Query psy9950
Match_columns 732
No_of_seqs 364 out of 1693
Neff 6.9
Searched_HMMs 29240
Date Fri Aug 16 23:50:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9950.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9950hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nty_A Triple functional domai 100.0 1.1E-52 3.8E-57 450.7 33.0 299 294-595 4-309 (311)
2 1kz7_A Guanine nucleotide exch 100.0 5.7E-52 2E-56 453.1 37.1 308 293-602 5-333 (353)
3 2rgn_B RHOA/RAC/CDC42 exchange 100.0 3.6E-52 1.2E-56 454.8 34.2 304 294-598 7-322 (354)
4 3ky9_A Proto-oncogene VAV; cal 100.0 1.8E-47 6E-52 444.0 27.1 346 216-596 126-509 (587)
5 2dfk_A Collybistin II; DH doma 100.0 1E-45 3.5E-50 410.5 37.1 305 291-613 33-373 (402)
6 3t06_A PDZ-rhogef, RHO guanine 100.0 1.3E-45 4.6E-50 411.3 32.3 298 292-593 56-407 (418)
7 2z0q_A XPLN, RHO guanine nucle 100.0 5.5E-46 1.9E-50 404.4 27.6 292 293-593 13-345 (346)
8 2vrw_B P95VAV, VAV1, proto-onc 100.0 3.1E-45 1.1E-49 407.0 33.8 288 294-595 20-336 (406)
9 1foe_A T-lymphoma invasion and 100.0 3.2E-45 1.1E-49 402.9 30.6 299 297-598 9-370 (377)
10 1xcg_A PDZ-rhogef, RHO guanine 100.0 6E-45 2E-49 399.3 31.5 297 294-594 16-366 (368)
11 2pz1_A RHO guanine nucleotide 100.0 1.7E-44 5.7E-49 408.0 35.9 304 292-613 111-450 (466)
12 3p6a_A RHO guanine nucleotide 100.0 2.1E-44 7.1E-49 396.1 31.3 290 294-594 22-371 (377)
13 1txd_A RHO guanine nucleotide 100.0 7.6E-44 2.6E-48 393.0 32.2 300 293-597 18-372 (385)
14 3odw_A RHO guanine nucleotide 100.0 1E-43 3.6E-48 407.5 31.9 298 294-595 175-525 (536)
15 3mpx_A FYVE, rhogef and PH dom 100.0 2.2E-43 7.4E-48 395.2 28.7 293 294-597 17-340 (434)
16 1dbh_A Protein (human SOS 1); 100.0 5.6E-43 1.9E-47 381.8 27.2 287 300-594 4-349 (354)
17 3jzy_A Intersectin 2; C2 domai 100.0 1.6E-42 5.6E-47 395.3 0.0 295 294-598 22-366 (510)
18 3ksy_A SOS-1, SON of sevenless 100.0 1.6E-39 5.4E-44 398.3 20.5 294 298-598 199-550 (1049)
19 1by1_A Protein (PIX); RHO-GTPa 100.0 2.2E-33 7.5E-38 284.2 12.5 176 297-475 11-196 (209)
20 3jv3_A Intersectin-1; SH3 doma 100.0 2.4E-30 8.2E-35 273.0 20.2 179 293-474 76-270 (283)
21 1fho_A UNC-89; pleckstrin homo 99.7 5.7E-19 1.9E-23 162.0 4.0 110 483-597 2-115 (119)
22 2lg1_A A-kinase anchor protein 99.5 2.3E-14 7.8E-19 141.9 6.4 140 447-595 2-173 (185)
23 3qwm_A Iqsec1, IQ motif and SE 99.2 1.4E-10 4.9E-15 108.1 14.1 108 486-596 8-124 (140)
24 1zc3_B Exocyst complex protein 99.2 4.9E-10 1.7E-14 101.9 14.6 99 489-595 6-108 (113)
25 1v61_A RAC/CDC42 guanine nucle 99.1 1E-10 3.6E-15 108.8 8.8 109 477-593 13-125 (132)
26 4gou_A EHRGS-rhogef; RGS domai 98.5 8.2E-06 2.8E-10 82.1 19.8 151 301-456 189-354 (518)
27 2i5f_A Pleckstrin; PH domain, 97.8 0.0001 3.6E-09 64.9 10.8 94 489-593 5-108 (109)
28 2dn6_A KIAA0640 protein; PH do 97.7 0.0002 7E-09 63.6 11.2 96 488-595 5-104 (115)
29 1u5d_A SKAP55, SRC kinase-asso 97.7 9.9E-05 3.4E-09 64.7 8.0 96 489-595 1-106 (108)
30 1x05_A Pleckstrin; PH domain, 97.7 0.00015 5.1E-09 66.2 9.4 96 487-593 14-119 (129)
31 2cod_A Centaurin-delta 1; ARF 97.7 0.00023 7.9E-09 63.6 10.4 92 489-594 6-99 (115)
32 1pls_A Pleckstrin homology dom 97.6 0.00027 9.4E-09 62.8 10.1 93 490-593 4-100 (113)
33 1v89_A Hypothetical protein KI 97.6 0.0002 6.7E-09 63.9 8.8 97 489-593 6-111 (118)
34 1unq_A RAC-alpha serine/threon 97.6 0.00032 1.1E-08 63.6 10.3 99 489-595 6-111 (125)
35 2lul_A Tyrosine-protein kinase 97.6 0.00024 8.2E-09 68.3 9.7 94 489-593 13-120 (164)
36 4a6h_A Phosphatidylinositol 4, 97.5 0.00054 1.8E-08 62.5 11.2 98 491-593 6-117 (120)
37 1btk_A Bruton'S tyrosine kinas 97.5 0.00056 1.9E-08 66.1 11.9 95 491-593 3-131 (169)
38 3rcp_A Pleckstrin homology dom 97.5 0.00028 9.5E-09 61.7 8.7 90 494-593 2-92 (103)
39 1eaz_A Tandem PH domain contai 97.5 0.00044 1.5E-08 62.4 10.3 96 488-595 11-112 (125)
40 1x1g_A Pleckstrin 2; PH domain 97.5 0.00017 5.7E-09 65.8 7.4 97 487-593 14-123 (129)
41 2d9x_A Oxysterol binding prote 97.5 0.00033 1.1E-08 63.2 9.3 97 489-595 6-105 (120)
42 1v88_A Oxysterol binding prote 97.4 0.00032 1.1E-08 64.9 8.2 98 488-593 5-123 (130)
43 1fgy_A GRP1; PH domain, signal 97.4 0.00076 2.6E-08 60.9 10.6 97 490-594 4-120 (127)
44 1wg7_A Dedicator of cytokinesi 97.4 0.0011 3.9E-08 62.0 11.9 98 488-595 15-125 (150)
45 1fao_A Dual adaptor of phospho 97.4 0.00082 2.8E-08 60.9 10.3 95 489-595 16-113 (126)
46 2rsg_A Collagen type IV alpha- 97.4 0.00035 1.2E-08 60.1 7.3 89 493-592 3-92 (94)
47 2dkp_A Pleckstrin homology dom 97.4 0.00093 3.2E-08 60.5 10.3 94 489-593 19-118 (128)
48 2dhk_A TBC1 domain family memb 97.3 0.00073 2.5E-08 61.0 9.4 95 489-595 6-105 (119)
49 1v5u_A SBF1, SET binding facto 97.3 0.00047 1.6E-08 61.4 8.0 93 489-593 6-110 (117)
50 2w2x_D 1-phosphatidylinositol- 97.3 0.00041 1.4E-08 63.4 7.7 105 490-595 11-120 (124)
51 2d9y_A Pleckstrin homology dom 97.3 0.00063 2.2E-08 60.6 8.4 94 489-593 9-108 (117)
52 1wgq_A FYVE, rhogef and PH dom 97.3 0.0015 5E-08 57.7 10.3 94 489-593 6-102 (109)
53 1x1f_A Signal-transducing adap 97.2 0.001 3.5E-08 63.0 9.6 91 491-593 18-112 (149)
54 1upq_A PEPP1; PH domain, phosp 97.2 0.00085 2.9E-08 60.4 8.4 93 490-593 10-108 (123)
55 1u5f_A SRC-associated adaptor 97.2 0.001 3.5E-08 62.3 9.2 95 488-593 14-118 (148)
56 3tfm_A Myosin X; split PH doma 97.2 0.001 3.6E-08 67.3 9.5 96 487-594 54-155 (228)
57 2yry_A Pleckstrin homology dom 97.2 0.00094 3.2E-08 60.0 8.2 94 489-593 20-119 (122)
58 4h8s_A DCC-interacting protein 97.2 0.05 1.7E-06 59.6 23.6 94 489-593 299-397 (407)
59 2cof_A Protein KIAA1914; PH do 97.2 0.0022 7.5E-08 56.5 10.3 94 489-593 6-100 (107)
60 2rlo_A Centaurin-gamma 1; spli 97.1 0.0012 4.2E-08 60.3 8.6 102 491-595 4-125 (128)
61 2q13_A DCC-interacting protein 97.1 0.029 1E-06 61.0 21.1 94 489-593 276-374 (385)
62 2da0_A 130-kDa phosphatidylino 97.1 0.0028 9.5E-08 56.6 10.4 91 489-593 8-100 (114)
63 2p0d_A RHO GTPase-activating p 96.9 0.0055 1.9E-07 56.2 10.8 103 490-595 11-125 (129)
64 2y7b_A Actin-binding protein a 96.9 0.0032 1.1E-07 57.5 8.9 101 490-595 4-129 (134)
65 1dyn_A Dynamin; signal transdu 96.9 0.0047 1.6E-07 56.2 9.7 94 491-592 12-115 (125)
66 1u5e_A SRC-associated adaptor 96.8 0.0037 1.3E-07 62.6 9.5 97 487-594 102-208 (211)
67 2fjl_A 1-phosphatidylinositol- 96.8 0.0051 1.8E-07 57.9 9.7 103 492-595 2-149 (150)
68 1wi1_A Calcium-dependent activ 96.7 0.0083 2.8E-07 55.0 9.9 95 491-593 8-109 (126)
69 2dtc_A RAL guanine nucleotide 96.7 0.014 4.8E-07 53.6 11.3 83 507-593 25-111 (126)
70 1wjm_A Beta-spectrin III; PH d 96.4 0.011 3.6E-07 53.4 9.0 85 505-594 31-117 (123)
71 3aj4_A Pleckstrin homology dom 96.4 0.011 3.9E-07 52.0 9.0 92 491-593 5-110 (112)
72 3a8p_A T-lymphoma invasion and 96.4 0.017 5.7E-07 59.8 11.6 86 506-596 39-126 (263)
73 2j59_M RHO-GTPase activating p 96.3 0.0088 3E-07 57.1 8.4 78 506-593 29-110 (168)
74 3cxb_B Pleckstrin homology dom 96.2 0.025 8.7E-07 50.3 10.2 77 506-593 20-100 (112)
75 1v5p_A Pleckstrin homology dom 96.1 0.018 6.3E-07 52.6 8.9 95 491-593 15-119 (126)
76 2coc_A FYVE, rhogef and PH dom 95.9 0.023 7.9E-07 51.0 8.4 90 491-593 8-105 (112)
77 2d9v_A Pleckstrin homology dom 95.9 0.08 2.7E-06 48.2 12.0 94 489-593 6-113 (130)
78 3pp2_A RHO GTPase-activating p 95.9 0.054 1.8E-06 49.1 10.7 86 506-594 31-123 (124)
79 2r09_A Cytohesin-3; autoinhibi 95.7 0.03 1E-06 60.2 9.8 97 490-594 212-328 (347)
80 1qqg_A IRS-1, insulin receptor 95.7 0.019 6.5E-07 59.4 7.6 98 489-596 8-114 (264)
81 1btn_A Beta-spectrin; signal t 95.6 0.046 1.6E-06 47.3 8.8 82 506-592 23-106 (106)
82 1dro_A Beta-spectrin; cytoskel 95.1 0.025 8.4E-07 51.0 5.4 85 506-593 32-118 (122)
83 3lju_X ARF-GAP with dual PH do 95.0 0.033 1.1E-06 60.7 7.3 94 489-594 267-372 (386)
84 2ys3_A UNC-112-related protein 94.9 0.049 1.7E-06 50.4 6.8 94 494-592 12-110 (137)
85 3lju_X ARF-GAP with dual PH do 94.6 0.17 5.7E-06 55.2 11.5 94 492-593 147-245 (386)
86 3tca_A Amyloid beta A4 precurs 94.4 0.12 4.1E-06 53.4 9.4 98 491-593 168-275 (291)
87 4f7h_A Fermitin family homolog 94.2 0.11 3.8E-06 49.4 7.8 83 505-592 64-148 (173)
88 2rov_A RHO-associated protein 94.1 0.072 2.5E-06 48.0 6.1 83 506-593 20-114 (117)
89 3hk0_A Growth factor receptor- 93.5 0.46 1.6E-05 48.7 11.5 98 492-594 133-240 (256)
90 1mai_A Phospholipase C delta-1 93.5 0.34 1.2E-05 44.4 9.6 97 491-594 12-121 (131)
91 2d9w_A Docking protein 2; PH d 93.5 0.44 1.5E-05 43.3 10.0 100 489-593 10-120 (127)
92 4gmv_A RAS-associated and plec 91.5 1.3 4.5E-05 45.9 11.9 99 492-595 159-267 (281)
93 4ejn_A RAC-alpha serine/threon 90.7 0.64 2.2E-05 50.9 9.3 97 490-594 5-108 (446)
94 4bbk_A Kindlin-1, fermitin fam 90.5 1.2 4.1E-05 42.0 9.3 83 505-592 43-127 (165)
95 1w1g_A HPDK1, 3-phosphoinositi 89.0 1.6 5.4E-05 41.0 9.0 88 490-594 51-139 (151)
96 3hie_A Protein PSL1, exocyst c 88.3 2.8 9.5E-05 40.1 10.2 81 504-593 62-147 (171)
97 3a8n_A TIAM-1, T-lymphoma inva 87.0 0.61 2.1E-05 48.4 5.3 85 506-595 39-125 (279)
98 3a58_A Exocyst complex compone 86.4 3.6 0.00012 42.5 10.5 81 504-593 132-217 (320)
99 3lbx_A Spectrin alpha chain, e 85.5 4.4 0.00015 38.1 10.2 100 18-121 17-122 (161)
100 2d9z_A Protein kinase C, NU ty 79.6 9.5 0.00033 34.6 9.2 95 487-593 4-122 (129)
101 3f31_A Spectrin alpha chain, b 79.6 12 0.00041 34.5 10.5 57 23-79 12-71 (149)
102 2coa_A Protein kinase C, D2 ty 66.2 18 0.00061 32.7 7.6 94 488-593 5-118 (125)
103 3ml4_A Protein DOK-7; tyrosine 64.7 14 0.00049 36.7 7.3 95 491-592 9-111 (224)
104 3ulb_A Target of rapamycin com 63.0 37 0.0013 30.4 8.9 57 541-597 59-117 (121)
105 1cun_A Protein (alpha spectrin 62.5 35 0.0012 32.5 9.9 54 25-78 74-130 (213)
106 1u4q_A Spectrin alpha chain, b 56.1 42 0.0014 34.3 9.7 55 24-78 182-239 (322)
107 1s35_A Beta-I spectrin, spectr 52.6 67 0.0023 30.6 10.0 54 26-79 76-132 (214)
108 3kbt_A Beta-I spectrin, spectr 51.5 39 0.0013 34.7 8.5 55 25-79 78-135 (326)
109 3fb2_A Spectrin alpha chain, b 49.6 27 0.00091 33.9 6.5 55 25-79 87-144 (218)
110 2adz_A Alpha-1-syntrophin; pro 48.9 45 0.0015 32.0 7.7 53 539-593 121-176 (178)
111 3edv_A Spectrin beta chain, br 46.8 77 0.0026 32.3 9.9 54 26-79 188-244 (323)
112 1quu_A Human skeletal muscle a 45.6 1.5E+02 0.0052 29.0 11.6 54 26-79 90-154 (250)
113 1u5p_A Spectrin alpha chain, b 45.4 77 0.0026 30.2 9.1 55 24-78 76-133 (216)
114 1sjj_A Actinin; 3-helix bundle 43.9 1E+02 0.0036 36.3 11.7 121 24-146 444-597 (863)
115 3lbx_B Beta-I spectrin, spectr 42.1 97 0.0033 29.1 9.1 54 26-79 79-135 (185)
116 1z87_A Alpha-1-syntrophin; pro 40.9 80 0.0027 32.1 8.6 37 555-593 225-261 (263)
117 1u4q_A Spectrin alpha chain, b 39.4 1.7E+02 0.0059 29.5 11.2 55 24-78 76-133 (322)
118 1v5m_A SH2 and PH domain-conta 38.7 30 0.001 31.6 4.3 36 555-593 94-129 (136)
119 3haj_A Human pacsin2 F-BAR; pa 37.2 4.5E+02 0.015 28.7 15.6 68 298-366 39-106 (486)
120 3r6n_A Desmoplakin; spectrin r 33.9 1.2E+02 0.0042 33.2 9.3 68 4-79 154-224 (450)
121 3tfm_A Myosin X; split PH doma 30.2 37 0.0013 33.5 4.0 33 555-591 194-226 (228)
122 3edu_A Beta-I spectrin, spectr 29.6 85 0.0029 30.2 6.5 53 26-78 77-132 (218)
123 3zvr_A Dynamin-1; hydrolase, D 29.0 4.2E+02 0.014 31.1 13.2 91 491-589 540-640 (772)
124 2kbt_A Chimera of proto-oncoge 28.4 12 0.00041 34.4 0.0 28 296-323 103-130 (142)
125 3kbt_A Beta-I spectrin, spectr 27.2 91 0.0031 31.8 6.6 53 26-78 186-241 (326)
126 3edv_A Spectrin beta chain, br 26.9 1.8E+02 0.0061 29.5 8.7 54 24-77 80-136 (323)
127 3pdy_A Plectin; cytoskeleton, 22.4 4E+02 0.014 25.3 9.9 89 28-120 79-171 (210)
128 3pe0_A Plectin; cytoskeleton, 22.2 1.4E+02 0.0048 30.4 6.7 48 24-71 81-131 (283)
129 3abh_A Pacsin2, protein kinase 22.2 6.1E+02 0.021 25.5 13.9 69 299-368 47-115 (312)
130 3aco_A Pacsin2, protein kinase 21.9 6.6E+02 0.023 25.8 13.1 67 299-366 47-113 (350)
131 3i2w_A Syndapin, LD46328P; EFC 21.3 3.4E+02 0.011 27.2 9.4 69 298-367 25-93 (290)
132 2efl_A Formin-binding protein 20.6 5.3E+02 0.018 25.6 10.8 67 299-366 32-101 (305)
133 3m3w_A Pacsin3, protein kinase 20.5 5.2E+02 0.018 26.4 10.8 70 298-368 37-106 (320)
134 2v0o_A FCHO2, FCH domain only 20.0 6.2E+02 0.021 24.7 11.5 63 299-366 36-98 (276)
No 1
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A
Probab=100.00 E-value=1.1e-52 Score=450.75 Aligned_cols=299 Identities=34% Similarity=0.607 Sum_probs=270.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC--CCchhhhhhHHHHhCCHHHHHHHHHHH-HHHHHHHHhcC
Q psy9950 294 LKTQKNLLFIMREMIQTERDYVKSLEYVILNYIPELTRE--DIPQALRGQRNVIFGNIEKIYEFHSQH-FLGELEQCANL 370 (732)
Q Consensus 294 ~k~~~kRq~iI~ELi~TE~~YV~~L~~l~~~y~~pL~~~--~~p~~l~~~~~~IF~NIe~I~~~Hs~~-fL~~Le~~~~~ 370 (732)
.|+.+||++||+||++||++||++|+.++++|+.||... .+|..+.+++..||+||++|+++| .. ||.+|+.+...
T Consensus 4 ~k~~~kR~~vi~El~~TE~~Yv~~L~~l~~~y~~~l~~~~~~l~~~~~~~~~~iF~ni~~i~~~h-~~~fl~~L~~~~~~ 82 (311)
T 1nty_A 4 RKSARRKEFIMAELIQTEKAYVRDLRECMDTYLWEMTSGVEEIPPGIVNKELIIFGNMQEIYEFH-NNIFLKELEKYEQL 82 (311)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCCCTTTTTCHHHHHTTHHHHHHHH-HHTHHHHHHHTTTC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCChhhhhhHHHhhcCHHHHHHHH-HHHHHHHHHHHHCC
Confidence 466789999999999999999999999999999999863 467666678899999999999999 55 99999999988
Q ss_pred CCchHHHHhhhhhhhhhHHHhhhchHHHHHHHHHHhHHHHHHHHHhhcCCCChhhhhhhhHhhHHhhHHHHHHHHhcCcc
Q psy9950 371 PLSVGQCFLNHENKFYLYALYNKNKPKSDALMTEYGSSFFKAKQLELADRMDLASYLLKPVQRMGKYALLLQQLMKASRQ 450 (732)
Q Consensus 371 ~~~Ig~iFl~~~~~f~~Y~~Y~~n~~~a~~~L~~~~~~ffk~~~~~l~~~l~L~slLikPVQRI~rY~LLLkeLlK~T~~ 450 (732)
+..||++|+++++.|++|..||.|++.|..++.+....||+.++...+.+++|.+||++|||||+||+|||++|+|+|++
T Consensus 83 ~~~ig~~f~~~~~~~~~Y~~Y~~n~~~a~~~l~~~~~~f~~~~~~~~~~~l~L~~~Li~PvQRi~rY~LLL~~llk~t~~ 162 (311)
T 1nty_A 83 PEDVGHCFVTWADKFQMYVTYCKNKPDSTQLILEHAGSYFDEIQQRHGLANSISSYLIKPVQRITKYQLLLKELLTCCEE 162 (311)
T ss_dssp GGGTHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHTCSSCHHHHHTHHHHHHHHHHHHHHHHHHTSCT
T ss_pred HHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHhhhhHHHHHHHHHHHHHHHHhCCC
Confidence 88999999999999999999999999999999887788999988877889999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHhhhhhhHhhhhhhccccccccccccccccccEEEEeCC---CCeeEEEEEccCCeEEEEEeeeCC
Q psy9950 451 DVKDIKEAESMVRFQLRHGNDLLAMDSLRECDVNLKEQGRLLRQNEFIVSQGK---GKKCLRHVFLFEELILFSKARRFP 527 (732)
Q Consensus 451 d~~dL~~Al~~v~~~~~~iNd~~~~~~i~~~~~~L~~~grll~~g~l~v~~~~---~kk~~r~vFLF~D~LL~~K~kk~~ 527 (732)
+|++|++|+++|+.++.++|+.+.+..+++++..+...|+++.+|.+.++.++ +++++||+|||+|+||+||+++.
T Consensus 163 ~h~~l~~Al~~~~~v~~~~N~~~~~~~l~~~~~~l~~~g~li~~~~~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~- 241 (311)
T 1nty_A 163 GKGEIKDGLEVMLSVPKRANDAMHLSMLEGFDENIESQGELILQESFQVWDPKTLIRKGRERHLFLFEMSLVFSKEVKD- 241 (311)
T ss_dssp TCTTHHHHHHHHHHHHHHHHHHHHHTTEESCCSCSGGGCCEEEEEEEEEECSSSSSCCEEEEEEEEESSEEEEEEEEEC-
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCChHhcCCceeeeeEEEEcCcccccccceeEEEeccCeEEEEEeecc-
Confidence 99999999999999999999999888899999899999999999999998764 46789999999999999999853
Q ss_pred CCCCCcceEEeeeeeecceEEEEecCCCCCcEEEEEee-cCCCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q psy9950 528 DRKNLDLYIYKHSMKMSDIGITAQIGDSSTKFEIWFRK-RKPNETFTLQSMSEDIKQAWTDELSNLLWK 595 (732)
Q Consensus 528 ~~~~~~~y~~K~~i~l~~i~v~e~~~~~~~~F~I~~~~-~~~~~~~~L~A~S~eeK~~Wi~~I~~~i~~ 595 (732)
..+...|.||..|++.++.|++..+++++.|.||+.+ ..+...|+|+|+|+++|+.|+++|+++|.+
T Consensus 242 -~~~~~~y~~k~~i~l~~~~v~e~~~~~~~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~e 309 (311)
T 1nty_A 242 -SSGRSKYLYKSKLFTSELGVTEHVEGDPCKFALWVGRTPTSDNKIVLKASSIENKQDWIKHIREVIQE 309 (311)
T ss_dssp -TTCCEEEEEEEEEEGGGEEEECCCTTCTTEEEEEESSSCCTTTCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred -CCCCceeEEeeeeeccceeeEEccCCCCceEEEEeCCCCCCCceEEEECCCHHHHHHHHHHHHHHHhh
Confidence 2345689999999999999999888888999999843 345678999999999999999999999854
No 2
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=100.00 E-value=5.7e-52 Score=453.05 Aligned_cols=308 Identities=36% Similarity=0.635 Sum_probs=276.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC----CchhhhhhHHHHhCCHHHHHHHHHHHHHHHHHHHh
Q psy9950 293 TLKTQKNLLFIMREMIQTERDYVKSLEYVILNYIPELTRED----IPQALRGQRNVIFGNIEKIYEFHSQHFLGELEQCA 368 (732)
Q Consensus 293 ~~k~~~kRq~iI~ELi~TE~~YV~~L~~l~~~y~~pL~~~~----~p~~l~~~~~~IF~NIe~I~~~Hs~~fL~~Le~~~ 368 (732)
..+.+.+|++||+||++||++||++|+.++++|+.||.... +|..+.+++..||+||++|+++|++.||.+|+.+.
T Consensus 5 ~~~~~~kR~~vi~ELl~TE~~Yv~~L~~l~~~y~~pl~~~~~~~~~p~~~~~~~~~iF~ni~~I~~~h~~~fl~~Le~~~ 84 (353)
T 1kz7_A 5 EESLAILRRHVMNELLDTERAYVEELLCVLEGYAAEMDNPLMAHLISTGLQNKKNILFGNMEEIYHFHNRIFLRELESCI 84 (353)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGCTTTTTTSCHHHHHTHHHHHTTHHHHHHHHHHTHHHHHHTTT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCChhhhhhHHHHHhCHHHHHHHHHHHHHHHHHHHh
Confidence 35678899999999999999999999999999999998653 67666678999999999999999448999999999
Q ss_pred cCCCchHHHHhhhhhhhhhHHHhhhchHHHHHHHHHHh-HHHHHHHHHhhcCCCChhhhhhhhHhhHHhhHHHHHHHHhc
Q psy9950 369 NLPLSVGQCFLNHENKFYLYALYNKNKPKSDALMTEYG-SSFFKAKQLELADRMDLASYLLKPVQRMGKYALLLQQLMKA 447 (732)
Q Consensus 369 ~~~~~Ig~iFl~~~~~f~~Y~~Y~~n~~~a~~~L~~~~-~~ffk~~~~~l~~~l~L~slLikPVQRI~rY~LLLkeLlK~ 447 (732)
.++..||++|+++.+.|++|..||.|++.|..+++++. +.||+.++...+++++|.+||++|||||+||+|||++|+|+
T Consensus 85 ~~~~~ig~~fl~~~~~f~~Y~~Y~~n~~~a~~~l~~~~~~~f~~~~~~~~~~~l~L~~~Li~PvQRi~rY~LLL~~llk~ 164 (353)
T 1kz7_A 85 DCPELVGRCFLERMEEFQIYEKYCQNKPRSESLWRQCSDCPFFQECQKKLDHKLSLDSYLLKPVQRITKYQLLLKEMLKY 164 (353)
T ss_dssp TCGGGHHHHHHTTTTGGGHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTCSSCHHHHHTHHHHHHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHhhHHHHHHHHHHhChHHHHHHHHHhhcchHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 98999999999999999999999999999999999886 58999998888999999999999999999999999999999
Q ss_pred Cc--ccHHHHHHHHHHHHHHhhhhhhHhhhhhhccccccccccccccccccEEEEeCC--C----------CeeEEEEEc
Q psy9950 448 SR--QDVKDIKEAESMVRFQLRHGNDLLAMDSLRECDVNLKEQGRLLRQNEFIVSQGK--G----------KKCLRHVFL 513 (732)
Q Consensus 448 T~--~d~~dL~~Al~~v~~~~~~iNd~~~~~~i~~~~~~L~~~grll~~g~l~v~~~~--~----------kk~~r~vFL 513 (732)
|+ +|+.+|++|+++|+.++.++|+.+....|++++.+|...|++|++|.+.+|.+. | +.++||+||
T Consensus 165 t~~~~d~~~L~~Al~~i~~v~~~iN~~~~~~~i~~~~~~L~~~g~ll~~g~l~~~~~~~~g~~~~k~~~~~k~~~r~~fL 244 (353)
T 1kz7_A 165 SKHCEGAEDLQEALSSILGILKAVNDSMHLIAITGYDGNLGDLGKLLMQGSFSVWTDHKKGHTKVKELARFKPMQRHLFL 244 (353)
T ss_dssp CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHTTEESCCSCGGGGCCEEEEEEEEEEECCCCC-----CCCSSSCEEEEEEE
T ss_pred cCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHhhhhheecceEEEecCccccchhhhhhccCcceeEEEE
Confidence 98 688999999999999999999999988999999999999999999999998642 2 457999999
Q ss_pred cCCeEEEEEeeeCCCC--CCCcceEEeeeeeecceEEEEecCCCCCcEEEEEeecCCCeEEEEEcCCHHHHHHHHHHHHH
Q psy9950 514 FEELILFSKARRFPDR--KNLDLYIYKHSMKMSDIGITAQIGDSSTKFEIWFRKRKPNETFTLQSMSEDIKQAWTDELSN 591 (732)
Q Consensus 514 F~D~LL~~K~kk~~~~--~~~~~y~~K~~i~l~~i~v~e~~~~~~~~F~I~~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~ 591 (732)
|+|+||+||+++..+. .....|.||..|++.++.+++..+++++.|.||+. ++...|+|+|.|+++|+.|+++|++
T Consensus 245 F~d~Ll~~k~~~~~~~~~~~~~~y~~k~~i~l~~~~v~e~~~~~~~~F~i~~~--~~~~~~~l~a~s~~ek~~W~~~i~~ 322 (353)
T 1kz7_A 245 HEKAVLFCKKREENGEGYEKAPSYSYKQSLNMTAVGITENVKGDTKKFEIWYN--AREEVYIIQAPTPEIKAAWVNAIRK 322 (353)
T ss_dssp ESSEEEEEEEECCCCSSCCCSCEEEEEEEEEGGGEEEECCBTTBTTEEEEEET--TTTEEEEEECSSHHHHHHHHHHHHH
T ss_pred ECCEEEEEEeccccccCCCCCCeEEEEEEeEcccceeeEcCCCCCceEEEEEC--CCCcEEEEECCCHHHHHHHHHHHHH
Confidence 9999999999852111 12368999999999999999988888899999974 3468999999999999999999999
Q ss_pred HHHHHHHHhHH
Q psy9950 592 LLWKQALRNRA 602 (732)
Q Consensus 592 ~i~~q~~~~r~ 602 (732)
+|+++...-++
T Consensus 323 ai~~~~~~~r~ 333 (353)
T 1kz7_A 323 VLTSQLQACRE 333 (353)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhhc
Confidence 99988765443
No 3
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Probab=100.00 E-value=3.6e-52 Score=454.79 Aligned_cols=304 Identities=33% Similarity=0.621 Sum_probs=273.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhhhHHHHhCCHHHHHHHHHHH-HHHHHHHHhcCCC
Q psy9950 294 LKTQKNLLFIMREMIQTERDYVKSLEYVILNYIPELTREDIPQALRGQRNVIFGNIEKIYEFHSQH-FLGELEQCANLPL 372 (732)
Q Consensus 294 ~k~~~kRq~iI~ELi~TE~~YV~~L~~l~~~y~~pL~~~~~p~~l~~~~~~IF~NIe~I~~~Hs~~-fL~~Le~~~~~~~ 372 (732)
.|..+||++||+||++||++||++|+.++++|+.||....+|..+.+++..||+||++|+++| .. ||.+|+.+..++.
T Consensus 7 ~k~~~kR~~vi~ELi~TE~~Yv~~L~~l~~~y~~~l~~~~~p~~l~~~~~~iF~ni~~I~~~h-~~~fl~~L~~~~~~~~ 85 (354)
T 2rgn_B 7 KKALERSMYVLSELVETEKMYVDDLGQIVEGYMATMAAQGVPESLRGRDRIVFGNIQQIYEWH-RDYFLQELQRCLKDPD 85 (354)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHCCCSSSGGGHHHHHTTHHHHHHHH-HHTHHHHHHHHHSCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhHHHHhhCHHHHHHHH-HHHHHHHHHHHHcCHH
Confidence 356789999999999999999999999999999999987777766678899999999999999 57 9999999999999
Q ss_pred chHHHHhhhhhhhhhHHHhhhchHHHHHHHHHHhHHHHHHHHHhhcCCCChhhhhhhhHhhHHhhHHHHHHHHhcCc---
Q psy9950 373 SVGQCFLNHENKFYLYALYNKNKPKSDALMTEYGSSFFKAKQLELADRMDLASYLLKPVQRMGKYALLLQQLMKASR--- 449 (732)
Q Consensus 373 ~Ig~iFl~~~~~f~~Y~~Y~~n~~~a~~~L~~~~~~ffk~~~~~l~~~l~L~slLikPVQRI~rY~LLLkeLlK~T~--- 449 (732)
.||++|+++.+.|++|..||.|++.|..++.++.+.||+.++...+++++|.+||++|||||+||+|||++|+|+|+
T Consensus 86 ~ig~~fl~~~~~f~~Y~~Y~~n~~~a~~~l~~~~~~~f~~~~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~llk~t~~~~ 165 (354)
T 2rgn_B 86 WLAQLFIKHERRLHMYVVYCQNKPKSEHVVSEFGDSYFEELRQQLGHRLQLNDLLIKPVQRIMKYQLLLKDFLKYYNRAG 165 (354)
T ss_dssp GHHHHHHHTTTTTHHHHHHHHTSHHHHHHHTTTSHHHHHHHHHHHCCSSCHHHHTTHHHHHHTSHHHHHHHHHHHTSSSC
T ss_pred HHHHHHHHhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHhhhHHHHHhHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999999999999888899999888899999999999999999999999999999998
Q ss_pred ccHHHHHHHHHHHHHHhhhhhhHhhhhhhccccccccccccccccccEEEEeCC------CCeeEEEEEccCCeEEEEEe
Q psy9950 450 QDVKDIKEAESMVRFQLRHGNDLLAMDSLRECDVNLKEQGRLLRQNEFIVSQGK------GKKCLRHVFLFEELILFSKA 523 (732)
Q Consensus 450 ~d~~dL~~Al~~v~~~~~~iNd~~~~~~i~~~~~~L~~~grll~~g~l~v~~~~------~kk~~r~vFLF~D~LL~~K~ 523 (732)
+|+.+|++|+++|+.++.++|+.+.+..|+++...+...|+++.+|.+.|+.+. ++.++||+|||+|+|||||+
T Consensus 166 ~d~~~l~~Al~~i~~v~~~in~~~~~~~i~~~~~~l~~~~~Ll~~g~~~v~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~ 245 (354)
T 2rgn_B 166 MDTADLEQAVEVMCFVPKRCNDMMTLGRLRGFEGKLTAQGKLLGQDTFWVTEPEAGGLLSSRGRERRVFLFEQIIIFSEA 245 (354)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHGGGCBSCCSCSTTSCCEEEEEEEEEECC-------CCCCEEEEEEESSEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhhccccccceEEEEcCCcCccccCCCceEEEEEeCCcEEEEEe
Confidence 578889999999999999999999999999999999999999999999998753 35679999999999999998
Q ss_pred eeCCC-CCCCcceEEeeeeeecceEEEEecCCCCCcEEEEEeecC-CCeEEEEEcCCHHHHHHHHHHHHHHHHHHHH
Q psy9950 524 RRFPD-RKNLDLYIYKHSMKMSDIGITAQIGDSSTKFEIWFRKRK-PNETFTLQSMSEDIKQAWTDELSNLLWKQAL 598 (732)
Q Consensus 524 kk~~~-~~~~~~y~~K~~i~l~~i~v~e~~~~~~~~F~I~~~~~~-~~~~~~L~A~S~eeK~~Wi~~I~~~i~~q~~ 598 (732)
++... +.....|+||..|++.++.|++..+++++.|.|++.... +...|+|+|.|.++|+.|+++|+++|++|+.
T Consensus 246 ~~~~~~~~~~~~y~~k~~i~l~~~~v~~~~~~~~~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~~ 322 (354)
T 2rgn_B 246 LGGGVRGGTQPGYVYKNSIKVSCLGLEGNLQGDPCRFALTSRGPEGGIQRYVLQAADPAISQAWIKHVAQILESQRD 322 (354)
T ss_dssp CC--------CCEEEEEEEEGGGEEEEESGGGCTTEEEEEEECSSSCEEEEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCCCceEEcceeeccceeeeeccCCCCceEEEEecCCCCCceEEEEECCCHHHHHHHHHHHHHHHHHHHH
Confidence 74211 112357999999999999999988888899999986433 4579999999999999999999999998754
No 4
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=100.00 E-value=1.8e-47 Score=444.01 Aligned_cols=346 Identities=21% Similarity=0.320 Sum_probs=263.5
Q ss_pred ccccccCCCCC-CcccccccccC-CCCCCCCCCCCCCCcccC-------CCCCCCCCCCCCCcccccccccccccccCCC
Q psy9950 216 RSCTWQYPTEN-YDEEEDKVSSV-DNTTEGSDTGKSGEECCE-------EPSENSLSKPMPPVSVNSHLHYSQLSLDLDS 286 (732)
Q Consensus 216 ~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (732)
..|+.+||.++ ...++++|++| +.+++..+.+++.|+|+. ++|++.++...+++
T Consensus 126 ~~g~~~fp~~~~~~~~~~~y~~l~~~~~~~~~~~e~~y~~~~~~~~~~~~i~e~l~~~~~~~~----------------- 188 (587)
T 3ky9_A 126 NRGIMPFPTEEESVGDEDIYSGLSDQIDDTVEEDEDLYDCVENEEAEGDEIYEDLMRSEPVSM----------------- 188 (587)
T ss_dssp GGTCCCC------------CTTHHHHHCC-----TTGGGGSCCTTHHHHHHHHHHHCC----------------------
T ss_pred ccCCCCCCCcccccchHHHHHhHHHHHhccccccccccCccCcccccchhhHHHHHHcccCCC-----------------
Confidence 34678899887 57889999999 566666667788898852 23333332222111
Q ss_pred ccCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhhhHHHHhCCHHHHHHHHHHHHHHHHHH
Q psy9950 287 ASCGVQTLKTQKNLLFIMREMIQTERDYVKSLEYVILNYIPELTREDIPQALRGQRNVIFGNIEKIYEFHSQHFLGELEQ 366 (732)
Q Consensus 287 ~~~~~~~~k~~~kRq~iI~ELi~TE~~YV~~L~~l~~~y~~pL~~~~~p~~l~~~~~~IF~NIe~I~~~Hs~~fL~~Le~ 366 (732)
.+..+..+||++||+||++||+.||++|+.++++|+.||.+ .++ ..++..||+||++|+.+| +.||.+|+.
T Consensus 189 ----~~~~~~~~kR~~vi~ELi~TE~~Yv~~L~~l~~~y~~~L~~-~l~---~~~~~~iF~ni~~I~~~h-~~fL~~L~~ 259 (587)
T 3ky9_A 189 ----PPKMTEYDKRCCCLREIQQTEEKYTDTLGSIQQHFLKPLQR-FLK---PQDIEIIFINIEDLLRVH-THFLKEMKE 259 (587)
T ss_dssp -------CCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHT-TSC---TTTSHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred ----CcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCC---HHHHHHHHhcHHHHHHHH-HHHHHHHHH
Confidence 11234567899999999999999999999999999999985 222 356899999999999999 699999999
Q ss_pred HhcC--CCchHHHHhhhhhhhhhHHHhhhchHHHHHHHHHHh------HHHHHHHHH-hhcCCCChhhhhhhhHhhHHhh
Q psy9950 367 CANL--PLSVGQCFLNHENKFYLYALYNKNKPKSDALMTEYG------SSFFKAKQL-ELADRMDLASYLLKPVQRMGKY 437 (732)
Q Consensus 367 ~~~~--~~~Ig~iFl~~~~~f~~Y~~Y~~n~~~a~~~L~~~~------~~ffk~~~~-~l~~~l~L~slLikPVQRI~rY 437 (732)
+... ...||++|+++.+.|++|..||.|++.|..+++++. ..|++.++. ..+++++|.+||++|||||+||
T Consensus 260 ~~~~~~~~~ig~if~~~~~~f~~Y~~Y~~n~~~a~~~l~~~~~~~~~f~~~l~~~~~~~~~~~l~L~s~Li~PvQRi~rY 339 (587)
T 3ky9_A 260 ALGTPGAANLYQVFIKYKERFLVYGRYCSQVESASKHLDRVAAAREDVQMKLEECSQRANNGRFTLRDLLMVPMQRVLKY 339 (587)
T ss_dssp HHHSSTTCSHHHHHHHTTTGGGHHHHHHHHHHHHHHHHHHHHHTCHHHHTTTTHHHHHHHSSSCCHHHHHHHHHHHHTTH
T ss_pred HHhccCccHHHHHHHHHHHhcchHHHHHhChHHHHHHHHHHHhcCHHHHHHHHHHHhccccCCCCHHHHHhHHHHHHHHH
Confidence 9876 468999999999999999999999999999999875 234445443 3478999999999999999999
Q ss_pred HHHHHHHHhcCc--ccHHHHHHHHHHHHHHhhhhhhHhh-----------hhhhccccccccccccccccccEEEEeCC-
Q psy9950 438 ALLLQQLMKASR--QDVKDIKEAESMVRFQLRHGNDLLA-----------MDSLRECDVNLKEQGRLLRQNEFIVSQGK- 503 (732)
Q Consensus 438 ~LLLkeLlK~T~--~d~~dL~~Al~~v~~~~~~iNd~~~-----------~~~i~~~~~~L~~~grll~~g~l~v~~~~- 503 (732)
+|||++|+|+|+ +|+.+|+.|++.|+.++.++|+.+. ...|.++...+...||++++|.+.++...
T Consensus 340 ~LLL~~Llk~T~~~~d~~~L~~Al~~i~~v~~~iNe~~r~~e~~~~l~~lq~~i~~~~~~l~~~grll~~G~l~~~~~~~ 419 (587)
T 3ky9_A 340 HLLLQELVKHTQEAMEKENLRLALDAMRDLAQCVNEVKRDNETLRQITNFQLSIENLDQSLAHYGRPKIDGELKITSVER 419 (587)
T ss_dssp HHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEETCCSCGGGGCCEEEEEEEEEECSSC
T ss_pred HHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhhcCceEEEeeEEEEeccC
Confidence 999999999998 6778899999999999999998543 13456667788899999999999987654
Q ss_pred CCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecCCC------CCcEEEEEeecCCCeEEEEEcC
Q psy9950 504 GKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGDS------STKFEIWFRKRKPNETFTLQSM 577 (732)
Q Consensus 504 ~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~~------~~~F~I~~~~~~~~~~~~L~A~ 577 (732)
++.++||+|||+|+|||||++ ...|.|+..|+|.++.|.+..+++ .+.|.|+. ..+..+|+|+|.
T Consensus 420 ~~~~~r~~fLF~d~Ll~~k~~-------~~~y~~k~~i~L~~~~v~~~~~~~~~~~~~~~~f~i~~--~~~~~~~~L~A~ 490 (587)
T 3ky9_A 420 RSKMDRYAFLLDKALLICKRR-------GDSYDLKDFVNLHSFQVRDDSSGDRDNKKWSHMFLLIE--DQGAQGYELFFK 490 (587)
T ss_dssp CSCEEEEEEEETTEEEEEEEE-------TTEEEEEEEEEGGGEEEEEC-----CCCTTCEEEEEEE--TTC---CEEEES
T ss_pred CCcceEEEEEECCEEEEEEec-------CCEEEeeeeechhhceeeecCCCCcccccccceeEEEE--cCCCceEEEEeC
Confidence 467899999999999999987 237999999999999999876542 23466553 344579999999
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q psy9950 578 SEDIKQAWTDELSNLLWKQ 596 (732)
Q Consensus 578 S~eeK~~Wi~~I~~~i~~q 596 (732)
|.++|+.|+++|+++|++.
T Consensus 491 S~eeK~~Wi~~I~~ai~~~ 509 (587)
T 3ky9_A 491 TRELKKKWMEQFEMAISNI 509 (587)
T ss_dssp SHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhhh
Confidence 9999999999999998653
No 5
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=100.00 E-value=1e-45 Score=410.46 Aligned_cols=305 Identities=24% Similarity=0.397 Sum_probs=253.1
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCCchhhhhhHHHHhCCHHHHHHHHHHHHHHHHHHHhc
Q psy9950 291 VQTLKTQKNLLFIMREMIQTERDYVKSLEYVILNYIPELTR-EDIPQALRGQRNVIFGNIEKIYEFHSQHFLGELEQCAN 369 (732)
Q Consensus 291 ~~~~k~~~kRq~iI~ELi~TE~~YV~~L~~l~~~y~~pL~~-~~~p~~l~~~~~~IF~NIe~I~~~Hs~~fL~~Le~~~~ 369 (732)
.+..+++.+|++||+||++||+.||++|+.++++|+.||.. ..+.. .+++..||+||++|+.+| ..||.+|+.+..
T Consensus 33 ~~~~~~~~kR~~vi~ELl~TE~~Yv~~L~~l~~~y~~pl~~~~~~l~--~~~~~~iF~ni~~I~~~h-~~fL~~Le~~~~ 109 (402)
T 2dfk_A 33 RPLQNRDQMRANVINEIMSTERHYIKHLKDICEGYLKQCRKRRDMFS--DEQLKVIFGNIEDIYRFQ-MGFVRDLEKQYN 109 (402)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHCTTTCC--HHHHHHHHTTHHHHHHHH-HHHHHHHHHHCC
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCCC--HHHHHHHHhcHHHHHHHH-HHHHHHHHHHHc
Confidence 34456788999999999999999999999999999999974 23322 468999999999999999 689999999986
Q ss_pred CC----CchHHHHhhhhhhhhhHHHhhhchHHHHHHHHHHh-----HHHHHHHHH-hhcCCCChhhhhhhhHhhHHhhHH
Q psy9950 370 LP----LSVGQCFLNHENKFYLYALYNKNKPKSDALMTEYG-----SSFFKAKQL-ELADRMDLASYLLKPVQRMGKYAL 439 (732)
Q Consensus 370 ~~----~~Ig~iFl~~~~~f~~Y~~Y~~n~~~a~~~L~~~~-----~~ffk~~~~-~l~~~l~L~slLikPVQRI~rY~L 439 (732)
.+ ..||+||+++.+.|++|..||.|++.|...|.++. ..|++.++. ..+.+++|.+||++|||||+||+|
T Consensus 110 ~~~~~~~~ig~ifl~~~~~f~~Y~~Y~~n~~~a~~~l~~~~~~~~f~~fl~~~~~~~~~~~l~L~s~Li~PvQRi~rY~L 189 (402)
T 2dfk_A 110 NDDPHLSEIGPCFLEHQDGFWIYSEYCNNHLDACMELSKLMKDSRYQHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPL 189 (402)
T ss_dssp SSCGGGCCCHHHHHHTTTGGGHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHTTCCSCCHHHHHTHHHHHHHHHHH
T ss_pred cCCCchhhHHHHHHHHHhhhHHHHHHHHhhHHHHHHHHHHHcChHHHHHHHHHHhhhhcccCCHHHHHhHHHHHHHHHHH
Confidence 53 47999999999999999999999999999998875 466776654 346789999999999999999999
Q ss_pred HHHHHHhcCc---ccHHHHHHHHHHHHHHhhhhhhHhhh-----------hhhccccc-c-ccccccccccccEEEEeC-
Q psy9950 440 LLQQLMKASR---QDVKDIKEAESMVRFQLRHGNDLLAM-----------DSLRECDV-N-LKEQGRLLRQNEFIVSQG- 502 (732)
Q Consensus 440 LLkeLlK~T~---~d~~dL~~Al~~v~~~~~~iNd~~~~-----------~~i~~~~~-~-L~~~grll~~g~l~v~~~- 502 (732)
||++|+|+|+ +|+.+|++|+++|+.++.++|+.+.. ..|.++.. + +...|+||++|.+.+..+
T Consensus 190 LL~~Llk~t~~~~~d~~~L~~Al~~i~~v~~~iNe~~r~~e~~~~l~~lq~~i~~~~~~~l~~~~r~Li~~G~l~~~~~~ 269 (402)
T 2dfk_A 190 QLAELLKYTAQDHSDYRYVAAALAVMRNVTQQINERKRRLENIDKIAQWQASVLDWEGDDILDRSSELIYTGEMAWIYQP 269 (402)
T ss_dssp HHHHHHHTSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSBTCCSSCGGGTCCCEEEEEEEEEESST
T ss_pred HHHHHHhhCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccccceEEeceEEEEecc
Confidence 9999999999 56788999999999999999985431 23344432 2 356789999999988766
Q ss_pred CCCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecCCC--------CCcEEEEEeecCCCeEEEE
Q psy9950 503 KGKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGDS--------STKFEIWFRKRKPNETFTL 574 (732)
Q Consensus 503 ~~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~~--------~~~F~I~~~~~~~~~~~~L 574 (732)
.|+.++||+|||+|+|||||++. .+...|.|+..|++.++.|++..+++ .+.|.|+.. .+.+.|+|
T Consensus 270 ~~k~~~r~~fLF~d~Ll~~k~~~----~~~~~~~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~~--~~~~~~~l 343 (402)
T 2dfk_A 270 YGRNQQRVFFLFDHQMVLCKKDL----IRRDILYYKGRIDMDKYEVIDIEDGRDDDFNVSMKNAFKLHNK--ETEEVHLF 343 (402)
T ss_dssp TCCCEEEEEEEETTEEEEEEECS----SCTTCEEEEEEEEGGGEEEEECCSEECSSSCCEESSEEEEEES--SSSCEEEE
T ss_pred CCceEEEEEEeeCCEEEEEEecc----ccCCceEEeeeeeccceEEEecCCCCccccccccceeEEEEEC--CCCeEEEE
Confidence 46778999999999999999863 23457999999999999999865542 256777653 34679999
Q ss_pred EcCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCC
Q psy9950 575 QSMSEDIKQAWTDELSNLLWKQALRNRAMRLQEMSSMGI 613 (732)
Q Consensus 575 ~A~S~eeK~~Wi~~I~~~i~~q~~~~r~~rl~e~~~~gi 613 (732)
+|+|+++|+.|+++|++++ .+++++..+|+
T Consensus 344 ~a~s~~eK~~Wi~~i~~a~---------~~~~~~~~~g~ 373 (402)
T 2dfk_A 344 FAKKLEEKIRWLRAFREER---------KMVQEDEKIGF 373 (402)
T ss_dssp ECSSHHHHHHHHHHHHHHH---------HHHHHHHHHTC
T ss_pred EeCCHHHHHHHHHHHHHHH---------HHHHhhhhcCC
Confidence 9999999999999999986 23566667765
No 6
>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}
Probab=100.00 E-value=1.3e-45 Score=411.27 Aligned_cols=298 Identities=16% Similarity=0.265 Sum_probs=243.5
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhhhHHHHhCCHHHHHHHHHHHHHHHHHHHhcCC
Q psy9950 292 QTLKTQKNLLFIMREMIQTERDYVKSLEYVILNYIPELTREDIPQALRGQRNVIFGNIEKIYEFHSQHFLGELEQCANLP 371 (732)
Q Consensus 292 ~~~k~~~kRq~iI~ELi~TE~~YV~~L~~l~~~y~~pL~~~~~p~~l~~~~~~IF~NIe~I~~~Hs~~fL~~Le~~~~~~ 371 (732)
...+++.+|++||+|||+||+.||++|+.++++|+.||....+.. ..++..||+||++|+++| +.||.+|+.+...+
T Consensus 56 ~l~~~e~kR~~vi~ELi~TE~~Yv~~L~~l~~~y~~~l~~~~~l~--~~~~~~iF~ni~~I~~~h-~~fl~~L~~~~~~~ 132 (418)
T 3t06_A 56 GLTQREIDRQEVINELFVTEASHLRTLRVLDLIFYQRMKKENLMP--REELARLFPNLPELIEIH-NSWCEAMKKLREEG 132 (418)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTSSC--HHHHHHHSSSHHHHHHHH-HHHHHHHHHHGGGC
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC--HHHHHHHHccHHHHHHHH-HHHHHHHHHHHhcC
Confidence 346788999999999999999999999999999999999765443 367999999999999999 68999999998765
Q ss_pred ---CchHHHHhhhhhh------hhhHHHhhhchHHHHHHHHHHh------HHHHHHHHHh-hcCCCChhhhhhhhHhhHH
Q psy9950 372 ---LSVGQCFLNHENK------FYLYALYNKNKPKSDALMTEYG------SSFFKAKQLE-LADRMDLASYLLKPVQRMG 435 (732)
Q Consensus 372 ---~~Ig~iFl~~~~~------f~~Y~~Y~~n~~~a~~~L~~~~------~~ffk~~~~~-l~~~l~L~slLikPVQRI~ 435 (732)
..||++|+++++. |.+|..||.|++.|.+++.++. ..|++.++.. .+++++|.+||++|||||+
T Consensus 133 ~~~~~ig~ifl~~~~~~~~~~~~~~Y~~Y~~n~~~a~~~l~~~~~~~~~f~~fl~~~~~~~~~~~l~L~s~Li~PvQRi~ 212 (418)
T 3t06_A 133 PIIKEISDLMLARFDGPAREELQQVAAQFCSYQSIALELIKTKQRKESRFQLFMQEAESHPQCRRLQLRDLIISEMQRLT 212 (418)
T ss_dssp SSCCCCHHHHHHHHSTHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHHTTSGGGTTCCHHHHTTHHHHHHH
T ss_pred CCcCcHHHHHHHhcchhhhHHHhhhhHHHhhhHHHHHHHHHHHHhcCHHHHHHHHHHHhCcccccCCHHHHHhhHHHHHH
Confidence 3899999998765 4899999999999999998875 3555555543 4679999999999999999
Q ss_pred hhHHHHHHHHhcCc---ccHHHHHHHHHHHHHHhhhhhhHhhhh----hhccccccc--------------------ccc
Q psy9950 436 KYALLLQQLMKASR---QDVKDIKEAESMVRFQLRHGNDLLAMD----SLRECDVNL--------------------KEQ 488 (732)
Q Consensus 436 rY~LLLkeLlK~T~---~d~~dL~~Al~~v~~~~~~iNd~~~~~----~i~~~~~~L--------------------~~~ 488 (732)
||+|||++|+|+|+ +|+.+|++|++.|+.++.++|+.+... .+.++...+ ...
T Consensus 213 rY~LLL~~llk~t~~~~~d~~~L~~A~~~i~~v~~~iN~~~~~~e~~~~l~~i~~~l~~~~~~~~~~~~~~~~~~l~~~~ 292 (418)
T 3t06_A 213 KYPLLLESIIKHTEGGTSEHEKLCRARDQCREILKYVNEAVKQTENRHRLEGYQKRLDATALERASNPLAAEFKSLDLTT 292 (418)
T ss_dssp HHHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSEECCTTSSCSCTTTTTTSSCCGGG
T ss_pred HHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccccccchhhccccccc
Confidence 99999999999999 467789999999999999999866421 122222111 234
Q ss_pred ccccccccEEEEeCCCCeeEEEEEccCCeEEEEEeeeCCC----------CCCCcceEEeeeeeecceEEEEecCCCCCc
Q psy9950 489 GRLLRQNEFIVSQGKGKKCLRHVFLFEELILFSKARRFPD----------RKNLDLYIYKHSMKMSDIGITAQIGDSSTK 558 (732)
Q Consensus 489 grll~~g~l~v~~~~~kk~~r~vFLF~D~LL~~K~kk~~~----------~~~~~~y~~K~~i~l~~i~v~e~~~~~~~~ 558 (732)
|++|++|.+.+..++++.++||+|||+|+|||||++..+. ......|.|+..|+|.++.|++. .++...
T Consensus 293 r~li~eG~l~~~~~~~~~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~k~~i~l~~~~v~~~-~~~~~~ 371 (418)
T 3t06_A 293 RKMIHEGPLTWRISKDKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSV-ATDKRA 371 (418)
T ss_dssp SCEEEEEEEEECCBTTBCCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGGEEEEEC-SSCSSE
T ss_pred ceeEEeceEEEEeCCCCeEEEEEEecCCEEEEEEEcCCceEEeecccccccCCCcccccCCceechhceeccc-cccCce
Confidence 8899999999877677788999999999999999863110 11223688999999999999964 566788
Q ss_pred EEEEEeecC-CCeEEEEEcCCHHHHHHHHHHHHHHH
Q psy9950 559 FEIWFRKRK-PNETFTLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 559 F~I~~~~~~-~~~~~~L~A~S~eeK~~Wi~~I~~~i 593 (732)
|.||+.... +.+.|+|+|.|.++|+.|+++|++++
T Consensus 372 f~l~~~~~~~~~~~~~l~A~s~~ek~~W~~~I~~a~ 407 (418)
T 3t06_A 372 FFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAV 407 (418)
T ss_dssp EEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCCCceEEEEEcCCHHHHHHHHHHHHHHH
Confidence 999886433 34899999999999999999999997
No 7
>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A
Probab=100.00 E-value=5.5e-46 Score=404.36 Aligned_cols=292 Identities=20% Similarity=0.303 Sum_probs=235.0
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhhhHHHHhCCHHHHHHHHHHHHHHHHHHHhcCC-
Q psy9950 293 TLKTQKNLLFIMREMIQTERDYVKSLEYVILNYIPELTREDIPQALRGQRNVIFGNIEKIYEFHSQHFLGELEQCANLP- 371 (732)
Q Consensus 293 ~~k~~~kRq~iI~ELi~TE~~YV~~L~~l~~~y~~pL~~~~~p~~l~~~~~~IF~NIe~I~~~Hs~~fL~~Le~~~~~~- 371 (732)
-.+.+.+|++||+||++||++||++|+.++++|+.||....+.. .+++..||+||++|+++| +.||.+|+.+...+
T Consensus 13 l~~~~~kR~~vi~Eli~TE~~Yv~~L~~l~~~y~~~l~~~~~l~--~~~~~~iF~ni~~i~~~h-~~fl~~L~~~~~~~~ 89 (346)
T 2z0q_A 13 LTAKEIKRQEAIFELSQGEEDLIEDLKLAKKAYHDPMLKLSIMT--EQELNQIFGTLDSLIPLH-EELLSQLRDVRKPDG 89 (346)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTSSC--HHHHHHHHTTHHHHHHHH-HHHHHHHHHHCCTTS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC--HHHHHHHhccHHHHHHHH-HHHHHHHHHHhccCC
Confidence 35678899999999999999999999999999999998764332 367999999999999999 68999999998754
Q ss_pred --CchHHHHhhhhhhhhhHHHhhhchHHHHHHHHHHh-----HHHHHHHH-HhhcCCCChhhhhhhhHhhHHhhHHHHHH
Q psy9950 372 --LSVGQCFLNHENKFYLYALYNKNKPKSDALMTEYG-----SSFFKAKQ-LELADRMDLASYLLKPVQRMGKYALLLQQ 443 (732)
Q Consensus 372 --~~Ig~iFl~~~~~f~~Y~~Y~~n~~~a~~~L~~~~-----~~ffk~~~-~~l~~~l~L~slLikPVQRI~rY~LLLke 443 (732)
..||++|+++++.|++|..||.||+.|..+++++. ..|++.++ ...+++++|.+||++|||||+||+|||++
T Consensus 90 ~~~~ig~~f~~~~~~~~~Y~~Y~~n~~~a~~~l~~~~~~~~f~~fl~~~~~~~~~~~l~L~~~L~~PvQRi~rY~LLL~~ 169 (346)
T 2z0q_A 90 STEHVGPILVGWLPCLSSYDSYCSNQVAAKALLDHKKQDHRVQDFLQRCLESPFSRKLDLWNFLDIPRSRLVKYPLLLRE 169 (346)
T ss_dssp CCSCCHHHHHHHGGGGGHHHHHHHHHHHHHHHHHHHTTCHHHHCC-------------CTTTGGGHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHhhHHHHHHHHHHCHHHHHHHHHHhhcCHHHHHHHHHHHhCccCCCCCHHHHHHHHHHHHhhHHHHHHH
Confidence 47999999999999999999999999999999875 35666665 34678999999999999999999999999
Q ss_pred HHhcCc---ccHHHHHHHHHHHHHHhhhhhhHhhhh-------hhc----ccccccc-ccccccccccEEEEeCCCCeeE
Q psy9950 444 LMKASR---QDVKDIKEAESMVRFQLRHGNDLLAMD-------SLR----ECDVNLK-EQGRLLRQNEFIVSQGKGKKCL 508 (732)
Q Consensus 444 LlK~T~---~d~~dL~~Al~~v~~~~~~iNd~~~~~-------~i~----~~~~~L~-~~grll~~g~l~v~~~~~kk~~ 508 (732)
|+|+|+ +|+.+|++|+++|+.++.++|+.+... .++ ++...+. ..+.++++|.+... +.++
T Consensus 170 llk~t~~~~~d~~~l~~A~~~~~~v~~~iN~~~~~~e~~~~~~~l~~~~~~~~~~l~~~~r~li~~G~l~~~----~~~~ 245 (346)
T 2z0q_A 170 ILRHTPNDNPDQQHLEEAINIIQGIVAEINTKTGESECRYYKERLLYLEEGQKDSLIDSSRVLCCHGELKNN----RGVK 245 (346)
T ss_dssp HHHTSCTTSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCSTTCCCHHHHTCCCEEEEEEEEET----TSCE
T ss_pred HHhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCccccCCeEEEEeceeEEC----CCcE
Confidence 999999 567789999999999999999976532 222 2222333 34567888887652 3479
Q ss_pred EEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecCC-----------------CCCcEEEEEeecCCCeE
Q psy9950 509 RHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGD-----------------SSTKFEIWFRKRKPNET 571 (732)
Q Consensus 509 r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~-----------------~~~~F~I~~~~~~~~~~ 571 (732)
+|+|||+|+||+||+++.. .+..+++||.+|++.++.|.+..++ ..+.|.|++..+.....
T Consensus 246 ~~~fLF~d~Ll~~k~~~~~--~~~~~~v~k~~i~l~~l~v~~~~d~~~~~~~s~~g~~~~~~~~~~~F~i~~~~~~~~~~ 323 (346)
T 2z0q_A 246 LHVFLFQEVLVITRAVTHN--EQLCYQLYRQPIPVKDLTLEDLQDGEVRLGGSLRGAFSNNERVKNFFRVSFKNGSQSQT 323 (346)
T ss_dssp EEEEEESSEEEEEEEEEET--TEEEEEESSCCEEGGGCEEEECCTTTSCCCSCC--CCSHHHHTSSEEEEEECCGGGCEE
T ss_pred EEEEECCCcEEEEEEeccC--CceeeeeecCCcchhhceeeecCCCccccCccccccccCCcccccceEEEEecCCCCce
Confidence 9999999999999987521 1223456899999999999987643 24679999876566789
Q ss_pred EEEEcCCHHHHHHHHHHHHHHH
Q psy9950 572 FTLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 572 ~~L~A~S~eeK~~Wi~~I~~~i 593 (732)
|+|+|+|+++|+.|+++|++++
T Consensus 324 ~~l~a~s~~ek~~W~~~i~~ai 345 (346)
T 2z0q_A 324 HSLQANDTFNKQQWLNCIRQAK 345 (346)
T ss_dssp EEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHHHhh
Confidence 9999999999999999999986
No 8
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=100.00 E-value=3.1e-45 Score=406.97 Aligned_cols=288 Identities=23% Similarity=0.357 Sum_probs=242.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhhhHHHHhCCHHHHHHHHHHHHHHHHHHHhcCC--
Q psy9950 294 LKTQKNLLFIMREMIQTERDYVKSLEYVILNYIPELTREDIPQALRGQRNVIFGNIEKIYEFHSQHFLGELEQCANLP-- 371 (732)
Q Consensus 294 ~k~~~kRq~iI~ELi~TE~~YV~~L~~l~~~y~~pL~~~~~p~~l~~~~~~IF~NIe~I~~~Hs~~fL~~Le~~~~~~-- 371 (732)
.+...||+.||+||++||++||++|+.++++|+.||.. .++ .+++..||+||++|+++| ..||.+|+++...|
T Consensus 20 ~~~~~kR~~vi~ELi~TE~~Yv~~L~~l~~~f~~~l~~-~l~---~~~~~~iF~ni~~i~~~h-~~fl~~L~~~~~~~~~ 94 (406)
T 2vrw_B 20 MTEYDKRCCCLREIQQTEEKYTDTLGSIQQHFMKPLQR-FLK---PQDMETIFVNIEELFSVH-THFLKELKDALAGPGA 94 (406)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTT-TSC---HHHHHHHHTTHHHHHHHH-HHHHHHHHHHHHSGGG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCC---HHHHHHHhcCHHHHHHHH-HHHHHHHHHHhcCCCc
Confidence 34568899999999999999999999999999999975 232 367899999999999999 69999999998754
Q ss_pred CchHHHHhhhhhhhhhHHHhhhchHHHHHHHHHHh------HHHHHHHHH-hhcCCCChhhhhhhhHhhHHhhHHHHHHH
Q psy9950 372 LSVGQCFLNHENKFYLYALYNKNKPKSDALMTEYG------SSFFKAKQL-ELADRMDLASYLLKPVQRMGKYALLLQQL 444 (732)
Q Consensus 372 ~~Ig~iFl~~~~~f~~Y~~Y~~n~~~a~~~L~~~~------~~ffk~~~~-~l~~~l~L~slLikPVQRI~rY~LLLkeL 444 (732)
..||++|+++.+.|++|..||.|++.|..+++++. ..|++.+.. ..+++++|.+||++|||||+||+|||++|
T Consensus 95 ~~ig~~f~~~~~~~~~Y~~Y~~n~~~a~~~l~~~~~~~~~f~~~l~~~~~~~~~~~l~L~~~Li~PvQRi~rY~LLL~~l 174 (406)
T 2vrw_B 95 TTLYQVFIKYKERFLVYGRYCSQVESASKHLDQVATAREDVQMKLEECSQRANNGRFTLRDLLMVPMQRVLKYHLLLQEL 174 (406)
T ss_dssp TTHHHHHHHHTTGGGHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTSCCHHHHTTHHHHHHTTHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhcCHHHHHHHHHHhhccccCCcchHHHhhhHHHHHhhHHHHHHHH
Confidence 58999999999999999999999999999998875 245555543 35789999999999999999999999999
Q ss_pred HhcCc--ccHHHHHHHHHHHHHHhhhhhhHhh-----------hhhhccccccccccccccccccEEEEeCC-CCeeEEE
Q psy9950 445 MKASR--QDVKDIKEAESMVRFQLRHGNDLLA-----------MDSLRECDVNLKEQGRLLRQNEFIVSQGK-GKKCLRH 510 (732)
Q Consensus 445 lK~T~--~d~~dL~~Al~~v~~~~~~iNd~~~-----------~~~i~~~~~~L~~~grll~~g~l~v~~~~-~kk~~r~ 510 (732)
+|+|+ +|+.+|++|++.|+.++.++|+.+. ...|++++..+..+|+++++|.+.++... +++++||
T Consensus 175 lk~t~~~~d~~~l~~Al~~i~~v~~~iNe~~r~~e~~~~l~~lq~~i~~~~~~l~~~grli~~G~l~~~~~~~~~~~~~~ 254 (406)
T 2vrw_B 175 VKHTQDATEKENLRLALDAMRDLAQCVNEVKRDNETLRQITNFQLSIENLDQSLANYGRPKIDGELKITSVERRSKTDRY 254 (406)
T ss_dssp HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEESCSSCGGGGCSEEEEEEEEEECSSCCSCEEEE
T ss_pred HHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCcccccccEEEEecCCCccceEE
Confidence 99994 4566789999999999999998553 13456677778889999999999988643 4568999
Q ss_pred EEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecCCC------CCcEEEEEeecCCCeEEEEEcCCHHHHHH
Q psy9950 511 VFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGDS------STKFEIWFRKRKPNETFTLQSMSEDIKQA 584 (732)
Q Consensus 511 vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~~------~~~F~I~~~~~~~~~~~~L~A~S~eeK~~ 584 (732)
+|||+|+||+||+++ ..|.||..|++..+.|.+..+++ .+.|.|+.. .+...|+|+|.|+++|+.
T Consensus 255 ~fLF~d~Ll~~k~k~-------~~y~~k~~i~l~~~~v~~~~~~~~~~~~~~~~F~i~~~--~~~~~~~l~a~s~~ek~~ 325 (406)
T 2vrw_B 255 AFLLDKALLICKRRG-------DSYDLKASVNLHSFQVRDDSSGERDNKKWSHMFLLIED--QGAQGYELFFKTRELKKK 325 (406)
T ss_dssp EEEESSEEEEEEEET-------TEEEEEEEEETTTEEEEC--------CTTCEEEEEEET--TCSCEEEEEESSHHHHHH
T ss_pred EEecCCEEEEEEecC-------CceEEEEEecccceeeeecCCCCccCCccceeeEEEec--CCCceEEEeCCCHHHHHH
Confidence 999999999999862 36999999999999998765443 356777643 456789999999999999
Q ss_pred HHHHHHHHHHH
Q psy9950 585 WTDELSNLLWK 595 (732)
Q Consensus 585 Wi~~I~~~i~~ 595 (732)
|+++|++++.+
T Consensus 326 W~~~i~~ai~~ 336 (406)
T 2vrw_B 326 WMEQFEMAISN 336 (406)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 99999999854
No 9
>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1
Probab=100.00 E-value=3.2e-45 Score=402.90 Aligned_cols=299 Identities=23% Similarity=0.390 Sum_probs=241.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhhhHHHHhCCHHHHHHHHHHHHHHHHHHHhcCC-----
Q psy9950 297 QKNLLFIMREMIQTERDYVKSLEYVILNYIPELTREDIPQALRGQRNVIFGNIEKIYEFHSQHFLGELEQCANLP----- 371 (732)
Q Consensus 297 ~~kRq~iI~ELi~TE~~YV~~L~~l~~~y~~pL~~~~~p~~l~~~~~~IF~NIe~I~~~Hs~~fL~~Le~~~~~~----- 371 (732)
..||++||+||++||++||++|+.++++|+.||....+.. .+++..||+||++|+++| ..||.+|+.+...+
T Consensus 9 ~~kr~~vi~Eli~TE~~Yv~~L~~l~~~y~~pl~~~~~l~--~~~~~~iF~ni~~I~~~h-~~fl~~L~~~~~~~~~~~~ 85 (377)
T 1foe_A 9 ADKLRKVICELLETERTYVKDLNCLMERYLKPLQKETFLT--QDELDVLFGNLTEMVEFQ-VEFLKTLEDGVRLVPDLEK 85 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHTSSSSC--HHHHHHHHSSHHHHHHHH-HHHHHHHHHHHTTSSCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC--HHHHHHHHhCHHHHHHHH-HHHHHHHHHHHhcCCcchh
Confidence 5689999999999999999999999999999998754332 468999999999999999 69999999987643
Q ss_pred -----------CchHHHHhhhhhhhhhHHHhhhchHHHHHHHHHHh-----HHHHHHHHHhhcCCCChhhhhhhhHhhHH
Q psy9950 372 -----------LSVGQCFLNHENKFYLYALYNKNKPKSDALMTEYG-----SSFFKAKQLELADRMDLASYLLKPVQRMG 435 (732)
Q Consensus 372 -----------~~Ig~iFl~~~~~f~~Y~~Y~~n~~~a~~~L~~~~-----~~ffk~~~~~l~~~l~L~slLikPVQRI~ 435 (732)
..||++|+++.+.|++|..||.||+.|...+.++. ..|++.++...+++++|.+||++|||||+
T Consensus 86 ~~~~~~~~~~~~~ig~~f~~~~~~f~~Y~~Y~~n~~~a~~~l~~~~~~~~f~~fl~~~~~~~~~~l~L~s~Li~PvQRi~ 165 (377)
T 1foe_A 86 LEKVDQFKKVLFSLGGSFLYYADRFKLYSAFCASHTKVPKVLVKAKTDTAFKAFLDAQNPRQQHSSTLESYLIKPIQRVL 165 (377)
T ss_dssp CCSGGGGHHHHHHHHHHHHHHTTGGGGHHHHHHHTTTHHHHHTTTTTCHHHHHHHHHHCTTCCGGGSHHHHTTHHHHHHT
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHhhccccCcCHHHHhccchhhhc
Confidence 25999999999999999999999999999997764 45666665555678999999999999999
Q ss_pred hhHHHHHHHHhcCcc---cHHHHHHHHHHHHHHhhhhhhHhhhhh---------h---ccc--cccccccccccccccEE
Q psy9950 436 KYALLLQQLMKASRQ---DVKDIKEAESMVRFQLRHGNDLLAMDS---------L---REC--DVNLKEQGRLLRQNEFI 498 (732)
Q Consensus 436 rY~LLLkeLlK~T~~---d~~dL~~Al~~v~~~~~~iNd~~~~~~---------i---~~~--~~~L~~~grll~~g~l~ 498 (732)
||+|||++|+|+|++ |+.+|+.|+++|+.++.++|+...... + .+. +......|++|++|.++
T Consensus 166 rY~LLL~~llk~t~~~~~d~~~l~~Al~~~~~v~~~iNe~~r~~e~~~~~~~~l~~~~~~~~~~~~~~~~g~ll~~~~~~ 245 (377)
T 1foe_A 166 KYPLLLRELFALTDAESEEHYHLDVAIKTMNKVASHINEMQKIHEEFGAVFDQLIAEQTGEKKEVADLSMGDLLLHTSVI 245 (377)
T ss_dssp THHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCSCSSCCCCGGGEEEEEEEE
T ss_pred cHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCccceeeeccee
Confidence 999999999999994 567799999999999999999754211 1 111 11234579999999988
Q ss_pred EEeC-----C-CCeeEEEEEccCCeEEEEEeeeCC--CC-C---------CCcceEEeeeeeecceEEEEecCCCC---C
Q psy9950 499 VSQG-----K-GKKCLRHVFLFEELILFSKARRFP--DR-K---------NLDLYIYKHSMKMSDIGITAQIGDSS---T 557 (732)
Q Consensus 499 v~~~-----~-~kk~~r~vFLF~D~LL~~K~kk~~--~~-~---------~~~~y~~K~~i~l~~i~v~e~~~~~~---~ 557 (732)
++.. + ++.+++++|||+|+||+|.+...+ .. . ....|.|+..|+|.++.|++..++++ .
T Consensus 246 ~~~~~~~~~~~~k~~~~~~fLF~d~lll~~k~~~~~k~~~~~~~~~s~~~~~~~y~~k~~i~l~~~~v~~~~~~~~~~~~ 325 (377)
T 1foe_A 246 WLNPPASLGKWKKEPELAAFVFKTAVVLVYKDGSKQKKKLVGSHRLSIYEEWDPFRFRHMIPTEALQVRALPSADAEANA 325 (377)
T ss_dssp ESSCCHHHHTTCSSCEEEEEEETTEEEEEECCCCCSCCSSCCCTTTTCSSCSCSCCCEEEEEGGGEEEECCCCTTTTSCC
T ss_pred eccCchhhccccccceEEEEEcCCeEEEEeccccccccccccccccccccCCCceeEeeeccccceEEEecCCCccchhh
Confidence 7642 2 355799999999998887542110 00 0 12479999999999999998765443 4
Q ss_pred cEEEEEee----cCCCeEEEEEcCCHHHHHHHHHHHHHHHHHHHH
Q psy9950 558 KFEIWFRK----RKPNETFTLQSMSEDIKQAWTDELSNLLWKQAL 598 (732)
Q Consensus 558 ~F~I~~~~----~~~~~~~~L~A~S~eeK~~Wi~~I~~~i~~q~~ 598 (732)
.|+||+.. +.+...|+|+|+|+++|+.|+++|+++|++.+.
T Consensus 326 ~f~i~~~~~~~~~~~~~~~~l~A~s~~eK~~W~~~i~~~i~~~~~ 370 (377)
T 1foe_A 326 VCEIVHVKSESEGRPERVFHLCCSSPESRKDFLKSVHSILRDKHR 370 (377)
T ss_dssp EEEEEECCBTGGGBCCEEEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccccccCCCcceEEEEeCCHHHHHHHHHHHHHHhhHHhh
Confidence 58898754 234689999999999999999999999987543
No 10
>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*
Probab=100.00 E-value=6e-45 Score=399.30 Aligned_cols=297 Identities=15% Similarity=0.267 Sum_probs=239.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhhhHHHHhCCHHHHHHHHHHHHHHHHHHHhcCC--
Q psy9950 294 LKTQKNLLFIMREMIQTERDYVKSLEYVILNYIPELTREDIPQALRGQRNVIFGNIEKIYEFHSQHFLGELEQCANLP-- 371 (732)
Q Consensus 294 ~k~~~kRq~iI~ELi~TE~~YV~~L~~l~~~y~~pL~~~~~p~~l~~~~~~IF~NIe~I~~~Hs~~fL~~Le~~~~~~-- 371 (732)
.+++.+|++||+||++||++||++|+.++++|+.||....+.. .+++..||+||++|+++| ..||.+|+.+...+
T Consensus 16 ~~~~~kR~~vi~ELi~TE~~Yv~~L~~l~~~f~~~l~~~~~l~--~~~~~~iF~ni~~i~~~h-~~fl~~L~~~~~~~~~ 92 (368)
T 1xcg_A 16 TQREIDRQEVINELFVTEASHLRTLRVLDLIFYQRMKKENLMP--REELARLFPNLPELIEIH-NSWCEAMKKLREEGPI 92 (368)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTSSC--HHHHHHHSSSHHHHHHHH-HHHHHHHHHHHHTCSS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC--HHHHHHHhCCHHHHHHHH-HHHHHHHHHHHhcCCC
Confidence 4678899999999999999999999999999999999765433 367899999999999999 69999999998654
Q ss_pred -CchHHHHhhhhh------hhhhHHHhhhchHHHHHHHHHHh------HHHHHHHHHh-hcCCCChhhhhhhhHhhHHhh
Q psy9950 372 -LSVGQCFLNHEN------KFYLYALYNKNKPKSDALMTEYG------SSFFKAKQLE-LADRMDLASYLLKPVQRMGKY 437 (732)
Q Consensus 372 -~~Ig~iFl~~~~------~f~~Y~~Y~~n~~~a~~~L~~~~------~~ffk~~~~~-l~~~l~L~slLikPVQRI~rY 437 (732)
..||++|++++. .|.+|..||.|++.|.+++.++. ..|++.++.. .+++++|.+||++|||||+||
T Consensus 93 ~~~ig~~f~~~~~~~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~~~~~~f~~fl~~~~~~~~~~~l~L~~~Li~PvQRi~rY 172 (368)
T 1xcg_A 93 IKEISDLMLARFDGPAREELQQVAAQFCSYQSIALELIKTKQRKESRFQLFMQEAESHPQCRRLQLRDLIISEMQRLTKY 172 (368)
T ss_dssp CCCCHHHHHHHHSHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHHHTSGGGTTCCHHHHTTHHHHHHHHH
T ss_pred cCcHHHHHHHHccchhHHHHHHHHHHHHhhHHHHHHHHHHHHhCCHHHHHHHHHHHhChhhccCChHHHhhhHhhhhhhH
Confidence 379999999863 47999999999999999998764 3455555543 478999999999999999999
Q ss_pred HHHHHHHHhcCcc---cHHHHHHHHHHHHHHhhhhhhHhhh-------hhhccc---------c-------ccc-ccccc
Q psy9950 438 ALLLQQLMKASRQ---DVKDIKEAESMVRFQLRHGNDLLAM-------DSLREC---------D-------VNL-KEQGR 490 (732)
Q Consensus 438 ~LLLkeLlK~T~~---d~~dL~~Al~~v~~~~~~iNd~~~~-------~~i~~~---------~-------~~L-~~~gr 490 (732)
+|||++|+|+|++ |+.+|++|++.|+.++.++|+.+.. ..+++. . .++ ...|+
T Consensus 173 ~LLL~~llk~t~~~~~d~~~l~~A~~~~~~v~~~vN~~~~~~e~~~~l~~i~~~l~~~~~~~~~~pl~~~~~~l~~~~R~ 252 (368)
T 1xcg_A 173 PLLLESIIKHTEGGTSEHEKLCRARDQCREILKYVNEAVKQTENRHRLEGYQKRLDATALERASNPLAAEFKSLDLTTRK 252 (368)
T ss_dssp HHHHHHHHHTSCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHSCSCTTTGGGGGCCGGGSC
T ss_pred HHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhhcccchhhhhhhcccccce
Confidence 9999999999994 5677999999999999999986542 112110 0 112 24588
Q ss_pred ccccccEEEEeCCCCeeEEEEEccCCeEEEEEeeeCC----------CCCCCcceEEeeeeeecceEEEEecCCCCCcEE
Q psy9950 491 LLRQNEFIVSQGKGKKCLRHVFLFEELILFSKARRFP----------DRKNLDLYIYKHSMKMSDIGITAQIGDSSTKFE 560 (732)
Q Consensus 491 ll~~g~l~v~~~~~kk~~r~vFLF~D~LL~~K~kk~~----------~~~~~~~y~~K~~i~l~~i~v~e~~~~~~~~F~ 560 (732)
+|++|.+.+...+++.++||+|||+|+||+||++..+ .+.....|.|+..|++.++.|.+. .++...|.
T Consensus 253 li~~G~l~~~~~~~~~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~v~~~-~~~~~~f~ 331 (368)
T 1xcg_A 253 MIHEGPLTWRISKDKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSV-ATDKRAFF 331 (368)
T ss_dssp EEEEEEEEECCSSSCCCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGGEEEEEC-SSCSSEEE
T ss_pred EEeecceEeeecCCCeeEEEEEcccccHHHhhcccccceeeeccccccCCCCcccCcCCceEccceeeecc-cCCCceEE
Confidence 9999999865555677899999999999999986311 011234688999999999999875 34567888
Q ss_pred EEEeec-CCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q psy9950 561 IWFRKR-KPNETFTLQSMSEDIKQAWTDELSNLLW 594 (732)
Q Consensus 561 I~~~~~-~~~~~~~L~A~S~eeK~~Wi~~I~~~i~ 594 (732)
++.... ++...|+|+|.|+++|+.|+++|+++|.
T Consensus 332 i~~~~~~g~~~~~~l~a~s~~ek~~W~~~i~~ai~ 366 (368)
T 1xcg_A 332 IICTSKLGPPQIYELVALTSSDKNTWMELLEEAVR 366 (368)
T ss_dssp EEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCceEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 876533 3358999999999999999999999984
No 11
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=100.00 E-value=1.7e-44 Score=408.05 Aligned_cols=304 Identities=25% Similarity=0.423 Sum_probs=246.8
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCCchhhhhhHHHHhCCHHHHHHHHHHHHHHHHHHHhcC
Q psy9950 292 QTLKTQKNLLFIMREMIQTERDYVKSLEYVILNYIPELTR-EDIPQALRGQRNVIFGNIEKIYEFHSQHFLGELEQCANL 370 (732)
Q Consensus 292 ~~~k~~~kRq~iI~ELi~TE~~YV~~L~~l~~~y~~pL~~-~~~p~~l~~~~~~IF~NIe~I~~~Hs~~fL~~Le~~~~~ 370 (732)
+..+++.+|++||+||++||++||++|+.++++|+.||.. ..+.. .+++..||+||++|+.+| ..||.+|+.+...
T Consensus 111 ~~~~~~~kR~~vi~ELl~TE~~Yv~~L~~l~~~y~~~l~~~~~~l~--~~~~~~iF~ni~~I~~~h-~~fL~~Le~~~~~ 187 (466)
T 2pz1_A 111 AQSSKDQMRTNVINEILSTERDYIKHLRDICEGYVRQCRKRADMFS--EEQLRTIFGNIEDIYRCQ-KAFVKALEQRFNR 187 (466)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHCTTTCC--HHHHHHHHTTHHHHHHHH-HHHHHHHHHHCCS
T ss_pred ccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcCCCC--HHHHHHHHcCHHHHHHHH-HHHHHHHHHHHcc
Confidence 3456788999999999999999999999999999999974 23332 478999999999999999 6899999999864
Q ss_pred C----CchHHHHhhhhhhhhhHHHhhhchHHHHHHHHHHh-----HHHHHHHHH-hhcCCCChhhhhhhhHhhHHhhHHH
Q psy9950 371 P----LSVGQCFLNHENKFYLYALYNKNKPKSDALMTEYG-----SSFFKAKQL-ELADRMDLASYLLKPVQRMGKYALL 440 (732)
Q Consensus 371 ~----~~Ig~iFl~~~~~f~~Y~~Y~~n~~~a~~~L~~~~-----~~ffk~~~~-~l~~~l~L~slLikPVQRI~rY~LL 440 (732)
+ ..||+||+++.+.|++|..||.||+.|...|.++. ..|++.++. ..+.+++|.+||++|||||+||+||
T Consensus 188 ~~~~~~~ig~~fl~~~~~f~~Y~~Y~~n~~~a~~~l~~~~~~~~f~~f~~~~~~~~~~~~l~L~~~Li~PvQRi~rY~LL 267 (466)
T 2pz1_A 188 ERPHLSELGACFLEHQADFQIYSEYCNNHPNACVELSRLTKLSKYVYFFEACRLLQKMIDISLDGFLLTPVQKICKYPLQ 267 (466)
T ss_dssp SCGGGCCCHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCccchHHHHHHHhhHHHHHHHHHHHhhHHHHHHHHHHHhccHHHHHHHHHHHhhhhccCCHHHHhhhHHHHhhhHHHH
Confidence 3 47999999999999999999999999999998875 466776653 3467899999999999999999999
Q ss_pred HHHHHhcCc---ccHHHHHHHHHHHHHHhhhhhhHhh----h-------hhhccccc-c-ccccccccccccEEEEeC-C
Q psy9950 441 LQQLMKASR---QDVKDIKEAESMVRFQLRHGNDLLA----M-------DSLRECDV-N-LKEQGRLLRQNEFIVSQG-K 503 (732)
Q Consensus 441 LkeLlK~T~---~d~~dL~~Al~~v~~~~~~iNd~~~----~-------~~i~~~~~-~-L~~~grll~~g~l~v~~~-~ 503 (732)
|++|+|+|+ +|+.+|++|+++|+.++.++|+.+. + ..|.++.. + +...|+||++|.+..... +
T Consensus 268 L~~llk~t~~~~~d~~~l~~Al~~i~~v~~~iNe~~r~~e~~~~l~~lq~~i~~~~~~~l~~~~r~li~~G~l~~~~~~~ 347 (466)
T 2pz1_A 268 LAELLKYTHPQHRDFKDVEAALHAMKNVAQLINERKRRLENIDKIAQWQSSIEDWEGEDLLVRSSELIYSGELTRVTQPQ 347 (466)
T ss_dssp HHHHHHTSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSBTCCSSCHHHHCSCEEEEEEEEEECTTT
T ss_pred HHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccceeEEeeeEEEEecCC
Confidence 999999999 5678899999999999999998543 1 22333322 2 345789999999988765 3
Q ss_pred CCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecCCCC--------CcEEEEEeecCCCeEEEEE
Q psy9950 504 GKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGDSS--------TKFEIWFRKRKPNETFTLQ 575 (732)
Q Consensus 504 ~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~~~--------~~F~I~~~~~~~~~~~~L~ 575 (732)
++.++||+|||+|+|||||++.. ....|.||..|+|.++.|++..+++. +.|.|+. ..+.+.|+|+
T Consensus 348 ~~~~~r~~fLF~d~Ll~~k~~~~----~~~~~~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~--~~~~~~~~l~ 421 (466)
T 2pz1_A 348 AKSQQRMFFLFDHQLIYCKKDLL----RRDVLYYKGRLDMDGLEVVDLEDGKDRDLHVSIKNAFRLHR--GATGDSHLLC 421 (466)
T ss_dssp CCEEEEEEEEETTEEEEEEECSS----CTTCEEEEEEEETTTCEEEECCSBSCCSSCCCBCEEEEEEC--SSSCCEEEEE
T ss_pred CCeeEEEEEEECCEEEEEEeccc----cCCceEEeeeeeccceEEEeCCCCcccccccccceeEEEEe--CCCCeEEEEE
Confidence 67889999999999999998632 34579999999999999998765432 3466553 3346799999
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCC
Q psy9950 576 SMSEDIKQAWTDELSNLLWKQALRNRAMRLQEMSSMGI 613 (732)
Q Consensus 576 A~S~eeK~~Wi~~I~~~i~~q~~~~r~~rl~e~~~~gi 613 (732)
|+|+++|+.|+++|++++. +++++..||+
T Consensus 422 a~s~~eK~~W~~~i~~a~~---------~~~~~~~~~~ 450 (466)
T 2pz1_A 422 TRKPEQKQRWLKAFARERE---------QVQLDQETGF 450 (466)
T ss_dssp ESSHHHHHHHHHHHHHHHH---------HHHTC-----
T ss_pred eCCHHHHHHHHHHHHHHHH---------HHHhhhhcCc
Confidence 9999999999999999863 3566666654
No 12
>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A
Probab=100.00 E-value=2.1e-44 Score=396.12 Aligned_cols=290 Identities=16% Similarity=0.246 Sum_probs=239.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhhhHHHHhCCHHHHHHHHHHHHHHHHHHHhcCC--
Q psy9950 294 LKTQKNLLFIMREMIQTERDYVKSLEYVILNYIPELTREDIPQALRGQRNVIFGNIEKIYEFHSQHFLGELEQCANLP-- 371 (732)
Q Consensus 294 ~k~~~kRq~iI~ELi~TE~~YV~~L~~l~~~y~~pL~~~~~p~~l~~~~~~IF~NIe~I~~~Hs~~fL~~Le~~~~~~-- 371 (732)
.+++.+|++||+||++||+.||++|+.++++|+.||....+.. .+++..||+||++|+++| +.||.+|+.+...+
T Consensus 22 ~~~~~kR~~vi~ELi~TE~~Yv~~L~~l~~~y~~~l~~~~~l~--~~~~~~iF~ni~~I~~~h-~~fl~~L~~~~~~~~~ 98 (377)
T 3p6a_A 22 PKSQVKRQEVISELLVTEAAHVRMLRVLHDLFFQPMAECLFFP--LEELQNIFPSLDELIEVH-SLFLDRLMKRRQESGY 98 (377)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTSSC--HHHHHHHSTTHHHHHHHH-HHHHHHHHHHHHHC--
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCC--HHHHHHHHccHHHHHHHH-HHHHHHHHHHHhccCC
Confidence 4677899999999999999999999999999999998755443 367899999999999999 69999999876532
Q ss_pred --CchHHHHhhhhhh-----h-hhHHHhhhchHHHHHHHHHHh------HHHHHHHHH-hhcCCCChhhhhhhhHhhHHh
Q psy9950 372 --LSVGQCFLNHENK-----F-YLYALYNKNKPKSDALMTEYG------SSFFKAKQL-ELADRMDLASYLLKPVQRMGK 436 (732)
Q Consensus 372 --~~Ig~iFl~~~~~-----f-~~Y~~Y~~n~~~a~~~L~~~~------~~ffk~~~~-~l~~~l~L~slLikPVQRI~r 436 (732)
..||++|+++++. | ++|..||.||+.|..++.++. ..|++.++. ..+++++|.+||++|||||+|
T Consensus 99 ~~~~ig~~fl~~~~~~~~~~~~~~Y~~Y~~n~~~a~~~l~~~~~~~~~f~~~l~~~~~~~~~~~l~L~~~Li~PvQRi~r 178 (377)
T 3p6a_A 99 LIEEIGDVLLARFDGAEGSWFQKISSRFCSRQSFALEQLKAKQRKDPRFCAFVQEAESRPRCRRLQLKDMIPTEMQRLTK 178 (377)
T ss_dssp CCCCCHHHHHHHHSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHHHTSGGGTTCCHHHHTTHHHHHHHH
T ss_pred CCCcHHHHHHHHhcchhhHHHHHHHHHHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHhCcccCCCCHHHHHHHHHHHhhh
Confidence 4899999999874 4 899999999999999998764 345555543 467899999999999999999
Q ss_pred hHHHHHHHHhcCc--ccHHHHHHHHHHHHHHhhhhhhHhhh-------hhhc-----------------ccccccccccc
Q psy9950 437 YALLLQQLMKASR--QDVKDIKEAESMVRFQLRHGNDLLAM-------DSLR-----------------ECDVNLKEQGR 490 (732)
Q Consensus 437 Y~LLLkeLlK~T~--~d~~dL~~Al~~v~~~~~~iNd~~~~-------~~i~-----------------~~~~~L~~~gr 490 (732)
|+|||++|+|+|+ +|+.+|++|++.|+.++.++|+.+.. ..|+ ++.......|+
T Consensus 179 Y~LLL~~llk~t~~~~d~~~l~~A~~~i~~v~~~in~~~~~~e~~~~l~~iq~~l~~~~~~~~~~~~~~~~~~l~~~~r~ 258 (377)
T 3p6a_A 179 YPLLLQSIGQNTEEPTEREKVELAAECCREILHHVNQAVRDMEDLLRLKDYQRRLDLSHLRQSSDPMLSEFKNLDITKKK 258 (377)
T ss_dssp HHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHCCCGGGSSSTTCCCTTSC
T ss_pred HHHHHHHHHhhCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccchhhhhcccccccce
Confidence 9999999999998 67888999999999999999986531 1111 11111114588
Q ss_pred ccccccEEEEeCCCCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEee-----------------eeeecceEEEEecC
Q psy9950 491 LLRQNEFIVSQGKGKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKH-----------------SMKMSDIGITAQIG 553 (732)
Q Consensus 491 ll~~g~l~v~~~~~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~-----------------~i~l~~i~v~e~~~ 553 (732)
+|++|.+.+...+++.++||+|||+|+|||||++. ..|.|+. .|++..+.+.+ +.
T Consensus 259 li~eG~l~~~~~~~~~~~~~~fLF~d~Ll~~k~k~-------~k~~~k~~~~~~~~~~~~k~~~~~~i~l~~~~v~e-~~ 330 (377)
T 3p6a_A 259 LVHEGPLTWRVTKDKAVEVHVLLLDDLLLLLQRQD-------ERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTRE-VA 330 (377)
T ss_dssp EEEEEEEEEESSSSCEEEEEEEEESSEEEEEEEET-------TEEECCCCCCC---------CSCSEEEGGGEEEEE-CT
T ss_pred EEEECCcEEEecCCCeEEEEEEeeCCEEEEEEEcC-------ceeEEeecccccccCccccCCCCCeEechhhhccc-cc
Confidence 99999998877777888999999999999999762 2355553 59999999888 45
Q ss_pred CCCCcEEEEEeecCCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q psy9950 554 DSSTKFEIWFRKRKPNETFTLQSMSEDIKQAWTDELSNLLW 594 (732)
Q Consensus 554 ~~~~~F~I~~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i~ 594 (732)
++...|.+++....+...|+|+|+|.++|+.|+++|+++|.
T Consensus 331 ~~~~~~~~i~~~~~~~~~~~l~A~s~~ek~~W~~~I~~ai~ 371 (377)
T 3p6a_A 331 TDHKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAG 371 (377)
T ss_dssp TCTTEEEEEETTCTTCCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred cccceeEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHH
Confidence 55667777766556778999999999999999999999974
No 13
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Probab=100.00 E-value=7.6e-44 Score=393.04 Aligned_cols=300 Identities=18% Similarity=0.263 Sum_probs=236.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhhhHHHHhCCHHHHHHHHHHHHHHHHHHHhcC--
Q psy9950 293 TLKTQKNLLFIMREMIQTERDYVKSLEYVILNYIPELTREDIPQALRGQRNVIFGNIEKIYEFHSQHFLGELEQCANL-- 370 (732)
Q Consensus 293 ~~k~~~kRq~iI~ELi~TE~~YV~~L~~l~~~y~~pL~~~~~p~~l~~~~~~IF~NIe~I~~~Hs~~fL~~Le~~~~~-- 370 (732)
-.+.+.+|++||+||++||++||++|+.++++|+.||....+.. ..++..||+||++|+++| .||.+|+.+...
T Consensus 18 l~~~~~kR~~vi~ELi~TE~~Yv~~L~~l~~~f~~~l~~~~~l~--~~~~~~iF~ni~~I~~~h--~fL~~l~~~~~~~~ 93 (385)
T 1txd_A 18 LKPCEIKRQEVINELFYTERAHVRTLKVLDQVFYQRVSREGILS--PSELRKIFSNLEDILQLH--IGLNEQMKAVRKRN 93 (385)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTCSC--HHHHHHHHTTHHHHHHHH--HHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC--HHHHHHHhcCHHHHHHHH--HHHHHHHHHHHHhh
Confidence 34677899999999999999999999999999999998654433 367899999999999999 699999987521
Q ss_pred ----CCchHHHHhhhhh-----hh-hhHHHhhhchHHHHHHHHHHh------HHHHHHHHH-hhcCCCChhhhhhhhHhh
Q psy9950 371 ----PLSVGQCFLNHEN-----KF-YLYALYNKNKPKSDALMTEYG------SSFFKAKQL-ELADRMDLASYLLKPVQR 433 (732)
Q Consensus 371 ----~~~Ig~iFl~~~~-----~f-~~Y~~Y~~n~~~a~~~L~~~~------~~ffk~~~~-~l~~~l~L~slLikPVQR 433 (732)
...||++|+++++ .| ++|..||.||+.|.+.+.++. ..|++.++. ..+++++|.+||++||||
T Consensus 94 ~~~~~~~ig~~fl~~~~~~~~~~f~~~Y~~Y~~n~~~a~~~l~~~~~~~~~f~~fl~~~~~~~~~~~l~L~~~Li~PvQR 173 (385)
T 1txd_A 94 ETSVIDQIGEDLLTWFSGPGEEKLKHAAATFCSNQPFALEMIKSRQKKDSRFQTFVQDAESNPLCRRLQLKDIIPTQMQR 173 (385)
T ss_dssp TTCCCCCCHHHHHHHHSTHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHHHHSGGGTTCCHHHHTTHHHHH
T ss_pred cCCCcccHHHHHHHHccchhHHHHHHHHHHHHHchHHHHHHHHHHHhcCHHHHHHHHHHHhCccccCCChHHHhhhHHhH
Confidence 3489999999964 45 999999999999999998764 355666553 467899999999999999
Q ss_pred HHhhHHHHHHHHhcCc--ccHHHHHHHHHHHHHHhhhhhhHhhh-------hhhccc-c---------------ccc-cc
Q psy9950 434 MGKYALLLQQLMKASR--QDVKDIKEAESMVRFQLRHGNDLLAM-------DSLREC-D---------------VNL-KE 487 (732)
Q Consensus 434 I~rY~LLLkeLlK~T~--~d~~dL~~Al~~v~~~~~~iNd~~~~-------~~i~~~-~---------------~~L-~~ 487 (732)
|+||+|||++|+|+|+ +|+.+|++|++.|+.++.++|+.+.. ..|++. . .++ ..
T Consensus 174 i~rY~LLL~~llk~t~~~~d~~~l~~Al~~i~~v~~~iN~~~~~~e~~~~l~~i~~~l~~~~~~~~~~p~~~~~~~l~~~ 253 (385)
T 1txd_A 174 LTKYPLLLDNIAKYTEWPTEREKVKKAADHCRQILNFVNQAVKEAENKQRLEDYQRRLDTSSLKLSEYPNVEELRNLDLT 253 (385)
T ss_dssp HHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC-------CHHHHTCCGG
T ss_pred hhhHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccccchhhhhhcccc
Confidence 9999999999999999 56888999999999999999986532 122211 0 011 23
Q ss_pred cccccccccEEEEeCCCCeeEEEEEccCCeEEEEEeeeCCC----------CCCCcceEEeeeeeecceEEEEecCCCCC
Q psy9950 488 QGRLLRQNEFIVSQGKGKKCLRHVFLFEELILFSKARRFPD----------RKNLDLYIYKHSMKMSDIGITAQIGDSST 557 (732)
Q Consensus 488 ~grll~~g~l~v~~~~~kk~~r~vFLF~D~LL~~K~kk~~~----------~~~~~~y~~K~~i~l~~i~v~e~~~~~~~ 557 (732)
.|++|++|.+.+...+++.++||+|||+|+|||||++...- ......|.|+..|++.++.|.+..++...
T Consensus 254 ~R~li~eG~l~~~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~d~~~ 333 (385)
T 1txd_A 254 KRKMIHEGPLVWKVNRDKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVIKLSTVLVRQVATDNKA 333 (385)
T ss_dssp GSCEEEEEEEEEESSSSCBCCEEEEEESSEEEEEEEETTEEECCC-------------CCCSEEEGGGEEEEECCC-CCE
T ss_pred cceEEEECcEEEEcCCCCeEEEEEEecCCeeEEEEecCCeeEEeeccccccccCCCCcCCCCceecccccccccccCCce
Confidence 58899999998765556778999999999999999863100 01123577899999999999886555444
Q ss_pred cEEEEEeecCCCeEEEEEcCCHHHHHHHHHHHHHHHHHHH
Q psy9950 558 KFEIWFRKRKPNETFTLQSMSEDIKQAWTDELSNLLWKQA 597 (732)
Q Consensus 558 ~F~I~~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i~~q~ 597 (732)
.|.|++. ..+...|+|+|+|+++|+.|+++|++++.+..
T Consensus 334 ~f~i~~~-~~~~~~~~l~a~s~~ek~~W~~~i~~~i~~~~ 372 (385)
T 1txd_A 334 LFVISMS-DNGAQIYELVAQTVSEKTVWQDLICRMAASVK 372 (385)
T ss_dssp EEEEEEC-SSCEEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEc-CCCceEEEEEcCCHHHHHHHHHHHHHHHHhcc
Confidence 4555543 34568999999999999999999999986543
No 14
>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A
Probab=100.00 E-value=1e-43 Score=407.53 Aligned_cols=298 Identities=15% Similarity=0.212 Sum_probs=236.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhhhHHHHhCCHHHHHHHHHHHHHHHHHHHhcCC--
Q psy9950 294 LKTQKNLLFIMREMIQTERDYVKSLEYVILNYIPELTREDIPQALRGQRNVIFGNIEKIYEFHSQHFLGELEQCANLP-- 371 (732)
Q Consensus 294 ~k~~~kRq~iI~ELi~TE~~YV~~L~~l~~~y~~pL~~~~~p~~l~~~~~~IF~NIe~I~~~Hs~~fL~~Le~~~~~~-- 371 (732)
.+++.||++||+|||+||+.||++|+.|+++|+.||....+.. ..++..||+||++|+++| +.||.+|+.+...+
T Consensus 175 ~~~e~kRq~vi~ELi~TE~~YV~~L~~l~~~y~~pl~~~~~l~--~~~~~~IF~nie~I~~~h-~~fL~~L~~~~~~~~~ 251 (536)
T 3odw_A 175 PKSQVKRQEVISELLVTEAAHVRMLRVLHDLFFQPMAECLFFP--LEELQNIFPSLDELIEVH-SLFLDRLMKRRQESGY 251 (536)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTSSC--HHHHHHHSTTHHHHHHHH-HHHHHHHHHHHHTC--
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC--HHHHHHHHhhHHHHHHHH-HHHHHHHHHHHHhcCc
Confidence 4678899999999999999999999999999999998765443 467899999999999999 69999999987543
Q ss_pred --CchHHHHhhhhhh-----h-hhHHHhhhchHHHHHHHHHHh------HHHHHHHHH-hhcCCCChhhhhhhhHhhHHh
Q psy9950 372 --LSVGQCFLNHENK-----F-YLYALYNKNKPKSDALMTEYG------SSFFKAKQL-ELADRMDLASYLLKPVQRMGK 436 (732)
Q Consensus 372 --~~Ig~iFl~~~~~-----f-~~Y~~Y~~n~~~a~~~L~~~~------~~ffk~~~~-~l~~~l~L~slLikPVQRI~r 436 (732)
..||+||+++++. | ++|..||.||+.|..+|.++. ..|++.++. ..+++++|.+||++|||||+|
T Consensus 252 ~~~~Igdifl~~~~~~~~~~f~~~Y~~Y~~n~~~a~~~l~~~~~~~~~f~~fl~~~~~~~~~~~l~L~s~Li~PvQRi~r 331 (536)
T 3odw_A 252 LIEEIGDVLLARFDGAEGSWFQKISSRFCSRQSFALEQLKAKQRKDPRFCAFVQEAESRPRCRRLQLKDMIPTEMQRLTK 331 (536)
T ss_dssp -CCCCHHHHHHHHSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHHTTSGGGTTCCHHHHTTHHHHHHHH
T ss_pred ccccHHHHHHHHcchhhhHHHHHHHHHHHhhHHHHHHHHHHHHhhCHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHHH
Confidence 5899999999863 4 899999999999999998864 345555543 357899999999999999999
Q ss_pred hHHHHHHHHhcCc--ccHHHHHHHHHHHHHHhhhhhhHhhh-------hhhcc-----------------cccccccccc
Q psy9950 437 YALLLQQLMKASR--QDVKDIKEAESMVRFQLRHGNDLLAM-------DSLRE-----------------CDVNLKEQGR 490 (732)
Q Consensus 437 Y~LLLkeLlK~T~--~d~~dL~~Al~~v~~~~~~iNd~~~~-------~~i~~-----------------~~~~L~~~gr 490 (732)
|+|||++|+|+|+ +|+.+|++|++.|+.++.++|+.+.. ..|+. +.......|+
T Consensus 332 Y~LLL~~LlK~T~~~~d~~~L~~Al~~i~~v~~~iNe~~r~~e~~~kL~~iq~~L~~~~~~~~~~~~i~~~~~ldl~~R~ 411 (536)
T 3odw_A 332 YPLLLQSIGQNTEEPTEREKVELAAECCREILHHVNQAVRDMEDLLRLKDYQRRLDLSHLRQSSDPMLSEFKNLDITKKK 411 (536)
T ss_dssp HHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECTTTTTC---CCTTSSSCCCTTSC
T ss_pred HHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchhhhcccccccce
Confidence 9999999999998 67888999999999999999986541 11111 1111113588
Q ss_pred ccccccEEEEeCCCCeeEEEEEccCCeEEEEEeeeCCCC----------CCCcceEEeeeeeecceEEEEecCCCCCcEE
Q psy9950 491 LLRQNEFIVSQGKGKKCLRHVFLFEELILFSKARRFPDR----------KNLDLYIYKHSMKMSDIGITAQIGDSSTKFE 560 (732)
Q Consensus 491 ll~~g~l~v~~~~~kk~~r~vFLF~D~LL~~K~kk~~~~----------~~~~~y~~K~~i~l~~i~v~e~~~~~~~~F~ 560 (732)
||++|.+.+...+++.++||+|||+|+|||||++...-. .....+.|+..|++.++.+.+ +.++...|.
T Consensus 412 LI~eG~l~~~~~~~k~~~r~~fLF~D~LL~~k~k~~ky~~k~~~~~~~~~~d~k~~~~~~i~L~~l~v~e-~~~d~~~ff 490 (536)
T 3odw_A 412 LVHEGPLTWRVTKDKAVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTRE-VATDHKAFY 490 (536)
T ss_dssp EEEEEEEEEESCC---CEEEEEEESSEEEEEEEETTEEECCCC------------CCCSEEEGGGEEEEE-CTTCTTEEE
T ss_pred eeeecceEEEecCCCeeEEEEEEcCCEEEEEEEcCCeEEEeecccccccccccccccCceeecccceeec-ccccCCceE
Confidence 999999988777777889999999999999998731000 000112334469999998887 455667788
Q ss_pred EEEeecCCCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q psy9950 561 IWFRKRKPNETFTLQSMSEDIKQAWTDELSNLLWK 595 (732)
Q Consensus 561 I~~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i~~ 595 (732)
+++....+.+.|+|+|.|.++|+.|+++|+++|.+
T Consensus 491 li~~~~~~~~~~~L~A~S~eEK~~W~~~I~~aI~~ 525 (536)
T 3odw_A 491 VLFTWDQEAQIYELVAQTVSERKNWCALITETAGS 525 (536)
T ss_dssp EEEC---CCCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred EEecCCCCceEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 88765567789999999999999999999999843
No 15
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.2e-43 Score=395.19 Aligned_cols=293 Identities=19% Similarity=0.282 Sum_probs=224.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-------CCchhhhhhHHHHhCCHHHHHHHHHHHHHHHHHH
Q psy9950 294 LKTQKNLLFIMREMIQTERDYVKSLEYVILNYIPELTRE-------DIPQALRGQRNVIFGNIEKIYEFHSQHFLGELEQ 366 (732)
Q Consensus 294 ~k~~~kRq~iI~ELi~TE~~YV~~L~~l~~~y~~pL~~~-------~~p~~l~~~~~~IF~NIe~I~~~Hs~~fL~~Le~ 366 (732)
...++||+.||+|||+||+.||++|+.++++|+.||.+. ..+....+++..||+||++|+++| +.||.+|+.
T Consensus 17 ~e~~~kr~~ii~ELl~TE~~Yv~~L~~l~~~f~~pl~~~l~~~~~~~~~~l~~~~~~~iF~ni~~I~~~h-~~fL~~L~~ 95 (434)
T 3mpx_A 17 QGGQSRALVIAQELLSSEKAYVEMLQHLNLDFHGAVMRALDDMDHEGRDTLAREELRQGLSELPAIHDLH-QGILEELEE 95 (434)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTC--CHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCHHHHHHHhcCHHHHHHHH-HHHHHHHHH
Confidence 344578999999999999999999999999999999642 223333578999999999999999 689999999
Q ss_pred HhcC---CCchHHHHhhhhhhhhhHHHhhhchHHHHHHHHHHh------HHHHHHHHH-hhcCCCChhhhhhhhHhhHHh
Q psy9950 367 CANL---PLSVGQCFLNHENKFYLYALYNKNKPKSDALMTEYG------SSFFKAKQL-ELADRMDLASYLLKPVQRMGK 436 (732)
Q Consensus 367 ~~~~---~~~Ig~iFl~~~~~f~~Y~~Y~~n~~~a~~~L~~~~------~~ffk~~~~-~l~~~l~L~slLikPVQRI~r 436 (732)
+... ...||++|+++.+.|++|..||.||+.|..++.++. ..|++.++. ..+++++|.+||++|||||+|
T Consensus 96 ~~~~~~~~~~ig~ifl~~~~~~~~Y~~Y~~n~~~a~~~l~~~~~~~~~f~~~l~~~~~~~~~~~l~L~s~Li~PvQRi~r 175 (434)
T 3mpx_A 96 RLSNWESQQKVADVFLAREQGFDHHATHILQFDRYLGLLSENCLHSPRLAAAVREFEQSVQGGSQTAKHRLLRVVQRLFQ 175 (434)
T ss_dssp HHHTTTTCCCCTHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTC------CHHHHHHHHHHHHHH
T ss_pred HHHhccCcccHHHHHHHhhHHHHHHHHHHHhHHHHHHHHHHHHHhChHHHHHHHHHHcCcccCCCCHHHHHhhhHHhhhH
Confidence 9865 458999999999999999999999999999999864 355666543 346889999999999999999
Q ss_pred hHHHHHHHHhcCc---ccHHHHHHHHHHHHHHhhhhhhHhhh-----------hhhccccccccccccccccccEEEEeC
Q psy9950 437 YALLLQQLMKASR---QDVKDIKEAESMVRFQLRHGNDLLAM-----------DSLRECDVNLKEQGRLLRQNEFIVSQG 502 (732)
Q Consensus 437 Y~LLLkeLlK~T~---~d~~dL~~Al~~v~~~~~~iNd~~~~-----------~~i~~~~~~L~~~grll~~g~l~v~~~ 502 (732)
|+|||++|+|+|+ +|+.+|++|++.|+.++.++|+.+.. ..|.+....+...+++|++|.+....+
T Consensus 176 Y~LLL~~llk~t~~~~~d~~~l~~Al~~i~~v~~~iN~~~~~~e~~~~l~~l~~~i~~~~~l~~~~r~li~~g~l~~~~~ 255 (434)
T 3mpx_A 176 YQVLLTDYLNNLCPDSAEYDNTQGALSLISKVTDRANDSMEQGENLQKLVHIEHSVRGQGDLLQPGREFLKEGTLMKVTG 255 (434)
T ss_dssp HHHHHHHHHTTSCTTSHHHHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHEETCCCCCCTTCCEEECCEEEEEET
T ss_pred HHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCcceEecceEEEEeC
Confidence 9999999999998 45667899999999999999986641 123333222333455678888876665
Q ss_pred CCCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecCCCCCcEEEEEeecCCCeEEEEEcCCHHHH
Q psy9950 503 KGKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGDSSTKFEIWFRKRKPNETFTLQSMSEDIK 582 (732)
Q Consensus 503 ~~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~~~~~F~I~~~~~~~~~~~~L~A~S~eeK 582 (732)
+ +.++||+|||+|+|||||+++ ...|.++..|+|.++.|.+..++ ...|.+++ ..+..+|+|+|.|+++|
T Consensus 256 ~-~~~~r~~fLF~d~Ll~~k~~~------~~~y~~k~~i~L~~l~v~~~~~~-~~~~~f~i--~~~~~~~~l~a~s~~ek 325 (434)
T 3mpx_A 256 K-NRRPRHLFLMNDVLLYTYPQK------DGKYRLKNTLAVANMKVSRPVME-KVPYALKI--ETSESCLMLSASSCAER 325 (434)
T ss_dssp T-EEEEEEEEEESSEEEEEEECT------TSCEEEEEEEEC-----CCCCCT-TSCSEEEE--ECSSCEEEEECSSHHHH
T ss_pred C-CceEEEEEEECCEEEEEEecC------CCeEEEEEEEEcCCcEEEecCCC-CCCeeEEE--ecCCeEEEEecCCHHHH
Confidence 5 678999999999999999863 23699999999999999864433 33344333 34567899999999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy9950 583 QAWTDELSNLLWKQA 597 (732)
Q Consensus 583 ~~Wi~~I~~~i~~q~ 597 (732)
+.|+++|+++|.+..
T Consensus 326 ~~W~~~i~~ai~e~~ 340 (434)
T 3mpx_A 326 DEWYGCLSRALPEDY 340 (434)
T ss_dssp HHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999997643
No 16
>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A
Probab=100.00 E-value=5.6e-43 Score=381.82 Aligned_cols=287 Identities=20% Similarity=0.307 Sum_probs=230.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhhhHHHHhCCHHHHHHHHHHHHHHHHHHHhcCC------Cc
Q psy9950 300 LLFIMREMIQTERDYVKSLEYVILNYIPELTREDIPQALRGQRNVIFGNIEKIYEFHSQHFLGELEQCANLP------LS 373 (732)
Q Consensus 300 Rq~iI~ELi~TE~~YV~~L~~l~~~y~~pL~~~~~p~~l~~~~~~IF~NIe~I~~~Hs~~fL~~Le~~~~~~------~~ 373 (732)
+++||+||++||++||++|+.++++|+.||..... ....+++..||+||++|+++| ..||.+|+.+...+ ..
T Consensus 4 y~~vi~Eli~TE~~Yv~~L~~l~~~y~~~l~~~~~-~l~~~~~~~iF~ni~~I~~~h-~~fl~~L~~~~~~~~~~~~~~~ 81 (354)
T 1dbh_A 4 YYDLVKAFMAEIRQYIRELNLIIKVFREPFVSNSK-LFSANDVENIFSRIVDIHELS-VKLLGHIEDTVEMTDEGSPHPL 81 (354)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHCTT-TCCHHHHHHHHTTHHHHHHHH-HHHHHHHHHHHHTCCTTSSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC-CCCHHHHHHHHcCHHHHHHHH-HHHHHHHHHHHhccccCCccch
Confidence 55899999999999999999999999999985431 112478999999999999999 68999999887532 57
Q ss_pred hHHHHhhhhh--hhhhHHHhhhch--HHHHHHHHHHh-----HHHHHHHH--HhhcCCCChhhhhhhhHhhHHhhHHHHH
Q psy9950 374 VGQCFLNHEN--KFYLYALYNKNK--PKSDALMTEYG-----SSFFKAKQ--LELADRMDLASYLLKPVQRMGKYALLLQ 442 (732)
Q Consensus 374 Ig~iFl~~~~--~f~~Y~~Y~~n~--~~a~~~L~~~~-----~~ffk~~~--~~l~~~l~L~slLikPVQRI~rY~LLLk 442 (732)
||++|+++.+ .|++|..||.|| +.|.+.+.++. ..|++... ...+.+++|.+||++|||||+||+|||+
T Consensus 82 ig~~f~~~~~~~~f~~Y~~Y~~n~~~~~a~~~l~~~~~~~~f~~~l~~~~~~~~~~~~~~L~~~Li~PvQRi~rY~LLL~ 161 (354)
T 1dbh_A 82 VGSCFEDLAEELAFDPYESYARDILRPGFHDRFLSQLSKPGAALYLQSIGEGFKEAVQYVLPRLLLAPVYHCLHYFELLK 161 (354)
T ss_dssp CHHHHHHHHHTTTTHHHHHHHHHHTSTTHHHHHHHHHHSTTHHHHHHHHCTTHHHHHHHTHHHHTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHhhhhHHHHHHHhccchHHHHHHHHHhcChHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhchHHHHHH
Confidence 9999999998 799999999999 55668888764 35555432 2346789999999999999999999999
Q ss_pred HHHhcCc--ccHHHHHHHHHHHHHHhhhhhhH----------------------h-------hh----hhhccccc-ccc
Q psy9950 443 QLMKASR--QDVKDIKEAESMVRFQLRHGNDL----------------------L-------AM----DSLRECDV-NLK 486 (732)
Q Consensus 443 eLlK~T~--~d~~dL~~Al~~v~~~~~~iNd~----------------------~-------~~----~~i~~~~~-~L~ 486 (732)
+|+|+|| +|+.+|++|+++|+.++..+|+. . .+ ..|.+++. ++.
T Consensus 162 ~llk~t~~~~d~~~L~~Al~~~~~v~~~in~~~~~~~~~r~~~e~~~~~~~ne~~r~~e~~~~l~~lq~~i~~~~~~~l~ 241 (354)
T 1dbh_A 162 QLEEKSEDQEDKECLKQAITALLNVQSGMEKICSKSLAKRRLSESACRFYSQQMKGKQLAIKKMNEIQKNIDGWEGKDIG 241 (354)
T ss_dssp HHHHHCSCHHHHHHHHHHHHHTHHHHHHHHHHHHSHHHHHHHHHTC-------------CTHHHHHHHTTEESCCSSCGG
T ss_pred HHHhcCCCCccHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhhhhhhhhhhhhHHHHHHHHHHHHHhcCCCCcccc
Confidence 9999998 56777899999999998888761 1 01 12444443 444
Q ss_pred -ccccccccccEEEEeCCCCeeEEEEEccCCeEEEEEeeeCCC---CCCCcceEEeeeeeecceEEEEecCCC--CCcEE
Q psy9950 487 -EQGRLLRQNEFIVSQGKGKKCLRHVFLFEELILFSKARRFPD---RKNLDLYIYKHSMKMSDIGITAQIGDS--STKFE 560 (732)
Q Consensus 487 -~~grll~~g~l~v~~~~~kk~~r~vFLF~D~LL~~K~kk~~~---~~~~~~y~~K~~i~l~~i~v~e~~~~~--~~~F~ 560 (732)
..|++|++|.+.++ |++++||+|||+|+||+||+++... +.....|.||..|++.++.|.+..+.+ .+.|.
T Consensus 242 ~~~r~li~eG~l~~~---g~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~y~~k~~i~l~~~~v~~~~d~~~~~~~F~ 318 (354)
T 1dbh_A 242 QCCNEFIMEGTLTRV---GAKHERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDTNEYKHAFE 318 (354)
T ss_dssp GTCCCEEEEEEEEET---TCSSCEEEEEESSEEEEEEECTTCCCCTTSCCCSEEEEEEEESCSCEEEECCCSSSCCSEEE
T ss_pred cccceEEEEeeEEEE---ecCceEEEEEeCCEEEEEecCCCCCCCCCCCCcceeEEEEEeccceEEEeCCcccccCccEE
Confidence 36789999999887 3678999999999999999874211 113468999999999999999865543 46788
Q ss_pred EEEeecCCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q psy9950 561 IWFRKRKPNETFTLQSMSEDIKQAWTDELSNLLW 594 (732)
Q Consensus 561 I~~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i~ 594 (732)
|+.. ....|+|+|+|+++|+.|+++|+++.+
T Consensus 319 i~~~---~~~~~~l~a~s~~ek~~W~~~i~~~~~ 349 (354)
T 1dbh_A 319 IILK---DENSVIFSAKSAEEKNNWMAALISLQY 349 (354)
T ss_dssp ECCT---TSCCEEEECSSHHHHHHHHHHHHHHHT
T ss_pred EecC---CCCEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 7632 257999999999999999999999853
No 17
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=100.00 E-value=1.6e-42 Score=395.27 Aligned_cols=295 Identities=18% Similarity=0.266 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhhhHHHHhCCHHHHHHHHHHHHHHHHHHHhcCC--
Q psy9950 294 LKTQKNLLFIMREMIQTERDYVKSLEYVILNYIPELTREDIPQALRGQRNVIFGNIEKIYEFHSQHFLGELEQCANLP-- 371 (732)
Q Consensus 294 ~k~~~kRq~iI~ELi~TE~~YV~~L~~l~~~y~~pL~~~~~p~~l~~~~~~IF~NIe~I~~~Hs~~fL~~Le~~~~~~-- 371 (732)
.+.++||++||+||++||+.||++|+.++++|+.||....+.. ..++..||+||++|+.+| +.||.+|+.+...+
T Consensus 22 ~~~e~kR~~vi~ELi~TE~~Yv~~L~~l~~~y~~~l~~~~~l~--~~~~~~iF~ni~~i~~~h-~~fl~~L~~~~~~~~~ 98 (510)
T 3jzy_A 22 QPIERKRQGYIHELIQTEERYMADLQLVVEVFQKRMAESGFLT--EGEMALIFVNWKELIMSN-TKLLKALRVRKKTGGE 98 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC--HHHHHHHccCHHHHHHHH-HHHHHHHHHHHhccCC
Confidence 4667899999999999999999999999999999998755443 367899999999999999 79999999887532
Q ss_pred ----CchHHHHhhhhhhhhhHHHhhhchHHHHHHHHHHh------HHHHHHHHH-hhcCCCChhhhhhhhHhhHHhhHHH
Q psy9950 372 ----LSVGQCFLNHENKFYLYALYNKNKPKSDALMTEYG------SSFFKAKQL-ELADRMDLASYLLKPVQRMGKYALL 440 (732)
Q Consensus 372 ----~~Ig~iFl~~~~~f~~Y~~Y~~n~~~a~~~L~~~~------~~ffk~~~~-~l~~~l~L~slLikPVQRI~rY~LL 440 (732)
..||++|+++.+.|++|..||.|++.|.+++.++. ..|++.+.. ..+.+++|.+||++|||||+||+||
T Consensus 99 ~~~~~~ig~~f~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~~~~~~f~~~~~~~~~~~~~~~l~L~~~L~~PvQRi~rY~LL 178 (510)
T 3jzy_A 99 KMPVQMIGDILAAELSHMQAYIRFCSCQLNGAALLQQKTDEDTDFKEFLKKLASDPRCKGMPLSSFLLKPMQRITRYPLL 178 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCchhhHHHHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHhCccccCCCHHHHhChhhhhhcCcHHH
Confidence 47999999999999999999999999999998764 344554443 2456799999999999999999999
Q ss_pred HHHHHhcCc---ccHHHHHHHHHHHHHHhhhhhhHhhh-------hhhcc------cccc--------cccccccccccc
Q psy9950 441 LQQLMKASR---QDVKDIKEAESMVRFQLRHGNDLLAM-------DSLRE------CDVN--------LKEQGRLLRQNE 496 (732)
Q Consensus 441 LkeLlK~T~---~d~~dL~~Al~~v~~~~~~iNd~~~~-------~~i~~------~~~~--------L~~~grll~~g~ 496 (732)
|++|+|+|+ +|+.+|++|++.|+.++.++|+.+.. ..|+. .... +.+.|++|++|.
T Consensus 179 L~~llk~t~~~~~d~~~l~~A~~~i~~v~~~in~~~~~~e~~~~l~~l~~~l~~~g~~~~l~~~~~~~~~~~r~li~eG~ 258 (510)
T 3jzy_A 179 IRSILENTPESHADHSSLKLALERAEELCSQVNEGVREKENSDRLEWIQAHVQCEGLAEQLIFNSLTNCLGPRKLLHSGK 258 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccccccccccccccccceeEEece
Confidence 999999999 46677999999999999999986542 11211 1111 134588999999
Q ss_pred EEEEeCCCCeeEEEEEccCCeEEEEEeeeCC-CC----------CCCcceEEeeeeeecceEEEEecC--CCCCcEEEEE
Q psy9950 497 FIVSQGKGKKCLRHVFLFEELILFSKARRFP-DR----------KNLDLYIYKHSMKMSDIGITAQIG--DSSTKFEIWF 563 (732)
Q Consensus 497 l~v~~~~~kk~~r~vFLF~D~LL~~K~kk~~-~~----------~~~~~y~~K~~i~l~~i~v~e~~~--~~~~~F~I~~ 563 (732)
+.+. ++.++||+|||+|+|||||+++.. .. .+..+++||.+|++.++.|.+..+ +..+.|.|+.
T Consensus 259 l~~~---~~~~~~~~fLF~d~Ll~~k~~~~~~~~~g~~~~f~~~~~~~~~v~k~~i~l~~~~v~~~~d~~~~~~~F~i~~ 335 (510)
T 3jzy_A 259 LYKT---KSNKELHGFLFNDFLLLTYMVKQFAVSSGSEKLFSSKSNAQFKMYKTPIFLNEVLVKLPTDPSSDEPVFHISH 335 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEc---CCCcEEEEEcccceeEEeeecccccccCCcccccCcccccceeEEcCceehhheEEeccCCCCccccceeeec
Confidence 8764 245799999999999999976532 00 112344779999999999987533 3567788875
Q ss_pred eecCCCeEEEEEcCCHHHHHHHHHHHHHHHHHHHH
Q psy9950 564 RKRKPNETFTLQSMSEDIKQAWTDELSNLLWKQAL 598 (732)
Q Consensus 564 ~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i~~q~~ 598 (732)
. ..+|+|+|+|+++|+.|+++|+++++....
T Consensus 336 ~----~~~~~l~a~s~~ek~~W~~~i~~ai~~~~~ 366 (510)
T 3jzy_A 336 I----DRVYTLRTDNINERTAWVQKIKAASEQYID 366 (510)
T ss_dssp -----------------------------------
T ss_pred c----ceeEEeccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3 358999999999999999999999977643
No 18
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=100.00 E-value=1.6e-39 Score=398.28 Aligned_cols=294 Identities=19% Similarity=0.280 Sum_probs=233.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-CCchhhhhhHHHHhCCHHHHHHHHHHHHHHHHHHHhcCC-----
Q psy9950 298 KNLLFIMREMIQTERDYVKSLEYVILNYIPELTRE-DIPQALRGQRNVIFGNIEKIYEFHSQHFLGELEQCANLP----- 371 (732)
Q Consensus 298 ~kRq~iI~ELi~TE~~YV~~L~~l~~~y~~pL~~~-~~p~~l~~~~~~IF~NIe~I~~~Hs~~fL~~Le~~~~~~----- 371 (732)
.+|++||+||++||+.||++|+.++++|+.||... .+.. .+++..||+||++|+++| +.||.+|+.+...+
T Consensus 199 ~~~revI~ELi~TE~~YV~~L~~l~~~y~~pL~~~~~~l~--~~~~~~IF~Ni~~I~~~h-~~fL~~Le~~~~~~~~~~~ 275 (1049)
T 3ksy_A 199 QTYYDLVKAFMAEIRQYIRELNLIIKVFREPFVSNSKLFS--ANDVENIFSRIVDIHELS-VKLLGHIEDTVEMTDEGSP 275 (1049)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHCTTTSC--HHHHHHHHSSHHHHHHHH-HHHHHHHHHHHHHCCSSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCC--HHHHHHHhcCHHHHHHHH-HHHHHHHHHHHhccccCCc
Confidence 34779999999999999999999999999999965 2222 468899999999999999 69999999997632
Q ss_pred -CchHHHHhhhhh--hhhhHHHhhhch--HHHHHHHHHHh-----HHHHHHHHH--hhcCCCChhhhhhhhHhhHHhhHH
Q psy9950 372 -LSVGQCFLNHEN--KFYLYALYNKNK--PKSDALMTEYG-----SSFFKAKQL--ELADRMDLASYLLKPVQRMGKYAL 439 (732)
Q Consensus 372 -~~Ig~iFl~~~~--~f~~Y~~Y~~n~--~~a~~~L~~~~-----~~ffk~~~~--~l~~~l~L~slLikPVQRI~rY~L 439 (732)
..||++|+++++ .|.+|..||.|| +.|...++.+. ..|++.... +.+.+++|.+||++|||||+||+|
T Consensus 276 ~~~IgdiFl~~~~~~~F~~Y~~Yc~ny~~~~a~~~l~~l~~~~~f~~fl~~~~~~~~~~~~l~L~s~LikPvQRI~rY~L 355 (1049)
T 3ksy_A 276 HPLVGSCFEDLAEELAFDPYESYARDILRPGFHDRFLSQLSKPGAALYLQSIGEGFKEAVQYVLPRLLLAPVYHCLHYFE 355 (1049)
T ss_dssp SCCCHHHHHHHHHTTTTSHHHHHHHHHHCTTHHHHHHTTSSSTTHHHHHHHHCTTHHHHHHHTHHHHTTHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHhhhhHHHHHHHhhccHHHHHHHHHHhcChHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHhHHHH
Confidence 589999999976 779999999996 88899998875 345555322 245679999999999999999999
Q ss_pred HHHHHHhcCc--ccHHHHHHHHHHHHHHhhhhhhHhh--------------------------h-------hhhcccc-c
Q psy9950 440 LLQQLMKASR--QDVKDIKEAESMVRFQLRHGNDLLA--------------------------M-------DSLRECD-V 483 (732)
Q Consensus 440 LLkeLlK~T~--~d~~dL~~Al~~v~~~~~~iNd~~~--------------------------~-------~~i~~~~-~ 483 (732)
||++|+|+|+ +|+.+|++|+++|+.++.++|+.+. + ..+.++. .
T Consensus 356 LL~~LlK~Tp~~~D~~~L~~Al~~i~~v~~~VNe~~~~~~~k~r~~e~~~~~~~n~~kr~~e~~~~l~~lq~~i~~~~~~ 435 (1049)
T 3ksy_A 356 LLKQLEEKSEDQEDKECLKQAITALLNVQSGMEKICSKSLAKRRLSESACRFYSQQMKGKQLAIKKMNEIQKNIDGWEGK 435 (1049)
T ss_dssp HHHHHHHSCCCHHHHHHHHHHHHHTHHHHHHHHHHTTSTTHHHHHHHHC-------------CCSHHHHHHHTSSSCCSS
T ss_pred HHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccchhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCcc
Confidence 9999999998 6888999999999999999997320 1 1222221 1
Q ss_pred c-ccccccccccccEEEEeCCCCeeEEEEEccCCeEEEEEeeeCCC---CCCCcceEEeeeeeecceEEEEecCCCCCcE
Q psy9950 484 N-LKEQGRLLRQNEFIVSQGKGKKCLRHVFLFEELILFSKARRFPD---RKNLDLYIYKHSMKMSDIGITAQIGDSSTKF 559 (732)
Q Consensus 484 ~-L~~~grll~~g~l~v~~~~~kk~~r~vFLF~D~LL~~K~kk~~~---~~~~~~y~~K~~i~l~~i~v~e~~~~~~~~F 559 (732)
+ +...|++|++|.+.+.. ++++||+|||+|+|||||+++.+. +.....|.||..|++.++.|.+..++++..+
T Consensus 436 ~l~~~~r~Li~eG~l~~~~---~k~~r~~FLF~D~Ll~~K~~~~~~~~~g~~~~~y~~k~~i~L~~l~V~~~~d~~~~~~ 512 (1049)
T 3ksy_A 436 DIGQCCNEFIMEGTLTRVG---AKHERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDTNEYKH 512 (1049)
T ss_dssp CGGGTCSCCCCEEEEEETT---CSSCEEEEEETTEEEEEECCTTCCCCTTSCCCSCCCCCEECCSSCCCCCCCCSSSCCS
T ss_pred ccccccceEEEeceEEEEc---cCceEEEEeeCCeEEEEEecCccCCCCCCCCCceEEEEEEEcCceEEEECCCCccccc
Confidence 2 33468899999887643 348999999999999999874321 1124579999999999999988766554443
Q ss_pred EEEEeecCCCeEEEEEcCCHHHHHHHHHHHHHHHHHHHH
Q psy9950 560 EIWFRKRKPNETFTLQSMSEDIKQAWTDELSNLLWKQAL 598 (732)
Q Consensus 560 ~I~~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i~~q~~ 598 (732)
.+++.. ..++.|+|+|.|+++|+.|+++|+++..+...
T Consensus 513 ~F~I~~-~~~~~~~L~A~S~eeK~~Wi~~I~~~q~k~~~ 550 (1049)
T 3ksy_A 513 AFEIIL-KDENSVIFSAKSAEEKNNWMAALISLQYRSTL 550 (1049)
T ss_dssp EEEECC-TTSCCEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEc-CCCCEEEEeCCCHHHHHHHHHHHHHHHHHHHH
Confidence 333332 23479999999999999999999998765443
No 19
>1by1_A Protein (PIX); RHO-GTPase exchange factor, transport protein; NMR {Homo sapiens} SCOP: a.87.1.1
Probab=100.00 E-value=2.2e-33 Score=284.16 Aligned_cols=176 Identities=27% Similarity=0.473 Sum_probs=156.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhhhHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCC---c
Q psy9950 297 QKNLLFIMREMIQTERDYVKSLEYVILNYIPELTREDIPQALRGQRNVIFGNIEKIYEFHSQHFLGELEQCANLPL---S 373 (732)
Q Consensus 297 ~~kRq~iI~ELi~TE~~YV~~L~~l~~~y~~pL~~~~~p~~l~~~~~~IF~NIe~I~~~Hs~~fL~~Le~~~~~~~---~ 373 (732)
+.+|++||+||++||++||++|+.++++|+.||....+.. .+++..||+||++|+.+| ..||.+|+.+...|. .
T Consensus 11 ~~~R~~vi~ELi~TE~~Yv~~L~~l~~~y~~pl~~~~~l~--~~~~~~iF~ni~~i~~~h-~~fl~~L~~~~~~~~~~~~ 87 (209)
T 1by1_A 11 KSYYNVVLQNILETENEYSKELQTVLSTYLRPLQTSEKLS--SANISYLMGNLEEICSFQ-QMLVQSLEECTKLPEAQQR 87 (209)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSS--SSGGGTTHHHHHHHHHHH-HHHHHHHHHHHHTTCSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC--HHHHHHHHcCHHHHHHHH-HHHHHHHHHHHcCCcchhh
Confidence 3569999999999999999999999999999998765333 367899999999999999 699999999998764 8
Q ss_pred hHHHHhhhhhhhh-hHHHhhhchHHHHHHHHHHh---HHHHHHHHHhhcCCCChhhhhhhhHhhHHhhHHHHHHHHhcCc
Q psy9950 374 VGQCFLNHENKFY-LYALYNKNKPKSDALMTEYG---SSFFKAKQLELADRMDLASYLLKPVQRMGKYALLLQQLMKASR 449 (732)
Q Consensus 374 Ig~iFl~~~~~f~-~Y~~Y~~n~~~a~~~L~~~~---~~ffk~~~~~l~~~l~L~slLikPVQRI~rY~LLLkeLlK~T~ 449 (732)
||++|+++.+.|. +|..||.|++.|...+.++. ..|++.++...+++++|.+||++|||||+||+|||++|+|+|+
T Consensus 88 ig~~f~~~~~~f~~~Y~~Y~~n~~~a~~~l~~~~~~f~~fl~~~~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~Llk~t~ 167 (209)
T 1by1_A 88 VGGCFLNLMPQMKTLYLTYCANHPSAVNVLTEHSEELGEFMETKGASSPGILVLTTGLSKPFMRLDKYPTLLKELERHME 167 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHTTTTCCCSSTTTHHHHHTTSTTTGGGTHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHhcCCCCCcCCHHHHhhHHHHHHhHHHHHHHHHHhhCC
Confidence 9999999999995 99999999999999999885 3555555555567899999999999999999999999999999
Q ss_pred ---ccHHHHHHHHHHHHHHhhhhhhHhhh
Q psy9950 450 ---QDVKDIKEAESMVRFQLRHGNDLLAM 475 (732)
Q Consensus 450 ---~d~~dL~~Al~~v~~~~~~iNd~~~~ 475 (732)
+|+.+|++|++.|+.++.++|+..+.
T Consensus 168 ~~h~d~~~l~~Al~~i~~v~~~iNe~~r~ 196 (209)
T 1by1_A 168 DYHTDRQDIQKSMAAFKNLSAQCQEVRKR 196 (209)
T ss_dssp CCSSSTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57788999999999999999996553
No 20
>3jv3_A Intersectin-1; SH3 domain, DH domain, guanine nucleotide exchange factor, autoinhibition, domain-swapped, cell junction, cell project endocytosis; 2.40A {Mus musculus} PDB: 3gf9_A
Probab=99.97 E-value=2.4e-30 Score=273.03 Aligned_cols=179 Identities=20% Similarity=0.289 Sum_probs=156.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhhhHHHHhCCHHHHHHHHHHHHHHHHHHHhc---
Q psy9950 293 TLKTQKNLLFIMREMIQTERDYVKSLEYVILNYIPELTREDIPQALRGQRNVIFGNIEKIYEFHSQHFLGELEQCAN--- 369 (732)
Q Consensus 293 ~~k~~~kRq~iI~ELi~TE~~YV~~L~~l~~~y~~pL~~~~~p~~l~~~~~~IF~NIe~I~~~Hs~~fL~~Le~~~~--- 369 (732)
..+.+++|+++|+||++||++||++|+.++++|+.||....+.. ..++..||+||++|+.+| +.||.+|+.+..
T Consensus 76 l~~~e~kR~~vi~ELi~TE~~Yv~~L~~l~~~y~~~l~~~~~l~--~~~~~~iF~ni~~i~~~~-~~fl~~L~~~~~~~~ 152 (283)
T 3jv3_A 76 LTPTERKRQGYIHELIVTEENYVNDLQLVTEIFQKPLTESELLT--EKEVAMIFVNWKELIMCN-IKLLKALRVRKKMSG 152 (283)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHTTCSSC--HHHHHHHHTTHHHHHHHH-HHHHHHHHHHHHHHC
T ss_pred hcHHHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccccCCCC--HHHHHHHccCHHHHHHHH-HHHHHHHHHHHhccc
Confidence 34677899999999999999999999999999999998765443 467899999999999999 799999998764
Q ss_pred C---CCchHHHHhhhhhhhhhHHHhhhchHHHHHHHHHHh------HHHHHHHHH-hhcCCCChhhhhhhhHhhHHhhHH
Q psy9950 370 L---PLSVGQCFLNHENKFYLYALYNKNKPKSDALMTEYG------SSFFKAKQL-ELADRMDLASYLLKPVQRMGKYAL 439 (732)
Q Consensus 370 ~---~~~Ig~iFl~~~~~f~~Y~~Y~~n~~~a~~~L~~~~------~~ffk~~~~-~l~~~l~L~slLikPVQRI~rY~L 439 (732)
. ...||++|+++.+.|++|..||.|++.+..++..+. ..|++.+.. ..+.+++|.+||++|||||+||+|
T Consensus 153 ~~~~~~~ig~~f~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~~~~~~f~~~l~~~~~~~~~~~l~L~s~Li~PvQRi~rY~L 232 (283)
T 3jv3_A 153 EKMPVKMIGDILSAQLPHMQPYIRFCSCQLNGAALIQQKTDEAPDFKEFVKRLAMDPRCKGMPLSSFILKPMQRVTRYPL 232 (283)
T ss_dssp TTCCCCCCHHHHHHHGGGGTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHTTSGGGTTCCHHHHTTHHHHHHHHHHH
T ss_pred cCCchhHHHHHHHHHHhhchhHHHHHcCHHHHHHHHHHHHhcCHHHHHHHHHHHhCccccCCCHHHHhhhhHHHhcchHH
Confidence 2 257999999999999999999999999999998764 234444433 245779999999999999999999
Q ss_pred HHHHHHhcCc---ccHHHHHHHHHHHHHHhhhhhhHhh
Q psy9950 440 LLQQLMKASR---QDVKDIKEAESMVRFQLRHGNDLLA 474 (732)
Q Consensus 440 LLkeLlK~T~---~d~~dL~~Al~~v~~~~~~iNd~~~ 474 (732)
||++|+|+|+ +|+..|+.|++.|+.++.++|+.+.
T Consensus 233 LL~~llk~t~~~~~d~~~l~~A~~~i~~v~~~iNe~~r 270 (283)
T 3jv3_A 233 IIKNILENTPENHPDHSHLKHALEKAEELCSQVNEGVR 270 (283)
T ss_dssp HHHHHHTTSCTTSTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHhHHHH
Confidence 9999999998 5778899999999999999999764
No 21
>1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1
Probab=99.74 E-value=5.7e-19 Score=161.99 Aligned_cols=110 Identities=19% Similarity=0.288 Sum_probs=96.6
Q ss_pred ccccccccccccccEEEEeCCCCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecC-CCCCcEEE
Q psy9950 483 VNLKEQGRLLRQNEFIVSQGKGKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIG-DSSTKFEI 561 (732)
Q Consensus 483 ~~L~~~grll~~g~l~v~~~~~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~-~~~~~F~I 561 (732)
.+|..+|+|+++|+|.||++.+++++||||||+++|||||++. ..+...|+||..|+|++++++++++ +++++|++
T Consensus 2 G~L~~~G~Ll~q~~f~V~~~~~k~~eR~vFLFe~~ilf~K~~~---~~~~~~Y~~K~~ikl~~~~lte~~~~~d~~kFei 78 (119)
T 1fho_A 2 GDTGKLGRIIRHDAFQVWEGDEPPKLRYVFLFRNKIMFTEQDA---STSPPSYTHYSSIRLDKYNIRQHTTDEDTIVLQP 78 (119)
T ss_dssp CSCCCCCCSSEEEEEEECSTTCSCEEEEEEEETTEEEEEEECC---SSSSCCCSSCCEEESSSCEEEEECTTCCEEEEEC
T ss_pred CChHHcCCccccCceEEEeCCCCcceEEEEEecCcEEEEEEec---CCCCCcEEEeeEEeeceeEEEecCCCCCCcEEEE
Confidence 4688999999999999999866899999999999999999982 2567899999999999999999998 88889999
Q ss_pred EEeecCCCeEEEE--EcCCHH-HHHHHHHHHHHHHHHHH
Q psy9950 562 WFRKRKPNETFTL--QSMSED-IKQAWTDELSNLLWKQA 597 (732)
Q Consensus 562 ~~~~~~~~~~~~L--~A~S~e-eK~~Wi~~I~~~i~~q~ 597 (732)
|+.. ....|++ +|+|.+ .|+.|+++|+++++..+
T Consensus 79 w~~~--~~~~~il~~qA~s~e~~K~~Wv~~I~~~~~~~~ 115 (119)
T 1fho_A 79 QEPG--LPSFRIKPKDFETSEYVRKAWLRDIAEEQEKYA 115 (119)
T ss_dssp CSTT--CCCBCCCCCSSSSCSHHHHHHHHHHHTCCHHHH
T ss_pred ccCC--CCceEEEeeecCCcHHHHHHHHHHHHHHHHHHh
Confidence 9753 3467888 999999 99999999999654443
No 22
>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}
Probab=99.48 E-value=2.3e-14 Score=141.90 Aligned_cols=140 Identities=11% Similarity=0.257 Sum_probs=104.5
Q ss_pred cCc---ccHHHHHHHHHHHHHHhhhhhhHhhh-------hhhccc----c------------ccccccccccccccEEEE
Q psy9950 447 ASR---QDVKDIKEAESMVRFQLRHGNDLLAM-------DSLREC----D------------VNLKEQGRLLRQNEFIVS 500 (732)
Q Consensus 447 ~T~---~d~~dL~~Al~~v~~~~~~iNd~~~~-------~~i~~~----~------------~~L~~~grll~~g~l~v~ 500 (732)
||+ +|+.+|+.|++.|+.++.++|+.+.. ..|+.. . .+| ..|+|+++|.+.+.
T Consensus 2 ~T~~~~~e~~~L~~Al~~ik~i~~~VNe~vre~E~~~rL~eiq~~l~~~~~~~~~~~~~f~~~dL-~~R~Ll~eG~L~~k 80 (185)
T 2lg1_A 2 MTKDNEVEQEDLAQSLSLVKDVIGAVDSKVASYEKKVRLNEIYTKTDSKSIMRMKSGQMFAKEDL-KRKKLVRDGSVFLK 80 (185)
T ss_dssp CSSTTTSCCTTSCCSSSSSTTTSGGGGGGHHHHHHHHHHHHHHHSSCSSCCEECTTSCEECHHHH-TTSCEEEEEEEEEE
T ss_pred CCCCCcHhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccccccccccccccc-CCCceeeeceEEEe
Confidence 566 56778999999999999999986541 112211 0 012 23899999999977
Q ss_pred eCCCCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEe------eeeeecceEEEEecCCCCCcEEEEEeecCCCeEEEE
Q psy9950 501 QGKGKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYK------HSMKMSDIGITAQIGDSSTKFEIWFRKRKPNETFTL 574 (732)
Q Consensus 501 ~~~~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K------~~i~l~~i~v~e~~~~~~~~F~I~~~~~~~~~~~~L 574 (732)
..+++.+++|+|||+|+||||+++. ..|.++ ..|++..+.|.+...+. ..|-+......+...|+|
T Consensus 81 ~~~~~~~d~~~fLf~D~Ll~~~~~~-------~ky~~~~~~~~~pvi~L~~~~vre~a~d~-~~~fli~~~~~g~~~yel 152 (185)
T 2lg1_A 81 NAAGRLKEVQAVLLTDILVFLQEKD-------QKYIFASLDQKSTVISLKKLIVREVAHEE-KGLFLISMGMTDPEMVEV 152 (185)
T ss_dssp CTTCCEEEEEEEEESSEEECCEEET-------TEEECCCCSSSCSEEESSSCEEECCSSCS-SEEEEECCSSSCCCCEEE
T ss_pred ccCCCeeeEEEEeecCEEEEEEecC-------CEEEEEcccCCCCeEeecceEEeccCCCC-CeEEEEEecCCCCeEEEE
Confidence 7777788999999999999998862 356665 45899999998866644 444443222234689999
Q ss_pred EcCCHHHHHHHHHHHHHHHHH
Q psy9950 575 QSMSEDIKQAWTDELSNLLWK 595 (732)
Q Consensus 575 ~A~S~eeK~~Wi~~I~~~i~~ 595 (732)
+|.|.++|+.|++.|.+++..
T Consensus 153 ~a~s~~er~~W~~~I~~Ai~~ 173 (185)
T 2lg1_A 153 HASSKEERNSWIQIIQDTINT 173 (185)
T ss_dssp ECSSHHHHHHHHHHHHHHHHH
T ss_pred EcCCHHHHHHHHHHHHHHHHh
Confidence 999999999999999999855
No 23
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=99.21 E-value=1.4e-10 Score=108.14 Aligned_cols=108 Identities=15% Similarity=0.183 Sum_probs=78.1
Q ss_pred cccccccccccEEEEeCC-----CCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecCCCCCcEE
Q psy9950 486 KEQGRLLRQNEFIVSQGK-----GKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGDSSTKFE 560 (732)
Q Consensus 486 ~~~grll~~g~l~v~~~~-----~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~~~~~F~ 560 (732)
...+||+..+.+.-.... ...++|++|||||+|||||+... ++....|.++..+++..+.|...... ...|.
T Consensus 8 ~phRrlvc~~~l~ev~d~~K~~~kg~qqR~~FLFND~LL~TK~~~k--kk~~~~Y~vr~~~~L~gm~V~~~e~e-~~p~~ 84 (140)
T 3qwm_A 8 LPHRRLVCYCRLFEVPDPNKPQKLGLHQREIFLFNDLLVVTKIFQK--KKNSVTYSFRQSFSLYGMQVLLFENQ-YYPNG 84 (140)
T ss_dssp --CCCEEEEEEEEECSCTTSCCCTTTTEEEEEEESSCEEEEECCC-----CCCCCCCEEEECCTTEEEEEECCS-SCTTE
T ss_pred cCCceEEEEEeeeeeccCcccccccccceEEEEecchhhheeeccc--CCCCCceEEEEEeeecceEEEcccCC-CCceE
Confidence 356888888877543322 12369999999999999995432 12456899999999999999876433 34455
Q ss_pred EEEeecC----CCeEEEEEcCCHHHHHHHHHHHHHHHHHH
Q psy9950 561 IWFRKRK----PNETFTLQSMSEDIKQAWTDELSNLLWKQ 596 (732)
Q Consensus 561 I~~~~~~----~~~~~~L~A~S~eeK~~Wi~~I~~~i~~q 596 (732)
|++.... ....++|.|+|.++|..|+++|+++|.+-
T Consensus 85 ~~l~s~~~G~~~k~~i~~~A~s~~ER~rwi~dL~esI~e~ 124 (140)
T 3qwm_A 85 IRLTSSVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEV 124 (140)
T ss_dssp EEEEECCTTSCCEEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCCcceEEEEEECCCHHHHHHHHHHHHHHHHHH
Confidence 5544332 23679999999999999999999999664
No 24
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=99.16 E-value=4.9e-10 Score=101.89 Aligned_cols=99 Identities=14% Similarity=0.216 Sum_probs=76.2
Q ss_pred ccccccccEEEEeCC-CC-eeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecCCC--CCcEEEEEe
Q psy9950 489 GRLLRQNEFIVSQGK-GK-KCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGDS--STKFEIWFR 564 (732)
Q Consensus 489 grll~~g~l~v~~~~-~k-k~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~~--~~~F~I~~~ 564 (732)
+.+|.+|+++..+.. .+ .+.+|+|||||+||+|+++.. ....|.|...+++.++.|.+..+.+ .+.|.|.
T Consensus 6 R~lv~eG~l~el~~~~~k~~~~v~~FLfND~Ll~a~~~~~----~~~~~~~~~~~~L~~~~v~d~~d~~~~~n~f~i~-- 79 (113)
T 1zc3_B 6 QYLVYNGDLVEYEADHMAQLQRVHGFLMNDCLLVATWLPQ----RRGMYRYNALYPLDRLAVVNVKDNPPMKDMFKLL-- 79 (113)
T ss_dssp CCEEEEEEEEEEETTTCCEEEEEEEEEESSEEEEEEEECC----TTSCEEEEEEEETTTCEEEEECCBTTBSSEEEEE--
T ss_pred eEEEEeCcEEEEccccCCCCccEEEEecCCEEEEEEEecc----CcccEEEEEEEEcccCEEEECCCCcccceEEEEE--
Confidence 456779988866654 23 345799999999999999742 1123899999999999999865433 4556654
Q ss_pred ecCCCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q psy9950 565 KRKPNETFTLQSMSEDIKQAWTDELSNLLWK 595 (732)
Q Consensus 565 ~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i~~ 595 (732)
...++++++|.|+++|.+|+..|++++..
T Consensus 80 --~~~~s~~~~aes~~eK~~Wl~~~~~a~~~ 108 (113)
T 1zc3_B 80 --MFPESRIFQAENAKIKREWLEVLEETKRA 108 (113)
T ss_dssp --ETTEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred --eCCceEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 35679999999999999999999999754
No 25
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.13 E-value=1e-10 Score=108.80 Aligned_cols=109 Identities=17% Similarity=0.328 Sum_probs=87.5
Q ss_pred hhccc-cccccccccccccccEEEEeCC-CCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecC-
Q psy9950 477 SLREC-DVNLKEQGRLLRQNEFIVSQGK-GKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIG- 553 (732)
Q Consensus 477 ~i~~~-~~~L~~~grll~~g~l~v~~~~-~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~- 553 (732)
.|+++ ..++...|.++..+.+.+..+. +..++||+|||+++||+|++.. ....|.|+..|||..+.|++..+
T Consensus 13 ~I~gWeG~~i~~lG~ii~~s~v~~~~~~~~~~~eR~l~LF~~~Ll~~s~~~-----~~~~f~~kgklPL~g~~V~~~ed~ 87 (132)
T 1v61_A 13 PIQAWEGDDIKTLGNVIFMSQVVMQHGACEEKEERYFLLFSSVLIMLSASP-----RMSGFMYQGKIPIAGMVVNRLDEI 87 (132)
T ss_dssp CCBTCCSSCSTTTCCCSCEEEEEBCCSSSSCCCEEEEEECSSCEEEEECSS-----SSSCCEEEEEECTTTCBCSTTCSS
T ss_pred hhcccccCChhhcCCeEEEeeEEEEEcccCcceEEEEEEcCCeEEEEEecC-----CCceEEEEEEEecceeEEEecccc
Confidence 45555 3456778899998988887654 4568999999999999999752 23479999999999999887533
Q ss_pred -CCCCcEEEEEeecCCCeEEEEEcCCHHHHHHHHHHHHHHH
Q psy9950 554 -DSSTKFEIWFRKRKPNETFTLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 554 -~~~~~F~I~~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i 593 (732)
+..+.|+|. ....+++++.|+|.+|++.|+.+|++++
T Consensus 88 ~~~~~aFeI~---g~~~~~i~v~~~s~eE~~~Wl~~L~~~i 125 (132)
T 1v61_A 88 EGSDCMFEIT---GSTVERIVVHCNNNQDFQEWMEQLNRLT 125 (132)
T ss_dssp SSSCCCEEEE---CSSSCEEEECCCCSHHHHHHHHHHHHHH
T ss_pred ccCccEEEEe---cCCCceEEEEeCCHHHHHHHHHHHHHHH
Confidence 246789986 3334899999999999999999999986
No 26
>4gou_A EHRGS-rhogef; RGS domain, DH domain, PH domain, RHO guanine nucleotide EXC factor, signaling protein, GTPase accelerating protein; 2.30A {Entamoeba histolytica}
Probab=98.49 E-value=8.2e-06 Score=82.15 Aligned_cols=151 Identities=22% Similarity=0.379 Sum_probs=121.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhhhHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCCchHHHHhh
Q psy9950 301 LFIMREMIQTERDYVKSLEYVILNYIPELTREDIPQALRGQRNVIFGNIEKIYEFHSQHFLGELEQCANLPLSVGQCFLN 380 (732)
Q Consensus 301 q~iI~ELi~TE~~YV~~L~~l~~~y~~pL~~~~~p~~l~~~~~~IF~NIe~I~~~Hs~~fL~~Le~~~~~~~~Ig~iFl~ 380 (732)
..++..||+.|-+||--|..+.+ |-.-|.+..+.. .+-+..+|..|..|+..| +.|+..|++...+ ..+|.-+..
T Consensus 189 kslvesliqdecnyvgvltslse-fseimtkkqilg--pdvlkelfdhipvliqhh-qkfisslqeakad-ekvgeklns 263 (518)
T 4gou_A 189 KSLVESLIQDECNYVGVLTSLSE-FSEIMTKKQILG--PDVLKELFDHIPVLIQHH-QKFISSLQEAKAD-EKVGEKLNS 263 (518)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHTTCSC--HHHHHHHHTTHHHHHHHH-HHHHHHHTSTTGG-GSHHHHHHH
T ss_pred HHHHHHHHHhhccceeehhhHHH-HHHHHHhhhccC--hHHHHHHHhhchHHHHHH-HHHHHHHHHhhhh-HHHHHhhcc
Confidence 45789999999999999988765 767776555543 345789999999999999 8999998776543 368888877
Q ss_pred hhhhhhhHHHhhhchHHHHHHHHHHh--------H-----HHHH--HHHHhhcCCCChhhhhhhhHhhHHhhHHHHHHHH
Q psy9950 381 HENKFYLYALYNKNKPKSDALMTEYG--------S-----SFFK--AKQLELADRMDLASYLLKPVQRMGKYALLLQQLM 445 (732)
Q Consensus 381 ~~~~f~~Y~~Y~~n~~~a~~~L~~~~--------~-----~ffk--~~~~~l~~~l~L~slLikPVQRI~rY~LLLkeLl 445 (732)
-..++-+|.-|..+.|+..+.|...+ . ...+ .+++...++|++-.+|+-|--|+..|+-...+.+
T Consensus 264 glhflvlyryylrhvpkniaklcsigmtdeievgrelyplpvieefdkqqkmtkkmsvlqmlvypyfrvrtyqayvddfi 343 (518)
T 4gou_A 264 GLHFLVLYRYYLRHVPKNIAKLCSIGMTDEIEVGRELYPLPVIEEFDKQQKMTKKMSVLQMLVYPYFRVRTYQAYVDDFI 343 (518)
T ss_dssp HTGGGGGGHHHHTTTTHHHHHHHHHHTSCGGGTTTTTCSHHHHHHHHHHHHHHTSCCHHHHHHGGGGHHHHHHHHHHHHH
T ss_pred CceehHHHHHHHHhccHHHHHHccCCCcchhhccccccCcchHHHHHHHHHHHHHHHHHHHHhhhhheehhHHHHHHHHH
Confidence 77788999999999999998887664 0 1111 2456678899999999999999999999999999
Q ss_pred hcCcccHHHHH
Q psy9950 446 KASRQDVKDIK 456 (732)
Q Consensus 446 K~T~~d~~dL~ 456 (732)
|-|..|..+++
T Consensus 344 kitkkdsqevk 354 (518)
T 4gou_A 344 KITKKDSQEVK 354 (518)
T ss_dssp HHSCTTCHHHH
T ss_pred HhhhcchHHHH
Confidence 99986655443
No 27
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=97.83 E-value=0.0001 Score=64.89 Aligned_cols=94 Identities=13% Similarity=0.186 Sum_probs=66.6
Q ss_pred ccccccccEEEEeCC-CCeeEEEEEccCC--eEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecCC-------CCCc
Q psy9950 489 GRLLRQNEFIVSQGK-GKKCLRHVFLFEE--LILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGD-------SSTK 558 (732)
Q Consensus 489 grll~~g~l~v~~~~-~kk~~r~vFLF~D--~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~-------~~~~ 558 (732)
+..+++|.+....+. +.-+.|+++|.++ .|.+.+... ....+..|+|.++.+...... ..+.
T Consensus 5 ~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yyk~~~--------~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~ 76 (109)
T 2i5f_A 5 GVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAG--------AEDPLGAIHLRGCVVTSVESNSNGRKSEEENL 76 (109)
T ss_dssp CCEEEEEEEEEECTTTCCEEEEEEEEETTTTEEEEECTTS--------CSSCSEEEECTTCEEEEECC--------CCSE
T ss_pred CceeEEEEEEEcCCCCCCceEEEEEEeCCCcEEEEECCCC--------CCCccEEEECCCCEEEEccCCcccccCCCceE
Confidence 556788887765433 3446899999988 777776431 123466788888776654332 4567
Q ss_pred EEEEEeecCCCeEEEEEcCCHHHHHHHHHHHHHHH
Q psy9950 559 FEIWFRKRKPNETFTLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 559 F~I~~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i 593 (732)
|.|.. ....+|.|+|.|+++++.|+.+|+.++
T Consensus 77 F~i~~---~~~~~~~l~a~s~~e~~~Wi~ai~~~~ 108 (109)
T 2i5f_A 77 FEIIT---ADEVHYFLQAATPKERTEWIKAIQMAS 108 (109)
T ss_dssp EEEEC---TTCCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEEe---CCCCEEEEEcCCHHHHHHHHHHHHHHh
Confidence 87752 234679999999999999999999876
No 28
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.73 E-value=0.0002 Score=63.63 Aligned_cols=96 Identities=13% Similarity=0.169 Sum_probs=68.5
Q ss_pred cccccccccEEEEeCC-CCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecC---CCCCcEEEEE
Q psy9950 488 QGRLLRQNEFIVSQGK-GKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIG---DSSTKFEIWF 563 (732)
Q Consensus 488 ~grll~~g~l~v~~~~-~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~---~~~~~F~I~~ 563 (732)
.+..+++|.+....+. +.-+.|+++|.++.|.+.+.... ...+..|+|..+...+... ...+.|.|.
T Consensus 5 ~~~~~~~G~L~K~~~~~~~Wk~R~fvL~~~~L~yy~~~~~--------~~~~g~i~L~~~~~v~~~~~~~~~~~~F~i~- 75 (115)
T 2dn6_A 5 SSGVLKQGYMMKKGHRRKNWTERWFVLKPNIISYYVSEDL--------KDKKGDILLDENCCVESLPDKDGKKCLFLVK- 75 (115)
T ss_dssp CCSCSEEEEEEEECTTSSCEEEEEEEECSSCEEEESSTTC--------SSEEEEECCCTTCEEEEECCCTTCCSEEEEE-
T ss_pred CCCceEEEEEEecCCCCCCcEEeEEEEECCEEEEeCCCCC--------cccCcEEEecCcEEEEECCCCCCCeeEEEEE-
Confidence 3556788888765433 34568999999999998875421 2347788888754333322 234677774
Q ss_pred eecCCCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q psy9950 564 RKRKPNETFTLQSMSEDIKQAWTDELSNLLWK 595 (732)
Q Consensus 564 ~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i~~ 595 (732)
.+..+|.|+|.|+++++.|++.|+.++..
T Consensus 76 ---~~~r~~~l~a~s~~e~~~Wi~ai~~~~~~ 104 (115)
T 2dn6_A 76 ---CFDKTFEISASDKKKKQEWIQAIHSTIHL 104 (115)
T ss_dssp ---CSSCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred ---eCCCEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 45678999999999999999999999743
No 29
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=97.68 E-value=9.9e-05 Score=64.67 Aligned_cols=96 Identities=15% Similarity=0.200 Sum_probs=68.2
Q ss_pred ccccccccEEEEeCC-----CCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEec---C--CCCCc
Q psy9950 489 GRLLRQNEFIVSQGK-----GKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQI---G--DSSTK 558 (732)
Q Consensus 489 grll~~g~l~v~~~~-----~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~---~--~~~~~ 558 (732)
|..+++|.+....+. +.-+.|+++|.++.|.+.+.... ...+..|+|.++.+.... . ...+.
T Consensus 1 g~v~~~G~L~K~~~~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~--------~~~~g~i~L~~~~v~~~~~~~~~~~~~~~ 72 (108)
T 1u5d_A 1 GSVIKQGYLEKKSKDHSFFGSEWQKRWCVVSRGLFYYYANEKS--------KQPKGTFLIKGYSVRMAPHLRRDSKKESC 72 (108)
T ss_dssp CCEEEEEEEEEEEECSSSSCEEEEEEEEEEETTEEEEESSTTC--------SSCSEEEECTTCEEEECGGGCSSGGGGGE
T ss_pred CCccEEEEEEEcCCCCCccccCceeeEEEEeCCEEEEecCCCC--------CCCCEEEEecceEEEeCCccccccCCcce
Confidence 356778888776543 23367999999999988875421 224567889888876542 1 12456
Q ss_pred EEEEEeecCCCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q psy9950 559 FEIWFRKRKPNETFTLQSMSEDIKQAWTDELSNLLWK 595 (732)
Q Consensus 559 F~I~~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i~~ 595 (732)
|.|.. ....+|.|+|.|+++++.|+.+|+.+|..
T Consensus 73 F~i~~---~~~r~~~l~a~s~~e~~~Wi~ai~~~i~~ 106 (108)
T 1u5d_A 73 FELTS---QDRRTYEFTATSPAEARDWVDQISFLLKD 106 (108)
T ss_dssp EEEEC---SSSCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEc---CCCcEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 77752 23479999999999999999999999743
No 30
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=97.67 E-value=0.00015 Score=66.19 Aligned_cols=96 Identities=13% Similarity=0.174 Sum_probs=67.6
Q ss_pred ccccccccccEEEEeCC-CCeeEEEEEccCC--eEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecCC-------CC
Q psy9950 487 EQGRLLRQNEFIVSQGK-GKKCLRHVFLFEE--LILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGD-------SS 556 (732)
Q Consensus 487 ~~grll~~g~l~v~~~~-~kk~~r~vFLF~D--~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~-------~~ 556 (732)
..+..+++|.+....+. +.-+.|+++|.++ .|.+.+... ....+..|+|..+.+...... ..
T Consensus 14 ~~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yy~~~~--------~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~ 85 (129)
T 1x05_A 14 FRGVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAG--------AEDPLGAIHLRGCVVTSVESNSNGRKSEEE 85 (129)
T ss_dssp TCSEEEEEEEEEECCSSCCCCEEEEEEEEETTTEEEEECSSC--------CSSCSEEEECTTCEEEECCCCCCSSSCSSC
T ss_pred ccCCceEEEEEEecCCCCCCCeeEEEEEeCCCCEEEEECCCC--------CCcceeEEEccCCEEEEccCCccccccCCC
Confidence 34667788887765332 2346899999987 677776431 123466788988877654332 45
Q ss_pred CcEEEEEeecCCCeEEEEEcCCHHHHHHHHHHHHHHH
Q psy9950 557 TKFEIWFRKRKPNETFTLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 557 ~~F~I~~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i 593 (732)
+.|.|.. ....+|.|+|.|+++++.|+.+|+.++
T Consensus 86 ~~F~i~~---~~~~~~~l~a~s~~e~~~Wi~al~~~~ 119 (129)
T 1x05_A 86 NLFEIIT---ADEVHYFLQAATPKERTEWIKAIQMAS 119 (129)
T ss_dssp SEEEEEC---TTCCCCEEECSSHHHHHHHHHHHHHHH
T ss_pred eEEEEEc---CCCCEEEEECCCHHHHHHHHHHHHHHH
Confidence 6777752 234679999999999999999999986
No 31
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.66 E-value=0.00023 Score=63.59 Aligned_cols=92 Identities=20% Similarity=0.164 Sum_probs=68.0
Q ss_pred ccccccccEEEEeC--CCCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecCCCCCcEEEEEeec
Q psy9950 489 GRLLRQNEFIVSQG--KGKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGDSSTKFEIWFRKR 566 (732)
Q Consensus 489 grll~~g~l~v~~~--~~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~~~~~F~I~~~~~ 566 (732)
...+++|.+....+ .+.-+.|+++|.++.|.+.+.... ...+..|+|..+......+ .+.|.|.
T Consensus 6 ~~~~~~G~L~K~~~~~~~~WkkR~fvL~~~~L~yy~~~~~--------~~~~g~i~l~~~~~v~~~~--~~~F~i~---- 71 (115)
T 2cod_A 6 SGKVKSGWLDKLSPQGKRMFQKRWVKFDGLSISYYNNEKE--------MYSKGIIPLSAISTVRVQG--DNKFEVV---- 71 (115)
T ss_dssp SCCCEEEEEEECCSSSSSCCEEEEEEECSSEEEEEESSCC--------SSCCCEEETTTEEEEEEET--TTEEEEE----
T ss_pred CCccEEEEEEEcCCCCCCCCceEEEEEECCEEEEEcCCCC--------cccCCEEECCcceEEEeCC--CCEEEEE----
Confidence 45677888776544 134568999999999998886531 1246678888875444433 5788885
Q ss_pred CCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q psy9950 567 KPNETFTLQSMSEDIKQAWTDELSNLLW 594 (732)
Q Consensus 567 ~~~~~~~L~A~S~eeK~~Wi~~I~~~i~ 594 (732)
.+..+|.|+|.|+++++.|++.|+.++.
T Consensus 72 ~~~r~~~l~a~s~~e~~~Wi~~l~~~~~ 99 (115)
T 2cod_A 72 TTQRTFVFRVEKEEERNDWISILLNALK 99 (115)
T ss_dssp ESSCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred eCCcEEEEECCCHHHHHHHHHHHHHHHH
Confidence 3467999999999999999999999873
No 32
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.61 E-value=0.00027 Score=62.80 Aligned_cols=93 Identities=16% Similarity=0.196 Sum_probs=66.8
Q ss_pred cccccccEEEEeCC-CCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEec---CCCCCcEEEEEee
Q psy9950 490 RLLRQNEFIVSQGK-GKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQI---GDSSTKFEIWFRK 565 (732)
Q Consensus 490 rll~~g~l~v~~~~-~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~---~~~~~~F~I~~~~ 565 (732)
..+++|.+....+. +.-+.|+++|.++.|.+.+... ....+..|+|..+.+.... ....+.|.|..
T Consensus 4 ~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~--------~~~~~g~i~L~~~~~~~~~~~~~~~~~~F~i~~-- 73 (113)
T 1pls_A 4 KRIREGYLVKKGSVFNTWKPMWVVLLEDGIEFYKKKS--------DNSPKGMIPLKGSTLTSPCQDFGKRMFVFKITT-- 73 (113)
T ss_dssp CCSEEEEEEEESSSSSCCEEEEEEEETTEEEEESSTT--------CSSCSEEEESSSCCEESSCCSSCCSSSEEEEEE--
T ss_pred CCcEEEEEEEeCCCCCCceEEEEEEECCEEEEEeCCC--------CCCcceEEEcCCCEEEEecCCCCCCccEEEEEc--
Confidence 45677777765332 3456899999999988887542 1234567888888776422 22345787753
Q ss_pred cCCCeEEEEEcCCHHHHHHHHHHHHHHH
Q psy9950 566 RKPNETFTLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 566 ~~~~~~~~L~A~S~eeK~~Wi~~I~~~i 593 (732)
....+|.|+|.|+++++.|+..|+.++
T Consensus 74 -~~~r~~~l~a~s~~e~~~Wi~ai~~~~ 100 (113)
T 1pls_A 74 -TKQQDHFFQAAFLEERDAWVRDINKAI 100 (113)
T ss_dssp -TTTEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred -CCCCEEEEECCCHHHHHHHHHHHHHHH
Confidence 335899999999999999999999987
No 33
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.59 E-value=0.0002 Score=63.89 Aligned_cols=97 Identities=12% Similarity=0.082 Sum_probs=69.9
Q ss_pred ccccccccEEEEeCC-CCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecC----CCCCcEEEEE
Q psy9950 489 GRLLRQNEFIVSQGK-GKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIG----DSSTKFEIWF 563 (732)
Q Consensus 489 grll~~g~l~v~~~~-~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~----~~~~~F~I~~ 563 (732)
+..+++|.+....+. +.-+.|+++|.++.|.+.+.... ...+..|+|..+.+.+... ...+.|.|..
T Consensus 6 ~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~--------~~~~g~i~L~~~~v~~~~~~~~~~~~~~f~i~~ 77 (118)
T 1v89_A 6 SGPIKMGWLKKQRSIVKNWQQRYFVLRAQQLYYYKDEED--------TKPQGCMYLPGCTIKEIATNPEEAGKFVFEIIP 77 (118)
T ss_dssp SCEEEEEEEEEECSSSSCEEEEEEEEETTEEEEESSSSC--------CSCSEEECSTTEEEEEECCCSSCCCCCEEEEEE
T ss_pred CCCcEEEEEEecCCCCCCccEEEEEEECCEEEEEeCCCC--------CCceEEEECCCCEEEEcCcCcccCCcceEEEEC
Confidence 456778887765433 34578999999999988875421 2346778888888776432 2345777764
Q ss_pred eec----CCCeEEEEEcCCHHHHHHHHHHHHHHH
Q psy9950 564 RKR----KPNETFTLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 564 ~~~----~~~~~~~L~A~S~eeK~~Wi~~I~~~i 593 (732)
... ....+|.|+|.|+++++.|+++|+.++
T Consensus 78 ~~~~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~ 111 (118)
T 1v89_A 78 ASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVA 111 (118)
T ss_dssp SCCSSCCSSCCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred CccccccCCCcEEEEECCCHHHHHHHHHHHHHHH
Confidence 211 256799999999999999999999986
No 34
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=97.58 E-value=0.00032 Score=63.58 Aligned_cols=99 Identities=9% Similarity=0.061 Sum_probs=64.3
Q ss_pred ccccccccEEEEeCC-CCeeEEEEEccCC-eEEEEEeeeCCCCCCCcceEEeeeeeecceEE-----EEecCCCCCcEEE
Q psy9950 489 GRLLRQNEFIVSQGK-GKKCLRHVFLFEE-LILFSKARRFPDRKNLDLYIYKHSMKMSDIGI-----TAQIGDSSTKFEI 561 (732)
Q Consensus 489 grll~~g~l~v~~~~-~kk~~r~vFLF~D-~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v-----~e~~~~~~~~F~I 561 (732)
...+++|.+....+. +.-+.|+++|-.| .|.+-+.... ...+..|+|..+.+ ........+.|.|
T Consensus 6 ~~~~~~G~L~K~g~~~k~WkkRwfvL~~~~~L~yy~~~~~--------~~~~g~i~L~~~~~~~~~~~~~~~~~~~~F~I 77 (125)
T 1unq_A 6 VAIVKEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQ--------DVDQREAPLNNFSVAQCQLMKTERPRPNTFII 77 (125)
T ss_dssp GCEEEEEEEEEECSSSCCEEEEEEEEETTSEEEEESSCCC--------SHHHHTSCSEEEECTTCEEEEECSSSTTEEEE
T ss_pred CCeeEEeeEEeccCCccCccCcEEEEecCCEEEEEeCCCC--------CCCCceeEccceeEEeeeecccccCCCCEEEE
Confidence 456777877765332 3456788889866 7777765421 01233445544432 2223345678988
Q ss_pred EEeecCCCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q psy9950 562 WFRKRKPNETFTLQSMSEDIKQAWTDELSNLLWK 595 (732)
Q Consensus 562 ~~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i~~ 595 (732)
.........+|.|+|.|+++++.|+.+|+.++..
T Consensus 78 ~~~~~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~ 111 (125)
T 1unq_A 78 RCLQWTTVIERTFHVETPEEREEWTTAIQTVADG 111 (125)
T ss_dssp EEEETTEEEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EecCCCCceeEEEEeCCHHHHHHHHHHHHHHHhh
Confidence 6543345579999999999999999999999744
No 35
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=97.57 E-value=0.00024 Score=68.34 Aligned_cols=94 Identities=13% Similarity=0.159 Sum_probs=65.3
Q ss_pred ccccccccEEEEeCCC------CeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecCCC-------
Q psy9950 489 GRLLRQNEFIVSQGKG------KKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGDS------- 555 (732)
Q Consensus 489 grll~~g~l~v~~~~~------kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~~------- 555 (732)
...|++|.|....... +-+.|+++|-++.|.+-|.... ....+..|+|..+...+...++
T Consensus 13 ~~~i~EG~L~Kr~~~kk~~~~knWKkRwFVL~~~~L~Yyk~~~~-------~~~~~G~I~L~~~~~v~~~~~~~~~~~~~ 85 (164)
T 2lul_A 13 FNTILEEILIKRSQQKKKTSPLNYKERLFVLTKSMLTYYEGRAE-------KKYRKGFIDVSKIKCVEIVKNDDGVIPCQ 85 (164)
T ss_dssp SSEEEEEEEEEECCCCSSSCCCCEEEEEEEEESSEEEEECCCSS-------SCCCCCEEEGGGCCEEEECCCCSSSCCSS
T ss_pred CCeeEEEEEEEecCCCCCCCCCCceeEEEEEECCEEEEEeccCc-------ccccccEEEEeeeEEEEeccccccCcccc
Confidence 3567778776543221 2368999999999998875421 1124567888887766544332
Q ss_pred -CCcEEEEEeecCCCeEEEEEcCCHHHHHHHHHHHHHHH
Q psy9950 556 -STKFEIWFRKRKPNETFTLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 556 -~~~F~I~~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i 593 (732)
...|.| ..+..+|.|+|.|++++++|+++|+++|
T Consensus 86 ~~~~f~i----~t~~rt~~l~A~s~~e~~~Wi~aL~~~i 120 (164)
T 2lul_A 86 NKYPFQV----VHDANTLYIFAPSPQSRDLWVKKLKEEI 120 (164)
T ss_dssp SCSEEEE----ECSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred cceeEEE----ecCCcEEEEECCCHHHHHHHHHHHHHHH
Confidence 234544 3566899999999999999999999986
No 36
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=97.55 E-value=0.00054 Score=62.51 Aligned_cols=98 Identities=14% Similarity=0.116 Sum_probs=67.3
Q ss_pred ccccccEEEEeCC-CCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecCC----------CCCcE
Q psy9950 491 LLRQNEFIVSQGK-GKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGD----------SSTKF 559 (732)
Q Consensus 491 ll~~g~l~v~~~~-~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~----------~~~~F 559 (732)
.+++|.+...... ..-+.|+++|-.+.|.+-|.... . ..-.....|+|.++.|.....+ .+++|
T Consensus 6 ~~k~G~L~Kk~~~~k~W~~rwfVL~~~~L~yyK~~~~---~--~d~~P~gsI~L~~c~v~~~~~~~~~~~~~~~~~~~~F 80 (120)
T 4a6h_A 6 EIKSGFLERRSKFLKSYSKGYYVLTPNFLHEFKTADR---K--KDLVPVMSLALSECTVTEHSRKNSTSSPNSTGSDAKF 80 (120)
T ss_dssp CSEEEEEEEEETTTTEEEEEEEEECSSEEEEESSCCT---T--TCCSCSEEEEGGGEEEEEECCCCC---------CCEE
T ss_pred ccEEEEEEEcCCCCCCCccEEEEEeCCEEEEEcCCCc---C--cCCCceEEEECCCCEEEEcccccccccccccCCCcEE
Confidence 5677777665433 23467899999997777764321 0 1122567899999999886544 35677
Q ss_pred EEEEeecC---CCeEEEEEcCCHHHHHHHHHHHHHHH
Q psy9950 560 EIWFRKRK---PNETFTLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 560 ~I~~~~~~---~~~~~~L~A~S~eeK~~Wi~~I~~~i 593 (732)
.|...... ...+|+|+|.|.++++.|+++|+.++
T Consensus 81 ~i~~~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~ 117 (120)
T 4a6h_A 81 VLHAKQNGIIRRGHNWVFKADSYESMMSWFDNLKILT 117 (120)
T ss_dssp EEEESSSSSSCTTCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred EEEeCCCCcccCceEEEEEcCCHHHHHHHHHHHHHHh
Confidence 77643211 24699999999999999999999874
No 37
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=97.54 E-value=0.00056 Score=66.13 Aligned_cols=95 Identities=12% Similarity=0.135 Sum_probs=68.3
Q ss_pred ccccccEEEEeCC------CCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEec---CCCC-----
Q psy9950 491 LLRQNEFIVSQGK------GKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQI---GDSS----- 556 (732)
Q Consensus 491 ll~~g~l~v~~~~------~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~---~~~~----- 556 (732)
+|++|.|...... ..-+.|+++|-++.|.+.|.... .......+..|+|.++.+.+.+ ++..
T Consensus 3 vikeG~L~Kr~~~~~~~~~k~WKkRwFVL~~~~L~Yyk~~~~----~~~~~~~~G~I~L~~~~~ve~~~~~~~~~~~~~~ 78 (169)
T 1btk_A 3 VILESIFLKRSQQKKKTSPLNFKKCLFLLTVHKLSYYEYDFE----RGRRGSKKGSIDVEKITCVETVVPEKNPPPERQI 78 (169)
T ss_dssp CCEEEEEEEECCCSSTTCCCCEEEEEEEECSSEEEEEEEETT----TTEEEEEEEEEEGGGEEEEEECCCCSSCCGGGCC
T ss_pred eEEEEEEEEecCCCCCcccCCCceEEEEEcCCEEEEEecCCc----cCCCCceeeEEECcceEEEEeccCCCCcchhccc
Confidence 5778887765321 13478999999999999986310 0124578899999998876654 2221
Q ss_pred --------------------CcEEEEEeecCCCeEEEEEcCCHHHHHHHHHHHHHHH
Q psy9950 557 --------------------TKFEIWFRKRKPNETFTLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 557 --------------------~~F~I~~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i 593 (732)
+.|.|. .+..+|.|+|.|++++++|+++|+.+|
T Consensus 79 ~~~~~~~~~~~~~~i~~~~~~~F~I~----t~~rt~yl~A~s~~E~~eWi~aI~~~i 131 (169)
T 1btk_A 79 PRRGEESSEMEQISIIERFPYPFQVV----YDEGPLYVFSPTEELRKRWIHQLKNVI 131 (169)
T ss_dssp ---------CCTTHHHHCCCEEEEEE----ETTCCEEEEESCHHHHHHHHHHHHHHH
T ss_pred ccccCcccccccccccccccccEEEE----eCCceEEEEcCCHHHHHHHHHHHHHHH
Confidence 345554 344789999999999999999999986
No 38
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=97.52 E-value=0.00028 Score=61.68 Aligned_cols=90 Identities=14% Similarity=0.131 Sum_probs=63.5
Q ss_pred cccEEEEeCC-CCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecCCCCCcEEEEEeecCCCeEE
Q psy9950 494 QNEFIVSQGK-GKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGDSSTKFEIWFRKRKPNETF 572 (732)
Q Consensus 494 ~g~l~v~~~~-~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~~~~~F~I~~~~~~~~~~~ 572 (732)
+|.+....+. +.-+.|+++|.++.|.+.+..... ....+..|+|..+.+.... ++++.|.|.. .+..+|
T Consensus 2 eG~L~K~g~~~k~Wk~R~fvL~~~~L~Yy~~~~~~------~~~~~g~i~L~~~~v~~~~-~~~~~F~i~~---~~~r~~ 71 (103)
T 3rcp_A 2 EGVLYKWTNYLTGWQPRWFVLDNGILSYYDSQDDV------CKGSKGSIKMAVCEIKVHS-ADNTRMELII---PGEQHF 71 (103)
T ss_dssp EEEEEEECCTTTCEEEEEEEEETTEEEEESSCC---------CCCSCEEEGGGCEEECCT-TCSSEEEEEE---TTTEEE
T ss_pred ceEEEEccCCCCCeeceEEEEECCEEEEEecCCcc------cCCcccEEEeeeeEEEEcC-CCCceEEEEe---CCCCEE
Confidence 3444443322 245689999999999888765310 1123678888888776543 3567888863 346899
Q ss_pred EEEcCCHHHHHHHHHHHHHHH
Q psy9950 573 TLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 573 ~L~A~S~eeK~~Wi~~I~~~i 593 (732)
.|+|.|+++++.|+++|+.++
T Consensus 72 ~l~a~s~~e~~~Wi~al~~a~ 92 (103)
T 3rcp_A 72 YMKAVNAAERQRWLVALGSSK 92 (103)
T ss_dssp EEECSSHHHHHHHHHHHHTTS
T ss_pred EEECCCHHHHHHHHHHHHHHH
Confidence 999999999999999998874
No 39
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=97.52 E-value=0.00044 Score=62.38 Aligned_cols=96 Identities=15% Similarity=0.119 Sum_probs=68.7
Q ss_pred cccccccccEEEEeCC-CCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecC-----CCCCcEEE
Q psy9950 488 QGRLLRQNEFIVSQGK-GKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIG-----DSSTKFEI 561 (732)
Q Consensus 488 ~grll~~g~l~v~~~~-~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~-----~~~~~F~I 561 (732)
....+++|.+....+. +.-+.|+++|.++.|.+.+.... ...+..|+|.++....... ...+.|.|
T Consensus 11 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~--------~~~~g~i~l~~~~~v~~~~~~~~~~~~~~F~i 82 (125)
T 1eaz_A 11 DSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELE--------KEPLRVIPLKEVHKVQECKQSDIMMRDNLFEI 82 (125)
T ss_dssp -CCCSEEEEEEEECTTTCCEEEEEEEECSSEEEEESSTTC--------SSCSEEEEGGGCCEEEECTTHHHHTCSSEEEE
T ss_pred CCCccEEEEEEEeCCCCCCcceEEEEEeCCEEEEEcCCCC--------CcceeEEEcccceEEeeccccccCCcCCEEEE
Confidence 3556778888765432 34568999999999988875421 2245678888875444321 34567887
Q ss_pred EEeecCCCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q psy9950 562 WFRKRKPNETFTLQSMSEDIKQAWTDELSNLLWK 595 (732)
Q Consensus 562 ~~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i~~ 595 (732)
. .+..+|.|+|.|+++++.|+..|+.+|..
T Consensus 83 ~----~~~r~~~l~a~s~~e~~~W~~al~~~i~~ 112 (125)
T 1eaz_A 83 V----TTSRTFYVQADSPEEMHSWIKAVSGAIVA 112 (125)
T ss_dssp E----CSSCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred E----eCCcEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence 5 35679999999999999999999999743
No 40
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.51 E-value=0.00017 Score=65.77 Aligned_cols=97 Identities=12% Similarity=0.221 Sum_probs=65.7
Q ss_pred ccccccccccEEEEeCC-CCeeEEEEEccCC--eEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecCC---------
Q psy9950 487 EQGRLLRQNEFIVSQGK-GKKCLRHVFLFEE--LILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGD--------- 554 (732)
Q Consensus 487 ~~grll~~g~l~v~~~~-~kk~~r~vFLF~D--~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~--------- 554 (732)
..+.++++|.+....+. +.-+.|+++|..| .|.+.+... .....+..|+|..+.+......
T Consensus 14 ~~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~d~~~L~yy~~~~-------~~~~~~g~i~L~~~~v~~~~~~~~p~~~~~~ 86 (129)
T 1x1g_A 14 LSGTVVKQGYLAKQGHKRKNWKVRRFVLRKDPAFLHYYDPSK-------EENRPVGGFSLRGSLVSALEDNGVPTGVKGN 86 (129)
T ss_dssp TCSEEEEEEEEEEECSSSSSEEEEEEEEEESSCEEEEECSSS-------CCSSCSCCEESTTCCCEECCSSSSCSSCSSC
T ss_pred cCCCEEEEEEEEEECCCCCCeeeEEEEEeCCCCeEEEeCCCC-------cCCccceEEECcCCEEEEeCCCCCcccccCC
Confidence 34667888888876433 3456889999954 666665431 0123456788887666543322
Q ss_pred -CCCcEEEEEeecCCCeEEEEEcCCHHHHHHHHHHHHHHH
Q psy9950 555 -SSTKFEIWFRKRKPNETFTLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 555 -~~~~F~I~~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i 593 (732)
..+.|.|.. ....+|.|+|.|+++++.|+++|+.++
T Consensus 87 ~~~~~F~I~~---~~~r~~~l~a~s~~e~~~Wi~al~~~~ 123 (129)
T 1x1g_A 87 VQGNLFKVIT---KDDTHYYIQASSKAERAEWIEAIKKLT 123 (129)
T ss_dssp CCSSCEEECC---TTCCCEEECCSSHHHHHHHHHHHHHHS
T ss_pred CCCceEEEEc---CCCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence 356777742 233579999999999999999999885
No 41
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.51 E-value=0.00033 Score=63.23 Aligned_cols=97 Identities=11% Similarity=0.096 Sum_probs=66.6
Q ss_pred ccccccccEEEEeCC-CCeeEEEEEccC--CeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecCCCCCcEEEEEee
Q psy9950 489 GRLLRQNEFIVSQGK-GKKCLRHVFLFE--ELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGDSSTKFEIWFRK 565 (732)
Q Consensus 489 grll~~g~l~v~~~~-~kk~~r~vFLF~--D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~~~~~F~I~~~~ 565 (732)
...+++|.+....+. +.-+.|+++|-. ..|.+-+..... ....+..|+|..+.|.. .+...+.|.|..
T Consensus 6 ~~~~~~G~L~K~~~~~~~Wk~R~fvL~~~~~~L~Yyk~~~~~------~~~~~g~I~L~~~~v~~-~~~~~~~F~i~~-- 76 (120)
T 2d9x_A 6 SGENVYGYLMKYTNLVTGWQYRFFVLNNEAGLLEYFVNEQSR------NQKPRGTLQLAGAVISP-SDEDSHTFTVNA-- 76 (120)
T ss_dssp SCCCCEEEEEEEEETTTEEEEEEEEECTTTCEEEEESSGGGS------SSCCSEEEECTTCCEEC-CSSSSSCEEECC--
T ss_pred CCCcEEEEEEecCCCCCCceEEEEEEECCCCEEEEEecCccc------CCCccceEEcceEEEEe-cCCCCCEEEEEc--
Confidence 345677877765433 244678888874 477776654211 12356788898887654 334567888752
Q ss_pred cCCCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q psy9950 566 RKPNETFTLQSMSEDIKQAWTDELSNLLWK 595 (732)
Q Consensus 566 ~~~~~~~~L~A~S~eeK~~Wi~~I~~~i~~ 595 (732)
....+|.|+|.|+++++.|+++|+.++..
T Consensus 77 -~~~r~~~l~a~s~~e~~~Wi~al~~~~~~ 105 (120)
T 2d9x_A 77 -ASGEQYKLRATDAKERQHWVSRLQICTQH 105 (120)
T ss_dssp -SSSCCEEECCSSHHHHHHHHHHHHHHHHH
T ss_pred -CCCCEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 22479999999999999999999998743
No 42
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.43 E-value=0.00032 Score=64.87 Aligned_cols=98 Identities=11% Similarity=0.146 Sum_probs=66.8
Q ss_pred cccccccccEEEEeCCCCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecCC-CCCcEEEEEeec
Q psy9950 488 QGRLLRQNEFIVSQGKGKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGD-SSTKFEIWFRKR 566 (732)
Q Consensus 488 ~grll~~g~l~v~~~~~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~-~~~~F~I~~~~~ 566 (732)
++..+++|.+......+.-+.|++.|=++.|.+-|..+. ...+..|+|..+.+.+.... ..++|.|.....
T Consensus 5 ~~~v~k~GwL~K~g~~k~WkrRWfVLk~~~L~yyk~~~~--------~~p~G~I~L~~~~v~~~~~~~~~~~F~i~~~~~ 76 (130)
T 1v88_A 5 SSGIVMADWLKIRGTLKSWTKLWCVLKPGVLLIYKTQKN--------GQWVGTVLLNACEIIERPSKKDGFCFKLFHPLE 76 (130)
T ss_dssp SSSCCEEEEEEECCSSSSCEEEEEEEETTEEEEESCSSS--------CCCCEEEECSSCEECCCCTTTSSCEEEEECTTC
T ss_pred CCceEEEeEEEEeCCCCCceEEEEEEECCEEEEECCCCC--------CCceEEEEcCCCEEEECCCCCCCeEEEEEcCCc
Confidence 455677888776432223467888888887777765421 23567888988887654433 347888864211
Q ss_pred CC--------------------CeEEEEEcCCHHHHHHHHHHHHHHH
Q psy9950 567 KP--------------------NETFTLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 567 ~~--------------------~~~~~L~A~S~eeK~~Wi~~I~~~i 593 (732)
.. ...|.|.|.|+++++.|+++|+.++
T Consensus 77 ~~i~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a~ 123 (130)
T 1v88_A 77 QSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELAL 123 (130)
T ss_dssp CCCSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHH
T ss_pred cccccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHHHHHH
Confidence 10 2348999999999999999999986
No 43
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=97.43 E-value=0.00076 Score=60.88 Aligned_cols=97 Identities=10% Similarity=0.168 Sum_probs=67.9
Q ss_pred cccccccEEEEeCC-CCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecC-CCCCcEEEEEeec-
Q psy9950 490 RLLRQNEFIVSQGK-GKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIG-DSSTKFEIWFRKR- 566 (732)
Q Consensus 490 rll~~g~l~v~~~~-~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~-~~~~~F~I~~~~~- 566 (732)
..+++|.+....+. +.-+.|+++|.++.|.+-+.... ...+..|+|.++.+..... +..+.|.|.....
T Consensus 4 ~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~--------~~~~g~i~L~~~~v~~~~~~~~~~~f~i~~~~~~ 75 (127)
T 1fgy_A 4 NPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTTD--------KEPRGIIPLENLSIREVLDPRKPNCFELYNPSHK 75 (127)
T ss_dssp SCSEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTTC--------SSCSEEEECTTCEEEEECCSSCSSEEEEECSSST
T ss_pred CCceEeEEEEECCCCCCeEEEEEEEECCEEEEeCCCCC--------CCcceEEECCceEEEEccCCCCCceEEEecCCcc
Confidence 45677777665433 34568999999999888875321 1245678888887765432 3456788763211
Q ss_pred -----------------CCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q psy9950 567 -----------------KPNETFTLQSMSEDIKQAWTDELSNLLW 594 (732)
Q Consensus 567 -----------------~~~~~~~L~A~S~eeK~~Wi~~I~~~i~ 594 (732)
....+|.|+|.|+++++.|+.+|+.+|.
T Consensus 76 ~~~~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i~ 120 (127)
T 1fgy_A 76 GQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASIS 120 (127)
T ss_dssp TCCCCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ccccccccccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHhc
Confidence 1236899999999999999999999873
No 44
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.40 E-value=0.0011 Score=62.00 Aligned_cols=98 Identities=16% Similarity=0.127 Sum_probs=69.0
Q ss_pred cccccccccEEEEeCC-------CCeeEEEEEccCC-----eEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecC-C
Q psy9950 488 QGRLLRQNEFIVSQGK-------GKKCLRHVFLFEE-----LILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIG-D 554 (732)
Q Consensus 488 ~grll~~g~l~v~~~~-------~kk~~r~vFLF~D-----~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~-~ 554 (732)
.+..+++|.+...... +.-+.|+++|..+ .|++.+.... ....+..|+|..+.+..... .
T Consensus 15 ~~~~~~~G~L~K~~~~~~~~~~~k~Wk~RwfvL~~~~~g~~~L~yy~~~~~-------~~~~~g~I~L~~~~~~~~~~~~ 87 (150)
T 1wg7_A 15 KGGITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKI-------SKEPKGSIFLDSCMGVVQNNKV 87 (150)
T ss_dssp SCCCCCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEEESSSCC-------SSCCSEEECTTTCCEECCCCSS
T ss_pred CCCeeEEEEEEEecCCccccccccCeeEEEEEEecCCCCceEEEEECCCCC-------CCCcCcEEecccCEEEecCCCC
Confidence 4667888988875422 2346788888887 8877765421 12345678888877665332 3
Q ss_pred CCCcEEEEEeecCCCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q psy9950 555 SSTKFEIWFRKRKPNETFTLQSMSEDIKQAWTDELSNLLWK 595 (732)
Q Consensus 555 ~~~~F~I~~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i~~ 595 (732)
..+.|.|.. ....+|.|+|.|++++..|+.+|+.+|..
T Consensus 88 ~~~~F~i~~---~~~r~~~l~A~s~~e~~~Wi~al~~ai~~ 125 (150)
T 1wg7_A 88 RRFAFELKM---QDKSSYLLAADSEVEMEEWITILNKILQL 125 (150)
T ss_dssp CTTEEEEEC---SSSCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEe---CCCcEEEEEeCCHHHHHHHHHHHHHHHHh
Confidence 456777753 22479999999999999999999999854
No 45
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=97.39 E-value=0.00082 Score=60.90 Aligned_cols=95 Identities=14% Similarity=0.052 Sum_probs=69.1
Q ss_pred ccccccccEEEEeCC-CCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecC--CCCCcEEEEEee
Q psy9950 489 GRLLRQNEFIVSQGK-GKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIG--DSSTKFEIWFRK 565 (732)
Q Consensus 489 grll~~g~l~v~~~~-~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~--~~~~~F~I~~~~ 565 (732)
...+++|.+....+. +.-+.|+++|.++.|.+.+.... ...+..|+|.++.+..... +..+.|.|..
T Consensus 16 ~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~--------~~~~g~i~L~~~~~v~~~~~~~~~~~F~i~~-- 85 (126)
T 1fao_A 16 SLGTKEGYLTKQGGLVKTWKTRWFTLHRNELKYFKDQMS--------PEPIRILDLTECSAVQFDYSQERVNCFCLVF-- 85 (126)
T ss_dssp CTTCEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTTC--------SSCSEEEEGGGCCEEEEECSSSSSSEEEEEE--
T ss_pred CCccEEEEEEEcCCCCCCcccEEEEEECCEEEEeCCCCC--------CCceeEEEccceEEEEecccCCCCCEEEEEe--
Confidence 455778877765432 34578999999999988875421 2345678888887554433 3346788753
Q ss_pred cCCCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q psy9950 566 RKPNETFTLQSMSEDIKQAWTDELSNLLWK 595 (732)
Q Consensus 566 ~~~~~~~~L~A~S~eeK~~Wi~~I~~~i~~ 595 (732)
+..+|.|+|.|+++++.|+.+|+.+|..
T Consensus 86 --~~r~~~l~a~s~~e~~~Wi~al~~~i~~ 113 (126)
T 1fao_A 86 --PFRTFYLCAKTGVEADEWIKILRWKLSQ 113 (126)
T ss_dssp --TTEEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred --CCcEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 5689999999999999999999999854
No 46
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=97.37 E-value=0.00035 Score=60.10 Aligned_cols=89 Identities=19% Similarity=0.194 Sum_probs=61.6
Q ss_pred ccccEEEEeCC-CCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecCCCCCcEEEEEeecCCCeE
Q psy9950 493 RQNEFIVSQGK-GKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGDSSTKFEIWFRKRKPNET 571 (732)
Q Consensus 493 ~~g~l~v~~~~-~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~~~~~F~I~~~~~~~~~~ 571 (732)
+.|.+..+.+. ..-+.|+++|-++.|.+.+.... .....+..|.+..+.+... ..+.+.|.|. .+..+
T Consensus 3 k~G~L~K~g~~~k~WkkR~FvL~~~~L~Yy~~~~~------~~~~~~~~i~l~~~~~~~~-~~~~~~F~i~----~~~r~ 71 (94)
T 2rsg_A 3 RCGVLSKWTNYIHGWQDRWVVLKNNALSYYKSEDE------TEYGCRGSICLSKAVITPH-DFDECRFDIS----VNDSV 71 (94)
T ss_dssp EEEEEEEESSSTTCEEEEEEEEETTEEEEESSTTG------GGTCCSEEEETTTCEEEEC-SSCSSEEEEE----ETTEE
T ss_pred EEEEEEEeCCCCCCceEEEEEEECCEEEEEEeccc------ccccceeeEecceeeeecC-cccceeEEEE----eCCeE
Confidence 45655544322 23467999999999988865421 1112345677887776654 3455778875 35689
Q ss_pred EEEEcCCHHHHHHHHHHHHHH
Q psy9950 572 FTLQSMSEDIKQAWTDELSNL 592 (732)
Q Consensus 572 ~~L~A~S~eeK~~Wi~~I~~~ 592 (732)
|.|+|.|+++++.|+++|+++
T Consensus 72 ~~l~A~s~~e~~~Wi~aLq~A 92 (94)
T 2rsg_A 72 WYLRAQDPDHRQQWIDAIEQH 92 (94)
T ss_dssp EEEECCSSCCTHHHHHHHHHH
T ss_pred EEEECCCHHHHHHHHHHHHhh
Confidence 999999999999999999875
No 47
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=97.36 E-value=0.00093 Score=60.55 Aligned_cols=94 Identities=9% Similarity=0.081 Sum_probs=67.2
Q ss_pred ccccccccEEEEeCC--CCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecC----CCCCcEEEE
Q psy9950 489 GRLLRQNEFIVSQGK--GKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIG----DSSTKFEIW 562 (732)
Q Consensus 489 grll~~g~l~v~~~~--~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~----~~~~~F~I~ 562 (732)
..++++|.+....+. +.-+.|+++|-++.|.+.+... ....+..|+|..+.+..... ...+.|.|.
T Consensus 19 ~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~--------~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~ 90 (128)
T 2dkp_A 19 APVVRRGWLYKQDSTGMKLWKKRWFVLSDLCLFYYRDEK--------EEGILGSILLPSFQIALLTSEDHINRKYAFKAA 90 (128)
T ss_dssp SCCCEEEEEEEECCSSSCCEEEEEEEEETTEEEEESSTT--------CCSEEEEECGGGSEEEECCGGGCCSSCSEEEEE
T ss_pred CCcEEEEEEEEeCCCCCCCceeEEEEEeCCEEEEECCCC--------CcccceEEEcCceEEEEcCCcccCCCCeEEEEE
Confidence 456788888765442 3456899999999888887542 12346788888887765432 234567764
Q ss_pred EeecCCCeEEEEEcCCHHHHHHHHHHHHHHH
Q psy9950 563 FRKRKPNETFTLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 563 ~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i 593 (732)
. ....+|.|+|.|+++++.|+++|+.++
T Consensus 91 ~---~~~r~~~l~a~s~~e~~~Wi~al~~a~ 118 (128)
T 2dkp_A 91 H---PNMRTYYFCTDTGKEMELWMKAMLDAA 118 (128)
T ss_dssp C---SSSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred c---CCCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence 2 234789999999999999999998875
No 48
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.35 E-value=0.00073 Score=60.95 Aligned_cols=95 Identities=18% Similarity=0.187 Sum_probs=67.2
Q ss_pred ccccccccEEEEeCC---CCeeEEEEEccCC--eEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecCCCCCcEEEEE
Q psy9950 489 GRLLRQNEFIVSQGK---GKKCLRHVFLFEE--LILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGDSSTKFEIWF 563 (732)
Q Consensus 489 grll~~g~l~v~~~~---~kk~~r~vFLF~D--~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~~~~~F~I~~ 563 (732)
...+++|.+....++ +.-+.|+++|-++ .|.+-+.... ...+..|+|.++.+........+.|.|.
T Consensus 6 ~~~~~~G~L~K~g~~~~~k~WkkRwfvL~~~~~~L~Yy~~~~~--------~~~~g~I~L~~~~~~~~~~~~~~~F~i~- 76 (119)
T 2dhk_A 6 SGKKLCGYLSKFGGKGPIRGWKSRWFFYDERKCQLYYSRTAQD--------ANPLDSIDLSSAVFDCKADAEEGIFEIK- 76 (119)
T ss_dssp SCCCCEEEEEECSCSSSSCCCEEEEEEEETTTTEEEEESSTTC--------CSCSEEEEGGGCEEEECTTGGGCEEEEE-
T ss_pred CCCcEEEEEEecCCCCCCCCceeEEEEEECCccEEEEECCCCC--------cccccEEECCCCEEEecCCCCCCEEEEE-
Confidence 345667777655431 2336788888888 7777765421 1356788999888776444445677764
Q ss_pred eecCCCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q psy9950 564 RKRKPNETFTLQSMSEDIKQAWTDELSNLLWK 595 (732)
Q Consensus 564 ~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i~~ 595 (732)
.+..+|.|+|.|+++++.|+.+|+.++.+
T Consensus 77 ---~~~r~~~l~a~s~~e~~~Wi~al~~~~~~ 105 (119)
T 2dhk_A 77 ---TPSRVITLKAATKQAMLYWLQQLQMKRWE 105 (119)
T ss_dssp ---CSSCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred ---eCCcEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 44789999999999999999999998733
No 49
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.34 E-value=0.00047 Score=61.43 Aligned_cols=93 Identities=12% Similarity=0.110 Sum_probs=65.8
Q ss_pred ccccccccEEEEeCC-CCeeEEEEEcc--CCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecC---------CCC
Q psy9950 489 GRLLRQNEFIVSQGK-GKKCLRHVFLF--EELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIG---------DSS 556 (732)
Q Consensus 489 grll~~g~l~v~~~~-~kk~~r~vFLF--~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~---------~~~ 556 (732)
+..+++|.+....+. +.-+.|+++|. ++.|.+-+.... ...+..|+|.++.+..... ...
T Consensus 6 ~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yy~~~~~--------~~~~g~i~L~~~~~v~~~~~~~~~~~~~~~~ 77 (117)
T 1v5u_A 6 SGRSYEGILYKKGAFMKPWKARWFVLDKTKHQLRYYDHRMD--------TECKGVIDLAEVEAVAPGTPTIGAPKTVDEK 77 (117)
T ss_dssp CSSSEEEEEEECCCSSSCCEEEEEEEETTTTEEEEESSSSC--------SSCCCEEEGGGEEEEECCCCCTTSCSSSCTT
T ss_pred CCccEEEEEEecCCCCCCceeeEEEEECCCCEEEEeecCCC--------CccceEEEccCcEEEeecCccccccccCCCC
Confidence 455677777665433 34568899999 778888775421 1256778888887665322 223
Q ss_pred CcEEEEEeecCCCeEEEEEcCCHHHHHHHHHHHHHHH
Q psy9950 557 TKFEIWFRKRKPNETFTLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 557 ~~F~I~~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i 593 (732)
+.|.|. .+..+|.|+|.|+++++.|+++|+.+|
T Consensus 78 ~~F~i~----~~~r~~~l~a~s~~e~~~Wi~al~~~i 110 (117)
T 1v5u_A 78 AFFDVK----TTRRVYNFCAQDVPSAQQWVDRIQSCL 110 (117)
T ss_dssp TCEEEE----ESSCEEEEECSSHHHHHHHHHHHHTTC
T ss_pred eEEEEE----CCCceEEEECCCHHHHHHHHHHHHHHh
Confidence 678873 356799999999999999999998875
No 50
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=97.34 E-value=0.00041 Score=63.40 Aligned_cols=105 Identities=10% Similarity=0.114 Sum_probs=67.9
Q ss_pred cccccccEEEEeCC-CCeeEEEEEccCCeEEEEEeeeCCCCCCCc-ceEEeeeeeecceEEEEecCC---CCCcEEEEEe
Q psy9950 490 RLLRQNEFIVSQGK-GKKCLRHVFLFEELILFSKARRFPDRKNLD-LYIYKHSMKMSDIGITAQIGD---SSTKFEIWFR 564 (732)
Q Consensus 490 rll~~g~l~v~~~~-~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~-~y~~K~~i~l~~i~v~e~~~~---~~~~F~I~~~ 564 (732)
..+++|.+..+.+. +.-+.|+++|-++.|.+-+........... .-..+..|+|..+.+.....+ ..+.|.|...
T Consensus 11 ~~~k~G~L~K~g~~~k~Wk~RwfVL~~~~L~yyk~~~~~~~e~~plg~~~~G~I~L~~~~v~~~~~~~~~k~~~F~I~~~ 90 (124)
T 2w2x_D 11 EHKQQGELYMWDSIDQKWTRHFCAIADAKLSFSDDIEQTMEEDNPLGSLCRGILDLNTYNVVKAPQGKNQKSFVFILEPK 90 (124)
T ss_dssp --CCEEEEEEEETTTTEEEEEEEEEETTEEEEEEEHHHHHHCSSCCCCSCSEEEEGGGEEEEECTTCBTTBSEEEEEEEC
T ss_pred hcceeEEEEEECCCCCCceEeEEEEECCEEEEEcccccccccccccCCccccEEECCCCEEEEccCCcCCCCEEEEEECC
Confidence 45678888766543 345688999999998888764210000000 122467899999987765432 2346776542
Q ss_pred ecCCCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q psy9950 565 KRKPNETFTLQSMSEDIKQAWTDELSNLLWK 595 (732)
Q Consensus 565 ~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i~~ 595 (732)
. .....|.|.|.|.+++..|+++|+++++.
T Consensus 91 ~-~~~~~~~~~A~s~ee~~~Wi~ai~~a~~~ 120 (124)
T 2w2x_D 91 Q-QGDPPVEFATDKVEELFEWFQSIREITWK 120 (124)
T ss_dssp C---CCCEEEEECCCHHHHHHHHHHHHHHC-
T ss_pred C-CCCceEEEEECCHHHHHHHHHHHHHHHHh
Confidence 1 12467999999999999999999998754
No 51
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.30 E-value=0.00063 Score=60.56 Aligned_cols=94 Identities=11% Similarity=0.149 Sum_probs=67.1
Q ss_pred ccccccccEEEEeCC--CCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecC----CCCCcEEEE
Q psy9950 489 GRLLRQNEFIVSQGK--GKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIG----DSSTKFEIW 562 (732)
Q Consensus 489 grll~~g~l~v~~~~--~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~----~~~~~F~I~ 562 (732)
..++++|.+....+. +.-+.|+++|.++.|.+-+..+. ...+..|+|.++.+..... ...+.|.|.
T Consensus 9 ~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~--------~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~ 80 (117)
T 2d9y_A 9 APVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEKE--------ESILGSIPLLSFRVAAVQPSDNISRKHTFKAE 80 (117)
T ss_dssp CCCCEEEEEEEECTTSSSCEEEEEEEEETTEEEEESSTTC--------CSCCEEEECSSCEEEECCTTTTCCCSSEEEEE
T ss_pred CCeeEEEEEEEeCCCCCCCceEEEEEECCCEEEEECCCCC--------CCcCCEEEeCCeEEEEcCccccCCCccEEEEE
Confidence 456778888766432 34568999999998888875421 1246678888887654422 123467764
Q ss_pred EeecCCCeEEEEEcCCHHHHHHHHHHHHHHH
Q psy9950 563 FRKRKPNETFTLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 563 ~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i 593 (732)
.....+|.|+|.|+++++.|+++|+.++
T Consensus 81 ---~~~~r~~~l~a~s~~e~~~Wi~al~~~~ 108 (117)
T 2d9y_A 81 ---HAGVRTYFFSAESPEEQEAWIQAMGEAA 108 (117)
T ss_dssp ---CSSSCEEEEECSSHHHHHHHHHHHHHTT
T ss_pred ---cCCCcEEEEEcCCHHHHHHHHHHHHHHH
Confidence 2445799999999999999999999875
No 52
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.27 E-value=0.0015 Score=57.66 Aligned_cols=94 Identities=12% Similarity=0.071 Sum_probs=66.8
Q ss_pred ccccccccEEEEeCC-CCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecCCC--CCcEEEEEee
Q psy9950 489 GRLLRQNEFIVSQGK-GKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGDS--STKFEIWFRK 565 (732)
Q Consensus 489 grll~~g~l~v~~~~-~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~~--~~~F~I~~~~ 565 (732)
...+++|.+....+. +.-+.|++.|-+..|.+-|.... ...+..|+|..+.+....... ++.|.|..
T Consensus 6 ~~~~~~G~L~K~~~~~~~Wk~RwfvL~~~~L~yyk~~~~--------~~~~~~i~L~~~~~~~~~~~~~~~~~F~i~~-- 75 (109)
T 1wgq_A 6 SGSTMSGYLYRSKGSKKPWKHLWFVIKNKVLYTYAASED--------VAALESQPLLGFTVTLVKDENSESKVFQLLH-- 75 (109)
T ss_dssp CSCSCEEEEEEESSTTSCCEEEEEEEETTEEEEESCTTC--------SSCSEEEECSSEEEEECCCSSCSSSEEEEEE--
T ss_pred CCCeEEEEEEeCCCCCCCceeEEEEEeCCEEEEECCCCc--------CccCceEECCCCEEEECCCCCCCCcEEEEEe--
Confidence 455678887765332 34467888888888887765421 123567889888877655432 36787753
Q ss_pred cCCCeEEEEEcCCHHHHHHHHHHHHHHH
Q psy9950 566 RKPNETFTLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 566 ~~~~~~~~L~A~S~eeK~~Wi~~I~~~i 593 (732)
....+|.|+|.|+++++.|+++|+.++
T Consensus 76 -~~~~~~~~~a~s~~e~~~Wi~al~~a~ 102 (109)
T 1wgq_A 76 -KGMVFYVFKADDAHSTQRWIDAFQEGT 102 (109)
T ss_dssp -TTEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred -CCCeEEEEECCCHHHHHHHHHHHHHHh
Confidence 334689999999999999999999875
No 53
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.25 E-value=0.001 Score=63.00 Aligned_cols=91 Identities=13% Similarity=0.240 Sum_probs=63.7
Q ss_pred ccccccEEEEeCC-CCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEe--cC-CCCCcEEEEEeec
Q psy9950 491 LLRQNEFIVSQGK-GKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQ--IG-DSSTKFEIWFRKR 566 (732)
Q Consensus 491 ll~~g~l~v~~~~-~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~--~~-~~~~~F~I~~~~~ 566 (732)
.+++|.+....+. +.-+.|++.|-.+.|.+-|..+. ...+..|+|.++.+... .. ...+.|.|.
T Consensus 18 v~keG~L~Kkg~~~k~WkrRWFvLk~~~L~Yyk~~~d--------~~~~g~I~L~~~~~~~~~~~~~~~~~~F~I~---- 85 (149)
T 1x1f_A 18 LYFEGFLLIKRSGYREYEHYWTELRGTTLFFYTDKKS--------IIYVDKLDIVDLTCLTEQNSTEKNCAKFTLV---- 85 (149)
T ss_dssp EEEEEEEEEECTTCCSCEEEEEEEETTEEEEESCSSC--------SSCSEECCCSSCCEEEECCCTTSCCCEEEEE----
T ss_pred ccEEEEEEEeCCCCCCceeEEEEEcCCEEEEEeCCCc--------cccCcEEECCCceEEeeccCCCCcCcEEEEE----
Confidence 5667777654333 24467898898998888876531 12346788888766522 21 224567764
Q ss_pred CCCeEEEEEcCCHHHHHHHHHHHHHHH
Q psy9950 567 KPNETFTLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 567 ~~~~~~~L~A~S~eeK~~Wi~~I~~~i 593 (732)
.+..+|.|+|.|.++++.|+++|+.++
T Consensus 86 t~~r~~~f~A~s~ee~~eWi~aI~~v~ 112 (149)
T 1x1f_A 86 LPKEEVQLKTENTESGEEWRGFILTVT 112 (149)
T ss_dssp CSSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence 456799999999999999999998875
No 54
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=97.23 E-value=0.00085 Score=60.37 Aligned_cols=93 Identities=12% Similarity=0.035 Sum_probs=65.7
Q ss_pred cccccccEEEEeCC--CCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecCC----CCCcEEEEE
Q psy9950 490 RLLRQNEFIVSQGK--GKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGD----SSTKFEIWF 563 (732)
Q Consensus 490 rll~~g~l~v~~~~--~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~----~~~~F~I~~ 563 (732)
.++++|.+....+. +.-+.|+++|-++.|.+-+.... ...+..|+|..+.|...... ..+.|.|.
T Consensus 10 ~~~~~G~L~K~~~~~~~~WkkR~fvL~~~~L~yy~~~~~--------~~~~g~i~l~~~~v~~~~~~~~~~~~~~f~i~- 80 (123)
T 1upq_A 10 PVHIRGWLHKQDSSGLRLWKRRWFVLSGHCLFYYKDSRE--------ESVLGSVLLPSYNIRPDGPGAPRGRRFTFTAE- 80 (123)
T ss_dssp CEEEEEEEEEECSSSSCCEEEEEEEEETTEEEEESSTTC--------CSCCEEEEGGGCEEEECCSSCTTSSSSEEEEE-
T ss_pred CceEEEEEEeeCCCCCCCceeEEEEEeCCEEEEECCCCC--------cccceEEECCCCEEEECCCCccCCCcEEEEEE-
Confidence 46678888776532 34468899999998888865421 22466788888887765322 23445553
Q ss_pred eecCCCeEEEEEcCCHHHHHHHHHHHHHHH
Q psy9950 564 RKRKPNETFTLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 564 ~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i 593 (732)
.....+|.|+|.|+++++.|+.+|+.++
T Consensus 81 --~~~~r~~~l~a~s~~e~~~Wi~al~~a~ 108 (123)
T 1upq_A 81 --HPGMRTYVLAADTLEDLRGWLRALGRAS 108 (123)
T ss_dssp --CTTSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred --CCCCeEEEEECCCHHHHHHHHHHHHHHH
Confidence 2334799999999999999999999986
No 55
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=97.22 E-value=0.001 Score=62.28 Aligned_cols=95 Identities=12% Similarity=0.150 Sum_probs=68.5
Q ss_pred cccccccccEEEEeCC-C----CeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecC---CC--CC
Q psy9950 488 QGRLLRQNEFIVSQGK-G----KKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIG---DS--ST 557 (732)
Q Consensus 488 ~grll~~g~l~v~~~~-~----kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~---~~--~~ 557 (732)
.+..+++|.+....+. + .-+.|+++|-++.|.+.+... ....+..|+|..+.+..... +. .+
T Consensus 14 ~~~~~~~G~L~K~g~~~~~~~k~WkkR~fvL~~~~L~yyk~~~--------~~~~~g~i~L~~~~v~~~~~~~~~~~~~~ 85 (148)
T 1u5f_A 14 LPFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDK--------DKQQKGEFAIDGYDVRMNNTLRKDGKKDC 85 (148)
T ss_dssp CSSEEEEEEEEEECCCSSCSSCSEEEEEEEEETTEEEEESSTT--------CSSCSEEEECTTCEEEECTTSCSSTTGGG
T ss_pred CCCccEEEEEEEeCCCCCCcCCCceeEEEEEECCEEEEEcCCC--------CcccceEEEcCCcEEEECCCcccCCCCcc
Confidence 3567888888876543 1 446899999999888886542 12356778898888775432 22 35
Q ss_pred cEEEEEeecCCCeEEEEEcCCHHHHHHHHHHHHHHH
Q psy9950 558 KFEIWFRKRKPNETFTLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 558 ~F~I~~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i 593 (732)
.|.|.. ....+|.|+|.|.++++.|+.+|+.++
T Consensus 86 ~F~I~~---~~~r~~~l~a~s~~e~~~Wi~al~~~i 118 (148)
T 1u5f_A 86 CFEICA---PDKRIYQFTAASPKDAEEWVQQLKFIL 118 (148)
T ss_dssp EEEEEC---TTSCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred EEEEEC---CCCcEEEEECCCHHHHHHHHHHHHHHH
Confidence 677652 234799999999999999999999986
No 56
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=97.18 E-value=0.001 Score=67.32 Aligned_cols=96 Identities=15% Similarity=0.148 Sum_probs=72.6
Q ss_pred ccccccccccEEEEeCC------CCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecCCCCCcEE
Q psy9950 487 EQGRLLRQNEFIVSQGK------GKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGDSSTKFE 560 (732)
Q Consensus 487 ~~grll~~g~l~v~~~~------~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~~~~~F~ 560 (732)
..+..+++|.+....+. +.-+.|+++|.++.|.+.+... . ...+..|+|..+.+.....+..+.|.
T Consensus 54 ~~~~~~k~G~L~K~g~~~~~~~~k~WkkRwfvL~~~~L~Yyk~~~-----~---~~~~g~I~L~~~~~v~~~~~k~~~F~ 125 (228)
T 3tfm_A 54 SKQEALKQGWLHNNGGGSSTLSRRNWKKRWFVLRQSKLMYFENDS-----E---EKLKGTVEVRSAKEIIDNTNKENGID 125 (228)
T ss_dssp SCCCSSEEEEEEECGGGCSSSCGGGCEEEEEEECSSEEEEESSTT-----C---CSEEEEEEGGGCSEEEEETTTTSEEE
T ss_pred cCCCcceEEEEEEECCCcCCcccCCceEEEEEEeCCEEEEEeCCC-----C---cceeEEEEcCCCEEeccCCCCCcEEE
Confidence 34566778877765432 2336789999999998887542 1 24578899999887665556667888
Q ss_pred EEEeecCCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q psy9950 561 IWFRKRKPNETFTLQSMSEDIKQAWTDELSNLLW 594 (732)
Q Consensus 561 I~~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i~ 594 (732)
|. .+..+|.|+|.|+++++.|+++|++++.
T Consensus 126 I~----t~~r~~~l~A~s~~e~~~Wv~aL~~~i~ 155 (228)
T 3tfm_A 126 II----MADRTFHLIAESPEDASQWFSVLSQVHS 155 (228)
T ss_dssp EE----CSSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred EE----cCCcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 84 3568999999999999999999999874
No 57
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.18 E-value=0.00094 Score=59.96 Aligned_cols=94 Identities=11% Similarity=0.149 Sum_probs=66.5
Q ss_pred ccccccccEEEEeCC--CCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecC----CCCCcEEEE
Q psy9950 489 GRLLRQNEFIVSQGK--GKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIG----DSSTKFEIW 562 (732)
Q Consensus 489 grll~~g~l~v~~~~--~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~----~~~~~F~I~ 562 (732)
..++++|.+....+. +.-+.|+++|-++.|.+.+.... ...+..|+|.++.+..... +..+.|.|.
T Consensus 20 ~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~--------~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~ 91 (122)
T 2yry_A 20 APVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEKE--------ESILGSIPLLSFRVAAVQPSDNISRKHTFKAE 91 (122)
T ss_dssp CCEEEEEEEEEECCSSSCCEEEEEEEEETTEEEEESSTTC--------CSCCEEEESTTCCCEECCTTCSCSSSSEEEEE
T ss_pred CCccEEEEEEEECCCCCCCcEEEEEEEeCCEEEEECCCCC--------CCcccEEEcCCCEEEEcCccccCCcccEEEEe
Confidence 456788888776432 34568999999988888865421 1246678888877654322 124567763
Q ss_pred EeecCCCeEEEEEcCCHHHHHHHHHHHHHHH
Q psy9950 563 FRKRKPNETFTLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 563 ~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i 593 (732)
.....+|.|+|.|+++++.|+++|+.++
T Consensus 92 ---~~~~r~~~l~a~s~~e~~~Wi~al~~a~ 119 (122)
T 2yry_A 92 ---HAGVRTYFFSAESPEEQEAWIQAMGEAA 119 (122)
T ss_dssp ---CSSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred ---cCCCcEEEEEcCCHHHHHHHHHHHHHHH
Confidence 2345799999999999999999999886
No 58
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=97.17 E-value=0.05 Score=59.61 Aligned_cols=94 Identities=12% Similarity=0.088 Sum_probs=61.4
Q ss_pred ccccccccEEEEeCCC----CeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecC-CCCCcEEEEE
Q psy9950 489 GRLLRQNEFIVSQGKG----KKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIG-DSSTKFEIWF 563 (732)
Q Consensus 489 grll~~g~l~v~~~~~----kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~-~~~~~F~I~~ 563 (732)
....++|.+.+....| ..+.|+++|=+..|.+.+.... .. ...|.|..+.|..... +-.++|.|..
T Consensus 299 ~~~~k~G~L~k~~~~g~~~~~W~rrwfvl~~~~l~y~~~~~~---~~------~~~~~l~~~~v~~~~~~~r~~cF~i~~ 369 (407)
T 4h8s_A 299 NLIQKAGYLNLRNKTGLVTTTWERLYFFTQGGNLMCQPRGAV---AG------GLIQDLDNCSVMAVDCEDRRYCFQITT 369 (407)
T ss_dssp SCSCCEEEEEEEEECSSSCEEEEEEEEEECSSCEECCCTTCS---SC------CCCBCSSCCEEEEECCTTCSSEEEEEC
T ss_pred CcceeeceeeeeccCCCCCCCceEEEEEEECCEEEEEeCCCC---CC------CeEEECCceEEEECCCCCCCceEEEEe
Confidence 3456789888764332 2356888888887776653321 11 1245566666654332 3356788753
Q ss_pred eecCCCeEEEEEcCCHHHHHHHHHHHHHHH
Q psy9950 564 RKRKPNETFTLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 564 ~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i 593 (732)
.....+|+|+|.|+++++.|+++|+.++
T Consensus 370 --~~~~~~~~l~A~s~~e~~~Wi~ai~~a~ 397 (407)
T 4h8s_A 370 --PNGKSGIILQAESRKENEEWICAINNIS 397 (407)
T ss_dssp --TTSSCCEEEECSSSHHHHHHHHHHHHHH
T ss_pred --cCCCceEEEEcCCHHHHHHHHHHHHHHH
Confidence 2233689999999999999999999986
No 59
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.16 E-value=0.0022 Score=56.49 Aligned_cols=94 Identities=15% Similarity=0.109 Sum_probs=63.5
Q ss_pred ccccccccEEEEeCCCCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEec-CCCCCcEEEEEeecC
Q psy9950 489 GRLLRQNEFIVSQGKGKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQI-GDSSTKFEIWFRKRK 567 (732)
Q Consensus 489 grll~~g~l~v~~~~~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~-~~~~~~F~I~~~~~~ 567 (732)
...+++|.+... ..+.-+.|+++|-++.|.+-+.... ...-...|.+..+.|.... ....+.|.|.. .
T Consensus 6 ~~~~~~G~L~K~-~~k~Wk~RwfvL~~~~L~yyk~~~~-------~~~~~~~i~l~~~~v~~~~~~~~~~~F~i~~---~ 74 (107)
T 2cof_A 6 SGLETSSYLNVL-VNSQWKSRWCSVRDNHLHFYQDRNR-------SKVAQQPLSLVGCEVVPDPSPDHLYSFRILH---K 74 (107)
T ss_dssp CCCTTCCEEEEE-ETTEEEEEEEEECSSCEEEECSSTT-------CSEEEEEECTTTCEEECCCBTTBSCEEEEEE---T
T ss_pred CCCcEeEEEEEe-cCCCcceEEEEEECCEEEEEeCCcc-------cCCCeeEEeccceEEEECCCCCCCeEEEEEe---C
Confidence 456788888877 3335578899999998888775421 1122334555555444322 22346787754 2
Q ss_pred CCeEEEEEcCCHHHHHHHHHHHHHHH
Q psy9950 568 PNETFTLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 568 ~~~~~~L~A~S~eeK~~Wi~~I~~~i 593 (732)
+..+|.|+|.|+++++.|+++|+.++
T Consensus 75 ~~r~~~l~A~s~~e~~~Wi~al~~~~ 100 (107)
T 2cof_A 75 GEELAKLEAKSSEEMGHWLGLLLSES 100 (107)
T ss_dssp TEEEEEEECSSHHHHHHHHHHHHHHS
T ss_pred CCeEEEEEcCCHHHHHHHHHHHHHHH
Confidence 36789999999999999999998864
No 60
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=97.14 E-value=0.0012 Score=60.29 Aligned_cols=102 Identities=11% Similarity=0.084 Sum_probs=58.9
Q ss_pred ccccccEEEEeCC---CCeeEEEEEccCCeEEEEEeeeCC---CCCCC----cceE---EeeeeeecceEEEEe------
Q psy9950 491 LLRQNEFIVSQGK---GKKCLRHVFLFEELILFSKARRFP---DRKNL----DLYI---YKHSMKMSDIGITAQ------ 551 (732)
Q Consensus 491 ll~~g~l~v~~~~---~kk~~r~vFLF~D~LL~~K~kk~~---~~~~~----~~y~---~K~~i~l~~i~v~e~------ 551 (732)
.+++|.+..+.++ +.-+.|+++|-+|-+|+-+..... ...+. .... -...|++....+...
T Consensus 4 ~~k~G~L~K~~g~~~~k~WkkRwFvL~~~~~l~Y~~~~~d~~~~~~~~~i~l~~~~~~~~~~~i~l~~~~~~~~~~~~~~ 83 (128)
T 2rlo_A 4 PIKQSFLLKRSGNSLNKEWKKKYVTLSSNGFLLYHPSINDYIHSTHGKEMDLLRTTVKVPGKRPPRAISAFGPSASGSAG 83 (128)
T ss_dssp EEEEEEEEEECSCSTTCCEEEEEEEEETTTEEEEESSHHHHHHTCSCEEEESSSCEEECSSCCCCCSSCCCSCCSCCCCS
T ss_pred ceeEEEEEEecCCCccCCccEEEEEEeCCCEEEEecchhhhccccCCCeeeeeeeEEecCCCcccccccccccccccccc
Confidence 4678888776442 345678988987666655532100 00000 0001 112344443332211
Q ss_pred -cCCCCCcEEEEEeecCCCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q psy9950 552 -IGDSSTKFEIWFRKRKPNETFTLQSMSEDIKQAWTDELSNLLWK 595 (732)
Q Consensus 552 -~~~~~~~F~I~~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i~~ 595 (732)
.++..++|.|. .....+|.|+|.|+++++.|+++|+.+|..
T Consensus 84 ~~~~~~~~F~I~---t~~~r~~~l~A~s~~e~~~Wi~ai~~~i~~ 125 (128)
T 2rlo_A 84 QAEEENFEFLIV---SSTGQTWHFEAASFEERDAWVQAIESQILA 125 (128)
T ss_dssp SCCCCCCCEEEE---CTTSCEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred ccccCCceEEEE---cCCCCEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 12345678875 223479999999999999999999999843
No 61
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=97.13 E-value=0.029 Score=60.98 Aligned_cols=94 Identities=14% Similarity=0.081 Sum_probs=63.8
Q ss_pred ccccccccEEEEeCCC----CeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecC-CCCCcEEEEE
Q psy9950 489 GRLLRQNEFIVSQGKG----KKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIG-DSSTKFEIWF 563 (732)
Q Consensus 489 grll~~g~l~v~~~~~----kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~-~~~~~F~I~~ 563 (732)
+..+++|.+..+.+.+ ..+.|+++|=++.|.+-|.. . .. -...|.|..+.+..... +..++|.|..
T Consensus 276 ~~~~k~G~L~K~~~~~~~~~~WkkRwfvL~~~~L~y~k~~---~--~~----~~~~i~l~~~~v~~~~~~~r~~~F~i~t 346 (385)
T 2q13_A 276 NLTRKAGYLNARNKTGLVSSTWDRQFYFTQGGNLMSQARG---D--VA----GGLAMDIDNCSVMAVDCEDRRYCFQITS 346 (385)
T ss_dssp CCSCCEEEEEEC--------CCEEEEEEEETTEEEEECSS---C--SS----CEEEEECTTCEEEEECCTTCSSEEEEEC
T ss_pred CCccEEEEEEEecCCCCCcCCceeEEEEEECCEEEEecCC---C--cC----CCceEEccceEEEeccccCCCceEEEEe
Confidence 3567889888764432 25678999988888766652 1 11 13567887777665432 3346788752
Q ss_pred eecCCCeEEEEEcCCHHHHHHHHHHHHHHH
Q psy9950 564 RKRKPNETFTLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 564 ~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i 593 (732)
. .+..+|+|+|.|+++++.|+++|+.++
T Consensus 347 ~--~~~~~~~l~A~s~~e~~~Wi~ai~~~~ 374 (385)
T 2q13_A 347 F--DGKKSSILQAESKKDHEEWICTINNIS 374 (385)
T ss_dssp T--TSCBCCCEECSSHHHHHHHHHHHHHHH
T ss_pred C--CCCeEEEEEeCCHHHHHHHHHHHHHHH
Confidence 1 122799999999999999999999986
No 62
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.10 E-value=0.0028 Score=56.56 Aligned_cols=91 Identities=13% Similarity=0.157 Sum_probs=61.8
Q ss_pred ccccccccEEEEeCC--CCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecCCCCCcEEEEEeec
Q psy9950 489 GRLLRQNEFIVSQGK--GKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGDSSTKFEIWFRKR 566 (732)
Q Consensus 489 grll~~g~l~v~~~~--~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~~~~~F~I~~~~~ 566 (732)
...+++|.+....+. +.-+.|+++|-++.|.+.+.... .. ...|.+..+.+. ...+..+.|.|.
T Consensus 8 ~~~~~~G~L~K~~~~~~k~WkkR~fvL~~~~L~yyk~~~~---~~------~~~i~l~~~~v~-~~~~~~~~F~I~---- 73 (114)
T 2da0_A 8 YGSEKKGYLLKKSDGIRKVWQRRKCSVKNGILTISHATSN---RQ------PAKLNLLTCQVK-PNAEDKKSFDLI---- 73 (114)
T ss_dssp CCSCEEEEEEEECSSSCCCEEEEEEEEETTEEEECCSSCC---SC------CEEEETTTSEEE-ECSSSSSCEEEE----
T ss_pred CCccEEEEEEEeCCCCCCCceeEEEEEeCCEEEEEcCCCC---CC------CCEEEeeeeEEE-ECCCCCCEEEEE----
Confidence 346778887776542 24468899998888888765321 11 122333344444 334456788886
Q ss_pred CCCeEEEEEcCCHHHHHHHHHHHHHHH
Q psy9950 567 KPNETFTLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 567 ~~~~~~~L~A~S~eeK~~Wi~~I~~~i 593 (732)
.+..+|.|+|.|+++++.|+++|+.++
T Consensus 74 ~~~r~~~l~a~s~~e~~~Wi~al~~~~ 100 (114)
T 2da0_A 74 SHNRTYHFQAEDEQDYVAWISVLTNSK 100 (114)
T ss_dssp ETTEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred cCCcEEEEEcCCHHHHHHHHHHHHHHH
Confidence 357899999999999999999999986
No 63
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=96.91 E-value=0.0055 Score=56.21 Aligned_cols=103 Identities=16% Similarity=0.146 Sum_probs=64.6
Q ss_pred cccccccEEEE----eCC---CCeeEEEEEccCCeEEEEEeeeCCCCC---CCcceEEeeeeeecceEEEEecCCC--CC
Q psy9950 490 RLLRQNEFIVS----QGK---GKKCLRHVFLFEELILFSKARRFPDRK---NLDLYIYKHSMKMSDIGITAQIGDS--ST 557 (732)
Q Consensus 490 rll~~g~l~v~----~~~---~kk~~r~vFLF~D~LL~~K~kk~~~~~---~~~~y~~K~~i~l~~i~v~e~~~~~--~~ 557 (732)
.++++|.+... .|+ ..-+.|++.|=++.|.|-|..+..... +.........|+|..+.+....+.. .+
T Consensus 11 ~~~k~G~L~kk~~~~~G~~~~k~Wk~rwfvL~~~~L~yykd~~~~~~~~~~~~~~~~p~g~I~L~~~~v~~~~~~~kr~~ 90 (129)
T 2p0d_A 11 EVEKSGLLNMTKIAQGGRKLRKNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAALAHGRHLSSRRN 90 (129)
T ss_dssp SEEEEEEEEEEEEEETTEECCCCCEEEEEEEESSEEEEESCC--------------CCSEEEECTTCEEEECTTSCSSSS
T ss_pred ceeEEEEEEEeeeccCCCcCCCCceEEEEEEeCCEEEEEcCcccccccccccccCCCCccEEEeCCcEEEECCCCCCCCc
Confidence 45566766542 121 133578999999999998865311000 0012345567889888776532222 35
Q ss_pred cEEEEEeecCCCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q psy9950 558 KFEIWFRKRKPNETFTLQSMSEDIKQAWTDELSNLLWK 595 (732)
Q Consensus 558 ~F~I~~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i~~ 595 (732)
.|.|. ......|.|+|.|+++.+.|+++|+.+|..
T Consensus 91 ~F~l~---t~~~~~yl~qA~s~~e~~~Wi~aI~~~i~~ 125 (129)
T 2p0d_A 91 VLHIR---TIPGHEFLLQSDHETELRAWHRALRTVIER 125 (129)
T ss_dssp EEEEE---CTTSCEEEEECSCHHHHHHHHHHHHHHHHH
T ss_pred EEEEE---cCCCCEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 67664 233468999999999999999999999854
No 64
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=96.88 E-value=0.0032 Score=57.49 Aligned_cols=101 Identities=11% Similarity=0.076 Sum_probs=65.3
Q ss_pred cccccccEEEE--eCC-CCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceE---EEEecC---CCCCcEE
Q psy9950 490 RLLRQNEFIVS--QGK-GKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIG---ITAQIG---DSSTKFE 560 (732)
Q Consensus 490 rll~~g~l~v~--~~~-~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~---v~e~~~---~~~~~F~ 560 (732)
.++++|.+... .+. +.-+.|+++|-++.|.+-|...... .-..+..|+|..+. |..... ...+.|.
T Consensus 4 ~v~~~G~L~K~~~~~~~~~WkrRwfvL~~~~L~yyk~~~d~~-----~~~p~g~I~L~~~~~~~v~~~~~~~~~~~~~F~ 78 (134)
T 2y7b_A 4 SVEERGFLTIFEDVSGFGAWHRRWCVLSGNCISYWTYPDDEK-----RKNPIGRINLANCTSRQIEPANREFCARRNTFE 78 (134)
T ss_dssp CCCEEEEEEEEEEETTEEEEEEEEEEEETTEEEEESSHHHHT-----TSCCSEEEEGGGBCSSSCEECCTTTCCCTTEEE
T ss_pred CceEEeeEEEEcCCCCCCCcEEEEEEEECCEEEEECCCCccc-----ccCceEEEEhhhCccccccccchhhccCCCEEE
Confidence 45667777765 222 2345789999889888887432100 11335678888776 333221 3457898
Q ss_pred EEEeecCC----------------CeEEEEEcCCHHHHHHHHHHHHHHHHH
Q psy9950 561 IWFRKRKP----------------NETFTLQSMSEDIKQAWTDELSNLLWK 595 (732)
Q Consensus 561 I~~~~~~~----------------~~~~~L~A~S~eeK~~Wi~~I~~~i~~ 595 (732)
|....... ..+|.|+|.|+++++.|+++|+.+|..
T Consensus 79 i~~~~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al~~~i~~ 129 (134)
T 2y7b_A 79 LITVRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQVLVD 129 (134)
T ss_dssp EEEEEECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 87531111 147999999999999999999999744
No 65
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=96.87 E-value=0.0047 Score=56.24 Aligned_cols=94 Identities=12% Similarity=0.152 Sum_probs=67.6
Q ss_pred ccccccEEEEeC-C--CCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecCC---CCCcEEEEEe
Q psy9950 491 LLRQNEFIVSQG-K--GKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGD---SSTKFEIWFR 564 (732)
Q Consensus 491 ll~~g~l~v~~~-~--~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~---~~~~F~I~~~ 564 (732)
.++.|.+.+..+ . +.-+.|+++|=.+.|.+-|-.. .-.-+..|+|..+.|.+...+ ..++|+|+..
T Consensus 12 VirkGWL~k~~~g~~k~~wk~rWFVLt~~~L~yyKd~~--------eke~~G~IpL~~~~vr~v~~~~~~rk~~F~l~~~ 83 (125)
T 1dyn_A 12 VIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDE--------EKEKKYMLSVDNLKLRDVEKGFMSSKHIFALFNT 83 (125)
T ss_dssp EEEEEEEEESCCCGGGTSSEEEEEEEESSEEEEESSTT--------CSCEEEEEECTTEEEEECCSCSSSSCEEEEEEET
T ss_pred eEEEEEEEEecCccccCCceeeEEEEeccceeeecCCc--------ccccceEEECCCceEeccCCCCCCCceEEEEECC
Confidence 578888887432 2 2357888889889998887542 122456899999999885442 3467888653
Q ss_pred ec----CCCeEEEEEcCCHHHHHHHHHHHHHH
Q psy9950 565 KR----KPNETFTLQSMSEDIKQAWTDELSNL 592 (732)
Q Consensus 565 ~~----~~~~~~~L~A~S~eeK~~Wi~~I~~~ 592 (732)
.+ +..++|.|.|.|.++++.|++.|.++
T Consensus 84 d~r~v~~~h~~y~LsA~t~ee~~~Wi~s~~ra 115 (125)
T 1dyn_A 84 EQRNVYKDYRQLELACETQEEVDSWKASFLRA 115 (125)
T ss_dssp TSSCSSTTCSSEEEEESSHHHHHHHHHHHHHT
T ss_pred CCccccccceEEEEeCCCHHHHHHHHHHHHhC
Confidence 21 13469999999999999999999654
No 66
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=96.82 E-value=0.0037 Score=62.58 Aligned_cols=97 Identities=11% Similarity=0.126 Sum_probs=70.0
Q ss_pred ccccccccccEEEEeCC-----CCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecC---C--CC
Q psy9950 487 EQGRLLRQNEFIVSQGK-----GKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIG---D--SS 556 (732)
Q Consensus 487 ~~grll~~g~l~v~~~~-----~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~---~--~~ 556 (732)
.....+++|.+....+. ..-+.|+++|-++.|.+.+.... ...+..|+|..+.+..... + ..
T Consensus 102 ~l~~v~k~G~L~Kkg~~~~~~~k~WkkRwfVL~~~~L~Yyk~~~~--------~~p~g~I~L~~~~~v~~~~~~~~~~k~ 173 (211)
T 1u5e_A 102 DLPFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKD--------KQQKGEFAIDGYDVRMNNTLRKDGKKD 173 (211)
T ss_dssp GCSSEEEEEEEEEEEHHHHTTTCCCEEEEEEEETTEEEEESSTTC--------SSCSEEEECTTCEEEECGGGCSSTTGG
T ss_pred hcCCccEEEEEEEECCCCCcCCCCcEeEEEEEECCEEEEEcCCCC--------ccceEEEEeCCcEEEEcCCccccCCCC
Confidence 33567888888776542 24568999999998888875421 2346788998888876421 2 23
Q ss_pred CcEEEEEeecCCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q psy9950 557 TKFEIWFRKRKPNETFTLQSMSEDIKQAWTDELSNLLW 594 (732)
Q Consensus 557 ~~F~I~~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i~ 594 (732)
+.|.|.. ....+|.|+|.|+++++.|+.+|+.+|.
T Consensus 174 ~~F~I~t---~~~r~~~l~A~s~~e~~~Wi~aL~~ai~ 208 (211)
T 1u5e_A 174 CCFEICA---PDKRIYQFTAASPKDAEEWVQQLKFILQ 208 (211)
T ss_dssp GEEEEEC---SSSCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CEEEEEc---CCCCEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 5677752 2347999999999999999999999873
No 67
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=96.81 E-value=0.0051 Score=57.93 Aligned_cols=103 Identities=9% Similarity=0.083 Sum_probs=69.8
Q ss_pred cccccEEEEeCC-CCeeEEEEEccCCeEEEEEeeeCC--------CC--CCC----------------------------
Q psy9950 492 LRQNEFIVSQGK-GKKCLRHVFLFEELILFSKARRFP--------DR--KNL---------------------------- 532 (732)
Q Consensus 492 l~~g~l~v~~~~-~kk~~r~vFLF~D~LL~~K~kk~~--------~~--~~~---------------------------- 532 (732)
++.|.+.+..+- +.-..++++||.+-|.|++.+... .. ...
T Consensus 2 ~k~G~L~~~~~~~~~w~~~~fvL~~~~L~y~~e~s~~~~~~~~e~~~~~~~~~~~~~~~n~~fh~~~~~~~e~~~~~l~E 81 (150)
T 2fjl_A 2 IKNGILYLEDPVNHEWYPHYFVLTSSKIYYSEETSSDQGNEDEEEPKEASGSTELHSSLEVLFQGPNPAILEPEREHLDE 81 (150)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEETTEEEECCCCSCSSCCSCCCCSCCCCCSCCCCCCSSSGGGSSCSTTSCTTCSSSCT
T ss_pred CcceEEEeecCCCCCceEeEEEEECCEEEEEeeccccccccCcccccccCCchhhcccchhccccCCccccchhHhcccc
Confidence 467888877665 345678899999999998833200 00 000
Q ss_pred ---cceEEeeeeeecceEEEEecCC---CCCcEEEEEeecCCCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q psy9950 533 ---DLYIYKHSMKMSDIGITAQIGD---SSTKFEIWFRKRKPNETFTLQSMSEDIKQAWTDELSNLLWK 595 (732)
Q Consensus 533 ---~~y~~K~~i~l~~i~v~e~~~~---~~~~F~I~~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i~~ 595 (732)
..-..++.|.|..+.|....++ ..+.|.|... ..+..+|.|.|.|.++...|+++|++++|.
T Consensus 82 ~~~lG~l~kG~IdL~gc~V~~~~~~~~~~~~vF~I~~~-~~~~~~~~laAds~Eem~dW~kaIreaa~~ 149 (150)
T 2fjl_A 82 NSPLGDLLRGVLDVPACQIAIRPEGKNNRLFVFSISMP-SVAQWSLDVAADSQEELQDWVKKIREVAQT 149 (150)
T ss_dssp TTTTTTCCCEEECSTTCEEEEETTCSSSCSCEEEEECT-TTSSCCEEEEESSHHHHHHHHHHHHHHHTT
T ss_pred cccccccccceEecCccEEEeccCCCCCCceEEEEeCC-CCCCceEEEEeCCHHHHHHHHHHHHHHHhh
Confidence 0012378899999988876543 2345666432 223568999999999999999999999753
No 68
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=96.68 E-value=0.0083 Score=54.99 Aligned_cols=95 Identities=8% Similarity=0.010 Sum_probs=57.2
Q ss_pred ccccccEEEEeCCC--CeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEec--C---CCCCcEEEEE
Q psy9950 491 LLRQNEFIVSQGKG--KKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQI--G---DSSTKFEIWF 563 (732)
Q Consensus 491 ll~~g~l~v~~~~~--kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~--~---~~~~~F~I~~ 563 (732)
+.+.|.+....+.+ .-+.|+++|=+++|.+-|..... ...-.-...|+|..+.|.... . ...+.|++.
T Consensus 8 ~~~~G~L~KqG~~~~K~WKrRwFVL~~~~LyYfk~~~~~----~~~~~p~G~I~L~g~tV~~~~~~~~~~~~k~~F~~v- 82 (126)
T 1wi1_A 8 MKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYR----EKKAEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAV- 82 (126)
T ss_dssp EEEEEEEEEECSSSCCSCEEEEEEEEEEETTEEEEEECC----SSSSCCSEEEECSSCEEEECCCCSSCCSCSSEEEEE-
T ss_pred CceeEEEEEeCCCcccccceEEEEEeCCEEEEEEccccc----ccCCCCceEEECCCcEEEEecCCcccccCceEEEEe-
Confidence 44556555432221 33567777777766666621100 001123467788887766321 1 123556654
Q ss_pred eecCCCeEEEEEcCCHHHHHHHHHHHHHHH
Q psy9950 564 RKRKPNETFTLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 564 ~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i 593 (732)
..+++|.|.|.|+++++.|+++|.+++
T Consensus 83 ---~~~~ty~~~Adseee~~~WikAi~~A~ 109 (126)
T 1wi1_A 83 ---KEGDTVIFASDDEQDRILWVQAMYRAT 109 (126)
T ss_dssp ---CSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred ---cCCceEEEEcCCHHHHHHHHHHHHHHh
Confidence 345689999999999999999999985
No 69
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=96.65 E-value=0.014 Score=53.57 Aligned_cols=83 Identities=13% Similarity=0.157 Sum_probs=60.9
Q ss_pred eEEEEEccCCeEEEEEeeeCCCCCCCcce--EEeeeeeecceEEEEecCC--CCCcEEEEEeecCCCeEEEEEcCCHHHH
Q psy9950 507 CLRHVFLFEELILFSKARRFPDRKNLDLY--IYKHSMKMSDIGITAQIGD--SSTKFEIWFRKRKPNETFTLQSMSEDIK 582 (732)
Q Consensus 507 ~~r~vFLF~D~LL~~K~kk~~~~~~~~~y--~~K~~i~l~~i~v~e~~~~--~~~~F~I~~~~~~~~~~~~L~A~S~eeK 582 (732)
+.+++.|-.+.|+|-+.+.... .....| .-...|+|....|. ..++ .++.|.|.. ...+..|.|+|.|.++.
T Consensus 25 kr~W~vL~g~~L~yf~~~~~~~-~~~~~~~~~P~~~i~L~g~~V~-~~e~~~~~~~F~L~~--~~~G~~Y~fqA~s~~~~ 100 (126)
T 2dtc_A 25 TRYWVVLSGATLLYYGAKSLRG-TDRKHYKSTPGKKVSIVGWMVQ-LPDDPEHPDIFQLNN--PDKGNVYKFQTGSRFHA 100 (126)
T ss_dssp EEEEEEEETTEEEEEEBSSSCC-SSGGGBCSSCSEEEECTTCEEE-CCCCTTSTTEEEEEC--TTSCSEEEEECSSHHHH
T ss_pred ccEEEEEeCCEEEEEccccccc-ccccccccCCCceEEeCCCEEE-ecCCCCCCCEEEEee--CCCCCEEEEeCCCHHHH
Confidence 5789999999999999764222 112223 23568899999886 3433 346788852 23467899999999999
Q ss_pred HHHHHHHHHHH
Q psy9950 583 QAWTDELSNLL 593 (732)
Q Consensus 583 ~~Wi~~I~~~i 593 (732)
..|+++|+.++
T Consensus 101 ~~W~~ai~~a~ 111 (126)
T 2dtc_A 101 ILWHKHLDDAC 111 (126)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999986
No 70
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=96.44 E-value=0.011 Score=53.36 Aligned_cols=85 Identities=9% Similarity=0.080 Sum_probs=53.9
Q ss_pred CeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecC--CCCCcEEEEEeecCCCeEEEEEcCCHHHH
Q psy9950 505 KKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIG--DSSTKFEIWFRKRKPNETFTLQSMSEDIK 582 (732)
Q Consensus 505 kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~--~~~~~F~I~~~~~~~~~~~~L~A~S~eeK 582 (732)
.-+.|++.|=++.|.+-|..+.... + ..+.-...|.+....+....+ ...+.|.|.. ....+|.|+|.|+++.
T Consensus 31 ~Wk~rwfvL~~~~L~yyk~~~~~~~-~-~~~~~~~~i~l~~~~~~~~~~~~~r~~~F~i~~---~~~~~~~f~A~s~~e~ 105 (123)
T 1wjm_A 31 SWQNVYCVLRRGSLGFYKDAKAASA-G-VPYHGEVPVSLARAQGSVAFDYRKRKHVFKLGL---QDGKEYLFQAKDEAEM 105 (123)
T ss_dssp CCEEEEEEEETTEEEEESSHHHHTT-T-CBSSSCCCEECTTCEEEECTTCSSCSSEEEEEC---SSSCEEEEECSSHHHH
T ss_pred CccEEEEEEECCEEEEEEccccccc-C-cccCCCceEEccCcEEeecccccCCCCEEEEEE---cCCcEEEEECCCHHHH
Confidence 3467899999999988876532110 0 011111245555444433222 2356677742 3347999999999999
Q ss_pred HHHHHHHHHHHH
Q psy9950 583 QAWTDELSNLLW 594 (732)
Q Consensus 583 ~~Wi~~I~~~i~ 594 (732)
+.|+++|+.++.
T Consensus 106 ~~Wi~ai~~~~~ 117 (123)
T 1wjm_A 106 SSWLRVVNAAIA 117 (123)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999999863
No 71
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=96.43 E-value=0.011 Score=52.01 Aligned_cols=92 Identities=12% Similarity=0.105 Sum_probs=56.2
Q ss_pred ccccccEEEEeCC-CCeeEEEEEccCC-eEEEEEeeeCCCCCCCcceEEeeeeeecceEE--EE--------ecCCC--C
Q psy9950 491 LLRQNEFIVSQGK-GKKCLRHVFLFEE-LILFSKARRFPDRKNLDLYIYKHSMKMSDIGI--TA--------QIGDS--S 556 (732)
Q Consensus 491 ll~~g~l~v~~~~-~kk~~r~vFLF~D-~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v--~e--------~~~~~--~ 556 (732)
++++|.+....+. +.-+.|++.|..+ .|.+-+.... ...+..|++....+ .. ..++. +
T Consensus 5 ~~~~G~L~K~g~~~k~WkkR~fvL~~~~~L~yyk~~~~--------~~~~g~i~l~~~~i~l~~~~~v~~v~~~~~~~~~ 76 (112)
T 3aj4_A 5 FVKSGWLLRQSTILKRWKKNWFDLWSDGHLIYYDDQTR--------QNIEDKVHMPMDCINIRTGQECRDTQPPDGKSKD 76 (112)
T ss_dssp CSEEEEEEEECSSSCCEEEEEEEECTTSEEEEESSTTC--------CSEEEEEEHHHHEEEEEEGGGCCSCCCSTTCCGG
T ss_pred eeEEEEEEeeCCCCCCeeceEEEEeeCCEEEEEcCCCC--------CCCCccccccccceeecccccccccCCCCCCCcC
Confidence 4667777665332 3446788888555 6666654311 12344555544321 11 11111 3
Q ss_pred CcEEEEEeecCCCeEEEEEcCCHHHHHHHHHHHHHHH
Q psy9950 557 TKFEIWFRKRKPNETFTLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 557 ~~F~I~~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i 593 (732)
+.|.|.. ....+|.|+|.|+++++.|+++|++++
T Consensus 77 ~~F~i~~---~~~r~~~l~a~s~~e~~~Wi~al~~a~ 110 (112)
T 3aj4_A 77 CMLQIVC---RDGKTISLCAESTDDCLAWKFTLQDSR 110 (112)
T ss_dssp GEEEEEE---TTSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred cEEEEEe---cCCcEEEEEeCCHHHHHHHHHHHHHHh
Confidence 4677753 346799999999999999999999874
No 72
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=96.42 E-value=0.017 Score=59.78 Aligned_cols=86 Identities=10% Similarity=0.001 Sum_probs=59.4
Q ss_pred eeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecCC--CCCcEEEEEeecCCCeEEEEEcCCHHHHH
Q psy9950 506 KCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGD--SSTKFEIWFRKRKPNETFTLQSMSEDIKQ 583 (732)
Q Consensus 506 k~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~--~~~~F~I~~~~~~~~~~~~L~A~S~eeK~ 583 (732)
-+.|++.|-++.|.|-|..+.. ........+..|+|.+..+....++ ..+.|.|.. ....+|.|+|.|+++.+
T Consensus 39 WkrRWfVL~~~~L~yyK~~~~~--~~~~~~~p~g~I~L~~~~v~~~~~~~kk~~~F~I~t---~~~r~y~f~A~s~ee~~ 113 (263)
T 3a8p_A 39 WKQYWVTLKGCTLLFYETYGKN--STEQNSAPRCALFAEDSIVQSVPEHPKKEHVFCLSN---SCGDVYLFQATSQTDLE 113 (263)
T ss_dssp CEEEEEEEETTEEEEESSCCC--------CCCSEEEECTTCEEEECTTCSSCSSEEEEEC---TTSCEEEEECSSHHHHH
T ss_pred ceEEEEEEcCCEEEEEecCccc--ccccccCccceEEcCCcEEEECCcCCCCCCEEEEEc---CCCcEEEEEcCCHHHHH
Confidence 3578999999999888864210 0011223456788887776654333 356777752 25679999999999999
Q ss_pred HHHHHHHHHHHHH
Q psy9950 584 AWTDELSNLLWKQ 596 (732)
Q Consensus 584 ~Wi~~I~~~i~~q 596 (732)
.|+++|+.++...
T Consensus 114 ~Wi~aI~~a~~~~ 126 (263)
T 3a8p_A 114 NWVTAIHSACASL 126 (263)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 9999999998654
No 73
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=96.35 E-value=0.0088 Score=57.05 Aligned_cols=78 Identities=14% Similarity=0.052 Sum_probs=48.7
Q ss_pred eeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecc--eEEEEec--CCCCCcEEEEEeecCCCeEEEEEcCCHHH
Q psy9950 506 KCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSD--IGITAQI--GDSSTKFEIWFRKRKPNETFTLQSMSEDI 581 (732)
Q Consensus 506 k~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~--i~v~e~~--~~~~~~F~I~~~~~~~~~~~~L~A~S~ee 581 (732)
-+.|+++|-++.|.+-|..+.. .-..+..|+|.. +.+.... ....+.|.|. .+..+|.|+|.|+++
T Consensus 29 WkkRwfvL~~~~L~yyk~~~~~------~~~~~g~i~l~~~~~~~~~~~~~~~~~~~F~I~----t~~r~~~l~A~s~~e 98 (168)
T 2j59_M 29 WKQMYVVLRGHSLYLYKDKREQ------TTPSEEEQPISVNACLIDISYSETKRKNVFRLT----TSDCECLFQAEDRDD 98 (168)
T ss_dssp CEEEEEEEETTEEEEESCTTCC--------------CEECSSCEEEECSSSCSCSSEEEEE----CSSCEEEEECSSHHH
T ss_pred ceEEEEEEeCCEEEEEECCccc------ccccCCceEecccceEEEeccccCCCCCEEEEE----eCCceEEEEcCCHHH
Confidence 4678999999988887754210 112344555544 2222111 2235677775 334789999999999
Q ss_pred HHHHHHHHHHHH
Q psy9950 582 KQAWTDELSNLL 593 (732)
Q Consensus 582 K~~Wi~~I~~~i 593 (732)
++.|+++|+.++
T Consensus 99 ~~~Wi~ai~~~~ 110 (168)
T 2j59_M 99 MLAWIKTIQESS 110 (168)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHH
Confidence 999999999886
No 74
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=96.23 E-value=0.025 Score=50.30 Aligned_cols=77 Identities=16% Similarity=0.141 Sum_probs=52.1
Q ss_pred eeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEE--E--ecCCCCCcEEEEEeecCCCeEEEEEcCCHHH
Q psy9950 506 KCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGIT--A--QIGDSSTKFEIWFRKRKPNETFTLQSMSEDI 581 (732)
Q Consensus 506 k~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~--e--~~~~~~~~F~I~~~~~~~~~~~~L~A~S~ee 581 (732)
-+.|++.|=++.|.+-|..+. .. -...|+|....+. . ......+.|.|.+ ....+|.|+|.|+++
T Consensus 20 Wk~rwfvL~~~~L~~yk~~~~----~~----p~~~i~l~~~~~~~~~~~~~~~r~~~F~l~~---~~~~~y~f~A~s~ee 88 (112)
T 3cxb_B 20 WKTCFVVLSNGILYQYPDRTD----VI----PLLSVNMGGEQCGGCRRANTTDRPHAFQVIL---SDRPCLELSAESEAE 88 (112)
T ss_dssp CEEEEEEEETTEEEEESSSSC----CS----CSEEEETTC-CEEEEEECCCSSCTTEEEEEE---TTSCCEEEECSSHHH
T ss_pred ceEEEEEEECCEEEEECCCCC----CC----ccceEEecCCEEEeeeccCCCCCCeEEEEEc---CCCCEEEEEcCCHHH
Confidence 357888888888888875421 11 1345677644332 1 1223457888864 335689999999999
Q ss_pred HHHHHHHHHHHH
Q psy9950 582 KQAWTDELSNLL 593 (732)
Q Consensus 582 K~~Wi~~I~~~i 593 (732)
.+.|+++|+.++
T Consensus 89 ~~~Wi~ai~~~~ 100 (112)
T 3cxb_B 89 MAEWMQHLCQAV 100 (112)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999999886
No 75
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=96.13 E-value=0.018 Score=52.60 Aligned_cols=95 Identities=14% Similarity=0.114 Sum_probs=56.1
Q ss_pred ccccccEEEEeCC--CCeeEEEEEccC---CeEEEEEeeeCCCCCCCcceEEeeeeeecce-EEEEec-C---CCCCcEE
Q psy9950 491 LLRQNEFIVSQGK--GKKCLRHVFLFE---ELILFSKARRFPDRKNLDLYIYKHSMKMSDI-GITAQI-G---DSSTKFE 560 (732)
Q Consensus 491 ll~~g~l~v~~~~--~kk~~r~vFLF~---D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i-~v~e~~-~---~~~~~F~ 560 (732)
..++|.+....+. +.-+.|++.| + +.+|+-.... .+ ....-..+..|+|..+ .|.... . +..++|.
T Consensus 15 ~~~~G~L~K~g~~~~k~WkrRwFvL-~~~~~~~L~Y~k~~--~~-~~~~~~~~G~I~L~~~~~V~~~~~~~~~~~~~~F~ 90 (126)
T 1v5p_A 15 NRICGFLDIEDNENSGKFLRRYFIL-DTQANCLLWYMDNP--QN-LAVGAGAVGSLQLTYISKVSIATPKQKPKTPFCFV 90 (126)
T ss_dssp CCEECCEEEECTTCSSCEEEEEEEE-ETTTTEEEEESSCT--TT-SCTTCCCSEEEETTTCCEEEECCTTTSCSCSSEEE
T ss_pred CceEEEEEEeCCCCCCCccceEEEE-ecCCCCEEEEECCC--CC-CCCCceeeEEEECCCccEEecCCcccCCCCCEEEE
Confidence 3457877765422 2334555555 4 6666553220 00 0112345677888874 344322 1 1234564
Q ss_pred EEEeecCCCeEEEEEcCCHHHHHHHHHHHHHHH
Q psy9950 561 IWFRKRKPNETFTLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 561 I~~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i 593 (732)
| ..+.++|.|+|.|+++.+.|+++|+.++
T Consensus 91 i----~t~~r~y~l~A~s~~e~~~Wi~al~~a~ 119 (126)
T 1v5p_A 91 I----NALSQRYFLQANDQKDLKDWVEALNQAS 119 (126)
T ss_dssp E----ECSSCEEEEECSSHHHHHHHHHHHHHTT
T ss_pred E----ECCCEEEEEECCCHHHHHHHHHHHHHHH
Confidence 4 3567899999999999999999999874
No 76
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=95.93 E-value=0.023 Score=50.95 Aligned_cols=90 Identities=12% Similarity=0.143 Sum_probs=56.2
Q ss_pred ccccccEEEEeCCCCeeEEEEEccCC---eEEEE-EeeeCCCCCCCcceEEeeeeeecceEEEEe--cCC--CCCcEEEE
Q psy9950 491 LLRQNEFIVSQGKGKKCLRHVFLFEE---LILFS-KARRFPDRKNLDLYIYKHSMKMSDIGITAQ--IGD--SSTKFEIW 562 (732)
Q Consensus 491 ll~~g~l~v~~~~~kk~~r~vFLF~D---~LL~~-K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~--~~~--~~~~F~I~ 562 (732)
-++.|.+... ++++.-.+..|.+.+ .+|+. |..+ ...-...|+|..+.|... ..+ ..+.|.|.
T Consensus 8 ~~~~G~L~k~-~~~~~WkkrWfVL~~~~~~~Ly~Yk~~~--------d~~p~g~I~L~g~~V~~~~~~~~~~~~~~Fki~ 78 (112)
T 2coc_A 8 SLLCGPLRLS-ESGETWSEVWAAIPMSDPQVLHLQGGSQ--------DGRLPRTIPLPSCKLSVPDPEERLDSGHVWKLQ 78 (112)
T ss_dssp SSSEEEEEEE-SSSSCEEEEEEECCTTCTTCEEEECCTT--------CSSSCSEECGGGCEEECCCSSSCCSSSEEEEEE
T ss_pred ceEEEEEEec-CCCCCceEEEEEEECCCccEEEEECCCC--------ccCcceEEEcCCCEEEecCcccccCCCCEEEEe
Confidence 3455777664 333443444444444 35544 3321 112456899988888742 222 23567775
Q ss_pred EeecCCCeEEEEEcCCHHHHHHHHHHHHHHH
Q psy9950 563 FRKRKPNETFTLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 563 ~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i 593 (732)
.+..+|.|.|.|+++.+.|++.|+.+.
T Consensus 79 ----~~~~~y~f~A~s~e~~~~Wl~al~~A~ 105 (112)
T 2coc_A 79 ----WAKQSWYLSASSAELQQQWLETLSTAA 105 (112)
T ss_dssp ----ETTEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred ----cCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 345799999999999999999999874
No 77
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=95.87 E-value=0.08 Score=48.19 Aligned_cols=94 Identities=10% Similarity=0.088 Sum_probs=56.2
Q ss_pred ccccccccEEEEeCC-CCeeEEEEEcc-CCeEEEEEeeeCCCCCCCcceEEeeeeeec-ce-EEEE------e----cCC
Q psy9950 489 GRLLRQNEFIVSQGK-GKKCLRHVFLF-EELILFSKARRFPDRKNLDLYIYKHSMKMS-DI-GITA------Q----IGD 554 (732)
Q Consensus 489 grll~~g~l~v~~~~-~kk~~r~vFLF-~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~-~i-~v~e------~----~~~ 554 (732)
+.++++|.+..+.+. +.-+.|++.|. +..|.+-|.... . ..+..|.+. ++ .+.. . ...
T Consensus 6 ~~v~~~G~L~K~g~~~k~WkkRwFVL~~~~~L~Yyk~~~~---~-----~~~g~i~l~~~~~~i~~~~~~~~v~~~~~~~ 77 (130)
T 2d9v_A 6 SGLVRGGWLWRQSSILRRWKRNWFALWLDGTLGYYHDETA---Q-----DEEDRVVIHFNVRDIKVGQECQDVQPPEGRS 77 (130)
T ss_dssp CCEEEEEEEEEECSSSCCEEEEEEEEETTTEEEEESSSST---T-----SEEEEEECTTTEEEEEEGGGCSSCCCCSSCC
T ss_pred CceeEEEEEEeecCccCCceeeEEEEccCCEEEEEeCCCC---C-----CcCceEecccceeEEeccccccccCCCCCCC
Confidence 556778887765332 24467788885 566666654321 1 123333332 11 1111 0 112
Q ss_pred CCCcEEEEEeecCCCeEEEEEcCCHHHHHHHHHHHHHHH
Q psy9950 555 SSTKFEIWFRKRKPNETFTLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 555 ~~~~F~I~~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i 593 (732)
..+.|.|.. ....+|.|+|.|+++++.|+++|+.++
T Consensus 78 ~~~~F~I~~---~~~r~~~l~A~s~~e~~~Wi~al~~a~ 113 (130)
T 2d9v_A 78 RDGLLTVNL---REGSRLHLCAETRDDAIAWKTALMEAN 113 (130)
T ss_dssp TTTEEEEEE---TTSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred cCcEEEEEe---CCCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence 346788764 234689999999999999999999875
No 78
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=95.86 E-value=0.054 Score=49.10 Aligned_cols=86 Identities=12% Similarity=0.179 Sum_probs=56.5
Q ss_pred eeEEEEEccCCeEEEEEeeeCCCCCCC---cce-EEeeeeeecceEEEEec-CC--CCCcEEEEEeecCCCeEEEEEcCC
Q psy9950 506 KCLRHVFLFEELILFSKARRFPDRKNL---DLY-IYKHSMKMSDIGITAQI-GD--SSTKFEIWFRKRKPNETFTLQSMS 578 (732)
Q Consensus 506 k~~r~vFLF~D~LL~~K~kk~~~~~~~---~~y-~~K~~i~l~~i~v~e~~-~~--~~~~F~I~~~~~~~~~~~~L~A~S 578 (732)
-+.+++.|=.+.|.|-|-.+.....+. ..| .-...|.|..+.+.... +. ..+.|.|. ......|.|+|.|
T Consensus 31 W~~~w~VL~~~~L~~yKd~~~~~~~~~~~~~~~~~~~~~i~L~~a~v~~~~~d~~krk~vF~l~---t~~~~~ylfqA~s 107 (124)
T 3pp2_A 31 WSASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFSTPEYTVELRGATLSWAPKDKSSRKNVLELR---SRDGSEYLIQHDS 107 (124)
T ss_dssp CEEEEEEEETTEEEEESCSBCC---CBCCGGGGCSEEEEEECTTCEEEECCGGGCSSSSEEEEE---CTTSCEEEEECSC
T ss_pred ceEEEEEEECCEEEEEecCccccccCccCcccccCCcceEEcCCCEEEecccccCCCceEEEEE---CCCCCEEEEECCC
Confidence 357899999999999885432111100 011 33467888776665432 22 24556654 2345799999999
Q ss_pred HHHHHHHHHHHHHHHH
Q psy9950 579 EDIKQAWTDELSNLLW 594 (732)
Q Consensus 579 ~eeK~~Wi~~I~~~i~ 594 (732)
+++.+.|+..|+.+|.
T Consensus 108 ~~e~~~Wi~aI~~aI~ 123 (124)
T 3pp2_A 108 EAIISTWHKAIAQGIQ 123 (124)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999999873
No 79
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=95.72 E-value=0.03 Score=60.18 Aligned_cols=97 Identities=10% Similarity=0.149 Sum_probs=68.0
Q ss_pred cccccccEEEEeCC-CCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecC-CCCCcEEEEEeec-
Q psy9950 490 RLLRQNEFIVSQGK-GKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIG-DSSTKFEIWFRKR- 566 (732)
Q Consensus 490 rll~~g~l~v~~~~-~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~-~~~~~F~I~~~~~- 566 (732)
..+++|.+....+. +..+.|+++|-++.|.+-+.... ...+..|+|..+.|..... +.+++|.|.....
T Consensus 212 ~~~k~G~L~K~g~~~k~WkkRwFVL~~~~L~Yyk~~~~--------~~p~G~I~L~~~~v~~~~~~~~~~~F~I~~~~~~ 283 (347)
T 2r09_A 212 NPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTTD--------KEPRGIIPLENLSIREVEDPRKPNCFELYNPSHK 283 (347)
T ss_dssp CCCEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTTC--------SSCSEEEECTTCEEEEECCSSCSSEEEEECSSST
T ss_pred ccccCCeeEecCCCcccceeEEEEEcCCEEEEEcCCCc--------cCCcEEEEcCCeEEEEccCCCCCCEEEEEeCCcc
Confidence 35778888765443 34567899998888877765421 1245678898888765432 3456788753211
Q ss_pred -----------------CCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q psy9950 567 -----------------KPNETFTLQSMSEDIKQAWTDELSNLLW 594 (732)
Q Consensus 567 -----------------~~~~~~~L~A~S~eeK~~Wi~~I~~~i~ 594 (732)
....+|.|+|.|+++++.|+++|+.++.
T Consensus 284 ~~~~~~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~ai~ 328 (347)
T 2r09_A 284 GQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASIS 328 (347)
T ss_dssp TCCCCCEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence 1246899999999999999999999874
No 80
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=95.65 E-value=0.019 Score=59.43 Aligned_cols=98 Identities=12% Similarity=0.110 Sum_probs=64.9
Q ss_pred ccccccccEEEEeCCCCeeEEEEEccCC-------eEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEec--CCCCCcE
Q psy9950 489 GRLLRQNEFIVSQGKGKKCLRHVFLFEE-------LILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQI--GDSSTKF 559 (732)
Q Consensus 489 grll~~g~l~v~~~~~kk~~r~vFLF~D-------~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~--~~~~~~F 559 (732)
+..+++|.+... + .-+.|+++|-++ .|.+-|..+.- ....-..+..|.|.++...... ....+.|
T Consensus 8 ~~v~k~G~L~K~--K-~WkkRwFVL~~~~~~G~~~~L~YYk~~~~~---~~~~~~p~g~I~L~~~~~V~~~~~~~~~~~F 81 (264)
T 1qqg_A 8 SDVRKVGYLRKP--K-SMHKRFFVLRAASEAGGPARLEYYENEKKW---RHKSSAPKRSIPLESCFNINKRADSKNKHLV 81 (264)
T ss_dssp -CEEEEEEEECT--T-TCCEEEEEEECCBTTTBSSEEEEESSHHHH---HTTCSCCSEEEEGGGEEEEEEECCSSCSSEE
T ss_pred CCccEEEEEEEC--C-CCEeEEEEEECCCCCCCCCEEEEECCCccc---cccccCcceEEEeeceEEEEeccCCCCCcEE
Confidence 456778877654 3 567899999998 77777654310 0000135677888887633322 2335678
Q ss_pred EEEEeecCCCeEEEEEcCCHHHHHHHHHHHHHHHHHH
Q psy9950 560 EIWFRKRKPNETFTLQSMSEDIKQAWTDELSNLLWKQ 596 (732)
Q Consensus 560 ~I~~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i~~q 596 (732)
.|. .+..+|.|.|.|+++++.|+++|+.++...
T Consensus 82 ~I~----t~~rty~l~A~se~e~~~Wi~aL~~~~~~~ 114 (264)
T 1qqg_A 82 ALY----TRDEHFAIAADSEAEQDSWYQALLQLHNRA 114 (264)
T ss_dssp EEE----ESSCEEEEECSSHHHHHHHHHHHHHHC---
T ss_pred EEE----ECCEEEEEEeCCHHHHHHHHHHHHHHHHhc
Confidence 775 236899999999999999999999987543
No 81
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=95.58 E-value=0.046 Score=47.29 Aligned_cols=82 Identities=9% Similarity=0.128 Sum_probs=50.4
Q ss_pred eeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecC--CCCCcEEEEEeecCCCeEEEEEcCCHHHHH
Q psy9950 506 KCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIG--DSSTKFEIWFRKRKPNETFTLQSMSEDIKQ 583 (732)
Q Consensus 506 k~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~--~~~~~F~I~~~~~~~~~~~~L~A~S~eeK~ 583 (732)
-+.|++.|=++.|.+-|....... + ..+.-...|.+....+....+ ...+.|.|. .....+|.|+|.|+++.+
T Consensus 23 Wk~rwfvL~~~~L~yyk~~~~~~~-~-~~~~~~~~i~l~~~~~~~~~~~~~~~~~F~i~---~~~~~~~~~~A~s~~e~~ 97 (106)
T 1btn_A 23 WHNVYCVINNQEMGFYKDAKSAAS-G-IPYHSEVPVSLKEAICEVALDYKKKKHVFKLR---LSDGNEYLFQAKDDEEMN 97 (106)
T ss_dssp CEEEEEEEETTEEEEESSHHHHHH-T-CCSSSCCCEECTTCEEEECSSCCSSSSEEEEE---CTTSCEEEEECSSHHHHH
T ss_pred hhEEEEEEECCEEEEEeCCccccc-C-CCCCCcceEECCCCEEEEcccccCCccEEEEE---ecCCCEEEEECCCHHHHH
Confidence 357888898888888775431000 0 011112345555544432222 234567775 234579999999999999
Q ss_pred HHHHHHHHH
Q psy9950 584 AWTDELSNL 592 (732)
Q Consensus 584 ~Wi~~I~~~ 592 (732)
.|+.+|+.|
T Consensus 98 ~Wi~ai~~A 106 (106)
T 1btn_A 98 TWIQAISSA 106 (106)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHhcC
Confidence 999999763
No 82
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=95.07 E-value=0.025 Score=50.97 Aligned_cols=85 Identities=12% Similarity=0.027 Sum_probs=52.9
Q ss_pred eeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecC--CCCCcEEEEEeecCCCeEEEEEcCCHHHHH
Q psy9950 506 KCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIG--DSSTKFEIWFRKRKPNETFTLQSMSEDIKQ 583 (732)
Q Consensus 506 k~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~--~~~~~F~I~~~~~~~~~~~~L~A~S~eeK~ 583 (732)
-+.|++.|=.+.|.|-|..+.........+.-...|.|....+....+ ...+.|.|. .....+|.|+|.|+++.+
T Consensus 32 Wk~rw~vL~~~~L~~yk~~~~~~~~~~~~~~~~~~i~L~~~~v~~~~d~~kr~~~F~l~---t~~~~~~lfqA~s~~e~~ 108 (122)
T 1dro_A 32 WDKVYMAAKAGRISFYKDQKGYKSNPELTFRGEPSYDLQNAAIEIASDYTKKKHVLRVK---LANGALFLLQAHDDTEMS 108 (122)
T ss_dssp CEEEEEEESSSCCBEESSSSHHHHCTTCCSSCCCBCCCSSCCCEECCSSSSSTTEEEEE---CSSSCEEEEECSSSHHHH
T ss_pred ccEEEEEEECCEEEEEeCCcccccCCCcccCCCceEECCCCEEEeCCCCCCCCeEEEEE---EcCCCEEEEECCCHHHHH
Confidence 357888898888888875431100000011111346666554433222 224567664 235579999999999999
Q ss_pred HHHHHHHHHH
Q psy9950 584 AWTDELSNLL 593 (732)
Q Consensus 584 ~Wi~~I~~~i 593 (732)
.|+++|+.+|
T Consensus 109 ~Wi~ai~~~i 118 (122)
T 1dro_A 109 QWVTSLKAQS 118 (122)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999986
No 83
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=95.02 E-value=0.033 Score=60.75 Aligned_cols=94 Identities=11% Similarity=0.112 Sum_probs=62.6
Q ss_pred ccccccccEEEEeCCC--CeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecce----EEEEecCCC------C
Q psy9950 489 GRLLRQNEFIVSQGKG--KKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDI----GITAQIGDS------S 556 (732)
Q Consensus 489 grll~~g~l~v~~~~~--kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i----~v~e~~~~~------~ 556 (732)
+.++++|.+....+.. .-+.|+++|-++.|.+-|.... ...++.|.|..+ .|.+....+ .
T Consensus 267 ~~~~k~G~L~K~g~~~~k~WKkRwFVL~~~~L~YYk~~~d--------~~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~ 338 (386)
T 3lju_X 267 RNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLD--------AFARGEVFIGSKESGYTVLHGFPPSTQGHHWP 338 (386)
T ss_dssp CCCSEEEEEEECCTTSCSCCEEEEEEEETTEEEEESSTTC--------SBCSEEEECCCGGGTCEEEESCCTTCCSCCSC
T ss_pred cccceeeeEEEECCCCCCCCcccEEEEECCEEEEEecCCC--------cccceEEEeecceeeeeecccCCccccccCCC
Confidence 4567788877654332 3468999999999998875421 123456666443 233322211 2
Q ss_pred CcEEEEEeecCCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q psy9950 557 TKFEIWFRKRKPNETFTLQSMSEDIKQAWTDELSNLLW 594 (732)
Q Consensus 557 ~~F~I~~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i~ 594 (732)
+.|.|. .+..+|.|.|.|+++++.|+.+|+.+|.
T Consensus 339 ~~F~I~----t~~rty~l~A~s~~e~~~Wi~aL~~~i~ 372 (386)
T 3lju_X 339 HGITIV----TPDRKFLFACETESDQREWVAAFQKAVD 372 (386)
T ss_dssp EEEEEE----CSSCEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred cEEEEE----eCCeEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 445553 4568999999999999999999999873
No 84
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.87 E-value=0.049 Score=50.40 Aligned_cols=94 Identities=13% Similarity=0.099 Sum_probs=60.0
Q ss_pred cccEEEEeCC---CCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecCCCCCcEEEEEeecC--C
Q psy9950 494 QNEFIVSQGK---GKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGDSSTKFEIWFRKRK--P 568 (732)
Q Consensus 494 ~g~l~v~~~~---~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~~~~~F~I~~~~~~--~ 568 (732)
.|.+.+...+ -|.-.++.|.|.|..|+.=+.+... .+ .-...|.|..+.|+..+.....+|.|.+.... +
T Consensus 12 ~~~l~~~~pkk~tlK~~KrrWFvlk~~~L~YyK~kee~-~~----ePig~I~L~gceV~pd~~~~~~kf~ikl~iPs~~g 86 (137)
T 2ys3_A 12 KDHLRIFRPRKLTLKGYRQHWVVFKETTLSYYKSQDEA-PG----DPIQQLNLKGCEVVPDVNVSGQKFCIKLLVPSPEG 86 (137)
T ss_dssp ECCCEECCTTSCCSSSSCCCEEEECSSCEEEESSTTTT-TS----CCSCCBCTTTCEEEECCBGGGTBEEEEEEEECSSS
T ss_pred hHHHHhhCccccccccceeEEEEEeCCEEEEECCchhc-cC----CCceEEECCCCEEeccccccCCceEEEEEccCCCC
Confidence 3555554443 1223455688888777665432110 01 22346778888877664445677887665432 4
Q ss_pred CeEEEEEcCCHHHHHHHHHHHHHH
Q psy9950 569 NETFTLQSMSEDIKQAWTDELSNL 592 (732)
Q Consensus 569 ~~~~~L~A~S~eeK~~Wi~~I~~~ 592 (732)
..+|.|.|.|+++..+|+++++.+
T Consensus 87 ~r~y~l~cdsEeqy~~WMaA~rlA 110 (137)
T 2ys3_A 87 MSEIYLRCQDEQQYARWMAGCRLA 110 (137)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHHH
T ss_pred ceEEEEECCCHHHHHHHHHHHHHh
Confidence 478999999999999999999876
No 85
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=94.58 E-value=0.17 Score=55.16 Aligned_cols=94 Identities=14% Similarity=0.106 Sum_probs=65.0
Q ss_pred cccccEEEEeCC-CCeeEEEEEc--cCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEec--CCCCCcEEEEEeec
Q psy9950 492 LRQNEFIVSQGK-GKKCLRHVFL--FEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQI--GDSSTKFEIWFRKR 566 (732)
Q Consensus 492 l~~g~l~v~~~~-~kk~~r~vFL--F~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~--~~~~~~F~I~~~~~ 566 (732)
+++|.+....+. +.-+.|+++| =++.|.+-+... .-..+..|.|.++.++... .+.++.|.|.|...
T Consensus 147 ~keG~L~KrG~~~k~WkrRwFVL~~~~~~L~Yy~~~~--------~~~p~g~I~L~~~~~~~~~~~~~~~~~f~I~~~~~ 218 (386)
T 3lju_X 147 YREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRND--------AKEPKAVMKIEHLNATFQPAKIGHPHGLQVTYLKD 218 (386)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEETTTTEEEEEC-------------CCSEEEEGGGEEEEECHHHHTSTTCEEEEEEET
T ss_pred ccccceeeeccccCCceEEEEEEEcCCCEEEEECCCC--------ccCcccEEEeeccEEEEcccccCCCceEEEEEecC
Confidence 566766654333 2345677777 466666655431 1345678899998777632 24678899987766
Q ss_pred CCCeEEEEEcCCHHHHHHHHHHHHHHH
Q psy9950 567 KPNETFTLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 567 ~~~~~~~L~A~S~eeK~~Wi~~I~~~i 593 (732)
.+..+|.|+|.|.++...|+++|+.+.
T Consensus 219 ~~~R~y~l~A~s~~e~~~Wi~aIr~a~ 245 (386)
T 3lju_X 219 NSTRNIFIYHEDGKEIVDWFNALRAAR 245 (386)
T ss_dssp TEEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEcCCHHHHHHHHHhhhhcc
Confidence 667899999999999999999998874
No 86
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=94.37 E-value=0.12 Score=53.37 Aligned_cols=98 Identities=8% Similarity=-0.008 Sum_probs=59.1
Q ss_pred ccccccEEEEeCC-CCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecC-------CCCCcEEEE
Q psy9950 491 LLRQNEFIVSQGK-GKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIG-------DSSTKFEIW 562 (732)
Q Consensus 491 ll~~g~l~v~~~~-~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~-------~~~~~F~I~ 562 (732)
..++|.+....+. ++-+.|+++|-++.|.+.+...... ....+. .+.+..+.+..... ...++|.|.
T Consensus 168 p~~~G~L~k~~~~~k~WkkR~fvL~~~~L~yyk~~~~~~---~~~~i~--l~~l~~~~v~~~~~~~~~~~~~~~~~F~i~ 242 (291)
T 3tca_A 168 PELEGALYLKEDGKKSWKRRYFLLRASGIYYVPKGKTKT---SRDLAC--FIQFENVNIYYGIQCKMKYKAPTDHCFVLK 242 (291)
T ss_dssp CCCEEEEEEECTTSSCEEEEEEEECSSEEEECCTTCCSS---TTTCEE--EEEGGGCEEEEECSHHHHHCCSSSCEEEEE
T ss_pred CceEEEEEEeCCCCCCceEEEEEEeCCEEEEEecCcccc---ccCcee--eccceeEEEEecCccccccCCCCCeEEEEE
Confidence 3567877766544 3456789999888887776542111 111111 22334444433221 124567775
Q ss_pred Eeec--CCCeEEEEEcCCHHHHHHHHHHHHHHH
Q psy9950 563 FRKR--KPNETFTLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 563 ~~~~--~~~~~~~L~A~S~eeK~~Wi~~I~~~i 593 (732)
.... ....+|.|+|.|++++..|+.+|+.|.
T Consensus 243 ~~~~~~~~~~~~~l~A~s~~e~~~Wi~air~Ak 275 (291)
T 3tca_A 243 HPQIQKESQYIKYLCCDDARTLSQWVMGIRIAK 275 (291)
T ss_dssp CTTCCSCCTTSEEEECSSHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCceEEEEECCCHHHHHHHHHHHHHHh
Confidence 4221 234679999999999999999998775
No 87
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*
Probab=94.24 E-value=0.11 Score=49.40 Aligned_cols=83 Identities=14% Similarity=0.122 Sum_probs=60.4
Q ss_pred CeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecCCCCCcEEEEEeec--CCCeEEEEEcCCHHHH
Q psy9950 505 KKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGDSSTKFEIWFRKR--KPNETFTLQSMSEDIK 582 (732)
Q Consensus 505 kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~~~~~F~I~~~~~--~~~~~~~L~A~S~eeK 582 (732)
|.-.+|.|.|.|..|..-+.+... .+ .....|.|..+.|+..+.....+|.|-+... .+...+.|.|.+++..
T Consensus 64 KgyKryWFv~kd~~LsyYKskEe~-~g----eP~~~I~LrGCEVtpDVnva~~Kf~IkL~vP~~~gm~e~~Lrcd~E~qy 138 (173)
T 4f7h_A 64 KGYKQYWCTFKDTSISCYKSKEES-SG----TPAHQMNLRGCEVTPDVNISGQKFNIKLLIPVAEGMNEIWLRCDNEKQY 138 (173)
T ss_dssp CCCEEEEEEEETTEEEEESCGGGC-SS----CCSEEEECTTCEEEEEEETTTTEEEEEEEEEETTEEEEEEEEESSHHHH
T ss_pred ccceeEEEEEeCCEEEEEcCHhHh-cC----CCceEEecCceEEeccccccccceeEEEeccCCCCcceeeeecCCHHHH
Confidence 455779999999887665543211 12 2245678999999977766777887765442 3446899999999999
Q ss_pred HHHHHHHHHH
Q psy9950 583 QAWTDELSNL 592 (732)
Q Consensus 583 ~~Wi~~I~~~ 592 (732)
.+|+.+++-+
T Consensus 139 a~WMAAcrLA 148 (173)
T 4f7h_A 139 AHWMAACRLA 148 (173)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHhhhh
Confidence 9999999776
No 88
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=94.11 E-value=0.072 Score=48.04 Aligned_cols=83 Identities=13% Similarity=0.213 Sum_probs=50.9
Q ss_pred eeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecC----------CCCCcEEEEEeec--CCCeEEE
Q psy9950 506 KCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIG----------DSSTKFEIWFRKR--KPNETFT 573 (732)
Q Consensus 506 k~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~----------~~~~~F~I~~~~~--~~~~~~~ 573 (732)
-+.|++.|=+..|.+-+........ ..+..|.|+.+.-.+.+. +.++.|.|..... .+..++.
T Consensus 20 Wkkr~~vL~~~kL~~y~~~~~~~~~-----~p~~~Idl~~~~~V~~V~~~d~i~~~~~~~p~iF~I~~~~~~~~~~~~l~ 94 (117)
T 2rov_A 20 WVKKYVIVSSKKILFYDSEQDKEQS-----NPYMVLDIDKLFHVRPVTQTDVYRADAKEIPRIFQILYANEGISSAKNLL 94 (117)
T ss_dssp CCEEEEEEETTEEEEESCHHHHHTT-----CCSEEECGGGEEEEEECCTTTCSSSCTTTGGGEEEEEECSSSSTTCEEEE
T ss_pred cEEEEEEEECCEEEEEECCCCcccC-----CceEEEECcccEEEEEcccccccccccccCCcEEEEEeCCCCCCCCcEEE
Confidence 3567888878887777643210000 122355665543322221 1235588864321 2357999
Q ss_pred EEcCCHHHHHHHHHHHHHHH
Q psy9950 574 LQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 574 L~A~S~eeK~~Wi~~I~~~i 593 (732)
|.|.|++++++|+.+|+++|
T Consensus 95 l~A~s~~e~~~WV~aL~~~i 114 (117)
T 2rov_A 95 LLANSTEEQQKWVSRLVKKI 114 (117)
T ss_dssp EECSSHHHHHHHHHHHHHHC
T ss_pred EEeCCHHHHHHHHHHHHHHh
Confidence 99999999999999999875
No 89
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=93.52 E-value=0.46 Score=48.74 Aligned_cols=98 Identities=16% Similarity=0.086 Sum_probs=64.3
Q ss_pred cccccEEEEeC-CCCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecCC-----CCCcEEEEEee
Q psy9950 492 LRQNEFIVSQG-KGKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGD-----SSTKFEIWFRK 565 (732)
Q Consensus 492 l~~g~l~v~~~-~~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~-----~~~~F~I~~~~ 565 (732)
-.+|.+.+..+ +++-+.||++|=.+.|.+.+..+.+ ..-.+...+++.++.|...... .+..|.+.++.
T Consensus 133 ~~~G~L~~ke~~~K~WkkRyfvLr~sgLy~~~k~~sk-----~~r~l~~~~~L~~~~vy~~~~~kKk~kaPt~~~F~ik~ 207 (256)
T 3hk0_A 133 EIQGFLHVKELGKKSWKKLYVCLRRSGLYCSTKGTSA-----APRHLQLLADLEDSNIFSLIAGRKQYNAPTDHGLCIKP 207 (256)
T ss_dssp EEEEEEEEECTTSSCEEEEEEEEETTEEEEESSTTCC-----CGGGEEEEECCTTEEEEEESSTHHHHCCSSSEEEEEEE
T ss_pred cceeEEEEecCCCCcceEEEEEEeCCEEEEEecCCCC-----ccccceEEEEcCCCEEEEecccccccCCCCCCEEEEEc
Confidence 35677766653 3456789999999999888755311 1111223457888888765532 23345544443
Q ss_pred cC----CCeEEEEEcCCHHHHHHHHHHHHHHHH
Q psy9950 566 RK----PNETFTLQSMSEDIKQAWTDELSNLLW 594 (732)
Q Consensus 566 ~~----~~~~~~L~A~S~eeK~~Wi~~I~~~i~ 594 (732)
.+ ....+.|.|.+++++..|+.+|+.+.-
T Consensus 208 ~k~~~~~~~~~~lcaede~~~~~W~~aIr~ak~ 240 (256)
T 3hk0_A 208 NKVRNETKELRLLCAEDEQTRTSWMTAFRLLKY 240 (256)
T ss_dssp TTCSSCCTTCEEEEESSHHHHHHHHHHHHHHHH
T ss_pred ccccCCCceEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 32 235799999999999999999998853
No 90
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=93.51 E-value=0.34 Score=44.37 Aligned_cols=97 Identities=16% Similarity=0.149 Sum_probs=63.2
Q ss_pred ccccccEEEEeCC-CCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecC------------CCCC
Q psy9950 491 LLRQNEFIVSQGK-GKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIG------------DSST 557 (732)
Q Consensus 491 ll~~g~l~v~~~~-~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~------------~~~~ 557 (732)
.+..|..+..... ++++.|++.|-+|..++-...+ +.... ..+..|++.+|.-..... ....
T Consensus 12 ~L~~Gt~l~K~~~~~~~k~r~f~l~~~~~~~w~~s~-~~~~~----~~~~~i~i~~I~eIr~G~~s~~~~~~~~~~~~~~ 86 (131)
T 1mai_A 12 ALLKGSQLLKVKSSSWRRERFYKLQEDCKTIWQESR-KVMRS----PESQLFSIEDIQEVRMGHRTEGLEKFARDIPEDR 86 (131)
T ss_dssp HHHHCEEEEEESSSSCEEEEEEEECTTSSEEEECCC-CTTCC----TTTTEEEGGGEEEEEESSCSHHHHHHCTTSCGGG
T ss_pred HHHcCCeEEEECCCCcceeEEEEECCCCCEEEeCCc-CCCCC----CcCcEEEHhhhHHHHCCCCCHHHHhhhhcCCccc
Confidence 4567777665544 3356788888888776644211 11011 124567787775443221 2356
Q ss_pred cEEEEEeecCCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q psy9950 558 KFEIWFRKRKPNETFTLQSMSEDIKQAWTDELSNLLW 594 (732)
Q Consensus 558 ~F~I~~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i~ 594 (732)
+|.|.+.. ..+++-|.|+|+++.+.|+..|+.++.
T Consensus 87 ~FsIiy~~--~~k~LdlvA~s~~e~~~Wv~gL~~L~~ 121 (131)
T 1mai_A 87 CFSIVFKD--QRNTLDLIAPSPADAQHWVQGLRKIIH 121 (131)
T ss_dssp EEEEEESS--SCCCEEEECSSHHHHHHHHHHHHHHHC
T ss_pred eEEEEECC--CCceEEEEeCCHHHHHHHHHHHHHHHH
Confidence 79998753 247999999999999999999998873
No 91
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.50 E-value=0.44 Score=43.29 Aligned_cols=100 Identities=15% Similarity=0.176 Sum_probs=57.9
Q ss_pred ccccccccEEEEeC-C-C-CeeEEEEEccCCe------EEEEEeeeCCCCCCCcceEEeeeeeecceE-EEEecCC-CCC
Q psy9950 489 GRLLRQNEFIVSQG-K-G-KKCLRHVFLFEEL------ILFSKARRFPDRKNLDLYIYKHSMKMSDIG-ITAQIGD-SST 557 (732)
Q Consensus 489 grll~~g~l~v~~~-~-~-kk~~r~vFLF~D~------LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~-v~e~~~~-~~~ 557 (732)
...+++|.+.+... + | |-+.++++||-+- |-+-.-+.... . .-.-+..|.|+|+. |.+...+ +.-
T Consensus 10 e~~vk~G~L~~q~q~~fgkKWrk~w~vLy~~S~~GvaRLE~yd~~ek~~-r---~~~~rrVIrLsdCisV~~~~~e~~~p 85 (127)
T 2d9w_A 10 DGAVKQGFLYLQQQQTFGKKWRRFGASLYGGSDCALARLELQEGPEKPR-R---CEAARKVIRLSDCLRVAEAGGEASSP 85 (127)
T ss_dssp CCSSEEEEEEECBCSSSSCBCCEEEEEEECCSSSSCCEEEEECCCSCSS-S---CSCCEEEECGGGEEEEEECCSCSSSC
T ss_pred CccccceEEEecccchhhhhhheeEEEEecCCCCCceeeeeeeccCccc-c---CCCCceEEEhhhCCeEecccCccCCC
Confidence 45678888887553 3 3 3456777777652 22222211100 0 11245789998875 4443333 111
Q ss_pred cEEEEEeecCCCeEEEEEcCCHHHHHHHHHHHHHHH
Q psy9950 558 KFEIWFRKRKPNETFTLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 558 ~F~I~~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i 593 (732)
+-...|....++++|.|.|.+. ++..|+.+|.++.
T Consensus 86 k~~~aF~l~T~er~~~laAe~~-E~~~Wi~~ic~~a 120 (127)
T 2d9w_A 86 RDTSAFFLETKERLYLLAAPAA-ERGDWVQAICLLA 120 (127)
T ss_dssp SSCEEEEEEESSCEEEEEECHH-HHHHHHHHHHHHH
T ss_pred CcceEEEEEeCCcEEEEEeCcH-HHHHHHHHHHHHh
Confidence 1112233346678999999975 8999999998863
No 92
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=91.46 E-value=1.3 Score=45.93 Aligned_cols=99 Identities=8% Similarity=0.030 Sum_probs=60.4
Q ss_pred cccccEEEEeC-CCCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecC-----CCCCcEEEEEee
Q psy9950 492 LRQNEFIVSQG-KGKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIG-----DSSTKFEIWFRK 565 (732)
Q Consensus 492 l~~g~l~v~~~-~~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~-----~~~~~F~I~~~~ 565 (732)
-.+|.+.+..+ +++-+.||++|=.+.|.+.++.+.+. .--+...+.|.++.|....+ ..+..|.+.+..
T Consensus 159 e~~G~L~~k~~~~k~WkkRyfvLr~sgLyy~~K~~sk~-----~r~l~~l~~L~~~~VY~~~~~kkk~kaPt~~~F~ik~ 233 (281)
T 4gmv_A 159 EIEGVLWLKDDGKKSWKKRYFLLRASGIYYVPKGKAKV-----SRDLVCFLQLDHVNVYYGQDYRNKYKAPTDYCLVLKH 233 (281)
T ss_dssp CCEEEEEEECTTSSCEEEEEEEECSSCEEEC--------------CCEEEECGGGCEEEEESSHHHHTCCSCSCEEEEEC
T ss_pred ccEEEEEEECCCCCCCeEEEEEEeCCEEEEEeCCCCCc-----cccceEEEEcCCcEEEEecccccccCCCCCcEEEEec
Confidence 36777777654 35667899999999998777653211 11112234677766665431 223344443333
Q ss_pred c----CCCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q psy9950 566 R----KPNETFTLQSMSEDIKQAWTDELSNLLWK 595 (732)
Q Consensus 566 ~----~~~~~~~L~A~S~eeK~~Wi~~I~~~i~~ 595 (732)
. .....+.|+|.+++++..|+.+|+-+...
T Consensus 234 ~~~~~~~~~~~~~caede~~~~~Wv~Air~ak~g 267 (281)
T 4gmv_A 234 PQIQKKSQYIKYLCCDDVRTLHQWVNGIRIAKYG 267 (281)
T ss_dssp TTCCSCCTTCEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred CccCCCCCceEEEEeCCHHHHHHHHHHHHHHhhC
Confidence 2 23468999999999999999999988644
No 93
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=90.72 E-value=0.64 Score=50.89 Aligned_cols=97 Identities=9% Similarity=0.058 Sum_probs=58.2
Q ss_pred cccccccEEEEeCC-CCeeEEEEEcc-CCeEEEEEeeeCCCCCCCcceEEeeeeeecc-----eEEEEecCCCCCcEEEE
Q psy9950 490 RLLRQNEFIVSQGK-GKKCLRHVFLF-EELILFSKARRFPDRKNLDLYIYKHSMKMSD-----IGITAQIGDSSTKFEIW 562 (732)
Q Consensus 490 rll~~g~l~v~~~~-~kk~~r~vFLF-~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~-----i~v~e~~~~~~~~F~I~ 562 (732)
.++++|.+....+. +.-+.|++.|- +..|++-|.+.. -..+..|++.. +.+.......++.|.|.
T Consensus 5 ~v~keG~L~K~g~~~k~Wk~r~fvL~~~~~l~yyk~~~~--------~~~~~~i~l~~~~~~~~~~~~~~~~~~~~f~I~ 76 (446)
T 4ejn_A 5 AIVKEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQ--------DVDQREAPLNNFSVAQCQLMKTERPRPNTFIIR 76 (446)
T ss_dssp CEEEEEEEEEEETTTTEEEEEEEEEETTSBEEEESSCC---------------CCCGGGBCTTCEEEEECSSSTTEEEEE
T ss_pred eEEEEeeEEeeccccccccceEEEEeeCCEEEEEecCCC--------CCccCcccccCccccceeecCCCCCCCceeEEE
Confidence 46778887766444 34456777775 577777765421 11233444444 33333333445688886
Q ss_pred EeecCCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q psy9950 563 FRKRKPNETFTLQSMSEDIKQAWTDELSNLLW 594 (732)
Q Consensus 563 ~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i~ 594 (732)
.......-...+.+.++++++.|+.+|+.++.
T Consensus 77 ~~~~~~~~~r~~~~~~~ee~e~W~~ai~~~i~ 108 (446)
T 4ejn_A 77 CLQWTTVIERTFHVETPEEREEWTTAIQTVAD 108 (446)
T ss_dssp EEETTEEEEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred cCCCceeeeeEEecCCHHHHHHHHHHHHhhhh
Confidence 43322222347999999999999999999864
No 94
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}
Probab=90.47 E-value=1.2 Score=41.97 Aligned_cols=83 Identities=16% Similarity=0.135 Sum_probs=57.2
Q ss_pred CeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecCCCCCcEEEEEee--cCCCeEEEEEcCCHHHH
Q psy9950 505 KKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGDSSTKFEIWFRK--RKPNETFTLQSMSEDIK 582 (732)
Q Consensus 505 kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~~~~~F~I~~~~--~~~~~~~~L~A~S~eeK 582 (732)
|.-.+|.|.|.|..|..-+.+. ... ......|.|..+.|+..+.-...+|.|-+.. ..+...+.|.|.++...
T Consensus 43 KgfKryWfv~kDt~LsyYKSkE-e~~----geP~~~inLrGCEVtPDVnva~~Kf~ikL~ip~~~gm~e~~LrcdsE~QY 117 (165)
T 4bbk_A 43 KACKQYWFVFKDTSIAYFKNKE-LEQ----GEPIEKLNLRGCEIVPDVNVSGRKFGIKLLIPVADGMNEVYLRCDHEDQY 117 (165)
T ss_dssp -CCEEEEEEEETTEEEEESSGG-GTT----SCCSEEEECTTCEEEEEEETTTTEEEEEEEEEETTEEEEEEEEESSHHHH
T ss_pred ccceeEEEEEeCCEEEEEcCHH-Hhc----CCCceEEecCccEEecccccccceeeEEEecCCCCcceeeeeecCCHHHH
Confidence 4456789999998876654331 111 2334567888999887665555666654433 23446899999999999
Q ss_pred HHHHHHHHHH
Q psy9950 583 QAWTDELSNL 592 (732)
Q Consensus 583 ~~Wi~~I~~~ 592 (732)
.+|+.+++-+
T Consensus 118 a~WMAAcrLA 127 (165)
T 4bbk_A 118 ARWMAACILA 127 (165)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHhhhc
Confidence 9999999776
No 95
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=89.03 E-value=1.6 Score=41.02 Aligned_cols=88 Identities=16% Similarity=0.162 Sum_probs=58.6
Q ss_pred cccccccEEEEeCCCCeeEEEEEccCCeEEEEE-eeeCCCCCCCcceEEeeeeeecceEEEEecCCCCCcEEEEEeecCC
Q psy9950 490 RLLRQNEFIVSQGKGKKCLRHVFLFEELILFSK-ARRFPDRKNLDLYIYKHSMKMSDIGITAQIGDSSTKFEIWFRKRKP 568 (732)
Q Consensus 490 rll~~g~l~v~~~~~kk~~r~vFLF~D~LL~~K-~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~~~~~F~I~~~~~~~ 568 (732)
.+|++|.+....|- ..+.|.++|-+--.||.- +. ....|+.|+++.-.-.+... ...|.|. .+
T Consensus 51 ~Ilk~G~v~KrkGl-~~kkR~liLT~~PrL~Yvdp~---------~~~~KGeIpls~~l~ve~k~--~~~F~I~----Tp 114 (151)
T 1w1g_A 51 LILKMGPVDKRKGL-FARRRQLLLTEGPHLYYVDPV---------NKVLKGEIPWSQELRPEAKN--FKTFFVH----TP 114 (151)
T ss_dssp CEEEEEEEEEEETT-EEEEEEEEEETTTEEEEEETT---------TTEEEEEECCCTTCEEEESS--SSEEEEE----ET
T ss_pred cEEEEEEEEecccC-cceeEEEEEcCCceEEEEcCc---------cccccceEecCCCeeEEEcC--CCEEEEE----CC
Confidence 34556765554443 356788888866666543 32 34788999997643233222 2356553 45
Q ss_pred CeEEEEEcCCHHHHHHHHHHHHHHHH
Q psy9950 569 NETFTLQSMSEDIKQAWTDELSNLLW 594 (732)
Q Consensus 569 ~~~~~L~A~S~eeK~~Wi~~I~~~i~ 594 (732)
.++|.|.+. ...+++|+++|++++.
T Consensus 115 ~RtY~~~d~-~~~AqeWv~aI~~~~~ 139 (151)
T 1w1g_A 115 NRTYYLMDP-SGNAHKWCRKIQEVWR 139 (151)
T ss_dssp TEEEEEECT-TSCHHHHHHHHHHHHH
T ss_pred CceEEEEcC-ccCHHHHHHHHHHHHH
Confidence 699999997 8889999999999873
No 96
>3hie_A Protein PSL1, exocyst complex component SEC3; PH domain, dimer, domain swapping, phosphate-binding, coiled coil, exocytosis; 2.00A {Saccharomyces cerevisiae}
Probab=88.30 E-value=2.8 Score=40.06 Aligned_cols=81 Identities=15% Similarity=0.155 Sum_probs=63.9
Q ss_pred CCeeEEEEEccCCe-----EEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecCCCCCcEEEEEeecCCCeEEEEEcCC
Q psy9950 504 GKKCLRHVFLFEEL-----ILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGDSSTKFEIWFRKRKPNETFTLQSMS 578 (732)
Q Consensus 504 ~kk~~r~vFLF~D~-----LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~~~~~F~I~~~~~~~~~~~~L~A~S 578 (732)
+.++.|++.|--.. +.+.|.|.. ....|..+....|.++...+.....+..|.+.+ ++.|..+|.+
T Consensus 62 ~~KK~R~L~lav~~~~sgrV~lhK~K~N----~ngsfsiGkTW~L~ELk~Ie~~~~~~~gF~ltl-----~K~Y~W~a~s 132 (171)
T 3hie_A 62 ENKKKRLLILSAKPNNAKLIQIHKAREN----SDGSFQIGRTWQLTELVRVEKDLEISEGFILTM-----SKKYYWETNS 132 (171)
T ss_dssp GGEEEEEEEEEECTTCTTCEEEEEEEEC----TTSCEEEEEEEEGGGCCEEEECSSCTTEEEEES-----SSEEEEECSS
T ss_pred CCccceEEEEEEecCCCceEEEEEEEEC----CCCcEEeeeeeecccceeeeccCCCCCcEEEEe-----CCeEEEecCC
Confidence 35788988885443 777887753 235799999999999999887555567788865 3699999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy9950 579 EDIKQAWTDELSNLL 593 (732)
Q Consensus 579 ~eeK~~Wi~~I~~~i 593 (732)
..||..++..|-++-
T Consensus 133 ~~Er~~FI~sL~K~y 147 (171)
T 3hie_A 133 AKERTVFIKSLITLY 147 (171)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999887764
No 97
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=86.98 E-value=0.61 Score=48.43 Aligned_cols=85 Identities=13% Similarity=0.040 Sum_probs=56.8
Q ss_pred eeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecCC--CCCcEEEEEeecCCCeEEEEEcCCHHHHH
Q psy9950 506 KCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGD--SSTKFEIWFRKRKPNETFTLQSMSEDIKQ 583 (732)
Q Consensus 506 k~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~--~~~~F~I~~~~~~~~~~~~L~A~S~eeK~ 583 (732)
-+.+||.|=.+.|+|-|..+... ......-+..|.|....+....+. ..+.|.|.. .....|.|+|.|.++.+
T Consensus 39 Wkk~w~VLkg~~L~fYKde~~~~--~~~~~~p~~~I~L~ga~v~~a~d~~kKk~vF~L~t---~~g~~yLFQA~s~eEm~ 113 (279)
T 3a8n_A 39 WKHYWVSLKGCTLFFYETDGRSG--IDHNSVPKHAVWVENSIVQAVPEHPKKDFVFCLSN---SLGDAFLFQTTSQTELE 113 (279)
T ss_dssp CEEEEEEEETTEECCBCCC----------CCCSSCCBCCSCEECCCTTSSSSCSCCCEEE---TTTEEEECCCSCHHHHH
T ss_pred CeEEEEEEeCCEEEEEecccccc--cccccCCCceEeccCcEEEeccccCCCCcEEEEEc---CCCCEEEEeCCCHHHHH
Confidence 35788889888888887653211 001123355688877776633332 235677653 45678999999999999
Q ss_pred HHHHHHHHHHHH
Q psy9950 584 AWTDELSNLLWK 595 (732)
Q Consensus 584 ~Wi~~I~~~i~~ 595 (732)
.|+.+|+.++..
T Consensus 114 ~WI~aI~~a~~~ 125 (279)
T 3a8n_A 114 NWITAIHSACAA 125 (279)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh
Confidence 999999999864
No 98
>3a58_A Exocyst complex component SEC3; protein complex, PH domain, GTPase, membrane traffic, coiled coil, exocytosis, phosphoprotein; HET: GNP; 2.60A {Saccharomyces cerevisiae}
Probab=86.42 E-value=3.6 Score=42.49 Aligned_cols=81 Identities=15% Similarity=0.155 Sum_probs=63.7
Q ss_pred CCeeEEEEEccCCe-----EEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecCCCCCcEEEEEeecCCCeEEEEEcCC
Q psy9950 504 GKKCLRHVFLFEEL-----ILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGDSSTKFEIWFRKRKPNETFTLQSMS 578 (732)
Q Consensus 504 ~kk~~r~vFLF~D~-----LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~~~~~F~I~~~~~~~~~~~~L~A~S 578 (732)
++++.|+++|--.. +.+.|.|.. ....|..+....|.++..++..-..+..|.|.+ ++.|..+|.+
T Consensus 132 kkKK~R~LcLaV~~d~sGRV~LhKaKeN----~ngsFsIGKTW~L~ELk~Id~~~~~~~gF~LTl-----~K~YyW~A~s 202 (320)
T 3a58_A 132 ENKKKRLLILSAKPNNAKLIQIHKAREN----SDGSFQIGRTWQLTELVRVEKDLEISEGFILTM-----SKKYYWETNS 202 (320)
T ss_dssp GGEEEEEEEEEECSSCTTCEEEEEEEEC----GGGCEEEEEEEEGGGCCEEEECSSCTTEEEEES-----SSEEEEEESS
T ss_pred cccCceEEEEEEecCCCceEEEEEEEec----CCCceEecceechhhhhhhhcccCCCCceEEEe-----CCceEEecCC
Confidence 46788988887665 778887752 246799999999999998885333346787765 3699999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy9950 579 EDIKQAWTDELSNLL 593 (732)
Q Consensus 579 ~eeK~~Wi~~I~~~i 593 (732)
..||..|+..|-++.
T Consensus 203 ~kER~~FI~sLvKiy 217 (320)
T 3a58_A 203 AKERTVFIKSLITLY 217 (320)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999987764
No 99
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A
Probab=85.50 E-value=4.4 Score=38.09 Aligned_cols=100 Identities=13% Similarity=0.212 Sum_probs=61.6
Q ss_pred CCCCCCCCcchHHHHHHHHHHHhHHHHHHHHhHHhhhhhhhhhhhhh---hhHHHHHHHHhhhhhcCCCCCCCchhHH--
Q psy9950 18 APGVTTGGSGLKDLARNLRQHLRGFSERLEDTRERLEDTSRCYYLLD---RAYEWALEAMKYISRVKPEDQTSIEPTV-- 92 (732)
Q Consensus 18 ~~~~~~~~~~~~~~~~~fk~~L~~F~~rle~~~~~Le~~~~l~~f~d---qa~~w~~e~~~~l~~~~~~~~~~~~~~~-- 92 (732)
-|+....++..+..+..+...-..+..++.+|+.+|+.+..++.|+. ....|+.+-+..+...... .+..+.
T Consensus 17 ~~k~~e~a~~I~~r~~~l~~rw~~L~~~a~~R~~~Le~s~~lq~F~~d~~el~~Wi~ek~~~a~~~~~~---d~~~v~~l 93 (161)
T 3lbx_A 17 GPKVLETAEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDADDLGKWIMEKVNILTDKSYE---DPTNIQGK 93 (161)
T ss_dssp -----CCSTTGGGHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC---SCCCHHHH
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcC---CHHHHHHH
Confidence 34444455666777778888888899999999999999999999954 4558999987766532222 223332
Q ss_pred -HHHHHHHhhCCCCChhhhHHHHHHHHhcC
Q psy9950 93 -KQLRQYLMAHPPLASEHFTEMIQLAKKLN 121 (732)
Q Consensus 93 -~~Lq~~~~~~~~~~~~~f~~~~~~a~~l~ 121 (732)
...+.|..+... ...+++.+...+..|-
T Consensus 94 l~kH~afe~El~a-~~~~~~~l~~~g~~Li 122 (161)
T 3lbx_A 94 YQKHQSLEAEVQT-KSRLMSELEKTREERF 122 (161)
T ss_dssp HHHHHHHHHHHHH-HHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 223333332110 2346777777676663
No 100
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.62 E-value=9.5 Score=34.65 Aligned_cols=95 Identities=15% Similarity=0.263 Sum_probs=57.7
Q ss_pred ccccccccccEEEEeCCCCeeEEEEE-ccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecCC--------CCC
Q psy9950 487 EQGRLLRQNEFIVSQGKGKKCLRHVF-LFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGD--------SST 557 (732)
Q Consensus 487 ~~grll~~g~l~v~~~~~kk~~r~vF-LF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~--------~~~ 557 (732)
.....|++|.+.-...+.+...||.+ |=...|-+-+.. ...+.| ..|+|.+|.-.+...+ .++
T Consensus 4 ~~s~vlkeGWmVH~t~~d~~rKRHYWrLD~K~Itlf~~e-----~~~k~y---keIpLseIL~v~~~~~~~~~~~~~~ph 75 (129)
T 2d9z_A 4 GSSGMVKEGWMVHYTSRDNLRKRHYWRLDSKCLTLFQNE-----SGSKYY---KEIPLSEILRISSPRDFTNISQGSNPH 75 (129)
T ss_dssp CCTTSEEEEEEEEEESSCCCCEEEEEEEESSCEEEESCS-----SCCSCC---CEECTTTCCEECCTTCCCCSSSCSCCC
T ss_pred CCCceeecceEEEEccCCccccceeeEecCCeEEEEecC-----CCCcee---ceeeHHHhcccccccCccccCCCCCCc
Confidence 34567888887655554333444444 444444444332 122233 3499999866655422 237
Q ss_pred cEEEEEeecCCCeEEEEEcC------------C---HHHHHHHHHHHHHHH
Q psy9950 558 KFEIWFRKRKPNETFTLQSM------------S---EDIKQAWTDELSNLL 593 (732)
Q Consensus 558 ~F~I~~~~~~~~~~~~L~A~------------S---~eeK~~Wi~~I~~~i 593 (732)
+|+|. ....+|.+.+. | .+.-+.|..+|+++|
T Consensus 76 cFEi~----T~~~~y~Vge~~~~~~~~~~~~~sg~g~~~a~~We~aIrqAL 122 (129)
T 2d9z_A 76 CFEII----TDTMVYFVGENNGDSSHNPVLAATGVGLDVAQSWEKAIRQAL 122 (129)
T ss_dssp SEEEE----CSSCEEEECBCCSCCSCCTTTTTTTCBHHHHHHHHHHHHHHH
T ss_pred eEEEE----ECCEEEEEccCCCCCCCCccccccccchHHHHHHHHHHHHhc
Confidence 89984 44567776652 2 799999999999987
No 101
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0
Probab=79.60 E-value=12 Score=34.47 Aligned_cols=57 Identities=18% Similarity=0.338 Sum_probs=45.8
Q ss_pred CCCcchHHHHHHHHHHHhHHHHHHHHhHHhhhhhhhhhhhh---hhhHHHHHHHHhhhhh
Q psy9950 23 TGGSGLKDLARNLRQHLRGFSERLEDTRERLEDTSRCYYLL---DRAYEWALEAMKYISR 79 (732)
Q Consensus 23 ~~~~~~~~~~~~fk~~L~~F~~rle~~~~~Le~~~~l~~f~---dqa~~w~~e~~~~l~~ 79 (732)
..++..+..+..+...-..+...+.+|+.+|+...+|+.|+ +..-.|+.+....+..
T Consensus 12 ~~a~~I~~r~~~l~~r~~~L~~~a~~R~~~Le~s~~l~~F~~d~~el~~Wi~ek~~~~~~ 71 (149)
T 3f31_A 12 ETAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQEKLQIASD 71 (149)
T ss_dssp -CTTHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 34566677788888888889999999999999999999995 4555899998876543
No 102
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=66.22 E-value=18 Score=32.74 Aligned_cols=94 Identities=18% Similarity=0.287 Sum_probs=56.2
Q ss_pred cccccccccEEEEeCCCCeeEEEEEccCC-eEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecCC--------CCCc
Q psy9950 488 QGRLLRQNEFIVSQGKGKKCLRHVFLFEE-LILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGD--------SSTK 558 (732)
Q Consensus 488 ~grll~~g~l~v~~~~~kk~~r~vFLF~D-~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~--------~~~~ 558 (732)
....|++|.+.-...+.+...||.|-.+. .|-+-+.- ...+.| ..|+|.+|.-++...+ .+++
T Consensus 5 ~s~vlkeGW~VH~t~~d~~rKRHYWrLD~K~Itlf~~e-----~~~~~y---keIpL~eIl~v~~~~~~~~l~~~~~~hc 76 (125)
T 2coa_A 5 SSGTLREGWVVHYSNKDTLRKRHYWRLDCKCITLFQNN-----TTNRYY---KEIPLSEILTVESAQNFSLVPPGTNPHC 76 (125)
T ss_dssp CCSCSEEEEEEECCSSSCCCEEEEEEECSSEEEEESSS-----SCSSCS---EEEETTTCCEEEESCCCSSSCTTSCCEE
T ss_pred CCceeecceEEEEccCCccccceeeEecCCeEEEEecC-----CCCcee---eeeehhHeecccccccccccCCCCCCce
Confidence 35678888876554443444566555544 44444322 222333 3499999876655432 3367
Q ss_pred EEEEEeecCCCeEEEEEcC-----------CHHHHHHHHHHHHHHH
Q psy9950 559 FEIWFRKRKPNETFTLQSM-----------SEDIKQAWTDELSNLL 593 (732)
Q Consensus 559 F~I~~~~~~~~~~~~L~A~-----------S~eeK~~Wi~~I~~~i 593 (732)
|+|. ....+|.+.+. ..+..+.|..+|+++|
T Consensus 77 FEi~----T~~~~yyVg~~~~~~p~~~sg~g~~~a~~W~~aIrqAL 118 (125)
T 2coa_A 77 FEIV----TANATYFVGEMPGGTPGGPSGQGAEAARGWETAIRQAL 118 (125)
T ss_dssp EEEE----CSSCCCCEECCSCCCSSSCCCCCSHHHHHHHHHHHHHG
T ss_pred EEEE----eCCeEEEEccCCCCCCCCcCccccHHHHHHHHHHHhhc
Confidence 8874 44556666652 1377999999999986
No 103
>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}
Probab=64.74 E-value=14 Score=36.67 Aligned_cols=95 Identities=17% Similarity=0.192 Sum_probs=56.4
Q ss_pred ccccccEEEEeCCCCeeEEEEEcc-----CCeEEEEEeeeCCCCCCCcceEEeeeeeecce-EEEEec--CCCCCcEEEE
Q psy9950 491 LLRQNEFIVSQGKGKKCLRHVFLF-----EELILFSKARRFPDRKNLDLYIYKHSMKMSDI-GITAQI--GDSSTKFEIW 562 (732)
Q Consensus 491 ll~~g~l~v~~~~~kk~~r~vFLF-----~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i-~v~e~~--~~~~~~F~I~ 562 (732)
.+++|.+.+.+++ |-+.|+++|= .|.+.+...|..++ ..+.-.-|..+.|.++ ++.... +...+...|.
T Consensus 9 ~v~eg~vk~r~~K-kWk~rw~vlrk~s~~adcl~L~vYkd~~d--r~k~~~~KaslsL~~~~GlE~g~~ldk~s~TlAII 85 (224)
T 3ml4_A 9 ALVEGQVKLRDGK-KWKSRWLVLRKPSPVADCLLMLVYKDKCE--RSKGLRERSSLTLEDICGLEPALPYEGLAHTLAII 85 (224)
T ss_dssp CSEEEEEEEC----CCEEEEEEEECSSTTSSCEEEEEESSSHH--HHSCCCCSEEEEECCEEEEEEEEEETTEEEEEEEE
T ss_pred eeEEEeeeeecCC-ceeeEEEEEEcCCCchheEEEEEEcChhh--hhcCCcccceeehHHhcCccccccccCcccEEEEE
Confidence 3667888887777 7788888874 46666655432111 1112234556777665 333322 2223334443
Q ss_pred EeecCCCeEEEEEcCCHHHHHHHHHHHHHH
Q psy9950 563 FRKRKPNETFTLQSMSEDIKQAWTDELSNL 592 (732)
Q Consensus 563 ~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~ 592 (732)
...++++|-|.+.+.-.+|...|+..
T Consensus 86 ----c~d~~~vLAFds~e~l~~W~~~l~~s 111 (224)
T 3ml4_A 86 ----CLSQAVMLGFDSHEAMCAWDTRIRYA 111 (224)
T ss_dssp ----ESSCEEEEECSSHHHHHHHHHHHHHH
T ss_pred ----ecCcEEEEEeCCHHHHHHHHHHHhhc
Confidence 34578899999999999999988764
No 104
>3ulb_A Target of rapamycin complex 2 subunit AVO1; PH domain, membrane localization, membrane protein; 1.90A {Saccharomyces cerevisiae} PDB: 3ulc_A
Probab=63.05 E-value=37 Score=30.44 Aligned_cols=57 Identities=16% Similarity=0.278 Sum_probs=43.3
Q ss_pred eeecceEEEEecCCCCCcEEEEEee--cCCCeEEEEEcCCHHHHHHHHHHHHHHHHHHH
Q psy9950 541 MKMSDIGITAQIGDSSTKFEIWFRK--RKPNETFTLQSMSEDIKQAWTDELSNLLWKQA 597 (732)
Q Consensus 541 i~l~~i~v~e~~~~~~~~F~I~~~~--~~~~~~~~L~A~S~eeK~~Wi~~I~~~i~~q~ 597 (732)
+.+++|.-.......+..|.|...+ ....+.|-|-|.|+++..+-+..|+..+....
T Consensus 59 ~H~s~Vv~~K~s~k~P~~FKivV~k~~~~e~KrYdfEA~s~~ea~EIV~~ik~~~~~Y~ 117 (121)
T 3ulb_A 59 LHISQVVLVKKSKRVPEHFKIFVRREGQDDIKRYYFEAVSGQECTEIVTRLQNLLSAYR 117 (121)
T ss_dssp EEGGGEEEEEECSSCTTEEEEEECCTTCSSCEEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeeEEEEEecccCCCcEEEEEEccCCCCcceeEEEeCCHHHHHHHHHHHHHHHHHhc
Confidence 4445554444556678889988766 34458999999999999999999999886543
No 105
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A
Probab=62.49 E-value=35 Score=32.53 Aligned_cols=54 Identities=13% Similarity=0.268 Sum_probs=42.6
Q ss_pred CcchHHHHHHHHHHHhHHHHHHHHhHHhhhhhhhhhhhhhhh---HHHHHHHHhhhh
Q psy9950 25 GSGLKDLARNLRQHLRGFSERLEDTRERLEDTSRCYYLLDRA---YEWALEAMKYIS 78 (732)
Q Consensus 25 ~~~~~~~~~~fk~~L~~F~~rle~~~~~Le~~~~l~~f~dqa---~~w~~e~~~~l~ 78 (732)
+...+..+..+...-..+....+.|+.+|+.+..++.|...+ ..|+.+....+.
T Consensus 74 ~~~i~~~~~~l~~~w~~L~~~~~~R~~~Le~~~~~~~f~~~~~e~~~Wl~~~e~~l~ 130 (213)
T 1cun_A 74 KEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVA 130 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 345566677777777788888899999999999999995554 799999876664
No 106
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Probab=56.14 E-value=42 Score=34.26 Aligned_cols=55 Identities=15% Similarity=0.303 Sum_probs=46.0
Q ss_pred CCcchHHHHHHHHHHHhHHHHHHHHhHHhhhhhhhhhhhhhh---hHHHHHHHHhhhh
Q psy9950 24 GGSGLKDLARNLRQHLRGFSERLEDTRERLEDTSRCYYLLDR---AYEWALEAMKYIS 78 (732)
Q Consensus 24 ~~~~~~~~~~~fk~~L~~F~~rle~~~~~Le~~~~l~~f~dq---a~~w~~e~~~~l~ 78 (732)
+....+..+..+...-+.+...++.++.+|+.+..++.|+.. +..|+.+....+.
T Consensus 182 ~~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~~~~~~~qf~~~~~~~~~Wl~~~e~~l~ 239 (322)
T 1u4q_A 182 GKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVA 239 (322)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 445667777888888888999999999999999999999766 6699999887775
No 107
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=52.59 E-value=67 Score=30.59 Aligned_cols=54 Identities=9% Similarity=-0.040 Sum_probs=43.6
Q ss_pred cchHHHHHHHHHHHhHHHHHHHHhHHhhhhhhhhhhhh---hhhHHHHHHHHhhhhh
Q psy9950 26 SGLKDLARNLRQHLRGFSERLEDTRERLEDTSRCYYLL---DRAYEWALEAMKYISR 79 (732)
Q Consensus 26 ~~~~~~~~~fk~~L~~F~~rle~~~~~Le~~~~l~~f~---dqa~~w~~e~~~~l~~ 79 (732)
...+..+..+...=..+....+.++.+|+.+..+..|. +++..|+.+.-.++..
T Consensus 76 ~~i~~~l~~L~~~w~~L~~~~~~r~~~L~~~l~l~~F~~~~~~~~~Wl~~~E~~l~~ 132 (214)
T 1s35_A 76 LLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQEFQKDAKQAEAILSNQEYTLAH 132 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 45666777777777888899999999999999999984 4566999888777764
No 108
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=51.51 E-value=39 Score=34.66 Aligned_cols=55 Identities=20% Similarity=0.350 Sum_probs=43.4
Q ss_pred CcchHHHHHHHHHHHhHHHHHHHHhHHhhhhhhhhhhhhh---hhHHHHHHHHhhhhh
Q psy9950 25 GSGLKDLARNLRQHLRGFSERLEDTRERLEDTSRCYYLLD---RAYEWALEAMKYISR 79 (732)
Q Consensus 25 ~~~~~~~~~~fk~~L~~F~~rle~~~~~Le~~~~l~~f~d---qa~~w~~e~~~~l~~ 79 (732)
....+..+..+...-+.+....+.|+.+|+.+..++.|.. ....|+.+....+..
T Consensus 78 ~~~i~~~l~~l~~~w~~L~~~~~~R~~~Le~~l~l~~f~~~~~~l~~Wl~~~e~~l~~ 135 (326)
T 3kbt_A 78 GEQIIRLQGQVDKHYAGLKDVAEERKRKLENMYHLFQLKRETDDLEQWISEKELVASS 135 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 3455666777888888889999999999999999999965 455898887776653
No 109
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Probab=49.63 E-value=27 Score=33.90 Aligned_cols=55 Identities=13% Similarity=0.195 Sum_probs=44.7
Q ss_pred CcchHHHHHHHHHHHhHHHHHHHHhHHhhhhhhhhhhh---hhhhHHHHHHHHhhhhh
Q psy9950 25 GSGLKDLARNLRQHLRGFSERLEDTRERLEDTSRCYYL---LDRAYEWALEAMKYISR 79 (732)
Q Consensus 25 ~~~~~~~~~~fk~~L~~F~~rle~~~~~Le~~~~l~~f---~dqa~~w~~e~~~~l~~ 79 (732)
....+..+..+...-+.+....+.++.+|+.+..++.| ++++..|+.++..++..
T Consensus 87 ~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~q~l~l~~F~~d~~~~~~WL~~~e~~L~~ 144 (218)
T 3fb2_A 87 SPEIKQKLDILDQERADLEKAWVQRRMMLDQCLELQLFHRDCEQAENWMAAREAFLNT 144 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 34566777888888888999999999999999999999 77888999988766654
No 110
>2adz_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus} SCOP: b.55.1.1
Probab=48.92 E-value=45 Score=31.96 Aligned_cols=53 Identities=9% Similarity=0.216 Sum_probs=39.0
Q ss_pred eeeeecceEEEEec---CCCCCcEEEEEeecCCCeEEEEEcCCHHHHHHHHHHHHHHH
Q psy9950 539 HSMKMSDIGITAQI---GDSSTKFEIWFRKRKPNETFTLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 539 ~~i~l~~i~v~e~~---~~~~~~F~I~~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i 593 (732)
..|||.=+-|+... +..++.|++.- ..+..+.+|+|++..+...|++.|...|
T Consensus 121 ~~IPLkMayvtR~~~~tD~e~r~fEv~s--~DG~~t~iLrc~D~a~a~~Wf~aI~sni 176 (178)
T 2adz_A 121 KHVSLKMAYVSRRCTPTDPEPRYLEICA--ADGQDAVFLRAKDEASARSWAGAIQAQI 176 (178)
T ss_dssp EEEETTTCEEEEECCSSCCSSCEEEEEE--TTTTEEEEECCSSHHHHHHHHHHHHHHH
T ss_pred eeecHHHHHHHHhccCCCCCccEEEEEc--CCCCeeEEEEeCCHHHHHHHHHHHHHhc
Confidence 34666555555442 22467788853 4667899999999999999999998765
No 111
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=46.78 E-value=77 Score=32.34 Aligned_cols=54 Identities=15% Similarity=0.308 Sum_probs=44.4
Q ss_pred cchHHHHHHHHHHHhHHHHHHHHhHHhhhhhhhhhhhhhhh---HHHHHHHHhhhhh
Q psy9950 26 SGLKDLARNLRQHLRGFSERLEDTRERLEDTSRCYYLLDRA---YEWALEAMKYISR 79 (732)
Q Consensus 26 ~~~~~~~~~fk~~L~~F~~rle~~~~~Le~~~~l~~f~dqa---~~w~~e~~~~l~~ 79 (732)
..++.....+...-+.+...++.++.+|+.+..++.|...+ ..|+.+....+..
T Consensus 188 ~~i~~~~~~l~~~W~~l~~~~~~r~~~L~~~~~~~~F~~~~~~l~~Wl~~~~~~l~~ 244 (323)
T 3edv_A 188 DDIQKRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQIEA 244 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 55667777777888889999999999999999999996554 5899988877764
No 112
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=45.61 E-value=1.5e+02 Score=29.03 Aligned_cols=54 Identities=19% Similarity=0.295 Sum_probs=41.8
Q ss_pred cchHHHHHHHHHHHhHHHHHHHHhHHhhhhhhhhh--------hhhhhh---HHHHHHHHhhhhh
Q psy9950 26 SGLKDLARNLRQHLRGFSERLEDTRERLEDTSRCY--------YLLDRA---YEWALEAMKYISR 79 (732)
Q Consensus 26 ~~~~~~~~~fk~~L~~F~~rle~~~~~Le~~~~l~--------~f~dqa---~~w~~e~~~~l~~ 79 (732)
.........+...-+.+...+..|+.+|+.+..++ .|...| ..|+.+....+..
T Consensus 90 ~~I~~r~~~l~~~W~~L~~~~~~R~~~L~~~l~~~~~~d~l~~qF~~~a~~~~~Wl~~~e~~l~~ 154 (250)
T 1quu_A 90 VNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQD 154 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcc
Confidence 44455567777777888889999999999999988 776554 5899888777654
No 113
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1
Probab=45.44 E-value=77 Score=30.21 Aligned_cols=55 Identities=18% Similarity=0.303 Sum_probs=43.7
Q ss_pred CCcchHHHHHHHHHHHhHHHHHHHHhHHhhhhhhhhhhh---hhhhHHHHHHHHhhhh
Q psy9950 24 GGSGLKDLARNLRQHLRGFSERLEDTRERLEDTSRCYYL---LDRAYEWALEAMKYIS 78 (732)
Q Consensus 24 ~~~~~~~~~~~fk~~L~~F~~rle~~~~~Le~~~~l~~f---~dqa~~w~~e~~~~l~ 78 (732)
.+...+..+..+...-..+...++.|+.+|+.+..++.| ++....|+.+....+.
T Consensus 76 ~~~~i~~~~~~l~~~w~~L~~~~~~R~~~Le~~~~l~qf~~~~~~~~~Wl~e~e~~~~ 133 (216)
T 1u5p_A 76 DTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEKKLLVS 133 (216)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhc
Confidence 345566667778888888888999999999999999999 5566799998765443
No 114
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=43.92 E-value=1e+02 Score=36.32 Aligned_cols=121 Identities=10% Similarity=0.100 Sum_probs=71.5
Q ss_pred CCcchHHHHHHHHHHHhHHHHHHHHhHHhhhhhhhhh--------hhhh---hhHHHHHHHHhhhhhcCCCCCCCchhHH
Q psy9950 24 GGSGLKDLARNLRQHLRGFSERLEDTRERLEDTSRCY--------YLLD---RAYEWALEAMKYISRVKPEDQTSIEPTV 92 (732)
Q Consensus 24 ~~~~~~~~~~~fk~~L~~F~~rle~~~~~Le~~~~l~--------~f~d---qa~~w~~e~~~~l~~~~~~~~~~~~~~~ 92 (732)
.++.....+..+...-+.+...+++|+.+|+.+..++ +|.. ++..|+.+....+..... +.....+.
T Consensus 444 ~~~~I~~~~~~l~~~W~~L~~~~~~R~~~L~~~l~~~q~~~~l~~~f~~~a~~~~~Wl~~~e~~l~~~~~--g~dl~~ve 521 (863)
T 1sjj_A 444 DSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFI--VHTIEEIQ 521 (863)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHCCCC--CSSSGGGH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHh--hccHHHHH
Confidence 3355566677777888888899999999999998888 5533 356999999888874321 23333333
Q ss_pred HHHHHHHhhCCCCCh--hhhHHHHHHHHhcC-------------C-------hhHHHHHHHHHHhhHHHHHHHHhh
Q psy9950 93 KQLRQYLMAHPPLAS--EHFTEMIQLAKKLN-------------N-------DKLIEQCKVAQCRCEETLEQIRSY 146 (732)
Q Consensus 93 ~~Lq~~~~~~~~~~~--~~f~~~~~~a~~l~-------------~-------~~~~~~~~~~~~~~~~~~~~~~~~ 146 (732)
..++.+..-...+.. ..+..+..++..+. + ..+.+.|..+...+.+-++.|+..
T Consensus 522 ~ll~kh~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~rw~~L~~~~~~R~~~L~~~ 597 (863)
T 1sjj_A 522 GLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEINGKWEHVRQLVPRRDQALMEE 597 (863)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCSCCSSSSCCHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333322222211 01322222222211 1 236778888888887777776653
No 115
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens}
Probab=42.10 E-value=97 Score=29.07 Aligned_cols=54 Identities=15% Similarity=0.278 Sum_probs=44.5
Q ss_pred cchHHHHHHHHHHHhHHHHHHHHhHHhhhhhhhhhhh---hhhhHHHHHHHHhhhhh
Q psy9950 26 SGLKDLARNLRQHLRGFSERLEDTRERLEDTSRCYYL---LDRAYEWALEAMKYISR 79 (732)
Q Consensus 26 ~~~~~~~~~fk~~L~~F~~rle~~~~~Le~~~~l~~f---~dqa~~w~~e~~~~l~~ 79 (732)
...+..+..+...-+.+....+.++.+|+....++.| ++++..|+.....+|..
T Consensus 79 ~~i~~~l~~L~~~w~~L~~~w~~r~~~L~~~l~l~~F~~d~~~~~~Wl~~~e~~L~~ 135 (185)
T 3lbx_B 79 EEIREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRDASVAEAWLIAQEPYLAS 135 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHhhhcc
Confidence 4566777788888888888899999999999999988 55677999988877764
No 116
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=40.89 E-value=80 Score=32.06 Aligned_cols=37 Identities=14% Similarity=0.316 Sum_probs=30.7
Q ss_pred CCCcEEEEEeecCCCeEEEEEcCCHHHHHHHHHHHHHHH
Q psy9950 555 SSTKFEIWFRKRKPNETFTLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 555 ~~~~F~I~~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i 593 (732)
.++.|++. ...+..+++|+|.+.++...|++.|..+|
T Consensus 225 ~~~~fev~--s~dG~~t~~l~~~d~~~a~~W~~ai~~~i 261 (263)
T 1z87_A 225 EPRYLEIC--AADGQDAVFLRAKDEASARSWAGAIQAQI 261 (263)
T ss_dssp SSCEEEEE--ETTTTEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCceEEEE--CCCCCeeEEEEECCHHHHHHHHHHHHHHh
Confidence 45677775 34567899999999999999999999876
No 117
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Probab=39.44 E-value=1.7e+02 Score=29.51 Aligned_cols=55 Identities=16% Similarity=0.264 Sum_probs=43.4
Q ss_pred CCcchHHHHHHHHHHHhHHHHHHHHhHHhhhhhhhhhhhhhhh---HHHHHHHHhhhh
Q psy9950 24 GGSGLKDLARNLRQHLRGFSERLEDTRERLEDTSRCYYLLDRA---YEWALEAMKYIS 78 (732)
Q Consensus 24 ~~~~~~~~~~~fk~~L~~F~~rle~~~~~Le~~~~l~~f~dqa---~~w~~e~~~~l~ 78 (732)
.+...+..+..+...-..+...++.|+.+|+.+..++.|+..+ ..|+.+....+.
T Consensus 76 ~~~~i~~~~~~l~~~w~~L~~~~~~R~~~Le~~~~l~~f~~~~~~~~~Wl~e~e~~~~ 133 (322)
T 1u4q_A 76 DTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEKKLLVS 133 (322)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3455667777888888888889999999999999999996654 479888765554
No 118
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=38.73 E-value=30 Score=31.60 Aligned_cols=36 Identities=14% Similarity=0.424 Sum_probs=27.7
Q ss_pred CCCcEEEEEeecCCCeEEEEEcCCHHHHHHHHHHHHHHH
Q psy9950 555 SSTKFEIWFRKRKPNETFTLQSMSEDIKQAWTDELSNLL 593 (732)
Q Consensus 555 ~~~~F~I~~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~~i 593 (732)
..+.|.+ +......|+|.|.++.+++.|+.+|+.++
T Consensus 94 ~~nTFVl---K~~n~~eyi~ea~d~~q~~sWla~Ir~C~ 129 (136)
T 1v5m_A 94 KDNTFVL---KVENGAEYILETIDSLQKHSWVADIQGCV 129 (136)
T ss_dssp CTTEECC---BCTTSCBEEEECSSHHHHHHHHHHHHHHH
T ss_pred ccceEEE---EecCCcEEEEEcCCHHHHHHHHHHHHhhc
Confidence 3445543 23445699999999999999999999886
No 119
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=37.19 E-value=4.5e+02 Score=28.73 Aligned_cols=68 Identities=13% Similarity=0.186 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhhhHHHHhCCHHHHHHHHHHHHHHHHHH
Q psy9950 298 KNLLFIMREMIQTERDYVKSLEYVILNYIPELTREDIPQALRGQRNVIFGNIEKIYEFHSQHFLGELEQ 366 (732)
Q Consensus 298 ~kRq~iI~ELi~TE~~YV~~L~~l~~~y~~pL~~~~~p~~l~~~~~~IF~NIe~I~~~Hs~~fL~~Le~ 366 (732)
+.....+.|=..-|++|.+.|..|...|.+.+....-...+..-...|...++.+-..| ..|...|..
T Consensus 39 ~el~~f~keRa~iE~eYAk~L~kLakk~~~~~~~~~e~gtl~~aw~~~~~e~e~~a~~H-~~~a~~L~~ 106 (486)
T 3haj_A 39 SDLMNCLHERARIEKAYAQQLTEWARRWRQLVEKGPQYGTVEKAWMAFMSEAERVSELH-LEVKASLMN 106 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCSHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 34556777888899999999999999987766543322334456777778888888889 688777744
No 120
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=33.93 E-value=1.2e+02 Score=33.20 Aligned_cols=68 Identities=7% Similarity=0.144 Sum_probs=53.3
Q ss_pred hhhhcHHHHhcCCCCCCCCCCCcchHHHHHHHHHHHhHHHHHHHHhHHhhhhhhhhhhhhh---hhHHHHHHHHhhhhh
Q psy9950 4 DKAGDLLEECGGSSAPGVTTGGSGLKDLARNLRQHLRGFSERLEDTRERLEDTSRCYYLLD---RAYEWALEAMKYISR 79 (732)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fk~~L~~F~~rle~~~~~Le~~~~l~~f~d---qa~~w~~e~~~~l~~ 79 (732)
+.|.+|+++-+ | ++...+.....+++.-..+...++.++.+|+.+..++.|+. .+..|+.+-..++..
T Consensus 154 ~~G~~Li~~~H----p----as~~I~~r~~~L~~~W~~L~~l~~~R~~~L~~a~~~~QF~~Da~EaesWL~eke~~l~s 224 (450)
T 3r6n_A 154 QESDQLVLNQH----P----ASDKIEAYMDTLQTQWSWILQITKCIDVHLKENAAYFQFFEEAQSTEAYLKGLQDSIRK 224 (450)
T ss_dssp HHHHHHHHTTC----T----THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCC----C----CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhcc
Confidence 45677766653 3 55667777888888888888999999999999999999954 566999887777753
No 121
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=30.15 E-value=37 Score=33.48 Aligned_cols=33 Identities=15% Similarity=0.274 Sum_probs=26.8
Q ss_pred CCCcEEEEEeecCCCeEEEEEcCCHHHHHHHHHHHHH
Q psy9950 555 SSTKFEIWFRKRKPNETFTLQSMSEDIKQAWTDELSN 591 (732)
Q Consensus 555 ~~~~F~I~~~~~~~~~~~~L~A~S~eeK~~Wi~~I~~ 591 (732)
....|.|. .....|.|+|.|++++..|+.+|++
T Consensus 194 ~~~~f~ii----t~~r~~~~~a~s~~e~~~Wi~~lq~ 226 (228)
T 3tfm_A 194 RPNSFVII----TANRVLHCNADTPEEMHHWITLLQR 226 (228)
T ss_dssp CTTEEEEE----ETTEEEEEECSSHHHHHHHHHHHCS
T ss_pred CCCcEEEE----eCCceEEEEcCCHHHHHHHHHHHhh
Confidence 34567764 4568999999999999999999865
No 122
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=29.57 E-value=85 Score=30.19 Aligned_cols=53 Identities=8% Similarity=0.023 Sum_probs=39.5
Q ss_pred cchHHHHHHHHHHHhHHHHHHHHhHHhhhhhhhhhhh---hhhhHHHHHHHHhhhh
Q psy9950 26 SGLKDLARNLRQHLRGFSERLEDTRERLEDTSRCYYL---LDRAYEWALEAMKYIS 78 (732)
Q Consensus 26 ~~~~~~~~~fk~~L~~F~~rle~~~~~Le~~~~l~~f---~dqa~~w~~e~~~~l~ 78 (732)
...+.....+...=..+...++.++..|+.+..++.| ++....|+.+-...++
T Consensus 77 ~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~~~~F~~~~~e~~~Wl~ek~~~l~ 132 (218)
T 3edu_A 77 ATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKHRELP 132 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 4455555566666667788889999999999989998 4556689988766653
No 123
>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A
Probab=28.98 E-value=4.2e+02 Score=31.07 Aligned_cols=91 Identities=11% Similarity=0.195 Sum_probs=55.1
Q ss_pred ccccccEEEEeCC---CCeeEEEEEccCCeEEEEEeeeCCCCCCCcceEEeeeeeecceEEEEecCC---CCCcEEEEEe
Q psy9950 491 LLRQNEFIVSQGK---GKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSDIGITAQIGD---SSTKFEIWFR 564 (732)
Q Consensus 491 ll~~g~l~v~~~~---~kk~~r~vFLF~D~LL~~K~kk~~~~~~~~~y~~K~~i~l~~i~v~e~~~~---~~~~F~I~~~ 564 (732)
.++.|++.+.... |..+++++.|=.+-|---|--. ... .|..+++..+++.+...+ ....|.++-.
T Consensus 540 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (772)
T 3zvr_A 540 VIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDE----EKE----KKYMLSVDNLKLRDVEKGFMSSKHIFALFNT 611 (772)
T ss_dssp EEEEEEEEESSSCCC---CCEEEEEEESSEEEEESSTT----CCC----EEEEEECTTEEEEEC-------CEEEEEEET
T ss_pred ceeeeeeeecccccccCCCccceeeccccccccccchh----hhc----ccccccccccccchhhhccccccccccccCC
Confidence 5778888875433 4556777777776665433210 111 344677788887765322 2345666432
Q ss_pred ecC----CCeEEEEEcCCHHHHHHHHHHH
Q psy9950 565 KRK----PNETFTLQSMSEDIKQAWTDEL 589 (732)
Q Consensus 565 ~~~----~~~~~~L~A~S~eeK~~Wi~~I 589 (732)
... .-+.+.|.|.+.++.+.|...+
T Consensus 612 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 640 (772)
T 3zvr_A 612 EQRNVYKDYRQLELACETQEEVDSWKASF 640 (772)
T ss_dssp TSSCSBTTBSEEEEEESSHHHHHHHHHHH
T ss_pred ccccccchhhhhhhhccccccchhhHHhh
Confidence 222 1258999999999999999887
No 124
>2kbt_A Chimera of proto-oncogene VAV, linker, immunoglobulin G-binding protein G; sortase, protein ligation, intein, inset, solubility enhancement; NMR {Mus musculus}
Probab=28.42 E-value=12 Score=34.44 Aligned_cols=28 Identities=7% Similarity=0.036 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy9950 296 TQKNLLFIMREMIQTERDYVKSLEYVIL 323 (732)
Q Consensus 296 ~~~kRq~iI~ELi~TE~~YV~~L~~l~~ 323 (732)
.+..|+.++.++++||++|++.|+.+..
T Consensus 103 ~~~~r~~v~~~~~~~E~~y~~~~~~~~~ 130 (142)
T 2kbt_A 103 EKVFKQYANDNGVDGEWTYDDATKTFTV 130 (142)
T ss_dssp ----------------------------
T ss_pred HHHHHHHhhhcCccchhhHHHHHhhccc
Confidence 3467899999999999999999998875
No 125
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=27.21 E-value=91 Score=31.75 Aligned_cols=53 Identities=8% Similarity=0.063 Sum_probs=41.3
Q ss_pred cchHHHHHHHHHHHhHHHHHHHHhHHhhhhhhhhhhhh---hhhHHHHHHHHhhhh
Q psy9950 26 SGLKDLARNLRQHLRGFSERLEDTRERLEDTSRCYYLL---DRAYEWALEAMKYIS 78 (732)
Q Consensus 26 ~~~~~~~~~fk~~L~~F~~rle~~~~~Le~~~~l~~f~---dqa~~w~~e~~~~l~ 78 (732)
...+.....+...-..+...++.++..|+.+..++.|. +....|+.+....+.
T Consensus 186 ~~i~~~~~~l~~~W~~l~~~~~~r~~~L~~a~~~~~f~~~~~e~~~Wl~ek~~~L~ 241 (326)
T 3kbt_A 186 ATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKHRELP 241 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCc
Confidence 44566677777778888999999999999999999985 556689988876664
No 126
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=26.87 E-value=1.8e+02 Score=29.50 Aligned_cols=54 Identities=7% Similarity=0.118 Sum_probs=39.8
Q ss_pred CCcchHHHHHHHHHHHhHHHHHHHHhHHhhhhhhhhhhhhhh---hHHHHHHHHhhh
Q psy9950 24 GGSGLKDLARNLRQHLRGFSERLEDTRERLEDTSRCYYLLDR---AYEWALEAMKYI 77 (732)
Q Consensus 24 ~~~~~~~~~~~fk~~L~~F~~rle~~~~~Le~~~~l~~f~dq---a~~w~~e~~~~l 77 (732)
.+...+.....+...=..+...+..|+..|+.+..++.|... ...|+.+-...+
T Consensus 80 ~~~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~~~~f~~~~~e~~~Wl~~k~~~l 136 (323)
T 3edv_A 80 DAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEIFGRIQDKHKKL 136 (323)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 334556666667777778888899999999999989888554 457888765544
No 127
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}
Probab=22.43 E-value=4e+02 Score=25.30 Aligned_cols=89 Identities=10% Similarity=0.103 Sum_probs=48.7
Q ss_pred hHHHHHHHHHHHhHHHHHHHHhHHhhhhhhhhhhhhhh---hHHHHHHHHhhhhhcCCCCCC-CchhHHHHHHHHHhhCC
Q psy9950 28 LKDLARNLRQHLRGFSERLEDTRERLEDTSRCYYLLDR---AYEWALEAMKYISRVKPEDQT-SIEPTVKQLRQYLMAHP 103 (732)
Q Consensus 28 ~~~~~~~fk~~L~~F~~rle~~~~~Le~~~~l~~f~dq---a~~w~~e~~~~l~~~~~~~~~-~~~~~~~~Lq~~~~~~~ 103 (732)
++..+..+...-.....-++.|+.+|+ .||.|+.. .-.|+.+....+.....++.. .........+.+.....
T Consensus 79 i~~rl~~l~~~~~~L~~~a~~R~~~L~---~L~~f~~~~~~~~~Wl~eke~~~~s~d~g~~~~~v~~l~~k~~~f~~el~ 155 (210)
T 3pdy_A 79 YRDCLGRLDLQYAKLLNSSKARLRSLE---SLHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELE 155 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHSCCSTTSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHccccCCCchhHHHHHHHHHHHHHHHH
Confidence 344444555555566667777888898 67788554 457998887777643322221 11122223333332211
Q ss_pred CCChhhhHHHHHHHHhc
Q psy9950 104 PLASEHFTEMIQLAKKL 120 (732)
Q Consensus 104 ~~~~~~f~~~~~~a~~l 120 (732)
. -..++..+.+.|..|
T Consensus 156 ~-~~~~v~~l~~~~~~L 171 (210)
T 3pdy_A 156 L-KEKKIKELQNAGDRL 171 (210)
T ss_dssp H-HHHHHHHHHHHHHHH
T ss_pred H-hHHHHHHHHHHHHHH
Confidence 0 234677777777666
No 128
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}
Probab=22.22 E-value=1.4e+02 Score=30.44 Aligned_cols=48 Identities=6% Similarity=0.045 Sum_probs=38.6
Q ss_pred CCcchHHHHHHHHHHHhHHHHHHHHhHHhhhhhhhhhhhhhh---hHHHHH
Q psy9950 24 GGSGLKDLARNLRQHLRGFSERLEDTRERLEDTSRCYYLLDR---AYEWAL 71 (732)
Q Consensus 24 ~~~~~~~~~~~fk~~L~~F~~rle~~~~~Le~~~~l~~f~dq---a~~w~~ 71 (732)
++...+.....+...-..+....+.++..|+.+..+++|+.. +..|+.
T Consensus 81 ~~~~I~~r~~~L~~~W~~L~~l~~~R~~~L~~a~~~~qF~~da~e~e~Wl~ 131 (283)
T 3pe0_A 81 ARPTVESFQAALQTQWSWMLQLCCCIEAHLKENAAYFQFFSDVREAEGQLQ 131 (283)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456667777778888888888899999999999999999665 447765
No 129
>3abh_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.00A {Homo sapiens} PDB: 3q0k_A 3lll_A 3hah_A 3qni_A 3hai_A 3q84_A
Probab=22.21 E-value=6.1e+02 Score=25.47 Aligned_cols=69 Identities=13% Similarity=0.166 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhhhHHHHhCCHHHHHHHHHHHHHHHHHHHh
Q psy9950 299 NLLFIMREMIQTERDYVKSLEYVILNYIPELTREDIPQALRGQRNVIFGNIEKIYEFHSQHFLGELEQCA 368 (732)
Q Consensus 299 kRq~iI~ELi~TE~~YV~~L~~l~~~y~~pL~~~~~p~~l~~~~~~IF~NIe~I~~~Hs~~fL~~Le~~~ 368 (732)
.....+.|=..-|++|.+.|..|...|...+....-...+..-...|...++.+-..| ..|-..|..-+
T Consensus 47 el~~f~keRa~iE~eYak~L~kLakk~~~~~~~~~e~gtl~~aw~~i~~e~e~~a~~H-~~~a~~L~~~v 115 (312)
T 3abh_A 47 DLMNCLHERARIEKAYAQQLTEWARRWRQLVEKGPQYGTVEKAWMAFMSEAERVSELH-LEVKASLMNDD 115 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 3455667777889999999999999987655322222334455778888889999999 68877776543
No 130
>3aco_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.70A {Homo sapiens}
Probab=21.89 E-value=6.6e+02 Score=25.78 Aligned_cols=67 Identities=13% Similarity=0.189 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhhhHHHHhCCHHHHHHHHHHHHHHHHHH
Q psy9950 299 NLLFIMREMIQTERDYVKSLEYVILNYIPELTREDIPQALRGQRNVIFGNIEKIYEFHSQHFLGELEQ 366 (732)
Q Consensus 299 kRq~iI~ELi~TE~~YV~~L~~l~~~y~~pL~~~~~p~~l~~~~~~IF~NIe~I~~~Hs~~fL~~Le~ 366 (732)
.....+.|=..-|++|.+.|..|...|...+....-...+..-...|...++.+-..| ..|-..|..
T Consensus 47 el~~f~keRa~IE~eYak~L~kLakk~~~~~~~~~e~gtl~~aw~~l~~e~e~~a~~H-~~la~~L~~ 113 (350)
T 3aco_A 47 DLMNCLHERARIEKAYAQQLTEWARRWRQLVEKGPQYGTVEKAWMAFMSEAERVSELH-LEVKASLMN 113 (350)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 3455667777889999999999999988755332222334455677888888899999 688777765
No 131
>3i2w_A Syndapin, LD46328P; EFC, FBAR, SH3 domain, endocytosis; 2.67A {Drosophila melanogaster}
Probab=21.30 E-value=3.4e+02 Score=27.17 Aligned_cols=69 Identities=16% Similarity=0.172 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhhhHHHHhCCHHHHHHHHHHHHHHHHHHH
Q psy9950 298 KNLLFIMREMIQTERDYVKSLEYVILNYIPELTREDIPQALRGQRNVIFGNIEKIYEFHSQHFLGELEQC 367 (732)
Q Consensus 298 ~kRq~iI~ELi~TE~~YV~~L~~l~~~y~~pL~~~~~p~~l~~~~~~IF~NIe~I~~~Hs~~fL~~Le~~ 367 (732)
+.....+.|=..-|++|.+.|..|...|.+.+....-...+..-...|...++.+-..| ..|...|..-
T Consensus 25 ~el~~f~keRa~iE~~Yak~L~kL~~~~~~~~~~~~~~gs~~~aw~~~~~~~e~~a~~h-~~~a~~l~~~ 93 (290)
T 3i2w_A 25 NDLQQLIQERADIEKGYAKSLRTWSKKWGELIEKGPEYGTTEAAWKGVLTESERISDVH-MKIKDNLCND 93 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 34566777888889999999999999998766443323334455677777788888888 6887777554
No 132
>2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4
Probab=20.62 E-value=5.3e+02 Score=25.59 Aligned_cols=67 Identities=13% Similarity=0.156 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCCc--hhhhhhHHHHhCCHHHHHHHHHHHHHHHHHH
Q psy9950 299 NLLFIMREMIQTERDYVKSLEYVILNYIPELTR-EDIP--QALRGQRNVIFGNIEKIYEFHSQHFLGELEQ 366 (732)
Q Consensus 299 kRq~iI~ELi~TE~~YV~~L~~l~~~y~~pL~~-~~~p--~~l~~~~~~IF~NIe~I~~~Hs~~fL~~Le~ 366 (732)
.....+.|-..-|++|.+.|..|...|...... ...| ..+..-...|...++.+-..| ..|-..|..
T Consensus 32 el~~f~~eRa~iE~eYak~L~kLa~~~~~~~~~~~~~~~~~t~~~aw~~~~~~~e~~a~~h-~~~a~~l~~ 101 (305)
T 2efl_A 32 KYIKFVKERTEIELSYAKQLRNLSKKYQPKKNSKEEEEYKYTSCKAFISNLNEMNDYAGQH-EVISENMAS 101 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSCC-------CTTSHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCccccccccHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 345566777888999999999999988654311 1111 122345667777778888888 677766643
No 133
>3m3w_A Pacsin3, protein kinase C and casein kinase II substrate P; mouse, BAR domain, endocytosis; 2.60A {Mus musculus} PDB: 3syv_A 3qe6_A
Probab=20.54 E-value=5.2e+02 Score=26.44 Aligned_cols=70 Identities=16% Similarity=0.203 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhhhHHHHhCCHHHHHHHHHHHHHHHHHHHh
Q psy9950 298 KNLLFIMREMIQTERDYVKSLEYVILNYIPELTREDIPQALRGQRNVIFGNIEKIYEFHSQHFLGELEQCA 368 (732)
Q Consensus 298 ~kRq~iI~ELi~TE~~YV~~L~~l~~~y~~pL~~~~~p~~l~~~~~~IF~NIe~I~~~Hs~~fL~~Le~~~ 368 (732)
......+.|=..-|++|.+.|..|...|...+....-...+..-...|..-++.+-..| ..|-..|..-.
T Consensus 37 ~el~~f~keRa~iE~~Yak~L~kLakk~~~~~~~~~e~gsl~~aw~~i~~e~e~~a~~H-~~~a~~l~~~v 106 (320)
T 3m3w_A 37 GDLVSCFQERARIEKAYAQQLADWARKWRGAVEKGPQYGTLEKAWHAFFTAAERLSELH-LEVREKLHGPD 106 (320)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCChHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 34456667777889999999999999887765433333344556777778888999999 68877776543
No 134
>2v0o_A FCHO2, FCH domain only protein 2; lipid-binding protein, EFC domain, vesicle trafficking, membrane curvature, endocytosis, exocytosis, F-BAR domain; 2.30A {Homo sapiens}
Probab=20.04 E-value=6.2e+02 Score=24.71 Aligned_cols=63 Identities=17% Similarity=0.182 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhhhHHHHhCCHHHHHHHHHHHHHHHHHH
Q psy9950 299 NLLFIMREMIQTERDYVKSLEYVILNYIPELTREDIPQALRGQRNVIFGNIEKIYEFHSQHFLGELEQ 366 (732)
Q Consensus 299 kRq~iI~ELi~TE~~YV~~L~~l~~~y~~pL~~~~~p~~l~~~~~~IF~NIe~I~~~Hs~~fL~~Le~ 366 (732)
.....+.|=..-|++|.+.|..|...|... ..+..+..-...|...++.+-..| ..|-..|..
T Consensus 36 el~~f~~eRa~iE~eYak~L~kLa~~~~~~----~~~gs~~~~w~~~~~~~e~~a~~h-~~~a~~l~~ 98 (276)
T 2v0o_A 36 ELADFVRERATIEEAYSRSMTKLAKSASNY----SQLGTFAPVWDVFKTSTEKLANCH-LDLVRKLQE 98 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTS----CCCSSSGGGHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCC----CCcchHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 445667777888999999999999988652 112222334566667778888888 577777743
Done!