RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9950
(732 letters)
>d1ntya1 a.87.1.1 (A:1231-1414) Triple functional domain protein
TRIO {Human (Homo sapiens) [TaxId: 9606]}
Length = 184
Score = 150 bits (380), Expect = 1e-42
Identities = 70/179 (39%), Positives = 106/179 (59%), Gaps = 2/179 (1%)
Query: 302 FIMREMIQTERDYVKSLEYVILNYIPELTR--EDIPQALRGQRNVIFGNIEKIYEFHSQH 359
FIM E+IQTE+ YV+ L + Y+ E+T E+IP + + +IFGN+++IYEFH+
Sbjct: 6 FIMAELIQTEKAYVRDLRECMDTYLWEMTSGVEEIPPGIVNKELIIFGNMQEIYEFHNNI 65
Query: 360 FLGELEQCANLPLSVGQCFLNHENKFYLYALYNKNKPKSDALMTEYGSSFFKAKQLELAD 419
FL ELE+ LP VG CF+ +KF +Y Y KNKP S L+ E+ S+F Q
Sbjct: 66 FLKELEKYEQLPEDVGHCFVTWADKFQMYVTYCKNKPDSTQLILEHAGSYFDEIQQRHGL 125
Query: 420 RMDLASYLLKPVQRMGKYALLLQQLMKASRQDVKDIKEAESMVRFQLRHGNDLLAMDSL 478
++SYL+KPVQR+ KY LLL++L+ + +IK+ ++ + ND + + L
Sbjct: 126 ANSISSYLIKPVQRITKYQLLLKELLTCCEEGKGEIKDGLEVMLSVPKRANDAMHLSML 184
>d1kz7a1 a.87.1.1 (A:624-818) Dbl's big sister, Dbs {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 195
Score = 140 bits (353), Expect = 8e-39
Identities = 70/183 (38%), Positives = 112/183 (61%), Gaps = 7/183 (3%)
Query: 302 FIMREMIQTERDYVKSLEYVILNYIPEL----TREDIPQALRGQRNVIFGNIEKIYEFHS 357
+M E++ TER YV+ L V+ Y E+ I L+ ++N++FGN+E+IY FH+
Sbjct: 12 HVMNELLDTERAYVEELLCVLEGYAAEMDNPLMAHLISTGLQNKKNILFGNMEEIYHFHN 71
Query: 358 QHFLGELEQCANLPLSVGQCFLNHENKFYLYALYNKNKPKSDALMTEYGSS-FFKAKQLE 416
+ FL ELE C + P VG+CFL +F +Y Y +NKP+S++L + FF+ Q +
Sbjct: 72 RIFLRELESCIDCPELVGRCFLERMEEFQIYEKYCQNKPRSESLWRQCSDCPFFQECQKK 131
Query: 417 LADRMDLASYLLKPVQRMGKYALLLQQLMKASRQ--DVKDIKEAESMVRFQLRHGNDLLA 474
L ++ L SYLLKPVQR+ KY LLL++++K S+ +D++EA S + L+ ND +
Sbjct: 132 LDHKLSLDSYLLKPVQRITKYQLLLKEMLKYSKHCEGAEDLQEALSSILGILKAVNDSMH 191
Query: 475 MDS 477
+ +
Sbjct: 192 LIA 194
>d1by1a_ a.87.1.1 (A:) beta-pix {Human (Homo sapiens) [TaxId: 9606]}
Length = 209
Score = 122 bits (308), Expect = 1e-32
Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 13/180 (7%)
Query: 303 IMREMIQTERDYVKSLEYVILNYIPELTREDIPQALRGQRNVIFGNIEKIYEFHSQHFLG 362
+++ +++TE +Y K L+ V+ Y+ L + + + GN+E+I F Q +
Sbjct: 17 VLQNILETENEYSKELQTVLSTYLRPLQTSEKLS--SANISYLMGNLEEICSFQ-QMLVQ 73
Query: 363 ELEQCANLPLS---VGQCFLNH-ENKFYLYALYNKNKPKSDALMTEYGSSF---FKAKQL 415
LE+C LP + VG CFLN LY Y N P + ++TE+ + K
Sbjct: 74 SLEECTKLPEAQQRVGGCFLNLMPQMKTLYLTYCANHPSAVNVLTEHSEELGEFMETKGA 133
Query: 416 ELADRMDLASYLLKPVQRMGKYALLLQQLMK---ASRQDVKDIKEAESMVRFQLRHGNDL 472
+ L + L KP R+ KY LL++L + D +DI+++ + + ++
Sbjct: 134 SSPGILVLTTGLSKPFMRLDKYPTLLKELERHMEDYHTDRQDIQKSMAAFKNLSAQCQEV 193
>d1foea1 a.87.1.1 (A:1034-1239) GEF of TIAM1 (T-Lymphoma invasion
and metastasis inducing protein 1) {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 206
Score = 116 bits (292), Expect = 2e-30
Identities = 50/194 (25%), Positives = 90/194 (46%), Gaps = 27/194 (13%)
Query: 303 IMREMIQTERDYVKSLEYVILNYIPELTREDIPQALRGQRNVIFGNIEKIYEFHSQHFLG 362
++ E+++TER YVK L ++ Y+ L +E + + +V+FGN+ ++ EF FL
Sbjct: 11 VICELLETERTYVKDLNCLMERYLKPLQKETFLT--QDELDVLFGNLTEMVEFQ-VEFLK 67
Query: 363 ELEQCANL----------------PLSVGQCFLNHENKFYLYALYNKNKPKSDALMTEYG 406
LE L S+G FL + ++F LY+ + + K ++ +
Sbjct: 68 TLEDGVRLVPDLEKLEKVDQFKKVLFSLGGSFLYYADRFKLYSAFCASHTKVPKVLVKAK 127
Query: 407 S-----SFFKAKQLELADRMDLASYLLKPVQRMGKYALLLQQLMK---ASRQDVKDIKEA 458
+ +F A+ L SYL+KP+QR+ KY LLL++L A ++ + A
Sbjct: 128 TDTAFKAFLDAQNPRQQHSSTLESYLIKPIQRVLKYPLLLRELFALTDAESEEHYHLDVA 187
Query: 459 ESMVRFQLRHGNDL 472
+ H N++
Sbjct: 188 IKTMNKVASHINEM 201
>d1f5xa_ a.87.1.1 (A:) RhoGEF Vav {Mouse (Mus musculus) [TaxId:
10090]}
Length = 208
Score = 113 bits (284), Expect = 3e-29
Identities = 46/181 (25%), Positives = 86/181 (47%), Gaps = 16/181 (8%)
Query: 302 FIMREMIQTERDYVKSLEYVILNYIPELTREDIPQALRGQRNVIFGNIEKIYEFHSQHFL 361
+RE+ QTE Y +L + +++ L R PQ + IF NIE+++ H HFL
Sbjct: 30 CCLREIQQTEEKYTDTLGSIQQHFMKPLQRFLKPQDME----TIFVNIEELFSVH-THFL 84
Query: 362 GELEQCANLP--LSVGQCFLNHENKFYLYALYNKNKPKSDALMTEYGSS-------FFKA 412
EL+ P ++ Q F+ ++ +F +Y Y + + + ++ +
Sbjct: 85 KELKDALAGPGATTLYQVFIKYKERFLVYGRYCSQVESASKHLDQVATAREDVQMKLEEC 144
Query: 413 KQLELADRMDLASYLLKPVQRMGKYALLLQQLMKASRQ--DVKDIKEAESMVRFQLRHGN 470
Q R L L+ P+QR+ KY LLLQ+L+K ++ + ++++ A +R + N
Sbjct: 145 SQRANNGRFTLRDLLMVPMQRVLKYHLLLQELVKHTQDATEKENLRLALDAMRDLAQCVN 204
Query: 471 D 471
+
Sbjct: 205 E 205
>d1kz7a2 b.55.1.1 (A:819-965) Dbl's big sister, Dbs {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 147
Score = 110 bits (277), Expect = 5e-29
Identities = 41/144 (28%), Positives = 61/144 (42%), Gaps = 16/144 (11%)
Query: 481 CDVNLKEQGRLLRQNEFIVSQGK------------GKKCLRHVFLFEELILFSKARR--F 526
D NL + G+LL Q F V K RH+FL E+ +LF K R
Sbjct: 3 YDGNLGDLGKLLMQGSFSVWTDHKKGHTKVKELARFKPMQRHLFLHEKAVLFCKKREENG 62
Query: 527 PDRKNLDLYIYKHSMKMSDIGITAQIGDSSTKFEIWFRKRKPNETFTLQSMSEDIKQAWT 586
+ Y YK S+ M+ +GIT + + KFEIW+ E + +Q+ + +IK AW
Sbjct: 63 EGYEKAPSYSYKQSLNMTAVGITENVKGDTKKFEIWY--NAREEVYIIQAPTPEIKAAWV 120
Query: 587 DELSNLLWKQALRNRAMRLQEMSS 610
+ + +L Q R
Sbjct: 121 NAIRKVLTSQLQACREASQHRALE 144
>d1ntya2 b.55.1.1 (A:1415-1535) Triple functional domain protein
TRIO {Human (Homo sapiens) [TaxId: 9606]}
Length = 121
Score = 109 bits (274), Expect = 6e-29
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 6/121 (4%)
Query: 481 CDVNLKEQGRLLRQNEFIVSQGKG---KKCLRHVFLFEELILFSKARRFPDRKNLDLYIY 537
D N++ QG L+ Q F V K K RH+FLFE ++FSK + D Y+Y
Sbjct: 3 FDENIESQGELILQESFQVWDPKTLIRKGRERHLFLFEMSLVFSKEVK--DSSGRSKYLY 60
Query: 538 KHSMKMSDIGITAQIGDSSTKFEIWFRKRK-PNETFTLQSMSEDIKQAWTDELSNLLWKQ 596
K + S++G+T + KF +W + + L++ S + KQ W + ++ ++
Sbjct: 61 KSKLFTSELGVTEHVEGDPCKFALWVGRTPTSDNKIVLKASSIENKQDWIKHIREVIQER 120
Query: 597 A 597
Sbjct: 121 T 121
>d2dfka1 a.87.1.1 (A:37-239) Rho guanine nucleotide exchange factor
9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 203
Score = 107 bits (268), Expect = 3e-27
Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 15/182 (8%)
Query: 303 IMREMIQTERDYVKSLEYVILNYIPELTREDIPQALRGQRNVIFGNIEKIYEFHSQHFLG 362
++ E++ TER Y+K L+ + Y+ + R+ Q VIFGNIE IY F F+
Sbjct: 18 VINEIMSTERHYIKHLKDICEGYLKQC-RKRRDMFSDEQLKVIFGNIEDIYRFQ-MGFVR 75
Query: 363 ELEQCAN----LPLSVGQCFLNHENKFYLYALYNKNKPKSDALMTEYGSS------FFKA 412
+LE+ N +G CFL H++ F++Y+ Y N + +++ F
Sbjct: 76 DLEKQYNNDDPHLSEIGPCFLEHQDGFWIYSEYCNNHLDACMELSKLMKDSRYQHFFEAC 135
Query: 413 KQLELADRMDLASYLLKPVQRMGKYALLLQQLMK---ASRQDVKDIKEAESMVRFQLRHG 469
+ L+ + + +LL PVQ++ KY L L +L+K D + + A +++R +
Sbjct: 136 RLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTAQDHSDYRYVAAALAVMRNVTQQI 195
Query: 470 ND 471
N+
Sbjct: 196 NE 197
>d1fhoa_ b.55.1.1 (A:) UNC-89 {Nematode (Caenorhabditis elegans)
[TaxId: 6239]}
Length = 119
Score = 103 bits (259), Expect = 5e-27
Identities = 22/110 (20%), Positives = 45/110 (40%), Gaps = 7/110 (6%)
Query: 484 NLKEQGRLLRQNEFIVSQGKGKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKM 543
+ + GR++R + F V +G LR+VFLF I+F++ Y + S+++
Sbjct: 3 DTGKLGRIIRHDAFQVWEGDEPPKLRYVFLFRNKIMFTEQDASTSP---PSYTHYSSIRL 59
Query: 544 SDIGITAQIGDSSTKFEIWFRKRKPNE---TFTLQSMSEDIKQAWTDELS 590
I D + ++ SE +++AW +++
Sbjct: 60 DKYNIRQHTTD-EDTIVLQPQEPGLPSFRIKPKDFETSEYVRKAWLRDIA 108
>d1ki1b1 a.87.1.1 (B:1229-1438) GEF of intersectin {Human (Homo
sapiens) [TaxId: 9606]}
Length = 210
Score = 105 bits (263), Expect = 2e-26
Identities = 34/193 (17%), Positives = 71/193 (36%), Gaps = 19/193 (9%)
Query: 295 KTQKNLLFIMREMIQTERDYVKSLEYVILNYIPELTREDIPQALRGQRNVIFGNIEKIYE 354
T++ + E+I TE +YV L+ V + L ++ + +IF N +++
Sbjct: 5 PTERKRQGYIHELIVTEENYVNDLQLVTEIFQKPLMESELLT--EKEVAMIFVNWKELIM 62
Query: 355 FHSQHFLGELEQCANLPL------SVGQCFLNHENKFYLYALYNKNKPKSDALMTEYGSS 408
+ L L + +G Y + + AL+ +
Sbjct: 63 CN-IKLLKALRVRKKMSGEKMPVKMIGDILSAQLPHMQPYIRFCSRQLNGAALIQQKTDE 121
Query: 409 FFKAKQL-------ELADRMDLASYLLKPVQRMGKYALLLQQLMK---ASRQDVKDIKEA 458
K+ M L+S++LKP+QR+ +Y L+++ +++ + D +K A
Sbjct: 122 APDFKEFVKRLEMDPRCKGMPLSSFILKPMQRVTRYPLIIKNILENTPENHPDHSHLKHA 181
Query: 459 ESMVRFQLRHGND 471
N+
Sbjct: 182 LEKAEELCSQVNE 194
>d1xcga1 a.87.1.1 (A:714-941) Rho guanine nucleotide exchange factor
11, PDZ-RhoGEF {Human (Homo sapiens) [TaxId: 9606]}
Length = 228
Score = 105 bits (263), Expect = 3e-26
Identities = 30/195 (15%), Positives = 78/195 (40%), Gaps = 20/195 (10%)
Query: 295 KTQKNLLFIMREMIQTERDYVKSLEYVILNYIPELTREDIPQALRGQRNVIFGNIEKIYE 354
+ + + ++ E+ TE ++++L + L + + +E++ R + +F N+ ++ E
Sbjct: 17 QREIDRQEVINELFVTEASHLRTLRVLDLIFYQRMKKENLMP--REELARLFPNLPELIE 74
Query: 355 FHSQHF--LGELEQCANLPLSVGQCFLNH------ENKFYLYALYNKNKPKSDALMTEYG 406
H+ + +L + + + L E + A + + + L+
Sbjct: 75 IHNSWCEAMKKLREEGPIIKEISDLMLARFDGPAREELQQVAAQFCSYQSIALELIKTKQ 134
Query: 407 SSFFKAKQL-------ELADRMDLASYLLKPVQRMGKYALLLQQLMK---ASRQDVKDIK 456
+ + R+ L ++ +QR+ KY LLL+ ++K + + +
Sbjct: 135 RKESRFQLFMQEAESHPQCRRLQLRDLIISEMQRLTKYPLLLESIIKHTEGGTSEHEKLC 194
Query: 457 EAESMVRFQLRHGND 471
A R L++ N+
Sbjct: 195 RARDQCREILKYVNE 209
>d1dbha1 a.87.1.1 (A:198-404) Son of sevenless-1 (sos-1) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 207
Score = 96.8 bits (240), Expect = 2e-23
Identities = 35/192 (18%), Positives = 65/192 (33%), Gaps = 21/192 (10%)
Query: 303 IMREMIQTERDYVKSLEYVILNYIPELTREDIPQALRGQRNVIFGNIEKIYEFHSQHFLG 362
+++ + R Y++ L +I + + IF I I+E LG
Sbjct: 7 LVKAFMAEIRQYIRELNLIIKVFREPF-VSNSKLFSANDVENIFSRIVDIHELS-VKLLG 64
Query: 363 ELEQCA------NLPLSVGQCFLNH--ENKFYLYALYNKNKPKSDALMT---------EY 405
+E + VG CF + E F Y Y ++ +
Sbjct: 65 HIEDTVEMTDEGSPHPLVGSCFEDLAEELAFDPYESYARDILRPGFHDRFLSQLSKPGAA 124
Query: 406 GSSFFKAKQLELADRMDLASYLLKPVQRMGKYALLLQQLMKAS--RQDVKDIKEAESMVR 463
+ + A + L LL PV Y LL+QL + S ++D + +K+A + +
Sbjct: 125 LYLQSIGEGFKEAVQYVLPRLLLAPVYHCLHYFELLKQLEEKSEDQEDKECLKQAITALL 184
Query: 464 FQLRHGNDLLAM 475
+ +
Sbjct: 185 NVQSGMEKICSK 196
>d1txda1 a.87.1.1 (A:766-999) Rho guanine nucleotide exchange factor
12 {Human (Homo sapiens), gamma isoform [TaxId: 9606]}
Length = 234
Score = 96.0 bits (238), Expect = 6e-23
Identities = 37/197 (18%), Positives = 77/197 (39%), Gaps = 23/197 (11%)
Query: 295 KTQKNLLFIMREMIQTERDYVKSLEYVILNYIPELTREDIPQALRGQRNVIFGNIEKIYE 354
+ ++ E+ TER +V++L+ + + ++RE I + IF N+E I +
Sbjct: 18 PCEIKRQEVINELFYTERAHVRTLKVLDQVFYQRVSREGILS--PSELRKIFSNLEDILQ 75
Query: 355 FHSQHFLGELEQC-----ANLPLSVGQCFLNH------ENKFYLYALYNKNKPKSDALMT 403
H +++ ++ +G+ L E + A + N+P + ++
Sbjct: 76 LH-IGLNEQMKAVRKRNETSVIDQIGEDLLTWFSGPGEEKLKHAAATFCSNQPFALEMIK 134
Query: 404 EYGSSFFKAKQ-------LELADRMDLASYLLKPVQRMGKYALLLQQLMKAS--RQDVKD 454
+ + L R+ L + +QR+ KY LLL + K + + +
Sbjct: 135 SRQKKDSRFQTFVQDAESNPLCRRLQLKDIIPTQMQRLTKYPLLLDNIAKYTEWPTEREK 194
Query: 455 IKEAESMVRFQLRHGND 471
+K+A R L N
Sbjct: 195 VKKAADHCRQILNFVNQ 211
>d1dbha2 b.55.1.1 (A:418-550) Son of sevenless-1 (sos-1) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 133
Score = 76.7 bits (188), Expect = 2e-17
Identities = 20/119 (16%), Positives = 42/119 (35%), Gaps = 8/119 (6%)
Query: 484 NLKEQGR-LLRQNEFIVSQGKGKKCLRHVFLFEELILFSKA---RRFPDRKNLDLYIYKH 539
++ + + + G K RH+FLF+ L++ K+ + + Y K
Sbjct: 19 DIGQCCNEFIMEGTLTR---VGAKHERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKE 75
Query: 540 SMKMSDIGITAQIGDSSTKFEIWFRKRKPNETFTLQSMSEDIKQAWTDELSNLLWKQAL 598
M + I + + K + + + S + K W L +L ++ L
Sbjct: 76 KFFMRKVQINDKDDTNEYKHAFEIILK-DENSVIFSAKSAEEKNNWMAALISLQYRSTL 133
>d1txda2 b.55.1.1 (A:1020-1133) Rho guanine nucleotide exchange
factor 12 {Human (Homo sapiens), gamma isoform [TaxId:
9606]}
Length = 114
Score = 75.9 bits (186), Expect = 3e-17
Identities = 12/113 (10%), Positives = 37/113 (32%), Gaps = 11/113 (9%)
Query: 491 LLRQNEFIVSQGKGKKCLRHVFLFEELILFSKARR----------FPDRKNLDLYIYKHS 540
++ + + + K + L E++++ + + + +
Sbjct: 1 MIHEGPLVWKVNRDKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPV 60
Query: 541 MKMSDIGITAQIGDSSTKFEIWFRKRKPNETFTLQSMSEDIKQAWTDELSNLL 593
+K+S + + D+ F I + + L + + K W D + +
Sbjct: 61 IKLSTVLVRQVATDNKALFVIS-MSDNGAQIYELVAQTVSEKTVWQDLICRMA 112
>d1v61a_ b.55.1.1 (A:) Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 132
Score = 55.9 bits (134), Expect = 5e-10
Identities = 13/111 (11%), Positives = 41/111 (36%), Gaps = 7/111 (6%)
Query: 484 NLKEQGRLLRQNEFIV-SQGKGKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMK 542
++K G ++ ++ ++ +K R+ LF +++ A + ++Y+ +
Sbjct: 21 DIKTLGNVIFMSQVVMQHGACEEKEERYFLLFSSVLIMLSA-----SPRMSGFMYQGKIP 75
Query: 543 MSDIGITAQIGDSSTKFEIWFRKRKPNETFTLQSMSEDIKQAWTDELSNLL 593
++ + + + E + + Q W ++L+ L
Sbjct: 76 IAGMVVNRLDEIEGSDCMFEITGSTV-ERIVVHCNNNQDFQEWMEQLNRLT 125
>d2dfka2 b.55.1.1 (A:240-401) Rho guanine nucleotide exchange factor
9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 162
Score = 54.4 bits (130), Expect = 3e-09
Identities = 21/138 (15%), Positives = 40/138 (28%), Gaps = 13/138 (9%)
Query: 480 ECDVNLKEQGRLLRQNEFIVSQGKGKK-CLRHVFLFEELILFSKARRFPDRKNLDLYIYK 538
E D L L+ E + R FLF+ ++ K D D+ YK
Sbjct: 16 EGDDILDRSSELIYTGEMAWIYQPYGRNQQRVFFLFDHQMVLCK----KDLIRRDILYYK 71
Query: 539 HSMKMSDIGITAQIGDSSTKFEIWFR------KRKPNETFTLQSMSEDIKQAWTDELSNL 592
+ M + F + + ++ E + + K W
Sbjct: 72 GRIDMDKYEVIDIEDGRDDDFNVSMKNAFKLHNKETEEVHLFFAKKLEEKIRWLRAFREE 131
Query: 593 LWKQALRNRAMRLQEMSS 610
++ ++ E+S
Sbjct: 132 --RKMVQEDEKIGFEISE 147
>d1xcga2 b.55.1.1 (A:942-1081) Rho guanine nucleotide exchange
factor 11, PDZ-RhoGEF {Human (Homo sapiens) [TaxId:
9606]}
Length = 140
Score = 53.2 bits (127), Expect = 5e-09
Identities = 20/121 (16%), Positives = 41/121 (33%), Gaps = 15/121 (12%)
Query: 490 RLLRQNEFIVSQGKGKKCLRHVFLFEELILF---------SKARRFPDRKNLDLYIYKHS 540
+++ + K K HV L E+L++ K + D
Sbjct: 24 KMIHEGPLTWRISKDKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSP 83
Query: 541 MKMSDIGITAQIGDSSTKFEIW-FRKRKPNETFTLQSMSEDIKQAWTDELSNLLWKQALR 599
+ + + + F I K P + + L +++ K W + L ++A+R
Sbjct: 84 VLKLNAVLIRSVATDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELL-----EEAVR 138
Query: 600 N 600
N
Sbjct: 139 N 139
>d1ki1b2 b.55.1.1 (B:1439-1580) GEF of intersectin {Human (Homo
sapiens) [TaxId: 9606]}
Length = 142
Score = 52.9 bits (126), Expect = 7e-09
Identities = 17/117 (14%), Positives = 46/117 (39%), Gaps = 14/117 (11%)
Query: 484 NLKEQGRLLRQNEFIVSQGKGKKCLRHVFLFEELILFSKARR---------FPDRKNLDL 534
N + L + ++ + + FLF + +L ++ + K+
Sbjct: 18 NCLGPRKFLHSGKLYKAKNNKE---LYGFLFNDFLLLTQITKPLGSSGTDKVFSPKSNLQ 74
Query: 535 YIYKHSMKMSDIGITAQIGDSSTKFEIWFRKRKPNETFTLQSMSEDIKQAWTDELSN 591
Y+YK + ++++ + + + E F + +TL++ S + + AW ++
Sbjct: 75 YMYKTPIFLNEVLVK--LPTDPSGDEPIFHISHIDRVYTLRAESINERTAWVQKIKA 129
>d1zc3b1 b.55.1.1 (B:171-279) Exocyst complex protein EXO84 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 109
Score = 47.8 bits (113), Expect = 2e-07
Identities = 15/106 (14%), Positives = 34/106 (32%), Gaps = 9/106 (8%)
Query: 489 GR-LLRQNEF--IVSQGKGKKCLRHVFLFEELILFSKARRFPDRKNLDLYIYKHSMKMSD 545
G+ L+ + + + H FL + +L + + +Y Y +
Sbjct: 1 GQYLVYNGDLVEYEADHMAQLQRVHGFLMNDCLLVAT----WLPQRRGMYRYNALYPLDR 56
Query: 546 IGITAQIGDSSTKFEIWFRKRKPNETFTLQSMSEDIKQAWTDELSN 591
+ + + K E+ Q+ + IK+ W + L
Sbjct: 57 LAVVNVKDNPPMKDMFKL--LMFPESRIFQAENAKIKREWLEVLEE 100
>d1boba_ d.108.1.1 (A:) Histone acetyltransferase HAT1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 315
Score = 39.0 bits (91), Expect = 0.002
Identities = 19/109 (17%), Positives = 42/109 (38%), Gaps = 13/109 (11%)
Query: 375 GQCFLNHENKFYLYALYNKNKPKSDALMTEY-----GSSFFKAKQLELADRMDLASYL-L 428
+ + +Y L NK + +T Y + + ++ R ++ +L
Sbjct: 159 ANYIDETDPSWQIYWLLNKKTKELIGFVTTYKYWHYLGAKSFDEDIDKKFRAKISQFLIF 218
Query: 429 KPVQRMGKYALLLQQLMKASRQD--VKDI---KEAESMVRFQLRHGNDL 472
P Q G + L + ++++ +D + +I E+ LR ND+
Sbjct: 219 PPYQNKGHGSCLYEAIIQSWLEDKSITEITVEDPNEAFDD--LRDRNDI 265
>d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 31.3 bits (70), Expect = 0.11
Identities = 11/82 (13%), Positives = 26/82 (31%), Gaps = 9/82 (10%)
Query: 524 RRFPDRKNLDLYIYKHSMKMSDIGI---------TAQIGDSSTKFEIWFRKRKPNETFTL 574
RR+ + +K ++ + + + F + TF +
Sbjct: 21 RRYFQLDENTIGYFKSELEKEPLRVIPLKEVHKVQECKQSDIMMRDNLFEIVTTSRTFYV 80
Query: 575 QSMSEDIKQAWTDELSNLLWKQ 596
Q+ S + +W +S + Q
Sbjct: 81 QADSPEEMHSWIKAVSGAIVAQ 102
>d1yt8a2 c.46.1.2 (A:6-106) Thiosulfate sulfurtransferase PA2603
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 101
Score = 28.4 bits (62), Expect = 1.1
Identities = 10/63 (15%), Positives = 18/63 (28%)
Query: 326 IPELTREDIPQALRGQRNVIFGNIEKIYEFHSQHFLGELEQCANLPLSVGQCFLNHENKF 385
I T DI AL +R + ++ + F H L + + +
Sbjct: 1 IAVRTFHDIRAALLARRELALLDVREEDPFAQAHPLFAANLPLSRLELEIHARVPRRDTP 60
Query: 386 YLY 388
Sbjct: 61 ITV 63
>d1feca3 d.87.1.1 (A:358-485) Trypanothione reductase {Crithidia
fasciculata [TaxId: 5656]}
Length = 128
Score = 28.5 bits (63), Expect = 1.3
Identities = 7/38 (18%), Positives = 12/38 (31%), Gaps = 1/38 (2%)
Query: 91 TVKQLRQYLMAHPPLASEHFTEMIQLAKKLNNDKLIEQ 128
+ + HP +E M A K +E+
Sbjct: 92 KISDFYNTIGVHPTS-AEELCSMRTPAYFYEKGKRVEK 128
>d1unqa_ b.55.1.1 (A:) Rac-alpha serine/threonine kinase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 27.6 bits (60), Expect = 2.5
Identities = 11/85 (12%), Positives = 23/85 (27%), Gaps = 13/85 (15%)
Query: 522 KARRFPDRKNLDLYIYKHSMKMSDIGITAQIGDSSTK-------------FEIWFRKRKP 568
+ R F + + YK + D S + F I +
Sbjct: 24 RPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQWTT 83
Query: 569 NETFTLQSMSEDIKQAWTDELSNLL 593
T + + ++ WT + +
Sbjct: 84 VIERTFHVETPEEREEWTTAIQTVA 108
>d1xcca_ c.47.1.10 (A:) 1-Cys peroxiredoxin {Plasmodium yoelii
yoelii [TaxId: 73239]}
Length = 219
Score = 27.8 bits (61), Expect = 4.0
Identities = 6/22 (27%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
Query: 181 ACPC-WDPGDNSTLPSPSIPEE 201
A P W+ GD + P++ ++
Sbjct: 172 ATPVNWNEGDKCCVI-PTLQDD 192
>d1prxa_ c.47.1.10 (A:) 1-Cys peroxiredoxin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 220
Score = 27.1 bits (59), Expect = 7.7
Identities = 10/28 (35%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Query: 175 HHTPSHACPC-WDPGDNSTLPSPSIPEE 201
A P W GD+ + P+IPEE
Sbjct: 166 TAEKRVATPVDWKDGDSVMVL-PTIPEE 192
>d1svdm1 d.73.1.1 (M:3-110) Ribulose 1,5-bisphosphate
carboxylase-oxygenase {Halothiobacillus neapolitanus
[TaxId: 927]}
Length = 108
Score = 25.9 bits (57), Expect = 7.8
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 312 RDYVKSLEYVILNYIPELTREDI 334
+DY +SL+Y +Y+P + E I
Sbjct: 3 QDYKQSLKYETFSYLPPMNAERI 25
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.315 0.130 0.383
Gapped
Lambda K H
0.267 0.0643 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,637,088
Number of extensions: 124498
Number of successful extensions: 360
Number of sequences better than 10.0: 1
Number of HSP's gapped: 324
Number of HSP's successfully gapped: 33
Length of query: 732
Length of database: 2,407,596
Length adjustment: 92
Effective length of query: 640
Effective length of database: 1,144,436
Effective search space: 732439040
Effective search space used: 732439040
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (25.5 bits)