Query psy9955
Match_columns 60
No_of_seqs 109 out of 402
Neff 6.1
Searched_HMMs 46136
Date Fri Aug 16 23:56:19 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9955.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/9955hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0505|consensus 99.4 3.9E-13 8.5E-18 98.3 3.4 57 2-59 158-214 (527)
2 PF13637 Ank_4: Ankyrin repeat 99.2 6.1E-12 1.3E-16 66.2 2.5 38 22-60 14-51 (54)
3 PF13857 Ank_5: Ankyrin repeat 99.1 2.5E-11 5.5E-16 64.8 0.5 32 28-60 1-33 (56)
4 PF13857 Ank_5: Ankyrin repeat 99.0 2.3E-10 4.9E-15 61.1 3.2 47 3-50 1-56 (56)
5 KOG4412|consensus 99.0 1.3E-10 2.9E-15 77.4 2.2 53 7-60 96-156 (226)
6 PF12796 Ank_2: Ankyrin repeat 99.0 2.4E-10 5.2E-15 64.0 2.6 38 22-60 39-76 (89)
7 PHA02798 ankyrin-like protein; 98.9 6.7E-10 1.5E-14 78.7 3.2 52 3-55 57-121 (489)
8 PHA02795 ankyrin-like protein; 98.9 1.1E-09 2.3E-14 79.1 3.2 52 3-55 207-266 (437)
9 PHA02989 ankyrin repeat protei 98.9 1.2E-09 2.5E-14 77.6 3.3 56 4-60 243-306 (494)
10 PHA03095 ankyrin-like protein; 98.9 1.4E-09 3.1E-14 75.4 3.4 56 3-59 243-306 (471)
11 PHA02875 ankyrin repeat protei 98.9 2.2E-09 4.7E-14 73.9 3.5 57 3-60 121-185 (413)
12 PHA02946 ankyin-like protein; 98.8 2.4E-09 5.1E-14 76.2 3.5 52 3-55 58-117 (446)
13 PHA02874 ankyrin repeat protei 98.8 2.7E-09 5.9E-14 74.3 3.7 56 4-60 111-174 (434)
14 PHA02878 ankyrin repeat protei 98.8 2.3E-09 5E-14 75.6 3.4 55 4-59 154-217 (477)
15 PHA02736 Viral ankyrin protein 98.8 3.5E-09 7.7E-14 64.7 3.4 56 3-59 77-142 (154)
16 PHA02884 ankyrin repeat protei 98.8 3.3E-09 7.1E-14 73.3 3.5 58 3-60 52-121 (300)
17 PLN03192 Voltage-dependent pot 98.8 2.8E-09 6.2E-14 80.2 3.5 58 2-60 543-608 (823)
18 PHA02798 ankyrin-like protein; 98.8 3.4E-09 7.4E-14 75.1 3.3 54 5-59 246-307 (489)
19 KOG4412|consensus 98.8 2E-09 4.3E-14 71.8 1.7 54 5-59 60-122 (226)
20 PHA03100 ankyrin repeat protei 98.8 4.1E-09 8.9E-14 73.3 3.3 57 3-60 236-300 (480)
21 PHA02859 ankyrin repeat protei 98.8 5E-09 1.1E-13 67.8 3.3 56 3-59 109-175 (209)
22 PHA02791 ankyrin-like protein; 98.8 5E-09 1.1E-13 71.5 3.2 36 23-59 75-110 (284)
23 PHA03095 ankyrin-like protein; 98.8 6.2E-09 1.3E-13 72.2 3.4 57 3-60 208-274 (471)
24 PHA02743 Viral ankyrin protein 98.8 6.8E-09 1.5E-13 65.0 3.2 34 25-59 76-110 (166)
25 KOG0515|consensus 98.8 4E-09 8.6E-14 78.7 2.4 38 22-60 596-633 (752)
26 KOG0509|consensus 98.8 3.9E-09 8.5E-14 78.6 2.2 53 7-59 68-128 (600)
27 PHA03100 ankyrin repeat protei 98.7 1.1E-08 2.4E-13 71.2 4.3 57 3-60 195-267 (480)
28 PHA02989 ankyrin repeat protei 98.7 6.5E-09 1.4E-13 73.8 3.1 56 3-59 94-163 (494)
29 PTZ00322 6-phosphofructo-2-kin 98.7 8E-09 1.7E-13 76.7 3.6 57 3-60 101-165 (664)
30 KOG4177|consensus 98.7 5.4E-09 1.2E-13 82.1 2.6 55 4-59 527-589 (1143)
31 PHA02743 Viral ankyrin protein 98.7 1.1E-08 2.3E-13 64.1 3.4 57 3-60 79-145 (166)
32 PHA02741 hypothetical protein; 98.7 8.5E-09 1.8E-13 64.4 3.0 37 23-60 78-115 (169)
33 PLN03192 Voltage-dependent pot 98.7 8.6E-09 1.9E-13 77.6 3.5 37 23-60 636-672 (823)
34 PHA02874 ankyrin repeat protei 98.7 1E-08 2.2E-13 71.5 3.5 57 3-60 143-207 (434)
35 PHA02946 ankyin-like protein; 98.7 8.5E-09 1.8E-13 73.4 3.2 55 4-59 160-226 (446)
36 KOG0508|consensus 98.7 1.9E-09 4.1E-14 79.5 -0.1 55 4-59 104-166 (615)
37 PHA02791 ankyrin-like protein; 98.7 1.7E-08 3.7E-13 68.9 4.5 57 3-60 80-145 (284)
38 PHA02716 CPXV016; CPX019; EVM0 98.7 1.4E-08 3.1E-13 77.3 3.8 56 3-59 161-230 (764)
39 PHA02878 ankyrin repeat protei 98.7 1.6E-08 3.5E-13 71.3 3.4 57 3-60 187-252 (477)
40 PHA02736 Viral ankyrin protein 98.7 2.1E-08 4.6E-13 61.3 3.4 38 22-60 71-109 (154)
41 PHA02859 ankyrin repeat protei 98.7 2.2E-08 4.7E-13 64.8 3.6 57 3-60 72-142 (209)
42 KOG0505|consensus 98.7 9E-09 1.9E-13 75.7 1.9 57 3-60 59-123 (527)
43 PHA02741 hypothetical protein; 98.6 2.9E-08 6.2E-13 62.0 3.4 57 3-60 83-149 (169)
44 PHA02876 ankyrin repeat protei 98.6 2.6E-08 5.7E-13 73.0 3.5 38 22-60 158-195 (682)
45 PHA02730 ankyrin-like protein; 98.6 2.6E-08 5.5E-13 75.1 3.2 38 22-60 57-96 (672)
46 KOG0514|consensus 98.6 2E-08 4.4E-13 72.2 2.4 37 23-60 354-390 (452)
47 PHA02917 ankyrin-like protein; 98.6 3.9E-08 8.4E-13 73.4 3.9 38 22-60 209-248 (661)
48 KOG0508|consensus 98.6 1.2E-08 2.7E-13 75.3 1.3 57 3-60 136-200 (615)
49 KOG4177|consensus 98.6 4.4E-08 9.6E-13 77.1 3.7 57 3-60 559-623 (1143)
50 PHA02795 ankyrin-like protein; 98.6 5.1E-08 1.1E-12 70.5 3.4 38 22-60 201-238 (437)
51 PHA02884 ankyrin repeat protei 98.6 7E-08 1.5E-12 66.7 3.9 55 3-58 89-152 (300)
52 PHA02716 CPXV016; CPX019; EVM0 98.6 4.5E-08 9.7E-13 74.6 3.1 49 7-56 487-548 (764)
53 PHA02917 ankyrin-like protein; 98.6 5.9E-08 1.3E-12 72.5 3.6 57 2-59 17-84 (661)
54 PHA02876 ankyrin repeat protei 98.5 6.8E-08 1.5E-12 70.8 3.5 57 3-60 164-228 (682)
55 PHA02875 ankyrin repeat protei 98.5 4.8E-08 1E-12 67.3 2.5 36 23-59 49-84 (413)
56 KOG0512|consensus 98.5 6.9E-08 1.5E-12 64.3 2.7 38 22-60 76-114 (228)
57 PF13606 Ank_3: Ankyrin repeat 98.5 3.2E-08 7E-13 47.5 0.9 19 42-60 1-19 (30)
58 KOG0509|consensus 98.5 1.3E-07 2.7E-12 70.7 3.3 52 3-55 131-190 (600)
59 KOG0195|consensus 98.5 4.5E-08 9.8E-13 69.5 0.7 56 3-59 53-116 (448)
60 PHA02730 ankyrin-like protein; 98.4 1.3E-07 2.9E-12 71.3 2.8 36 24-60 444-479 (672)
61 PHA02792 ankyrin-like protein; 98.4 2.2E-07 4.7E-12 69.8 3.3 57 3-60 358-427 (631)
62 PTZ00322 6-phosphofructo-2-kin 98.4 3E-07 6.6E-12 68.4 3.4 38 22-60 95-132 (664)
63 PF00023 Ank: Ankyrin repeat H 98.4 1.3E-07 2.9E-12 45.4 0.7 19 42-60 1-19 (33)
64 KOG1710|consensus 98.3 4.3E-07 9.4E-12 64.2 3.4 38 22-59 58-95 (396)
65 COG0666 Arp FOG: Ankyrin repea 98.3 7.6E-07 1.6E-11 53.9 3.3 55 4-59 93-163 (235)
66 KOG0502|consensus 98.3 2.3E-07 5.1E-12 63.7 1.0 57 3-60 179-243 (296)
67 KOG0512|consensus 98.3 6.3E-07 1.4E-11 59.8 2.5 53 3-56 116-176 (228)
68 PF12796 Ank_2: Ankyrin repeat 98.3 1E-06 2.2E-11 49.1 3.0 34 22-60 10-43 (89)
69 KOG4214|consensus 98.0 3.8E-06 8.3E-11 51.3 2.6 38 22-60 47-84 (117)
70 PHA02792 ankyrin-like protein; 98.0 5.9E-06 1.3E-10 62.2 3.6 49 3-52 396-452 (631)
71 cd00204 ANK ankyrin repeats; 98.0 1.1E-05 2.4E-10 45.1 3.4 36 23-59 54-89 (126)
72 KOG0818|consensus 97.9 1.2E-05 2.6E-10 60.0 3.5 35 22-56 146-180 (669)
73 COG0666 Arp FOG: Ankyrin repea 97.9 1.4E-05 3.1E-10 48.3 3.1 35 24-59 88-127 (235)
74 KOG0502|consensus 97.9 8.1E-06 1.8E-10 56.2 2.2 54 3-57 212-273 (296)
75 KOG0510|consensus 97.8 1E-05 2.2E-10 62.7 2.3 37 22-59 286-322 (929)
76 KOG0510|consensus 97.8 1.1E-05 2.4E-10 62.5 2.4 36 22-58 134-169 (929)
77 KOG0195|consensus 97.7 2.5E-05 5.4E-10 55.7 2.7 37 22-59 47-83 (448)
78 TIGR00870 trp transient-recept 97.7 3E-05 6.5E-10 57.7 3.1 39 22-60 141-192 (743)
79 KOG0511|consensus 97.6 3.7E-05 8.1E-10 56.1 2.6 46 10-60 41-86 (516)
80 TIGR00870 trp transient-recept 97.6 4.1E-05 9E-10 57.0 2.0 38 22-60 30-70 (743)
81 KOG0506|consensus 97.5 3.6E-05 7.8E-10 57.3 1.2 38 22-60 519-556 (622)
82 cd00204 ANK ankyrin repeats; 97.5 0.00016 3.4E-09 40.3 3.4 37 22-59 20-56 (126)
83 KOG0783|consensus 97.4 8E-05 1.7E-09 58.5 2.2 37 23-59 66-102 (1267)
84 KOG4214|consensus 97.4 4.2E-05 9E-10 46.8 0.5 36 22-59 15-50 (117)
85 PF13637 Ank_4: Ankyrin repeat 97.2 0.00012 2.5E-09 38.0 0.6 18 43-60 1-18 (54)
86 KOG3676|consensus 97.1 0.00064 1.4E-08 52.5 3.6 54 4-58 260-323 (782)
87 KOG0522|consensus 96.9 0.00074 1.6E-08 50.5 2.7 50 9-59 47-104 (560)
88 KOG0507|consensus 96.9 0.00056 1.2E-08 53.0 1.8 37 22-59 95-131 (854)
89 smart00248 ANK ankyrin repeats 96.9 0.00051 1.1E-08 28.9 0.9 19 42-60 1-19 (30)
90 KOG0818|consensus 96.8 0.00087 1.9E-08 50.4 2.4 56 3-59 152-216 (669)
91 KOG0514|consensus 96.8 0.00075 1.6E-08 49.1 1.7 58 2-60 286-357 (452)
92 KOG0507|consensus 96.7 0.00044 9.6E-09 53.5 0.1 51 9-60 41-99 (854)
93 KOG3676|consensus 96.6 0.002 4.4E-08 49.8 3.2 29 22-51 253-281 (782)
94 KOG0520|consensus 96.6 0.00067 1.5E-08 53.4 0.5 29 30-59 629-657 (975)
95 KOG2384|consensus 96.6 0.0022 4.8E-08 43.2 2.9 53 7-60 2-63 (223)
96 KOG2384|consensus 96.4 0.0014 3E-08 44.2 1.0 28 31-59 1-28 (223)
97 KOG0506|consensus 96.4 0.0013 2.9E-08 49.1 1.0 57 3-60 525-590 (622)
98 KOG0521|consensus 96.4 0.002 4.2E-08 49.9 1.8 35 24-59 671-705 (785)
99 KOG0515|consensus 96.2 0.0039 8.4E-08 47.4 2.6 46 10-60 555-600 (752)
100 KOG1710|consensus 96.0 0.0051 1.1E-07 44.0 2.4 36 24-60 27-62 (396)
101 KOG0705|consensus 95.9 0.011 2.4E-07 45.2 3.9 35 24-58 639-676 (749)
102 PF13606 Ank_3: Ankyrin repeat 95.6 0.013 2.9E-07 27.6 2.3 16 22-37 15-30 (30)
103 PF00023 Ank: Ankyrin repeat H 95.4 0.024 5.1E-07 26.6 2.6 17 22-38 15-31 (33)
104 KOG4369|consensus 94.8 0.017 3.7E-07 47.4 1.8 36 23-59 771-806 (2131)
105 KOG4369|consensus 94.5 0.0064 1.4E-07 49.8 -1.1 36 23-59 838-873 (2131)
106 KOG0522|consensus 93.6 0.037 8.1E-07 41.6 1.4 30 29-59 42-71 (560)
107 KOG0521|consensus 89.4 0.15 3.2E-06 39.8 0.8 55 3-58 675-737 (785)
108 KOG2505|consensus 89.3 0.27 5.7E-06 37.3 2.0 36 24-59 406-446 (591)
109 KOG0782|consensus 89.3 0.14 3.1E-06 39.7 0.6 33 24-57 914-948 (1004)
110 KOG0783|consensus 86.7 0.75 1.6E-05 37.2 3.1 49 3-52 71-128 (1267)
111 KOG0705|consensus 86.1 0.57 1.2E-05 36.2 2.1 36 23-59 675-710 (749)
112 KOG0782|consensus 78.7 1.5 3.3E-05 34.3 1.9 35 25-60 882-916 (1004)
113 KOG2505|consensus 68.9 3.4 7.4E-05 31.5 1.7 29 22-51 443-471 (591)
114 KOG3609|consensus 66.7 3.6 7.9E-05 32.6 1.6 25 36-60 124-148 (822)
115 KOG0511|consensus 63.3 8.8 0.00019 28.7 2.9 49 3-53 55-111 (516)
116 KOG3836|consensus 60.2 1.8 4E-05 33.2 -1.0 32 27-59 414-445 (605)
117 COG1732 OpuBC Periplasmic glyc 59.1 24 0.00053 25.0 4.4 42 16-58 43-86 (300)
118 PF07879 PHB_acc_N: PHB/PHA ac 48.4 10 0.00022 21.2 1.0 23 22-44 22-44 (64)
119 TIGR03414 ABC_choline_bnd chol 39.8 53 0.0011 22.3 3.6 40 17-58 19-59 (290)
120 TIGR01848 PHA_reg_PhaR polyhyd 37.1 20 0.00044 21.9 1.1 23 22-44 22-44 (107)
121 COG0859 RfaF ADP-heptose:LPS h 31.7 53 0.0011 22.5 2.6 25 31-58 250-274 (334)
122 PF14701 hDGE_amylase: glucano 31.1 55 0.0012 24.2 2.7 30 18-51 379-410 (423)
123 PF04282 DUF438: Family of unk 30.1 17 0.00038 20.5 0.0 53 2-57 7-67 (71)
124 KOG2243|consensus 29.5 79 0.0017 28.4 3.5 38 15-53 2220-2258(5019)
125 COG0107 HisF Imidazoleglycerol 27.2 78 0.0017 22.1 2.8 14 22-35 86-99 (256)
126 PRK10916 ADP-heptose:LPS hepto 25.3 42 0.00091 22.8 1.2 12 45-56 271-282 (348)
127 TIGR02193 heptsyl_trn_I lipopo 24.4 46 0.001 22.1 1.3 12 45-56 264-275 (319)
128 PF10975 DUF2802: Protein of u 22.5 31 0.00067 19.1 0.1 15 1-15 38-52 (70)
129 TIGR02195 heptsyl_trn_II lipop 20.8 66 0.0014 21.6 1.5 12 46-57 262-273 (334)
130 KOG3609|consensus 20.5 15 0.00033 29.4 -1.9 26 33-59 53-78 (822)
131 PF03932 CutC: CutC family; I 20.5 1.3E+02 0.0027 19.9 2.7 19 16-34 69-87 (201)
132 PRK00040 rpsP 30S ribosomal pr 20.3 96 0.0021 17.5 1.9 15 22-36 54-68 (75)
No 1
>KOG0505|consensus
Probab=99.36 E-value=3.9e-13 Score=98.31 Aligned_cols=57 Identities=49% Similarity=0.733 Sum_probs=53.7
Q ss_pred hhhhcCCChhhccchHHHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCcccc
Q psy9955 2 QRFVQGINPEDARTFEERSMLEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVM 59 (60)
Q Consensus 2 ~~~~qGi~iea~r~~~~~~ml~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evv 59 (60)
.+.+|||+||++|..+++.|++|+++|+..|.+.+++|.+ |.|.||+||++||+++.
T Consensus 158 ~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~r-G~T~lHvAaa~Gy~e~~ 214 (527)
T KOG0505|consen 158 EMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHAR-GATALHVAAANGYTEVA 214 (527)
T ss_pred HHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccc-cchHHHHHHhhhHHHHH
Confidence 4678999999999999999999999999999999999777 99999999999999875
No 2
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.23 E-value=6.1e-12 Score=66.20 Aligned_cols=38 Identities=34% Similarity=0.467 Sum_probs=30.7
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 22 LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 22 l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
++.++.|++.|.|+|.+ |..|.||||+|+.+|+.+++|
T Consensus 14 ~~~~~~Ll~~~~din~~-d~~g~t~lh~A~~~g~~~~~~ 51 (54)
T PF13637_consen 14 LEIVKLLLEHGADINAQ-DEDGRTPLHYAAKNGNIDIVK 51 (54)
T ss_dssp HHHHHHHHHTTSGTT-B--TTS--HHHHHHHTT-HHHHH
T ss_pred HHHHHHHHHCCCCCCCC-CCCCCCHHHHHHHccCHHHHH
Confidence 66799999999999999 999999999999999999874
No 3
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.08 E-value=2.5e-11 Score=64.81 Aligned_cols=32 Identities=31% Similarity=0.365 Sum_probs=17.4
Q ss_pred HHHcC-CCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 28 WLSSG-CLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 28 Ll~~G-advn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
||+.| +++|.. |..|.||||+||.+|+.++|+
T Consensus 1 LL~~~~~~~n~~-d~~G~T~LH~A~~~g~~~~v~ 33 (56)
T PF13857_consen 1 LLEHGPADVNAQ-DKYGNTPLHWAARYGHSEVVR 33 (56)
T ss_dssp -----T--TT----TTS--HHHHHHHHT-HHHHH
T ss_pred CCccCcCCCcCc-CCCCCcHHHHHHHcCcHHHHH
Confidence 67888 899999 999999999999999999874
No 4
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.04 E-value=2.3e-10 Score=61.09 Aligned_cols=47 Identities=19% Similarity=0.333 Sum_probs=25.1
Q ss_pred hhhcC-CChhhccchHHHHH--------HHHHHHHHHcCCCCCCCCCCCCCcHHHHH
Q psy9955 3 RFVQG-INPEDARTFEERSM--------LEDAKFWLSSGCLGDVPNPKTGASALHVA 50 (60)
Q Consensus 3 ~~~qG-i~iea~r~~~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~A 50 (60)
+++.| ++++.....+.++| .+.+++|++.|+|++.+ |..|.||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~-d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAK-DKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT----TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCC-cCCCCCHHHhC
Confidence 35667 88999999888888 57999999999999999 99999999998
No 5
>KOG4412|consensus
Probab=99.02 E-value=1.3e-10 Score=77.37 Aligned_cols=53 Identities=32% Similarity=0.441 Sum_probs=42.0
Q ss_pred CCChhhccchHHHHH--------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 7 GINPEDARTFEERSM--------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 7 Gi~iea~r~~~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
|.|+++....+.+.+ ++.+++|++.||.++.. |..|.||||.||+.|.+++++
T Consensus 96 ~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~k-D~~~qtplHRAAavGklkvie 156 (226)
T KOG4412|consen 96 GADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIK-DKQGQTPLHRAAAVGKLKVIE 156 (226)
T ss_pred CCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCccc-ccccCchhHHHHhccchhhHH
Confidence 777777777776666 67888888888888888 888888888888888887764
No 6
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.00 E-value=2.4e-10 Score=64.00 Aligned_cols=38 Identities=37% Similarity=0.509 Sum_probs=34.8
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 22 LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 22 l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
++.+++|+++|+++|.. |..|.||||+|+.+|+.+++|
T Consensus 39 ~~~~~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~~~ 76 (89)
T PF12796_consen 39 LEIVKLLLENGADINSQ-DKNGNTALHYAAENGNLEIVK 76 (89)
T ss_dssp HHHHHHHHHTTTCTT-B-STTSSBHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHhccccccc-CCCCCCHHHHHHHcCCHHHHH
Confidence 67999999999999999 999999999999999999874
No 7
>PHA02798 ankyrin-like protein; Provisional
Probab=98.93 E-value=6.7e-10 Score=78.73 Aligned_cols=52 Identities=17% Similarity=0.198 Sum_probs=38.7
Q ss_pred hhhcCCChhhccchHHHHH-------------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCC
Q psy9955 3 RFVQGINPEDARTFEERSM-------------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGY 55 (60)
Q Consensus 3 ~~~qGi~iea~r~~~~~~m-------------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~ 55 (60)
++++|.++++.+..+.+++ .+.+++|+++|+|+|.. |..|.||||+|+.+|+
T Consensus 57 Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~-d~~G~TpLh~a~~~~~ 121 (489)
T PHA02798 57 FINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKK-NSDGETPLYCLLSNGY 121 (489)
T ss_pred HHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCC-CCCcCcHHHHHHHcCC
Confidence 4577888877666655554 46778888888888888 8888888888887763
No 8
>PHA02795 ankyrin-like protein; Provisional
Probab=98.89 E-value=1.1e-09 Score=79.11 Aligned_cols=52 Identities=13% Similarity=0.108 Sum_probs=38.7
Q ss_pred hhhcCCChhhccchHHHHH--------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCC
Q psy9955 3 RFVQGINPEDARTFEERSM--------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGY 55 (60)
Q Consensus 3 ~~~qGi~iea~r~~~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~ 55 (60)
+++.|++++.....+.+++ .+.+++|++.||++|.. +..|.||||+|+.+|+
T Consensus 207 LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~-d~~G~TpLh~Aa~~g~ 266 (437)
T PHA02795 207 CIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAV-MSNGYTCLDVAVDRGS 266 (437)
T ss_pred HHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCc-CCCCCCHHHHHHHcCC
Confidence 3567777777777776666 35777888888888887 7788888888887774
No 9
>PHA02989 ankyrin repeat protein; Provisional
Probab=98.89 E-value=1.2e-09 Score=77.60 Aligned_cols=56 Identities=18% Similarity=0.156 Sum_probs=45.9
Q ss_pred hhcCCChhhccchHHHHH--------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 4 FVQGINPEDARTFEERSM--------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 4 ~~qGi~iea~r~~~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
+..|++++.....+.+++ .+.+++|++.|+|+|.+ |..|.||||+|+.+|+.++|+
T Consensus 243 l~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~-d~~G~TpL~~A~~~~~~~iv~ 306 (494)
T PHA02989 243 ILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNV-SKDGDTVLTYAIKHGNIDMLN 306 (494)
T ss_pred HHhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCcccc-CCCCCCHHHHHHHcCCHHHHH
Confidence 344667777777677776 35789999999999999 999999999999999988763
No 10
>PHA03095 ankyrin-like protein; Provisional
Probab=98.88 E-value=1.4e-09 Score=75.36 Aligned_cols=56 Identities=9% Similarity=0.189 Sum_probs=44.5
Q ss_pred hhhcCCChhhccchHHHHH--------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCcccc
Q psy9955 3 RFVQGINPEDARTFEERSM--------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVM 59 (60)
Q Consensus 3 ~~~qGi~iea~r~~~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evv 59 (60)
++..|++++.....+.+++ .+.++.|++.|||+|.. +..|.||||+|+.+|+.+++
T Consensus 243 ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~-~~~g~tpl~~A~~~~~~~~v 306 (471)
T PHA03095 243 LLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAV-SSDGNTPLSLMVRNNNGRAV 306 (471)
T ss_pred HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccc-CCCCCCHHHHHHHhCCHHHH
Confidence 4567788888777777776 35778888888888888 88888888888888888775
No 11
>PHA02875 ankyrin repeat protein; Provisional
Probab=98.85 E-value=2.2e-09 Score=73.92 Aligned_cols=57 Identities=21% Similarity=0.314 Sum_probs=39.6
Q ss_pred hhhcCCChhhccchHHHHH--------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 3 RFVQGINPEDARTFEERSM--------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 3 ~~~qGi~iea~r~~~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
+++.|.+++.....+.+++ .+.++.|++.|+++|.+ |..|.||||+|+..|+.++++
T Consensus 121 Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~-d~~g~TpL~~A~~~g~~eiv~ 185 (413)
T PHA02875 121 LIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIE-DCCGCTPLIIAMAKGDIAICK 185 (413)
T ss_pred HHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCC-CCCCCCHHHHHHHcCCHHHHH
Confidence 3456777666655555555 45677777777777777 777778888887777777653
No 12
>PHA02946 ankyin-like protein; Provisional
Probab=98.84 E-value=2.4e-09 Score=76.21 Aligned_cols=52 Identities=12% Similarity=0.103 Sum_probs=41.6
Q ss_pred hhhcCCChhhccchHHHHH--------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCC
Q psy9955 3 RFVQGINPEDARTFEERSM--------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGY 55 (60)
Q Consensus 3 ~~~qGi~iea~r~~~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~ 55 (60)
++++|.++++....+.+++ .+.+++|+++||++|.+ |..|.||||+|+.+++
T Consensus 58 Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~-d~~g~TpLh~A~~~~~ 117 (446)
T PHA02946 58 LLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNAC-DKQHKTPLYYLSGTDD 117 (446)
T ss_pred HHHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCC-CCCCCCHHHHHHHcCC
Confidence 4567888888887777776 46788888888888888 8888888888887664
No 13
>PHA02874 ankyrin repeat protein; Provisional
Probab=98.84 E-value=2.7e-09 Score=74.34 Aligned_cols=56 Identities=18% Similarity=0.303 Sum_probs=37.5
Q ss_pred hhcCCChhhccchHHHHH--------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 4 FVQGINPEDARTFEERSM--------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 4 ~~qGi~iea~r~~~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
++.|++++.....+.+++ .+.++.|++.|+++|.+ |..|.||||+|+.+|+.++++
T Consensus 111 l~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~-d~~g~tpLh~A~~~~~~~iv~ 174 (434)
T PHA02874 111 LDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIE-DDNGCYPIHIAIKHNFFDIIK 174 (434)
T ss_pred HHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCc-CCCCCCHHHHHHHCCcHHHHH
Confidence 455666666555555554 45677777777777777 777777777777777776653
No 14
>PHA02878 ankyrin repeat protein; Provisional
Probab=98.84 E-value=2.3e-09 Score=75.56 Aligned_cols=55 Identities=20% Similarity=0.221 Sum_probs=32.7
Q ss_pred hhcCCChhhccch-HHHHH--------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCcccc
Q psy9955 4 FVQGINPEDARTF-EERSM--------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVM 59 (60)
Q Consensus 4 ~~qGi~iea~r~~-~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evv 59 (60)
++.|++++..... +.+++ ++.+++|++.|+++|.+ +..|.||||.|+.+|+.+++
T Consensus 154 l~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~-d~~g~tpLh~A~~~~~~~iv 217 (477)
T PHA02878 154 LSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIP-DKTNNSPLHHAVKHYNKPIV 217 (477)
T ss_pred HHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCc-CCCCCCHHHHHHHhCCHHHH
Confidence 4456666555544 44444 34566666666666666 66666666666666666554
No 15
>PHA02736 Viral ankyrin protein; Provisional
Probab=98.83 E-value=3.5e-09 Score=64.71 Aligned_cols=56 Identities=16% Similarity=0.146 Sum_probs=39.7
Q ss_pred hhhcCCChhhccc-hHHHHH--------HHHHHHHHH-cCCCCCCCCCCCCCcHHHHHHhcCCcccc
Q psy9955 3 RFVQGINPEDART-FEERSM--------LEDAKFWLS-SGCLGDVPNPKTGASALHVAAAKGYIKVM 59 (60)
Q Consensus 3 ~~~qGi~iea~r~-~~~~~m--------l~~~~~Ll~-~Gadvn~~~d~~G~TpLH~AA~~G~~evv 59 (60)
++..|.+++.... .+.+++ .+.+++|++ .|+++|.. +..|.||||+|+..|+.+++
T Consensus 77 Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~-~~~g~tpL~~A~~~~~~~i~ 142 (154)
T PHA02736 77 LMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEIL-NYAFKTPYYVACERHDAKMM 142 (154)
T ss_pred HHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccc-cCCCCCHHHHHHHcCCHHHH
Confidence 3566777777653 455555 346777776 48888887 88888888888888877765
No 16
>PHA02884 ankyrin repeat protein; Provisional
Probab=98.82 E-value=3.3e-09 Score=73.28 Aligned_cols=58 Identities=16% Similarity=0.232 Sum_probs=40.2
Q ss_pred hhhcCCChhhcc----chHHHHH--------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 3 RFVQGINPEDAR----TFEERSM--------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 3 ~~~qGi~iea~r----~~~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
+++.|+|++... ..+.+++ .+.+++|+++|||+|...+..|.||||+|+.+|+.++++
T Consensus 52 LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~~~~eivk 121 (300)
T PHA02884 52 ILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLHGCLKCLE 121 (300)
T ss_pred HHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHcCCHHHHH
Confidence 456787777642 2344444 457788888888888753457888888888888887763
No 17
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=98.82 E-value=2.8e-09 Score=80.18 Aligned_cols=58 Identities=14% Similarity=0.205 Sum_probs=49.6
Q ss_pred hhhhcCCChhhccchHHHHH--------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 2 QRFVQGINPEDARTFEERSM--------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 2 ~~~~qGi~iea~r~~~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
.+++.|.|++.....+.+++ .+.++.|+++|+|+|.+ |..|.||||.|+.+||.++++
T Consensus 543 ~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~-d~~G~TpL~~A~~~g~~~iv~ 608 (823)
T PLN03192 543 ELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIR-DANGNTALWNAISAKHHKIFR 608 (823)
T ss_pred HHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCc-CCCCCCHHHHHHHhCCHHHHH
Confidence 35678999998888888877 56889999999999999 999999999999999988763
No 18
>PHA02798 ankyrin-like protein; Provisional
Probab=98.81 E-value=3.4e-09 Score=75.15 Aligned_cols=54 Identities=11% Similarity=0.072 Sum_probs=46.2
Q ss_pred hcCCChhhccchHHHHH--------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCcccc
Q psy9955 5 VQGINPEDARTFEERSM--------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVM 59 (60)
Q Consensus 5 ~qGi~iea~r~~~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evv 59 (60)
..|+|++.....+.+++ .+.+++|++.|||+|.. +..|.||||+|+.+|+.+++
T Consensus 246 ~~~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~-d~~G~TpL~~A~~~~~~~iv 307 (489)
T PHA02798 246 FSYIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINII-TELGNTCLFTAFENESKFIF 307 (489)
T ss_pred HhcCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCccccc-CCCCCcHHHHHHHcCcHHHH
Confidence 34678888888788887 35889999999999999 99999999999999988775
No 19
>KOG4412|consensus
Probab=98.80 E-value=2e-09 Score=71.81 Aligned_cols=54 Identities=24% Similarity=0.320 Sum_probs=48.5
Q ss_pred hcCCChhhccchHHHHH--------HHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHhcCCcccc
Q psy9955 5 VQGINPEDARTFEERSM--------LEDAKFWLSS-GCLGDVPNPKTGASALHVAAAKGYIKVM 59 (60)
Q Consensus 5 ~qGi~iea~r~~~~~~m--------l~~~~~Ll~~-Gadvn~~~d~~G~TpLH~AA~~G~~evv 59 (60)
.-+|.+|+-+.++|+++ .+.|+.|+.+ |+|+|.. ++.|.||||+||.+|..||+
T Consensus 60 q~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~-tn~G~T~LHyAagK~r~eIa 122 (226)
T KOG4412|consen 60 QPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNAT-TNGGQTCLHYAAGKGRLEIA 122 (226)
T ss_pred cCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCccee-cCCCcceehhhhcCChhhHH
Confidence 45788899999999998 4689999988 9999999 99999999999999999986
No 20
>PHA03100 ankyrin repeat protein; Provisional
Probab=98.79 E-value=4.1e-09 Score=73.34 Aligned_cols=57 Identities=19% Similarity=0.256 Sum_probs=48.3
Q ss_pred hhhcCCChhhccchHHHHH--------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 3 RFVQGINPEDARTFEERSM--------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 3 ~~~qGi~iea~r~~~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
+++.|++++.....+.+++ .+.++.|++.|+|+|.+ +..|.||||+|+.+|+.++++
T Consensus 236 Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~-d~~g~tpl~~A~~~~~~~iv~ 300 (480)
T PHA03100 236 LLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLV-NKYGDTPLHIAILNNNKEIFK 300 (480)
T ss_pred HHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcc-CCCCCcHHHHHHHhCCHHHHH
Confidence 4677888888887777777 46888999999999999 999999999999999888764
No 21
>PHA02859 ankyrin repeat protein; Provisional
Probab=98.79 E-value=5e-09 Score=67.79 Aligned_cols=56 Identities=11% Similarity=-0.021 Sum_probs=33.3
Q ss_pred hhhcCCChhhccchHHHHH----------HHHHHHHHHcCCCCCCCCCCCCCcHHHHH-HhcCCcccc
Q psy9955 3 RFVQGINPEDARTFEERSM----------LEDAKFWLSSGCLGDVPNPKTGASALHVA-AAKGYIKVM 59 (60)
Q Consensus 3 ~~~qGi~iea~r~~~~~~m----------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~A-A~~G~~evv 59 (60)
++++|++++.....+.+++ ++.+++|++.|+++|.+ |..|.||||.+ +.+|+.+++
T Consensus 109 Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~-d~~g~t~Lh~~a~~~~~~~iv 175 (209)
T PHA02859 109 LIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNK-DFDNNNILYSYILFHSDKKIF 175 (209)
T ss_pred HHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccc-cCCCCcHHHHHHHhcCCHHHH
Confidence 3456666666555444433 34666667777777766 66777777743 445565554
No 22
>PHA02791 ankyrin-like protein; Provisional
Probab=98.78 E-value=5e-09 Score=71.48 Aligned_cols=36 Identities=25% Similarity=0.236 Sum_probs=17.3
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCcccc
Q psy9955 23 EDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVM 59 (60)
Q Consensus 23 ~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evv 59 (60)
+.+++|++.|+++|.+ |..|.||||+|+.+|+.++|
T Consensus 75 eiV~lLL~~Gadvn~~-d~~G~TpLh~Aa~~g~~eiv 110 (284)
T PHA02791 75 KIVKILLFSGMDDSQF-DDKGNTALYYAVDSGNMQTV 110 (284)
T ss_pred HHHHHHHHCCCCCCCC-CCCCCCHHHHHHHcCCHHHH
Confidence 3444444444444444 44444444444444444443
No 23
>PHA03095 ankyrin-like protein; Provisional
Probab=98.77 E-value=6.2e-09 Score=72.17 Aligned_cols=57 Identities=16% Similarity=0.162 Sum_probs=45.7
Q ss_pred hhhcCCChhhccchHHHHHH----------HHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 3 RFVQGINPEDARTFEERSML----------EDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 3 ~~~qGi~iea~r~~~~~~ml----------~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
+++.|++++.....+.+++. ..++.|++.|+++|.+ |..|.||||+|+..|+.++|+
T Consensus 208 Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~-d~~g~TpLh~A~~~~~~~~v~ 274 (471)
T PHA03095 208 LIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINAR-NRYGQTPLHYAAVFNNPRACR 274 (471)
T ss_pred HHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCc-CCCCCCHHHHHHHcCCHHHHH
Confidence 45677777777777666652 3567889999999999 899999999999999988764
No 24
>PHA02743 Viral ankyrin protein; Provisional
Probab=98.76 E-value=6.8e-09 Score=65.03 Aligned_cols=34 Identities=21% Similarity=0.283 Sum_probs=21.4
Q ss_pred HHHHHHcCCCCCCCCC-CCCCcHHHHHHhcCCcccc
Q psy9955 25 AKFWLSSGCLGDVPNP-KTGASALHVAAAKGYIKVM 59 (60)
Q Consensus 25 ~~~Ll~~Gadvn~~~d-~~G~TpLH~AA~~G~~evv 59 (60)
+++|++.|+++|.+ + ..|.||||+|+.+|+.+++
T Consensus 76 i~~Ll~~Gadin~~-d~~~g~TpLh~A~~~g~~~iv 110 (166)
T PHA02743 76 IELLVNMGADINAR-ELGTGNTLLHIAASTKNYELA 110 (166)
T ss_pred HHHHHHcCCCCCCC-CCCCCCcHHHHHHHhCCHHHH
Confidence 45666666666666 4 4666666666666666554
No 25
>KOG0515|consensus
Probab=98.76 E-value=4e-09 Score=78.70 Aligned_cols=38 Identities=26% Similarity=0.315 Sum_probs=34.1
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 22 LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 22 l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
.+.|++|++.|++||+. |.+||||||+||..+++-++|
T Consensus 596 yeIVkFLi~~ganVNa~-DSdGWTPLHCAASCNnv~~ck 633 (752)
T KOG0515|consen 596 YEIVKFLIEFGANVNAA-DSDGWTPLHCAASCNNVPMCK 633 (752)
T ss_pred hHHHHHHHhcCCcccCc-cCCCCchhhhhhhcCchHHHH
Confidence 56899999999999999 999999999999888776653
No 26
>KOG0509|consensus
Probab=98.75 E-value=3.9e-09 Score=78.57 Aligned_cols=53 Identities=25% Similarity=0.307 Sum_probs=38.7
Q ss_pred CCChhhccchHHHHH--------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCcccc
Q psy9955 7 GINPEDARTFEERSM--------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVM 59 (60)
Q Consensus 7 Gi~iea~r~~~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evv 59 (60)
|.++.+.++.+-+.+ ++.+|+|+++|||||...-..|.||||+||.+||..+|
T Consensus 68 g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv 128 (600)
T KOG0509|consen 68 GESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHISVV 128 (600)
T ss_pred CcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHH
Confidence 566666655443333 67888888888888888337788888888888888776
No 27
>PHA03100 ankyrin repeat protein; Provisional
Probab=98.75 E-value=1.1e-08 Score=71.18 Aligned_cols=57 Identities=21% Similarity=0.229 Sum_probs=45.8
Q ss_pred hhhcCCChhhccchH------HHHH----------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 3 RFVQGINPEDARTFE------ERSM----------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 3 ~~~qGi~iea~r~~~------~~~m----------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
++++|.+++.....+ .+++ .+.++.|++.|+++|.+ |..|.||||+|+.+|+.++++
T Consensus 195 Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~-d~~g~TpL~~A~~~~~~~iv~ 267 (480)
T PHA03100 195 LLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIK-DVYGFTPLHYAVYNNNPEFVK 267 (480)
T ss_pred HHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCC-CCCCCCHHHHHHHcCCHHHHH
Confidence 456677777655444 3333 66899999999999999 999999999999999998874
No 28
>PHA02989 ankyrin repeat protein; Provisional
Probab=98.75 E-value=6.5e-09 Score=73.80 Aligned_cols=56 Identities=20% Similarity=0.128 Sum_probs=40.5
Q ss_pred hhhcCCChhhccchHHHHH-----------HHHHHHHHHcCCCC-CCCCCCCCCcHHHHHHhc--CCcccc
Q psy9955 3 RFVQGINPEDARTFEERSM-----------LEDAKFWLSSGCLG-DVPNPKTGASALHVAAAK--GYIKVM 59 (60)
Q Consensus 3 ~~~qGi~iea~r~~~~~~m-----------l~~~~~Ll~~Gadv-n~~~d~~G~TpLH~AA~~--G~~evv 59 (60)
++++|+|++.....+.+++ .+.+++|+++|||+ +.. +..|.||||+|+.. ++.++|
T Consensus 94 Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~-d~~g~tpLh~a~~~~~~~~~iv 163 (494)
T PHA02989 94 LLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVK-NSRGYNLLHMYLESFSVKKDVI 163 (494)
T ss_pred HHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCccccc-CCCCCCHHHHHHHhccCCHHHH
Confidence 4577888877777666655 25778888888888 677 88888888887654 466655
No 29
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=98.74 E-value=8e-09 Score=76.73 Aligned_cols=57 Identities=18% Similarity=0.291 Sum_probs=47.6
Q ss_pred hhhcCCChhhccchHHHHH--------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 3 RFVQGINPEDARTFEERSM--------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 3 ~~~qGi~iea~r~~~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
+++.|++++.....+.+++ .+.+++|++.|+++|.. |..|.||||+|+.+|+.++++
T Consensus 101 LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~-d~~G~TpLh~A~~~g~~~iv~ 165 (664)
T PTZ00322 101 LLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLL-DKDGKTPLELAEENGFREVVQ 165 (664)
T ss_pred HHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCC-CCCCCCHHHHHHHCCcHHHHH
Confidence 4667888888877777766 46889999999999998 999999999999999988764
No 30
>KOG4177|consensus
Probab=98.73 E-value=5.4e-09 Score=82.09 Aligned_cols=55 Identities=24% Similarity=0.270 Sum_probs=33.3
Q ss_pred hhcCCChhhccchHHHHH--------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCcccc
Q psy9955 4 FVQGINPEDARTFEERSM--------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVM 59 (60)
Q Consensus 4 ~~qGi~iea~r~~~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evv 59 (60)
+.+|++++.....+-+++ +..|++||++|||++.+ ++.|+||||.||..|+.+|+
T Consensus 527 ~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak-~~~G~TPLH~Aa~~G~~~i~ 589 (1143)
T KOG4177|consen 527 LEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAK-DKLGYTPLHQAAQQGHNDIA 589 (1143)
T ss_pred hhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCcccccc-CCCCCChhhHHHHcChHHHH
Confidence 345555555555555554 34666666666666666 56666666666666666654
No 31
>PHA02743 Viral ankyrin protein; Provisional
Probab=98.73 E-value=1.1e-08 Score=64.13 Aligned_cols=57 Identities=14% Similarity=0.046 Sum_probs=47.1
Q ss_pred hhhcCCChhhcc-chHHHHH--------HHHHHHHHH-cCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 3 RFVQGINPEDAR-TFEERSM--------LEDAKFWLS-SGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 3 ~~~qGi~iea~r-~~~~~~m--------l~~~~~Ll~-~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
+++.|++++... ..+.+++ .+.+++|++ .|++++.. +..|.||||+|+.+|+.++++
T Consensus 79 Ll~~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~-d~~g~tpL~~A~~~~~~~iv~ 145 (166)
T PHA02743 79 LVNMGADINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAI-NYQHETAYHIAYKMRDRRMME 145 (166)
T ss_pred HHHcCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCc-CCCCCCHHHHHHHcCCHHHHH
Confidence 467889998876 3565665 468889995 89999999 999999999999999988763
No 32
>PHA02741 hypothetical protein; Provisional
Probab=98.73 E-value=8.5e-09 Score=64.42 Aligned_cols=37 Identities=22% Similarity=0.210 Sum_probs=26.2
Q ss_pred HHHHHHHHcCCCCCCCCC-CCCCcHHHHHHhcCCccccC
Q psy9955 23 EDAKFWLSSGCLGDVPNP-KTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 23 ~~~~~Ll~~Gadvn~~~d-~~G~TpLH~AA~~G~~evvk 60 (60)
+.++.|++.|+++|.+ + ..|.||||+|+.+|+.++++
T Consensus 78 ~ii~~Ll~~gadin~~-~~~~g~TpLh~A~~~~~~~iv~ 115 (169)
T PHA02741 78 EIIDHLIELGADINAQ-EMLEGDTALHLAAHRRDHDLAE 115 (169)
T ss_pred HHHHHHHHcCCCCCCC-CcCCCCCHHHHHHHcCCHHHHH
Confidence 4566777777777777 5 37777777777777777653
No 33
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=98.73 E-value=8.6e-09 Score=77.60 Aligned_cols=37 Identities=30% Similarity=0.343 Sum_probs=34.4
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 23 EDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 23 ~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
+.++.|+++|+|+|.+ |..|.||||+|+.+|+.++|+
T Consensus 636 ~~v~~Ll~~Gadin~~-d~~G~TpLh~A~~~g~~~iv~ 672 (823)
T PLN03192 636 TAMKELLKQGLNVDSE-DHQGATALQVAMAEDHVDMVR 672 (823)
T ss_pred HHHHHHHHCCCCCCCC-CCCCCCHHHHHHHCCcHHHHH
Confidence 5688999999999999 999999999999999999874
No 34
>PHA02874 ankyrin repeat protein; Provisional
Probab=98.73 E-value=1e-08 Score=71.50 Aligned_cols=57 Identities=25% Similarity=0.285 Sum_probs=48.5
Q ss_pred hhhcCCChhhccchHHHHH--------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 3 RFVQGINPEDARTFEERSM--------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 3 ~~~qGi~iea~r~~~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
++++|++++.....+.+++ .+.++.|++.|+++|.. +..|.||||+|+..|+.++++
T Consensus 143 Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~-~~~g~tpL~~A~~~g~~~iv~ 207 (434)
T PHA02874 143 LFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVK-DNNGESPLHNAAEYGDYACIK 207 (434)
T ss_pred HHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCC-CCCCCCHHHHHHHcCCHHHHH
Confidence 5678888887777666666 56899999999999999 999999999999999998874
No 35
>PHA02946 ankyin-like protein; Provisional
Probab=98.73 E-value=8.5e-09 Score=73.41 Aligned_cols=55 Identities=15% Similarity=0.344 Sum_probs=38.3
Q ss_pred hhcCCChhhccchHHHHH----------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcC--Ccccc
Q psy9955 4 FVQGINPEDARTFEERSM----------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKG--YIKVM 59 (60)
Q Consensus 4 ~~qGi~iea~r~~~~~~m----------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G--~~evv 59 (60)
++.|.+++.....+.+++ .+.++.|++.|+++|.+ |..|.||||+||.+| +.+++
T Consensus 160 l~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~-d~~G~TpLH~Aa~~~~~~~~iv 226 (446)
T PHA02946 160 MSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKP-DHDGNTPLHIVCSKTVKNVDII 226 (446)
T ss_pred HhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCccc-CCCCCCHHHHHHHcCCCcHHHH
Confidence 455666666666555554 24677888888888888 888888888888776 44443
No 36
>KOG0508|consensus
Probab=98.73 E-value=1.9e-09 Score=79.46 Aligned_cols=55 Identities=20% Similarity=0.392 Sum_probs=31.2
Q ss_pred hhcCCChhhccchHHHHH--------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCcccc
Q psy9955 4 FVQGINPEDARTFEERSM--------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVM 59 (60)
Q Consensus 4 ~~qGi~iea~r~~~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evv 59 (60)
+++|++++.+.....+++ ++.+|+|+++|||+++. |+.|.|-||+||++||.+|+
T Consensus 104 ~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~Ia-nrhGhTcLmIa~ykGh~~I~ 166 (615)
T KOG0508|consen 104 LRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIA-NRHGHTCLMIACYKGHVDIA 166 (615)
T ss_pred HHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCccc-ccCCCeeEEeeeccCchHHH
Confidence 455555555555444444 45566666666666665 66666666666666665554
No 37
>PHA02791 ankyrin-like protein; Provisional
Probab=98.72 E-value=1.7e-08 Score=68.85 Aligned_cols=57 Identities=11% Similarity=0.146 Sum_probs=48.6
Q ss_pred hhhcCCChhhccchHHHHH--------HHHHHHHHHcCCCCCCCCCCCCC-cHHHHHHhcCCccccC
Q psy9955 3 RFVQGINPEDARTFEERSM--------LEDAKFWLSSGCLGDVPNPKTGA-SALHVAAAKGYIKVMK 60 (60)
Q Consensus 3 ~~~qGi~iea~r~~~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~-TpLH~AA~~G~~evvk 60 (60)
++..|.+++.....+.+++ .+.+++|++.|+++|.. +..|+ ||||+|+.+|+.++|+
T Consensus 80 LL~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~-~~~g~~TpL~~Aa~~g~~eivk 145 (284)
T PHA02791 80 LLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFY-GKTGWKTSFYHAVMLNDVSIVS 145 (284)
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcc-CCCCCcHHHHHHHHcCCHHHHH
Confidence 4567888888888777777 56999999999999998 88885 8999999999999874
No 38
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=98.70 E-value=1.4e-08 Score=77.26 Aligned_cols=56 Identities=13% Similarity=0.156 Sum_probs=41.1
Q ss_pred hhhcC-CChhhc-cchHHHHH----------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCc--ccc
Q psy9955 3 RFVQG-INPEDA-RTFEERSM----------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYI--KVM 59 (60)
Q Consensus 3 ~~~qG-i~iea~-r~~~~~~m----------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~--evv 59 (60)
++++| +|++.. ...+.+++ .+.+++|+++|+++|.+ |..|.||||+|+.+|+. ++|
T Consensus 161 LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~k-D~~G~TPLH~Aa~~g~~~~eIV 230 (764)
T PHA02716 161 MVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQ-NNHLITPLHTYLITGNVCASVI 230 (764)
T ss_pred HHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCC-CCCCCCHHHHHHHcCCCCHHHH
Confidence 46677 788776 44444444 25788888888888888 88888888888888864 555
No 39
>PHA02878 ankyrin repeat protein; Provisional
Probab=98.68 E-value=1.6e-08 Score=71.31 Aligned_cols=57 Identities=18% Similarity=0.236 Sum_probs=45.5
Q ss_pred hhhcCCChhhccchHHHHH--------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhc-CCccccC
Q psy9955 3 RFVQGINPEDARTFEERSM--------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAK-GYIKVMK 60 (60)
Q Consensus 3 ~~~qGi~iea~r~~~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~-G~~evvk 60 (60)
+++.|.+++.....+.+++ .+.++.|++.|+++|.+ |..|.||||+|+.. ++.++++
T Consensus 187 Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~-d~~g~TpLh~A~~~~~~~~iv~ 252 (477)
T PHA02878 187 LLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDAR-DKCGNTPLHISVGYCKDYDILK 252 (477)
T ss_pred HHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCC-CCCCCCHHHHHHHhcCCHHHHH
Confidence 4567888887777776666 45889999999999998 89999999999975 6777653
No 40
>PHA02736 Viral ankyrin protein; Provisional
Probab=98.67 E-value=2.1e-08 Score=61.26 Aligned_cols=38 Identities=18% Similarity=0.168 Sum_probs=33.5
Q ss_pred HHHHHHHHHcCCCCCCCCC-CCCCcHHHHHHhcCCccccC
Q psy9955 22 LEDAKFWLSSGCLGDVPNP-KTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 22 l~~~~~Ll~~Gadvn~~~d-~~G~TpLH~AA~~G~~evvk 60 (60)
.+.+++|++.|+++|.+ + ..|.||||+|+.+|+.++++
T Consensus 71 ~e~v~~Ll~~gadin~~-~~~~g~T~Lh~A~~~~~~~i~~ 109 (154)
T PHA02736 71 QEKLKLLMEWGADINGK-ERVFGNTPLHIAVYTQNYELAT 109 (154)
T ss_pred HHHHHHHHHcCCCcccc-CCCCCCcHHHHHHHhCCHHHHH
Confidence 35688999999999999 6 69999999999999988763
No 41
>PHA02859 ankyrin repeat protein; Provisional
Probab=98.67 E-value=2.2e-08 Score=64.81 Aligned_cols=57 Identities=19% Similarity=0.157 Sum_probs=42.6
Q ss_pred hhhcCCChhhcc-chHHHHH-----------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHh--cCCccccC
Q psy9955 3 RFVQGINPEDAR-TFEERSM-----------LEDAKFWLSSGCLGDVPNPKTGASALHVAAA--KGYIKVMK 60 (60)
Q Consensus 3 ~~~qGi~iea~r-~~~~~~m-----------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~--~G~~evvk 60 (60)
++++|.+++... ..+.+++ .+.+++|+++|+++|.. |..|.||||+|+. +|+.++++
T Consensus 72 Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~-d~~G~TpLh~a~~~~~~~~~iv~ 142 (209)
T PHA02859 72 LIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEE-DEDGKNLLHMYMCNFNVRINVIK 142 (209)
T ss_pred HHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCc-CCCCCCHHHHHHHhccCCHHHHH
Confidence 457788887764 2333332 45788899999999999 9999999999876 46777763
No 42
>KOG0505|consensus
Probab=98.67 E-value=9e-09 Score=75.73 Aligned_cols=57 Identities=25% Similarity=0.402 Sum_probs=48.7
Q ss_pred hhhcCCChhhccchHHHHH--------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 3 RFVQGINPEDARTFEERSM--------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 3 ~~~qGi~iea~r~~~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
++..|++++.+..-+.+.+ .++|++|+++|++||.. |..|+||||.||..||..+++
T Consensus 59 ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~-d~e~wtPlhaaascg~~~i~~ 123 (527)
T KOG0505|consen 59 LLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQ-DNEGWTPLHAAASCGYLNIVE 123 (527)
T ss_pred HhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCcccc-ccccCCcchhhcccccHHHHH
Confidence 5667777777776666666 56999999999999999 999999999999999998864
No 43
>PHA02741 hypothetical protein; Provisional
Probab=98.64 E-value=2.9e-08 Score=62.02 Aligned_cols=57 Identities=11% Similarity=0.081 Sum_probs=46.7
Q ss_pred hhhcCCChhhccc-hHHHHH--------HHHHHHHHH-cCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 3 RFVQGINPEDART-FEERSM--------LEDAKFWLS-SGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 3 ~~~qGi~iea~r~-~~~~~m--------l~~~~~Ll~-~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
++..|.+++.... .+.+++ .+.+++|++ .|++++.. |..|.||||+|+.+|+.++++
T Consensus 83 Ll~~gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~-n~~g~tpL~~A~~~~~~~iv~ 149 (169)
T PHA02741 83 LIELGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFC-NADNKSPFELAIDNEDVAMMQ 149 (169)
T ss_pred HHHcCCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcC-CCCCCCHHHHHHHCCCHHHHH
Confidence 3457888887764 566666 468899997 59999999 999999999999999988764
No 44
>PHA02876 ankyrin repeat protein; Provisional
Probab=98.63 E-value=2.6e-08 Score=72.97 Aligned_cols=38 Identities=24% Similarity=0.257 Sum_probs=32.4
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 22 LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 22 l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
++.+++|++.|+++|.+ |..|.||||+||.+|+.++|+
T Consensus 158 ~~i~k~Ll~~Gadvn~~-d~~G~TpLh~Aa~~G~~~iv~ 195 (682)
T PHA02876 158 LLIAEMLLEGGADVNAK-DIYCITPIHYAAERGNAKMVN 195 (682)
T ss_pred HHHHHHHHhCCCCCCCC-CCCCCCHHHHHHHCCCHHHHH
Confidence 45788889999999988 888999999999999888774
No 45
>PHA02730 ankyrin-like protein; Provisional
Probab=98.62 E-value=2.6e-08 Score=75.10 Aligned_cols=38 Identities=16% Similarity=0.214 Sum_probs=34.1
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcC--CccccC
Q psy9955 22 LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKG--YIKVMK 60 (60)
Q Consensus 22 l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G--~~evvk 60 (60)
.+.+++||++|||+|+. |..|.||||+||..| +.|+|+
T Consensus 57 ~eivklLLs~GAdin~k-D~~G~TPLh~Aa~~~~~~~eIv~ 96 (672)
T PHA02730 57 IKIVRLLLSRGVERLCR-NNEGLTPLGVYSKRKYVKSQIVH 96 (672)
T ss_pred HHHHHHHHhCCCCCccc-CCCCCChHHHHHHcCCCcHHHHH
Confidence 36899999999999999 999999999999977 687764
No 46
>KOG0514|consensus
Probab=98.61 E-value=2e-08 Score=72.25 Aligned_cols=37 Identities=27% Similarity=0.371 Sum_probs=35.5
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 23 EDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 23 ~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
+.++.||..|||||++ |.+|.|+|+.||..||.||||
T Consensus 354 d~vk~LLacgAdVNiQ-DdDGSTALMCA~EHGhkEivk 390 (452)
T KOG0514|consen 354 DMVKALLACGADVNIQ-DDDGSTALMCAAEHGHKEIVK 390 (452)
T ss_pred HHHHHHHHccCCCccc-cCCccHHHhhhhhhChHHHHH
Confidence 5899999999999999 999999999999999999985
No 47
>PHA02917 ankyrin-like protein; Provisional
Probab=98.61 E-value=3.9e-08 Score=73.43 Aligned_cols=38 Identities=21% Similarity=0.153 Sum_probs=34.3
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCc--cccC
Q psy9955 22 LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYI--KVMK 60 (60)
Q Consensus 22 l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~--evvk 60 (60)
.+.+++|++.|||+|.. |..|.||||+|+.+|+. |+||
T Consensus 209 ~eiv~~Li~~Gadvn~~-d~~G~TpLh~A~~~g~~~~eivk 248 (661)
T PHA02917 209 PEVVKCLINHGIKPSSI-DKNYCTALQYYIKSSHIDIDIVK 248 (661)
T ss_pred HHHHHHHHHCCCCcccC-CCCCCcHHHHHHHcCCCcHHHHH
Confidence 36899999999999999 99999999999999996 4654
No 48
>KOG0508|consensus
Probab=98.61 E-value=1.2e-08 Score=75.25 Aligned_cols=57 Identities=23% Similarity=0.384 Sum_probs=44.7
Q ss_pred hhhcCCChhhccchHHHHH--------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 3 RFVQGINPEDARTFEERSM--------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 3 ~~~qGi~iea~r~~~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
+++.|.|++-+.+-+-+-+ .+.+++|++.|||+|.+ +..|+|+||.+|..|++|++|
T Consensus 136 LvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~k-s~kGNTALH~caEsG~vdivq 200 (615)
T KOG0508|consen 136 LVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAK-SYKGNTALHDCAESGSVDIVQ 200 (615)
T ss_pred HHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchh-cccCchHHHhhhhcccHHHHH
Confidence 4567777777777655544 46888888888888888 888888888888888888874
No 49
>KOG4177|consensus
Probab=98.58 E-value=4.4e-08 Score=77.06 Aligned_cols=57 Identities=21% Similarity=0.338 Sum_probs=52.6
Q ss_pred hhhcCCChhhccchHHHHH--------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 3 RFVQGINPEDARTFEERSM--------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 3 ~~~qGi~iea~r~~~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
++++|.|+.+.+..+.+++ -+++.+|+++||++|+. |..|.||||+|++.||++++|
T Consensus 559 LLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~-d~~g~TpL~iA~~lg~~~~~k 623 (1143)
T KOG4177|consen 559 LLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAA-DLDGFTPLHIAVRLGYLSVVK 623 (1143)
T ss_pred hhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcc-cccCcchhHHHHHhcccchhh
Confidence 5789999999999888887 45899999999999999 999999999999999999875
No 50
>PHA02795 ankyrin-like protein; Provisional
Probab=98.57 E-value=5.1e-08 Score=70.52 Aligned_cols=38 Identities=24% Similarity=0.132 Sum_probs=35.8
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 22 LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 22 l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
++.+++|+++|||+|.+ |..|.||||+|+.+|+.++|+
T Consensus 201 ~eIve~LIs~GADIN~k-D~~G~TpLh~Aa~~g~~eiVe 238 (437)
T PHA02795 201 LEIYKLCIPYIEDINQL-DAGGRTLLYRAIYAGYIDLVS 238 (437)
T ss_pred HHHHHHHHhCcCCcCcC-CCCCCCHHHHHHHcCCHHHHH
Confidence 58999999999999999 999999999999999999874
No 51
>PHA02884 ankyrin repeat protein; Provisional
Probab=98.56 E-value=7e-08 Score=66.70 Aligned_cols=55 Identities=11% Similarity=0.024 Sum_probs=45.0
Q ss_pred hhhcCCChhhcc-chHHHHH--------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccc
Q psy9955 3 RFVQGINPEDAR-TFEERSM--------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKV 58 (60)
Q Consensus 3 ~~~qGi~iea~r-~~~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~ev 58 (60)
++++|.|++.-. ..+.+++ .+.+++|++.|+++|.. |..|.||||.|+.+++.++
T Consensus 89 LL~~GADVN~~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~k-d~~G~TpL~~A~~~~~~~~ 152 (300)
T PHA02884 89 LIRYGADVNRYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQ-TNDMVTPIELALMICNNFL 152 (300)
T ss_pred HHHcCCCcCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-CCCCCCHHHHHHHhCChhH
Confidence 568899999743 3455555 46899999999999999 9999999999998876654
No 52
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=98.56 E-value=4.5e-08 Score=74.59 Aligned_cols=49 Identities=16% Similarity=0.188 Sum_probs=40.3
Q ss_pred CCChhhccchHHHHHH-------------HHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCc
Q psy9955 7 GINPEDARTFEERSML-------------EDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYI 56 (60)
Q Consensus 7 Gi~iea~r~~~~~~ml-------------~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~ 56 (60)
++++++....+.+++. +.+++|++.|+|+|.+ |..|.||||+|+.+|+.
T Consensus 487 ~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GADIN~~-d~~G~TPLh~A~~~g~~ 548 (764)
T PHA02716 487 RYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQYNINIP-TKNGVTPLMLTMRNNRL 548 (764)
T ss_pred hccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCCCCCccc-CCCCCCHHHHHHHcCCc
Confidence 4455666666666663 3459999999999999 99999999999999987
No 53
>PHA02917 ankyrin-like protein; Provisional
Probab=98.55 E-value=5.9e-08 Score=72.46 Aligned_cols=57 Identities=18% Similarity=0.117 Sum_probs=45.8
Q ss_pred hhhhcCCChhhccchHHHHH-----------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCcccc
Q psy9955 2 QRFVQGINPEDARTFEERSM-----------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVM 59 (60)
Q Consensus 2 ~~~~qGi~iea~r~~~~~~m-----------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evv 59 (60)
|++.+|.++++....+.+++ .+.+++||+.|+++|.. +..|.||||.|+.+|+.+++
T Consensus 17 ~l~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~-~~~g~TpL~~Aa~~g~~~v~ 84 (661)
T PHA02917 17 QMLRDRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHK-NWRQLTPLEEYTNSRHVKVN 84 (661)
T ss_pred HHHhccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCcccc-CCCCCCHHHHHHHcCChhHH
Confidence 45667777766565555554 36899999999999999 99999999999999997764
No 54
>PHA02876 ankyrin repeat protein; Provisional
Probab=98.54 E-value=6.8e-08 Score=70.82 Aligned_cols=57 Identities=16% Similarity=0.144 Sum_probs=51.0
Q ss_pred hhhcCCChhhccchHHHHH--------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 3 RFVQGINPEDARTFEERSM--------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 3 ~~~qGi~iea~r~~~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
+++.|+++++....+.+++ .+.+++|++.|+++|.. +..|.||||.|+..|+.+++|
T Consensus 164 Ll~~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~-~~~g~t~L~~A~~~~~~~ivk 228 (682)
T PHA02876 164 LLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNII-ALDDLSVLECAVDSKNIDTIK 228 (682)
T ss_pred HHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCcc-CCCCCCHHHHHHHcCCHHHHH
Confidence 5678999999888888887 46899999999999999 999999999999999988764
No 55
>PHA02875 ankyrin repeat protein; Provisional
Probab=98.54 E-value=4.8e-08 Score=67.29 Aligned_cols=36 Identities=31% Similarity=0.391 Sum_probs=19.9
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCcccc
Q psy9955 23 EDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVM 59 (60)
Q Consensus 23 ~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evv 59 (60)
+.+++|++.|++++.. +..|.||||.|+.+|+.++|
T Consensus 49 ~~v~~Ll~~ga~~~~~-~~~~~t~L~~A~~~g~~~~v 84 (413)
T PHA02875 49 EAIKLLMKHGAIPDVK-YPDIESELHDAVEEGDVKAV 84 (413)
T ss_pred HHHHHHHhCCCCcccc-CCCcccHHHHHHHCCCHHHH
Confidence 3555555555555555 55555555555555555544
No 56
>KOG0512|consensus
Probab=98.52 E-value=6.9e-08 Score=64.34 Aligned_cols=38 Identities=21% Similarity=0.254 Sum_probs=33.5
Q ss_pred HHHHHHHHHcCCC-CCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 22 LEDAKFWLSSGCL-GDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 22 l~~~~~Ll~~Gad-vn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
+..|+.||+..++ ||.+ |.+|.||||.||++||++||+
T Consensus 76 l~eV~~lL~e~an~vNtr-D~D~YTpLHRAaYn~h~div~ 114 (228)
T KOG0512|consen 76 LTEVQRLLSEKANHVNTR-DEDEYTPLHRAAYNGHLDIVH 114 (228)
T ss_pred HHHHHHHHHhcccccccc-ccccccHHHHHHhcCchHHHH
Confidence 5578889988887 5999 999999999999999999874
No 57
>PF13606 Ank_3: Ankyrin repeat
Probab=98.51 E-value=3.2e-08 Score=47.46 Aligned_cols=19 Identities=42% Similarity=0.796 Sum_probs=17.5
Q ss_pred CCCcHHHHHHhcCCccccC
Q psy9955 42 TGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 42 ~G~TpLH~AA~~G~~evvk 60 (60)
+|+||||+||.+|+.|+||
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~ 19 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVK 19 (30)
T ss_pred CCCCHHHHHHHhCCHHHHH
Confidence 5899999999999999975
No 58
>KOG0509|consensus
Probab=98.46 E-value=1.3e-07 Score=70.67 Aligned_cols=52 Identities=23% Similarity=0.274 Sum_probs=24.6
Q ss_pred hhhcCCChhhccchHHHHH--------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCC
Q psy9955 3 RFVQGINPEDARTFEERSM--------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGY 55 (60)
Q Consensus 3 ~~~qGi~iea~r~~~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~ 55 (60)
+++.|+|++..+..+.+.+ .--+.+||..|+|+|.+ |..|+||||+||.+|+
T Consensus 131 LlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~-D~~grTpLmwAaykg~ 190 (600)
T KOG0509|consen 131 LLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLR-DNNGRTPLMWAAYKGF 190 (600)
T ss_pred HHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCc-CCCCCCHHHHHHHhcc
Confidence 3444555555555444443 12334444445555554 5555555555554444
No 59
>KOG0195|consensus
Probab=98.45 E-value=4.5e-08 Score=69.47 Aligned_cols=56 Identities=16% Similarity=0.186 Sum_probs=45.2
Q ss_pred hhhcCCChhhccchHHHHH--------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCcccc
Q psy9955 3 RFVQGINPEDARTFEERSM--------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVM 59 (60)
Q Consensus 3 ~~~qGi~iea~r~~~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evv 59 (60)
++.+|.-+++......+.+ -+.++.||+..+|||+. +++|.||||+||+-||..|+
T Consensus 53 ll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnav-nehgntplhyacfwgydqia 116 (448)
T KOG0195|consen 53 LLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAV-NEHGNTPLHYACFWGYDQIA 116 (448)
T ss_pred HHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchh-hccCCCchhhhhhhcHHHHH
Confidence 4567777777766554444 35899999999999999 99999999999999997764
No 60
>PHA02730 ankyrin-like protein; Provisional
Probab=98.43 E-value=1.3e-07 Score=71.28 Aligned_cols=36 Identities=11% Similarity=-0.105 Sum_probs=30.6
Q ss_pred HHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 24 DAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 24 ~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
.+++|++.|||+|.. |..|.||||+|+.+|+.++++
T Consensus 444 ivk~LIs~GADINak-D~~G~TPLh~Aa~~~~~eive 479 (672)
T PHA02730 444 VFDILSKYMDDIDMI-DNENKTLLYYAVDVNNIQFAR 479 (672)
T ss_pred HHHHHHhcccchhcc-CCCCCCHHHHHHHhCCHHHHH
Confidence 478899999999998 899999999999888877653
No 61
>PHA02792 ankyrin-like protein; Provisional
Probab=98.40 E-value=2.2e-07 Score=69.81 Aligned_cols=57 Identities=12% Similarity=-0.069 Sum_probs=43.0
Q ss_pred hhhcCCChhhccchH--HHHH-----------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 3 RFVQGINPEDARTFE--ERSM-----------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 3 ~~~qGi~iea~r~~~--~~~m-----------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
+++.|++++.....+ .+++ .+.+++|+++|||+|.+ |..|.||||+|+.+|+.++++
T Consensus 358 LIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~k-D~~G~TPLh~Aa~~~n~eive 427 (631)
T PHA02792 358 ILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINKI-DKHGRSILYYCIESHSVSLVE 427 (631)
T ss_pred HHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCccccc-cccCcchHHHHHHcCCHHHHH
Confidence 457788887766542 2332 23478888999999998 999999999999999887763
No 62
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=98.37 E-value=3e-07 Score=68.43 Aligned_cols=38 Identities=26% Similarity=0.457 Sum_probs=35.0
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 22 LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 22 l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
.+.++.|++.|+++|.. |..|.||||+||.+|+.++|+
T Consensus 95 ~~~vk~LL~~Gadin~~-d~~G~TpLh~Aa~~g~~eiv~ 132 (664)
T PTZ00322 95 AVGARILLTGGADPNCR-DYDGRTPLHIACANGHVQVVR 132 (664)
T ss_pred HHHHHHHHHCCCCCCCc-CCCCCcHHHHHHHCCCHHHHH
Confidence 35789999999999999 999999999999999999874
No 63
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.35 E-value=1.3e-07 Score=45.41 Aligned_cols=19 Identities=37% Similarity=0.606 Sum_probs=17.2
Q ss_pred CCCcHHHHHHhcCCccccC
Q psy9955 42 TGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 42 ~G~TpLH~AA~~G~~evvk 60 (60)
+|.||||+||.+|+.++++
T Consensus 1 dG~TpLh~A~~~~~~~~v~ 19 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVK 19 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHH
T ss_pred CcccHHHHHHHHHHHHHHH
Confidence 5899999999999999874
No 64
>KOG1710|consensus
Probab=98.34 E-value=4.3e-07 Score=64.25 Aligned_cols=38 Identities=24% Similarity=0.108 Sum_probs=35.0
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCcccc
Q psy9955 22 LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVM 59 (60)
Q Consensus 22 l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evv 59 (60)
++.+++||+.|+|||...+.++.||||+||-.|+.+|.
T Consensus 58 l~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvc 95 (396)
T KOG1710|consen 58 LTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVC 95 (396)
T ss_pred HHHHHHHHHhCCCcCcccccccccHHHHHHHcCCchHH
Confidence 56899999999999998899999999999999999874
No 65
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=98.29 E-value=7.6e-07 Score=53.93 Aligned_cols=55 Identities=22% Similarity=0.402 Sum_probs=41.0
Q ss_pred hhcCCChhhccchHHHHH-------------HHHHHHHHHcCC---CCCCCCCCCCCcHHHHHHhcCCcccc
Q psy9955 4 FVQGINPEDARTFEERSM-------------LEDAKFWLSSGC---LGDVPNPKTGASALHVAAAKGYIKVM 59 (60)
Q Consensus 4 ~~qGi~iea~r~~~~~~m-------------l~~~~~Ll~~Ga---dvn~~~d~~G~TpLH~AA~~G~~evv 59 (60)
...|++++.....+.+.+ .+.+++|++.|+ +.+.+ +..|.||||+|+.+|+.+++
T Consensus 93 ~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~-~~~g~tpl~~A~~~~~~~~~ 163 (235)
T COG0666 93 LASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLR-DEDGNTPLHWAALNGDADIV 163 (235)
T ss_pred HHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCcccc-CCCCCchhHHHHHcCchHHH
Confidence 445666655444444443 467999999999 44555 99999999999999998775
No 66
>KOG0502|consensus
Probab=98.29 E-value=2.3e-07 Score=63.66 Aligned_cols=57 Identities=16% Similarity=0.240 Sum_probs=42.6
Q ss_pred hhhcCCChhhccchHHHHH--------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 3 RFVQGINPEDARTFEERSM--------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 3 ~~~qGi~iea~r~~~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
++..|.|+++.....++.+ .+.|++||..+.|||+- |-+|.|||-+|+..||.++||
T Consensus 179 LL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvy-DwNGgTpLlyAvrgnhvkcve 243 (296)
T KOG0502|consen 179 LLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVY-DWNGGTPLLYAVRGNHVKCVE 243 (296)
T ss_pred HHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCccee-ccCCCceeeeeecCChHHHHH
Confidence 3456777777776666665 45778888888888887 888888888888888887764
No 67
>KOG0512|consensus
Probab=98.26 E-value=6.3e-07 Score=59.80 Aligned_cols=53 Identities=23% Similarity=0.166 Sum_probs=42.9
Q ss_pred hhhcCCChhhccchHHHHH--------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCc
Q psy9955 3 RFVQGINPEDARTFEERSM--------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYI 56 (60)
Q Consensus 3 ~~~qGi~iea~r~~~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~ 56 (60)
++-+|.+.++....+|+++ .+++-+||+.|+|||+. ...-.||||+||-+.+.
T Consensus 116 ll~~gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqhgaDVnA~-t~g~ltpLhlaa~~rn~ 176 (228)
T KOG0512|consen 116 LLLSGANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGADVNAQ-TKGLLTPLHLAAGNRNS 176 (228)
T ss_pred HHHccCCcccccccCccchhhhhcccchhHHHHHHhccCccccc-ccccchhhHHhhcccch
Confidence 3457888888888888888 45888899999999998 88889999999866543
No 68
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=98.25 E-value=1e-06 Score=49.14 Aligned_cols=34 Identities=41% Similarity=0.597 Sum_probs=30.1
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 22 LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 22 l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
++.++.|++.|.+++. |.||||+||.+|+.+++|
T Consensus 10 ~~~~~~ll~~~~~~~~-----~~~~l~~A~~~~~~~~~~ 43 (89)
T PF12796_consen 10 LEILKFLLEKGADINL-----GNTALHYAAENGNLEIVK 43 (89)
T ss_dssp HHHHHHHHHTTSTTTS-----SSBHHHHHHHTTTHHHHH
T ss_pred HHHHHHHHHCcCCCCC-----CCCHHHHHHHcCCHHHHH
Confidence 6779999999988765 889999999999999874
No 69
>KOG4214|consensus
Probab=98.04 E-value=3.8e-06 Score=51.34 Aligned_cols=38 Identities=26% Similarity=0.209 Sum_probs=35.8
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 22 LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 22 l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
++.+.+|+..||+++.+ |+.|-|||--|...||.++||
T Consensus 47 l~ilefli~iGA~i~~k-DKygITPLLsAvwEGH~~cVk 84 (117)
T KOG4214|consen 47 LSILEFLISIGANIQDK-DKYGITPLLSAVWEGHRDCVK 84 (117)
T ss_pred HHHHHHHHHhccccCCc-cccCCcHHHHHHHHhhHHHHH
Confidence 67889999999999999 999999999999999999885
No 70
>PHA02792 ankyrin-like protein; Provisional
Probab=98.00 E-value=5.9e-06 Score=62.21 Aligned_cols=49 Identities=6% Similarity=0.062 Sum_probs=43.2
Q ss_pred hhhcCCChhhccchHHHHH--------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHh
Q psy9955 3 RFVQGINPEDARTFEERSM--------LEDAKFWLSSGCLGDVPNPKTGASALHVAAA 52 (60)
Q Consensus 3 ~~~qGi~iea~r~~~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~ 52 (60)
+++.|.|+++....+++++ .+.+++|++.|+++|.. +..|.||||+|+.
T Consensus 396 LIs~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~k-D~~G~TpL~~A~~ 452 (631)
T PHA02792 396 CKPYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINIT-TKYGSTCIGICVI 452 (631)
T ss_pred HHhcCCccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCc-CCCCCCHHHHHHH
Confidence 3578899999888888887 45789999999999999 9999999999975
No 71
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=97.95 E-value=1.1e-05 Score=45.08 Aligned_cols=36 Identities=33% Similarity=0.471 Sum_probs=23.6
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCcccc
Q psy9955 23 EDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVM 59 (60)
Q Consensus 23 ~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evv 59 (60)
+.++.|++.|++++.. +..|.||+|.|+..|+.+++
T Consensus 54 ~~~~~ll~~~~~~~~~-~~~~~~~l~~a~~~~~~~~~ 89 (126)
T cd00204 54 EIVKLLLEKGADVNAR-DKDGNTPLHLAARNGNLDVV 89 (126)
T ss_pred HHHHHHHHcCCCcccc-CCCCCCHHHHHHHcCcHHHH
Confidence 4666666667666666 66666777777766665554
No 72
>KOG0818|consensus
Probab=97.89 E-value=1.2e-05 Score=60.03 Aligned_cols=35 Identities=40% Similarity=0.526 Sum_probs=30.8
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCc
Q psy9955 22 LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYI 56 (60)
Q Consensus 22 l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~ 56 (60)
++..-.||..||++|..|+.+|.||||+||..|..
T Consensus 146 let~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~ 180 (669)
T KOG0818|consen 146 LETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQI 180 (669)
T ss_pred HHHHHHHHHcccccCCCCcccCCchhHHHHhccch
Confidence 56677888999999999999999999999998865
No 73
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=97.88 E-value=1.4e-05 Score=48.32 Aligned_cols=35 Identities=34% Similarity=0.438 Sum_probs=31.8
Q ss_pred HHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCC-----cccc
Q psy9955 24 DAKFWLSSGCLGDVPNPKTGASALHVAAAKGY-----IKVM 59 (60)
Q Consensus 24 ~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~-----~evv 59 (60)
.++.++..|++++.. +..|.||||+|+.+|+ .+++
T Consensus 88 ~~~~l~~~~~~~~~~-~~~g~t~l~~a~~~~~~~~~~~~~~ 127 (235)
T COG0666 88 IVKLLLASGADVNAK-DADGDTPLHLAALNGNPPEGNIEVA 127 (235)
T ss_pred HHHHHHHcCCCcccc-cCCCCcHHHHHHhcCCcccchHHHH
Confidence 458999999999999 9999999999999999 6665
No 74
>KOG0502|consensus
Probab=97.87 E-value=8.1e-06 Score=56.19 Aligned_cols=54 Identities=15% Similarity=0.102 Sum_probs=48.9
Q ss_pred hhhcCCChhhccchHHHHH--------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCcc
Q psy9955 3 RFVQGINPEDARTFEERSM--------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIK 57 (60)
Q Consensus 3 ~~~qGi~iea~r~~~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~e 57 (60)
++.+++|++..+-.+.+++ .++++.||++|||++.. +..|.+++-.|.+.||..
T Consensus 212 LL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e-~dsGy~~mdlAValGyr~ 273 (296)
T KOG0502|consen 212 LLTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQE-DDSGYWIMDLAVALGYRI 273 (296)
T ss_pred HHhcCCCcceeccCCCceeeeeecCChHHHHHHHHhcCCCcccc-cccCCcHHHHHHHhhhHH
Confidence 5678999999998888887 46999999999999999 999999999999999973
No 75
>KOG0510|consensus
Probab=97.83 E-value=1e-05 Score=62.67 Aligned_cols=37 Identities=30% Similarity=0.258 Sum_probs=30.8
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCcccc
Q psy9955 22 LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVM 59 (60)
Q Consensus 22 l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evv 59 (60)
.+.+..|+..|+++|.+ +.++.||||+||..|..+.|
T Consensus 286 ~~svd~Ll~~Ga~I~~k-n~d~~spLH~AA~yg~~ntv 322 (929)
T KOG0510|consen 286 PESVDNLLGFGASINSK-NKDEESPLHFAAIYGRINTV 322 (929)
T ss_pred hhHHHHHHHcCCccccc-CCCCCCchHHHHHcccHHHH
Confidence 56788888888888888 88888888888888877665
No 76
>KOG0510|consensus
Probab=97.82 E-value=1.1e-05 Score=62.50 Aligned_cols=36 Identities=25% Similarity=0.327 Sum_probs=31.6
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccc
Q psy9955 22 LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKV 58 (60)
Q Consensus 22 l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~ev 58 (60)
.+..+.|++.|+|||.. |..|.||||.||..++.|.
T Consensus 134 ~s~L~~Ll~~~~dvnl~-de~~~TpLh~A~~~~~~E~ 169 (929)
T KOG0510|consen 134 YSCLKLLLDYGADVNLE-DENGFTPLHLAARKNKVEA 169 (929)
T ss_pred HHHHHHHHHhcCCcccc-ccCCCchhhHHHhcChHHH
Confidence 56888999999999998 9999999999999988774
No 77
>KOG0195|consensus
Probab=97.72 E-value=2.5e-05 Score=55.72 Aligned_cols=37 Identities=24% Similarity=0.309 Sum_probs=34.0
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCcccc
Q psy9955 22 LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVM 59 (60)
Q Consensus 22 l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evv 59 (60)
...++.||..|+-||+. +.-.-||||.||+.||.+||
T Consensus 47 ~aivemll~rgarvn~t-nmgddtplhlaaahghrdiv 83 (448)
T KOG0195|consen 47 VAIVEMLLSRGARVNST-NMGDDTPLHLAAAHGHRDIV 83 (448)
T ss_pred HHHHHHHHhcccccccc-cCCCCcchhhhhhcccHHHH
Confidence 34689999999999999 99899999999999999987
No 78
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=97.71 E-value=3e-05 Score=57.70 Aligned_cols=39 Identities=26% Similarity=0.232 Sum_probs=33.1
Q ss_pred HHHHHHHHHcCCCCCCCCC-------------CCCCcHHHHHHhcCCccccC
Q psy9955 22 LEDAKFWLSSGCLGDVPNP-------------KTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 22 l~~~~~Ll~~Gadvn~~~d-------------~~G~TpLH~AA~~G~~evvk 60 (60)
.+.++.|+++||++|.+.. ..|.||||+|++.|+.++++
T Consensus 141 ~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~ 192 (743)
T TIGR00870 141 YEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVA 192 (743)
T ss_pred HHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHH
Confidence 5799999999999997521 36999999999999998864
No 79
>KOG0511|consensus
Probab=97.63 E-value=3.7e-05 Score=56.09 Aligned_cols=46 Identities=20% Similarity=0.264 Sum_probs=42.3
Q ss_pred hhhccchHHHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 10 PEDARTFEERSMLEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 10 iea~r~~~~~~ml~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
.+++|.+. ++.++.|++.|.+||+. |+....||.+|+-.||.++||
T Consensus 41 ceacR~GD----~d~v~~LVetgvnVN~v-D~fD~spL~lAsLcGHe~vvk 86 (516)
T KOG0511|consen 41 CEACRAGD----VDRVRYLVETGVNVNAV-DRFDSSPLYLASLCGHEDVVK 86 (516)
T ss_pred HHHhhccc----HHHHHHHHHhCCCcchh-hcccccHHHHHHHcCcHHHHH
Confidence 46777777 88999999999999999 999999999999999999886
No 80
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=97.56 E-value=4.1e-05 Score=56.98 Aligned_cols=38 Identities=21% Similarity=0.178 Sum_probs=31.1
Q ss_pred HHHHHHHHHc--CCCCCCCCCCCCCcHHH-HHHhcCCccccC
Q psy9955 22 LEDAKFWLSS--GCLGDVPNPKTGASALH-VAAAKGYIKVMK 60 (60)
Q Consensus 22 l~~~~~Ll~~--Gadvn~~~d~~G~TpLH-~AA~~G~~evvk 60 (60)
++.++.+++. +.++|+. |..|.|||| .|+.+++.++++
T Consensus 30 ~~~v~~lL~~~~~~~in~~-d~~G~t~Lh~~A~~~~~~eiv~ 70 (743)
T TIGR00870 30 LASVYRDLEEPKKLNINCP-DRLGRSALFVAAIENENLELTE 70 (743)
T ss_pred HHHHHHHhccccccCCCCc-CccchhHHHHHHHhcChHHHHH
Confidence 4577888888 8899988 899999999 777888877763
No 81
>KOG0506|consensus
Probab=97.51 E-value=3.6e-05 Score=57.29 Aligned_cols=38 Identities=32% Similarity=0.364 Sum_probs=34.6
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 22 LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 22 l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
+..++.+.-+|.|++.. |-+.+|+||+||+.||.+++|
T Consensus 519 ~~alrRf~l~g~D~~~~-DyD~RTaLHvAAaEG~v~v~k 556 (622)
T KOG0506|consen 519 LSALRRFALQGMDLETK-DYDDRTALHVAAAEGHVEVVK 556 (622)
T ss_pred HHHHHHHHHhccccccc-ccccchhheeecccCceeHHH
Confidence 55788899999999999 999999999999999999875
No 82
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=97.49 E-value=0.00016 Score=40.31 Aligned_cols=37 Identities=30% Similarity=0.486 Sum_probs=33.1
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCcccc
Q psy9955 22 LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVM 59 (60)
Q Consensus 22 l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evv 59 (60)
.+.++.|++.|.+.+.. +..|.||||.|+.++..+++
T Consensus 20 ~~~i~~li~~~~~~~~~-~~~g~~~l~~a~~~~~~~~~ 56 (126)
T cd00204 20 LEVVKLLLENGADVNAK-DNDGRTPLHLAAKNGHLEIV 56 (126)
T ss_pred HHHHHHHHHcCCCCCcc-CCCCCcHHHHHHHcCCHHHH
Confidence 36789999999999888 99999999999999988765
No 83
>KOG0783|consensus
Probab=97.43 E-value=8e-05 Score=58.54 Aligned_cols=37 Identities=27% Similarity=0.254 Sum_probs=33.7
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCcccc
Q psy9955 23 EDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVM 59 (60)
Q Consensus 23 ~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evv 59 (60)
..++.||++|+|+++++-+.|+||||.|-+.|+.|++
T Consensus 66 ~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca 102 (1267)
T KOG0783|consen 66 SFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCA 102 (1267)
T ss_pred HHHHHHHhcCceeeeccccccchHhhHhhhhchHHHH
Confidence 3688999999999999778899999999999999875
No 84
>KOG4214|consensus
Probab=97.43 E-value=4.2e-05 Score=46.82 Aligned_cols=36 Identities=22% Similarity=0.328 Sum_probs=31.4
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCcccc
Q psy9955 22 LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVM 59 (60)
Q Consensus 22 l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evv 59 (60)
++.|+.....|.+||... .|+||||+||-.|.++++
T Consensus 15 ~DeVk~~v~~g~nVn~~~--ggR~plhyAAD~GQl~il 50 (117)
T KOG4214|consen 15 IDEVKQSVNEGLNVNEIY--GGRTPLHYAADYGQLSIL 50 (117)
T ss_pred HHHHHHHHHccccHHHHh--CCcccchHhhhcchHHHH
Confidence 677899999998988763 899999999999998875
No 85
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=97.19 E-value=0.00012 Score=38.03 Aligned_cols=18 Identities=39% Similarity=0.678 Sum_probs=15.4
Q ss_pred CCcHHHHHHhcCCccccC
Q psy9955 43 GASALHVAAAKGYIKVMK 60 (60)
Q Consensus 43 G~TpLH~AA~~G~~evvk 60 (60)
|.||||+||..|+.++++
T Consensus 1 g~t~lh~A~~~g~~~~~~ 18 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVK 18 (54)
T ss_dssp SSBHHHHHHHTT-HHHHH
T ss_pred CChHHHHHHHhCCHHHHH
Confidence 789999999999999874
No 86
>KOG3676|consensus
Probab=97.06 E-value=0.00064 Score=52.49 Aligned_cols=54 Identities=20% Similarity=0.270 Sum_probs=42.0
Q ss_pred hhcCCChhhccchHHHHH--------HHHHHHHHHcCCC--CCCCCCCCCCcHHHHHHhcCCccc
Q psy9955 4 FVQGINPEDARTFEERSM--------LEDAKFWLSSGCL--GDVPNPKTGASALHVAAAKGYIKV 58 (60)
Q Consensus 4 ~~qGi~iea~r~~~~~~m--------l~~~~~Ll~~Gad--vn~~~d~~G~TpLH~AA~~G~~ev 58 (60)
+.+|.|+++-+..|.+++ .+.-.++|+.|++ ..++ |++|-|||-.||.-|..+|
T Consensus 260 l~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~-N~qgLTPLtLAaklGk~em 323 (782)
T KOG3676|consen 260 LAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVR-NNQGLTPLTLAAKLGKKEM 323 (782)
T ss_pred HhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCcccccc-ccCCCChHHHHHHhhhHHH
Confidence 457888888888887776 3456777888888 7777 8888888888888887665
No 87
>KOG0522|consensus
Probab=96.91 E-value=0.00074 Score=50.49 Aligned_cols=50 Identities=22% Similarity=0.288 Sum_probs=39.4
Q ss_pred ChhhccchHHHHH--------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCcccc
Q psy9955 9 NPEDARTFEERSM--------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVM 59 (60)
Q Consensus 9 ~iea~r~~~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evv 59 (60)
.||..+.-+++++ .+.++.|+.+|||+-.+ ++.|+||||-|++.|..+++
T Consensus 47 ~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~k-N~~gWs~L~EAv~~g~~q~i 104 (560)
T KOG0522|consen 47 VIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIK-NNEGWSPLHEAVSTGNEQII 104 (560)
T ss_pred eeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCcccc-ccccccHHHHHHHcCCHHHH
Confidence 4444444444444 45899999999999999 99999999999999987654
No 88
>KOG0507|consensus
Probab=96.86 E-value=0.00056 Score=53.00 Aligned_cols=37 Identities=27% Similarity=0.310 Sum_probs=29.4
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCcccc
Q psy9955 22 LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVM 59 (60)
Q Consensus 22 l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evv 59 (60)
.+.+|+||.++..+|+. +..|.||||.||+.||.|||
T Consensus 95 ~e~vkmll~q~d~~na~-~~e~~tplhlaaqhgh~dvv 131 (854)
T KOG0507|consen 95 LEIVKMLLLQTDILNAV-NIENETPLHLAAQHGHLEVV 131 (854)
T ss_pred chHHHHHHhcccCCCcc-cccCcCccchhhhhcchHHH
Confidence 56778888888777887 88888888888888888775
No 89
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.85 E-value=0.00051 Score=28.89 Aligned_cols=19 Identities=42% Similarity=0.747 Sum_probs=16.3
Q ss_pred CCCcHHHHHHhcCCccccC
Q psy9955 42 TGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 42 ~G~TpLH~AA~~G~~evvk 60 (60)
.|.||||+|+..|+.++++
T Consensus 1 ~~~~~l~~~~~~~~~~~~~ 19 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVK 19 (30)
T ss_pred CCCCHHHHHHHcCCHHHHH
Confidence 4789999999999988864
No 90
>KOG0818|consensus
Probab=96.81 E-value=0.00087 Score=50.36 Aligned_cols=56 Identities=13% Similarity=0.103 Sum_probs=42.6
Q ss_pred hhhcCCChhhccchHHHHHHH---------HHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCcccc
Q psy9955 3 RFVQGINPEDARTFEERSMLE---------DAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVM 59 (60)
Q Consensus 3 ~~~qGi~iea~r~~~~~~ml~---------~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evv 59 (60)
++.+|.+.+--.....++=|+ -+++|+-+|||++++ |..|.||+-+|-..||-++.
T Consensus 152 ll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~-d~~GmtP~~~AR~~gH~~la 216 (669)
T KOG0818|consen 152 LLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQ-DSSGMTPVDYARQGGHHELA 216 (669)
T ss_pred HHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCC-CCCCCcHHHHHHhcCchHHH
Confidence 456677665555443332233 578999999999999 99999999999999998764
No 91
>KOG0514|consensus
Probab=96.75 E-value=0.00075 Score=49.09 Aligned_cols=58 Identities=14% Similarity=0.196 Sum_probs=44.3
Q ss_pred hhhhcCC-ChhhccchHHHHH-------------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 2 QRFVQGI-NPEDARTFEERSM-------------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 2 ~~~~qGi-~iea~r~~~~~~m-------------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
|++.-|+ ++|.-.+++-+.+ ++.|..|...| |||++-...|.|+|++|...|..++||
T Consensus 286 ~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ~gQTALMLAVSHGr~d~vk 357 (452)
T KOG0514|consen 286 ILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKASQHGQTALMLAVSHGRVDMVK 357 (452)
T ss_pred HHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-CcchhhhhhcchhhhhhhhcCcHHHHH
Confidence 4566677 7777777766554 24677777777 888887778999999999999888875
No 92
>KOG0507|consensus
Probab=96.68 E-value=0.00044 Score=53.53 Aligned_cols=51 Identities=22% Similarity=0.182 Sum_probs=41.7
Q ss_pred ChhhccchHHHHH--------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 9 NPEDARTFEERSM--------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 9 ~iea~r~~~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
.++..+..+.+.+ .+.+++|++..+-++.+ +..|.+|||+||.+|+.|+||
T Consensus 41 s~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~-d~kg~~plhlaaw~g~~e~vk 99 (854)
T KOG0507|consen 41 SHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLC-DTKGILPLHLAAWNGNLEIVK 99 (854)
T ss_pred cccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhh-hccCcceEEehhhcCcchHHH
Confidence 4444445555554 35889999999999999 899999999999999999986
No 93
>KOG3676|consensus
Probab=96.61 E-value=0.002 Score=49.85 Aligned_cols=29 Identities=21% Similarity=0.328 Sum_probs=27.0
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCcHHHHHH
Q psy9955 22 LEDAKFWLSSGCLGDVPNPKTGASALHVAA 51 (60)
Q Consensus 22 l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA 51 (60)
.+++++|++.|||+|++ |..|+|-||+-.
T Consensus 253 ~eivrlLl~~gAd~~aq-DS~GNTVLH~lV 281 (782)
T KOG3676|consen 253 PEIVRLLLAHGADPNAQ-DSNGNTVLHMLV 281 (782)
T ss_pred HHHHHHHHhcCCCCCcc-ccCCChHHHHHH
Confidence 57999999999999999 999999999865
No 94
>KOG0520|consensus
Probab=96.59 E-value=0.00067 Score=53.41 Aligned_cols=29 Identities=31% Similarity=0.438 Sum_probs=26.0
Q ss_pred HcCCCCCCCCCCCCCcHHHHHHhcCCcccc
Q psy9955 30 SSGCLGDVPNPKTGASALHVAAAKGYIKVM 59 (60)
Q Consensus 30 ~~Gadvn~~~d~~G~TpLH~AA~~G~~evv 59 (60)
-.|..++.+ |..|+||||+|+..|+..++
T Consensus 629 ~~~~ai~i~-D~~G~tpL~wAa~~G~e~l~ 657 (975)
T KOG0520|consen 629 ADGVAIDIR-DRNGWTPLHWAAFRGREKLV 657 (975)
T ss_pred ecccccccc-cCCCCcccchHhhcCHHHHH
Confidence 568889999 99999999999999998764
No 95
>KOG2384|consensus
Probab=96.58 E-value=0.0022 Score=43.19 Aligned_cols=53 Identities=17% Similarity=0.236 Sum_probs=46.4
Q ss_pred CCChhhccchHHHHHH--------HHHHHHHHcC-CCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 7 GINPEDARTFEERSML--------EDAKFWLSSG-CLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 7 Gi~iea~r~~~~~~ml--------~~~~~Ll~~G-advn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
+++|++.+.-+|+.+| +.+++|+..| +.|.+. |..|.+.+.+|=.+|+.++|+
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~-d~ssldaaqlaek~g~~~fvh 63 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVT-DESSLDAAQLAEKGGAQAFVH 63 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCccccccc-ccccchHHHHHHhcChHHHHH
Confidence 5788888888888875 5889999999 899999 999999999999999988763
No 96
>KOG2384|consensus
Probab=96.39 E-value=0.0014 Score=44.17 Aligned_cols=28 Identities=25% Similarity=0.118 Sum_probs=25.2
Q ss_pred cCCCCCCCCCCCCCcHHHHHHhcCCcccc
Q psy9955 31 SGCLGDVPNPKTGASALHVAAAKGYIKVM 59 (60)
Q Consensus 31 ~Gadvn~~~d~~G~TpLH~AA~~G~~evv 59 (60)
++.++|++ |..|+|||+.||..|..++|
T Consensus 1 se~~in~r-D~fgWTalmcaa~eg~~eav 28 (223)
T KOG2384|consen 1 SEGNINAR-DAFGWTALMCAAMEGSNEAV 28 (223)
T ss_pred CCCCccch-hhhcchHHHHHhhhcchhHH
Confidence 36799999 99999999999999988775
No 97
>KOG0506|consensus
Probab=96.37 E-value=0.0013 Score=49.15 Aligned_cols=57 Identities=23% Similarity=0.205 Sum_probs=48.2
Q ss_pred hhhcCCChhhccchHHHHH--------HHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 3 RFVQGINPEDARTFEERSM--------LEDAKFWLSS-GCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 3 ~~~qGi~iea~r~~~~~~m--------l~~~~~Ll~~-Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
++.||.|++..+.-..+.+ .+.+++|++. +.|++.+ |+-|+|||--|-..+|.+|+|
T Consensus 525 f~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~k-DRw~rtPlDdA~~F~h~~v~k 590 (622)
T KOG0506|consen 525 FALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPK-DRWGRTPLDDAKHFKHKEVVK 590 (622)
T ss_pred HHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChh-hccCCCcchHhHhcCcHHHHH
Confidence 4567888888877776666 5689999965 8899999 999999999999999999875
No 98
>KOG0521|consensus
Probab=96.36 E-value=0.002 Score=49.85 Aligned_cols=35 Identities=23% Similarity=0.328 Sum_probs=32.2
Q ss_pred HHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCcccc
Q psy9955 24 DAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVM 59 (60)
Q Consensus 24 ~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evv 59 (60)
...+||++|+++|.. |..|.||||.+...|++..+
T Consensus 671 ~~e~ll~~ga~vn~~-d~~g~~plh~~~~~g~~~~~ 705 (785)
T KOG0521|consen 671 AVELLLQNGADVNAL-DSKGRTPLHHATASGHTSIA 705 (785)
T ss_pred HHHHHHhcCCcchhh-hccCCCcchhhhhhcccchh
Confidence 678999999999999 99999999999999998764
No 99
>KOG0515|consensus
Probab=96.20 E-value=0.0039 Score=47.39 Aligned_cols=46 Identities=24% Similarity=0.203 Sum_probs=36.4
Q ss_pred hhhccchHHHHHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 10 PEDARTFEERSMLEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 10 iea~r~~~~~~ml~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
+|++=+.+ ++.|+..+..=-|+..+ +..|-|+||-|.|-||++|||
T Consensus 555 LDaaLeGE----ldlVq~~i~ev~DpSqp-NdEGITaLHNAiCaghyeIVk 600 (752)
T KOG0515|consen 555 LDAALEGE----LDLVQRIIYEVTDPSQP-NDEGITALHNAICAGHYEIVK 600 (752)
T ss_pred Hhhhhcch----HHHHHHHHHhhcCCCCC-CccchhHHhhhhhcchhHHHH
Confidence 44444445 45677777666888888 999999999999999999986
No 100
>KOG1710|consensus
Probab=96.02 E-value=0.0051 Score=43.96 Aligned_cols=36 Identities=28% Similarity=0.207 Sum_probs=31.7
Q ss_pred HHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 24 DAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 24 ~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
.+..||+.-..+|.. |.+|.|||..||++|+.+.|+
T Consensus 27 ~a~~LLs~vr~vn~~-D~sGMs~LahAaykGnl~~v~ 62 (396)
T KOG1710|consen 27 AALALLSTVRQVNQR-DPSGMSVLAHAAYKGNLTLVE 62 (396)
T ss_pred HHHHHHHHhhhhhcc-CCCcccHHHHHHhcCcHHHHH
Confidence 567788877779999 999999999999999998874
No 101
>KOG0705|consensus
Probab=95.91 E-value=0.011 Score=45.17 Aligned_cols=35 Identities=31% Similarity=0.440 Sum_probs=25.6
Q ss_pred HHHHHHHcCCCCC---CCCCCCCCcHHHHHHhcCCccc
Q psy9955 24 DAKFWLSSGCLGD---VPNPKTGASALHVAAAKGYIKV 58 (60)
Q Consensus 24 ~~~~Ll~~Gadvn---~~~d~~G~TpLH~AA~~G~~ev 58 (60)
.+-+||.+|-..+ ..-+.+|+|+||+||..|++.+
T Consensus 639 t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl 676 (749)
T KOG0705|consen 639 TAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVL 676 (749)
T ss_pred HHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhH
Confidence 5567888886642 2235667999999999998765
No 102
>PF13606 Ank_3: Ankyrin repeat
Probab=95.64 E-value=0.013 Score=27.57 Aligned_cols=16 Identities=25% Similarity=0.343 Sum_probs=14.3
Q ss_pred HHHHHHHHHcCCCCCC
Q psy9955 22 LEDAKFWLSSGCLGDV 37 (60)
Q Consensus 22 l~~~~~Ll~~Gadvn~ 37 (60)
.+.+++|+++|+|+|.
T Consensus 15 ~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 15 IEIVKYLLEHGADVNA 30 (30)
T ss_pred HHHHHHHHHcCCCCCC
Confidence 6789999999999984
No 103
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=95.36 E-value=0.024 Score=26.62 Aligned_cols=17 Identities=18% Similarity=0.102 Sum_probs=15.6
Q ss_pred HHHHHHHHHcCCCCCCC
Q psy9955 22 LEDAKFWLSSGCLGDVP 38 (60)
Q Consensus 22 l~~~~~Ll~~Gadvn~~ 38 (60)
.+.+++|++.|+++|.+
T Consensus 15 ~~~v~~Ll~~ga~~~~~ 31 (33)
T PF00023_consen 15 PDIVKLLLKHGADINAR 31 (33)
T ss_dssp HHHHHHHHHTTSCTTCB
T ss_pred HHHHHHHHHCcCCCCCC
Confidence 56899999999999988
No 104
>KOG4369|consensus
Probab=94.76 E-value=0.017 Score=47.44 Aligned_cols=36 Identities=28% Similarity=0.344 Sum_probs=27.4
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCcccc
Q psy9955 23 EDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVM 59 (60)
Q Consensus 23 ~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evv 59 (60)
|.+.+|+..|++++-+ |+.|.+||.+||--||..||
T Consensus 771 e~vellv~rganiehr-dkkgf~plImaatagh~tvV 806 (2131)
T KOG4369|consen 771 EEVELLVVRGANIEHR-DKKGFVPLIMAATAGHITVV 806 (2131)
T ss_pred HHHHHHHHhccccccc-ccccchhhhhhcccCchHHH
Confidence 4577777788888777 77888888888877777665
No 105
>KOG4369|consensus
Probab=94.51 E-value=0.0064 Score=49.78 Aligned_cols=36 Identities=19% Similarity=0.349 Sum_probs=20.5
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCcccc
Q psy9955 23 EDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVM 59 (60)
Q Consensus 23 ~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evv 59 (60)
++|.+||..|++-+.+ +....|||-.|+..||+++|
T Consensus 838 ~vvelLl~~gankehr-nvsDytPlsla~Sggy~~iI 873 (2131)
T KOG4369|consen 838 RVVELLLNAGANKEHR-NVSDYTPLSLARSGGYTKII 873 (2131)
T ss_pred hHHHHHHHhhcccccc-chhhcCchhhhcCcchHHHH
Confidence 3555555555555555 55555566555555555554
No 106
>KOG0522|consensus
Probab=93.55 E-value=0.037 Score=41.64 Aligned_cols=30 Identities=20% Similarity=0.248 Sum_probs=24.8
Q ss_pred HHcCCCCCCCCCCCCCcHHHHHHhcCCcccc
Q psy9955 29 LSSGCLGDVPNPKTGASALHVAAAKGYIKVM 59 (60)
Q Consensus 29 l~~Gadvn~~~d~~G~TpLH~AA~~G~~evv 59 (60)
.+.+..++.. |..|.||||.|+.-|+.+.+
T Consensus 42 ~~~~~~id~~-D~~g~TpLhlAV~Lg~~~~a 71 (560)
T KOG0522|consen 42 AKVSLVIDRR-DPPGRTPLHLAVRLGHVEAA 71 (560)
T ss_pred hhhhceeccc-cCCCCccHHHHHHhcCHHHH
Confidence 3456678888 99999999999999998754
No 107
>KOG0521|consensus
Probab=89.41 E-value=0.15 Score=39.76 Aligned_cols=55 Identities=13% Similarity=0.116 Sum_probs=42.4
Q ss_pred hhhcCCChhhccchHHHHH--------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccc
Q psy9955 3 RFVQGINPEDARTFEERSM--------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKV 58 (60)
Q Consensus 3 ~~~qGi~iea~r~~~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~ev 58 (60)
++..|.+++..+..+.+++ ..-+.+|+++||+.++- +.+|.+||++|....+.++
T Consensus 675 ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~-~~~~~~~l~~a~~~~~~d~ 737 (785)
T KOG0521|consen 675 LLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAF-DPDGKLPLDIAMEAANADI 737 (785)
T ss_pred HHhcCCcchhhhccCCCcchhhhhhcccchhhhhcccccccccc-CccCcchhhHHhhhccccH
Confidence 4556777887777766555 33678899999999999 9999999999965555544
No 108
>KOG2505|consensus
Probab=89.29 E-value=0.27 Score=37.26 Aligned_cols=36 Identities=25% Similarity=0.191 Sum_probs=22.0
Q ss_pred HHHHHHHcCCCCCCC-----CCCCCCcHHHHHHhcCCcccc
Q psy9955 24 DAKFWLSSGCLGDVP-----NPKTGASALHVAAAKGYIKVM 59 (60)
Q Consensus 24 ~~~~Ll~~Gadvn~~-----~d~~G~TpLH~AA~~G~~evv 59 (60)
-+..|.+++++.|.. .+-.-.||||+||.+|..++|
T Consensus 406 ~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v 446 (591)
T KOG2505|consen 406 SIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCV 446 (591)
T ss_pred HHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHH
Confidence 456666777666432 122346778888777776654
No 109
>KOG0782|consensus
Probab=89.29 E-value=0.14 Score=39.69 Aligned_cols=33 Identities=33% Similarity=0.346 Sum_probs=18.7
Q ss_pred HHHHHHHcCCC--CCCCCCCCCCcHHHHHHhcCCcc
Q psy9955 24 DAKFWLSSGCL--GDVPNPKTGASALHVAAAKGYIK 57 (60)
Q Consensus 24 ~~~~Ll~~Gad--vn~~~d~~G~TpLH~AA~~G~~e 57 (60)
.|+++|++|-. +|.. +.+|.|.||-||+.++..
T Consensus 914 ivkyildh~p~elld~~-de~get~lhkaa~~~~r~ 948 (1004)
T KOG0782|consen 914 IVKYILDHGPSELLDMA-DETGETALHKAACQRNRA 948 (1004)
T ss_pred HHHHHHhcCCHHHHHHH-hhhhhHHHHHHHHhcchH
Confidence 55666666544 2555 566666666666655543
No 110
>KOG0783|consensus
Probab=86.74 E-value=0.75 Score=37.17 Aligned_cols=49 Identities=20% Similarity=0.184 Sum_probs=40.4
Q ss_pred hhhcCCChhhccch-HHHHH--------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHh
Q psy9955 3 RFVQGINPEDARTF-EERSM--------LEDAKFWLSSGCLGDVPNPKTGASALHVAAA 52 (60)
Q Consensus 3 ~~~qGi~iea~r~~-~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~ 52 (60)
++-.|||+..-+.. +++++ ++++.+||.+|+.+... |+.|..||.+-+.
T Consensus 71 LlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~-Dkeglsplq~~~r 128 (1267)
T KOG0783|consen 71 LLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIK-DKEGLSPLQFLSR 128 (1267)
T ss_pred HHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEe-cccCCCHHHHHhh
Confidence 35568888776664 56665 67999999999999999 9999999998776
No 111
>KOG0705|consensus
Probab=86.12 E-value=0.57 Score=36.22 Aligned_cols=36 Identities=19% Similarity=0.108 Sum_probs=32.0
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCcccc
Q psy9955 23 EDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVM 59 (60)
Q Consensus 23 ~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evv 59 (60)
.-.++|+=+|+|+-++ |..|+|+|-+|-..|..|++
T Consensus 675 vl~QLLiWyg~dv~~r-da~g~t~l~yar~a~sqec~ 710 (749)
T KOG0705|consen 675 VLAQLLIWYGVDVMAR-DAHGRTALFYARQAGSQECI 710 (749)
T ss_pred hHHHHHHHhCccceec-ccCCchhhhhHhhcccHHHH
Confidence 3577888999999999 99999999999999988764
No 112
>KOG0782|consensus
Probab=78.67 E-value=1.5 Score=34.31 Aligned_cols=35 Identities=23% Similarity=0.078 Sum_probs=30.5
Q ss_pred HHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 25 AKFWLSSGCLGDVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 25 ~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
+..+..+|.++=.+ +.+..|.||+|+.-|+-||||
T Consensus 882 lqE~h~~gg~ll~~-~~~~~sllh~a~~tg~~eivk 916 (1004)
T KOG0782|consen 882 LQETHLNGGSLLIQ-GPDHCSLLHYAAKTGNGEIVK 916 (1004)
T ss_pred HHHHHhcCCceEee-CcchhhHHHHHHhcCChHHHH
Confidence 55666789999888 999999999999999999985
No 113
>KOG2505|consensus
Probab=68.90 E-value=3.4 Score=31.52 Aligned_cols=29 Identities=21% Similarity=0.418 Sum_probs=26.2
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCcHHHHHH
Q psy9955 22 LEDAKFWLSSGCLGDVPNPKTGASALHVAA 51 (60)
Q Consensus 22 l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA 51 (60)
-..+..||+.|+|+-.. |..|.||-.+++
T Consensus 443 ~k~v~~~Leeg~Dp~~k-d~~Grtpy~ls~ 471 (591)
T KOG2505|consen 443 RKCVKYFLEEGCDPSTK-DGAGRTPYSLSA 471 (591)
T ss_pred HHHHHHHHHhcCCchhc-ccCCCCcccccc
Confidence 45899999999999999 999999998876
No 114
>KOG3609|consensus
Probab=66.70 E-value=3.6 Score=32.65 Aligned_cols=25 Identities=16% Similarity=0.301 Sum_probs=20.1
Q ss_pred CCCCCCCCCcHHHHHHhcCCccccC
Q psy9955 36 DVPNPKTGASALHVAAAKGYIKVMK 60 (60)
Q Consensus 36 n~~~d~~G~TpLH~AA~~G~~evvk 60 (60)
|..+-..+-|||..||..++.||++
T Consensus 124 ~~~~ft~ditPliLAAh~NnyEil~ 148 (822)
T KOG3609|consen 124 NSPHFTPDITPLMLAAHLNNFEILQ 148 (822)
T ss_pred CcccCCCCccHHHHHHHhcchHHHH
Confidence 3344566889999999999999874
No 115
>KOG0511|consensus
Probab=63.33 E-value=8.8 Score=28.72 Aligned_cols=49 Identities=18% Similarity=0.304 Sum_probs=35.2
Q ss_pred hhhcCCChhhccchHHHHHH--------HHHHHHHHcCCCCCCCCCCCCCcHHHHHHhc
Q psy9955 3 RFVQGINPEDARTFEERSML--------EDAKFWLSSGCLGDVPNPKTGASALHVAAAK 53 (60)
Q Consensus 3 ~~~qGi~iea~r~~~~~~ml--------~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~ 53 (60)
+.+-|+++++.++...+++. .++|+||++||-.+-. ..+|. -=|++|-|
T Consensus 55 LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rd-tf~G~-RC~YgaLn 111 (516)
T KOG0511|consen 55 LVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRD-TFDGD-RCHYGALN 111 (516)
T ss_pred HHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCccccc-ccCcc-hhhhhhhh
Confidence 34578999999999888883 5899999999976543 44453 34555544
No 116
>KOG3836|consensus
Probab=60.24 E-value=1.8 Score=33.19 Aligned_cols=32 Identities=19% Similarity=0.321 Sum_probs=26.6
Q ss_pred HHHHcCCCCCCCCCCCCCcHHHHHHhcCCcccc
Q psy9955 27 FWLSSGCLGDVPNPKTGASALHVAAAKGYIKVM 59 (60)
Q Consensus 27 ~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~evv 59 (60)
.|++.|+-.+.. |..|.||+|+++-.|-.++.
T Consensus 414 ~lik~~~~~~~~-d~f~~~p~~~~~~sgdp~~~ 445 (605)
T KOG3836|consen 414 TLIKKGAHPNDD-DKFGFTPLHIPQISGDPRII 445 (605)
T ss_pred eeecccCccchh-cccccccccccCCCCCHHHh
Confidence 355678888988 99999999999998876653
No 117
>COG1732 OpuBC Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) [Cell envelope biogenesis, outer membrane]
Probab=59.05 E-value=24 Score=24.99 Aligned_cols=42 Identities=21% Similarity=0.149 Sum_probs=31.9
Q ss_pred hHHHHHHHHHHHHHHc-CCCCCCCCCCCCCcHH-HHHHhcCCccc
Q psy9955 16 FEERSMLEDAKFWLSS-GCLGDVPNPKTGASAL-HVAAAKGYIKV 58 (60)
Q Consensus 16 ~~~~~ml~~~~~Ll~~-Gadvn~~~d~~G~TpL-H~AA~~G~~ev 58 (60)
.|..++-+..+.||++ |..++.. ...|.|+. |-|-.+|..|+
T Consensus 43 tE~~IL~~m~~~lle~~~~kv~~~-~~lG~t~v~~~Al~~G~IDi 86 (300)
T COG1732 43 TEQYILGNILKQLLEKNGIKVEDK-TGLGGTAVVRNALKSGDIDI 86 (300)
T ss_pred cHHHHHHHHHHHHHHhcCCceeec-cCCCchHHHHHHHHcCCCCe
Confidence 4666667788888866 5566777 88899977 77778898775
No 118
>PF07879 PHB_acc_N: PHB/PHA accumulation regulator DNA-binding domain; InterPro: IPR012909 This domain is found at the N terminus of the polyhydroxyalkanoate (PHA) synthesis regulators. These regulators have been shown to directly bind DNA and PHA []. The invariant nature of this domain compared to the C-terminal IPR007897 from INTERPRO domain(s) suggests that it contains the DNA-binding function.
Probab=48.40 E-value=10 Score=21.19 Aligned_cols=23 Identities=35% Similarity=0.305 Sum_probs=19.2
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCC
Q psy9955 22 LEDAKFWLSSGCLGDVPNPKTGA 44 (60)
Q Consensus 22 l~~~~~Ll~~Gadvn~~~d~~G~ 44 (60)
|++++.|+..|.++-+.+.++|.
T Consensus 22 L~di~~lV~~g~~~~V~D~ktge 44 (64)
T PF07879_consen 22 LEDIAQLVREGEDFKVVDAKTGE 44 (64)
T ss_pred HHHHHHHHHCCCeEEEEECCCCc
Confidence 88999999999999887666663
No 119
>TIGR03414 ABC_choline_bnd choline ABC transporter, periplasmic binding protein. Partial phylogenetic profiling (PubMed:16930487) vs. the genome property of glycine betaine biosynthesis from choline consistently reveals a member of this ABC transporter periplasmic binding protein as the best match, save for the betaine biosynthesis enzymes themselves. Genomes often carry several paralogs, one encoded together with the permease and ATP-binding components and another encoded next to a choline-sulfatase gene, suggesting that different members of this protein family interact with shared components and give some flexibility in substrate. Of two members from Sinorhizobium meliloti 1021, one designated ChoX has been shown experimentally to bind choline (though not various related compounds such as betaine) and to be required for about 60 % of choline uptake. Members of this protein have an invariant Cys residue near the N-terminus and likely are lipoproteins.
Probab=39.81 E-value=53 Score=22.31 Aligned_cols=40 Identities=15% Similarity=0.084 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHH-cCCCCCCCCCCCCCcHHHHHHhcCCccc
Q psy9955 17 EERSMLEDAKFWLS-SGCLGDVPNPKTGASALHVAAAKGYIKV 58 (60)
Q Consensus 17 ~~~~ml~~~~~Ll~-~Gadvn~~~d~~G~TpLH~AA~~G~~ev 58 (60)
+...+-+.++.+|+ .|-+|+.. . .+..+++-|-.+|..++
T Consensus 19 ~~~~~~~i~~~iLE~~Gy~Ve~~-~-~~~~~~~~al~~GdiD~ 59 (290)
T TIGR03414 19 DITATTALASVLLEGLGYQPKVT-L-LSVPVTYAGLKDGDLDV 59 (290)
T ss_pred hHHHHHHHHHHHHHHcCCcceeE-E-ccHHHHHHHHHcCCceE
Confidence 55566778888887 68888654 2 34555677779998875
No 120
>TIGR01848 PHA_reg_PhaR polyhydroxyalkanoate synthesis repressor PhaR. Poly-B-hydroxyalkanoates are lipidlike carbon/energy storage polymers found in granular inclusions. PhaR is a regulatory protein found in general near other proteins associated with polyhydroxyalkanoate (PHA) granule biosynthesis and utilization. It is found to be a DNA-binding homotetramer that is also capable of binding short chain hydroxyalkanoic acids and PHA granules. PhaR may regulate the expression of itself, of the phasins that coat granules, and of enzymes that direct carbon flux into polymers stored in granules.
Probab=37.11 E-value=20 Score=21.86 Aligned_cols=23 Identities=30% Similarity=0.339 Sum_probs=19.4
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCC
Q psy9955 22 LEDAKFWLSSGCLGDVPNPKTGA 44 (60)
Q Consensus 22 l~~~~~Ll~~Gadvn~~~d~~G~ 44 (60)
|++++.|+..|.++-+.+.++|.
T Consensus 22 Ledi~~lV~~g~~f~V~DakTge 44 (107)
T TIGR01848 22 LEDIRDLVREGREFQVVDSKSGD 44 (107)
T ss_pred HHHHHHHHHCCCeEEEEECCCCc
Confidence 88999999999999887666663
No 121
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=31.74 E-value=53 Score=22.52 Aligned_cols=25 Identities=24% Similarity=0.279 Sum_probs=15.3
Q ss_pred cCCCCCCCCCCCCCcHHHHHHhcCCccc
Q psy9955 31 SGCLGDVPNPKTGASALHVAAAKGYIKV 58 (60)
Q Consensus 31 ~Gadvn~~~d~~G~TpLH~AA~~G~~ev 58 (60)
.+|+.=+. +. .-|+|+||+-|-.-|
T Consensus 250 ~~a~l~I~-~D--Sg~~HlAaA~~~P~I 274 (334)
T COG0859 250 AGADLVIG-ND--SGPMHLAAALGTPTI 274 (334)
T ss_pred hcCCEEEc-cC--ChHHHHHHHcCCCEE
Confidence 45555333 22 249999999886433
No 122
>PF14701 hDGE_amylase: glucanotransferase domain of human glycogen debranching enzyme
Probab=31.10 E-value=55 Score=24.21 Aligned_cols=30 Identities=27% Similarity=0.207 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHH--cCCCCCCCCCCCCCcHHHHHH
Q psy9955 18 ERSMLEDAKFWLS--SGCLGDVPNPKTGASALHVAA 51 (60)
Q Consensus 18 ~~~ml~~~~~Ll~--~Gadvn~~~d~~G~TpLH~AA 51 (60)
++.|.+=++..-+ .|.-+|-+ -.||||+|=
T Consensus 379 W~~M~~Yt~~~A~iF~G~RiDNC----HSTPlhVae 410 (423)
T PF14701_consen 379 WKHMKEYTELMAKIFHGFRIDNC----HSTPLHVAE 410 (423)
T ss_pred HHHHHHHHHHHHHhcCeeeeecC----CCCcHHHHH
Confidence 5566665555543 35555333 369999983
No 123
>PF04282 DUF438: Family of unknown function (DUF438); InterPro: IPR007380 This is a a group of uncharacterised proteins.
Probab=30.08 E-value=17 Score=20.47 Aligned_cols=53 Identities=19% Similarity=0.263 Sum_probs=35.3
Q ss_pred hhhhcCCChhhccchHHHHH--------HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHhcCCcc
Q psy9955 2 QRFVQGINPEDARTFEERSM--------LEDAKFWLSSGCLGDVPNPKTGASALHVAAAKGYIK 57 (60)
Q Consensus 2 ~~~~qGi~iea~r~~~~~~m--------l~~~~~Ll~~Gadvn~~~d~~G~TpLH~AA~~G~~e 57 (60)
.++-+|-++++.|..=...+ ...=+.|++.|.+++ +.....-+|.|..+|.++
T Consensus 7 ~~Lh~G~~~e~vk~~F~~~~~~Vs~~EI~~~Eq~Li~eG~~~e---eiq~LCdvH~~lf~~~i~ 67 (71)
T PF04282_consen 7 KRLHEGEDPEEVKEEFKKLFSDVSASEISAAEQELIQEGMPVE---EIQKLCDVHAALFKGSIE 67 (71)
T ss_pred HHHhCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCCHH---HHHHHhHHHHHHHHHHHH
Confidence 35667888888887643333 334567888886653 444556778888887765
No 124
>KOG2243|consensus
Probab=29.47 E-value=79 Score=28.45 Aligned_cols=38 Identities=24% Similarity=0.430 Sum_probs=28.9
Q ss_pred chHHHHHHHHHHHHHHcCCC-CCCCCCCCCCcHHHHHHhc
Q psy9955 15 TFEERSMLEDAKFWLSSGCL-GDVPNPKTGASALHVAAAK 53 (60)
Q Consensus 15 ~~~~~~ml~~~~~Ll~~Gad-vn~~~d~~G~TpLH~AA~~ 53 (60)
+.....|++-..+||++.-- +-.+ .--|.|||-+||+.
T Consensus 2220 rqnqkamfdhlsyllenssvglasp-amrgstpldvaaas 2258 (5019)
T KOG2243|consen 2220 RQNQKAMFDHLSYLLENSSVGLASP-AMRGSTPLDVAAAS 2258 (5019)
T ss_pred hhhHHHHHHHHHHHHhcCcccccCc-cccCCCchhhHHhh
Confidence 34667899999999987532 3445 77799999999864
No 125
>COG0107 HisF Imidazoleglycerol-phosphate synthase [Amino acid transport and metabolism]
Probab=27.23 E-value=78 Score=22.09 Aligned_cols=14 Identities=36% Similarity=0.432 Sum_probs=12.6
Q ss_pred HHHHHHHHHcCCCC
Q psy9955 22 LEDAKFWLSSGCLG 35 (60)
Q Consensus 22 l~~~~~Ll~~Gadv 35 (60)
++|++.||..|||-
T Consensus 86 ~eD~~~ll~aGADK 99 (256)
T COG0107 86 VEDARKLLRAGADK 99 (256)
T ss_pred HHHHHHHHHcCCCe
Confidence 67999999999995
No 126
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=25.28 E-value=42 Score=22.82 Aligned_cols=12 Identities=42% Similarity=0.349 Sum_probs=9.3
Q ss_pred cHHHHHHhcCCc
Q psy9955 45 SALHVAAAKGYI 56 (60)
Q Consensus 45 TpLH~AA~~G~~ 56 (60)
-|+|+|++-|-.
T Consensus 271 Gp~HlAaA~g~P 282 (348)
T PRK10916 271 GLMHVAAALNRP 282 (348)
T ss_pred hHHHHHHHhCCC
Confidence 389999988754
No 127
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=24.40 E-value=46 Score=22.14 Aligned_cols=12 Identities=33% Similarity=0.174 Sum_probs=9.3
Q ss_pred cHHHHHHhcCCc
Q psy9955 45 SALHVAAAKGYI 56 (60)
Q Consensus 45 TpLH~AA~~G~~ 56 (60)
-|+|+|++-|-.
T Consensus 264 gp~HlAaa~g~P 275 (319)
T TIGR02193 264 GLTHLAAALDKP 275 (319)
T ss_pred hHHHHHHHcCCC
Confidence 489999987744
No 128
>PF10975 DUF2802: Protein of unknown function (DUF2802); InterPro: IPR021244 This bacterial family of proteins has no known function.
Probab=22.48 E-value=31 Score=19.15 Aligned_cols=15 Identities=20% Similarity=0.242 Sum_probs=11.0
Q ss_pred ChhhhcCCChhhccc
Q psy9955 1 MQRFVQGINPEDART 15 (60)
Q Consensus 1 ~~~~~qGi~iea~r~ 15 (60)
++|+++|.++|+.-.
T Consensus 38 ~klv~~Ga~~~el~~ 52 (70)
T PF10975_consen 38 IKLVRQGASVEELME 52 (70)
T ss_pred HHHHHcCCCHHHHHH
Confidence 367888888887654
No 129
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=20.78 E-value=66 Score=21.60 Aligned_cols=12 Identities=42% Similarity=0.279 Sum_probs=9.3
Q ss_pred HHHHHHhcCCcc
Q psy9955 46 ALHVAAAKGYIK 57 (60)
Q Consensus 46 pLH~AA~~G~~e 57 (60)
|+|+|++-|-.-
T Consensus 262 p~HlAaA~~~P~ 273 (334)
T TIGR02195 262 LMHVAAALNRPL 273 (334)
T ss_pred HHHHHHHcCCCE
Confidence 899999887543
No 130
>KOG3609|consensus
Probab=20.52 E-value=15 Score=29.35 Aligned_cols=26 Identities=19% Similarity=0.179 Sum_probs=23.0
Q ss_pred CCCCCCCCCCCCcHHHHHHhcCCcccc
Q psy9955 33 CLGDVPNPKTGASALHVAAAKGYIKVM 59 (60)
Q Consensus 33 advn~~~d~~G~TpLH~AA~~G~~evv 59 (60)
-++|+. |.-|.++||+|-.|-+.|++
T Consensus 53 lninc~-d~lGr~al~iai~nenle~~ 78 (822)
T KOG3609|consen 53 LNINCR-DPLGRLALHIAIDNENLELQ 78 (822)
T ss_pred cchhcc-ChHhhhceecccccccHHHH
Confidence 357999 99999999999999988875
No 131
>PF03932 CutC: CutC family; InterPro: IPR005627 Copper transport in Escherichia coli is mediated by the products of at least six genes, cutA, cutB, cutC, cutD, cutE, and cutF. A mutation in one or more of these genes results in an increased copper sensitivity. Members of this family are between 200 and 300 amino acids in length and are found in both eukaryotes and bacteria.; GO: 0005507 copper ion binding, 0055070 copper ion homeostasis; PDB: 2BDQ_A 3IWP_I 1X8C_B 1X7I_A 1TWD_B.
Probab=20.47 E-value=1.3e+02 Score=19.95 Aligned_cols=19 Identities=26% Similarity=0.141 Sum_probs=16.1
Q ss_pred hHHHHHHHHHHHHHHcCCC
Q psy9955 16 FEERSMLEDAKFWLSSGCL 34 (60)
Q Consensus 16 ~~~~~ml~~~~~Ll~~Gad 34 (60)
.+...|.++++.+.+.|+|
T Consensus 69 ~E~~~M~~dI~~~~~~Gad 87 (201)
T PF03932_consen 69 EEIEIMKEDIRMLRELGAD 87 (201)
T ss_dssp HHHHHHHHHHHHHHHTT-S
T ss_pred HHHHHHHHHHHHHHHcCCC
Confidence 4778899999999999987
No 132
>PRK00040 rpsP 30S ribosomal protein S16; Reviewed
Probab=20.30 E-value=96 Score=17.52 Aligned_cols=15 Identities=27% Similarity=0.585 Sum_probs=12.7
Q ss_pred HHHHHHHHHcCCCCC
Q psy9955 22 LEDAKFWLSSGCLGD 36 (60)
Q Consensus 22 l~~~~~Ll~~Gadvn 36 (60)
++.+++||..||.+.
T Consensus 54 ~eri~~Wl~~GAqpt 68 (75)
T PRK00040 54 EERVLYWLGQGAQPT 68 (75)
T ss_pred HHHHHHHHHCCCccC
Confidence 678999999999863
Done!