RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9957
(251 letters)
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1,
MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Length = 291
Score = 115 bits (288), Expect = 1e-31
Identities = 95/268 (35%), Positives = 122/268 (45%), Gaps = 31/268 (11%)
Query: 5 RSSSALFKRAEQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLK 64
+ + A KR EQLKRW SET+ +P + K K+KF G VFLAAC+S D EEVL LL+
Sbjct: 2 KMADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLE 61
Query: 65 SGADINTANVDGLTALHQVSKSAST----------LPLHSLNCGPGCVFLAACASSDKEE 114
GADIN ANVDGLTALHQ + ++ + AA + +
Sbjct: 62 RGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDI 121
Query: 115 VLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACA 174
L+ GA + N +G T L + E + + + A
Sbjct: 122 AEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDA 181
Query: 175 SSDKEEVLNLLKSGADINTANVDGLTALH---------------QAGADLNFQDYDGWTP 219
L + G TALH QA D+N +DYDGWTP
Sbjct: 182 RQ------WLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTP 235
Query: 220 LHAAAHWAQREACQILVENFCDMDVKNY 247
LHAAAHW + EAC+ILVEN CDM+ N
Sbjct: 236 LHAAAHWGKEEACRILVENLCDMEAVNK 263
Score = 43.9 bits (102), Expect = 6e-06
Identities = 17/89 (19%), Positives = 27/89 (30%)
Query: 117 NLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASS 176
L + G TALH +E + + + AA
Sbjct: 184 WLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWG 243
Query: 177 DKEEVLNLLKSGADINTANVDGLTALHQA 205
+E L+++ D+ N G TA A
Sbjct: 244 KEEACRILVENLCDMEAVNKVGQTAFDVA 272
Score = 40.9 bits (94), Expect = 6e-05
Identities = 19/87 (21%), Positives = 30/87 (34%), Gaps = 23/87 (26%)
Query: 51 CASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASS 110
A E + L+++ D+N + DG T LH AA
Sbjct: 207 AAKGYTEVLKLLIQARYDVNIKDYDGWTPLH-----------------------AAAHWG 243
Query: 111 DKEEVLNLLKSGADINTANVDGLTALH 137
+E L+++ D+ N G TA
Sbjct: 244 KEEACRILVENLCDMEAVNKVGQTAFD 270
Score = 35.5 bits (80), Expect = 0.005
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 39 IKFSSGCVFLAACASSDKEEVLN-LLKSGADINTANVDGLTALH 81
IK G L A A KEE L+++ D+ N G TA
Sbjct: 227 IKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFD 270
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId:
9606]}
Length = 408
Score = 85.0 bits (209), Expect = 1e-19
Identities = 48/213 (22%), Positives = 64/213 (30%), Gaps = 38/213 (17%)
Query: 50 ACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACAS 109
A V NLL+ GA N +NV T LH A +
Sbjct: 7 ASFMGHLPIVKNLLQRGASPNVSNVKVETPLH-----------------------MAARA 43
Query: 110 SDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVF 169
E LL++ A +N D T LH R + + E P +
Sbjct: 44 GHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPL 103
Query: 170 LAACASSDKEEVLNLLKSGADINTANVDGLTALHQA---------------GADLNFQDY 214
A E VL LL+ A G T LH A A N
Sbjct: 104 HIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGK 163
Query: 215 DGWTPLHAAAHWAQREACQILVENFCDMDVKNY 247
+G TPLH A H + ++L+ +
Sbjct: 164 NGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAW 196
Score = 75.0 bits (183), Expect = 3e-16
Identities = 49/216 (22%), Positives = 66/216 (30%), Gaps = 25/216 (11%)
Query: 45 CVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCV-- 102
A ++ + V LL G ++ +G T LH +K SL G
Sbjct: 167 TPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANA 226
Query: 103 --------FLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEM 154
A E V LL A+ N N GLT LH + + +
Sbjct: 227 ESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKH 286
Query: 155 GNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQA--------- 205
G A + + V LL+ AD+N G + LHQA
Sbjct: 287 GVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIV 346
Query: 206 ------GADLNFQDYDGWTPLHAAAHWAQREACQIL 235
GA N DG TPL A +L
Sbjct: 347 TLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVL 382
Score = 70.4 bits (171), Expect = 1e-14
Identities = 47/222 (21%), Positives = 73/222 (32%), Gaps = 38/222 (17%)
Query: 45 CVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFL 104
A LL+ A N A +GLT LH
Sbjct: 134 TPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLH----------------------- 170
Query: 105 AACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFS 164
A ++ + V LL G ++ +G T LH + + E R + G
Sbjct: 171 VAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQ 230
Query: 165 SGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQA---------------GADL 209
A E V LL A+ N N GLT LH G +
Sbjct: 231 GVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMV 290
Query: 210 NFQDYDGWTPLHAAAHWAQREACQILVENFCDMDVKNYVVST 251
+ G+TPLH A+H+ + + L+++ D++ K + +
Sbjct: 291 DATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYS 332
Score = 67.7 bits (164), Expect = 1e-13
Identities = 47/223 (21%), Positives = 71/223 (31%), Gaps = 25/223 (11%)
Query: 50 ACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSL----------NCGP 99
A + E LL++ A +N D T LH ++ T + L
Sbjct: 40 AARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAG 99
Query: 100 GCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPK 159
A E VL LL+ A G T LH ++ + E P
Sbjct: 100 HTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPN 159
Query: 160 KIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALH---------------Q 204
+ A ++ + V LL G ++ +G T LH Q
Sbjct: 160 AAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQ 219
Query: 205 AGADLNFQDYDGWTPLHAAAHWAQREACQILVENFCDMDVKNY 247
G N + G TPLH AA E +L+ + ++ N
Sbjct: 220 YGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNK 262
Score = 32.6 bits (73), Expect = 0.044
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 218 TPLHAAAHWAQREACQILVENFCDMDVKNY 247
TPLH A+ + L++ +V N
Sbjct: 2 TPLHVASFMGHLPIVKNLLQRGASPNVSNV 31
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human
(Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 70.0 bits (170), Expect = 8e-15
Identities = 52/278 (18%), Positives = 80/278 (28%), Gaps = 75/278 (26%)
Query: 46 VFLAACASSDKEEVLNLLKSGADINTA-NVDGLTALHQVSKSAST----------LPLHS 94
+ + A + D + V LL+ GA++N G T LH + +
Sbjct: 8 LLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVL 67
Query: 95 LNCGPGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQ---------LKRWEES 145
FL A + + + L GAD+N + G TA + LK +
Sbjct: 68 RKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKR 127
Query: 146 ETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVL----------------------- 182
N + ++ G L A EVL
Sbjct: 128 GANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALI 187
Query: 183 ----------------NLLKSGADINTANVDGLTALHQA----------------GADLN 210
LL GAD+N G T L A ++N
Sbjct: 188 HALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEIN 247
Query: 211 FQDYDGWTPLHAAAHWAQREACQILVENFCDMDVKNYV 248
D DG T L A ++ ++L + D + V
Sbjct: 248 DTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDLV 285
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Length = 223
Score = 68.8 bits (167), Expect = 1e-14
Identities = 33/167 (19%), Positives = 59/167 (35%), Gaps = 16/167 (9%)
Query: 97 CGPGCVFLAACASSDKEEVLNLLKS-GADINTANVDGLTALHQLKRWEESETNRQPSEMG 155
C + S EE+ + + + + D TALH +E ++G
Sbjct: 1 CVSNLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLG 60
Query: 156 NKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALH------------ 203
+ A ++ E V LL GA +N N +G T LH
Sbjct: 61 VPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAV 120
Query: 204 ---QAGADLNFQDYDGWTPLHAAAHWAQREACQILVENFCDMDVKNY 247
+ GA+ + +D+ T +H AA + IL+ ++++
Sbjct: 121 MLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDT 167
Score = 65.4 bits (158), Expect = 2e-13
Identities = 46/230 (20%), Positives = 76/230 (33%), Gaps = 59/230 (25%)
Query: 43 SGCVFLAACASSDKEEVLNLLKS-GADINTANVDGLTALHQVSKS----------ASTLP 91
S + S EE+ + + + + D TALH + +P
Sbjct: 3 SNLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP 62
Query: 92 LHSLNCGPGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQP 151
++ + A ++ E V LL GA +N N +G T LH
Sbjct: 63 VNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHY------------- 109
Query: 152 SEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALH-------- 203
A + + E + LL+ GA+ + + TA+H
Sbjct: 110 --------------------AASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNL 149
Query: 204 -------QAGADLNFQDYDGWTPLHAAAHWAQREACQILVENFCDMDVKN 246
A N QD +G TPLH A + E ++LV + ++N
Sbjct: 150 KMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIEN 199
Score = 63.4 bits (153), Expect = 8e-13
Identities = 33/176 (18%), Positives = 56/176 (31%), Gaps = 42/176 (23%)
Query: 62 LLKSGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLKS 121
LL GA +N N +G T LH + + E + LL+
Sbjct: 89 LLGKGAQVNAVNQNGCTPLHYA-----------------------ASKNRHEIAVMLLEG 125
Query: 122 GADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEV 181
GA+ + + TA+H+ + + I+ + G L ++ E
Sbjct: 126 GANPDAKDHYEATAMHR-AAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEE 184
Query: 182 LNLLKSGADINTANVDGLTALHQAGADLNFQDYDGWTPLHAAAHWAQREACQILVE 237
LL S GA + ++ + TPL A + +VE
Sbjct: 185 AKLLVS-----------------QGASIYIENKEEKTPLQVAKG-GLGLILKRMVE 222
Score = 54.2 bits (129), Expect = 2e-09
Identities = 26/107 (24%), Positives = 42/107 (39%), Gaps = 11/107 (10%)
Query: 42 SSGCVFLAACASSDKEEVLN-LLKSGADINTANVDGLTALHQVSKSASTLPLHSLNCGPG 100
+GC L AS ++ E+ LL+ GA+ + + TA+H+ + + +H L
Sbjct: 101 QNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKA 160
Query: 101 CVFLA----------ACASSDKEEVLNLLKSGADINTANVDGLTALH 137
+ AC EE L+ GA I N + T L
Sbjct: 161 STNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQ 207
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 63.5 bits (153), Expect = 2e-12
Identities = 38/270 (14%), Positives = 75/270 (27%), Gaps = 63/270 (23%)
Query: 17 LKRWEESETNRQP----SEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTA 72
L+R E P ++ N+ + S+ + S +E + ++N
Sbjct: 43 LQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIP 102
Query: 73 -NVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLKSGADINTANVD 131
+ G T LH + ++ E V +L+K G++ +
Sbjct: 103 VDEHGNTPLH-----------------------WLTSIANLELVKHLVKHGSNRLYGDNM 139
Query: 132 GLTALHQLKRWEESETNRQPSEMGNKPKK-----------------IKFSSGCVFLAACA 174
G + L + + + + + + I AA
Sbjct: 140 GESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKY 199
Query: 175 SSDKEEVLNLLKSGADINTANVDGLTALHQA------------------GADLNFQDYDG 216
D + K I + + + + LN QD +G
Sbjct: 200 YLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNG 259
Query: 217 WTPLHAAAHWAQREACQILVENFCDMDVKN 246
T L+ AA L++ D + N
Sbjct: 260 DTCLNIAARLGNISIVDALLDYGADPFIAN 289
Score = 55.1 bits (131), Expect = 1e-09
Identities = 26/194 (13%), Positives = 59/194 (30%), Gaps = 26/194 (13%)
Query: 50 ACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACAS 109
+ ++ E V +L+K G++ + G + L K+ ++ + +
Sbjct: 114 LTSIANLELVKHLVKHGSNRLYGDNMGESCLV---KAVKSVNNYDSGTFEALLDYLYPCL 170
Query: 110 SDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVF 169
++ + + G+T ++ + N+P + +
Sbjct: 171 ILEDSMNRTILHHI----IITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESK 226
Query: 170 LAACASSDKEEVLNLLKS----GADINTANVDGLTALHQA---------------GADLN 210
K+ +L L +N + +G T L+ A GAD
Sbjct: 227 PNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPF 286
Query: 211 FQDYDGWTPLHAAA 224
+ G P+ A
Sbjct: 287 IANKSGLRPVDFGA 300
Score = 42.0 bits (97), Expect = 3e-05
Identities = 26/150 (17%), Positives = 45/150 (30%), Gaps = 19/150 (12%)
Query: 104 LAACASSDKEEVLNLLKS-GADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIK 162
L + S +++ L S + N + L +L E E + +
Sbjct: 10 LTSDFLSSPLKIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEG 69
Query: 163 FSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQAGADLNFQ-DYDGWTPLH 221
SS S +EV + +LN D G TPLH
Sbjct: 70 GSSNQQQQHVSFDSLLQEVNDAFP-----------------NTQLNLNIPVDEHGNTPLH 112
Query: 222 AAAHWAQREACQILVENFCDMDVKNYVVST 251
A E + LV++ + + + +
Sbjct: 113 WLTSIANLELVKHLVKHGSNRLYGDNMGES 142
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor
I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId:
10090]}
Length = 255
Score = 62.4 bits (150), Expect = 3e-12
Identities = 35/194 (18%), Positives = 55/194 (28%), Gaps = 26/194 (13%)
Query: 45 CVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFL 104
AC LL+ D Q ++ +
Sbjct: 80 TALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSH---------APAAV 130
Query: 105 AACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFS 164
+ + + EE + N DG T LH +++E R + G K + +
Sbjct: 131 DSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPT 190
Query: 165 SGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQAGADLNFQDYDGWTPLHAAA 224
G L + VL LL AGAD + Y G TPL +A
Sbjct: 191 CGRTPLHLAVEAQAASVLELLLK-----------------AGADPTARMYGGRTPLGSAL 233
Query: 225 HWAQREACQILVEN 238
++L +
Sbjct: 234 LRPNPILARLLRAH 247
Score = 48.9 bits (115), Expect = 1e-07
Identities = 37/227 (16%), Positives = 57/227 (25%), Gaps = 48/227 (21%)
Query: 50 ACASSDKEEVLNLLKSGAD---INTANVDGLTALH----------QVSKSASTLPLHSLN 96
A + + LL A ++ N G TALH A+ +
Sbjct: 16 AVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAE 75
Query: 97 CGPGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGN 156
G AC LL+ D Q + S
Sbjct: 76 RGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHA--------- 126
Query: 157 KPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQAGADLNFQDY-- 214
+ + + + EE + N DG T LH A + +
Sbjct: 127 ----------PAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRL 176
Query: 215 --------------DGWTPLHAAAHWAQREACQILVENFCDMDVKNY 247
G TPLH A ++L++ D + Y
Sbjct: 177 LRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMY 223
Score = 46.2 bits (108), Expect = 1e-06
Identities = 31/173 (17%), Positives = 41/173 (23%), Gaps = 34/173 (19%)
Query: 75 DGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLKSGAD---INTANVD 131
DG TALH A + + LL A ++ N
Sbjct: 8 DGDTALH-----------------------LAVIHQHEPFLDFLLGFSAGHEYLDLQNDL 44
Query: 132 GLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADI 191
G TALH E+ T + G + AC LL+
Sbjct: 45 GQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSH 104
Query: 192 NTANVDGLTALHQAGADLNFQDYDGWTPLHAAAHWAQREACQILVENFCDMDV 244
D QD T AA +Q D +
Sbjct: 105 PRDASDTYLTQS--------QDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRL 149
Score = 38.1 bits (87), Expect = 5e-04
Identities = 7/38 (18%), Positives = 11/38 (28%)
Query: 209 LNFQDYDGWTPLHAAAHWAQREACQILVENFCDMDVKN 246
+ DG T LH A L+ + +
Sbjct: 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLD 39
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416
{Legionella pneumophila [TaxId: 446]}
Length = 346
Score = 58.8 bits (141), Expect = 8e-11
Identities = 28/280 (10%), Positives = 58/280 (20%), Gaps = 62/280 (22%)
Query: 6 SSSALFKRAEQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDK---EEVLNL 62
+ ++ QL + NR ++ + K S + A + + + L
Sbjct: 53 PGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLL 112
Query: 63 LKSGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLKSG 122
L S + + A A + + L +
Sbjct: 113 LTSDEIVKVIQAENYQAFR-----------------------LAAENGHLHVLNRLCELA 149
Query: 123 ADINTANVD--GLTALHQLKRWEESETNRQPSEMGNKPKK--IKFSSGCVFLAACASSDK 178
A + A + E+ I+ + F A
Sbjct: 150 PTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGH 209
Query: 179 EEVLN-LLKSGADINTA----------------------NVDGLTALHQAGA-------- 207
V+N LL + A + A +
Sbjct: 210 HNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVT 269
Query: 208 -DLNFQDYDGWTPLHAAAHWAQREACQILVENFCDMDVKN 246
Q + L + + L+ +
Sbjct: 270 KSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAP 309
Score = 51.0 bits (121), Expect = 4e-08
Identities = 19/163 (11%), Positives = 34/163 (20%), Gaps = 37/163 (22%)
Query: 99 PGCVFLAACASSDKEEVLNLLKS-GADINTANVDGLTALHQLKRWEESETNRQPSEMGNK 157
+ + + + E+V LL A N + H+
Sbjct: 45 KEAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHK------------KGIKSEV 92
Query: 158 PKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQA------------ 205
+ +GC S + + LL S + + A A
Sbjct: 93 ICFVAAITGCS-------SALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRL 145
Query: 206 ---GADLNFQD--YDGWTPLHAAAHWAQREACQILVENFCDMD 243
+ + AA L E
Sbjct: 146 CELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEA 188
Score = 44.5 bits (104), Expect = 5e-06
Identities = 26/222 (11%), Positives = 47/222 (21%), Gaps = 44/222 (19%)
Query: 47 FLAACASSDKEEVLNLLKSGADINTANVD--GLTALHQVSK------------SASTLPL 92
F A + + L + A + A ++ A T
Sbjct: 130 FRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEAT 189
Query: 93 HSLNCGPGCVFLAACASSDKEEVLN-LLKSGADINTANVDGLTALH---------QLKRW 142
+ F A V+N LL + A + + R
Sbjct: 190 AMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRL 249
Query: 143 EESET-------NRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTAN 195
+E + + F + +++ LL A
Sbjct: 250 KEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAP 309
Query: 196 VDGLTALHQAGADLNFQDYDGWTPLHAAAHWAQREACQILVE 237
D L A + AC +L+
Sbjct: 310 T-------------ATIPGDANELLRLALRLGNQGACALLLS 338
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo
sapiens) [TaxId: 9606]}
Length = 156
Score = 56.7 bits (135), Expect = 9e-11
Identities = 32/149 (21%), Positives = 52/149 (34%), Gaps = 16/149 (10%)
Query: 104 LAACASSDKEEVLNLL-KSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIK 162
A A D +EV LL + + N G TAL + + + + +
Sbjct: 7 SGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQDT 66
Query: 163 FSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQ--------------AGAD 208
+ V AA + + + GAD+N + G +H A +D
Sbjct: 67 SGTSPVHDAARTGFLDTLKVLV-EHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAESD 125
Query: 209 LNFQDYDGWTPLHAAAHWAQREACQILVE 237
L+ +D G TPL A ++ IL
Sbjct: 126 LHRRDARGLTPLELALQRGAQDLVDILQG 154
Score = 27.9 bits (60), Expect = 0.96
Identities = 13/83 (15%), Positives = 21/83 (25%), Gaps = 17/83 (20%)
Query: 165 SGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQAGADLNFQDYDGWTPLHAAA 224
+G A A D +EV LL + + G T L
Sbjct: 2 AGDRLSGAAARGDVQEVRRLLHRE-----------------LVHPDALNRFGKTALQVMM 44
Query: 225 HWAQREACQILVENFCDMDVKNY 247
+ A ++L +
Sbjct: 45 FGSTAIALELLKQGASPNVQDTS 67
Score = 27.1 bits (58), Expect = 1.6
Identities = 24/137 (17%), Positives = 41/137 (29%), Gaps = 42/137 (30%)
Query: 43 SGCVFLAACASSDKEEVLNLL-KSGADINTANVDGLTALHQVSKSASTLPLHSLNCGP-- 99
+G A A D +EV LL + + N G TAL + ++ + L L G
Sbjct: 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASP 61
Query: 100 ---------------------------------------GCVFLAACASSDKEEVLNLLK 120
G + + V++ L
Sbjct: 62 NVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA 121
Query: 121 SGADINTANVDGLTALH 137
+ +D++ + GLT L
Sbjct: 122 AESDLHRRDARGLTPLE 138
Score = 25.5 bits (54), Expect = 4.6
Identities = 8/42 (19%), Positives = 18/42 (42%)
Query: 40 KFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALH 81
+G + + V++ L + +D++ + GLT L
Sbjct: 97 PDGTGALPIHLAVQEGHTAVVSFLAAESDLHRRDARGLTPLE 138
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans
[TaxId: 6239]}
Length = 277
Score = 55.1 bits (131), Expect = 1e-09
Identities = 41/262 (15%), Positives = 70/262 (26%), Gaps = 79/262 (30%)
Query: 48 LAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAAC 107
L A+ + + +I T LH ++ ++S L
Sbjct: 6 LHTEAAGSYAITEPITRESVNIIDPR-HNRTVLHWIASNSSAEKSEDLI----------- 53
Query: 108 ASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGC 167
E + +GAD+N + D T L + G P S
Sbjct: 54 ----VHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERS 109
Query: 168 VFLAACASSDKEEVLNLLKSGA-------------------------------------- 189
A A+ D ++ +L S
Sbjct: 110 ALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKG 169
Query: 190 ---------DINTANVDGLTALHQA----------------GADLNFQDYDGWTPLHAAA 224
++ G TALH A G++ + QD DG TP+ AA
Sbjct: 170 AKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAA 229
Query: 225 HWAQREACQILVENFCDMDVKN 246
+ E L++ ++ +
Sbjct: 230 QEGRIEVVMYLIQQGASVEAVD 251
Score = 49.3 bits (116), Expect = 1e-07
Identities = 19/114 (16%), Positives = 28/114 (24%), Gaps = 17/114 (14%)
Query: 122 GADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEV 181
A ++ G TALH + + K + G + A + EV
Sbjct: 177 AARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEV 236
Query: 182 LNLLKSGADINTANVDGLTALHQAGADLNFQDYDGWTPLHAAAHWAQREACQIL 235
+ L Q GA + D T A I
Sbjct: 237 VMYL-----------------IQQGASVEAVDATDHTARQLAQANNHHNIVDIF 273
Score = 41.6 bits (96), Expect = 3e-05
Identities = 20/101 (19%), Positives = 29/101 (28%), Gaps = 24/101 (23%)
Query: 170 LAACASSDKEEVLNLLKSGADINTANVDGLTALHQA-----------------------G 206
L A+ + + +I T LH G
Sbjct: 6 LHTEAAGSYAITEPITRESVNIIDPR-HNRTVLHWIASNSSAEKSEDLIVHEAKECIAAG 64
Query: 207 ADLNFQDYDGWTPLHAAAHWAQREACQILVENFCDMDVKNY 247
AD+N D D TPL A +R L++ D + N
Sbjct: 65 ADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNK 105
Score = 40.1 bits (92), Expect = 1e-04
Identities = 16/83 (19%), Positives = 29/83 (34%), Gaps = 11/83 (13%)
Query: 66 GADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVF-----------LAACASSDKEE 114
A ++ G TALH ++ ++ + L G + A E
Sbjct: 177 AARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEV 236
Query: 115 VLNLLKSGADINTANVDGLTALH 137
V+ L++ GA + + TA
Sbjct: 237 VMYLIQQGASVEAVDATDHTARQ 259
Score = 35.9 bits (81), Expect = 0.003
Identities = 8/32 (25%), Positives = 13/32 (40%)
Query: 50 ACASSDKEEVLNLLKSGADINTANVDGLTALH 81
A E V+ L++ GA + + TA
Sbjct: 228 AAQEGRIEVVMYLIQQGASVEAVDATDHTARQ 259
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 221
Score = 51.4 bits (121), Expect = 1e-08
Identities = 32/208 (15%), Positives = 54/208 (25%), Gaps = 37/208 (17%)
Query: 50 ACASSDKEEVLNLLK----SGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLA 105
A +K + +++ A +N N T LH + +L L
Sbjct: 9 AIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELR 68
Query: 106 ACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSS 165
+ L + + + K ++
Sbjct: 69 DF-----------------RGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNG 111
Query: 166 GCVFLAACASSDKEEVLNLLKSGADI-NTANVDGLTALH---------------QAGADL 209
A V L+ GAD+ +G TALH + GAD+
Sbjct: 112 HTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADV 171
Query: 210 NFQDYDGWTPLHAAAHWAQREACQILVE 237
N Y G++P Q L +
Sbjct: 172 NRVTYQGYSPYQLTWGRPSTRIQQQLGQ 199
Score = 39.9 bits (91), Expect = 1e-04
Identities = 33/199 (16%), Positives = 55/199 (27%), Gaps = 49/199 (24%)
Query: 75 DGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSDKEEVLNLLK----SGADINTANV 130
DG + LH A +K + +++ A +N N
Sbjct: 1 DGDSFLH-----------------------LAIIHEEKALTMEVIRQVKGDLAFLNFQNN 37
Query: 131 DGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGAD 190
T LH + E G P+ F AC V L +S
Sbjct: 38 LQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTT 97
Query: 191 INTA---------------------NVDGLTALHQAGADL-NFQDYDGWTPLHAAAHWAQ 228
+ + + L GAD+ + +G T LH A
Sbjct: 98 PHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQN 157
Query: 229 REACQILVENFCDMDVKNY 247
+ +L++ D++ Y
Sbjct: 158 PDLVSLLLKCGADVNRVTY 176
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 153
Score = 49.9 bits (117), Expect = 2e-08
Identities = 33/147 (22%), Positives = 50/147 (34%), Gaps = 16/147 (10%)
Query: 104 LAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKF 163
L A + +EV L+ +GA T G + LH ++ T G
Sbjct: 7 LEAARAGQDDEVRILMANGAPFTTDW-LGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTK 65
Query: 164 SSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQAG---------------AD 208
A + V LLK GAD+N ++ +TALH A AD
Sbjct: 66 VDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGAD 125
Query: 209 LNFQDYDGWTPLHAAAHWAQREACQIL 235
++ Q T + + +IL
Sbjct: 126 VHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 29.4 bits (64), Expect = 0.25
Identities = 8/33 (24%), Positives = 11/33 (33%)
Query: 215 DGWTPLHAAAHWAQREACQILVENFCDMDVKNY 247
D L AA Q + +IL+ N
Sbjct: 1 DLGKKLLEAARAGQDDEVRILMANGAPFTTDWL 33
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 229
Score = 51.0 bits (120), Expect = 2e-08
Identities = 18/135 (13%), Positives = 37/135 (27%), Gaps = 19/135 (14%)
Query: 107 CASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSG 166
E L+++GA + + LH+ + +G + G
Sbjct: 113 VGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQG 172
Query: 167 CVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQAGADLNFQDYDGWTPLHAAAHW 226
L + + LL + + GA+ + D G A +
Sbjct: 173 WTPLFHALAEGHGDAAVLL----------------VEKYGAEYDLVDNKGAKAEDVALN- 215
Query: 227 AQREACQILVENFCD 241
+ + + N D
Sbjct: 216 --EQVKKFFLNNVVD 228
Score = 44.8 bits (104), Expect = 3e-06
Identities = 39/216 (18%), Positives = 63/216 (29%), Gaps = 38/216 (17%)
Query: 50 ACASSDKEEVLNLLKS-GADINTANVDGLTALHQ-VSKSASTLPLHSLNCGPGCVFLAAC 107
AC ++ +V LL S + + + DG LH VS A + L+
Sbjct: 7 ACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYP 66
Query: 108 ASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGC 167
S E + + KI
Sbjct: 67 DDSGWTPFHI-------------------ACSVGNLEVVKSLYDRPLKPDLNKITNQGVT 107
Query: 168 VFLAACASSDKEEVLNLLKSGADINTANVDGLTALH----------------QAGADLNF 211
A E L+++GA + + LH + +N+
Sbjct: 108 CLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNW 167
Query: 212 QDYDGWTPLHAAAHWAQREACQILVENF-CDMDVKN 246
QD GWTPL A +A +LVE + + D+ +
Sbjct: 168 QDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVD 203
Score = 38.3 bits (87), Expect = 4e-04
Identities = 16/76 (21%), Positives = 29/76 (38%), Gaps = 17/76 (22%)
Query: 172 ACASSDKEEVLNLLKSGADINTANVDGLTALHQAGADLNFQDYDGWTPLHAAAHWAQREA 231
AC ++ +V LL S + L +D DG PLH + + E
Sbjct: 7 ACMENEFFKVQELLHSK-----------------PSLLLQKDQDGRIPLHWSVSFQAHEI 49
Query: 232 CQILVENFCDMDVKNY 247
L+ ++++ +Y
Sbjct: 50 TSFLLSKMENVNLDDY 65
Score = 34.4 bits (77), Expect = 0.009
Identities = 17/99 (17%), Positives = 30/99 (30%), Gaps = 12/99 (12%)
Query: 51 CASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSLNC----------GPG 100
E L+++GA + + LH+ + S + L G
Sbjct: 113 VGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQG 172
Query: 101 CVFLAACASSDKEEVLNLL--KSGADINTANVDGLTALH 137
L + + LL K GA+ + + G A
Sbjct: 173 WTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAED 211
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 228
Score = 50.6 bits (119), Expect = 3e-08
Identities = 47/215 (21%), Positives = 68/215 (31%), Gaps = 34/215 (15%)
Query: 50 ACASSDKEEVLNLLK----SGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCV--- 102
A + V L+ G +++ N T LH + + L
Sbjct: 10 AVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMAL 69
Query: 103 -------FLAACASSDKEEVLNLLKSGADINTANV----DGLTALHQLKRWEESETNRQP 151
AC + LL S A DGLTALH E ET +
Sbjct: 70 DRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLL 129
Query: 152 SEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKS-GADINTANVDGLTALHQA----- 205
E G + SG L ++ ++ LL GA++N G +ALH A
Sbjct: 130 LERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGL 189
Query: 206 ----------GADLNFQDYDGWTPLHAAAHWAQRE 230
GAD + ++ TPL A +
Sbjct: 190 LPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVID 224
Score = 39.4 bits (90), Expect = 1e-04
Identities = 15/70 (21%), Positives = 21/70 (30%), Gaps = 19/70 (27%)
Query: 197 DGLTALHQA-------------------GADLNFQDYDGWTPLHAAAHWAQREACQILVE 237
DG T LH A G +L+ + TPLH A ++LV
Sbjct: 2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVT 61
Query: 238 NFCDMDVKNY 247
+
Sbjct: 62 AGASPMALDR 71
Score = 39.1 bits (89), Expect = 2e-04
Identities = 12/63 (19%), Positives = 19/63 (30%)
Query: 19 RWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLT 78
+ + G +S +A V L++SGAD + N T
Sbjct: 153 ENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDT 212
Query: 79 ALH 81
L
Sbjct: 213 PLM 215
Score = 34.4 bits (77), Expect = 0.007
Identities = 11/80 (13%), Positives = 17/80 (21%), Gaps = 4/80 (5%)
Query: 172 ACASSDKEEVLNLLK----SGADINTANVDGLTALHQAGADLNFQDYDGWTPLHAAAHWA 227
A + V L+ G +++ N T LH A A+
Sbjct: 10 AVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMAL 69
Query: 228 QREACQILVENFCDMDVKNY 247
R
Sbjct: 70 DRHGQTAAHLACEHRSPTCL 89
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 209
Score = 48.6 bits (114), Expect = 1e-07
Identities = 34/225 (15%), Positives = 56/225 (24%), Gaps = 63/225 (28%)
Query: 56 KEEVLNLLKSGADIN-TANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLAACASSD--- 111
+ + +LL GA++N T + G T+LH ++ A L
Sbjct: 2 AQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLH 61
Query: 112 -----------------------------------------KEEVLNLLKSGADINTANV 130
+ V +L+ + ADIN A+
Sbjct: 62 AAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADN 121
Query: 131 DGLTALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGAD 190
G TALH +E A E LL + A+
Sbjct: 122 SGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFAN 181
Query: 191 INTANVDGLTALHQAGADLNFQDYDGWTPLHAAAHWAQREACQIL 235
D+ P A+ + ++L
Sbjct: 182 REI------------------TDHMDRLPRDVASERLHHDIVRLL 208
Score = 42.5 bits (98), Expect = 2e-05
Identities = 37/186 (19%), Positives = 62/186 (33%), Gaps = 50/186 (26%)
Query: 112 KEEVLNLLKSGADIN-TANVDGLTALH--------------------------------- 137
+ + +LL GA++N T + G T+LH
Sbjct: 2 AQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLH 61
Query: 138 -QLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANV 196
+ + A + + V +L+ + ADIN A+
Sbjct: 62 AAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADN 121
Query: 197 DGLTALHQA---------------GADLNFQDYDGWTPLHAAAHWAQREACQILVENFCD 241
G TALH A A+ + QD TPL AA EA + L++NF +
Sbjct: 122 SGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFAN 181
Query: 242 MDVKNY 247
++ ++
Sbjct: 182 REITDH 187
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 154
Score = 45.7 bits (107), Expect = 7e-07
Identities = 29/154 (18%), Positives = 43/154 (27%), Gaps = 29/154 (18%)
Query: 91 PLHSLNCGPGCVFLAACASSDKEEVLNLLKSGADIN------TANVDGLTALHQLKRWEE 144
LHSL A + D +L G D+ + TALH R
Sbjct: 6 KLHSL--------CEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVR--- 54
Query: 145 SETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQ 204
S + F + DK+ T N + L L +
Sbjct: 55 -------SVDRTSLHIVDFLVQN-----SGNLDKQTGKGSTALHYCCLTDNAECLKLLLR 102
Query: 205 AGADLNFQDYDGWTPLHAAAHWAQREACQILVEN 238
A + + G TPL A ++L +
Sbjct: 103 GKASIEIANESGETPLDIAKRLKHEHCEELLTQA 136
Score = 35.0 bits (79), Expect = 0.003
Identities = 15/82 (18%), Positives = 22/82 (26%), Gaps = 15/82 (18%)
Query: 169 FLAACASSDKEEVLNLLKSGADINTANVDGLTALHQAGADLNFQDYDGWTPLHAAAHWAQ 228
A + D +L G D+ L T LH A
Sbjct: 10 LCEAVKTRDIFGLLQAYADGVDLT------------EKIPLANGHEPDETALHLAVRSVD 57
Query: 229 R---EACQILVENFCDMDVKNY 247
R LV+N ++D +
Sbjct: 58 RTSLHIVDFLVQNSGNLDKQTG 79
Score = 35.0 bits (79), Expect = 0.003
Identities = 22/156 (14%), Positives = 44/156 (28%), Gaps = 26/156 (16%)
Query: 47 FLAACASSDKEEVLNLLKSGADIN------TANVDGLTALHQVSKSASTLPLHSLNCGPG 100
A + D +L G D+ + TALH L +
Sbjct: 10 LCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALH----------LAVRSVDRT 59
Query: 101 CVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKPKK 160
+ V L+++ +++ G TALH + +E + +
Sbjct: 60 SL----------HIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEI 109
Query: 161 IKFSSGCVFLAACASSDKEEVLNLLKSGADINTANV 196
S A + L ++ + ++V
Sbjct: 110 ANESGETPLDIAKRLKHEHCEELLTQALSGRFNSHV 145
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId:
9606]}
Length = 156
Score = 43.7 bits (101), Expect = 3e-06
Identities = 23/149 (15%), Positives = 47/149 (31%), Gaps = 15/149 (10%)
Query: 105 AACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEM---------G 155
+A A D E++ +LL++ ++N N G TAL +K R G
Sbjct: 7 SAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLKDRTG 66
Query: 156 NKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANV------DGLTALHQAGADL 209
+G + + +V G + +++
Sbjct: 67 FAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNV 126
Query: 210 NFQDYDGWTPLHAAAHWAQREACQILVEN 238
+++ G T A + + E ++ N
Sbjct: 127 GHRNHKGDTACDLARLYGRNEVVSLMQAN 155
Score = 32.2 bits (71), Expect = 0.025
Identities = 13/77 (16%), Positives = 22/77 (28%)
Query: 171 AACASSDKEEVLNLLKSGADINTANVDGLTALHQAGADLNFQDYDGWTPLHAAAHWAQRE 230
+A A D E++ +LL++ ++N N G TAL +
Sbjct: 7 SAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLKDRTG 66
Query: 231 ACQILVENFCDMDVKNY 247
I
Sbjct: 67 FAVIHDAARAGFLDTLQ 83
Score = 27.5 bits (59), Expect = 0.96
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 218 TPLHAAAHWAQREACQILVENFCDMDVKN 246
L +AA E L++N +++ +N
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQN 31
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 130
Score = 39.3 bits (90), Expect = 7e-05
Identities = 20/139 (14%), Positives = 42/139 (30%), Gaps = 15/139 (10%)
Query: 99 PGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNRQPSEMGNKP 158
P + L + + + V ++ D + N +G+TALH +E + + G
Sbjct: 1 PLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNV 60
Query: 159 KKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQAGADLNFQDYDGWT 218
A + ++ + L++SGA + + + D
Sbjct: 61 NAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFA---------------MTYSDMQTAA 105
Query: 219 PLHAAAHWAQREACQILVE 237
+ Q L
Sbjct: 106 DKCEEMEEGYTQCSQFLYG 124
Score = 27.3 bits (59), Expect = 1.1
Identities = 20/103 (19%), Positives = 34/103 (33%), Gaps = 11/103 (10%)
Query: 46 VFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFLA 105
+ L + + + V ++ D + N +G+TALH + T + L V A
Sbjct: 4 LLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAA 63
Query: 106 ACASSDKEEVLN----------LLKSGADINTANV-DGLTALH 137
L++SGA + D TA
Sbjct: 64 DSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAAD 106
Score = 24.6 bits (52), Expect = 7.3
Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 15/95 (15%)
Query: 168 VFLAACASSDKEEVLNLLKSGADINTANVDGLTALHQAGADLNFQDY------------- 214
+ L + + + V ++ D + N +G+TALH A + +
Sbjct: 4 LLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAA 63
Query: 215 --DGWTPLHAAAHWAQREACQILVENFCDMDVKNY 247
DGWTPLH AA + C+ LVE+ + Y
Sbjct: 64 DSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTY 98
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 125
Score = 29.2 bits (63), Expect = 0.25
Identities = 6/26 (23%), Positives = 11/26 (42%)
Query: 210 NFQDYDGWTPLHAAAHWAQREACQIL 235
+ +D G P+ A R+ + L
Sbjct: 96 DVRDAWGRLPVDLAEELGHRDVARYL 121
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 118
Score = 28.3 bits (61), Expect = 0.36
Identities = 7/26 (26%), Positives = 13/26 (50%), Gaps = 4/26 (15%)
Query: 212 QDYDGWTPLHAAAHWAQREACQILVE 237
+ DG T L A + +A + L++
Sbjct: 97 KGPDGLTALEATDN----QAIKALLQ 118
>d1vkfa_ c.1.29.1 (A:) Glycerol uptake operon antiterminator-related
protein TM1436 {Thermotoga maritima [TaxId: 2336]}
Length = 172
Score = 27.3 bits (61), Expect = 1.4
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 36 PKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVD 75
PK + G +AA +EE +LK + I+T++
Sbjct: 129 PKVARKIPGRTVIAAGLVETEEEAREILKHVSAISTSSRI 168
Score = 27.3 bits (61), Expect = 1.4
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 158 PKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVD 197
PK + G +AA +EE +LK + I+T++
Sbjct: 129 PKVARKIPGRTVIAAGLVETEEEAREILKHVSAISTSSRI 168
Score = 25.0 bits (55), Expect = 8.5
Identities = 6/22 (27%), Positives = 12/22 (54%)
Query: 110 SDKEEVLNLLKSGADINTANVD 131
+EE +LK + I+T++
Sbjct: 147 ETEEEAREILKHVSAISTSSRI 168
>d1dc1a_ c.52.1.11 (A:) Restriction endonuclease BsobI {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 319
Score = 26.8 bits (59), Expect = 2.9
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 12/81 (14%)
Query: 65 SGAD--INTANVDGLTALHQVSKSASTLPLHSLNCGPGCVFL-AACASSDKEEVLNLLKS 121
+GAD TAN TAL ++ S L P +F+ AA S EE+ + L+S
Sbjct: 244 AGADEHWKTAN----TALTRIRNKFSEKGLS-----PKTIFIGAAIEHSMAEEIWDQLQS 294
Query: 122 GADINTANVDGLTALHQLKRW 142
G+ N+AN+ + L RW
Sbjct: 295 GSLTNSANLTKTEQVGSLCRW 315
>d1x7fa2 c.1.8.12 (A:1-244) Outer surface protein, N-terminal domain
{Bacillus cereus [TaxId: 1396]}
Length = 244
Score = 26.2 bits (58), Expect = 3.4
Identities = 16/92 (17%), Positives = 27/92 (29%), Gaps = 23/92 (25%)
Query: 123 ADIN-------TANVDGLTALHQLK----RWEESETNRQPSEMGNKPKKIKFSSGCVFLA 171
D+ + L+ +L R + ++M N P +K
Sbjct: 68 LDVAPAVFDQLGISYSDLSFFAELGADGIRLDVGFDGLTEAKMTNNPYGLK----IELNV 123
Query: 172 ACASSDKEEVLNLLKSGADINTANVDGLTALH 203
S+D + N+L AN L H
Sbjct: 124 ---SNDIAYLENILSHQ-----ANKSALIGCH 147
Score = 25.1 bits (55), Expect = 7.7
Identities = 12/57 (21%), Positives = 18/57 (31%), Gaps = 12/57 (21%)
Query: 25 TNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADINTANVDGLTALH 81
++M N P +K S+D + N+L AN L H
Sbjct: 103 DGLTEAKMTNNPYGLK----IELNV---SNDIAYLENILSHQ-----ANKSALIGCH 147
>d1jr1a1 c.1.5.1 (A:17-112,A:233-514) Inosine monophosphate
dehydrogenase (IMPDH) {Chinese hamster (Cricetulus
griseus) [TaxId: 10029]}
Length = 378
Score = 25.8 bits (56), Expect = 4.9
Identities = 9/57 (15%), Positives = 17/57 (29%)
Query: 135 ALHQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADI 191
AL + + N K +K + + + NL+ +G D
Sbjct: 128 ALAGVDVVVLDSSQGNSIFQINMIKYMKEKYPNLQVIGGNVVTAAQAKNLIDAGVDA 184
Score = 25.8 bits (56), Expect = 5.9
Identities = 7/55 (12%), Positives = 15/55 (27%)
Query: 15 EQLKRWEESETNRQPSEMGNKPKKIKFSSGCVFLAACASSDKEEVLNLLKSGADI 69
+ + N K +K + + + NL+ +G D
Sbjct: 130 AGVDVVVLDSSQGNSIFQINMIKYMKEKYPNLQVIGGNVVTAAQAKNLIDAGVDA 184
>d2ghra1 c.23.16.8 (A:17-297) Homoserine O-succinyltransferase HTS
(MetA) {Bacillus cereus [TaxId: 1396]}
Length = 281
Score = 25.8 bits (56), Expect = 5.9
Identities = 11/65 (16%), Positives = 20/65 (30%), Gaps = 9/65 (13%)
Query: 190 DINTANVDGLTALHQAGADLNFQDYDGWTPLHAAAHWAQRE---------ACQILVENFC 240
DI DGL L+F++ D W L +++ Q + +
Sbjct: 78 DIENEKFDGLIITGAPVETLSFEEVDYWEELKRIMEYSKTNVTSTLHICWGAQAGLYHHY 137
Query: 241 DMDVK 245
+
Sbjct: 138 GVQKY 142
>d1ifwa_ a.144.1.1 (A:) poly(A) binding protein {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 92
Score = 24.0 bits (52), Expect = 9.2
Identities = 9/39 (23%), Positives = 16/39 (41%)
Query: 111 DKEEVLNLLKSGADINTANVDGLTALHQLKRWEESETNR 149
+EV LL+S + A K+ +E +T +
Sbjct: 53 PPQEVFPLLESDELFEQHYKEASAAYESFKKEQEQQTEQ 91
>d1u6ka1 c.127.1.1 (A:2-283) F420-dependent
methylenetetrahydromethanopterin dehydrogenase (MTD)
{Archaeon Methanopyrus kandleri [TaxId: 2320]}
Length = 282
Score = 24.8 bits (54), Expect = 9.5
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 8/52 (15%)
Query: 194 ANVDGLTALHQAG--ADLNF------QDYDGWTPLHAAAHWAQREACQILVE 237
A V + AL A AD++ QD + + P+ A+AH R+A ++ E
Sbjct: 198 AMVKAMAALEIAENVADVSVEGCFVEQDKERYVPIVASAHEMMRKAAELADE 249
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.313 0.126 0.369
Gapped
Lambda K H
0.267 0.0550 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 851,170
Number of extensions: 35809
Number of successful extensions: 294
Number of sequences better than 10.0: 1
Number of HSP's gapped: 173
Number of HSP's successfully gapped: 98
Length of query: 251
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 168
Effective length of database: 1,268,006
Effective search space: 213025008
Effective search space used: 213025008
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 52 (24.2 bits)