RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9959
(330 letters)
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 50.0 bits (120), Expect = 2e-09
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 211 KPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSI 246
KP+ C+ C F+ L H++ HT E+PHKC +
Sbjct: 4 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 45.4 bits (108), Expect = 1e-07
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 180 SEERPHKCSVCERGFKTIASLQNHI-NTHTGVKPHKCK 216
S +P+ C C +GF L HI HT +PHKC+
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38
Score = 43.1 bits (102), Expect = 8e-07
Identities = 10/36 (27%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 237 THEKPHKCSICDYASVELSKMRNHMRS-HTGERPYQ 271
+ KP+ C C + H++ HT ERP++
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHK 36
Score = 38.1 bits (89), Expect = 3e-05
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 280 EKCWKCELCPYASSSQRHLESHM-LIHTDQKPYLCD 314
K + C+ C S HL H+ +HT ++P+ C
Sbjct: 3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38
Score = 33.8 bits (78), Expect = 0.001
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 157 HMCNYCNYTSPKRYLLARHLKS-HSEERPHKCSV 189
++C C + L H+K H+ ERPHKC V
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 44.9 bits (107), Expect = 1e-07
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGE 267
H+ EKP+ C C A S + H R HTGE
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33
Score = 39.9 bits (94), Expect = 8e-06
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 207 HTGVKPHKCKYCESRFTTSGELVRHVRYKHTHE 239
H+G KP+ C C F+ S LV+H R HT E
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQR-VHTGE 33
Score = 39.5 bits (93), Expect = 1e-05
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 179 HSEERPHKCSVCERGFKTIASLQNHINTHTG 209
HS E+P+ C C + F + L H HTG
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32
Score = 35.7 bits (83), Expect = 3e-04
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 277 HEGEKCWKCELCPYASSSQRHLESHMLIHT 306
H GEK + C C A S L H +HT
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQRVHT 31
Score = 26.8 bits (60), Expect = 0.38
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 304 IHTDQKPYLCDHCD 317
IH+ +KPY C C
Sbjct: 1 IHSGEKPYGCVECG 14
Score = 23.7 bits (52), Expect = 3.9
Identities = 6/26 (23%), Positives = 12/26 (46%)
Query: 157 HMCNYCNYTSPKRYLLARHLKSHSEE 182
+ C C + +L +H + H+ E
Sbjct: 8 YGCVECGKAFSRSSILVQHQRVHTGE 33
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 45.0 bits (107), Expect = 1e-07
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 206 THTGVKPHKCKYCESRFTTSGELVRHVRYKHTHE 239
TH+G KP++C C +RFT SG + H+ KHT
Sbjct: 2 THSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35
Score = 38.4 bits (90), Expect = 3e-05
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGE 267
H+ EKP++C IC + M+ H+ E
Sbjct: 3 HSGEKPYECYICHARFTQSGTMKMHILQKHTE 34
Score = 34.6 bits (80), Expect = 6e-04
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 177 KSHSEERPHKCSVCERGFKTIASLQNHINTHTG 209
++HS E+P++C +C F +++ HI
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT 33
Score = 33.8 bits (78), Expect = 0.001
Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 14/47 (29%)
Query: 262 RSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHML-IHTD 307
R+H+GE+PY +C +C + ++ H+L HT+
Sbjct: 1 RTHSGEKPY-------------ECYICHARFTQSGTMKMHILQKHTE 34
Score = 26.5 bits (59), Expect = 0.48
Identities = 6/14 (42%), Positives = 8/14 (57%)
Query: 304 IHTDQKPYLCDHCD 317
H+ +KPY C C
Sbjct: 2 THSGEKPYECYICH 15
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 44.0 bits (104), Expect = 4e-07
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 173 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTG 209
R E R +KC C + F + L H THTG
Sbjct: 1 GRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37
Score = 42.1 bits (99), Expect = 1e-06
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 230 RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGE 267
R + + +KC C + S + H R+HTGE
Sbjct: 2 RSEW-QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38
Score = 40.5 bits (95), Expect = 5e-06
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHE 239
+ +KC C F+ S +L +H R HT E
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRR-THTGE 38
Score = 37.4 bits (87), Expect = 6e-05
Identities = 10/47 (21%), Positives = 12/47 (25%), Gaps = 13/47 (27%)
Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHT 306
R Y KC+ C + S L H HT
Sbjct: 3 SEWQQRERRRY-------------KCDECGKSFSHSSDLSKHRRTHT 36
Score = 26.7 bits (59), Expect = 0.53
Identities = 4/16 (25%), Positives = 7/16 (43%)
Query: 301 HMLIHTDQKPYLCDHC 316
+++ Y CD C
Sbjct: 3 SEWQQRERRRYKCDEC 18
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 43.1 bits (101), Expect = 1e-06
Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 182 ERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVR 233
++ + C C + F + H++ H G++P+ C C +F LV H++
Sbjct: 1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK 51
Score = 40.4 bits (94), Expect = 9e-06
Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Query: 211 KPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSH 264
K + C+ C FT + RH+ +P+ C +C + HM+ H
Sbjct: 2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGL-RPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 36.6 bits (84), Expect = 2e-04
Identities = 17/67 (25%), Positives = 24/67 (35%), Gaps = 14/67 (20%)
Query: 239 EKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHL 298
+K + C C + S+ HM H G R + C +C + HL
Sbjct: 1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLR-------------PYGCGVCGKKFKMKHHL 46
Query: 299 ESHMLIH 305
HM IH
Sbjct: 47 VGHMKIH 53
Score = 35.0 bits (80), Expect = 6e-04
Identities = 14/46 (30%), Positives = 20/46 (43%)
Query: 162 CNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTH 207
C + + RH+ H RP+ C VC + FK L H+ H
Sbjct: 8 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 29.7 bits (66), Expect = 0.052
Identities = 10/38 (26%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 280 EKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCD 317
+K + C+ C + + + + HM +H +PY C C
Sbjct: 1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCG 37
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 41.6 bits (98), Expect = 2e-06
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 206 THTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEK 240
THTG KP+ C +C+ F L H + ++
Sbjct: 2 THTGEKPYACSHCDKTFRQKQLLDMHFK-RYHDPN 35
Score = 41.2 bits (97), Expect = 3e-06
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGE 267
HT EKP+ CS CD + + H + +
Sbjct: 3 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP 34
Score = 37.3 bits (87), Expect = 7e-05
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 177 KSHSEERPHKCSVCERGFKTIASLQNHINTHTG 209
++H+ E+P+ CS C++ F+ L H +
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33
Score = 37.0 bits (86), Expect = 1e-04
Identities = 12/48 (25%), Positives = 18/48 (37%), Gaps = 13/48 (27%)
Query: 262 RSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQK 309
R+HTGE+PY C C ++ L+ H + D
Sbjct: 1 RTHTGEKPY-------------ACSHCDKTFRQKQLLDMHFKRYHDPN 35
Score = 25.8 bits (57), Expect = 0.81
Identities = 9/14 (64%), Positives = 10/14 (71%)
Query: 304 IHTDQKPYLCDHCD 317
HT +KPY C HCD
Sbjct: 2 THTGEKPYACSHCD 15
Score = 24.2 bits (53), Expect = 2.8
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 157 HMCNYCNYTSPKRYLLARHLKSHSEE 182
+ C++C+ T ++ LL H K + +
Sbjct: 9 YACSHCDKTFRQKQLLDMHFKRYHDP 34
>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 47
Score = 40.7 bits (95), Expect = 5e-06
Identities = 9/45 (20%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Query: 226 GELVRHVRYKHTHEKPHKCSICD--YASVELSKMRNHMRSHTGER 268
G + ++V K +K +C +R+H+++H +R
Sbjct: 5 GSIDKYV--KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 33.8 bits (77), Expect = 0.002
Identities = 9/46 (19%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 168 KRYLLARHLKSHSEERPHKCSVCERG--FKTIASLQNHINTHTGVK 211
R + +++K ++ +C FK ++++HI TH +
Sbjct: 3 PRGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 32.6 bits (74), Expect = 0.005
Identities = 6/44 (13%), Positives = 16/44 (36%), Gaps = 4/44 (9%)
Query: 199 SLQNHINTHTGVKPHKCKYCES--RFTTSGELVRHVRYKHTHEK 240
S+ ++ K +C + F + H++ H ++
Sbjct: 6 SIDKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQ-THLEDR 47
Score = 30.7 bits (69), Expect = 0.020
Identities = 4/55 (7%), Positives = 18/55 (32%), Gaps = 12/55 (21%)
Query: 255 SKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQK 309
+ +++ ++ ++ C + ++ SH+ H + +
Sbjct: 5 GSIDKYVK-EMPDKTFECLFPG-----------CTKTFKRRYNIRSHIQTHLEDR 47
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 37
Score = 39.7 bits (93), Expect = 1e-05
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 203 HINTHTGVKPHKCKYCESRFTTSGELVRHVR 233
TG+KP +C C+ F+ S L H +
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRK 32
Score = 37.4 bits (87), Expect = 7e-05
Identities = 11/47 (23%), Positives = 15/47 (31%), Gaps = 13/47 (27%)
Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHT 306
R TG +P+ +C C + S HL H H
Sbjct: 2 STRGSTGIKPF-------------QCPDCDRSFSRSDHLALHRKRHM 35
Score = 37.0 bits (86), Expect = 8e-05
Identities = 9/36 (25%), Positives = 14/36 (38%)
Query: 175 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGV 210
+ + +P +C C+R F L H H V
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37
Score = 35.5 bits (82), Expect = 4e-04
Identities = 9/36 (25%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Query: 231 HVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTG 266
R T KP +C CD + + H + H
Sbjct: 2 STR-GSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36
Score = 25.5 bits (56), Expect = 1.2
Identities = 6/17 (35%), Positives = 7/17 (41%)
Query: 301 HMLIHTDQKPYLCDHCD 317
T KP+ C CD
Sbjct: 2 STRGSTGIKPFQCPDCD 18
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 29
Score = 39.1 bits (92), Expect = 1e-05
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 240 KPHKCSICDYASVELSKMRNHMRSHTGER 268
+ C +C A ++ H RSHT E+
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 36.4 bits (85), Expect = 1e-04
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 211 KPHKCKYCESRFTTSGELVRHVRYKHTHEK 240
+ C+ C F L RH R HT+EK
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYR-SHTNEK 29
Score = 36.1 bits (84), Expect = 2e-04
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 183 RPHKCSVCERGFKTIASLQNHINTHTGVK 211
R C VC R F L+ H +HT K
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 29.9 bits (68), Expect = 0.028
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 281 KCWKCELCPYASSSQRHLESHMLIHTDQK 309
+ + CE+C A + Q HL+ H HT++K
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 24.5 bits (54), Expect = 2.3
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 157 HMCNYCNYTSPKRYLLARHLKSHSEER 183
+C C ++ L RH +SH+ E+
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEK 29
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 38.9 bits (91), Expect = 2e-05
Identities = 5/29 (17%), Positives = 12/29 (41%)
Query: 240 KPHKCSICDYASVELSKMRNHMRSHTGER 268
K C C + + H+++H ++
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 34.6 bits (80), Expect = 5e-04
Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 211 KPHKCKYCESRFTTSGELVRHVRYKHTHEK 240
K C C RF S L +H++ H ++K
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIK-THQNKK 29
Score = 33.1 bits (76), Expect = 0.002
Identities = 9/29 (31%), Positives = 11/29 (37%)
Query: 183 RPHKCSVCERGFKTIASLQNHINTHTGVK 211
+ C C + F L HI TH K
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 30.4 bits (69), Expect = 0.016
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 281 KCWKCELCPYASSSQRHLESHMLIHTDQK 309
K + C CP HL H+ H ++K
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 25.0 bits (55), Expect = 1.5
Identities = 6/27 (22%), Positives = 13/27 (48%)
Query: 157 HMCNYCNYTSPKRYLLARHLKSHSEER 183
C C + L++H+K+H ++
Sbjct: 3 FACPECPKRFMRSDHLSKHIKTHQNKK 29
>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 37.8 bits (88), Expect = 4e-05
Identities = 6/32 (18%), Positives = 14/32 (43%)
Query: 186 KCSVCERGFKTIASLQNHINTHTGVKPHKCKY 217
C + F L+ H+ H+ + + C++
Sbjct: 5 PEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36
Score = 34.7 bits (80), Expect = 5e-04
Identities = 10/34 (29%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 281 KCWKCELCPYASSSQRHLESHMLIHTDQKPYLCD 314
C C + + ++HL+ HM +H+D + Y+C+
Sbjct: 3 SC-PEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35
Score = 33.9 bits (78), Expect = 0.001
Identities = 6/29 (20%), Positives = 11/29 (37%)
Query: 243 KCSICDYASVELSKMRNHMRSHTGERPYQ 271
C + ++ HM+ H+ R Y
Sbjct: 5 PEPACGKSFNFKKHLKEHMKLHSDTRDYI 33
Score = 33.5 bits (77), Expect = 0.002
Identities = 7/34 (20%), Positives = 12/34 (35%), Gaps = 3/34 (8%)
Query: 213 HKCKY--CESRFTTSGELVRHVRYKHTHEKPHKC 244
C C F L H++ H+ + + C
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMK-LHSDTRDYIC 34
Score = 30.1 bits (68), Expect = 0.023
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Query: 156 AHMCNY--CNYTSPKRYLLARHLKSHSEERPHKC 187
+ C C + + L H+K HS+ R + C
Sbjct: 1 SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 37.2 bits (87), Expect = 6e-05
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 239 EKPHKCSICDYASVELSKMRNHMRSHTG 266
+KP +C IC + H+R+HTG
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 36.4 bits (85), Expect = 1e-04
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 182 ERPHKCSVCERGFKTIASLQNHINTHTG 209
++P +C +C R F L HI THTG
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 31.4 bits (72), Expect = 0.007
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 211 KPHKCKYCESRFTTSGELVRHVRYKHT 237
KP +C+ C F+ S L H+R HT
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIR-THT 27
Score = 30.3 bits (69), Expect = 0.021
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 280 EKCWKCELCPYASSSQRHLESHMLIHT 306
+K ++C +C S HL +H+ HT
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHIRTHT 27
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 35
Score = 36.7 bits (85), Expect = 1e-04
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 207 HTGVKPHKCKYCESRFTTSGELVRHVRYKHTHE 239
+G +P C+ C S FTT RH++ HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLK-VHTDT 33
Score = 36.7 bits (85), Expect = 1e-04
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 236 HTHEKPHKCSICDYASVELSKMRNHMRSHTGE 267
+ ++P C IC A + H++ HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33
Score = 35.9 bits (83), Expect = 2e-04
Identities = 8/31 (25%), Positives = 18/31 (58%)
Query: 277 HEGEKCWKCELCPYASSSQRHLESHMLIHTD 307
G++ + C +C A +++ + H+ +HTD
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD 32
Score = 34.3 bits (79), Expect = 7e-04
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 179 HSEERPHKCSVCERGFKTIASLQNHINTHTG 209
S +RP C +C F T A+ H+ HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD 32
Score = 23.2 bits (50), Expect = 7.3
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 157 HMCNYCNYTSPKRYLLARHLKSHSEE 182
+C C + ARHLK H++
Sbjct: 8 FVCRICLSAFTTKANCARHLKVHTDT 33
>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 35.4 bits (81), Expect = 3e-04
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 239 EKPHKCSICDYASVELSKMRNHMRSHTGE 267
E+P KC IC YAS S++ H+RSHTG+
Sbjct: 1 ERPFKCQICPYASRNSSQLTVHLRSHTGD 29
Score = 28.9 bits (64), Expect = 0.075
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 280 EKCWKCELCPYASSSQRHLESHMLIHT 306
E+ +KC++CPYAS + L H+ HT
Sbjct: 1 ERPFKCQICPYASRNSSQLTVHLRSHT 27
Score = 26.9 bits (59), Expect = 0.33
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 182 ERPHKCSVCERGFKTIASLQNHINTHTG 209
ERP KC +C + + L H+ +HTG
Sbjct: 1 ERPFKCQICPYASRNSSQLTVHLRSHTG 28
>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 31
Score = 34.6 bits (80), Expect = 6e-04
Identities = 9/31 (29%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 240 KPHKCSI--CDYASVELSKMRNHMRSHTGER 268
+P C+ C +++ H R+HTGE+
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 31.5 bits (72), Expect = 0.007
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Query: 211 KPHKCKY--CESRFTTSGELVRHVRYKHTHEK 240
+P C + C RFT S EL RH R HT EK
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKR-THTGEK 31
Score = 31.1 bits (71), Expect = 0.011
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 183 RPHKCSV--CERGFKTIASLQNHINTHTGVK 211
RP C+ C + F LQ H THTG K
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 25.0 bits (55), Expect = 1.8
Identities = 7/29 (24%), Positives = 10/29 (34%), Gaps = 1/29 (3%)
Query: 281 KCWKCELCPYASSSQRHLESHMLIHTDQK 309
C C + L+ H HT +K
Sbjct: 4 MCTWSY-CGKRFTRSDELQRHKRTHTGEK 31
>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 32.8 bits (74), Expect = 0.002
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 240 KPHKCSICDYASVELSKMRNHMRSHT 265
KP+KC CDYA+ + S + H+R H+
Sbjct: 2 KPYKCKTCDYAAADSSSLNKHLRIHS 27
Score = 26.7 bits (58), Expect = 0.34
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 210 VKPHKCKYCESRFTTSGELVRHVR 233
VKP+KCK C+ S L +H+R
Sbjct: 1 VKPYKCKTCDYAAADSSSLNKHLR 24
Score = 25.9 bits (56), Expect = 0.75
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 281 KCWKCELCPYASSSQRHLESHMLIHTD 307
K +KC+ C YA++ L H+ IH+D
Sbjct: 2 KPYKCKTCDYAAADSSSLNKHLRIHSD 28
>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 30
Score = 32.3 bits (74), Expect = 0.004
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 240 KPHKCSI--CDYASVELSKMRNHMRSHTGE 267
KPHKC+ C + L ++ H+RSHTGE
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 30.4 bits (69), Expect = 0.016
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Query: 211 KPHKCKY--CESRFTTSGELVRHVRYKHTHE 239
KPHKC + C ++ L H+R HT E
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLR-SHTGE 30
Score = 29.6 bits (67), Expect = 0.029
Identities = 10/29 (34%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Query: 183 RPHKCSV--CERGFKTIASLQNHINTHTG 209
+PHKC+ C + + + +L+ H+ +HTG
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTG 29
Score = 22.7 bits (49), Expect = 9.2
Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 281 KCWKC--ELCPYASSSQRHLESHMLIHT 306
K KC E C + S +L++H+ HT
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHT 28
>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 31.9 bits (73), Expect = 0.004
Identities = 8/29 (27%), Positives = 13/29 (44%), Gaps = 3/29 (10%)
Query: 211 KPHKCKY--CESRFTTSGELVRHVRYKHT 237
+P+ C + C +F S L H+ H
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHIL-THA 28
Score = 29.2 bits (66), Expect = 0.049
Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 183 RPHKCSV--CERGFKTIASLQNHINTHT 208
RP+ C C + F +L++HI TH
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 26.5 bits (59), Expect = 0.42
Identities = 5/28 (17%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 240 KPHKCSI--CDYASVELSKMRNHMRSHT 265
+P+ C C+ + + +++H+ +H
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 26
Score = 31.6 bits (71), Expect = 0.006
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 241 PHKCSICDYASVELSKMRNHMRSHTG 266
PHKC +C K++ HMR HTG
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCHTG 26
Score = 28.5 bits (63), Expect = 0.097
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 184 PHKCSVCERGFKTIASLQNHINTHTG 209
PHKC VC + F L+ H+ HTG
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCHTG 26
Score = 22.7 bits (48), Expect = 8.6
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 212 PHKCKYCESRFTTSGELVRHVR 233
PHKC+ C F+ +L H+R
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMR 22
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 32
Score = 30.4 bits (69), Expect = 0.020
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Query: 182 ERPHKCSV--CERGFKTIASLQNHINTHTG 209
+RP+ C C++ F L H +H
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE 30
Score = 30.0 bits (68), Expect = 0.022
Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 239 EKPHKCSI--CDYASVELSKMRNHMRSHTGE 267
++P+ C CD A V + H +SH +
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 30.0 bits (68), Expect = 0.029
Identities = 8/31 (25%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Query: 211 KPHKCKY--CESRFTTSGELVRHVRYKHTHE 239
+P+ C + C+ F + +L+RH + H +
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKK-SHQEK 31
Score = 23.8 bits (52), Expect = 3.8
Identities = 6/31 (19%), Positives = 11/31 (35%), Gaps = 2/31 (6%)
Query: 280 EKCWKC--ELCPYASSSQRHLESHMLIHTDQ 308
++ + C C A L H H ++
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 29
Score = 30.0 bits (68), Expect = 0.024
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 183 RPHKCSV--CERGFKTIASLQNHINTHTG 209
RP+ C V C+R F A L HI HTG
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 30.0 bits (68), Expect = 0.026
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Query: 211 KPHKCKY--CESRFTTSGELVRHVRYKHT 237
+P+ C C+ RF+ S +L RH+R HT
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIR-IHT 28
Score = 28.8 bits (65), Expect = 0.057
Identities = 9/29 (31%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 240 KPHKCSI--CDYASVELSKMRNHMRSHTG 266
+P+ C + CD + + H+R HTG
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 67
Score = 30.8 bits (70), Expect = 0.027
Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 4/30 (13%)
Query: 185 HKCSVCERGFKTIASLQNHINTHTGVKPHK 214
H+C C R F +L+ H + K HK
Sbjct: 16 HRCLACARYFIDSTNLKTHFRS----KDHK 41
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 37
Score = 29.3 bits (66), Expect = 0.046
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 181 EERPHKCSVCERGFKTIASLQNHINTH 207
R + CS C+R F++ +L H+N H
Sbjct: 2 PPRSYTCSFCKREFRSAQALGGHMNVH 28
Score = 24.7 bits (54), Expect = 2.4
Identities = 6/30 (20%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 211 KPHKCKYCESRFTTSGELVRHVRYKHTHEK 240
+ + C +C+ F ++ L H+ H ++
Sbjct: 4 RSYTCSFCKREFRSAQALGGHMN-VHRRDR 32
Score = 23.5 bits (51), Expect = 6.7
Identities = 6/27 (22%), Positives = 11/27 (40%)
Query: 157 HMCNYCNYTSPKRYLLARHLKSHSEER 183
+ C++C L H+ H +R
Sbjct: 6 YTCSFCKREFRSAQALGGHMNVHRRDR 32
Score = 23.1 bits (50), Expect = 7.5
Identities = 7/29 (24%), Positives = 11/29 (37%)
Query: 240 KPHKCSICDYASVELSKMRNHMRSHTGER 268
+ + CS C + HM H +R
Sbjct: 4 RSYTCSFCKREFRSAQALGGHMNVHRRDR 32
>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 29.4 bits (65), Expect = 0.048
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 211 KPHKCKYCESRFTTSGELVRHVRYKHTHEK 240
K ++C+YCE R S L H++ KH+ EK
Sbjct: 1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK 30
Score = 23.2 bits (49), Expect = 6.3
Identities = 6/24 (25%), Positives = 16/24 (66%)
Query: 240 KPHKCSICDYASVELSKMRNHMRS 263
K ++C C++ S + S ++ H+++
Sbjct: 1 KTYQCQYCEFRSADSSNLKTHIKT 24
>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 28.5 bits (64), Expect = 0.086
Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 240 KPHKCSI--CDYASVELSKMRNHMRSHTGE 267
KP +C+ C +R H+R HTG+
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 27.7 bits (62), Expect = 0.16
Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 183 RPHKCSV--CERGFKTIASLQNHINTHTG 209
+P +C+ C + F +L+ H+ HTG
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG 29
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 26
Score = 28.3 bits (64), Expect = 0.090
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 211 KPHKCKYCESRFTTSGELVRHVRYKHT 237
KP+KC C F+ + L+ H R HT
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRI-HT 26
Score = 28.3 bits (64), Expect = 0.091
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 183 RPHKCSVCERGFKTIASLQNHINTHT 208
+P+KC C + F + L NH HT
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIHT 26
Score = 26.0 bits (58), Expect = 0.54
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 240 KPHKCSICDYASVELSKMRNHMRSHT 265
KP+KC C A + S + NH R HT
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIHT 26
Score = 23.3 bits (51), Expect = 5.0
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 281 KCWKCELCPYASSSQRHLESHMLIHT 306
K +KC C A S L +H IHT
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIHT 26
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 35
Score = 28.5 bits (63), Expect = 0.099
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 285 CELCPYASSSQRHLESHMLIHTDQKPY 311
CE+C HL H L H+ +KPY
Sbjct: 8 CEICGKIFRDVYHLNRHKLSHSGEKPY 34
Score = 26.9 bits (59), Expect = 0.31
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 240 KPHKCSICDYASVELSKMRNHMRSHTGERPY 270
K C IC ++ + H SH+GE+PY
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY 34
Score = 25.4 bits (55), Expect = 1.4
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 183 RPHKCSVCERGFKTIASLQNHINTHTGVKPH 213
+ C +C + F+ + L H +H+G KP+
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY 34
Score = 23.9 bits (51), Expect = 4.1
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 157 HMCNYCNYTSPKRYLLARHLKSHSEERPH 185
C C Y L RH SHS E+P+
Sbjct: 6 VACEICGKIFRDVYHLNRHKLSHSGEKPY 34
>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 33
Score = 27.4 bits (61), Expect = 0.22
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 256 KMRNHMRSHTGE 267
+ HMR HTGE
Sbjct: 22 MLVVHMRRHTGE 33
Score = 24.7 bits (54), Expect = 2.1
Identities = 10/23 (43%), Positives = 11/23 (47%)
Query: 187 CSVCERGFKTIASLQNHINTHTG 209
CS R FK L H+ HTG
Sbjct: 10 CSRELRPFKAQYMLVVHMRRHTG 32
>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 27.2 bits (60), Expect = 0.25
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 212 PHKCKYCESRFTTSGELVRHVRYKHTHEK 240
P+ C YC F T G L +H++ K H K
Sbjct: 1 PYHCTYCNFSFKTKGNLTKHMKSK-AHSK 28
>d1dofa_ a.127.1.1 (A:) Adenylosuccinate lyase {Archaeon Pyrobaculum
aerophilum [TaxId: 13773]}
Length = 402
Score = 30.3 bits (67), Expect = 0.33
Identities = 11/212 (5%), Positives = 47/212 (22%), Gaps = 6/212 (2%)
Query: 122 EVDPIGEEAPSTIEE---DVDEKPKLSKLNKKQVVAPAHMCNYCNYTSPKRYLLARHLKS 178
E+ + + DE +L + +++ + + Y +
Sbjct: 40 ELGVAERGCCEKVNKASVSADEVYRLERETGHDILSLVLLLEQKSGCRYVHYGATSNDII 99
Query: 179 HSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTH 238
+ + ++ + + + + + + ++ + +
Sbjct: 100 DTAWALLIRRALAAVKEKARAVGDQLASMARKYKTLEMVGRTHGQWAEPITLGFKFANYY 159
Query: 239 EKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHL 298
+ + + E + + T +L + L +
Sbjct: 160 YELYIACRQLALAEEFIRAKIGGAVGTMASWGELGLEVRRR---VAERLGLPHHVITTQV 216
Query: 299 ESHMLIHTDQKPYLCDHCDQIRILICVIIAIR 330
R+ + + R
Sbjct: 217 APRESFAVLASALALMAAVFERLAVEIRELSR 248
>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 26.9 bits (59), Expect = 0.36
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 242 HKCSICDYASVELSKMRNHMRSHTGE 267
H C+ C A VE SK++ H HTGE
Sbjct: 3 HVCAECGKAFVESSKLKRHQLVHTGE 28
Score = 24.6 bits (53), Expect = 2.3
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 183 RPHKCSVCERGFKTIASLQNHINTHTG 209
R H C+ C + F + L+ H HTG
Sbjct: 1 RVHVCAECGKAFVESSKLKRHQLVHTG 27
>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 28
Score = 26.4 bits (58), Expect = 0.47
Identities = 7/27 (25%), Positives = 17/27 (62%)
Query: 157 HMCNYCNYTSPKRYLLARHLKSHSEER 183
++C C + K +L +H+++H++ R
Sbjct: 2 YICEECGIRAKKPSMLKKHIRTHTDVR 28
Score = 25.2 bits (55), Expect = 1.4
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 244 CSICDYASVELSKMRNHMRSHTGER 268
C C + + S ++ H+R+HT R
Sbjct: 4 CEECGIRAKKPSMLKKHIRTHTDVR 28
Score = 23.3 bits (50), Expect = 5.4
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 187 CSVCERGFKTIASLQNHINTHTGVK 211
C C K + L+ HI THT V+
Sbjct: 4 CEECGIRAKKPSMLKKHIRTHTDVR 28
>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 44
Score = 26.2 bits (57), Expect = 0.69
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 208 TGVKPHKCKYCESRFTTSGELVRHV 232
TG+KP++C C RF RHV
Sbjct: 1 TGIKPYECNICAKRFMWRDSFHRHV 25
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 32
Score = 25.8 bits (56), Expect = 0.85
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 239 EKPHKCSICDYASVELSKMRNHMRSHTG 266
EKP+ C +C +M H+RSH G
Sbjct: 1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG 28
Score = 25.0 bits (54), Expect = 1.5
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 182 ERPHKCSVCERGFKTIASLQNHINTHTG 209
E+P+ C VC FK + H+ +H G
Sbjct: 1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG 28
>d1rqga1 a.27.1.1 (A:397-606) Methionyl-tRNA synthetase (MetRS)
{Pyrococcus abyssi [TaxId: 29292]}
Length = 210
Score = 28.3 bits (62), Expect = 1.0
Identities = 15/101 (14%), Positives = 35/101 (34%), Gaps = 17/101 (16%)
Query: 52 DINPDPEHVEMKKPQPRPKPKPLSKKLTKSEEEDLTVYDFEEVDEVDPIGEEAPSSEEED 111
D E E+ KP+ L KK+T + ++ + + P
Sbjct: 126 DEVKRWEFRELPAGHKVRKPEILFKKVTDDQIIYF---------ILNYMAKGNPEGAR-- 174
Query: 112 LTVYDFEEVDEVDPIGEEAPSTIEEDVDEKPKLSKLNKKQV 152
+ + + + ++V + + E+ DE + + K +
Sbjct: 175 ILLDKYYKREDVIRVAK------EKFGDEAEVVLRRVYKDI 209
>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 30
Score = 25.4 bits (55), Expect = 1.2
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 183 RPHKCSV--CERGFKTIASLQNHINTHTG 209
+P C CE+GF ++ L H THTG
Sbjct: 1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTG 29
>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 24.8 bits (54), Expect = 1.9
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 211 KPHKCKYCESRFTTSGELVRHVR 233
KP C C +F S E RH +
Sbjct: 2 KPFACDICGRKFARSDERKRHTK 24
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 30
Score = 24.3 bits (52), Expect = 2.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 239 EKPHKCSICDYASVELSKMRNHMRSHTGE 267
E+ CS+C ++R HM SHTGE
Sbjct: 2 EQVFTCSVCQETFRRRMELRLHMVSHTGE 30
Score = 24.3 bits (52), Expect = 3.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 182 ERPHKCSVCERGFKTIASLQNHINTHTG 209
E+ CSVC+ F+ L+ H+ +HTG
Sbjct: 2 EQVFTCSVCQETFRRRMELRLHMVSHTG 29
>d1r79a_ g.49.1.1 (A:) Diacylglycerol kinase delta {Human (Homo
sapiens) [TaxId: 9606]}
Length = 84
Score = 25.4 bits (55), Expect = 3.2
Identities = 7/40 (17%), Positives = 14/40 (35%)
Query: 175 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHK 214
+ KC+VC++ ++ LQ+ H
Sbjct: 29 QWLEGNLPVSAKCTVCDKTCGSVLRLQDWRCLWCKAMVHT 68
>d1prxa_ c.47.1.10 (A:) 1-Cys peroxiredoxin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 220
Score = 26.3 bits (57), Expect = 4.4
Identities = 10/93 (10%), Positives = 25/93 (26%), Gaps = 7/93 (7%)
Query: 126 IGEEAPSTIEEDVDEKPKLSKLNKKQVVA----PAHMCNYCNYTSPKRYLLARHLKSHSE 181
+G+ AP+ + + P C + LA +
Sbjct: 3 LGDVAPNFEANTTVGRIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNV 62
Query: 182 ERPHKCSVCERGFKTIASLQNHINTHTGVKPHK 214
+ ++ + + IN + +P +
Sbjct: 63 KL---IALSIDSVEDHLAWSKDINAYNSEEPTE 92
>d1vlia2 c.1.10.6 (A:2-296) Spore coat polysaccharide biosynthesis
protein SpsE, N-terminal domain {Bacillus subtilis
[TaxId: 1423]}
Length = 295
Score = 26.5 bits (57), Expect = 5.3
Identities = 13/180 (7%), Positives = 39/180 (21%), Gaps = 6/180 (3%)
Query: 143 KLSKLNKKQVVAPAHMCNY---CNYTSPKRYLLARHLKSHSEERPHKCSVCERGFKTIAS 199
K ++ S + + + + ++
Sbjct: 49 KFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYCREKQVIFLSTV 108
Query: 200 LQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRN 259
S L+++V + +P S ++ +
Sbjct: 109 CDEGSADLLQSTSPSAFKIASYEINHLPLLKYVARLN---RPMIFSTAGAEISDVHEAWR 165
Query: 260 HMRSHTGERPYQLHCKSHEGEKCWKCELCPYASSSQRHLESHMLIHTDQKPYLCDHCDQI 319
+R+ + +HC + L + E+ + + C +
Sbjct: 166 TIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPEAVIGFSDHSEHPTEAPCAAV 225
>d1umha_ b.18.1.21 (A:) F-box only protein 2 {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 184
Score = 26.0 bits (57), Expect = 5.7
Identities = 10/39 (25%), Positives = 15/39 (38%)
Query: 255 SKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPYASS 293
+ RN +R+ GE + G WK E P +
Sbjct: 9 KRRRNLLRNPCGEEDLEGWSDVEHGGDGWKVEELPGDNG 47
>d1ogla_ a.204.1.1 (A:) Type II deoxyuridine triphosphatase
{Trypanosoma cruzi [TaxId: 5693]}
Length = 270
Score = 26.0 bits (56), Expect = 6.3
Identities = 8/46 (17%), Positives = 18/46 (39%), Gaps = 4/46 (8%)
Query: 195 KTIASLQNHINTHTGVKPHKCKYCESRF----TTSGELVRHVRYKH 236
++A LQ+ +N + ++ + S EL+ +K
Sbjct: 8 NSLAHLQDGLNIFMDPDWRQIRHVDDWALAITMESAELIDSYPWKW 53
>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 75
Score = 24.3 bits (52), Expect = 6.9
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 206 THTGVKPHKCKYCESRFTTSGELVRHV 232
++CK+C+S+ ++ EL H+
Sbjct: 12 PRLQNSTYQCKHCDSKLQSTAELTSHL 38
Score = 24.3 bits (52), Expect = 7.1
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 185 HKCSVCERGFKTIASLQNHINTH 207
++C C+ ++ A L +H+N H
Sbjct: 19 YQCKHCDSKLQSTAELTSHLNIH 41
>d1omwa2 b.55.1.1 (A:550-668) G-protein coupled receptor kinase 2
(beta-adrenergic receptor kinase 1) {Cow (Bos taurus)
[TaxId: 9913]}
Length = 119
Score = 25.0 bits (53), Expect = 7.9
Identities = 10/70 (14%), Positives = 22/70 (31%)
Query: 231 HVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQLHCKSHEGEKCWKCELCPY 290
+ I ++ + + + G + + L C S WK EL
Sbjct: 42 RGEGEAPQSLLTMEEIQSVEETQIKERKCLLLKIRGGKQFVLQCDSDPELVQWKKELRDA 101
Query: 291 ASSSQRHLES 300
+Q+ ++
Sbjct: 102 YREAQQLVQR 111
>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId:
8355]}
Length = 26
Score = 22.8 bits (48), Expect = 7.9
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 242 HKCSICDYASVELSKMRNHMRSH 264
+KC +C+ + VE S + H R H
Sbjct: 1 YKCGLCERSFVEKSALSRHQRVH 23
Score = 22.8 bits (48), Expect = 8.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 185 HKCSVCERGFKTIASLQNHINTH 207
+KC +CER F ++L H H
Sbjct: 1 YKCGLCERSFVEKSALSRHQRVH 23
>d1oywa3 c.37.1.19 (A:207-406) RecQ helicase domain {Escherichia
coli [TaxId: 562]}
Length = 200
Score = 25.4 bits (54), Expect = 8.8
Identities = 6/33 (18%), Positives = 13/33 (39%)
Query: 158 MCNYCNYTSPKRYLLARHLKSHSEERPHKCSVC 190
M + + +R +L + +E C +C
Sbjct: 165 MGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDIC 197
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.314 0.131 0.395
Gapped
Lambda K H
0.267 0.0618 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,249,404
Number of extensions: 61148
Number of successful extensions: 403
Number of sequences better than 10.0: 1
Number of HSP's gapped: 383
Number of HSP's successfully gapped: 178
Length of query: 330
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 244
Effective length of database: 1,226,816
Effective search space: 299343104
Effective search space used: 299343104
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 53 (24.4 bits)