Query psy9957
Match_columns 251
No_of_seqs 142 out of 2860
Neff 10.4
Searched_HMMs 29240
Date Fri Aug 16 23:59:03 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9957.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9957hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wdy_A 2-5A-dependent ribonucl 100.0 2.1E-41 7.3E-46 271.5 23.6 235 4-247 8-284 (285)
2 1n11_A Ankyrin; clathrin, BAND 100.0 5.4E-41 1.8E-45 285.5 24.9 219 33-251 136-379 (437)
3 1n11_A Ankyrin; clathrin, BAND 100.0 1.4E-40 4.6E-45 283.0 24.0 219 33-251 70-346 (437)
4 1wdy_A 2-5A-dependent ribonucl 100.0 3.5E-40 1.2E-44 264.4 20.7 211 41-251 3-255 (285)
5 3utm_A Tankyrase-1; tankyrase, 100.0 1.5E-39 5E-44 268.3 23.4 240 4-251 27-315 (351)
6 4g8k_A 2-5A-dependent ribonucl 100.0 1.8E-39 6.1E-44 267.3 22.8 214 33-246 48-303 (337)
7 3ljn_A Hypothetical protein; a 100.0 7.3E-41 2.5E-45 278.4 14.6 213 33-245 10-273 (364)
8 1oy3_D Transcription factor in 100.0 1.7E-39 5.9E-44 260.4 19.6 192 37-251 3-260 (282)
9 1s70_B 130 kDa myosin-binding 100.0 4.1E-39 1.4E-43 260.7 21.2 224 5-251 2-267 (299)
10 3d9h_A CDNA FLJ77766, highly s 100.0 1.2E-38 4.2E-43 256.6 22.9 220 7-251 21-257 (285)
11 3b7b_A Euchromatic histone-lys 100.0 2.2E-38 7.5E-43 248.1 23.0 194 35-251 3-212 (237)
12 2xai_A ASB-9, ankyrin repeat a 100.0 1E-38 3.6E-43 253.9 21.2 190 42-251 2-201 (261)
13 1yyh_A HN1;, notch 1, ankyrin 100.0 2.1E-39 7.3E-44 256.7 17.1 205 35-239 2-246 (253)
14 1k1a_A B-cell lymphoma 3-encod 100.0 5.8E-38 2E-42 246.1 22.5 192 37-251 3-218 (241)
15 4b93_B Ankyrin repeat domain-c 100.0 1.4E-38 4.9E-43 254.1 17.4 191 38-251 6-220 (269)
16 2fo1_E LIN-12 protein; beta-ba 100.0 1.6E-38 5.3E-43 265.3 15.9 213 36-251 87-348 (373)
17 3eu9_A Huntingtin-interacting 100.0 8.9E-38 3E-42 244.5 18.5 209 36-244 2-238 (240)
18 4g8k_A 2-5A-dependent ribonucl 100.0 1E-37 3.5E-42 256.8 19.0 214 38-251 20-275 (337)
19 2xai_A ASB-9, ankyrin repeat a 100.0 4.2E-38 1.4E-42 250.4 14.2 225 3-237 5-259 (261)
20 2dzn_A Probable 26S proteasome 100.0 6E-37 2.1E-41 238.4 20.3 186 43-251 2-210 (228)
21 2fo1_E LIN-12 protein; beta-ba 100.0 5.8E-38 2E-42 261.9 14.6 209 34-242 115-372 (373)
22 3aji_A 26S proteasome non-ATPa 100.0 4.1E-37 1.4E-41 239.9 18.0 208 4-242 9-231 (231)
23 1yyh_A HN1;, notch 1, ankyrin 100.0 2.4E-37 8E-42 244.9 16.6 184 68-251 2-225 (253)
24 3aji_A 26S proteasome non-ATPa 100.0 1.6E-36 5.6E-41 236.5 21.1 188 41-251 4-207 (231)
25 4gpm_A Engineered protein OR26 100.0 1.8E-36 6.3E-41 225.3 19.1 159 45-244 6-164 (169)
26 2f8y_A Notch homolog 1, transl 100.0 8.1E-36 2.8E-40 231.4 22.8 197 30-244 11-219 (223)
27 3kea_A K1L; tropism, ANK repea 100.0 5.1E-37 1.7E-41 247.2 14.1 206 11-247 9-226 (285)
28 2rfa_A Transient receptor pote 100.0 2.8E-36 9.5E-41 235.5 17.3 195 42-248 2-229 (232)
29 3utm_A Tankyrase-1; tankyrase, 100.0 5.8E-36 2E-40 246.8 18.8 214 38-251 19-282 (351)
30 1ikn_D Protein (I-kappa-B-alph 100.0 2.6E-37 8.9E-42 242.1 7.7 196 38-251 3-221 (236)
31 4b93_B Ankyrin repeat domain-c 100.0 4.9E-36 1.7E-40 239.4 14.6 201 4-205 14-225 (269)
32 1k1a_A B-cell lymphoma 3-encod 100.0 1.9E-35 6.4E-40 231.8 14.9 214 4-240 12-240 (241)
33 2pnn_A Transient receptor pote 100.0 7E-36 2.4E-40 238.9 12.1 205 35-250 5-268 (273)
34 3hra_A Ankyrin repeat family p 100.0 2.9E-34 1E-38 219.1 20.4 176 41-239 3-201 (201)
35 3ljn_A Hypothetical protein; a 100.0 3.5E-36 1.2E-40 250.2 9.8 230 4-244 23-317 (364)
36 1sw6_A Regulatory protein SWI6 100.0 9.5E-36 3.2E-40 244.3 12.0 221 26-251 35-318 (327)
37 3d9h_A CDNA FLJ77766, highly s 100.0 1.4E-34 4.8E-39 232.9 17.2 211 4-244 62-282 (285)
38 3b7b_A Euchromatic histone-lys 100.0 6.2E-34 2.1E-38 222.7 19.8 207 4-237 14-231 (237)
39 2etb_A Transient receptor pote 100.0 6.6E-35 2.3E-39 231.1 13.5 190 43-243 2-248 (256)
40 2f8y_A Notch homolog 1, transl 100.0 4.4E-34 1.5E-38 221.6 14.9 175 54-251 2-193 (223)
41 1oy3_D Transcription factor in 100.0 7.2E-34 2.5E-38 227.7 15.1 197 4-206 12-266 (282)
42 3jxi_A Vanilloid receptor-rela 100.0 2.6E-34 8.7E-39 228.1 10.1 192 41-243 3-252 (260)
43 2dzn_A Probable 26S proteasome 100.0 9.4E-33 3.2E-37 214.7 17.3 194 4-205 5-215 (228)
44 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.3E-32 4.3E-37 203.1 16.8 159 42-241 4-162 (162)
45 3eu9_A Huntingtin-interacting 100.0 1.4E-32 4.8E-37 214.9 17.2 183 69-251 2-212 (240)
46 3v30_A DNA-binding protein rfx 100.0 1.1E-32 3.8E-37 205.5 15.0 168 43-251 2-170 (172)
47 2rfm_A Putative ankyrin repeat 100.0 4.2E-32 1.4E-36 205.9 15.8 162 37-239 29-190 (192)
48 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.9E-31 6.6E-36 198.3 17.9 161 38-239 9-169 (169)
49 3v31_A Ankyrin repeat family A 100.0 9.7E-32 3.3E-36 199.4 16.2 160 42-242 2-161 (167)
50 3kea_A K1L; tropism, ANK repea 100.0 4.9E-33 1.7E-37 223.9 9.2 208 4-248 34-253 (285)
51 1s70_B 130 kDa myosin-binding 100.0 6.8E-32 2.3E-36 218.2 15.3 201 5-238 44-286 (299)
52 4gpm_A Engineered protein OR26 100.0 1.8E-31 6.1E-36 198.3 15.7 159 3-193 6-164 (169)
53 3f6q_A Integrin-linked protein 100.0 3.1E-31 1.1E-35 199.0 15.7 167 42-249 4-171 (179)
54 2vge_A RELA-associated inhibit 100.0 7.2E-34 2.5E-38 221.7 -1.0 175 38-235 16-207 (229)
55 1sw6_A Regulatory protein SWI6 100.0 7.8E-31 2.7E-35 215.0 16.6 167 31-205 118-323 (327)
56 1ikn_D Protein (I-kappa-B-alph 100.0 3.3E-31 1.1E-35 207.3 11.6 172 34-205 36-226 (236)
57 4hbd_A KN motif and ankyrin re 100.0 2.9E-31 9.8E-36 212.6 10.9 163 36-239 104-273 (276)
58 3hra_A Ankyrin repeat family p 100.0 2.2E-30 7.4E-35 197.6 15.3 178 3-188 7-201 (201)
59 1awc_B Protein (GA binding pro 100.0 5.6E-30 1.9E-34 187.3 16.8 151 43-235 2-152 (153)
60 3twr_A Tankyrase-2; ankyrin re 100.0 1.6E-30 5.5E-35 192.4 12.4 160 39-240 4-164 (165)
61 2rfa_A Transient receptor pote 100.0 2.3E-29 7.8E-34 196.2 16.4 149 103-251 7-199 (232)
62 1ycs_B 53BP2, P53BP2; ankyrin 100.0 1.3E-30 4.4E-35 204.5 8.1 167 41-248 3-171 (239)
63 1bd8_A P19INK4D CDK4/6 inhibit 100.0 1.3E-28 4.5E-33 180.4 16.5 153 43-238 2-155 (156)
64 1bi7_B P16INK4A, MTS1, multipl 100.0 1.4E-29 4.7E-34 185.8 10.8 139 38-251 7-146 (156)
65 1d9s_A Cyclin-dependent kinase 100.0 5.7E-29 1.9E-33 178.4 12.8 133 34-241 3-136 (136)
66 2pnn_A Transient receptor pote 100.0 2.3E-29 8E-34 201.0 11.1 168 66-251 3-235 (273)
67 3v30_A DNA-binding protein rfx 100.0 2.8E-28 9.6E-33 181.5 13.0 168 3-201 4-171 (172)
68 2etb_A Transient receptor pote 100.0 1.5E-28 5.1E-33 194.5 10.8 159 75-251 1-223 (256)
69 4hbd_A KN motif and ankyrin re 100.0 3.3E-28 1.1E-32 194.8 12.8 134 32-188 133-273 (276)
70 2rfm_A Putative ankyrin repeat 100.0 1.5E-27 5.1E-32 180.8 13.5 142 69-251 28-169 (192)
71 3t8k_A Uncharacterized protein 99.9 2E-28 6.9E-33 184.7 7.8 162 43-247 6-185 (186)
72 3f6q_A Integrin-linked protein 99.9 5.2E-27 1.8E-31 175.9 15.0 165 3-198 7-171 (179)
73 3jxi_A Vanilloid receptor-rela 99.9 1E-27 3.5E-32 190.0 11.2 161 73-251 2-227 (260)
74 3v31_A Ankyrin repeat family A 99.9 9.5E-27 3.3E-31 172.4 15.6 135 99-251 3-137 (167)
75 1ihb_A P18-INK4C(INK6), cyclin 99.9 5.2E-27 1.8E-31 172.8 13.6 155 3-190 7-162 (162)
76 2y1l_E Darpin-8.4; hydrolase-i 99.9 2.8E-26 9.6E-31 170.3 16.5 153 4-188 17-169 (169)
77 2aja_A Ankyrin repeat family p 99.9 6.5E-30 2.2E-34 212.4 -5.1 193 40-239 89-342 (376)
78 3twr_A Tankyrase-2; ankyrin re 99.9 3.7E-26 1.3E-30 168.8 13.6 154 4-189 11-164 (165)
79 2vge_A RELA-associated inhibit 99.9 4.6E-27 1.6E-31 183.1 8.4 152 59-250 1-157 (229)
80 2jab_A H10-2-G3; HER2, darpin, 99.9 6.5E-26 2.2E-30 162.4 12.8 128 38-188 9-136 (136)
81 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.7E-25 5.9E-30 157.5 14.2 126 42-190 1-126 (126)
82 1awc_B Protein (GA binding pro 99.9 1.4E-25 4.9E-30 163.7 14.1 149 3-184 4-152 (153)
83 3ui2_A Signal recognition part 99.9 1.9E-26 6.4E-31 181.4 9.7 144 39-241 41-185 (244)
84 1bd8_A P19INK4D CDK4/6 inhibit 99.9 3.1E-25 1E-29 162.4 15.0 152 3-187 4-155 (156)
85 1n0r_A 4ANK, 4 ankyrin repeats 99.9 3.5E-25 1.2E-29 155.9 14.1 125 99-241 2-126 (126)
86 3deo_A Signal recognition part 99.9 1E-25 3.5E-30 169.5 11.0 141 39-238 40-181 (183)
87 3ehr_A Osteoclast-stimulating 99.9 4.4E-26 1.5E-30 176.6 8.7 138 39-250 69-207 (222)
88 2jab_A H10-2-G3; HER2, darpin, 99.9 7.8E-25 2.7E-29 156.7 12.8 121 101-239 16-136 (136)
89 1ycs_B 53BP2, P53BP2; ankyrin 99.9 8.6E-26 2.9E-30 177.0 8.4 142 31-196 26-170 (239)
90 3t8k_A Uncharacterized protein 99.9 1.1E-25 3.9E-30 169.6 7.5 162 3-192 8-181 (186)
91 3c5r_A BARD-1, BRCA1-associate 99.9 2.2E-25 7.5E-30 159.7 7.9 130 34-187 2-131 (137)
92 3lvq_E ARF-GAP with SH3 domain 99.9 1.4E-23 4.9E-28 181.0 15.0 124 45-188 134-263 (497)
93 3aaa_C Myotrophin, protein V-1 99.9 5.2E-24 1.8E-28 149.7 9.5 111 39-172 3-113 (123)
94 3c5r_A BARD-1, BRCA1-associate 99.9 2E-23 6.8E-28 149.5 12.3 133 66-240 1-133 (137)
95 2b0o_E UPLC1; arfgap, structur 99.9 1.6E-23 5.6E-28 169.4 12.4 125 43-190 151-284 (301)
96 2aja_A Ankyrin repeat family p 99.9 3.6E-26 1.2E-30 189.9 -4.5 172 43-247 65-256 (376)
97 1n0q_A 3ANK, 3 ankyrin repeats 99.9 3.5E-23 1.2E-27 138.3 10.6 93 42-157 1-93 (93)
98 1d9s_A Cyclin-dependent kinase 99.9 6.2E-23 2.1E-27 146.8 9.8 111 66-251 2-113 (136)
99 1dcq_A PYK2-associated protein 99.9 2.8E-22 9.5E-27 160.4 14.4 127 43-243 130-265 (278)
100 3jue_A Arfgap with coiled-coil 99.9 1.4E-22 4.8E-27 167.8 12.4 164 42-243 198-366 (368)
101 3aaa_C Myotrophin, protein V-1 99.9 2.5E-22 8.4E-27 141.1 11.1 105 101-205 9-113 (123)
102 1n0q_A 3ANK, 3 ankyrin repeats 99.9 5.7E-22 2E-26 132.3 10.5 92 99-241 2-93 (93)
103 1bi7_B P16INK4A, MTS1, multipl 99.9 2.2E-22 7.7E-27 147.2 8.2 133 3-168 14-147 (156)
104 2l6b_A NR1C; ankyrin, consensu 99.9 4.8E-22 1.7E-26 137.9 7.0 105 39-166 5-109 (115)
105 3ehr_A Osteoclast-stimulating 99.9 1E-21 3.6E-26 151.9 8.0 106 96-251 70-175 (222)
106 3jue_A Arfgap with coiled-coil 99.8 5.6E-21 1.9E-25 158.2 12.1 124 99-240 199-325 (368)
107 2b0o_E UPLC1; arfgap, structur 99.8 9.1E-21 3.1E-25 153.3 11.5 126 99-242 151-285 (301)
108 2zgd_A 3 repeat synthetic anky 99.8 3.4E-20 1.2E-24 127.6 10.0 98 31-151 12-109 (110)
109 2l6b_A NR1C; ankyrin, consensu 99.8 1.2E-20 4.2E-25 130.7 7.7 97 106-202 16-112 (115)
110 3deo_A Signal recognition part 99.8 5.2E-20 1.8E-24 138.2 11.4 132 6-187 49-181 (183)
111 1dcq_A PYK2-associated protein 99.8 4.9E-20 1.7E-24 147.4 11.4 99 37-158 163-264 (278)
112 3lvq_E ARF-GAP with SH3 domain 99.8 4.9E-20 1.7E-24 158.9 12.2 125 5-161 136-269 (497)
113 3ui2_A Signal recognition part 99.8 7.6E-20 2.6E-24 143.6 11.8 118 33-190 67-185 (244)
114 2zgd_A 3 repeat synthetic anky 99.7 1.1E-16 3.7E-21 109.9 8.6 86 99-184 24-109 (110)
115 1gp8_A Protein (scaffolding pr 58.1 9.2 0.00031 19.7 2.4 17 47-63 17-33 (40)
116 3zrh_A Ubiquitin thioesterase 23.6 2.6E+02 0.0089 23.2 6.8 61 172-237 29-90 (454)
No 1
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.1e-41 Score=271.51 Aligned_cols=235 Identities=21% Similarity=0.171 Sum_probs=215.1
Q ss_pred ccchhHHHHHHHHHHHHHhhccCCCccccCCCCCcc-ccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHH
Q psy9957 4 TRSSSALFKRAEQLKRWEESETNRQPSEMGNKPKKI-KFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQ 82 (251)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~ 82 (251)
+...++..++.+.++.++.. +.+++.. +..|.||||+|+..|+.+++++|+++|++++..+..|.||||+
T Consensus 8 ~L~~A~~~g~~~~v~~Ll~~---------g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 78 (285)
T 1wdy_A 8 LLIKAVQNEDVDLVQQLLEG---------GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLL 78 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHT---------TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHc---------CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHH
Confidence 34567777888888877754 2334434 6678999999999999999999999999999999999999999
Q ss_pred HHhhCCCcccccc----------ccCCCchhhHHHhcCCHHHHHHHHHcCCCCccC----------CCCCCcHHHHHHHh
Q psy9957 83 VSKSASTLPLHSL----------NCGPGCVFLAACASSDKEEVLNLLKSGADINTA----------NVDGLTALHQLKRW 142 (251)
Q Consensus 83 a~~~~~~~~~~~~----------~~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~----------~~~g~t~l~~A~~~ 142 (251)
|+..|+.++++.+ +..|.||||+|+..++.+++++|++.|++++.+ +..|.||||+|+..
T Consensus 79 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~ 158 (285)
T 1wdy_A 79 AAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEK 158 (285)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHc
Confidence 9999999998887 567899999999999999999999999999887 78899999999999
Q ss_pred CCcchhhhhhhc-CCCCcccccCCCchHHHHHhcCC----HHHHHHHHHcCCCCcccCCCCCchhhhc------------
Q psy9957 143 EESETNRQPSEM-GNKPKKIKFSSGCVFLAACASSD----KEEVLNLLKSGADINTANVDGLTALHQA------------ 205 (251)
Q Consensus 143 ~~~~~~~~l~~~-~~~~~~~~~~~~~~l~~a~~~~~----~~~~~~Ll~~~~~~~~~~~~g~t~l~~a------------ 205 (251)
|+.+++++|++. |.++...+..+.++++.|+..+. .+++++|+++|++++.++..|.||||+|
T Consensus 159 ~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 238 (285)
T 1wdy_A 159 GHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRL 238 (285)
T ss_dssp TCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHH
Confidence 999999999987 99999999999999999999999 8999999999999999999999999987
Q ss_pred ----CCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCcccc
Q psy9957 206 ----GADLNFQDYDGWTPLHAAAHWAQREACQILVENFCDMDVKNY 247 (251)
Q Consensus 206 ----~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~d~ 247 (251)
+++++.+|..|.||||+|+..++.+++++|+++|++++.+|.
T Consensus 239 l~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d~ 284 (285)
T 1wdy_A 239 LEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL 284 (285)
T ss_dssp HHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSSC
T ss_pred HhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccc
Confidence 889999999999999999999999999999999999999985
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=5.4e-41 Score=285.50 Aligned_cols=219 Identities=21% Similarity=0.151 Sum_probs=205.0
Q ss_pred CCCCCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHHHhhCCCcccccc----------ccCCCch
Q psy9957 33 GNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSL----------NCGPGCV 102 (251)
Q Consensus 33 ~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~----------~~~~~t~ 102 (251)
+.+....+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.++++++ +..|.||
T Consensus 136 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 215 (437)
T 1n11_A 136 EASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTP 215 (437)
T ss_dssp TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCH
T ss_pred CCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCH
Confidence 344455677889999999999999999999999999999999999999999999999988877 4567899
Q ss_pred hhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHH
Q psy9957 103 FLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVL 182 (251)
Q Consensus 103 l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~ 182 (251)
||+|+..++.+++++|++.|++++.++..|.||||+|+..|+.+++++|++.+.++...+..+.++++.|+..++.++++
T Consensus 216 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~ 295 (437)
T 1n11_A 216 LHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVAD 295 (437)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999989999999999999999999999
Q ss_pred HHHHcCCCCcccCCCCCchhhhc---------------CCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCcccc
Q psy9957 183 NLLKSGADINTANVDGLTALHQA---------------GADLNFQDYDGWTPLHAAAHWAQREACQILVENFCDMDVKNY 247 (251)
Q Consensus 183 ~Ll~~~~~~~~~~~~g~t~l~~a---------------~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~d~ 247 (251)
+|+++|++++.++..|.||||+| +++++.+|..|.||||+|+..|+.+++++|+++|++++.+|.
T Consensus 296 ~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~ 375 (437)
T 1n11_A 296 VLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSS 375 (437)
T ss_dssp HHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCS
T ss_pred HHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCC
Confidence 99999999999999999999988 899999999999999999999999999999999999999999
Q ss_pred cCCC
Q psy9957 248 VVST 251 (251)
Q Consensus 248 ~g~t 251 (251)
.|+|
T Consensus 376 ~g~t 379 (437)
T 1n11_A 376 DGTT 379 (437)
T ss_dssp SSCC
T ss_pred CCCC
Confidence 9987
No 3
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.4e-40 Score=283.03 Aligned_cols=219 Identities=22% Similarity=0.249 Sum_probs=155.9
Q ss_pred CCCCCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHHHhhCCCcccccc----------ccCCCch
Q psy9957 33 GNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSL----------NCGPGCV 102 (251)
Q Consensus 33 ~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~----------~~~~~t~ 102 (251)
+.+++..+..|.||||+|+..|+.++|++|+++|++++..+..|.||||+|++.|+.++++.+ +..|.||
T Consensus 70 g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~ 149 (437)
T 1n11_A 70 KAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTP 149 (437)
T ss_dssp TCCSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCH
T ss_pred CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCH
Confidence 455566667777777777777777777777777777777777777777777777777766555 4556677
Q ss_pred hhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHH
Q psy9957 103 FLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVL 182 (251)
Q Consensus 103 l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~ 182 (251)
||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|++.|.++......+.++++.|+..++.++++
T Consensus 150 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~ 229 (437)
T 1n11_A 150 LHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVAR 229 (437)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHH
Confidence 77777777777777777777777777777777777777777777777777777666665556666666666666666666
Q ss_pred HHHHcCCCCcccCCCCCchhhhc------------------------------------------------CCCCCCCCC
Q psy9957 183 NLLKSGADINTANVDGLTALHQA------------------------------------------------GADLNFQDY 214 (251)
Q Consensus 183 ~Ll~~~~~~~~~~~~g~t~l~~a------------------------------------------------~~~~~~~~~ 214 (251)
.|+++|++++..+..|.||||+| +++++.++.
T Consensus 230 ~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 309 (437)
T 1n11_A 230 SLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTR 309 (437)
T ss_dssp HHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCS
T ss_pred HHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCC
Confidence 66666666665555555555544 566666777
Q ss_pred CCCcHHHHHHHhCcHHHHHHHHhCCCCCCcccccCCC
Q psy9957 215 DGWTPLHAAAHWAQREACQILVENFCDMDVKNYVVST 251 (251)
Q Consensus 215 ~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~d~~g~t 251 (251)
.|.||||+|+..|+.+++++|+++|+|+|.+|..|+|
T Consensus 310 ~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t 346 (437)
T 1n11_A 310 MGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYS 346 (437)
T ss_dssp SCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCC
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCC
Confidence 7777777777777777777777777777777777765
No 4
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=3.5e-40 Score=264.44 Aligned_cols=211 Identities=24% Similarity=0.287 Sum_probs=199.8
Q ss_pred cCCChHHHHHHhcCCHHHHHHHHHcCCCCccc-CCCCccHHHHHHhhCCCcccccc----------ccCCCchhhHHHhc
Q psy9957 41 FSSGCVFLAACASSDKEEVLNLLKSGADINTA-NVDGLTALHQVSKSASTLPLHSL----------NCGPGCVFLAACAS 109 (251)
Q Consensus 41 ~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g~tpLh~a~~~~~~~~~~~~----------~~~~~t~l~~a~~~ 109 (251)
.+|.|+|+.|+..|+.++|++|+++|++++.. +..|+||||+|++.|+.++++++ +..|.||||+|+..
T Consensus 3 ~~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (285)
T 1wdy_A 3 VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIA 82 (285)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc
Confidence 46789999999999999999999999999988 77899999999999999999887 57788999999999
Q ss_pred CCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCccc----------ccCCCchHHHHHhcCCHH
Q psy9957 110 SDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKI----------KFSSGCVFLAACASSDKE 179 (251)
Q Consensus 110 ~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~----------~~~~~~~l~~a~~~~~~~ 179 (251)
|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|++.|.++... ...+.++++.|+..++.+
T Consensus 83 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 162 (285)
T 1wdy_A 83 GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVE 162 (285)
T ss_dssp TCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHH
T ss_pred CCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHH
Confidence 9999999999999999999999999999999999999999999999988766 567889999999999999
Q ss_pred HHHHHHHc-CCCCcccCCCCCchhhhc-------------------CCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHh-C
Q psy9957 180 EVLNLLKS-GADINTANVDGLTALHQA-------------------GADLNFQDYDGWTPLHAAAHWAQREACQILVE-N 238 (251)
Q Consensus 180 ~~~~Ll~~-~~~~~~~~~~g~t~l~~a-------------------~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~-~ 238 (251)
++++|+++ |++++..+..|.||||+| +++++.+|..|.||||+|+..++.+++++|++ .
T Consensus 163 ~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 242 (285)
T 1wdy_A 163 VLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQE 242 (285)
T ss_dssp HHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSS
T ss_pred HHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcc
Confidence 99999987 999999999999999977 78999999999999999999999999999999 8
Q ss_pred CCCCCcccccCCC
Q psy9957 239 FCDMDVKNYVVST 251 (251)
Q Consensus 239 ga~~~~~d~~g~t 251 (251)
|++++.+|..|+|
T Consensus 243 g~~~~~~~~~g~t 255 (285)
T 1wdy_A 243 HIEINDTDSDGKT 255 (285)
T ss_dssp SCCTTCCCTTSCC
T ss_pred CCCccccCCCCCc
Confidence 9999999999987
No 5
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.5e-39 Score=268.32 Aligned_cols=240 Identities=24% Similarity=0.186 Sum_probs=205.8
Q ss_pred ccchhHHHHHHHHHHHHHhhccCCCccccCCCCCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHH
Q psy9957 4 TRSSSALFKRAEQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQV 83 (251)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a 83 (251)
+...++..++.+.++.++.. .+.+++..+..|.||||+|+..|+.++|++|+++|++++..+..|+||||+|
T Consensus 27 ~L~~A~~~g~~~~v~~ll~~--------~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 98 (351)
T 3utm_A 27 ELLEAARSGNEEKLMALLTP--------LNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNA 98 (351)
T ss_dssp HHHHHHHHTCHHHHHHHCCT--------TTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred hHHHHHHcCCHHHHHHHHHh--------cCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHH
Confidence 45667778888888877643 3456677788899999999999999999999999999999999999999999
Q ss_pred HhhCCCcccccc----------ccCCCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHH--------------
Q psy9957 84 SKSASTLPLHSL----------NCGPGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQL-------------- 139 (251)
Q Consensus 84 ~~~~~~~~~~~~----------~~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A-------------- 139 (251)
+..|+.++++.+ +..|.||||+|+..++.+++++|++.|++++.++..|.+|+++|
T Consensus 99 ~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~ 178 (351)
T 3utm_A 99 CSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFK 178 (351)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhc
Confidence 999998888776 55678899999999999999999999999988888888887765
Q ss_pred -------HHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhc---CCHHHHHHHHHcCCCCcccCCCCCchhhhc----
Q psy9957 140 -------KRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACAS---SDKEEVLNLLKSGADINTANVDGLTALHQA---- 205 (251)
Q Consensus 140 -------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a---- 205 (251)
+..+..+.++.++............+.++++.|+.. +..+++++|+++|++++.++..|.||||+|
T Consensus 179 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g 258 (351)
T 3utm_A 179 GHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERA 258 (351)
T ss_dssp HHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred ccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcC
Confidence 344555555556655555555667788999999998 557899999999999999999999999988
Q ss_pred -----------CCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCcccccCCC
Q psy9957 206 -----------GADLNFQDYDGWTPLHAAAHWAQREACQILVENFCDMDVKNYVVST 251 (251)
Q Consensus 206 -----------~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~d~~g~t 251 (251)
+++++.+|..|+||||+|+..++.+++++|+++|+|++.+|..|+|
T Consensus 259 ~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t 315 (351)
T 3utm_A 259 HNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFT 315 (351)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred CHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCC
Confidence 8999999999999999999999999999999999999999999987
No 6
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.8e-39 Score=267.30 Aligned_cols=214 Identities=23% Similarity=0.194 Sum_probs=154.0
Q ss_pred CCCCCcccc-CCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHHHhhCCCcccccc----------ccCCCc
Q psy9957 33 GNKPKKIKF-SSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSL----------NCGPGC 101 (251)
Q Consensus 33 ~~~~~~~~~-~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~----------~~~~~t 101 (251)
|.+++..+. .|.||||+||..|+.++|++|+++|++++..+..+.+|++.++..+.......+ +..|.|
T Consensus 48 Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t 127 (337)
T 4g8k_A 48 GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFT 127 (337)
T ss_dssp TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCB
T ss_pred CCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCC
Confidence 344444433 255666666666666666666666665555555555555554444443332222 567788
Q ss_pred hhhHHHhcCCHHHHHHHHHcCCCCccC----------CCCCCcHHHHHHHhCCcchhhhhhh-cCCCCcccccCCCchHH
Q psy9957 102 VFLAACASSDKEEVLNLLKSGADINTA----------NVDGLTALHQLKRWEESETNRQPSE-MGNKPKKIKFSSGCVFL 170 (251)
Q Consensus 102 ~l~~a~~~~~~~~v~~Ll~~g~~~~~~----------~~~g~t~l~~A~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~l~ 170 (251)
|||+|+..|+.+++++|++.|++++.+ +..|.||||+|+..|+.+++++|+. .|++++..+..+.++++
T Consensus 128 ~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~ 207 (337)
T 4g8k_A 128 AFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALI 207 (337)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHH
T ss_pred HHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHH
Confidence 888888888888888888888877643 3457888888888888888888885 57888888888888887
Q ss_pred HHHhcCC---H-HHHHHHHHcCCCCcccCCCCCchhhhc----------------CCCCCCCCCCCCcHHHHHHHhCcHH
Q psy9957 171 AACASSD---K-EEVLNLLKSGADINTANVDGLTALHQA----------------GADLNFQDYDGWTPLHAAAHWAQRE 230 (251)
Q Consensus 171 ~a~~~~~---~-~~~~~Ll~~~~~~~~~~~~g~t~l~~a----------------~~~~~~~~~~g~t~l~~A~~~~~~~ 230 (251)
+++..+. . .++++|+++|++++.+|..|.||||+| +++++.+|..|+||||+|++.|+.+
T Consensus 208 ~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~ 287 (337)
T 4g8k_A 208 HALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKK 287 (337)
T ss_dssp HHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHH
T ss_pred HHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHH
Confidence 7655443 2 466778888888888888888888876 6788888888888888888888888
Q ss_pred HHHHHHhCCCCCCccc
Q psy9957 231 ACQILVENFCDMDVKN 246 (251)
Q Consensus 231 i~~~Ll~~ga~~~~~d 246 (251)
+|++|+++|||+|.+|
T Consensus 288 iv~~Ll~~GAd~n~~~ 303 (337)
T 4g8k_A 288 IAELLCKRGASTDCGD 303 (337)
T ss_dssp HHHHHHTTSCSSTTCC
T ss_pred HHHHHHHCCCCCCCCC
Confidence 8888888888888765
No 7
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=7.3e-41 Score=278.36 Aligned_cols=213 Identities=20% Similarity=0.162 Sum_probs=197.5
Q ss_pred CCCCCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHHHhhCCCcccccc--------ccCCCchhh
Q psy9957 33 GNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSL--------NCGPGCVFL 104 (251)
Q Consensus 33 ~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~--------~~~~~t~l~ 104 (251)
..+.+..+..|.||||+||..|+.++|++|+++|++++..|..|+||||+|+..|+.++++++ ...|.||||
T Consensus 10 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~ 89 (364)
T 3ljn_A 10 KLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIH 89 (364)
T ss_dssp ------CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHH
T ss_pred CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHH
Confidence 455667888999999999999999999999999999999999999999999999999999988 347899999
Q ss_pred HHHhcCCHHHHHHHHHc----CCCCcc-----------------CCCCCCcHHHHHHHhC--CcchhhhhhhcCCCCccc
Q psy9957 105 AACASSDKEEVLNLLKS----GADINT-----------------ANVDGLTALHQLKRWE--ESETNRQPSEMGNKPKKI 161 (251)
Q Consensus 105 ~a~~~~~~~~v~~Ll~~----g~~~~~-----------------~~~~g~t~l~~A~~~~--~~~~~~~l~~~~~~~~~~ 161 (251)
+|+..|+.+++++|++. |.+++. ++..|.||||+|+..| +.+++++|++.|++++..
T Consensus 90 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~ 169 (364)
T 3ljn_A 90 LAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAK 169 (364)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCC
T ss_pred HHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCccc
Confidence 99999999999999999 888877 8889999999999999 999999999999999999
Q ss_pred ccCCCchHHHHHhcCCHHHHHHHHHcCCC-----CcccCCCCCchhhhc---------------CCCCCCCCCCCCcHHH
Q psy9957 162 KFSSGCVFLAACASSDKEEVLNLLKSGAD-----INTANVDGLTALHQA---------------GADLNFQDYDGWTPLH 221 (251)
Q Consensus 162 ~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~-----~~~~~~~g~t~l~~a---------------~~~~~~~~~~g~t~l~ 221 (251)
+..+.+++++|+..++.+++++|+++|++ ++..|..|.||||+| |++++.+|..|.||||
T Consensus 170 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~ 249 (364)
T 3ljn_A 170 DKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLY 249 (364)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 99999999999999999999999999999 999999999999988 8999999999999999
Q ss_pred HHHHhCcHHHHHHHHhCCCCCCcc
Q psy9957 222 AAAHWAQREACQILVENFCDMDVK 245 (251)
Q Consensus 222 ~A~~~~~~~i~~~Ll~~ga~~~~~ 245 (251)
+|+..|+.+++++|+++|++++.+
T Consensus 250 ~A~~~g~~~~v~~Ll~~~~~~~~~ 273 (364)
T 3ljn_A 250 LSVRAAMVLLTKELLQKTDVFLIQ 273 (364)
T ss_dssp HHHHTCCHHHHHHHHHHSCHHHHH
T ss_pred HHHHhChHHHHHHHHHcCCchhhh
Confidence 999999999999999999876543
No 8
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.7e-39 Score=260.43 Aligned_cols=192 Identities=24% Similarity=0.182 Sum_probs=158.3
Q ss_pred CccccCCChHHHHHHhcCCHHHHHHHHHcCCC---CcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHH
Q psy9957 37 KKIKFSSGCVFLAACASSDKEEVLNLLKSGAD---INTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKE 113 (251)
Q Consensus 37 ~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~ 113 (251)
+.++..|.||||+||..|+.++|++|+++|++ ++..+..|+||||+ |+..|+.+
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~-----------------------A~~~g~~~ 59 (282)
T 1oy3_D 3 GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHL-----------------------AAILGEAS 59 (282)
T ss_dssp CCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHH-----------------------HHHHTCHH
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHH-----------------------HHHcCCHH
Confidence 45678999999999999999999999999988 78889999999999 77777778
Q ss_pred HHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCC------------------------------------
Q psy9957 114 EVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNK------------------------------------ 157 (251)
Q Consensus 114 ~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~------------------------------------ 157 (251)
++++|++.|++++.++..|.||||+|+..++.+++++|++.+.+
T Consensus 60 ~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (282)
T 1oy3_D 60 TVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENE 139 (282)
T ss_dssp HHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-------------------------------
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchh
Confidence 88888888888877777788888888888888888887776644
Q ss_pred -----------CcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCCC-CCchhhhc---------------CCCCC
Q psy9957 158 -----------PKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVD-GLTALHQA---------------GADLN 210 (251)
Q Consensus 158 -----------~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~-g~t~l~~a---------------~~~~~ 210 (251)
+...+..+.+++|.|+..++.+++++|+++|++++..+.. |.||||+| |++++
T Consensus 140 ~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~ 219 (282)
T 1oy3_D 140 EEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPT 219 (282)
T ss_dssp ----CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred hhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 3344556777888888888888888888888888877744 88888877 78888
Q ss_pred CCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCcccccCCC
Q psy9957 211 FQDYDGWTPLHAAAHWAQREACQILVENFCDMDVKNYVVST 251 (251)
Q Consensus 211 ~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~d~~g~t 251 (251)
.+|..|.||||+|+..++.+++++|+++|++++.+|..|.|
T Consensus 220 ~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t 260 (282)
T 1oy3_D 220 ARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLS 260 (282)
T ss_dssp CCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC-----
T ss_pred ccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccc
Confidence 99999999999999999999999999999999999999987
No 9
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=4.1e-39 Score=260.66 Aligned_cols=224 Identities=46% Similarity=0.672 Sum_probs=171.5
Q ss_pred cchhHHHHHHHHHHHHHhhccCCCccccCCCCCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHHH
Q psy9957 5 RSSSALFKRAEQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVS 84 (251)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~ 84 (251)
+..++..++.+.+++|+.+................+.++.|||+.||..|+.++|+.|+++|++++..+..|+||||+
T Consensus 2 ~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~-- 79 (299)
T 1s70_B 2 KMADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQ-- 79 (299)
T ss_dssp CSHHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHH--
T ss_pred chhHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHH--
Confidence 346788999999999998876555544445555677889999999999999999999999999999999999999999
Q ss_pred hhCCCccccccccCCCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccC
Q psy9957 85 KSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFS 164 (251)
Q Consensus 85 ~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~ 164 (251)
|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|++.|+++...+..
T Consensus 80 ---------------------A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~ 138 (299)
T 1s70_B 80 ---------------------ACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSE 138 (299)
T ss_dssp ---------------------HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT
T ss_pred ---------------------HHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCC
Confidence 66666666666666666666666666666666666666666666666666666666666
Q ss_pred CCchHHHHHhcCCHHHHHHHHH-cCCCCc--------------------------ccCCCCCchhhhc------------
Q psy9957 165 SGCVFLAACASSDKEEVLNLLK-SGADIN--------------------------TANVDGLTALHQA------------ 205 (251)
Q Consensus 165 ~~~~l~~a~~~~~~~~~~~Ll~-~~~~~~--------------------------~~~~~g~t~l~~a------------ 205 (251)
+.++++.|+..+..+++..++. .+.+++ ..+..|.||||+|
T Consensus 139 g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 218 (299)
T 1s70_B 139 GDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLL 218 (299)
T ss_dssp SCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHH
T ss_pred CCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHH
Confidence 6666666666665555555442 233332 2345667777766
Q ss_pred ---CCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCcccccCCC
Q psy9957 206 ---GADLNFQDYDGWTPLHAAAHWAQREACQILVENFCDMDVKNYVVST 251 (251)
Q Consensus 206 ---~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~d~~g~t 251 (251)
+++++.+|..|.||||+|+..|+.+++++|+++|+|++.+|..|+|
T Consensus 219 l~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t 267 (299)
T 1s70_B 219 IQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQT 267 (299)
T ss_dssp HTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred HHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCC
Confidence 6778888889999999999999999999999999999999999987
No 10
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=256.62 Aligned_cols=220 Identities=21% Similarity=0.166 Sum_probs=133.5
Q ss_pred hhHHHHHHHHHHHHHhhccCCCcc--ccCCCCCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHHH
Q psy9957 7 SSALFKRAEQLKRWEESETNRQPS--EMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVS 84 (251)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~ 84 (251)
.++..++...+.+.....+...+. ......+..+..|.||||+|+..|+.++|++|+++|++++..+..|+||||+
T Consensus 21 ~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~-- 98 (285)
T 3d9h_A 21 MASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHE-- 98 (285)
T ss_dssp ---------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHH--
T ss_pred HHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHH--
Confidence 456666666666654333221111 0122345678899999999999999999999999999999999999999999
Q ss_pred hhCCCccccccccCCCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccC
Q psy9957 85 KSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFS 164 (251)
Q Consensus 85 ~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~ 164 (251)
|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|++.|.++... ..
T Consensus 99 ---------------------A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~ 156 (285)
T 3d9h_A 99 ---------------------ACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPE-SD 156 (285)
T ss_dssp ---------------------HHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCS-CT
T ss_pred ---------------------HHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCC-CC
Confidence 55555555555555555555555555555555555555555555555555544322 22
Q ss_pred CCchHHHHHhcCCHHHHHHHHHcCCCCcccCCCCCchhhhc---------------CCCCCCCCCCCCcHHHHHHHhCcH
Q psy9957 165 SGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQA---------------GADLNFQDYDGWTPLHAAAHWAQR 229 (251)
Q Consensus 165 ~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a---------------~~~~~~~~~~g~t~l~~A~~~~~~ 229 (251)
+.++++.|+..++.+++++|+++|++++.+|..|.||||+| +++++. +..|.||||+|+..++.
T Consensus 157 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~ 235 (285)
T 3d9h_A 157 LASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASE 235 (285)
T ss_dssp TSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCH
Confidence 45555555555555555555555555555555555555554 455553 56677777778777788
Q ss_pred HHHHHHHhCCCCCCcccccCCC
Q psy9957 230 EACQILVENFCDMDVKNYVVST 251 (251)
Q Consensus 230 ~i~~~Ll~~ga~~~~~d~~g~t 251 (251)
+++++|+++|+|++.+|..|+|
T Consensus 236 ~~v~~Ll~~gad~~~~d~~g~t 257 (285)
T 3d9h_A 236 ELACLLMDFGADTQAKNAEGKR 257 (285)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCC
T ss_pred HHHHHHHHCCCCCCCcCCCCCC
Confidence 8888888888888777777776
No 11
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=2.2e-38 Score=248.10 Aligned_cols=194 Identities=24% Similarity=0.233 Sum_probs=147.6
Q ss_pred CCCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHHH
Q psy9957 35 KPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEE 114 (251)
Q Consensus 35 ~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 114 (251)
+.+..+..|.||||+|+..|+.+++++|+++|++++..+..|+||||+ |+..|+.++
T Consensus 3 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~-----------------------A~~~~~~~~ 59 (237)
T 3b7b_A 3 NFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLME-----------------------AAENNHLEA 59 (237)
T ss_dssp CCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHH-----------------------HHHTTCHHH
T ss_pred CcccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHH-----------------------HHHhCCHHH
Confidence 345677889999999999999999999999999999999999999999 555666666
Q ss_pred HHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcC-CCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcc
Q psy9957 115 VLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMG-NKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINT 193 (251)
Q Consensus 115 v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~ 193 (251)
+++|++.|++++.++..|.||||+|+..|+.+++++|++.+ .++...+..+.++++.|+..++.+++++|+++|++++.
T Consensus 60 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 139 (237)
T 3b7b_A 60 VKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINI 139 (237)
T ss_dssp HHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCc
Confidence 66666666666666666666666666666666666666655 45555555566666666666666666666666666666
Q ss_pred cCCCCCchhhhc---------------CCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCcccccCCC
Q psy9957 194 ANVDGLTALHQA---------------GADLNFQDYDGWTPLHAAAHWAQREACQILVENFCDMDVKNYVVST 251 (251)
Q Consensus 194 ~~~~g~t~l~~a---------------~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~d~~g~t 251 (251)
++..|.||||+| +++++.+|..|.||||+|+..++.+++++|+++|+|++.+|..|+|
T Consensus 140 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t 212 (237)
T 3b7b_A 140 RDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGET 212 (237)
T ss_dssp CCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCC
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCC
Confidence 666666666655 6677777888899999999999999999999999999999999887
No 12
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=253.86 Aligned_cols=190 Identities=24% Similarity=0.253 Sum_probs=115.2
Q ss_pred CCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHHHhhCCCcccccc----------ccCCCchhhHHHhcCC
Q psy9957 42 SSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSL----------NCGPGCVFLAACASSD 111 (251)
Q Consensus 42 ~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~----------~~~~~t~l~~a~~~~~ 111 (251)
+|.||||+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.++++.+ +..|.||||+|+..|+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGS 81 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 689999999999999999999999999999999999999995555554444443 3344444555544445
Q ss_pred HHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCC
Q psy9957 112 KEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADI 191 (251)
Q Consensus 112 ~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~ 191 (251)
.+++++|++.|++++. +..|.||||+|+..|+.+++++|++.|.+++..+..+.+++|.|+..++.+++++|+++|+
T Consensus 82 ~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-- 158 (261)
T 2xai_A 82 WDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGA-- 158 (261)
T ss_dssp HHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTC--
T ss_pred HHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCC--
Confidence 5555555544444442 2234445555554444445555544444444444444444444444444444444444444
Q ss_pred cccCCCCCchhhhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCcccccCCC
Q psy9957 192 NTANVDGLTALHQAGADLNFQDYDGWTPLHAAAHWAQREACQILVENFCDMDVKNYVVST 251 (251)
Q Consensus 192 ~~~~~~g~t~l~~a~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~d~~g~t 251 (251)
+++. +..|.||||+|+..++.+++++|+++|+|++.+|..|+|
T Consensus 159 ----------------~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t 201 (261)
T 2xai_A 159 ----------------DVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKR 201 (261)
T ss_dssp ----------------CTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred ----------------CCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC
Confidence 4442 455666666666666666666666666666666666654
No 13
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=2.1e-39 Score=256.65 Aligned_cols=205 Identities=18% Similarity=0.141 Sum_probs=149.9
Q ss_pred CCCccccCCChHHHHHHhcC-------------CHHHHHHHHHcCCCCcc-cCCCCccHHHHHHhhCCCcccccc-----
Q psy9957 35 KPKKIKFSSGCVFLAACASS-------------DKEEVLNLLKSGADINT-ANVDGLTALHQVSKSASTLPLHSL----- 95 (251)
Q Consensus 35 ~~~~~~~~~~t~L~~A~~~~-------------~~~~v~~Ll~~g~~~~~-~~~~g~tpLh~a~~~~~~~~~~~~----- 95 (251)
+++.++..|.||||+|+..| +.++++.|+++|++++. .|..|+||||+|++.|+.++++.+
T Consensus 2 dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 81 (253)
T 1yyh_A 2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA 81 (253)
T ss_dssp --------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 45667889999999999977 89999999999999865 488999999999999998888876
Q ss_pred -----ccCCCchhhHHHhcCCHHHHHHHHHcCC-CCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchH
Q psy9957 96 -----NCGPGCVFLAACASSDKEEVLNLLKSGA-DINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVF 169 (251)
Q Consensus 96 -----~~~~~t~l~~a~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l 169 (251)
+..|.||||+|+..++.+++++|++.+. +++.++..|.||||+|+..++.+++++|++.|.++...+..+.+++
T Consensus 82 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L 161 (253)
T 1yyh_A 82 DANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSAL 161 (253)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHH
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 5677899999999999999999999987 8889999999999999999999999999999999988888899999
Q ss_pred HHHHhcCCHHHHHHHHHcCCCCcccCCCCCchhhhc---------------CCCCCCCCCCCCcHHHHHHHhCcHHHHHH
Q psy9957 170 LAACASSDKEEVLNLLKSGADINTANVDGLTALHQA---------------GADLNFQDYDGWTPLHAAAHWAQREACQI 234 (251)
Q Consensus 170 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a---------------~~~~~~~~~~g~t~l~~A~~~~~~~i~~~ 234 (251)
|.|+..++.+++++|+++|++++.+|..|.||||+| |++++.+|..|.||||+|+..|+.+|+++
T Consensus 162 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~ 241 (253)
T 1yyh_A 162 HWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRL 241 (253)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHH
Confidence 999999999999999999999998888888888877 88888888888999999999999999888
Q ss_pred HHhCC
Q psy9957 235 LVENF 239 (251)
Q Consensus 235 Ll~~g 239 (251)
|.+..
T Consensus 242 l~~~~ 246 (253)
T 1yyh_A 242 LDLEH 246 (253)
T ss_dssp HHC--
T ss_pred HHHHh
Confidence 88754
No 14
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=5.8e-38 Score=246.10 Aligned_cols=192 Identities=23% Similarity=0.239 Sum_probs=137.0
Q ss_pred CccccCCChHHHHHHhcCCHHHHHHHHH----cCCCCcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCH
Q psy9957 37 KKIKFSSGCVFLAACASSDKEEVLNLLK----SGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDK 112 (251)
Q Consensus 37 ~~~~~~~~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~ 112 (251)
+..+.+|.||||+||..|+.+++++|++ .|++++..+..|+||||+ |+..|+.
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~-----------------------A~~~~~~ 59 (241)
T 1k1a_A 3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHL-----------------------AVITTLP 59 (241)
T ss_dssp ----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHH-----------------------HHHTTCH
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHH-----------------------HHHcCCH
Confidence 3567899999999999999999999997 799999999999999999 5555555
Q ss_pred HHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCC----CCcccccCCCchHHHHHhcCCHHHHHHHHHcC
Q psy9957 113 EEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGN----KPKKIKFSSGCVFLAACASSDKEEVLNLLKSG 188 (251)
Q Consensus 113 ~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~ 188 (251)
+++++|++.|++++.++..|.||||+|+..++.+++++|++.+. ++...+..+.++++.|+..++.+++++|+++|
T Consensus 60 ~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 139 (241)
T 1k1a_A 60 SVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERG 139 (241)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcC
Confidence 55555555555555555555555555555555555555555554 44444455555555555555555555555555
Q ss_pred CCCcccC-CCCCchhhhc---------------CCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCcccccCCC
Q psy9957 189 ADINTAN-VDGLTALHQA---------------GADLNFQDYDGWTPLHAAAHWAQREACQILVENFCDMDVKNYVVST 251 (251)
Q Consensus 189 ~~~~~~~-~~g~t~l~~a---------------~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~d~~g~t 251 (251)
++++..+ ..|.||||+| +++++.+|..|.||||+|+..++.+++++|+++|+|++.+|..|+|
T Consensus 140 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t 218 (241)
T 1k1a_A 140 ADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDT 218 (241)
T ss_dssp CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred CCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCC
Confidence 5555555 4555555554 5666777778889999999999999999999999999999988876
No 15
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=254.07 Aligned_cols=191 Identities=23% Similarity=0.214 Sum_probs=124.7
Q ss_pred ccccCCChHHHHHHhcCCHHHHHHHHHcCCC--------CcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhc
Q psy9957 38 KIKFSSGCVFLAACASSDKEEVLNLLKSGAD--------INTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACAS 109 (251)
Q Consensus 38 ~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~--------~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~ 109 (251)
..++.+.++|+.||..|+.++|++||++|++ ++..+..|.||||+ |+..
T Consensus 6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~-----------------------a~~~ 62 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQ-----------------------CPKC 62 (269)
T ss_dssp -CCCHHHHHHHHHHHTTCHHHHHHHHTCC---------------------------------------------------
T ss_pred ccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHH-----------------------HHHh
Confidence 4567788999999999999999999999876 34556778888888 4444
Q ss_pred CCH-HHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcC
Q psy9957 110 SDK-EEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSG 188 (251)
Q Consensus 110 ~~~-~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~ 188 (251)
+.. .+++.|++.|++++.+|..|+||||+|+..|+.+++++|++.++++......+.++++.++..++.++++.|+++|
T Consensus 63 ~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g 142 (269)
T 4b93_B 63 APAQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSN 142 (269)
T ss_dssp ------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCC
Confidence 433 4566666777777777777777777777777777777777777666666666667777777777777777777777
Q ss_pred CCCcccCCCCCchhhhc---------------CCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCcccccCCC
Q psy9957 189 ADINTANVDGLTALHQA---------------GADLNFQDYDGWTPLHAAAHWAQREACQILVENFCDMDVKNYVVST 251 (251)
Q Consensus 189 ~~~~~~~~~g~t~l~~a---------------~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~d~~g~t 251 (251)
++++.+|..|.||||+| |+++|.++..|.||||+|+..|+.+++++|+++|+|++++|..|+|
T Consensus 143 ~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~T 220 (269)
T 4b93_B 143 AKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRT 220 (269)
T ss_dssp CCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCC
T ss_pred CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCC
Confidence 77777777777777765 6777777888888888888888888888888888888888888877
No 16
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.6e-38 Score=265.31 Aligned_cols=213 Identities=21% Similarity=0.220 Sum_probs=183.2
Q ss_pred CCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccC-CCCccHHHHHHhhCCCcccccc------------------c
Q psy9957 36 PKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTAN-VDGLTALHQVSKSASTLPLHSL------------------N 96 (251)
Q Consensus 36 ~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~tpLh~a~~~~~~~~~~~~------------------~ 96 (251)
+...+..|.|+||.|+..+. +++++|+. .+++..+ ..|+||||+|+..|+.++++.+ +
T Consensus 87 ~~~~~~~g~t~L~~Aa~~~~-~~~~~L~~--~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d 163 (373)
T 2fo1_E 87 PTEPEPESPIKLHTEAAGSY-AITEPITR--ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMD 163 (373)
T ss_dssp -------CCCHHHHHHHSSS-CCCSCCST--TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCC
T ss_pred ccCCCCCCccHHHHHhcCCc-hHHHHhcc--ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCC
Confidence 34667889999999999654 77777754 5677787 6899999999999999887764 5
Q ss_pred cCCCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcC---CCCcccccCCCchHHHHH
Q psy9957 97 CGPGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMG---NKPKKIKFSSGCVFLAAC 173 (251)
Q Consensus 97 ~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~l~~a~ 173 (251)
..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|++.+ .++...+..+.++++.|+
T Consensus 164 ~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~ 243 (373)
T 2fo1_E 164 CDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVA 243 (373)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHH
T ss_pred CCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999987 678888888999999999
Q ss_pred hcC---CHHHHHHHHHcCCCCcc--------cCCCCCchhhhc----------------CCCCCCCCCCCCcHHHHHHHh
Q psy9957 174 ASS---DKEEVLNLLKSGADINT--------ANVDGLTALHQA----------------GADLNFQDYDGWTPLHAAAHW 226 (251)
Q Consensus 174 ~~~---~~~~~~~Ll~~~~~~~~--------~~~~g~t~l~~a----------------~~~~~~~~~~g~t~l~~A~~~ 226 (251)
..+ ..+++++|+++|++++. .+..|.||||+| +++++.+|..|.||||+|+..
T Consensus 244 ~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~ 323 (373)
T 2fo1_E 244 HNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQE 323 (373)
T ss_dssp HSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHH
T ss_pred HhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHc
Confidence 887 78899999999999886 567899999988 489999999999999999999
Q ss_pred CcHHHHHHHHhCCCCCCcccccCCC
Q psy9957 227 AQREACQILVENFCDMDVKNYVVST 251 (251)
Q Consensus 227 ~~~~i~~~Ll~~ga~~~~~d~~g~t 251 (251)
|+.+++++|+++|++++.+|..|+|
T Consensus 324 g~~~iv~~Ll~~gad~~~~d~~g~t 348 (373)
T 2fo1_E 324 GRIEVVMYLIQQGASVEAVDATDHT 348 (373)
T ss_dssp TCHHHHHHHHHTTCCSSCCCSSSCC
T ss_pred CCHHHHHHHHHcCCCccCCCCCCCC
Confidence 9999999999999999999999987
No 17
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=8.9e-38 Score=244.52 Aligned_cols=209 Identities=18% Similarity=0.127 Sum_probs=190.9
Q ss_pred CCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHHHhhCCCcccccc-----------ccCCCchhh
Q psy9957 36 PKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSL-----------NCGPGCVFL 104 (251)
Q Consensus 36 ~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~-----------~~~~~t~l~ 104 (251)
++..+..+.|+|+.|+..|+.+++++|++.|++++..+..|.||||+|++.|+.++++.+ +..|.||||
T Consensus 2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~ 81 (240)
T 3eu9_A 2 MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLH 81 (240)
T ss_dssp CCCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHH
T ss_pred ccccccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhH
Confidence 345677889999999999999999999999999999999999999999999999999887 244789999
Q ss_pred HHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCC-HHHHHH
Q psy9957 105 AACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSD-KEEVLN 183 (251)
Q Consensus 105 ~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~-~~~~~~ 183 (251)
.|+..++.+++++|++.|++++.++..|.||||+|+..++.+++++|++.|.++...+..+.++++.|+..+. .++++.
T Consensus 82 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~ 161 (240)
T 3eu9_A 82 WATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRL 161 (240)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999997766 688889
Q ss_pred HHHcCCCCcccCC-CCCchhhhc---------------CCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCc
Q psy9957 184 LLKSGADINTANV-DGLTALHQA---------------GADLNFQDYDGWTPLHAAAHWAQREACQILVENFCDMDV 244 (251)
Q Consensus 184 Ll~~~~~~~~~~~-~g~t~l~~a---------------~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~ 244 (251)
|++.|++++..+. .|.||||+| |++++.+|..|.||||+|+..++.+++++|+++|++...
T Consensus 162 L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~ 238 (240)
T 3eu9_A 162 LLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAKGY 238 (240)
T ss_dssp HHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC-----
T ss_pred HHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhccCc
Confidence 9999999999987 899999988 899999999999999999999999999999999987654
No 18
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1e-37 Score=256.80 Aligned_cols=214 Identities=23% Similarity=0.285 Sum_probs=197.1
Q ss_pred ccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCC-CccHHHHHHhhCCCcccccc----------ccCCCchhhHH
Q psy9957 38 KIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVD-GLTALHQVSKSASTLPLHSL----------NCGPGCVFLAA 106 (251)
Q Consensus 38 ~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~tpLh~a~~~~~~~~~~~~----------~~~~~t~l~~a 106 (251)
+.+.+|.|+||.|++.|+.++|++||++|+++|.++.. |+||||+|++.|+.++++++ +..+.++++.+
T Consensus 20 ~~~~~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~ 99 (337)
T 4g8k_A 20 RAAVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILA 99 (337)
T ss_dssp -CHHHHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHH
Confidence 45567889999999999999999999999999988764 99999999999999999987 56778999999
Q ss_pred HhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCccc----------ccCCCchHHHHHhcC
Q psy9957 107 CASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKI----------KFSSGCVFLAACASS 176 (251)
Q Consensus 107 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~----------~~~~~~~l~~a~~~~ 176 (251)
+..+...++..+++.+++++.+|..|.||+|+|+..|+.+++++|++.|+++... ...+.++||.|+..|
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g 179 (337)
T 4g8k_A 100 AIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKG 179 (337)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHT
T ss_pred HhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCC
Confidence 9999999999999999999999999999999999999999999999999877543 234678999999999
Q ss_pred CHHHHHHHHH-cCCCCcccCCCCCchhhhc-------------------CCCCCCCCCCCCcHHHHHHHhCcHHHHHHHH
Q psy9957 177 DKEEVLNLLK-SGADINTANVDGLTALHQA-------------------GADLNFQDYDGWTPLHAAAHWAQREACQILV 236 (251)
Q Consensus 177 ~~~~~~~Ll~-~~~~~~~~~~~g~t~l~~a-------------------~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll 236 (251)
+.+++++|++ .|++++.+|..|.|++|.+ |++++.+|..|+||||+|+..++.+++++|+
T Consensus 180 ~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll 259 (337)
T 4g8k_A 180 HVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLL 259 (337)
T ss_dssp CHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHH
Confidence 9999999995 6999999999999999854 8899999999999999999999999999999
Q ss_pred hC-CCCCCcccccCCC
Q psy9957 237 EN-FCDMDVKNYVVST 251 (251)
Q Consensus 237 ~~-ga~~~~~d~~g~t 251 (251)
+. |++++.+|..|+|
T Consensus 260 ~~~~~~vn~~d~~G~T 275 (337)
T 4g8k_A 260 EQEHIEINDTDSDGKT 275 (337)
T ss_dssp TSTTCCTTCBCTTSCB
T ss_pred HhcCCcccCcCCCCCC
Confidence 85 8999999999987
No 19
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=4.2e-38 Score=250.35 Aligned_cols=225 Identities=18% Similarity=0.136 Sum_probs=196.4
Q ss_pred cccchhHHHHHHHHHHHHHhhccCCCccccCCCCCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHH
Q psy9957 3 ETRSSSALFKRAEQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQ 82 (251)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~ 82 (251)
.+...++..+..+-++.++.. +.+++..+..|.||||+|+..|+.+++++|+++|++++..+..|+||||+
T Consensus 5 t~L~~A~~~g~~~~v~~Ll~~---------g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 75 (261)
T 2xai_A 5 SPMHEAAIHGHQLSLRNLISQ---------GWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFN 75 (261)
T ss_dssp CHHHHHHHHTCHHHHHHHHHT---------TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHC---------CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence 345667888888888777643 55677888899999999999999999999999999999999999999999
Q ss_pred HHhhCCCcccccc---------ccCCCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhh
Q psy9957 83 VSKSASTLPLHSL---------NCGPGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSE 153 (251)
Q Consensus 83 a~~~~~~~~~~~~---------~~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~ 153 (251)
|+..|+.++++.+ +..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|++
T Consensus 76 A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 155 (261)
T 2xai_A 76 ACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLE 155 (261)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSCSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHH
Confidence 9999999999887 4568899999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCCCCCchhhhcC---------------------CCCCCC
Q psy9957 154 MGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQAG---------------------ADLNFQ 212 (251)
Q Consensus 154 ~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~---------------------~~~~~~ 212 (251)
.|++++. +..+.+++|.|+..++.+++++|+++|++++.+|..|.||+|+|. ++++.+
T Consensus 156 ~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~~~~~~~ll~~~~~~~l~~~~~~~~r 234 (261)
T 2xai_A 156 SGADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPESPLAQLFLEREGPPSLMQLCRLRIR 234 (261)
T ss_dssp HTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTTCTHHHHHHHC-CCCCHHHHHHHHHH
T ss_pred cCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhccccccHHHHHHhccCCccHHHHHHHHHH
Confidence 9999885 778899999999999999999999999999999999999999871 233355
Q ss_pred CCCCCcHHHHHHHhCcHHHHHHHHh
Q psy9957 213 DYDGWTPLHAAAHWAQREACQILVE 237 (251)
Q Consensus 213 ~~~g~t~l~~A~~~~~~~i~~~Ll~ 237 (251)
+..|.||+|.|.+...++.++-++.
T Consensus 235 ~~~g~t~l~~~~~~~~p~~l~~~l~ 259 (261)
T 2xai_A 235 KCFGIQQHHKITKLVLPEDLKQFLL 259 (261)
T ss_dssp TTSCTTCGGGGGGSSSCHHHHHHHT
T ss_pred HHhchhccccCcccCCcHHHHHHHh
Confidence 6677777777776666665554443
No 20
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=6e-37 Score=238.44 Aligned_cols=186 Identities=23% Similarity=0.248 Sum_probs=140.4
Q ss_pred CChHHHHHHhcCCHHHHHHHHHcCCCCcc-cCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHHHHHHHHHc
Q psy9957 43 SGCVFLAACASSDKEEVLNLLKSGADINT-ANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLKS 121 (251)
Q Consensus 43 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~ 121 (251)
|.||||.|+..|+.++++.|++.+.++.. .+..|+||||+ |+..|+.+++++|++.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~-----------------------A~~~~~~~~v~~Ll~~ 58 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHW-----------------------SVSFQAHEITSFLLSK 58 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHH-----------------------HHHTTCHHHHHHHHHT
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHH-----------------------HHHcCCHHHHHHHHhc
Confidence 68999999999999999999999887654 78899999999 5556666666666666
Q ss_pred C--CCCcc-CCCCCCcHHHHHHHhCCcchhhhhhhcC--CCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCC
Q psy9957 122 G--ADINT-ANVDGLTALHQLKRWEESETNRQPSEMG--NKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANV 196 (251)
Q Consensus 122 g--~~~~~-~~~~g~t~l~~A~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 196 (251)
| .+++. ++..|.||||+|+..|+.+++++|++.| .++...+..+.++++.|+..++.+++++|+++|++++.++.
T Consensus 59 ~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 138 (228)
T 2dzn_A 59 MENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDK 138 (228)
T ss_dssp CTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCT
T ss_pred cccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCC
Confidence 6 33333 5556666666666666666666666665 55555555566666666666666666666666666666666
Q ss_pred CCCchhhhc---------------C-CCCCCCCCCCCcHHHHHHHhCcHHHHHHHH-hCCCCCCcccccCCC
Q psy9957 197 DGLTALHQA---------------G-ADLNFQDYDGWTPLHAAAHWAQREACQILV-ENFCDMDVKNYVVST 251 (251)
Q Consensus 197 ~g~t~l~~a---------------~-~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll-~~ga~~~~~d~~g~t 251 (251)
.|.||||+| + .+++.+|..|+||||+|+..++.+++++|+ ++|+|++.+|..|+|
T Consensus 139 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t 210 (228)
T 2dzn_A 139 FNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAK 210 (228)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCB
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCc
Confidence 666666655 4 777888899999999999999999999999 899999999999987
No 21
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=5.8e-38 Score=261.86 Aligned_cols=209 Identities=21% Similarity=0.195 Sum_probs=191.1
Q ss_pred CCCCccc-cCCChHHHHHHhcCCHHHHHHHH--------HcCCCCcccCCCCccHHHHHHhhCCCcccccc---------
Q psy9957 34 NKPKKIK-FSSGCVFLAACASSDKEEVLNLL--------KSGADINTANVDGLTALHQVSKSASTLPLHSL--------- 95 (251)
Q Consensus 34 ~~~~~~~-~~~~t~L~~A~~~~~~~~v~~Ll--------~~g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~--------- 95 (251)
.+.+..+ ..|.||||+|+..|+.+++++|+ ++|++++..|..|+||||+|+..|+.++++++
T Consensus 115 ~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~ 194 (373)
T 2fo1_E 115 ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTI 194 (373)
T ss_dssp TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC
T ss_pred ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcc
Confidence 3455666 68999999999999998888776 78999999999999999999999999999887
Q ss_pred -ccCCCchhhHHHhcCCHHHHHHHHHcC---CCCccCCCCCCcHHHHHHHhC---CcchhhhhhhcCCCCcc--------
Q psy9957 96 -NCGPGCVFLAACASSDKEEVLNLLKSG---ADINTANVDGLTALHQLKRWE---ESETNRQPSEMGNKPKK-------- 160 (251)
Q Consensus 96 -~~~~~t~l~~a~~~~~~~~v~~Ll~~g---~~~~~~~~~g~t~l~~A~~~~---~~~~~~~l~~~~~~~~~-------- 160 (251)
+..|.||||+|+..|+.+++++|++.+ ++++.++..|.||||+|+..+ +.+++++|++.|.++..
T Consensus 195 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~ 274 (373)
T 2fo1_E 195 YNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDS 274 (373)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSS
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCc
Confidence 577889999999999999999999998 799999999999999999998 88999999999988875
Q ss_pred cccCCCchHHHHHhcCCHHHHHHHHHcC-CCCcccCCCCCchhhhc---------------CCCCCCCCCCCCcHHHHHH
Q psy9957 161 IKFSSGCVFLAACASSDKEEVLNLLKSG-ADINTANVDGLTALHQA---------------GADLNFQDYDGWTPLHAAA 224 (251)
Q Consensus 161 ~~~~~~~~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~g~t~l~~a---------------~~~~~~~~~~g~t~l~~A~ 224 (251)
.+..+.+++|.|+..++.+++++|++++ ++++.+|..|.||||+| |++++.+|..|.||||+|+
T Consensus 275 ~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~ 354 (373)
T 2fo1_E 275 EKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQ 354 (373)
T ss_dssp SSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHH
T ss_pred ccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHH
Confidence 4557899999999999999999999875 99999999999999988 9999999999999999999
Q ss_pred HhCcHHHHHHHHhCCCCC
Q psy9957 225 HWAQREACQILVENFCDM 242 (251)
Q Consensus 225 ~~~~~~i~~~Ll~~ga~~ 242 (251)
..|+.+++++|+++|++.
T Consensus 355 ~~g~~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 355 ANNHHNIVDIFDRCRPER 372 (373)
T ss_dssp HTTCHHHHHHHHTTC---
T ss_pred HcCCHHHHHHHHhcCccc
Confidence 999999999999999863
No 22
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=4.1e-37 Score=239.94 Aligned_cols=208 Identities=25% Similarity=0.250 Sum_probs=142.1
Q ss_pred ccchhHHHHHHHHHHHHHhhccCCCccccCCCCCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHH
Q psy9957 4 TRSSSALFKRAEQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQV 83 (251)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a 83 (251)
+...++..++.+.++.++..... ..+..+..|.||||+|+..|+.+++++|+++|++++..+..|+||||+
T Consensus 9 ~l~~A~~~g~~~~v~~ll~~~~~--------~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~- 79 (231)
T 3aji_A 9 MICNLAYSGKLDELKERILADKS--------LATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHI- 79 (231)
T ss_dssp HHHHHHHHTCHHHHHHHHHHCGG--------GGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHH-
T ss_pred hHHHHHHhCCHHHHHHHHHhchh--------hhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHH-
Confidence 34566667777777776654321 123445667777777777777777777777777777777777777777
Q ss_pred HhhCCCccccccccCCCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCccccc
Q psy9957 84 SKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKF 163 (251)
Q Consensus 84 ~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~ 163 (251)
|+..++.+++++|++.|++++.++..|.||||+|+..++.+++++|++.|.++...+.
T Consensus 80 ----------------------A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 137 (231)
T 3aji_A 80 ----------------------AASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDH 137 (231)
T ss_dssp ----------------------HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred ----------------------HHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 6666666666666666666666666666666666666666666666666666666666
Q ss_pred CCCchHHHHHhcCCHHHHHHHHHcCCCCcccCCCCCchhhhc---------------CCCCCCCCCCCCcHHHHHHHhCc
Q psy9957 164 SSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQA---------------GADLNFQDYDGWTPLHAAAHWAQ 228 (251)
Q Consensus 164 ~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a---------------~~~~~~~~~~g~t~l~~A~~~~~ 228 (251)
.+.++++.|+..++.+++++|+++|++++.+|..|.||||+| |++++.+|..|.||||+|+..++
T Consensus 138 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 217 (231)
T 3aji_A 138 YDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLG 217 (231)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHH
Confidence 666666666666666666666666666666655555555554 56666677778888888888888
Q ss_pred HHHHHHHHhCCCCC
Q psy9957 229 REACQILVENFCDM 242 (251)
Q Consensus 229 ~~i~~~Ll~~ga~~ 242 (251)
.+++++|.++|+++
T Consensus 218 ~~i~~lL~~~~a~i 231 (231)
T 3aji_A 218 LILKRLAEGEEASM 231 (231)
T ss_dssp HHHHHHHHHHHHCC
T ss_pred HHHHHHHccccccC
Confidence 88888888877653
No 23
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=2.4e-37 Score=244.92 Aligned_cols=184 Identities=23% Similarity=0.246 Sum_probs=150.7
Q ss_pred CCcccCCCCccHHHHHHhhC-------------CCcccccc-----------ccCCCchhhHHHhcCCHHHHHHHHHcCC
Q psy9957 68 DINTANVDGLTALHQVSKSA-------------STLPLHSL-----------NCGPGCVFLAACASSDKEEVLNLLKSGA 123 (251)
Q Consensus 68 ~~~~~~~~g~tpLh~a~~~~-------------~~~~~~~~-----------~~~~~t~l~~a~~~~~~~~v~~Ll~~g~ 123 (251)
++|.+|..|+||||+|+..| +.++++.+ +..|.||||+|+..|+.+++++|++.|+
T Consensus 2 dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 81 (253)
T 1yyh_A 2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA 81 (253)
T ss_dssp --------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 67889999999999999987 77777766 5788999999999999999999999999
Q ss_pred CCccCCCCCCcHHHHHHHhCCcchhhhhhhcCC-CCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCCCCCchh
Q psy9957 124 DINTANVDGLTALHQLKRWEESETNRQPSEMGN-KPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTAL 202 (251)
Q Consensus 124 ~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l 202 (251)
+++.++..|.||||+|+..++.+++++|++.+. ++...+..+.++++.|+..++.++++.|+++|++++.+|..|.|||
T Consensus 82 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L 161 (253)
T 1yyh_A 82 DANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSAL 161 (253)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHH
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 999999999999999999999999999999987 7778888999999999999999999999999999999999999999
Q ss_pred hhc---------------CCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCcccccCCC
Q psy9957 203 HQA---------------GADLNFQDYDGWTPLHAAAHWAQREACQILVENFCDMDVKNYVVST 251 (251)
Q Consensus 203 ~~a---------------~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~d~~g~t 251 (251)
|+| |++++.+|..|.||||+|+..++.+++++|+++|++++.+|..|+|
T Consensus 162 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t 225 (253)
T 1yyh_A 162 HWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRL 225 (253)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCC
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCC
Confidence 988 8999999999999999999999999999999999999999999987
No 24
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=1.6e-36 Score=236.53 Aligned_cols=188 Identities=24% Similarity=0.264 Sum_probs=179.3
Q ss_pred cCCChHHHHHHhcCCHHHHHHHHHcCC-CCcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHHHHHHHH
Q psy9957 41 FSSGCVFLAACASSDKEEVLNLLKSGA-DINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLL 119 (251)
Q Consensus 41 ~~~~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll 119 (251)
..+.+||+.|+..|+.+.++.|++.+. .++..+..|+||||+ |+..|+.+++++|+
T Consensus 4 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-----------------------A~~~g~~~~v~~Ll 60 (231)
T 3aji_A 4 CVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHW-----------------------ACSAGHTEIVEFLL 60 (231)
T ss_dssp CCSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHH-----------------------HHHHTCHHHHHHHH
T ss_pred ccccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHH-----------------------HHHcCcHHHHHHHH
Confidence 357789999999999999999998754 467788999999999 99999999999999
Q ss_pred HcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCCCCC
Q psy9957 120 KSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGL 199 (251)
Q Consensus 120 ~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~ 199 (251)
+.|++++.++..|.||||+|+..++.+++++|++.|.++...+..+.++++.|+..++.+++++|+++|++++..+..|.
T Consensus 61 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~ 140 (231)
T 3aji_A 61 QLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDA 140 (231)
T ss_dssp HTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred HhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhc---------------CCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCcccccCCC
Q psy9957 200 TALHQA---------------GADLNFQDYDGWTPLHAAAHWAQREACQILVENFCDMDVKNYVVST 251 (251)
Q Consensus 200 t~l~~a---------------~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~d~~g~t 251 (251)
||||+| +++++.+|..|.||||+|+..++.+++++|+++|++++.+|..|+|
T Consensus 141 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t 207 (231)
T 3aji_A 141 TAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKT 207 (231)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCC
T ss_pred cHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC
Confidence 999988 8999999999999999999999999999999999999999999987
No 25
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.8e-36 Score=225.25 Aligned_cols=159 Identities=30% Similarity=0.393 Sum_probs=145.9
Q ss_pred hHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHHHHHHHHHcCCC
Q psy9957 45 CVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLKSGAD 124 (251)
Q Consensus 45 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~g~~ 124 (251)
+.|+.||+.|+.++|+.||++|+++|.+|..|+||||+ |+..++.++++.|++.|++
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~-----------------------a~~~~~~~~~~~ll~~gad 62 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHH-----------------------AAENGHKEVVKLLISKGAD 62 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH-----------------------HHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHH-----------------------HHHcCCHHHHHHHHhcccc
Confidence 46999999999999999999999999999999999999 9999999999999999999
Q ss_pred CccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCCCCCchhhh
Q psy9957 125 INTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQ 204 (251)
Q Consensus 125 ~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~ 204 (251)
++.+|..|+||||+|+..|+.+++++|++.|++++.++..+.+|||+|+..++.+++++|+++|++++
T Consensus 63 ~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~------------ 130 (169)
T 4gpm_A 63 VNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVN------------ 130 (169)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT------------
T ss_pred hhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc------------
Confidence 99999999999999999999999999999999999999999999999999999999999999876654
Q ss_pred cCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCc
Q psy9957 205 AGADLNFQDYDGWTPLHAAAHWAQREACQILVENFCDMDV 244 (251)
Q Consensus 205 a~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~ 244 (251)
.+|..|+||||+|+..|+.+++++|+++||+++-
T Consensus 131 ------~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 131 ------TSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp ------CCCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred ------ccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence 5566789999999999999999999999999864
No 26
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=8.1e-36 Score=231.39 Aligned_cols=197 Identities=17% Similarity=0.109 Sum_probs=147.2
Q ss_pred cccCCCCCcc-ccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHHHhhCCCcccccc-----------cc
Q psy9957 30 SEMGNKPKKI-KFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSL-----------NC 97 (251)
Q Consensus 30 ~~~~~~~~~~-~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~-----------~~ 97 (251)
.+.+.+.+.. +..|.||||+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.++++.+ +.
T Consensus 11 l~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 90 (223)
T 2f8y_A 11 IYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMH 90 (223)
T ss_dssp EETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCT
T ss_pred HHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCC
Confidence 3445555544 78899999999999999999999999999999999999999996666666655554 34
Q ss_pred CCCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCC
Q psy9957 98 GPGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSD 177 (251)
Q Consensus 98 ~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~ 177 (251)
.|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..++.+++++|++.|+++...+..+.++++.|+..++
T Consensus 91 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 170 (223)
T 2f8y_A 91 DGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGS 170 (223)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCC
Confidence 45566666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred HHHHHHHHHcCCCCcccCCCCCchhhhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCc
Q psy9957 178 KEEVLNLLKSGADINTANVDGLTALHQAGADLNFQDYDGWTPLHAAAHWAQREACQILVENFCDMDV 244 (251)
Q Consensus 178 ~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~ 244 (251)
.+++++|+++| ++++.+|..|.||||+|+..++.+++++|+++|+....
T Consensus 171 ~~~v~~Ll~~g------------------a~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~~ 219 (223)
T 2f8y_A 171 YETAKVLLDHF------------------ANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRSP 219 (223)
T ss_dssp HHHHHHHHHTT------------------CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSCC
T ss_pred HHHHHHHHHcC------------------CCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCccc
Confidence 66666666665 44556677899999999999999999999999987543
No 27
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=5.1e-37 Score=247.18 Aligned_cols=206 Identities=16% Similarity=0.049 Sum_probs=147.1
Q ss_pred HHHHHHHHHHHhhccCCCccccCCCCCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHHHhhCCCc
Q psy9957 11 FKRAEQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTL 90 (251)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~~~~~~~ 90 (251)
..+..++.+++.+. .++..+..|.||||+|+..|+.++|++|+++|++++..+ |+||||+|+..|+.+
T Consensus 9 ~~~~~~v~~lL~~~----------~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g~~~ 76 (285)
T 3kea_A 9 TWKSKQLKSFLSSK----------DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTK 76 (285)
T ss_dssp GCCHHHHHHHHHST----------TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT--TCCHHHHHTTSSSCH
T ss_pred hcCHHHHHHHHHhC----------CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC--CCCHHHHHHHcCCHH
Confidence 34456666666442 356788899999999999999999999999999998884 999999977777666
Q ss_pred ccccc----------ccCCCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCC-CcHHHHHHHhCCcchhhhhhhcCCCCc
Q psy9957 91 PLHSL----------NCGPGCVFLAACASSDKEEVLNLLKSGADINTANVDG-LTALHQLKRWEESETNRQPSEMGNKPK 159 (251)
Q Consensus 91 ~~~~~----------~~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g-~t~l~~A~~~~~~~~~~~l~~~~~~~~ 159 (251)
+++.+ +..|.||||+|+..|+.+++++|++.|++++.++..| .||||+|+..|+.+++++|++.|.+..
T Consensus 77 ~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 156 (285)
T 3kea_A 77 IVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF 156 (285)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTC
T ss_pred HHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccc
Confidence 66655 4455666666666666666666666666666666666 566666666666666666666665542
Q ss_pred ccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCCCCCchhhhcCCCCCCCCCCCCcH-HHHHHHhCcHHHHHHHHhC
Q psy9957 160 KIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQAGADLNFQDYDGWTP-LHAAAHWAQREACQILVEN 238 (251)
Q Consensus 160 ~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~g~t~-l~~A~~~~~~~i~~~Ll~~ 238 (251)
.. ..+.+++|.|+..++.+++++|+++|++ ++.+|..|.|| ||+|+..++.+++++|+++
T Consensus 157 ~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad------------------~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~ 217 (285)
T 3kea_A 157 DL-AILLSCIHITIKNGHVDMMILLLDYMTS------------------TNTNNSLLFIPDIKLAIDNKDIEMLQALFKY 217 (285)
T ss_dssp CC-STHHHHHHHHHHTTCHHHHHHHHHHHHH------------------TCTTCCCBCCTTHHHHHHHTCHHHHHHHTTS
T ss_pred cc-cCCccHHHHHHHcChHHHHHHHHHcCCC------------------CCcccCCCCChHHHHHHHcCCHHHHHHHHHc
Confidence 22 1555666666666666666666666544 45555666676 7777777778888888888
Q ss_pred CCCCCcccc
Q psy9957 239 FCDMDVKNY 247 (251)
Q Consensus 239 ga~~~~~d~ 247 (251)
|+|++.+|.
T Consensus 218 gad~~~~~~ 226 (285)
T 3kea_A 218 DINIYSANL 226 (285)
T ss_dssp CBCSTTTTG
T ss_pred CCCCCCCCh
Confidence 877777764
No 28
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=2.8e-36 Score=235.47 Aligned_cols=195 Identities=18% Similarity=0.100 Sum_probs=163.1
Q ss_pred CCChHHHHHHhcCCHHHHHHHHHc-CCCCcccCCCCccHHHHHHhhCCCcccccc---------------ccCCCchhhH
Q psy9957 42 SSGCVFLAACASSDKEEVLNLLKS-GADINTANVDGLTALHQVSKSASTLPLHSL---------------NCGPGCVFLA 105 (251)
Q Consensus 42 ~~~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~---------------~~~~~t~l~~ 105 (251)
.|.||||.|+..|+.++++.|++. |++++..|..|+||||+|+..|+.++++.+ +..|.||||+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 588999999999999999999998 999999999999999999988888877766 2367888888
Q ss_pred HHhcCCHHHHHHHHHcCCCCccCCC-------------CCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHH
Q psy9957 106 ACASSDKEEVLNLLKSGADINTANV-------------DGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAA 172 (251)
Q Consensus 106 a~~~~~~~~v~~Ll~~g~~~~~~~~-------------~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a 172 (251)
|+..|+.+++++|++.|++++.++. .|.||||+|+..|+.+++++|++.|++++..+..+.+++|+|
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A 161 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHIL 161 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 8888888888888888888887665 688888888888888888888888888888888888888888
Q ss_pred HhcCCHHHH----HHHHHcCCCCcccCCCCCchhhhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCccccc
Q psy9957 173 CASSDKEEV----LNLLKSGADINTANVDGLTALHQAGADLNFQDYDGWTPLHAAAHWAQREACQILVENFCDMDVKNYV 248 (251)
Q Consensus 173 ~~~~~~~~~----~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~d~~ 248 (251)
+..++.+++ ++|+++|+++..... .+.+|..|.||||+|+..|+.+++++|+++|+++......
T Consensus 162 ~~~~~~~~~~~i~~~Ll~~g~~~~~~~~------------~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~~~~~~ 229 (232)
T 2rfa_A 162 ILQPNKTFACQMYNLLLSYDGGDHLKSL------------ELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIAAAHHH 229 (232)
T ss_dssp HTCSCHHHHHHHHHHHHHTTCSCSSCCG------------GGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC------
T ss_pred HHcCChHHHHHHHHHHHhcCCchhhhhh------------hccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccchhhhcc
Confidence 888888877 778888776642211 2567889999999999999999999999999877665443
No 29
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=5.8e-36 Score=246.79 Aligned_cols=214 Identities=23% Similarity=0.203 Sum_probs=190.8
Q ss_pred ccccCCChHHHHHHhcCCHHHHHHHHHc-CCCCcccCCCCccHHHHHHhhCCCcccccc----------ccCCCchhhHH
Q psy9957 38 KIKFSSGCVFLAACASSDKEEVLNLLKS-GADINTANVDGLTALHQVSKSASTLPLHSL----------NCGPGCVFLAA 106 (251)
Q Consensus 38 ~~~~~~~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~----------~~~~~t~l~~a 106 (251)
..+..+.++|+.|++.|+.+.|+.|+.. +.+++..|..|+||||+|+..|+.++++++ +..|.||||+|
T Consensus 19 ~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 98 (351)
T 3utm_A 19 LTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNA 98 (351)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred eeccccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHH
Confidence 3455678899999999999999999865 999999999999999999999999988877 57788999999
Q ss_pred HhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHH---------------
Q psy9957 107 CASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLA--------------- 171 (251)
Q Consensus 107 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~--------------- 171 (251)
+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|++.|.++......+.++++.
T Consensus 99 ~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~ 178 (351)
T 3utm_A 99 CSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFK 178 (351)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhc
Confidence 99999999999999999999999999999999999999999999999999988877777776554
Q ss_pred ------HHhcCCHHHHHHHHHcCCCCcccCCCCCchhhhc------------------CCCCCCCCCCCCcHHHHHHHhC
Q psy9957 172 ------ACASSDKEEVLNLLKSGADINTANVDGLTALHQA------------------GADLNFQDYDGWTPLHAAAHWA 227 (251)
Q Consensus 172 ------a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a------------------~~~~~~~~~~g~t~l~~A~~~~ 227 (251)
++..+..+.+..++..+......+..|.||||+| +++++.+|..|.||||+|+..|
T Consensus 179 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g 258 (351)
T 3utm_A 179 GHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERA 258 (351)
T ss_dssp HHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred ccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcC
Confidence 5666777777777776666666788899999987 7899999999999999999999
Q ss_pred cHHHHHHHHhCCCCCCcccccCCC
Q psy9957 228 QREACQILVENFCDMDVKNYVVST 251 (251)
Q Consensus 228 ~~~i~~~Ll~~ga~~~~~d~~g~t 251 (251)
+.+++++|+++|++++.+|..|+|
T Consensus 259 ~~~~v~~Ll~~ga~~n~~d~~g~t 282 (351)
T 3utm_A 259 HNDVMEVLHKHGAKMNALDSLGQT 282 (351)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred CHHHHHHHHHCCCCCCCcCCCCCC
Confidence 999999999999999999999987
No 30
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=2.6e-37 Score=242.06 Aligned_cols=196 Identities=17% Similarity=0.116 Sum_probs=132.3
Q ss_pred ccccCCChHHHHHHhcCCHHHHHHHHHcCC----CCcccCCCCccHHHHHHhhCCCcccccc----------ccCCCchh
Q psy9957 38 KIKFSSGCVFLAACASSDKEEVLNLLKSGA----DINTANVDGLTALHQVSKSASTLPLHSL----------NCGPGCVF 103 (251)
Q Consensus 38 ~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~----~~~~~~~~g~tpLh~a~~~~~~~~~~~~----------~~~~~t~l 103 (251)
.++.+|.||||+|+..|+.++++.|++.+. +++..+..|+||||+|+..|+.++++.+ +..|.|||
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 82 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPL 82 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHH
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 467789999999999999999999987754 7899999999999996665555555544 34445555
Q ss_pred hHHHhcCCHHHHHHHHHcCCC------CccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCccccc-CCCchHHHHHhcC
Q psy9957 104 LAACASSDKEEVLNLLKSGAD------INTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKF-SSGCVFLAACASS 176 (251)
Q Consensus 104 ~~a~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~l~~a~~~~ 176 (251)
|+|+..++.+++++|++.|++ ++.++..|.||||+|+..|+.+++++|++.|+++...+. .+.+++|+|+..+
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~ 162 (236)
T 1ikn_D 83 HLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQ 162 (236)
T ss_dssp HHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred HHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcC
Confidence 555555555555555555543 234455555555555555555555555555555555554 5555555555555
Q ss_pred CHHHHHHHHHcCCCCcccCCCCCchhhhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCC--cccccCCC
Q psy9957 177 DKEEVLNLLKSGADINTANVDGLTALHQAGADLNFQDYDGWTPLHAAAHWAQREACQILVENFCDMD--VKNYVVST 251 (251)
Q Consensus 177 ~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~--~~d~~g~t 251 (251)
+.+++++|+++| ++++.+|..|.||||+|+..++.+++++|+++|+++. .++..|.|
T Consensus 163 ~~~~v~~Ll~~g------------------a~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~ 221 (236)
T 1ikn_D 163 NPDLVSLLLKCG------------------ADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEE 221 (236)
T ss_dssp CHHHHHHHHTTT------------------CCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTT
T ss_pred CHHHHHHHHHcC------------------CCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHH
Confidence 555555555554 5556666778888888899999999999999999875 77877765
No 31
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.9e-36 Score=239.38 Aligned_cols=201 Identities=17% Similarity=0.086 Sum_probs=146.5
Q ss_pred ccchhHHHHHHHHHHHHHhhccCCCccccCCCCCccccCCChHHHHHHhcCCH-HHHHHHHHcCCCCcccCCCCccHHHH
Q psy9957 4 TRSSSALFKRAEQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDK-EEVLNLLKSGADINTANVDGLTALHQ 82 (251)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~-~~v~~Ll~~g~~~~~~~~~g~tpLh~ 82 (251)
++..|+..++.+-++.++..... .........+..+..+.|||+.|+..+.. ++++.|+++|+++|..|.+|+||||+
T Consensus 14 ~L~~A~~~G~~~~v~~LL~~~~~-~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~ 92 (269)
T 4b93_B 14 KLLRAVADGDLEMVRYLLEWTEE-DLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHV 92 (269)
T ss_dssp HHHHHHHTTCHHHHHHHHTCC-----------------------------------------CCCCTTCCCTTSCCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCc-ccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHH
Confidence 46678888888888888754221 11122233456777899999999988765 58899999999999999999999999
Q ss_pred HHhhCCCcccccc----------ccCCCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhh
Q psy9957 83 VSKSASTLPLHSL----------NCGPGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPS 152 (251)
Q Consensus 83 a~~~~~~~~~~~~----------~~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~ 152 (251)
|+..|+.++++++ +..|.||++.|+..++.++++.|++.|++++.+|..|+||||+|+..|+.+++++|+
T Consensus 93 A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll 172 (269)
T 4b93_B 93 AALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLL 172 (269)
T ss_dssp HHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHH
T ss_pred HHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 9999999999887 577889999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCCCCCchhhhc
Q psy9957 153 EMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQA 205 (251)
Q Consensus 153 ~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a 205 (251)
+.|++++..+..+.++||+|+..|+.+++++|+++|++++.+|..|.||||+|
T Consensus 173 ~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A 225 (269)
T 4b93_B 173 QHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCA 225 (269)
T ss_dssp HTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGS
T ss_pred HCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHH
Confidence 99999999999999999999999999999999999888877766666666555
No 32
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.9e-35 Score=231.79 Aligned_cols=214 Identities=18% Similarity=0.119 Sum_probs=149.4
Q ss_pred ccchhHHHHHHHHHHHHHhhccCCCccccCCCCCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHH
Q psy9957 4 TRSSSALFKRAEQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQV 83 (251)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a 83 (251)
+...++..+..+.++..+..- ...+.+++..+..|.||||+|+..|+.+++++|+++|++++..+..|+||||+|
T Consensus 12 ~L~~A~~~g~~~~v~~Ll~~~-----~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A 86 (241)
T 1k1a_A 12 PLHIAVVQGNLPAVHRLVNLF-----QQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLA 86 (241)
T ss_dssp HHHHHHHTTCHHHHHHHHHHH-----HHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHH-----HhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHH
Confidence 445667777777777776421 123556777888999999999999999999999999999999999999999996
Q ss_pred HhhCCCcccccc--------------ccCCCchhhHHHhcCCHHHHHHHHHcCCCCccCC-CCCCcHHHHHHHhCCcchh
Q psy9957 84 SKSASTLPLHSL--------------NCGPGCVFLAACASSDKEEVLNLLKSGADINTAN-VDGLTALHQLKRWEESETN 148 (251)
Q Consensus 84 ~~~~~~~~~~~~--------------~~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~l~~A~~~~~~~~~ 148 (251)
+..++.++++.+ +..|.||||.|+..++.+++++|++.|++++.++ ..|.||||+|+..++.+++
T Consensus 87 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v 166 (241)
T 1k1a_A 87 CEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMV 166 (241)
T ss_dssp HHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHH
T ss_pred HHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHH
Confidence 666665555443 2345566666666666666666666666666555 4566666666666666666
Q ss_pred hhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCCCCCchhhhcCCCCCCCCCCCCcHHHHHHHhCc
Q psy9957 149 RQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQAGADLNFQDYDGWTPLHAAAHWAQ 228 (251)
Q Consensus 149 ~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~g~t~l~~A~~~~~ 228 (251)
++|++.|++++..+..+.+++|.|+..++.+++++|+++| ++++.+|..|.||||+|+..++
T Consensus 167 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g------------------a~~~~~~~~g~tpl~~A~~~~~ 228 (241)
T 1k1a_A 167 QLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSG------------------ADSSLKNCHNDTPLMVARSRRV 228 (241)
T ss_dssp HHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTT------------------CCTTCCCTTSCCTTTTCSSHHH
T ss_pred HHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcC------------------CCCCCcCCCCCCHHHHHHhcCc
Confidence 6666666666666666666666666666666666666655 4555666778888888889999
Q ss_pred HHHHHHHHhCCC
Q psy9957 229 REACQILVENFC 240 (251)
Q Consensus 229 ~~i~~~Ll~~ga 240 (251)
.++++.|.++++
T Consensus 229 ~~i~~~l~~~~a 240 (241)
T 1k1a_A 229 IDILRGKATRPA 240 (241)
T ss_dssp HHHHTC------
T ss_pred HHHHhhhccCCC
Confidence 999999998875
No 33
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=7e-36 Score=238.90 Aligned_cols=205 Identities=16% Similarity=0.099 Sum_probs=164.2
Q ss_pred CCCccccCCChHHHHHHhcCCHHHHHHHHH----cCCCCc----ccCCCCccHHHHHHhh---CCCcccccc--------
Q psy9957 35 KPKKIKFSSGCVFLAACASSDKEEVLNLLK----SGADIN----TANVDGLTALHQVSKS---ASTLPLHSL-------- 95 (251)
Q Consensus 35 ~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~----~g~~~~----~~~~~g~tpLh~a~~~---~~~~~~~~~-------- 95 (251)
..+..+..|.||||.||..|+.++|+.|++ .+++++ ..+..|+||||+|+.. |+.++++++
T Consensus 5 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~ 84 (273)
T 2pnn_A 5 GEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTD 84 (273)
T ss_dssp ------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTT
T ss_pred cCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhcccc
Confidence 345678899999999999999999999886 566665 3578899999999976 888888766
Q ss_pred -------------ccCCCchhhHHHhcCCHHHHHHHHHcCCCCccCCC--------------CCCcHHHHHHHhCCcchh
Q psy9957 96 -------------NCGPGCVFLAACASSDKEEVLNLLKSGADINTANV--------------DGLTALHQLKRWEESETN 148 (251)
Q Consensus 96 -------------~~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~--------------~g~t~l~~A~~~~~~~~~ 148 (251)
+..|.||||+|+..|+.+++++|++.|++++.++. .|.||||+|+..|+.+++
T Consensus 85 ~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v 164 (273)
T 2pnn_A 85 SLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIV 164 (273)
T ss_dssp CHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHH
T ss_pred chhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHH
Confidence 13688999999999999999999999999998887 799999999999999999
Q ss_pred hhhhh---cCCCCcccccCCCchHHHHHhcCC---------HHHHHHHHHcCCCCcccCCCCCchhhhcCCCCCCCCCCC
Q psy9957 149 RQPSE---MGNKPKKIKFSSGCVFLAACASSD---------KEEVLNLLKSGADINTANVDGLTALHQAGADLNFQDYDG 216 (251)
Q Consensus 149 ~~l~~---~~~~~~~~~~~~~~~l~~a~~~~~---------~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~g 216 (251)
++|++ .|++++..+..+.++||+|+..++ .+++++|+++|++++.... .++.+|..|
T Consensus 165 ~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~-----------~~~~~d~~g 233 (273)
T 2pnn_A 165 KFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLK-----------LEEITNRKG 233 (273)
T ss_dssp HHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCC-----------GGGCCCTTS
T ss_pred HHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccc-----------cccccCCCC
Confidence 99999 899999999999999999998887 6888889988877653211 124578899
Q ss_pred CcHHHHHHHhCcHHHHHHHHhCCC-CCCcccccCC
Q psy9957 217 WTPLHAAAHWAQREACQILVENFC-DMDVKNYVVS 250 (251)
Q Consensus 217 ~t~l~~A~~~~~~~i~~~Ll~~ga-~~~~~d~~g~ 250 (251)
.||||+|+..|+.+++++|+++|+ |+......+.
T Consensus 234 ~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~~~~~ 268 (273)
T 2pnn_A 234 LTPLALAASSGKIGVLAYILQREIHEPECRHAAAH 268 (273)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHTC----------
T ss_pred CCHHHHHHHhChHHHHHHHHHCCCCCchhhhhhhh
Confidence 999999999999999999999999 8887766554
No 34
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=2.9e-34 Score=219.12 Aligned_cols=176 Identities=25% Similarity=0.256 Sum_probs=147.9
Q ss_pred cCCChHHHHHHhcCCHHHHHHHHHcCC-CCcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHHHHHHHH
Q psy9957 41 FSSGCVFLAACASSDKEEVLNLLKSGA-DINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLL 119 (251)
Q Consensus 41 ~~~~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll 119 (251)
..+.||||.|+..|+.+.++.|++.+. +++..+..|+||||+ |+..|+.+++++|+
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-----------------------A~~~~~~~~v~~Ll 59 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNI-----------------------AVHNNDIEIAKALI 59 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHH-----------------------HHHHTCHHHHHHHH
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHH-----------------------HHHcCCHHHHHHHH
Confidence 467899999999999999999998865 999999999999999 77777778888888
Q ss_pred HcCCCCccCCCCCCcHHHHHHHhCCcchhhhhh-hcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcC-CCCcccCCC
Q psy9957 120 KSGADINTANVDGLTALHQLKRWEESETNRQPS-EMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSG-ADINTANVD 197 (251)
Q Consensus 120 ~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~ 197 (251)
+.|++++.++..|.||||+|+..|+.+++++|+ ..+.++...+..+.++++.|+..++.+++++|+++| ++++.++..
T Consensus 60 ~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 139 (201)
T 3hra_A 60 DRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDF 139 (201)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTT
T ss_pred HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCC
Confidence 888888877777888888888888888888877 455566667777777888888888888888888777 777777777
Q ss_pred CCchhhhc--------------------CCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCC
Q psy9957 198 GLTALHQA--------------------GADLNFQDYDGWTPLHAAAHWAQREACQILVENF 239 (251)
Q Consensus 198 g~t~l~~a--------------------~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~g 239 (251)
|.||||+| |++++.+|..|.||||+|+..++.+++++|+++|
T Consensus 140 g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 140 GYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp SCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred CCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 88887765 6788888899999999999999999999999987
No 35
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=3.5e-36 Score=250.16 Aligned_cols=230 Identities=14% Similarity=0.092 Sum_probs=202.4
Q ss_pred ccchhHHHHHHHHHHHHHhhccCCCccccCCCCCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHH
Q psy9957 4 TRSSSALFKRAEQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQV 83 (251)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a 83 (251)
++..++..+..+.++.++.. +.+++..+..|.||||+|+..|+.++|++|+++|++++. ..|+||||+|
T Consensus 23 ~L~~Aa~~g~~~~v~~Ll~~---------g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~g~t~L~~A 91 (364)
T 3ljn_A 23 KIHVAARKGQTDEVRRLIET---------GVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL--WHGQKPIHLA 91 (364)
T ss_dssp HHHHHHHHTCHHHHHHHHHT---------TCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC--BTTBCHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHc---------CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc--cCCCCHHHHH
Confidence 34567778888888887743 566778889999999999999999999999999996653 5799999999
Q ss_pred HhhCCCcccccc-------------------------------ccCCCchhhHHHhcC--CHHHHHHHHHcCCCCccCCC
Q psy9957 84 SKSASTLPLHSL-------------------------------NCGPGCVFLAACASS--DKEEVLNLLKSGADINTANV 130 (251)
Q Consensus 84 ~~~~~~~~~~~~-------------------------------~~~~~t~l~~a~~~~--~~~~v~~Ll~~g~~~~~~~~ 130 (251)
+..|+.++++.+ +..|.||||+|+..| +.+++++|++.|++++.+|.
T Consensus 92 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~ 171 (364)
T 3ljn_A 92 VMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDK 171 (364)
T ss_dssp HHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCT
T ss_pred HHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCC
Confidence 999999988776 235899999999999 99999999999999999999
Q ss_pred CCCcHHHHHHHhCCcchhhhhhhcCCC-----CcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCCCCCchhhhc
Q psy9957 131 DGLTALHQLKRWEESETNRQPSEMGNK-----PKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQA 205 (251)
Q Consensus 131 ~g~t~l~~A~~~~~~~~~~~l~~~~~~-----~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a 205 (251)
.|.||||+|+..|+.+++++|++.|.+ ++..+..+.++||+|+..++.+++++|+++|++++.+|..|.||||+|
T Consensus 172 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A 251 (364)
T 3ljn_A 172 ADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLS 251 (364)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 999999999999999999999999988 888888999999999999999999999999999999999999999988
Q ss_pred ---------------CCC------------CCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCc
Q psy9957 206 ---------------GAD------------LNFQDYDGWTPLHAAAHWAQREACQILVENFCDMDV 244 (251)
Q Consensus 206 ---------------~~~------------~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~ 244 (251)
+.+ ....+..++||++.|+..++.+.+..|++.+++...
T Consensus 252 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~~~~v~~ll~~~~~~~~ 317 (364)
T 3ljn_A 252 VRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKLDEVV 317 (364)
T ss_dssp HHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchhhhhccCHHHHHHHHHHHHHHHh
Confidence 221 223567889999999999988888888887765433
No 36
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=9.5e-36 Score=244.25 Aligned_cols=221 Identities=14% Similarity=-0.040 Sum_probs=171.5
Q ss_pred CCCccccCCCCCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCC--------------CC---ccHHHHHHhhCC
Q psy9957 26 NRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANV--------------DG---LTALHQVSKSAS 88 (251)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~--------------~g---~tpLh~a~~~~~ 88 (251)
.....+.|.+.+..+..|.|+++ |+.++|+.|+++|++++.... .+ .+.+|.++..+.
T Consensus 35 v~~ll~~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 109 (327)
T 1sw6_A 35 TSDFLSSPLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLL 109 (327)
T ss_dssp CCSTTTSSCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC-------------------------------CHHHHH
T ss_pred HHHHhhCCcccccCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhH
Confidence 34456778888888889999977 999999999999988654110 11 122344444444
Q ss_pred Cccccc-----------cccCCCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCC---cchhhhhhhc
Q psy9957 89 TLPLHS-----------LNCGPGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEE---SETNRQPSEM 154 (251)
Q Consensus 89 ~~~~~~-----------~~~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~---~~~~~~l~~~ 154 (251)
.++++. .+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+ .++++.|++.
T Consensus 110 ~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~ 189 (327)
T 1sw6_A 110 QEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDY 189 (327)
T ss_dssp HHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHH
T ss_pred HHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHh
Confidence 333322 36788999999999999999999999999999999999999999999998 7888888887
Q ss_pred C-CCCcccccCCCchHHHHHh----cCCHHHHHHHHHc--------------------CCCCcccCCCCCchhhhcC---
Q psy9957 155 G-NKPKKIKFSSGCVFLAACA----SSDKEEVLNLLKS--------------------GADINTANVDGLTALHQAG--- 206 (251)
Q Consensus 155 ~-~~~~~~~~~~~~~l~~a~~----~~~~~~~~~Ll~~--------------------~~~~~~~~~~g~t~l~~a~--- 206 (251)
+ .++...+..+.++||+|+. .++.++++.|++. |++++.++..|.||||+|.
T Consensus 190 ~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~ 269 (327)
T 1sw6_A 190 LYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLK 269 (327)
T ss_dssp HGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHH
T ss_pred hhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHH
Confidence 6 6688888999999999999 8999999999876 8999999999999999883
Q ss_pred ----CCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCcccccCCC
Q psy9957 207 ----ADLNFQDYDGWTPLHAAAHWAQREACQILVENFCDMDVKNYVVST 251 (251)
Q Consensus 207 ----~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~d~~g~t 251 (251)
.+++.+|..|+||||+|+..|+.+++++|+++|+|++.+|..|+|
T Consensus 270 ~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~T 318 (327)
T 1sw6_A 270 WIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLR 318 (327)
T ss_dssp HHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred HHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCC
Confidence 279999999999999999999999999999999999999999987
No 37
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.4e-34 Score=232.93 Aligned_cols=211 Identities=18% Similarity=0.146 Sum_probs=171.9
Q ss_pred ccchhHHHHHHHHHHHHHhhccCCCccccCCCCCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHH
Q psy9957 4 TRSSSALFKRAEQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQV 83 (251)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a 83 (251)
+...++..+..+-++.++.. +.+++..+..|.||||+|+..|+.++|++|+++|++++..+..|+||||+|
T Consensus 62 ~L~~Aa~~g~~~~v~~Ll~~---------g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A 132 (285)
T 3d9h_A 62 PMHEAAIHGHQLSLRNLISQ---------GWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNA 132 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHT---------TCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHC---------CCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 34456777777777777643 456778889999999999999999999999999999999999999999999
Q ss_pred HhhCCCcccccc---------ccCCCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhc
Q psy9957 84 SKSASTLPLHSL---------NCGPGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEM 154 (251)
Q Consensus 84 ~~~~~~~~~~~~---------~~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~ 154 (251)
+..|+.++++.+ +..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|++.
T Consensus 133 ~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ 212 (285)
T 3d9h_A 133 CVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLES 212 (285)
T ss_dssp HHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHC
Confidence 999998888776 45578899999999999999999999999998888999999999999999999999998
Q ss_pred CCCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCCCCCchhhhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHH
Q psy9957 155 GNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQAGADLNFQDYDGWTPLHAAAHWAQREACQI 234 (251)
Q Consensus 155 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~g~t~l~~A~~~~~~~i~~~ 234 (251)
|++++. +..+.++++.|+..++.+++++|+++|++++.+|..|.||||+ |+ ++.+++++
T Consensus 213 ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~------------------A~--~~~~~~~~ 271 (285)
T 3d9h_A 213 GADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVEL------------------VP--PESPLAQL 271 (285)
T ss_dssp TCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGG------------------SC--TTSHHHHH
T ss_pred CCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHH------------------hc--CccHHHHH
Confidence 888774 6778889999999999999999998887776666555555554 44 34589999
Q ss_pred HHhC-CCCCCc
Q psy9957 235 LVEN-FCDMDV 244 (251)
Q Consensus 235 Ll~~-ga~~~~ 244 (251)
|+++ |+++..
T Consensus 272 Ll~~~~a~l~~ 282 (285)
T 3d9h_A 272 FLEREGASLPK 282 (285)
T ss_dssp HHHHC------
T ss_pred HHHhhccCCCC
Confidence 9998 877654
No 38
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=6.2e-34 Score=222.75 Aligned_cols=207 Identities=17% Similarity=0.158 Sum_probs=148.2
Q ss_pred ccchhHHHHHHHHHHHHHhhccCCCccccCCCCCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHH
Q psy9957 4 TRSSSALFKRAEQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQV 83 (251)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a 83 (251)
+...++..+..+-++.++.. +.+++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|
T Consensus 14 ~L~~A~~~g~~~~v~~Ll~~---------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 84 (237)
T 3b7b_A 14 PLHAAAEAGHVDICHMLVQA---------GANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLA 84 (237)
T ss_dssp HHHHHHHHTCHHHHHHHHHT---------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHH
T ss_pred HHHHHHHcCcHHHHHHHHHc---------CCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Confidence 45567777777777766543 556677788999999999999999999999999999999999999999996
Q ss_pred HhhCCCcccccc-----------ccCCCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhh
Q psy9957 84 SKSASTLPLHSL-----------NCGPGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPS 152 (251)
Q Consensus 84 ~~~~~~~~~~~~-----------~~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~ 152 (251)
+..|+.++++++ +..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..|+.+++++|+
T Consensus 85 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll 164 (237)
T 3b7b_A 85 AKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILL 164 (237)
T ss_dssp HHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHH
T ss_pred HHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 666666555554 234556666666666666666666666666666666666666666666666666666
Q ss_pred hcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCCCCCchhhhcCCCCCCCCCCCCcHHHHHHHhCcHHHH
Q psy9957 153 EMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQAGADLNFQDYDGWTPLHAAAHWAQREAC 232 (251)
Q Consensus 153 ~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~g~t~l~~A~~~~~~~i~ 232 (251)
+.|.++...+..+.++++.|+..++.+++++|+++| ++++.+|..|.||||+|+..++.+.+
T Consensus 165 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g------------------ad~~~~d~~g~t~l~~A~~~~~~~~~ 226 (237)
T 3b7b_A 165 AAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRD------------------SDVTLKNKEGETPLQCASLNSQVWSA 226 (237)
T ss_dssp TTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTT------------------CCTTCCCTTSCCHHHHSCTTCHHHHH
T ss_pred HcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcC------------------CCCCccCCCCCCHHHHHHHHHHHHHH
Confidence 666666666666666666666666666666666655 45556677788888888888887655
Q ss_pred HHHHh
Q psy9957 233 QILVE 237 (251)
Q Consensus 233 ~~Ll~ 237 (251)
..|++
T Consensus 227 ~~l~~ 231 (237)
T 3b7b_A 227 LQMSK 231 (237)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
No 39
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=6.6e-35 Score=231.08 Aligned_cols=190 Identities=15% Similarity=0.077 Sum_probs=169.1
Q ss_pred CChHHHHHHhcCCHH----HHHHHHHcCCCCcc----cCCCCccHHHHHHhh---CCCcccccc-------c--------
Q psy9957 43 SGCVFLAACASSDKE----EVLNLLKSGADINT----ANVDGLTALHQVSKS---ASTLPLHSL-------N-------- 96 (251)
Q Consensus 43 ~~t~L~~A~~~~~~~----~v~~Ll~~g~~~~~----~~~~g~tpLh~a~~~---~~~~~~~~~-------~-------- 96 (251)
|.||||.|+..|+.+ ++++|+++|++++. .|..|+||||+|+.. |+.++++.+ +
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 81 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNA 81 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGC
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccc
Confidence 789999999999997 55667779999998 899999999999999 999999887 1
Q ss_pred ------cCCCchhhHHHhcCCHHHHHHHHHcCCCCccCCCC-------------CCcHHHHHHHhCCcchhhhhhh---c
Q psy9957 97 ------CGPGCVFLAACASSDKEEVLNLLKSGADINTANVD-------------GLTALHQLKRWEESETNRQPSE---M 154 (251)
Q Consensus 97 ------~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~-------------g~t~l~~A~~~~~~~~~~~l~~---~ 154 (251)
..|.||||+|+..|+.+++++|++.|++++.++.. |.||||+|+..|+.+++++|++ .
T Consensus 82 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ 161 (256)
T 2etb_A 82 QCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQ 161 (256)
T ss_dssp CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSC
T ss_pred ccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence 45999999999999999999999999999999886 9999999999999999999999 9
Q ss_pred CCCCcccccCCCchHHHHHh--cCCHH-------HHHHHHHcCCCCcccCCCCCchhhhcCCCCCCCCCCCCcHHHHHHH
Q psy9957 155 GNKPKKIKFSSGCVFLAACA--SSDKE-------EVLNLLKSGADINTANVDGLTALHQAGADLNFQDYDGWTPLHAAAH 225 (251)
Q Consensus 155 ~~~~~~~~~~~~~~l~~a~~--~~~~~-------~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~g~t~l~~A~~ 225 (251)
|++++..+..+.+++|+|+. .+..+ ++++|+++|++++... ..++.+|..|.||||+|+.
T Consensus 162 ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~-----------~~~~~~d~~g~tpL~~A~~ 230 (256)
T 2etb_A 162 PASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTV-----------QLEEISNHQGLTPLKLAAK 230 (256)
T ss_dssp CCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTC-----------CGGGCCCTTSCCHHHHHHH
T ss_pred CCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCccccc-----------ccccccCCCCCCHHHHHHH
Confidence 99999999999999999998 77888 9999999987764211 0125677889999999999
Q ss_pred hCcHHHHHHHHhCCCCCC
Q psy9957 226 WAQREACQILVENFCDMD 243 (251)
Q Consensus 226 ~~~~~i~~~Ll~~ga~~~ 243 (251)
.|+.+++++|+++|++..
T Consensus 231 ~g~~~~v~~Ll~~g~~~~ 248 (256)
T 2etb_A 231 EGKIEIFRHILQREFSGA 248 (256)
T ss_dssp TTCHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHhCCCCCC
Confidence 999999999999987643
No 40
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=4.4e-34 Score=221.58 Aligned_cols=175 Identities=23% Similarity=0.274 Sum_probs=132.5
Q ss_pred CCHHHHHHHHHcCCCCccc-CCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCC
Q psy9957 54 SDKEEVLNLLKSGADINTA-NVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLKSGADINTANVDG 132 (251)
Q Consensus 54 ~~~~~v~~Ll~~g~~~~~~-~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g 132 (251)
|+.+++++|+++|++++.. |..|+||||+ |+..|+.+++++|++.|++++.++..|
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~-----------------------A~~~g~~~~v~~Ll~~g~~~~~~~~~g 58 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRTGETALHL-----------------------AARYSRSDAAKRLLEASADANIQDNMG 58 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTTCCCHHHH-----------------------HHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred CcHHHHHHHHHcCCCcccccCCCCCchHHH-----------------------HHHcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 6778899999999998876 7899999999 666666666666666666666666666
Q ss_pred CcHHHHHHHhCCcchhhhhhhcCC-CCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCCCCCchhhhc------
Q psy9957 133 LTALHQLKRWEESETNRQPSEMGN-KPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQA------ 205 (251)
Q Consensus 133 ~t~l~~A~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a------ 205 (251)
.||||+|+..++.+++++|++.+. ++...+..+.++++.|+..++.++++.|+++|++++..+..|.||||+|
T Consensus 59 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 138 (223)
T 2f8y_A 59 RTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNV 138 (223)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCH
Confidence 666666666666666666666654 4555555666666666666666666666666666666666666666665
Q ss_pred ---------CCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCcccccCCC
Q psy9957 206 ---------GADLNFQDYDGWTPLHAAAHWAQREACQILVENFCDMDVKNYVVST 251 (251)
Q Consensus 206 ---------~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~d~~g~t 251 (251)
+++++.+|..|.||||+|+..++.+++++|+++|++++.+|..|.|
T Consensus 139 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t 193 (223)
T 2f8y_A 139 DAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRL 193 (223)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCC
T ss_pred HHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCC
Confidence 6777788889999999999999999999999999999999999986
No 41
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=7.2e-34 Score=227.67 Aligned_cols=197 Identities=18% Similarity=0.114 Sum_probs=156.2
Q ss_pred ccchhHHHHHHHHHHHHHhhccCCCccccCCCCCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHH
Q psy9957 4 TRSSSALFKRAEQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQV 83 (251)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a 83 (251)
+...++..+..+-++.++..... ...++..+..|.||||+|+..|+.++|++|+++|++++..+..|+||||+|
T Consensus 12 ~L~~A~~~g~~~~v~~Ll~~g~~------~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A 85 (282)
T 1oy3_D 12 ALHLAVIHQHEPFLDFLLGFSAG------HEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLA 85 (282)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHTT------SGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhcCCC------cccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 45567777777777777644221 112456778899999999999999999999999999999999999999999
Q ss_pred HhhCCCcccccc---------------------------------------------------------ccCCCchhhHH
Q psy9957 84 SKSASTLPLHSL---------------------------------------------------------NCGPGCVFLAA 106 (251)
Q Consensus 84 ~~~~~~~~~~~~---------------------------------------------------------~~~~~t~l~~a 106 (251)
++.|+.++++.+ +..|.||||+|
T Consensus 86 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A 165 (282)
T 1oy3_D 86 CRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVA 165 (282)
T ss_dssp TTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHH
T ss_pred HHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHH
Confidence 999998777655 23577889999
Q ss_pred HhcCCHHHHHHHHHcCCCCccCCCC-CCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHH
Q psy9957 107 CASSDKEEVLNLLKSGADINTANVD-GLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLL 185 (251)
Q Consensus 107 ~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll 185 (251)
+..|+.+++++|++.|++++.++.. |.||||+|+..|+.+++++|++.|++++.++..+.+++++|+..++.+++++|+
T Consensus 166 ~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll 245 (282)
T 1oy3_D 166 VIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLR 245 (282)
T ss_dssp HHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHH
Confidence 9999999999999999888888754 889999999999999999999888888888888889999999999999999999
Q ss_pred HcCCCCcccCCCCCchhhhcC
Q psy9957 186 KSGADINTANVDGLTALHQAG 206 (251)
Q Consensus 186 ~~~~~~~~~~~~g~t~l~~a~ 206 (251)
++|++++.++..|.||+++|.
T Consensus 246 ~~ga~~~~~~~~g~tpl~~a~ 266 (282)
T 1oy3_D 246 AHGAPEPEDGGDKLSPCSSSG 266 (282)
T ss_dssp HTTCCCCCCC-----------
T ss_pred HcCCCcCcCCCcccccccccC
Confidence 888888888888888877764
No 42
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=2.6e-34 Score=228.13 Aligned_cols=192 Identities=16% Similarity=0.090 Sum_probs=166.5
Q ss_pred cCCChHHHHHHhcCCHHHHHHHHH----cCCCCcccC----CCCccHHHHHH---hhCCCccccccc-------------
Q psy9957 41 FSSGCVFLAACASSDKEEVLNLLK----SGADINTAN----VDGLTALHQVS---KSASTLPLHSLN------------- 96 (251)
Q Consensus 41 ~~~~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~~----~~g~tpLh~a~---~~~~~~~~~~~~------------- 96 (251)
.-+.|+||.||+.|+.+.++.|++ +|++++..+ ..|+||||+|+ +.|+.++++.+.
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~ 82 (260)
T 3jxi_A 3 VFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFI 82 (260)
T ss_dssp CCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHH
T ss_pred cchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhh
Confidence 457899999999999996555555 899998776 67999999999 779999888871
Q ss_pred --------cCCCchhhHHHhcCCHHHHHHHHHcCCCCccCC--------------CCCCcHHHHHHHhCCcchhhhhhh-
Q psy9957 97 --------CGPGCVFLAACASSDKEEVLNLLKSGADINTAN--------------VDGLTALHQLKRWEESETNRQPSE- 153 (251)
Q Consensus 97 --------~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~--------------~~g~t~l~~A~~~~~~~~~~~l~~- 153 (251)
..|.||||+|+..|+.+++++|++.|++++.++ ..|.||||+|+..|+.+++++|++
T Consensus 83 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~ 162 (260)
T 3jxi_A 83 NSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTEN 162 (260)
T ss_dssp TCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHC
T ss_pred cccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 278899999999999999999999999999988 689999999999999999999999
Q ss_pred --cCCCCcccccCCCchHHHHHhcCC---------HHHHHHHHHcCCCCcccCCCCCchhhhcCCCCCCCCCCCCcHHHH
Q psy9957 154 --MGNKPKKIKFSSGCVFLAACASSD---------KEEVLNLLKSGADINTANVDGLTALHQAGADLNFQDYDGWTPLHA 222 (251)
Q Consensus 154 --~~~~~~~~~~~~~~~l~~a~~~~~---------~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~g~t~l~~ 222 (251)
.|++++..+..+.+++|+|+..++ .+++++|+++|++++... ..++.+|..|.||||+
T Consensus 163 ~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~-----------~~~~~~d~~g~tpL~~ 231 (260)
T 3jxi_A 163 GHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDT-----------NLEALLNNDGLSPLMM 231 (260)
T ss_dssp SSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTC-----------CGGGCCCTTSCCHHHH
T ss_pred cccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCccccccc-----------chhhcccCCCCCHHHH
Confidence 899999999999999999998777 688899999987775321 1135678899999999
Q ss_pred HHHhCcHHHHHHHHhCCCCCC
Q psy9957 223 AAHWAQREACQILVENFCDMD 243 (251)
Q Consensus 223 A~~~~~~~i~~~Ll~~ga~~~ 243 (251)
|+..|+.+++++|+++|+++.
T Consensus 232 A~~~g~~~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 232 AAKTGKIGIFQHIIRREIADA 252 (260)
T ss_dssp HHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHhCCCcc
Confidence 999999999999999987643
No 43
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=9.4e-33 Score=214.70 Aligned_cols=194 Identities=13% Similarity=0.060 Sum_probs=159.7
Q ss_pred ccchhHHHHHHHHHHHHHhhccCCCccccCCCCCccccCCChHHHHHHhcCCHHHHHHHHHcC--CCCcc-cCCCCccHH
Q psy9957 4 TRSSSALFKRAEQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSG--ADINT-ANVDGLTAL 80 (251)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~-~~~~g~tpL 80 (251)
|...++..++.+.++.++..... .....+..|.||||+|+..|+.+++++|+++| ++++. .+..|+|||
T Consensus 5 ~L~~A~~~g~~~~v~~Ll~~~~~--------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L 76 (228)
T 2dzn_A 5 PLHQACMENEFFKVQELLHSKPS--------LLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPF 76 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHHCGG--------GTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHH
T ss_pred HHHHHHHhCCHHHHHHHHhcCcc--------ccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHH
Confidence 45567778888888888755321 12336778999999999999999999999999 55555 778999999
Q ss_pred HHHHhhCCCcccccc------------ccCCCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchh
Q psy9957 81 HQVSKSASTLPLHSL------------NCGPGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETN 148 (251)
Q Consensus 81 h~a~~~~~~~~~~~~------------~~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~ 148 (251)
|+|+..|+.++++.+ +..|.||||.|+..++.+++++|++.|++++.++..|.||||+|+..|+.+++
T Consensus 77 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 156 (228)
T 2dzn_A 77 HIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLI 156 (228)
T ss_dssp HHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHH
Confidence 999999888877665 34577889999988999999999988988888888899999999988889999
Q ss_pred hhhhhcC-CCCcccccCCCchHHHHHhcCCHHHHHHHH-HcCCCCcccCCCCCchhhhc
Q psy9957 149 RQPSEMG-NKPKKIKFSSGCVFLAACASSDKEEVLNLL-KSGADINTANVDGLTALHQA 205 (251)
Q Consensus 149 ~~l~~~~-~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll-~~~~~~~~~~~~g~t~l~~a 205 (251)
++|++.| .+++..+..+.++++.|+..++.+++++|+ ++|++++.+|..|.||+++|
T Consensus 157 ~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A 215 (228)
T 2dzn_A 157 ELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVA 215 (228)
T ss_dssp HHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGC
T ss_pred HHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHH
Confidence 9998888 788888888888999999999889888888 77887777777666666665
No 44
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=1.3e-32 Score=203.08 Aligned_cols=159 Identities=21% Similarity=0.182 Sum_probs=148.4
Q ss_pred CCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHHHHHHHHHc
Q psy9957 42 SSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLKS 121 (251)
Q Consensus 42 ~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~ 121 (251)
...|||+.|+..|+.+++++|+++|++++..+..|+||||+ |+. ++.+++++|++.
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~-----------------------A~~-~~~~~v~~Ll~~ 59 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQV-----------------------MKL-GNPEIARRLLLR 59 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHH-----------------------CCS-SCHHHHHHHHHT
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHH-----------------------HHc-CcHHHHHHHHHc
Confidence 46789999999999999999999999999999999999999 888 999999999999
Q ss_pred CCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCCCCCch
Q psy9957 122 GADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTA 201 (251)
Q Consensus 122 g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~ 201 (251)
|++++.++..|.||||+|+..++.+++++|++.|.+++..+..+.+++|.|+..++.+++++|+++|++.
T Consensus 60 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---------- 129 (162)
T 1ihb_A 60 GANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASN---------- 129 (162)
T ss_dssp TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCC----------
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCC----------
Confidence 9999999999999999999999999999999999999999999999999999999999999999997653
Q ss_pred hhhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCCC
Q psy9957 202 LHQAGADLNFQDYDGWTPLHAAAHWAQREACQILVENFCD 241 (251)
Q Consensus 202 l~~a~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~ 241 (251)
++.++..|.||||+|+..++.+++++|+++|||
T Consensus 130 -------~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 130 -------VGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp -------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred -------CCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 356677899999999999999999999999986
No 45
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.4e-32 Score=214.91 Aligned_cols=183 Identities=17% Similarity=0.131 Sum_probs=171.2
Q ss_pred CcccCCCCccHHHHHHhhCCCcccccc----------ccCCCchhhHHHhcCCHHHHHHHHHcCCCCccCC-CCCCcHHH
Q psy9957 69 INTANVDGLTALHQVSKSASTLPLHSL----------NCGPGCVFLAACASSDKEEVLNLLKSGADINTAN-VDGLTALH 137 (251)
Q Consensus 69 ~~~~~~~g~tpLh~a~~~~~~~~~~~~----------~~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~l~ 137 (251)
++..|..|.+|||+|++.|+.++++.+ +..|.||||.|+..|+.+++++|++.|.+++..+ ..|.||||
T Consensus 2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~ 81 (240)
T 3eu9_A 2 MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLH 81 (240)
T ss_dssp CCCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHH
T ss_pred ccccccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhH
Confidence 456788899999999999999988877 5778899999999999999999999999988655 45999999
Q ss_pred HHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCCCCCchhhhc------------
Q psy9957 138 QLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQA------------ 205 (251)
Q Consensus 138 ~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a------------ 205 (251)
+|+..++.+++++|++.|.++...+..+.++++.|+..++.+++++|+++|++++..+..|.||||+|
T Consensus 82 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~ 161 (240)
T 3eu9_A 82 WATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRL 161 (240)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred ----CCCCCCCCC-CCCcHHHHHHHhCcHHHHHHHHhCCCCCCcccccCCC
Q psy9957 206 ----GADLNFQDY-DGWTPLHAAAHWAQREACQILVENFCDMDVKNYVVST 251 (251)
Q Consensus 206 ----~~~~~~~~~-~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~d~~g~t 251 (251)
+.+++..+. .|.||||+|+..++.+++++|+++|++++.+|..|+|
T Consensus 162 L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 212 (240)
T 3eu9_A 162 LLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGES 212 (240)
T ss_dssp HHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCB
T ss_pred HHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC
Confidence 788888886 9999999999999999999999999999999999986
No 46
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=1.1e-32 Score=205.49 Aligned_cols=168 Identities=21% Similarity=0.231 Sum_probs=151.4
Q ss_pred CChHHHHHHhcCCHHHHHHHHHcCCC-CcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHHHHHHHHHc
Q psy9957 43 SGCVFLAACASSDKEEVLNLLKSGAD-INTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLKS 121 (251)
Q Consensus 43 ~~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~ 121 (251)
+.||||.|+..|+.++++.|++.+.. ++..+..|+||||+ |+..|+.+++++|++.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-----------------------A~~~~~~~~v~~Ll~~ 58 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIW-----------------------ASAFGEIETVRFLLEW 58 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHH-----------------------HHHTTCHHHHHHHHHH
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHH-----------------------HHHcCCHHHHHHHHHc
Confidence 46789999999999999999999877 88889999999999 9999999999999999
Q ss_pred CCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCCCCCch
Q psy9957 122 GADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTA 201 (251)
Q Consensus 122 g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~ 201 (251)
|++++.++..|.||||+|+..++.+++++|++.|.++...+..+.+++|.|+..++.+++++|+++|++++
T Consensus 59 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~--------- 129 (172)
T 3v30_A 59 GADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLT--------- 129 (172)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT---------
T ss_pred CCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc---------
Confidence 99999999999999999999999999999999999999999999999999999999999999999876554
Q ss_pred hhhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCcccccCCC
Q psy9957 202 LHQAGADLNFQDYDGWTPLHAAAHWAQREACQILVENFCDMDVKNYVVST 251 (251)
Q Consensus 202 l~~a~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~d~~g~t 251 (251)
.+|..|.||||+|+..++.+++++|+++|+++..++..|.|
T Consensus 130 ---------~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~~ 170 (172)
T 3v30_A 130 ---------TEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPAD 170 (172)
T ss_dssp ---------CCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC------
T ss_pred ---------ccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcccCCCCC
Confidence 45667899999999999999999999999999998888765
No 47
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=4.2e-32 Score=205.94 Aligned_cols=162 Identities=22% Similarity=0.244 Sum_probs=152.3
Q ss_pred CccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHHHHH
Q psy9957 37 KKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVL 116 (251)
Q Consensus 37 ~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~ 116 (251)
+..+..|.||||+|+..|+.+++++|+++|++++..+..|+||||+ |+..++.++++
T Consensus 29 n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~-----------------------A~~~~~~~~v~ 85 (192)
T 2rfm_A 29 NYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIW-----------------------AVKNNRLGIAE 85 (192)
T ss_dssp TCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHH-----------------------HHHTTCHHHHH
T ss_pred hCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHH-----------------------HHHcCCHHHHH
Confidence 4567789999999999999999999999999999999999999999 89999999999
Q ss_pred HHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCC
Q psy9957 117 NLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANV 196 (251)
Q Consensus 117 ~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 196 (251)
+|++.|++++.++..|.||||+|+..++.+++++|++.|+++...+..+.+++|.|+..++.+++++|+++|++++
T Consensus 86 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---- 161 (192)
T 2rfm_A 86 KLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADIS---- 161 (192)
T ss_dssp HHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT----
T ss_pred HHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999876654
Q ss_pred CCCchhhhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCC
Q psy9957 197 DGLTALHQAGADLNFQDYDGWTPLHAAAHWAQREACQILVENF 239 (251)
Q Consensus 197 ~g~t~l~~a~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~g 239 (251)
.+|..|.||||+|+..++.+++++|+++|
T Consensus 162 --------------~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 162 --------------ARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp --------------CBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred --------------CcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 45667899999999999999999999875
No 48
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.98 E-value=1.9e-31 Score=198.30 Aligned_cols=161 Identities=28% Similarity=0.288 Sum_probs=148.0
Q ss_pred ccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHHHHHH
Q psy9957 38 KIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLN 117 (251)
Q Consensus 38 ~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~ 117 (251)
.....+.++|+.|++.|+.++|++|+++|++++..+..|+||||+ |+..|+.+++++
T Consensus 9 ~~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~-----------------------A~~~~~~~~v~~ 65 (169)
T 2y1l_E 9 HHGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHL-----------------------AAFNGHLEIVEV 65 (169)
T ss_dssp ----CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH-----------------------HHHTTCHHHHHH
T ss_pred cCCCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHH-----------------------HHHcCCHHHHHH
Confidence 344567789999999999999999999999999999999999999 999999999999
Q ss_pred HHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCCC
Q psy9957 118 LLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVD 197 (251)
Q Consensus 118 Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~ 197 (251)
|++.|++++.++..|.||||+|+..++.+++++|++.|.++...+..+.++++.|+..++.+++++|+++|++++
T Consensus 66 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----- 140 (169)
T 2y1l_E 66 LLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN----- 140 (169)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-----
T ss_pred HHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-----
Confidence 999999999999999999999999999999999999999999999999999999999999999999999876554
Q ss_pred CCchhhhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCC
Q psy9957 198 GLTALHQAGADLNFQDYDGWTPLHAAAHWAQREACQILVENF 239 (251)
Q Consensus 198 g~t~l~~a~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~g 239 (251)
.+|..|.||||+|+..++.+++++|+++|
T Consensus 141 -------------~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 141 -------------AQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp -------------CCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred -------------CcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 45667899999999999999999999987
No 49
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.98 E-value=9.7e-32 Score=199.41 Aligned_cols=160 Identities=19% Similarity=0.201 Sum_probs=150.6
Q ss_pred CCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHHHHHHHHHc
Q psy9957 42 SSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLKS 121 (251)
Q Consensus 42 ~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~ 121 (251)
+|.||||.|+..|+.++++.|++.|++++..+..|+||||+ |+..|+.+++++|++.
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~-----------------------A~~~~~~~~v~~Ll~~ 58 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMW-----------------------AAAHGQIAVVEFLLQN 58 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHH-----------------------HHHTTCHHHHHHHHHT
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHH-----------------------HHHCCCHHHHHHHHHc
Confidence 57899999999999999999999999999999999999999 9999999999999999
Q ss_pred CCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCCCCCch
Q psy9957 122 GADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTA 201 (251)
Q Consensus 122 g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~ 201 (251)
|++++.++..|.||||+|+..++.+++++|++.|.++...+..+.+++|.|+..++.+++++|+++|++++
T Consensus 59 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--------- 129 (167)
T 3v31_A 59 GADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPT--------- 129 (167)
T ss_dssp TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT---------
T ss_pred CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---------
Confidence 99999999999999999999999999999999999999999999999999999999999999999876554
Q ss_pred hhhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCC
Q psy9957 202 LHQAGADLNFQDYDGWTPLHAAAHWAQREACQILVENFCDM 242 (251)
Q Consensus 202 l~~a~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~ 242 (251)
.+|..|.||||+|+..++.+++++|++++++.
T Consensus 130 ---------~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~ 161 (167)
T 3v31_A 130 ---------IETDSGYNSMDLAVALGYRSVQQVIESHLLKL 161 (167)
T ss_dssp ---------CCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred ---------CcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 45667899999999999999999999998654
No 50
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.98 E-value=4.9e-33 Score=223.93 Aligned_cols=208 Identities=15% Similarity=0.066 Sum_probs=178.6
Q ss_pred ccchhHHHHHHHHHHHHHhhccCCCccccCCCCCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHH
Q psy9957 4 TRSSSALFKRAEQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQV 83 (251)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a 83 (251)
+...++..+..+-++.++.. +.+++.. +|.||||+|+..|+.+++++|+++|++++..+..|+||||+|
T Consensus 34 ~L~~A~~~g~~~~v~~Ll~~---------g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A 102 (285)
T 3kea_A 34 ASYYAIADNNVRLVCTLLNA---------GALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYA 102 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHT---------TGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhC---------CCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHH
Confidence 44556677777777777644 2333333 489999999999999999999999999999999999999999
Q ss_pred HhhCCCcccccc----------ccCC-CchhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhh
Q psy9957 84 SKSASTLPLHSL----------NCGP-GCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPS 152 (251)
Q Consensus 84 ~~~~~~~~~~~~----------~~~~-~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~ 152 (251)
+..|+.++++++ +..| .||||+|+..|+.+++++|++.|+++... ..|.||||+|+..|+.+++++|+
T Consensus 103 ~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll 181 (285)
T 3kea_A 103 VDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLL 181 (285)
T ss_dssp HHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHH
Confidence 999999999887 4556 79999999999999999999999886322 28999999999999999999999
Q ss_pred hcCCCCcccccCCCch-HHHHHhcCCHHHHHHHHHcCCCCcccCCCCCchhhhcCCCCCCCCCCCCcHHHHHHHhCcHHH
Q psy9957 153 EMGNKPKKIKFSSGCV-FLAACASSDKEEVLNLLKSGADINTANVDGLTALHQAGADLNFQDYDGWTPLHAAAHWAQREA 231 (251)
Q Consensus 153 ~~~~~~~~~~~~~~~~-l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~g~t~l~~A~~~~~~~i 231 (251)
+.|++++..+..+.++ ++.|+..++.+++++|+++|++++..+. .|+..++.++
T Consensus 182 ~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~-------------------------~a~~~~~~~i 236 (285)
T 3kea_A 182 DYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL-------------------------ENVLLDDAEI 236 (285)
T ss_dssp HHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-------------------------GGGTTTCHHH
T ss_pred HcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-------------------------hhhhcCCHHH
Confidence 9999999999999997 9999999999999999999988876651 3455889999
Q ss_pred HHHHHhCCCCCCccccc
Q psy9957 232 CQILVENFCDMDVKNYV 248 (251)
Q Consensus 232 ~~~Ll~~ga~~~~~d~~ 248 (251)
+++|+++|++++.....
T Consensus 237 v~~Ll~~g~~~~~~~~~ 253 (285)
T 3kea_A 237 AKMIIEKHVEYKSDSYT 253 (285)
T ss_dssp HHHHHHHHHHHTTCTTT
T ss_pred HHHHHHcCCCCCCcccc
Confidence 99999999988765543
No 51
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.98 E-value=6.8e-32 Score=218.21 Aligned_cols=201 Identities=22% Similarity=0.223 Sum_probs=132.9
Q ss_pred cchhHHHHHHHHHHHHHhhccCCCccccCCCCCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHHH
Q psy9957 5 RSSSALFKRAEQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVS 84 (251)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~ 84 (251)
...++..++.+.++.++.. +.+++..+..|.||||+||..|+.++|++|+++|++++..+..|+||||+
T Consensus 44 l~~A~~~g~~~~v~~Ll~~---------g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~-- 112 (299)
T 1s70_B 44 FLAACSSGDTEEVLRLLER---------GADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHA-- 112 (299)
T ss_dssp HHHHHHHTCHHHHHHHHHH---------CCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH--
T ss_pred HHHHHHcCCHHHHHHHHHc---------CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHH--
Confidence 4567788888888888754 55677788899999999999999999999999999999999999999999
Q ss_pred hhCCCccccccccCCCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhh-cCCCC-----
Q psy9957 85 KSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSE-MGNKP----- 158 (251)
Q Consensus 85 ~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~-~~~~~----- 158 (251)
|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++++. .+.+.
T Consensus 113 ---------------------A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~ 171 (299)
T 1s70_B 113 ---------------------AASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARK 171 (299)
T ss_dssp ---------------------HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHH
T ss_pred ---------------------HHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhh
Confidence 555555555555555555555555555555555555555555554432 11111
Q ss_pred ---------------------cccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCCCCCchhhhc------------
Q psy9957 159 ---------------------KKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQA------------ 205 (251)
Q Consensus 159 ---------------------~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a------------ 205 (251)
......+.+++|.|+..++.+++++|+++|++++.+|..|.||||+|
T Consensus 172 ~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~L 251 (299)
T 1s70_B 172 EEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRIL 251 (299)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred hhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHH
Confidence 11223455555555555555555555555555555555555555555
Q ss_pred ---CCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhC
Q psy9957 206 ---GADLNFQDYDGWTPLHAAAHWAQREACQILVEN 238 (251)
Q Consensus 206 ---~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ 238 (251)
|++++.+|..|+||||+|++. ..++++.|++.
T Consensus 252 l~~gad~~~~d~~g~t~l~~A~~~-~~~~l~~l~~~ 286 (299)
T 1s70_B 252 VENLCDMEAVNKVGQTAFDVADED-ILGYLEELQKK 286 (299)
T ss_dssp HHTTCCTTCCCTTSCCTTTSCCSG-GGHHHHHHHHH
T ss_pred HHcCCCCCCcCCCCCCHHHHHHHH-HHHHHHHHHHH
Confidence 556666666677777776543 34444444443
No 52
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.98 E-value=1.8e-31 Score=198.32 Aligned_cols=159 Identities=25% Similarity=0.254 Sum_probs=145.5
Q ss_pred cccchhHHHHHHHHHHHHHhhccCCCccccCCCCCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHH
Q psy9957 3 ETRSSSALFKRAEQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQ 82 (251)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~ 82 (251)
+.+..++..++.+.++.++. .|.+++.++..|.||||+|+..++.+++++|+++|++++.+|..|+||||+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~---------~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~ 76 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIE---------NGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHH 76 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHH---------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHH---------CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHH
Confidence 45677889999999998874 367888899999999999999999999999999999999999999999999
Q ss_pred HHhhCCCccccccccCCCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccc
Q psy9957 83 VSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIK 162 (251)
Q Consensus 83 a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~ 162 (251)
|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|++.|+++...+
T Consensus 77 -----------------------A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d 133 (169)
T 4gpm_A 77 -----------------------AAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSD 133 (169)
T ss_dssp -----------------------HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred -----------------------HHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccC
Confidence 899999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhcCCHHHHHHHHHcCCCCcc
Q psy9957 163 FSSGCVFLAACASSDKEEVLNLLKSGADINT 193 (251)
Q Consensus 163 ~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~ 193 (251)
..+.+|+++|+..++.+++++|+++|++++.
T Consensus 134 ~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 134 SDGRTPLDLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence 9999999999999999999999999999875
No 53
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=3.1e-31 Score=198.96 Aligned_cols=167 Identities=17% Similarity=0.164 Sum_probs=152.3
Q ss_pred CCChHHHHHHhcCCHHHHHHHHHc-CCCCcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHHHHHHHHH
Q psy9957 42 SSGCVFLAACASSDKEEVLNLLKS-GADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLK 120 (251)
Q Consensus 42 ~~~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~ 120 (251)
++.++|+.||..|+.++|+.|++. +.+++..+..|+||||+ |+..++.+++++|++
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-----------------------A~~~~~~~~v~~Ll~ 60 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHW-----------------------ACREGRSAVVEMLIM 60 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHH-----------------------HHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHH-----------------------HHHcCcHHHHHHHHH
Confidence 466789999999999999999998 77899999999999999 999999999999999
Q ss_pred cCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCCCCCc
Q psy9957 121 SGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLT 200 (251)
Q Consensus 121 ~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t 200 (251)
.|++++.++..|.||||+|+..++.+++++|++.|++++..+..+.+++|.|+..++.+++++|+++|++++.+
T Consensus 61 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~------ 134 (179)
T 3f6q_A 61 RGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSIC------ 134 (179)
T ss_dssp TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBC------
T ss_pred cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchh------
Confidence 99999999999999999999999999999999999999999999999999999999999999999998776554
Q ss_pred hhhhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCcccccC
Q psy9957 201 ALHQAGADLNFQDYDGWTPLHAAAHWAQREACQILVENFCDMDVKNYVV 249 (251)
Q Consensus 201 ~l~~a~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~d~~g 249 (251)
|..|.|||++|+..++.+++++|+++|++++..+.++
T Consensus 135 ------------~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~~~~~~ 171 (179)
T 3f6q_A 135 ------------NKYGEMPVDKAKAPLRELLRERAEKMGQNLNRIPYKD 171 (179)
T ss_dssp ------------CTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSCBCCCC
T ss_pred ------------ccCCCCcHHHHHHHHHHHHHHHHHHhhcCcccCCccc
Confidence 4566777777888999999999999999999888765
No 54
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.97 E-value=7.2e-34 Score=221.65 Aligned_cols=175 Identities=19% Similarity=0.168 Sum_probs=162.0
Q ss_pred ccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHHHHHH
Q psy9957 38 KIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLN 117 (251)
Q Consensus 38 ~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~ 117 (251)
..+..+.||||.|+..|+.++|++|+++|++++..|..|+||||+ |+..|+.+++++
T Consensus 16 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~-----------------------A~~~g~~~~v~~ 72 (229)
T 2vge_A 16 RARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHN-----------------------AICGANYSIVDF 72 (229)
T ss_dssp CTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHH-----------------------HHHTTCHHHHHH
T ss_pred ccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHH-----------------------HHHcCCHHHHHH
Confidence 455667789999999999999999999999999999999999999 999999999999
Q ss_pred HHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccc-cCCCchHHHH--HhcCCHHHHHHHHHcCCCCccc
Q psy9957 118 LLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIK-FSSGCVFLAA--CASSDKEEVLNLLKSGADINTA 194 (251)
Q Consensus 118 Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~l~~a--~~~~~~~~~~~Ll~~~~~~~~~ 194 (251)
|++.|++++.+|..|.||||+|+..|+.+++++|++.|+++...+ ..+.++++.| +..++.+++++|+++|++++..
T Consensus 73 Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~ 152 (229)
T 2vge_A 73 LITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLM 152 (229)
T ss_dssp HHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTS
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccc
Confidence 999999999999999999999999999999999999999999886 5899999999 9999999999999999999999
Q ss_pred CCCCCchhhhc------------CCC--CCCCCCCCCcHHHHHHHhCcHHHHHHH
Q psy9957 195 NVDGLTALHQA------------GAD--LNFQDYDGWTPLHAAAHWAQREACQIL 235 (251)
Q Consensus 195 ~~~g~t~l~~a------------~~~--~~~~~~~g~t~l~~A~~~~~~~i~~~L 235 (251)
+..|.||++.+ +.+ ++.+|..|+||||+|+..|+.++|+.+
T Consensus 153 ~~~~~~~l~~~~~~~~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~ 207 (229)
T 2vge_A 153 NSGAVYALWDYSAEFGDELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRN 207 (229)
T ss_dssp GGGEEEESSCBCCSSTTBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEGG
T ss_pred cCCchHHHHHHhhccccccCccccccccccccCCCcccHHHHHHHcCCcceeehh
Confidence 99999999854 444 677899999999999999999888653
No 55
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=7.8e-31 Score=215.02 Aligned_cols=167 Identities=14% Similarity=0.046 Sum_probs=140.3
Q ss_pred ccCCCCCc-cccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHHHhhCC---Ccccccc-----------
Q psy9957 31 EMGNKPKK-IKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSAS---TLPLHSL----------- 95 (251)
Q Consensus 31 ~~~~~~~~-~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~~~~~---~~~~~~~----------- 95 (251)
+.+.+++. .+..|.||||+||..|+.++|++|+++|++++.+|..|+||||+|+..|+ .+++..+
T Consensus 118 ~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~ 197 (327)
T 1sw6_A 118 NTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILE 197 (327)
T ss_dssp TSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEE
T ss_pred hcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCC
Confidence 45677887 89999999999999999999999999999999999999999999999988 4444333
Q ss_pred ccCCCchhhHHHh----cCCHHHHHHHHHc--------------------CCCCccCCCCCCcHHHHHHHhCCcchhhhh
Q psy9957 96 NCGPGCVFLAACA----SSDKEEVLNLLKS--------------------GADINTANVDGLTALHQLKRWEESETNRQP 151 (251)
Q Consensus 96 ~~~~~t~l~~a~~----~~~~~~v~~Ll~~--------------------g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l 151 (251)
+..|.||||+|+. .|+.+++++|++. |++++.++..|.||||.|+. +++|
T Consensus 198 d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~L 271 (327)
T 1sw6_A 198 DSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWI 271 (327)
T ss_dssp CTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHH
T ss_pred CCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHH
Confidence 7889999999999 8999999999987 89999999999999999985 8889
Q ss_pred hhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCCCCCchhhhc
Q psy9957 152 SEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQA 205 (251)
Q Consensus 152 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a 205 (251)
++. +++.++..+.++||+|+..++.+++++|+++|++++.+|..|.||||+|
T Consensus 272 l~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A 323 (327)
T 1sw6_A 272 IAN--MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFG 323 (327)
T ss_dssp HHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGT
T ss_pred HHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 888 4667788999999999999999999999999999999999999999887
No 56
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=3.3e-31 Score=207.34 Aligned_cols=172 Identities=15% Similarity=0.100 Sum_probs=159.6
Q ss_pred CCCCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHHHhhCCCcccccc----------------cc
Q psy9957 34 NKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSL----------------NC 97 (251)
Q Consensus 34 ~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~----------------~~ 97 (251)
.+++..+..|.||||+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.++++.+ +.
T Consensus 36 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~ 115 (236)
T 1ikn_D 36 AFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNY 115 (236)
T ss_dssp CCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCT
T ss_pred HHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCC
Confidence 36778888999999999999999999999999999999999999999999999998887665 34
Q ss_pred CCCchhhHHHhcCCHHHHHHHHHcCCCCccCCC-CCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcC
Q psy9957 98 GPGCVFLAACASSDKEEVLNLLKSGADINTANV-DGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASS 176 (251)
Q Consensus 98 ~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~ 176 (251)
.|.||||+|+..|+.+++++|++.|++++.++. .|.||||+|+..|+.+++++|++.|+++...+..+.+++++|+..+
T Consensus 116 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~ 195 (236)
T 1ikn_D 116 NGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRP 195 (236)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSS
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccC
Confidence 688999999999999999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCc--ccCCCCCchhhhc
Q psy9957 177 DKEEVLNLLKSGADIN--TANVDGLTALHQA 205 (251)
Q Consensus 177 ~~~~~~~Ll~~~~~~~--~~~~~g~t~l~~a 205 (251)
+.+++++|+++|++.. .++..|.||...+
T Consensus 196 ~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~ 226 (236)
T 1ikn_D 196 STRIQQQLGQLTLENLQMLPESEDEESYDTE 226 (236)
T ss_dssp CHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC
T ss_pred chHHHHHHHHcchhhhhcCCccchHHHHhhh
Confidence 9999999999999876 6777787776543
No 57
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=2.9e-31 Score=212.63 Aligned_cols=163 Identities=21% Similarity=0.230 Sum_probs=131.8
Q ss_pred CCccccCCChHHHHHHhcCCHHHHHHHHHcCC-CCcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHH-----hc
Q psy9957 36 PKKIKFSSGCVFLAACASSDKEEVLNLLKSGA-DINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAAC-----AS 109 (251)
Q Consensus 36 ~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~-----~~ 109 (251)
.+..+..|.||||+|+..|+.++|++|+++|+ +++..+..|+||||+ |+ ..
T Consensus 104 ~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~-----------------------a~~~~~~~~ 160 (276)
T 4hbd_A 104 VNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIML-----------------------TALATLKTQ 160 (276)
T ss_dssp HTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHH-----------------------GGGCCCCSH
T ss_pred CcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHH-----------------------HHHHHhhhh
Confidence 45566777777777777777777777777776 777777777777777 55 55
Q ss_pred CCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHH-cC
Q psy9957 110 SDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLK-SG 188 (251)
Q Consensus 110 ~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~-~~ 188 (251)
++.++++.|++.|.+++..+..|.||||+|+..|+.+++++|++.|++++..+..+.+++|.|+..++.+++++|++ .|
T Consensus 161 ~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g 240 (276)
T 4hbd_A 161 DDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPS 240 (276)
T ss_dssp HHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTT
T ss_pred hhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCC
Confidence 77888888888888887788888888888888888888888888888888888888888888888888888888886 54
Q ss_pred CCCcccCCCCCchhhhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCC
Q psy9957 189 ADINTANVDGLTALHQAGADLNFQDYDGWTPLHAAAHWAQREACQILVENF 239 (251)
Q Consensus 189 ~~~~~~~~~g~t~l~~a~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~g 239 (251)
++++.+|..|.||||+|+..|+.+++++|++++
T Consensus 241 ------------------ad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 241 ------------------CDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp ------------------CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred ------------------CCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 455667778999999999999999999999975
No 58
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=2.2e-30 Score=197.60 Aligned_cols=178 Identities=20% Similarity=0.120 Sum_probs=121.3
Q ss_pred cccchhHHHHHHHHHHHHHhhccCCCccccCCCCCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHH
Q psy9957 3 ETRSSSALFKRAEQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQ 82 (251)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~ 82 (251)
.+...++..++.+.++.++... +.+++..+..|.||||+|+..|+.+++++|+++|++++..+..|+||||+
T Consensus 7 ~~L~~A~~~g~~~~v~~ll~~~--------~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~ 78 (201)
T 3hra_A 7 GALLEAANQRDTKKVKEILQDT--------TYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLY 78 (201)
T ss_dssp THHHHHHHTTCHHHHHHHHTCT--------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred cHHHHHHHhccHHHHHHHHHcC--------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 3566788888999999887532 33567778899999999999999999999999999999999999999999
Q ss_pred HHhhCCCcccccc-----------ccCCCchhhHHHhcCCHHHHHHHHHcC-CCCccCCCCCCcHHHHHHHhCC-----c
Q psy9957 83 VSKSASTLPLHSL-----------NCGPGCVFLAACASSDKEEVLNLLKSG-ADINTANVDGLTALHQLKRWEE-----S 145 (251)
Q Consensus 83 a~~~~~~~~~~~~-----------~~~~~t~l~~a~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~~-----~ 145 (251)
|+..|+.++++.+ +..|.||||+|+..++.+++++|++.| ++++.++..|.||||+|+..+. .
T Consensus 79 A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ 158 (201)
T 3hra_A 79 AGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQ 158 (201)
T ss_dssp HHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHH
T ss_pred HHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHH
Confidence 6665555555443 334455555555555555555555555 5555555555555555555554 4
Q ss_pred chhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcC
Q psy9957 146 ETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSG 188 (251)
Q Consensus 146 ~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~ 188 (251)
+++++|++.|+++...+..+.++++.|+..++.+++++|+++|
T Consensus 159 ~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 159 DIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 5555555555555555555555555555555555555555443
No 59
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=5.6e-30 Score=187.28 Aligned_cols=151 Identities=21% Similarity=0.177 Sum_probs=141.3
Q ss_pred CChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHHHHHHHHHcC
Q psy9957 43 SGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLKSG 122 (251)
Q Consensus 43 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~g 122 (251)
..|+|+.|+..|+.+++++|+++|++++ .+..|.||||+ |+..|+.+++++|++.|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~-----------------------A~~~~~~~~v~~Ll~~g 57 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHL-----------------------AAQYGHFSTTEVLLRAG 57 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHH-----------------------HHHHTCHHHHHHHHTTT
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHH-----------------------HHHcCCHHHHHHHHHcC
Confidence 4689999999999999999999999886 68889999999 89999999999999999
Q ss_pred CCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCCCCCchh
Q psy9957 123 ADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTAL 202 (251)
Q Consensus 123 ~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l 202 (251)
++++.++..|.||||+|+..++.+++++|++.|.++...+..+.++++.|+..++.+++++|+++|++++
T Consensus 58 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---------- 127 (153)
T 1awc_B 58 VSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH---------- 127 (153)
T ss_dssp CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT----------
T ss_pred CCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc----------
Confidence 9999999999999999999999999999999999999999999999999999999999999999876654
Q ss_pred hhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHH
Q psy9957 203 HQAGADLNFQDYDGWTPLHAAAHWAQREACQIL 235 (251)
Q Consensus 203 ~~a~~~~~~~~~~g~t~l~~A~~~~~~~i~~~L 235 (251)
.+|..|.||||+|+..|+.+++++|
T Consensus 128 --------~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 128 --------TQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp --------CCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred --------ccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 5566789999999999999999987
No 60
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=1.6e-30 Score=192.44 Aligned_cols=160 Identities=23% Similarity=0.217 Sum_probs=141.9
Q ss_pred cccCCChHHHHHHhcCCHHHHHHHHHc-CCCCcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHHHHHH
Q psy9957 39 IKFSSGCVFLAACASSDKEEVLNLLKS-GADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLN 117 (251)
Q Consensus 39 ~~~~~~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~ 117 (251)
.+.++.|+|+.|+..|+.++++.|++. +.+++..+..|+||||+ |+..++.+++++
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-----------------------A~~~~~~~~v~~ 60 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHF-----------------------AAGYNRVSVVEY 60 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHH-----------------------HHHTTCHHHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHH-----------------------HHHcChHHHHHH
Confidence 356788999999999999999999984 67788888899999999 999999999999
Q ss_pred HHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCCC
Q psy9957 118 LLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVD 197 (251)
Q Consensus 118 Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~ 197 (251)
|++.|++++.++..|.||||+|+..++.+++++|++.|.++...+..+.+++|.|+..++.+++++|+++|++++.+|.
T Consensus 61 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~- 139 (165)
T 3twr_A 61 LLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNR- 139 (165)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-
T ss_pred HHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999877765554
Q ss_pred CCchhhhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCC
Q psy9957 198 GLTALHQAGADLNFQDYDGWTPLHAAAHWAQREACQILVENFC 240 (251)
Q Consensus 198 g~t~l~~a~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga 240 (251)
.|.||||+|+. ++.+++++|+++|+
T Consensus 140 -----------------~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 140 -----------------DGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp -----------------TSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred -----------------CCCChhHhHhc-CChHHHHHHhhccc
Confidence 55566666554 78899999999986
No 61
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=2.3e-29 Score=196.20 Aligned_cols=149 Identities=24% Similarity=0.217 Sum_probs=114.7
Q ss_pred hhHHHhcCCHHHHHHHHHc-CCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCC-----cccccCCCchHHHHHhcC
Q psy9957 103 FLAACASSDKEEVLNLLKS-GADINTANVDGLTALHQLKRWEESETNRQPSEMGNKP-----KKIKFSSGCVFLAACASS 176 (251)
Q Consensus 103 l~~a~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~l~~a~~~~ 176 (251)
||.|+..|+.++++.|++. |++++.+|..|.||||+|+..|+.+++++|++.+.+. ...+..+.+++|.|+..+
T Consensus 7 L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~ 86 (232)
T 2rfa_A 7 LLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQ 86 (232)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTT
T ss_pred HHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcC
Confidence 3337777777777777776 7777777777777777777777777777777776665 334456677777777777
Q ss_pred CHHHHHHHHHcCCCCcccCC-------------CCCchhhhc---------------CCCCCCCCCCCCcHHHHHHHhCc
Q psy9957 177 DKEEVLNLLKSGADINTANV-------------DGLTALHQA---------------GADLNFQDYDGWTPLHAAAHWAQ 228 (251)
Q Consensus 177 ~~~~~~~Ll~~~~~~~~~~~-------------~g~t~l~~a---------------~~~~~~~~~~g~t~l~~A~~~~~ 228 (251)
+.+++++|+++|++++..+. .|.||||+| |++++.+|..|.||||+|+..++
T Consensus 87 ~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~ 166 (232)
T 2rfa_A 87 NVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPN 166 (232)
T ss_dssp CHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSC
T ss_pred CHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 77777777777777766654 577777766 77888889999999999999999
Q ss_pred HHHH----HHHHhCCCCC------CcccccCCC
Q psy9957 229 REAC----QILVENFCDM------DVKNYVVST 251 (251)
Q Consensus 229 ~~i~----~~Ll~~ga~~------~~~d~~g~t 251 (251)
.+++ ++|+++|+++ +.+|..|+|
T Consensus 167 ~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~t 199 (232)
T 2rfa_A 167 KTFACQMYNLLLSYDGGDHLKSLELVPNNQGLT 199 (232)
T ss_dssp HHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCC
T ss_pred hHHHHHHHHHHHhcCCchhhhhhhccCCCCCCC
Confidence 9988 9999999998 589999987
No 62
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=1.3e-30 Score=204.55 Aligned_cols=167 Identities=14% Similarity=0.076 Sum_probs=120.4
Q ss_pred cCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHHHHHHHHH
Q psy9957 41 FSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLK 120 (251)
Q Consensus 41 ~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~ 120 (251)
..|.||||.|+..++.+.++.|+++|++++.. ..|.||||+ |+..|+.++++.|++
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~-----------------------A~~~g~~~~v~~Ll~ 58 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLD-----------------------SSLEGEFDLVQRIIY 58 (239)
T ss_dssp -----------------------------------CHHHHHH-----------------------HHHHTCHHHHHHHTS
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHH-----------------------HHHcCCHHHHHHHHH
Confidence 46899999999999999999999999999854 678999999 999999999999999
Q ss_pred cCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCCCCCc
Q psy9957 121 SGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLT 200 (251)
Q Consensus 121 ~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t 200 (251)
.|++++.+|..|.||||+|+..|+.+++++|++.|++++..+..+.+++|.|+..++.+++++|+++|++++..+..|
T Consensus 59 ~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~-- 136 (239)
T 1ycs_B 59 EVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSD-- 136 (239)
T ss_dssp TTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSS--
T ss_pred cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999988776655433
Q ss_pred hhhhcCCCCCCCCCCCCcHHHHH--HHhCcHHHHHHHHhCCCCCCccccc
Q psy9957 201 ALHQAGADLNFQDYDGWTPLHAA--AHWAQREACQILVENFCDMDVKNYV 248 (251)
Q Consensus 201 ~l~~a~~~~~~~~~~g~t~l~~A--~~~~~~~i~~~Ll~~ga~~~~~d~~ 248 (251)
++||||+| +..|+.+++++|+++|++++.++..
T Consensus 137 ---------------~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~ 171 (239)
T 1ycs_B 137 ---------------MQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKG 171 (239)
T ss_dssp ---------------CCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGG
T ss_pred ---------------CcchHHHHHHhhhccHHHHHHHHHhhhcccccccc
Confidence 33777777 6778999999999999999887543
No 63
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=1.3e-28 Score=180.37 Aligned_cols=153 Identities=25% Similarity=0.228 Sum_probs=140.7
Q ss_pred CChHHHHHHhcCCHHHHHHHHHc-CCCCcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHHHHHHHHHc
Q psy9957 43 SGCVFLAACASSDKEEVLNLLKS-GADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLKS 121 (251)
Q Consensus 43 ~~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~ 121 (251)
+.|+|+.|+..|+.++++.|+++ +.+++..+..|+||||+ +..|+.+++++|++.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~------------------------~~~~~~~~v~~Ll~~ 57 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV------------------------MMFGSTAIALELLKQ 57 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH------------------------SCTTCHHHHHHHHHT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH------------------------HHcCCHHHHHHHHHC
Confidence 56899999999999999999998 45899999999999996 446789999999999
Q ss_pred CCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCCCCCch
Q psy9957 122 GADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTA 201 (251)
Q Consensus 122 g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~ 201 (251)
|++++.+|..|.||||+|+..|+.+++++|++.|+++...+..+.+++|.|+..++.+++++|+++ +++
T Consensus 58 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~---------- 126 (156)
T 1bd8_A 58 GASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDL---------- 126 (156)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCT----------
T ss_pred CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCC----------
Confidence 999999999999999999999999999999999999999999999999999999999999999976 544
Q ss_pred hhhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhC
Q psy9957 202 LHQAGADLNFQDYDGWTPLHAAAHWAQREACQILVEN 238 (251)
Q Consensus 202 l~~a~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ 238 (251)
+.+|..|.||||+|+..++.+++++|+++
T Consensus 127 --------~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 127 --------HRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp --------TCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred --------CCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 45667899999999999999999999985
No 64
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.96 E-value=1.4e-29 Score=185.83 Aligned_cols=139 Identities=24% Similarity=0.220 Sum_probs=108.5
Q ss_pred ccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHHHHHH
Q psy9957 38 KIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLN 117 (251)
Q Consensus 38 ~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~ 117 (251)
..+..|.||||+|+..|+.++|++|+++|++++..+..|+||||+ |+ .++.+++++
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~-----------------------A~-~~~~~~v~~ 62 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQV-----------------------MM-MGSARVAEL 62 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTS-----------------------SC-TTCHHHHHH
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHH-----------------------HH-cCCHHHHHH
Confidence 345678999999999999999999999999999999999999998 75 889999999
Q ss_pred HHHcCCCCccCCCCCCc-HHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCC
Q psy9957 118 LLKSGADINTANVDGLT-ALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANV 196 (251)
Q Consensus 118 Ll~~g~~~~~~~~~g~t-~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 196 (251)
|++.|++++.++..|.| |||+|+..|+.+ ++++|+++|++
T Consensus 63 Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~---------------------------------~v~~Ll~~ga~------ 103 (156)
T 1bi7_B 63 LLLHGAEPNCADPATLTRPVHDAAREGFLD---------------------------------TLVVLHRAGAR------ 103 (156)
T ss_dssp HHTTTCCCCCCCTTTCCCHHHHHHHHTCHH---------------------------------HHHHHHHHTCC------
T ss_pred HHHcCCCCCCcCCCCCcHHHHHHHHCCCHH---------------------------------HHHHHHHcCCC------
Confidence 99999999999999999 999988777754 44555555443
Q ss_pred CCCchhhhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCcccccCCC
Q psy9957 197 DGLTALHQAGADLNFQDYDGWTPLHAAAHWAQREACQILVENFCDMDVKNYVVST 251 (251)
Q Consensus 197 ~g~t~l~~a~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~d~~g~t 251 (251)
++.+|..|.||||+|+..++.+++++|+++|++++.+|..|.|
T Consensus 104 ------------~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t 146 (156)
T 1bi7_B 104 ------------LDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARID 146 (156)
T ss_dssp ------------SSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC------------
T ss_pred ------------CcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCc
Confidence 3455677899999999999999999999999999999998875
No 65
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.96 E-value=5.7e-29 Score=178.39 Aligned_cols=133 Identities=26% Similarity=0.210 Sum_probs=113.3
Q ss_pred CCCCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHH
Q psy9957 34 NKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKE 113 (251)
Q Consensus 34 ~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~ 113 (251)
.+.+..+..|.||||+|+..|+.+++++|+++|++++..+..|+||||+ |+. ++.+
T Consensus 3 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~-----------------------A~~-~~~~ 58 (136)
T 1d9s_A 3 PGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQV-----------------------MMM-GSAQ 58 (136)
T ss_dssp CCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTT-----------------------STT-SCHH
T ss_pred CCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHH-----------------------HHc-CCHH
Confidence 3566778889999999999999999999999999999999999999999 888 9999
Q ss_pred HHHHHHHcCCCCccCCCC-CCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCc
Q psy9957 114 EVLNLLKSGADINTANVD-GLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADIN 192 (251)
Q Consensus 114 ~v~~Ll~~g~~~~~~~~~-g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~ 192 (251)
++++|++.|++++.++.. |.||||+|+..++.+++ ++|+++|++
T Consensus 59 ~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v---------------------------------~~Ll~~ga~-- 103 (136)
T 1d9s_A 59 VAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTL---------------------------------VVLHRAGAR-- 103 (136)
T ss_dssp HHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHH---------------------------------HHHHHTCCC--
T ss_pred HHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHH---------------------------------HHHHHcCCC--
Confidence 999999999999999999 99999998877775444 455554433
Q ss_pred ccCCCCCchhhhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCCC
Q psy9957 193 TANVDGLTALHQAGADLNFQDYDGWTPLHAAAHWAQREACQILVENFCD 241 (251)
Q Consensus 193 ~~~~~g~t~l~~a~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~ 241 (251)
++.+|..|.||||+|+..++.+++++|+++|||
T Consensus 104 ----------------~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 104 ----------------LDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp ----------------CCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred ----------------CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 445566788999999999999999999999886
No 66
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.96 E-value=2.3e-29 Score=200.99 Aligned_cols=168 Identities=18% Similarity=0.111 Sum_probs=141.8
Q ss_pred CCCCcccCCCCccHHHHHHhhCCCcccccc------------------ccCCCchhhHHHhc---CCHHHHHHHHHcCCC
Q psy9957 66 GADINTANVDGLTALHQVSKSASTLPLHSL------------------NCGPGCVFLAACAS---SDKEEVLNLLKSGAD 124 (251)
Q Consensus 66 g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~------------------~~~~~t~l~~a~~~---~~~~~v~~Ll~~g~~ 124 (251)
++..+..+..|+||||+|++.|+.++++.+ +..|.||||+|+.. |+.+++++|++.|++
T Consensus 3 ~a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~ 82 (273)
T 2pnn_A 3 SAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARK 82 (273)
T ss_dssp --------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHH
T ss_pred cccCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhcc
Confidence 455667889999999999999999988765 35789999999986 999999999999865
Q ss_pred C-------cc----CCCCCCcHHHHHHHhCCcchhhhhhhcCCCCccccc--------------CCCchHHHHHhcCCHH
Q psy9957 125 I-------NT----ANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKF--------------SSGCVFLAACASSDKE 179 (251)
Q Consensus 125 ~-------~~----~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~--------------~~~~~l~~a~~~~~~~ 179 (251)
+ +. +|..|.||||+|+..|+.+++++|++.|+++...+. .+.++||.|+..++.+
T Consensus 83 ~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~ 162 (273)
T 2pnn_A 83 TDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLA 162 (273)
T ss_dssp TTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHH
T ss_pred ccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHH
Confidence 2 22 567899999999999999999999999999988876 6899999999999999
Q ss_pred HHHHHHH---cCCCCcccCCCCCchhhhcCCCCCCCCCCCCcHHHHHHHhCc---------HHHHHHHHhCCCCCC----
Q psy9957 180 EVLNLLK---SGADINTANVDGLTALHQAGADLNFQDYDGWTPLHAAAHWAQ---------REACQILVENFCDMD---- 243 (251)
Q Consensus 180 ~~~~Ll~---~~~~~~~~~~~g~t~l~~a~~~~~~~~~~g~t~l~~A~~~~~---------~~i~~~Ll~~ga~~~---- 243 (251)
++++|++ +|++ ++.+|..|+||||+|+..++ .+++++|+++|++++
T Consensus 163 ~v~~Ll~~~~~gad------------------~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~ 224 (273)
T 2pnn_A 163 IVKFLLQNSWQPAD------------------ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLK 224 (273)
T ss_dssp HHHHHHHCSSCCCC------------------TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCC
T ss_pred HHHHHHhcccCCCC------------------ceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccc
Confidence 9999999 6544 45566788899999999888 899999999999997
Q ss_pred ---cccccCCC
Q psy9957 244 ---VKNYVVST 251 (251)
Q Consensus 244 ---~~d~~g~t 251 (251)
.+|..|+|
T Consensus 225 ~~~~~d~~g~T 235 (273)
T 2pnn_A 225 LEEITNRKGLT 235 (273)
T ss_dssp GGGCCCTTSCC
T ss_pred cccccCCCCCC
Confidence 58999987
No 67
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=2.8e-28 Score=181.54 Aligned_cols=168 Identities=20% Similarity=0.028 Sum_probs=148.4
Q ss_pred cccchhHHHHHHHHHHHHHhhccCCCccccCCCCCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHH
Q psy9957 3 ETRSSSALFKRAEQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQ 82 (251)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~ 82 (251)
.|...++..++.+.++.++.... ...+..+..|.||||+|+..|+.+++++|+++|++++..+..|+||||+
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~~~--------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 75 (172)
T 3v30_A 4 LSIHQLAAQGELDQLKEHLRKGD--------NLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSL 75 (172)
T ss_dssp CCHHHHHHTTCHHHHHHHHTTCS--------GGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHH
T ss_pred hhHHHHHHcCCHHHHHHHHHcCc--------ccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHH
Confidence 35677888999999999885422 2245567789999999999999999999999999999999999999999
Q ss_pred HHhhCCCccccccccCCCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccc
Q psy9957 83 VSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIK 162 (251)
Q Consensus 83 a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~ 162 (251)
|+..++.+++++|++.|++++.+|..|.||||+|+..++.+++++|++.|+++...+
T Consensus 76 -----------------------A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 132 (172)
T 3v30_A 76 -----------------------ASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEA 132 (172)
T ss_dssp -----------------------HHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred -----------------------HHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccC
Confidence 899999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCCCCCch
Q psy9957 163 FSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTA 201 (251)
Q Consensus 163 ~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~ 201 (251)
..+.++++.|+..++.+++++|+++++++...+..|.||
T Consensus 133 ~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 133 DSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC-------
T ss_pred CCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcccCCCCCC
Confidence 999999999999999999999999999988888887776
No 68
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.95 E-value=1.5e-28 Score=194.49 Aligned_cols=159 Identities=19% Similarity=0.098 Sum_probs=118.9
Q ss_pred CCccHHHHHHhhCCCcccccc------------------ccCCCchhhHHHhc---CCHHHHHHHHHcCCCCccC-----
Q psy9957 75 DGLTALHQVSKSASTLPLHSL------------------NCGPGCVFLAACAS---SDKEEVLNLLKSGADINTA----- 128 (251)
Q Consensus 75 ~g~tpLh~a~~~~~~~~~~~~------------------~~~~~t~l~~a~~~---~~~~~v~~Ll~~g~~~~~~----- 128 (251)
.|+||||+|++.|+.+.++.+ +..|.||||+|+.. |+.+++++|++.|++++..
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 80 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence 378899998888887654322 34566777777777 7777777777776665422
Q ss_pred ------CCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccC-------------CCchHHHHHhcCCHHHHHHHHH---
Q psy9957 129 ------NVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFS-------------SGCVFLAACASSDKEEVLNLLK--- 186 (251)
Q Consensus 129 ------~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~-------------~~~~l~~a~~~~~~~~~~~Ll~--- 186 (251)
|..|.||||+|+..|+.+++++|++.|++++..+.. +.+++|.|+..++.+++++|++
T Consensus 81 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~ 160 (256)
T 2etb_A 81 AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPH 160 (256)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSS
T ss_pred cccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 355777777777777777777777777776666554 6677777777777777777776
Q ss_pred cCCCCcccCCCCCchhhhcCCCCCCCCCCCCcHHHHHHH--hCcHH-------HHHHHHhCCCCC-------CcccccCC
Q psy9957 187 SGADINTANVDGLTALHQAGADLNFQDYDGWTPLHAAAH--WAQRE-------ACQILVENFCDM-------DVKNYVVS 250 (251)
Q Consensus 187 ~~~~~~~~~~~g~t~l~~a~~~~~~~~~~g~t~l~~A~~--~~~~~-------i~~~Ll~~ga~~-------~~~d~~g~ 250 (251)
+| ++++.+|..|+||||+|+. .++.+ ++++|+++|+++ +.+|..|+
T Consensus 161 ~g------------------a~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~ 222 (256)
T 2etb_A 161 QP------------------ASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGL 222 (256)
T ss_dssp CC------------------CCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSC
T ss_pred cC------------------CCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCC
Confidence 54 5556677789999999998 78888 999999999999 99999998
Q ss_pred C
Q psy9957 251 T 251 (251)
Q Consensus 251 t 251 (251)
|
T Consensus 223 t 223 (256)
T 2etb_A 223 T 223 (256)
T ss_dssp C
T ss_pred C
Confidence 7
No 69
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=3.3e-28 Score=194.83 Aligned_cols=134 Identities=22% Similarity=0.154 Sum_probs=126.9
Q ss_pred cCC-CCCccccCCChHHHHHH-----hcCCHHHHHHHHHcCCCCcccCCCCccHHHHHHhhCCCccccccccCCCchhhH
Q psy9957 32 MGN-KPKKIKFSSGCVFLAAC-----ASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLA 105 (251)
Q Consensus 32 ~~~-~~~~~~~~~~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~ 105 (251)
.+. +++..+..|.||||+|+ ..++.++++.|++.|..++..+..|+||||+
T Consensus 133 ~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~----------------------- 189 (276)
T 4hbd_A 133 SGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALML----------------------- 189 (276)
T ss_dssp TSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHH-----------------------
T ss_pred CCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHH-----------------------
Confidence 454 78889999999999999 6789999999999999999999999999999
Q ss_pred HHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhh-cCCCCcccccCCCchHHHHHhcCCHHHHHHH
Q psy9957 106 ACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSE-MGNKPKKIKFSSGCVFLAACASSDKEEVLNL 184 (251)
Q Consensus 106 a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L 184 (251)
|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|++ .|++++..+..+.+++++|+..++.+++++|
T Consensus 190 A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~L 269 (276)
T 4hbd_A 190 AVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASML 269 (276)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 899999999999999999999999999999999999999999999999 8999999999999999999999999999999
Q ss_pred HHcC
Q psy9957 185 LKSG 188 (251)
Q Consensus 185 l~~~ 188 (251)
++++
T Consensus 270 l~~~ 273 (276)
T 4hbd_A 270 YSRM 273 (276)
T ss_dssp HHHC
T ss_pred Hhcc
Confidence 9874
No 70
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=1.5e-27 Score=180.80 Aligned_cols=142 Identities=20% Similarity=0.224 Sum_probs=132.2
Q ss_pred CcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchh
Q psy9957 69 INTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETN 148 (251)
Q Consensus 69 ~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~ 148 (251)
++.+|..|+||||+ |+..|+.+++++|++.|++++.++..|.||||+|+..++.+++
T Consensus 28 ~n~~d~~g~t~L~~-----------------------A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v 84 (192)
T 2rfm_A 28 RNYRDSYNRTPLMV-----------------------ACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIA 84 (192)
T ss_dssp HTCCCTTCCCHHHH-----------------------HHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HhCcCCCCCCHHHH-----------------------HHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHH
Confidence 46678889999999 8889999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCCCCCchhhhcCCCCCCCCCCCCcHHHHHHHhCc
Q psy9957 149 RQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQAGADLNFQDYDGWTPLHAAAHWAQ 228 (251)
Q Consensus 149 ~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~g~t~l~~A~~~~~ 228 (251)
++|++.|.++...+..+.+++|.|+..++.+++++|+++|++++ .+|..|.||||+|+..++
T Consensus 85 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------------------~~~~~g~t~L~~A~~~~~ 146 (192)
T 2rfm_A 85 EKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVN------------------DRNLEGETPLIVASKYGR 146 (192)
T ss_dssp HHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS------------------CCCTTCCCHHHHHHHHTC
T ss_pred HHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCC------------------CCCCCCCCHHHHHHHcCC
Confidence 99999999999999999999999999999999999999876654 456678999999999999
Q ss_pred HHHHHHHHhCCCCCCcccccCCC
Q psy9957 229 REACQILVENFCDMDVKNYVVST 251 (251)
Q Consensus 229 ~~i~~~Ll~~ga~~~~~d~~g~t 251 (251)
.+++++|+++|++++.+|..|.|
T Consensus 147 ~~~v~~Ll~~ga~~~~~~~~g~t 169 (192)
T 2rfm_A 147 SEIVKKLLELGADISARDLTGLT 169 (192)
T ss_dssp HHHHHHHHHTTCCTTCBCTTSCB
T ss_pred HHHHHHHHHCCCCCCCcCCCCCC
Confidence 99999999999999999999987
No 71
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.95 E-value=2e-28 Score=184.67 Aligned_cols=162 Identities=19% Similarity=0.145 Sum_probs=136.4
Q ss_pred CChHHHHHHhcCCHHHHHHHHHcCCCCcccC-CCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCH----HHHHH
Q psy9957 43 SGCVFLAACASSDKEEVLNLLKSGADINTAN-VDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDK----EEVLN 117 (251)
Q Consensus 43 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~----~~v~~ 117 (251)
+.++|+.|++.|+.+.++.+++.+.+ ..+ ..|+||||+ |+..++. +++++
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~--~~~~~~g~T~Lh~-----------------------A~~~~~~~~~~~iv~~ 60 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYE--DKESVLKSNILYD-----------------------VLRNNNDEARYKISMF 60 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSS--CHHHHHTTTHHHH-----------------------HTTCSCHHHHHHHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCcc--cccccCCCCHHHH-----------------------HHHcCCcchHHHHHHH
Confidence 34669999999999999999987754 455 679999999 7777764 58999
Q ss_pred HHHcCCCCccCCCCCCcHHHHHHHhCCc------chhhhhhhcCCCCcccccCCC-chHHHHHhcCC-----HHHHHHHH
Q psy9957 118 LLKSGADINTANVDGLTALHQLKRWEES------ETNRQPSEMGNKPKKIKFSSG-CVFLAACASSD-----KEEVLNLL 185 (251)
Q Consensus 118 Ll~~g~~~~~~~~~g~t~l~~A~~~~~~------~~~~~l~~~~~~~~~~~~~~~-~~l~~a~~~~~-----~~~~~~Ll 185 (251)
|++.|++++.+|..|+||||+|+..++. +++++|++.|++++..+..+. +++|+|+..+. .+++++|+
T Consensus 61 Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll 140 (186)
T 3t8k_A 61 LINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIF 140 (186)
T ss_dssp HHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHH
T ss_pred HHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHH
Confidence 9999999999999999999999999874 679999999999999999999 89999888443 45778888
Q ss_pred H-cCCCCcccCCCCCchhhhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCcccc
Q psy9957 186 K-SGADINTANVDGLTALHQAGADLNFQDYDGWTPLHAAAHWAQREACQILVENFCDMDVKNY 247 (251)
Q Consensus 186 ~-~~~~~~~~~~~g~t~l~~a~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~d~ 247 (251)
+ +|++ ++.+|..|.||||+|++.++.+++++|.+...+.+.++.
T Consensus 141 ~~~gad------------------~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~~~~~ 185 (186)
T 3t8k_A 141 SQSGLQ------------------LLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLKEN 185 (186)
T ss_dssp TSTTCC------------------TTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHTCCC-
T ss_pred HhcCCC------------------CcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHhcccC
Confidence 7 6544 556677899999999999999999999998766666653
No 72
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=5.2e-27 Score=175.85 Aligned_cols=165 Identities=21% Similarity=0.157 Sum_probs=151.5
Q ss_pred cccchhHHHHHHHHHHHHHhhccCCCccccCCCCCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHH
Q psy9957 3 ETRSSSALFKRAEQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQ 82 (251)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~ 82 (251)
.+...++..++.+.++.++... +.+++..+..|.||||+|+..|+.+++++|+++|++++..+..|+||||+
T Consensus 7 ~~l~~A~~~g~~~~v~~ll~~~--------~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 78 (179)
T 3f6q_A 7 DDIFTQCREGNAVAVRLWLDNT--------ENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHL 78 (179)
T ss_dssp CCHHHHHHHTCHHHHHHHHHCT--------TSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHhcC--------cccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence 4667888999999999887542 34566778899999999999999999999999999999999999999999
Q ss_pred HHhhCCCccccccccCCCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccc
Q psy9957 83 VSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIK 162 (251)
Q Consensus 83 a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~ 162 (251)
|+..++.+++++|++.|++++.+|..|.||||+|+..++.+++++|++.|+++...+
T Consensus 79 -----------------------A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 135 (179)
T 3f6q_A 79 -----------------------AASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICN 135 (179)
T ss_dssp -----------------------HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCC
T ss_pred -----------------------HHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhc
Confidence 899999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCCCC
Q psy9957 163 FSSGCVFLAACASSDKEEVLNLLKSGADINTANVDG 198 (251)
Q Consensus 163 ~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g 198 (251)
..+.++++.|+..+..++++.|+++|++++..+..+
T Consensus 136 ~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~~~~~~ 171 (179)
T 3f6q_A 136 KYGEMPVDKAKAPLRELLRERAEKMGQNLNRIPYKD 171 (179)
T ss_dssp TTSCCGGGGSCHHHHHHHHHHHHHTTCCCSCBCCCC
T ss_pred cCCCCcHHHHHHHHHHHHHHHHHHhhcCcccCCccc
Confidence 999999999999999999999999999998766543
No 73
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.95 E-value=1e-27 Score=190.00 Aligned_cols=161 Identities=19% Similarity=0.130 Sum_probs=138.2
Q ss_pred CCCCccHHHHHHhhCCCcccccc------------------ccCCCchhhHHH---hcCCHHHHHHHHHcCCC-------
Q psy9957 73 NVDGLTALHQVSKSASTLPLHSL------------------NCGPGCVFLAAC---ASSDKEEVLNLLKSGAD------- 124 (251)
Q Consensus 73 ~~~g~tpLh~a~~~~~~~~~~~~------------------~~~~~t~l~~a~---~~~~~~~v~~Ll~~g~~------- 124 (251)
+..|++|||.|++.|+.+.++.+ +..|.||||+|+ ..|+.+++++|++.|++
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~ 81 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREF 81 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhh
Confidence 35689999999999999976555 155999999998 67999999999998754
Q ss_pred ----CccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccc--------------cCCCchHHHHHhcCCHHHHHHHHH
Q psy9957 125 ----INTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIK--------------FSSGCVFLAACASSDKEEVLNLLK 186 (251)
Q Consensus 125 ----~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~--------------~~~~~~l~~a~~~~~~~~~~~Ll~ 186 (251)
++.+|..|+||||+|+..|+.+++++|++.|++++..+ ..+.+++|.|+..++.+++++|++
T Consensus 82 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~ 161 (260)
T 3jxi_A 82 INSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTE 161 (260)
T ss_dssp HTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHH
T ss_pred hcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHh
Confidence 34455689999999999999999999999999998877 578899999999999999999998
Q ss_pred ---cCCCCcccCCCCCchhhhcCCCCCCCCCCCCcHHHHHHHhCc---------HHHHHHHHhCCCCC-------Ccccc
Q psy9957 187 ---SGADINTANVDGLTALHQAGADLNFQDYDGWTPLHAAAHWAQ---------REACQILVENFCDM-------DVKNY 247 (251)
Q Consensus 187 ---~~~~~~~~~~~g~t~l~~a~~~~~~~~~~g~t~l~~A~~~~~---------~~i~~~Ll~~ga~~-------~~~d~ 247 (251)
+|++ ++.+|..|+||||+|+..++ .+++++|+++|+++ +.+|.
T Consensus 162 ~~~~ga~------------------~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~ 223 (260)
T 3jxi_A 162 NGHKQAD------------------LRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNN 223 (260)
T ss_dssp CSSCCCC------------------TTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCT
T ss_pred ccccCCC------------------CcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccC
Confidence 6544 45566788899999998887 79999999999998 78999
Q ss_pred cCCC
Q psy9957 248 VVST 251 (251)
Q Consensus 248 ~g~t 251 (251)
.|+|
T Consensus 224 ~g~t 227 (260)
T 3jxi_A 224 DGLS 227 (260)
T ss_dssp TSCC
T ss_pred CCCC
Confidence 9987
No 74
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=9.5e-27 Score=172.40 Aligned_cols=135 Identities=19% Similarity=0.205 Sum_probs=125.0
Q ss_pred CCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCH
Q psy9957 99 PGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDK 178 (251)
Q Consensus 99 ~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~ 178 (251)
|.||||.|+..|+.++++.|++.+.+++.+|..|.||||+|+..|+.+++++|++.|.++...+..+.+++|.|+..++.
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 82 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYT 82 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred CcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCH
Confidence 45555559999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcccCCCCCchhhhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCcccccCCC
Q psy9957 179 EEVLNLLKSGADINTANVDGLTALHQAGADLNFQDYDGWTPLHAAAHWAQREACQILVENFCDMDVKNYVVST 251 (251)
Q Consensus 179 ~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~d~~g~t 251 (251)
+++++|+++|+++ +.+|..|.||||+|+..++.+++++|+++|++++.+|..|+|
T Consensus 83 ~~v~~Ll~~g~~~------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 137 (167)
T 3v31_A 83 DIVKMLLDCGVDV------------------NEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYN 137 (167)
T ss_dssp HHHHHHHHHTCCT------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred HHHHHHHHCCCCC------------------CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC
Confidence 9999999987655 455667899999999999999999999999999999999987
No 75
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=5.2e-27 Score=172.84 Aligned_cols=155 Identities=17% Similarity=0.092 Sum_probs=140.2
Q ss_pred cccchhHHHHHHHHHHHHHhhccCCCccccCCCCCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHH
Q psy9957 3 ETRSSSALFKRAEQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQ 82 (251)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~ 82 (251)
.+...++..++.+.++.++. .+.+++..+..|.||||+|+. ++.+++++|+++|++++..+..|+||||+
T Consensus 7 ~~L~~A~~~g~~~~v~~Ll~---------~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 76 (162)
T 1ihb_A 7 NELASAAARGDLEQLTSLLQ---------NNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHD 76 (162)
T ss_dssp HHHHHHHHHTCHHHHHHHTT---------SCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred hHHHHHHHcCCHHHHHHHHh---------CCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 35567788888888888863 255667788899999999999 99999999999999999999999999999
Q ss_pred HHhhCCCccccccccCCCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCC-ccc
Q psy9957 83 VSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKP-KKI 161 (251)
Q Consensus 83 a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~-~~~ 161 (251)
|+..++.+++++|++.|++++.+|..|.||||+|+..++.+++++|++.|.+. ...
T Consensus 77 -----------------------A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 133 (162)
T 1ihb_A 77 -----------------------AARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHR 133 (162)
T ss_dssp -----------------------HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCC
T ss_pred -----------------------HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCc
Confidence 88899999999999999999999999999999999999999999999999984 778
Q ss_pred ccCCCchHHHHHhcCCHHHHHHHHHcCCC
Q psy9957 162 KFSSGCVFLAACASSDKEEVLNLLKSGAD 190 (251)
Q Consensus 162 ~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~ 190 (251)
+..+.+++++|+..++.+++++|+++|++
T Consensus 134 ~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 134 NHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 88899999999999999999999999975
No 76
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.94 E-value=2.8e-26 Score=170.32 Aligned_cols=153 Identities=24% Similarity=0.205 Sum_probs=140.1
Q ss_pred ccchhHHHHHHHHHHHHHhhccCCCccccCCCCCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHH
Q psy9957 4 TRSSSALFKRAEQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQV 83 (251)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a 83 (251)
+...++..++.+.++.++.. +.+++..+..|.||||+|+..|+.+++++|+++|++++..+..|+||||+
T Consensus 17 ~l~~A~~~g~~~~v~~Ll~~---------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~- 86 (169)
T 2y1l_E 17 KLLEAARAGRDDEVRILMAN---------GADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRL- 86 (169)
T ss_dssp HHHHHHHHTCHHHHHHHHHT---------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH-
T ss_pred hHHHHHHcCCHHHHHHHHHC---------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHH-
Confidence 44567788888888777643 45667778899999999999999999999999999999999999999999
Q ss_pred HhhCCCccccccccCCCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCccccc
Q psy9957 84 SKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKF 163 (251)
Q Consensus 84 ~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~ 163 (251)
|+..++.+++++|++.|++++.+|..|.||||+|+..++.+++++|++.|+++...+.
T Consensus 87 ----------------------A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 144 (169)
T 2y1l_E 87 ----------------------AALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDK 144 (169)
T ss_dssp ----------------------HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred ----------------------HHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 8999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHhcCCHHHHHHHHHcC
Q psy9957 164 SSGCVFLAACASSDKEEVLNLLKSG 188 (251)
Q Consensus 164 ~~~~~l~~a~~~~~~~~~~~Ll~~~ 188 (251)
.+.++++.|+..++.+++++|++.|
T Consensus 145 ~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 145 FGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 9999999999999999999999875
No 77
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.94 E-value=6.5e-30 Score=212.42 Aligned_cols=193 Identities=11% Similarity=0.003 Sum_probs=154.1
Q ss_pred ccCCChHHHHHHhcCCHHHHHHHHHcCCCC---cccCCCCccHHHHHHhhCCCccccccccCC------------Cchhh
Q psy9957 40 KFSSGCVFLAACASSDKEEVLNLLKSGADI---NTANVDGLTALHQVSKSASTLPLHSLNCGP------------GCVFL 104 (251)
Q Consensus 40 ~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~------------~t~l~ 104 (251)
+.++.||||.|++.|+.++|++|+++|+.. +..+..|.||||+|++.|+.++++++...| .||||
T Consensus 89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~~TpLh 168 (376)
T 2aja_A 89 GIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFR 168 (376)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHHH
T ss_pred CCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCCCCHHH
Confidence 345569999999999999999999998832 234456889999999999999999985444 58999
Q ss_pred HHHhcCCHHHHHHHHHcCCCCcc--CCCCCCcHHHHHH-HhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHH
Q psy9957 105 AACASSDKEEVLNLLKSGADINT--ANVDGLTALHQLK-RWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEV 181 (251)
Q Consensus 105 ~a~~~~~~~~v~~Ll~~g~~~~~--~~~~g~t~l~~A~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~ 181 (251)
+|+..|+.+++++|++.|++++. +|..|.||||+|+ ..|+.+++++|++.|. .+.++++.|+..|+.+++
T Consensus 169 ~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-------~~~taL~~Aa~~g~~evv 241 (376)
T 2aja_A 169 LAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV-------MLAYAEIHEFEYGEKYVN 241 (376)
T ss_dssp HHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-------HHHHHHHCTTTTTTTTHH
T ss_pred HHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-------ccchHHHHHHHCCCHHHH
Confidence 99999999999999999999887 8889999999999 9999999999999763 267899999999999999
Q ss_pred HHHHHcCCCCcccCC-------CCCchh----------------hhc--------------------CCCCCCCCCCCCc
Q psy9957 182 LNLLKSGADINTANV-------DGLTAL----------------HQA--------------------GADLNFQDYDGWT 218 (251)
Q Consensus 182 ~~Ll~~~~~~~~~~~-------~g~t~l----------------~~a--------------------~~~~~~~~~~g~t 218 (251)
++|+++|++++..+. .|...+ ..+ -.+.......+.|
T Consensus 242 ~lL~~~ga~~~~~~~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~ 321 (376)
T 2aja_A 242 PFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANE 321 (376)
T ss_dssp HHHHHHHHHHHHHHTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCH
T ss_pred HHHHhcCcccccccHHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccH
Confidence 999999887755432 221110 000 0011122346779
Q ss_pred HHHHHHHhCcHHHHHHHHhCC
Q psy9957 219 PLHAAAHWAQREACQILVENF 239 (251)
Q Consensus 219 ~l~~A~~~~~~~i~~~Ll~~g 239 (251)
|||+|+..|+.+++++|+++|
T Consensus 322 ~L~~A~~~g~~e~v~lLl~~~ 342 (376)
T 2aja_A 322 LLRLALRLGNQGACALLLSIP 342 (376)
T ss_dssp HHHHHHHHTCTTHHHHHTTSH
T ss_pred HHHHHHHcCcHHHHHHHHcCh
Confidence 999999999999999999986
No 78
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=3.7e-26 Score=168.85 Aligned_cols=154 Identities=22% Similarity=0.194 Sum_probs=137.9
Q ss_pred ccchhHHHHHHHHHHHHHhhccCCCccccCCCCCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHH
Q psy9957 4 TRSSSALFKRAEQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQV 83 (251)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a 83 (251)
+...++..++.+.++.++... +...+..+..|.||||+|+..|+.+++++|+++|++++..+..|+||||+
T Consensus 11 ~l~~A~~~g~~~~v~~ll~~~--------~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~- 81 (165)
T 3twr_A 11 QLLEAAKAGDVETVKKLCTVQ--------SVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHN- 81 (165)
T ss_dssp HHHHHHHHTCHHHHHHHCCTT--------TTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH-
T ss_pred HHHHHHHhCCHHHHHHHHHcC--------CCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHH-
Confidence 456778888888888886432 34455667788999999999999999999999999999999999999999
Q ss_pred HhhCCCccccccccCCCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCccccc
Q psy9957 84 SKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKF 163 (251)
Q Consensus 84 ~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~ 163 (251)
|+..++.+++++|++.|++++.+|..|.||||+|+..++.+++++|++.|+++...+.
T Consensus 82 ----------------------A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 139 (165)
T 3twr_A 82 ----------------------ACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNR 139 (165)
T ss_dssp ----------------------HHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred ----------------------HHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCC
Confidence 8999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHhcCCHHHHHHHHHcCC
Q psy9957 164 SSGCVFLAACASSDKEEVLNLLKSGA 189 (251)
Q Consensus 164 ~~~~~l~~a~~~~~~~~~~~Ll~~~~ 189 (251)
.+.++++.|.. ++.+++++|+++|+
T Consensus 140 ~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 140 DGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp TSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred CCCChhHhHhc-CChHHHHHHhhccc
Confidence 99999999766 88999999998875
No 79
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=4.6e-27 Score=183.08 Aligned_cols=152 Identities=18% Similarity=0.150 Sum_probs=123.0
Q ss_pred HHHHHHcCCCCcccCC---CCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcH
Q psy9957 59 VLNLLKSGADINTANV---DGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTA 135 (251)
Q Consensus 59 v~~Ll~~g~~~~~~~~---~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 135 (251)
|+.|+++|++++..+. .|.||||+ |+..|+.+++++|++.|++++.+|..|+||
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~-----------------------A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tp 57 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLD-----------------------AALTGELEVVQQAVKEMNDPSQPNEEGITA 57 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHH-----------------------HHHHTCHHHHHHHHHHSSCTTCCCTTSCCH
T ss_pred CeehhccCCCCccccccccchhHHHHH-----------------------HHHcCCHHHHHHHHhcCCCCCCCCCCCCCH
Confidence 4678889988776544 46677777 999999999999999999999999999999
Q ss_pred HHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCCCCCchhhhcCCCCCCCCCC
Q psy9957 136 LHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQAGADLNFQDYD 215 (251)
Q Consensus 136 l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 215 (251)
||+|+..|+.+++++|++.|++++..+..+.+++|.|+..++.+++++|+++|++++..+. ..
T Consensus 58 Lh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~-----------------~~ 120 (229)
T 2vge_A 58 LHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTL-----------------SD 120 (229)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCS-----------------ST
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccC-----------------CC
Confidence 9999999999999999999999999999999999999999999999999999888776541 34
Q ss_pred CCcHHHHH--HHhCcHHHHHHHHhCCCCCCcccccCC
Q psy9957 216 GWTPLHAA--AHWAQREACQILVENFCDMDVKNYVVS 250 (251)
Q Consensus 216 g~t~l~~A--~~~~~~~i~~~Ll~~ga~~~~~d~~g~ 250 (251)
|.||||+| +..++.+++++|+++|++++.+|..|.
T Consensus 121 g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~ 157 (229)
T 2vge_A 121 GATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAV 157 (229)
T ss_dssp TCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEE
T ss_pred CCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCch
Confidence 55555555 677888888888888888888776653
No 80
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.94 E-value=6.5e-26 Score=162.37 Aligned_cols=128 Identities=27% Similarity=0.248 Sum_probs=120.1
Q ss_pred ccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHHHHHH
Q psy9957 38 KIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLN 117 (251)
Q Consensus 38 ~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~ 117 (251)
.....+.||||+|+..|+.+++++|+++|++++..|..|+||||+ |+..++.+++++
T Consensus 9 ~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~-----------------------A~~~~~~~~v~~ 65 (136)
T 2jab_A 9 HHGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYL-----------------------ATAHGHLEIVEV 65 (136)
T ss_dssp ---CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH-----------------------HHHHTCHHHHHH
T ss_pred cccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHH-----------------------HHHcCCHHHHHH
Confidence 445678899999999999999999999999999999999999999 889999999999
Q ss_pred HHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcC
Q psy9957 118 LLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSG 188 (251)
Q Consensus 118 Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~ 188 (251)
|++.|++++.+|..|.||||+|+..++.+++++|++.|+++...+..+.++++.|+..++.+++++|+++|
T Consensus 66 Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 66 LLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999875
No 81
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.93 E-value=1.7e-25 Score=157.47 Aligned_cols=126 Identities=29% Similarity=0.301 Sum_probs=121.5
Q ss_pred CCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHHHHHHHHHc
Q psy9957 42 SSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLKS 121 (251)
Q Consensus 42 ~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~ 121 (251)
+|.||||.|+..|+.+++++|+++|++++..+..|.||||+ |+..++.+++++|++.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~-----------------------A~~~~~~~~~~~Ll~~ 57 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHL-----------------------AARNGHLEVVKLLLEA 57 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHH-----------------------HHHHTCHHHHHHHHHT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHH-----------------------HHHcCcHHHHHHHHHc
Confidence 58899999999999999999999999999999999999999 8889999999999999
Q ss_pred CCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCC
Q psy9957 122 GADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGAD 190 (251)
Q Consensus 122 g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~ 190 (251)
|++++.++..|.||||+|+..++.+++++|++.|.++...+..+.++++.|+..++.+++++|+++|++
T Consensus 58 g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 58 GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred CCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999875
No 82
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.93 E-value=1.4e-25 Score=163.72 Aligned_cols=149 Identities=17% Similarity=0.131 Sum_probs=135.1
Q ss_pred cccchhHHHHHHHHHHHHHhhccCCCccccCCCCCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHH
Q psy9957 3 ETRSSSALFKRAEQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQ 82 (251)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~ 82 (251)
.+...++..++.+.++.++.... +. ..+..|.||||+|+..|+.+++++|+++|++++..+..|+||||+
T Consensus 4 ~~L~~A~~~g~~~~v~~Ll~~g~---------~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 73 (153)
T 1awc_B 4 KKLLEAARAGQDDEVRILMANGA---------PF-TTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHM 73 (153)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHTC---------CC-CCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHcCC---------CC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 45667888888888888875522 22 246789999999999999999999999999999999999999999
Q ss_pred HHhhCCCccccccccCCCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccc
Q psy9957 83 VSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIK 162 (251)
Q Consensus 83 a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~ 162 (251)
|+..++.+++++|++.|++++.+|..|.||||+|+..++.+++++|++.|+++...+
T Consensus 74 -----------------------A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 130 (153)
T 1awc_B 74 -----------------------AASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQS 130 (153)
T ss_dssp -----------------------HHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred -----------------------HHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccC
Confidence 888999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhcCCHHHHHHH
Q psy9957 163 FSSGCVFLAACASSDKEEVLNL 184 (251)
Q Consensus 163 ~~~~~~l~~a~~~~~~~~~~~L 184 (251)
..+.++++.|+..++.+++++|
T Consensus 131 ~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 131 KFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHh
Confidence 9999999999999999998876
No 83
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.93 E-value=1.9e-26 Score=181.37 Aligned_cols=144 Identities=24% Similarity=0.317 Sum_probs=118.8
Q ss_pred cccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHHHHHHH
Q psy9957 39 IKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNL 118 (251)
Q Consensus 39 ~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~L 118 (251)
.+..|.||||.|+..|+.++|+.|++ |++++..|..|+||||+ |+..|+.+++++|
T Consensus 41 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~-----------------------A~~~g~~~~v~~L 96 (244)
T 3ui2_A 41 VVSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLF-----------------------VAGLGSDKCVRLL 96 (244)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHH-----------------------HHHHTCHHHHHHH
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHH-----------------------HHHCCCHHHHHHH
Confidence 44578899999999999999999998 89999999999999999 8888889999999
Q ss_pred HHcCCCCccCC-CCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCCC
Q psy9957 119 LKSGADINTAN-VDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVD 197 (251)
Q Consensus 119 l~~g~~~~~~~-~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~ 197 (251)
++.|++++.++ ..|.||||+|+..|+ .+++++|+++|++++.+|..
T Consensus 97 l~~ga~~~~~~~~~g~t~L~~A~~~g~---------------------------------~~~v~~Ll~~ga~~~~~d~~ 143 (244)
T 3ui2_A 97 AEAGADLDHRDMRGGLTALHMAAGYVR---------------------------------PEVVEALVELGADIEVEDER 143 (244)
T ss_dssp HHTTCCTTCCCSSSCCCHHHHHHHTTC---------------------------------HHHHHHHHHTTCCTTCCCTT
T ss_pred HHcCCCCCcCCCCCCCCHHHHHHHcCC---------------------------------HHHHHHHHHCCCCCCCCCCC
Confidence 99999998887 678899998877666 45666666777777788888
Q ss_pred CCchhhhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCCC
Q psy9957 198 GLTALHQAGADLNFQDYDGWTPLHAAAHWAQREACQILVENFCD 241 (251)
Q Consensus 198 g~t~l~~a~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~ 241 (251)
|.||||+|... .....+.||||+|+..|+.+++++|++++.+
T Consensus 144 g~t~l~~A~~~--~~~~~~~~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 144 GLTALELAREI--LKTTPKGNPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp CCCHHHHHHHH--HTTCCCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred CCcHHHHHHHH--HhccCCCCHHHHHHHcChHHHHHHHHHhccc
Confidence 88888877321 1235689999999999999999999997543
No 84
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.93 E-value=3.1e-25 Score=162.35 Aligned_cols=152 Identities=16% Similarity=0.135 Sum_probs=138.5
Q ss_pred cccchhHHHHHHHHHHHHHhhccCCCccccCCCCCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHH
Q psy9957 3 ETRSSSALFKRAEQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQ 82 (251)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~ 82 (251)
.+...++..++.+.++.++.. . +.+++..+..|.||||+ +..|+.+++++|+++|++++..|..|+||||+
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~-~-------~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 74 (156)
T 1bd8_A 4 DRLSGAAARGDVQEVRRLLHR-E-------LVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHD 74 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHHHT-T-------CCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred hHHHHHHHhCCHHHHHHHHHh-h-------CcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHH
Confidence 355678888889998888754 1 33556677889999999 99999999999999999999999999999999
Q ss_pred HHhhCCCccccccccCCCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccc
Q psy9957 83 VSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIK 162 (251)
Q Consensus 83 a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~ 162 (251)
|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|++. .++...+
T Consensus 75 -----------------------A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~ 130 (156)
T 1bd8_A 75 -----------------------AARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRD 130 (156)
T ss_dssp -----------------------HHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCC
T ss_pred -----------------------HHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcC
Confidence 8999999999999999999999999999999999999999999999999 8888899
Q ss_pred cCCCchHHHHHhcCCHHHHHHHHHc
Q psy9957 163 FSSGCVFLAACASSDKEEVLNLLKS 187 (251)
Q Consensus 163 ~~~~~~l~~a~~~~~~~~~~~Ll~~ 187 (251)
..+.++++.|+..++.+++++|+++
T Consensus 131 ~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 131 ARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp TTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 9999999999999999999999864
No 85
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.93 E-value=3.5e-25 Score=155.90 Aligned_cols=125 Identities=30% Similarity=0.301 Sum_probs=114.4
Q ss_pred CCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCH
Q psy9957 99 PGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDK 178 (251)
Q Consensus 99 ~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~ 178 (251)
|.||||.|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|++.|.++...+..+.++++.|+..++.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~ 81 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChH
Confidence 44444449999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcccCCCCCchhhhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCCC
Q psy9957 179 EEVLNLLKSGADINTANVDGLTALHQAGADLNFQDYDGWTPLHAAAHWAQREACQILVENFCD 241 (251)
Q Consensus 179 ~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~ 241 (251)
+++++|+++|+++ +.+|..|.||||+|+..++.+++++|+++|||
T Consensus 82 ~~~~~Ll~~g~~~------------------~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 82 EVVKLLLEAGADV------------------NAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHHTTCCT------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHHHcCCCC------------------cccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 9999999987655 45566789999999999999999999999986
No 86
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.93 E-value=1e-25 Score=169.51 Aligned_cols=141 Identities=26% Similarity=0.326 Sum_probs=119.8
Q ss_pred cccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHHHHHHH
Q psy9957 39 IKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNL 118 (251)
Q Consensus 39 ~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~L 118 (251)
.+..|.||||.|+..|+.++++.|++ |++++..|..|+||||+ |+..|+.+++++|
T Consensus 40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~-----------------------A~~~~~~~~v~~L 95 (183)
T 3deo_A 40 VVSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLF-----------------------VAGLGSDKCVRLL 95 (183)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHH-----------------------HHHHTCHHHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHH-----------------------HHHcCCHHHHHHH
Confidence 45688999999999999999999999 99999999999999999 8889999999999
Q ss_pred HHcCCCCccCC-CCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCCC
Q psy9957 119 LKSGADINTAN-VDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVD 197 (251)
Q Consensus 119 l~~g~~~~~~~-~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~ 197 (251)
++.|++++.++ ..|.||||+|+..|+. +++++|+++|++++.+|..
T Consensus 96 l~~ga~~~~~~~~~g~tpL~~A~~~~~~---------------------------------~~v~~Ll~~ga~~~~~d~~ 142 (183)
T 3deo_A 96 AEAGADLDHRDMRGGLTALHMAAGYVRP---------------------------------EVVEALVELGADIEVEDER 142 (183)
T ss_dssp HHTTCCTTCCCSSSSCCHHHHHHHTTCH---------------------------------HHHHHHHHHTCCTTCCCTT
T ss_pred HHcCCCCCcCCCCCCCCHHHHHHhcCcH---------------------------------HHHHHHHHcCCCCcCCCCC
Confidence 99999999888 7899999998776664 5666666677777778888
Q ss_pred CCchhhhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhC
Q psy9957 198 GLTALHQAGADLNFQDYDGWTPLHAAAHWAQREACQILVEN 238 (251)
Q Consensus 198 g~t~l~~a~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ 238 (251)
|.||||+|.... ....+.+||++|+..|+.+++++|.++
T Consensus 143 g~tpl~~A~~~~--~~~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 143 GLTALELAREIL--KTTPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp SCCHHHHHHHHH--HTCCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHhc--cCcccccHHHHHHHcCHHHHHHHHHHh
Confidence 888888773211 124578999999999999999999876
No 87
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.93 E-value=4.4e-26 Score=176.58 Aligned_cols=138 Identities=20% Similarity=0.110 Sum_probs=101.0
Q ss_pred cccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHHHHHHH
Q psy9957 39 IKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNL 118 (251)
Q Consensus 39 ~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~L 118 (251)
.+..|.||||+||..|+.++|+.|+++|++++.+|..|+||||+ |+..|+.+++++|
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~-----------------------A~~~~~~~~v~~L 125 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYW-----------------------ACHGGHKDIVEML 125 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH-----------------------HHHTTCHHHHHHH
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHH-----------------------HHHcCCHHHHHHH
Confidence 34567889999999999999999999999999999999999999 8888899999999
Q ss_pred HHc-CCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCCC
Q psy9957 119 LKS-GADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVD 197 (251)
Q Consensus 119 l~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~ 197 (251)
++. |++++.+|..|.||||+|+..|+. +++++|+++|++
T Consensus 126 l~~~g~~~~~~d~~g~tpL~~A~~~~~~---------------------------------~~v~~Ll~~ga~------- 165 (222)
T 3ehr_A 126 FTQPNIELNQQNKLGDTALHAAAWKGYA---------------------------------DIVQLLLAKGAR------- 165 (222)
T ss_dssp TTSTTCCCCCCCTTSCCHHHHHHHHTCH---------------------------------HHHHHHHHHTCC-------
T ss_pred HcCCCCCccccCCCCCCHHHHHHHcCCH---------------------------------HHHHHHHHcCCC-------
Confidence 988 899999999999999988877665 455555555444
Q ss_pred CCchhhhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCcccccCC
Q psy9957 198 GLTALHQAGADLNFQDYDGWTPLHAAAHWAQREACQILVENFCDMDVKNYVVS 250 (251)
Q Consensus 198 g~t~l~~a~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~d~~g~ 250 (251)
++.+|..|.||||+|+..++.++++.|++.|++.+.+|.+|+
T Consensus 166 -----------~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 166 -----------TDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDY 207 (222)
T ss_dssp -----------SCCCCTTSCCHHHHCCSHHHHHHHC-----------------
T ss_pred -----------CccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhhh
Confidence 445667788999999999999999999999999988887765
No 88
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.92 E-value=7.8e-25 Score=156.71 Aligned_cols=121 Identities=25% Similarity=0.195 Sum_probs=110.6
Q ss_pred chhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHH
Q psy9957 101 CVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEE 180 (251)
Q Consensus 101 t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~ 180 (251)
||||.|+..|+.+++++|++.|++++.+|..|.||||+|+..++.+++++|++.|++++..+..+.+++|.|+..++.++
T Consensus 16 t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~ 95 (136)
T 2jab_A 16 KKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEI 95 (136)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHH
Confidence 33444999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcccCCCCCchhhhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCC
Q psy9957 181 VLNLLKSGADINTANVDGLTALHQAGADLNFQDYDGWTPLHAAAHWAQREACQILVENF 239 (251)
Q Consensus 181 ~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~g 239 (251)
+++|+++|+++ +.+|..|.||||+|+..++.+++++|+++|
T Consensus 96 v~~Ll~~g~~~------------------~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 96 AEVLLKHGADV------------------NAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHTTCCT------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHHcCCCC------------------cCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999987555 455667899999999999999999999987
No 89
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.92 E-value=8.6e-26 Score=177.01 Aligned_cols=142 Identities=20% Similarity=0.194 Sum_probs=123.9
Q ss_pred ccCCCCCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcC
Q psy9957 31 EMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASS 110 (251)
Q Consensus 31 ~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~ 110 (251)
+.+.+++ .+..+.||||.|+..|+.++|+.|+++|++++..|..|+||||+ |+..|
T Consensus 26 ~~g~~~~-~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~-----------------------A~~~g 81 (239)
T 1ycs_B 26 AHGMRVK-FNPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHN-----------------------AVCAG 81 (239)
T ss_dssp ------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHH-----------------------HHHHT
T ss_pred ccCCCcc-cCchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH-----------------------HHHcC
Confidence 3444554 34678999999999999999999999999999999999999999 89999
Q ss_pred CHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCC-chHHHH--HhcCCHHHHHHHHHc
Q psy9957 111 DKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSG-CVFLAA--CASSDKEEVLNLLKS 187 (251)
Q Consensus 111 ~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~l~~a--~~~~~~~~~~~Ll~~ 187 (251)
+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|++.|+++...+..+. ++++.| +..++.+++++|+++
T Consensus 82 ~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~ 161 (239)
T 1ycs_B 82 HTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV 161 (239)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999998888777 999998 788889999999999
Q ss_pred CCCCcccCC
Q psy9957 188 GADINTANV 196 (251)
Q Consensus 188 ~~~~~~~~~ 196 (251)
|++++..+.
T Consensus 162 ~a~~~~~~~ 170 (239)
T 1ycs_B 162 QEKMGIMNK 170 (239)
T ss_dssp HHHTTTTGG
T ss_pred hhccccccc
Confidence 988877643
No 90
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.92 E-value=1.1e-25 Score=169.59 Aligned_cols=162 Identities=12% Similarity=0.042 Sum_probs=135.1
Q ss_pred cccchhHHHHHHHHHHHHHhhccCCCccccCCCCCccc-cCCChHHHHHHhcCCH----HHHHHHHHcCCCCcccCCCCc
Q psy9957 3 ETRSSSALFKRAEQLKRWEESETNRQPSEMGNKPKKIK-FSSGCVFLAACASSDK----EEVLNLLKSGADINTANVDGL 77 (251)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~t~L~~A~~~~~~----~~v~~Ll~~g~~~~~~~~~g~ 77 (251)
++...++..++.+.++..+... ++..+ ..|.||||+|+..++. +++++|+++|++++.++..|+
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~-----------~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~ 76 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKG-----------YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGT 76 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHS-----------SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCC
T ss_pred cHHHHHHHcCCHHHHHHHHhcC-----------cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCC
Confidence 4667889999999999887543 12334 6799999999999985 599999999999999999999
Q ss_pred cHHHHHHhhCCCccccccccCCCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCCC-cHHHHHHHhCC-----cchhhhh
Q psy9957 78 TALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLKSGADINTANVDGL-TALHQLKRWEE-----SETNRQP 151 (251)
Q Consensus 78 tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~-t~l~~A~~~~~-----~~~~~~l 151 (251)
||||+|+..++.++ .+..+++++|++.|++++.+|..|. ||||+|+..+. .+++++|
T Consensus 77 TpLh~a~~~~~~~~-----------------~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~L 139 (186)
T 3t8k_A 77 TLFFPLFQGGGNDI-----------------TGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLI 139 (186)
T ss_dssp CTHHHHHHHCTTCH-----------------HHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHH
T ss_pred cHHHHHHHcCCcch-----------------hhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHH
Confidence 99999555443211 1136889999999999999999999 99999999554 4689999
Q ss_pred hh-cCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCc
Q psy9957 152 SE-MGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADIN 192 (251)
Q Consensus 152 ~~-~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~ 192 (251)
++ .|++++..+..+.+|+++|+..+..+++++|+++....+
T Consensus 140 l~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~ 181 (186)
T 3t8k_A 140 FSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYN 181 (186)
T ss_dssp HTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHT
T ss_pred HHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHh
Confidence 99 999999999999999999999999999999987644333
No 91
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.92 E-value=2.2e-25 Score=159.74 Aligned_cols=130 Identities=22% Similarity=0.182 Sum_probs=107.7
Q ss_pred CCCCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHH
Q psy9957 34 NKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKE 113 (251)
Q Consensus 34 ~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~ 113 (251)
.++ ..+..|.||||+|+..|+.+++++|+++|++++..+..|+||||+ |+..++.+
T Consensus 2 ~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~-----------------------A~~~~~~~ 57 (137)
T 3c5r_A 2 IDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHE-----------------------ACNHGHLK 57 (137)
T ss_dssp --C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHH-----------------------HHHTTCHH
T ss_pred CCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHH-----------------------HHHcCCHH
Confidence 344 577889999999999999999999999999999999999999999 88899999
Q ss_pred HHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHc
Q psy9957 114 EVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKS 187 (251)
Q Consensus 114 ~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~ 187 (251)
++++|++.|++++.+|..|.||||+|+..++.+++++|++.|+++...+..+.+++++|+..+..+++.+|.+.
T Consensus 58 ~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~ 131 (137)
T 3c5r_A 58 VVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKN 131 (137)
T ss_dssp HHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC---
T ss_pred HHHHHHHcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccc
Confidence 99999999999999999999999999998888888887777777777777777777777666655555554443
No 92
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.91 E-value=1.4e-23 Score=181.03 Aligned_cols=124 Identities=17% Similarity=0.138 Sum_probs=94.8
Q ss_pred hHHHHHHhcCCHHHHHHHHHcCCCCccc------CCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHHHHHHH
Q psy9957 45 CVFLAACASSDKEEVLNLLKSGADINTA------NVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNL 118 (251)
Q Consensus 45 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~------~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~L 118 (251)
+.||.|+..|+.+.|+.|+++|++++.. +..|+||||+|++ ++..|+.+++++|
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~--------------------~a~~g~~~~v~~L 193 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVK--------------------VANQASLPLVDFI 193 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHH--------------------TCCTTTHHHHHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHH--------------------hcccccHHHHHHH
Confidence 6799999999999999999999999977 7889999999333 2458999999999
Q ss_pred HHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcC
Q psy9957 119 LKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSG 188 (251)
Q Consensus 119 l~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~ 188 (251)
++.|++++.+|..|+||||+|+..|+.+++++|++.|++++..+..+.+++++|+..++.+++++|+++|
T Consensus 194 l~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~g 263 (497)
T 3lvq_E 194 IQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQ 263 (497)
T ss_dssp HHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred HHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhC
Confidence 9999999999999999999999888877666666665554444444444444444444444444444443
No 93
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.90 E-value=5.2e-24 Score=149.74 Aligned_cols=111 Identities=23% Similarity=0.182 Sum_probs=91.5
Q ss_pred cccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHHHHHHH
Q psy9957 39 IKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNL 118 (251)
Q Consensus 39 ~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~L 118 (251)
.+..|.||||.|+..|+.+++++|+++|++++..+..|+||||+ |+..++.+++++|
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~-----------------------A~~~~~~~~v~~L 59 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHY-----------------------AADCGQLEILEFL 59 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHH-----------------------HHHTTCHHHHHHH
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHH-----------------------HHHcCCHHHHHHH
Confidence 34578899999999999999999999999999999999999999 8999999999999
Q ss_pred HHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHH
Q psy9957 119 LKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAA 172 (251)
Q Consensus 119 l~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a 172 (251)
++.|++++.+|..|+||||+|+..++.+++++|++.|+++...+..+.++++.|
T Consensus 60 l~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A 113 (123)
T 3aaa_C 60 LLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEAT 113 (123)
T ss_dssp HTTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHC
T ss_pred HHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHh
Confidence 999999999999999999999888876666666665555555555555555554
No 94
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.90 E-value=2e-23 Score=149.48 Aligned_cols=133 Identities=23% Similarity=0.210 Sum_probs=110.8
Q ss_pred CCCCcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCc
Q psy9957 66 GADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEES 145 (251)
Q Consensus 66 g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~ 145 (251)
|+++ .++..|+||||+ |+..|+.+++++|++.|++++.+|..|.||||+|+..++.
T Consensus 1 G~d~-~~~~~g~t~L~~-----------------------A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 56 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHI-----------------------ASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHL 56 (137)
T ss_dssp ---C-CCCTTCCCHHHH-----------------------HHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCH
T ss_pred CCCC-CcCCCCCCHHHH-----------------------HHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCH
Confidence 5667 678888999998 9999999999999999999999999999999999999999
Q ss_pred chhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCCCCCchhhhcCCCCCCCCCCCCcHHHHHHH
Q psy9957 146 ETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQAGADLNFQDYDGWTPLHAAAH 225 (251)
Q Consensus 146 ~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~g~t~l~~A~~ 225 (251)
+++++|++.|.++...+..+.+++|+|+..++.+++++|+++|++++.+|. .|.||||+|+.
T Consensus 57 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~------------------~g~tpl~~A~~ 118 (137)
T 3c5r_A 57 KVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNI------------------FGLRPVDYTDD 118 (137)
T ss_dssp HHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT------------------TSCCGGGGCCC
T ss_pred HHHHHHHHcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC------------------CCCCHHHHHhh
Confidence 999999999999999999999999999999999999999999877765554 45555566666
Q ss_pred hCcHHHHHHHHhCCC
Q psy9957 226 WAQREACQILVENFC 240 (251)
Q Consensus 226 ~~~~~i~~~Ll~~ga 240 (251)
.+..+++++|.+.+.
T Consensus 119 ~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 119 ESMKSLLLLPEKNES 133 (137)
T ss_dssp HHHHHHHSCC-----
T ss_pred ccHHHHHhhcccccc
Confidence 677777777766654
No 95
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.90 E-value=1.6e-23 Score=169.38 Aligned_cols=125 Identities=18% Similarity=0.141 Sum_probs=117.2
Q ss_pred CChHHHHHHhcCCHHHHHHHHHcCCCCcc------cCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhc---CCHH
Q psy9957 43 SGCVFLAACASSDKEEVLNLLKSGADINT------ANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACAS---SDKE 113 (251)
Q Consensus 43 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~---~~~~ 113 (251)
..++|+.|+..++.+.++.|++.|++++. .+..|+||||+ |+.. ++.+
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~-----------------------A~~~~~~~~~~ 207 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHL-----------------------AVKVANQASLP 207 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHH-----------------------HHHTCCTTTHH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHH-----------------------HHHhcccCcHH
Confidence 45679999999999999999999999987 58899999999 6655 8999
Q ss_pred HHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCC
Q psy9957 114 EVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGAD 190 (251)
Q Consensus 114 ~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~ 190 (251)
++++|++.|++++.+|..|.||||+|+..|+.+++++|++.|+++...+..+.+++++|+..++.+++++|+++|++
T Consensus 208 iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~ 284 (301)
T 2b0o_E 208 LVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG 284 (301)
T ss_dssp HHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998754
No 96
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.90 E-value=3.6e-26 Score=189.89 Aligned_cols=172 Identities=9% Similarity=-0.025 Sum_probs=141.5
Q ss_pred CChHHHHHHh-cCCHHHHHHHHHcCCCCcccCCCCccHHHHHHhhCCCcccccccc-------------CCCchhhHHHh
Q psy9957 43 SGCVFLAACA-SSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSLNC-------------GPGCVFLAACA 108 (251)
Q Consensus 43 ~~t~L~~A~~-~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~~~-------------~~~t~l~~a~~ 108 (251)
+.++++.|.. .++.+.+++|+++|.+ ++||||+|++.|+.++++.+.. .|.||||+|+.
T Consensus 65 ~ll~~~~a~~~~~~~~~~~~l~~~g~~-------~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~ 137 (376)
T 2aja_A 65 QLLCLYYAHYNRNAKQLWSDAHKKGIK-------SEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAE 137 (376)
T ss_dssp HHHHHHHHHTTTTCTTHHHHHHHHTCC-------HHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHcCCC-------cCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHH
Confidence 3456777766 5788999999988765 3599999999999998887732 34579999999
Q ss_pred cCCHHHHHHHHHcCCCC---ccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcc--cccCCCchHHHHH-hcCCHHHHH
Q psy9957 109 SSDKEEVLNLLKSGADI---NTANVDGLTALHQLKRWEESETNRQPSEMGNKPKK--IKFSSGCVFLAAC-ASSDKEEVL 182 (251)
Q Consensus 109 ~~~~~~v~~Ll~~g~~~---~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~l~~a~-~~~~~~~~~ 182 (251)
.|+.++|++|++.|+++ +..+.. .||||+|+..|+.+++++|++.|+++.. .+..+.++++.|+ ..|+.++++
T Consensus 138 ~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~ 216 (376)
T 2aja_A 138 NGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVIN 216 (376)
T ss_dssp TTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHH
T ss_pred cCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHH
Confidence 99999999999999762 333333 8999999999999999999999988776 6777889999999 999999999
Q ss_pred HHHHcCCCCcccCCCCCchhhhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCcccc
Q psy9957 183 NLLKSGADINTANVDGLTALHQAGADLNFQDYDGWTPLHAAAHWAQREACQILVENFCDMDVKNY 247 (251)
Q Consensus 183 ~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~d~ 247 (251)
+|+++|+ .|.||||+|+..|+.+++++|+++|++++.+|.
T Consensus 217 ~Ll~~ga-------------------------~~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~~ 256 (376)
T 2aja_A 217 FLLDCPV-------------------------MLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHD 256 (376)
T ss_dssp HHTTSHH-------------------------HHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHT
T ss_pred HHHhCCC-------------------------ccchHHHHHHHCCCHHHHHHHHhcCcccccccH
Confidence 9997651 267999999999999999999999988766544
No 97
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.90 E-value=3.5e-23 Score=138.25 Aligned_cols=93 Identities=32% Similarity=0.366 Sum_probs=87.4
Q ss_pred CCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHHHHHHHHHc
Q psy9957 42 SSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLKS 121 (251)
Q Consensus 42 ~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~ 121 (251)
+|.||||+|+..|+.+++++|+++|++++.+|..|+||||+ |+..++.+++++|++.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~-----------------------A~~~~~~~~v~~Ll~~ 57 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHL-----------------------AARNGHLEVVKLLLEA 57 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH-----------------------HHHTTCHHHHHHHHHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHH-----------------------HHHcCCHHHHHHHHHc
Confidence 47899999999999999999999999999999999999999 8999999999999999
Q ss_pred CCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCC
Q psy9957 122 GADINTANVDGLTALHQLKRWEESETNRQPSEMGNK 157 (251)
Q Consensus 122 g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~ 157 (251)
|++++.+|..|.||||+|+..++.+++++|++.|++
T Consensus 58 ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 58 GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999999988753
No 98
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.89 E-value=6.2e-23 Score=146.77 Aligned_cols=111 Identities=24% Similarity=0.177 Sum_probs=89.8
Q ss_pred CCCCcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCc
Q psy9957 66 GADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEES 145 (251)
Q Consensus 66 g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~ 145 (251)
+++++..+..|.||||+ |+..|+.+++++|++.|++++.++..|.||||+|+. ++
T Consensus 2 ~~~~~~~~~~g~t~L~~-----------------------A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~- 56 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLAT-----------------------AAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GS- 56 (136)
T ss_dssp CCCCSCCCCCCSCHHHH-----------------------HHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SC-
T ss_pred CCCccCCCCCCccHHHH-----------------------HHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CC-
Confidence 45677777778888888 888888888888888888888888888888887765 55
Q ss_pred chhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCCCCCchhhhcCCCCCCCCCC-CCcHHHHHH
Q psy9957 146 ETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQAGADLNFQDYD-GWTPLHAAA 224 (251)
Q Consensus 146 ~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~-g~t~l~~A~ 224 (251)
.+++++|+++|+++ +.+|.. |.||||+|+
T Consensus 57 --------------------------------~~~v~~Ll~~g~~~------------------~~~~~~~g~t~L~~A~ 86 (136)
T 1d9s_A 57 --------------------------------AQVAELLLLHGAEP------------------NCADPATLTRPVHDAA 86 (136)
T ss_dssp --------------------------------HHHHHHHHHHTCCS------------------SCCBTTTTBCHHHHHH
T ss_pred --------------------------------HHHHHHHHHCCCCC------------------CCcCCCCCCCHHHHHH
Confidence 45556666665444 445566 899999999
Q ss_pred HhCcHHHHHHHHhCCCCCCcccccCCC
Q psy9957 225 HWAQREACQILVENFCDMDVKNYVVST 251 (251)
Q Consensus 225 ~~~~~~i~~~Ll~~ga~~~~~d~~g~t 251 (251)
..++.+++++|+++|++++.+|..|+|
T Consensus 87 ~~~~~~~v~~Ll~~ga~~~~~d~~g~t 113 (136)
T 1d9s_A 87 REGFLDTLVVLHRAGARLDVCDAWGRL 113 (136)
T ss_dssp HHTCHHHHHHHHHTCCCCCCCSSSSSC
T ss_pred HcCCHHHHHHHHHcCCCCCccCCCCCC
Confidence 999999999999999999999999987
No 99
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.89 E-value=2.8e-22 Score=160.41 Aligned_cols=127 Identities=22% Similarity=0.225 Sum_probs=106.2
Q ss_pred CChHHHHHHhcCCHHHHHHHHHcCCCCc------ccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhc---CCHH
Q psy9957 43 SGCVFLAACASSDKEEVLNLLKSGADIN------TANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACAS---SDKE 113 (251)
Q Consensus 43 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~------~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~---~~~~ 113 (251)
..++|+.|+..++.+.+..+++.|++++ ..+..|+||||+ |+.. ++.+
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~-----------------------A~~~~~~~~~~ 186 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHL-----------------------AVRSVDRTSLH 186 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHH-----------------------HHHHCCTTTHH
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchH-----------------------HHHhcccchHH
Confidence 3467999999999999999999999954 447789999999 7776 8999
Q ss_pred HHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcc
Q psy9957 114 EVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINT 193 (251)
Q Consensus 114 ~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~ 193 (251)
++++|++.|++++.+|..|.||||+|+..|+.+++ ++|+++|++
T Consensus 187 ~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v---------------------------------~~Ll~~gad--- 230 (278)
T 1dcq_A 187 IVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECL---------------------------------KLLLRGKAS--- 230 (278)
T ss_dssp HHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHH---------------------------------HHHHHTTCC---
T ss_pred HHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHH---------------------------------HHHHHcCCC---
Confidence 99999999999999999999999998887775544 455555433
Q ss_pred cCCCCCchhhhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCC
Q psy9957 194 ANVDGLTALHQAGADLNFQDYDGWTPLHAAAHWAQREACQILVENFCDMD 243 (251)
Q Consensus 194 ~~~~g~t~l~~a~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~ 243 (251)
++.+|..|.||||+|+..|+.+++++|+++|++..
T Consensus 231 ---------------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 265 (278)
T 1dcq_A 231 ---------------IEIANESGETPLDIAKRLKHEHCEELLTQALSGRF 265 (278)
T ss_dssp ---------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCC
T ss_pred ---------------CCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 45566788999999999999999999999998643
No 100
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.88 E-value=1.4e-22 Score=167.79 Aligned_cols=164 Identities=19% Similarity=0.150 Sum_probs=117.9
Q ss_pred CCChHHHHHHhc-CCHHHHHHHHHcCCCCcccC--CCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHHHHHHH
Q psy9957 42 SSGCVFLAACAS-SDKEEVLNLLKSGADINTAN--VDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNL 118 (251)
Q Consensus 42 ~~~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~~--~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~L 118 (251)
.+.|+||.|+.. ++.++++.|+++|++++..+ ..|+||||+ |+..|+.+++++|
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~-----------------------Aa~~g~~~iv~~L 254 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQ-----------------------ATAANSLLACEFL 254 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHH-----------------------HHHTTCHHHHHHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHH-----------------------HHHCCCHHHHHHH
Confidence 456799999999 99999999999999999988 789999999 8999999999999
Q ss_pred HHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCCCcccCCCC
Q psy9957 119 LKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDG 198 (251)
Q Consensus 119 l~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g 198 (251)
+++|++++.+|..|.||||+|+..|+.+++++|+++|+++...+..+.+++++|+..++.+++++|+..+....
T Consensus 255 L~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~------ 328 (368)
T 3jue_A 255 LQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREA------ 328 (368)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC---------
T ss_pred HHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcc------
Confidence 99999999999999999999999999999999999999999999999999999999999999999987753221
Q ss_pred CchhhhcCCCCCCCCCCCCcHHHHHHHhC--cHHHHHHHHhCCCCCC
Q psy9957 199 LTALHQAGADLNFQDYDGWTPLHAAAHWA--QREACQILVENFCDMD 243 (251)
Q Consensus 199 ~t~l~~a~~~~~~~~~~g~t~l~~A~~~~--~~~i~~~Ll~~ga~~~ 243 (251)
+....+..+.|+++++.... ..+-.+.|.+++.+++
T Consensus 329 ---------~~~~~~~~~~t~l~i~~~~~~~~~~~~ekl~r~~~~~~ 366 (368)
T 3jue_A 329 ---------EAAQGQAGDETYLDIFRDFSLMASDDPEKLSRRSHDLH 366 (368)
T ss_dssp -----------------------------------------------
T ss_pred ---------cccccCCCCCCHHHHHHHHHhhcCCCHHHHHhcCCCcC
Confidence 11222344556666554433 2334556666665554
No 101
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.88 E-value=2.5e-22 Score=141.08 Aligned_cols=105 Identities=25% Similarity=0.208 Sum_probs=94.0
Q ss_pred chhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHH
Q psy9957 101 CVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEE 180 (251)
Q Consensus 101 t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~ 180 (251)
||||.|+..|+.++++.|++.|++++.++..|+||||+|+..++.+++++|++.|.+++..+..+.+++|.|+..++.++
T Consensus 9 ~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~ 88 (123)
T 3aaa_C 9 KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSC 88 (123)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred hHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHH
Confidence 34444999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcccCCCCCchhhhc
Q psy9957 181 VLNLLKSGADINTANVDGLTALHQA 205 (251)
Q Consensus 181 ~~~Ll~~~~~~~~~~~~g~t~l~~a 205 (251)
+++|+++|++++.+|..|.||+|+|
T Consensus 89 v~~Ll~~ga~~~~~~~~g~t~l~~A 113 (123)
T 3aaa_C 89 VKLLLSKGADKTVKGPDGLTAFEAT 113 (123)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHC
T ss_pred HHHHHHcCCCCCCcCCCCCCHHHHh
Confidence 9999999888776666555555544
No 102
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.87 E-value=5.7e-22 Score=132.28 Aligned_cols=92 Identities=35% Similarity=0.389 Sum_probs=73.3
Q ss_pred CCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCH
Q psy9957 99 PGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDK 178 (251)
Q Consensus 99 ~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~ 178 (251)
|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..++.+++
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v------------------------------ 51 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVV------------------------------ 51 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH------------------------------
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHH------------------------------
Confidence 34444449999999999999999999999999999999998877775544
Q ss_pred HHHHHHHHcCCCCcccCCCCCchhhhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCCC
Q psy9957 179 EEVLNLLKSGADINTANVDGLTALHQAGADLNFQDYDGWTPLHAAAHWAQREACQILVENFCD 241 (251)
Q Consensus 179 ~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~ 241 (251)
++|+++|++ ++.+|..|.||||+|+..++.+++++|+++|++
T Consensus 52 ---~~Ll~~ga~------------------~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 52 ---KLLLEAGAD------------------VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp ---HHHHHTTCC------------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred ---HHHHHcCCC------------------CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 455554433 445667788999999999999999999999985
No 103
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.87 E-value=2.2e-22 Score=147.23 Aligned_cols=133 Identities=16% Similarity=0.145 Sum_probs=105.3
Q ss_pred cccchhHHHHHHHHHHHHHhhccCCCccccCCCCCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCcc-HHH
Q psy9957 3 ETRSSSALFKRAEQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLT-ALH 81 (251)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-pLh 81 (251)
.+...++..+..+-++.++.. +.+++..+..|.||||+|+ .|+.+++++|+++|++++..+..|+| |||
T Consensus 14 t~L~~A~~~g~~~~v~~Ll~~---------g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~ 83 (156)
T 1bi7_B 14 DWLATAAARGRVEEVRALLEA---------GANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVH 83 (156)
T ss_dssp THHHHHHHHTCHHHHHHHHTT---------TCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHc---------CCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHH
Confidence 345567778888887777632 4567778889999999985 99999999999999999999999999 999
Q ss_pred HHHhhCCCccccccccCCCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCccc
Q psy9957 82 QVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKI 161 (251)
Q Consensus 82 ~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~ 161 (251)
+ |+..|+.+++++|++.|++++.+|..|.||||+|+..++.+++++|+++|+++...
T Consensus 84 ~-----------------------A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~ 140 (156)
T 1bi7_B 84 D-----------------------AAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGS 140 (156)
T ss_dssp H-----------------------HHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC------
T ss_pred H-----------------------HHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCcc
Confidence 9 88899999999999999999999999999999999988887777777777666555
Q ss_pred ccCCCch
Q psy9957 162 KFSSGCV 168 (251)
Q Consensus 162 ~~~~~~~ 168 (251)
+..+.++
T Consensus 141 ~~~g~t~ 147 (156)
T 1bi7_B 141 NHARIDA 147 (156)
T ss_dssp -------
T ss_pred CcCcCcc
Confidence 5444443
No 104
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.86 E-value=4.8e-22 Score=137.88 Aligned_cols=105 Identities=30% Similarity=0.331 Sum_probs=89.3
Q ss_pred cccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHHHHHHH
Q psy9957 39 IKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNL 118 (251)
Q Consensus 39 ~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~L 118 (251)
.+..|.||||+|+..++.+++++|+++|++++..|..|+||||+ |+..++.+++++|
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~-----------------------A~~~~~~~~~~~L 61 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHL-----------------------AAKNGHAEIVKLL 61 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHH-----------------------HHTTTCHHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH-----------------------HHHcCcHHHHHHH
Confidence 56789999999999999999999999999999999999999999 8889999999999
Q ss_pred HHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCC
Q psy9957 119 LKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSG 166 (251)
Q Consensus 119 l~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~ 166 (251)
++.|++++.+|..|.||||+|+..++.+++++|++.|++++.....+.
T Consensus 62 l~~g~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~ 109 (115)
T 2l6b_A 62 LAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSS 109 (115)
T ss_dssp TTTTCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHHHHSCCCC
T ss_pred HHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCcccc
Confidence 999999999999999999998888777666666666666555444443
No 105
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.85 E-value=1e-21 Score=151.89 Aligned_cols=106 Identities=20% Similarity=0.090 Sum_probs=87.2
Q ss_pred ccCCCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhc
Q psy9957 96 NCGPGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACAS 175 (251)
Q Consensus 96 ~~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~ 175 (251)
+..|.||||.|+..|+.++++.|++.|++++.+|..|.||||+|+..|+.+++++|++.+
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~-------------------- 129 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQP-------------------- 129 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTST--------------------
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCC--------------------
Confidence 445566777788888888899998888888888888888888888777766555555431
Q ss_pred CCHHHHHHHHHcCCCCcccCCCCCchhhhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCcccccCCC
Q psy9957 176 SDKEEVLNLLKSGADINTANVDGLTALHQAGADLNFQDYDGWTPLHAAAHWAQREACQILVENFCDMDVKNYVVST 251 (251)
Q Consensus 176 ~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~d~~g~t 251 (251)
+++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus 130 ------------------------------g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t 175 (222)
T 3ehr_A 130 ------------------------------NIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKL 175 (222)
T ss_dssp ------------------------------TCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCC
T ss_pred ------------------------------CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCC
Confidence 3445667778999999999999999999999999999999999987
No 106
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.85 E-value=5.6e-21 Score=158.19 Aligned_cols=124 Identities=22% Similarity=0.212 Sum_probs=113.8
Q ss_pred CCchhhHHHhc-CCHHHHHHHHHcCCCCccCC--CCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhc
Q psy9957 99 PGCVFLAACAS-SDKEEVLNLLKSGADINTAN--VDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACAS 175 (251)
Q Consensus 99 ~~t~l~~a~~~-~~~~~v~~Ll~~g~~~~~~~--~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~ 175 (251)
+.|+||.|+.. ++.++++.|++.|++++.++ ..|.||||+|+..|+.+++++|+++|++++..+..+.++||+|+..
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~ 278 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATIL 278 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 44677779999 99999999999999999988 8899999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCcccCCCCCchhhhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCC
Q psy9957 176 SDKEEVLNLLKSGADINTANVDGLTALHQAGADLNFQDYDGWTPLHAAAHWAQREACQILVENFC 240 (251)
Q Consensus 176 ~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga 240 (251)
++.+++++|+++|++++ .+|..|.||||+|+..++.+++++|++.|.
T Consensus 279 g~~~~v~~LL~~Gad~~------------------~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~ 325 (368)
T 3jue_A 279 GHTGLACLFLKRGADLG------------------ARDSEGRDPLTIAMETANADIVTLLRLAKM 325 (368)
T ss_dssp TCHHHHHHHHHTTCCTT------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHHHC
T ss_pred CcHHHHHHHHHCcCCCC------------------CcCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 99999999999876654 556678999999999999999999998864
No 107
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.84 E-value=9.1e-21 Score=153.27 Aligned_cols=126 Identities=17% Similarity=0.086 Sum_probs=115.1
Q ss_pred CCchhhHHHhcCCHHHHHHHHHcCCCCcc------CCCCCCcHHHHHHHh---CCcchhhhhhhcCCCCcccccCCCchH
Q psy9957 99 PGCVFLAACASSDKEEVLNLLKSGADINT------ANVDGLTALHQLKRW---EESETNRQPSEMGNKPKKIKFSSGCVF 169 (251)
Q Consensus 99 ~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~l~~A~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~l 169 (251)
+.++|+.|+..++.+.++.|++.|++++. ++..|.||||+|+.. ++.+++++|++.|++++..+..+.++|
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpL 230 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 230 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHH
Confidence 34679999999999999999999999998 688999999999997 889999999999999999999999999
Q ss_pred HHHHhcCCHHHHHHHHHcCCCCcccCCCCCchhhhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCC
Q psy9957 170 LAACASSDKEEVLNLLKSGADINTANVDGLTALHQAGADLNFQDYDGWTPLHAAAHWAQREACQILVENFCDM 242 (251)
Q Consensus 170 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~ 242 (251)
|+|+..++.+++++|+++|++++ .+|..|.||||+|+..++.+++++|+++|++.
T Consensus 231 h~A~~~g~~~~v~~Ll~~gad~~------------------~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~~ 285 (301)
T 2b0o_E 231 HYAALYNQPDCLKLLLKGRALVG------------------TVNEAGETALDIARKKHHKECEELLEQAQAGT 285 (301)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCCS------------------CCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHHcCCCCC------------------CcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCC
Confidence 99999999999999999876664 45567889999999999999999999998763
No 108
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.83 E-value=3.4e-20 Score=127.58 Aligned_cols=98 Identities=24% Similarity=0.279 Sum_probs=85.8
Q ss_pred ccCCCCCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcC
Q psy9957 31 EMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASS 110 (251)
Q Consensus 31 ~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~ 110 (251)
.....+...+.+|.|+||+|+..|+.+++++|+++|++++..|..|+||||+ |+..+
T Consensus 12 ~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~-----------------------A~~~~ 68 (110)
T 2zgd_A 12 GLVPRGSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHL-----------------------AARNG 68 (110)
T ss_dssp C---------CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHH-----------------------HHHTT
T ss_pred CCCCcccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHH-----------------------HHHcC
Confidence 3445566788999999999999999999999999999999999999999999 99999
Q ss_pred CHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhh
Q psy9957 111 DKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQP 151 (251)
Q Consensus 111 ~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l 151 (251)
+.+++++|++.|++++.+|..|.||||+|+..++.+++++|
T Consensus 69 ~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 69 HLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred CHHHHHHHHHcCCCccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 99999999999999999999999999999999999998876
No 109
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.83 E-value=1.2e-20 Score=130.71 Aligned_cols=97 Identities=26% Similarity=0.213 Sum_probs=91.6
Q ss_pred HHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHH
Q psy9957 106 ACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLL 185 (251)
Q Consensus 106 a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll 185 (251)
|+..++.+++++|++.|++++.+|..|.||||+|+..++.+++++|++.|+++...+..+.++++.|+..++.+++++|+
T Consensus 16 A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll 95 (115)
T 2l6b_A 16 AAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLD 95 (115)
T ss_dssp HHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHTTTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCcccCCCCCchh
Q psy9957 186 KSGADINTANVDGLTAL 202 (251)
Q Consensus 186 ~~~~~~~~~~~~g~t~l 202 (251)
++|++++.++..|.+|-
T Consensus 96 ~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 96 AKGADVNARSWGSSHHH 112 (115)
T ss_dssp TTSSSHHHHSCCCC---
T ss_pred HcCCCCCcCCccccccc
Confidence 99999999999988874
No 110
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.82 E-value=5.2e-20 Score=138.19 Aligned_cols=132 Identities=23% Similarity=0.217 Sum_probs=112.2
Q ss_pred chhHHHHHHHHHHHHHhhccCCCccccCCCCCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccC-CCCccHHHHHH
Q psy9957 6 SSSALFKRAEQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTAN-VDGLTALHQVS 84 (251)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~tpLh~a~ 84 (251)
..++..+..+.++.++. +.+++..+..|.||||+|+..|+.+++++|+++|++++..+ ..|+||||+
T Consensus 49 ~~A~~~g~~~~v~~Ll~----------~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~-- 116 (183)
T 3deo_A 49 WTAARKADEQALSQLLE----------DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHM-- 116 (183)
T ss_dssp HHHHHTTCHHHHHHHTT----------TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHH--
T ss_pred HHHHHcCCHHHHHHHHh----------cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHH--
Confidence 34555556666665553 45677788899999999999999999999999999999998 889999999
Q ss_pred hhCCCccccccccCCCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccC
Q psy9957 85 KSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFS 164 (251)
Q Consensus 85 ~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~ 164 (251)
|+..++.+++++|++.|++++.+|..|.||||+|+..++.. .
T Consensus 117 ---------------------A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~-----------------~ 158 (183)
T 3deo_A 117 ---------------------AAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTT-----------------P 158 (183)
T ss_dssp ---------------------HHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHTC-----------------C
T ss_pred ---------------------HHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccCc-----------------c
Confidence 89999999999999999999999999999999999876642 3
Q ss_pred CCchHHHHHhcCCHHHHHHHHHc
Q psy9957 165 SGCVFLAACASSDKEEVLNLLKS 187 (251)
Q Consensus 165 ~~~~l~~a~~~~~~~~~~~Ll~~ 187 (251)
..+++++++..+..++++.|.++
T Consensus 159 ~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 159 KGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHTC
T ss_pred cccHHHHHHHcCHHHHHHHHHHh
Confidence 45677889999988999888754
No 111
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.82 E-value=4.9e-20 Score=147.39 Aligned_cols=99 Identities=22% Similarity=0.223 Sum_probs=93.1
Q ss_pred CccccCCChHHHHHHhc---CCHHHHHHHHHcCCCCcccCCCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHH
Q psy9957 37 KKIKFSSGCVFLAACAS---SDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKE 113 (251)
Q Consensus 37 ~~~~~~~~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~ 113 (251)
+..+..|.||||+|+.. ++.+++++|+++|++++.+|..|+||||+ |+..|+.+
T Consensus 163 ~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~-----------------------A~~~g~~~ 219 (278)
T 1dcq_A 163 ANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHY-----------------------CCLTDNAE 219 (278)
T ss_dssp SSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHH-----------------------HHHTTCHH
T ss_pred cccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHH-----------------------HHHcCCHH
Confidence 34467899999999999 89999999999999999999999999999 99999999
Q ss_pred HHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCC
Q psy9957 114 EVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKP 158 (251)
Q Consensus 114 ~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~ 158 (251)
++++|++.|++++.+|..|.||||+|+..|+.+++++|++.|++.
T Consensus 220 ~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 220 CLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999999999999988754
No 112
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.82 E-value=4.9e-20 Score=158.92 Aligned_cols=125 Identities=18% Similarity=0.124 Sum_probs=106.2
Q ss_pred cchhHHHHHHHHHHHHHhhccCCCccccCCCCCcc------ccCCChHHHHHHh---cCCHHHHHHHHHcCCCCcccCCC
Q psy9957 5 RSSSALFKRAEQLKRWEESETNRQPSEMGNKPKKI------KFSSGCVFLAACA---SSDKEEVLNLLKSGADINTANVD 75 (251)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~t~L~~A~~---~~~~~~v~~Ll~~g~~~~~~~~~ 75 (251)
+..++..++.+.++.++.. +.+++.. +..|.||||+||. .|+.++|++|+++|+++|.+|..
T Consensus 136 L~~A~~~g~~~~v~~ll~~---------g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~ 206 (497)
T 3lvq_E 136 LWTAICNRDLLSVLEAFAN---------GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAAD 206 (497)
T ss_dssp HHHHHHHTCHHHHHHHHHT---------TCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSS
T ss_pred HHHHHhccCHHHHHHHHhh---------cccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCC
Confidence 4456667777777777644 3333333 7789999999976 89999999999999999999999
Q ss_pred CccHHHHHHhhCCCccccccccCCCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcC
Q psy9957 76 GLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMG 155 (251)
Q Consensus 76 g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~ 155 (251)
|+||||+ |+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|++.|
T Consensus 207 g~TpLh~-----------------------A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~g 263 (497)
T 3lvq_E 207 GNTALHY-----------------------AALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQ 263 (497)
T ss_dssp SCCHHHH-----------------------HTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred CCcHHHH-----------------------HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhC
Confidence 9999999 99999999999999999999999999999999999999999999999999
Q ss_pred CCCccc
Q psy9957 156 NKPKKI 161 (251)
Q Consensus 156 ~~~~~~ 161 (251)
+++...
T Consensus 264 a~~~~~ 269 (497)
T 3lvq_E 264 AGTFAF 269 (497)
T ss_dssp C-----
T ss_pred CCCCCC
Confidence 887653
No 113
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.82 E-value=7.6e-20 Score=143.56 Aligned_cols=118 Identities=23% Similarity=0.221 Sum_probs=106.7
Q ss_pred CCCCCccccCCChHHHHHHhcCCHHHHHHHHHcCCCCcccC-CCCccHHHHHHhhCCCccccccccCCCchhhHHHhcCC
Q psy9957 33 GNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTAN-VDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSD 111 (251)
Q Consensus 33 ~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~tpLh~a~~~~~~~~~~~~~~~~~t~l~~a~~~~~ 111 (251)
+.+++..+..|.||||+||..|+.++|++|+++|++++..+ ..|+||||+ |+..|+
T Consensus 67 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~-----------------------A~~~g~ 123 (244)
T 3ui2_A 67 DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHM-----------------------AAGYVR 123 (244)
T ss_dssp TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHH-----------------------HHHTTC
T ss_pred CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHH-----------------------HHHcCC
Confidence 45778888999999999999999999999999999999998 779999999 999999
Q ss_pred HHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCHHHHHHHHHcCCC
Q psy9957 112 KEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGAD 190 (251)
Q Consensus 112 ~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~ 190 (251)
.+++++|++.|++++.+|..|.||||+|+..++. ..+.+++++|+..++.+++++|++++.+
T Consensus 124 ~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~-----------------~~~~~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 124 PEVVEALVELGADIEVEDERGLTALELAREILKT-----------------TPKGNPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHTT-----------------CCCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHhc-----------------cCCCCHHHHHHHcChHHHHHHHHHhccc
Confidence 9999999999999999999999999999875442 4567899999999999999999986443
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.68 E-value=1.1e-16 Score=109.92 Aligned_cols=86 Identities=22% Similarity=0.220 Sum_probs=78.7
Q ss_pred CCchhhHHHhcCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHHhCCcchhhhhhhcCCCCcccccCCCchHHHHHhcCCH
Q psy9957 99 PGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDK 178 (251)
Q Consensus 99 ~~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~ 178 (251)
|+|+||.|+..|+.+++++|++.|++++.+|..|.||||+|+..++.+++++|++.|+++...+..+.++++.|+..++.
T Consensus 24 g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~ 103 (110)
T 2zgd_A 24 LGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNE 103 (110)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHHcCCH
Confidence 33333339999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH
Q psy9957 179 EEVLNL 184 (251)
Q Consensus 179 ~~~~~L 184 (251)
+++++|
T Consensus 104 ~~~~~L 109 (110)
T 2zgd_A 104 DLAEIL 109 (110)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 998875
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=58.07 E-value=9.2 Score=19.67 Aligned_cols=17 Identities=29% Similarity=0.206 Sum_probs=15.2
Q ss_pred HHHHHhcCCHHHHHHHH
Q psy9957 47 FLAACASSDKEEVLNLL 63 (251)
Q Consensus 47 L~~A~~~~~~~~v~~Ll 63 (251)
+..||..|+++.++.|-
T Consensus 17 iyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHTTSCHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHH
Confidence 67899999999999984
No 116
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=23.57 E-value=2.6e+02 Score=23.16 Aligned_cols=61 Identities=21% Similarity=0.180 Sum_probs=41.1
Q ss_pred HHhcCCHHHHHHHHHcCCCCcccCCCCCchhhhcC-CCCCCCCCCCCcHHHHHHHhCcHHHHHHHHh
Q psy9957 172 ACASSDKEEVLNLLKSGADINTANVDGLTALHQAG-ADLNFQDYDGWTPLHAAAHWAQREACQILVE 237 (251)
Q Consensus 172 a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~-~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~ 237 (251)
.+..|+...++..+.+|.+++-+= |+-..+- ..++. =.-|.|.+|+|++..+.+++..|+.
T Consensus 29 gv~e~~~~~ve~y~~~gg~~~r~l----t~~e~~lln~~~a-f~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 29 GVVEGDLAAIEAYKSSGGDIARQL----TADEVRLLNRPSA-FDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCCC----CHHHHHHHCCTTT-CCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHcCChhHHHHHHhcCCchhccc----CHHHHHHhCCCcc-cccCchhhhhhhhhhhhhHHHHhhh
Confidence 456688888888888887776431 2111110 00111 2358899999999999999999986
Done!