~~l~--~~G~~v~~g~~~~~----- 287 (363)
T cd08279 216 VPEKLELARRFGATHTVNASEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQA-LAMTR--KGGTAVVVGMGPPG----- 287 (363)
T ss_pred CHHHHHHHHHhCCeEEeCCCCccHHHHHHHHcCCCCCCEEEEcCCChHHHHHH-HHHhh--cCCeEEEEecCCCC-----
Confidence 5 4567778899999998887677666654 35799999999965443332 88999 99999998542110
Q ss_pred CCchhhhhhHHHHhhhhhccccccCCccEEEEEE--cCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcC
Q psy9949 298 GLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFF--MPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQG 373 (383)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~ 373 (383)
. ...+....+ ...+..+....+ ....+.+++++++++++.+.+ .+.++|+++++++|++.+.++
T Consensus 288 ---~-----~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~ 355 (363)
T cd08279 288 ---E-----TVSLPALEL----FLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAG 355 (363)
T ss_pred ---c-----ccccCHHHH----hhcCcEEEEEEecCcCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcC
Confidence 0 001111111 011111111111 123678999999999999876 367889999999999999988
Q ss_pred CCCCeEE
Q psy9949 374 HLRGKII 380 (383)
Q Consensus 374 ~~~gkvv 380 (383)
+..+.++
T Consensus 356 ~~~~~~~ 362 (363)
T cd08279 356 ENARGVI 362 (363)
T ss_pred CceeEEe
Confidence 8764443
No 82
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=7.2e-34 Score=266.47 Aligned_cols=313 Identities=27% Similarity=0.362 Sum_probs=249.7
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
|||+++...+.++.+.++ +.+.|.++++|++|++.++++|++|+....|..+ .....|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~---------------~~~~~~~~~g~e 64 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLV-EEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYP---------------PPVKDPLIPLSD 64 (336)
T ss_pred CeEEEEeccCCCcceEEE-eccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCC---------------CCCCCCcccccc
Confidence 789999987766778888 7888889999999999999999999998877511 122367889999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeec------------------CCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHH
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQ------------------PHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYT 168 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~ 168 (383)
++|+|+++|+++.++++||+|++... ...+|+|++|+.++.+.++++|+++++.+++.+++.
T Consensus 65 ~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~ 144 (336)
T cd08276 65 GAGEVVAVGEGVTRFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCA 144 (336)
T ss_pred eeEEEEEeCCCCcCCCCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHH
Confidence 99999999999999999999998641 112588999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCC-hHHHH
Q psy9949 169 GLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNE-PEAMH 246 (383)
Q Consensus 169 ~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~-~~~~~ 246 (383)
+++||+++...+.+ +++++|+|+| +|++|++++++|++.|++|++++++ ++.+.+.++|.+.++++.. .++.+
T Consensus 145 ~~~a~~~l~~~~~~----~~g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 219 (336)
T cd08276 145 GLTAWNALFGLGPL----KPGDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAKALGADHVINYRTTPDWGE 219 (336)
T ss_pred HHHHHHHHHhhcCC----CCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEcCCcccCHHH
Confidence 99999999877888 8999999996 8999999999999999999999865 4567777789998888776 56666
Q ss_pred HHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCC
Q psy9949 247 SIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKT 323 (383)
Q Consensus 247 ~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (383)
.+... .++|+++|+++....... +++++ ++|+++.++....... ......+ ..++
T Consensus 220 ~~~~~~~~~~~d~~i~~~~~~~~~~~--~~~l~--~~G~~v~~g~~~~~~~---------~~~~~~~---------~~~~ 277 (336)
T cd08276 220 EVLKLTGGRGVDHVVEVGGPGTLAQS--IKAVA--PGGVISLIGFLSGFEA---------PVLLLPL---------LTKG 277 (336)
T ss_pred HHHHHcCCCCCcEEEECCChHHHHHH--HHhhc--CCCEEEEEccCCCCcc---------CcCHHHH---------hhcc
Confidence 65532 479999999987655555 89999 9999999864211100 0001111 1122
Q ss_pred ccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 324 NTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
..+. +......+.+.+++++++++.+.+...+.+++++++++++.+.+++..||+++++
T Consensus 278 ~~~~-~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 336 (336)
T cd08276 278 ATLR-GIAVGSRAQFEAMNRAIEAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIRV 336 (336)
T ss_pred eEEE-EEecCcHHHHHHHHHHHHcCCcccccCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 2221 1222346789999999999988777778999999999999999888889999874
No 83
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1e-33 Score=264.99 Aligned_cols=326 Identities=22% Similarity=0.265 Sum_probs=245.9
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
.|++.+.+.+.+..++++ +.+.|.|.+++|+|++.++++|++|+.+..|..+ ....+|.++|||
T Consensus 1 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~---------------~~~~~~~~~g~e 64 (331)
T cd08273 1 NREVVVTRRGGPEVLKVV-EADLPEPAAGEVVVKVEASGVSFADVQMRRGLYP---------------DQPPLPFTPGYD 64 (331)
T ss_pred CeeEEEccCCCcccEEEe-ccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCC---------------CCCCCCcccccc
Confidence 478999988888889999 7899999999999999999999999998877511 112467899999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccC
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVY 186 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~ 186 (383)
++|+|+++|++++.|++||+|+++.. .|+|++|+.++.+.++++|+++++++++.+++++.+||+++.....+
T Consensus 65 ~~G~v~~vG~~v~~~~~Gd~V~~~~~---~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~---- 137 (331)
T cd08273 65 LVGRVDALGSGVTGFEVGDRVAALTR---VGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKV---- 137 (331)
T ss_pred eEEEEEEeCCCCccCCCCCEEEEeCC---CcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCC----
Confidence 99999999999999999999999863 48999999999999999999999999999999999999999877788
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD 266 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~ 266 (383)
+++++|+|+|++|++|++++++|+..|++|++++++++.++++++|++. +++...++.......+++|+++|++|+...
T Consensus 138 ~~g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~ 216 (331)
T cd08273 138 LTGQRVLIHGASGGVGQALLELALLAGAEVYGTASERNHAALRELGATP-IDYRTKDWLPAMLTPGGVDVVFDGVGGESY 216 (331)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCHHHHHHHHHcCCeE-EcCCCcchhhhhccCCCceEEEECCchHHH
Confidence 8999999999889999999999999999999998844567778888753 455544444331112579999999998875
Q ss_pred cccccccccccCCCceEEEecCCCccCCCCCCCchh-hhhhHHH-HhhhhhccccccCCccEEEEEEc--CCHHHHHHHH
Q psy9949 267 QINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPG-LVKNAFD-LLKSNFESGELCKTNTIRWGFFM--PIPYAVKEIN 342 (383)
Q Consensus 267 ~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 342 (383)
... +++++ ++|+++.++...........+... ....... +....+.+.....+... ..... ...+.+.+++
T Consensus 217 ~~~--~~~l~--~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~ 291 (331)
T cd08273 217 EES--YAALA--PGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWR-DRAEDPKLFRQDLTELL 291 (331)
T ss_pred HHH--HHHhc--CCCEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeech-hcccCHHHHHHHHHHHH
Confidence 444 89999 999999987543221110000000 0000000 00000000000000000 00000 1246788999
Q ss_pred HHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEE
Q psy9949 343 KFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381 (383)
Q Consensus 343 ~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl 381 (383)
++++++.+.+.+.+++++++++++++.+.+++..||+|+
T Consensus 292 ~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 292 DLLAKGKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred HHHHCCCccCCcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 999999998878889999999999999998888899886
No 84
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=5.2e-34 Score=268.44 Aligned_cols=307 Identities=25% Similarity=0.323 Sum_probs=238.8
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
||++.+++++ .+.++ +.+.|++.+++|+||+.++++|+.|+.+..|.. .....|.++|+|
T Consensus 1 ~~~~~~~~~~---~~~~~-~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~----------------~~~~~~~~~g~~ 60 (343)
T cd08235 1 MKAAVLHGPN---DVRLE-EVPVPEPGPGEVLVKVRACGICGTDVKKIRGGH----------------TDLKPPRILGHE 60 (343)
T ss_pred CeEEEEecCC---ceEEE-EccCCCCCCCeEEEEEEEeeeccccHHHHcCCC----------------ccCCCCcccccc
Confidence 6899998765 37788 789999999999999999999999999887751 113446789999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeec------------------------CCCCCCceEEEeecCcc-----cccCCCCC
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQ------------------------PHKQGSFSKLILADSAL-----VHKKPSNI 157 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~------------------------~~~~g~~a~~~~v~~~~-----~~~ip~~~ 157 (383)
++|+|+++|++++.+++||+|+++.. ....|+|++|+.++.+. ++++|+++
T Consensus 61 ~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~ 140 (343)
T cd08235 61 IAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNV 140 (343)
T ss_pred eEEEEEeeCCCCCCCCCCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCC
Confidence 99999999999999999999998621 11359999999999998 99999999
Q ss_pred CHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecC-chHHHHHhcCCCe
Q psy9949 158 SDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTCSG-DAKDLVTSLNPNL 235 (383)
Q Consensus 158 ~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~~-~~~~~~~~lg~~~ 235 (383)
++.+++.+ ..+.+||+++. ..++ +++++|+|+| +|++|++++++|+..|++ |+++.++ ++.+.+.++|.+.
T Consensus 141 ~~~~aa~~-~~~~~a~~~l~-~~~~----~~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~ 213 (343)
T cd08235 141 SFEEAALV-EPLACCINAQR-KAGI----KPGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADY 213 (343)
T ss_pred CHHHHHhh-hHHHHHHHHHH-hcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcE
Confidence 99999876 78889999996 4477 8999999997 799999999999999998 8887744 5567778899999
Q ss_pred eeeCCChHHHHHHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhh
Q psy9949 236 VIDYNEPEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLK 312 (383)
Q Consensus 236 v~~~~~~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (383)
++++++.++.+.+.+. .++|++||++++....... +++++ ++|+++.++........ .......
T Consensus 214 ~~~~~~~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~-~~~l~--~~g~~v~~~~~~~~~~~------~~~~~~~---- 280 (343)
T cd08235 214 TIDAAEEDLVEKVRELTDGRGADVVIVATGSPEAQAQA-LELVR--KGGRILFFGGLPKGSTV------NIDPNLI---- 280 (343)
T ss_pred EecCCccCHHHHHHHHhCCcCCCEEEECCCChHHHHHH-HHHhh--cCCEEEEEeccCCCCCc------ccCHHHH----
Confidence 9988887777766542 4699999999976433332 88999 99999998642111000 0000111
Q ss_pred hhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949 313 SNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQGHLRGKIILN 382 (383)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~ 382 (383)
..++..+ .+......+.++.++++++++.+.+ .+..+|+++++.++++.+.+++ .||+|+.
T Consensus 281 -------~~~~~~l-~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 281 -------HYREITI-TGSYAASPEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred -------hhCceEE-EEEecCChhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence 1111111 1222334678899999999999863 4567899999999999999998 8999874
No 85
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=4.4e-34 Score=266.78 Aligned_cols=315 Identities=20% Similarity=0.224 Sum_probs=236.4
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
|||+++..+|+++.++++ +.|.|+++++||+||+.++++|++|+.+..|..+ ....+|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~---------------~~~~~~~~~g~e 64 (324)
T cd08288 1 FKALVLEKDDGGTSAELR-ELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGG---------------IVRTFPLVPGID 64 (324)
T ss_pred CeeEEEeccCCCcceEEE-ECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCcc---------------ccCCCCCccccc
Confidence 789999998887778899 8999999999999999999999999998877510 112357789999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeec---CCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHH--hhh
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQ---PHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQI--TAA 181 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~---~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~--~~~ 181 (383)
++|+|++ ++++++++||+|+++.. ...+|+|++|++++.+.++++|+++++++++.+++++++|++++.. ...
T Consensus 65 ~~G~V~~--~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~ 142 (324)
T cd08288 65 LAGTVVE--SSSPRFKPGDRVVLTGWGVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHG 142 (324)
T ss_pred eEEEEEe--CCCCCCCCCCEEEECCccCCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcC
Confidence 9999999 77778999999998631 0125899999999999999999999999999999999999877641 123
Q ss_pred cCccCC-CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-CchHHHHHhcCCCeeeeCCChHHHHHHhc--CCCccEE
Q psy9949 182 LGLVYP-RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS-GDAKDLVTSLNPNLVIDYNEPEAMHSIAG--AGPYDVI 257 (383)
Q Consensus 182 ~~~~~~-~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~i~~--~~g~d~v 257 (383)
. . ++++|+|+|++|++|++++++|+.+|++|+++++ +++.+.++++|++.++++++... .+.. .+++|.+
T Consensus 143 ~----~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~ 216 (324)
T cd08288 143 V----TPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLRSLGASEIIDRAELSE--PGRPLQKERWAGA 216 (324)
T ss_pred c----CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCEEEEcchhhH--hhhhhccCcccEE
Confidence 3 4 5789999998899999999999999999999884 45678888999999998876433 3322 2368899
Q ss_pred EEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHH
Q psy9949 258 LDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYA 337 (383)
Q Consensus 258 ~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (383)
+|++++...... +.+++ .+|+++.+|..... ... +++.. .+.+...+.+............+.
T Consensus 217 ~d~~~~~~~~~~--~~~~~--~~g~~~~~G~~~~~-----~~~-------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 279 (324)
T cd08288 217 VDTVGGHTLANV--LAQTR--YGGAVAACGLAGGA-----DLP-------TTVMP-FILRGVTLLGIDSVMAPIERRRAA 279 (324)
T ss_pred EECCcHHHHHHH--HHHhc--CCCEEEEEEecCCC-----CCC-------cchhh-hhccccEEEEEEeecccchhhHHH
Confidence 999997443333 66777 88999988653110 000 01100 001122222211100000112456
Q ss_pred HHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 338 VKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 338 ~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
++.+.+++.++.+.+. .+.++++++++|++.+.+++..||+++++
T Consensus 280 ~~~~~~~~~~~~~~~i-~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 280 WARLARDLDPALLEAL-TREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred HHHHHHHHhcCCcccc-ceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 7778888888888764 67899999999999999999999999875
No 86
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=6.7e-34 Score=265.35 Aligned_cols=319 Identities=28% Similarity=0.408 Sum_probs=249.7
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
||++++.++++.+.+.++ +.+.|++.+++|+||+.++++|++|+....+.. ....+|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~----------------~~~~~~~~~g~e 63 (325)
T cd08271 1 MKAWVLPKPGAALQLTLE-EIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGP----------------PAWSYPHVPGVD 63 (325)
T ss_pred CeeEEEccCCCcceeEEe-ccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCC----------------CCCCCCcccccc
Confidence 789999988854468888 899999999999999999999999998876641 112236789999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccC
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVY 186 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~ 186 (383)
++|+|+.+|++++++++||+|+++......|+|++|+.++.+.++++|++++..+++.+.+.+.+|++++.+.+.+
T Consensus 64 ~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~---- 139 (325)
T cd08271 64 GAGVVVAVGAKVTGWKVGDRVAYHASLARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRI---- 139 (325)
T ss_pred eEEEEEEeCCCCCcCCCCCEEEeccCCCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCC----
Confidence 9999999999999999999999985333359999999999999999999999999999999999999999878888
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcC---CCccEEEEcCCC
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVILDAAGI 263 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v~d~~g~ 263 (383)
+++++++|+|++|++|++++++++..|++|+++.++++.+.+.++|++.+++....++.+.+... .++|++++++++
T Consensus 140 ~~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~ 219 (325)
T cd08271 140 EAGRTILITGGAGGVGSFAVQLAKRAGLRVITTCSKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGG 219 (325)
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEEcHHHHHHHHHcCCcEEecCCCccHHHHHHHHcCCCCCcEEEECCCc
Confidence 89999999998899999999999999999888876566677788999888887776666666542 479999999998
Q ss_pred CcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEE---cCCHHHHHH
Q psy9949 264 PLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFF---MPIPYAVKE 340 (383)
Q Consensus 264 ~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 340 (383)
...... +++++ ++|+++.++...... .......+..+. ...+..... .... ....+.+.+
T Consensus 220 ~~~~~~--~~~l~--~~G~~v~~~~~~~~~------~~~~~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~~~ 282 (325)
T cd08271 220 ETAAAL--APTLA--FNGHLVCIQGRPDAS------PDPPFTRALSVH------EVALGAAHD-HGDPAAWQDLRYAGEE 282 (325)
T ss_pred HhHHHH--HHhhc--cCCEEEEEcCCCCCc------chhHHhhcceEE------EEEeccccc-ccchhhHHHHHHHHHH
Confidence 765554 89999 999999885321100 000000000110 111111100 0000 112456788
Q ss_pred HHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 341 INKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 341 ~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
++++++++.+.+...+.|+++++.++++.+.++...+|+++++
T Consensus 283 ~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 283 LLELLAAGKLEPLVIEVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred HHHHHHCCCeeeccceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 9999999998877778899999999999999888889999874
No 87
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=8.5e-34 Score=265.46 Aligned_cols=301 Identities=24% Similarity=0.317 Sum_probs=236.9
Q ss_pred eeeEEEeecCCC--ceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCcccc
Q psy9949 27 TAAWQISSYGGA--DELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLG 104 (383)
Q Consensus 27 ~~a~~~~~~g~~--~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G 104 (383)
||++++.+++.+ ..+.++ +.+.|.++++||+||+.++++|++|+....|. .+...+|.++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~----------------~~~~~~~~~~g 63 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLT-EVPVPEPGPGEVLIKVEACGVCRTDLHIVEGD----------------LPPPKLPLIPG 63 (329)
T ss_pred CeEEEEecCCCCCCCCceEE-eccCCCCCCCEEEEEEEEEeccHHHHHHHhCC----------------CCCCCCCcccc
Confidence 789999888753 347777 67888899999999999999999999988775 12234578999
Q ss_pred CceeEEEEecCCCCCCCCCCCEEEEe-----------e--------------cCCCCCCceEEEeecCcccccCCCCCCH
Q psy9949 105 RDFCGKIVAKGPRVTDLNIDDVVYGV-----------I--------------QPHKQGSFSKLILADSALVHKKPSNISD 159 (383)
Q Consensus 105 ~e~~G~Vv~vG~~v~~~~~Gd~V~~~-----------~--------------~~~~~g~~a~~~~v~~~~~~~ip~~~~~ 159 (383)
||++|+|+++|+++.++++||+|++. + +...+|+|++|+.++.+.++++|+++++
T Consensus 64 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~ 143 (329)
T cd08298 64 HEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDD 143 (329)
T ss_pred ccccEEEEEECCCCCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCH
Confidence 99999999999999999999999762 1 0112589999999999999999999999
Q ss_pred HHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeee
Q psy9949 160 EEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVID 238 (383)
Q Consensus 160 ~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~ 238 (383)
.+++.++++++|||+++ ..+++ +++++|+|+| +|++|++++++|+..|++|++++++ ++.+.++++|++.+++
T Consensus 144 ~~~~~~~~~~~ta~~~~-~~~~~----~~~~~vlV~g-~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~ 217 (329)
T cd08298 144 EEAAPLLCAGIIGYRAL-KLAGL----KPGQRLGLYG-FGASAHLALQIARYQGAEVFAFTRSGEHQELARELGADWAGD 217 (329)
T ss_pred HHhhHhhhhhHHHHHHH-HhhCC----CCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHHhCCcEEec
Confidence 99999999999999999 68888 9999999997 8999999999999999999999855 5667888899988776
Q ss_pred CCChHHHHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccc
Q psy9949 239 YNEPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESG 318 (383)
Q Consensus 239 ~~~~~~~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (383)
.+.. ...++|+++++++........ +++++ ++|+++.++... . ....+++..
T Consensus 218 ~~~~-------~~~~vD~vi~~~~~~~~~~~~-~~~l~--~~G~~v~~g~~~-----------~-~~~~~~~~~------ 269 (329)
T cd08298 218 SDDL-------PPEPLDAAIIFAPVGALVPAA-LRAVK--KGGRVVLAGIHM-----------S-DIPAFDYEL------ 269 (329)
T ss_pred cCcc-------CCCcccEEEEcCCcHHHHHHH-HHHhh--cCCEEEEEcCCC-----------C-CCCccchhh------
Confidence 6542 124799999987655443333 89999 999999875210 0 000111111
Q ss_pred cccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEE
Q psy9949 319 ELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381 (383)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl 381 (383)
......+ .+......+.+.+++++++++.+++. .++|+++++++|++.+.+++..||+|+
T Consensus 270 -~~~~~~i-~~~~~~~~~~~~~~~~l~~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 270 -LWGEKTI-RSVANLTRQDGEEFLKLAAEIPIKPE-VETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred -hhCceEE-EEecCCCHHHHHHHHHHHHcCCCCce-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 1111111 12223457788999999999998774 578999999999999999999999874
No 88
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=2.5e-33 Score=264.74 Aligned_cols=331 Identities=27% Similarity=0.378 Sum_probs=236.8
Q ss_pred eeeEEEeecCCCceeEeeccccCCC-CCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPI-LKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR 105 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~-~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~ 105 (383)
.|++++.+++++..++.. +.|.|+ +.+++|+||+.++++|++|+....+... .....|.++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~---------------~~~~~~~~~g~ 64 (352)
T cd08247 1 YKALTFKNNTSPLTITTI-KLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTF---------------HFKVKEKGLGR 64 (352)
T ss_pred CceEEEecCCCcceeecc-CCCCCCCCCCCeEEEEEEEEecChHhHHHhccccc---------------ccccCCCccCc
Confidence 368899988888665555 455553 4899999999999999999987654310 11123678999
Q ss_pred ceeEEEEecCCCCC-CCCCCCEEEEeecCC--CCCCceEEEeecCc----ccccCCCCCCHHHHHhhhHHHHHHHHHHHH
Q psy9949 106 DFCGKIVAKGPRVT-DLNIDDVVYGVIQPH--KQGSFSKLILADSA----LVHKKPSNISDEEAAGVLYTGLTAWSALQI 178 (383)
Q Consensus 106 e~~G~Vv~vG~~v~-~~~~Gd~V~~~~~~~--~~g~~a~~~~v~~~----~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~ 178 (383)
|++|+|+++|++++ .|++||+|+++.... ..|+|++|++++.. .++++|+++++++++.++.++.|||+++.+
T Consensus 65 e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~ 144 (352)
T cd08247 65 DYSGVIVKVGSNVASEWKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILED 144 (352)
T ss_pred eeEEEEEEeCcccccCCCCCCEEEEeecCCCCCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHH
Confidence 99999999999998 899999999875211 24899999999987 789999999999999999999999999987
Q ss_pred hh-hcCccCCCCCEEEEEcCCchHHHHHHHHHHHC-CC-EEEEEecCchHHHHHhcCCCeeeeCCChH---HHHHHh-c-
Q psy9949 179 TA-ALGLVYPRDKRVLVLGASGGVGTMAVQLLKAW-DI-EVVTTCSGDAKDLVTSLNPNLVIDYNEPE---AMHSIA-G- 250 (383)
Q Consensus 179 ~~-~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~-G~-~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~---~~~~i~-~- 250 (383)
.. ++ +++++|+|+|++|++|++++++|+.+ |. +++++.+.++.+.++++|++.++++++.+ +..++. .
T Consensus 145 ~~~~~----~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~ 220 (352)
T cd08247 145 LGQKL----GPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCSSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENV 220 (352)
T ss_pred hhhcc----CCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEeChhHHHHHHHhCCCEEEecCCCcccchHHHHHHhh
Confidence 76 78 89999999999999999999999987 55 67777766666677889999888876654 333332 2
Q ss_pred --CCCccEEEEcCCCCcccccc--cccccccCCCceEEEecCCCccCCCCCCCchhhh-hhHHHHhhhhhccccccCCcc
Q psy9949 251 --AGPYDVILDAAGIPLDQINS--YLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLV-KNAFDLLKSNFESGELCKTNT 325 (383)
Q Consensus 251 --~~g~d~v~d~~g~~~~~~~~--~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 325 (383)
..++|++|||+|+....... .+++.. ++|+++.+++....... ....... ....... .+.+...+....
T Consensus 221 ~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~--~~G~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 294 (352)
T cd08247 221 KGQGKFDLILDCVGGYDLFPHINSILKPKS--KNGHYVTIVGDYKANYK--KDTFNSWDNPSANAR--KLFGSLGLWSYN 294 (352)
T ss_pred cCCCCceEEEECCCCHHHHHHHHHHhCccC--CCCEEEEEeCCCccccc--chhhhhccccchhhh--hhhhhhcCCCcc
Confidence 35799999999984332111 033334 78999987422100000 0000000 0000000 000011112222
Q ss_pred EEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 326 IRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
+......+..+.+.++++++.++.+++.+.+.++++++++|++.+.+++..||+++++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 352 (352)
T cd08247 295 YQFFLLDPNADWIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV 352 (352)
T ss_pred eEEEEecCCHHHHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence 2211122234678999999999999887888999999999999999999899999874
No 89
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.9e-33 Score=262.17 Aligned_cols=315 Identities=29% Similarity=0.431 Sum_probs=248.8
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
||++++.+++.++.+.++ +.+.|++.+++|+|++.++++|++|+....+... .....|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~---------------~~~~~~~~~g~e 64 (326)
T cd08272 1 MKALVLESFGGPEVFELR-EVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAA---------------ARPPLPAILGCD 64 (326)
T ss_pred CeEEEEccCCCchheEEe-ecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCC---------------CCCCCCcccccc
Confidence 789999998888778888 7888889999999999999999999988776511 112347789999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeecC--CCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCc
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQP--HKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGL 184 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~--~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~ 184 (383)
++|+|+++|+++.+|++||+|+++... ...|+|++|+.++.++++++|+++++.+++.++..+.+||+++.+..++
T Consensus 65 ~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~-- 142 (326)
T cd08272 65 VAGVVEAVGEGVTRFRVGDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAV-- 142 (326)
T ss_pred eeEEEEEeCCCCCCCCCCCEEEEccCCcCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCC--
Confidence 999999999999999999999987521 1148999999999999999999999999999999999999998878888
Q ss_pred cCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcC---CCccEEEEcC
Q psy9949 185 VYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVILDAA 261 (383)
Q Consensus 185 ~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v~d~~ 261 (383)
+++++++|+|++|++|++++++|+..|++|++++++++.+.++++|.+.+++.... +...+... .++|.++|++
T Consensus 143 --~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~ 219 (326)
T cd08272 143 --QAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASSEKAAFARSLGADPIIYYRET-VVEYVAEHTGGRGFDVVFDTV 219 (326)
T ss_pred --CCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEechHHHHHHHHcCCCEEEecchh-HHHHHHHhcCCCCCcEEEECC
Confidence 89999999999999999999999999999999986666677888999888887766 66666543 4799999999
Q ss_pred CCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEE----E-EEEcCCHH
Q psy9949 262 GIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIR----W-GFFMPIPY 336 (383)
Q Consensus 262 g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~ 336 (383)
|+...... +++++ ++|+++.++... . . ... ..... ...+.+.... . .......+
T Consensus 220 ~~~~~~~~--~~~l~--~~g~~v~~~~~~--~---~----~~~----~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 278 (326)
T cd08272 220 GGETLDAS--FEAVA--LYGRVVSILGGA--T---H----DLA----PLSFR----NATYSGVFTLLPLLTGEGRAHHGE 278 (326)
T ss_pred ChHHHHHH--HHHhc--cCCEEEEEecCC--c---c----chh----hHhhh----cceEEEEEcccccccccchhhHHH
Confidence 98654444 88999 999999985431 0 0 000 00001 1111110000 0 00001256
Q ss_pred HHHHHHHHHHcCCcccccc-eeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 337 AVKEINKFIERGQIKPVID-SKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 337 ~~~~~~~l~~~g~l~~~~~-~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
.+.+++++++++.+.+.++ +.|++++++++++.+.+++..+|+++++
T Consensus 279 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 279 ILREAARLVERGQLRPLLDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred HHHHHHHHHHCCCcccccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 7888999999999887655 8999999999999999888889999875
No 90
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=7.9e-34 Score=265.24 Aligned_cols=300 Identities=26% Similarity=0.362 Sum_probs=231.3
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
||++++..++ ++.++++ +.+.|+++++||+||+.++++|++|+....+. ....+|.++|||
T Consensus 1 ~~~~~~~~~~-~~~~~~~-~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-----------------~~~~~~~~~g~e 61 (325)
T cd08264 1 MKALVFEKSG-IENLKVE-DVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-----------------KVKPMPHIPGAE 61 (325)
T ss_pred CeeEEeccCC-CCceEEE-eccCCCCCCCeEEEEEEEEEechHHHHHHhCC-----------------CCCCCCeecccc
Confidence 6889888776 5668888 77888899999999999999999999887643 112346789999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeec------------------------CCCCCCceEEEeecCcccccCCCCCCHHHH
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQ------------------------PHKQGSFSKLILADSALVHKKPSNISDEEA 162 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~a 162 (383)
++|+|+++|++++.|++||+|+++.. ....|+|++|+.++.+.++++|++++++++
T Consensus 62 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~ 141 (325)
T cd08264 62 FAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELA 141 (325)
T ss_pred eeEEEEEECCCCCCCCCCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHh
Confidence 99999999999999999999987511 012589999999999999999999999999
Q ss_pred HhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCCh
Q psy9949 163 AGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEP 242 (383)
Q Consensus 163 a~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~ 242 (383)
+.+++++.+||+++. ..++ +++++|+|+|++|++|++++++|+.+|++|+++++ .+.++++|+++++++++
T Consensus 142 ~~~~~~~~~a~~~l~-~~~~----~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~---~~~~~~~g~~~~~~~~~- 212 (325)
T cd08264 142 ASLPVAALTAYHALK-TAGL----GPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR---KDWLKEFGADEVVDYDE- 212 (325)
T ss_pred hhhhhhhHHHHHHHH-hcCC----CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH---HHHHHHhCCCeeecchH-
Confidence 999999999999996 4777 99999999998899999999999999999988873 36667899988887654
Q ss_pred HHHHHHhcC-CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhcccccc
Q psy9949 243 EAMHSIAGA-GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELC 321 (383)
Q Consensus 243 ~~~~~i~~~-~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (383)
..+.+.+. .++|+++|++|+...... +++++ ++|+++.++..... . ..+++.. + ..
T Consensus 213 -~~~~l~~~~~~~d~vl~~~g~~~~~~~--~~~l~--~~g~~v~~g~~~~~-----~-------~~~~~~~--~----~~ 269 (325)
T cd08264 213 -VEEKVKEITKMADVVINSLGSSFWDLS--LSVLG--RGGRLVTFGTLTGG-----E-------VKLDLSD--L----YS 269 (325)
T ss_pred -HHHHHHHHhCCCCEEEECCCHHHHHHH--HHhhc--cCCEEEEEecCCCC-----C-------CccCHHH--H----hh
Confidence 22333221 679999999998544444 89999 99999998642100 0 0111111 0 11
Q ss_pred CCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEE
Q psy9949 322 KTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKII 380 (383)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvv 380 (383)
.+... .+.....++++.++++++...+ ..+.+.|+++++++|++.+.+++..||++
T Consensus 270 ~~~~~-~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kv~ 325 (325)
T cd08264 270 KQISI-IGSTGGTRKELLELVKIAKDLK--VKVWKTFKLEEAKEALKELFSKERDGRIL 325 (325)
T ss_pred cCcEE-EEccCCCHHHHHHHHHHHHcCC--ceeEEEEcHHHHHHHHHHHHcCCCccccC
Confidence 11111 1223345778999999996443 45678899999999999999888777753
No 91
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=8.4e-34 Score=266.35 Aligned_cols=311 Identities=25% Similarity=0.369 Sum_probs=245.7
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
||++++..++++. +.++ +.+.|.+++++|+|++.++++|+.|+....|..+ .....|.++|+|
T Consensus 1 ~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~---------------~~~~~~~~~g~~ 63 (338)
T cd08254 1 MKAWRFHKGSKGL-LVLE-EVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVP---------------TLTKLPLTLGHE 63 (338)
T ss_pred CeeEEEecCCCCc-eEEe-ccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCc---------------ccCCCCEecccc
Confidence 7899999888876 6777 7899999999999999999999999998877511 123457789999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEE------------------eec------CCCCCCceEEEeecCcccccCCCCCCHHHH
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYG------------------VIQ------PHKQGSFSKLILADSALVHKKPSNISDEEA 162 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~------------------~~~------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~a 162 (383)
++|+|+++|++++.+++||+|++ ++. ...+|+|++|+.++.+.++++|++++++++
T Consensus 64 ~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a 143 (338)
T cd08254 64 IAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQA 143 (338)
T ss_pred ccEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHh
Confidence 99999999999999999999986 210 112489999999999999999999999999
Q ss_pred HhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCC
Q psy9949 163 AGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNE 241 (383)
Q Consensus 163 a~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~ 241 (383)
+.++.++.|||+++....++ +++++|+|.| +|++|++++++|+..|++|++++++ ++.+.++++|.+.++++.+
T Consensus 144 ~~~~~~~~ta~~~l~~~~~~----~~~~~vli~g-~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~~~g~~~~~~~~~ 218 (338)
T cd08254 144 AVATDAVLTPYHAVVRAGEV----KPGETVLVIG-LGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAKELGADEVLNSLD 218 (338)
T ss_pred hhhcchHHHHHHHHHhccCC----CCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCCC
Confidence 99999999999999877778 8999999976 7999999999999999999999855 4567778899988887776
Q ss_pred hHHHHHHh--cCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhcccc
Q psy9949 242 PEAMHSIA--GAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGE 319 (383)
Q Consensus 242 ~~~~~~i~--~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (383)
..+.+.+. ...++|+++||+|........ +++++ ++|+++.++..... .. ++.. .+
T Consensus 219 ~~~~~~~~~~~~~~~D~vid~~g~~~~~~~~-~~~l~--~~G~~v~~g~~~~~----~~---------~~~~--~~---- 276 (338)
T cd08254 219 DSPKDKKAAGLGGGFDVIFDFVGTQPTFEDA-QKAVK--PGGRIVVVGLGRDK----LT---------VDLS--DL---- 276 (338)
T ss_pred cCHHHHHHHhcCCCceEEEECCCCHHHHHHH-HHHhh--cCCEEEEECCCCCC----Cc---------cCHH--HH----
Confidence 55555442 235799999999876443333 89999 99999998532100 00 0000 00
Q ss_pred ccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 320 LCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
..++.... +.+....+.+..++++++++.+.+. .+.+++++++++++.+.+++..||+|++.
T Consensus 277 ~~~~~~~~-~~~~~~~~~~~~~~~ll~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 277 IARELRII-GSFGGTPEDLPEVLDLIAKGKLDPQ-VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred hhCccEEE-EeccCCHHHHHHHHHHHHcCCCccc-ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 11111121 2223347889999999999998876 67899999999999999999999999863
No 92
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=7.1e-34 Score=269.50 Aligned_cols=310 Identities=18% Similarity=0.193 Sum_probs=235.3
Q ss_pred eeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCce
Q psy9949 28 AAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDF 107 (383)
Q Consensus 28 ~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~ 107 (383)
||+++.+.+++ +.++ +.+.|++++++|+||+.++++|++|++...|. ....+|.++|||+
T Consensus 2 ~a~~~~~~~~~--~~~~-~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~-----------------~~~~~~~i~g~e~ 61 (365)
T cd05279 2 KAAVLWEKGKP--LSIE-EIEVAPPKAGEVRIKVVATGVCHTDLHVIDGK-----------------LPTPLPVILGHEG 61 (365)
T ss_pred ceeEEecCCCC--cEEE-EeecCCCCCCeEEEEEEEeeecchhHHHhcCC-----------------CCCCCCcccccce
Confidence 57777776654 7788 89999999999999999999999999988775 1134578999999
Q ss_pred eEEEEecCCCCCCCCCCCEEEEeecC---------------------------------------------CCCCCceEE
Q psy9949 108 CGKIVAKGPRVTDLNIDDVVYGVIQP---------------------------------------------HKQGSFSKL 142 (383)
Q Consensus 108 ~G~Vv~vG~~v~~~~~Gd~V~~~~~~---------------------------------------------~~~g~~a~~ 142 (383)
+|+|+++|++++.+++||+|+++... ...|+|++|
T Consensus 62 ~G~V~~vG~~v~~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~ 141 (365)
T cd05279 62 AGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEY 141 (365)
T ss_pred eEEEEEeCCCcccCCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccce
Confidence 99999999999999999999876210 013789999
Q ss_pred EeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEe-
Q psy9949 143 ILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTC- 220 (383)
Q Consensus 143 ~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~- 220 (383)
+.++.+.++++|+++++++++.+.+++.+||+++...+++ +++++|+|+| +|++|++++++|+.+|++ |+++.
T Consensus 142 ~~v~~~~~~~lP~~~~~~~a~~~~~~~~ta~~al~~~~~~----~~g~~vlI~g-~g~vG~~a~~~a~~~G~~~v~~~~~ 216 (365)
T cd05279 142 TVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKV----TPGSTCAVFG-LGGVGLSVIMGCKAAGASRIIAVDI 216 (365)
T ss_pred EEecCCceEECCCCCCHHHhhHhccchhHHHHHHHhccCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeC
Confidence 9999999999999999999999999999999998878888 9999999997 799999999999999995 67766
Q ss_pred cCchHHHHHhcCCCeeeeCCCh--HHHHHHhc--CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCC
Q psy9949 221 SGDAKDLVTSLNPNLVIDYNEP--EAMHSIAG--AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDS 296 (383)
Q Consensus 221 ~~~~~~~~~~lg~~~v~~~~~~--~~~~~i~~--~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~ 296 (383)
++++.++++++|++.++++++. ++.+.+.+ ..++|+++|++|.......+ +++++. ++|+++.++.....
T Consensus 217 ~~~~~~~~~~~g~~~~v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~-~~~l~~-~~G~~v~~g~~~~~---- 290 (365)
T cd05279 217 NKDKFEKAKQLGATECINPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQA-LDATRL-GGGTSVVVGVPPSG---- 290 (365)
T ss_pred CHHHHHHHHHhCCCeecccccccchHHHHHHHHhCCCCcEEEECCCCHHHHHHH-HHHhcc-CCCEEEEEecCCCC----
Confidence 4456788899999988887765 56555543 25799999999864443332 556542 67899987532100
Q ss_pred CCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcCC
Q psy9949 297 LGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQGH 374 (383)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~~ 374 (383)
.+.......+ .. ...++|.. .......+.+.+++++++++.++. .+.++|+++++++||+.+.+++
T Consensus 291 ----~~~~~~~~~~-~~----~~~l~g~~---~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~ 358 (365)
T cd05279 291 ----TEATLDPNDL-LT----GRTIKGTV---FGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGE 358 (365)
T ss_pred ----CceeeCHHHH-hc----CCeEEEEe---ccCCchHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCC
Confidence 0000011111 11 11122210 001124678999999999998875 5788999999999999998776
Q ss_pred CCCeEEE
Q psy9949 375 LRGKIIL 381 (383)
Q Consensus 375 ~~gkvvl 381 (383)
.. |+++
T Consensus 359 ~~-~~~~ 364 (365)
T cd05279 359 SI-RTIL 364 (365)
T ss_pred ce-eeee
Confidence 64 6665
No 93
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=7.5e-34 Score=267.16 Aligned_cols=310 Identities=21% Similarity=0.281 Sum_probs=231.6
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
||++++.++++ .+++. +.|.|+|+++||+||++++++|++|+.++.+... . .....+|.++|||
T Consensus 1 ~~~~~~~~~~~--~~~~~-~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~------~-------~~~~~~p~~~g~e 64 (341)
T PRK05396 1 MKALVKLKAEP--GLWLT-DVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEW------A-------QKTIPVPMVVGHE 64 (341)
T ss_pred CceEEEecCCC--ceEEE-ECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCc------c-------cccCCCCccccee
Confidence 68999988664 47888 7899999999999999999999999987765300 0 0123467889999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeec------------------------CCCCCCceEEEeecCcccccCCCCCCHHHH
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQ------------------------PHKQGSFSKLILADSALVHKKPSNISDEEA 162 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~a 162 (383)
++|+|+++|++++++++||+|++... ...+|+|++|+.++.+.++++|++++++++
T Consensus 65 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~ 144 (341)
T PRK05396 65 FVGEVVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLA 144 (341)
T ss_pred eEEEEEEeCCCCCcCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHh
Confidence 99999999999999999999987511 013599999999999999999999999988
Q ss_pred HhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHHhcCCCeeeeCC
Q psy9949 163 AGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVTSLNPNLVIDYN 240 (383)
Q Consensus 163 a~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~~lg~~~v~~~~ 240 (383)
+.+ ..+.++++++.. .. .++++|+|.| +|++|++++++|+.+|+ +|+++.++ ++.++++++|++.+++++
T Consensus 145 ~~~-~~~~~~~~~~~~--~~----~~g~~vlV~~-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~ 216 (341)
T PRK05396 145 AIF-DPFGNAVHTALS--FD----LVGEDVLITG-AGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVA 216 (341)
T ss_pred Hhh-hHHHHHHHHHHc--CC----CCCCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCc
Confidence 855 455556665542 23 6899999987 79999999999999999 67777644 456788899999999888
Q ss_pred ChHHHHHHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhcc
Q psy9949 241 EPEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFES 317 (383)
Q Consensus 241 ~~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (383)
+.++.+.+.+. .++|++|||.|+....... +++++ ++|+++.++.... .. . +++.
T Consensus 217 ~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~-~~~l~--~~G~~v~~g~~~~------~~--~-----~~~~------ 274 (341)
T PRK05396 217 KEDLRDVMAELGMTEGFDVGLEMSGAPSAFRQM-LDNMN--HGGRIAMLGIPPG------DM--A-----IDWN------ 274 (341)
T ss_pred cccHHHHHHHhcCCCCCCEEEECCCCHHHHHHH-HHHHh--cCCEEEEEecCCC------CC--c-----ccHH------
Confidence 77777776542 4799999999876543332 88999 9999999864320 00 0 0110
Q ss_pred ccccCCccEEEEEEcCCHHHHHHHHHHHHcC-CcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 318 GELCKTNTIRWGFFMPIPYAVKEINKFIERG-QIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
....++..+.........+.+..++++++++ ++.+.+.+.++++++++|++.+.+++ .||++++.
T Consensus 275 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~ 340 (341)
T PRK05396 275 KVIFKGLTIKGIYGREMFETWYKMSALLQSGLDLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDW 340 (341)
T ss_pred HHhhcceEEEEEEccCccchHHHHHHHHHcCCChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEec
Confidence 0111111221111111234566788899988 45556778999999999999998877 79999863
No 94
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=2.7e-33 Score=262.90 Aligned_cols=314 Identities=28% Similarity=0.393 Sum_probs=248.9
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
||++++...+.+..+.++ +.+.|++.+++|+|++.++++|++|+.+..|..+ ....+|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~---------------~~~~~~~~~g~e 64 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYG-DLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPG---------------IKLPLPHILGSD 64 (342)
T ss_pred CeEEEEecCCCccceeEe-ecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCC---------------CCCCCCeecccc
Confidence 688888876666778888 6788889999999999999999999998877511 123457899999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeec------------------------CCCCCCceEEEeecCcccccCCCCCCHHHH
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQ------------------------PHKQGSFSKLILADSALVHKKPSNISDEEA 162 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~a 162 (383)
++|+|+++|+++++|++||+|+++.. ....|++++|+.++.+.++++|++++++++
T Consensus 65 ~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a 144 (342)
T cd08266 65 GAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEA 144 (342)
T ss_pred eEEEEEEeCCCCCCCCCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHH
Confidence 99999999999999999999987611 012588999999999999999999999999
Q ss_pred HhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCC
Q psy9949 163 AGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNE 241 (383)
Q Consensus 163 a~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~ 241 (383)
+.+++++.+||+++.+..++ +++++++|+|+++++|++++++++..|++|+.++++ ++.+.+.+++.+.+++..+
T Consensus 145 ~~~~~~~~~a~~~l~~~~~~----~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (342)
T cd08266 145 AAAPLTFLTAWHMLVTRARL----RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRK 220 (342)
T ss_pred HhhhhHHHHHHHHHHHhcCC----CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCeEEecCC
Confidence 99999999999998877888 899999999998999999999999999999988855 4566777788877787776
Q ss_pred hHHHHHHhc---CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccc
Q psy9949 242 PEAMHSIAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESG 318 (383)
Q Consensus 242 ~~~~~~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (383)
.++...+.. ..++|++++++|+...... +++++ ++|+++.++...... . ..+...
T Consensus 221 ~~~~~~~~~~~~~~~~d~~i~~~g~~~~~~~--~~~l~--~~G~~v~~~~~~~~~--------~----~~~~~~------ 278 (342)
T cd08266 221 EDFVREVRELTGKRGVDVVVEHVGAATWEKS--LKSLA--RGGRLVTCGATTGYE--------A----PIDLRH------ 278 (342)
T ss_pred hHHHHHHHHHhCCCCCcEEEECCcHHHHHHH--HHHhh--cCCEEEEEecCCCCC--------C----CcCHHH------
Confidence 666665543 2479999999998655444 88999 999999986432110 0 000000
Q ss_pred cccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 319 ELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
...++..+ .+........+.+++++++++.+.+.+.+.|+++++++|++.+.++...+|++++.
T Consensus 279 ~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 279 VFWRQLSI-LGSTMGTKAELDEALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred HhhcceEE-EEEecCCHHHHHHHHHHHHcCCcccceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 01112222 12233346788999999999999888888999999999999999888889999863
No 95
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=100.00 E-value=3.2e-33 Score=258.56 Aligned_cols=309 Identities=32% Similarity=0.525 Sum_probs=246.3
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
|+++++..++..+.+.++ +.+.|++++++|+||+.++++|++|+....|.... .....+|..+|||
T Consensus 1 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-------------~~~~~~~~~~g~e 66 (309)
T cd05289 1 MKAVRIHEYGGPEVLELA-DVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKA-------------AFPLTLPLIPGHD 66 (309)
T ss_pred CceEEEcccCCccceeec-ccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccc-------------cCCCCCCCccccc
Confidence 688899888877667777 67888899999999999999999999988765110 0123457899999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccC
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVY 186 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~ 186 (383)
++|+|+++|+++..+++||+|+++.....+|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++....++
T Consensus 67 ~~G~v~~~G~~~~~~~~G~~V~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~---- 142 (309)
T cd05289 67 VAGVVVAVGPGVTGFKVGDEVFGMTPFTRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGL---- 142 (309)
T ss_pred eeEEEEeeCCCCCCCCCCCEEEEccCCCCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCC----
Confidence 9999999999999999999999986222349999999999999999999999999999999999999999877777
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD 266 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~ 266 (383)
.++++|+|+|++|++|++++++++..|++|++++++++.+.++++|.+.+++....++.. .....++|+++|++|+...
T Consensus 143 ~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~d~v~~~~~~~~~ 221 (309)
T cd05289 143 KAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAANADFLRSLGADEVIDYTKGDFER-AAAPGGVDAVLDTVGGETL 221 (309)
T ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecchhHHHHHHcCCCEEEeCCCCchhh-ccCCCCceEEEECCchHHH
Confidence 899999999988999999999999999999998865566777889988888777655544 2233579999999998855
Q ss_pred cccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHH
Q psy9949 267 QINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIE 346 (383)
Q Consensus 267 ~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 346 (383)
... +++++ ++|+++.++.... .. . .... .+..+......+..+.+.+++++++
T Consensus 222 ~~~--~~~l~--~~g~~v~~g~~~~-----------~~-~--~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (309)
T cd05289 222 ARS--LALVK--PGGRLVSIAGPPP-----------AE-Q--AAKR---------RGVRAGFVFVEPDGEQLAELAELVE 274 (309)
T ss_pred HHH--HHHHh--cCcEEEEEcCCCc-----------ch-h--hhhh---------ccceEEEEEecccHHHHHHHHHHHH
Confidence 555 88999 9999999854210 00 0 0000 1111111111222678999999999
Q ss_pred cCCcccccceeecCCCHHHHHHHHhcCCCCCeEEE
Q psy9949 347 RGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381 (383)
Q Consensus 347 ~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl 381 (383)
++.+.+.+++.|++++++++++.+.+++..+|+++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 275 AGKLRPVVDRVFPLEDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred CCCEEEeeccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence 99988778889999999999999998888888874
No 96
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=1.4e-33 Score=265.67 Aligned_cols=305 Identities=21% Similarity=0.281 Sum_probs=236.5
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCC-CCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILK-SKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR 105 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~-~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~ 105 (383)
|+++++..++ .++++ +.+.|+|. ++||+||+.++++|+.|+....|.. ...+|.++|+
T Consensus 1 ~~a~~~~~~~---~~~~~-~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~-----------------~~~~~~~~g~ 59 (344)
T cd08284 1 MKAVVFKGPG---DVRVE-EVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHI-----------------PSTPGFVLGH 59 (344)
T ss_pred CeeEEEecCC---CceEE-eccCCCCCCCCeEEEEEEEeeccccchhhhcCCC-----------------CCCCCccccc
Confidence 6788887653 47888 89999885 9999999999999999998887751 1334678999
Q ss_pred ceeEEEEecCCCCCCCCCCCEEEEeec----------------------------CCCCCCceEEEeecCc--ccccCCC
Q psy9949 106 DFCGKIVAKGPRVTDLNIDDVVYGVIQ----------------------------PHKQGSFSKLILADSA--LVHKKPS 155 (383)
Q Consensus 106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~----------------------------~~~~g~~a~~~~v~~~--~~~~ip~ 155 (383)
|++|+|+++|++++.+++||+|++... ...+|+|++|+.++.+ .++++|+
T Consensus 60 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~ 139 (344)
T cd08284 60 EFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPD 139 (344)
T ss_pred ceEEEEEeeCCCccccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCC
Confidence 999999999999999999999998531 0114899999999864 9999999
Q ss_pred CCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHHhcCC
Q psy9949 156 NISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVTSLNP 233 (383)
Q Consensus 156 ~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~~lg~ 233 (383)
++++++++.++.+++|||+++. ..++ +++++|+|+| +|++|++++++|+.+|+ +|+++++. ++.++++++|+
T Consensus 140 ~l~~~~a~~l~~~~~ta~~~~~-~~~~----~~~~~vlI~g-~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~ 213 (344)
T cd08284 140 GLSDEAALLLGDILPTGYFGAK-RAQV----RPGDTVAVIG-CGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGA 213 (344)
T ss_pred CCCHHHhhhhcCchHHHHhhhH-hcCC----ccCCEEEEEC-CcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCC
Confidence 9999999999999999999996 4777 8999999997 89999999999999997 89998744 45677788997
Q ss_pred CeeeeCCChHHHHHHhc---CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHH
Q psy9949 234 NLVIDYNEPEAMHSIAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDL 310 (383)
Q Consensus 234 ~~v~~~~~~~~~~~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (383)
. .++++..++...+.+ ..++|++||++|+......+ +++++ ++|+++.+|....... . ......
T Consensus 214 ~-~~~~~~~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~-~~~l~--~~g~~v~~g~~~~~~~-------~--~~~~~~ 280 (344)
T cd08284 214 E-PINFEDAEPVERVREATEGRGADVVLEAVGGAAALDLA-FDLVR--PGGVISSVGVHTAEEF-------P--FPGLDA 280 (344)
T ss_pred e-EEecCCcCHHHHHHHHhCCCCCCEEEECCCCHHHHHHH-HHhcc--cCCEEEEECcCCCCCc-------c--ccHHHH
Confidence 5 466666556665543 35799999999975443332 88999 9999999864321100 0 000111
Q ss_pred hhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949 311 LKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQGHLRGKIILN 382 (383)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~ 382 (383)
..++..+. .......+.+++++++++++.+++ ++.+++++++++++++.+.+++. ||+|++
T Consensus 281 ---------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~ 343 (344)
T cd08284 281 ---------YNKNLTLR-FGRCPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD 343 (344)
T ss_pred ---------hhcCcEEE-EecCCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence 11111221 112335788999999999999875 46788999999999999988877 999875
No 97
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=1e-33 Score=263.82 Aligned_cols=290 Identities=21% Similarity=0.292 Sum_probs=221.1
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
|||+++.+++ +++++ +.+.|+++++||+||+.++++|++|+....|. ...|.++|||
T Consensus 1 ~~a~~~~~~~---~~~~~-~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~-------------------~~~~~~~G~e 57 (319)
T cd08242 1 MKALVLDGGL---DLRVE-DLPKPEPPPGEALVRVLLAGICNTDLEIYKGY-------------------YPFPGVPGHE 57 (319)
T ss_pred CeeEEEeCCC---cEEEE-ECCCCCCCCCeEEEEEEEEEEccccHHHHcCC-------------------CCCCCccCce
Confidence 6899998744 47888 89999999999999999999999999988775 2257899999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeec-------------------------CCCCCCceEEEeecCcccccCCCCCCHHH
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQ-------------------------PHKQGSFSKLILADSALVHKKPSNISDEE 161 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~-------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~ 161 (383)
++|+|+++|++ +++||+|..... ...+|+|++|++++.++++++|++++.++
T Consensus 58 ~~G~Vv~~G~~---~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~ 134 (319)
T cd08242 58 FVGIVEEGPEA---ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQ 134 (319)
T ss_pred EEEEEEEeCCC---CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHH
Confidence 99999999988 679999974210 01258999999999999999999999998
Q ss_pred HHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCC
Q psy9949 162 AAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYN 240 (383)
Q Consensus 162 aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~ 240 (383)
++.+ ....++|+.+ ...++ +++++|+|+| +|++|++++|+|+.+|++|++++++ ++.+.++++|++.+++++
T Consensus 135 aa~~-~~~~~~~~~~-~~~~~----~~g~~vlV~g-~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~ 207 (319)
T cd08242 135 AVFA-EPLAAALEIL-EQVPI----TPGDKVAVLG-DGKLGLLIAQVLALTGPDVVLVGRHSEKLALARRLGVETVLPDE 207 (319)
T ss_pred hhhh-hHHHHHHHHH-HhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEeCcc
Confidence 8864 3444566655 47777 8999999997 8999999999999999999988854 567888889998887764
Q ss_pred ChHHHHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccc
Q psy9949 241 EPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGEL 320 (383)
Q Consensus 241 ~~~~~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (383)
.. ....++|+++|++|+....... +++++ ++|+++..+.... .. .+++.. + .
T Consensus 208 ~~------~~~~~~d~vid~~g~~~~~~~~-~~~l~--~~g~~v~~~~~~~-----------~~--~~~~~~--~----~ 259 (319)
T cd08242 208 AE------SEGGGFDVVVEATGSPSGLELA-LRLVR--PRGTVVLKSTYAG-----------PA--SFDLTK--A----V 259 (319)
T ss_pred cc------ccCCCCCEEEECCCChHHHHHH-HHHhh--cCCEEEEEcccCC-----------CC--ccCHHH--h----e
Confidence 32 2335799999999885543332 78999 9999997643210 00 011111 1 1
Q ss_pred cCCccEEEEEEcCCHHHHHHHHHHHHcCCc--ccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949 321 CKTNTIRWGFFMPIPYAVKEINKFIERGQI--KPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382 (383)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~ 382 (383)
.+...+. +.. ...+++++++++++++ .+.+.+.|+++++++||+.+.++. .+|+|++
T Consensus 260 ~~~~~i~-~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~ 318 (319)
T cd08242 260 VNEITLV-GSR---CGPFAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPG-ALKVLLR 318 (319)
T ss_pred ecceEEE-EEe---cccHHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCC-ceEEEeC
Confidence 1111221 111 1137889999999998 456788999999999999998666 4799885
No 98
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=1.2e-33 Score=263.20 Aligned_cols=317 Identities=25% Similarity=0.320 Sum_probs=248.2
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
||++++...+.+..+.++ +++.|++.+++|+|++.++++|++|+....|..+ .....|.++|||
T Consensus 1 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~---------------~~~~~~~~~g~e 64 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLG-DLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYP---------------GLPPLPYVPGSD 64 (325)
T ss_pred CceEEEcccCCcccceee-ecCCCCCCCCEEEEEEEEEecChhHhhhccCCCC---------------CCCCCCeecccc
Confidence 678888877766678888 7899999999999999999999999988877511 123467899999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeecC--CCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCc
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQP--HKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGL 184 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~--~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~ 184 (383)
++|+|+++|+++.+|++||+|+++... ...|++++|+.++.+.++++|+++++++++.+++++.+||+++....++
T Consensus 65 ~~G~v~~~g~~~~~~~~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~-- 142 (325)
T cd08253 65 GAGVVEAVGEGVDGLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGA-- 142 (325)
T ss_pred eEEEEEeeCCCCCCCCCCCEEEEeccccCCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCC--
Confidence 999999999999999999999988511 1248999999999999999999999999999999999999999877888
Q ss_pred cCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhc---CCCccEEEEc
Q psy9949 185 VYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAG---AGPYDVILDA 260 (383)
Q Consensus 185 ~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~---~~g~d~v~d~ 260 (383)
+++++++|+|++|++|++++++++..|++|++++++ ++.+.+.++|++.+++....++...+.+ ..++|+++++
T Consensus 143 --~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 220 (325)
T cd08253 143 --KAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEV 220 (325)
T ss_pred --CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHHcCCCceEEEEEC
Confidence 899999999999999999999999999999999865 4567778899988888777666666543 3479999999
Q ss_pred CCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEE--cCCHHHH
Q psy9949 261 AGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFF--MPIPYAV 338 (383)
Q Consensus 261 ~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 338 (383)
+|+...... +++++ ++|+++.++... .. . .. . .. .+... ...+.+... ... ....+.+
T Consensus 221 ~~~~~~~~~--~~~l~--~~g~~v~~~~~~-~~-~--~~--~--~~--~~~~~----~~~~~~~~~--~~~~~~~~~~~~ 280 (325)
T cd08253 221 LANVNLAKD--LDVLA--PGGRIVVYGSGG-LR-G--TI--P--IN--PLMAK----EASIRGVLL--YTATPEERAAAA 280 (325)
T ss_pred CchHHHHHH--HHhhC--CCCEEEEEeecC-Cc-C--CC--C--hh--HHHhc----CceEEeeeh--hhcCHHHHHHHH
Confidence 998765544 78899 999999986432 00 0 00 0 00 00111 111111100 000 0113456
Q ss_pred HHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 339 KEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 339 ~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
+.+.+++.++.+++...+.|++++++++++.+.++...||++++.
T Consensus 281 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 281 EAIAAGLADGALRPVIAREYPLEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred HHHHHHHHCCCccCccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 777788888888877888999999999999999988899999863
No 99
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=1.4e-33 Score=265.55 Aligned_cols=311 Identities=23% Similarity=0.338 Sum_probs=235.3
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
|||+++++.+ .+.++ +.+.|++.++||+||+.++++|++|+....+.. ....|.++|+|
T Consensus 1 ~~a~~~~~~~---~l~~~-~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~-----------------~~~~~~~~g~~ 59 (343)
T cd08236 1 MKALVLTGPG---DLRYE-DIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG-----------------AYHPPLVLGHE 59 (343)
T ss_pred CeeEEEecCC---ceeEE-ecCCCCCCCCeEEEEEEEEEECccchHhhcCCC-----------------CCCCCcccCcc
Confidence 6899998865 37787 789999999999999999999999998877651 23356789999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeec------------------------CCCCCCceEEEeecCcccccCCCCCCHHHH
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQ------------------------PHKQGSFSKLILADSALVHKKPSNISDEEA 162 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~a 162 (383)
++|+|+++|++++.|++||+|+++.. ....|+|++|+.++.+.++++|++++++++
T Consensus 60 ~~G~V~~~g~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~a 139 (343)
T cd08236 60 FSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEA 139 (343)
T ss_pred eEEEEEEECCCCCcCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHH
Confidence 99999999999999999999998621 113599999999999999999999999999
Q ss_pred HhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecC-chHHHHHhcCCCeeeeCC
Q psy9949 163 AGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTCSG-DAKDLVTSLNPNLVIDYN 240 (383)
Q Consensus 163 a~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~~-~~~~~~~~lg~~~v~~~~ 240 (383)
+.+ ..++|||+++. ..++ +++++|+|+| +|.+|++++++|+.+|++ |++++++ ++.++++++|++.+++++
T Consensus 140 a~~-~~~~ta~~~l~-~~~~----~~~~~vlI~g-~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~ 212 (343)
T cd08236 140 AMI-EPAAVALHAVR-LAGI----TLGDTVVVIG-AGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPK 212 (343)
T ss_pred Hhc-chHHHHHHHHH-hcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCc
Confidence 888 57789999996 7777 8999999997 799999999999999996 9888855 456777889998888887
Q ss_pred ChHHHHHHhc---CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhcc
Q psy9949 241 EPEAMHSIAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFES 317 (383)
Q Consensus 241 ~~~~~~~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (383)
... ..++.. ..++|+++||+|+....... +++++ ++|+++.++.... . . ....... ..+.. +
T Consensus 213 ~~~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~-~~~l~--~~G~~v~~g~~~~-~-~--~~~~~~~---~~~~~----~ 277 (343)
T cd08236 213 EED-VEKVRELTEGRGADLVIEAAGSPATIEQA-LALAR--PGGKVVLVGIPYG-D-V--TLSEEAF---EKILR----K 277 (343)
T ss_pred ccc-HHHHHHHhCCCCCCEEEECCCCHHHHHHH-HHHhh--cCCEEEEEcccCC-C-c--ccccCCH---HHHHh----c
Confidence 655 555443 24699999999875443332 89999 9999999864320 0 0 0000000 00001 1
Q ss_pred ccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcc--cccceeecCCCHHHHHHHHhc-CCCCCeEEE
Q psy9949 318 GELCKTNTIRWGFFMPIPYAVKEINKFIERGQIK--PVIDSKYNFCELPTAFEKVQQ-GHLRGKIIL 381 (383)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~~~~~~~l~~~~~a~~~l~~-~~~~gkvvl 381 (383)
...+.+... ........+.+.++.++++++++. +.+.+.+++++++++++.+.+ +...||+|+
T Consensus 278 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 278 ELTIQGSWN-SYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred CcEEEEEee-ccccccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 112221111 000001256788899999999875 456788999999999999998 667788874
No 100
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=3.4e-33 Score=259.82 Aligned_cols=315 Identities=26% Similarity=0.336 Sum_probs=246.5
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
||++++.+.+.+..+++. +.+.|.+.+++|+||+.++++|++|+....|..+ ....+|.++|||
T Consensus 1 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~---------------~~~~~~~~~g~e 64 (323)
T cd05276 1 MKAIVIKEPGGPEVLELG-EVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYP---------------PPPGASDILGLE 64 (323)
T ss_pred CeEEEEecCCCcccceEE-ecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCC---------------CCCCCCCcccce
Confidence 799999988877778888 7787888999999999999999999988866411 123457899999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccC
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVY 186 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~ 186 (383)
++|+|+++|+++..+++||+|+++.. +|+|++|+.++.+.++++|+++++.+++.++..+.++|+++.+...+
T Consensus 65 ~~G~v~~vg~~~~~~~~Gd~V~~~~~---~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~---- 137 (323)
T cd05276 65 VAGVVVAVGPGVTGWKVGDRVCALLA---GGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGL---- 137 (323)
T ss_pred eEEEEEeeCCCCCCCCCCCEEEEecC---CCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCC----
Confidence 99999999999999999999998853 59999999999999999999999999999999999999998877788
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhc---CCCccEEEEcCC
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAG---AGPYDVILDAAG 262 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~---~~g~d~v~d~~g 262 (383)
+++++|+|+|++|++|++++++++..|++|+++.++ ++.+.++++|.+.+++....++.+.+.. ..++|++||++|
T Consensus 138 ~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (323)
T cd05276 138 KAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVG 217 (323)
T ss_pred CCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEeCCchhHHHHHHHHhCCCCeEEEEECCc
Confidence 899999999999999999999999999999998865 4566778889888888877666666543 247999999999
Q ss_pred CCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEE--EEcC--CHHHH
Q psy9949 263 IPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWG--FFMP--IPYAV 338 (383)
Q Consensus 263 ~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~ 338 (383)
+...... +++++ ++|+++.++....... .. . ...+... ...+.+...... ...+ ..+.+
T Consensus 218 ~~~~~~~--~~~~~--~~g~~i~~~~~~~~~~---~~--~----~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (323)
T cd05276 218 GDYLARN--LRALA--PDGRLVLIGLLGGAKA---EL--D----LAPLLRK----RLTLTGSTLRSRSLEEKAALAAAFR 280 (323)
T ss_pred hHHHHHH--HHhhc--cCCEEEEEecCCCCCC---CC--c----hHHHHHh----CCeEEEeeccchhhhccHHHHHHHH
Confidence 8775544 78888 9999998864211110 00 0 0001111 111121111000 0000 13456
Q ss_pred HHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEE
Q psy9949 339 KEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381 (383)
Q Consensus 339 ~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl 381 (383)
.++.++++++++.+...+.|++++++++++.+.++...||+++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 281 EHVWPLFASGRIRPVIDKVFPLEEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred HHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 7888899999998778889999999999999998888888874
No 101
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=3.9e-33 Score=259.03 Aligned_cols=313 Identities=26% Similarity=0.346 Sum_probs=244.0
Q ss_pred eeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCce
Q psy9949 28 AAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDF 107 (383)
Q Consensus 28 ~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~ 107 (383)
+|+....++.+..+.+. +.+.|.+.+++|+|+|.++++|++|+....+.. ...+|.++|||+
T Consensus 1 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~-----------------~~~~~~~~g~e~ 62 (320)
T cd05286 1 KAVRIHKTGGPEVLEYE-DVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLY-----------------PLPLPFVLGVEG 62 (320)
T ss_pred CeEEEecCCCccceEEe-ecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCC-----------------CCCCCccCCcce
Confidence 46677777777677787 677778899999999999999999998887751 123467899999
Q ss_pred eEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCC
Q psy9949 108 CGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYP 187 (383)
Q Consensus 108 ~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~ 187 (383)
+|+|+.+|+++.++++||+|+++. ..|+|++|+.++.+.++++|++++..+++.+++..++||+++....++ +
T Consensus 63 ~G~v~~~g~~~~~~~~G~~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~----~ 135 (320)
T cd05286 63 AGVVEAVGPGVTGFKVGDRVAYAG---PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPV----K 135 (320)
T ss_pred eEEEEEECCCCCCCCCCCEEEEec---CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCC----C
Confidence 999999999999999999999885 148999999999999999999999999999999999999999877888 8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhc---CCCccEEEEcCCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAG---AGPYDVILDAAGI 263 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~---~~g~d~v~d~~g~ 263 (383)
++++|+|+|++|++|++++++|+.+|++|++++++ ++.+.++++|++.+++....++.+.+.. ..++|++++|+++
T Consensus 136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~ 215 (320)
T cd05286 136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELARAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVGK 215 (320)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECCCc
Confidence 99999999999999999999999999999999855 4567778899998888877777766654 2479999999998
Q ss_pred CcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEc--CCHHHHHHH
Q psy9949 264 PLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFM--PIPYAVKEI 341 (383)
Q Consensus 264 ~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 341 (383)
...... +++++ ++|+++.++...... . .+ .. ..+....+ .+.+......... ...+.+.++
T Consensus 216 ~~~~~~--~~~l~--~~g~~v~~g~~~~~~-~--~~----~~--~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 278 (320)
T cd05286 216 DTFEGS--LDSLR--PRGTLVSFGNASGPV-P--PF----DL--LRLSKGSL----FLTRPSLFHYIATREELLARAAEL 278 (320)
T ss_pred HhHHHH--HHhhc--cCcEEEEEecCCCCC-C--cc----CH--HHHHhcCc----EEEEEehhhhcCCHHHHHHHHHHH
Confidence 654444 89999 999999986421110 0 00 00 00101111 1111000000000 113456788
Q ss_pred HHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949 342 NKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382 (383)
Q Consensus 342 ~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~ 382 (383)
+++++++.+.+.+.+.|++++++++++.+.++...||++++
T Consensus 279 ~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 319 (320)
T cd05286 279 FDAVASGKLKVEIGKRYPLADAAQAHRDLESRKTTGKLLLI 319 (320)
T ss_pred HHHHHCCCCcCcccceEcHHHHHHHHHHHHcCCCCceEEEe
Confidence 89999999887777889999999999999988888999874
No 102
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=6.9e-33 Score=257.82 Aligned_cols=315 Identities=33% Similarity=0.479 Sum_probs=237.3
Q ss_pred EeecCCCcee--EeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCceeE
Q psy9949 32 ISSYGGADEL--QFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCG 109 (383)
Q Consensus 32 ~~~~g~~~~l--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G 109 (383)
++..++++++ +++ +.+.|++.++||+|++.++++|++|+....|..+. ......|..+|||++|
T Consensus 3 ~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-------------~~~~~~~~~~g~e~~G 68 (319)
T cd08267 3 YTRYGSPEVLLLLEV-EVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKL-------------LLGRPFPPIPGMDFAG 68 (319)
T ss_pred eCCCCChhhhhhccc-cCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcc-------------cccCCCCCcccceeeE
Confidence 4455665554 777 78999999999999999999999999988765110 0112346789999999
Q ss_pred EEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCC
Q psy9949 110 KIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRD 189 (383)
Q Consensus 110 ~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~ 189 (383)
+|+++|+++.++++||+|+++......|+|++|+.++.+.++++|+++++++++.+++.+.+||+++....++ +++
T Consensus 69 ~v~~~G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~----~~g 144 (319)
T cd08267 69 EVVAVGSGVTRFKVGDEVFGRLPPKGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKV----KPG 144 (319)
T ss_pred EEEEeCCCCCCCCCCCEEEEeccCCCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCC----CCC
Confidence 9999999999999999999886322358999999999999999999999999999999999999999877778 899
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCccccc
Q psy9949 190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQIN 269 (383)
Q Consensus 190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~~~ 269 (383)
++|+|+|++|++|++++++|+..|++|++++++++.+.++++|.+++++....++........++|++++|+|+......
T Consensus 145 ~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~ 224 (319)
T cd08267 145 QRVLINGASGGVGTFAVQIAKALGAHVTGVCSTRNAELVRSLGADEVIDYTTEDFVALTAGGEKYDVIFDAVGNSPFSLY 224 (319)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCHHHHHHHHHcCCCEeecCCCCCcchhccCCCCCcEEEECCCchHHHHH
Confidence 99999998899999999999999999999887666677888998888876655443112223579999999985432222
Q ss_pred ccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCC
Q psy9949 270 SYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQ 349 (383)
Q Consensus 270 ~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 349 (383)
.....++ ++|+++.++......... .... .+.. .............+..+.+.++++++++++
T Consensus 225 ~~~~~l~--~~g~~i~~g~~~~~~~~~------~~~~--~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 287 (319)
T cd08267 225 RASLALK--PGGRYVSVGGGPSGLLLV------LLLL--PLTL-------GGGGRRLKFFLAKPNAEDLEQLAELVEEGK 287 (319)
T ss_pred HhhhccC--CCCEEEEecccccccccc------cccc--chhh-------ccccceEEEEEecCCHHHHHHHHHHHHCCC
Confidence 0033377 999999986432111000 0000 0000 000011111112233788999999999999
Q ss_pred cccccceeecCCCHHHHHHHHhcCCCCCeEEE
Q psy9949 350 IKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381 (383)
Q Consensus 350 l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl 381 (383)
+.+.+.+.|+++++++|++.+.+++..+|+++
T Consensus 288 ~~~~~~~~~~~~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 288 LKPVIDSVYPLEDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred eeeeeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence 98888889999999999999998888888874
No 103
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=4.2e-33 Score=262.49 Aligned_cols=305 Identities=19% Similarity=0.268 Sum_probs=231.5
Q ss_pred eeeEEEeecCCCceeEeeccccCCCC-CCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPIL-KSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR 105 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~ 105 (383)
||++++.+++ .+.++ +.|.|+| +++||+||+.++++|++|+....|.. ....|.++||
T Consensus 1 m~~~~~~~~~---~~~~~-~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~-----------------~~~~~~~~g~ 59 (345)
T cd08287 1 MRATVIHGPG---DIRVE-EVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVS-----------------PTRAPAPIGH 59 (345)
T ss_pred CceeEEecCC---ceeEE-eCCCCCCCCCCeEEEEEeeeeecccchhhhcCCC-----------------CCCCCccccc
Confidence 6889998655 37888 7899986 89999999999999999998887751 1234789999
Q ss_pred ceeEEEEecCCCCCCCCCCCEEEE-eec-----------------------CCCCCCceEEEeecCc--ccccCCCCCCH
Q psy9949 106 DFCGKIVAKGPRVTDLNIDDVVYG-VIQ-----------------------PHKQGSFSKLILADSA--LVHKKPSNISD 159 (383)
Q Consensus 106 e~~G~Vv~vG~~v~~~~~Gd~V~~-~~~-----------------------~~~~g~~a~~~~v~~~--~~~~ip~~~~~ 159 (383)
|++|+|+++|+++..+++||+|++ +.. ...+|+|++|+.++.+ .++++|+++++
T Consensus 60 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~ 139 (345)
T cd08287 60 EFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSD 139 (345)
T ss_pred ceEEEEEEeCCCCCccCCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCCh
Confidence 999999999999999999999987 211 0123899999999974 99999999988
Q ss_pred HHHH-----hhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecCc-hHHHHHhcC
Q psy9949 160 EEAA-----GVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTCSGD-AKDLVTSLN 232 (383)
Q Consensus 160 ~~aa-----~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~~~-~~~~~~~lg 232 (383)
+.+. ++...+.+||+++. .+++ +++++|+|.| +|++|++++++|+..|++ ++++++++ +.++++++|
T Consensus 140 ~~~~~~~~~~l~~~~~~a~~~~~-~~~~----~~g~~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g 213 (345)
T cd08287 140 DEDLLPSLLALSDVMGTGHHAAV-SAGV----RPGSTVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFG 213 (345)
T ss_pred hhhhhhhhHhhhcHHHHHHHHHH-hcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcC
Confidence 3221 22256788999985 6777 8999999976 899999999999999995 77776554 567788999
Q ss_pred CCeeeeCCChHHHHHHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHH
Q psy9949 233 PNLVIDYNEPEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFD 309 (383)
Q Consensus 233 ~~~v~~~~~~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (383)
++.+++++..++.+.+... .++|+++|++|+......+ +++++ ++|+++.++.+.. . . .++
T Consensus 214 a~~v~~~~~~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~-~~~l~--~~g~~v~~g~~~~-~---~---------~~~ 277 (345)
T cd08287 214 ATDIVAERGEEAVARVRELTGGVGADAVLECVGTQESMEQA-IAIAR--PGGRVGYVGVPHG-G---V---------ELD 277 (345)
T ss_pred CceEecCCcccHHHHHHHhcCCCCCCEEEECCCCHHHHHHH-HHhhc--cCCEEEEecccCC-C---C---------ccC
Confidence 9999998877777666542 4799999999875543333 88999 9999998854320 0 0 011
Q ss_pred HhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949 310 LLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQGHLRGKIILN 382 (383)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~ 382 (383)
.. .. ..++..+. +......+.+.+++++++++++++ ++.+.++++++++|++.+.+++.. |++|+
T Consensus 278 ~~-~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~ 344 (345)
T cd08287 278 VR-EL-----FFRNVGLA-GGPAPVRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAI-KVLLR 344 (345)
T ss_pred HH-HH-----HhcceEEE-EecCCcHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCce-EEEeC
Confidence 10 00 11122221 222334678999999999999876 457889999999999998877664 98875
No 104
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1.1e-32 Score=258.38 Aligned_cols=304 Identities=23% Similarity=0.322 Sum_probs=234.0
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
|||+++.+++ .++++ +.+.|++.++||+||+.++++|++|+....|.. ...+|.++|+|
T Consensus 1 ~~a~~~~~~~---~~~~~-~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~-----------------~~~~p~~~g~~ 59 (334)
T cd08234 1 MKALVYEGPG---ELEVE-EVPVPEPGPDEVLIKVAACGICGTDLHIYEGEF-----------------GAAPPLVPGHE 59 (334)
T ss_pred CeeEEecCCC---ceEEE-eccCCCCCCCeEEEEEEEEeEchhhhHHhcCCC-----------------CCCCCcccccc
Confidence 6899998766 47888 899999999999999999999999999888751 12367899999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeec------------------------CCCCCCceEEEeecCcccccCCCCCCHHHH
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQ------------------------PHKQGSFSKLILADSALVHKKPSNISDEEA 162 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~a 162 (383)
++|+|+++|++++.+++||+|++... ....|+|++|++++.++++++|+++++.++
T Consensus 60 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~a 139 (334)
T cd08234 60 FAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEA 139 (334)
T ss_pred eEEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHH
Confidence 99999999999999999999987210 113589999999999999999999999999
Q ss_pred HhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecC-chHHHHHhcCCCeeeeCC
Q psy9949 163 AGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTCSG-DAKDLVTSLNPNLVIDYN 240 (383)
Q Consensus 163 a~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~~-~~~~~~~~lg~~~v~~~~ 240 (383)
+.+ ..+.++++++ +.+++ +++++|+|+| +|++|.+++++|+..|++ |+++.++ ++.+.++++|++.+++++
T Consensus 140 a~~-~~~~~a~~~l-~~~~~----~~g~~vlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~ 212 (334)
T cd08234 140 ALA-EPLSCAVHGL-DLLGI----KPGDSVLVFG-AGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPS 212 (334)
T ss_pred hhh-hHHHHHHHHH-HhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCC
Confidence 876 6778899998 67888 8999999997 799999999999999996 7777754 456777889988888877
Q ss_pred ChHHHHH-HhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhcccc
Q psy9949 241 EPEAMHS-IAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGE 319 (383)
Q Consensus 241 ~~~~~~~-i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (383)
..++..+ .....++|++||++|........ +++++ ++|+++.++...... ......+.+.
T Consensus 213 ~~~~~~~~~~~~~~vd~v~~~~~~~~~~~~~-~~~l~--~~G~~v~~g~~~~~~--------~~~~~~~~~~-------- 273 (334)
T cd08234 213 REDPEAQKEDNPYGFDVVIEATGVPKTLEQA-IEYAR--RGGTVLVFGVYAPDA--------RVSISPFEIF-------- 273 (334)
T ss_pred CCCHHHHHHhcCCCCcEEEECCCChHHHHHH-HHHHh--cCCEEEEEecCCCCC--------CcccCHHHHH--------
Confidence 6554443 22335799999999865443332 88999 999999986432100 0000011111
Q ss_pred ccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcCCCCCeEEE
Q psy9949 320 LCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQGHLRGKIIL 381 (383)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~~~~gkvvl 381 (383)
.++..+. + .....+.+++++++++++++.+ .+.+++++++++++++.+.+ ...||+|+
T Consensus 274 -~~~~~~~-~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 274 -QKELTII-G-SFINPYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred -hCCcEEE-E-eccCHHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 0111111 1 1123677899999999999864 35678999999999999998 77889886
No 105
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=5.8e-33 Score=259.78 Aligned_cols=316 Identities=21% Similarity=0.280 Sum_probs=234.3
Q ss_pred eeeEEEeecC----CCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCcc
Q psy9949 27 TAAWQISSYG----GADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLT 102 (383)
Q Consensus 27 ~~a~~~~~~g----~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~ 102 (383)
+++|++...+ .++.+.++ +.+.|++.+++|+||+.++++|+.|.....+.... ..+...+.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~-------------~~~~~~~~~ 67 (329)
T cd05288 2 NRQVVLAKRPEGPPPPDDFELV-EVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSY-------------SPPVQLGEP 67 (329)
T ss_pred CcEEEEeccCCCCCCccceeEE-eccCCCCCCCeEEEEEEEEecCHHHhhhhccCccc-------------CCCccCCCc
Confidence 5677777544 45678998 89999999999999999999999887665553110 011223567
Q ss_pred ccCceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecC-cccccCCCCCC--HHHHHh-hhHHHHHHHHHHHH
Q psy9949 103 LGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADS-ALVHKKPSNIS--DEEAAG-VLYTGLTAWSALQI 178 (383)
Q Consensus 103 ~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~-~~~~~ip~~~~--~~~aa~-l~~~~~tA~~~l~~ 178 (383)
+|+|++|+|+++|++ ++++||+|+++ ++|++|+.++. +.++++|++++ +.+++. +++++.|||+++..
T Consensus 68 ~g~e~~G~V~~~G~~--~~~~Gd~V~~~------~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~ 139 (329)
T cd05288 68 MRGGGVGEVVESRSP--DFKVGDLVSGF------LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTE 139 (329)
T ss_pred ccCceEEEEEecCCC--CCCCCCEEecc------cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHh
Confidence 899999999999964 79999999876 58999999999 99999999995 555555 88899999999987
Q ss_pred hhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHh-cCCCeeeeCCChHHHHHHhcC--CCc
Q psy9949 179 TAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTS-LNPNLVIDYNEPEAMHSIAGA--GPY 254 (383)
Q Consensus 179 ~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~-lg~~~v~~~~~~~~~~~i~~~--~g~ 254 (383)
...+ .++++|+|+|++|++|++++++|+..|++|++++++ ++.+.+++ +|++.++++++.++.+++... +++
T Consensus 140 ~~~~----~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~ 215 (329)
T cd05288 140 IGKP----KPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAPDGI 215 (329)
T ss_pred ccCC----CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHHHHHhccCCc
Confidence 7777 899999999999999999999999999999999865 46677777 999999988877777666543 579
Q ss_pred cEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCC
Q psy9949 255 DVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPI 334 (383)
Q Consensus 255 d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (383)
|++|||+|+...... +++++ ++|+++.++......... . .+.. ....... ++..+.+.... ......
T Consensus 216 d~vi~~~g~~~~~~~--~~~l~--~~G~~v~~g~~~~~~~~~--~-~~~~-~~~~~~~----~~~~~~~~~~~-~~~~~~ 282 (329)
T cd05288 216 DVYFDNVGGEILDAA--LTLLN--KGGRIALCGAISQYNATE--P-PGPK-NLGNIIT----KRLTMQGFIVS-DYADRF 282 (329)
T ss_pred eEEEEcchHHHHHHH--HHhcC--CCceEEEEeeccCccccc--c-cccc-cHHHHhh----CcceEEeecch-hhHHHH
Confidence 999999998655544 88999 999999986421110000 0 0000 0000001 11111111100 000001
Q ss_pred HHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEE
Q psy9949 335 PYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381 (383)
Q Consensus 335 ~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl 381 (383)
.+.+.+++++++++.+++.....+++++++++++.+.+++..||+++
T Consensus 283 ~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 283 PEALAELAKWLAEGKLKYREDVVEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred HHHHHHHHHHHHCCCccccccccccHHHHHHHHHHHhcCCCccceeC
Confidence 35688899999999998766667899999999999998888888874
No 106
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=8.7e-33 Score=259.90 Aligned_cols=309 Identities=22% Similarity=0.286 Sum_probs=230.9
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
||++++..++. .+++. +.+.|+++++|++||+.++++|++|+.+..+... . .....+|.++|||
T Consensus 1 ~~~~~~~~~~~--~~~~~-~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~------~-------~~~~~~~~~~g~e 64 (341)
T cd05281 1 MKAIVKTKAGP--GAELV-EVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEW------A-------QSRIKPPLIFGHE 64 (341)
T ss_pred CcceEEecCCC--ceEEE-eCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCC------c-------cccCCCCcccccc
Confidence 68899997764 47888 7899999999999999999999999987654210 0 0112356789999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeec------------------------CCCCCCceEEEeecCcccccCCCCCCHHHH
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQ------------------------PHKQGSFSKLILADSALVHKKPSNISDEEA 162 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~a 162 (383)
++|+|+++|+++..+++||+|+++.. ....|+|++|++++.+.++++|++++++.+
T Consensus 65 ~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~~a 144 (341)
T cd05281 65 FAGEVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPEIA 144 (341)
T ss_pred eEEEEEEECCCCCCCCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHHHh
Confidence 99999999999999999999988510 012589999999999999999999998555
Q ss_pred HhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHHhcCCCeeeeCC
Q psy9949 163 AGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVTSLNPNLVIDYN 240 (383)
Q Consensus 163 a~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~~lg~~~v~~~~ 240 (383)
+++..+.++++++. ... +++++|+|+| +|++|++++++|+.+|+ +|+++.++ ++.++++++|++.+++++
T Consensus 145 -~~~~~~~~a~~~~~--~~~----~~g~~vlV~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~ 216 (341)
T cd05281 145 -SIQEPLGNAVHTVL--AGD----VSGKSVLITG-CGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPR 216 (341)
T ss_pred -hhhhHHHHHHHHHH--hcC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcc
Confidence 56667778888875 344 7899999987 79999999999999999 78888644 456778899998888877
Q ss_pred ChHHHHHHhc---CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhcc
Q psy9949 241 EPEAMHSIAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFES 317 (383)
Q Consensus 241 ~~~~~~~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (383)
..++. ++.+ .+++|++||++|+....... +++++ ++|+++.++.... . .. +.+..
T Consensus 217 ~~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~-~~~l~--~~G~~v~~g~~~~-~---~~---------~~~~~----- 274 (341)
T cd05281 217 EEDVV-EVKSVTDGTGVDVVLEMSGNPKAIEQG-LKALT--PGGRVSILGLPPG-P---VD---------IDLNN----- 274 (341)
T ss_pred cccHH-HHHHHcCCCCCCEEEECCCCHHHHHHH-HHHhc--cCCEEEEEccCCC-C---cc---------cccch-----
Confidence 66665 5543 34799999999876543332 88999 9999998864211 0 00 00000
Q ss_pred ccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcc--cccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949 318 GELCKTNTIRWGFFMPIPYAVKEINKFIERGQIK--PVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382 (383)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~ 382 (383)
....++..+.........+.+.+++++++++.+. +.+.+.++++++++||+.+.+++ .||+|++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~ 340 (341)
T cd05281 275 LVIFKGLTVQGITGRKMFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLY 340 (341)
T ss_pred hhhccceEEEEEecCCcchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEec
Confidence 0111222221111122245678899999999876 45677899999999999999988 8999975
No 107
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=3e-32 Score=258.48 Aligned_cols=308 Identities=23% Similarity=0.322 Sum_probs=224.0
Q ss_pred ceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949 26 RTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR 105 (383)
Q Consensus 26 ~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~ 105 (383)
.|++|.. .+ ..++++ +.+.|+++++||+||+.++++|++|+....+.... .....+|.++||
T Consensus 18 ~~~~~~~-~~---~~l~~~-~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~-------------~~~~~~p~~~G~ 79 (364)
T PLN02702 18 NMAAWLV-GV---NTLKIQ-PFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCA-------------DFVVKEPMVIGH 79 (364)
T ss_pred cceEEEe-cC---CceEEE-eccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCc-------------cccCCCCccccc
Confidence 3555554 32 347787 78888899999999999999999999988763100 001235788999
Q ss_pred ceeEEEEecCCCCCCCCCCCEEEEe-------------------------ecCCCCCCceEEEeecCcccccCCCCCCHH
Q psy9949 106 DFCGKIVAKGPRVTDLNIDDVVYGV-------------------------IQPHKQGSFSKLILADSALVHKKPSNISDE 160 (383)
Q Consensus 106 e~~G~Vv~vG~~v~~~~~Gd~V~~~-------------------------~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~ 160 (383)
|++|+|+++|+++++|++||+|++. .....+|+|++|+.++.+.++++|++++++
T Consensus 80 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~ 159 (364)
T PLN02702 80 ECAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLE 159 (364)
T ss_pred ceeEEEEEECCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHH
Confidence 9999999999999999999999862 111125899999999999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecC-chHHHHHhcCCCeeee
Q psy9949 161 EAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTCSG-DAKDLVTSLNPNLVID 238 (383)
Q Consensus 161 ~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~~-~~~~~~~~lg~~~v~~ 238 (383)
+++... .+.++|+++ ...++ +++++|+|+| +|++|++++++|+.+|++ ++++.++ ++.++++++|++.+++
T Consensus 160 ~aa~~~-~~~~a~~~~-~~~~~----~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~ 232 (364)
T PLN02702 160 EGAMCE-PLSVGVHAC-RRANI----GPETNVLVMG-AGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVL 232 (364)
T ss_pred HHhhhh-HHHHHHHHH-HhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEe
Confidence 988632 334588887 57777 8999999997 799999999999999995 5555544 4567888999988766
Q ss_pred CC--ChHHHHHHhc-----CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHh
Q psy9949 239 YN--EPEAMHSIAG-----AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLL 311 (383)
Q Consensus 239 ~~--~~~~~~~i~~-----~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (383)
++ ..++.+++.. .+++|++||++|+....... +++++ ++|+++.+|.... . . ..... ...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~-~~~l~--~~G~~v~~g~~~~---~-~----~~~~~--~~~ 299 (364)
T PLN02702 233 VSTNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTA-LEATR--AGGKVCLVGMGHN---E-M----TVPLT--PAA 299 (364)
T ss_pred cCcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHH-HHHHh--cCCEEEEEccCCC---C-C----cccHH--HHH
Confidence 43 3455555432 24799999999965443333 89999 9999999864210 0 0 00111 111
Q ss_pred hhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcc--cccceeecC--CCHHHHHHHHhcCCCCCeEEEe
Q psy9949 312 KSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIK--PVIDSKYNF--CELPTAFEKVQQGHLRGKIILN 382 (383)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~~~~~~~l--~~~~~a~~~l~~~~~~gkvvl~ 382 (383)
.++..+. +.. .....++.++++++++++. +.+.++|++ +++++|++.+.+++..+|+|+.
T Consensus 300 ---------~~~~~i~-~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 300 ---------AREVDVV-GVF-RYRNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred ---------hCccEEE-Eec-cChHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 1111221 111 1246788999999999885 456778665 7999999999988888999985
No 108
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.1e-32 Score=257.48 Aligned_cols=304 Identities=23% Similarity=0.296 Sum_probs=227.9
Q ss_pred EEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCceeE
Q psy9949 30 WQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCG 109 (383)
Q Consensus 30 ~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G 109 (383)
+++++++ .+.++ +.+.|++.++||+|||.++++|+.|++...+... . .....+|.++|+|++|
T Consensus 2 ~~~~~~~---~~~~~-~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~------~-------~~~~~~~~~~g~e~~G 64 (343)
T cd05285 2 AVLHGPG---DLRLE-ERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRI------G-------DFVVKEPMVLGHESAG 64 (343)
T ss_pred ceEecCC---ceeEE-ECCCCCCCCCeEEEEEEEeeEccccHHHHccCCC------c-------ccCCCCCcccCcceeE
Confidence 4555543 47888 8899999999999999999999999987643200 0 0012356789999999
Q ss_pred EEEecCCCCCCCCCCCEEEEee------------------------c-CCCCCCceEEEeecCcccccCCCCCCHHHHHh
Q psy9949 110 KIVAKGPRVTDLNIDDVVYGVI------------------------Q-PHKQGSFSKLILADSALVHKKPSNISDEEAAG 164 (383)
Q Consensus 110 ~Vv~vG~~v~~~~~Gd~V~~~~------------------------~-~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~ 164 (383)
+|+++|+++++|++||+|++.. . ....|+|++|++++.+.++++|+++++++++.
T Consensus 65 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~ 144 (343)
T cd05285 65 TVVAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGAL 144 (343)
T ss_pred EEEeeCCCCCCCCCCCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhh
Confidence 9999999999999999998621 0 11358999999999999999999999999987
Q ss_pred hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecC-chHHHHHhcCCCeeeeCCCh
Q psy9949 165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTCSG-DAKDLVTSLNPNLVIDYNEP 242 (383)
Q Consensus 165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~~-~~~~~~~~lg~~~v~~~~~~ 242 (383)
+ .++.+||+++ ..+++ +++++|+|+| +|++|++++++|+.+|++ |++++++ ++.++++++|++.+++++..
T Consensus 145 ~-~~~~~a~~~~-~~~~~----~~g~~vlI~g-~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~ 217 (343)
T cd05285 145 V-EPLSVGVHAC-RRAGV----RPGDTVLVFG-AGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTE 217 (343)
T ss_pred h-hHHHHHHHHH-HhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccccc
Confidence 7 5778899997 57888 9999999987 799999999999999996 8888755 46677888999999988765
Q ss_pred HH---HHHHhc---CCCccEEEEcCCCCc-ccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhh
Q psy9949 243 EA---MHSIAG---AGPYDVILDAAGIPL-DQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNF 315 (383)
Q Consensus 243 ~~---~~~i~~---~~g~d~v~d~~g~~~-~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (383)
++ .+++.+ ..++|++|||+|+.. .... +++++ ++|+++.++..... ... . .....
T Consensus 218 ~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~--~~~l~--~~G~~v~~g~~~~~----~~~--~--~~~~~------ 279 (343)
T cd05285 218 DTPESAEKIAELLGGKGPDVVIECTGAESCIQTA--IYATR--PGGTVVLVGMGKPE----VTL--P--LSAAS------ 279 (343)
T ss_pred cchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHH--HHHhh--cCCEEEEEccCCCC----Ccc--C--HHHHh------
Confidence 53 555543 246999999999863 3334 88999 99999988632110 000 0 00111
Q ss_pred ccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcc--cccceeecCCCHHHHHHHHhcCC-CCCeEEEe
Q psy9949 316 ESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIK--PVIDSKYNFCELPTAFEKVQQGH-LRGKIILN 382 (383)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~~~~~~~l~~~~~a~~~l~~~~-~~gkvvl~ 382 (383)
.++.... +.. ...+.+.+++++++++.+. +.+.++|+++++.+|++.+.+++ ..+|++|.
T Consensus 280 -----~~~~~~~-~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~ 342 (343)
T cd05285 280 -----LREIDIR-GVF-RYANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVIE 342 (343)
T ss_pred -----hCCcEEE-Eec-cChHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEEe
Confidence 1111111 111 1237788999999999875 45677899999999999998775 34899874
No 109
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=2.9e-32 Score=255.25 Aligned_cols=304 Identities=26% Similarity=0.352 Sum_probs=236.0
Q ss_pred eeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCce
Q psy9949 28 AAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDF 107 (383)
Q Consensus 28 ~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~ 107 (383)
|+++++++|. .+.++ +.+.|.+.+++|+|++.++++|++|+....|.. ....+|.++|||+
T Consensus 1 ~~~~~~~~~~--~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~----------------~~~~~p~~~g~e~ 61 (330)
T cd08245 1 KAAVVHAAGG--PLEPE-EVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDW----------------GGSKYPLVPGHEI 61 (330)
T ss_pred CeEEEecCCC--CceEE-eccCCCCCCCeEEEEEEEEeccHHHHHHHcCCC----------------CCCCCCcccCccc
Confidence 5788888764 37888 889999999999999999999999999887751 2234578999999
Q ss_pred eEEEEecCCCCCCCCCCCEEEEee-------------------------cCCCCCCceEEEeecCcccccCCCCCCHHHH
Q psy9949 108 CGKIVAKGPRVTDLNIDDVVYGVI-------------------------QPHKQGSFSKLILADSALVHKKPSNISDEEA 162 (383)
Q Consensus 108 ~G~Vv~vG~~v~~~~~Gd~V~~~~-------------------------~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~a 162 (383)
+|+|+++|+++++|++||+|+... ....+|+|++|+.++.++++++|+++++.++
T Consensus 62 ~G~v~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~ 141 (330)
T cd08245 62 VGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQA 141 (330)
T ss_pred eEEEEEECCCCcccccCCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHh
Confidence 999999999999999999997421 1113589999999999999999999999999
Q ss_pred HhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCC
Q psy9949 163 AGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNE 241 (383)
Q Consensus 163 a~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~ 241 (383)
+.+++.++|||+++.. .++ +++++|+|+| +|++|++++++|+.+|++|++++++ ++.+.++++|++.+++...
T Consensus 142 ~~l~~~~~ta~~~l~~-~~~----~~~~~vlI~g-~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~ 215 (330)
T cd08245 142 APLLCAGITVYSALRD-AGP----RPGERVAVLG-IGGLGHLAVQYARAMGFETVAITRSPDKRELARKLGADEVVDSGA 215 (330)
T ss_pred hhhhhhHHHHHHHHHh-hCC----CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCcEEeccCC
Confidence 9999999999999964 677 8999999997 7889999999999999999999855 4567778899888887665
Q ss_pred hHHHHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhcccccc
Q psy9949 242 PEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELC 321 (383)
Q Consensus 242 ~~~~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (383)
...... ...++|+++|+++........ +++++ ++|+++.++..... + ... ....+ ..
T Consensus 216 ~~~~~~--~~~~~d~vi~~~~~~~~~~~~-~~~l~--~~G~~i~~~~~~~~-----~--~~~--~~~~~---------~~ 272 (330)
T cd08245 216 ELDEQA--AAGGADVILVTVVSGAAAEAA-LGGLR--RGGRIVLVGLPESP-----P--FSP--DIFPL---------IM 272 (330)
T ss_pred cchHHh--ccCCCCEEEECCCcHHHHHHH-HHhcc--cCCEEEEECCCCCC-----c--ccc--chHHH---------Hh
Confidence 444333 224799999998865443333 88999 99999998642111 0 000 00111 11
Q ss_pred CCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEE
Q psy9949 322 KTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381 (383)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl 381 (383)
++..+. +......+.+++++++++++.+.+ ..+.+++++++++++.+.+++..||+|+
T Consensus 273 ~~~~~~-~~~~~~~~~~~~~~~ll~~~~l~~-~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 273 KRQSIA-GSTHGGRADLQEALDFAAEGKVKP-MIETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred CCCEEE-EeccCCHHHHHHHHHHHHcCCCcc-eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 111221 122234678899999999999875 4568999999999999999999999875
No 110
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=2.7e-32 Score=256.36 Aligned_cols=299 Identities=22% Similarity=0.269 Sum_probs=224.3
Q ss_pred ceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhc-cCCcchhhhhhcccccCCCCCCCCCccccCceeEEEEecCCC
Q psy9949 39 DELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLG-GYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPR 117 (383)
Q Consensus 39 ~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~Vv~vG~~ 117 (383)
+++.++ +.+.|+++++||+||+.++++|++|+...+ |... .....+|.++|+|++|+|+++|++
T Consensus 7 ~~~~~~-~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~--------------~~~~~~p~~~g~e~~G~v~~vG~~ 71 (339)
T cd08232 7 GDLRVE-ERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFG--------------TVRLREPMVLGHEVSGVVEAVGPG 71 (339)
T ss_pred CceEEE-EcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCC--------------cccccCCeecCccceEEEEeeCCC
Confidence 457888 789999999999999999999999998763 3200 011235778999999999999999
Q ss_pred CCCCCCCCEEEEeec-----------------------------CCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHH
Q psy9949 118 VTDLNIDDVVYGVIQ-----------------------------PHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYT 168 (383)
Q Consensus 118 v~~~~~Gd~V~~~~~-----------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~ 168 (383)
+++|++||+|++... ...+|+|++|++++.+.++++|+++++++|+. ..+
T Consensus 72 v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~ 150 (339)
T cd08232 72 VTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEP 150 (339)
T ss_pred CCcCCCCCEEEEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cch
Confidence 999999999987210 01359999999999999999999999999876 567
Q ss_pred HHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHHhcCCCeeeeCCChHHHH
Q psy9949 169 GLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMH 246 (383)
Q Consensus 169 ~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~ 246 (383)
+++||+++.... . .++++|+|.| +|++|++++++|+.+|+ ++++++++ ++.++++++|++.++++++.++..
T Consensus 151 ~~~a~~~l~~~~-~----~~~~~VLI~g-~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~~~~ 224 (339)
T cd08232 151 LAVALHAVNRAG-D----LAGKRVLVTG-AGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDPLAA 224 (339)
T ss_pred HHHHHHHHHhcC-C----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCchhhhh
Confidence 789999986443 3 5789999977 79999999999999999 88888855 455778889999998887655332
Q ss_pred HHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccE
Q psy9949 247 SIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTI 326 (383)
Q Consensus 247 ~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (383)
.....+++|+++|++|+....... +++++ ++|+++.++... .. ..... ..+ ..++..+
T Consensus 225 ~~~~~~~vd~vld~~g~~~~~~~~-~~~L~--~~G~~v~~g~~~-~~-----~~~~~----~~~---------~~~~~~~ 282 (339)
T cd08232 225 YAADKGDFDVVFEASGAPAALASA-LRVVR--PGGTVVQVGMLG-GP-----VPLPL----NAL---------VAKELDL 282 (339)
T ss_pred hhccCCCccEEEECCCCHHHHHHH-HHHHh--cCCEEEEEecCC-CC-----ccCcH----HHH---------hhcceEE
Confidence 222234699999999864433332 88999 999999986321 00 00000 001 1111122
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 327 RWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 327 ~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
. +.. ...+.+++++++++++.+++ .+.++|+++++++|++.+.+++..||+|++.
T Consensus 283 ~-~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 283 R-GSF-RFDDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred E-EEe-cCHHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 1 111 23567899999999998864 4678899999999999999888889999874
No 111
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=100.00 E-value=6e-32 Score=251.86 Aligned_cols=317 Identities=26% Similarity=0.338 Sum_probs=245.3
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
|+++.+..++.+..+.++ +.+.|.+++++++||+.++++|++|+....+..+ ....+|.++|||
T Consensus 1 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~---------------~~~~~~~~~g~e 64 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLV-EVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYP---------------PPPGASDILGLE 64 (325)
T ss_pred CceEEEccCCCcccceEE-eCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC---------------CCCCCCCCccce
Confidence 678888877777777777 6677778999999999999999999988766411 112347899999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccC
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVY 186 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~ 186 (383)
++|+|+++|+++.++++||+|+++.. +|+|++|+.++.+.++++|+++++.+++.++.++.+||+++.+...+
T Consensus 65 ~~G~v~~vg~~~~~~~~Gd~V~~~~~---~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~---- 137 (325)
T TIGR02824 65 VAGEVVAVGEGVSRWKVGDRVCALVA---GGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGL---- 137 (325)
T ss_pred eEEEEEEeCCCCCCCCCCCEEEEccC---CCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCC----
Confidence 99999999999999999999999853 48999999999999999999999999999999999999998878888
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhc---CCCccEEEEcCC
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAG---AGPYDVILDAAG 262 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~---~~g~d~v~d~~g 262 (383)
+++++++|+|++|++|++++++++..|++|+++++++ +.+.++++|.+.+++....++...+.. ..++|++++++|
T Consensus 138 ~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~ 217 (325)
T TIGR02824 138 KAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVG 217 (325)
T ss_pred CCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCchhHHHHHHHHcCCCCeEEEEECCc
Confidence 8999999999999999999999999999999988654 556778889888887776666666553 246999999999
Q ss_pred CCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEc----CCHHHH
Q psy9949 263 IPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFM----PIPYAV 338 (383)
Q Consensus 263 ~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 338 (383)
+...... +++++ ++|+++.++....... . .. ...+.. ++..+.+......... ...+.+
T Consensus 218 ~~~~~~~--~~~l~--~~g~~v~~g~~~~~~~---~--~~----~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (325)
T TIGR02824 218 GSYLNRN--IKALA--LDGRIVQIGFQGGRKA---E--LD----LGPLLA----KRLTITGSTLRARPVAEKAAIAAELR 280 (325)
T ss_pred hHHHHHH--HHhhc--cCcEEEEEecCCCCcC---C--CC----hHHHHh----cCCEEEEEehhhcchhhhHHHHHHHH
Confidence 8655544 88999 9999999864211100 0 00 000101 1112221111000000 013456
Q ss_pred HHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 339 KEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 339 ~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
.+++++++++.+.+..++.+++++++++++.+.++...||+++++
T Consensus 281 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 281 EHVWPLLASGRVRPVIDKVFPLEDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred HHHHHHHHCCcccCccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence 778889999998877888899999999999999888889999875
No 112
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=4.1e-32 Score=259.10 Aligned_cols=311 Identities=18% Similarity=0.235 Sum_probs=226.1
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
+...++... .++++ +.|.|++++++|+||++++++|++|++...+..... . . +.....+|.++|||
T Consensus 29 ~~~~~~~~~----~~~~~-~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~---~-~-----~~~~~~~~~~~g~e 94 (384)
T cd08265 29 LGSKVWRYP----ELRVE-DVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGY---I-L-----YPGLTEFPVVIGHE 94 (384)
T ss_pred ceeEEEeCC----CEEEE-ECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcc---c-c-----cCcccCCCcccccc
Confidence 444455432 37888 899999999999999999999999998876320000 0 0 00113467899999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeec------------------------CCCCCCceEEEeecCcccccCCCC------
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQ------------------------PHKQGSFSKLILADSALVHKKPSN------ 156 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~------------------------~~~~g~~a~~~~v~~~~~~~ip~~------ 156 (383)
++|+|+++|++++.|++||+|++... ...+|+|++|+.++.+.++++|++
T Consensus 95 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~ 174 (384)
T cd08265 95 FSGVVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSE 174 (384)
T ss_pred eEEEEEEECCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCcccccccc
Confidence 99999999999999999999986110 012599999999999999999986
Q ss_pred -CCHHHHHhhhHHHHHHHHHHHHh-hhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHHhcC
Q psy9949 157 -ISDEEAAGVLYTGLTAWSALQIT-AALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVTSLN 232 (383)
Q Consensus 157 -~~~~~aa~l~~~~~tA~~~l~~~-~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~~lg 232 (383)
++.+ +++++.++++||+++... .++ +++++|+|+| +|++|++++++|+.+|+ +|++++++ ++.++++++|
T Consensus 175 ~~~~~-~a~~~~~~~ta~~al~~~~~~~----~~g~~VlV~g-~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g 248 (384)
T cd08265 175 DKAFE-AGALVEPTSVAYNGLFIRGGGF----RPGAYVVVYG-AGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMG 248 (384)
T ss_pred CCCHH-HhhhhhHHHHHHHHHHhhcCCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcC
Confidence 3455 556667888999998655 677 8999999996 79999999999999999 79888854 4667889999
Q ss_pred CCeeeeCCCh---HHHHHHhc---CCCccEEEEcCCCCc-c-cccccccccccCCCceEEEecCCCccCCCCCCCchhhh
Q psy9949 233 PNLVIDYNEP---EAMHSIAG---AGPYDVILDAAGIPL-D-QINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLV 304 (383)
Q Consensus 233 ~~~v~~~~~~---~~~~~i~~---~~g~d~v~d~~g~~~-~-~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~ 304 (383)
++.++++++. ++.+.+.+ ..++|+++|++|+.. . ... +++++ ++|+++.+|.... ...
T Consensus 249 ~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~--~~~l~--~~G~~v~~g~~~~----~~~------ 314 (384)
T cd08265 249 ADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQM--EKSIA--INGKIVYIGRAAT----TVP------ 314 (384)
T ss_pred CCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHH--HHHHH--cCCEEEEECCCCC----CCc------
Confidence 9988887643 55555543 347999999999742 2 333 78999 9999999864211 000
Q ss_pred hhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcCCCCCeEEE
Q psy9949 305 KNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQGHLRGKIIL 381 (383)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~~~~gkvvl 381 (383)
+..... ..++..+...........+.+++++++++.+++ ++.+.|+++++++|++.+.++ ..||+|+
T Consensus 315 ---~~~~~~------~~~~~~l~~~~~~~~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv 383 (384)
T cd08265 315 ---LHLEVL------QVRRAQIVGAQGHSGHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI 383 (384)
T ss_pred ---ccHHHH------hhCceEEEEeeccCCcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence 000000 111111111111123457899999999999876 367889999999999997654 5789886
No 113
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=4.3e-32 Score=254.44 Aligned_cols=325 Identities=26% Similarity=0.324 Sum_probs=241.9
Q ss_pred eeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCce
Q psy9949 28 AAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDF 107 (383)
Q Consensus 28 ~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~ 107 (383)
|++++...+.+..+.++ +.+.|++.+++|+||+.++++|++|+....|..+ ....+|..+|||+
T Consensus 1 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~---------------~~~~~~~~~g~e~ 64 (337)
T cd08275 1 RAVVLTGFGGLDKLKVE-KEALPEPSSGEVRVRVEACGLNFADLMARQGLYD---------------SAPKPPFVPGFEC 64 (337)
T ss_pred CeEEEcCCCCccceEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCC---------------CCCCCCCCCccee
Confidence 46667766666678887 6777889999999999999999999998876511 1234577899999
Q ss_pred eEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCC
Q psy9949 108 CGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYP 187 (383)
Q Consensus 108 ~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~ 187 (383)
+|+|+.+|+++.++++||+|+++.. +|+|++|+.++.+.++++|+++++++++.++++..+||+++....++ +
T Consensus 65 ~G~v~~~g~~~~~~~~G~~V~~~~~---~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~----~ 137 (337)
T cd08275 65 AGTVEAVGEGVKDFKVGDRVMGLTR---FGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNL----R 137 (337)
T ss_pred EEEEEEECCCCcCCCCCCEEEEecC---CCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCC----C
Confidence 9999999999999999999999863 48999999999999999999999999999999999999999878888 8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcC--CCccEEEEcCCCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGA--GPYDVILDAAGIP 264 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~--~g~d~v~d~~g~~ 264 (383)
++++|+|+|++|++|++++++|+.. +..++...++++.+.+.++|.+.+++....++.+.+... .++|+++|++|+.
T Consensus 138 ~~~~vli~g~~g~~g~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~ 217 (337)
T cd08275 138 PGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGTASASKHEALKENGVTHVIDYRTQDYVEEVKKISPEGVDIVLDALGGE 217 (337)
T ss_pred CCCEEEEEcCcchHHHHHHHHHHHccCcEEEEeCCHHHHHHHHHcCCcEEeeCCCCcHHHHHHHHhCCCceEEEECCcHH
Confidence 9999999998899999999999998 333332223235677788999888888777776666532 5799999999987
Q ss_pred cccccccccccccCCCceEEEecCCCccCCCCCCCch--hhhhhHHHHhhhhhccccccCCccEEEEEE----c---CCH
Q psy9949 265 LDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVP--GLVKNAFDLLKSNFESGELCKTNTIRWGFF----M---PIP 335 (383)
Q Consensus 265 ~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~ 335 (383)
..... +++++ ++|+++.+|.....+........ ......+.+... ....++..+..... . ...
T Consensus 218 ~~~~~--~~~l~--~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (337)
T cd08275 218 DTRKS--YDLLK--PMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPM----KLISENKSVLGFNLGWLFEERELLT 289 (337)
T ss_pred HHHHH--HHhhc--cCcEEEEEeecCCcCcccccccccccccccccccCHH----HHhhcCceEEEeechhhhhChHHHH
Confidence 65444 88999 99999998753322111100000 000000000000 00111111111110 0 112
Q ss_pred HHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 336 YAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 336 ~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
..+.+++++++++.+.+...+.|++++++++++.+.+++..||+++++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 290 EVMDKLLKLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred HHHHHHHHHHHCCCCCCceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 457888999999998877778999999999999999888889999875
No 114
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=3.5e-32 Score=252.49 Aligned_cols=298 Identities=19% Similarity=0.175 Sum_probs=225.5
Q ss_pred ceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHh-ccCCcchhhhhhcccccCCCCCCCCCccccCceeEEEEecCCC
Q psy9949 39 DELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAML-GGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPR 117 (383)
Q Consensus 39 ~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~Vv~vG~~ 117 (383)
++++++ +++.|++.++||+||+.++++|++|+... .|... ......|.++|+|++|+|+++|++
T Consensus 5 ~~~~~~-~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~--------------~~~~~~~~~~g~e~~G~V~~vG~~ 69 (312)
T cd08269 5 GRFEVE-EHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPW--------------FVYPAEPGGPGHEGWGRVVALGPG 69 (312)
T ss_pred CeeEEE-ECCCCCCCCCeEEEEEEEeeecccchHHHccCCCC--------------cccCCCCcccceeeEEEEEEECCC
Confidence 357888 78999999999999999999999999887 55410 011234788999999999999999
Q ss_pred CCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcC
Q psy9949 118 VTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGA 197 (383)
Q Consensus 118 v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga 197 (383)
++++++||+|+++. .|+|++|+.++.+.++++|+++ ..++....++.+|++++. ..++ +++++|+|+|
T Consensus 70 v~~~~~Gd~V~~~~----~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~~~~----~~~~~vlI~g- 137 (312)
T cd08269 70 VRGLAVGDRVAGLS----GGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-RGWI----RAGKTVAVIG- 137 (312)
T ss_pred CcCCCCCCEEEEec----CCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-hcCC----CCCCEEEEEC-
Confidence 99999999999986 3999999999999999999998 233332367788999987 7787 8999999997
Q ss_pred CchHHHHHHHHHHHCCCE-EEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhcC---CCccEEEEcCCCCcccccccc
Q psy9949 198 SGGVGTMAVQLLKAWDIE-VVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVILDAAGIPLDQINSYL 272 (383)
Q Consensus 198 ~g~vG~~ai~la~~~G~~-Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~ 272 (383)
+|++|++++++|+.+|++ |+++.+++ +.++++++|++.+++++..++.+.+.+. .++|+++||+|+....... +
T Consensus 138 ~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~-~ 216 (312)
T cd08269 138 AGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLA-G 216 (312)
T ss_pred CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHH-H
Confidence 799999999999999998 98888654 5677888999888887776777766543 4799999999876443332 8
Q ss_pred cccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc
Q psy9949 273 PFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP 352 (383)
Q Consensus 273 ~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~ 352 (383)
++++ ++|+++.++... .. ...+ ....+.+....+ .+... .......+.+++++++++++.+++
T Consensus 217 ~~l~--~~g~~~~~g~~~-~~--~~~~----~~~~~~~~~~~~------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~ 279 (312)
T cd08269 217 ELVA--ERGRLVIFGYHQ-DG--PRPV----PFQTWNWKGIDL------INAVE--RDPRIGLEGMREAVKLIADGRLDL 279 (312)
T ss_pred HHhc--cCCEEEEEccCC-CC--Cccc----CHHHHhhcCCEE------EEecc--cCccchhhHHHHHHHHHHcCCCCc
Confidence 8999 999999986432 00 0000 001111111111 11000 001112578999999999999876
Q ss_pred --ccceeecCCCHHHHHHHHhcCCC-CCeEEE
Q psy9949 353 --VIDSKYNFCELPTAFEKVQQGHL-RGKIIL 381 (383)
Q Consensus 353 --~~~~~~~l~~~~~a~~~l~~~~~-~gkvvl 381 (383)
.+.+.|++++++++++.+.+++. .+|+++
T Consensus 280 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 280 GSLLTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred hhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 45778999999999999988865 478876
No 115
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=9e-32 Score=251.00 Aligned_cols=320 Identities=24% Similarity=0.280 Sum_probs=245.4
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
||++++...+.+..++++ +.+.|.+.+++++|+|.++++|+.|+....|... ....+|.++|||
T Consensus 1 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~---------------~~~~~~~~~g~e 64 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIE-ELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYI---------------EPPPLPARLGYE 64 (328)
T ss_pred CeEEEEeccCCcceeEEe-ecCCCCCCCCeEEEEEEEEecChHHhheeccccC---------------CCCCCCCCCCcc
Confidence 688899887777778888 7888889999999999999999999988766411 113447789999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeec--CCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCc
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQ--PHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGL 184 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~--~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~ 184 (383)
++|+|+.+|+++.++++||+|+++.. ....|++++|+.++.+.++++|+++++++++.+++.+.+||+++.....+
T Consensus 65 ~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~-- 142 (328)
T cd08268 65 AAGVVEAVGAGVTGFAVGDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGL-- 142 (328)
T ss_pred eEEEEEeeCCCCCcCCCCCEEEeccccccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCC--
Confidence 99999999999999999999998742 12348999999999999999999999999999999999999999877887
Q ss_pred cCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcC---CCccEEEEc
Q psy9949 185 VYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVILDA 260 (383)
Q Consensus 185 ~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v~d~ 260 (383)
+++++++|+|++|++|++++++++..|+++++++++ ++.+.++++|.+.+++.+..++...+.+. .++|+++++
T Consensus 143 --~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 220 (328)
T cd08268 143 --RPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDP 220 (328)
T ss_pred --CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHhCCCCceEEEEC
Confidence 889999999999999999999999999999999855 45667778888888887776666655432 379999999
Q ss_pred CCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEE--cCCHHHH
Q psy9949 261 AGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFF--MPIPYAV 338 (383)
Q Consensus 261 ~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 338 (383)
+|+...... +++++ ++|+++.++...... . .+. ....+ . +...+.+........ ....+.+
T Consensus 221 ~~~~~~~~~--~~~l~--~~g~~v~~g~~~~~~-~--~~~-----~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~ 283 (328)
T cd08268 221 VGGPQFAKL--ADALA--PGGTLVVYGALSGEP-T--PFP-----LKAAL-K----KSLTFRGYSLDEITLDPEARRRAI 283 (328)
T ss_pred CchHhHHHH--HHhhc--cCCEEEEEEeCCCCC-C--CCc-----hHHHh-h----cCCEEEEEecccccCCHHHHHHHH
Confidence 998655555 88999 999999886432110 0 000 00000 0 011111111000000 0113456
Q ss_pred HHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 339 KEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 339 ~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
+.+.+++.++.+.+...+.|++++++++++.+.+++..||++++.
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 328 (328)
T cd08268 284 AFILDGLASGALKPVVDRVFPFDDIVEAHRYLESGQQIGKIVVTP 328 (328)
T ss_pred HHHHHHHHCCCCcCCcccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 666777888888777778899999999999999888889999863
No 116
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=4.4e-32 Score=255.04 Aligned_cols=305 Identities=22% Similarity=0.300 Sum_probs=226.5
Q ss_pred eecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCceeEEEE
Q psy9949 33 SSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIV 112 (383)
Q Consensus 33 ~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~Vv 112 (383)
++++.+ ++++ +.|.|+++++||+||+.++++|++|+.+..+... . .....+|.++|+|++|+|+
T Consensus 5 ~~~~~~--~~l~-~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~------~-------~~~~~~~~~~g~e~~G~V~ 68 (340)
T TIGR00692 5 TKPGYG--AELT-EVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEW------A-------QSRIKPPQVVGHEVAGEVV 68 (340)
T ss_pred ccCCCC--cEEE-ECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCC------C-------CCCCCCCcccccceEEEEE
Confidence 355655 6777 7899999999999999999999999987755310 0 0112356789999999999
Q ss_pred ecCCCCCCCCCCCEEEEeec------------------------CCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHH
Q psy9949 113 AKGPRVTDLNIDDVVYGVIQ------------------------PHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYT 168 (383)
Q Consensus 113 ~vG~~v~~~~~Gd~V~~~~~------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~ 168 (383)
++|+++++|++||+|++... ....|+|++|++++.+.++++|++++.+++ +++..
T Consensus 69 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~ 147 (340)
T TIGR00692 69 GIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEP 147 (340)
T ss_pred EECCCCCcCCCCCEEEECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhh-hhcch
Confidence 99999999999999987310 113589999999999999999999998655 56677
Q ss_pred HHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecC-chHHHHHhcCCCeeeeCCChHHHH
Q psy9949 169 GLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMH 246 (383)
Q Consensus 169 ~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~ 246 (383)
+.+|++++. ..+ +++++|+|.| +|++|++++++|+.+|++ |+++.++ ++.++++++|++.++++...++.+
T Consensus 148 ~~~a~~~~~--~~~----~~g~~vlI~~-~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~ 220 (340)
T TIGR00692 148 LGNAVHTVL--AGP----ISGKSVLVTG-AGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVK 220 (340)
T ss_pred HHHHHHHHH--ccC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccccCHHH
Confidence 888998863 345 7899999976 799999999999999996 8888544 356777889998888887777777
Q ss_pred HHhc---CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCC
Q psy9949 247 SIAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKT 323 (383)
Q Consensus 247 ~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (383)
.+.+ ..++|+++|++|+....... +++++ ++|+++.+|.... .... . ....+ ..++
T Consensus 221 ~l~~~~~~~~~d~vld~~g~~~~~~~~-~~~l~--~~g~~v~~g~~~~----~~~~--~-~~~~~-----------~~~~ 279 (340)
T TIGR00692 221 EVADLTDGEGVDVFLEMSGAPKALEQG-LQAVT--PGGRVSLLGLPPG----KVTI--D-FTNKV-----------IFKG 279 (340)
T ss_pred HHHHhcCCCCCCEEEECCCCHHHHHHH-HHhhc--CCCEEEEEccCCC----Cccc--c-hhhhh-----------hhcc
Confidence 6654 34799999998875443332 88999 9999999864310 0000 0 00011 1111
Q ss_pred ccEEEEEEcCCHHHHHHHHHHHHcCCcc--cccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 324 NTIRWGFFMPIPYAVKEINKFIERGQIK--PVIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
..+.........+.+.++++++++++++ +.+.+.++++++.++++.+.+++. ||+|+++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-gkvvv~~ 340 (340)
T TIGR00692 280 LTIYGITGRHMFETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQT-GKVILSL 340 (340)
T ss_pred eEEEEEecCCchhhHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCC-ceEEEeC
Confidence 1111111112345678899999999986 457889999999999999988874 9999874
No 117
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=100.00 E-value=6.4e-32 Score=249.30 Aligned_cols=298 Identities=24% Similarity=0.307 Sum_probs=230.2
Q ss_pred CCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCceeEEEEecCCCCCCCCCCCEEE
Q psy9949 49 TPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVY 128 (383)
Q Consensus 49 ~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~ 128 (383)
.|++.+++++||+.++++|++|+....|..+ ....+|.++|+|++|+|+++|+++.+|++||+|+
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~---------------~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~ 66 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYP---------------TMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVI 66 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCC---------------CCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEE
Confidence 5778999999999999999999998877511 1124578999999999999999999999999999
Q ss_pred EeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHH
Q psy9949 129 GVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQL 208 (383)
Q Consensus 129 ~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~l 208 (383)
++.. ..+|+|++|++++.+.++++|+++++++++.++..+++||+++. ...+ +++++|+|++++|++|++++++
T Consensus 67 ~~~~-~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~----~~g~~vli~~~~~~~g~~~~~~ 140 (303)
T cd08251 67 AGTG-ESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFA-RAGL----AKGEHILIQTATGGTGLMAVQL 140 (303)
T ss_pred EecC-CCCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHH-hcCC----CCCCEEEEecCCcHHHHHHHHH
Confidence 8863 23589999999999999999999999999999999999999985 7777 9999999999999999999999
Q ss_pred HHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhc---CCCccEEEEcCCCCcccccccccccccCCCceEE
Q psy9949 209 LKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFV 284 (383)
Q Consensus 209 a~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v 284 (383)
++.+|++|++++++ ++.+.++++|++.+++....++.+.+.. ..++|+++|++++...... +++++ ++|+++
T Consensus 141 a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~--~~~l~--~~g~~v 216 (303)
T cd08251 141 ARLKGAEIYATASSDDKLEYLKQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGEAIQKG--LNCLA--PGGRYV 216 (303)
T ss_pred HHHcCCEEEEEcCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHHHHHHH--HHHhc--cCcEEE
Confidence 99999999999865 4567778899999998877777666653 3479999999987655555 88999 999999
Q ss_pred EecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHH
Q psy9949 285 TLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELP 364 (383)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~ 364 (383)
.++........... ......+..+.. ..+.+... .......+.+.++.++++++.+++...+.|++++++
T Consensus 217 ~~~~~~~~~~~~~~--~~~~~~~~~~~~------~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 286 (303)
T cd08251 217 EIAMTALKSAPSVD--LSVLSNNQSFHS------VDLRKLLL--LDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIG 286 (303)
T ss_pred EEeccCCCccCccC--hhHhhcCceEEE------EehHHhhh--hCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHHHH
Confidence 88643211110000 000000000000 00000000 000012456788999999999988788899999999
Q ss_pred HHHHHHhcCCCCCeEEE
Q psy9949 365 TAFEKVQQGHLRGKIIL 381 (383)
Q Consensus 365 ~a~~~l~~~~~~gkvvl 381 (383)
++++.+.+++..||+++
T Consensus 287 ~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 287 EAYRYLSDRENIGKVVV 303 (303)
T ss_pred HHHHHHHhCCCcceEeC
Confidence 99999999888889874
No 118
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=100.00 E-value=1.2e-30 Score=242.83 Aligned_cols=313 Identities=26% Similarity=0.349 Sum_probs=242.4
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCC-CCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILK-SKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR 105 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~-~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~ 105 (383)
|+|+++..++.+..+.+. +.+ |.+. +++++|++.++++|++|+....|... .....|..+||
T Consensus 1 ~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~---------------~~~~~~~~~g~ 63 (323)
T cd08241 1 MKAVVCKELGGPEDLVLE-EVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQ---------------VKPPLPFVPGS 63 (323)
T ss_pred CeEEEEecCCCcceeEEe-cCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCC---------------CCCCCCCcccc
Confidence 688888877777778887 667 7666 59999999999999999998876511 11234678999
Q ss_pred ceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCcc
Q psy9949 106 DFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLV 185 (383)
Q Consensus 106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~ 185 (383)
|++|+|+.+|+++..+++||+|+++.. .|++++|+.++.+.++++|+++++.+++.+...+.+||+++.+...+
T Consensus 64 e~~G~v~~~g~~~~~~~~G~~V~~~~~---~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~--- 137 (323)
T cd08241 64 EVAGVVEAVGEGVTGFKVGDRVVALTG---QGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARL--- 137 (323)
T ss_pred eeEEEEEEeCCCCCCCCCCCEEEEecC---CceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCC---
Confidence 999999999999999999999999862 38999999999999999999999999999999999999999877887
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcC---CCccEEEEcC
Q psy9949 186 YPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVILDAA 261 (383)
Q Consensus 186 ~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v~d~~ 261 (383)
+++++|+|+|++|++|++++++|+..|++|++++++ ++.+.++++|++.+++....++.+.+... .++|.+++++
T Consensus 138 -~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~ 216 (323)
T cd08241 138 -QPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPV 216 (323)
T ss_pred -CCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHHHcCCceeeecCCccHHHHHHHHcCCCCcEEEEECc
Confidence 899999999988999999999999999999999855 45677788898888887776666666542 4799999999
Q ss_pred CCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEc-----CCHH
Q psy9949 262 GIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFM-----PIPY 336 (383)
Q Consensus 262 g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 336 (383)
|+...... +++++ ++|+++.++...... ...... ..... .....+... .... ...+
T Consensus 217 g~~~~~~~--~~~~~--~~g~~v~~~~~~~~~--------~~~~~~-~~~~~----~~~~~~~~~--~~~~~~~~~~~~~ 277 (323)
T cd08241 217 GGDVFEAS--LRSLA--WGGRLLVIGFASGEI--------PQIPAN-LLLLK----NISVVGVYW--GAYARREPELLRA 277 (323)
T ss_pred cHHHHHHH--HHhhc--cCCEEEEEccCCCCc--------CcCCHH-HHhhc----CcEEEEEec--ccccchhHHHHHH
Confidence 98554444 88999 999999885321000 000000 00011 111111110 0000 0236
Q ss_pred HHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949 337 AVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382 (383)
Q Consensus 337 ~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~ 382 (383)
.+.+++++++++.+.+...+.|+++++.++++.+.++...||++++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 278 NLAELFDLLAEGKIRPHVSAVFPLEQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred HHHHHHHHHHCCCcccccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence 7788999999999887788899999999999999888888898874
No 119
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=9.9e-31 Score=242.09 Aligned_cols=275 Identities=22% Similarity=0.297 Sum_probs=212.9
Q ss_pred eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949 27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106 (383)
Q Consensus 27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 106 (383)
||+++..+.+ +..++++ +++.|++.+++|+||+.++++|++|+....|.. .....|.++|+|
T Consensus 1 ~~~~~~~~~~-~~~~~~~-~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~----------------~~~~~p~~~G~e 62 (306)
T cd08258 1 MKALVKTGPG-PGNVELR-EVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDY----------------DPVETPVVLGHE 62 (306)
T ss_pred CeeEEEecCC-CCceEEe-ecCCCCCCCCeEEEEEEEEEechhhHHHHcCCC----------------CcCCCCeeeccc
Confidence 5788887643 4568898 899999999999999999999999998887751 123457889999
Q ss_pred eeEEEEecCCCCCCCCCCCEEEEeec-------------------------CCCCCCceEEEeecCcccccCCCCCCHHH
Q psy9949 107 FCGKIVAKGPRVTDLNIDDVVYGVIQ-------------------------PHKQGSFSKLILADSALVHKKPSNISDEE 161 (383)
Q Consensus 107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~-------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~ 161 (383)
++|+|+++|++++.|++||+|+++.. ....|+|++|++++.+.++++|+++++++
T Consensus 63 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~ 142 (306)
T cd08258 63 FSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEA 142 (306)
T ss_pred eEEEEEEECCCcCcCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHH
Confidence 99999999999999999999988642 01248999999999999999999999998
Q ss_pred HHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCc--hHHHHHhcCCCeeee
Q psy9949 162 AAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGD--AKDLVTSLNPNLVID 238 (383)
Q Consensus 162 aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~--~~~~~~~lg~~~v~~ 238 (383)
++ ++..+++||+++...+++ +++++|+|.| +|++|++++++|+.+|++|+++. +++ +.++++++|++.+ +
T Consensus 143 aa-~~~~~~~a~~~l~~~~~~----~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~~~g~~~~-~ 215 (306)
T cd08258 143 AA-LTEPLAVAVHAVAERSGI----RPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADAV-N 215 (306)
T ss_pred HH-hhchHHHHHHHHHHhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHhCCccc-C
Confidence 87 667888999999878888 8999999976 89999999999999999988874 222 4567788999888 8
Q ss_pred CCChHHHHHHhc---CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhh
Q psy9949 239 YNEPEAMHSIAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNF 315 (383)
Q Consensus 239 ~~~~~~~~~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (383)
+...++.+.+.. ..++|+++|++|+....... +++++ ++|+++.++... .. ...+....
T Consensus 216 ~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~-~~~l~--~~G~~v~~g~~~-~~-------------~~~~~~~~- 277 (306)
T cd08258 216 GGEEDLAELVNEITDGDGADVVIECSGAVPALEQA-LELLR--KGGRIVQVGIFG-PL-------------AASIDVER- 277 (306)
T ss_pred CCcCCHHHHHHHHcCCCCCCEEEECCCChHHHHHH-HHHhh--cCCEEEEEcccC-CC-------------CcccCHHH-
Confidence 777777766654 24799999999865443332 88999 999999986531 00 00111011
Q ss_pred ccccccCCccEEEEEEcCCHHHHHHHHHHHHcC
Q psy9949 316 ESGELCKTNTIRWGFFMPIPYAVKEINKFIERG 348 (383)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 348 (383)
+..++..++ +....+.+++++++++++.|
T Consensus 278 ---~~~~~~~i~-g~~~~~~~~~~~~~~~~~~~ 306 (306)
T cd08258 278 ---IIQKELSVI-GSRSSTPASWETALRLLASG 306 (306)
T ss_pred ---HhhcCcEEE-EEecCchHhHHHHHHHHhcC
Confidence 122333433 34445688899999999875
No 120
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.97 E-value=3.1e-30 Score=236.23 Aligned_cols=287 Identities=26% Similarity=0.302 Sum_probs=222.7
Q ss_pred CeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCceeEEEEecCCCCCCCCCCCEEEEeecCC
Q psy9949 55 KDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPH 134 (383)
Q Consensus 55 ~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~ 134 (383)
+||+||+.++++|++|++...|. . ..+|.++|||++|+|+++|+++.++++||+|+++.
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~----------------~--~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~--- 59 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGL----------------L--PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA--- 59 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCC----------------C--CCCCCccceeeeEEEEeecCCccCCCCCCEEEEEe---
Confidence 58999999999999999988764 1 23467899999999999999999999999999986
Q ss_pred CCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC
Q psy9949 135 KQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI 214 (383)
Q Consensus 135 ~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~ 214 (383)
.|+|++|+.++.+.++++|+++++.+++.+++++.+||+++.+...+ +++++|+|+|++|++|++++++|+.+|+
T Consensus 60 -~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~----~~g~~vlv~g~~g~~g~~~~~~a~~~g~ 134 (293)
T cd05195 60 -PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARL----QKGESVLIHAAAGGVGQAAIQLAQHLGA 134 (293)
T ss_pred -cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhcc----CCCCEEEEecCCCHHHHHHHHHHHHcCC
Confidence 49999999999999999999999999999999999999999877888 9999999999999999999999999999
Q ss_pred EEEEEecC-chHHHHHhcC--CCeeeeCCChHHHHHHhc---CCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949 215 EVVTTCSG-DAKDLVTSLN--PNLVIDYNEPEAMHSIAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS 288 (383)
Q Consensus 215 ~Vi~~~~~-~~~~~~~~lg--~~~v~~~~~~~~~~~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~ 288 (383)
+|++++++ ++.+.+++++ ++.++++...++.+++.+ ..++|+++|++|+...... +++++ ++|+++.++.
T Consensus 135 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~--~~~l~--~~g~~v~~g~ 210 (293)
T cd05195 135 EVFATVGSEEKREFLRELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGELLRAS--WRCLA--PFGRFVEIGK 210 (293)
T ss_pred EEEEEeCCHHHHHHHHHhCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCchHHHHH--HHhcc--cCceEEEeec
Confidence 99999866 4567777777 677888877777776654 2479999999998854544 89999 9999998864
Q ss_pred CCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHH
Q psy9949 289 PFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFE 368 (383)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~ 368 (383)
....+.. ............+. ...+.+... .......+.+.++.++++++++.+...+.+++++++++++
T Consensus 211 ~~~~~~~--~~~~~~~~~~~~~~------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 280 (293)
T cd05195 211 RDILSNS--KLGMRPFLRNVSFS------SVDLDQLAR--ERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFR 280 (293)
T ss_pred cccccCC--ccchhhhccCCeEE------EEeHHHHhh--hChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHH
Confidence 3211100 00000000000000 000000000 0001124567889999999999888888899999999999
Q ss_pred HHhcCCCCCeEEE
Q psy9949 369 KVQQGHLRGKIIL 381 (383)
Q Consensus 369 ~l~~~~~~gkvvl 381 (383)
.+.+++..||+++
T Consensus 281 ~~~~~~~~~~ivv 293 (293)
T cd05195 281 LMQSGKHIGKVVL 293 (293)
T ss_pred HHhcCCCCceecC
Confidence 9998888888874
No 121
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.97 E-value=3.4e-29 Score=229.02 Aligned_cols=279 Identities=27% Similarity=0.357 Sum_probs=216.2
Q ss_pred EEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCceeEEEEecCCCCCCCCCCCEEEEeecCCCCCC
Q psy9949 59 VEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGS 138 (383)
Q Consensus 59 Vkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~ 138 (383)
||+.++++|++|++...|. ...|.++|||++|+|+++|++++.|++||+|+++. .|+
T Consensus 2 i~v~~~~i~~~d~~~~~g~-------------------~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~----~g~ 58 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGL-------------------LPGEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA----PGS 58 (288)
T ss_pred eeEEEEecCHHHHHHhcCC-------------------CCCCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc----CCc
Confidence 8999999999999988765 11357899999999999999999999999999986 399
Q ss_pred ceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEE
Q psy9949 139 FSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVT 218 (383)
Q Consensus 139 ~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~ 218 (383)
|++|+.++.+.++++|+++++++++.+++.+.++|+++.+...+ +++++|+|+|++|++|++++++|+..|++|++
T Consensus 59 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~----~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~ 134 (288)
T smart00829 59 FATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARL----RPGESVLIHAAAGGVGQAAIQLAQHLGAEVFA 134 (288)
T ss_pred eeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCC----CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEE
Confidence 99999999999999999999999999999999999999777888 89999999999999999999999999999999
Q ss_pred EecC-chHHHHHhcCC--CeeeeCCChHHHHHHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCcc
Q psy9949 219 TCSG-DAKDLVTSLNP--NLVIDYNEPEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLK 292 (383)
Q Consensus 219 ~~~~-~~~~~~~~lg~--~~v~~~~~~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~ 292 (383)
++++ ++.+.++++|+ +.++++...++.+++.+. .++|+++|++|+...... +++++ ++|+++.++.....
T Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~--~~~l~--~~g~~v~~g~~~~~ 210 (288)
T smart00829 135 TAGSPEKRDFLRELGIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGEFLDAS--LRCLA--PGGRFVEIGKRDIR 210 (288)
T ss_pred EeCCHHHHHHHHHcCCChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHHHHHHH--HHhcc--CCcEEEEEcCcCCc
Confidence 9954 56777888998 678887776676666542 469999999997554444 88999 99999998643211
Q ss_pred CCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEc--CCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHH
Q psy9949 293 NTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFM--PIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKV 370 (383)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l 370 (383)
+... ++... +.+....++..+...... ...+.+.+++++++++++.+...+.|++++++++++.+
T Consensus 211 ~~~~-----------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (288)
T smart00829 211 DNSQ-----------LGMAP--FRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYM 277 (288)
T ss_pred cccc-----------cchhh--hcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHH
Confidence 1000 00000 000111111000000000 12346788889999998877667789999999999999
Q ss_pred hcCCCCCeEEE
Q psy9949 371 QQGHLRGKIIL 381 (383)
Q Consensus 371 ~~~~~~gkvvl 381 (383)
..++..||+++
T Consensus 278 ~~~~~~~~ivv 288 (288)
T smart00829 278 QQGKHIGKVVL 288 (288)
T ss_pred hcCCCcceEeC
Confidence 98887788774
No 122
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=99.97 E-value=1.2e-29 Score=231.85 Aligned_cols=233 Identities=20% Similarity=0.241 Sum_probs=174.9
Q ss_pred cccCceeEEEEecCCCCC------CCCCCCEEEEeec------------------C-------------CCCCCceEEEe
Q psy9949 102 TLGRDFCGKIVAKGPRVT------DLNIDDVVYGVIQ------------------P-------------HKQGSFSKLIL 144 (383)
Q Consensus 102 ~~G~e~~G~Vv~vG~~v~------~~~~Gd~V~~~~~------------------~-------------~~~g~~a~~~~ 144 (383)
++|||++|+|+++|++|+ +|++||||+.... . ..+|+|+||++
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~ 80 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH 80 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence 479999999999999999 8999999975311 0 12599999999
Q ss_pred ecCc-ccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEec-
Q psy9949 145 ADSA-LVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTCS- 221 (383)
Q Consensus 145 v~~~-~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~- 221 (383)
+|.+ .++++|+++++++++++++.+.|||+++. .... .++++|+|+| +|++|++++|+|+.+|++ |+++.+
T Consensus 81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~-~~~~----~~g~~VlV~G-~G~vG~~~~~~ak~~G~~~Vi~~~~~ 154 (280)
T TIGR03366 81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALE-AAGD----LKGRRVLVVG-AGMLGLTAAAAAAAAGAARVVAADPS 154 (280)
T ss_pred ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHH-hccC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 9997 79999999999999999999999999997 4445 7899999998 699999999999999995 888874
Q ss_pred CchHHHHHhcCCCeeeeCCChHHHHHHh---cCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCC
Q psy9949 222 GDAKDLVTSLNPNLVIDYNEPEAMHSIA---GAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLG 298 (383)
Q Consensus 222 ~~~~~~~~~lg~~~v~~~~~~~~~~~i~---~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~ 298 (383)
+++.++++++|++.++++.+. .+.+. ...++|++||++|++.....+ +++++ ++|+++.+|.....
T Consensus 155 ~~r~~~a~~~Ga~~~i~~~~~--~~~~~~~~~~~g~d~vid~~G~~~~~~~~-~~~l~--~~G~iv~~G~~~~~------ 223 (280)
T TIGR03366 155 PDRRELALSFGATALAEPEVL--AERQGGLQNGRGVDVALEFSGATAAVRAC-LESLD--VGGTAVLAGSVFPG------ 223 (280)
T ss_pred HHHHHHHHHcCCcEecCchhh--HHHHHHHhCCCCCCEEEECCCChHHHHHH-HHHhc--CCCEEEEeccCCCC------
Confidence 456789999999988876542 23332 234799999999987654443 88999 99999998642100
Q ss_pred CchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcC--Cc--ccccceeecCCCH
Q psy9949 299 LVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERG--QI--KPVIDSKYNFCEL 363 (383)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~l--~~~~~~~~~l~~~ 363 (383)
. ..++....+ ..++..+ .+....+.+++++++++++++ ++ +.+++++|||+++
T Consensus 224 ---~----~~~i~~~~~----~~~~~~i-~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 224 ---G----PVALDPEQV----VRRWLTI-RGVHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred ---C----ceeeCHHHH----HhCCcEE-EecCCCCHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 0 001111111 1122222 233344578899999999974 43 3578999999874
No 123
>KOG1202|consensus
Probab=99.96 E-value=6.2e-30 Score=251.79 Aligned_cols=303 Identities=18% Similarity=0.247 Sum_probs=244.0
Q ss_pred CCCceeEeeccccCC---CCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCceeEEEE
Q psy9949 36 GGADELQFNDNVKTP---ILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIV 112 (383)
Q Consensus 36 g~~~~l~~~~~~~~p---~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~Vv 112 (383)
|+...|+|. +.|.. +..++.=+.-|.|+.||..|++...|+-+ ...+| ..-....+++|-|++|+
T Consensus 1424 GDlsSlrWi-es~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~-----~DAiP----G~~a~qdclLGmEFsGR-- 1491 (2376)
T KOG1202|consen 1424 GDLSSLRWI-ESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLS-----PDAIP----GDLASQDCLLGMEFSGR-- 1491 (2376)
T ss_pred ccccceeee-ecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCC-----cccCC----Cccchhhheeceeeccc--
Confidence 566677887 56643 45688888999999999999999998721 01112 22234467899999997
Q ss_pred ecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEE
Q psy9949 113 AKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRV 192 (383)
Q Consensus 113 ~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~V 192 (383)
.+-|.||+++.+ .-++|+-+.++.+++|.+|+...+++|+..|+.+.||||+|..++.. ++|+++
T Consensus 1492 --------d~~GrRvM~mvp---AksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~m----kkGeki 1556 (2376)
T KOG1202|consen 1492 --------DASGRRVMGMVP---AKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQM----KKGEKI 1556 (2376)
T ss_pred --------cCCCcEEEEeee---hhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccc----cCCcEE
Confidence 456999999986 47899999999999999999999999999999999999999989988 999999
Q ss_pred EEEcCCchHHHHHHHHHHHCCCEEEEEe-cCchHHHHH----hcCCCeeeeCCChHHHHHHhc---CCCccEEEEcCCCC
Q psy9949 193 LVLGASGGVGTMAVQLLKAWDIEVVTTC-SGDAKDLVT----SLNPNLVIDYNEPEAMHSIAG---AGPYDVILDAAGIP 264 (383)
Q Consensus 193 lI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~~~~~~~----~lg~~~v~~~~~~~~~~~i~~---~~g~d~v~d~~g~~ 264 (383)
|||+|+|++|++||.+|.++|++|+.++ +.++++++. ++...++-|+++.+|...+.. +.|+|+|++....+
T Consensus 1557 LIHaGsGGVGQAAIaiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrGVdlVLNSLaeE 1636 (2376)
T KOG1202|consen 1557 LIHAGSGGVGQAAIAIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRGVDLVLNSLAEE 1636 (2376)
T ss_pred EEecCCCchhHHHHHHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHhcCCCeeeehhhhhHH
Confidence 9999999999999999999999999999 556677664 345667788999999988764 35899999999988
Q ss_pred cccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHH
Q psy9949 265 LDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKF 344 (383)
Q Consensus 265 ~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 344 (383)
....+ ++|++ .+|||..+|..++++.++.|. ..+-.+.+|....+ -..++...++..++..+
T Consensus 1637 kLQAS--iRCLa--~~GRFLEIGKfDLSqNspLGM--avfLkNvsfHGiLL------------Dsvmege~e~~~ev~~L 1698 (2376)
T KOG1202|consen 1637 KLQAS--IRCLA--LHGRFLEIGKFDLSQNSPLGM--AVFLKNVSFHGILL------------DSVMEGEEEMWREVAAL 1698 (2376)
T ss_pred HHHHH--HHHHH--hcCeeeeecceecccCCcchh--hhhhcccceeeeeh------------hhhhcCcHHHHHHHHHH
Confidence 87777 99999 999999999887777665542 11112222222222 12334567888888888
Q ss_pred HHcC----CcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 345 IERG----QIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 345 ~~~g----~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
+++| ..+|+.+++|+-+++++||+.|.+++++||+|+++
T Consensus 1699 v~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1699 VAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKV 1741 (2376)
T ss_pred HHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEE
Confidence 8876 57889999999999999999999999999999975
No 124
>KOG1196|consensus
Probab=99.96 E-value=6.7e-27 Score=202.41 Aligned_cols=298 Identities=18% Similarity=0.195 Sum_probs=214.9
Q ss_pred CCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCceeEEEEecCCCCCCCCCCCEEEE
Q psy9949 50 PILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYG 129 (383)
Q Consensus 50 p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~ 129 (383)
.++++++||||.+|.+..|.-...++--.+ .+|.+...+-...-..++|+|++ ++..++++||.|.+
T Consensus 33 ~~~~s~~vlvknlYLS~DPymR~rM~~~~~-----------~~y~~~~~~G~pi~g~GV~kVi~--S~~~~~~~GD~v~g 99 (343)
T KOG1196|consen 33 VPLGSGEVLVKNLYLSCDPYMRIRMGKPDP-----------SDYAPPYEPGKPIDGFGVAKVID--SGHPNYKKGDLVWG 99 (343)
T ss_pred CCCCCccEEeEeeeecCCHHHHhhccCCCc-----------ccccCcccCCcEecCCceEEEEe--cCCCCCCcCceEEE
Confidence 457899999999999999876544432211 11122222211122378999999 56678999999999
Q ss_pred eecCCCCCCceEEEeecCc--ccccCC--CCCCHHHHH-hhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHH
Q psy9949 130 VIQPHKQGSFSKLILADSA--LVHKKP--SNISDEEAA-GVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTM 204 (383)
Q Consensus 130 ~~~~~~~g~~a~~~~v~~~--~~~~ip--~~~~~~~aa-~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ 204 (383)
+. +|.||.+++.+ ..++++ .++++.-.. .+..+++|||.++.+.... ++|++|+|.||+|++|++
T Consensus 100 ~~------gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~p----k~geTv~VSaAsGAvGql 169 (343)
T KOG1196|consen 100 IV------GWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSP----KKGETVFVSAASGAVGQL 169 (343)
T ss_pred ec------cceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCC----CCCCEEEEeeccchhHHH
Confidence 96 69999999765 334443 344444333 3457889999999999998 999999999999999999
Q ss_pred HHHHHHHCCCEEEEEe-cCchHHHH-HhcCCCeeeeCCCh-HHHHHHhcC--CCccEEEEcCCCCcccccccccccccCC
Q psy9949 205 AVQLLKAWDIEVVTTC-SGDAKDLV-TSLNPNLVIDYNEP-EAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGK 279 (383)
Q Consensus 205 ai~la~~~G~~Vi~~~-~~~~~~~~-~~lg~~~v~~~~~~-~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~ 279 (383)
+.|+|+.+|++|++++ ++++.+++ +++|.|..+||+++ +..+.+.+. .|+|+.||.+|+...... +..|. .
T Consensus 170 ~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNVGG~~lDav--l~nM~--~ 245 (343)
T KOG1196|consen 170 VGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENVGGKMLDAV--LLNMN--L 245 (343)
T ss_pred HHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEeccCcHHHHHH--HHhhh--h
Confidence 9999999999999999 45566766 56899999999997 777777764 589999999999987776 88889 9
Q ss_pred CceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeec
Q psy9949 280 FSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYN 359 (383)
Q Consensus 280 ~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~ 359 (383)
.||++.+|.-...+.+.. .+ .++...+.. +++.+.|... ..+.....+.++.+..++++|+|+..-+-.-.
T Consensus 246 ~gri~~CG~ISqYN~~~~---~~-~~~l~~ii~----Kr~~iqgflv-~d~~d~~~k~ld~l~~~ikegKI~y~edi~~G 316 (343)
T KOG1196|consen 246 HGRIAVCGMISQYNLENP---EG-LHNLSTIIY----KRIRIQGFLV-SDYLDKYPKFLDFLLPYIKEGKITYVEDIADG 316 (343)
T ss_pred ccceEeeeeehhccccCC---cc-ccchhhhee----eeEEeeeEEe-echhhhhHHHHHHHHHHHhcCceEEehhHHHH
Confidence 999999974222221100 00 111111111 2223333211 12223357888999999999999775554557
Q ss_pred CCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949 360 FCELPTAFEKVQQGHLRGKIILNA 383 (383)
Q Consensus 360 l~~~~~a~~~l~~~~~~gkvvl~~ 383 (383)
|++.++||.-|.++++.||.++++
T Consensus 317 len~P~A~vglf~GkNvGKqiv~v 340 (343)
T KOG1196|consen 317 LENGPSALVGLFHGKNVGKQLVKV 340 (343)
T ss_pred HhccHHHHHHHhccCcccceEEEe
Confidence 999999999999999999998874
No 125
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.96 E-value=5.5e-27 Score=212.83 Aligned_cols=209 Identities=31% Similarity=0.411 Sum_probs=176.7
Q ss_pred eEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCceeEEEEecCCCCCCCCCCCEEEEeecC--
Q psy9949 56 DVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQP-- 133 (383)
Q Consensus 56 eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~-- 133 (383)
||+|+|.++++|+.|+....|..+ ....+|.++|||++|+|+++|++++.|++||+|+++...
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~---------------~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~ 65 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYP---------------PPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGC 65 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCC---------------cCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCC
Confidence 689999999999999998887511 123457889999999999999999999999999987521
Q ss_pred ------------------CCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEE
Q psy9949 134 ------------------HKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVL 195 (383)
Q Consensus 134 ------------------~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ 195 (383)
...|+|++|+.++.+.++++|+++++++++.++.++.|||+++.....+ +++++|+|+
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~----~~~~~vli~ 141 (271)
T cd05188 66 GTCELCRELCPGGGILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVL----KPGDTVLVL 141 (271)
T ss_pred CCCHHHHhhCCCCCEeccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCC----CCCCEEEEE
Confidence 1259999999999999999999999999999999999999999877777 889999999
Q ss_pred cCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHh--cCCCccEEEEcCCC-Cccccccc
Q psy9949 196 GASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIA--GAGPYDVILDAAGI-PLDQINSY 271 (383)
Q Consensus 196 ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~--~~~g~d~v~d~~g~-~~~~~~~~ 271 (383)
|+++ +|++++++++..|.+|++++++ ++.+.++++|++.++++.+.++.+.+. ...++|++++++++ ......
T Consensus 142 g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~-- 218 (271)
T cd05188 142 GAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQA-- 218 (271)
T ss_pred CCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHH--
Confidence 9666 9999999999999999999965 466778889988888877766655543 23579999999998 443444
Q ss_pred ccccccCCCceEEEecC
Q psy9949 272 LPFLKTGKFSKFVTLRS 288 (383)
Q Consensus 272 ~~~l~~~~~G~~v~~~~ 288 (383)
+++++ ++|+++.++.
T Consensus 219 ~~~l~--~~G~~v~~~~ 233 (271)
T cd05188 219 LRLLR--PGGRIVVVGG 233 (271)
T ss_pred HHhcc--cCCEEEEEcc
Confidence 88999 9999999864
No 126
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.94 E-value=4.7e-26 Score=207.89 Aligned_cols=250 Identities=23% Similarity=0.306 Sum_probs=186.6
Q ss_pred CCCCccccCceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHH
Q psy9949 97 LEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSAL 176 (383)
Q Consensus 97 ~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l 176 (383)
.++|.++|||++|+|+++|+++++|++||+|+++ +.|++|+.++.+.++++|+++++++++.+ ++++|||+++
T Consensus 18 ~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~ 90 (277)
T cd08255 18 LPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF------GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV 90 (277)
T ss_pred CcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec------CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH
Confidence 4588999999999999999999999999999987 46999999999999999999999999988 7899999998
Q ss_pred HHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecC-chHHHHHhcC-CCeeeeCCChHHHHHHhcCCC
Q psy9949 177 QITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTCSG-DAKDLVTSLN-PNLVIDYNEPEAMHSIAGAGP 253 (383)
Q Consensus 177 ~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~~-~~~~~~~~lg-~~~v~~~~~~~~~~~i~~~~g 253 (383)
. ..++ +++++++|+| +|++|++++++|+.+|++ |++++++ ++.++++++| ++.+++.... .....+
T Consensus 91 ~-~~~~----~~g~~vlI~g-~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~~ 159 (277)
T cd08255 91 R-DAEP----RLGERVAVVG-LGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAADTAD-----EIGGRG 159 (277)
T ss_pred H-hcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCccccccchh-----hhcCCC
Confidence 6 6787 8999999997 799999999999999997 9999855 5667888898 5555544321 123457
Q ss_pred ccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEE-EEE-
Q psy9949 254 YDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRW-GFF- 331 (383)
Q Consensus 254 ~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~- 331 (383)
+|++||+++........ +++++ ++|+++.++..... . .. .. ..+..... .+.+..... ...
T Consensus 160 ~d~vl~~~~~~~~~~~~-~~~l~--~~g~~~~~g~~~~~-~--~~-----~~--~~~~~~~~----~~~~~~~~~~~~~~ 222 (277)
T cd08255 160 ADVVIEASGSPSALETA-LRLLR--DRGRVVLVGWYGLK-P--LL-----LG--EEFHFKRL----PIRSSQVYGIGRYD 222 (277)
T ss_pred CCEEEEccCChHHHHHH-HHHhc--CCcEEEEEeccCCC-c--cc-----cH--HHHHhccC----eEEeeccccccccc
Confidence 99999998865543332 88999 99999998653211 0 00 00 01111110 111110000 000
Q ss_pred ----cCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcC-CCCCeEEE
Q psy9949 332 ----MPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQG-HLRGKIIL 381 (383)
Q Consensus 332 ----~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~-~~~gkvvl 381 (383)
....+.+++++++++++.+++.+.+.|+++++++|++.+.++ ....|+++
T Consensus 223 ~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~ 277 (277)
T cd08255 223 RPRRWTEARNLEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL 277 (277)
T ss_pred ccccccccccHHHHHHHHHcCCccccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence 012367899999999999988788899999999999999876 23356653
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.74 E-value=1e-17 Score=130.43 Aligned_cols=85 Identities=28% Similarity=0.416 Sum_probs=70.9
Q ss_pred CCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCceeEEEEecCCCCCCCCCCCEEEEee--
Q psy9949 54 SKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVI-- 131 (383)
Q Consensus 54 ~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~-- 131 (383)
|+||||||+++|||++|++++.|.. .....+|.++|||++|+|+++|+++++|++||||+...
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~---------------~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 65 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGP---------------PPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNI 65 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSS---------------SSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEE
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhcc---------------ccCCCCCcccccceeeeeeeeccccccccccceeeeeccc
Confidence 7899999999999999999998841 24467899999999999999999999999999998631
Q ss_pred ----------------------cCCCCCCceEEEeecCcccccC
Q psy9949 132 ----------------------QPHKQGSFSKLILADSALVHKK 153 (383)
Q Consensus 132 ----------------------~~~~~g~~a~~~~v~~~~~~~i 153 (383)
+...+|+||||++++.++++|+
T Consensus 66 ~~~~c~~c~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 66 GCGECEYCLSGRPNLCPNPEVLGLGLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp ETSSSHHHHTTTGGGTTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred CccCchhhcCCccccCCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence 1245799999999999999875
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.38 E-value=5.5e-13 Score=107.18 Aligned_cols=126 Identities=25% Similarity=0.322 Sum_probs=93.0
Q ss_pred hHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhcC---CCccEEEEcCCCCccccccccccc
Q psy9949 200 GVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFL 275 (383)
Q Consensus 200 ~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l 275 (383)
++|++++|+|+.+|++|+++++++ ++++++++|++.++++++.++.+++++. .++|+||||+|+......+ ++++
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~-~~~l 79 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEA-IKLL 79 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHH-HHHE
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHHHH-HHHh
Confidence 589999999999999999999665 7789999999999999999899988864 3799999999966655554 9999
Q ss_pred ccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHc
Q psy9949 276 KTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIER 347 (383)
Q Consensus 276 ~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 347 (383)
+ ++|+++.+|.+. +. ...+.... +..++..+ .+....+.++++++++++++
T Consensus 80 ~--~~G~~v~vg~~~-------~~-------~~~~~~~~----~~~~~~~i-~g~~~~~~~~~~~~~~~la~ 130 (130)
T PF00107_consen 80 R--PGGRIVVVGVYG-------GD-------PISFNLMN----LMFKEITI-RGSWGGSPEDFQEALQLLAQ 130 (130)
T ss_dssp E--EEEEEEEESSTS-------TS-------EEEEEHHH----HHHTTEEE-EEESSGGHHHHHHHHHHHH-
T ss_pred c--cCCEEEEEEccC-------CC-------CCCCCHHH----HHhCCcEE-EEEccCCHHHHHHHHHHhcC
Confidence 9 999999997542 00 01111111 12222233 24444567899999988763
No 129
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.38 E-value=2e-12 Score=103.51 Aligned_cols=121 Identities=28% Similarity=0.418 Sum_probs=75.6
Q ss_pred cCCCeeeeCCChHHHHHHhcCCCccEEEEcCC--CCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHH
Q psy9949 231 LNPNLVIDYNEPEAMHSIAGAGPYDVILDAAG--IPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAF 308 (383)
Q Consensus 231 lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g--~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~ 308 (383)
||++.++||+..++ ...+++|+|||++| +....... .+++ ++|++|.++. ....+
T Consensus 1 LGAd~vidy~~~~~----~~~~~~D~ViD~~g~~~~~~~~~~-~~~l---~~G~~v~i~~---------------~~~~~ 57 (127)
T PF13602_consen 1 LGADEVIDYRDTDF----AGPGGVDVVIDTVGQTGESLLDAS-RKLL---PGGRVVSIGG---------------DLPSF 57 (127)
T ss_dssp CT-SEEEETTCSHH----HTTS-EEEEEESS-CCHHHCGGGC-CCTE---EEEEEEEE-S---------------HHHHH
T ss_pred CCcCEEecCCCccc----cCCCCceEEEECCCCccHHHHHHH-HHHC---CCCEEEEECC---------------cccch
Confidence 68999999998777 44578999999999 43332221 4554 6799988842 00011
Q ss_pred HHhhhhhccccccCCccEEEEE-Ec---CCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEE
Q psy9949 309 DLLKSNFESGELCKTNTIRWGF-FM---PIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381 (383)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl 381 (383)
....... . ..+.... .. ...+.++++.+++++|++++.+.++||++++++|++.+++++..||+||
T Consensus 58 ~~~~~~~--~-----~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 58 ARRLKGR--S-----IRYSFLFSVDPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp HHHHHCH--H-----CEEECCC-H--HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred hhhhccc--c-----eEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 1100000 0 0110000 01 1356799999999999999999999999999999999999999999997
No 130
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=98.96 E-value=5.4e-09 Score=98.89 Aligned_cols=173 Identities=10% Similarity=0.021 Sum_probs=114.0
Q ss_pred HHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-CchHHHHHhcCCCeeeeCCChHHHHHHhc
Q psy9949 172 AWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS-GDAKDLVTSLNPNLVIDYNEPEAMHSIAG 250 (383)
Q Consensus 172 A~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~i~~ 250 (383)
.+.++.+..++ .-+|++|+|.| .|.+|+.+++.++.+|++|+++.. +.+.+.++.+|++.+ + ..+.+
T Consensus 188 ~~~~i~r~t~~---~l~GktVvViG-~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~-~-----~~e~v-- 255 (413)
T cd00401 188 LIDGIKRATDV---MIAGKVAVVAG-YGDVGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVM-T-----MEEAV-- 255 (413)
T ss_pred hHHHHHHhcCC---CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEc-c-----HHHHH--
Confidence 34454444333 15899999999 999999999999999999999874 456788888998433 2 12222
Q ss_pred CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEE
Q psy9949 251 AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGF 330 (383)
Q Consensus 251 ~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (383)
.++|+||+|+|.......+.+++++ ++|+++.+|... ..+++..... ++..+.+ .
T Consensus 256 -~~aDVVI~atG~~~~i~~~~l~~mk--~GgilvnvG~~~---------------~eId~~~L~~-~el~i~g------~ 310 (413)
T cd00401 256 -KEGDIFVTTTGNKDIITGEHFEQMK--DGAIVCNIGHFD---------------VEIDVKGLKE-NAVEVVN------I 310 (413)
T ss_pred -cCCCEEEECCCCHHHHHHHHHhcCC--CCcEEEEeCCCC---------------CccCHHHHHh-hccEEEE------c
Confidence 3689999999988765544478889 999999985320 0111111100 1111111 1
Q ss_pred EcCCHH-HHH--HHHHHHHcCCc---cccccee-----ecCC-CHHHHHHHHhcCCCC-CeEEE
Q psy9949 331 FMPIPY-AVK--EINKFIERGQI---KPVIDSK-----YNFC-ELPTAFEKVQQGHLR-GKIIL 381 (383)
Q Consensus 331 ~~~~~~-~~~--~~~~l~~~g~l---~~~~~~~-----~~l~-~~~~a~~~l~~~~~~-gkvvl 381 (383)
.....+ .++ ..+.++++|++ ...++|. ++|+ |+.+++..+.++... -|+++
T Consensus 311 ~~~~~~~~~~~g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~ 374 (413)
T cd00401 311 KPQVDRYELPDGRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYF 374 (413)
T ss_pred cCCcceEEcCCcchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEE
Confidence 111112 344 68999999987 4567787 8999 999999999876542 35554
No 131
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=98.95 E-value=1.8e-08 Score=97.82 Aligned_cols=98 Identities=23% Similarity=0.279 Sum_probs=74.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCchHHHHHhcCCCee-eeCCCh-------------HHHHHH---
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGDAKDLVTSLNPNLV-IDYNEP-------------EAMHSI--- 248 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~~~~~~~~lg~~~v-~~~~~~-------------~~~~~i--- 248 (383)
.++++|+|.| +|.+|+++++.|+.+|++|++++ ++++++.++++|++.+ ++..+. ++.+..
T Consensus 163 ~pg~kVlViG-aG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~ 241 (509)
T PRK09424 163 VPPAKVLVIG-AGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMAL 241 (509)
T ss_pred cCCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHHH
Confidence 5799999999 99999999999999999999998 5567899999999854 554321 222211
Q ss_pred -hcC-CCccEEEEcCCCCc-----c-cccccccccccCCCceEEEecC
Q psy9949 249 -AGA-GPYDVILDAAGIPL-----D-QINSYLPFLKTGKFSKFVTLRS 288 (383)
Q Consensus 249 -~~~-~g~d~v~d~~g~~~-----~-~~~~~~~~l~~~~~G~~v~~~~ 288 (383)
.+. .++|++|+|+|.+. . ... .++.++ ++|++++++.
T Consensus 242 ~~~~~~gaDVVIetag~pg~~aP~lit~~-~v~~mk--pGgvIVdvg~ 286 (509)
T PRK09424 242 FAEQAKEVDIIITTALIPGKPAPKLITAE-MVASMK--PGSVIVDLAA 286 (509)
T ss_pred HHhccCCCCEEEECCCCCcccCcchHHHH-HHHhcC--CCCEEEEEcc
Confidence 121 57999999999753 2 122 288999 9999999864
No 132
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=97.95 E-value=4.5e-05 Score=74.22 Aligned_cols=99 Identities=25% Similarity=0.340 Sum_probs=70.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-CchHHHHHhcCCCee-eeCCC-------------hHHHHH----
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS-GDAKDLVTSLNPNLV-IDYNE-------------PEAMHS---- 247 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~-~~~~~~~~~lg~~~v-~~~~~-------------~~~~~~---- 247 (383)
.++++|+|.| +|.+|++++++++.+|++|++++. .++++.++++|++.+ ++..+ .++.+.
T Consensus 162 vp~akVlViG-aG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIG-AGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 3578999999 899999999999999999999884 457788888998754 33211 122211
Q ss_pred Hhc-CCCccEEEEcC---CCCc--ccccccccccccCCCceEEEecC
Q psy9949 248 IAG-AGPYDVILDAA---GIPL--DQINSYLPFLKTGKFSKFVTLRS 288 (383)
Q Consensus 248 i~~-~~g~d~v~d~~---g~~~--~~~~~~~~~l~~~~~G~~v~~~~ 288 (383)
+.+ ..++|++|+|+ |.+. ......++.++ +++.+|+++.
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MK--pGsvIVDlA~ 285 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMK--AGSVIVDLAA 285 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCC--CCCEEEEeee
Confidence 111 25799999999 5433 22222278899 9999998853
No 133
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=97.92 E-value=9.2e-05 Score=70.66 Aligned_cols=104 Identities=15% Similarity=0.083 Sum_probs=73.4
Q ss_pred HHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHh
Q psy9949 171 TAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIA 249 (383)
Q Consensus 171 tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~ 249 (383)
.+|.++.+..++. -.|++|+|.| .|.+|..+++.++.+|++|+++..+. +...+...|+. +.+ +.+.+
T Consensus 197 s~~~ai~rat~~~---l~Gk~VlViG-~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~-v~~-----l~eal- 265 (425)
T PRK05476 197 SLLDGIKRATNVL---IAGKVVVVAG-YGDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFR-VMT-----MEEAA- 265 (425)
T ss_pred hhHHHHHHhccCC---CCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCE-ecC-----HHHHH-
Confidence 3566766443441 3899999999 89999999999999999999988554 43444445654 221 22222
Q ss_pred cCCCccEEEEcCCCCcccccccccccccCCCceEEEecCC
Q psy9949 250 GAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSP 289 (383)
Q Consensus 250 ~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~ 289 (383)
.++|++|+++|.........+..++ +++.++..|..
T Consensus 266 --~~aDVVI~aTG~~~vI~~~~~~~mK--~GailiNvG~~ 301 (425)
T PRK05476 266 --ELGDIFVTATGNKDVITAEHMEAMK--DGAILANIGHF 301 (425)
T ss_pred --hCCCEEEECCCCHHHHHHHHHhcCC--CCCEEEEcCCC
Confidence 3799999999987654322377888 88888888654
No 134
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.87 E-value=0.00054 Score=62.33 Aligned_cols=151 Identities=17% Similarity=0.127 Sum_probs=95.1
Q ss_pred eEEEEecCCCCCCCCCCCEEEEeecCC----------CCC--------------CceEEEeecCcccccCCCCCCHHHHH
Q psy9949 108 CGKIVAKGPRVTDLNIDDVVYGVIQPH----------KQG--------------SFSKLILADSALVHKKPSNISDEEAA 163 (383)
Q Consensus 108 ~G~Vv~vG~~v~~~~~Gd~V~~~~~~~----------~~g--------------~~a~~~~v~~~~~~~ip~~~~~~~aa 163 (383)
-++|++ +.+.++.+|+||+++.+.. ..+ .|.+|.++..+..+. .-....-+
T Consensus 38 fA~Vve--S~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~---~~~e~~~~ 112 (314)
T PF11017_consen 38 FATVVE--SRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYD---PEREDWQM 112 (314)
T ss_pred EEEEEe--eCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCcCchhhhceeecCCCcccC---cchhHHHH
Confidence 377787 8889999999999986520 112 334444444333221 11122222
Q ss_pred hhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHH-HCCC-EEEEEecCchHHHHHhcCC-CeeeeCC
Q psy9949 164 GVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLK-AWDI-EVVTTCSGDAKDLVTSLNP-NLVIDYN 240 (383)
Q Consensus 164 ~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~-~~G~-~Vi~~~~~~~~~~~~~lg~-~~v~~~~ 240 (383)
.+-..+.|.|.. .+...-. .+-..+.|+|..|++-.++.++.+++ ..+. +++++.|..+.++.+++|. |.|+.|+
T Consensus 113 LlrPLf~Tsfll-~d~l~~~-~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~~N~~Fve~lg~Yd~V~~Yd 190 (314)
T PF11017_consen 113 LLRPLFITSFLL-DDFLFDN-DFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSARNVAFVESLGCYDEVLTYD 190 (314)
T ss_pred HHHHHHHHHHHH-HHHhccc-ccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEecCcchhhhhccCCceEEeehh
Confidence 333345555543 2222110 00245789999999999999999988 4554 9999999999999999995 6788776
Q ss_pred ChHHHHHHhcCCCccEEEEcCCCCccccc
Q psy9949 241 EPEAMHSIAGAGPYDVILDAAGIPLDQIN 269 (383)
Q Consensus 241 ~~~~~~~i~~~~g~d~v~d~~g~~~~~~~ 269 (383)
+-+.. +....-+++|.+|.......
T Consensus 191 ~i~~l----~~~~~~v~VDfaG~~~~~~~ 215 (314)
T PF11017_consen 191 DIDSL----DAPQPVVIVDFAGNGEVLAA 215 (314)
T ss_pred hhhhc----cCCCCEEEEECCCCHHHHHH
Confidence 52211 11457789999998876433
No 135
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=97.64 E-value=0.00063 Score=62.43 Aligned_cols=91 Identities=21% Similarity=0.234 Sum_probs=66.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD 266 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~ 266 (383)
.+++|+|.| .|.+|+.+++.++.+|++|++.+++. +.+.++++|+..+ .+ .++.+. ..++|+||++++....
T Consensus 151 ~g~kvlViG-~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~-~~--~~l~~~---l~~aDiVI~t~p~~~i 223 (296)
T PRK08306 151 HGSNVLVLG-FGRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPF-HL--SELAEE---VGKIDIIFNTIPALVL 223 (296)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeee-cH--HHHHHH---hCCCCEEEECCChhhh
Confidence 588999999 89999999999999999999998664 5566777886533 21 122222 2479999999875543
Q ss_pred cccccccccccCCCceEEEecC
Q psy9949 267 QINSYLPFLKTGKFSKFVTLRS 288 (383)
Q Consensus 267 ~~~~~~~~l~~~~~G~~v~~~~ 288 (383)
... .++.++ +++.+++++.
T Consensus 224 ~~~-~l~~~~--~g~vIIDla~ 242 (296)
T PRK08306 224 TKE-VLSKMP--PEALIIDLAS 242 (296)
T ss_pred hHH-HHHcCC--CCcEEEEEcc
Confidence 322 266788 8888988853
No 136
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=97.62 E-value=0.0004 Score=65.97 Aligned_cols=91 Identities=14% Similarity=-0.002 Sum_probs=67.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL 265 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~ 265 (383)
..|++|+|.| .|.+|+.+++.++.+|++|+++..+ .+...+...|+. +.+ ..+.+ .+.|++|+++|...
T Consensus 193 l~Gk~VvViG-~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----leeal---~~aDVVItaTG~~~ 262 (406)
T TIGR00936 193 IAGKTVVVAG-YGWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFR-VMT-----MEEAA---KIGDIFITATGNKD 262 (406)
T ss_pred CCcCEEEEEC-CCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCE-eCC-----HHHHH---hcCCEEEECCCCHH
Confidence 5799999999 9999999999999999999998744 344445556653 321 12222 36899999999887
Q ss_pred ccccccccccccCCCceEEEecCC
Q psy9949 266 DQINSYLPFLKTGKFSKFVTLRSP 289 (383)
Q Consensus 266 ~~~~~~~~~l~~~~~G~~v~~~~~ 289 (383)
......+..++ +++.++.+|..
T Consensus 263 vI~~~~~~~mK--~GailiN~G~~ 284 (406)
T TIGR00936 263 VIRGEHFENMK--DGAIVANIGHF 284 (406)
T ss_pred HHHHHHHhcCC--CCcEEEEECCC
Confidence 64433378888 89999888653
No 137
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=97.57 E-value=0.00038 Score=63.24 Aligned_cols=95 Identities=18% Similarity=0.093 Sum_probs=57.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecC-chHHHHHh----cCCCeeeeCCChHHHHHHh-cCCCccEEE
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDI--EVVTTCSG-DAKDLVTS----LNPNLVIDYNEPEAMHSIA-GAGPYDVIL 258 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~--~Vi~~~~~-~~~~~~~~----lg~~~v~~~~~~~~~~~i~-~~~g~d~v~ 258 (383)
+++++||..| +|+ |..++++++..|. +|++++.+ +..+.+++ .+.+.+-.. ..++. .+. ..+.+|+|+
T Consensus 76 ~~g~~VLDiG-~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~-~~d~~-~l~~~~~~fD~Vi 151 (272)
T PRK11873 76 KPGETVLDLG-SGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFR-LGEIE-ALPVADNSVDVII 151 (272)
T ss_pred CCCCEEEEeC-CCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEE-Ecchh-hCCCCCCceeEEE
Confidence 8999999999 666 8888888887765 79999854 44455443 444333111 11111 111 124699998
Q ss_pred EcCC-----CCcccccccccccccCCCceEEEec
Q psy9949 259 DAAG-----IPLDQINSYLPFLKTGKFSKFVTLR 287 (383)
Q Consensus 259 d~~g-----~~~~~~~~~~~~l~~~~~G~~v~~~ 287 (383)
.... ........+.++|+ ++|+++..+
T Consensus 152 ~~~v~~~~~d~~~~l~~~~r~Lk--pGG~l~i~~ 183 (272)
T PRK11873 152 SNCVINLSPDKERVFKEAFRVLK--PGGRFAISD 183 (272)
T ss_pred EcCcccCCCCHHHHHHHHHHHcC--CCcEEEEEE
Confidence 6532 11111122278899 999998864
No 138
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.56 E-value=0.00058 Score=59.35 Aligned_cols=78 Identities=23% Similarity=0.426 Sum_probs=58.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chH-HHHHhcCC----CeeeeCCChHH----HHHHh-cCCCcc
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAK-DLVTSLNP----NLVIDYNEPEA----MHSIA-GAGPYD 255 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~-~~~~~lg~----~~v~~~~~~~~----~~~i~-~~~g~d 255 (383)
-+++.++|+||++|+|.++++.+...|++|+.+.|. +++ +++.+++. ...+|..+..- .+.+. +.+.+|
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iD 83 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRID 83 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCccc
Confidence 356889999999999999999999999999999966 455 46677883 12356555422 22222 246799
Q ss_pred EEEEcCCCC
Q psy9949 256 VILDAAGIP 264 (383)
Q Consensus 256 ~v~d~~g~~ 264 (383)
+.++++|..
T Consensus 84 iLvNNAGl~ 92 (246)
T COG4221 84 ILVNNAGLA 92 (246)
T ss_pred EEEecCCCC
Confidence 999999964
No 139
>PLN02494 adenosylhomocysteinase
Probab=97.50 E-value=0.00069 Score=65.05 Aligned_cols=90 Identities=13% Similarity=0.087 Sum_probs=67.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL 265 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~ 265 (383)
-.|++|+|.| .|.+|..+++.++.+|++|+++..+. +...+...|+.. . +..+.+ ...|++++++|...
T Consensus 252 LaGKtVvViG-yG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~v-v-----~leEal---~~ADVVI~tTGt~~ 321 (477)
T PLN02494 252 IAGKVAVICG-YGDVGKGCAAAMKAAGARVIVTEIDPICALQALMEGYQV-L-----TLEDVV---SEADIFVTTTGNKD 321 (477)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCee-c-----cHHHHH---hhCCEEEECCCCcc
Confidence 4789999999 99999999999999999999987554 444555666642 2 122222 35899999999876
Q ss_pred ccccccccccccCCCceEEEecC
Q psy9949 266 DQINSYLPFLKTGKFSKFVTLRS 288 (383)
Q Consensus 266 ~~~~~~~~~l~~~~~G~~v~~~~ 288 (383)
......++.++ +++.++.+|.
T Consensus 322 vI~~e~L~~MK--~GAiLiNvGr 342 (477)
T PLN02494 322 IIMVDHMRKMK--NNAIVCNIGH 342 (477)
T ss_pred chHHHHHhcCC--CCCEEEEcCC
Confidence 53222388999 9999999875
No 140
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.46 E-value=0.00061 Score=68.58 Aligned_cols=77 Identities=22% Similarity=0.339 Sum_probs=56.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC----------------------chHHHHHhcCCCeeeeCCC-hH
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG----------------------DAKDLVTSLNPNLVIDYNE-PE 243 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~----------------------~~~~~~~~lg~~~v~~~~~-~~ 243 (383)
+.|++|+|.| +|.+|+++++.++..|++|+++... .+.+.++++|++..++... .+
T Consensus 135 ~~g~~V~VIG-aGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~~~ 213 (564)
T PRK12771 135 DTGKRVAVIG-GGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVGED 213 (564)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEECCc
Confidence 6789999999 8999999999999999998888732 1235667889876555332 22
Q ss_pred H-HHHHhcCCCccEEEEcCCCCcc
Q psy9949 244 A-MHSIAGAGPYDVILDAAGIPLD 266 (383)
Q Consensus 244 ~-~~~i~~~~g~d~v~d~~g~~~~ 266 (383)
. .+.+ ..++|+||+++|....
T Consensus 214 ~~~~~~--~~~~D~Vi~AtG~~~~ 235 (564)
T PRK12771 214 ITLEQL--EGEFDAVFVAIGAQLG 235 (564)
T ss_pred CCHHHH--HhhCCEEEEeeCCCCC
Confidence 1 1122 1369999999998754
No 141
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.33 E-value=0.0043 Score=59.85 Aligned_cols=90 Identities=18% Similarity=0.126 Sum_probs=65.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL 265 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~ 265 (383)
-.|++|+|.| .|.+|..+++.++.+|++|+++.++. +...+...|+.. . ++.+.+ ...|+|+.++|...
T Consensus 252 LaGKtVgVIG-~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~-~-----~leell---~~ADIVI~atGt~~ 321 (476)
T PTZ00075 252 IAGKTVVVCG-YGDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQV-V-----TLEDVV---ETADIFVTATGNKD 321 (476)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCcee-c-----cHHHHH---hcCCEEEECCCccc
Confidence 4789999999 89999999999999999998887543 332333456532 1 122222 36899999998876
Q ss_pred ccccccccccccCCCceEEEecC
Q psy9949 266 DQINSYLPFLKTGKFSKFVTLRS 288 (383)
Q Consensus 266 ~~~~~~~~~l~~~~~G~~v~~~~ 288 (383)
......++.++ +++.++.+|.
T Consensus 322 iI~~e~~~~MK--pGAiLINvGr 342 (476)
T PTZ00075 322 IITLEHMRRMK--NNAIVGNIGH 342 (476)
T ss_pred ccCHHHHhccC--CCcEEEEcCC
Confidence 54322388899 9999999864
No 142
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.31 E-value=0.0018 Score=52.06 Aligned_cols=90 Identities=22% Similarity=0.294 Sum_probs=59.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc-hH-HHHHhcCCC--eeeeCCChHHHHHHhcCCCccEEEEcCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD-AK-DLVTSLNPN--LVIDYNEPEAMHSIAGAGPYDVILDAAG 262 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~-~~-~~~~~lg~~--~v~~~~~~~~~~~i~~~~g~d~v~d~~g 262 (383)
++.+++|.| +|++|.+++..+...|+ +|+.+.|+. +. ++++.++.. .++.+++ +.+. ...+|+||.|++
T Consensus 11 ~~~~vlviG-aGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~--~~~~---~~~~DivI~aT~ 84 (135)
T PF01488_consen 11 KGKRVLVIG-AGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED--LEEA---LQEADIVINATP 84 (135)
T ss_dssp TTSEEEEES-SSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG--HCHH---HHTESEEEE-SS
T ss_pred CCCEEEEEC-CHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH--HHHH---HhhCCeEEEecC
Confidence 688999999 79999999999999999 588888774 33 466667443 2344432 2222 236999999998
Q ss_pred CCcccccccccccccCCC----ceEEEec
Q psy9949 263 IPLDQINSYLPFLKTGKF----SKFVTLR 287 (383)
Q Consensus 263 ~~~~~~~~~~~~l~~~~~----G~~v~~~ 287 (383)
....... -..+. .. +.+++++
T Consensus 85 ~~~~~i~--~~~~~--~~~~~~~~v~Dla 109 (135)
T PF01488_consen 85 SGMPIIT--EEMLK--KASKKLRLVIDLA 109 (135)
T ss_dssp TTSTSST--HHHHT--TTCHHCSEEEES-
T ss_pred CCCcccC--HHHHH--HHHhhhhceeccc
Confidence 8754333 33444 33 4667764
No 143
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.14 E-value=0.0019 Score=57.66 Aligned_cols=78 Identities=27% Similarity=0.484 Sum_probs=56.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHhcC----CC-ee--eeCCChHHHHHHh----cC-C
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTSLN----PN-LV--IDYNEPEAMHSIA----GA-G 252 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~lg----~~-~v--~~~~~~~~~~~i~----~~-~ 252 (383)
..+.+++|+||++|+|...+..+...|.+++.++|++ +++ +++++. .. .+ .|..+.+-.+.+. .. .
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~ 83 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG 83 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence 5678999999999999999999999999999999775 443 334433 21 23 3555544444433 22 4
Q ss_pred CccEEEEcCCCC
Q psy9949 253 PYDVILDAAGIP 264 (383)
Q Consensus 253 g~d~v~d~~g~~ 264 (383)
.+|+.++++|-.
T Consensus 84 ~IdvLVNNAG~g 95 (265)
T COG0300 84 PIDVLVNNAGFG 95 (265)
T ss_pred cccEEEECCCcC
Confidence 799999999964
No 144
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.12 E-value=0.0011 Score=61.36 Aligned_cols=110 Identities=21% Similarity=0.298 Sum_probs=75.8
Q ss_pred cccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc-h-
Q psy9949 148 ALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD-A- 224 (383)
Q Consensus 148 ~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~-~- 224 (383)
+.++++|+.+..+.++... +...+++++...... ....++.+|+|.| +|.+|..+++.++..|+ +|+++.++. +
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~-~~~l~~~~V~ViG-aG~iG~~~a~~L~~~g~~~V~v~~r~~~ra 215 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKI-FGNLKGKKVLVIG-AGEMGELAAKHLAAKGVAEITIANRTYERA 215 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHH-hCCccCCEEEEEC-cHHHHHHHHHHHHHcCCCEEEEEeCCHHHH
Confidence 4678889999888887765 344566666532221 0002689999999 79999999999998886 777777664 3
Q ss_pred HHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949 225 KDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD 266 (383)
Q Consensus 225 ~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~ 266 (383)
.++++++|.. +.+. .++.+.+ ..+|+||.|++.+..
T Consensus 216 ~~la~~~g~~-~~~~--~~~~~~l---~~aDvVi~at~~~~~ 251 (311)
T cd05213 216 EELAKELGGN-AVPL--DELLELL---NEADVVISATGAPHY 251 (311)
T ss_pred HHHHHHcCCe-EEeH--HHHHHHH---hcCCEEEECCCCCch
Confidence 4677888874 3332 1233322 358999999998775
No 145
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.11 E-value=0.00018 Score=69.31 Aligned_cols=144 Identities=14% Similarity=0.225 Sum_probs=93.0
Q ss_pred cccCceeEEEEecCCCCCCCCCCCEEE--------------EeecCCCCCCceEEEeecCccccc---C-CCCCCHHHHH
Q psy9949 102 TLGRDFCGKIVAKGPRVTDLNIDDVVY--------------GVIQPHKQGSFSKLILADSALVHK---K-PSNISDEEAA 163 (383)
Q Consensus 102 ~~G~e~~G~Vv~vG~~v~~~~~Gd~V~--------------~~~~~~~~g~~a~~~~v~~~~~~~---i-p~~~~~~~aa 163 (383)
--|.|+++.+.+|++++++.-+|+.-+ +.++...++.|++++.++. .+.. + +..+|...+|
T Consensus 89 ~~~~~a~~hl~~Va~GldS~V~GE~qI~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~A 167 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDSMVVGETQILGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGK-RVRTETDISAGAVSISSAA 167 (417)
T ss_pred cCchHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-hhhhhcCCCCCCcCHHHHH
Confidence 458899999999999988766666543 1122233468888888875 3332 4 3344443333
Q ss_pred hhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc-h-HHHHHhcCCCeeeeCC
Q psy9949 164 GVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD-A-KDLVTSLNPNLVIDYN 240 (383)
Q Consensus 164 ~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~-~-~~~~~~lg~~~v~~~~ 240 (383)
.- .+.. .... .++++|+|.| +|.+|..+++.++..|+ +|+++.++. + .++++++|.. .++.
T Consensus 168 v~--------la~~-~~~~----l~~~~VlViG-aG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~- 231 (417)
T TIGR01035 168 VE--------LAER-IFGS----LKGKKALLIG-AGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKF- 231 (417)
T ss_pred HH--------HHHH-HhCC----ccCCEEEEEC-ChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeH-
Confidence 11 1112 2222 4778999999 79999999999999995 888888664 3 3467777764 3322
Q ss_pred ChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949 241 EPEAMHSIAGAGPYDVILDAAGIPLD 266 (383)
Q Consensus 241 ~~~~~~~i~~~~g~d~v~d~~g~~~~ 266 (383)
.+..+.+ .++|+||+|++.+..
T Consensus 232 -~~l~~~l---~~aDvVi~aT~s~~~ 253 (417)
T TIGR01035 232 -EDLEEYL---AEADIVISSTGAPHP 253 (417)
T ss_pred -HHHHHHH---hhCCEEEECCCCCCc
Confidence 1222222 479999999987764
No 146
>PRK08324 short chain dehydrogenase; Validated
Probab=97.07 E-value=0.0022 Score=66.11 Aligned_cols=112 Identities=23% Similarity=0.212 Sum_probs=72.5
Q ss_pred CCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEE
Q psy9949 137 GSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEV 216 (383)
Q Consensus 137 g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~V 216 (383)
-++++|..++...++.+ +..+.+++.. ...... ...++++++|+||+|++|..+++.+...|++|
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l------------~~~~~~--~~l~gk~vLVTGasggIG~~la~~L~~~Ga~V 449 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKL------------QRMPKP--KPLAGKVALVTGAAGGIGKATAKRLAAEGACV 449 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhh------------hcCCCC--cCCCCCEEEEecCCCHHHHHHHHHHHHCcCEE
Confidence 46678888888777777 6666666641 111111 00367999999999999999999999999999
Q ss_pred EEEecCc-hHH-HHHhcCC--C-e--eeeCCChHHHHHHh-----cCCCccEEEEcCCC
Q psy9949 217 VTTCSGD-AKD-LVTSLNP--N-L--VIDYNEPEAMHSIA-----GAGPYDVILDAAGI 263 (383)
Q Consensus 217 i~~~~~~-~~~-~~~~lg~--~-~--v~~~~~~~~~~~i~-----~~~g~d~v~d~~g~ 263 (383)
++++++. +.+ ....++. . . ..|..+.+-...+. ..+++|++|+++|.
T Consensus 450 vl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~ 508 (681)
T PRK08324 450 VLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGI 508 (681)
T ss_pred EEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 9999664 333 2333432 1 1 13444433222221 23689999999984
No 147
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.06 E-value=0.0034 Score=52.99 Aligned_cols=77 Identities=16% Similarity=0.249 Sum_probs=56.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcC--C-CeeeeCCChH----HHHHHhcC-CCccEEE
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLN--P-NLVIDYNEPE----AMHSIAGA-GPYDVIL 258 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg--~-~~v~~~~~~~----~~~~i~~~-~g~d~v~ 258 (383)
.|.+|||+||++|+|+.+++-...+|-+||...+++ +++.++..- . ..+.|..+.+ +.+.+++. ...++++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli 83 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI 83 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence 578999999999999999999999999999998775 455444322 1 2445655544 55555543 4689999
Q ss_pred EcCCCC
Q psy9949 259 DAAGIP 264 (383)
Q Consensus 259 d~~g~~ 264 (383)
+++|-.
T Consensus 84 NNAGIq 89 (245)
T COG3967 84 NNAGIQ 89 (245)
T ss_pred eccccc
Confidence 999863
No 148
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=96.97 E-value=0.0071 Score=57.37 Aligned_cols=95 Identities=20% Similarity=0.219 Sum_probs=61.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHH-HhcCCCeeeeCCC-hHHHHHHhcCCCccEEEEcCCC-
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLV-TSLNPNLVIDYNE-PEAMHSIAGAGPYDVILDAAGI- 263 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~-~~lg~~~v~~~~~-~~~~~~i~~~~g~d~v~d~~g~- 263 (383)
++.+|+|.| +|.+|+.+++.++.+|++|++++++ ++.+.+ ..++......+.+ ..+.+.+ ..+|++|++++.
T Consensus 166 ~~~~VlViG-aG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l---~~aDvVI~a~~~~ 241 (370)
T TIGR00518 166 EPGDVTIIG-GGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAV---KRADLLIGAVLIP 241 (370)
T ss_pred CCceEEEEc-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHH---ccCCEEEEccccC
Confidence 345699999 7999999999999999998888855 344444 4455432222222 2223222 479999999843
Q ss_pred ----CcccccccccccccCCCceEEEecC
Q psy9949 264 ----PLDQINSYLPFLKTGKFSKFVTLRS 288 (383)
Q Consensus 264 ----~~~~~~~~~~~l~~~~~G~~v~~~~ 288 (383)
+.......++.++ +++.+++++.
T Consensus 242 g~~~p~lit~~~l~~mk--~g~vIvDva~ 268 (370)
T TIGR00518 242 GAKAPKLVSNSLVAQMK--PGAVIVDVAI 268 (370)
T ss_pred CCCCCcCcCHHHHhcCC--CCCEEEEEec
Confidence 2111121266778 8999998853
No 149
>PRK05993 short chain dehydrogenase; Provisional
Probab=96.96 E-value=0.0049 Score=56.03 Aligned_cols=76 Identities=21% Similarity=0.461 Sum_probs=52.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCee-eeCCChHHHHH----Hhc-C-CCccEEEE
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLV-IDYNEPEAMHS----IAG-A-GPYDVILD 259 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v-~~~~~~~~~~~----i~~-~-~g~d~v~d 259 (383)
.+++++|+||+|++|..+++.+...|++|++++++. ..+.+.+.+...+ .|..+....+. +.+ . +.+|++|+
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~ 82 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFN 82 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEE
Confidence 467899999999999999999888999999999664 3444444454433 45555432222 211 2 46999999
Q ss_pred cCCC
Q psy9949 260 AAGI 263 (383)
Q Consensus 260 ~~g~ 263 (383)
++|.
T Consensus 83 ~Ag~ 86 (277)
T PRK05993 83 NGAY 86 (277)
T ss_pred CCCc
Confidence 9874
No 150
>PRK12742 oxidoreductase; Provisional
Probab=96.95 E-value=0.0064 Score=53.68 Aligned_cols=77 Identities=29% Similarity=0.437 Sum_probs=52.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc--hH-HHHHhcCCCee-eeCCChH-HHHHHhcCCCccEEEEcCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD--AK-DLVTSLNPNLV-IDYNEPE-AMHSIAGAGPYDVILDAAG 262 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~--~~-~~~~~lg~~~v-~~~~~~~-~~~~i~~~~g~d~v~d~~g 262 (383)
++++++|+||+|++|..+++.+...|++|+.+.+.. +. ++..+++...+ .|..+.. +.+.+.+.+++|++|+++|
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag 84 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNAG 84 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECCC
Confidence 578999999999999999999999999988876432 22 33345554432 3443432 3333334467999999988
Q ss_pred CC
Q psy9949 263 IP 264 (383)
Q Consensus 263 ~~ 264 (383)
..
T Consensus 85 ~~ 86 (237)
T PRK12742 85 IA 86 (237)
T ss_pred CC
Confidence 63
No 151
>PRK06182 short chain dehydrogenase; Validated
Probab=96.87 E-value=0.0077 Score=54.56 Aligned_cols=77 Identities=25% Similarity=0.354 Sum_probs=53.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCee-eeCCChHHHHHHh-----cCCCccEEEEc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLV-IDYNEPEAMHSIA-----GAGPYDVILDA 260 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v-~~~~~~~~~~~i~-----~~~g~d~v~d~ 260 (383)
++++++|+|++|++|..+++.+...|++|++++++. +.+.+...+...+ .|..+.+..+.+. ..+++|++|++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ 81 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNN 81 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 357899999999999999999888999999998664 3333333343322 4555543332222 23589999999
Q ss_pred CCCC
Q psy9949 261 AGIP 264 (383)
Q Consensus 261 ~g~~ 264 (383)
+|..
T Consensus 82 ag~~ 85 (273)
T PRK06182 82 AGYG 85 (273)
T ss_pred CCcC
Confidence 9853
No 152
>PRK12367 short chain dehydrogenase; Provisional
Probab=96.86 E-value=0.0072 Score=53.94 Aligned_cols=73 Identities=22% Similarity=0.348 Sum_probs=49.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-h-HHHHHhcCCCee--eeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-A-KDLVTSLNPNLV--IDYNEPEAMHSIAGAGPYDVILDAAGI 263 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~-~~~~~~lg~~~v--~~~~~~~~~~~i~~~~g~d~v~d~~g~ 263 (383)
.+++++|+||+|++|..+++.+...|++|++++++. + .+.... +.... .|..+.+-.. ...+++|++|+++|.
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~~~--~~~~~iDilVnnAG~ 89 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDE-SPNEWIKWECGKEESLD--KQLASLDVLILNHGI 89 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhcc-CCCeEEEeeCCCHHHHH--HhcCCCCEEEECCcc
Confidence 468999999999999999999989999999988654 2 111111 11122 3444332221 123579999999985
No 153
>KOG1205|consensus
Probab=96.84 E-value=0.0063 Score=54.77 Aligned_cols=77 Identities=27% Similarity=0.368 Sum_probs=53.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-CchHH----HHHhcCCCe-e----eeCCChHHHH----H-HhcCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS-GDAKD----LVTSLNPNL-V----IDYNEPEAMH----S-IAGAG 252 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~-~~~~~----~~~~lg~~~-v----~~~~~~~~~~----~-i~~~~ 252 (383)
.+++|+|+||++|+|.+++.-....|++++.+++ .++++ .+++.+... + .|-.+.+..+ + +...+
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg 90 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG 90 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence 6889999999999999988888888998888884 44444 334444332 3 2444433222 2 23468
Q ss_pred CccEEEEcCCCC
Q psy9949 253 PYDVILDAAGIP 264 (383)
Q Consensus 253 g~d~v~d~~g~~ 264 (383)
++|+.++++|-.
T Consensus 91 ~vDvLVNNAG~~ 102 (282)
T KOG1205|consen 91 RVDVLVNNAGIS 102 (282)
T ss_pred CCCEEEecCccc
Confidence 999999999863
No 154
>PRK05693 short chain dehydrogenase; Provisional
Probab=96.79 E-value=0.0064 Score=55.13 Aligned_cols=74 Identities=27% Similarity=0.392 Sum_probs=51.9
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCee-eeCCChHHHHHH----h-cCCCccEEEEcCC
Q psy9949 190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLV-IDYNEPEAMHSI----A-GAGPYDVILDAAG 262 (383)
Q Consensus 190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v-~~~~~~~~~~~i----~-~~~g~d~v~d~~g 262 (383)
++++|+||+|++|..+++.+...|++|++++++. +.+.+.+.+...+ .|..+.....++ . ..+++|++|+++|
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag 81 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAG 81 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 4799999999999999999988999999998664 3343344444333 465553333222 2 2357999999998
Q ss_pred C
Q psy9949 263 I 263 (383)
Q Consensus 263 ~ 263 (383)
.
T Consensus 82 ~ 82 (274)
T PRK05693 82 Y 82 (274)
T ss_pred C
Confidence 4
No 155
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.76 E-value=0.0095 Score=55.70 Aligned_cols=76 Identities=21% Similarity=0.412 Sum_probs=53.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH----HHHhcCCCe-e--eeCCChHHHHHHh----c-CCCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD----LVTSLNPNL-V--IDYNEPEAMHSIA----G-AGPY 254 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~----~~~~lg~~~-v--~~~~~~~~~~~i~----~-~~g~ 254 (383)
.+++++|+||+|++|.++++.+...|++|+++++++ +.+ .+++.|.+. + .|..+.+-.+.+. + .+++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 85 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI 85 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 568999999999999999999999999999998764 322 223445432 1 3555543333322 2 2679
Q ss_pred cEEEEcCCC
Q psy9949 255 DVILDAAGI 263 (383)
Q Consensus 255 d~v~d~~g~ 263 (383)
|++|+++|.
T Consensus 86 D~lVnnAG~ 94 (330)
T PRK06139 86 DVWVNNVGV 94 (330)
T ss_pred CEEEECCCc
Confidence 999999985
No 156
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.76 E-value=0.0045 Score=52.87 Aligned_cols=98 Identities=23% Similarity=0.194 Sum_probs=70.2
Q ss_pred hhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH-----HHHHhcCCCeeeeCCChHHHHHHhcCCC
Q psy9949 179 TAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-----DLVTSLNPNLVIDYNEPEAMHSIAGAGP 253 (383)
Q Consensus 179 ~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~-----~~~~~lg~~~v~~~~~~~~~~~i~~~~g 253 (383)
...+ +++++||=.| .|.|+.++-+|+..| +|+.+.+.+++ ..++.+|..+|.....+ -.....+.+.
T Consensus 67 ~L~~----~~g~~VLEIG--tGsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gD-G~~G~~~~aP 138 (209)
T COG2518 67 LLEL----KPGDRVLEIG--TGSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHGD-GSKGWPEEAP 138 (209)
T ss_pred HhCC----CCCCeEEEEC--CCchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECC-cccCCCCCCC
Confidence 5566 8999999998 567999999999888 99999877653 34567888655322211 1112223357
Q ss_pred ccEEEEcCCCCcccccccccccccCCCceEEEec
Q psy9949 254 YDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLR 287 (383)
Q Consensus 254 ~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~ 287 (383)
||.|+-+.+.+..... +++.|+ ++|++|...
T Consensus 139 yD~I~Vtaaa~~vP~~-Ll~QL~--~gGrlv~Pv 169 (209)
T COG2518 139 YDRIIVTAAAPEVPEA-LLDQLK--PGGRLVIPV 169 (209)
T ss_pred cCEEEEeeccCCCCHH-HHHhcc--cCCEEEEEE
Confidence 9999988888776554 388999 999998763
No 157
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.72 E-value=0.013 Score=52.56 Aligned_cols=76 Identities=20% Similarity=0.315 Sum_probs=53.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHHhcCCCee-eeCCChHHHHHHhc-----CCCccEEEE
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVTSLNPNLV-IDYNEPEAMHSIAG-----AGPYDVILD 259 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~~lg~~~v-~~~~~~~~~~~i~~-----~~g~d~v~d 259 (383)
++++|+|+||+|++|..+++.+...|++|+++++++. .+ ...+++...+ .|..+.+..+++.+ .+++|++|.
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 85 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 5789999999999999999999999999999986643 22 3344543322 35555433322221 257999999
Q ss_pred cCCC
Q psy9949 260 AAGI 263 (383)
Q Consensus 260 ~~g~ 263 (383)
++|.
T Consensus 86 ~ag~ 89 (255)
T PRK06057 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 9875
No 158
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.69 E-value=0.012 Score=51.97 Aligned_cols=76 Identities=16% Similarity=0.232 Sum_probs=50.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHH-Hh---cCCCeee--eCCChHHHHHH----hc-CCCcc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLV-TS---LNPNLVI--DYNEPEAMHSI----AG-AGPYD 255 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~-~~---lg~~~v~--~~~~~~~~~~i----~~-~~g~d 255 (383)
.+++|+|+|++|++|..+++.+...|++|+.+++++. .+.+ .+ .+....+ |..+.+-.+.+ .. .+++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4689999999999999999999999999999997643 2222 22 2222222 33333322222 11 25689
Q ss_pred EEEEcCCC
Q psy9949 256 VILDAAGI 263 (383)
Q Consensus 256 ~v~d~~g~ 263 (383)
.++.++|.
T Consensus 84 ~ii~~ag~ 91 (238)
T PRK05786 84 GLVVTVGG 91 (238)
T ss_pred EEEEcCCC
Confidence 99999875
No 159
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.68 E-value=0.013 Score=51.95 Aligned_cols=76 Identities=29% Similarity=0.426 Sum_probs=53.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCCCee-eeCCChHHHHHHh-cCCCccEEEEcCCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNPNLV-IDYNEPEAMHSIA-GAGPYDVILDAAGI 263 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~~~v-~~~~~~~~~~~i~-~~~g~d~v~d~~g~ 263 (383)
.+++++|+|++|++|..+++.+...|++|++++++. +. ++....+...+ .|..+.+....+. ..+++|++|.++|.
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag~ 87 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAGI 87 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCCC
Confidence 568999999999999999999999999999988664 33 33344454322 3555443333332 33579999999985
No 160
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=96.67 E-value=0.021 Score=52.20 Aligned_cols=90 Identities=16% Similarity=0.201 Sum_probs=62.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD 266 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~ 266 (383)
.+++++|.| .|.+|.+++..++.+|++|++..++. +.+.+.++|... +.+ .++.+. ..++|+||+++.....
T Consensus 150 ~gk~v~IiG-~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~-~~~--~~l~~~---l~~aDiVint~P~~ii 222 (287)
T TIGR02853 150 HGSNVMVLG-FGRTGMTIARTFSALGARVFVGARSSADLARITEMGLIP-FPL--NKLEEK---VAEIDIVINTIPALVL 222 (287)
T ss_pred CCCEEEEEc-ChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCee-ecH--HHHHHH---hccCCEEEECCChHHh
Confidence 578999999 89999999999999999999888764 334445566432 211 122222 2479999999876543
Q ss_pred cccccccccccCCCceEEEec
Q psy9949 267 QINSYLPFLKTGKFSKFVTLR 287 (383)
Q Consensus 267 ~~~~~~~~l~~~~~G~~v~~~ 287 (383)
... .++.++ ++..+++++
T Consensus 223 ~~~-~l~~~k--~~aliIDla 240 (287)
T TIGR02853 223 TAD-VLSKLP--KHAVIIDLA 240 (287)
T ss_pred CHH-HHhcCC--CCeEEEEeC
Confidence 222 266777 887888874
No 161
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=96.65 E-value=0.008 Score=53.82 Aligned_cols=139 Identities=17% Similarity=0.068 Sum_probs=82.3
Q ss_pred CCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCC
Q psy9949 119 TDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGAS 198 (383)
Q Consensus 119 ~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~ 198 (383)
+.+++||+++... +|.+|.. +...++++++++++..+.--... . ....+.. .+ .++++||-.| +
T Consensus 65 ~p~~~g~~~~i~p------~~~~~~~-~~~~~i~i~p~~afgtg~h~tt~-~-~l~~l~~--~~----~~~~~VLDiG-c 128 (250)
T PRK00517 65 HPIRIGDRLWIVP------SWEDPPD-PDEINIELDPGMAFGTGTHPTTR-L-CLEALEK--LV----LPGKTVLDVG-C 128 (250)
T ss_pred CCEEEcCCEEEEC------CCcCCCC-CCeEEEEECCCCccCCCCCHHHH-H-HHHHHHh--hc----CCCCEEEEeC-C
Confidence 3467888877663 4666644 77788999998887765522211 1 2223321 23 6889999999 6
Q ss_pred chHHHHHHHHHHHCCC-EEEEEecCc-hHHHHHh----cCC-CeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc--ccc
Q psy9949 199 GGVGTMAVQLLKAWDI-EVVTTCSGD-AKDLVTS----LNP-NLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD--QIN 269 (383)
Q Consensus 199 g~vG~~ai~la~~~G~-~Vi~~~~~~-~~~~~~~----lg~-~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~--~~~ 269 (383)
|. |.+++.+++ .|+ +|++++.++ ..+.+++ .+. +.+.-... ...+|+|+.+...... ...
T Consensus 129 Gs-G~l~i~~~~-~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~~~~---------~~~fD~Vvani~~~~~~~l~~ 197 (250)
T PRK00517 129 GS-GILAIAAAK-LGAKKVLAVDIDPQAVEAARENAELNGVELNVYLPQG---------DLKADVIVANILANPLLELAP 197 (250)
T ss_pred cH-HHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEccC---------CCCcCEEEEcCcHHHHHHHHH
Confidence 65 888776655 566 699998543 3444332 232 11110100 0158999876554322 111
Q ss_pred ccccccccCCCceEEEe
Q psy9949 270 SYLPFLKTGKFSKFVTL 286 (383)
Q Consensus 270 ~~~~~l~~~~~G~~v~~ 286 (383)
.+.++++ ++|+++..
T Consensus 198 ~~~~~Lk--pgG~lils 212 (250)
T PRK00517 198 DLARLLK--PGGRLILS 212 (250)
T ss_pred HHHHhcC--CCcEEEEE
Confidence 1267789 99999986
No 162
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.65 E-value=0.012 Score=54.19 Aligned_cols=76 Identities=28% Similarity=0.352 Sum_probs=52.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcCC--Ce-e--eeCCChHHH----HHHhc-CCCcc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLNP--NL-V--IDYNEPEAM----HSIAG-AGPYD 255 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg~--~~-v--~~~~~~~~~----~~i~~-~~g~d 255 (383)
++++++|+||+|++|..+++.+...|++|++++++.. . +..++++. .. . .|..+.+-. +++.+ .+++|
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 87 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID 87 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999999999999999999999999999986643 3 34444542 11 1 344443222 22222 36799
Q ss_pred EEEEcCCC
Q psy9949 256 VILDAAGI 263 (383)
Q Consensus 256 ~v~d~~g~ 263 (383)
++|+++|.
T Consensus 88 ~vI~nAG~ 95 (296)
T PRK05872 88 VVVANAGI 95 (296)
T ss_pred EEEECCCc
Confidence 99999986
No 163
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=96.59 E-value=0.0065 Score=58.82 Aligned_cols=150 Identities=15% Similarity=0.246 Sum_probs=91.0
Q ss_pred ccccCceeEEEEecCCCCCCCCCCCEEE-E-------------eecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhh
Q psy9949 101 LTLGRDFCGKIVAKGPRVTDLNIDDVVY-G-------------VIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVL 166 (383)
Q Consensus 101 ~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~-~-------------~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~ 166 (383)
.--|||+++.+.+|+++.++.-+|+.-+ + .++...++.|++. +++|+.+..+.+..-
T Consensus 90 ~~~g~ea~~hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~a--------~~~~k~v~~~t~i~~- 160 (423)
T PRK00045 90 VHEGEEAVRHLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQKA--------FSVAKRVRTETGIGA- 160 (423)
T ss_pred hcCCHHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHH--------HHHHhhHhhhcCCCC-
Confidence 3459999999999999988755665532 1 1111112333332 444554443333222
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc-h-HHHHHhcCCCeeeeCCChH
Q psy9949 167 YTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD-A-KDLVTSLNPNLVIDYNEPE 243 (383)
Q Consensus 167 ~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~-~-~~~~~~lg~~~v~~~~~~~ 243 (383)
.+...+++++...... ....++++|+|.| +|.+|.++++.++..|+ +|+++.++. + .+++.++|.+ +++. .+
T Consensus 161 ~~~Sv~~~Av~~a~~~-~~~~~~~~vlViG-aG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~--~~ 235 (423)
T PRK00045 161 GAVSVASAAVELAKQI-FGDLSGKKVLVIG-AGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPL--DE 235 (423)
T ss_pred CCcCHHHHHHHHHHHh-hCCccCCEEEEEC-chHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeH--HH
Confidence 1334456666432221 0003678999999 89999999999999998 788777653 4 3477778764 3332 12
Q ss_pred HHHHHhcCCCccEEEEcCCCCccc
Q psy9949 244 AMHSIAGAGPYDVILDAAGIPLDQ 267 (383)
Q Consensus 244 ~~~~i~~~~g~d~v~d~~g~~~~~ 267 (383)
..+. ..++|+||+|+|.+...
T Consensus 236 ~~~~---l~~aDvVI~aT~s~~~~ 256 (423)
T PRK00045 236 LPEA---LAEADIVISSTGAPHPI 256 (423)
T ss_pred HHHH---hccCCEEEECCCCCCcE
Confidence 2222 24799999999987643
No 164
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.57 E-value=0.013 Score=49.57 Aligned_cols=93 Identities=24% Similarity=0.317 Sum_probs=57.9
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCCCccc--
Q psy9949 192 VLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGIPLDQ-- 267 (383)
Q Consensus 192 VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~-- 267 (383)
|+|+||+|.+|..+++.+...|.+|+++++++. .+. ..+.+.+ .|..+.+.... ...++|.||.+.|.....
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~~~~~~~~~d~~d~~~~~~--al~~~d~vi~~~~~~~~~~~ 76 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--SPGVEIIQGDLFDPDSVKA--ALKGADAVIHAAGPPPKDVD 76 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--CTTEEEEESCTTCHHHHHH--HHTTSSEEEECCHSTTTHHH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--ccccccceeeehhhhhhhh--hhhhcchhhhhhhhhccccc
Confidence 789999999999999999999999999997754 333 3333322 24444322222 235899999999853321
Q ss_pred -ccccccccccCCCceEEEecC
Q psy9949 268 -INSYLPFLKTGKFSKFVTLRS 288 (383)
Q Consensus 268 -~~~~~~~l~~~~~G~~v~~~~ 288 (383)
...+++.++...-.+++.+++
T Consensus 77 ~~~~~~~a~~~~~~~~~v~~s~ 98 (183)
T PF13460_consen 77 AAKNIIEAAKKAGVKRVVYLSS 98 (183)
T ss_dssp HHHHHHHHHHHTTSSEEEEEEE
T ss_pred ccccccccccccccccceeeec
Confidence 111134443112337777654
No 165
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.55 E-value=0.019 Score=52.73 Aligned_cols=77 Identities=23% Similarity=0.438 Sum_probs=51.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHH---hcCCC-ee--eeCCChHHHHHHhc-----CCCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVT---SLNPN-LV--IDYNEPEAMHSIAG-----AGPY 254 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~---~lg~~-~v--~~~~~~~~~~~i~~-----~~g~ 254 (383)
.+++++|+||+|++|..+++.+...|++|++++++. +.+ ... +.+.+ .+ .|..+.+....+.+ .+++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 118 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV 118 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 457899999999999999998888899999999764 222 222 22322 12 34444333322222 3579
Q ss_pred cEEEEcCCCC
Q psy9949 255 DVILDAAGIP 264 (383)
Q Consensus 255 d~v~d~~g~~ 264 (383)
|++|.++|..
T Consensus 119 d~li~~AG~~ 128 (293)
T PRK05866 119 DILINNAGRS 128 (293)
T ss_pred CEEEECCCCC
Confidence 9999999854
No 166
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.43 E-value=0.014 Score=57.92 Aligned_cols=76 Identities=22% Similarity=0.331 Sum_probs=51.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHHh--------cCC-----Cee--eeCCChHHHHHHh
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVTS--------LNP-----NLV--IDYNEPEAMHSIA 249 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~~--------lg~-----~~v--~~~~~~~~~~~i~ 249 (383)
+.+++|+|+||+|++|..+++.+...|++|++++++.. .+ ++.. .|. ..+ .|..+.+... .
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~--~ 155 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIG--P 155 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHH--H
Confidence 68899999999999999999999889999999987643 22 2221 121 112 3444322211 1
Q ss_pred cCCCccEEEEcCCCC
Q psy9949 250 GAGPYDVILDAAGIP 264 (383)
Q Consensus 250 ~~~g~d~v~d~~g~~ 264 (383)
..+++|+||.++|..
T Consensus 156 aLggiDiVVn~AG~~ 170 (576)
T PLN03209 156 ALGNASVVICCIGAS 170 (576)
T ss_pred HhcCCCEEEEccccc
Confidence 236899999999864
No 167
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.02 Score=51.78 Aligned_cols=76 Identities=24% Similarity=0.421 Sum_probs=51.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcC-CCe-eeeCCChHHH----HHHhc-CCCccEEE
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLN-PNL-VIDYNEPEAM----HSIAG-AGPYDVIL 258 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg-~~~-v~~~~~~~~~----~~i~~-~~g~d~v~ 258 (383)
.+.+++|+||+|++|..+++.+...|++|+++.+++ +. +...+++ ... ..|..+.+-. +.+.+ .+++|+++
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 83 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV 83 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 467999999999999999988888899999888654 32 2334444 221 1354443322 22222 36799999
Q ss_pred EcCCC
Q psy9949 259 DAAGI 263 (383)
Q Consensus 259 d~~g~ 263 (383)
.++|.
T Consensus 84 ~~ag~ 88 (273)
T PRK07825 84 NNAGV 88 (273)
T ss_pred ECCCc
Confidence 99985
No 168
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.024 Score=49.94 Aligned_cols=76 Identities=25% Similarity=0.371 Sum_probs=50.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH--HHHH---hcCCCee-eeCCChHHHH----HHhc-CCCccE
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK--DLVT---SLNPNLV-IDYNEPEAMH----SIAG-AGPYDV 256 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~--~~~~---~lg~~~v-~~~~~~~~~~----~i~~-~~g~d~ 256 (383)
+++++||+|++|++|..+++.+...|++|++++++... +... ..+...+ .|..+....+ .+.+ .+++|+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 47899999999999999999988889999999975422 2222 2233221 3444322222 2222 357999
Q ss_pred EEEcCCC
Q psy9949 257 ILDAAGI 263 (383)
Q Consensus 257 v~d~~g~ 263 (383)
+|.++|.
T Consensus 86 vi~~ag~ 92 (239)
T PRK12828 86 LVNIAGA 92 (239)
T ss_pred EEECCcc
Confidence 9999875
No 169
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.38 E-value=0.029 Score=50.36 Aligned_cols=78 Identities=24% Similarity=0.346 Sum_probs=52.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHHhcCCC--e--eeeCCChHHHHHH----h-cCCCcc
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVTSLNPN--L--VIDYNEPEAMHSI----A-GAGPYD 255 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~~lg~~--~--v~~~~~~~~~~~i----~-~~~g~d 255 (383)
-++.++||+||+|++|..++..+...|++|+++.++++ .+ ........ . ..|..+......+ . ..+++|
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 88 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLD 88 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 46789999999999999999999999999999987643 22 22222211 1 1344443322222 1 136899
Q ss_pred EEEEcCCCC
Q psy9949 256 VILDAAGIP 264 (383)
Q Consensus 256 ~v~d~~g~~ 264 (383)
+||.++|..
T Consensus 89 ~vi~~ag~~ 97 (264)
T PRK12829 89 VLVNNAGIA 97 (264)
T ss_pred EEEECCCCC
Confidence 999999865
No 170
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.36 E-value=0.025 Score=50.81 Aligned_cols=77 Identities=23% Similarity=0.309 Sum_probs=51.4
Q ss_pred CCCCEEEEEcCCc-hHHHHHHHHHHHCCCEEEEEecCc-hHHH----HHh-cCCCee----eeCCChHHHHHHh-----c
Q psy9949 187 PRDKRVLVLGASG-GVGTMAVQLLKAWDIEVVTTCSGD-AKDL----VTS-LNPNLV----IDYNEPEAMHSIA-----G 250 (383)
Q Consensus 187 ~~~~~VlI~ga~g-~vG~~ai~la~~~G~~Vi~~~~~~-~~~~----~~~-lg~~~v----~~~~~~~~~~~i~-----~ 250 (383)
.++++++|+||+| ++|.++++.+...|++|+++++++ +.+. +++ ++...+ .|..+.+-.+.+. .
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 94 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER 94 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4578999999886 899999999999999999888654 2221 112 443322 2444433222222 2
Q ss_pred CCCccEEEEcCCC
Q psy9949 251 AGPYDVILDAAGI 263 (383)
Q Consensus 251 ~~g~d~v~d~~g~ 263 (383)
.+++|++|.++|.
T Consensus 95 ~g~id~li~~ag~ 107 (262)
T PRK07831 95 LGRLDVLVNNAGL 107 (262)
T ss_pred cCCCCEEEECCCC
Confidence 3579999999985
No 171
>KOG1199|consensus
Probab=96.32 E-value=0.017 Score=47.32 Aligned_cols=80 Identities=20% Similarity=0.320 Sum_probs=59.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe--cCchHHHHHhcCCCeeeeCCC----hHHHHHHh----cCCCccE
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC--SGDAKDLVTSLNPNLVIDYNE----PEAMHSIA----GAGPYDV 256 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~--~~~~~~~~~~lg~~~v~~~~~----~~~~~~i~----~~~g~d~ 256 (383)
.++-.-+|+|+++++|.+++.-+...|+.|+..+ .+...+.++++|..-++.+.+ ++....+. +.+..|+
T Consensus 7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~ 86 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA 86 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence 4667789999999999999999999999999888 334567889999876765444 22222222 2357899
Q ss_pred EEEcCCCCcc
Q psy9949 257 ILDAAGIPLD 266 (383)
Q Consensus 257 v~d~~g~~~~ 266 (383)
.++|+|....
T Consensus 87 ~vncagia~a 96 (260)
T KOG1199|consen 87 LVNCAGIAYA 96 (260)
T ss_pred eeeccceeee
Confidence 9999998543
No 172
>PRK07904 short chain dehydrogenase; Provisional
Probab=96.32 E-value=0.029 Score=50.29 Aligned_cols=78 Identities=21% Similarity=0.287 Sum_probs=49.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecCch--HH-HH---HhcCCC--ee--eeCCChHH----HHHHhcC
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSGDA--KD-LV---TSLNPN--LV--IDYNEPEA----MHSIAGA 251 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~~~--~~-~~---~~lg~~--~v--~~~~~~~~----~~~i~~~ 251 (383)
..+++|+|+||+|++|..+++-+... |++|+++++++. .+ .. ++.+.. .+ .|..+.+. .+.+.+.
T Consensus 6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 85 (253)
T PRK07904 6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAG 85 (253)
T ss_pred CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhc
Confidence 56789999999999999998876666 489999986532 22 22 233321 22 34444332 2333333
Q ss_pred CCccEEEEcCCCC
Q psy9949 252 GPYDVILDAAGIP 264 (383)
Q Consensus 252 ~g~d~v~d~~g~~ 264 (383)
+++|+++.++|..
T Consensus 86 g~id~li~~ag~~ 98 (253)
T PRK07904 86 GDVDVAIVAFGLL 98 (253)
T ss_pred CCCCEEEEeeecC
Confidence 5799999888763
No 173
>PRK06179 short chain dehydrogenase; Provisional
Probab=96.31 E-value=0.019 Score=51.80 Aligned_cols=76 Identities=26% Similarity=0.375 Sum_probs=50.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCe-eeeCCChHHHHHHh-----cCCCccEEEEcC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNL-VIDYNEPEAMHSIA-----GAGPYDVILDAA 261 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~i~-----~~~g~d~v~d~~ 261 (383)
.+++++|+||+|++|..+++.+...|++|++++++..... ...+... ..|..+.+-.+++. ..+.+|++|.++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~a 81 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAA-PIPGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNA 81 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-ccCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECC
Confidence 4578999999999999999988888999999987642211 1112222 23554433222222 235799999999
Q ss_pred CCC
Q psy9949 262 GIP 264 (383)
Q Consensus 262 g~~ 264 (383)
|..
T Consensus 82 g~~ 84 (270)
T PRK06179 82 GVG 84 (270)
T ss_pred CCC
Confidence 863
No 174
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.30 E-value=0.081 Score=43.46 Aligned_cols=102 Identities=17% Similarity=0.092 Sum_probs=58.7
Q ss_pred HHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHHHhcCCCeeeeCCChHHHHHHhc
Q psy9949 172 AWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLVTSLNPNLVIDYNEPEAMHSIAG 250 (383)
Q Consensus 172 A~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~~~lg~~~v~~~~~~~~~~~i~~ 250 (383)
.+.++.+..++. -.|++++|.| -|-+|..+++.++.+|++|+++..+.- .-.+.--|.. +. .+.+.
T Consensus 9 ~~d~i~r~t~~~---l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~-v~-----~~~~a--- 75 (162)
T PF00670_consen 9 LVDGIMRATNLM---LAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQAAMDGFE-VM-----TLEEA--- 75 (162)
T ss_dssp HHHHHHHHH-S-----TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-E-EE------HHHH---
T ss_pred HHHHHHhcCcee---eCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcE-ec-----CHHHH---
Confidence 334444444441 4789999999 999999999999999999999985543 2223333432 32 12222
Q ss_pred CCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949 251 AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS 288 (383)
Q Consensus 251 ~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~ 288 (383)
....|++|-++|.........++.|+ ++..+..++.
T Consensus 76 ~~~adi~vtaTG~~~vi~~e~~~~mk--dgail~n~Gh 111 (162)
T PF00670_consen 76 LRDADIFVTATGNKDVITGEHFRQMK--DGAILANAGH 111 (162)
T ss_dssp TTT-SEEEE-SSSSSSB-HHHHHHS---TTEEEEESSS
T ss_pred HhhCCEEEECCCCccccCHHHHHHhc--CCeEEeccCc
Confidence 23689999999987753333367777 6656655543
No 175
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.30 E-value=0.052 Score=46.52 Aligned_cols=75 Identities=23% Similarity=0.283 Sum_probs=48.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhc----CCCe-eeeCCC-hHHHHHHhcCCCccEEEE
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSL----NPNL-VIDYNE-PEAMHSIAGAGPYDVILD 259 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~l----g~~~-v~~~~~-~~~~~~i~~~~g~d~v~d 259 (383)
++.+++|.|++|++|..++..+...|++|+.+.++. +. ++...+ +... ..+..+ .+..+. ..++|+||.
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~diVi~ 103 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAA---IKGADVVFA 103 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHH---HhcCCEEEE
Confidence 678999999899999998888888889999888653 22 233333 2221 122222 222222 247899999
Q ss_pred cCCCCc
Q psy9949 260 AAGIPL 265 (383)
Q Consensus 260 ~~g~~~ 265 (383)
+++...
T Consensus 104 at~~g~ 109 (194)
T cd01078 104 AGAAGV 109 (194)
T ss_pred CCCCCc
Confidence 887655
No 176
>PRK08017 oxidoreductase; Provisional
Probab=96.29 E-value=0.025 Score=50.46 Aligned_cols=74 Identities=26% Similarity=0.409 Sum_probs=51.6
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCee-eeCCChHH----HHHHhc--CCCccEEEEcC
Q psy9949 190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLV-IDYNEPEA----MHSIAG--AGPYDVILDAA 261 (383)
Q Consensus 190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v-~~~~~~~~----~~~i~~--~~g~d~v~d~~ 261 (383)
++++|+|++|++|..+++.+...|++|++++++. +.+.+.+.+...+ .|..+.+. .+.+.. .+.+|.++.+.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~a 82 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNA 82 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECC
Confidence 5799999999999999999999999999988654 4455555665433 35544322 222222 14689999988
Q ss_pred CC
Q psy9949 262 GI 263 (383)
Q Consensus 262 g~ 263 (383)
|.
T Consensus 83 g~ 84 (256)
T PRK08017 83 GF 84 (256)
T ss_pred CC
Confidence 74
No 177
>PRK06196 oxidoreductase; Provisional
Probab=96.28 E-value=0.024 Score=52.57 Aligned_cols=76 Identities=17% Similarity=0.333 Sum_probs=51.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcCCCee--eeCCChHHH----HHHhc-CCCccEEE
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLNPNLV--IDYNEPEAM----HSIAG-AGPYDVIL 258 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg~~~v--~~~~~~~~~----~~i~~-~~g~d~v~ 258 (383)
.+++++|+||+|++|..++..+...|++|++++++.+ . +.+.++..... .|..+..-. +.+.+ .+++|++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li 104 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI 104 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 5689999999999999999988889999999987643 2 23333321122 344443322 22222 35799999
Q ss_pred EcCCC
Q psy9949 259 DAAGI 263 (383)
Q Consensus 259 d~~g~ 263 (383)
.++|.
T Consensus 105 ~nAg~ 109 (315)
T PRK06196 105 NNAGV 109 (315)
T ss_pred ECCCC
Confidence 99984
No 178
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.25 E-value=0.099 Score=43.58 Aligned_cols=77 Identities=19% Similarity=0.193 Sum_probs=54.4
Q ss_pred CCCCEEEEEcCCch-HHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc
Q psy9949 187 PRDKRVLVLGASGG-VGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL 265 (383)
Q Consensus 187 ~~~~~VlI~ga~g~-vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~ 265 (383)
-.+.+|+|.| +|. +|..++..++..|++|+.+.+.. .++.+. ...+|+||.+++.+.
T Consensus 42 l~gk~vlViG-~G~~~G~~~a~~L~~~g~~V~v~~r~~------------------~~l~~~---l~~aDiVIsat~~~~ 99 (168)
T cd01080 42 LAGKKVVVVG-RSNIVGKPLAALLLNRNATVTVCHSKT------------------KNLKEH---TKQADIVIVAVGKPG 99 (168)
T ss_pred CCCCEEEEEC-CcHHHHHHHHHHHhhCCCEEEEEECCc------------------hhHHHH---HhhCCEEEEcCCCCc
Confidence 4789999999 565 69989999999999877776541 112222 235899999999987
Q ss_pred ccccccccccccCCCceEEEecCCC
Q psy9949 266 DQINSYLPFLKTGKFSKFVTLRSPF 290 (383)
Q Consensus 266 ~~~~~~~~~l~~~~~G~~v~~~~~~ 290 (383)
. .. .+.++ ++-.+++++.+.
T Consensus 100 i-i~--~~~~~--~~~viIDla~pr 119 (168)
T cd01080 100 L-VK--GDMVK--PGAVVIDVGINR 119 (168)
T ss_pred e-ec--HHHcc--CCeEEEEccCCC
Confidence 3 33 44566 666777776543
No 179
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.25 E-value=0.028 Score=50.53 Aligned_cols=76 Identities=21% Similarity=0.251 Sum_probs=51.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHhcCCC-ee--eeCCChHHHH----HHh-cCCCccEE
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTSLNPN-LV--IDYNEPEAMH----SIA-GAGPYDVI 257 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~lg~~-~v--~~~~~~~~~~----~i~-~~~g~d~v 257 (383)
++++++|+||++++|..+++.+...|++|+.+++++ +.+ ...+++.. .. .|..+....+ .+. ..+.+|++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 84 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF 84 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 578999999999999999999999999999998664 333 33344421 12 2444432222 222 23579999
Q ss_pred EEcCCC
Q psy9949 258 LDAAGI 263 (383)
Q Consensus 258 ~d~~g~ 263 (383)
|.++|.
T Consensus 85 i~~ag~ 90 (263)
T PRK06200 85 VGNAGI 90 (263)
T ss_pred EECCCC
Confidence 999984
No 180
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.033 Score=52.15 Aligned_cols=76 Identities=25% Similarity=0.405 Sum_probs=52.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-H---HHhcCCCee---eeCCChHHHHHHh-----cCCCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-L---VTSLNPNLV---IDYNEPEAMHSIA-----GAGPY 254 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~---~~~lg~~~v---~~~~~~~~~~~i~-----~~~g~ 254 (383)
.+++++|+||+|++|..+++.+...|++|++++++++ .+ . +++.|.... .|..+..-.+.+. ..+++
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i 86 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI 86 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 5679999999999999999999989999999987642 22 2 233454321 3554543333222 23679
Q ss_pred cEEEEcCCC
Q psy9949 255 DVILDAAGI 263 (383)
Q Consensus 255 d~v~d~~g~ 263 (383)
|++|+++|.
T Consensus 87 D~lInnAg~ 95 (334)
T PRK07109 87 DTWVNNAMV 95 (334)
T ss_pred CEEEECCCc
Confidence 999999985
No 181
>KOG1200|consensus
Probab=96.22 E-value=0.036 Score=46.51 Aligned_cols=77 Identities=23% Similarity=0.256 Sum_probs=54.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-c-hHHHHHhcCC--Cee---eeCCChH-----HHHHHhcCCCcc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-D-AKDLVTSLNP--NLV---IDYNEPE-----AMHSIAGAGPYD 255 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~-~~~~~~~lg~--~~v---~~~~~~~-----~~~~i~~~~g~d 255 (383)
..+.++|+||++++|.+..+.+...|++|.+.+.+ . .++.++.++. ++. .|..+.. +.+..+..+.++
T Consensus 13 ~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~ps 92 (256)
T KOG1200|consen 13 MSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPS 92 (256)
T ss_pred hcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCc
Confidence 45678999999999999999999999999999843 3 3456677765 332 2333222 233333457899
Q ss_pred EEEEcCCCC
Q psy9949 256 VILDAAGIP 264 (383)
Q Consensus 256 ~v~d~~g~~ 264 (383)
++++|+|..
T Consensus 93 vlVncAGIt 101 (256)
T KOG1200|consen 93 VLVNCAGIT 101 (256)
T ss_pred EEEEcCccc
Confidence 999999974
No 182
>PRK06483 dihydromonapterin reductase; Provisional
Probab=96.21 E-value=0.032 Score=49.26 Aligned_cols=75 Identities=15% Similarity=0.170 Sum_probs=50.3
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch--HHHHHhcCCCee-eeCCChH----HHHHHhc-CCCccEEEEc
Q psy9949 189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA--KDLVTSLNPNLV-IDYNEPE----AMHSIAG-AGPYDVILDA 260 (383)
Q Consensus 189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~--~~~~~~lg~~~v-~~~~~~~----~~~~i~~-~~g~d~v~d~ 260 (383)
+++++|+||+|++|..+++.+...|++|++++++.. .+.+++.+...+ .|..+.+ +.+.+.+ .+++|+++.+
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ 81 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN 81 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence 468999999999999999988889999999986542 233344453222 3433322 2222222 3569999999
Q ss_pred CCC
Q psy9949 261 AGI 263 (383)
Q Consensus 261 ~g~ 263 (383)
+|.
T Consensus 82 ag~ 84 (236)
T PRK06483 82 ASD 84 (236)
T ss_pred Ccc
Confidence 885
No 183
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.20 E-value=0.036 Score=49.23 Aligned_cols=76 Identities=24% Similarity=0.310 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcCCCe-e--eeCCChHHH----HHHhc-CCCccEE
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLNPNL-V--IDYNEPEAM----HSIAG-AGPYDVI 257 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg~~~-v--~~~~~~~~~----~~i~~-~~g~d~v 257 (383)
++++++|+||+|++|..+++.+...|++|+++++++. . +..++++... . .|..+..-. +.+.+ .+++|++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 5679999999999999999999999999999987643 2 3334555431 1 233332222 22222 3579999
Q ss_pred EEcCCC
Q psy9949 258 LDAAGI 263 (383)
Q Consensus 258 ~d~~g~ 263 (383)
|.++|.
T Consensus 85 i~~ag~ 90 (249)
T PRK06500 85 FINAGV 90 (249)
T ss_pred EECCCC
Confidence 999885
No 184
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.20 E-value=0.025 Score=50.55 Aligned_cols=76 Identities=22% Similarity=0.341 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH---HHHHhcCCCe-e--eeCCChHHHHHHh-----cCCCccE
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK---DLVTSLNPNL-V--IDYNEPEAMHSIA-----GAGPYDV 256 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~---~~~~~lg~~~-v--~~~~~~~~~~~i~-----~~~g~d~ 256 (383)
.+++++|+||++++|.++++.+...|++|+++.+++.. +..++.+... . .|..+.+-.+.+. ..+++|+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~ 86 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI 86 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 57899999999999999999998999999988754322 2333444321 1 3544433232222 2367999
Q ss_pred EEEcCCC
Q psy9949 257 ILDAAGI 263 (383)
Q Consensus 257 v~d~~g~ 263 (383)
++.++|.
T Consensus 87 lv~~ag~ 93 (251)
T PRK12481 87 LINNAGI 93 (251)
T ss_pred EEECCCc
Confidence 9999885
No 185
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.18 E-value=0.028 Score=51.02 Aligned_cols=77 Identities=27% Similarity=0.358 Sum_probs=51.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHh-cCCC-ee--eeCCChHHHHHHh-----cCCCccEE
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTS-LNPN-LV--IDYNEPEAMHSIA-----GAGPYDVI 257 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~-lg~~-~v--~~~~~~~~~~~i~-----~~~g~d~v 257 (383)
.+++++|+||+|++|..+++.+...|++|++++++. +.+.+.+ .+.. .. .|..+.+....+. ..+++|++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v 82 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL 82 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 457899999999999999999888899999999754 3333222 2221 11 3444433222221 13579999
Q ss_pred EEcCCCC
Q psy9949 258 LDAAGIP 264 (383)
Q Consensus 258 ~d~~g~~ 264 (383)
|.++|..
T Consensus 83 v~~ag~~ 89 (277)
T PRK06180 83 VNNAGYG 89 (277)
T ss_pred EECCCcc
Confidence 9999863
No 186
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.16 E-value=0.032 Score=50.16 Aligned_cols=76 Identities=20% Similarity=0.231 Sum_probs=50.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHH-HhcCCC-ee--eeCCChHHH-H---HHh-cCCCccEE
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLV-TSLNPN-LV--IDYNEPEAM-H---SIA-GAGPYDVI 257 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~-~~lg~~-~v--~~~~~~~~~-~---~i~-~~~g~d~v 257 (383)
++++++|+||+|++|..+++.+...|++|+++.++. +.+.+ ...+.. .. .|..+.+-. + ++. ..+.+|++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 83 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL 83 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 578999999999999999999988999999988654 33322 223321 11 244443222 1 222 23679999
Q ss_pred EEcCCC
Q psy9949 258 LDAAGI 263 (383)
Q Consensus 258 ~d~~g~ 263 (383)
|.++|.
T Consensus 84 i~~Ag~ 89 (262)
T TIGR03325 84 IPNAGI 89 (262)
T ss_pred EECCCC
Confidence 999874
No 187
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.14 E-value=0.041 Score=48.92 Aligned_cols=76 Identities=17% Similarity=0.314 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-H---HHhcCCCe-e--eeCCChHHHHHH----hc-CCCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-L---VTSLNPNL-V--IDYNEPEAMHSI----AG-AGPY 254 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~---~~~lg~~~-v--~~~~~~~~~~~i----~~-~~g~ 254 (383)
++++++|+|++|++|..+++.+...|++|+.++++.. .+ . .+..+... . .|..+....+.+ .+ .+++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999999989999999886642 22 2 22334331 1 333332222222 11 2568
Q ss_pred cEEEEcCCC
Q psy9949 255 DVILDAAGI 263 (383)
Q Consensus 255 d~v~d~~g~ 263 (383)
|++|.++|.
T Consensus 84 d~vi~~ag~ 92 (253)
T PRK08217 84 NGLINNAGI 92 (253)
T ss_pred CEEEECCCc
Confidence 999999884
No 188
>KOG1201|consensus
Probab=96.14 E-value=0.034 Score=49.98 Aligned_cols=78 Identities=15% Similarity=0.276 Sum_probs=52.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-c-hH---HHHHhcCC--CeeeeCCCh----HHHHHHhc-CCCc
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-D-AK---DLVTSLNP--NLVIDYNEP----EAMHSIAG-AGPY 254 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~-~~---~~~~~lg~--~~v~~~~~~----~~~~~i~~-~~g~ 254 (383)
-.|+.|||+||++|+|.+.++=...+|++++..+-+ + .. +..++.|- .++.|-.+. ...+++++ .+.+
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V 115 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDV 115 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCc
Confidence 368999999999999998877777789977777733 2 23 34444452 133444442 23344443 4789
Q ss_pred cEEEEcCCCC
Q psy9949 255 DVILDAAGIP 264 (383)
Q Consensus 255 d~v~d~~g~~ 264 (383)
|++++++|.-
T Consensus 116 ~ILVNNAGI~ 125 (300)
T KOG1201|consen 116 DILVNNAGIV 125 (300)
T ss_pred eEEEeccccc
Confidence 9999999974
No 189
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.13 E-value=0.035 Score=48.66 Aligned_cols=74 Identities=26% Similarity=0.452 Sum_probs=49.5
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCee--eeCCChHHHHHHhc---CCCccEEEEcCCC
Q psy9949 190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLV--IDYNEPEAMHSIAG---AGPYDVILDAAGI 263 (383)
Q Consensus 190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v--~~~~~~~~~~~i~~---~~g~d~v~d~~g~ 263 (383)
++++|+|++|++|..++..+...|++|++++++. +.+.+++++...+ .|..+.+....+.+ .+++|++|.++|.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag~ 81 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGI 81 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCcc
Confidence 4799999999999999888888899999999654 3333333332222 34444332323222 2479999999875
No 190
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.13 E-value=0.038 Score=46.69 Aligned_cols=87 Identities=18% Similarity=0.221 Sum_probs=57.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHH-HHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc-
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDL-VTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL- 265 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~- 265 (383)
.+++|.|+| .|.+|..+++.++.+|++|++.++..+... ....+.. +. ++.+-+. ..|+|+.+.....
T Consensus 35 ~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~----~~--~l~ell~---~aDiv~~~~plt~~ 104 (178)
T PF02826_consen 35 RGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVE----YV--SLDELLA---QADIVSLHLPLTPE 104 (178)
T ss_dssp TTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEE----ES--SHHHHHH---H-SEEEE-SSSSTT
T ss_pred CCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhcccccce----ee--ehhhhcc---hhhhhhhhhccccc
Confidence 589999999 999999999999999999999997765443 4455531 11 1232222 4899988776322
Q ss_pred ---ccccccccccccCCCceEEEe
Q psy9949 266 ---DQINSYLPFLKTGKFSKFVTL 286 (383)
Q Consensus 266 ---~~~~~~~~~l~~~~~G~~v~~ 286 (383)
......++.++ ++..+|.+
T Consensus 105 T~~li~~~~l~~mk--~ga~lvN~ 126 (178)
T PF02826_consen 105 TRGLINAEFLAKMK--PGAVLVNV 126 (178)
T ss_dssp TTTSBSHHHHHTST--TTEEEEES
T ss_pred cceeeeeeeeeccc--cceEEEec
Confidence 11222267778 88888876
No 191
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.13 E-value=0.04 Score=49.51 Aligned_cols=76 Identities=18% Similarity=0.232 Sum_probs=52.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcCCC-ee--eeCCChHHHH----HHh-cCCCccEE
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLNPN-LV--IDYNEPEAMH----SIA-GAGPYDVI 257 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg~~-~v--~~~~~~~~~~----~i~-~~~g~d~v 257 (383)
.+++++|+||+|++|..++..+...|++|++++++.+ . +..++++.. .. .|..+.+-.. .+. ..+.+|++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 84 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL 84 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 5689999999999999999999889999999986643 3 344455432 11 3444432222 222 23579999
Q ss_pred EEcCCC
Q psy9949 258 LDAAGI 263 (383)
Q Consensus 258 ~d~~g~ 263 (383)
|.++|.
T Consensus 85 v~~ag~ 90 (261)
T PRK08265 85 VNLACT 90 (261)
T ss_pred EECCCC
Confidence 999885
No 192
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.12 E-value=0.026 Score=50.89 Aligned_cols=76 Identities=22% Similarity=0.312 Sum_probs=50.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HH---HHhcCCC-ee--eeCCChHHHHHH-h----cCCCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DL---VTSLNPN-LV--IDYNEPEAMHSI-A----GAGPY 254 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~---~~~lg~~-~v--~~~~~~~~~~~i-~----~~~g~ 254 (383)
++++++|+||+|++|..+++.+...|++|++++++.+ . +. ..+.+.. .. .|..+.+-..+. . ..+++
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i 87 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI 87 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 6789999999999999999999899999999986542 2 22 2222322 11 344443322222 1 23579
Q ss_pred cEEEEcCCC
Q psy9949 255 DVILDAAGI 263 (383)
Q Consensus 255 d~v~d~~g~ 263 (383)
|++|.++|.
T Consensus 88 D~vi~~ag~ 96 (264)
T PRK07576 88 DVLVSGAAG 96 (264)
T ss_pred CEEEECCCC
Confidence 999998874
No 193
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.12 E-value=0.041 Score=49.61 Aligned_cols=76 Identities=16% Similarity=0.229 Sum_probs=51.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHhc----CCC-ee--eeCCChH----HHHHHhcCCCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTSL----NPN-LV--IDYNEPE----AMHSIAGAGPY 254 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~l----g~~-~v--~~~~~~~----~~~~i~~~~g~ 254 (383)
.+++++|+||++++|.++++.+...|++|++++++. +.+ ...++ +.. .. .|..+.+ +.+.+.+.+++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i 86 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP 86 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence 578999999999999999999999999999988653 322 22221 322 11 3444432 22233334679
Q ss_pred cEEEEcCCC
Q psy9949 255 DVILDAAGI 263 (383)
Q Consensus 255 d~v~d~~g~ 263 (383)
|+++.++|.
T Consensus 87 D~lv~nag~ 95 (263)
T PRK08339 87 DIFFFSTGG 95 (263)
T ss_pred cEEEECCCC
Confidence 999999985
No 194
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.12 E-value=0.036 Score=50.26 Aligned_cols=76 Identities=25% Similarity=0.388 Sum_probs=51.0
Q ss_pred CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEecCch-H----HHHHhcCCCee--eeCCChHHH----HHHhc-CCC
Q psy9949 188 RDKRVLVLGASG--GVGTMAVQLLKAWDIEVVTTCSGDA-K----DLVTSLNPNLV--IDYNEPEAM----HSIAG-AGP 253 (383)
Q Consensus 188 ~~~~VlI~ga~g--~vG~~ai~la~~~G~~Vi~~~~~~~-~----~~~~~lg~~~v--~~~~~~~~~----~~i~~-~~g 253 (383)
+++++||+||++ ++|.++++.+...|++|+.+.++++ . ++.+++|.... .|..+.+-. +.+.+ .+.
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK 85 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 578999999886 9999999999889999998876532 1 22234453322 344443322 22222 367
Q ss_pred ccEEEEcCCC
Q psy9949 254 YDVILDAAGI 263 (383)
Q Consensus 254 ~d~v~d~~g~ 263 (383)
+|++++++|.
T Consensus 86 iD~lVnnAG~ 95 (271)
T PRK06505 86 LDFVVHAIGF 95 (271)
T ss_pred CCEEEECCcc
Confidence 9999999985
No 195
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.11 E-value=0.03 Score=50.36 Aligned_cols=76 Identities=22% Similarity=0.370 Sum_probs=51.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHH---hcCCC-ee--eeCCChHHHHHHh-----cCCCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVT---SLNPN-LV--IDYNEPEAMHSIA-----GAGPY 254 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~---~lg~~-~v--~~~~~~~~~~~i~-----~~~g~ 254 (383)
++++++|+||+|++|..+++.+...|++|++++++.+ .+ +.. +.+.. .+ .|..+.....++. ..+++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 88 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL 88 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999999889999999987542 22 222 22322 22 3555544332222 23579
Q ss_pred cEEEEcCCC
Q psy9949 255 DVILDAAGI 263 (383)
Q Consensus 255 d~v~d~~g~ 263 (383)
|++|.++|.
T Consensus 89 d~vi~~Ag~ 97 (263)
T PRK07814 89 DIVVNNVGG 97 (263)
T ss_pred CEEEECCCC
Confidence 999999884
No 196
>PRK07856 short chain dehydrogenase; Provisional
Probab=96.05 E-value=0.027 Score=50.33 Aligned_cols=75 Identities=24% Similarity=0.366 Sum_probs=49.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCe-eeeCCChHHHH----HHhc-CCCccEEEEcC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNL-VIDYNEPEAMH----SIAG-AGPYDVILDAA 261 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~-v~~~~~~~~~~----~i~~-~~g~d~v~d~~ 261 (383)
.+++++|+||+|++|..+++.+...|++|+.++++.... ........ ..|..+..-.+ .+.+ .+.+|++|.++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~a 83 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPET-VDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNA 83 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhh-hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 578999999999999999999988999999998764321 11111111 13444432222 2222 35789999999
Q ss_pred CC
Q psy9949 262 GI 263 (383)
Q Consensus 262 g~ 263 (383)
|.
T Consensus 84 g~ 85 (252)
T PRK07856 84 GG 85 (252)
T ss_pred CC
Confidence 85
No 197
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=96.02 E-value=0.035 Score=49.30 Aligned_cols=76 Identities=28% Similarity=0.378 Sum_probs=51.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH---HHHHhcCCC-ee--eeCCChHHHH----HHh-cCCCccE
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK---DLVTSLNPN-LV--IDYNEPEAMH----SIA-GAGPYDV 256 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~---~~~~~lg~~-~v--~~~~~~~~~~----~i~-~~~g~d~ 256 (383)
.+++++|+||+|++|..++..+...|++|+++++++.. +...+.+.. .+ .|..+.+-.. .+. ..+++|+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 83 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 57899999999999999999998899999999875422 233344432 12 3444432222 222 2357999
Q ss_pred EEEcCCC
Q psy9949 257 ILDAAGI 263 (383)
Q Consensus 257 v~d~~g~ 263 (383)
++.++|.
T Consensus 84 li~~ag~ 90 (248)
T TIGR01832 84 LVNNAGI 90 (248)
T ss_pred EEECCCC
Confidence 9999885
No 198
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.01 E-value=0.05 Score=48.75 Aligned_cols=75 Identities=28% Similarity=0.411 Sum_probs=50.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHHhcC-CC-e--eeeCCChHHHHH----Hhc--CCCccEE
Q psy9949 190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVTSLN-PN-L--VIDYNEPEAMHS----IAG--AGPYDVI 257 (383)
Q Consensus 190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~~lg-~~-~--v~~~~~~~~~~~----i~~--~~g~d~v 257 (383)
+++||+||+|++|..+++.+...|++|++++++.+ .+ +...++ .. . ..|..+.+...+ +.+ .+++|++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v 81 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL 81 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence 47999999999999999988888999999986543 32 333332 11 1 135444332222 211 3579999
Q ss_pred EEcCCCC
Q psy9949 258 LDAAGIP 264 (383)
Q Consensus 258 ~d~~g~~ 264 (383)
+.++|..
T Consensus 82 i~~ag~~ 88 (260)
T PRK08267 82 FNNAGIL 88 (260)
T ss_pred EECCCCC
Confidence 9999864
No 199
>PRK05854 short chain dehydrogenase; Provisional
Probab=96.01 E-value=0.038 Score=51.28 Aligned_cols=76 Identities=24% Similarity=0.360 Sum_probs=50.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHh----cC-CC-ee--eeCCChH----HHHHHhc-CC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTS----LN-PN-LV--IDYNEPE----AMHSIAG-AG 252 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~----lg-~~-~v--~~~~~~~----~~~~i~~-~~ 252 (383)
.+++++|+||++++|..++..+...|++|+.++++++ . +...+ .+ .. .+ .|..+.+ +.+.+.+ .+
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~ 92 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR 92 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 5789999999999999999988889999999997643 2 22221 11 11 11 3544433 2233322 35
Q ss_pred CccEEEEcCCC
Q psy9949 253 PYDVILDAAGI 263 (383)
Q Consensus 253 g~d~v~d~~g~ 263 (383)
.+|++|+++|.
T Consensus 93 ~iD~li~nAG~ 103 (313)
T PRK05854 93 PIHLLINNAGV 103 (313)
T ss_pred CccEEEECCcc
Confidence 79999999885
No 200
>PRK06523 short chain dehydrogenase; Provisional
Probab=96.01 E-value=0.017 Score=51.80 Aligned_cols=74 Identities=27% Similarity=0.379 Sum_probs=49.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCe-eeeCCChHHHH----HHh-cCCCccEEEEcC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNL-VIDYNEPEAMH----SIA-GAGPYDVILDAA 261 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~-v~~~~~~~~~~----~i~-~~~g~d~v~d~~ 261 (383)
++++++|+|++|++|..+++.+...|++|++++++....... .... ..|..+.+-.+ ++. ..+++|++|+++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~a 85 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDLPE--GVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVL 85 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhcCC--ceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 578999999999999999999888999999998764332111 1111 13444433222 222 236799999999
Q ss_pred CC
Q psy9949 262 GI 263 (383)
Q Consensus 262 g~ 263 (383)
|.
T Consensus 86 g~ 87 (260)
T PRK06523 86 GG 87 (260)
T ss_pred cc
Confidence 84
No 201
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=96.00 E-value=0.036 Score=51.58 Aligned_cols=76 Identities=22% Similarity=0.392 Sum_probs=50.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcC---CC-ee--eeCCChHHHH----HHhcC-CCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLN---PN-LV--IDYNEPEAMH----SIAGA-GPY 254 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg---~~-~v--~~~~~~~~~~----~i~~~-~g~ 254 (383)
.+++++|+||+|++|..+++.+...|++|++++++.. . +...++. .. .+ .|..+..... .+.+. +++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 5789999999999999999988888999999986643 2 2333332 11 11 3444433222 22222 469
Q ss_pred cEEEEcCCC
Q psy9949 255 DVILDAAGI 263 (383)
Q Consensus 255 d~v~d~~g~ 263 (383)
|++|+++|.
T Consensus 85 D~li~nAg~ 93 (322)
T PRK07453 85 DALVCNAAV 93 (322)
T ss_pred cEEEECCcc
Confidence 999999883
No 202
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.00 E-value=0.046 Score=48.89 Aligned_cols=76 Identities=17% Similarity=0.264 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-h-HHHHHhcCCCee-eeCCChHHHHHH----h-cCCCccEEEE
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-A-KDLVTSLNPNLV-IDYNEPEAMHSI----A-GAGPYDVILD 259 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~-~~~~~~lg~~~v-~~~~~~~~~~~i----~-~~~g~d~v~d 259 (383)
.+++++|+||+|++|..+++.+...|++|+.+.+.. + .+.+.+.+...+ .|..+..-.+.+ . ..+++|++|.
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~ 85 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVN 85 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 568999999999999999999988999998876432 2 223333333222 344443322222 2 2357999999
Q ss_pred cCCC
Q psy9949 260 AAGI 263 (383)
Q Consensus 260 ~~g~ 263 (383)
++|.
T Consensus 86 ~ag~ 89 (255)
T PRK06463 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 9876
No 203
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.99 E-value=0.047 Score=49.01 Aligned_cols=76 Identities=25% Similarity=0.382 Sum_probs=50.1
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecCch-H----HHHHhcCCCee--eeCCChH----HHHHHhc-CCC
Q psy9949 188 RDKRVLVLGAS--GGVGTMAVQLLKAWDIEVVTTCSGDA-K----DLVTSLNPNLV--IDYNEPE----AMHSIAG-AGP 253 (383)
Q Consensus 188 ~~~~VlI~ga~--g~vG~~ai~la~~~G~~Vi~~~~~~~-~----~~~~~lg~~~v--~~~~~~~----~~~~i~~-~~g 253 (383)
++++++|+||+ +++|.++++.+...|++|+.+.++++ . +..++++.... .|..+.. +.+.+.+ .+.
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 88 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR 88 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence 57899999987 49999999988889999998886542 1 22334443222 2433322 2223322 367
Q ss_pred ccEEEEcCCC
Q psy9949 254 YDVILDAAGI 263 (383)
Q Consensus 254 ~d~v~d~~g~ 263 (383)
+|++|.++|.
T Consensus 89 ld~lv~nAg~ 98 (258)
T PRK07533 89 LDFLLHSIAF 98 (258)
T ss_pred CCEEEEcCcc
Confidence 9999999875
No 204
>PRK06841 short chain dehydrogenase; Provisional
Probab=95.98 E-value=0.051 Score=48.50 Aligned_cols=76 Identities=18% Similarity=0.340 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH-HHHHhcCCCe--e--eeCCChHHHH----HHhc-CCCccEE
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNL--V--IDYNEPEAMH----SIAG-AGPYDVI 257 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~-~~~~~lg~~~--v--~~~~~~~~~~----~i~~-~~g~d~v 257 (383)
.+++++|+||+|++|..+++.+...|++|+.++++.+. +...++.... . .|..+..-.+ .+.+ .+++|++
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~v 93 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDIL 93 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 56799999999999999998888899999999876543 2333322111 2 3433322111 2211 2579999
Q ss_pred EEcCCC
Q psy9949 258 LDAAGI 263 (383)
Q Consensus 258 ~d~~g~ 263 (383)
|.++|.
T Consensus 94 i~~ag~ 99 (255)
T PRK06841 94 VNSAGV 99 (255)
T ss_pred EECCCC
Confidence 999985
No 205
>PRK07478 short chain dehydrogenase; Provisional
Probab=95.98 E-value=0.059 Score=48.11 Aligned_cols=76 Identities=22% Similarity=0.301 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-H---HHhcCCCe-e--eeCCChHHHH----HHh-cCCCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-L---VTSLNPNL-V--IDYNEPEAMH----SIA-GAGPY 254 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~---~~~lg~~~-v--~~~~~~~~~~----~i~-~~~g~ 254 (383)
.+++++|+||+|++|..++..+...|++|+.+++++ +.+ . +++.+... . .|..+.+-.+ .+. +.+.+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 467999999999999999998888999999998654 322 2 22334321 1 2444433222 222 23579
Q ss_pred cEEEEcCCC
Q psy9949 255 DVILDAAGI 263 (383)
Q Consensus 255 d~v~d~~g~ 263 (383)
|++|.++|.
T Consensus 85 d~li~~ag~ 93 (254)
T PRK07478 85 DIAFNNAGT 93 (254)
T ss_pred CEEEECCCC
Confidence 999999985
No 206
>PRK07063 short chain dehydrogenase; Provisional
Probab=95.95 E-value=0.037 Score=49.59 Aligned_cols=76 Identities=24% Similarity=0.369 Sum_probs=50.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhc-----CCC-ee--eeCCChHHHH----HHh-cCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSL-----NPN-LV--IDYNEPEAMH----SIA-GAG 252 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~l-----g~~-~v--~~~~~~~~~~----~i~-~~~ 252 (383)
.+++++|+|++|++|..+++.+...|++|+.++++++ . +...++ +.. .+ .|..+..-.. .+. ..+
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 85 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG 85 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 5689999999999999999999999999999886542 2 222222 211 11 2444432222 222 236
Q ss_pred CccEEEEcCCC
Q psy9949 253 PYDVILDAAGI 263 (383)
Q Consensus 253 g~d~v~d~~g~ 263 (383)
++|++|.++|.
T Consensus 86 ~id~li~~ag~ 96 (260)
T PRK07063 86 PLDVLVNNAGI 96 (260)
T ss_pred CCcEEEECCCc
Confidence 79999999985
No 207
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.94 E-value=0.051 Score=53.19 Aligned_cols=76 Identities=28% Similarity=0.389 Sum_probs=53.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH----HHHHhcCCCee-eeCCChHHHHHHh----c-CCCccEE
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK----DLVTSLNPNLV-IDYNEPEAMHSIA----G-AGPYDVI 257 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~----~~~~~lg~~~v-~~~~~~~~~~~i~----~-~~g~d~v 257 (383)
++++++|+|++|++|..+++.+...|++|+++.++... +...+++...+ .|..+.+..+.+. + .+++|++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v 288 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV 288 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 47899999999999999999999999999998864321 23345554333 4655544333332 2 3479999
Q ss_pred EEcCCC
Q psy9949 258 LDAAGI 263 (383)
Q Consensus 258 ~d~~g~ 263 (383)
|.++|.
T Consensus 289 i~~AG~ 294 (450)
T PRK08261 289 VHNAGI 294 (450)
T ss_pred EECCCc
Confidence 999985
No 208
>PRK05717 oxidoreductase; Validated
Probab=95.93 E-value=0.054 Score=48.42 Aligned_cols=78 Identities=22% Similarity=0.262 Sum_probs=52.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCCC-ee--eeCCChHHH----HHHh-cCCCccE
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNPN-LV--IDYNEPEAM----HSIA-GAGPYDV 256 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~~-~v--~~~~~~~~~----~~i~-~~~g~d~ 256 (383)
.++++++|+||+|++|..++..+...|++|+.++++. +. +...+++.. .. .|..+.+-. +.+. ..+.+|+
T Consensus 8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 87 (255)
T PRK05717 8 HNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA 87 (255)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4678999999999999999998888899999987553 22 333444432 11 344443322 2222 2357999
Q ss_pred EEEcCCCC
Q psy9949 257 ILDAAGIP 264 (383)
Q Consensus 257 v~d~~g~~ 264 (383)
+|.++|..
T Consensus 88 li~~ag~~ 95 (255)
T PRK05717 88 LVCNAAIA 95 (255)
T ss_pred EEECCCcc
Confidence 99999853
No 209
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.93 E-value=0.037 Score=49.61 Aligned_cols=76 Identities=22% Similarity=0.370 Sum_probs=51.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHH----HHHhcCCC-ee--eeCCChHHHHH----Hhc-CCCcc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKD----LVTSLNPN-LV--IDYNEPEAMHS----IAG-AGPYD 255 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~----~~~~lg~~-~v--~~~~~~~~~~~----i~~-~~g~d 255 (383)
.++++||+||+|++|..+++.+...|++|++++++++.+ ...+.+.. .. .|..+.+..+. +.+ .+++|
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id 93 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKID 93 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 578999999999999999999999999999998664332 22233432 11 34444332222 222 35799
Q ss_pred EEEEcCCC
Q psy9949 256 VILDAAGI 263 (383)
Q Consensus 256 ~v~d~~g~ 263 (383)
++|.++|.
T Consensus 94 ~li~~ag~ 101 (258)
T PRK06935 94 ILVNNAGT 101 (258)
T ss_pred EEEECCCC
Confidence 99999885
No 210
>PRK12939 short chain dehydrogenase; Provisional
Probab=95.92 E-value=0.076 Score=47.11 Aligned_cols=77 Identities=25% Similarity=0.322 Sum_probs=51.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHH---HhcCCC-ee--eeCCChHHHHHHhc-----CCC
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLV---TSLNPN-LV--IDYNEPEAMHSIAG-----AGP 253 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~---~~lg~~-~v--~~~~~~~~~~~i~~-----~~g 253 (383)
-++++++|+|++|++|..++..+...|++|+++.++++ . +.. ++.+.. .+ .|..+....+.+.+ .++
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG 84 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 35789999999999999999999889999999886543 2 222 223322 12 24444333322221 257
Q ss_pred ccEEEEcCCC
Q psy9949 254 YDVILDAAGI 263 (383)
Q Consensus 254 ~d~v~d~~g~ 263 (383)
+|++|.++|.
T Consensus 85 id~vi~~ag~ 94 (250)
T PRK12939 85 LDGLVNNAGI 94 (250)
T ss_pred CCEEEECCCC
Confidence 9999999986
No 211
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.92 E-value=0.059 Score=48.24 Aligned_cols=76 Identities=21% Similarity=0.319 Sum_probs=51.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HH---HHhcCCCee---eeCCChHHHHHH----h-cCCCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DL---VTSLNPNLV---IDYNEPEAMHSI----A-GAGPY 254 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~---~~~lg~~~v---~~~~~~~~~~~i----~-~~~g~ 254 (383)
+++++||+|++|++|..++..+...|++|+++++++. . +. .++.+.... .|..+.+..+.+ . ..+++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 85 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV 85 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999999999999998886642 2 22 233443321 244443322222 1 12569
Q ss_pred cEEEEcCCC
Q psy9949 255 DVILDAAGI 263 (383)
Q Consensus 255 d~v~d~~g~ 263 (383)
|++|.++|.
T Consensus 86 d~vi~~ag~ 94 (262)
T PRK13394 86 DILVSNAGI 94 (262)
T ss_pred CEEEECCcc
Confidence 999999985
No 212
>PRK08589 short chain dehydrogenase; Validated
Probab=95.91 E-value=0.061 Score=48.67 Aligned_cols=76 Identities=24% Similarity=0.327 Sum_probs=51.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHH-HHH---hcCCC-e--eeeCCChHHH----HHHhc-CCCcc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKD-LVT---SLNPN-L--VIDYNEPEAM----HSIAG-AGPYD 255 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~-~~~---~lg~~-~--v~~~~~~~~~----~~i~~-~~g~d 255 (383)
+++++||+||++++|..+++.+...|++|++++++++.+ .+. +.+.. . ..|..+..-. +.+.+ .+.+|
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id 84 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVD 84 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCcC
Confidence 578999999999999999988888899999999764332 222 22322 1 1344443322 22222 36799
Q ss_pred EEEEcCCC
Q psy9949 256 VILDAAGI 263 (383)
Q Consensus 256 ~v~d~~g~ 263 (383)
++|.++|.
T Consensus 85 ~li~~Ag~ 92 (272)
T PRK08589 85 VLFNNAGV 92 (272)
T ss_pred EEEECCCC
Confidence 99999885
No 213
>PRK05867 short chain dehydrogenase; Provisional
Probab=95.91 E-value=0.056 Score=48.26 Aligned_cols=76 Identities=22% Similarity=0.301 Sum_probs=50.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHH---hcCCCe-e--eeCCChHHHH----HHh-cCCCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVT---SLNPNL-V--IDYNEPEAMH----SIA-GAGPY 254 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~---~lg~~~-v--~~~~~~~~~~----~i~-~~~g~ 254 (383)
.+++++|+|++|++|..+++.+...|++|+++.++. +.+ ... ..+... . .|..+.+-.+ ++. ..+++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 578999999999999999999999999999988654 222 222 223221 1 3444433222 222 23679
Q ss_pred cEEEEcCCC
Q psy9949 255 DVILDAAGI 263 (383)
Q Consensus 255 d~v~d~~g~ 263 (383)
|++|.++|.
T Consensus 88 d~lv~~ag~ 96 (253)
T PRK05867 88 DIAVCNAGI 96 (253)
T ss_pred CEEEECCCC
Confidence 999999885
No 214
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.90 E-value=0.045 Score=48.92 Aligned_cols=76 Identities=24% Similarity=0.309 Sum_probs=50.2
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecCchH-HHHHhcCCC--ee--eeCCChH----HHHHHhc-CCCcc
Q psy9949 188 RDKRVLVLGAS--GGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPN--LV--IDYNEPE----AMHSIAG-AGPYD 255 (383)
Q Consensus 188 ~~~~VlI~ga~--g~vG~~ai~la~~~G~~Vi~~~~~~~~-~~~~~lg~~--~v--~~~~~~~----~~~~i~~-~~g~d 255 (383)
.+++++|+||+ +++|.++++.+...|++|+.+.++++. +.++++... .. .|..+.. +.+.+.+ .+.+|
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD 85 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKID 85 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence 57899999988 799999998888899999998866432 233333211 11 3444332 2222322 36799
Q ss_pred EEEEcCCC
Q psy9949 256 VILDAAGI 263 (383)
Q Consensus 256 ~v~d~~g~ 263 (383)
++++++|.
T Consensus 86 ~lv~nAg~ 93 (252)
T PRK06079 86 GIVHAIAY 93 (252)
T ss_pred EEEEcccc
Confidence 99999884
No 215
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.89 E-value=0.06 Score=48.90 Aligned_cols=76 Identities=20% Similarity=0.322 Sum_probs=51.3
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecCch----H-HHHHhcCCCee--eeCCChHHH----HHHhc-CCC
Q psy9949 188 RDKRVLVLGAS--GGVGTMAVQLLKAWDIEVVTTCSGDA----K-DLVTSLNPNLV--IDYNEPEAM----HSIAG-AGP 253 (383)
Q Consensus 188 ~~~~VlI~ga~--g~vG~~ai~la~~~G~~Vi~~~~~~~----~-~~~~~lg~~~v--~~~~~~~~~----~~i~~-~~g 253 (383)
.+++++|+||+ +++|+++++.+...|++|+.+.++++ . +...+++.... .|..+.+-. +.+.+ .+.
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~ 83 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK 83 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 57899999986 79999999988889999998886542 1 22234453322 344443322 22222 367
Q ss_pred ccEEEEcCCC
Q psy9949 254 YDVILDAAGI 263 (383)
Q Consensus 254 ~d~v~d~~g~ 263 (383)
+|++|+++|.
T Consensus 84 iDilVnnAG~ 93 (274)
T PRK08415 84 IDFIVHSVAF 93 (274)
T ss_pred CCEEEECCcc
Confidence 9999999985
No 216
>PRK08264 short chain dehydrogenase; Validated
Probab=95.89 E-value=0.05 Score=47.97 Aligned_cols=74 Identities=27% Similarity=0.441 Sum_probs=50.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCchHHHHHhcCCC-ee--eeCCChHHHHHH-hcCCCccEEEEcCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGDAKDLVTSLNPN-LV--IDYNEPEAMHSI-AGAGPYDVILDAAG 262 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~~~~~~~~lg~~-~v--~~~~~~~~~~~i-~~~~g~d~v~d~~g 262 (383)
.+.+++|+||+|++|..+++.+...|+ +|+++.++.+... +.+.. .+ .|..+..-..++ ...+.+|++|.++|
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag 82 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVT--DLGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAG 82 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhh--hcCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 567899999999999999999999999 9998886643211 12221 12 344443322333 23356899999998
Q ss_pred C
Q psy9949 263 I 263 (383)
Q Consensus 263 ~ 263 (383)
.
T Consensus 83 ~ 83 (238)
T PRK08264 83 I 83 (238)
T ss_pred c
Confidence 7
No 217
>PRK06194 hypothetical protein; Provisional
Probab=95.85 E-value=0.045 Score=49.86 Aligned_cols=77 Identities=18% Similarity=0.294 Sum_probs=50.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHh---cCCCe-e--eeCCChHHHHHHh-----cCCCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTS---LNPNL-V--IDYNEPEAMHSIA-----GAGPY 254 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~---lg~~~-v--~~~~~~~~~~~i~-----~~~g~ 254 (383)
+++++||+||+|++|..++..+...|++|++++++. .. +...+ .+... + .|..+....+.+. ..+++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 467899999999999999998888999999988653 22 22222 23221 1 2444432222221 13578
Q ss_pred cEEEEcCCCC
Q psy9949 255 DVILDAAGIP 264 (383)
Q Consensus 255 d~v~d~~g~~ 264 (383)
|++|.++|..
T Consensus 85 d~vi~~Ag~~ 94 (287)
T PRK06194 85 HLLFNNAGVG 94 (287)
T ss_pred CEEEECCCCC
Confidence 9999999863
No 218
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=95.85 E-value=0.041 Score=49.18 Aligned_cols=76 Identities=21% Similarity=0.316 Sum_probs=50.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH---HHHHhcCCC-ee--eeCCChHHH----HHHhc-CCCccE
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK---DLVTSLNPN-LV--IDYNEPEAM----HSIAG-AGPYDV 256 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~---~~~~~lg~~-~v--~~~~~~~~~----~~i~~-~~g~d~ 256 (383)
.+++++|+|++|++|.++++.+...|++|+.+.+.+.. +.+++.+.. .. .|..+.+-. +.+.+ .+.+|+
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~ 88 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDI 88 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 57899999999999999999999999999887754322 223334422 11 233332222 22222 357999
Q ss_pred EEEcCCC
Q psy9949 257 ILDAAGI 263 (383)
Q Consensus 257 v~d~~g~ 263 (383)
+|.++|.
T Consensus 89 li~~Ag~ 95 (253)
T PRK08993 89 LVNNAGL 95 (253)
T ss_pred EEECCCC
Confidence 9999985
No 219
>PRK06398 aldose dehydrogenase; Validated
Probab=95.84 E-value=0.037 Score=49.71 Aligned_cols=72 Identities=25% Similarity=0.366 Sum_probs=49.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCe-eeeCCChHHHH----HHh-cCCCccEEEEcC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNL-VIDYNEPEAMH----SIA-GAGPYDVILDAA 261 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~-v~~~~~~~~~~----~i~-~~~g~d~v~d~~ 261 (383)
.+++++|+||++++|..++..+...|++|+.+.+++.... .... ..|..+..-.+ .+. ..+++|++|.++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~----~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~A 80 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN----DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNA 80 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccC----ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 5689999999999999999999999999999886543211 1111 13444433222 222 235799999998
Q ss_pred CC
Q psy9949 262 GI 263 (383)
Q Consensus 262 g~ 263 (383)
|.
T Consensus 81 g~ 82 (258)
T PRK06398 81 GI 82 (258)
T ss_pred CC
Confidence 85
No 220
>PRK09291 short chain dehydrogenase; Provisional
Probab=95.83 E-value=0.059 Score=48.12 Aligned_cols=74 Identities=23% Similarity=0.259 Sum_probs=49.1
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHH----HhcCCC-ee--eeCCChHHHHHHhcCCCccEEEEc
Q psy9949 189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLV----TSLNPN-LV--IDYNEPEAMHSIAGAGPYDVILDA 260 (383)
Q Consensus 189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~----~~lg~~-~v--~~~~~~~~~~~i~~~~g~d~v~d~ 260 (383)
++++||+||+|++|..+++.+...|++|++++++.. .+.+ ...+.. .+ .|..+..-..... ..++|++|.+
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-~~~id~vi~~ 80 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAA-EWDVDVLLNN 80 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHh-cCCCCEEEEC
Confidence 358999999999999999999999999999987542 2221 223322 12 3444432222221 2479999999
Q ss_pred CCC
Q psy9949 261 AGI 263 (383)
Q Consensus 261 ~g~ 263 (383)
+|.
T Consensus 81 ag~ 83 (257)
T PRK09291 81 AGI 83 (257)
T ss_pred CCc
Confidence 884
No 221
>PRK09072 short chain dehydrogenase; Provisional
Probab=95.82 E-value=0.052 Score=48.80 Aligned_cols=77 Identities=26% Similarity=0.382 Sum_probs=50.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHHhc--CCC-ee--eeCCChHHH----HHHhcCCCccE
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVTSL--NPN-LV--IDYNEPEAM----HSIAGAGPYDV 256 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~~l--g~~-~v--~~~~~~~~~----~~i~~~~g~d~ 256 (383)
++.+++|+||+|++|..++..+...|++|+++++++. .+ ...++ +.. .. .|..+..-. +.+.+.+.+|+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 5678999999999999999988889999999996643 22 22222 211 12 233333222 22223467999
Q ss_pred EEEcCCCC
Q psy9949 257 ILDAAGIP 264 (383)
Q Consensus 257 v~d~~g~~ 264 (383)
+|.++|..
T Consensus 84 lv~~ag~~ 91 (263)
T PRK09072 84 LINNAGVN 91 (263)
T ss_pred EEECCCCC
Confidence 99998863
No 222
>PRK07890 short chain dehydrogenase; Provisional
Probab=95.79 E-value=0.042 Score=49.12 Aligned_cols=77 Identities=17% Similarity=0.200 Sum_probs=50.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHh---cCCC---eeeeCCChHHHHH----H-hcCCC
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTS---LNPN---LVIDYNEPEAMHS----I-AGAGP 253 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~---lg~~---~v~~~~~~~~~~~----i-~~~~g 253 (383)
-++++++|+||+|++|..++..+...|++|+.+++++. . +...+ .+.. ...|..+....+. + ...+.
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR 82 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 35789999999999999999999999999999986542 2 22222 2322 1134444332222 1 12357
Q ss_pred ccEEEEcCCC
Q psy9949 254 YDVILDAAGI 263 (383)
Q Consensus 254 ~d~v~d~~g~ 263 (383)
+|++|.++|.
T Consensus 83 ~d~vi~~ag~ 92 (258)
T PRK07890 83 VDALVNNAFR 92 (258)
T ss_pred ccEEEECCcc
Confidence 9999999975
No 223
>PRK06949 short chain dehydrogenase; Provisional
Probab=95.79 E-value=0.047 Score=48.76 Aligned_cols=77 Identities=26% Similarity=0.337 Sum_probs=50.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHH---hcCC-Cee--eeCCCh-HHHHHHh----cCCC
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVT---SLNP-NLV--IDYNEP-EAMHSIA----GAGP 253 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~---~lg~-~~v--~~~~~~-~~~~~i~----~~~g 253 (383)
.++++++|+||+|++|..++..+...|++|++++++. +.+ ... ..+. ..+ .|..+. ++.+.+. ..++
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 3678999999999999999999998999999998654 322 222 1221 122 233332 2222222 1357
Q ss_pred ccEEEEcCCC
Q psy9949 254 YDVILDAAGI 263 (383)
Q Consensus 254 ~d~v~d~~g~ 263 (383)
+|++|.++|.
T Consensus 87 ~d~li~~ag~ 96 (258)
T PRK06949 87 IDILVNNSGV 96 (258)
T ss_pred CCEEEECCCC
Confidence 9999999985
No 224
>PRK07062 short chain dehydrogenase; Provisional
Probab=95.78 E-value=0.052 Score=48.80 Aligned_cols=76 Identities=18% Similarity=0.271 Sum_probs=50.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHH----hcCCCee----eeCCChHHH----HHHhc-CC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVT----SLNPNLV----IDYNEPEAM----HSIAG-AG 252 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~----~lg~~~v----~~~~~~~~~----~~i~~-~~ 252 (383)
.+++++|+||++++|..+++.+...|++|++++++. +.+ ... ..+...+ .|..+.+-. +.+.+ .+
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 578999999999999999999999999999998654 222 111 1221122 344443322 22222 35
Q ss_pred CccEEEEcCCC
Q psy9949 253 PYDVILDAAGI 263 (383)
Q Consensus 253 g~d~v~d~~g~ 263 (383)
++|++|+++|.
T Consensus 87 ~id~li~~Ag~ 97 (265)
T PRK07062 87 GVDMLVNNAGQ 97 (265)
T ss_pred CCCEEEECCCC
Confidence 79999999985
No 225
>PRK05876 short chain dehydrogenase; Provisional
Probab=95.78 E-value=0.063 Score=48.72 Aligned_cols=76 Identities=18% Similarity=0.195 Sum_probs=50.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHH---hcCCC-ee--eeCCChHHHH----HHh-cCCCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVT---SLNPN-LV--IDYNEPEAMH----SIA-GAGPY 254 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~---~lg~~-~v--~~~~~~~~~~----~i~-~~~g~ 254 (383)
++++++|+||+|++|..++..+...|++|++++++. +.+ ... +.+.. .. .|..+.+-.. .+. ..+.+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV 84 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 578999999999999999999988999999888653 222 222 23332 11 2444432222 222 23579
Q ss_pred cEEEEcCCC
Q psy9949 255 DVILDAAGI 263 (383)
Q Consensus 255 d~v~d~~g~ 263 (383)
|++|+++|.
T Consensus 85 d~li~nAg~ 93 (275)
T PRK05876 85 DVVFSNAGI 93 (275)
T ss_pred CEEEECCCc
Confidence 999999985
No 226
>PRK07806 short chain dehydrogenase; Provisional
Probab=95.77 E-value=0.087 Score=46.77 Aligned_cols=76 Identities=20% Similarity=0.276 Sum_probs=49.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc--hHH-H---HHhcCCC-ee--eeCCChHHHHH----Hhc-CCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD--AKD-L---VTSLNPN-LV--IDYNEPEAMHS----IAG-AGP 253 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~--~~~-~---~~~lg~~-~v--~~~~~~~~~~~----i~~-~~g 253 (383)
.+++++|+||+|++|..++..+...|++|+++.++. +.+ . ++..+.. .. .|..+.+-... +.+ .++
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 568999999999999999998888999999888653 222 2 2222322 11 34444332222 221 257
Q ss_pred ccEEEEcCCC
Q psy9949 254 YDVILDAAGI 263 (383)
Q Consensus 254 ~d~v~d~~g~ 263 (383)
+|++|.++|.
T Consensus 85 ~d~vi~~ag~ 94 (248)
T PRK07806 85 LDALVLNASG 94 (248)
T ss_pred CcEEEECCCC
Confidence 9999998875
No 227
>PLN02253 xanthoxin dehydrogenase
Probab=95.76 E-value=0.067 Score=48.55 Aligned_cols=76 Identities=24% Similarity=0.363 Sum_probs=50.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcCC--C-ee--eeCCChHHHHH----Hhc-CCCcc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLNP--N-LV--IDYNEPEAMHS----IAG-AGPYD 255 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg~--~-~v--~~~~~~~~~~~----i~~-~~g~d 255 (383)
.+++++|+||+|++|..+++.+...|++|+++++.++ . +...+++. . .. .|..+.+..+. +.+ .+++|
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id 96 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD 96 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 4689999999999999999888888999999986532 2 23333321 1 11 34444332222 222 35799
Q ss_pred EEEEcCCC
Q psy9949 256 VILDAAGI 263 (383)
Q Consensus 256 ~v~d~~g~ 263 (383)
++|.++|.
T Consensus 97 ~li~~Ag~ 104 (280)
T PLN02253 97 IMVNNAGL 104 (280)
T ss_pred EEEECCCc
Confidence 99999885
No 228
>PRK06720 hypothetical protein; Provisional
Probab=95.74 E-value=0.12 Score=43.19 Aligned_cols=77 Identities=19% Similarity=0.252 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHH---hcCCCe-e--eeCCChH----HHHHH-hcCCCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVT---SLNPNL-V--IDYNEPE----AMHSI-AGAGPY 254 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~---~lg~~~-v--~~~~~~~----~~~~i-~~~~g~ 254 (383)
++++++|.||++++|..++..+...|++|+.+.+++. . +... +.+... . .|..+.. +.+++ .+.+++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i 94 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI 94 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999888888999999885532 2 1222 234331 2 2333322 22222 234679
Q ss_pred cEEEEcCCCC
Q psy9949 255 DVILDAAGIP 264 (383)
Q Consensus 255 d~v~d~~g~~ 264 (383)
|++|.++|..
T Consensus 95 DilVnnAG~~ 104 (169)
T PRK06720 95 DMLFQNAGLY 104 (169)
T ss_pred CEEEECCCcC
Confidence 9999998853
No 229
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=95.74 E-value=0.058 Score=48.19 Aligned_cols=77 Identities=23% Similarity=0.375 Sum_probs=51.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HH---HHhcCCC-ee--eeCCChHHHHHH----h-cCCCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DL---VTSLNPN-LV--IDYNEPEAMHSI----A-GAGPY 254 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~---~~~lg~~-~v--~~~~~~~~~~~i----~-~~~g~ 254 (383)
++++++|+||+|++|..+++.+...|++|+.+.+++. . +. .++.|.. .. .|..+......+ . ..+++
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI 88 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 5789999999999999999988888999998886643 2 22 2222322 11 244443322222 1 23579
Q ss_pred cEEEEcCCCC
Q psy9949 255 DVILDAAGIP 264 (383)
Q Consensus 255 d~v~d~~g~~ 264 (383)
|++|.++|..
T Consensus 89 d~li~~ag~~ 98 (255)
T PRK07523 89 DILVNNAGMQ 98 (255)
T ss_pred CEEEECCCCC
Confidence 9999999863
No 230
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.72 E-value=0.054 Score=48.58 Aligned_cols=77 Identities=21% Similarity=0.314 Sum_probs=50.7
Q ss_pred CCCEEEEEcC--CchHHHHHHHHHHHCCCEEEEEecCc--h-H-HHHHhcCCC-ee--eeCCChHHH----HHHhc-CCC
Q psy9949 188 RDKRVLVLGA--SGGVGTMAVQLLKAWDIEVVTTCSGD--A-K-DLVTSLNPN-LV--IDYNEPEAM----HSIAG-AGP 253 (383)
Q Consensus 188 ~~~~VlI~ga--~g~vG~~ai~la~~~G~~Vi~~~~~~--~-~-~~~~~lg~~-~v--~~~~~~~~~----~~i~~-~~g 253 (383)
.+++++|+|+ ++++|.++++.+...|++|+.+++++ + . +...+++.. .. .|..+.+-. +.+.+ .++
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~ 85 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG 85 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 5689999998 79999999998888999999988543 1 2 233334321 11 344443322 22222 367
Q ss_pred ccEEEEcCCCC
Q psy9949 254 YDVILDAAGIP 264 (383)
Q Consensus 254 ~d~v~d~~g~~ 264 (383)
+|++|+++|..
T Consensus 86 iD~li~nAG~~ 96 (256)
T PRK07889 86 LDGVVHSIGFA 96 (256)
T ss_pred CcEEEEccccc
Confidence 99999998853
No 231
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=95.71 E-value=0.078 Score=47.49 Aligned_cols=76 Identities=20% Similarity=0.222 Sum_probs=51.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH-HHHH---hcCCCe---eeeCCChHHH----HHHh-cCCCcc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVT---SLNPNL---VIDYNEPEAM----HSIA-GAGPYD 255 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~-~~~~---~lg~~~---v~~~~~~~~~----~~i~-~~~g~d 255 (383)
.+++++|+||+|++|..+++.+...|++|+++++++.. +... ..+.+. ..|..+.... +.+. ..+++|
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 86 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRID 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCe
Confidence 46899999999999999999998899999998876432 2222 233321 1354443222 2222 235799
Q ss_pred EEEEcCCC
Q psy9949 256 VILDAAGI 263 (383)
Q Consensus 256 ~v~d~~g~ 263 (383)
++|.++|.
T Consensus 87 ~lv~nAg~ 94 (260)
T PRK12823 87 VLINNVGG 94 (260)
T ss_pred EEEECCcc
Confidence 99999974
No 232
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=95.67 E-value=0.067 Score=51.33 Aligned_cols=75 Identities=21% Similarity=0.232 Sum_probs=48.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHhcCCC-ee--eeCCChHHHHHHhcCCCccEEEEcCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTSLNPN-LV--IDYNEPEAMHSIAGAGPYDVILDAAG 262 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~lg~~-~v--~~~~~~~~~~~i~~~~g~d~v~d~~g 262 (383)
++++++|+||+|++|.+++..+...|++|+++++++ +.+ ...+.+.. .. .|..+.+.... ..+++|++|.++|
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~--~l~~IDiLInnAG 254 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAE--LLEKVDILIINHG 254 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHH--HhCCCCEEEECCC
Confidence 467999999999999999998888899999988653 222 12211111 12 34444322111 1357999999887
Q ss_pred CC
Q psy9949 263 IP 264 (383)
Q Consensus 263 ~~ 264 (383)
..
T Consensus 255 i~ 256 (406)
T PRK07424 255 IN 256 (406)
T ss_pred cC
Confidence 53
No 233
>PRK06484 short chain dehydrogenase; Validated
Probab=95.66 E-value=0.064 Score=53.48 Aligned_cols=77 Identities=27% Similarity=0.440 Sum_probs=53.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCCCe---eeeCCChHHHHH----Hhc-CCCccE
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNPNL---VIDYNEPEAMHS----IAG-AGPYDV 256 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~~~---v~~~~~~~~~~~----i~~-~~g~d~ 256 (383)
..+++++|+|+++++|.++++.+...|++|+.++++. +. +..++++... ..|..+..-.+. +.+ .+++|+
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV 82 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 4678999999999999999999999999999998653 33 3445555432 235444332222 222 367999
Q ss_pred EEEcCCC
Q psy9949 257 ILDAAGI 263 (383)
Q Consensus 257 v~d~~g~ 263 (383)
+|+++|.
T Consensus 83 li~nag~ 89 (520)
T PRK06484 83 LVNNAGV 89 (520)
T ss_pred EEECCCc
Confidence 9999885
No 234
>PRK08628 short chain dehydrogenase; Provisional
Probab=95.65 E-value=0.054 Score=48.44 Aligned_cols=76 Identities=21% Similarity=0.344 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHHH---hcCCC-ee--eeCCChHHHHH----Hhc-CCCcc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLVT---SLNPN-LV--IDYNEPEAMHS----IAG-AGPYD 255 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~~---~lg~~-~v--~~~~~~~~~~~----i~~-~~g~d 255 (383)
++++++|+||+|++|..+++.+...|++|+++++++. .+..+ +.+.. .. .|..+..-.+. +.+ .+++|
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 85 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRID 85 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 5679999999999999999888889999988886543 23222 23322 12 34444332222 211 25799
Q ss_pred EEEEcCCC
Q psy9949 256 VILDAAGI 263 (383)
Q Consensus 256 ~v~d~~g~ 263 (383)
++|.++|.
T Consensus 86 ~vi~~ag~ 93 (258)
T PRK08628 86 GLVNNAGV 93 (258)
T ss_pred EEEECCcc
Confidence 99999984
No 235
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.65 E-value=0.1 Score=46.18 Aligned_cols=77 Identities=25% Similarity=0.369 Sum_probs=50.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHH---hcCCC-ee--eeCCChHHHH----HHh-cCCC
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVT---SLNPN-LV--IDYNEPEAMH----SIA-GAGP 253 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~---~lg~~-~v--~~~~~~~~~~----~i~-~~~g 253 (383)
...++++|+|++|++|..++..+...|++|++++++.+ . +... +.+.. .+ .|..+.+... .+. ..++
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC 83 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 56678999999999999999999889999999997643 2 2222 22322 12 2444332222 221 1357
Q ss_pred ccEEEEcCCC
Q psy9949 254 YDVILDAAGI 263 (383)
Q Consensus 254 ~d~v~d~~g~ 263 (383)
+|++|.++|.
T Consensus 84 id~lv~~ag~ 93 (241)
T PRK07454 84 PDVLINNAGM 93 (241)
T ss_pred CCEEEECCCc
Confidence 9999999985
No 236
>PRK07832 short chain dehydrogenase; Provisional
Probab=95.64 E-value=0.086 Score=47.67 Aligned_cols=74 Identities=28% Similarity=0.429 Sum_probs=49.2
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HH---HhcCCCe----eeeCCChHHHH----HHh-cCCCccE
Q psy9949 191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LV---TSLNPNL----VIDYNEPEAMH----SIA-GAGPYDV 256 (383)
Q Consensus 191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~---~~lg~~~----v~~~~~~~~~~----~i~-~~~g~d~ 256 (383)
+++|+||+|++|..+++.+...|++|+++.++++ .+ .. +..+... ..|..+....+ .+. ..+++|+
T Consensus 2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV 81 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 6999999999999999998889999988886542 22 22 2233321 24555543322 222 2357999
Q ss_pred EEEcCCCC
Q psy9949 257 ILDAAGIP 264 (383)
Q Consensus 257 v~d~~g~~ 264 (383)
+|.++|..
T Consensus 82 lv~~ag~~ 89 (272)
T PRK07832 82 VMNIAGIS 89 (272)
T ss_pred EEECCCCC
Confidence 99999853
No 237
>PRK07677 short chain dehydrogenase; Provisional
Probab=95.64 E-value=0.089 Score=46.92 Aligned_cols=75 Identities=23% Similarity=0.368 Sum_probs=49.3
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-H---HHhcCCC-eee--eCCChHHHHH----Hh-cCCCcc
Q psy9949 189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-L---VTSLNPN-LVI--DYNEPEAMHS----IA-GAGPYD 255 (383)
Q Consensus 189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~---~~~lg~~-~v~--~~~~~~~~~~----i~-~~~g~d 255 (383)
+++++|+|++|++|..+++.+...|++|++++++.. .+ . +++.+.. ..+ |..+.+-.++ +. ..+++|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 468999999999999999999999999999986542 22 2 2222322 222 4444332222 21 235799
Q ss_pred EEEEcCCC
Q psy9949 256 VILDAAGI 263 (383)
Q Consensus 256 ~v~d~~g~ 263 (383)
++|+++|.
T Consensus 81 ~lI~~ag~ 88 (252)
T PRK07677 81 ALINNAAG 88 (252)
T ss_pred EEEECCCC
Confidence 99999874
No 238
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.63 E-value=0.097 Score=46.17 Aligned_cols=77 Identities=29% Similarity=0.388 Sum_probs=50.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH----HHHhcCCCee---eeCCChHHHHH-Hhc----CCCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD----LVTSLNPNLV---IDYNEPEAMHS-IAG----AGPY 254 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~----~~~~lg~~~v---~~~~~~~~~~~-i~~----~~g~ 254 (383)
++++++|+|++|++|..+++.+...|.+|+++.++. +.+ ..++.+.... .|..+.....+ +.+ .+++
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 467899999999999999999888899998888664 222 2223343222 34444332222 221 2578
Q ss_pred cEEEEcCCCC
Q psy9949 255 DVILDAAGIP 264 (383)
Q Consensus 255 d~v~d~~g~~ 264 (383)
|.++.++|..
T Consensus 84 d~vi~~ag~~ 93 (246)
T PRK05653 84 DILVNNAGIT 93 (246)
T ss_pred CEEEECCCcC
Confidence 9999998763
No 239
>PRK07577 short chain dehydrogenase; Provisional
Probab=95.60 E-value=0.022 Score=50.16 Aligned_cols=72 Identities=25% Similarity=0.373 Sum_probs=48.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCC-eeeeCCChHHH----HHHhcCCCccEEEEcCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPN-LVIDYNEPEAM----HSIAGAGPYDVILDAAG 262 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~-~v~~~~~~~~~----~~i~~~~g~d~v~d~~g 262 (383)
.+++++|+||+|++|..+++.+...|++|+++.++.... .... ...|..+.... +.+.+..++|++|.++|
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag 77 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD----FPGELFACDLADIEQTAATLAQINEIHPVDAIVNNVG 77 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc----cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCC
Confidence 357899999999999999999988999999998764332 1111 12344443322 22222346899999988
Q ss_pred C
Q psy9949 263 I 263 (383)
Q Consensus 263 ~ 263 (383)
.
T Consensus 78 ~ 78 (234)
T PRK07577 78 I 78 (234)
T ss_pred C
Confidence 5
No 240
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.60 E-value=0.095 Score=46.81 Aligned_cols=76 Identities=17% Similarity=0.219 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc--h-HHHH---HhcCCC-ee--eeCCChHHHH----HHh-cCCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD--A-KDLV---TSLNPN-LV--IDYNEPEAMH----SIA-GAGP 253 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~--~-~~~~---~~lg~~-~v--~~~~~~~~~~----~i~-~~~g 253 (383)
++++++|+|+++++|..+++.+...|++|++++++. . .+.. ++.+.. .. .|..+.+-.. ++. ..+.
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 578999999999999999999999999999988543 2 1222 233322 11 2433332222 222 2367
Q ss_pred ccEEEEcCCC
Q psy9949 254 YDVILDAAGI 263 (383)
Q Consensus 254 ~d~v~d~~g~ 263 (383)
+|++|.++|.
T Consensus 87 id~li~~ag~ 96 (254)
T PRK06114 87 LTLAVNAAGI 96 (254)
T ss_pred CCEEEECCCC
Confidence 9999999985
No 241
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=95.56 E-value=0.097 Score=50.17 Aligned_cols=78 Identities=27% Similarity=0.443 Sum_probs=52.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH--------HHHHhc-CCCee-eeCCChHHHHHHhc-CC-Cc
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK--------DLVTSL-NPNLV-IDYNEPEAMHSIAG-AG-PY 254 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~--------~~~~~l-g~~~v-~~~~~~~~~~~i~~-~~-g~ 254 (383)
..+.+|+|+||+|.+|..++..+...|.+|++++++... +..... +...+ .|..+.+....+.+ .+ ++
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~ 137 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPV 137 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence 567899999999999999999998899999999965421 111112 23222 35555443333332 22 79
Q ss_pred cEEEEcCCCC
Q psy9949 255 DVILDAAGIP 264 (383)
Q Consensus 255 d~v~d~~g~~ 264 (383)
|+||+|++..
T Consensus 138 D~Vi~~aa~~ 147 (390)
T PLN02657 138 DVVVSCLASR 147 (390)
T ss_pred cEEEECCccC
Confidence 9999998753
No 242
>PRK05884 short chain dehydrogenase; Provisional
Probab=95.55 E-value=0.078 Score=46.47 Aligned_cols=72 Identities=17% Similarity=0.272 Sum_probs=48.4
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHhcCCCee-eeCCChHHHHHHhc-C-CCccEEEEcCC
Q psy9949 191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTSLNPNLV-IDYNEPEAMHSIAG-A-GPYDVILDAAG 262 (383)
Q Consensus 191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~lg~~~v-~~~~~~~~~~~i~~-~-~g~d~v~d~~g 262 (383)
+++|+||+|++|..+++.+...|++|+.+.+++ +.+ ..++++...+ .|..+....+.+.+ . ..+|++++++|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCC
Confidence 589999999999999999888899999988654 332 3344444322 35444433333222 2 36899999876
No 243
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=95.54 E-value=0.082 Score=47.38 Aligned_cols=73 Identities=19% Similarity=0.216 Sum_probs=48.2
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHH---hcCCCee--eeCCChHHHHH----Hh-cCCCccEEE
Q psy9949 191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVT---SLNPNLV--IDYNEPEAMHS----IA-GAGPYDVIL 258 (383)
Q Consensus 191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~---~lg~~~v--~~~~~~~~~~~----i~-~~~g~d~v~ 258 (383)
+++|+||++++|..+++.+...|++|+.+.+++. . +... +.+.... .|..+.+..++ +. ..+++|++|
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li 81 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV 81 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 6899999999999999988889999999986643 2 2222 2232222 34444332222 22 236799999
Q ss_pred EcCCC
Q psy9949 259 DAAGI 263 (383)
Q Consensus 259 d~~g~ 263 (383)
.++|.
T Consensus 82 ~naG~ 86 (259)
T PRK08340 82 WNAGN 86 (259)
T ss_pred ECCCC
Confidence 99985
No 244
>PRK07774 short chain dehydrogenase; Provisional
Probab=95.54 E-value=0.075 Score=47.19 Aligned_cols=76 Identities=22% Similarity=0.371 Sum_probs=49.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHH---hcCCC-ee--eeCCChHHHH----HHh-cCCCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVT---SLNPN-LV--IDYNEPEAMH----SIA-GAGPY 254 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~---~lg~~-~v--~~~~~~~~~~----~i~-~~~g~ 254 (383)
++++++|+|++|++|..+++.+...|++|+.+.+++. . +... +.+.. .. .|..+..-.. .+. ..+++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 5678999999999999999988888999999997642 2 2222 22221 11 3444432222 222 22579
Q ss_pred cEEEEcCCC
Q psy9949 255 DVILDAAGI 263 (383)
Q Consensus 255 d~v~d~~g~ 263 (383)
|++|.++|.
T Consensus 85 d~vi~~ag~ 93 (250)
T PRK07774 85 DYLVNNAAI 93 (250)
T ss_pred CEEEECCCC
Confidence 999999985
No 245
>PRK12743 oxidoreductase; Provisional
Probab=95.53 E-value=0.11 Score=46.53 Aligned_cols=75 Identities=19% Similarity=0.295 Sum_probs=49.3
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-Cch-HH----HHHhcCCC-ee--eeCCChHHH----HHHh-cCCCc
Q psy9949 189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS-GDA-KD----LVTSLNPN-LV--IDYNEPEAM----HSIA-GAGPY 254 (383)
Q Consensus 189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~-~~~-~~----~~~~lg~~-~v--~~~~~~~~~----~~i~-~~~g~ 254 (383)
+++++|+||+|++|..+++.+...|++|+.+.+ +.+ .+ .++..+.. .. .|..+..-. +.+. ..+++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999999988864 322 21 22234432 22 344443322 2222 23579
Q ss_pred cEEEEcCCC
Q psy9949 255 DVILDAAGI 263 (383)
Q Consensus 255 d~v~d~~g~ 263 (383)
|++|.++|.
T Consensus 82 d~li~~ag~ 90 (256)
T PRK12743 82 DVLVNNAGA 90 (256)
T ss_pred CEEEECCCC
Confidence 999999885
No 246
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.52 E-value=0.048 Score=48.43 Aligned_cols=76 Identities=21% Similarity=0.342 Sum_probs=50.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHHhcC--CC-ee--eeCCChHHHHHH-----hcCCCcc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVTSLN--PN-LV--IDYNEPEAMHSI-----AGAGPYD 255 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~~lg--~~-~v--~~~~~~~~~~~i-----~~~~g~d 255 (383)
++.+++|+||+|++|..+++.+...|++|++++++.. .+ ....+. .. .. .|..+.+-...+ ...+++|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4679999999999999999998888999999997643 22 223222 11 11 233333322222 1235799
Q ss_pred EEEEcCCC
Q psy9949 256 VILDAAGI 263 (383)
Q Consensus 256 ~v~d~~g~ 263 (383)
++|.++|.
T Consensus 84 ~vi~~ag~ 91 (251)
T PRK07231 84 ILVNNAGT 91 (251)
T ss_pred EEEECCCC
Confidence 99999985
No 247
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=95.51 E-value=0.096 Score=46.81 Aligned_cols=76 Identities=20% Similarity=0.318 Sum_probs=50.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcCCC-ee--eeCCChHHHHH----Hh-cCCCccEE
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLNPN-LV--IDYNEPEAMHS----IA-GAGPYDVI 257 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg~~-~v--~~~~~~~~~~~----i~-~~~g~d~v 257 (383)
.+++++|+|++|++|..+++.+...|++|+.++++.+ . +...+++.. .. .|..+.+-.+. +. ..+++|++
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5678999999999999999999989999999986643 2 233334322 11 23333322222 21 23579999
Q ss_pred EEcCCC
Q psy9949 258 LDAAGI 263 (383)
Q Consensus 258 ~d~~g~ 263 (383)
+.++|.
T Consensus 85 i~~ag~ 90 (257)
T PRK07067 85 FNNAAL 90 (257)
T ss_pred EECCCc
Confidence 999875
No 248
>KOG0725|consensus
Probab=95.49 E-value=0.1 Score=47.19 Aligned_cols=79 Identities=24% Similarity=0.334 Sum_probs=53.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH--HHHH---hcCCC------eeeeCCChHHHHH-----Hhc
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK--DLVT---SLNPN------LVIDYNEPEAMHS-----IAG 250 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~--~~~~---~lg~~------~v~~~~~~~~~~~-----i~~ 250 (383)
-.+++++|+|++.++|.+++..+...|++|+.+.++++. +.+. ..+.. .+.|..+.+..+. +.+
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~ 85 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK 85 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence 378899999999999999999999999999999976542 2222 22221 1234443332222 223
Q ss_pred -CCCccEEEEcCCCCc
Q psy9949 251 -AGPYDVILDAAGIPL 265 (383)
Q Consensus 251 -~~g~d~v~d~~g~~~ 265 (383)
.+..|+.++++|...
T Consensus 86 ~~GkidiLvnnag~~~ 101 (270)
T KOG0725|consen 86 FFGKIDILVNNAGALG 101 (270)
T ss_pred hCCCCCEEEEcCCcCC
Confidence 367999999988643
No 249
>PRK07326 short chain dehydrogenase; Provisional
Probab=95.49 E-value=0.072 Score=46.89 Aligned_cols=76 Identities=25% Similarity=0.358 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcCC---Cee--eeCCChH-HHHHHhc----CCCcc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLNP---NLV--IDYNEPE-AMHSIAG----AGPYD 255 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg~---~~v--~~~~~~~-~~~~i~~----~~g~d 255 (383)
.+.+++|+||+|++|..+++.+...|++|++++++.. . +..+++.. ... .|..+.. +.+.+.+ .+++|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 5689999999999999999888888999999986542 2 23333321 112 2434332 2222221 25799
Q ss_pred EEEEcCCC
Q psy9949 256 VILDAAGI 263 (383)
Q Consensus 256 ~v~d~~g~ 263 (383)
++|.+.|.
T Consensus 85 ~vi~~ag~ 92 (237)
T PRK07326 85 VLIANAGV 92 (237)
T ss_pred EEEECCCC
Confidence 99999875
No 250
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.49 E-value=0.14 Score=46.65 Aligned_cols=75 Identities=21% Similarity=0.217 Sum_probs=52.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD 266 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~ 266 (383)
-+|++|+|.|+++-+|..++.++...|++|+..-+. .. ++.+.+ .++|++|.++|.+..
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~-t~-----------------~L~~~~---~~aDIvI~AtG~~~~ 215 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR-TQ-----------------NLPELV---KQADIIVGAVGKPEL 215 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC-ch-----------------hHHHHh---ccCCEEEEccCCCCc
Confidence 478899999944449999999999999976655542 11 111111 368999999987663
Q ss_pred cccccccccccCCCceEEEec
Q psy9949 267 QINSYLPFLKTGKFSKFVTLR 287 (383)
Q Consensus 267 ~~~~~~~~l~~~~~G~~v~~~ 287 (383)
.. .+.++ ++..+++++
T Consensus 216 -v~--~~~lk--~gavViDvg 231 (283)
T PRK14192 216 -IK--KDWIK--QGAVVVDAG 231 (283)
T ss_pred -CC--HHHcC--CCCEEEEEE
Confidence 33 45677 888888875
No 251
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=95.48 E-value=0.022 Score=49.35 Aligned_cols=97 Identities=23% Similarity=0.233 Sum_probs=62.3
Q ss_pred hhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecCchH-----HHHHhcCCCee-eeCCChHHHHHHhc
Q psy9949 179 TAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI--EVVTTCSGDAK-----DLVTSLNPNLV-IDYNEPEAMHSIAG 250 (383)
Q Consensus 179 ~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~--~Vi~~~~~~~~-----~~~~~lg~~~v-~~~~~~~~~~~i~~ 250 (383)
...+ ++|++||-.| +|.|+.++-+++..|. +|+.+...+.. +.++.++.+++ +...+ ......+
T Consensus 67 ~L~l----~pg~~VLeIG--tGsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gd--g~~g~~~ 138 (209)
T PF01135_consen 67 ALDL----KPGDRVLEIG--TGSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGD--GSEGWPE 138 (209)
T ss_dssp HTTC-----TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES---GGGTTGG
T ss_pred HHhc----CCCCEEEEec--CCCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcc--hhhcccc
Confidence 5567 9999999998 5678888889988775 68888866542 34445666544 22222 1122223
Q ss_pred CCCccEEEEcCCCCcccccccccccccCCCceEEEe
Q psy9949 251 AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTL 286 (383)
Q Consensus 251 ~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~ 286 (383)
.++||.|+-+.+-+..... +++.|+ ++|++|..
T Consensus 139 ~apfD~I~v~~a~~~ip~~-l~~qL~--~gGrLV~p 171 (209)
T PF01135_consen 139 EAPFDRIIVTAAVPEIPEA-LLEQLK--PGGRLVAP 171 (209)
T ss_dssp G-SEEEEEESSBBSS--HH-HHHTEE--EEEEEEEE
T ss_pred CCCcCEEEEeeccchHHHH-HHHhcC--CCcEEEEE
Confidence 4689999988877665433 588999 99999875
No 252
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.47 E-value=0.079 Score=47.42 Aligned_cols=78 Identities=19% Similarity=0.317 Sum_probs=52.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecCc-hHH----HHHhcCCCe---eeeCCChHHHHHHh-----cCC
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTCSGD-AKD----LVTSLNPNL---VIDYNEPEAMHSIA-----GAG 252 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~~~-~~~----~~~~lg~~~---v~~~~~~~~~~~i~-----~~~ 252 (383)
-++++++|+|++|++|..+++.+...|++ |++++++. +.. .+++.+... ..|..+.+...++. ..+
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG 83 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 36789999999999999999999999997 88888653 222 223334321 13554433322222 125
Q ss_pred CccEEEEcCCCC
Q psy9949 253 PYDVILDAAGIP 264 (383)
Q Consensus 253 g~d~v~d~~g~~ 264 (383)
++|++|.++|..
T Consensus 84 ~id~li~~ag~~ 95 (260)
T PRK06198 84 RLDALVNAAGLT 95 (260)
T ss_pred CCCEEEECCCcC
Confidence 799999999853
No 253
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.46 E-value=0.093 Score=47.17 Aligned_cols=76 Identities=22% Similarity=0.393 Sum_probs=49.8
Q ss_pred CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEecCch-HH----HHHhcCCCee--eeCCChHHHH----HHhc-CCC
Q psy9949 188 RDKRVLVLGASG--GVGTMAVQLLKAWDIEVVTTCSGDA-KD----LVTSLNPNLV--IDYNEPEAMH----SIAG-AGP 253 (383)
Q Consensus 188 ~~~~VlI~ga~g--~vG~~ai~la~~~G~~Vi~~~~~~~-~~----~~~~lg~~~v--~~~~~~~~~~----~i~~-~~g 253 (383)
.+++++|+||++ ++|.++++.+...|++|+...++++ .+ +..+.+.... .|..+.+-.+ .+.+ .+.
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS 86 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 578999999886 8999998888888999988876532 12 2233343322 3444433222 2222 367
Q ss_pred ccEEEEcCCC
Q psy9949 254 YDVILDAAGI 263 (383)
Q Consensus 254 ~d~v~d~~g~ 263 (383)
+|++++++|.
T Consensus 87 iDilVnnag~ 96 (260)
T PRK06603 87 FDFLLHGMAF 96 (260)
T ss_pred ccEEEEcccc
Confidence 9999998874
No 254
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.44 E-value=0.11 Score=45.70 Aligned_cols=76 Identities=12% Similarity=0.151 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-H---HHhcCCCe-e--eeCCChHHH----HHHh-cCC-C
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-L---VTSLNPNL-V--IDYNEPEAM----HSIA-GAG-P 253 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~---~~~lg~~~-v--~~~~~~~~~----~~i~-~~~-g 253 (383)
++++++|+|+++++|.+++..+...|++|+.+.++++ .+ . .++.+.+. . .|..+.+-. +.+. ..+ .
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999999999999998888889999999886543 22 2 22334331 1 233333222 2222 235 7
Q ss_pred ccEEEEcCCC
Q psy9949 254 YDVILDAAGI 263 (383)
Q Consensus 254 ~d~v~d~~g~ 263 (383)
+|++|.++|.
T Consensus 84 iD~li~nag~ 93 (227)
T PRK08862 84 PDVLVNNWTS 93 (227)
T ss_pred CCEEEECCcc
Confidence 9999999974
No 255
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.43 E-value=0.12 Score=46.20 Aligned_cols=76 Identities=30% Similarity=0.449 Sum_probs=50.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHHh----cCCC-ee--eeCCChHHHHH-HhcCCCccEE
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVTS----LNPN-LV--IDYNEPEAMHS-IAGAGPYDVI 257 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~~----lg~~-~v--~~~~~~~~~~~-i~~~~g~d~v 257 (383)
++++++|+|+++++|..+++.+...|++|++++++.. .+ ...+ .+.. .. .|..+.+-... +...+.+|++
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l 85 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDIL 85 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence 5789999999999999999988889999999986542 22 2221 2321 12 24433322222 2334679999
Q ss_pred EEcCCC
Q psy9949 258 LDAAGI 263 (383)
Q Consensus 258 ~d~~g~ 263 (383)
|.++|.
T Consensus 86 v~~ag~ 91 (259)
T PRK06125 86 VNNAGA 91 (259)
T ss_pred EECCCC
Confidence 999885
No 256
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.43 E-value=0.12 Score=46.15 Aligned_cols=76 Identities=22% Similarity=0.314 Sum_probs=50.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH----HHHhcCCC-ee--eeCCChHHH----HHHhc-CCCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD----LVTSLNPN-LV--IDYNEPEAM----HSIAG-AGPY 254 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~----~~~~lg~~-~v--~~~~~~~~~----~~i~~-~~g~ 254 (383)
++++++|+|++|++|..+++.+...|++|+.++++.+ .+ ..++.+.. .. .|..+.+-. +.+.+ .+++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999999999999999888888999999996642 21 22333432 12 244333222 22222 3578
Q ss_pred cEEEEcCCC
Q psy9949 255 DVILDAAGI 263 (383)
Q Consensus 255 d~v~d~~g~ 263 (383)
|++|.++|.
T Consensus 86 d~li~~ag~ 94 (253)
T PRK06172 86 DYAFNNAGI 94 (253)
T ss_pred CEEEECCCC
Confidence 999999885
No 257
>PRK07024 short chain dehydrogenase; Provisional
Probab=95.41 E-value=0.094 Score=46.94 Aligned_cols=75 Identities=23% Similarity=0.328 Sum_probs=48.7
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHhcCC--C-ee--eeCCChHHHHH----Hh-cCCCccE
Q psy9949 189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTSLNP--N-LV--IDYNEPEAMHS----IA-GAGPYDV 256 (383)
Q Consensus 189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~lg~--~-~v--~~~~~~~~~~~----i~-~~~g~d~ 256 (383)
+.+++|+||+|++|..++..+...|++|++++++. +.+ ...++.. . .. .|..+.+-... +. ..+.+|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 35899999999999999988888899999998653 322 2333321 1 11 34444332222 22 2356899
Q ss_pred EEEcCCC
Q psy9949 257 ILDAAGI 263 (383)
Q Consensus 257 v~d~~g~ 263 (383)
+|.++|.
T Consensus 82 lv~~ag~ 88 (257)
T PRK07024 82 VIANAGI 88 (257)
T ss_pred EEECCCc
Confidence 9999885
No 258
>PRK08278 short chain dehydrogenase; Provisional
Probab=95.39 E-value=0.13 Score=46.57 Aligned_cols=76 Identities=14% Similarity=0.185 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch--------H-HH---HHhcCCCe-e--eeCCChHHHHH----H
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA--------K-DL---VTSLNPNL-V--IDYNEPEAMHS----I 248 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~--------~-~~---~~~lg~~~-v--~~~~~~~~~~~----i 248 (383)
.+++++|+||+|++|..+++.+...|++|++++++.. . +. .+..+... + .|..+..-... +
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~ 84 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA 84 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 5679999999999999999988888999999986431 1 11 12233321 1 34444332222 2
Q ss_pred h-cCCCccEEEEcCCC
Q psy9949 249 A-GAGPYDVILDAAGI 263 (383)
Q Consensus 249 ~-~~~g~d~v~d~~g~ 263 (383)
. ..+.+|++|.++|.
T Consensus 85 ~~~~g~id~li~~ag~ 100 (273)
T PRK08278 85 VERFGGIDICVNNASA 100 (273)
T ss_pred HHHhCCCCEEEECCCC
Confidence 1 23579999999885
No 259
>PRK08303 short chain dehydrogenase; Provisional
Probab=95.39 E-value=0.1 Score=48.17 Aligned_cols=35 Identities=34% Similarity=0.290 Sum_probs=31.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG 222 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~ 222 (383)
.+++++|+||++++|.++++.+...|++|++++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 57899999999999999999999899999998864
No 260
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.37 E-value=0.12 Score=45.95 Aligned_cols=76 Identities=22% Similarity=0.300 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHH---hcCCC-ee--eeCCChHHHH----HHhc-CCCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVT---SLNPN-LV--IDYNEPEAMH----SIAG-AGPY 254 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~---~lg~~-~v--~~~~~~~~~~----~i~~-~~g~ 254 (383)
++++++|+||+|++|..+++.+...|++|+.++++. +.+ ..+ +.+.. .. .|..+..-.+ ++.+ .+.+
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 86 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL 86 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 567999999999999999999998999999999653 222 222 22322 11 2443332222 2222 3579
Q ss_pred cEEEEcCCC
Q psy9949 255 DVILDAAGI 263 (383)
Q Consensus 255 d~v~d~~g~ 263 (383)
|+++.++|.
T Consensus 87 d~li~~ag~ 95 (252)
T PRK07035 87 DILVNNAAA 95 (252)
T ss_pred CEEEECCCc
Confidence 999999884
No 261
>PRK09186 flagellin modification protein A; Provisional
Probab=95.37 E-value=0.083 Score=47.11 Aligned_cols=76 Identities=24% Similarity=0.337 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhc----CCC---e-eeeCCChHHHHH-Hh---c-CC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSL----NPN---L-VIDYNEPEAMHS-IA---G-AG 252 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~l----g~~---~-v~~~~~~~~~~~-i~---~-~~ 252 (383)
++++++|+||+|++|..++..+...|++|+.++++. +. +.+.++ +.. . ..|..+.+-... +. + .+
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 578999999999999999999998999999998653 32 222222 222 1 235444332222 22 1 35
Q ss_pred CccEEEEcCCC
Q psy9949 253 PYDVILDAAGI 263 (383)
Q Consensus 253 g~d~v~d~~g~ 263 (383)
++|++|.+++.
T Consensus 83 ~id~vi~~A~~ 93 (256)
T PRK09186 83 KIDGAVNCAYP 93 (256)
T ss_pred CccEEEECCcc
Confidence 69999999863
No 262
>PRK06484 short chain dehydrogenase; Validated
Probab=95.36 E-value=0.093 Score=52.35 Aligned_cols=76 Identities=22% Similarity=0.322 Sum_probs=52.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHhcCCCe---eeeCCChHHHHH----Hh-cCCCccEE
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTSLNPNL---VIDYNEPEAMHS----IA-GAGPYDVI 257 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~lg~~~---v~~~~~~~~~~~----i~-~~~g~d~v 257 (383)
.+++++|+||++++|..+++.+...|++|+.++++. +.+ ..++++... ..|..+.+-.+. +. +.+.+|++
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 347 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVL 347 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 468999999999999999999888999999998654 333 334444332 134444332222 22 23679999
Q ss_pred EEcCCC
Q psy9949 258 LDAAGI 263 (383)
Q Consensus 258 ~d~~g~ 263 (383)
|.++|.
T Consensus 348 i~nAg~ 353 (520)
T PRK06484 348 VNNAGI 353 (520)
T ss_pred EECCCC
Confidence 999985
No 263
>PRK06953 short chain dehydrogenase; Provisional
Probab=95.32 E-value=0.12 Score=45.01 Aligned_cols=75 Identities=27% Similarity=0.407 Sum_probs=49.9
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCe-eeeCCChHHHHHHh---cCCCccEEEEcCCCC
Q psy9949 190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNL-VIDYNEPEAMHSIA---GAGPYDVILDAAGIP 264 (383)
Q Consensus 190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~-v~~~~~~~~~~~i~---~~~g~d~v~d~~g~~ 264 (383)
++++|+|++|++|..+++.+...|++|+.++++. ..+.+...+... ..|..+.+..+.+. ...++|++|.++|..
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~~ 81 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGVY 81 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCcc
Confidence 4799999999999999888878899999988653 333344444332 23444433333322 123699999988764
No 264
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=95.32 E-value=0.12 Score=46.07 Aligned_cols=76 Identities=21% Similarity=0.375 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHH---hcCCC-ee--eeCCChHHHH----HHh-cCCCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVT---SLNPN-LV--IDYNEPEAMH----SIA-GAGPY 254 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~---~lg~~-~v--~~~~~~~~~~----~i~-~~~g~ 254 (383)
.++++||+||+|++|..+++.+...|++|+.+.++.. . +... ..+.. .. .|..+.+-.+ .+. ..+++
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 5789999999999999999998889999999986642 2 2222 22322 11 2333332222 222 23579
Q ss_pred cEEEEcCCC
Q psy9949 255 DVILDAAGI 263 (383)
Q Consensus 255 d~v~d~~g~ 263 (383)
|+++.++|.
T Consensus 88 d~vi~~ag~ 96 (254)
T PRK08085 88 DVLINNAGI 96 (254)
T ss_pred CEEEECCCc
Confidence 999999985
No 265
>PRK06128 oxidoreductase; Provisional
Probab=95.32 E-value=0.12 Score=47.51 Aligned_cols=76 Identities=16% Similarity=0.298 Sum_probs=49.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch---H----HHHHhcCCCee---eeCCChHHHHH----Hh-cCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA---K----DLVTSLNPNLV---IDYNEPEAMHS----IA-GAG 252 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~---~----~~~~~lg~~~v---~~~~~~~~~~~----i~-~~~ 252 (383)
.++++||+||+|++|..++..+...|++|+.+.++.+ . +.++..+.... .|..+....+. +. ..+
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 133 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG 133 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence 5679999999999999999988889999988764321 1 12233343211 24444332222 22 236
Q ss_pred CccEEEEcCCC
Q psy9949 253 PYDVILDAAGI 263 (383)
Q Consensus 253 g~d~v~d~~g~ 263 (383)
++|++|.++|.
T Consensus 134 ~iD~lV~nAg~ 144 (300)
T PRK06128 134 GLDILVNIAGK 144 (300)
T ss_pred CCCEEEECCcc
Confidence 79999999985
No 266
>PRK06197 short chain dehydrogenase; Provisional
Probab=95.30 E-value=0.1 Score=48.13 Aligned_cols=76 Identities=17% Similarity=0.275 Sum_probs=49.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHHh----c-CCC-ee--eeCCChHHH----HHHhc-CC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVTS----L-NPN-LV--IDYNEPEAM----HSIAG-AG 252 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~~----l-g~~-~v--~~~~~~~~~----~~i~~-~~ 252 (383)
.+++++|+||+|++|..+++.+...|++|++++++.. .+ ...+ . +.. .. .|..+..-. +.+.+ .+
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 94 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYP 94 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCC
Confidence 6789999999999999999988888999999886532 21 1111 1 111 11 244443222 22222 35
Q ss_pred CccEEEEcCCC
Q psy9949 253 PYDVILDAAGI 263 (383)
Q Consensus 253 g~d~v~d~~g~ 263 (383)
++|++|.++|.
T Consensus 95 ~iD~li~nAg~ 105 (306)
T PRK06197 95 RIDLLINNAGV 105 (306)
T ss_pred CCCEEEECCcc
Confidence 79999999984
No 267
>PRK08643 acetoin reductase; Validated
Probab=95.30 E-value=0.12 Score=46.04 Aligned_cols=75 Identities=19% Similarity=0.281 Sum_probs=49.4
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHH---hcCCCe-e--eeCCChHHHHH----Hh-cCCCcc
Q psy9949 189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVT---SLNPNL-V--IDYNEPEAMHS----IA-GAGPYD 255 (383)
Q Consensus 189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~---~lg~~~-v--~~~~~~~~~~~----i~-~~~g~d 255 (383)
+++++|+||+|++|..+++.+...|++|+.++++. +. +... +.+... . .|..+.+-..+ +. ..+++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 46899999999999999999988999999998654 22 2222 223221 1 24444332222 21 235799
Q ss_pred EEEEcCCC
Q psy9949 256 VILDAAGI 263 (383)
Q Consensus 256 ~v~d~~g~ 263 (383)
++|.++|.
T Consensus 82 ~vi~~ag~ 89 (256)
T PRK08643 82 VVVNNAGV 89 (256)
T ss_pred EEEECCCC
Confidence 99999975
No 268
>PRK09242 tropinone reductase; Provisional
Probab=95.30 E-value=0.094 Score=46.89 Aligned_cols=76 Identities=16% Similarity=0.222 Sum_probs=50.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhc-----CCCe-e--eeCCChHHH----HHHh-cCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSL-----NPNL-V--IDYNEPEAM----HSIA-GAG 252 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~l-----g~~~-v--~~~~~~~~~----~~i~-~~~ 252 (383)
.+++++|+|++|++|..++..+...|++|++++++.+ . +...++ +... . .|..+.+-. +.+. ..+
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999999999986542 2 222221 2211 1 244443222 2222 236
Q ss_pred CccEEEEcCCC
Q psy9949 253 PYDVILDAAGI 263 (383)
Q Consensus 253 g~d~v~d~~g~ 263 (383)
++|+++.++|.
T Consensus 88 ~id~li~~ag~ 98 (257)
T PRK09242 88 GLHILVNNAGG 98 (257)
T ss_pred CCCEEEECCCC
Confidence 79999999986
No 269
>PRK06138 short chain dehydrogenase; Provisional
Probab=95.29 E-value=0.081 Score=47.01 Aligned_cols=76 Identities=22% Similarity=0.368 Sum_probs=50.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhc--CCC-ee--eeCCChHHHHHH----h-cCCCcc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSL--NPN-LV--IDYNEPEAMHSI----A-GAGPYD 255 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~l--g~~-~v--~~~~~~~~~~~i----~-~~~g~d 255 (383)
++++++|+||+|++|..+++.+...|++|++++++.. . +...++ +.. .. .|..+.....++ . ..+++|
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 83 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD 83 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5679999999999999999888888999999996642 2 222222 221 12 244443322222 1 235799
Q ss_pred EEEEcCCC
Q psy9949 256 VILDAAGI 263 (383)
Q Consensus 256 ~v~d~~g~ 263 (383)
+++.++|.
T Consensus 84 ~vi~~ag~ 91 (252)
T PRK06138 84 VLVNNAGF 91 (252)
T ss_pred EEEECCCC
Confidence 99999985
No 270
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=95.29 E-value=0.1 Score=48.38 Aligned_cols=94 Identities=22% Similarity=0.247 Sum_probs=62.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecCch-HH----HHHhcCCCeeeeCCChHHHHHHhcCCCccEEEE
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDI--EVVTTCSGDA-KD----LVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILD 259 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~--~Vi~~~~~~~-~~----~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d 259 (383)
+++++||..| +| .|..++.+++..+. .|+++..+++ .+ .+++.|.+++..... +..+.+.+...+|+|+.
T Consensus 79 ~~g~~VLDIG-~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g-D~~~~~~~~~~fD~Ii~ 155 (322)
T PRK13943 79 DKGMRVLEIG-GG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG-DGYYGVPEFAPYDVIFV 155 (322)
T ss_pred CCCCEEEEEe-CC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC-ChhhcccccCCccEEEE
Confidence 7889999999 55 69999999998764 6888885543 23 334567665432221 22222223357999999
Q ss_pred cCCCCcccccccccccccCCCceEEEe
Q psy9949 260 AAGIPLDQINSYLPFLKTGKFSKFVTL 286 (383)
Q Consensus 260 ~~g~~~~~~~~~~~~l~~~~~G~~v~~ 286 (383)
+.+....... +++.++ ++|+++..
T Consensus 156 ~~g~~~ip~~-~~~~Lk--pgG~Lvv~ 179 (322)
T PRK13943 156 TVGVDEVPET-WFTQLK--EGGRVIVP 179 (322)
T ss_pred CCchHHhHHH-HHHhcC--CCCEEEEE
Confidence 8775544333 277888 99998764
No 271
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=95.28 E-value=0.07 Score=44.44 Aligned_cols=69 Identities=17% Similarity=0.238 Sum_probs=48.3
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHH-HhcCC--CeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949 191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLV-TSLNP--NLVIDYNEPEAMHSIAGAGPYDVILDAAGIP 264 (383)
Q Consensus 191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~-~~lg~--~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~ 264 (383)
+|.|+||+|-+|...++=|+.+|-.|++++++..+..+ ...-+ ..+++... .. ....|+|+||++.|..
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~~i~q~Difd~~~--~a---~~l~g~DaVIsA~~~~ 73 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGVTILQKDIFDLTS--LA---SDLAGHDAVISAFGAG 73 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccccceeecccccChhh--hH---hhhcCCceEEEeccCC
Confidence 58899999999999999999999999999987654322 11111 12333221 11 2246899999999876
No 272
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=95.26 E-value=0.14 Score=42.26 Aligned_cols=76 Identities=28% Similarity=0.507 Sum_probs=47.2
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC---chH-HHH---HhcCCC-ee--eeCCChHHHH----HHh-cCCC
Q psy9949 190 KRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG---DAK-DLV---TSLNPN-LV--IDYNEPEAMH----SIA-GAGP 253 (383)
Q Consensus 190 ~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~---~~~-~~~---~~lg~~-~v--~~~~~~~~~~----~i~-~~~g 253 (383)
++++|+||++++|..+++.+...|+ +|+.+.++ ++. ++. +..+.. .+ .|..+..-.+ .+. ..+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4799999999999998888887777 66666666 222 222 333422 11 2433332222 222 2357
Q ss_pred ccEEEEcCCCCc
Q psy9949 254 YDVILDAAGIPL 265 (383)
Q Consensus 254 ~d~v~d~~g~~~ 265 (383)
+|++|.++|...
T Consensus 81 ld~li~~ag~~~ 92 (167)
T PF00106_consen 81 LDILINNAGIFS 92 (167)
T ss_dssp ESEEEEECSCTT
T ss_pred cccccccccccc
Confidence 999999998754
No 273
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=95.26 E-value=0.15 Score=45.12 Aligned_cols=77 Identities=23% Similarity=0.409 Sum_probs=49.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-c-h-HHHH---HhcCCCee---eeCCChHHH----HHHhc-CCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-D-A-KDLV---TSLNPNLV---IDYNEPEAM----HSIAG-AGP 253 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~-~-~~~~---~~lg~~~v---~~~~~~~~~----~~i~~-~~g 253 (383)
++++++|+|++|++|..+++.+...|++|++..+. . + .+.. ++.+.... .|..+..-. +++.+ .++
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 36789999999999999999999999998886532 2 1 1222 23343322 344443222 22222 367
Q ss_pred ccEEEEcCCCC
Q psy9949 254 YDVILDAAGIP 264 (383)
Q Consensus 254 ~d~v~d~~g~~ 264 (383)
+|++|.++|..
T Consensus 82 id~li~~ag~~ 92 (246)
T PRK12938 82 IDVLVNNAGIT 92 (246)
T ss_pred CCEEEECCCCC
Confidence 99999999863
No 274
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=95.25 E-value=0.13 Score=46.03 Aligned_cols=75 Identities=16% Similarity=0.271 Sum_probs=48.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-c-hHH-HHHh----cCCC-ee--eeCCChHHHH----HHh-cCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-D-AKD-LVTS----LNPN-LV--IDYNEPEAMH----SIA-GAG 252 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~-~~~-~~~~----lg~~-~v--~~~~~~~~~~----~i~-~~~ 252 (383)
++++++|+||++++|..++..+...|++|+.+.+. + +.+ .+++ .+.. .. .|..+.+-.+ .+. +.+
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 86 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 57899999999999999999888999999887643 2 221 2222 2322 12 3444433222 222 235
Q ss_pred CccEEEEcCC
Q psy9949 253 PYDVILDAAG 262 (383)
Q Consensus 253 g~d~v~d~~g 262 (383)
.+|+++.++|
T Consensus 87 ~id~lv~nAg 96 (260)
T PRK08416 87 RVDFFISNAI 96 (260)
T ss_pred CccEEEECcc
Confidence 7999999986
No 275
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.24 E-value=0.13 Score=46.22 Aligned_cols=76 Identities=16% Similarity=0.279 Sum_probs=49.3
Q ss_pred CCCEEEEEcC--CchHHHHHHHHHHHCCCEEEEEecCch-HH----HHHhcCCCee--eeCCChHHH----HHHhc-CCC
Q psy9949 188 RDKRVLVLGA--SGGVGTMAVQLLKAWDIEVVTTCSGDA-KD----LVTSLNPNLV--IDYNEPEAM----HSIAG-AGP 253 (383)
Q Consensus 188 ~~~~VlI~ga--~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~----~~~~lg~~~v--~~~~~~~~~----~~i~~-~~g 253 (383)
++++++|+|| ++++|.++++.+...|++|+.+.+.++ .+ +.++.+.... .|..+.+-. +.+.+ .++
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG 84 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 5789999996 669999999988889999988765432 22 2223343222 344443222 22222 367
Q ss_pred ccEEEEcCCC
Q psy9949 254 YDVILDAAGI 263 (383)
Q Consensus 254 ~d~v~d~~g~ 263 (383)
+|++|+++|.
T Consensus 85 iD~lVnnAG~ 94 (261)
T PRK08690 85 LDGLVHSIGF 94 (261)
T ss_pred CcEEEECCcc
Confidence 9999999975
No 276
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=95.24 E-value=0.13 Score=46.64 Aligned_cols=76 Identities=21% Similarity=0.336 Sum_probs=50.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHH---hcCCC-ee--eeCCChHHHH----HHh-cCCCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVT---SLNPN-LV--IDYNEPEAMH----SIA-GAGPY 254 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~---~lg~~-~v--~~~~~~~~~~----~i~-~~~g~ 254 (383)
.+++++|+||+|++|..++..+...|++|++++++.. . +... +.+.. .. .|..+..... .+. ..+++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999999889999999886542 2 2222 22322 11 2444332222 222 23679
Q ss_pred cEEEEcCCC
Q psy9949 255 DVILDAAGI 263 (383)
Q Consensus 255 d~v~d~~g~ 263 (383)
|++|.++|.
T Consensus 89 d~li~~ag~ 97 (278)
T PRK08277 89 DILINGAGG 97 (278)
T ss_pred CEEEECCCC
Confidence 999999884
No 277
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=95.23 E-value=0.21 Score=48.05 Aligned_cols=94 Identities=15% Similarity=0.226 Sum_probs=59.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc-h-HHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD-A-KDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIP 264 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~-~-~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~ 264 (383)
.+.+|+|.| +|++|.+++..+...|+ +++++.++. + ..++.+++...++.++ ++.+ ....+|+||.|++.+
T Consensus 180 ~~kkvlviG-aG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~--~l~~---~l~~aDiVI~aT~a~ 253 (414)
T PRK13940 180 SSKNVLIIG-AGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLS--ELPQ---LIKKADIIIAAVNVL 253 (414)
T ss_pred cCCEEEEEc-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHH--HHHH---HhccCCEEEECcCCC
Confidence 678999999 89999999999999998 677777664 3 3466666522233221 1111 135699999999988
Q ss_pred cccccccccccccCCCceEEEecCCC
Q psy9949 265 LDQINSYLPFLKTGKFSKFVTLRSPF 290 (383)
Q Consensus 265 ~~~~~~~~~~l~~~~~G~~v~~~~~~ 290 (383)
..... .+.+. ++.=.+++++.|.
T Consensus 254 ~~vi~--~~~~~-~~~~~~iDLavPR 276 (414)
T PRK13940 254 EYIVT--CKYVG-DKPRVFIDISIPQ 276 (414)
T ss_pred CeeEC--HHHhC-CCCeEEEEeCCCC
Confidence 75443 22222 0112356666543
No 278
>PRK07074 short chain dehydrogenase; Provisional
Probab=95.23 E-value=0.15 Score=45.56 Aligned_cols=76 Identities=25% Similarity=0.395 Sum_probs=49.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCCC--ee--eeCCChHHHHH-Hh----cCCCccEE
Q psy9949 189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNPN--LV--IDYNEPEAMHS-IA----GAGPYDVI 257 (383)
Q Consensus 189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~~--~v--~~~~~~~~~~~-i~----~~~g~d~v 257 (383)
+++++|+||+|++|..++..+...|++|++++++. +. ++..++... .. .|..+.+.... +. ..+++|++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 45899999999999999988888899999998654 32 233333211 11 34444332221 11 12579999
Q ss_pred EEcCCCC
Q psy9949 258 LDAAGIP 264 (383)
Q Consensus 258 ~d~~g~~ 264 (383)
|.+.|..
T Consensus 82 i~~ag~~ 88 (257)
T PRK07074 82 VANAGAA 88 (257)
T ss_pred EECCCCC
Confidence 9999853
No 279
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=95.22 E-value=0.12 Score=48.73 Aligned_cols=76 Identities=18% Similarity=0.152 Sum_probs=49.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch--HHHHHhc--C--CCee-eeCCChHHHHHHhcCCCccEEEEc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA--KDLVTSL--N--PNLV-IDYNEPEAMHSIAGAGPYDVILDA 260 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~--~~~~~~l--g--~~~v-~~~~~~~~~~~i~~~~g~d~v~d~ 260 (383)
.+++|||+||+|.+|..+++.+...|.+|++++++.. ......+ + ...+ .|..+.....++.+..++|+||.+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~ 82 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL 82 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence 4689999999999999999999999999999885432 1121112 1 1111 244443333333333468999999
Q ss_pred CCC
Q psy9949 261 AGI 263 (383)
Q Consensus 261 ~g~ 263 (383)
++.
T Consensus 83 A~~ 85 (349)
T TIGR02622 83 AAQ 85 (349)
T ss_pred Ccc
Confidence 884
No 280
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.21 E-value=0.047 Score=48.04 Aligned_cols=73 Identities=22% Similarity=0.268 Sum_probs=47.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChH-HHHHHhcCCCccEEEEcCCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPE-AMHSIAGAGPYDVILDAAGI 263 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~i~~~~g~d~v~d~~g~ 263 (383)
.+++++|+|++|++|..++..+...|++|+++.++...... +.-..+..+-.+ +.+.+...+++|+++.++|.
T Consensus 4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~ 77 (235)
T PRK06550 4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLS---GNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGI 77 (235)
T ss_pred CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccccC---CcEEEEECChHHHHHHHHHhhCCCCEEEECCCC
Confidence 56799999999999999999888889999998865322110 101122222112 22223334679999999884
No 281
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.17 E-value=0.14 Score=45.85 Aligned_cols=76 Identities=17% Similarity=0.315 Sum_probs=50.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH-HHH---HhcCCC-ee--eeCCChHHHHHH----h-cCCCcc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLV---TSLNPN-LV--IDYNEPEAMHSI----A-GAGPYD 255 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~-~~~---~~lg~~-~v--~~~~~~~~~~~i----~-~~~g~d 255 (383)
.+++++|+||+|++|..+++.+...|++|+.+.++++. +.. ...+.. .. .|..+..-.+.+ . ..+.+|
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id 84 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID 84 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 56899999999999999999988899999999876532 222 222322 11 344443322222 1 235799
Q ss_pred EEEEcCCC
Q psy9949 256 VILDAAGI 263 (383)
Q Consensus 256 ~v~d~~g~ 263 (383)
++|.++|.
T Consensus 85 ~vi~~ag~ 92 (263)
T PRK08226 85 ILVNNAGV 92 (263)
T ss_pred EEEECCCc
Confidence 99999985
No 282
>PRK08263 short chain dehydrogenase; Provisional
Probab=95.16 E-value=0.11 Score=46.93 Aligned_cols=76 Identities=24% Similarity=0.309 Sum_probs=49.7
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHHhcCCC-ee--eeCCChHHH----HHHh-cCCCccEEE
Q psy9949 189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVTSLNPN-LV--IDYNEPEAM----HSIA-GAGPYDVIL 258 (383)
Q Consensus 189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~~lg~~-~v--~~~~~~~~~----~~i~-~~~g~d~v~ 258 (383)
+++++|+||+|++|..+++.+...|++|++++++.. .+ ....++.. .. .|..+..-. +.+. ..+++|.+|
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 468999999999999999888888999999986643 32 22333321 11 244432222 2222 135799999
Q ss_pred EcCCCC
Q psy9949 259 DAAGIP 264 (383)
Q Consensus 259 d~~g~~ 264 (383)
.++|..
T Consensus 83 ~~ag~~ 88 (275)
T PRK08263 83 NNAGYG 88 (275)
T ss_pred ECCCCc
Confidence 999864
No 283
>PRK09135 pteridine reductase; Provisional
Probab=95.16 E-value=0.15 Score=45.12 Aligned_cols=77 Identities=25% Similarity=0.394 Sum_probs=49.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-h-HH-H---HHhcCCC--ee--eeCCChHHHHHH-hc----C
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-A-KD-L---VTSLNPN--LV--IDYNEPEAMHSI-AG----A 251 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~-~~-~---~~~lg~~--~v--~~~~~~~~~~~i-~~----~ 251 (383)
..+++++|+|++|.+|..++..+...|++|+++++.. + .+ . +.+.... .. .|..+.+-...+ .+ .
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF 83 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3568999999999999999988888899999998642 2 22 1 1122111 11 244443322222 11 2
Q ss_pred CCccEEEEcCCC
Q psy9949 252 GPYDVILDAAGI 263 (383)
Q Consensus 252 ~g~d~v~d~~g~ 263 (383)
+++|++|.++|.
T Consensus 84 ~~~d~vi~~ag~ 95 (249)
T PRK09135 84 GRLDALVNNASS 95 (249)
T ss_pred CCCCEEEECCCC
Confidence 579999999984
No 284
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.15 E-value=0.13 Score=46.54 Aligned_cols=76 Identities=24% Similarity=0.332 Sum_probs=50.1
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecCch----H-HHHHhcCCCee--eeCCChH----HHHHHhc-CCC
Q psy9949 188 RDKRVLVLGAS--GGVGTMAVQLLKAWDIEVVTTCSGDA----K-DLVTSLNPNLV--IDYNEPE----AMHSIAG-AGP 253 (383)
Q Consensus 188 ~~~~VlI~ga~--g~vG~~ai~la~~~G~~Vi~~~~~~~----~-~~~~~lg~~~v--~~~~~~~----~~~~i~~-~~g 253 (383)
.+++++|+||+ +++|+++++.+...|++|+.+.++++ . ++.++++.... .|..+.. +.+.+.+ .+.
T Consensus 9 ~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 88 (272)
T PRK08159 9 AGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGK 88 (272)
T ss_pred cCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 56899999986 79999999999889999988775432 1 22334453222 3444332 2223322 367
Q ss_pred ccEEEEcCCC
Q psy9949 254 YDVILDAAGI 263 (383)
Q Consensus 254 ~d~v~d~~g~ 263 (383)
+|++++++|.
T Consensus 89 iD~lv~nAG~ 98 (272)
T PRK08159 89 LDFVVHAIGF 98 (272)
T ss_pred CcEEEECCcc
Confidence 9999999874
No 285
>PRK07023 short chain dehydrogenase; Provisional
Probab=95.10 E-value=0.12 Score=45.66 Aligned_cols=73 Identities=23% Similarity=0.373 Sum_probs=47.5
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCe---eeeCCChHHHHH-Hhc--------CCCccEEE
Q psy9949 191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNL---VIDYNEPEAMHS-IAG--------AGPYDVIL 258 (383)
Q Consensus 191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~---v~~~~~~~~~~~-i~~--------~~g~d~v~ 258 (383)
+++|+||+|++|..+++.+...|++|++++++...+.....+... ..|..+....+. +.+ ....|++|
T Consensus 3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 82 (243)
T PRK07023 3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLLI 82 (243)
T ss_pred eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceEEE
Confidence 699999999999999998888899999988664433333333221 134444332222 111 13688999
Q ss_pred EcCCC
Q psy9949 259 DAAGI 263 (383)
Q Consensus 259 d~~g~ 263 (383)
.++|.
T Consensus 83 ~~ag~ 87 (243)
T PRK07023 83 NNAGT 87 (243)
T ss_pred EcCcc
Confidence 98875
No 286
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=95.08 E-value=0.17 Score=45.48 Aligned_cols=76 Identities=22% Similarity=0.291 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-H---HHhcCCCe-e--eeCCChHHHH----HHhc-CCCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-L---VTSLNPNL-V--IDYNEPEAMH----SIAG-AGPY 254 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~---~~~lg~~~-v--~~~~~~~~~~----~i~~-~~g~ 254 (383)
.+++++|+|+++++|..++..+...|++|+.+.++. +.+ . .++.+... . .|..+..-.+ .+.+ .+++
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI 88 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 568999999999999999888888999998888654 222 2 22334321 1 3444332222 2222 3579
Q ss_pred cEEEEcCCC
Q psy9949 255 DVILDAAGI 263 (383)
Q Consensus 255 d~v~d~~g~ 263 (383)
|++|.++|.
T Consensus 89 d~li~~ag~ 97 (265)
T PRK07097 89 DILVNNAGI 97 (265)
T ss_pred CEEEECCCC
Confidence 999999985
No 287
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.08 E-value=0.16 Score=45.36 Aligned_cols=76 Identities=22% Similarity=0.302 Sum_probs=50.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHH----HhcCCC-ee--eeCCChHHH----HHHhc-CCCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLV----TSLNPN-LV--IDYNEPEAM----HSIAG-AGPY 254 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~----~~lg~~-~v--~~~~~~~~~----~~i~~-~~g~ 254 (383)
++++++|+||+|++|..+++.+...|++|+.++++. +.+.. .+.+.. .. .|..+.+-. +.+.+ .+++
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i 90 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV 90 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 578999999999999999998888999999998653 32222 222322 11 344443322 22222 3579
Q ss_pred cEEEEcCCC
Q psy9949 255 DVILDAAGI 263 (383)
Q Consensus 255 d~v~d~~g~ 263 (383)
|.+|.++|.
T Consensus 91 d~vi~~ag~ 99 (259)
T PRK08213 91 DILVNNAGA 99 (259)
T ss_pred CEEEECCCC
Confidence 999999885
No 288
>PRK06181 short chain dehydrogenase; Provisional
Probab=95.08 E-value=0.12 Score=46.31 Aligned_cols=74 Identities=27% Similarity=0.420 Sum_probs=48.5
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HH---HHhcCCC-ee--eeCCChHHHHHH-h----cCCCccE
Q psy9949 190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DL---VTSLNPN-LV--IDYNEPEAMHSI-A----GAGPYDV 256 (383)
Q Consensus 190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~---~~~lg~~-~v--~~~~~~~~~~~i-~----~~~g~d~ 256 (383)
.+++|+||+|++|..+++.+...|++|++++++.. . +. +...+.. .+ .|..+..-...+ . ..+++|+
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 81 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI 81 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 57999999999999999999899999999996642 2 22 2223332 11 244333222221 1 2357999
Q ss_pred EEEcCCC
Q psy9949 257 ILDAAGI 263 (383)
Q Consensus 257 v~d~~g~ 263 (383)
+|.++|.
T Consensus 82 vi~~ag~ 88 (263)
T PRK06181 82 LVNNAGI 88 (263)
T ss_pred EEECCCc
Confidence 9999875
No 289
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=95.08 E-value=0.43 Score=39.32 Aligned_cols=94 Identities=21% Similarity=0.174 Sum_probs=55.3
Q ss_pred hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHH
Q psy9949 165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEA 244 (383)
Q Consensus 165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~ 244 (383)
+||+....+..|.. -++. -+|++|+|.|.+.-+|.-+..++...|+.|+..-+.. .++
T Consensus 16 ~PcTp~aii~lL~~-~~~~---l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T------------------~~l 73 (160)
T PF02882_consen 16 VPCTPLAIIELLEY-YGID---LEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT------------------KNL 73 (160)
T ss_dssp --HHHHHHHHHHHH-TT-S---TTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS------------------SSH
T ss_pred cCCCHHHHHHHHHh-cCCC---CCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC------------------Ccc
Confidence 44444444444543 2321 4789999999888999999999999999888765431 112
Q ss_pred HHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949 245 MHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS 288 (383)
Q Consensus 245 ~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~ 288 (383)
.+.+ ...|+|+.++|.+.... .+.++ ++..++++|.
T Consensus 74 ~~~~---~~ADIVVsa~G~~~~i~---~~~ik--~gavVIDvG~ 109 (160)
T PF02882_consen 74 QEIT---RRADIVVSAVGKPNLIK---ADWIK--PGAVVIDVGI 109 (160)
T ss_dssp HHHH---TTSSEEEE-SSSTT-B----GGGS---TTEEEEE--C
T ss_pred ccee---eeccEEeeeeccccccc---ccccc--CCcEEEecCC
Confidence 2222 24789999999877533 45778 8888888864
No 290
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.07 E-value=0.13 Score=46.40 Aligned_cols=76 Identities=21% Similarity=0.302 Sum_probs=48.8
Q ss_pred CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEecCchH-HHHH----hcCCCee--eeCCChHHHH----HHhc-CCC
Q psy9949 188 RDKRVLVLGASG--GVGTMAVQLLKAWDIEVVTTCSGDAK-DLVT----SLNPNLV--IDYNEPEAMH----SIAG-AGP 253 (383)
Q Consensus 188 ~~~~VlI~ga~g--~vG~~ai~la~~~G~~Vi~~~~~~~~-~~~~----~lg~~~v--~~~~~~~~~~----~i~~-~~g 253 (383)
.+++++|+||++ ++|.++++.+...|++|+...++++. +.++ +.+.... .|..+.+-.+ .+.+ .+.
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 578999999875 89999988888899999887765321 2222 2232222 3444433222 2222 357
Q ss_pred ccEEEEcCCC
Q psy9949 254 YDVILDAAGI 263 (383)
Q Consensus 254 ~d~v~d~~g~ 263 (383)
+|++|+++|.
T Consensus 85 iD~linnAg~ 94 (262)
T PRK07984 85 FDGFVHSIGF 94 (262)
T ss_pred CCEEEECCcc
Confidence 9999999984
No 291
>PRK06482 short chain dehydrogenase; Provisional
Probab=95.07 E-value=0.12 Score=46.73 Aligned_cols=75 Identities=27% Similarity=0.343 Sum_probs=49.5
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHH-HhcCCC-ee--eeCCChHHHHH-H----hcCCCccEEEE
Q psy9949 190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLV-TSLNPN-LV--IDYNEPEAMHS-I----AGAGPYDVILD 259 (383)
Q Consensus 190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~-~~lg~~-~v--~~~~~~~~~~~-i----~~~~g~d~v~d 259 (383)
+++||+||+|++|..+++.+...|++|++++++.. .+.+ ...+.. .+ .|..+...... + ...+++|++|.
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 57999999999999999888888999999987643 3322 223321 11 34444332222 1 12367999999
Q ss_pred cCCCC
Q psy9949 260 AAGIP 264 (383)
Q Consensus 260 ~~g~~ 264 (383)
++|..
T Consensus 83 ~ag~~ 87 (276)
T PRK06482 83 NAGYG 87 (276)
T ss_pred CCCCC
Confidence 98853
No 292
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=95.07 E-value=0.051 Score=48.91 Aligned_cols=74 Identities=27% Similarity=0.337 Sum_probs=48.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCe-eeeCCChHHHH----HHh-cCCCccEEEEcC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNL-VIDYNEPEAMH----SIA-GAGPYDVILDAA 261 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~-v~~~~~~~~~~----~i~-~~~g~d~v~d~~ 261 (383)
.+++++|+|++|++|..+++.+...|++|+.++++.... ....... ..|..+..-.+ .+. ..+.+|++|.++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~A 85 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDG--QHENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNA 85 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccc--ccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 568999999999999999999999999999988553221 0111111 13444432222 222 236799999998
Q ss_pred CC
Q psy9949 262 GI 263 (383)
Q Consensus 262 g~ 263 (383)
|.
T Consensus 86 g~ 87 (266)
T PRK06171 86 GI 87 (266)
T ss_pred cc
Confidence 85
No 293
>PRK07985 oxidoreductase; Provisional
Probab=95.06 E-value=0.08 Score=48.58 Aligned_cols=76 Identities=17% Similarity=0.258 Sum_probs=49.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc---hHH----HHHhcCCCe-e--eeCCChHHHH----HHh-cCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD---AKD----LVTSLNPNL-V--IDYNEPEAMH----SIA-GAG 252 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~---~~~----~~~~lg~~~-v--~~~~~~~~~~----~i~-~~~ 252 (383)
++++++|+||+|++|..+++.+...|++|+.+.++. ..+ ...+.+... . .|..+.+... .+. ..+
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 127 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG 127 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 567999999999999999999998999998876432 222 122333221 1 3444433222 222 236
Q ss_pred CccEEEEcCCC
Q psy9949 253 PYDVILDAAGI 263 (383)
Q Consensus 253 g~d~v~d~~g~ 263 (383)
++|+++.++|.
T Consensus 128 ~id~lv~~Ag~ 138 (294)
T PRK07985 128 GLDIMALVAGK 138 (294)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 294
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.03 E-value=0.15 Score=45.75 Aligned_cols=76 Identities=18% Similarity=0.270 Sum_probs=49.5
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecCc----hHH-HHHhc-CCC-ee--eeCCChHH----HHHHhc-C
Q psy9949 188 RDKRVLVLGAS--GGVGTMAVQLLKAWDIEVVTTCSGD----AKD-LVTSL-NPN-LV--IDYNEPEA----MHSIAG-A 251 (383)
Q Consensus 188 ~~~~VlI~ga~--g~vG~~ai~la~~~G~~Vi~~~~~~----~~~-~~~~l-g~~-~v--~~~~~~~~----~~~i~~-~ 251 (383)
.+++++|+||+ +++|.++++.+...|++|+.+.++. +.+ ...++ +.. .. .|..+.+- .+.+.+ .
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 57899999986 7999999998888999999887532 222 33333 211 11 34444332 223322 3
Q ss_pred CCccEEEEcCCC
Q psy9949 252 GPYDVILDAAGI 263 (383)
Q Consensus 252 ~g~d~v~d~~g~ 263 (383)
+.+|+++.++|.
T Consensus 86 g~ld~lv~nag~ 97 (257)
T PRK08594 86 GVIHGVAHCIAF 97 (257)
T ss_pred CCccEEEECccc
Confidence 679999999874
No 295
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=95.02 E-value=0.13 Score=48.18 Aligned_cols=74 Identities=18% Similarity=0.174 Sum_probs=47.8
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch---HHHHHhc----------CCCee-eeCCChHHHHHHhcCCCcc
Q psy9949 190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA---KDLVTSL----------NPNLV-IDYNEPEAMHSIAGAGPYD 255 (383)
Q Consensus 190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~---~~~~~~l----------g~~~v-~~~~~~~~~~~i~~~~g~d 255 (383)
++|||+||+|-+|..+++.+...|.+|+++++... .+.+..+ +...+ .|..+.+....+.+..++|
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d 80 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT 80 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence 47999999999999999999999999999985431 1111111 12211 2444433333333334689
Q ss_pred EEEEcCCC
Q psy9949 256 VILDAAGI 263 (383)
Q Consensus 256 ~v~d~~g~ 263 (383)
+||.+++.
T Consensus 81 ~ViH~Aa~ 88 (343)
T TIGR01472 81 EIYNLAAQ 88 (343)
T ss_pred EEEECCcc
Confidence 99999874
No 296
>PRK07791 short chain dehydrogenase; Provisional
Probab=95.02 E-value=0.17 Score=46.27 Aligned_cols=77 Identities=26% Similarity=0.326 Sum_probs=50.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc----------hH-HHHHh---cCCCe-e--eeCCChH----HH
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD----------AK-DLVTS---LNPNL-V--IDYNEPE----AM 245 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~----------~~-~~~~~---lg~~~-v--~~~~~~~----~~ 245 (383)
-++++++|+||++++|..+++.+...|++|+++++.. +. +.+.+ .+... . .|..+.+ +.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 4678999999999999999988888999998887432 21 22222 23221 1 2444322 22
Q ss_pred HHHh-cCCCccEEEEcCCC
Q psy9949 246 HSIA-GAGPYDVILDAAGI 263 (383)
Q Consensus 246 ~~i~-~~~g~d~v~d~~g~ 263 (383)
+.+. ..+.+|++|.++|.
T Consensus 84 ~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHhcCCCCEEEECCCC
Confidence 2322 23679999999985
No 297
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=95.01 E-value=0.099 Score=49.00 Aligned_cols=76 Identities=16% Similarity=0.181 Sum_probs=49.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch---HHHHHhc-------CC--Ce-eeeCCChHHHHHHhcCCCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA---KDLVTSL-------NP--NL-VIDYNEPEAMHSIAGAGPY 254 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~---~~~~~~l-------g~--~~-v~~~~~~~~~~~i~~~~g~ 254 (383)
++++|||+||+|.+|..+++.+...|.+|+++++... .+.+..+ +. .. ..|..+......+.+..++
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 84 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKP 84 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCC
Confidence 5678999999999999999999999999999885421 1111111 11 11 1344443333333333368
Q ss_pred cEEEEcCCC
Q psy9949 255 DVILDAAGI 263 (383)
Q Consensus 255 d~v~d~~g~ 263 (383)
|+||.+++.
T Consensus 85 d~Vih~A~~ 93 (340)
T PLN02653 85 DEVYNLAAQ 93 (340)
T ss_pred CEEEECCcc
Confidence 999999875
No 298
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.00 E-value=0.27 Score=44.62 Aligned_cols=95 Identities=23% Similarity=0.204 Sum_probs=63.8
Q ss_pred hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHH
Q psy9949 165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEA 244 (383)
Q Consensus 165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~ 244 (383)
+||+.......+. ..++. -.|++|+|.|.+.-+|.-++.++...|++|+...+.. .++
T Consensus 138 ~PcTp~ai~~ll~-~~~i~---l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t------------------~~l 195 (286)
T PRK14175 138 VPCTPLGIMEILK-HADID---LEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS------------------KDM 195 (286)
T ss_pred CCCcHHHHHHHHH-HcCCC---CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc------------------hhH
Confidence 4454444444444 22221 3789999999666699999999999999998877531 122
Q ss_pred HHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCC
Q psy9949 245 MHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSP 289 (383)
Q Consensus 245 ~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~ 289 (383)
.+.+ ..+|+||.++|.+.... -+.++ ++..++++|.+
T Consensus 196 ~~~~---~~ADIVIsAvg~p~~i~---~~~vk--~gavVIDvGi~ 232 (286)
T PRK14175 196 ASYL---KDADVIVSAVGKPGLVT---KDVVK--EGAVIIDVGNT 232 (286)
T ss_pred HHHH---hhCCEEEECCCCCcccC---HHHcC--CCcEEEEcCCC
Confidence 2222 35899999999986533 34567 88788888653
No 299
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=94.97 E-value=0.2 Score=44.71 Aligned_cols=76 Identities=20% Similarity=0.291 Sum_probs=50.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHH---HhcCCC-ee--eeCCChHHHH----HHhc-CCCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLV---TSLNPN-LV--IDYNEPEAMH----SIAG-AGPY 254 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~---~~lg~~-~v--~~~~~~~~~~----~i~~-~~g~ 254 (383)
++++++|+||+|++|..++..+...|++|+.+.++. +. +.. ++.+.. .. .|..+..... .+.. .+.+
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 89 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL 89 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 678999999999999999988888899999999764 22 222 233322 12 3444433222 2222 3578
Q ss_pred cEEEEcCCC
Q psy9949 255 DVILDAAGI 263 (383)
Q Consensus 255 d~v~d~~g~ 263 (383)
|.+|.++|.
T Consensus 90 d~vi~~ag~ 98 (256)
T PRK06124 90 DILVNNVGA 98 (256)
T ss_pred CEEEECCCC
Confidence 999999885
No 300
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.96 E-value=0.18 Score=46.62 Aligned_cols=77 Identities=23% Similarity=0.362 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc--hH-HHH---HhcCCCee---eeCCChHHHHHH----hcCCCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD--AK-DLV---TSLNPNLV---IDYNEPEAMHSI----AGAGPY 254 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~--~~-~~~---~~lg~~~v---~~~~~~~~~~~i----~~~~g~ 254 (383)
++++++|+||++++|...+..+...|++|++.++.. .. +.+ +..|.... .|..+.+-.+++ .+.+++
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i 90 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL 90 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence 578999999999999999988888899999887432 22 222 22343211 233333222222 224679
Q ss_pred cEEEEcCCCC
Q psy9949 255 DVILDAAGIP 264 (383)
Q Consensus 255 d~v~d~~g~~ 264 (383)
|++|.++|..
T Consensus 91 D~li~nAG~~ 100 (306)
T PRK07792 91 DIVVNNAGIT 100 (306)
T ss_pred CEEEECCCCC
Confidence 9999999863
No 301
>PLN02780 ketoreductase/ oxidoreductase
Probab=94.96 E-value=0.11 Score=48.44 Aligned_cols=76 Identities=18% Similarity=0.297 Sum_probs=48.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHh----cCCCe----eeeCCC--hHHHHHHhc-CC--
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTS----LNPNL----VIDYNE--PEAMHSIAG-AG-- 252 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~----lg~~~----v~~~~~--~~~~~~i~~-~~-- 252 (383)
.|++++|+||++++|...+..+...|++|+.+++++ +.+ ...+ .+... ..|..+ .+..+.+.+ .+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~ 131 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL 131 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence 478999999999999998888888899999999764 322 2222 22111 134432 233333332 23
Q ss_pred CccEEEEcCCC
Q psy9949 253 PYDVILDAAGI 263 (383)
Q Consensus 253 g~d~v~d~~g~ 263 (383)
.+|++++++|.
T Consensus 132 didilVnnAG~ 142 (320)
T PLN02780 132 DVGVLINNVGV 142 (320)
T ss_pred CccEEEEecCc
Confidence 46699999875
No 302
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=94.92 E-value=0.2 Score=44.60 Aligned_cols=76 Identities=25% Similarity=0.354 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHh---cCCC-ee--eeCCChHHHHH----Hhc-CCCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTS---LNPN-LV--IDYNEPEAMHS----IAG-AGPY 254 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~---lg~~-~v--~~~~~~~~~~~----i~~-~~g~ 254 (383)
++++++|+|++|++|..+++.+...|++|++++++.. . +...+ .+.. .. .|..+...... +.+ .+++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4679999999999999999988888999999986542 2 22222 2322 11 34444332222 221 2579
Q ss_pred cEEEEcCCC
Q psy9949 255 DVILDAAGI 263 (383)
Q Consensus 255 d~v~d~~g~ 263 (383)
|++|.++|.
T Consensus 83 d~vi~~a~~ 91 (258)
T PRK12429 83 DILVNNAGI 91 (258)
T ss_pred CEEEECCCC
Confidence 999999874
No 303
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=94.91 E-value=0.21 Score=44.58 Aligned_cols=76 Identities=17% Similarity=0.304 Sum_probs=50.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-H---HHhcCCC-ee--eeCCChHHHHH----Hhc-CCCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-L---VTSLNPN-LV--IDYNEPEAMHS----IAG-AGPY 254 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~---~~~lg~~-~v--~~~~~~~~~~~----i~~-~~g~ 254 (383)
.+++++|+||++++|..++..+...|++|+.++++.+ .+ . .++.+.. .+ .|..+.+...+ +.+ .+++
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~ 89 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV 89 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999988889999998886542 22 2 2223322 12 34444332222 222 3579
Q ss_pred cEEEEcCCC
Q psy9949 255 DVILDAAGI 263 (383)
Q Consensus 255 d~v~d~~g~ 263 (383)
|+++.++|.
T Consensus 90 d~li~~ag~ 98 (255)
T PRK06113 90 DILVNNAGG 98 (255)
T ss_pred CEEEECCCC
Confidence 999999885
No 304
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=94.91 E-value=0.27 Score=43.35 Aligned_cols=76 Identities=28% Similarity=0.426 Sum_probs=48.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch--H-HH---HHhcCCCe-ee--eCCChHHHHH----Hh-cCCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA--K-DL---VTSLNPNL-VI--DYNEPEAMHS----IA-GAGP 253 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~--~-~~---~~~lg~~~-v~--~~~~~~~~~~----i~-~~~g 253 (383)
++++++|+|++|++|..++..+...|++|+++.++.. . +. .+..+... .+ |..+...... +. ...+
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4578999999999999999999988999877774432 1 11 22223221 22 4444332222 21 1357
Q ss_pred ccEEEEcCCC
Q psy9949 254 YDVILDAAGI 263 (383)
Q Consensus 254 ~d~v~d~~g~ 263 (383)
+|.+|.++|.
T Consensus 84 id~vi~~ag~ 93 (248)
T PRK05557 84 VDILVNNAGI 93 (248)
T ss_pred CCEEEECCCc
Confidence 8999999885
No 305
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=94.90 E-value=0.15 Score=45.01 Aligned_cols=76 Identities=24% Similarity=0.379 Sum_probs=49.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCCC-ee--eeCCChHHHHHH----h-cCCCccEE
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNPN-LV--IDYNEPEAMHSI----A-GAGPYDVI 257 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~~-~v--~~~~~~~~~~~i----~-~~~g~d~v 257 (383)
++.+++|+||+|++|..++..+...|+.|+...++. +. +....++.. .+ .|..+.+-.+.+ . ..+++|.+
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL 84 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 567999999999999999988888899888777543 33 233334422 12 233333222222 1 23579999
Q ss_pred EEcCCC
Q psy9949 258 LDAAGI 263 (383)
Q Consensus 258 ~d~~g~ 263 (383)
|.++|.
T Consensus 85 i~~ag~ 90 (245)
T PRK12936 85 VNNAGI 90 (245)
T ss_pred EECCCC
Confidence 999885
No 306
>PRK05875 short chain dehydrogenase; Provisional
Probab=94.90 E-value=0.17 Score=45.69 Aligned_cols=76 Identities=18% Similarity=0.187 Sum_probs=49.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHh---cC--CC-eee--eCCChHHHHHH-h----cCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTS---LN--PN-LVI--DYNEPEAMHSI-A----GAG 252 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~---lg--~~-~v~--~~~~~~~~~~i-~----~~~ 252 (383)
++++++|+|++|++|..+++.+...|++|++++++.+ . +...+ .+ .. .++ |..+.+-...+ . ..+
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999999999999986542 2 22222 11 11 122 43333222222 1 235
Q ss_pred CccEEEEcCCC
Q psy9949 253 PYDVILDAAGI 263 (383)
Q Consensus 253 g~d~v~d~~g~ 263 (383)
++|++|.++|.
T Consensus 86 ~~d~li~~ag~ 96 (276)
T PRK05875 86 RLHGVVHCAGG 96 (276)
T ss_pred CCCEEEECCCc
Confidence 79999999884
No 307
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=94.90 E-value=0.081 Score=46.42 Aligned_cols=73 Identities=23% Similarity=0.367 Sum_probs=51.5
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHH-HHH-hcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949 192 VLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKD-LVT-SLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGIP 264 (383)
Q Consensus 192 VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~-~~~-~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~~ 264 (383)
|||+||+|-+|..++..+...|..|+++.+..+.. ... ......+ .|..+.+..+.+.+...+|.||.+++..
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~ 76 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFS 76 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeeccc
Confidence 79999999999999999999999999888655432 222 2232222 4555555555554445889999998874
No 308
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.89 E-value=0.1 Score=51.57 Aligned_cols=72 Identities=17% Similarity=0.230 Sum_probs=51.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL 265 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~ 265 (383)
.++++|+|.| .|..|++++.+++..|++|++.+... +.+.++++|+.. +.... ..+.+ ..+|+||.+.|.+.
T Consensus 10 ~~~~~v~V~G-~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~~-~~~~~--~~~~l---~~~D~VV~SpGi~~ 82 (488)
T PRK03369 10 LPGAPVLVAG-AGVTGRAVLAALTRFGARPTVCDDDPDALRPHAERGVAT-VSTSD--AVQQI---ADYALVVTSPGFRP 82 (488)
T ss_pred cCCCeEEEEc-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCEE-EcCcc--hHhHh---hcCCEEEECCCCCC
Confidence 5788999999 89999999999999999999988443 334456677643 22211 11222 35799999999864
No 309
>PRK08703 short chain dehydrogenase; Provisional
Probab=94.89 E-value=0.18 Score=44.43 Aligned_cols=36 Identities=31% Similarity=0.408 Sum_probs=32.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD 223 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~ 223 (383)
++++++|+|++|++|..+++.+...|++|++++++.
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~ 40 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQ 40 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCh
Confidence 567999999999999999998888999999998764
No 310
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=94.87 E-value=0.16 Score=44.77 Aligned_cols=71 Identities=24% Similarity=0.394 Sum_probs=50.8
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH---HHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949 192 VLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK---DLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGIP 264 (383)
Q Consensus 192 VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~---~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~~ 264 (383)
|+|+||+|.+|..+++.+...+.+|.+.+|+.+. ..++..|+..+ .|+++.+... ....|+|.||.+++..
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~--~al~g~d~v~~~~~~~ 75 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLV--AALKGVDAVFSVTPPS 75 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHH--HHHTTCSEEEEESSCS
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHH--HHHcCCceEEeecCcc
Confidence 7899999999999999999988899999987643 34456787544 2444322221 1236999999998843
No 311
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.86 E-value=0.19 Score=44.24 Aligned_cols=77 Identities=21% Similarity=0.360 Sum_probs=49.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHH---HhcCCC-ee--eeCCChH-HHHHHh----cCCCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLV---TSLNPN-LV--IDYNEPE-AMHSIA----GAGPY 254 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~---~~lg~~-~v--~~~~~~~-~~~~i~----~~~g~ 254 (383)
.+.+++|.|++|++|..++..+...|++|++++++.. . +.. ...+.. .+ .|..+.+ +.+.+. ..+++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 4678999999999999999988889999999987642 2 222 222322 11 2333332 222222 13579
Q ss_pred cEEEEcCCCC
Q psy9949 255 DVILDAAGIP 264 (383)
Q Consensus 255 d~v~d~~g~~ 264 (383)
|++|.++|..
T Consensus 86 d~vi~~ag~~ 95 (239)
T PRK07666 86 DILINNAGIS 95 (239)
T ss_pred cEEEEcCccc
Confidence 9999998753
No 312
>PRK07775 short chain dehydrogenase; Provisional
Probab=94.83 E-value=0.26 Score=44.60 Aligned_cols=77 Identities=23% Similarity=0.357 Sum_probs=49.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HH---HHhcCCCe-e--eeCCChHHHHHHh-----cCCCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DL---VTSLNPNL-V--IDYNEPEAMHSIA-----GAGPY 254 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~---~~~lg~~~-v--~~~~~~~~~~~i~-----~~~g~ 254 (383)
+.++++|+||+|++|..+++.+...|++|++++++. +. +. ....+... . .|..+......+. ..+++
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI 88 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 456899999999999999998888899999888653 22 11 22234321 1 2433332222221 13578
Q ss_pred cEEEEcCCCC
Q psy9949 255 DVILDAAGIP 264 (383)
Q Consensus 255 d~v~d~~g~~ 264 (383)
|++|.++|..
T Consensus 89 d~vi~~Ag~~ 98 (274)
T PRK07775 89 EVLVSGAGDT 98 (274)
T ss_pred CEEEECCCcC
Confidence 9999999863
No 313
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=94.81 E-value=0.21 Score=44.43 Aligned_cols=73 Identities=27% Similarity=0.386 Sum_probs=48.4
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHhcCCCe-e--eeCCChHHHH----HHh-cCCCccEEEEc
Q psy9949 191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTSLNPNL-V--IDYNEPEAMH----SIA-GAGPYDVILDA 260 (383)
Q Consensus 191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~lg~~~-v--~~~~~~~~~~----~i~-~~~g~d~v~d~ 260 (383)
+++|+||+|++|..++..+...|++|++++++. +.+ ....++... . .|..+.+-.+ .+. ..+++|.++.+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ 81 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN 81 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 689999999999999999988999999998664 332 223344321 1 2444332222 222 23579999999
Q ss_pred CCC
Q psy9949 261 AGI 263 (383)
Q Consensus 261 ~g~ 263 (383)
+|.
T Consensus 82 ag~ 84 (248)
T PRK10538 82 AGL 84 (248)
T ss_pred CCc
Confidence 875
No 314
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=94.81 E-value=0.22 Score=44.45 Aligned_cols=75 Identities=15% Similarity=0.217 Sum_probs=48.6
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHh----cCCC--ee--eeCCChHHHHH----Hh-cCCC
Q psy9949 189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTS----LNPN--LV--IDYNEPEAMHS----IA-GAGP 253 (383)
Q Consensus 189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~----lg~~--~v--~~~~~~~~~~~----i~-~~~g 253 (383)
+++++|+||+|++|..++..+...|++|+.++++.. . +...+ .+.. .. .|..+.....+ +. ..++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999988888999999986532 2 22221 2211 12 24444332222 22 1357
Q ss_pred ccEEEEcCCC
Q psy9949 254 YDVILDAAGI 263 (383)
Q Consensus 254 ~d~v~d~~g~ 263 (383)
+|++|.++|.
T Consensus 82 id~vv~~ag~ 91 (259)
T PRK12384 82 VDLLVYNAGI 91 (259)
T ss_pred CCEEEECCCc
Confidence 9999999875
No 315
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=94.80 E-value=0.19 Score=46.53 Aligned_cols=75 Identities=23% Similarity=0.377 Sum_probs=49.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecCch-H-HHHHhcCC--C--ee--eeCCChH----HHHHHhc-CCCc
Q psy9949 189 DKRVLVLGASGGVGTMAVQLLKAWD-IEVVTTCSGDA-K-DLVTSLNP--N--LV--IDYNEPE----AMHSIAG-AGPY 254 (383)
Q Consensus 189 ~~~VlI~ga~g~vG~~ai~la~~~G-~~Vi~~~~~~~-~-~~~~~lg~--~--~v--~~~~~~~----~~~~i~~-~~g~ 254 (383)
+++++|+||++++|..++..+...| ++|+.++++++ . +...+++. . .+ .|..+.+ +.+.+.+ .+++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 5689999999999999988888889 89999986643 2 23333321 1 11 3444432 2233322 3579
Q ss_pred cEEEEcCCC
Q psy9949 255 DVILDAAGI 263 (383)
Q Consensus 255 d~v~d~~g~ 263 (383)
|++|.++|.
T Consensus 83 D~lI~nAG~ 91 (314)
T TIGR01289 83 DALVCNAAV 91 (314)
T ss_pred CEEEECCCc
Confidence 999999885
No 316
>CHL00194 ycf39 Ycf39; Provisional
Probab=94.80 E-value=0.18 Score=46.76 Aligned_cols=71 Identities=23% Similarity=0.259 Sum_probs=48.6
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949 191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGI 263 (383)
Q Consensus 191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~ 263 (383)
+|+|+||+|-+|..++..+...|.+|++++++.+ .......+...+ .|..+.+..... ..++|+||.+++.
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a--l~g~d~Vi~~~~~ 74 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPS--FKGVTAIIDASTS 74 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHH--HCCCCEEEECCCC
Confidence 6999999999999999999888999999997643 333334454433 244443222211 2479999998764
No 317
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=94.77 E-value=0.17 Score=44.93 Aligned_cols=77 Identities=21% Similarity=0.287 Sum_probs=49.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-H---HHHhcCCCe--e--eeCC---ChHH---HHHHhc-
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-D---LVTSLNPNL--V--IDYN---EPEA---MHSIAG- 250 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~---~~~~lg~~~--v--~~~~---~~~~---~~~i~~- 250 (383)
.++++++|+|++|++|..+++.+...|++|++++++. +. + .+++.+... + .|.. ..++ .+.+.+
T Consensus 10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 89 (247)
T PRK08945 10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQ 89 (247)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHH
Confidence 5788999999999999999988888899999998653 22 2 222333221 2 2322 1222 222222
Q ss_pred CCCccEEEEcCCC
Q psy9949 251 AGPYDVILDAAGI 263 (383)
Q Consensus 251 ~~g~d~v~d~~g~ 263 (383)
.+.+|.+|.++|.
T Consensus 90 ~~~id~vi~~Ag~ 102 (247)
T PRK08945 90 FGRLDGVLHNAGL 102 (247)
T ss_pred hCCCCEEEECCcc
Confidence 2579999998875
No 318
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.76 E-value=0.19 Score=45.11 Aligned_cols=76 Identities=21% Similarity=0.297 Sum_probs=48.7
Q ss_pred CCCEEEEEcC--CchHHHHHHHHHHHCCCEEEEEecCc----hH-HHHHhcCCCee--eeCCChHHH----HHHhc-CCC
Q psy9949 188 RDKRVLVLGA--SGGVGTMAVQLLKAWDIEVVTTCSGD----AK-DLVTSLNPNLV--IDYNEPEAM----HSIAG-AGP 253 (383)
Q Consensus 188 ~~~~VlI~ga--~g~vG~~ai~la~~~G~~Vi~~~~~~----~~-~~~~~lg~~~v--~~~~~~~~~----~~i~~-~~g 253 (383)
.+++++|+|| ++++|.++++.+...|++|+.+.+.+ +. ++..+++.... .|..+.+-. +.+.+ .+.
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG 84 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence 5789999996 57999999888888999998875332 11 22334443222 344443222 22222 367
Q ss_pred ccEEEEcCCC
Q psy9949 254 YDVILDAAGI 263 (383)
Q Consensus 254 ~d~v~d~~g~ 263 (383)
+|++++++|.
T Consensus 85 iD~lvnnAG~ 94 (260)
T PRK06997 85 LDGLVHSIGF 94 (260)
T ss_pred CcEEEEcccc
Confidence 9999999875
No 319
>PRK06914 short chain dehydrogenase; Provisional
Probab=94.72 E-value=0.2 Score=45.45 Aligned_cols=75 Identities=29% Similarity=0.449 Sum_probs=49.4
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-H---HHhcCC--C-ee--eeCCChHHHHHHh----cCCCc
Q psy9949 189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-L---VTSLNP--N-LV--IDYNEPEAMHSIA----GAGPY 254 (383)
Q Consensus 189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~---~~~lg~--~-~v--~~~~~~~~~~~i~----~~~g~ 254 (383)
+++++|+||+|++|..++..+...|++|++++++. +.+ . ....+. . .+ .|..+....+.+. ..+++
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i 82 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGRI 82 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCCe
Confidence 56899999999999999998888899999998653 222 2 122221 1 11 3444433222232 23679
Q ss_pred cEEEEcCCC
Q psy9949 255 DVILDAAGI 263 (383)
Q Consensus 255 d~v~d~~g~ 263 (383)
|+++.++|.
T Consensus 83 d~vv~~ag~ 91 (280)
T PRK06914 83 DLLVNNAGY 91 (280)
T ss_pred eEEEECCcc
Confidence 999999875
No 320
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.72 E-value=0.23 Score=44.02 Aligned_cols=76 Identities=20% Similarity=0.300 Sum_probs=48.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCch-H-HH---HHhcCCCe-e--eeCCChHHHHH----Hhc-CCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGDA-K-DL---VTSLNPNL-V--IDYNEPEAMHS----IAG-AGP 253 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~~-~-~~---~~~lg~~~-v--~~~~~~~~~~~----i~~-~~g 253 (383)
++++++|+||+|++|..++..+...|++|+... ++.. . +. .++.+... . .|..+...... +.+ .++
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR 82 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 467999999999999999999999999887754 4432 1 22 22334321 1 24334332222 221 257
Q ss_pred ccEEEEcCCC
Q psy9949 254 YDVILDAAGI 263 (383)
Q Consensus 254 ~d~v~d~~g~ 263 (383)
+|++|.++|.
T Consensus 83 id~vi~~ag~ 92 (250)
T PRK08063 83 LDVFVNNAAS 92 (250)
T ss_pred CCEEEECCCC
Confidence 9999999885
No 321
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=94.72 E-value=0.16 Score=45.07 Aligned_cols=73 Identities=26% Similarity=0.362 Sum_probs=49.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCC-ee--eeCCChHHHHHH----hc-CCCccEEEE
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPN-LV--IDYNEPEAMHSI----AG-AGPYDVILD 259 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~-~v--~~~~~~~~~~~i----~~-~~g~d~v~d 259 (383)
+++++||+|++|++|..++..+...|++|++++++. ....+.. .. .|..+.+..+.+ .+ .+.+|++|.
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF----LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVN 82 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch----hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 568999999999999999998888999999998664 1111211 11 244433222222 11 356999999
Q ss_pred cCCCC
Q psy9949 260 AAGIP 264 (383)
Q Consensus 260 ~~g~~ 264 (383)
++|..
T Consensus 83 ~ag~~ 87 (252)
T PRK08220 83 AAGIL 87 (252)
T ss_pred CCCcC
Confidence 98863
No 322
>PRK06701 short chain dehydrogenase; Provisional
Probab=94.71 E-value=0.23 Score=45.39 Aligned_cols=77 Identities=14% Similarity=0.252 Sum_probs=49.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-h-H-HH---HHhcCCCe-e--eeCCChHHHHHH----hc-CC
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-A-K-DL---VTSLNPNL-V--IDYNEPEAMHSI----AG-AG 252 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~-~-~~---~~~lg~~~-v--~~~~~~~~~~~i----~~-~~ 252 (383)
-++.++||+||+|++|..++..+...|++|+.+.+++ + . .. ++..+... + .|..+.+..+.+ .+ .+
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~ 123 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG 123 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3568999999999999999988888899999888543 2 1 11 22223221 1 344443322222 11 35
Q ss_pred CccEEEEcCCC
Q psy9949 253 PYDVILDAAGI 263 (383)
Q Consensus 253 g~d~v~d~~g~ 263 (383)
++|++|.++|.
T Consensus 124 ~iD~lI~~Ag~ 134 (290)
T PRK06701 124 RLDILVNNAAF 134 (290)
T ss_pred CCCEEEECCcc
Confidence 79999999885
No 323
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=94.66 E-value=0.15 Score=52.30 Aligned_cols=74 Identities=16% Similarity=0.275 Sum_probs=52.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc----------------------hHHHHHhcCCCeeeeCCC---h
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD----------------------AKDLVTSLNPNLVIDYNE---P 242 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~----------------------~~~~~~~lg~~~v~~~~~---~ 242 (383)
.+++|+|.| +|..|+.++..++..|.+|+++.+.+ +.+.++++|.+..++... .
T Consensus 309 ~~kkVaIIG-~GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIG-AGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 478999999 89999999999999999988887443 234556778765544321 1
Q ss_pred HHHHHHhcCCCccEEEEcCCCCc
Q psy9949 243 EAMHSIAGAGPYDVILDAAGIPL 265 (383)
Q Consensus 243 ~~~~~i~~~~g~d~v~d~~g~~~ 265 (383)
.+. .+ ..++|.||.++|...
T Consensus 388 ~~~-~l--~~~~DaV~latGa~~ 407 (639)
T PRK12809 388 TFS-DL--TSEYDAVFIGVGTYG 407 (639)
T ss_pred CHH-HH--HhcCCEEEEeCCCCC
Confidence 121 12 136999999999754
No 324
>PRK12937 short chain dehydrogenase; Provisional
Probab=94.65 E-value=0.3 Score=43.14 Aligned_cols=77 Identities=26% Similarity=0.424 Sum_probs=49.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch--H-HH---HHhcCCC-ee--eeCCChHHHHH-Hh----cCC
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA--K-DL---VTSLNPN-LV--IDYNEPEAMHS-IA----GAG 252 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~--~-~~---~~~lg~~-~v--~~~~~~~~~~~-i~----~~~ 252 (383)
.++++++|+|++|++|..++..+...|++++.+.++.. . +. ....+.. .. .|..+.+-.++ +. ..+
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG 82 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 36789999999999999999999999999888775422 1 12 2223322 12 23333322222 22 235
Q ss_pred CccEEEEcCCC
Q psy9949 253 PYDVILDAAGI 263 (383)
Q Consensus 253 g~d~v~d~~g~ 263 (383)
++|++|.++|.
T Consensus 83 ~id~vi~~ag~ 93 (245)
T PRK12937 83 RIDVLVNNAGV 93 (245)
T ss_pred CCCEEEECCCC
Confidence 79999999885
No 325
>PRK08251 short chain dehydrogenase; Provisional
Probab=94.64 E-value=0.17 Score=44.89 Aligned_cols=75 Identities=21% Similarity=0.336 Sum_probs=48.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHH---hc--CCC-ee--eeCCChHHHH----HHh-cCCC
Q psy9949 189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVT---SL--NPN-LV--IDYNEPEAMH----SIA-GAGP 253 (383)
Q Consensus 189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~---~l--g~~-~v--~~~~~~~~~~----~i~-~~~g 253 (383)
+++++|+||+|++|..+++.+...|++|++++++. +.+ ... +. +.. .+ .|..+..-.. ++. ..++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999998888888899999888653 322 211 11 211 12 3444432222 222 2357
Q ss_pred ccEEEEcCCC
Q psy9949 254 YDVILDAAGI 263 (383)
Q Consensus 254 ~d~v~d~~g~ 263 (383)
+|++|.++|.
T Consensus 82 id~vi~~ag~ 91 (248)
T PRK08251 82 LDRVIVNAGI 91 (248)
T ss_pred CCEEEECCCc
Confidence 9999999874
No 326
>PRK09134 short chain dehydrogenase; Provisional
Probab=94.62 E-value=0.33 Score=43.36 Aligned_cols=77 Identities=18% Similarity=0.342 Sum_probs=49.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc--hHH-HHH---hcCCC-ee--eeCCChHHHH----HHhc-CC
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD--AKD-LVT---SLNPN-LV--IDYNEPEAMH----SIAG-AG 252 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~--~~~-~~~---~lg~~-~v--~~~~~~~~~~----~i~~-~~ 252 (383)
..+++++|+||+|++|..++..+...|++|+++++.+ +.+ ... ..+.. .. .|..+..-.. ++.+ .+
T Consensus 7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 86 (258)
T PRK09134 7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG 86 (258)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4577999999999999999988888999998877432 222 222 22332 11 2444432222 2221 35
Q ss_pred CccEEEEcCCC
Q psy9949 253 PYDVILDAAGI 263 (383)
Q Consensus 253 g~d~v~d~~g~ 263 (383)
++|++|.++|.
T Consensus 87 ~iD~vi~~ag~ 97 (258)
T PRK09134 87 PITLLVNNASL 97 (258)
T ss_pred CCCEEEECCcC
Confidence 79999999985
No 327
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=94.59 E-value=0.28 Score=46.32 Aligned_cols=78 Identities=21% Similarity=0.244 Sum_probs=49.5
Q ss_pred CCCCEEEEEcCCchHHHH--HHHHHHHCCCEEEEEecCc---h--------------HHHHHhcCCC-eee--eCCChHH
Q psy9949 187 PRDKRVLVLGASGGVGTM--AVQLLKAWDIEVVTTCSGD---A--------------KDLVTSLNPN-LVI--DYNEPEA 244 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~--ai~la~~~G~~Vi~~~~~~---~--------------~~~~~~lg~~-~v~--~~~~~~~ 244 (383)
..++++||+|+++++|++ +++.+ ..|++|+++.... + .+.+++.|.. ..+ |..+..-
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 346899999999999999 55566 7899888887321 1 1234455643 222 3333222
Q ss_pred ----HHHHhc-CCCccEEEEcCCCCc
Q psy9949 245 ----MHSIAG-AGPYDVILDAAGIPL 265 (383)
Q Consensus 245 ----~~~i~~-~~g~d~v~d~~g~~~ 265 (383)
.+.+.+ .+++|+++.+++.+.
T Consensus 118 v~~lie~I~e~~G~IDiLVnSaA~~~ 143 (398)
T PRK13656 118 KQKVIELIKQDLGQVDLVVYSLASPR 143 (398)
T ss_pred HHHHHHHHHHhcCCCCEEEECCccCC
Confidence 223332 367999999998763
No 328
>PRK05650 short chain dehydrogenase; Provisional
Probab=94.59 E-value=0.24 Score=44.64 Aligned_cols=74 Identities=18% Similarity=0.250 Sum_probs=47.7
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HH---HHhcCCCe-e--eeCCChHHHHH----Hhc-CCCccEE
Q psy9949 191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DL---VTSLNPNL-V--IDYNEPEAMHS----IAG-AGPYDVI 257 (383)
Q Consensus 191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~---~~~lg~~~-v--~~~~~~~~~~~----i~~-~~g~d~v 257 (383)
+++|+||+|++|..++..+...|++|++++++.. . +. ++..+.+. + .|..+....+. +.. .+++|++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l 81 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI 81 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 6999999999999999888888999999986542 2 22 22233221 1 23333222222 221 2579999
Q ss_pred EEcCCCC
Q psy9949 258 LDAAGIP 264 (383)
Q Consensus 258 ~d~~g~~ 264 (383)
|.++|..
T Consensus 82 I~~ag~~ 88 (270)
T PRK05650 82 VNNAGVA 88 (270)
T ss_pred EECCCCC
Confidence 9999853
No 329
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=94.56 E-value=0.24 Score=43.87 Aligned_cols=77 Identities=23% Similarity=0.299 Sum_probs=49.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HH---HHhcCCC-ee--eeCCChHHHHHHh-----cCCCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DL---VTSLNPN-LV--IDYNEPEAMHSIA-----GAGPY 254 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~---~~~lg~~-~v--~~~~~~~~~~~i~-----~~~g~ 254 (383)
.+++++|+||+|.+|..++..+...|++|++++++.. . +. +.+.+.. .+ .|..+.+-.+... ..+.+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 5679999999999999999888888999999997632 2 12 2223322 12 2444432222221 12479
Q ss_pred cEEEEcCCCC
Q psy9949 255 DVILDAAGIP 264 (383)
Q Consensus 255 d~v~d~~g~~ 264 (383)
|++|.++|..
T Consensus 85 d~vi~~ag~~ 94 (251)
T PRK12826 85 DILVANAGIF 94 (251)
T ss_pred CEEEECCCCC
Confidence 9999998753
No 330
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=94.56 E-value=0.28 Score=43.42 Aligned_cols=76 Identities=22% Similarity=0.361 Sum_probs=48.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC--chH-HH---HHhcCCCe-e--eeCCChHHHH----HHhc-CCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG--DAK-DL---VTSLNPNL-V--IDYNEPEAMH----SIAG-AGP 253 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~--~~~-~~---~~~lg~~~-v--~~~~~~~~~~----~i~~-~~g 253 (383)
++++++|+||+|++|..++..+...|++|+++.+. ++. +. +++.+... . .|..+..-.+ .+.+ .+.
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK 84 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 47899999999999999999888889998876632 222 22 22333221 1 2333332222 2222 256
Q ss_pred ccEEEEcCCC
Q psy9949 254 YDVILDAAGI 263 (383)
Q Consensus 254 ~d~v~d~~g~ 263 (383)
+|++|.++|.
T Consensus 85 id~vi~~ag~ 94 (247)
T PRK12935 85 VDILVNNAGI 94 (247)
T ss_pred CCEEEECCCC
Confidence 8999999886
No 331
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=94.55 E-value=0.18 Score=45.34 Aligned_cols=74 Identities=22% Similarity=0.271 Sum_probs=47.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC--chH-HHHHhc----CCC-ee--eeCCChH----HHHHH----h-c
Q psy9949 190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG--DAK-DLVTSL----NPN-LV--IDYNEPE----AMHSI----A-G 250 (383)
Q Consensus 190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~--~~~-~~~~~l----g~~-~v--~~~~~~~----~~~~i----~-~ 250 (383)
.+++|+||++++|+.+++.+...|++|+++++. ++. +.+.++ +.. .. .|..+.+ ..+++ . .
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 479999999999999999999999999988743 222 222332 211 11 2444322 11222 1 2
Q ss_pred CCCccEEEEcCCC
Q psy9949 251 AGPYDVILDAAGI 263 (383)
Q Consensus 251 ~~g~d~v~d~~g~ 263 (383)
.+++|++|.++|.
T Consensus 82 ~g~iD~lv~nAG~ 94 (267)
T TIGR02685 82 FGRCDVLVNNASA 94 (267)
T ss_pred cCCceEEEECCcc
Confidence 3579999999985
No 332
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=94.53 E-value=0.2 Score=44.68 Aligned_cols=74 Identities=26% Similarity=0.327 Sum_probs=48.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH-H-HHHh-cCCCee-eeCCCh--HHHHHHhcCCCccEEEEcC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-D-LVTS-LNPNLV-IDYNEP--EAMHSIAGAGPYDVILDAA 261 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~-~-~~~~-lg~~~v-~~~~~~--~~~~~i~~~~g~d~v~d~~ 261 (383)
.+.+|+|+||+|.+|..+++.+...|.+|+++.++.+. . .... .++..+ .|..+. .+.+.+ ..++|+||.++
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~--~~~~d~vi~~~ 93 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAI--GDDSDAVICAT 93 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHh--hcCCCEEEECC
Confidence 45789999999999999998888889999998866432 2 1111 122222 344431 222222 13799999988
Q ss_pred CC
Q psy9949 262 GI 263 (383)
Q Consensus 262 g~ 263 (383)
|.
T Consensus 94 g~ 95 (251)
T PLN00141 94 GF 95 (251)
T ss_pred CC
Confidence 75
No 333
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.52 E-value=0.037 Score=54.18 Aligned_cols=88 Identities=18% Similarity=0.157 Sum_probs=55.0
Q ss_pred CCCCEEE----EEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHHHhcCCC-eeeeCCChHHHHHHhcCCCccEEEEc
Q psy9949 187 PRDKRVL----VLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLVTSLNPN-LVIDYNEPEAMHSIAGAGPYDVILDA 260 (383)
Q Consensus 187 ~~~~~Vl----I~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~~~lg~~-~v~~~~~~~~~~~i~~~~g~d~v~d~ 260 (383)
++++.++ |+||+|++|.+++|+++..|++|+++.+... ....+..+.+ .++|.+...+.+++....
T Consensus 32 ~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~-------- 103 (450)
T PRK08261 32 RPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGWGDRFGALVFDATGITDPADLKALY-------- 103 (450)
T ss_pred CCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCcCCcccEEEEECCCCCCHHHHHHHH--------
Confidence 7888888 8888999999999999999999999875533 2222223333 345544433333332110
Q ss_pred CCCCcccccccccccccCCCceEEEecCC
Q psy9949 261 AGIPLDQINSYLPFLKTGKFSKFVTLRSP 289 (383)
Q Consensus 261 ~g~~~~~~~~~~~~l~~~~~G~~v~~~~~ 289 (383)
...... ++.+. ++|+++.+++.
T Consensus 104 ---~~~~~~--l~~l~--~~griv~i~s~ 125 (450)
T PRK08261 104 ---EFFHPV--LRSLA--PCGRVVVLGRP 125 (450)
T ss_pred ---HHHHHH--HHhcc--CCCEEEEEccc
Confidence 001112 56667 78888888653
No 334
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=94.51 E-value=0.33 Score=43.01 Aligned_cols=76 Identities=22% Similarity=0.394 Sum_probs=49.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HH---HHhcCCC-ee--eeCCChHHHHHH-h---c-CCCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DL---VTSLNPN-LV--IDYNEPEAMHSI-A---G-AGPY 254 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~---~~~lg~~-~v--~~~~~~~~~~~i-~---~-~~g~ 254 (383)
+++++||+||+|++|..+++.+...|++|+.++++.. . +. .++.+.. .+ .|..+....+.+ . + .+++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999999999999999999889999999886542 2 11 2222322 12 233333322222 1 1 2579
Q ss_pred cEEEEcCCC
Q psy9949 255 DVILDAAGI 263 (383)
Q Consensus 255 d~v~d~~g~ 263 (383)
|++|.++|.
T Consensus 82 d~vi~~ag~ 90 (250)
T TIGR03206 82 DVLVNNAGW 90 (250)
T ss_pred CEEEECCCC
Confidence 999999984
No 335
>KOG1208|consensus
Probab=94.48 E-value=0.24 Score=45.83 Aligned_cols=76 Identities=24% Similarity=0.415 Sum_probs=53.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHh----cCCCee----eeCCCh----HHHHHHhc-CC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTS----LNPNLV----IDYNEP----EAMHSIAG-AG 252 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~----lg~~~v----~~~~~~----~~~~~i~~-~~ 252 (383)
.+.+++|+|+++|+|..++..+...|++|+..+++.+ . +..++ .....+ .|-.+. .|.+.+.. ..
T Consensus 34 ~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~ 113 (314)
T KOG1208|consen 34 SGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEG 113 (314)
T ss_pred CCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCC
Confidence 5689999999999999999999999999999998853 2 22222 222222 243332 34444433 35
Q ss_pred CccEEEEcCCC
Q psy9949 253 PYDVILDAAGI 263 (383)
Q Consensus 253 g~d~v~d~~g~ 263 (383)
+.|+.++++|.
T Consensus 114 ~ldvLInNAGV 124 (314)
T KOG1208|consen 114 PLDVLINNAGV 124 (314)
T ss_pred CccEEEeCccc
Confidence 79999998885
No 336
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=94.45 E-value=0.32 Score=38.43 Aligned_cols=90 Identities=19% Similarity=0.316 Sum_probs=54.7
Q ss_pred EEEEcCCchHHHHHHHHHHHCC--CEEEEEecCchH----HHHHhcCCCeeeeCCChH---HHHHH--------------
Q psy9949 192 VLVLGASGGVGTMAVQLLKAWD--IEVVTTCSGDAK----DLVTSLNPNLVIDYNEPE---AMHSI-------------- 248 (383)
Q Consensus 192 VlI~ga~g~vG~~ai~la~~~G--~~Vi~~~~~~~~----~~~~~lg~~~v~~~~~~~---~~~~i-------------- 248 (383)
|.|+|++|.+|..++.+.+... ++|++..-..+. +.++++....+.-.+... +.+.+
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~ 80 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE 80 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence 6799999999999999999886 589988833322 456778887776555432 22222
Q ss_pred -----hcCCCccEEEEcCCCCcccccccccccccCCCceEE
Q psy9949 249 -----AGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFV 284 (383)
Q Consensus 249 -----~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v 284 (383)
.+...+|+++.+..+-...... +..++ .+-++.
T Consensus 81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt-~~Ai~--~gk~ia 118 (129)
T PF02670_consen 81 GLEELAEEPEVDIVVNAIVGFAGLKPT-LAAIK--AGKDIA 118 (129)
T ss_dssp HHHHHHTHTT-SEEEE--SSGGGHHHH-HHHHH--TTSEEE
T ss_pred HHHHHhcCCCCCEEEEeCcccchHHHH-HHHHH--CCCeEE
Confidence 1124689999886665443322 55666 443443
No 337
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=94.44 E-value=0.58 Score=37.66 Aligned_cols=76 Identities=21% Similarity=0.206 Sum_probs=56.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD 266 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~ 266 (383)
-+|++|+|+|.+..+|.-++.++...|++|+...+..+ ++.+.+ ...|+|+-++|.+..
T Consensus 26 ~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~------------------~l~~~v---~~ADIVvsAtg~~~~ 84 (140)
T cd05212 26 LDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI------------------QLQSKV---HDADVVVVGSPKPEK 84 (140)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc------------------CHHHHH---hhCCEEEEecCCCCc
Confidence 37899999999999999999999999999988874321 111111 358999999998854
Q ss_pred cccccccccccCCCceEEEecC
Q psy9949 267 QINSYLPFLKTGKFSKFVTLRS 288 (383)
Q Consensus 267 ~~~~~~~~l~~~~~G~~v~~~~ 288 (383)
.. -+.++ ++..++.++.
T Consensus 85 -i~--~~~ik--pGa~Vidvg~ 101 (140)
T cd05212 85 -VP--TEWIK--PGATVINCSP 101 (140)
T ss_pred -cC--HHHcC--CCCEEEEcCC
Confidence 33 56788 8888887753
No 338
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=94.41 E-value=0.14 Score=46.63 Aligned_cols=60 Identities=32% Similarity=0.433 Sum_probs=41.9
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949 191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGI 263 (383)
Q Consensus 191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~ 263 (383)
+|+|+||+|.+|..++..+...|.+|+++++. ..|..+.+....+.+...+|+||++++.
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~ 60 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS-------------QLDLTDPEALERLLRAIRPDAVVNTAAY 60 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-------------ccCCCCHHHHHHHHHhCCCCEEEECCcc
Confidence 48999999999999999999899999998864 1222232222222222357888888874
No 339
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.38 E-value=0.46 Score=42.99 Aligned_cols=94 Identities=19% Similarity=0.114 Sum_probs=63.8
Q ss_pred hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHH
Q psy9949 165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEA 244 (383)
Q Consensus 165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~ 244 (383)
+||+.......|. .-+++ -.|++|+|.|.+..+|.-++.++...|++|+..-+. ..++
T Consensus 137 ~PcTp~avi~lL~-~~~i~---l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~------------------t~~l 194 (285)
T PRK14191 137 VPATPMGVMRLLK-HYHIE---IKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHIL------------------TKDL 194 (285)
T ss_pred CCCcHHHHHHHHH-HhCCC---CCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCC------------------cHHH
Confidence 3455444444444 33331 279999999977799999999999999998765322 1122
Q ss_pred HHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949 245 MHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS 288 (383)
Q Consensus 245 ~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~ 288 (383)
.+.+ ...|+++-++|.+.... -+.++ ++..++++|-
T Consensus 195 ~~~~---~~ADIvV~AvG~p~~i~---~~~vk--~GavVIDvGi 230 (285)
T PRK14191 195 SFYT---QNADIVCVGVGKPDLIK---ASMVK--KGAVVVDIGI 230 (285)
T ss_pred HHHH---HhCCEEEEecCCCCcCC---HHHcC--CCcEEEEeec
Confidence 2222 35899999999887633 45677 8888888864
No 340
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.38 E-value=0.65 Score=42.09 Aligned_cols=95 Identities=20% Similarity=0.134 Sum_probs=64.5
Q ss_pred hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHH
Q psy9949 165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEA 244 (383)
Q Consensus 165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~ 244 (383)
+||+.......|. .-++. -.|++|+|.|.+.-+|.-+..++...+++|+...+. ..++
T Consensus 138 ~PcTp~av~~lL~-~~~i~---l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~------------------t~~l 195 (284)
T PRK14190 138 LPCTPHGILELLK-EYNID---ISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSK------------------TKNL 195 (284)
T ss_pred CCCCHHHHHHHHH-HcCCC---CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCC------------------chhH
Confidence 4544444444444 23331 379999999999999999999999999988865332 1122
Q ss_pred HHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCC
Q psy9949 245 MHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSP 289 (383)
Q Consensus 245 ~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~ 289 (383)
.+.+ ...|+++-++|.+.... -+.++ ++..++++|-.
T Consensus 196 ~~~~---~~ADIvI~AvG~p~~i~---~~~ik--~gavVIDvGi~ 232 (284)
T PRK14190 196 AELT---KQADILIVAVGKPKLIT---ADMVK--EGAVVIDVGVN 232 (284)
T ss_pred HHHH---HhCCEEEEecCCCCcCC---HHHcC--CCCEEEEeecc
Confidence 2222 25899999999888533 45778 88888988643
No 341
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=94.35 E-value=0.21 Score=44.70 Aligned_cols=76 Identities=21% Similarity=0.317 Sum_probs=49.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch--HH-H---HHhcCCC-ee--eeCCChHHHHH----Hh-cCCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA--KD-L---VTSLNPN-LV--IDYNEPEAMHS----IA-GAGP 253 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~--~~-~---~~~lg~~-~v--~~~~~~~~~~~----i~-~~~g 253 (383)
++++++|+||+|++|..+++.+...|++|+.+.+++. .+ . ++..+.. .. .|..+...... +. ..++
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~ 85 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT 85 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 6789999999999999999999999998888775431 11 1 2223322 11 34444332222 22 2357
Q ss_pred ccEEEEcCCC
Q psy9949 254 YDVILDAAGI 263 (383)
Q Consensus 254 ~d~v~d~~g~ 263 (383)
+|+++.++|.
T Consensus 86 id~lv~~ag~ 95 (261)
T PRK08936 86 LDVMINNAGI 95 (261)
T ss_pred CCEEEECCCC
Confidence 9999999885
No 342
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.34 E-value=0.35 Score=43.00 Aligned_cols=74 Identities=20% Similarity=0.305 Sum_probs=48.2
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch--H-HH---HHhcCCC-ee--eeCCChHH----HHHHhc-CCCcc
Q psy9949 190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA--K-DL---VTSLNPN-LV--IDYNEPEA----MHSIAG-AGPYD 255 (383)
Q Consensus 190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~--~-~~---~~~lg~~-~v--~~~~~~~~----~~~i~~-~~g~d 255 (383)
++++|+|++|++|..++..+...|++|+++++... . +. .+..+.. .+ .|..+.+- .+.+.+ .+.+|
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID 82 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 57999999999999999999889999999885432 1 11 2222321 12 34444332 222322 25799
Q ss_pred EEEEcCCC
Q psy9949 256 VILDAAGI 263 (383)
Q Consensus 256 ~v~d~~g~ 263 (383)
++|.++|.
T Consensus 83 ~vi~~ag~ 90 (256)
T PRK12745 83 CLVNNAGV 90 (256)
T ss_pred EEEECCcc
Confidence 99999875
No 343
>KOG1210|consensus
Probab=94.33 E-value=0.29 Score=44.44 Aligned_cols=78 Identities=21% Similarity=0.317 Sum_probs=52.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcCC----Cee----eeCCChHHHHHH-hcC----
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLNP----NLV----IDYNEPEAMHSI-AGA---- 251 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg~----~~v----~~~~~~~~~~~i-~~~---- 251 (383)
++..+++|.|++.++|++.+.-++..|++|..+.++.+ + +..+.++. ..| .|-.+.+-.+.+ .+.
T Consensus 31 k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~ 110 (331)
T KOG1210|consen 31 KPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLE 110 (331)
T ss_pred CccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhcc
Confidence 45579999999999999999999999999999997754 3 33344432 111 111111222222 222
Q ss_pred CCccEEEEcCCCC
Q psy9949 252 GPYDVILDAAGIP 264 (383)
Q Consensus 252 ~g~d~v~d~~g~~ 264 (383)
+.+|.+|.|+|..
T Consensus 111 ~~~d~l~~cAG~~ 123 (331)
T KOG1210|consen 111 GPIDNLFCCAGVA 123 (331)
T ss_pred CCcceEEEecCcc
Confidence 4689999999974
No 344
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=94.32 E-value=0.19 Score=43.69 Aligned_cols=96 Identities=23% Similarity=0.152 Sum_probs=60.5
Q ss_pred hhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecCch-HH----HHHhcCCCee--eeCCChHHHHHHh
Q psy9949 179 TAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWD--IEVVTTCSGDA-KD----LVTSLNPNLV--IDYNEPEAMHSIA 249 (383)
Q Consensus 179 ~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G--~~Vi~~~~~~~-~~----~~~~lg~~~v--~~~~~~~~~~~i~ 249 (383)
...+ +++++||-.| +|.|..+..+++..+ .+|+++..+++ .+ .+++.|..++ +..+.. +...
T Consensus 71 ~l~~----~~g~~VLdIG--~GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~---~~~~ 141 (212)
T PRK13942 71 LLDL----KEGMKVLEIG--TGSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGT---LGYE 141 (212)
T ss_pred HcCC----CCcCEEEEEC--CcccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcc---cCCC
Confidence 4556 8999999998 456888888888765 48999986543 23 3334554333 222211 1111
Q ss_pred cCCCccEEEEcCCCCcccccccccccccCCCceEEEe
Q psy9949 250 GAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTL 286 (383)
Q Consensus 250 ~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~ 286 (383)
..+.||+|+-......... .+.+.|+ ++|+++..
T Consensus 142 ~~~~fD~I~~~~~~~~~~~-~l~~~Lk--pgG~lvi~ 175 (212)
T PRK13942 142 ENAPYDRIYVTAAGPDIPK-PLIEQLK--DGGIMVIP 175 (212)
T ss_pred cCCCcCEEEECCCcccchH-HHHHhhC--CCcEEEEE
Confidence 2357999886554444333 2478889 99999875
No 345
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=94.26 E-value=0.24 Score=44.43 Aligned_cols=76 Identities=25% Similarity=0.323 Sum_probs=47.8
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecCc---h-HHHHHh----cCCCee--eeCCChHHH----HHHhc-
Q psy9949 188 RDKRVLVLGAS--GGVGTMAVQLLKAWDIEVVTTCSGD---A-KDLVTS----LNPNLV--IDYNEPEAM----HSIAG- 250 (383)
Q Consensus 188 ~~~~VlI~ga~--g~vG~~ai~la~~~G~~Vi~~~~~~---~-~~~~~~----lg~~~v--~~~~~~~~~----~~i~~- 250 (383)
.+++++|+||+ +++|.+++..+...|++|+.+.++. + .+.+++ .+.... .|..+.+-. +.+.+
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 57899999975 7999999998888999998876321 1 222222 121112 344443322 22222
Q ss_pred CCCccEEEEcCCC
Q psy9949 251 AGPYDVILDAAGI 263 (383)
Q Consensus 251 ~~g~d~v~d~~g~ 263 (383)
.+.+|++|+++|.
T Consensus 85 ~g~iD~lv~nag~ 97 (258)
T PRK07370 85 WGKLDILVHCLAF 97 (258)
T ss_pred cCCCCEEEEcccc
Confidence 3679999999984
No 346
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=94.26 E-value=0.12 Score=46.93 Aligned_cols=73 Identities=25% Similarity=0.342 Sum_probs=43.6
Q ss_pred EEEEcCCchHHHHHHHHHHHCCC-EEEEEecCchH--HHHHhc----CCCe--------eeeCCChHHHHHHhcCCCccE
Q psy9949 192 VLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGDAK--DLVTSL----NPNL--------VIDYNEPEAMHSIAGAGPYDV 256 (383)
Q Consensus 192 VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~~~--~~~~~l----g~~~--------v~~~~~~~~~~~i~~~~g~d~ 256 (383)
|||+||+|.+|..+++.+...+. +++.+++++.. ++-+++ .... +-|..+.....++.+..++|+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 79999999999988888887786 88988877642 233333 2211 125555555566666669999
Q ss_pred EEEcCCCC
Q psy9949 257 ILDAAGIP 264 (383)
Q Consensus 257 v~d~~g~~ 264 (383)
||.++.-.
T Consensus 81 VfHaAA~K 88 (293)
T PF02719_consen 81 VFHAAALK 88 (293)
T ss_dssp EEE-----
T ss_pred EEEChhcC
Confidence 99998865
No 347
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=94.21 E-value=0.26 Score=44.75 Aligned_cols=72 Identities=18% Similarity=0.257 Sum_probs=47.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc-hH-HHHHhcCCCe----eeeCCChHHHHHHhcCCCccEEEE
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD-AK-DLVTSLNPNL----VIDYNEPEAMHSIAGAGPYDVILD 259 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~-~~-~~~~~lg~~~----v~~~~~~~~~~~i~~~~g~d~v~d 259 (383)
.++++++|.| +||.+.+++..++..|+ +++++.|+. +. ++++.++... .....+ .. ....+|++|+
T Consensus 124 ~~~~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~--~~----~~~~~dliIN 196 (283)
T COG0169 124 VTGKRVLILG-AGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALAD--LE----GLEEADLLIN 196 (283)
T ss_pred cCCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccccccccccc--cc----cccccCEEEE
Confidence 4679999999 89999999999999997 788888764 43 4444444221 111111 00 0014899999
Q ss_pred cCCCCc
Q psy9949 260 AAGIPL 265 (383)
Q Consensus 260 ~~g~~~ 265 (383)
+++...
T Consensus 197 aTp~Gm 202 (283)
T COG0169 197 ATPVGM 202 (283)
T ss_pred CCCCCC
Confidence 987543
No 348
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=94.20 E-value=0.2 Score=47.71 Aligned_cols=75 Identities=15% Similarity=0.162 Sum_probs=47.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHH-HhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLV-TSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGI 263 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~-~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~ 263 (383)
..+.+|+|+||+|-+|..++..+...|.+|+++++....... ..++...+ .|..+......+ ..++|+||.+++.
T Consensus 19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~--~~~~D~Vih~Aa~ 95 (370)
T PLN02695 19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKV--TKGVDHVFNLAAD 95 (370)
T ss_pred CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccceEEECCCCCHHHHHHH--HhCCCEEEEcccc
Confidence 356799999999999999999999999999999864321110 11121111 233322211111 2478999999853
No 349
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=94.19 E-value=0.23 Score=42.59 Aligned_cols=93 Identities=18% Similarity=0.171 Sum_probs=57.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecCc-hHHH----HHhcC-CCeeeeCCChHHHHHHhcC-CCccEE
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWD--IEVVTTCSGD-AKDL----VTSLN-PNLVIDYNEPEAMHSIAGA-GPYDVI 257 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G--~~Vi~~~~~~-~~~~----~~~lg-~~~v~~~~~~~~~~~i~~~-~g~d~v 257 (383)
.++++|+-.| +|. |.+++.+++..+ .+|++++.++ ..+. ++.++ .+++.... .+..+.+... ..+|.|
T Consensus 39 ~~~~~vlDlG-~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~-~d~~~~l~~~~~~~D~V 115 (198)
T PRK00377 39 RKGDMILDIG-CGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK-GEAPEILFTINEKFDRI 115 (198)
T ss_pred CCcCEEEEeC-CcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE-echhhhHhhcCCCCCEE
Confidence 8899999999 666 999999998764 4899999553 3343 34566 33332111 1122222222 479999
Q ss_pred EEcCCCCcc---cccccccccccCCCceEEE
Q psy9949 258 LDAAGIPLD---QINSYLPFLKTGKFSKFVT 285 (383)
Q Consensus 258 ~d~~g~~~~---~~~~~~~~l~~~~~G~~v~ 285 (383)
|...+.... ... ..++++ ++|+++.
T Consensus 116 ~~~~~~~~~~~~l~~-~~~~Lk--pgG~lv~ 143 (198)
T PRK00377 116 FIGGGSEKLKEIISA-SWEIIK--KGGRIVI 143 (198)
T ss_pred EECCCcccHHHHHHH-HHHHcC--CCcEEEE
Confidence 986553221 222 256788 9999875
No 350
>PRK06101 short chain dehydrogenase; Provisional
Probab=94.18 E-value=0.3 Score=43.15 Aligned_cols=74 Identities=15% Similarity=0.150 Sum_probs=46.5
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHHHhcC-CCee--eeCCChHHHHHH-hcC-CCccEEEEcCCC
Q psy9949 190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLVTSLN-PNLV--IDYNEPEAMHSI-AGA-GPYDVILDAAGI 263 (383)
Q Consensus 190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~~~lg-~~~v--~~~~~~~~~~~i-~~~-~g~d~v~d~~g~ 263 (383)
.+++|+||+|++|..++..+...|++|++++++++ .+.+.+.+ .... .|..+.+-.+++ ... ...|.++.++|.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag~ 81 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAGD 81 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCcc
Confidence 47999999999999988888888999999987643 33332222 1111 354443333332 222 246777777763
No 351
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=94.17 E-value=0.2 Score=47.82 Aligned_cols=108 Identities=18% Similarity=0.205 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHH
Q psy9949 168 TGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMH 246 (383)
Q Consensus 168 ~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~ 246 (383)
+....+..+.+...+ +++++||-.| + |.|..++.+++..|++|++++.+ +..+.+++.....-+.....++.
T Consensus 151 Aq~~k~~~l~~~l~l----~~g~rVLDIG-c-G~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D~~- 223 (383)
T PRK11705 151 AQEAKLDLICRKLQL----KPGMRVLDIG-C-GWGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLPVEIRLQDYR- 223 (383)
T ss_pred HHHHHHHHHHHHhCC----CCCCEEEEeC-C-CccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCeEEEEECchh-
Confidence 334455555556667 8999999998 4 67888899999889999999944 45565554321100111111111
Q ss_pred HHhcCCCccEEEEc-----CCCCc--ccccccccccccCCCceEEEe
Q psy9949 247 SIAGAGPYDVILDA-----AGIPL--DQINSYLPFLKTGKFSKFVTL 286 (383)
Q Consensus 247 ~i~~~~g~d~v~d~-----~g~~~--~~~~~~~~~l~~~~~G~~v~~ 286 (383)
.+ .+.+|.|+.. +|... .....+.++|+ |+|.++..
T Consensus 224 ~l--~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~Lk--pGG~lvl~ 266 (383)
T PRK11705 224 DL--NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLK--PDGLFLLH 266 (383)
T ss_pred hc--CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcC--CCcEEEEE
Confidence 11 2468988753 23221 11111256889 99999874
No 352
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=94.13 E-value=0.9 Score=39.93 Aligned_cols=91 Identities=16% Similarity=0.246 Sum_probs=56.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCE---EEEEecC-----ch--------HHHHHhcCCCeeeeCCChHHHHHHhcC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIE---VVTTCSG-----DA--------KDLVTSLNPNLVIDYNEPEAMHSIAGA 251 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~---Vi~~~~~-----~~--------~~~~~~lg~~~v~~~~~~~~~~~i~~~ 251 (383)
++.+++|.| +|+.|..++..+...|++ ++.++++ ++ .++++.++... .+ .++.+.+
T Consensus 24 ~~~rvlvlG-AGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~---~~l~~~l--- 95 (226)
T cd05311 24 EEVKIVING-AGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG---GTLKEAL--- 95 (226)
T ss_pred cCCEEEEEC-chHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc---CCHHHHH---
Confidence 568999999 899999999888888975 7777765 22 22344443211 11 1233333
Q ss_pred CCccEEEEcCCCCcccccccccccccCCCceEEEecCC
Q psy9949 252 GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSP 289 (383)
Q Consensus 252 ~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~ 289 (383)
.++|++|.+++...... ..++.+. +...+..+.+|
T Consensus 96 ~~~dvlIgaT~~G~~~~-~~l~~m~--~~~ivf~lsnP 130 (226)
T cd05311 96 KGADVFIGVSRPGVVKK-EMIKKMA--KDPIVFALANP 130 (226)
T ss_pred hcCCEEEeCCCCCCCCH-HHHHhhC--CCCEEEEeCCC
Confidence 35899999997332221 1256666 66555555444
No 353
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.12 E-value=0.38 Score=42.66 Aligned_cols=76 Identities=21% Similarity=0.299 Sum_probs=48.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-c-hH-HHHHhcCCC-ee--eeCCChHH-H---HHHhc-CCC-cc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-D-AK-DLVTSLNPN-LV--IDYNEPEA-M---HSIAG-AGP-YD 255 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~-~~-~~~~~lg~~-~v--~~~~~~~~-~---~~i~~-~~g-~d 255 (383)
.+++++|+||+|++|..++..+...|++|+.+++. . +. +...+++.. .+ .|..+.+- . +.+.+ .++ +|
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id 83 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT 83 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence 45789999999999999999888889999887643 2 22 233334322 11 24433222 2 22221 244 99
Q ss_pred EEEEcCCC
Q psy9949 256 VILDAAGI 263 (383)
Q Consensus 256 ~v~d~~g~ 263 (383)
++|.++|.
T Consensus 84 ~li~~ag~ 91 (253)
T PRK08642 84 TVVNNALA 91 (253)
T ss_pred EEEECCCc
Confidence 99999864
No 354
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=94.09 E-value=0.27 Score=50.71 Aligned_cols=76 Identities=22% Similarity=0.369 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHh----cCCCe--e--eeCCChHHHHHH-----hcCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTS----LNPNL--V--IDYNEPEAMHSI-----AGAG 252 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~----lg~~~--v--~~~~~~~~~~~i-----~~~~ 252 (383)
.++++||+||+|++|..+++.+...|++|++++++. +.+ ...+ .+... . .|..+.+-...+ ...+
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g 492 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG 492 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 478999999999999999998888999999998653 222 1122 23211 1 344443322222 1236
Q ss_pred CccEEEEcCCC
Q psy9949 253 PYDVILDAAGI 263 (383)
Q Consensus 253 g~d~v~d~~g~ 263 (383)
++|++|.++|.
T Consensus 493 ~iDilV~nAG~ 503 (676)
T TIGR02632 493 GVDIVVNNAGI 503 (676)
T ss_pred CCcEEEECCCC
Confidence 89999999985
No 355
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.08 E-value=0.4 Score=42.53 Aligned_cols=76 Identities=22% Similarity=0.316 Sum_probs=48.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc--hH-H---HHHhcCCC-ee--eeCCChHHH----HHHhc-CCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD--AK-D---LVTSLNPN-LV--IDYNEPEAM----HSIAG-AGP 253 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~--~~-~---~~~~lg~~-~v--~~~~~~~~~----~~i~~-~~g 253 (383)
.+.++||+||+|++|..+++-+...|++|+...++. +. + ..++.+.. .. .|..+..-. +++.+ .++
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGV 84 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence 467999999999999999988888999988777432 21 1 22233332 12 344443322 22222 357
Q ss_pred ccEEEEcCCC
Q psy9949 254 YDVILDAAGI 263 (383)
Q Consensus 254 ~d~v~d~~g~ 263 (383)
+|++|.++|.
T Consensus 85 ~d~vi~~ag~ 94 (252)
T PRK06077 85 ADILVNNAGL 94 (252)
T ss_pred CCEEEECCCC
Confidence 9999999984
No 356
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=94.06 E-value=0.17 Score=49.82 Aligned_cols=75 Identities=19% Similarity=0.354 Sum_probs=52.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc----------------------hHHHHHhcCCCeeeeCCC-hH-
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD----------------------AKDLVTSLNPNLVIDYNE-PE- 243 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~----------------------~~~~~~~lg~~~v~~~~~-~~- 243 (383)
.+++|+|.| +|..|+.++..++..|.+|+.....+ ..+.++++|.+..++... .+
T Consensus 140 ~~~~V~IIG-~GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 218 (467)
T TIGR01318 140 TGKRVAVIG-AGPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGRDI 218 (467)
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCCcc
Confidence 578999999 89999999999999999988876432 234566788764443321 11
Q ss_pred HHHHHhcCCCccEEEEcCCCCc
Q psy9949 244 AMHSIAGAGPYDVILDAAGIPL 265 (383)
Q Consensus 244 ~~~~i~~~~g~d~v~d~~g~~~ 265 (383)
..+.+. .++|.||.++|...
T Consensus 219 ~~~~~~--~~~D~vilAtGa~~ 238 (467)
T TIGR01318 219 SLDDLL--EDYDAVFLGVGTYR 238 (467)
T ss_pred CHHHHH--hcCCEEEEEeCCCC
Confidence 111111 36999999999865
No 357
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.06 E-value=0.39 Score=43.53 Aligned_cols=76 Identities=18% Similarity=0.144 Sum_probs=56.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD 266 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~ 266 (383)
-.|++|+|.|.+.-+|.-++.++...|++|+...+. ..++.+.+ ...|+|+-++|.+..
T Consensus 156 l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~------------------t~~l~~~~---~~ADIVV~avG~~~~ 214 (285)
T PRK14189 156 LRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSK------------------TRDLAAHT---RQADIVVAAVGKRNV 214 (285)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCC------------------CCCHHHHh---hhCCEEEEcCCCcCc
Confidence 378999999987888999999999999999875332 11222222 358999999998765
Q ss_pred cccccccccccCCCceEEEecC
Q psy9949 267 QINSYLPFLKTGKFSKFVTLRS 288 (383)
Q Consensus 267 ~~~~~~~~l~~~~~G~~v~~~~ 288 (383)
.. -+.++ ++..++++|-
T Consensus 215 i~---~~~ik--~gavVIDVGi 231 (285)
T PRK14189 215 LT---ADMVK--PGATVIDVGM 231 (285)
T ss_pred cC---HHHcC--CCCEEEEccc
Confidence 22 46788 8888888864
No 358
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=94.05 E-value=0.31 Score=43.27 Aligned_cols=74 Identities=27% Similarity=0.390 Sum_probs=48.2
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHH-H---hcCCC-ee--eeCCChH-HHH---HHh-cCCCccE
Q psy9949 190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLV-T---SLNPN-LV--IDYNEPE-AMH---SIA-GAGPYDV 256 (383)
Q Consensus 190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~-~---~lg~~-~v--~~~~~~~-~~~---~i~-~~~g~d~ 256 (383)
+++||+|++|++|..++..+...|++|++++++.. .+.+ . ..+.. .. .|..+.. +.. .+. ..+++|+
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 81 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI 81 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 57999999999999999888888999999997542 2222 2 22322 11 2444432 211 222 2357999
Q ss_pred EEEcCCC
Q psy9949 257 ILDAAGI 263 (383)
Q Consensus 257 v~d~~g~ 263 (383)
+|.+++.
T Consensus 82 vi~~a~~ 88 (255)
T TIGR01963 82 LVNNAGI 88 (255)
T ss_pred EEECCCC
Confidence 9998875
No 359
>PRK07102 short chain dehydrogenase; Provisional
Probab=94.05 E-value=0.34 Score=42.81 Aligned_cols=74 Identities=15% Similarity=0.212 Sum_probs=46.9
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHh---cCCCe--e--eeCCChHHHHHH-hcC-CCccEEE
Q psy9949 190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTS---LNPNL--V--IDYNEPEAMHSI-AGA-GPYDVIL 258 (383)
Q Consensus 190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~---lg~~~--v--~~~~~~~~~~~i-~~~-~g~d~v~ 258 (383)
++++|+||+|++|..+++.+...|++|+++++++. . +...+ .+... + .|..+..-.+++ .+. ..+|+++
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv 81 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIVL 81 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEE
Confidence 47999999999999999988888999999986643 2 22222 12112 2 233333222222 221 3579999
Q ss_pred EcCCC
Q psy9949 259 DAAGI 263 (383)
Q Consensus 259 d~~g~ 263 (383)
.++|.
T Consensus 82 ~~ag~ 86 (243)
T PRK07102 82 IAVGT 86 (243)
T ss_pred ECCcC
Confidence 98875
No 360
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=94.01 E-value=0.27 Score=45.68 Aligned_cols=75 Identities=17% Similarity=0.162 Sum_probs=47.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-H---HHhcCC---Ceee--eCCChHHHHHHhcCCCccE
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-L---VTSLNP---NLVI--DYNEPEAMHSIAGAGPYDV 256 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~---~~~lg~---~~v~--~~~~~~~~~~i~~~~g~d~ 256 (383)
..++++||+||+|.+|..++..+...|++|++++++. +.. . ....+. ..++ |..+.+..+.+. .++|+
T Consensus 3 ~~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--~~~d~ 80 (325)
T PLN02989 3 DGGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAI--DGCET 80 (325)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHH--cCCCE
Confidence 4578999999999999999999988999998887443 221 1 111111 1122 333332222222 36899
Q ss_pred EEEcCCC
Q psy9949 257 ILDAAGI 263 (383)
Q Consensus 257 v~d~~g~ 263 (383)
||.++|.
T Consensus 81 vih~A~~ 87 (325)
T PLN02989 81 VFHTASP 87 (325)
T ss_pred EEEeCCC
Confidence 9999884
No 361
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=94.01 E-value=0.26 Score=43.39 Aligned_cols=74 Identities=30% Similarity=0.465 Sum_probs=47.2
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-Cch-H-HHHHh---cCCC-ee--eeCCChHHHH----HHhc-CCCcc
Q psy9949 190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS-GDA-K-DLVTS---LNPN-LV--IDYNEPEAMH----SIAG-AGPYD 255 (383)
Q Consensus 190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~-~~~-~-~~~~~---lg~~-~v--~~~~~~~~~~----~i~~-~~g~d 255 (383)
++++|+|++|++|..++..+...|++|+++.+ +.. . +...+ .+.. .. .|..+....+ .+.+ .+.+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 47899999999999999999999999998886 322 1 12222 2211 11 3444432222 2222 35799
Q ss_pred EEEEcCCC
Q psy9949 256 VILDAAGI 263 (383)
Q Consensus 256 ~v~d~~g~ 263 (383)
++|.++|.
T Consensus 81 ~vi~~ag~ 88 (242)
T TIGR01829 81 VLVNNAGI 88 (242)
T ss_pred EEEECCCC
Confidence 99999985
No 362
>PLN02240 UDP-glucose 4-epimerase
Probab=93.93 E-value=0.34 Score=45.48 Aligned_cols=76 Identities=24% Similarity=0.343 Sum_probs=48.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-----HHHHHh----cC--CCee-eeCCChHHHHHHhcCCCcc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-----KDLVTS----LN--PNLV-IDYNEPEAMHSIAGAGPYD 255 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-----~~~~~~----lg--~~~v-~~~~~~~~~~~i~~~~g~d 255 (383)
.+++|+|+||+|.+|..+++.+...|.+|+++++..+ ...... .+ +..+ .|..+......+.+..++|
T Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d 83 (352)
T PLN02240 4 MGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFD 83 (352)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCCC
Confidence 4678999999999999999988888999999874321 111111 11 2211 3444443333333334799
Q ss_pred EEEEcCCC
Q psy9949 256 VILDAAGI 263 (383)
Q Consensus 256 ~v~d~~g~ 263 (383)
+||++++.
T Consensus 84 ~vih~a~~ 91 (352)
T PLN02240 84 AVIHFAGL 91 (352)
T ss_pred EEEEcccc
Confidence 99999874
No 363
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=93.89 E-value=0.17 Score=47.94 Aligned_cols=91 Identities=22% Similarity=0.294 Sum_probs=57.9
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecC-chHHHHHhcC---CC-eeeeCCCh-HHHHHHhcCCCccEEEEcCC
Q psy9949 190 KRVLVLGASGGVGTMAVQLLKAWD-IEVVTTCSG-DAKDLVTSLN---PN-LVIDYNEP-EAMHSIAGAGPYDVILDAAG 262 (383)
Q Consensus 190 ~~VlI~ga~g~vG~~ai~la~~~G-~~Vi~~~~~-~~~~~~~~lg---~~-~v~~~~~~-~~~~~i~~~~g~d~v~d~~g 262 (383)
.+|||.| +|++|+.+++.+...| .+|++.+++ ++.+.+.... .. ..+|..+. .+.+-| .++|+||++.+
T Consensus 2 ~~ilviG-aG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li---~~~d~VIn~~p 77 (389)
T COG1748 2 MKILVIG-AGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALI---KDFDLVINAAP 77 (389)
T ss_pred CcEEEEC-CchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHH---hcCCEEEEeCC
Confidence 4699999 6999999999988888 699999977 4555443332 21 23555543 233333 35699999998
Q ss_pred CCcccccccccccccCCCceEEEec
Q psy9949 263 IPLDQINSYLPFLKTGKFSKFVTLR 287 (383)
Q Consensus 263 ~~~~~~~~~~~~l~~~~~G~~v~~~ 287 (383)
....... +-.|++ .+=.++++.
T Consensus 78 ~~~~~~i-~ka~i~--~gv~yvDts 99 (389)
T COG1748 78 PFVDLTI-LKACIK--TGVDYVDTS 99 (389)
T ss_pred chhhHHH-HHHHHH--hCCCEEEcc
Confidence 7654433 124444 444555553
No 364
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=93.89 E-value=0.18 Score=46.48 Aligned_cols=72 Identities=14% Similarity=0.238 Sum_probs=46.7
Q ss_pred EEEEcCCchHHHHHHHHHHHCCC-EEEEEecCchHHHHHhcCCCee-eeCCChHHHHHHhc--CCCccEEEEcCCC
Q psy9949 192 VLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGDAKDLVTSLNPNLV-IDYNEPEAMHSIAG--AGPYDVILDAAGI 263 (383)
Q Consensus 192 VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~i~~--~~g~d~v~d~~g~ 263 (383)
|||+||+|-+|..++..+...|. .|+++.+..+......++...+ -+.++.+..+.+.+ ..++|+|+.+++.
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~ 76 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHKFLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGAC 76 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCchhhhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECccc
Confidence 68999999999999999999998 7887765433222222222112 23333444444443 2589999999874
No 365
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=93.87 E-value=0.61 Score=42.68 Aligned_cols=35 Identities=23% Similarity=0.270 Sum_probs=29.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD 223 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~ 223 (383)
++++++|+| +|++|.+++..+...|+ +|+++.++.
T Consensus 125 ~~k~vlI~G-AGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 125 KGKKLTVIG-AGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 578999999 58999999888888999 588888763
No 366
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=93.87 E-value=0.29 Score=45.44 Aligned_cols=37 Identities=32% Similarity=0.250 Sum_probs=32.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD 223 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~ 223 (383)
..+++|+|+||+|.+|..++..+...|.+|++++++.
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~ 39 (322)
T PLN02986 3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDL 39 (322)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCC
Confidence 3578999999999999999998888899999888653
No 367
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=93.86 E-value=0.32 Score=42.89 Aligned_cols=75 Identities=28% Similarity=0.427 Sum_probs=48.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch---HHHHHhcC---CC-ee--eeCCChHHHH----HHh-cCCCcc
Q psy9949 190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA---KDLVTSLN---PN-LV--IDYNEPEAMH----SIA-GAGPYD 255 (383)
Q Consensus 190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~---~~~~~~lg---~~-~v--~~~~~~~~~~----~i~-~~~g~d 255 (383)
++++|+|++|++|..+++.+...|++|+.++++.. .+...... .. .+ .|..+.+-.+ .+. ..+.+|
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id 82 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD 82 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 47999999999999999888888999999986632 12222221 11 12 2444433222 222 235799
Q ss_pred EEEEcCCCC
Q psy9949 256 VILDAAGIP 264 (383)
Q Consensus 256 ~v~d~~g~~ 264 (383)
++|.++|..
T Consensus 83 ~vi~~ag~~ 91 (245)
T PRK12824 83 ILVNNAGIT 91 (245)
T ss_pred EEEECCCCC
Confidence 999999853
No 368
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=93.86 E-value=0.4 Score=43.64 Aligned_cols=90 Identities=18% Similarity=0.304 Sum_probs=56.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc-hH-HHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD-AK-DLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIP 264 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~-~~-~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~ 264 (383)
.+++++|+| +|++|.+++..+...|+ +|+++.++. +. +++..++....+... .+.. .....+|+||+|+...
T Consensus 122 ~~k~vlVlG-aGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~-~~~~---~~~~~~DivInaTp~g 196 (278)
T PRK00258 122 KGKRILILG-AGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELD-LELQ---EELADFDLIINATSAG 196 (278)
T ss_pred CCCEEEEEc-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeec-ccch---hccccCCEEEECCcCC
Confidence 567899999 79999999999999995 888888764 33 344444421101110 0111 1124699999998765
Q ss_pred ccc------ccccccccccCCCceEEEe
Q psy9949 265 LDQ------INSYLPFLKTGKFSKFVTL 286 (383)
Q Consensus 265 ~~~------~~~~~~~l~~~~~G~~v~~ 286 (383)
... .. ..++. +...++++
T Consensus 197 ~~~~~~~~~~~--~~~l~--~~~~v~Di 220 (278)
T PRK00258 197 MSGELPLPPLP--LSLLR--PGTIVYDM 220 (278)
T ss_pred CCCCCCCCCCC--HHHcC--CCCEEEEe
Confidence 321 11 34566 66666665
No 369
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=93.84 E-value=0.28 Score=42.39 Aligned_cols=92 Identities=18% Similarity=0.119 Sum_probs=57.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecCch-HHH----HHhcCCC---eeeeCCChHHHHHHhcCCCccE
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWD--IEVVTTCSGDA-KDL----VTSLNPN---LVIDYNEPEAMHSIAGAGPYDV 256 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G--~~Vi~~~~~~~-~~~----~~~lg~~---~v~~~~~~~~~~~i~~~~g~d~ 256 (383)
+++++||-.| .|.|..++.+++..+ .+|++++.+++ .+. +...+.. .++..+. .+.+.....||.
T Consensus 71 ~~~~~VLDiG--~GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~---~~~~~~~~~fD~ 145 (205)
T PRK13944 71 RPGMKILEVG--TGSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDG---KRGLEKHAPFDA 145 (205)
T ss_pred CCCCEEEEEC--cCccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCc---ccCCccCCCccE
Confidence 7889999998 456888888888764 58999996543 232 3344432 2232221 111112357999
Q ss_pred EEEcCCCCcccccccccccccCCCceEEEe
Q psy9949 257 ILDAAGIPLDQINSYLPFLKTGKFSKFVTL 286 (383)
Q Consensus 257 v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~ 286 (383)
|+-+......... +.+.++ ++|+++..
T Consensus 146 Ii~~~~~~~~~~~-l~~~L~--~gG~lvi~ 172 (205)
T PRK13944 146 IIVTAAASTIPSA-LVRQLK--DGGVLVIP 172 (205)
T ss_pred EEEccCcchhhHH-HHHhcC--cCcEEEEE
Confidence 9877654444333 378899 99999764
No 370
>PRK05599 hypothetical protein; Provisional
Probab=93.83 E-value=0.36 Score=42.90 Aligned_cols=72 Identities=22% Similarity=0.312 Sum_probs=45.9
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-H---HHhcCCC--ee--eeCCChH----HHHHHhc-CCCccE
Q psy9949 191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-L---VTSLNPN--LV--IDYNEPE----AMHSIAG-AGPYDV 256 (383)
Q Consensus 191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~---~~~lg~~--~v--~~~~~~~----~~~~i~~-~~g~d~ 256 (383)
+++|+||++++|.+++..+. .|++|+.+.+++ +.+ . +++.+.+ .. .|..+.+ +.+++.+ .+++|+
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 80 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISL 80 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCE
Confidence 68999999999998877665 589999988654 322 2 2233432 12 2444432 2233333 357999
Q ss_pred EEEcCCC
Q psy9949 257 ILDAAGI 263 (383)
Q Consensus 257 v~d~~g~ 263 (383)
++.++|.
T Consensus 81 lv~nag~ 87 (246)
T PRK05599 81 AVVAFGI 87 (246)
T ss_pred EEEecCc
Confidence 9998885
No 371
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=93.82 E-value=0.48 Score=43.70 Aligned_cols=31 Identities=29% Similarity=0.453 Sum_probs=29.0
Q ss_pred CCCEEEEEcC--CchHHHHHHHHHHHCCCEEEE
Q psy9949 188 RDKRVLVLGA--SGGVGTMAVQLLKAWDIEVVT 218 (383)
Q Consensus 188 ~~~~VlI~ga--~g~vG~~ai~la~~~G~~Vi~ 218 (383)
.|+++||+|+ ++++|.++++.+...|++|+.
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~ 40 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV 40 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE
Confidence 6889999998 699999999999999999988
No 372
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=93.82 E-value=0.48 Score=41.31 Aligned_cols=34 Identities=24% Similarity=0.158 Sum_probs=30.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG 222 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~ 222 (383)
.+.+|+|.| .|.+|..+++++...|++++++++.
T Consensus 22 ~g~~vaIqG-fGnVG~~~a~~L~~~G~~vV~vsD~ 55 (217)
T cd05211 22 EGLTVAVQG-LGNVGWGLAKKLAEEGGKVLAVSDP 55 (217)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEEcC
Confidence 678999999 9999999999999999988887743
No 373
>PRK07578 short chain dehydrogenase; Provisional
Probab=93.79 E-value=0.38 Score=41.09 Aligned_cols=63 Identities=30% Similarity=0.497 Sum_probs=43.2
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChH-HHHHHhcCCCccEEEEcCCC
Q psy9949 191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPE-AMHSIAGAGPYDVILDAAGI 263 (383)
Q Consensus 191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~i~~~~g~d~v~d~~g~ 263 (383)
+++|+|++|++|..++..+... ++|+++.++.. ....|..+.+ ..+.+...+++|++|.++|.
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~---------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~ 65 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG---------DVQVDITDPASIRALFEKVGKVDAVVSAAGK 65 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC---------ceEecCCChHHHHHHHHhcCCCCEEEECCCC
Confidence 6899999999999887777666 89998886532 1123444433 22333334679999999885
No 374
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=93.79 E-value=0.098 Score=47.84 Aligned_cols=60 Identities=33% Similarity=0.493 Sum_probs=37.9
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949 191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGI 263 (383)
Q Consensus 191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~ 263 (383)
+|||+|++|.+|.++...++..|.+|+++.+. -+|..+.+....+.+...+|+||+|++.
T Consensus 2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~ 61 (286)
T PF04321_consen 2 RILITGASGFLGSALARALKERGYEVIATSRS-------------DLDLTDPEAVAKLLEAFKPDVVINCAAY 61 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-------------CS-TTSHHHHHHHHHHH--SEEEE----
T ss_pred EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-------------hcCCCCHHHHHHHHHHhCCCeEecccee
Confidence 69999999999999999999988899998654 1222332222233233358888888865
No 375
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=93.79 E-value=0.27 Score=44.85 Aligned_cols=74 Identities=16% Similarity=0.153 Sum_probs=47.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc-hH-HHHHhcCCC-eeeeCCChHHHHHHh-cCCCccEEEEcCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD-AK-DLVTSLNPN-LVIDYNEPEAMHSIA-GAGPYDVILDAAG 262 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~-~~-~~~~~lg~~-~v~~~~~~~~~~~i~-~~~g~d~v~d~~g 262 (383)
++++++|.| +|+.+.+++..+..+|+ +|+++.|+. +. +++..++.. .+..... .+.+. ....+|+||+|++
T Consensus 124 ~~k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~---~~~~~~~~~~~DiVInaTp 199 (282)
T TIGR01809 124 AGFRGLVIG-AGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEG---DSGGLAIEKAAEVLVSTVP 199 (282)
T ss_pred CCceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccc---hhhhhhcccCCCEEEECCC
Confidence 578899999 89999999999999998 788887764 32 455555421 1111111 01111 1246899999987
Q ss_pred CCc
Q psy9949 263 IPL 265 (383)
Q Consensus 263 ~~~ 265 (383)
...
T Consensus 200 ~g~ 202 (282)
T TIGR01809 200 ADV 202 (282)
T ss_pred CCC
Confidence 643
No 376
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=93.78 E-value=0.4 Score=45.16 Aligned_cols=75 Identities=21% Similarity=0.251 Sum_probs=48.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhc--CCC-eee--eCCChHHHHHHhcCCCccEEEE
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSL--NPN-LVI--DYNEPEAMHSIAGAGPYDVILD 259 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~l--g~~-~v~--~~~~~~~~~~i~~~~g~d~v~d 259 (383)
..+.+|||+||+|.+|..+++.+...|.+|++++++.. . .+...+ +.. .++ |..+......+. .++|+||.
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--~~~d~Vih 85 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAV--KGCDGVFH 85 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHH--cCCCEEEE
Confidence 56779999999999999999999889999999886532 2 222222 111 122 333322222221 36899999
Q ss_pred cCCC
Q psy9949 260 AAGI 263 (383)
Q Consensus 260 ~~g~ 263 (383)
+++.
T Consensus 86 ~A~~ 89 (353)
T PLN02896 86 VAAS 89 (353)
T ss_pred CCcc
Confidence 8874
No 377
>PRK05855 short chain dehydrogenase; Validated
Probab=93.76 E-value=0.35 Score=48.72 Aligned_cols=77 Identities=25% Similarity=0.371 Sum_probs=51.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HH---HhcCCC-ee--eeCCChHHHHHH----hc-CCCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LV---TSLNPN-LV--IDYNEPEAMHSI----AG-AGPY 254 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~---~~lg~~-~v--~~~~~~~~~~~i----~~-~~g~ 254 (383)
.+.+++|+||+|++|..+++.+...|++|+.++++.. .+ .. ++.|.. .+ .|..+..-.+++ .+ .+.+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 393 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP 393 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 4578999999999999999888889999999886642 22 22 233432 11 344443322222 22 3579
Q ss_pred cEEEEcCCCC
Q psy9949 255 DVILDAAGIP 264 (383)
Q Consensus 255 d~v~d~~g~~ 264 (383)
|++|+++|..
T Consensus 394 d~lv~~Ag~~ 403 (582)
T PRK05855 394 DIVVNNAGIG 403 (582)
T ss_pred cEEEECCccC
Confidence 9999999863
No 378
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=93.74 E-value=0.57 Score=42.80 Aligned_cols=75 Identities=17% Similarity=0.261 Sum_probs=44.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc----h-HHHHHhcCCC--eeeeCCChHHHHHHh-cCCCccEEE
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD----A-KDLVTSLNPN--LVIDYNEPEAMHSIA-GAGPYDVIL 258 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~----~-~~~~~~lg~~--~v~~~~~~~~~~~i~-~~~g~d~v~ 258 (383)
.+++++|.| +|+.+.+++..+...|+ +++++.++. + ++++++++.. ..+.....+-.+.+. ....+|+|+
T Consensus 123 ~~k~vlvlG-aGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDivI 201 (288)
T PRK12749 123 KGKTMVLLG-AGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILT 201 (288)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEEE
Confidence 567999999 78889887777777898 788888763 2 2344444321 001111110011121 124689999
Q ss_pred EcCCC
Q psy9949 259 DAAGI 263 (383)
Q Consensus 259 d~~g~ 263 (383)
+|+.-
T Consensus 202 NaTp~ 206 (288)
T PRK12749 202 NGTKV 206 (288)
T ss_pred ECCCC
Confidence 98854
No 379
>PRK12746 short chain dehydrogenase; Provisional
Probab=93.73 E-value=0.53 Score=41.86 Aligned_cols=35 Identities=29% Similarity=0.248 Sum_probs=29.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SG 222 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~ 222 (383)
.+.+++|+|++|++|..+++.+...|++|++.. ++
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~ 40 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRN 40 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC
Confidence 457999999999999999998888899887754 44
No 380
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=93.72 E-value=0.52 Score=43.03 Aligned_cols=69 Identities=19% Similarity=0.232 Sum_probs=45.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc-hH-HHHHhcC----CCeeeeCCChHHHHHHhcCCCccEEEEc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD-AK-DLVTSLN----PNLVIDYNEPEAMHSIAGAGPYDVILDA 260 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~-~~-~~~~~lg----~~~v~~~~~~~~~~~i~~~~g~d~v~d~ 260 (383)
.+++|+|.| +|++|.+++..+...|+ +|+++.++. +. +++++++ ...+.... +..+. ...+|+||+|
T Consensus 126 ~~k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~--~~~~~---~~~aDiVIna 199 (284)
T PRK12549 126 SLERVVQLG-AGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS--DLAAA---LAAADGLVHA 199 (284)
T ss_pred cCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc--chHhh---hCCCCEEEEC
Confidence 567899999 89999999999999998 788887664 32 3444432 11222221 11111 2468999999
Q ss_pred CC
Q psy9949 261 AG 262 (383)
Q Consensus 261 ~g 262 (383)
+.
T Consensus 200 Tp 201 (284)
T PRK12549 200 TP 201 (284)
T ss_pred Cc
Confidence 64
No 381
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=93.71 E-value=0.47 Score=42.15 Aligned_cols=74 Identities=22% Similarity=0.360 Sum_probs=48.4
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHH---HhcCCC-ee--eeCCChHHHHH----Hh-cCCCccE
Q psy9949 190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLV---TSLNPN-LV--IDYNEPEAMHS----IA-GAGPYDV 256 (383)
Q Consensus 190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~---~~lg~~-~v--~~~~~~~~~~~----i~-~~~g~d~ 256 (383)
++++|+|++|++|..+++.+...|++|+.+.++++ . +.. ++.+.. .. .|..+...... +. ..+.+|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 47999999999999999988889999999986542 2 222 233322 11 24444332222 21 2357899
Q ss_pred EEEcCCC
Q psy9949 257 ILDAAGI 263 (383)
Q Consensus 257 v~d~~g~ 263 (383)
+|.++|.
T Consensus 81 vi~~ag~ 87 (254)
T TIGR02415 81 MVNNAGV 87 (254)
T ss_pred EEECCCc
Confidence 9999985
No 382
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=93.70 E-value=0.42 Score=46.95 Aligned_cols=78 Identities=18% Similarity=0.296 Sum_probs=52.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCchH------HHHHhcCCCee----eeCCChHHHHHHhcCCCcc
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGDAK------DLVTSLNPNLV----IDYNEPEAMHSIAGAGPYD 255 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~~~------~~~~~lg~~~v----~~~~~~~~~~~i~~~~g~d 255 (383)
-.|++|+|+||+|++|...+.-....+. +++...++|.. ++-..++.... -|..+.+-.+.+.+..++|
T Consensus 248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd 327 (588)
T COG1086 248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVD 327 (588)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCc
Confidence 3589999999999999866544444466 77777777632 33334442222 3555655566666666799
Q ss_pred EEEEcCCCC
Q psy9949 256 VILDAAGIP 264 (383)
Q Consensus 256 ~v~d~~g~~ 264 (383)
+||.++.-.
T Consensus 328 ~VfHAAA~K 336 (588)
T COG1086 328 IVFHAAALK 336 (588)
T ss_pred eEEEhhhhc
Confidence 999988764
No 383
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=93.60 E-value=0.26 Score=45.57 Aligned_cols=73 Identities=22% Similarity=0.291 Sum_probs=46.4
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch--HHHHHhc----CCCee-eeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949 191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA--KDLVTSL----NPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGI 263 (383)
Q Consensus 191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~--~~~~~~l----g~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~ 263 (383)
+|+|+||+|.+|..+++.+...|.+|+++.+..+ .+.+... +...+ .|..+.+....+.+..++|+|++++|.
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~ 80 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL 80 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence 4899999999999999998888999988764321 1222111 11111 244443333333333579999999975
No 384
>PRK12744 short chain dehydrogenase; Provisional
Probab=93.59 E-value=0.51 Score=42.11 Aligned_cols=76 Identities=18% Similarity=0.310 Sum_probs=48.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-Cc-h---H-HHH---HhcCCC-ee--eeCCChHHHHHH----h-c
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS-GD-A---K-DLV---TSLNPN-LV--IDYNEPEAMHSI----A-G 250 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~-~~-~---~-~~~---~~lg~~-~v--~~~~~~~~~~~i----~-~ 250 (383)
.+++++|+|++|++|..+++.+...|++|+.+++ .+ . . +.. ...+.. .. .|..+..-..++ . .
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence 5679999999999999999999888998777652 21 1 1 122 223332 11 344443222222 1 2
Q ss_pred CCCccEEEEcCCC
Q psy9949 251 AGPYDVILDAAGI 263 (383)
Q Consensus 251 ~~g~d~v~d~~g~ 263 (383)
.+++|++|.++|.
T Consensus 87 ~~~id~li~~ag~ 99 (257)
T PRK12744 87 FGRPDIAINTVGK 99 (257)
T ss_pred hCCCCEEEECCcc
Confidence 3579999999985
No 385
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=93.58 E-value=0.62 Score=42.47 Aligned_cols=72 Identities=15% Similarity=0.248 Sum_probs=44.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc-h-HHHHHhc----CCCeeeeCCChHHHHHHhcCCCccEEEEc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD-A-KDLVTSL----NPNLVIDYNEPEAMHSIAGAGPYDVILDA 260 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~-~-~~~~~~l----g~~~v~~~~~~~~~~~i~~~~g~d~v~d~ 260 (383)
.+++++|.| +||.+.+++..+...|+ +++++.++. + +++++.+ +...+......++... ...+|+|+++
T Consensus 126 ~~k~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~---~~~~divINa 201 (283)
T PRK14027 126 KLDSVVQVG-AGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDV---IAAADGVVNA 201 (283)
T ss_pred CCCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCHhHHHHH---HhhcCEEEEc
Confidence 568999999 89999999888888998 777777664 3 2344443 2211211111111111 1358999999
Q ss_pred CCC
Q psy9949 261 AGI 263 (383)
Q Consensus 261 ~g~ 263 (383)
+..
T Consensus 202 Tp~ 204 (283)
T PRK14027 202 TPM 204 (283)
T ss_pred CCC
Confidence 864
No 386
>PRK12827 short chain dehydrogenase; Provisional
Probab=93.56 E-value=0.53 Score=41.56 Aligned_cols=77 Identities=26% Similarity=0.384 Sum_probs=48.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC----c-hHH-H---HHhcCCC-ee--eeCCChHHHHHHh----c-
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG----D-AKD-L---VTSLNPN-LV--IDYNEPEAMHSIA----G- 250 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~----~-~~~-~---~~~lg~~-~v--~~~~~~~~~~~i~----~- 250 (383)
++.+++|+||+|++|..++..+...|++|+.+++. . ..+ . ....+.. .+ .|..+.+..+.+. +
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE 84 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 45789999999999999998888899998887632 1 111 1 1222322 12 2444433222221 1
Q ss_pred CCCccEEEEcCCCC
Q psy9949 251 AGPYDVILDAAGIP 264 (383)
Q Consensus 251 ~~g~d~v~d~~g~~ 264 (383)
.+++|.+|.++|..
T Consensus 85 ~~~~d~vi~~ag~~ 98 (249)
T PRK12827 85 FGRLDILVNNAGIA 98 (249)
T ss_pred hCCCCEEEECCCCC
Confidence 35799999999853
No 387
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=93.54 E-value=0.55 Score=42.50 Aligned_cols=66 Identities=18% Similarity=0.305 Sum_probs=45.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCch-H-HHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGDA-K-DLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGI 263 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~~-~-~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~ 263 (383)
..+++++|.| +||.+.+++..++..|+ +|+++.++.+ . ++++.++.. +. +.+ ....+|+|++|+..
T Consensus 120 ~~~~~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~----~~-----~~~-~~~~~dlvINaTp~ 188 (272)
T PRK12550 120 PPDLVVALRG-SGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE----WR-----PDL-GGIEADILVNVTPI 188 (272)
T ss_pred CCCCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc----ch-----hhc-ccccCCEEEECCcc
Confidence 4456899999 89999999999999998 6888887643 2 345555421 10 111 12358999999863
No 388
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=93.50 E-value=0.43 Score=44.42 Aligned_cols=74 Identities=15% Similarity=0.258 Sum_probs=46.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecCch-H-HHHHhcCCC--ee--eeCCChHHHHHHhcCCCccEEEE
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWD--IEVVTTCSGDA-K-DLVTSLNPN--LV--IDYNEPEAMHSIAGAGPYDVILD 259 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G--~~Vi~~~~~~~-~-~~~~~lg~~--~v--~~~~~~~~~~~i~~~~g~d~v~d 259 (383)
.+++|||+||+|.+|..+++.+...| .+|++++++.. . +....+... .+ .|..+.....++ ..++|+||.
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~--~~~iD~Vih 80 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRA--LRGVDYVVH 80 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHH--HhcCCEEEE
Confidence 46899999999999999888777665 58888875532 2 222233211 12 244443322222 236999999
Q ss_pred cCCC
Q psy9949 260 AAGI 263 (383)
Q Consensus 260 ~~g~ 263 (383)
++|.
T Consensus 81 ~Ag~ 84 (324)
T TIGR03589 81 AAAL 84 (324)
T ss_pred Cccc
Confidence 9875
No 389
>PLN00198 anthocyanidin reductase; Provisional
Probab=93.41 E-value=0.31 Score=45.57 Aligned_cols=74 Identities=19% Similarity=0.273 Sum_probs=47.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHH---HHhc---CCCeee--eCCChHHHHHHhcCCCccEEE
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDL---VTSL---NPNLVI--DYNEPEAMHSIAGAGPYDVIL 258 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~---~~~l---g~~~v~--~~~~~~~~~~i~~~~g~d~v~ 258 (383)
.+.+|+|+||+|-+|..++..+...|++|++++++. .... ...+ +.-.++ |..+......+ ..++|+||
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~--~~~~d~vi 85 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAP--IAGCDLVF 85 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHH--HhcCCEEE
Confidence 468899999999999999999988999998887543 2211 1111 211222 33333222222 23689999
Q ss_pred EcCCC
Q psy9949 259 DAAGI 263 (383)
Q Consensus 259 d~~g~ 263 (383)
.+++.
T Consensus 86 h~A~~ 90 (338)
T PLN00198 86 HVATP 90 (338)
T ss_pred EeCCC
Confidence 99873
No 390
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=93.41 E-value=0.29 Score=45.00 Aligned_cols=73 Identities=19% Similarity=0.188 Sum_probs=44.5
Q ss_pred EEEEEcCCchHHHHHHHHHHHCC--CEEEEEecCc---hHHHHHhcC---CCee--eeCCChHHHHHHhcCCCccEEEEc
Q psy9949 191 RVLVLGASGGVGTMAVQLLKAWD--IEVVTTCSGD---AKDLVTSLN---PNLV--IDYNEPEAMHSIAGAGPYDVILDA 260 (383)
Q Consensus 191 ~VlI~ga~g~vG~~ai~la~~~G--~~Vi~~~~~~---~~~~~~~lg---~~~v--~~~~~~~~~~~i~~~~g~d~v~d~ 260 (383)
+|+|+||+|.+|..+++.+...| .+|+++.+.. +.+.+.++. ...+ .|..+.+....+.+...+|+||++
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~ 80 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF 80 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence 48999999999999999777666 6888876421 222222221 1112 244443333333333359999999
Q ss_pred CCC
Q psy9949 261 AGI 263 (383)
Q Consensus 261 ~g~ 263 (383)
++.
T Consensus 81 a~~ 83 (317)
T TIGR01181 81 AAE 83 (317)
T ss_pred ccc
Confidence 975
No 391
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.41 E-value=0.73 Score=40.53 Aligned_cols=76 Identities=26% Similarity=0.395 Sum_probs=48.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch--HH-HH---HhcCCC-ee--eeCCChHHHHH----Hh-cCCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA--KD-LV---TSLNPN-LV--IDYNEPEAMHS----IA-GAGP 253 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~--~~-~~---~~lg~~-~v--~~~~~~~~~~~----i~-~~~g 253 (383)
+.+++||+||+|++|..++..+...|.+|+++.+... .+ .. ...+.. .+ .|..+.+.... +. ..++
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 84 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGR 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence 4568999999999999999999999999877764432 11 11 222322 11 34444332222 11 1257
Q ss_pred ccEEEEcCCC
Q psy9949 254 YDVILDAAGI 263 (383)
Q Consensus 254 ~d~v~d~~g~ 263 (383)
+|.+|.++|.
T Consensus 85 id~vi~~ag~ 94 (249)
T PRK12825 85 IDILVNNAGI 94 (249)
T ss_pred CCEEEECCcc
Confidence 9999999984
No 392
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=93.39 E-value=0.29 Score=43.00 Aligned_cols=73 Identities=21% Similarity=0.351 Sum_probs=44.3
Q ss_pred EEEEEcCCchHHHHHHHHHHHCC--CEEEEEecCchHHHHHhcCCCee-eeCCChHHHHHHhc-CCCccEEEEcCCCC
Q psy9949 191 RVLVLGASGGVGTMAVQLLKAWD--IEVVTTCSGDAKDLVTSLNPNLV-IDYNEPEAMHSIAG-AGPYDVILDAAGIP 264 (383)
Q Consensus 191 ~VlI~ga~g~vG~~ai~la~~~G--~~Vi~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~i~~-~~g~d~v~d~~g~~ 264 (383)
+++|+||+|++|..+++.+...| ..++...++...+. ..-....+ .|..+.+..+++.+ .+++|++|+++|..
T Consensus 2 ~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG~~ 78 (235)
T PRK09009 2 NILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPDF-QHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVGML 78 (235)
T ss_pred EEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcccc-ccCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCccc
Confidence 68999999999998887776654 56666555432221 11011111 34444443333433 46899999999864
No 393
>PRK11579 putative oxidoreductase; Provisional
Probab=93.35 E-value=2.4 Score=39.86 Aligned_cols=138 Identities=15% Similarity=0.108 Sum_probs=75.8
Q ss_pred CEEEEEcCCchHHH-HHHHH-HHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCccc
Q psy9949 190 KRVLVLGASGGVGT-MAVQL-LKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQ 267 (383)
Q Consensus 190 ~~VlI~ga~g~vG~-~ai~l-a~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~ 267 (383)
-+|.|.| .|.+|. ..+.. .+.-+++++++++........+++...+ +. ++. .+.+...+|+|+.|+....-.
T Consensus 5 irvgiiG-~G~i~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~--~~--~~~-ell~~~~vD~V~I~tp~~~H~ 78 (346)
T PRK11579 5 IRVGLIG-YGYASKTFHAPLIAGTPGLELAAVSSSDATKVKADWPTVTV--VS--EPQ-HLFNDPNIDLIVIPTPNDTHF 78 (346)
T ss_pred ceEEEEC-CCHHHHHHHHHHHhhCCCCEEEEEECCCHHHHHhhCCCCce--eC--CHH-HHhcCCCCCEEEEcCCcHHHH
Confidence 4799999 899986 34443 3444789999986544333334433222 22 233 333445799999998876543
Q ss_pred ccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHc
Q psy9949 268 INSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIER 347 (383)
Q Consensus 268 ~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 347 (383)
..+ ..++. .|+-|++..|...+. .....-..... -.|..+..++.......+..+.+++++
T Consensus 79 ~~~-~~al~---aGkhVl~EKPla~t~-------~ea~~l~~~a~--------~~g~~l~v~~~~R~~p~~~~~k~~i~~ 139 (346)
T PRK11579 79 PLA-KAALE---AGKHVVVDKPFTVTL-------SQARELDALAK--------SAGRVLSVFHNRRWDSDFLTLKALLAE 139 (346)
T ss_pred HHH-HHHHH---CCCeEEEeCCCCCCH-------HHHHHHHHHHH--------HhCCEEEEEeeccCCHHHHHHHHHHhc
Confidence 332 55555 456677765543321 11111111111 112222223333446778888999999
Q ss_pred CCccc
Q psy9949 348 GQIKP 352 (383)
Q Consensus 348 g~l~~ 352 (383)
|.|-.
T Consensus 140 g~iG~ 144 (346)
T PRK11579 140 GVLGE 144 (346)
T ss_pred CCCCC
Confidence 98743
No 394
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=93.33 E-value=0.11 Score=39.70 Aligned_cols=91 Identities=18% Similarity=0.242 Sum_probs=54.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHH-HCCCEEEEEecC-chHHHHHh----cC-CCee--eeCCChHHHHHHhcCCCccEEE
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLK-AWDIEVVTTCSG-DAKDLVTS----LN-PNLV--IDYNEPEAMHSIAGAGPYDVIL 258 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~-~~G~~Vi~~~~~-~~~~~~~~----lg-~~~v--~~~~~~~~~~~i~~~~g~d~v~ 258 (383)
|+.+||-.| .+.|..++.+++ ..+++|++++-+ +..+.+++ .+ .+++ +..+ +........++|+|+
T Consensus 1 p~~~vLDlG--cG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d---~~~~~~~~~~~D~v~ 75 (112)
T PF12847_consen 1 PGGRVLDLG--CGTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGD---AEFDPDFLEPFDLVI 75 (112)
T ss_dssp TTCEEEEET--TTTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESC---CHGGTTTSSCEEEEE
T ss_pred CCCEEEEEc--CcCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECc---cccCcccCCCCCEEE
Confidence 578899998 456889999999 578899999954 43444332 22 2233 2222 211111234799999
Q ss_pred EcC-CCCcc--c------ccccccccccCCCceEEE
Q psy9949 259 DAA-GIPLD--Q------INSYLPFLKTGKFSKFVT 285 (383)
Q Consensus 259 d~~-g~~~~--~------~~~~~~~l~~~~~G~~v~ 285 (383)
... ..... . ...+.+.++ |+|+++.
T Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~~~L~--pgG~lvi 109 (112)
T PF12847_consen 76 CSGFTLHFLLPLDERRRVLERIRRLLK--PGGRLVI 109 (112)
T ss_dssp ECSGSGGGCCHHHHHHHHHHHHHHHEE--EEEEEEE
T ss_pred ECCCccccccchhHHHHHHHHHHHhcC--CCcEEEE
Confidence 877 32211 1 122366788 9999876
No 395
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=93.31 E-value=0.8 Score=43.72 Aligned_cols=72 Identities=21% Similarity=0.428 Sum_probs=51.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc-h-HHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD-A-KDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIP 264 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~-~-~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~ 264 (383)
.+.++||.| +|-+|..++..+...|. +|+..-+.. + .++++++|+. ++..++ ..+ ....+|+||-++|.+
T Consensus 177 ~~~~vlvIG-AGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~e--l~~---~l~~~DvVissTsa~ 249 (414)
T COG0373 177 KDKKVLVIG-AGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALEE--LLE---ALAEADVVISSTSAP 249 (414)
T ss_pred ccCeEEEEc-ccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHHH--HHH---hhhhCCEEEEecCCC
Confidence 678999999 89999999999999998 555555664 3 4678899954 332221 111 234699999999987
Q ss_pred cc
Q psy9949 265 LD 266 (383)
Q Consensus 265 ~~ 266 (383)
..
T Consensus 250 ~~ 251 (414)
T COG0373 250 HP 251 (414)
T ss_pred cc
Confidence 54
No 396
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=93.25 E-value=0.3 Score=46.77 Aligned_cols=75 Identities=19% Similarity=0.188 Sum_probs=51.9
Q ss_pred CCCEEEEEcC----------------CchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCC-hHHHHHHhc
Q psy9949 188 RDKRVLVLGA----------------SGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNE-PEAMHSIAG 250 (383)
Q Consensus 188 ~~~~VlI~ga----------------~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~-~~~~~~i~~ 250 (383)
+|++|+|+|| +|.+|.++++.+...|++|+.+.++...+. ..+. ..++..+ .+..+.+.+
T Consensus 187 ~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~~--~~~~-~~~dv~~~~~~~~~v~~ 263 (399)
T PRK05579 187 AGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLPT--PAGV-KRIDVESAQEMLDAVLA 263 (399)
T ss_pred CCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccccC--CCCc-EEEccCCHHHHHHHHHH
Confidence 6889999998 666999999999999999999986543211 1122 2344443 344444433
Q ss_pred -CCCccEEEEcCCCCc
Q psy9949 251 -AGPYDVILDAAGIPL 265 (383)
Q Consensus 251 -~~g~d~v~d~~g~~~ 265 (383)
.+.+|++|.+++...
T Consensus 264 ~~~~~DilI~~Aav~d 279 (399)
T PRK05579 264 ALPQADIFIMAAAVAD 279 (399)
T ss_pred hcCCCCEEEEcccccc
Confidence 357999999988654
No 397
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=93.24 E-value=0.8 Score=40.51 Aligned_cols=74 Identities=27% Similarity=0.353 Sum_probs=46.2
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCch-HH-H---HHhcCCCe-e--eeCCChH-HH---HHHhc-CCCcc
Q psy9949 190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGDA-KD-L---VTSLNPNL-V--IDYNEPE-AM---HSIAG-AGPYD 255 (383)
Q Consensus 190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~~-~~-~---~~~lg~~~-v--~~~~~~~-~~---~~i~~-~~g~d 255 (383)
++++|+||+|++|..+++.+...|++|+.+. ++.+ .+ . ++..+... . .|..+.. .. +.+.+ .+++|
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 82 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD 82 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence 4799999999999999998888899888765 3322 21 1 22233221 1 2333322 22 22222 35799
Q ss_pred EEEEcCCC
Q psy9949 256 VILDAAGI 263 (383)
Q Consensus 256 ~v~d~~g~ 263 (383)
++|.++|.
T Consensus 83 ~li~~ag~ 90 (248)
T PRK06947 83 ALVNNAGI 90 (248)
T ss_pred EEEECCcc
Confidence 99999984
No 398
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=93.22 E-value=0.26 Score=45.29 Aligned_cols=63 Identities=22% Similarity=0.317 Sum_probs=42.1
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949 191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGI 263 (383)
Q Consensus 191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~ 263 (383)
+|||+||+|-+|..+++.+...| +|+++++.... ...|..+.....++.+..++|+||.+++.
T Consensus 2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~~---------~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~ 64 (299)
T PRK09987 2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHSTD---------YCGDFSNPEGVAETVRKIRPDVIVNAAAH 64 (299)
T ss_pred eEEEECCCCHHHHHHHHHhhccC-CEEEecccccc---------ccCCCCCHHHHHHHHHhcCCCEEEECCcc
Confidence 69999999999999999888888 78877753210 01233443333333333468999998764
No 399
>PRK06940 short chain dehydrogenase; Provisional
Probab=93.21 E-value=0.66 Score=42.03 Aligned_cols=74 Identities=19% Similarity=0.337 Sum_probs=46.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHH---hcCCC-ee--eeCCChHHHH----HHhcCCCccE
Q psy9949 189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVT---SLNPN-LV--IDYNEPEAMH----SIAGAGPYDV 256 (383)
Q Consensus 189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~---~lg~~-~v--~~~~~~~~~~----~i~~~~g~d~ 256 (383)
+++++|.|+ |++|..++..+. .|++|+.+++++ +.+ ..+ ..+.. .. .|..+.+-.+ .+.+.+++|+
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG 79 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence 357899995 899999888875 799999998653 222 222 22322 11 3444433222 2223367999
Q ss_pred EEEcCCCC
Q psy9949 257 ILDAAGIP 264 (383)
Q Consensus 257 v~d~~g~~ 264 (383)
+|.++|..
T Consensus 80 li~nAG~~ 87 (275)
T PRK06940 80 LVHTAGVS 87 (275)
T ss_pred EEECCCcC
Confidence 99999853
No 400
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=93.21 E-value=0.35 Score=44.78 Aligned_cols=71 Identities=25% Similarity=0.348 Sum_probs=47.1
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949 191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGI 263 (383)
Q Consensus 191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~ 263 (383)
+|+|+|++|.+|..+++.+...|.+|++++++.. .......+...+ .|..+.+....+ ..++|+||.+++.
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~--~~~~d~vi~~a~~ 74 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKA--VAGCRALFHVAAD 74 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHH--HhCCCEEEEecee
Confidence 6999999999999999999888999999996543 222223343322 244443322221 2368999998864
No 401
>PLN02214 cinnamoyl-CoA reductase
Probab=93.21 E-value=0.45 Score=44.71 Aligned_cols=75 Identities=23% Similarity=0.300 Sum_probs=48.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH---HHHHhcC---CC-eee--eCCChHHHHHHhcCCCccEE
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK---DLVTSLN---PN-LVI--DYNEPEAMHSIAGAGPYDVI 257 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~---~~~~~lg---~~-~v~--~~~~~~~~~~i~~~~g~d~v 257 (383)
.++.+|+|+||+|.+|..++..+...|.+|++++++... .....+. .. .++ |..+....... ..++|+|
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~--~~~~d~V 85 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAA--IDGCDGV 85 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHH--HhcCCEE
Confidence 456789999999999999999998899999999865321 1122221 11 122 33332222221 2479999
Q ss_pred EEcCCC
Q psy9949 258 LDAAGI 263 (383)
Q Consensus 258 ~d~~g~ 263 (383)
|.+++.
T Consensus 86 ih~A~~ 91 (342)
T PLN02214 86 FHTASP 91 (342)
T ss_pred EEecCC
Confidence 999874
No 402
>PRK08219 short chain dehydrogenase; Provisional
Probab=93.20 E-value=0.67 Score=40.25 Aligned_cols=74 Identities=24% Similarity=0.381 Sum_probs=46.9
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHHH-hcCCCee--eeCCChHHH-HHHhcCCCccEEEEcCCCC
Q psy9949 190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLVT-SLNPNLV--IDYNEPEAM-HSIAGAGPYDVILDAAGIP 264 (383)
Q Consensus 190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~~-~lg~~~v--~~~~~~~~~-~~i~~~~g~d~v~d~~g~~ 264 (383)
++++|+||+|.+|..++..+... .+|++++++.. .+.+. ......+ .|..+.... +.+...+++|.+|.++|..
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~ 82 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGVA 82 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCcC
Confidence 57999999999999888877766 89999997642 22222 2221122 244333222 2222334799999998863
No 403
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=93.19 E-value=0.66 Score=42.01 Aligned_cols=74 Identities=23% Similarity=0.188 Sum_probs=53.7
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEe--cCchHHHHHhc-CCCeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949 191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTC--SGDAKDLVTSL-NPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIP 264 (383)
Q Consensus 191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~--~~~~~~~~~~l-g~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~ 264 (383)
+|||+||+|=+|.-++..+...|.+|++++ ++-..+.+... +.-..-|-.+..+.+++.+...+|.|+.+++..
T Consensus 2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~ 78 (329)
T COG1087 2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASI 78 (329)
T ss_pred eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECcccc
Confidence 699999999999888777777999999998 33334433332 222334666666777777777899999988864
No 404
>KOG1014|consensus
Probab=93.19 E-value=0.56 Score=42.53 Aligned_cols=77 Identities=16% Similarity=0.318 Sum_probs=51.5
Q ss_pred CCCCEEEEEcCCchHHHHH-HHHHHHCCCEEEEEecCc-hH-----HHHHhcCCC---eeeeCCChHH-HHHHhc-CC--
Q psy9949 187 PRDKRVLVLGASGGVGTMA-VQLLKAWDIEVVTTCSGD-AK-----DLVTSLNPN---LVIDYNEPEA-MHSIAG-AG-- 252 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~a-i~la~~~G~~Vi~~~~~~-~~-----~~~~~lg~~---~v~~~~~~~~-~~~i~~-~~-- 252 (383)
+.|++.+|+||+.++|.+- -+||+ .|.+|+.+.|+. ++ |+.++.++. .++|+..++. .+.+++ ..
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~ 125 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGL 125 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCC
Confidence 4578999999999999864 55555 899999999875 43 344445532 3367776552 333433 23
Q ss_pred CccEEEEcCCCC
Q psy9949 253 PYDVILDAAGIP 264 (383)
Q Consensus 253 g~d~v~d~~g~~ 264 (383)
.+-+.++++|..
T Consensus 126 ~VgILVNNvG~~ 137 (312)
T KOG1014|consen 126 DVGILVNNVGMS 137 (312)
T ss_pred ceEEEEeccccc
Confidence 466688988864
No 405
>KOG1209|consensus
Probab=93.15 E-value=0.75 Score=39.42 Aligned_cols=79 Identities=23% Similarity=0.384 Sum_probs=53.2
Q ss_pred CCCCEEEEEcC-CchHHHHHHHHHHHCCCEEEEEecC-chH-HHHHhcCCC-eeeeCCChH-H---HHHHhc--CCCccE
Q psy9949 187 PRDKRVLVLGA-SGGVGTMAVQLLKAWDIEVVTTCSG-DAK-DLVTSLNPN-LVIDYNEPE-A---MHSIAG--AGPYDV 256 (383)
Q Consensus 187 ~~~~~VlI~ga-~g~vG~~ai~la~~~G~~Vi~~~~~-~~~-~~~~~lg~~-~v~~~~~~~-~---~~~i~~--~~g~d~ 256 (383)
...+.|||.|. .||+|++++.-...-|+.|+++++. +.. .+..++|.. .-+|..+++ . ...+++ .+..|+
T Consensus 5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~ 84 (289)
T KOG1209|consen 5 SQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL 84 (289)
T ss_pred cCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence 45677888875 7899999888888889999999965 443 455567743 224444432 2 222333 357999
Q ss_pred EEEcCCCCc
Q psy9949 257 ILDAAGIPL 265 (383)
Q Consensus 257 v~d~~g~~~ 265 (383)
.++.+|-+.
T Consensus 85 L~NNAG~~C 93 (289)
T KOG1209|consen 85 LYNNAGQSC 93 (289)
T ss_pred EEcCCCCCc
Confidence 999988753
No 406
>PRK14982 acyl-ACP reductase; Provisional
Probab=93.14 E-value=1.2 Score=41.49 Aligned_cols=90 Identities=21% Similarity=0.296 Sum_probs=57.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHH-CCC-EEEEEecCc-hH-HHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKA-WDI-EVVTTCSGD-AK-DLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGI 263 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~-~G~-~Vi~~~~~~-~~-~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~ 263 (383)
.+++|+|+||+|.+|..+++.+.. .|. +++.+.+++ +. ++..+++...+. ++.+. ..+.|+|+.+++.
T Consensus 154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~-----~l~~~---l~~aDiVv~~ts~ 225 (340)
T PRK14982 154 SKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL-----SLEEA---LPEADIVVWVASM 225 (340)
T ss_pred CCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH-----hHHHH---HccCCEEEECCcC
Confidence 678999999889999998888864 565 788777654 33 334444422221 22222 2468999999987
Q ss_pred Cccc-ccccccccccCCCceEEEecCC
Q psy9949 264 PLDQ-INSYLPFLKTGKFSKFVTLRSP 289 (383)
Q Consensus 264 ~~~~-~~~~~~~l~~~~~G~~v~~~~~ 289 (383)
+... .. ...+. +.-.+++++.|
T Consensus 226 ~~~~~I~--~~~l~--~~~~viDiAvP 248 (340)
T PRK14982 226 PKGVEID--PETLK--KPCLMIDGGYP 248 (340)
T ss_pred CcCCcCC--HHHhC--CCeEEEEecCC
Confidence 5542 22 34455 67777777654
No 407
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=93.09 E-value=1.4 Score=35.89 Aligned_cols=91 Identities=18% Similarity=0.232 Sum_probs=55.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecCc-hH-HHHHhcCCCe-eeeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWD-IEVVTTCSGD-AK-DLVTSLNPNL-VIDYNEPEAMHSIAGAGPYDVILDAAGI 263 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G-~~Vi~~~~~~-~~-~~~~~lg~~~-v~~~~~~~~~~~i~~~~g~d~v~d~~g~ 263 (383)
++.+++|.| +|++|...++.+...| .+|++..++. +. +++++++... ..... +..+. ..++|+|+.|++.
T Consensus 18 ~~~~i~iiG-~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~Dvvi~~~~~ 91 (155)
T cd01065 18 KGKKVLILG-AGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL--DLEEL---LAEADLIINTTPV 91 (155)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec--chhhc---cccCCEEEeCcCC
Confidence 568899999 6999999998888886 5788887653 33 3455555421 01111 11111 3579999999987
Q ss_pred Ccc---cccccccccccCCCceEEEe
Q psy9949 264 PLD---QINSYLPFLKTGKFSKFVTL 286 (383)
Q Consensus 264 ~~~---~~~~~~~~l~~~~~G~~v~~ 286 (383)
... ........++ ++..++++
T Consensus 92 ~~~~~~~~~~~~~~~~--~~~~v~D~ 115 (155)
T cd01065 92 GMKPGDELPLPPSLLK--PGGVVYDV 115 (155)
T ss_pred CCCCCCCCCCCHHHcC--CCCEEEEc
Confidence 653 1110023345 66666665
No 408
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=93.05 E-value=0.74 Score=40.57 Aligned_cols=74 Identities=23% Similarity=0.358 Sum_probs=47.4
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCc-hH-HH---HHhcCCC-ee--eeCCChHHHHHH----h-cCCCcc
Q psy9949 190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGD-AK-DL---VTSLNPN-LV--IDYNEPEAMHSI----A-GAGPYD 255 (383)
Q Consensus 190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~-~~-~~---~~~lg~~-~v--~~~~~~~~~~~i----~-~~~g~d 255 (383)
++++|+||+|++|..++..+...|++|+++. ++. +. +. .++.+.. .+ .|..+.+..+++ . ..+++|
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id 81 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA 81 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 4799999999999999998888899988754 432 21 22 2233322 12 344443323222 1 236799
Q ss_pred EEEEcCCC
Q psy9949 256 VILDAAGI 263 (383)
Q Consensus 256 ~v~d~~g~ 263 (383)
++|.++|.
T Consensus 82 ~vi~~ag~ 89 (247)
T PRK09730 82 ALVNNAGI 89 (247)
T ss_pred EEEECCCC
Confidence 99999985
No 409
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.01 E-value=0.52 Score=42.11 Aligned_cols=33 Identities=24% Similarity=0.387 Sum_probs=29.1
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEe
Q psy9949 188 RDKRVLVLGAS--GGVGTMAVQLLKAWDIEVVTTC 220 (383)
Q Consensus 188 ~~~~VlI~ga~--g~vG~~ai~la~~~G~~Vi~~~ 220 (383)
++++++|+||+ +++|..++..+...|++|+.++
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~ 39 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTY 39 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEe
Confidence 67899999987 4899999999999999998875
No 410
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.01 E-value=0.66 Score=41.36 Aligned_cols=35 Identities=34% Similarity=0.405 Sum_probs=29.6
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecC
Q psy9949 188 RDKRVLVLGAS--GGVGTMAVQLLKAWDIEVVTTCSG 222 (383)
Q Consensus 188 ~~~~VlI~ga~--g~vG~~ai~la~~~G~~Vi~~~~~ 222 (383)
.+++++|+||+ |++|..++..+...|++|++++++
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~ 40 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS 40 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence 45789999987 489999888888889999998854
No 411
>PRK07201 short chain dehydrogenase; Provisional
Probab=93.00 E-value=0.65 Score=47.79 Aligned_cols=75 Identities=24% Similarity=0.326 Sum_probs=49.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHH---hcCCC-ee--eeCCChHHHHH----Hh-cCCCcc
Q psy9949 189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVT---SLNPN-LV--IDYNEPEAMHS----IA-GAGPYD 255 (383)
Q Consensus 189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~---~lg~~-~v--~~~~~~~~~~~----i~-~~~g~d 255 (383)
+++++|+||+|++|..++..+...|++|+++++++. . +... ..+.. .+ .|..+..-.++ +. ..+++|
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 450 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVD 450 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 678999999999999999888888999999996542 2 2222 22322 11 34444332222 22 235799
Q ss_pred EEEEcCCC
Q psy9949 256 VILDAAGI 263 (383)
Q Consensus 256 ~v~d~~g~ 263 (383)
++|.++|.
T Consensus 451 ~li~~Ag~ 458 (657)
T PRK07201 451 YLVNNAGR 458 (657)
T ss_pred EEEECCCC
Confidence 99999985
No 412
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=92.99 E-value=0.86 Score=43.06 Aligned_cols=93 Identities=18% Similarity=0.315 Sum_probs=59.9
Q ss_pred CEEEEEcCCchHHHHHHHHHHHC--CCEEEEEe-cCc--h-HHHHHhcCCCeeeeCCChH---HHHHH------------
Q psy9949 190 KRVLVLGASGGVGTMAVQLLKAW--DIEVVTTC-SGD--A-KDLVTSLNPNLVIDYNEPE---AMHSI------------ 248 (383)
Q Consensus 190 ~~VlI~ga~g~vG~~ai~la~~~--G~~Vi~~~-~~~--~-~~~~~~lg~~~v~~~~~~~---~~~~i------------ 248 (383)
++|.|.|++|++|..++.+.+.. .++|++++ +.. + .+.+++++...+.-.++.. +.+.+
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~~ 81 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGEE 81 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEEChh
Confidence 57999999999999999998865 46899988 332 2 2566788887765444321 11111
Q ss_pred -----hcCCCccEEEEcCCCCcccccccccccccCCCceEEE
Q psy9949 249 -----AGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVT 285 (383)
Q Consensus 249 -----~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~ 285 (383)
.+...+|+|+.+.++....... +.+++ .+-++.+
T Consensus 82 ~~~~l~~~~~vD~Vv~Ai~G~aGl~pt-l~Ai~--aGK~VaL 120 (385)
T PRK05447 82 GLCELAALPEADVVVAAIVGAAGLLPT-LAAIR--AGKRIAL 120 (385)
T ss_pred HHHHHhcCCCCCEEEEeCcCcccHHHH-HHHHH--CCCcEEE
Confidence 1123589999998876443322 66666 5545544
No 413
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=92.99 E-value=1.1 Score=38.63 Aligned_cols=68 Identities=21% Similarity=0.123 Sum_probs=44.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIP 264 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~ 264 (383)
.|.+++|.| .|.+|..+++.+...|++|++.+++. +.+ +...+++. .++.. .+.. ..+|+++-|+.+.
T Consensus 27 ~gk~v~I~G-~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~-~v~~~------~l~~-~~~Dv~vp~A~~~ 96 (200)
T cd01075 27 EGKTVAVQG-LGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGAT-VVAPE------EIYS-VDADVFAPCALGG 96 (200)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE-EEcch------hhcc-ccCCEEEeccccc
Confidence 678999999 89999999999999999999777553 333 33455643 22221 1111 1477777665443
No 414
>PLN02572 UDP-sulfoquinovose synthase
Probab=92.98 E-value=0.55 Score=45.81 Aligned_cols=33 Identities=27% Similarity=0.366 Sum_probs=30.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC 220 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~ 220 (383)
++++|||+||+|.+|..+++.+...|++|++++
T Consensus 46 ~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d 78 (442)
T PLN02572 46 KKKKVMVIGGDGYCGWATALHLSKRGYEVAIVD 78 (442)
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEe
Confidence 567899999999999999999998999999976
No 415
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=92.98 E-value=0.82 Score=41.36 Aligned_cols=90 Identities=17% Similarity=0.178 Sum_probs=54.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-h-HHHHHhcC---CCeeeeCCChHHHHHHhcCCCccEEEEcC
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-A-KDLVTSLN---PNLVIDYNEPEAMHSIAGAGPYDVILDAA 261 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~-~~~~~~lg---~~~v~~~~~~~~~~~i~~~~g~d~v~d~~ 261 (383)
..+++++|.| +|++|.+++..+...|++|+++.++. + .++++.+. ....... .+ .....+|+||+|+
T Consensus 115 ~~~k~vliiG-aGg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~-----~~--~~~~~~DivInat 186 (270)
T TIGR00507 115 RPNQRVLIIG-AGGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSM-----DE--LPLHRVDLIINAT 186 (270)
T ss_pred ccCCEEEEEc-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEech-----hh--hcccCccEEEECC
Confidence 4578999999 69999999888888899888887654 3 23444432 2122211 11 1124689999999
Q ss_pred CCCcccc---ccc-ccccccCCCceEEEe
Q psy9949 262 GIPLDQI---NSY-LPFLKTGKFSKFVTL 286 (383)
Q Consensus 262 g~~~~~~---~~~-~~~l~~~~~G~~v~~ 286 (383)
+...... ..+ ...++ ++..++++
T Consensus 187 p~gm~~~~~~~~~~~~~l~--~~~~v~D~ 213 (270)
T TIGR00507 187 SAGMSGNIDEPPVPAEKLK--EGMVVYDM 213 (270)
T ss_pred CCCCCCCCCCCCCCHHHcC--CCCEEEEe
Confidence 8642111 000 23455 66667766
No 416
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.98 E-value=0.81 Score=41.45 Aligned_cols=94 Identities=17% Similarity=0.052 Sum_probs=64.5
Q ss_pred hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHH
Q psy9949 165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEA 244 (383)
Q Consensus 165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~ 244 (383)
.||+....+..|. ..++. -.|++|+|.|.+.-+|.-+..++...|++|+..-+. ..++
T Consensus 139 ~PcTp~av~~ll~-~~~i~---l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~------------------T~~l 196 (285)
T PRK10792 139 RPCTPRGIMTLLE-RYGID---TYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRF------------------TKNL 196 (285)
T ss_pred CCCCHHHHHHHHH-HcCCC---CCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECC------------------CCCH
Confidence 3455444444554 33331 268999999977779999999999999988777543 1122
Q ss_pred HHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949 245 MHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS 288 (383)
Q Consensus 245 ~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~ 288 (383)
.+.+ ..+|++|.++|.+.... -+.++ ++..++++|-
T Consensus 197 ~~~~---~~ADIvi~avG~p~~v~---~~~vk--~gavVIDvGi 232 (285)
T PRK10792 197 RHHV---RNADLLVVAVGKPGFIP---GEWIK--PGAIVIDVGI 232 (285)
T ss_pred HHHH---hhCCEEEEcCCCccccc---HHHcC--CCcEEEEccc
Confidence 2222 35899999999988633 45777 8888888863
No 417
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=92.97 E-value=0.3 Score=42.09 Aligned_cols=75 Identities=17% Similarity=0.160 Sum_probs=47.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH---HHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK---DLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIP 264 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~---~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~ 264 (383)
.+++|+|.| +|.+|...+..+...|++|+++...... +++.. +.- .+.... +.+ .+..++|+||-|++.+
T Consensus 9 ~~k~vLVIG-gG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~-~~i-~~~~~~--~~~--~~l~~adlViaaT~d~ 81 (202)
T PRK06718 9 SNKRVVIVG-GGKVAGRRAITLLKYGAHIVVISPELTENLVKLVEE-GKI-RWKQKE--FEP--SDIVDAFLVIAATNDP 81 (202)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhC-CCE-EEEecC--CCh--hhcCCceEEEEcCCCH
Confidence 678999999 7999999998888889999888744222 22222 211 111111 111 1124788999888887
Q ss_pred ccccc
Q psy9949 265 LDQIN 269 (383)
Q Consensus 265 ~~~~~ 269 (383)
.....
T Consensus 82 elN~~ 86 (202)
T PRK06718 82 RVNEQ 86 (202)
T ss_pred HHHHH
Confidence 65443
No 418
>PRK07069 short chain dehydrogenase; Validated
Probab=92.97 E-value=0.56 Score=41.52 Aligned_cols=73 Identities=19% Similarity=0.352 Sum_probs=46.7
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEecC-c-hHH-HHHhc----CCCee----eeCCChHHHHH----Hhc-CCCcc
Q psy9949 192 VLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-D-AKD-LVTSL----NPNLV----IDYNEPEAMHS----IAG-AGPYD 255 (383)
Q Consensus 192 VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~-~~~-~~~~l----g~~~v----~~~~~~~~~~~----i~~-~~g~d 255 (383)
++|+||+|++|..+++.+...|++|+++.++ . +.+ ...++ +...+ .|..+..-.+. +.+ .+++|
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS 81 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence 7999999999999998888889999999865 3 222 22222 22111 24444332222 222 35799
Q ss_pred EEEEcCCCC
Q psy9949 256 VILDAAGIP 264 (383)
Q Consensus 256 ~v~d~~g~~ 264 (383)
++|.++|..
T Consensus 82 ~vi~~ag~~ 90 (251)
T PRK07069 82 VLVNNAGVG 90 (251)
T ss_pred EEEECCCcC
Confidence 999998853
No 419
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.95 E-value=0.41 Score=42.20 Aligned_cols=77 Identities=27% Similarity=0.438 Sum_probs=48.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEE-ecCc-hH-HHHH---hcCCC-ee--eeCCChHHHHHHh-----cCCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTT-CSGD-AK-DLVT---SLNPN-LV--IDYNEPEAMHSIA-----GAGP 253 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~-~~~~-~~-~~~~---~lg~~-~v--~~~~~~~~~~~i~-----~~~g 253 (383)
.+++++|+||+|++|..++..+...|++|+.+ .++. +. +... ..+.. .+ .|..+..-...+. +.++
T Consensus 4 ~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK05565 4 MGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGK 83 (247)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 35689999999999999988888889999888 6543 22 2222 22221 12 2444433222221 2357
Q ss_pred ccEEEEcCCCC
Q psy9949 254 YDVILDAAGIP 264 (383)
Q Consensus 254 ~d~v~d~~g~~ 264 (383)
+|++|.++|..
T Consensus 84 id~vi~~ag~~ 94 (247)
T PRK05565 84 IDILVNNAGIS 94 (247)
T ss_pred CCEEEECCCcC
Confidence 99999998853
No 420
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=92.89 E-value=0.61 Score=43.49 Aligned_cols=74 Identities=23% Similarity=0.293 Sum_probs=47.5
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-ch-HH---HHHhcCCC--ee--eeCCChHHHHHHhcCCCccEEEEcC
Q psy9949 191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DA-KD---LVTSLNPN--LV--IDYNEPEAMHSIAGAGPYDVILDAA 261 (383)
Q Consensus 191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~-~~---~~~~lg~~--~v--~~~~~~~~~~~i~~~~g~d~v~d~~ 261 (383)
+|+|+||+|.+|..++..+...|.+|+++++. +. .. .+.+++.. .. .|..+......+....++|+||+++
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~a 81 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHFA 81 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEECC
Confidence 58999999999999998888889999988643 21 11 12222211 12 3444444444433335799999998
Q ss_pred CCC
Q psy9949 262 GIP 264 (383)
Q Consensus 262 g~~ 264 (383)
+..
T Consensus 82 ~~~ 84 (338)
T PRK10675 82 GLK 84 (338)
T ss_pred ccc
Confidence 743
No 421
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=92.87 E-value=0.53 Score=44.30 Aligned_cols=47 Identities=26% Similarity=0.278 Sum_probs=37.0
Q ss_pred HHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q psy9949 171 TAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG 222 (383)
Q Consensus 171 tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~ 222 (383)
|||.-|+....+ +..+|+|+||+|=+|..++..+...|.+|+++++.
T Consensus 2 ~~~~~~~~~~~~-----~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~ 48 (348)
T PRK15181 2 TAYEELRTKLVL-----APKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNF 48 (348)
T ss_pred chhhhhhhcccc-----cCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 456555433332 55789999999999999999999889999999853
No 422
>PRK07041 short chain dehydrogenase; Provisional
Probab=92.82 E-value=0.5 Score=41.27 Aligned_cols=71 Identities=24% Similarity=0.336 Sum_probs=46.6
Q ss_pred EEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHhc--CCC-ee--eeCCChHHH-HHHhcCCCccEEEEcCCC
Q psy9949 193 LVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTSL--NPN-LV--IDYNEPEAM-HSIAGAGPYDVILDAAGI 263 (383)
Q Consensus 193 lI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~l--g~~-~v--~~~~~~~~~-~~i~~~~g~d~v~d~~g~ 263 (383)
+|+||+|++|..+++.+...|++|++++++. +.+ ....+ +.. .+ .|..+..-. +.+.+.+.+|.+|.++|.
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~ 79 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAAD 79 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCC
Confidence 5899999999999988888999999998763 222 22222 221 22 344443322 333334678999999885
No 423
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=92.80 E-value=0.4 Score=49.37 Aligned_cols=74 Identities=18% Similarity=0.342 Sum_probs=49.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch----------------------HHHHHhcCCCeeeeCC---Ch
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA----------------------KDLVTSLNPNLVIDYN---EP 242 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~----------------------~~~~~~lg~~~v~~~~---~~ 242 (383)
.+++|+|.| +|..|+.++..++..|.+|+++.+.+. .+.++++|.+...+.. +.
T Consensus 326 ~~~~VaIIG-aGpAGLsaA~~L~~~G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~i 404 (654)
T PRK12769 326 SDKRVAIIG-AGPAGLACADVLARNGVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKDI 404 (654)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCcC
Confidence 578999999 899999999999999999888874321 2344566754332221 11
Q ss_pred HHHHHHhcCCCccEEEEcCCCCc
Q psy9949 243 EAMHSIAGAGPYDVILDAAGIPL 265 (383)
Q Consensus 243 ~~~~~i~~~~g~d~v~d~~g~~~ 265 (383)
.+ +.+ ..++|.||.++|...
T Consensus 405 ~~-~~~--~~~~DavilAtGa~~ 424 (654)
T PRK12769 405 SL-ESL--LEDYDAVFVGVGTYR 424 (654)
T ss_pred CH-HHH--HhcCCEEEEeCCCCC
Confidence 11 111 136999999999753
No 424
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=92.78 E-value=0.52 Score=41.02 Aligned_cols=92 Identities=23% Similarity=0.150 Sum_probs=56.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecCch-HH----HHHhcCCCee--eeCCChHHHHHHhcCCCccEE
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDI--EVVTTCSGDA-KD----LVTSLNPNLV--IDYNEPEAMHSIAGAGPYDVI 257 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~--~Vi~~~~~~~-~~----~~~~lg~~~v--~~~~~~~~~~~i~~~~g~d~v 257 (383)
+++++||-.| +|.|..++.+++..+. +|+++..++. .+ .+++.|.+++ +..+. .+.......||+|
T Consensus 76 ~~~~~VLDiG--~GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~---~~~~~~~~~fD~I 150 (215)
T TIGR00080 76 KPGMKVLEIG--TGSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDG---TQGWEPLAPYDRI 150 (215)
T ss_pred CCcCEEEEEC--CCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCc---ccCCcccCCCCEE
Confidence 8899999998 5568888888887654 6999985543 23 3345555433 22111 1111123479998
Q ss_pred EEcCCCCcccccccccccccCCCceEEEe
Q psy9949 258 LDAAGIPLDQINSYLPFLKTGKFSKFVTL 286 (383)
Q Consensus 258 ~d~~g~~~~~~~~~~~~l~~~~~G~~v~~ 286 (383)
+-.......... +.+.++ ++|+++..
T Consensus 151 i~~~~~~~~~~~-~~~~L~--~gG~lv~~ 176 (215)
T TIGR00080 151 YVTAAGPKIPEA-LIDQLK--EGGILVMP 176 (215)
T ss_pred EEcCCcccccHH-HHHhcC--cCcEEEEE
Confidence 865444433322 378889 99998864
No 425
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=92.78 E-value=0.25 Score=41.23 Aligned_cols=48 Identities=27% Similarity=0.368 Sum_probs=35.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCee
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLV 236 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v 236 (383)
+..+|+|.| +|.+|+.|+.+++.+|++|+..+.. ++.+.....+...+
T Consensus 19 ~p~~vvv~G-~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i 67 (168)
T PF01262_consen 19 PPAKVVVTG-AGRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFI 67 (168)
T ss_dssp -T-EEEEES-TSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEES
T ss_pred CCeEEEEEC-CCHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceE
Confidence 346899999 9999999999999999999999854 44555566655433
No 426
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=92.77 E-value=0.4 Score=44.37 Aligned_cols=35 Identities=34% Similarity=0.339 Sum_probs=31.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG 222 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~ 222 (383)
.+.+|||+||+|-+|..++..+...|.+|++++++
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~ 37 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRD 37 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 46789999999999999999999999999988854
No 427
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=92.73 E-value=0.65 Score=41.16 Aligned_cols=78 Identities=23% Similarity=0.371 Sum_probs=49.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-ch--HHHH-HhcC-----CCee--eeCCC-hHH----HHHHhc
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DA--KDLV-TSLN-----PNLV--IDYNE-PEA----MHSIAG 250 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~--~~~~-~~lg-----~~~v--~~~~~-~~~----~~~i~~ 250 (383)
..+++++|+|+++++|.+++..+...|++|+++.+. +. .+.+ .... .... .|..+ ... .+++.+
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~ 82 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE 82 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence 367899999999999999988888999998888744 22 2222 1111 1111 34443 222 222222
Q ss_pred -CCCccEEEEcCCCC
Q psy9949 251 -AGPYDVILDAAGIP 264 (383)
Q Consensus 251 -~~g~d~v~d~~g~~ 264 (383)
.+++|++++++|..
T Consensus 83 ~~g~id~lvnnAg~~ 97 (251)
T COG1028 83 EFGRIDILVNNAGIA 97 (251)
T ss_pred HcCCCCEEEECCCCC
Confidence 36799999999863
No 428
>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]
Probab=92.69 E-value=1.6 Score=39.60 Aligned_cols=71 Identities=20% Similarity=0.290 Sum_probs=50.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEE
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILD 259 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d 259 (383)
...+|+++| +|-+|.-.+.-++.+|.+|+++++=...-.-.-....+|+|--+.+....+-+...+|.++-
T Consensus 11 ~a~kvmLLG-SGELGKEvaIe~QRLG~eViAVDrY~~APAmqVAhrs~Vi~MlD~~al~avv~rekPd~IVp 81 (394)
T COG0027 11 QATKVMLLG-SGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVAHRSYVIDMLDGDALRAVVEREKPDYIVP 81 (394)
T ss_pred CCeEEEEec-CCccchHHHHHHHhcCCEEEEecCcCCChhhhhhhheeeeeccCHHHHHHHHHhhCCCeeee
Confidence 446799999 99999999999999999999999643321111111235777777776666666678898873
No 429
>PLN00016 RNA-binding protein; Provisional
Probab=92.69 E-value=0.48 Score=45.18 Aligned_cols=97 Identities=21% Similarity=0.277 Sum_probs=58.5
Q ss_pred CCCEEEEE----cCCchHHHHHHHHHHHCCCEEEEEecCchH-HH-----------HHhcCCCeeeeCCChHHHHHHhcC
Q psy9949 188 RDKRVLVL----GASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DL-----------VTSLNPNLVIDYNEPEAMHSIAGA 251 (383)
Q Consensus 188 ~~~~VlI~----ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~-~~-----------~~~lg~~~v~~~~~~~~~~~i~~~ 251 (383)
...+|||+ ||+|-+|..++..+...|.+|++++++... .. +...+...+ ..+-.++.+.+ ..
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v-~~D~~d~~~~~-~~ 128 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTV-WGDPADVKSKV-AG 128 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEE-EecHHHHHhhh-cc
Confidence 34689999 999999999999888889999999965421 11 112233322 22222323222 34
Q ss_pred CCccEEEEcCCCCcccccccccccccCCC--ceEEEecC
Q psy9949 252 GPYDVILDAAGIPLDQINSYLPFLKTGKF--SKFVTLRS 288 (383)
Q Consensus 252 ~g~d~v~d~~g~~~~~~~~~~~~l~~~~~--G~~v~~~~ 288 (383)
.++|+||++.+........+++.+. .. .++|.+++
T Consensus 129 ~~~d~Vi~~~~~~~~~~~~ll~aa~--~~gvkr~V~~SS 165 (378)
T PLN00016 129 AGFDVVYDNNGKDLDEVEPVADWAK--SPGLKQFLFCSS 165 (378)
T ss_pred CCccEEEeCCCCCHHHHHHHHHHHH--HcCCCEEEEEcc
Confidence 5899999998754321222244443 23 36777653
No 430
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=92.63 E-value=0.32 Score=43.92 Aligned_cols=58 Identities=29% Similarity=0.496 Sum_probs=40.8
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949 192 VLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGI 263 (383)
Q Consensus 192 VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~ 263 (383)
+||+|+.|.+|..+.+++. -+.+|+++.+.+ +|-.+.+...++.....+|+||+|+.-
T Consensus 3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-------------~Ditd~~~v~~~i~~~~PDvVIn~AAy 60 (281)
T COG1091 3 ILITGANGQLGTELRRALP-GEFEVIATDRAE-------------LDITDPDAVLEVIRETRPDVVINAAAY 60 (281)
T ss_pred EEEEcCCChHHHHHHHHhC-CCceEEeccCcc-------------ccccChHHHHHHHHhhCCCEEEECccc
Confidence 8999999999999888888 556999998664 233333333343334467888887664
No 431
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=92.61 E-value=0.34 Score=44.04 Aligned_cols=71 Identities=15% Similarity=0.290 Sum_probs=47.5
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCe-eeeCCChHHH-HHHh---cCCC-ccEEEEcCCC
Q psy9949 191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNL-VIDYNEPEAM-HSIA---GAGP-YDVILDAAGI 263 (383)
Q Consensus 191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~-v~~~~~~~~~-~~i~---~~~g-~d~v~d~~g~ 263 (383)
+|+|+||+|.+|..+++.+...|.+|.+++++.+... ..+... ..|+.+.+.. +.+. ...| +|.+|-+.+.
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~--~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~ 77 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA--GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPP 77 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc--CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCC
Confidence 4899999999999999999888999999997643211 123222 2466654433 3332 1246 8999887764
No 432
>KOG1502|consensus
Probab=92.61 E-value=0.75 Score=42.38 Aligned_cols=73 Identities=25% Similarity=0.282 Sum_probs=50.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH---HHHHhcCC-C---eee--eCCC-hHHHHHHhcCCCccE
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK---DLVTSLNP-N---LVI--DYNE-PEAMHSIAGAGPYDV 256 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~---~~~~~lg~-~---~v~--~~~~-~~~~~~i~~~~g~d~ 256 (383)
.+.+|.|+||+|=+|...+..+...|++|.+++|+. +. +.++++.. . .++ |-.+ ..|.+.+ .|+|.
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai---~gcdg 81 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAI---DGCDG 81 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHH---hCCCE
Confidence 678999999999999999999999999999999664 22 34566542 1 122 2111 2233322 47999
Q ss_pred EEEcCCC
Q psy9949 257 ILDAAGI 263 (383)
Q Consensus 257 v~d~~g~ 263 (383)
||.++.-
T Consensus 82 VfH~Asp 88 (327)
T KOG1502|consen 82 VFHTASP 88 (327)
T ss_pred EEEeCcc
Confidence 9987764
No 433
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=92.60 E-value=0.19 Score=45.77 Aligned_cols=67 Identities=18% Similarity=0.174 Sum_probs=43.8
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH-HHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949 192 VLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIP 264 (383)
Q Consensus 192 VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~-~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~ 264 (383)
|||+||+|-+|..+++.+...|.+|++++++... ......+ +.+....... ....++|+||.+++..
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~---~~~~~~D~Vvh~a~~~ 68 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEG---YKPWAPLAES---EALEGADAVINLAGEP 68 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccccee---eecccccchh---hhcCCCCEEEECCCCC
Confidence 6899999999999999888889999999965432 2111111 1111111111 1235799999999853
No 434
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=92.59 E-value=0.21 Score=45.71 Aligned_cols=92 Identities=17% Similarity=0.088 Sum_probs=52.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHH----hcCCC-eeeeCCChHHHHHHhcCCCccEEEE
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVT----SLNPN-LVIDYNEPEAMHSIAGAGPYDVILD 259 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~----~lg~~-~v~~~~~~~~~~~i~~~~g~d~v~d 259 (383)
.++++||-.| +|. |.+++.+++ .|+ +|++++.+ ...+.++ ..+.. .+..... +... ...++||+|+.
T Consensus 158 ~~g~~VLDvG-cGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~-~~~~--~~~~~fDlVva 231 (288)
T TIGR00406 158 LKDKNVIDVG-CGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI-YLEQ--PIEGKADVIVA 231 (288)
T ss_pred CCCCEEEEeC-CCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-cccc--ccCCCceEEEE
Confidence 5788999998 665 888877776 466 89999954 3333332 22221 1111111 0110 01247999997
Q ss_pred cCCCCcc--cccccccccccCCCceEEEe
Q psy9949 260 AAGIPLD--QINSYLPFLKTGKFSKFVTL 286 (383)
Q Consensus 260 ~~g~~~~--~~~~~~~~l~~~~~G~~v~~ 286 (383)
....... ....+.++++ ++|.++..
T Consensus 232 n~~~~~l~~ll~~~~~~Lk--pgG~li~s 258 (288)
T TIGR00406 232 NILAEVIKELYPQFSRLVK--PGGWLILS 258 (288)
T ss_pred ecCHHHHHHHHHHHHHHcC--CCcEEEEE
Confidence 6543321 1111257888 99999875
No 435
>PLN02928 oxidoreductase family protein
Probab=92.57 E-value=0.59 Score=43.95 Aligned_cols=94 Identities=17% Similarity=0.257 Sum_probs=56.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcC----C-Ceeee--CCChHHHHHHhcCCCccEEEEc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLN----P-NLVID--YNEPEAMHSIAGAGPYDVILDA 260 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg----~-~~v~~--~~~~~~~~~i~~~~g~d~v~d~ 260 (383)
.|+++.|.| .|.+|..+++.++.+|++|++..+..+.+....++ . ....+ ....++.+-+ ...|+|+.+
T Consensus 158 ~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell---~~aDiVvl~ 233 (347)
T PLN02928 158 FGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFA---GEADIVVLC 233 (347)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHH---hhCCEEEEC
Confidence 578999999 99999999999999999999988652221111110 0 00000 0111223222 357998887
Q ss_pred CCCCc----ccccccccccccCCCceEEEec
Q psy9949 261 AGIPL----DQINSYLPFLKTGKFSKFVTLR 287 (383)
Q Consensus 261 ~g~~~----~~~~~~~~~l~~~~~G~~v~~~ 287 (383)
..... ......++.|+ ++..+|.++
T Consensus 234 lPlt~~T~~li~~~~l~~Mk--~ga~lINva 262 (347)
T PLN02928 234 CTLTKETAGIVNDEFLSSMK--KGALLVNIA 262 (347)
T ss_pred CCCChHhhcccCHHHHhcCC--CCeEEEECC
Confidence 76432 11122267788 888888774
No 436
>PLN02686 cinnamoyl-CoA reductase
Probab=92.55 E-value=0.51 Score=44.83 Aligned_cols=36 Identities=19% Similarity=0.139 Sum_probs=32.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG 222 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~ 222 (383)
..+++|||+||+|.+|..++..+...|++|++++++
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~ 86 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDT 86 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCC
Confidence 567899999999999999999999999999887754
No 437
>PLN00015 protochlorophyllide reductase
Probab=92.55 E-value=0.54 Score=43.38 Aligned_cols=71 Identities=21% Similarity=0.332 Sum_probs=46.4
Q ss_pred EEEcCCchHHHHHHHHHHHCC-CEEEEEecCch-H-HHHHhcCC--Ce----eeeCCChHHH----HHHhc-CCCccEEE
Q psy9949 193 LVLGASGGVGTMAVQLLKAWD-IEVVTTCSGDA-K-DLVTSLNP--NL----VIDYNEPEAM----HSIAG-AGPYDVIL 258 (383)
Q Consensus 193 lI~ga~g~vG~~ai~la~~~G-~~Vi~~~~~~~-~-~~~~~lg~--~~----v~~~~~~~~~----~~i~~-~~g~d~v~ 258 (383)
+|+||++++|..+++.+...| ++|+.+++++. . +.+.+++. .. ..|..+.+-. +.+.+ .+++|++|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 589999999999988888889 89999886643 2 23333321 11 1355443322 23322 25799999
Q ss_pred EcCCC
Q psy9949 259 DAAGI 263 (383)
Q Consensus 259 d~~g~ 263 (383)
+++|.
T Consensus 81 nnAG~ 85 (308)
T PLN00015 81 CNAAV 85 (308)
T ss_pred ECCCc
Confidence 99985
No 438
>PRK06123 short chain dehydrogenase; Provisional
Probab=92.49 E-value=1.2 Score=39.38 Aligned_cols=76 Identities=20% Similarity=0.320 Sum_probs=47.1
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCc-hH-H---HHHhcCCCe-e--eeCCChH-HHH---HHhc-CCCc
Q psy9949 189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGD-AK-D---LVTSLNPNL-V--IDYNEPE-AMH---SIAG-AGPY 254 (383)
Q Consensus 189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~-~~-~---~~~~lg~~~-v--~~~~~~~-~~~---~i~~-~~g~ 254 (383)
+++++|+|++|++|..+++.+...|++|+... +++ +. + .++..+... . .|..+.. +.+ .+.+ .+.+
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 35899999999999999888888899887665 332 21 1 123334321 1 2444432 222 2221 3579
Q ss_pred cEEEEcCCCC
Q psy9949 255 DVILDAAGIP 264 (383)
Q Consensus 255 d~v~d~~g~~ 264 (383)
|++|.++|..
T Consensus 82 d~li~~ag~~ 91 (248)
T PRK06123 82 DALVNNAGIL 91 (248)
T ss_pred CEEEECCCCC
Confidence 9999999853
No 439
>PRK13243 glyoxylate reductase; Reviewed
Probab=92.48 E-value=0.71 Score=43.18 Aligned_cols=88 Identities=13% Similarity=0.185 Sum_probs=55.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc-
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD- 266 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~- 266 (383)
.|++|.|.| .|.+|..+++.++.+|++|++.++..+.......+.. +. ++.+.+ ...|+|+-+......
T Consensus 149 ~gktvgIiG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~----~~--~l~ell---~~aDiV~l~lP~t~~T 218 (333)
T PRK13243 149 YGKTIGIIG-FGRIGQAVARRAKGFGMRILYYSRTRKPEAEKELGAE----YR--PLEELL---RESDFVSLHVPLTKET 218 (333)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCChhhHHHcCCE----ec--CHHHHH---hhCCEEEEeCCCChHH
Confidence 578999999 8999999999999999999988865433333334432 11 122222 246888777764321
Q ss_pred ---cccccccccccCCCceEEEec
Q psy9949 267 ---QINSYLPFLKTGKFSKFVTLR 287 (383)
Q Consensus 267 ---~~~~~~~~l~~~~~G~~v~~~ 287 (383)
.....++.++ ++..+|.++
T Consensus 219 ~~~i~~~~~~~mk--~ga~lIN~a 240 (333)
T PRK13243 219 YHMINEERLKLMK--PTAILVNTA 240 (333)
T ss_pred hhccCHHHHhcCC--CCeEEEECc
Confidence 1111256666 777777663
No 440
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=92.45 E-value=0.42 Score=45.01 Aligned_cols=74 Identities=12% Similarity=0.203 Sum_probs=44.7
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCchH---HHHHhc--CCC-ee--eeCCChHHHHHHhcCCCccEEEEc
Q psy9949 190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGDAK---DLVTSL--NPN-LV--IDYNEPEAMHSIAGAGPYDVILDA 260 (383)
Q Consensus 190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~~~---~~~~~l--g~~-~v--~~~~~~~~~~~i~~~~g~d~v~d~ 260 (383)
.+|||+||+|.+|..+++.+...|.+++++. +.++. ...... +.. .. .|..+.+...++.+..++|+||.+
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~ 81 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHL 81 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEEC
Confidence 3799999999999999999999998655444 33221 111111 111 11 244443333333333469999999
Q ss_pred CCC
Q psy9949 261 AGI 263 (383)
Q Consensus 261 ~g~ 263 (383)
++.
T Consensus 82 A~~ 84 (355)
T PRK10217 82 AAE 84 (355)
T ss_pred Ccc
Confidence 875
No 441
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.44 E-value=1.1 Score=40.64 Aligned_cols=76 Identities=21% Similarity=0.183 Sum_probs=56.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD 266 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~ 266 (383)
-.|++|+|.|.+.-+|.=+..|+...|++|+..-+. ..++.+.+ ...|+++-++|.+..
T Consensus 154 l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~------------------T~~l~~~~---~~ADIvI~AvG~p~~ 212 (282)
T PRK14169 154 VAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSK------------------TRNLKQLT---KEADILVVAVGVPHF 212 (282)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCC------------------CCCHHHHH---hhCCEEEEccCCcCc
Confidence 378999999999999999999999889988765432 11222222 247999999999886
Q ss_pred cccccccccccCCCceEEEecC
Q psy9949 267 QINSYLPFLKTGKFSKFVTLRS 288 (383)
Q Consensus 267 ~~~~~~~~l~~~~~G~~v~~~~ 288 (383)
.. -+.++ ++..++++|-
T Consensus 213 i~---~~~vk--~GavVIDvGi 229 (282)
T PRK14169 213 IG---ADAVK--PGAVVIDVGI 229 (282)
T ss_pred cC---HHHcC--CCcEEEEeec
Confidence 33 46778 8888888864
No 442
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.38 E-value=1.2 Score=40.39 Aligned_cols=94 Identities=16% Similarity=0.103 Sum_probs=64.1
Q ss_pred hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHH
Q psy9949 165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEA 244 (383)
Q Consensus 165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~ 244 (383)
.||+.......|. .-+++ -.|++|+|.|.+.-+|.-++.++...|++|+...+.. .++
T Consensus 144 ~PcTp~av~~ll~-~~~i~---l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T------------------~~l 201 (287)
T PRK14176 144 VPCTPHGVIRALE-EYGVD---IEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFT------------------DDL 201 (287)
T ss_pred CCCcHHHHHHHHH-HcCCC---CCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccC------------------CCH
Confidence 4454444444444 22331 3799999999877799999999999999887766321 112
Q ss_pred HHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949 245 MHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS 288 (383)
Q Consensus 245 ~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~ 288 (383)
.+.+ ..+|++|.++|.+... . -+.++ ++..++++|.
T Consensus 202 ~~~~---~~ADIvv~AvG~p~~i-~--~~~vk--~gavVIDvGi 237 (287)
T PRK14176 202 KKYT---LDADILVVATGVKHLI-K--ADMVK--EGAVIFDVGI 237 (287)
T ss_pred HHHH---hhCCEEEEccCCcccc-C--HHHcC--CCcEEEEecc
Confidence 2211 3589999999998754 3 56778 8888888864
No 443
>PLN02583 cinnamoyl-CoA reductase
Probab=92.32 E-value=1 Score=41.34 Aligned_cols=36 Identities=31% Similarity=0.269 Sum_probs=32.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG 222 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~ 222 (383)
.++++|+|+||+|.+|..++..+...|.+|++++++
T Consensus 4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~ 39 (297)
T PLN02583 4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQK 39 (297)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcC
Confidence 456789999999999999999999999999999864
No 444
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.31 E-value=1 Score=40.82 Aligned_cols=94 Identities=21% Similarity=0.116 Sum_probs=63.8
Q ss_pred hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHH
Q psy9949 165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEA 244 (383)
Q Consensus 165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~ 244 (383)
+||+.......|. .-++. -.|++|+|.|.+.-+|.=+..++...++.|+..-+. ..++
T Consensus 135 ~PcTp~avi~lL~-~~~i~---l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~------------------T~~l 192 (287)
T PRK14173 135 EPCTPAGVVRLLK-HYGIP---LAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSK------------------TQDL 192 (287)
T ss_pred CCCCHHHHHHHHH-HcCCC---CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCC------------------CCCH
Confidence 3444443444444 33331 378999999999999999999999889988765432 1122
Q ss_pred HHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949 245 MHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS 288 (383)
Q Consensus 245 ~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~ 288 (383)
.+.+ ...|+++-++|.+... . -+.++ ++..++++|-
T Consensus 193 ~~~~---~~ADIvIsAvGkp~~i-~--~~~vk--~GavVIDVGi 228 (287)
T PRK14173 193 PAVT---RRADVLVVAVGRPHLI-T--PEMVR--PGAVVVDVGI 228 (287)
T ss_pred HHHH---hhCCEEEEecCCcCcc-C--HHHcC--CCCEEEEccC
Confidence 2222 2489999999988754 3 56778 8888888864
No 445
>KOG1610|consensus
Probab=92.24 E-value=4.9 Score=36.72 Aligned_cols=77 Identities=23% Similarity=0.414 Sum_probs=49.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHH-Hhc--CC--CeeeeCCChHHHHH----Hh---cCCC
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLV-TSL--NP--NLVIDYNEPEAMHS----IA---GAGP 253 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~-~~l--g~--~~v~~~~~~~~~~~----i~---~~~g 253 (383)
-.++.|+|+|..+|.|..++.-+...|.+|++.|-. +..+.+ .+. +- +--+|...++.... ++ ...+
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g 106 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG 106 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence 456789999999999999999999999999999933 332222 222 11 11245444332222 22 2246
Q ss_pred ccEEEEcCCC
Q psy9949 254 YDVILDAAGI 263 (383)
Q Consensus 254 ~d~v~d~~g~ 263 (383)
.-.+++++|.
T Consensus 107 LwglVNNAGi 116 (322)
T KOG1610|consen 107 LWGLVNNAGI 116 (322)
T ss_pred ceeEEecccc
Confidence 8889999984
No 446
>PLN02427 UDP-apiose/xylose synthase
Probab=92.19 E-value=0.75 Score=43.95 Aligned_cols=74 Identities=14% Similarity=0.170 Sum_probs=45.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecCc-hHHHHHhcC-------CCee-eeCCChHHHHHHhcCCCccEE
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSGD-AKDLVTSLN-------PNLV-IDYNEPEAMHSIAGAGPYDVI 257 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~~-~~~~~~~lg-------~~~v-~~~~~~~~~~~i~~~~g~d~v 257 (383)
+..+|||+||+|-+|..+++.+... |.+|+++++.. +...+...+ ...+ .|..+......+ ..++|+|
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~--~~~~d~V 90 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGL--IKMADLT 90 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHH--hhcCCEE
Confidence 3457999999999999998888877 57999998543 322222221 1111 233332222222 2369999
Q ss_pred EEcCCC
Q psy9949 258 LDAAGI 263 (383)
Q Consensus 258 ~d~~g~ 263 (383)
|.+++.
T Consensus 91 iHlAa~ 96 (386)
T PLN02427 91 INLAAI 96 (386)
T ss_pred EEcccc
Confidence 999873
No 447
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=92.13 E-value=1.6 Score=37.15 Aligned_cols=95 Identities=14% Similarity=0.097 Sum_probs=62.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCC--hHHHHHHhcC-CCccEEEEcCCC
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNE--PEAMHSIAGA-GPYDVILDAAGI 263 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~--~~~~~~i~~~-~g~d~v~d~~g~ 263 (383)
-.|++|+|.|.+.-+|.=+..++...||+|+....+.-..+.+.-... .... .+..+++.+. ...|+|+-++|.
T Consensus 60 l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~~~~~~~~~---hs~t~~~~~~~~l~~~~~~ADIVIsAvG~ 136 (197)
T cd01079 60 LYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQVFTRGESIR---HEKHHVTDEEAMTLDCLSQSDVVITGVPS 136 (197)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccccccccccc---cccccccchhhHHHHHhhhCCEEEEccCC
Confidence 378999999999999999999999999999977533211111100000 0111 1211223322 469999999999
Q ss_pred CcccccccccccccCCCceEEEecC
Q psy9949 264 PLDQINSYLPFLKTGKFSKFVTLRS 288 (383)
Q Consensus 264 ~~~~~~~~~~~l~~~~~G~~v~~~~ 288 (383)
+..... -+.++ ++..+|++|.
T Consensus 137 ~~~~i~--~d~ik--~GavVIDVGi 157 (197)
T cd01079 137 PNYKVP--TELLK--DGAICINFAS 157 (197)
T ss_pred CCCccC--HHHcC--CCcEEEEcCC
Confidence 886333 56888 9999999864
No 448
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=91.95 E-value=0.65 Score=47.98 Aligned_cols=77 Identities=19% Similarity=0.178 Sum_probs=48.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecCc---hHHHHHhc----CCCee-eeCCChHHHHHHhcCCCccEE
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAW--DIEVVTTCSGD---AKDLVTSL----NPNLV-IDYNEPEAMHSIAGAGPYDVI 257 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~--G~~Vi~~~~~~---~~~~~~~l----g~~~v-~~~~~~~~~~~i~~~~g~d~v 257 (383)
++++|||+||+|-+|..++..+... +.+|+++++.. +...+... +...+ .|..+.+....+....++|+|
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~V 84 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTI 84 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEE
Confidence 4679999999999999988888766 57898887532 22211111 12111 244444444444334589999
Q ss_pred EEcCCCC
Q psy9949 258 LDAAGIP 264 (383)
Q Consensus 258 ~d~~g~~ 264 (383)
|++++..
T Consensus 85 iHlAa~~ 91 (668)
T PLN02260 85 MHFAAQT 91 (668)
T ss_pred EECCCcc
Confidence 9998853
No 449
>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase. Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.
Probab=91.95 E-value=0.54 Score=43.66 Aligned_cols=96 Identities=20% Similarity=0.201 Sum_probs=57.1
Q ss_pred EEEEEcCCchHHHHHHHHHHHCC----CEEEEEecCch---HHHHHhcCC--------------------CeeeeCCChH
Q psy9949 191 RVLVLGASGGVGTMAVQLLKAWD----IEVVTTCSGDA---KDLVTSLNP--------------------NLVIDYNEPE 243 (383)
Q Consensus 191 ~VlI~ga~g~vG~~ai~la~~~G----~~Vi~~~~~~~---~~~~~~lg~--------------------~~v~~~~~~~ 243 (383)
+|.|.| .|.+|..+.+++...+ .+|.++..-.. ..++.++.- ..+--....+
T Consensus 1 ~IaInG-fGrIGR~vlr~l~e~~~~~~~~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~ 79 (325)
T TIGR01532 1 RVAING-FGRIGRNVLRALYESGERLGIEVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT 79 (325)
T ss_pred CEEEEC-CCHHHHHHHHHHHhcCCCCCeEEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence 478999 6999999999988653 57777763221 223322210 1110010001
Q ss_pred HHHHHhc-CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCc
Q psy9949 244 AMHSIAG-AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFL 291 (383)
Q Consensus 244 ~~~~i~~-~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~ 291 (383)
.+.+.. ..++|+||+|+|.......+ ...++ .+++.|+++.|..
T Consensus 80 -p~~~~w~~~gvDiVie~tG~~~s~e~a-~~~l~--aGa~~V~~SaP~~ 124 (325)
T TIGR01532 80 -PEALPWRALGVDLVLDCTGVYGNREQG-ERHIR--AGAKRVLFSHPGA 124 (325)
T ss_pred -hhhccccccCCCEEEEccchhccHHHH-HHHHH--cCCeEEEecCCCc
Confidence 111111 14899999999988765553 66777 7888888876643
No 450
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=91.94 E-value=0.42 Score=37.38 Aligned_cols=89 Identities=25% Similarity=0.264 Sum_probs=52.8
Q ss_pred EEEEEcCCchHHHHHHHHHHHC-CCEEEEEecCch---HHHHHhcC----CCee-eeCCChHHHHHHhcCCCccEEEEcC
Q psy9949 191 RVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSGDA---KDLVTSLN----PNLV-IDYNEPEAMHSIAGAGPYDVILDAA 261 (383)
Q Consensus 191 ~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~~~---~~~~~~lg----~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~ 261 (383)
+|.|.||+|-+|..+++++... .++++.+++.++ ..+...++ ...+ +...+ .+. ..++|+||.|+
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~Dvvf~a~ 74 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDAD---PEE---LSDVDVVFLAL 74 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETS---GHH---HTTESEEEE-S
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecc---hhH---hhcCCEEEecC
Confidence 5899999999999999988875 457766663322 12222221 2111 21111 111 25799999999
Q ss_pred CCCcccccccccccccCCCceEEEecC
Q psy9949 262 GIPLDQINSYLPFLKTGKFSKFVTLRS 288 (383)
Q Consensus 262 g~~~~~~~~~~~~l~~~~~G~~v~~~~ 288 (383)
++....... -..+. ++-++++.++
T Consensus 75 ~~~~~~~~~-~~~~~--~g~~ViD~s~ 98 (121)
T PF01118_consen 75 PHGASKELA-PKLLK--AGIKVIDLSG 98 (121)
T ss_dssp CHHHHHHHH-HHHHH--TTSEEEESSS
T ss_pred chhHHHHHH-HHHhh--CCcEEEeCCH
Confidence 987664442 34456 6667887643
No 451
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=91.81 E-value=0.99 Score=39.49 Aligned_cols=73 Identities=26% Similarity=0.423 Sum_probs=47.1
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEecCc--hH----HHHHhcCCC-ee--eeCCChHHHHHH----h-cCCCccEE
Q psy9949 192 VLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD--AK----DLVTSLNPN-LV--IDYNEPEAMHSI----A-GAGPYDVI 257 (383)
Q Consensus 192 VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~--~~----~~~~~lg~~-~v--~~~~~~~~~~~i----~-~~~g~d~v 257 (383)
++|+|++|++|..++..+...|++|++++++. +. +...+.+.. .. .|..+....+.+ . ..+++|.+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 58999999999999999988899999998543 21 122333432 12 344443322222 1 12579999
Q ss_pred EEcCCCC
Q psy9949 258 LDAAGIP 264 (383)
Q Consensus 258 ~d~~g~~ 264 (383)
+.++|..
T Consensus 81 i~~ag~~ 87 (239)
T TIGR01830 81 VNNAGIT 87 (239)
T ss_pred EECCCCC
Confidence 9998863
No 452
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.81 E-value=1.3 Score=40.05 Aligned_cols=94 Identities=19% Similarity=0.161 Sum_probs=63.7
Q ss_pred hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHH
Q psy9949 165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEA 244 (383)
Q Consensus 165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~ 244 (383)
+||+.......|. .-++. -.|++|+|.|.+.-+|.=+..++...+++|+..-+. ..++
T Consensus 137 ~PcTp~avi~lL~-~~~i~---l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~------------------T~~l 194 (284)
T PRK14170 137 VPCTPAGIIELIK-STGTQ---IEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSR------------------TKDL 194 (284)
T ss_pred CCCCHHHHHHHHH-HhCCC---CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC------------------CCCH
Confidence 3444443444444 33331 378999999999999999999999889988765432 1122
Q ss_pred HHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949 245 MHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS 288 (383)
Q Consensus 245 ~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~ 288 (383)
.+.+ ...|+++-++|.+.... -+.++ ++..++++|.
T Consensus 195 ~~~~---~~ADIvI~AvG~~~~i~---~~~vk--~GavVIDvGi 230 (284)
T PRK14170 195 PQVA---KEADILVVATGLAKFVK---KDYIK--PGAIVIDVGM 230 (284)
T ss_pred HHHH---hhCCEEEEecCCcCccC---HHHcC--CCCEEEEccC
Confidence 2222 24799999999888633 46778 8888888864
No 453
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=91.80 E-value=0.65 Score=32.67 Aligned_cols=35 Identities=26% Similarity=0.321 Sum_probs=23.6
Q ss_pred CCCCEEEEEcCCchHHHHH-HHHHHHCCCEEEEEec
Q psy9949 187 PRDKRVLVLGASGGVGTMA-VQLLKAWDIEVVTTCS 221 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~a-i~la~~~G~~Vi~~~~ 221 (383)
+..++|||+|++++.|++. |.+|-..|++.+.+.-
T Consensus 37 ~GpK~VLViGaStGyGLAsRIa~aFg~gA~TiGV~f 72 (78)
T PF12242_consen 37 NGPKKVLVIGASTGYGLASRIAAAFGAGADTIGVSF 72 (78)
T ss_dssp TS-SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE-
T ss_pred CCCceEEEEecCCcccHHHHHHHHhcCCCCEEEEee
Confidence 4458999999999999986 4444467888888874
No 454
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.77 E-value=1.5 Score=40.09 Aligned_cols=93 Identities=20% Similarity=0.135 Sum_probs=62.3
Q ss_pred hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHH
Q psy9949 165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEA 244 (383)
Q Consensus 165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~ 244 (383)
+||+.......|.+ -+++ -.|++|.|.|.++.+|.-++.++...|++|++..+..+ +.
T Consensus 139 ~PcTp~aii~lL~~-~~i~---l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~------------------~l 196 (301)
T PRK14194 139 TPCTPSGCLRLLED-TCGD---LTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST------------------DA 196 (301)
T ss_pred CCCcHHHHHHHHHH-hCCC---CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC------------------CH
Confidence 34544444444442 2331 37899999997779999999999999999988764321 11
Q ss_pred HHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEec
Q psy9949 245 MHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLR 287 (383)
Q Consensus 245 ~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~ 287 (383)
.+.. ...|+|+-++|.+..... ..++ ++..++++|
T Consensus 197 ~e~~---~~ADIVIsavg~~~~v~~---~~ik--~GaiVIDvg 231 (301)
T PRK14194 197 KALC---RQADIVVAAVGRPRLIDA---DWLK--PGAVVIDVG 231 (301)
T ss_pred HHHH---hcCCEEEEecCChhcccH---hhcc--CCcEEEEec
Confidence 2211 257999999998865443 3467 888888886
No 455
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=91.76 E-value=0.71 Score=41.34 Aligned_cols=71 Identities=21% Similarity=0.203 Sum_probs=46.4
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeee-eCCC-hHHHHHHhcCCCccEEEEcCCC
Q psy9949 191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVI-DYNE-PEAMHSIAGAGPYDVILDAAGI 263 (383)
Q Consensus 191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~-~~~~-~~~~~~i~~~~g~d~v~d~~g~ 263 (383)
+|||.||+|- |..++..+...|.+|++++.++ ..+.+...|...+. ..-+ .++. ......++|+|+|++.-
T Consensus 2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~-~~l~~~~i~~VIDAtHP 75 (256)
T TIGR00715 2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELR-EFLKRHSIDILVDATHP 75 (256)
T ss_pred eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccCCceEEECCCCHHHHH-HHHHhcCCCEEEEcCCH
Confidence 6899997775 9888877777899999998665 44555555554443 2212 2222 22234679999998754
No 456
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.75 E-value=1.4 Score=39.87 Aligned_cols=76 Identities=18% Similarity=0.162 Sum_probs=57.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD 266 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~ 266 (383)
-.|++|+|.|.+.-+|.=+..++...|+.|+..-+. ..++.+.. ...|+++-++|.+..
T Consensus 157 l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~------------------T~~l~~~~---~~ADIvIsAvGk~~~ 215 (284)
T PRK14177 157 VTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSK------------------TQNLPSIV---RQADIIVGAVGKPEF 215 (284)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC------------------CCCHHHHH---hhCCEEEEeCCCcCc
Confidence 379999999999999999999999999988866532 11222221 258999999998876
Q ss_pred cccccccccccCCCceEEEecC
Q psy9949 267 QINSYLPFLKTGKFSKFVTLRS 288 (383)
Q Consensus 267 ~~~~~~~~l~~~~~G~~v~~~~ 288 (383)
.. -+.++ ++..++++|-
T Consensus 216 i~---~~~ik--~gavVIDvGi 232 (284)
T PRK14177 216 IK---ADWIS--EGAVLLDAGY 232 (284)
T ss_pred cC---HHHcC--CCCEEEEecC
Confidence 33 46788 8888888864
No 457
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=91.70 E-value=0.13 Score=38.97 Aligned_cols=85 Identities=20% Similarity=0.182 Sum_probs=54.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCccc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQ 267 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~ 267 (383)
++++|||.| +|.+|..-++.+...|++|++++... +..+ +.-... ...+. .+..++++||-+++.+...
T Consensus 6 ~~~~vlVvG-gG~va~~k~~~Ll~~gA~v~vis~~~--~~~~--~~i~~~---~~~~~---~~l~~~~lV~~at~d~~~n 74 (103)
T PF13241_consen 6 KGKRVLVVG-GGPVAARKARLLLEAGAKVTVISPEI--EFSE--GLIQLI---RREFE---EDLDGADLVFAATDDPELN 74 (103)
T ss_dssp TT-EEEEEE-ESHHHHHHHHHHCCCTBEEEEEESSE--HHHH--TSCEEE---ESS-G---GGCTTESEEEE-SS-HHHH
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCch--hhhh--hHHHHH---hhhHH---HHHhhheEEEecCCCHHHH
Confidence 678999999 79999999999999999999999764 2112 111111 11122 1245799999999887664
Q ss_pred ccccccccccCCCceEEEe
Q psy9949 268 INSYLPFLKTGKFSKFVTL 286 (383)
Q Consensus 268 ~~~~~~~l~~~~~G~~v~~ 286 (383)
.. +.+..+ ..|.++.+
T Consensus 75 ~~-i~~~a~--~~~i~vn~ 90 (103)
T PF13241_consen 75 EA-IYADAR--ARGILVNV 90 (103)
T ss_dssp HH-HHHHHH--HTTSEEEE
T ss_pred HH-HHHHHh--hCCEEEEE
Confidence 44 133344 57788776
No 458
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.68 E-value=1.5 Score=39.69 Aligned_cols=76 Identities=22% Similarity=0.187 Sum_probs=56.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD 266 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~ 266 (383)
-.|++|+|.|.+.-+|.=+..++...|++|+..-+. ..++.+.. ...|+++-++|.+..
T Consensus 156 l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~------------------T~~l~~~~---~~ADIvIsAvGkp~~ 214 (278)
T PRK14172 156 IEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSK------------------TKNLKEVC---KKADILVVAIGRPKF 214 (278)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCC------------------CCCHHHHH---hhCCEEEEcCCCcCc
Confidence 379999999999999999999999889988766532 11222221 248999999999886
Q ss_pred cccccccccccCCCceEEEecC
Q psy9949 267 QINSYLPFLKTGKFSKFVTLRS 288 (383)
Q Consensus 267 ~~~~~~~~l~~~~~G~~v~~~~ 288 (383)
.. -+.++ ++..++++|-
T Consensus 215 i~---~~~ik--~gavVIDvGi 231 (278)
T PRK14172 215 ID---EEYVK--EGAIVIDVGT 231 (278)
T ss_pred cC---HHHcC--CCcEEEEeec
Confidence 33 46788 8888888853
No 459
>KOG4169|consensus
Probab=91.64 E-value=0.71 Score=40.02 Aligned_cols=76 Identities=25% Similarity=0.385 Sum_probs=49.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCchHHHHHh----cCCCee--eeCCCh---HHH----HHHhcCCC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGDAKDLVTS----LNPNLV--IDYNEP---EAM----HSIAGAGP 253 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~~~~~~~~----lg~~~v--~~~~~~---~~~----~~i~~~~g 253 (383)
.|+++++.|++|++|+.....+...|+++.++. +.|+.+...+ .....+ +.++-. +.. +.....+-
T Consensus 4 tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~ 83 (261)
T KOG4169|consen 4 TGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGT 83 (261)
T ss_pred cCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCc
Confidence 489999999999999999999999999888888 4454332222 222233 222221 222 22223467
Q ss_pred ccEEEEcCCC
Q psy9949 254 YDVILDAAGI 263 (383)
Q Consensus 254 ~d~v~d~~g~ 263 (383)
.|+.++.+|-
T Consensus 84 iDIlINgAGi 93 (261)
T KOG4169|consen 84 IDILINGAGI 93 (261)
T ss_pred eEEEEccccc
Confidence 9999998885
No 460
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.62 E-value=1.5 Score=39.70 Aligned_cols=94 Identities=19% Similarity=0.093 Sum_probs=63.9
Q ss_pred hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHH
Q psy9949 165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEA 244 (383)
Q Consensus 165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~ 244 (383)
+||+....+..|.. -++. -.|++|+|.|.+.-+|.=+..++...++.|+..-+.. .++
T Consensus 137 ~PcTp~avi~lL~~-y~i~---l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T------------------~nl 194 (282)
T PRK14166 137 LPCTPLGVMKLLKA-YEID---LEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT------------------KDL 194 (282)
T ss_pred cCCCHHHHHHHHHH-hCCC---CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC------------------CCH
Confidence 44554444444542 2321 3799999999999999999999988898888554321 112
Q ss_pred HHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949 245 MHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS 288 (383)
Q Consensus 245 ~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~ 288 (383)
.+.. ...|+++-++|.+.... -+.++ ++..++++|-
T Consensus 195 ~~~~---~~ADIvIsAvGkp~~i~---~~~vk--~GavVIDvGi 230 (282)
T PRK14166 195 SLYT---RQADLIIVAAGCVNLLR---SDMVK--EGVIVVDVGI 230 (282)
T ss_pred HHHH---hhCCEEEEcCCCcCccC---HHHcC--CCCEEEEecc
Confidence 2221 25899999999988633 45778 8888888863
No 461
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=91.58 E-value=1.3 Score=37.35 Aligned_cols=74 Identities=24% Similarity=0.383 Sum_probs=41.5
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-c----hH---HHHHhcCCCee---eeCCChHHHHHHh-c----CCC
Q psy9949 191 RVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-D----AK---DLVTSLNPNLV---IDYNEPEAMHSIA-G----AGP 253 (383)
Q Consensus 191 ~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~----~~---~~~~~lg~~~v---~~~~~~~~~~~i~-~----~~g 253 (383)
++||+|+.|++|+.+++.+...++ +++.+.++ . .. +.+++.|..-. .|..+.+-...+. . .+.
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 689999999999999998888877 88888866 1 12 23345565311 2444433333322 2 136
Q ss_pred ccEEEEcCCCC
Q psy9949 254 YDVILDAAGIP 264 (383)
Q Consensus 254 ~d~v~d~~g~~ 264 (383)
++.||.++|..
T Consensus 82 i~gVih~ag~~ 92 (181)
T PF08659_consen 82 IDGVIHAAGVL 92 (181)
T ss_dssp EEEEEE-----
T ss_pred cceeeeeeeee
Confidence 78899888763
No 462
>PLN00203 glutamyl-tRNA reductase
Probab=91.48 E-value=1.1 Score=44.56 Aligned_cols=72 Identities=21% Similarity=0.299 Sum_probs=48.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc-hH-HHHHhcCCCee--eeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949 189 DKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD-AK-DLVTSLNPNLV--IDYNEPEAMHSIAGAGPYDVILDAAGI 263 (383)
Q Consensus 189 ~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~-~~-~~~~~lg~~~v--~~~~~~~~~~~i~~~~g~d~v~d~~g~ 263 (383)
+.+|+|.| +|.+|.+++..+...|+ +|+++.++. +. .++..++...+ .... +..+. ..+.|+||.|++.
T Consensus 266 ~kkVlVIG-AG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~--dl~~a---l~~aDVVIsAT~s 339 (519)
T PLN00203 266 SARVLVIG-AGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLD--EMLAC---AAEADVVFTSTSS 339 (519)
T ss_pred CCEEEEEe-CHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHh--hHHHH---HhcCCEEEEccCC
Confidence 67899999 79999999999999998 788888664 33 45555542211 1111 12222 2479999999887
Q ss_pred Ccc
Q psy9949 264 PLD 266 (383)
Q Consensus 264 ~~~ 266 (383)
+..
T Consensus 340 ~~p 342 (519)
T PLN00203 340 ETP 342 (519)
T ss_pred CCC
Confidence 653
No 463
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=91.43 E-value=1.9 Score=39.27 Aligned_cols=94 Identities=18% Similarity=0.142 Sum_probs=62.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhc-CCC-eeeeCCChHHHHHHhcCCCccEEEEcCC--
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSL-NPN-LVIDYNEPEAMHSIAGAGPYDVILDAAG-- 262 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~l-g~~-~v~~~~~~~~~~~i~~~~g~d~v~d~~g-- 262 (383)
+..+|.|+| .|-+|.-++.+|..+|++|...+.+ +|+..+..+ +.. .+.-++..++.+.++ ..|++|.++=
T Consensus 167 ~~~kv~iiG-GGvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~---~aDlvIgaVLIp 242 (371)
T COG0686 167 LPAKVVVLG-GGVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVK---KADLVIGAVLIP 242 (371)
T ss_pred CCccEEEEC-CccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhh---hccEEEEEEEec
Confidence 345688888 7999999999999999999999954 677666553 333 334444455555543 5888887642
Q ss_pred CC---cccccccccccccCCCceEEEec
Q psy9949 263 IP---LDQINSYLPFLKTGKFSKFVTLR 287 (383)
Q Consensus 263 ~~---~~~~~~~~~~l~~~~~G~~v~~~ 287 (383)
+. ......+.+.|+ |++.+|++.
T Consensus 243 gakaPkLvt~e~vk~Mk--pGsVivDVA 268 (371)
T COG0686 243 GAKAPKLVTREMVKQMK--PGSVIVDVA 268 (371)
T ss_pred CCCCceehhHHHHHhcC--CCcEEEEEE
Confidence 21 111122267788 898888873
No 464
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=91.37 E-value=0.9 Score=44.41 Aligned_cols=70 Identities=24% Similarity=0.377 Sum_probs=47.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH------HHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK------DLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAA 261 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~------~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~ 261 (383)
.+++|+|.| +|.+|..++..+...|++|++++..... +.+.+.|.. ++..+..+ . ..+++|+||.++
T Consensus 4 ~~k~v~iiG-~g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~-~~~~~~~~---~--~~~~~d~vv~~~ 76 (450)
T PRK14106 4 KGKKVLVVG-AGVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIE-LVLGEYPE---E--FLEGVDLVVVSP 76 (450)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCE-EEeCCcch---h--HhhcCCEEEECC
Confidence 468899999 6779999999999999999999865321 223344544 32222221 1 124699999998
Q ss_pred CCC
Q psy9949 262 GIP 264 (383)
Q Consensus 262 g~~ 264 (383)
|..
T Consensus 77 g~~ 79 (450)
T PRK14106 77 GVP 79 (450)
T ss_pred CCC
Confidence 864
No 465
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.24 E-value=1.7 Score=39.62 Aligned_cols=76 Identities=22% Similarity=0.223 Sum_probs=57.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD 266 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~ 266 (383)
-.|++|+|.|.+.-+|.=+..|+...+++|+..-+.. .++.+.+ ...|+++-++|.+..
T Consensus 158 l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T------------------~~l~~~~---~~ADIvVsAvGkp~~ 216 (294)
T PRK14187 158 LSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSAT------------------RDLADYC---SKADILVAAVGIPNF 216 (294)
T ss_pred CCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCC------------------CCHHHHH---hhCCEEEEccCCcCc
Confidence 3789999999999999999999999999888665421 1122211 258999999998876
Q ss_pred cccccccccccCCCceEEEecC
Q psy9949 267 QINSYLPFLKTGKFSKFVTLRS 288 (383)
Q Consensus 267 ~~~~~~~~l~~~~~G~~v~~~~ 288 (383)
.. -+.++ ++..++++|-
T Consensus 217 i~---~~~ik--~gaiVIDVGi 233 (294)
T PRK14187 217 VK---YSWIK--KGAIVIDVGI 233 (294)
T ss_pred cC---HHHcC--CCCEEEEecc
Confidence 33 45777 8888888864
No 466
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=91.22 E-value=1.5 Score=39.99 Aligned_cols=94 Identities=20% Similarity=0.215 Sum_probs=64.1
Q ss_pred hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHH
Q psy9949 165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEA 244 (383)
Q Consensus 165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~ 244 (383)
+||+.......|.. -++. -.|++|+|.|-+.-+|.=+..|+...|++|+..-+. ..++
T Consensus 147 ~PcTp~avi~lL~~-~~i~---l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~------------------T~nl 204 (299)
T PLN02516 147 LPCTPKGCLELLSR-SGIP---IKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSR------------------TPDP 204 (299)
T ss_pred CCCCHHHHHHHHHH-hCCC---CCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCC------------------CCCH
Confidence 44554444444542 2331 379999999999999999999999889988877542 1112
Q ss_pred HHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949 245 MHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS 288 (383)
Q Consensus 245 ~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~ 288 (383)
.+.+ ...|+++-++|.+.... -+.++ ++..++++|-
T Consensus 205 ~~~~---~~ADIvv~AvGk~~~i~---~~~vk--~gavVIDvGi 240 (299)
T PLN02516 205 ESIV---READIVIAAAGQAMMIK---GDWIK--PGAAVIDVGT 240 (299)
T ss_pred HHHH---hhCCEEEEcCCCcCccC---HHHcC--CCCEEEEeec
Confidence 2222 25799999999875432 46788 8888888864
No 467
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=91.21 E-value=0.9 Score=39.76 Aligned_cols=90 Identities=22% Similarity=0.304 Sum_probs=56.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCchHHHHHh----cCCCeeeeCCChHHHHHHhcC-CCccEEEEc-
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGDAKDLVTS----LNPNLVIDYNEPEAMHSIAGA-GPYDVILDA- 260 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~~~~~~~~----lg~~~v~~~~~~~~~~~i~~~-~g~d~v~d~- 260 (383)
+|.+||=.|..| |.+..-+|+. |++|++++ +.+..+.++. -|.. ++|.... .+++... +.||+|+..
T Consensus 59 ~g~~vLDvGCGg--G~Lse~mAr~-Ga~VtgiD~se~~I~~Ak~ha~e~gv~--i~y~~~~-~edl~~~~~~FDvV~cmE 132 (243)
T COG2227 59 PGLRVLDVGCGG--GILSEPLARL-GASVTGIDASEKPIEVAKLHALESGVN--IDYRQAT-VEDLASAGGQFDVVTCME 132 (243)
T ss_pred CCCeEEEecCCc--cHhhHHHHHC-CCeeEEecCChHHHHHHHHhhhhcccc--ccchhhh-HHHHHhcCCCccEEEEhh
Confidence 778899888433 5666666654 79999999 4455565542 2222 4565543 3444443 679998863
Q ss_pred ----CCCCcccccccccccccCCCceEEE
Q psy9949 261 ----AGIPLDQINSYLPFLKTGKFSKFVT 285 (383)
Q Consensus 261 ----~g~~~~~~~~~~~~l~~~~~G~~v~ 285 (383)
+..+.....++.+.++ |+|.++.
T Consensus 133 VlEHv~dp~~~~~~c~~lvk--P~G~lf~ 159 (243)
T COG2227 133 VLEHVPDPESFLRACAKLVK--PGGILFL 159 (243)
T ss_pred HHHccCCHHHHHHHHHHHcC--CCcEEEE
Confidence 3444433333378889 9998875
No 468
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.20 E-value=1.7 Score=39.28 Aligned_cols=94 Identities=19% Similarity=0.114 Sum_probs=63.9
Q ss_pred hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHH
Q psy9949 165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEA 244 (383)
Q Consensus 165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~ 244 (383)
+||+....+..|... ++. -.|++|+|.|.+.-+|.=++.++...||+|+..-+.. .++
T Consensus 138 ~PcTp~aii~lL~~y-~i~---l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T------------------~dl 195 (282)
T PRK14180 138 ESCTPKGIMTMLREY-GIK---TEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT------------------TDL 195 (282)
T ss_pred CCCCHHHHHHHHHHh-CCC---CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCC------------------CCH
Confidence 445444444445432 221 3799999999999999999999998899886654321 112
Q ss_pred HHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949 245 MHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS 288 (383)
Q Consensus 245 ~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~ 288 (383)
.+.+ ...|+++-++|.+.... -+.++ ++..++++|-
T Consensus 196 ~~~~---k~ADIvIsAvGkp~~i~---~~~vk--~gavVIDvGi 231 (282)
T PRK14180 196 KSHT---TKADILIVAVGKPNFIT---ADMVK--EGAVVIDVGI 231 (282)
T ss_pred HHHh---hhcCEEEEccCCcCcCC---HHHcC--CCcEEEEecc
Confidence 2111 25899999999988633 46778 8888888864
No 469
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=91.10 E-value=1.2 Score=44.57 Aligned_cols=88 Identities=16% Similarity=0.147 Sum_probs=56.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc-
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD- 266 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~- 266 (383)
.|++|.|.| .|.+|...++.++.+|++|++.++....+....+|...+ ++.+-+ ...|+|+-+......
T Consensus 139 ~gktvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~------~l~ell---~~aDiV~l~lP~t~~t 208 (526)
T PRK13581 139 YGKTLGIIG-LGRIGSEVAKRAKAFGMKVIAYDPYISPERAAQLGVELV------SLDELL---ARADFITLHTPLTPET 208 (526)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCChhHHHhcCCEEE------cHHHHH---hhCCEEEEccCCChHh
Confidence 478999999 999999999999999999999986433333344554322 122222 246777777664321
Q ss_pred ---cccccccccccCCCceEEEec
Q psy9949 267 ---QINSYLPFLKTGKFSKFVTLR 287 (383)
Q Consensus 267 ---~~~~~~~~l~~~~~G~~v~~~ 287 (383)
.....++.++ ++..+|.++
T Consensus 209 ~~li~~~~l~~mk--~ga~lIN~a 230 (526)
T PRK13581 209 RGLIGAEELAKMK--PGVRIINCA 230 (526)
T ss_pred hcCcCHHHHhcCC--CCeEEEECC
Confidence 1111255666 777777664
No 470
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=91.02 E-value=1.1 Score=35.17 Aligned_cols=89 Identities=21% Similarity=0.225 Sum_probs=47.2
Q ss_pred EEEEEcCCchHHHHHHHHHHH-CCCEEEEEe-cCch----HHHHH--hcCCCeeeeCCChHHHHHHhcCCCccEEEEcCC
Q psy9949 191 RVLVLGASGGVGTMAVQLLKA-WDIEVVTTC-SGDA----KDLVT--SLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAG 262 (383)
Q Consensus 191 ~VlI~ga~g~vG~~ai~la~~-~G~~Vi~~~-~~~~----~~~~~--~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g 262 (383)
+|.|+|..|-+|..+++.+.. .+.++.+.. ++.. .+... ..+...+..++ ++. .+.+ .+|+++|++.
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~--~l~-~~~~--~~DVvIDfT~ 76 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTD--DLE-ELLE--EADVVIDFTN 76 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS---HH-HHTT--H-SEEEEES-
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccch--hHH-Hhcc--cCCEEEEcCC
Confidence 689999779999999999998 567877776 4331 11111 11111111121 222 2222 2999999994
Q ss_pred CCcccccccccccccCCCceEEEecC
Q psy9949 263 IPLDQINSYLPFLKTGKFSKFVTLRS 288 (383)
Q Consensus 263 ~~~~~~~~~~~~l~~~~~G~~v~~~~ 288 (383)
....... ++... +.|.-+.+|.
T Consensus 77 p~~~~~~--~~~~~--~~g~~~ViGT 98 (124)
T PF01113_consen 77 PDAVYDN--LEYAL--KHGVPLVIGT 98 (124)
T ss_dssp HHHHHHH--HHHHH--HHT-EEEEE-
T ss_pred hHHhHHH--HHHHH--hCCCCEEEEC
Confidence 3333333 44444 4465555543
No 471
>PRK07340 ornithine cyclodeaminase; Validated
Probab=90.97 E-value=3.8 Score=37.80 Aligned_cols=91 Identities=8% Similarity=0.004 Sum_probs=57.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHH-HCCC-EEEEEecCc-h-HHHHHhcCCC--eeeeCCChHHHHHHhcCCCccEEEEc
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLK-AWDI-EVVTTCSGD-A-KDLVTSLNPN--LVIDYNEPEAMHSIAGAGPYDVILDA 260 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~-~~G~-~Vi~~~~~~-~-~~~~~~lg~~--~v~~~~~~~~~~~i~~~~g~d~v~d~ 260 (383)
....+++|.| +|..|.+.+..+. ..+. +|.+..++. + .+++.++... .+. . .+..+.+ .+.|+|+.|
T Consensus 123 ~~~~~v~IiG-aG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~--~~~~~av---~~aDiVita 195 (304)
T PRK07340 123 APPGDLLLIG-TGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P--LDGEAIP---EAVDLVVTA 195 (304)
T ss_pred CCCCEEEEEC-CcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E--CCHHHHh---hcCCEEEEc
Confidence 4567899999 8999998888876 4676 566666553 3 2455555321 111 1 1222222 479999999
Q ss_pred CCCCcccccccccccccCCCceEEEecCC
Q psy9949 261 AGIPLDQINSYLPFLKTGKFSKFVTLRSP 289 (383)
Q Consensus 261 ~g~~~~~~~~~~~~l~~~~~G~~v~~~~~ 289 (383)
+.+..-... . .++ ++-++..+|++
T Consensus 196 T~s~~Pl~~--~-~~~--~g~hi~~iGs~ 219 (304)
T PRK07340 196 TTSRTPVYP--E-AAR--AGRLVVAVGAF 219 (304)
T ss_pred cCCCCceeC--c-cCC--CCCEEEecCCC
Confidence 987764333 2 356 77777777654
No 472
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=90.94 E-value=1.1 Score=44.12 Aligned_cols=70 Identities=20% Similarity=0.256 Sum_probs=48.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch------HHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA------KDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAA 261 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~------~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~ 261 (383)
.+++|+|.| .|.+|+.++.+++..|.+|++++..+. .+.+++.|.......... ...++|.|+.+.
T Consensus 15 ~~~~v~viG-~G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-------~~~~~D~Vv~s~ 86 (480)
T PRK01438 15 QGLRVVVAG-LGVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT-------LPEDTDLVVTSP 86 (480)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-------ccCCCCEEEECC
Confidence 567899999 899999999999999999998874331 133556676533322111 123589999888
Q ss_pred CCCc
Q psy9949 262 GIPL 265 (383)
Q Consensus 262 g~~~ 265 (383)
|.+.
T Consensus 87 Gi~~ 90 (480)
T PRK01438 87 GWRP 90 (480)
T ss_pred CcCC
Confidence 8753
No 473
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.91 E-value=2 Score=38.88 Aligned_cols=75 Identities=23% Similarity=0.187 Sum_probs=56.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCccc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQ 267 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~ 267 (383)
.|.+|+|.|.+.-+|.-+..++...|++|+...+.. .++.+.+ ..+|++|.++|.+...
T Consensus 151 ~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t------------------~~L~~~~---~~ADIvI~Avgk~~lv 209 (279)
T PRK14178 151 AGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKT------------------ENLKAEL---RQADILVSAAGKAGFI 209 (279)
T ss_pred CCCEEEEECCCccccHHHHHHHHhCCCeeEEEecCh------------------hHHHHHH---hhCCEEEECCCccccc
Confidence 789999999888999999999999999888776432 1222222 3589999999877542
Q ss_pred ccccccccccCCCceEEEecC
Q psy9949 268 INSYLPFLKTGKFSKFVTLRS 288 (383)
Q Consensus 268 ~~~~~~~l~~~~~G~~v~~~~ 288 (383)
. -+.++ ++..++++|.
T Consensus 210 ~---~~~vk--~GavVIDVgi 225 (279)
T PRK14178 210 T---PDMVK--PGATVIDVGI 225 (279)
T ss_pred C---HHHcC--CCcEEEEeec
Confidence 2 34577 8999999864
No 474
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=90.88 E-value=0.89 Score=46.87 Aligned_cols=75 Identities=25% Similarity=0.249 Sum_probs=46.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecCch-HH-HHHhcCCCee-eeCCC-hHHHHHHhcCCCccEEEEcC
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSGDA-KD-LVTSLNPNLV-IDYNE-PEAMHSIAGAGPYDVILDAA 261 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~~~-~~-~~~~lg~~~v-~~~~~-~~~~~~i~~~~g~d~v~d~~ 261 (383)
+++.+|||+||+|-+|..+++.+... |.+|+++++... .. ....-+...+ .|..+ ..+...+ ..++|+||.++
T Consensus 313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~--l~~~D~ViHlA 390 (660)
T PRK08125 313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYH--IKKCDVVLPLV 390 (660)
T ss_pred hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHH--hcCCCEEEECc
Confidence 56789999999999999999888765 689999996542 11 1111112111 12222 1222221 24799999987
Q ss_pred CC
Q psy9949 262 GI 263 (383)
Q Consensus 262 g~ 263 (383)
+.
T Consensus 391 a~ 392 (660)
T PRK08125 391 AI 392 (660)
T ss_pred cc
Confidence 63
No 475
>PLN02650 dihydroflavonol-4-reductase
Probab=90.86 E-value=1.2 Score=41.92 Aligned_cols=36 Identities=31% Similarity=0.309 Sum_probs=31.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG 222 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~ 222 (383)
...++|||+||+|-+|..++..+...|.+|++++++
T Consensus 3 ~~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~ 38 (351)
T PLN02650 3 SQKETVCVTGASGFIGSWLVMRLLERGYTVRATVRD 38 (351)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 345789999999999999999998899999998854
No 476
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.85 E-value=2.2 Score=39.08 Aligned_cols=94 Identities=20% Similarity=0.129 Sum_probs=63.2
Q ss_pred hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCchHHHHHhcCCCeeeeCCChH
Q psy9949 165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGDAKDLVTSLNPNLVIDYNEPE 243 (383)
Q Consensus 165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~~~~~~~~lg~~~v~~~~~~~ 243 (383)
+||+....+..|.. -++. -.|++|+|+|.++.+|.-++.++...|+.|++.. +...
T Consensus 138 ~PcTp~ai~~ll~~-~~i~---~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~------------------- 194 (296)
T PRK14188 138 VPCTPLGCMMLLRR-VHGD---LSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD------------------- 194 (296)
T ss_pred cCCCHHHHHHHHHH-hCCC---CCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC-------------------
Confidence 44444444444443 2221 3799999999999999999999988899988874 3321
Q ss_pred HHHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCC
Q psy9949 244 AMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSP 289 (383)
Q Consensus 244 ~~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~ 289 (383)
+.+.. ...|+|+-++|.+..... ..++ ++..++++|..
T Consensus 195 l~e~~---~~ADIVIsavg~~~~v~~---~~lk--~GavVIDvGin 232 (296)
T PRK14188 195 LPAVC---RRADILVAAVGRPEMVKG---DWIK--PGATVIDVGIN 232 (296)
T ss_pred HHHHH---hcCCEEEEecCChhhcch---heec--CCCEEEEcCCc
Confidence 11111 257999999998775333 3467 88888888643
No 477
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=90.84 E-value=0.62 Score=38.37 Aligned_cols=75 Identities=13% Similarity=0.067 Sum_probs=48.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCccc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQ 267 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~ 267 (383)
.+++|+|.| +|.+|.--++.+...|++|+++.. +..+.+.+++.-. +..+ .+.+. +..++|+||-+++.....
T Consensus 12 ~~~~vlVvG-GG~va~rka~~Ll~~ga~V~VIsp-~~~~~l~~l~~i~-~~~~--~~~~~--dl~~a~lViaaT~d~e~N 84 (157)
T PRK06719 12 HNKVVVIIG-GGKIAYRKASGLKDTGAFVTVVSP-EICKEMKELPYIT-WKQK--TFSND--DIKDAHLIYAATNQHAVN 84 (157)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcC-ccCHHHHhccCcE-EEec--ccChh--cCCCceEEEECCCCHHHH
Confidence 678999999 899999988888888999888853 2222223344211 2111 11110 235799999999887754
Q ss_pred cc
Q psy9949 268 IN 269 (383)
Q Consensus 268 ~~ 269 (383)
..
T Consensus 85 ~~ 86 (157)
T PRK06719 85 MM 86 (157)
T ss_pred HH
Confidence 44
No 478
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=90.84 E-value=0.92 Score=39.18 Aligned_cols=72 Identities=14% Similarity=0.057 Sum_probs=46.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc--hHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD--AKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL 265 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~--~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~ 265 (383)
.+++|+|.| +|.+|...++.+...|++|++++... ....+.+.|.-..+ ..+.. ... ..++++||-+++.+.
T Consensus 8 ~gk~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~-~~~~~-~~d---l~~~~lVi~at~d~~ 81 (205)
T TIGR01470 8 EGRAVLVVG-GGDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWL-ARCFD-ADI---LEGAFLVIAATDDEE 81 (205)
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEE-eCCCC-HHH---hCCcEEEEECCCCHH
Confidence 578999999 89999999999999999999888543 22223333311111 11111 111 246888888888763
No 479
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.77 E-value=2 Score=39.22 Aligned_cols=76 Identities=22% Similarity=0.153 Sum_probs=56.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCccc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQ 267 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~ 267 (383)
.|++|+|.|.+.-+|.=+..++...|++|+..-+.. .++.+.+ ...|+++-++|.+...
T Consensus 157 ~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T------------------~~l~~~~---~~ADIvIsAvGkp~~i 215 (297)
T PRK14186 157 AGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRT------------------QDLASIT---READILVAAAGRPNLI 215 (297)
T ss_pred CCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCC------------------CCHHHHH---hhCCEEEEccCCcCcc
Confidence 789999999999999999999998999887664321 1122211 2488999999987653
Q ss_pred ccccccccccCCCceEEEecCC
Q psy9949 268 INSYLPFLKTGKFSKFVTLRSP 289 (383)
Q Consensus 268 ~~~~~~~l~~~~~G~~v~~~~~ 289 (383)
. -+.++ ++..++++|..
T Consensus 216 ~---~~~ik--~gavVIDvGin 232 (297)
T PRK14186 216 G---AEMVK--PGAVVVDVGIH 232 (297)
T ss_pred C---HHHcC--CCCEEEEeccc
Confidence 3 46778 88888888743
No 480
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=90.76 E-value=1.5 Score=38.41 Aligned_cols=72 Identities=28% Similarity=0.376 Sum_probs=45.4
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEecCc--hH-HH---HHhcCCC-ee--eeCCChHHHHHH-----hcCCCccEE
Q psy9949 192 VLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD--AK-DL---VTSLNPN-LV--IDYNEPEAMHSI-----AGAGPYDVI 257 (383)
Q Consensus 192 VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~--~~-~~---~~~lg~~-~v--~~~~~~~~~~~i-----~~~~g~d~v 257 (383)
++|+|++|++|..+++.+...|++|+.+++.. +. +. +++.+.. .. .|..+.+-...+ ...+..|.+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 58999999999999999998999998887542 22 22 2233332 11 344443222221 123578999
Q ss_pred EEcCCC
Q psy9949 258 LDAAGI 263 (383)
Q Consensus 258 ~d~~g~ 263 (383)
+.++|.
T Consensus 81 i~~ag~ 86 (239)
T TIGR01831 81 VLNAGI 86 (239)
T ss_pred EECCCC
Confidence 998874
No 481
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=90.74 E-value=0.91 Score=41.53 Aligned_cols=88 Identities=16% Similarity=0.174 Sum_probs=54.6
Q ss_pred CCEEEEEcCCchHHHH-HHHHHHHCCCEEEEEecCc----hHHHHHhcCCCeeeeCCChHHHHHHhcC---CCccEEEEc
Q psy9949 189 DKRVLVLGASGGVGTM-AVQLLKAWDIEVVTTCSGD----AKDLVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVILDA 260 (383)
Q Consensus 189 ~~~VlI~ga~g~vG~~-ai~la~~~G~~Vi~~~~~~----~~~~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v~d~ 260 (383)
.-+|.|.| +|.+|.. +..+.+.-+.++.++++.+ .+.+++++|..... . ++. .+.+. .++|+||++
T Consensus 4 klrVAIIG-tG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~~--~--~ie-~LL~~~~~~dIDiVf~A 77 (302)
T PRK08300 4 KLKVAIIG-SGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATSA--E--GID-GLLAMPEFDDIDIVFDA 77 (302)
T ss_pred CCeEEEEc-CcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCccc--C--CHH-HHHhCcCCCCCCEEEEC
Confidence 35799999 9999986 5555555567999888432 23556778854322 2 122 23222 579999999
Q ss_pred CCCCcccccccccccccCCCceEEEe
Q psy9949 261 AGIPLDQINSYLPFLKTGKFSKFVTL 286 (383)
Q Consensus 261 ~g~~~~~~~~~~~~l~~~~~G~~v~~ 286 (383)
++....... ...+. +.|+.+..
T Consensus 78 T~a~~H~e~--a~~a~--eaGk~VID 99 (302)
T PRK08300 78 TSAGAHVRH--AAKLR--EAGIRAID 99 (302)
T ss_pred CCHHHHHHH--HHHHH--HcCCeEEE
Confidence 998755444 33344 45555544
No 482
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=90.73 E-value=1.4 Score=40.77 Aligned_cols=90 Identities=14% Similarity=0.170 Sum_probs=55.1
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc
Q psy9949 189 DKRVLVLGASGGVGTMAVQLLKAWDI--EVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL 265 (383)
Q Consensus 189 ~~~VlI~ga~g~vG~~ai~la~~~G~--~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~ 265 (383)
..+|.|.| .|.+|.+.+..++..|. +|++.++++ +.+.+++.|....... +..+. ..+.|+||.|+....
T Consensus 6 ~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~~---~~~~~---~~~aDvViiavp~~~ 78 (307)
T PRK07502 6 FDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVTT---SAAEA---VKGADLVILCVPVGA 78 (307)
T ss_pred CcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceecC---CHHHH---hcCCCEEEECCCHHH
Confidence 36899999 99999999998888885 788887654 4566666765321111 11111 246899999987654
Q ss_pred cccc--ccccccccCCCceEEEec
Q psy9949 266 DQIN--SYLPFLKTGKFSKFVTLR 287 (383)
Q Consensus 266 ~~~~--~~~~~l~~~~~G~~v~~~ 287 (383)
.... .+...++ ++..+++++
T Consensus 79 ~~~v~~~l~~~l~--~~~iv~dvg 100 (307)
T PRK07502 79 SGAVAAEIAPHLK--PGAIVTDVG 100 (307)
T ss_pred HHHHHHHHHhhCC--CCCEEEeCc
Confidence 3111 1123344 555565554
No 483
>PF13478 XdhC_C: XdhC Rossmann domain; PDB: 3ON5_A 2WE8_B 2WE7_A.
Probab=90.72 E-value=0.51 Score=37.80 Aligned_cols=30 Identities=17% Similarity=0.297 Sum_probs=25.9
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q psy9949 192 VLVLGASGGVGTMAVQLLKAWDIEVVTTCSG 222 (383)
Q Consensus 192 VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~ 222 (383)
++|+| +|.++++++++|+.+|++|++++..
T Consensus 1 L~I~G-aG~va~al~~la~~lg~~v~v~d~r 30 (136)
T PF13478_consen 1 LVIFG-AGHVARALARLAALLGFRVTVVDPR 30 (136)
T ss_dssp EEEES--STCHHHHHHHHHHCTEEEEEEES-
T ss_pred CEEEe-CcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 47888 8999999999999999999999944
No 484
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=90.70 E-value=1.2 Score=38.36 Aligned_cols=34 Identities=26% Similarity=0.493 Sum_probs=29.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG 222 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~ 222 (383)
.+.+|+|.| .|++|..+++.+...|. +++.++.+
T Consensus 20 ~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 457899999 99999999999999998 78888754
No 485
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=90.61 E-value=1.3 Score=41.68 Aligned_cols=70 Identities=21% Similarity=0.174 Sum_probs=42.7
Q ss_pred EEEEEcCCchHHHHHHHHHHHC-CCEEEEEecCch-HHHHHhcCCCeee--eCC-ChHHHHHHhcCCCccEEEEcCC
Q psy9949 191 RVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSGDA-KDLVTSLNPNLVI--DYN-EPEAMHSIAGAGPYDVILDAAG 262 (383)
Q Consensus 191 ~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~~~-~~~~~~lg~~~v~--~~~-~~~~~~~i~~~~g~d~v~d~~g 262 (383)
+|+|+||+|-+|..++..+... |.+|+++++... ...........++ |.. +......+ ..++|+||.+++
T Consensus 3 ~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--~~~~d~ViH~aa 77 (347)
T PRK11908 3 KVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYH--VKKCDVILPLVA 77 (347)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHH--HcCCCEEEECcc
Confidence 6999999999999998888765 689999986432 2211111111222 322 22222222 237999999865
No 486
>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t
Probab=90.50 E-value=1.4 Score=39.32 Aligned_cols=33 Identities=36% Similarity=0.464 Sum_probs=30.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS 221 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~ 221 (383)
++.+|+|.| .|.+|..+++++..+|++|+++++
T Consensus 37 ~g~~vaIqG-fGnVG~~~a~~L~e~GakvvaVsD 69 (254)
T cd05313 37 KGKRVAISG-SGNVAQYAAEKLLELGAKVVTLSD 69 (254)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEC
Confidence 678999999 999999999999999999998875
No 487
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=90.50 E-value=0.7 Score=45.01 Aligned_cols=36 Identities=28% Similarity=0.289 Sum_probs=32.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG 222 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~ 222 (383)
+++.+|+|+||+|-+|..++..+...|.+|+++++.
T Consensus 118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~ 153 (436)
T PLN02166 118 RKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNF 153 (436)
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 456789999999999999999999899999999853
No 488
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=90.50 E-value=0.72 Score=43.19 Aligned_cols=89 Identities=18% Similarity=0.178 Sum_probs=53.1
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCC---EEEEEecCchH-HHHHhcCCCeee-eCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949 190 KRVLVLGASGGVGTMAVQLLKAWDI---EVVTTCSGDAK-DLVTSLNPNLVI-DYNEPEAMHSIAGAGPYDVILDAAGIP 264 (383)
Q Consensus 190 ~~VlI~ga~g~vG~~ai~la~~~G~---~Vi~~~~~~~~-~~~~~lg~~~v~-~~~~~~~~~~i~~~~g~d~v~d~~g~~ 264 (383)
.+|+|.||+|.+|..+++++...+. ++.++++.... +...-.+.+..+ +.... . ..++|+||.|+|+.
T Consensus 2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~~----~---~~~vDvVf~A~g~g 74 (334)
T PRK14874 2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKGKELKVEDLTTF----D---FSGVDIALFSAGGS 74 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCCceeEEeeCCHH----H---HcCCCEEEECCChH
Confidence 4799999999999999999988654 55666654321 111111222222 12111 1 23799999999987
Q ss_pred cccccccccccccCCCceEEEecC
Q psy9949 265 LDQINSYLPFLKTGKFSKFVTLRS 288 (383)
Q Consensus 265 ~~~~~~~~~~l~~~~~G~~v~~~~ 288 (383)
.....+ -+.+. .+..+++.++
T Consensus 75 ~s~~~~-~~~~~--~G~~VIDlS~ 95 (334)
T PRK14874 75 VSKKYA-PKAAA--AGAVVIDNSS 95 (334)
T ss_pred HHHHHH-HHHHh--CCCEEEECCc
Confidence 664441 33445 5556666554
No 489
>PLN02206 UDP-glucuronate decarboxylase
Probab=90.49 E-value=0.89 Score=44.35 Aligned_cols=35 Identities=31% Similarity=0.350 Sum_probs=31.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS 221 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~ 221 (383)
.++.+|||+||+|-+|..++..+...|.+|+++++
T Consensus 117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~ 151 (442)
T PLN02206 117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDN 151 (442)
T ss_pred cCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeC
Confidence 36689999999999999999999999999999874
No 490
>PRK07574 formate dehydrogenase; Provisional
Probab=90.49 E-value=1.6 Score=41.51 Aligned_cols=89 Identities=17% Similarity=0.169 Sum_probs=55.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD 266 (383)
Q Consensus 188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~ 266 (383)
.|++|.|.| .|.+|..+++.++.+|++|++.++.. ..+....++... +. ++.+.+ ...|+|+-+......
T Consensus 191 ~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~---~~--~l~ell---~~aDvV~l~lPlt~~ 261 (385)
T PRK07574 191 EGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTY---HV--SFDSLV---SVCDVVTIHCPLHPE 261 (385)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCcee---cC--CHHHHh---hcCCEEEEcCCCCHH
Confidence 567999999 99999999999999999999998653 233333444321 11 122222 347887777664321
Q ss_pred ----cccccccccccCCCceEEEec
Q psy9949 267 ----QINSYLPFLKTGKFSKFVTLR 287 (383)
Q Consensus 267 ----~~~~~~~~l~~~~~G~~v~~~ 287 (383)
.....++.|+ ++..+|.++
T Consensus 262 T~~li~~~~l~~mk--~ga~lIN~a 284 (385)
T PRK07574 262 TEHLFDADVLSRMK--RGSYLVNTA 284 (385)
T ss_pred HHHHhCHHHHhcCC--CCcEEEECC
Confidence 1111256667 776776653
No 491
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=90.46 E-value=2.2 Score=32.90 Aligned_cols=93 Identities=14% Similarity=0.121 Sum_probs=55.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecCc-hHHH----HHhcCCCee--eeCCChHHHHHHhcCCCccEEE
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWD-IEVVTTCSGD-AKDL----VTSLNPNLV--IDYNEPEAMHSIAGAGPYDVIL 258 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G-~~Vi~~~~~~-~~~~----~~~lg~~~v--~~~~~~~~~~~i~~~~g~d~v~ 258 (383)
.++++|+-.| +|. |..+..+++..+ .+|++++.++ ..+. ++.++..++ +..+....... ....+|+|+
T Consensus 18 ~~~~~vldlG-~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~D~v~ 93 (124)
T TIGR02469 18 RPGDVLWDIG-AGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEALED--SLPEPDRVF 93 (124)
T ss_pred CCCCEEEEeC-CCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccccChh--hcCCCCEEE
Confidence 6778899998 554 999999999875 5999999554 3333 334443322 22221110111 123699998
Q ss_pred EcCCCCc---ccccccccccccCCCceEEEe
Q psy9949 259 DAAGIPL---DQINSYLPFLKTGKFSKFVTL 286 (383)
Q Consensus 259 d~~g~~~---~~~~~~~~~l~~~~~G~~v~~ 286 (383)
-..+... .... +.+.++ ++|+++..
T Consensus 94 ~~~~~~~~~~~l~~-~~~~Lk--~gG~li~~ 121 (124)
T TIGR02469 94 IGGSGGLLQEILEA-IWRRLR--PGGRIVLN 121 (124)
T ss_pred ECCcchhHHHHHHH-HHHHcC--CCCEEEEE
Confidence 7543322 1222 267888 99998864
No 492
>PLN03075 nicotianamine synthase; Provisional
Probab=90.42 E-value=1 Score=41.08 Aligned_cols=97 Identities=15% Similarity=0.120 Sum_probs=56.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecCc-hHHHHHh-----cCCCeeeeCCChHHHHHHhcCCCccEEE
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAW--DIEVVTTCSGD-AKDLVTS-----LNPNLVIDYNEPEAMHSIAGAGPYDVIL 258 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~--G~~Vi~~~~~~-~~~~~~~-----lg~~~v~~~~~~~~~~~i~~~~g~d~v~ 258 (383)
.+.++|+-.| +|..|+.++.+++.+ +.+++.++.++ ..+.+++ .+...-+.....+..+.....++||+||
T Consensus 122 ~~p~~VldIG-cGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~~~~l~~FDlVF 200 (296)
T PLN03075 122 GVPTKVAFVG-SGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDVTESLKEYDVVF 200 (296)
T ss_pred CCCCEEEEEC-CCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhcccccCCcCEEE
Confidence 4678899999 999999888888654 44899999554 3344432 2222211111112222111236799999
Q ss_pred EcCC------CCcccccccccccccCCCceEEEe
Q psy9949 259 DAAG------IPLDQINSYLPFLKTGKFSKFVTL 286 (383)
Q Consensus 259 d~~g------~~~~~~~~~~~~l~~~~~G~~v~~ 286 (383)
-.+= ........+.+.|+ ++|.++.-
T Consensus 201 ~~ALi~~dk~~k~~vL~~l~~~Lk--PGG~Lvlr 232 (296)
T PLN03075 201 LAALVGMDKEEKVKVIEHLGKHMA--PGALLMLR 232 (296)
T ss_pred EecccccccccHHHHHHHHHHhcC--CCcEEEEe
Confidence 8742 11111222256788 99998763
No 493
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.36 E-value=2.4 Score=38.42 Aligned_cols=94 Identities=21% Similarity=0.219 Sum_probs=62.9
Q ss_pred hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHH
Q psy9949 165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEA 244 (383)
Q Consensus 165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~ 244 (383)
+||+.......|. .-++. -.|++|+|.|.+.-+|.=+..++...+++|+..-+. ..++
T Consensus 137 ~PcTp~avi~ll~-~~~i~---l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~------------------T~nl 194 (282)
T PRK14182 137 RPCTPAGVMRMLD-EARVD---PKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSR------------------TADL 194 (282)
T ss_pred CCCCHHHHHHHHH-HhCCC---CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC------------------CCCH
Confidence 4444443444443 33331 489999999999999999999998889988765432 1112
Q ss_pred HHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949 245 MHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS 288 (383)
Q Consensus 245 ~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~ 288 (383)
.+.+ ...|+++-++|.+.... -+.++ ++..++++|-
T Consensus 195 ~~~~---~~ADIvI~AvGk~~~i~---~~~ik--~gaiVIDvGi 230 (282)
T PRK14182 195 AGEV---GRADILVAAIGKAELVK---GAWVK--EGAVVIDVGM 230 (282)
T ss_pred HHHH---hhCCEEEEecCCcCccC---HHHcC--CCCEEEEeec
Confidence 2221 24899999999866433 46778 8888888864
No 494
>PLN02778 3,5-epimerase/4-reductase
Probab=90.33 E-value=1.4 Score=40.55 Aligned_cols=33 Identities=18% Similarity=0.299 Sum_probs=28.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEE
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTT 219 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~ 219 (383)
....+|||+||+|-+|..+++.+...|.+|+..
T Consensus 7 ~~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~ 39 (298)
T PLN02778 7 SATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYG 39 (298)
T ss_pred CCCCeEEEECCCCHHHHHHHHHHHhCCCEEEEe
Confidence 345789999999999999999999999988754
No 495
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=90.29 E-value=1.7 Score=40.88 Aligned_cols=73 Identities=16% Similarity=0.238 Sum_probs=44.4
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCE-EEEEecC---chHHHHHhcC--CC-ee--eeCCChHHHHHHhcCCCccEEEEcC
Q psy9949 191 RVLVLGASGGVGTMAVQLLKAWDIE-VVTTCSG---DAKDLVTSLN--PN-LV--IDYNEPEAMHSIAGAGPYDVILDAA 261 (383)
Q Consensus 191 ~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~~---~~~~~~~~lg--~~-~v--~~~~~~~~~~~i~~~~g~d~v~d~~ 261 (383)
+|||+||+|.+|..++..+...|.+ |+.+.+. .+.+....+. .. .+ .|..+.+-..++.+..++|+||.++
T Consensus 2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A 81 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHLA 81 (352)
T ss_pred eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEECC
Confidence 5999999999999999999888874 5544432 1222222221 11 11 2444433233333334799999998
Q ss_pred CC
Q psy9949 262 GI 263 (383)
Q Consensus 262 g~ 263 (383)
+.
T Consensus 82 ~~ 83 (352)
T PRK10084 82 AE 83 (352)
T ss_pred cc
Confidence 75
No 496
>KOG1252|consensus
Probab=90.22 E-value=1.2 Score=40.85 Aligned_cols=55 Identities=15% Similarity=0.254 Sum_probs=45.8
Q ss_pred hhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC----chHHHHHhcCCCeee
Q psy9949 179 TAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG----DAKDLVTSLNPNLVI 237 (383)
Q Consensus 179 ~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~----~~~~~~~~lg~~~v~ 237 (383)
.+.+ .+|.++||-.-+|..|...+.+++..|+++|++... ++...++.+|+.-+.
T Consensus 97 ~G~i----~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~ 155 (362)
T KOG1252|consen 97 KGLI----TPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLRALGAEIIL 155 (362)
T ss_pred cCCc----cCCceEEEecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHHHcCCEEEe
Confidence 4556 899999999999999999999999999999999843 345677889986553
No 497
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=90.16 E-value=3 Score=34.78 Aligned_cols=73 Identities=21% Similarity=0.375 Sum_probs=40.1
Q ss_pred CCCCEEEEEcCCchH---HHHHHHHHHHCCCEEEE--EecCch--------HHHHHhcCCCeeeeCCCh-HHHHHHhcCC
Q psy9949 187 PRDKRVLVLGASGGV---GTMAVQLLKAWDIEVVT--TCSGDA--------KDLVTSLNPNLVIDYNEP-EAMHSIAGAG 252 (383)
Q Consensus 187 ~~~~~VlI~ga~g~v---G~~ai~la~~~G~~Vi~--~~~~~~--------~~~~~~lg~~~v~~~~~~-~~~~~i~~~~ 252 (383)
.+..+|+|+-|.|.- |+.++..+...|.+|.+ ....++ .+.++++|...+ ..... +....+ .
T Consensus 23 ~~~~~v~il~G~GnNGgDgl~~AR~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~---~ 98 (169)
T PF03853_consen 23 PKGPRVLILCGPGNNGGDGLVAARHLANRGYNVTVYLVGPPEKLSEDAKQQLEILKKMGIKII-ELDSDEDLSEAL---E 98 (169)
T ss_dssp CTT-EEEEEE-SSHHHHHHHHHHHHHHHTTCEEEEEEEESSSSTSHHHHHHHHHHHHTT-EEE-SSCCGSGGGHHG---S
T ss_pred cCCCeEEEEECCCCChHHHHHHHHHHHHCCCeEEEEEEeccccCCHHHHHHHHHHHhcCCcEe-eccccchhhccc---c
Confidence 456677766445544 57777777788997777 333221 245667776433 32222 222222 2
Q ss_pred CccEEEEcCCC
Q psy9949 253 PYDVILDAAGI 263 (383)
Q Consensus 253 g~d~v~d~~g~ 263 (383)
.+|+|||+.=+
T Consensus 99 ~~dlIIDal~G 109 (169)
T PF03853_consen 99 PADLIIDALFG 109 (169)
T ss_dssp CESEEEEES-S
T ss_pred cccEEEEeccc
Confidence 79999998644
No 498
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=90.00 E-value=5.6 Score=37.06 Aligned_cols=91 Identities=14% Similarity=0.195 Sum_probs=56.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHH-HCCC-EEEEEecCc-h-HHHHHhc----CCCeeeeCCChHHHHHHhcCCCccEEE
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLK-AWDI-EVVTTCSGD-A-KDLVTSL----NPNLVIDYNEPEAMHSIAGAGPYDVIL 258 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~-~~G~-~Vi~~~~~~-~-~~~~~~l----g~~~v~~~~~~~~~~~i~~~~g~d~v~ 258 (383)
+...+++|.| +|+.+.+.+..+. ..+. +|.+..++. + .++++++ |.. +...++ ..+.+ .+.|+|+
T Consensus 127 ~~~~~v~iiG-aG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~~~--~~~av---~~aDiVv 199 (326)
T TIGR02992 127 EDSSVVAIFG-AGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAATD--PRAAM---SGADIIV 199 (326)
T ss_pred CCCcEEEEEC-CCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEeCC--HHHHh---ccCCEEE
Confidence 4557899999 8999988777776 5776 677776653 3 2344443 432 222222 22222 4699999
Q ss_pred EcCCCCcccccccccccccCCCceEEEecC
Q psy9949 259 DAAGIPLDQINSYLPFLKTGKFSKFVTLRS 288 (383)
Q Consensus 259 d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~ 288 (383)
.|++...-... .+.++ ++-.+..+|.
T Consensus 200 taT~s~~p~i~--~~~l~--~g~~i~~vg~ 225 (326)
T TIGR02992 200 TTTPSETPILH--AEWLE--PGQHVTAMGS 225 (326)
T ss_pred EecCCCCcEec--HHHcC--CCcEEEeeCC
Confidence 99987553333 34666 7666666654
No 499
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=89.99 E-value=1 Score=43.14 Aligned_cols=89 Identities=26% Similarity=0.402 Sum_probs=50.1
Q ss_pred EEEEcCCchHHHHHHHHHHHCC-C-EEEEEecCch-HH-HHHhcC-C--C-eeeeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949 192 VLVLGASGGVGTMAVQLLKAWD-I-EVVTTCSGDA-KD-LVTSLN-P--N-LVIDYNEPEAMHSIAGAGPYDVILDAAGI 263 (383)
Q Consensus 192 VlI~ga~g~vG~~ai~la~~~G-~-~Vi~~~~~~~-~~-~~~~lg-~--~-~v~~~~~~~~~~~i~~~~g~d~v~d~~g~ 263 (383)
|+|+|+ |.+|..+++.+...+ . +|++.+++.+ .+ ++.++. . . ..+|..+.+-..++ ..+.|+|++|+|.
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~--~~~~dvVin~~gp 77 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAEL--LRGCDVVINCAGP 77 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHH--HTTSSEEEE-SSG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHH--HhcCCEEEECCcc
Confidence 789997 999999999988765 4 7888887654 33 444322 1 1 12454443322222 2467999999987
Q ss_pred CcccccccccccccCCCceEEEe
Q psy9949 264 PLDQINSYLPFLKTGKFSKFVTL 286 (383)
Q Consensus 264 ~~~~~~~~~~~l~~~~~G~~v~~ 286 (383)
....... ..|++ .+-.+++.
T Consensus 78 ~~~~~v~-~~~i~--~g~~yvD~ 97 (386)
T PF03435_consen 78 FFGEPVA-RACIE--AGVHYVDT 97 (386)
T ss_dssp GGHHHHH-HHHHH--HT-EEEES
T ss_pred chhHHHH-HHHHH--hCCCeecc
Confidence 6433221 44566 56677764
No 500
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=89.98 E-value=2.5 Score=38.34 Aligned_cols=76 Identities=21% Similarity=0.226 Sum_probs=55.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD 266 (383)
Q Consensus 187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~ 266 (383)
-.|++|+|.|.+.-+|.=+..++...++.|+..-+. ..++.+.. ...|+++-++|.+..
T Consensus 157 l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~------------------T~~L~~~~---~~ADIvV~AvGkp~~ 215 (288)
T PRK14171 157 LTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSK------------------THNLSSIT---SKADIVVAAIGSPLK 215 (288)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC------------------CCCHHHHH---hhCCEEEEccCCCCc
Confidence 378999999999999999999999889988754432 11222222 248999999998764
Q ss_pred cccccccccccCCCceEEEecC
Q psy9949 267 QINSYLPFLKTGKFSKFVTLRS 288 (383)
Q Consensus 267 ~~~~~~~~l~~~~~G~~v~~~~ 288 (383)
.. -++++ ++..++++|-
T Consensus 216 i~---~~~vk--~GavVIDvGi 232 (288)
T PRK14171 216 LT---AEYFN--PESIVIDVGI 232 (288)
T ss_pred cC---HHHcC--CCCEEEEeec
Confidence 33 46788 8888888863
Done!